Query 008636
Match_columns 558
No_of_seqs 176 out of 2252
Neff 10.6
Searched_HMMs 46136
Date Thu Mar 28 14:40:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008636.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008636hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1176 Acyl-CoA synthetase [L 100.0 1.1E-81 2.3E-86 628.7 50.3 518 4-553 6-535 (537)
2 KOG1177 Long chain fatty acid 100.0 6.2E-78 1.4E-82 558.8 42.9 514 10-551 46-588 (596)
3 COG0365 Acs Acyl-coenzyme A sy 100.0 4.2E-77 9.1E-82 592.1 45.0 492 19-550 14-522 (528)
4 COG0318 CaiC Acyl-CoA syntheta 100.0 5.5E-75 1.2E-79 602.9 53.1 510 8-550 5-527 (534)
5 PLN03102 acyl-activating enzym 100.0 3.1E-71 6.7E-76 583.2 54.7 543 1-552 1-556 (579)
6 PRK07788 acyl-CoA synthetase; 100.0 2.5E-71 5.3E-76 582.6 52.0 494 15-547 50-548 (549)
7 PTZ00237 acetyl-CoA synthetase 100.0 4E-71 8.7E-76 587.2 51.1 520 16-551 61-624 (647)
8 COG1021 EntE Peptide arylation 100.0 4.1E-72 9E-77 508.2 33.5 504 11-552 25-540 (542)
9 PLN02860 o-succinylbenzoate-Co 100.0 2E-70 4.4E-75 576.3 51.4 525 9-552 2-556 (563)
10 PLN02654 acetate-CoA ligase 100.0 3.2E-70 7E-75 582.2 53.3 515 17-551 91-641 (666)
11 TIGR02316 propion_prpE propion 100.0 5.6E-70 1.2E-74 579.2 53.3 516 17-552 55-606 (628)
12 PRK07529 AMP-binding domain pr 100.0 2.1E-69 4.7E-74 574.1 56.3 517 11-550 22-570 (632)
13 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 2.7E-69 5.8E-74 575.0 53.7 510 16-551 59-603 (625)
14 PRK13295 cyclohexanecarboxylat 100.0 1.8E-68 3.8E-73 560.4 55.0 503 9-550 19-544 (547)
15 PRK06839 acyl-CoA synthetase; 100.0 6.5E-69 1.4E-73 558.6 50.6 489 15-550 3-495 (496)
16 PRK13382 acyl-CoA synthetase; 100.0 1E-68 2.3E-73 560.1 51.5 492 11-546 40-536 (537)
17 PRK03640 O-succinylbenzoic aci 100.0 1.2E-68 2.6E-73 554.6 51.2 480 14-550 2-482 (483)
18 PLN02736 long-chain acyl-CoA s 100.0 9E-70 1.9E-74 579.5 43.9 520 10-554 40-645 (651)
19 PRK00174 acetyl-CoA synthetase 100.0 2.1E-68 4.6E-73 569.0 54.0 508 17-551 70-611 (637)
20 PRK08314 long-chain-fatty-acid 100.0 3.8E-68 8.2E-73 559.0 54.4 522 7-551 3-543 (546)
21 PRK06334 long chain fatty acid 100.0 1.6E-68 3.4E-73 557.8 49.6 502 11-551 16-536 (539)
22 PLN02246 4-coumarate--CoA liga 100.0 7.7E-68 1.7E-72 554.6 54.5 503 13-550 22-536 (537)
23 PRK06155 crotonobetaine/carnit 100.0 8.1E-68 1.8E-72 553.7 53.9 505 6-549 13-523 (542)
24 PLN02479 acetate-CoA ligase 100.0 1.1E-67 2.4E-72 556.0 53.6 549 1-554 7-562 (567)
25 PLN02574 4-coumarate--CoA liga 100.0 4.5E-68 9.8E-73 558.2 50.3 504 14-554 40-558 (560)
26 PRK05605 long-chain-fatty-acid 100.0 2.3E-67 5E-72 555.4 55.6 520 10-551 28-570 (573)
27 PRK06187 long-chain-fatty-acid 100.0 2.8E-67 6.1E-72 550.3 54.3 516 10-551 2-520 (521)
28 PRK05677 long-chain-fatty-acid 100.0 2.4E-67 5.1E-72 553.4 53.9 511 14-548 24-555 (562)
29 PRK07656 long-chain-fatty-acid 100.0 2.3E-67 4.9E-72 549.6 53.4 504 12-546 3-512 (513)
30 PRK08162 acyl-CoA synthetase; 100.0 5.8E-67 1.2E-71 549.6 56.2 533 4-553 8-542 (545)
31 PRK04319 acetyl-CoA synthetase 100.0 1.3E-67 2.8E-72 556.3 50.6 504 14-551 42-560 (570)
32 PRK08316 acyl-CoA synthetase; 100.0 3.5E-67 7.6E-72 549.5 53.3 508 13-553 10-522 (523)
33 PRK07638 acyl-CoA synthetase; 100.0 1.8E-67 3.8E-72 545.7 50.3 481 14-552 1-483 (487)
34 PRK07008 long-chain-fatty-acid 100.0 6E-67 1.3E-71 547.5 54.8 524 9-555 5-538 (539)
35 PRK10524 prpE propionyl-CoA sy 100.0 2.6E-67 5.7E-72 560.1 52.6 515 17-551 56-606 (629)
36 PLN02614 long-chain acyl-CoA s 100.0 1.8E-68 3.9E-73 567.6 43.3 519 14-555 45-654 (666)
37 PRK07470 acyl-CoA synthetase; 100.0 5.3E-67 1.1E-71 547.7 53.5 514 9-554 2-522 (528)
38 TIGR01217 ac_ac_CoA_syn acetoa 100.0 8.8E-67 1.9E-71 555.1 52.3 510 15-551 85-627 (652)
39 PRK05857 acyl-CoA synthetase; 100.0 2.8E-67 6E-72 549.8 47.4 515 7-551 7-532 (540)
40 PRK06145 acyl-CoA synthetase; 100.0 1.8E-66 3.9E-71 540.1 52.1 490 14-549 2-496 (497)
41 PRK07786 long-chain-fatty-acid 100.0 2.7E-66 5.8E-71 543.3 53.8 513 7-554 10-528 (542)
42 PRK06018 putative acyl-CoA syn 100.0 5.5E-66 1.2E-70 540.9 54.8 526 9-555 5-539 (542)
43 PRK03584 acetoacetyl-CoA synth 100.0 3E-66 6.4E-71 553.8 53.1 500 26-553 96-628 (655)
44 PLN02861 long-chain-fatty-acid 100.0 4.6E-67 9.9E-72 557.5 46.5 519 13-555 42-651 (660)
45 PRK05852 acyl-CoA synthetase; 100.0 2E-66 4.2E-71 543.6 50.5 509 12-550 14-532 (534)
46 PRK06060 acyl-CoA synthetase; 100.0 7.3E-67 1.6E-71 562.7 47.6 479 15-549 5-491 (705)
47 PLN02330 4-coumarate--CoA liga 100.0 3.5E-66 7.7E-71 542.9 51.6 504 12-552 26-543 (546)
48 PRK06188 acyl-CoA synthetase; 100.0 6.8E-66 1.5E-70 538.8 53.2 508 11-553 9-520 (524)
49 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 7.8E-66 1.7E-70 538.2 52.6 496 12-545 21-527 (527)
50 PRK07867 acyl-CoA synthetase; 100.0 8.1E-66 1.8E-70 536.6 52.2 490 12-552 3-509 (529)
51 PRK06087 short chain acyl-CoA 100.0 1.2E-65 2.5E-70 539.7 53.6 507 11-551 20-537 (547)
52 PRK05620 long-chain-fatty-acid 100.0 9.3E-66 2E-70 542.9 53.0 529 9-553 5-560 (576)
53 PRK06164 acyl-CoA synthetase; 100.0 9.7E-66 2.1E-70 539.7 52.8 518 10-553 6-535 (540)
54 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 1.3E-65 2.8E-70 537.9 53.1 494 13-545 21-537 (538)
55 PRK09274 peptide synthase; Pro 100.0 1.9E-66 4.1E-71 546.3 46.9 507 12-552 4-550 (552)
56 PRK08315 AMP-binding domain pr 100.0 1.1E-65 2.3E-70 541.9 52.8 518 7-554 9-555 (559)
57 PRK07514 malonyl-CoA synthase; 100.0 1.2E-65 2.7E-70 534.9 52.4 495 13-551 2-502 (504)
58 PLN03052 acetate--CoA ligase; 100.0 1.4E-65 3.1E-70 547.5 53.3 509 14-552 174-723 (728)
59 TIGR03098 ligase_PEP_1 acyl-Co 100.0 2E-65 4.2E-70 535.1 52.4 499 15-546 1-514 (515)
60 PRK12583 acyl-CoA synthetase; 100.0 5.2E-65 1.1E-69 536.9 55.3 514 10-554 14-556 (558)
61 PTZ00342 acyl-CoA synthetase; 100.0 1.2E-65 2.5E-70 544.0 48.3 520 12-553 59-737 (746)
62 PRK09088 acyl-CoA synthetase; 100.0 2.2E-65 4.8E-70 530.4 49.0 478 21-552 2-487 (488)
63 PRK08008 caiC putative crotono 100.0 5.9E-65 1.3E-69 531.1 52.5 499 13-545 6-517 (517)
64 PRK13388 acyl-CoA synthetase; 100.0 5.1E-65 1.1E-69 532.3 51.6 488 14-553 3-509 (540)
65 PRK07769 long-chain-fatty-acid 100.0 1.4E-65 3E-70 546.7 47.0 504 12-551 19-615 (631)
66 PRK10946 entE enterobactin syn 100.0 1.3E-64 2.8E-69 529.6 52.6 499 11-552 22-534 (536)
67 PRK12492 long-chain-fatty-acid 100.0 1.7E-64 3.8E-69 531.6 53.2 510 14-547 24-561 (562)
68 PRK08043 bifunctional acyl-[ac 100.0 2.8E-65 6E-70 550.5 47.6 500 12-554 202-717 (718)
69 PRK06178 acyl-CoA synthetase; 100.0 4.6E-64 1E-68 529.6 55.2 521 13-551 32-566 (567)
70 PRK13383 acyl-CoA synthetase; 100.0 1E-64 2.3E-69 528.3 49.7 476 12-545 33-515 (516)
71 PRK06710 long-chain-fatty-acid 100.0 1.7E-64 3.8E-69 532.4 51.2 518 14-554 24-559 (563)
72 TIGR03443 alpha_am_amid L-amin 100.0 5.5E-65 1.2E-69 587.3 50.9 519 13-546 235-824 (1389)
73 PLN02387 long-chain-fatty-acid 100.0 4E-65 8.7E-70 544.6 45.6 522 13-555 57-694 (696)
74 PRK07059 Long-chain-fatty-acid 100.0 6E-64 1.3E-68 527.6 53.4 512 11-547 20-555 (557)
75 PRK08279 long-chain-acyl-CoA s 100.0 3.4E-64 7.5E-69 533.6 51.6 504 9-551 32-565 (600)
76 PRK12467 peptide synthase; Pro 100.0 7.5E-66 1.6E-70 631.0 44.3 490 12-550 3093-3594(3956)
77 TIGR03205 pimA dicarboxylate-- 100.0 2E-63 4.3E-68 521.8 53.8 511 12-545 19-541 (541)
78 PRK05851 long-chain-fatty-acid 100.0 7.1E-65 1.5E-69 529.8 41.5 486 14-550 1-522 (525)
79 PRK08633 2-acyl-glycerophospho 100.0 2.9E-64 6.3E-69 574.2 49.9 516 11-552 612-1145(1146)
80 PRK10252 entF enterobactin syn 100.0 2.5E-64 5.4E-69 580.2 48.2 490 10-547 454-964 (1296)
81 PRK08751 putative long-chain f 100.0 2.5E-63 5.3E-68 523.6 50.6 510 14-548 25-558 (560)
82 TIGR01734 D-ala-DACP-lig D-ala 100.0 8.9E-64 1.9E-68 520.7 46.3 489 15-549 1-501 (502)
83 PLN02430 long-chain-fatty-acid 100.0 4.4E-64 9.5E-69 533.4 44.8 520 12-554 40-650 (660)
84 PRK12476 putative fatty-acid-- 100.0 6.3E-64 1.4E-68 531.6 45.5 504 12-553 32-609 (612)
85 TIGR02262 benz_CoA_lig benzoat 100.0 4.4E-63 9.5E-68 515.6 50.6 495 17-547 7-508 (508)
86 PRK08180 feruloyl-CoA synthase 100.0 3.9E-64 8.4E-69 533.0 43.1 509 5-556 30-602 (614)
87 KOG1175 Acyl-CoA synthetase [L 100.0 9E-64 1.9E-68 496.9 42.2 501 20-551 70-603 (626)
88 PRK12467 peptide synthase; Pro 100.0 6.1E-64 1.3E-68 614.3 49.7 504 4-550 502-1018(3956)
89 PRK12316 peptide synthase; Pro 100.0 4.7E-64 1E-68 624.5 48.8 485 13-550 510-1006(5163)
90 PRK12316 peptide synthase; Pro 100.0 6.4E-64 1.4E-68 623.3 46.4 488 13-548 2002-2502(5163)
91 PRK07787 acyl-CoA synthetase; 100.0 8E-63 1.7E-67 508.2 46.6 455 25-547 11-470 (471)
92 PRK13390 acyl-CoA synthetase; 100.0 9.3E-63 2E-67 512.3 47.4 481 22-545 5-501 (501)
93 PRK09029 O-succinylbenzoic aci 100.0 1.2E-62 2.5E-67 505.4 46.3 454 15-554 3-457 (458)
94 COG1022 FAA1 Long-chain acyl-C 100.0 1.5E-63 3.2E-68 501.9 38.6 505 13-553 15-604 (613)
95 PRK08974 long-chain-fatty-acid 100.0 1.2E-61 2.6E-66 510.5 54.4 513 14-550 23-555 (560)
96 PRK07445 O-succinylbenzoic aci 100.0 4.5E-63 9.8E-68 504.0 42.0 430 39-552 19-449 (452)
97 PRK07798 acyl-CoA synthetase; 100.0 1.1E-61 2.4E-66 509.3 53.7 502 13-550 2-532 (533)
98 PRK04813 D-alanine--poly(phosp 100.0 2.8E-62 6E-67 510.0 48.5 491 14-550 2-503 (503)
99 PTZ00216 acyl-CoA synthetase; 100.0 1E-62 2.2E-67 527.6 44.8 514 12-556 67-697 (700)
100 PRK12406 long-chain-fatty-acid 100.0 1.7E-61 3.7E-66 503.8 52.5 492 31-551 3-504 (509)
101 PRK05691 peptide synthase; Val 100.0 9.8E-63 2.1E-67 608.9 48.7 495 12-547 3718-4225(4334)
102 PRK05691 peptide synthase; Val 100.0 8E-63 1.7E-67 609.7 47.4 493 3-547 1120-1625(4334)
103 KOG1256 Long-chain acyl-CoA sy 100.0 1.4E-62 3.1E-67 486.3 37.4 524 10-556 71-686 (691)
104 PRK13391 acyl-CoA synthetase; 100.0 5.8E-61 1.3E-65 499.8 51.4 493 20-550 3-509 (511)
105 PRK08276 long-chain-fatty-acid 100.0 6.6E-61 1.4E-65 498.7 48.4 483 31-551 3-497 (502)
106 PRK07868 acyl-CoA synthetase; 100.0 7.8E-61 1.7E-65 527.4 50.7 490 11-548 444-956 (994)
107 PRK12582 acyl-CoA synthetase; 100.0 1.5E-61 3.1E-66 514.3 40.8 507 7-557 42-614 (624)
108 PRK06814 acylglycerophosphoeth 100.0 1.5E-60 3.1E-65 541.4 50.8 499 11-553 628-1135(1140)
109 PLN03051 acyl-activating enzym 100.0 1.3E-60 2.9E-65 494.1 43.6 456 71-556 1-497 (499)
110 PRK09192 acyl-CoA synthetase; 100.0 2E-60 4.4E-65 502.3 44.9 508 6-556 14-572 (579)
111 TIGR01923 menE O-succinylbenzo 100.0 1.7E-60 3.6E-65 487.2 42.4 436 41-544 1-436 (436)
112 PRK05850 acyl-CoA synthetase; 100.0 2.3E-60 4.9E-65 502.7 44.8 508 14-557 1-575 (578)
113 KOG1180 Acyl-CoA synthetase [L 100.0 5E-60 1.1E-64 446.9 34.1 527 8-553 35-672 (678)
114 PRK08308 acyl-CoA synthetase; 100.0 4.4E-58 9.5E-63 464.7 44.0 407 32-545 1-408 (414)
115 PRK07768 long-chain-fatty-acid 100.0 2.1E-57 4.6E-62 476.9 43.8 493 15-549 3-544 (545)
116 KOG1179 Very long-chain acyl-C 100.0 2.1E-55 4.6E-60 417.5 40.1 507 12-547 75-610 (649)
117 PF00501 AMP-binding: AMP-bind 100.0 2.5E-56 5.4E-61 453.6 32.0 396 20-450 1-417 (417)
118 TIGR01733 AA-adenyl-dom amino 100.0 1.3E-51 2.8E-56 418.0 35.9 393 41-474 1-408 (408)
119 PRK07824 O-succinylbenzoic aci 100.0 1.8E-47 3.9E-52 379.6 35.7 320 186-550 32-357 (358)
120 PTZ00297 pantothenate kinase; 100.0 1.7E-45 3.6E-50 405.0 43.1 485 12-555 425-1000(1452)
121 COG1020 EntF Non-ribosomal pep 100.0 1.4E-38 3E-43 340.7 38.0 405 14-467 227-642 (642)
122 TIGR02372 4_coum_CoA_lig 4-cou 100.0 2.6E-38 5.7E-43 311.4 29.2 301 166-540 82-386 (386)
123 TIGR02155 PA_CoA_ligase phenyl 100.0 3.8E-36 8.1E-41 304.3 28.5 322 187-542 73-418 (422)
124 KOG1178 Non-ribosomal peptide 100.0 1.1E-32 2.4E-37 288.4 26.9 493 14-550 36-579 (1032)
125 KOG3628 Predicted AMP-binding 100.0 3.5E-29 7.6E-34 253.9 36.4 509 14-552 770-1353(1363)
126 TIGR03335 F390_ftsA coenzyme F 100.0 5.2E-29 1.1E-33 252.0 27.9 321 186-541 83-440 (445)
127 COG1541 PaaK Coenzyme F390 syn 100.0 2.1E-27 4.5E-32 227.0 27.8 321 186-541 87-430 (438)
128 TIGR03089 conserved hypothetic 99.9 1.4E-25 3.1E-30 204.5 22.8 218 20-279 2-227 (227)
129 PRK09188 serine/threonine prot 99.9 8.6E-22 1.9E-26 189.7 14.6 121 418-552 206-330 (365)
130 KOG3628 Predicted AMP-binding 99.9 1.3E-19 2.8E-24 185.0 23.6 498 15-556 95-710 (1363)
131 TIGR02304 aden_form_hyp probab 99.8 8E-18 1.7E-22 166.2 24.7 244 190-478 100-367 (430)
132 PF13193 AMP-binding_C: AMP-bi 99.3 9.1E-12 2E-16 91.5 6.0 70 458-538 1-73 (73)
133 PF04443 LuxE: Acyl-protein sy 98.9 1.7E-07 3.7E-12 91.0 18.2 223 187-445 87-350 (365)
134 PF03321 GH3: GH3 auxin-respon 98.4 5.6E-06 1.2E-10 85.4 16.1 177 300-516 266-467 (528)
135 PLN02249 indole-3-acetic acid- 97.8 0.002 4.3E-08 67.0 18.6 62 386-465 391-456 (597)
136 PLN02247 indole-3-acetic acid- 97.7 0.0067 1.5E-07 62.7 21.4 63 386-466 398-464 (606)
137 PLN02620 indole-3-acetic acid- 97.4 0.012 2.5E-07 60.8 17.6 63 386-466 404-470 (612)
138 PF14535 AMP-binding_C_2: AMP- 97.4 0.00042 9.1E-09 53.6 5.6 86 451-541 1-91 (96)
139 COG1541 PaaK Coenzyme F390 syn 95.3 0.14 3.1E-06 50.6 10.3 93 39-132 109-203 (438)
140 TIGR02155 PA_CoA_ligase phenyl 88.7 3.1 6.6E-05 42.3 10.0 89 39-128 94-184 (422)
141 TIGR03335 F390_ftsA coenzyme F 87.8 3.9 8.6E-05 41.8 10.1 80 39-121 105-186 (445)
142 TIGR03089 conserved hypothetic 81.8 9.7 0.00021 34.8 8.8 76 28-112 149-226 (227)
143 PRK07656 long-chain-fatty-acid 81.1 14 0.0003 38.5 10.9 86 38-127 184-271 (513)
144 PRK06334 long chain fatty acid 75.4 46 0.001 35.0 12.9 99 27-128 181-290 (539)
145 PRK06187 long-chain-fatty-acid 74.1 25 0.00055 36.5 10.5 86 39-128 186-272 (521)
146 PF00501 AMP-binding: AMP-bind 68.6 40 0.00087 33.9 10.2 88 187-283 8-99 (417)
147 PRK08315 AMP-binding domain pr 68.6 42 0.0009 35.4 10.7 84 38-124 217-302 (559)
148 COG0399 WecE Predicted pyridox 67.5 25 0.00055 34.7 7.9 78 50-131 60-147 (374)
149 PLN02736 long-chain acyl-CoA s 66.6 1E+02 0.0023 33.3 13.4 100 207-309 77-180 (651)
150 PRK12583 acyl-CoA synthetase; 65.2 53 0.0011 34.6 10.7 82 38-122 219-302 (558)
151 PRK02261 methylaspartate mutas 64.9 79 0.0017 26.1 10.2 100 233-335 7-120 (137)
152 PLN03051 acyl-activating enzym 63.3 39 0.00085 35.1 9.1 85 38-125 137-222 (499)
153 PRK04319 acetyl-CoA synthetase 61.1 56 0.0012 34.6 9.9 96 28-126 204-310 (570)
154 TIGR01733 AA-adenyl-dom amino 61.0 73 0.0016 31.8 10.4 98 28-128 119-228 (408)
155 KOG1177 Long chain fatty acid 61.0 70 0.0015 32.4 9.4 105 205-310 74-198 (596)
156 TIGR03098 ligase_PEP_1 acyl-Co 60.6 67 0.0014 33.4 10.4 86 38-127 179-265 (515)
157 PRK06381 threonine synthase; V 58.7 1.1E+02 0.0024 29.5 10.7 114 3-122 4-120 (319)
158 PLN02565 cysteine synthase 57.3 1.6E+02 0.0035 28.5 11.5 89 30-120 31-122 (322)
159 TIGR02370 pyl_corrinoid methyl 56.9 1.2E+02 0.0026 26.9 9.7 88 232-319 86-183 (197)
160 TIGR01923 menE O-succinylbenzo 56.2 40 0.00086 34.1 7.6 82 38-125 129-211 (436)
161 PF01041 DegT_DnrJ_EryC1: DegT 54.7 36 0.00079 33.6 6.8 64 51-118 52-120 (363)
162 PRK10696 tRNA 2-thiocytidine b 54.4 1.4E+02 0.003 27.9 10.1 79 41-119 4-95 (258)
163 cd01445 TST_Repeats Thiosulfat 54.2 35 0.00075 28.2 5.5 43 50-92 81-126 (138)
164 COG4009 Uncharacterized protei 53.7 76 0.0017 23.0 6.0 66 38-114 8-76 (88)
165 PLN03052 acetate--CoA ligase; 53.5 1.3E+02 0.0028 33.2 11.3 98 188-287 189-290 (728)
166 TIGR03590 PseG pseudaminic aci 52.7 1.5E+02 0.0032 28.0 10.3 90 48-148 19-113 (279)
167 PLN02860 o-succinylbenzoate-Co 52.5 1E+02 0.0022 32.6 10.1 97 27-127 170-276 (563)
168 PRK09274 peptide synthase; Pro 52.4 1.4E+02 0.003 31.5 11.1 97 188-285 20-121 (552)
169 PRK08316 acyl-CoA synthetase; 52.2 1.1E+02 0.0023 31.9 10.3 84 38-125 189-274 (523)
170 TIGR02379 ECA_wecE TDP-4-keto- 51.9 54 0.0012 32.6 7.4 59 56-118 63-126 (376)
171 PRK05620 long-chain-fatty-acid 50.3 2.4E+02 0.0052 29.9 12.6 88 38-126 199-287 (576)
172 PRK11706 TDP-4-oxo-6-deoxy-D-g 49.1 68 0.0015 31.9 7.7 55 59-117 66-125 (375)
173 TIGR02275 DHB_AMP_lig 2,3-dihy 48.9 2E+02 0.0043 30.0 11.6 97 27-127 181-289 (527)
174 KOG0023 Alcohol dehydrogenase, 48.7 1.1E+02 0.0025 29.3 8.2 75 54-131 172-246 (360)
175 TIGR02262 benz_CoA_lig benzoat 48.1 2E+02 0.0043 29.8 11.4 95 27-123 159-264 (508)
176 PLN02246 4-coumarate--CoA liga 48.0 1.4E+02 0.0031 31.2 10.4 83 208-291 50-136 (537)
177 PRK07638 acyl-CoA synthetase; 47.7 1.1E+02 0.0024 31.5 9.4 86 38-127 161-247 (487)
178 PRK06164 acyl-CoA synthetase; 47.6 1.1E+02 0.0025 31.9 9.6 96 28-127 180-285 (540)
179 PRK08308 acyl-CoA synthetase; 47.5 1.6E+02 0.0035 29.5 10.4 95 27-125 99-204 (414)
180 TIGR01139 cysK cysteine syntha 47.4 1.7E+02 0.0038 27.9 9.9 92 29-121 21-113 (298)
181 PRK06188 acyl-CoA synthetase; 47.0 1.6E+02 0.0035 30.7 10.6 86 38-127 186-271 (524)
182 PRK07788 acyl-CoA synthetase; 46.9 1.1E+02 0.0024 32.1 9.4 84 208-292 74-161 (549)
183 PRK13295 cyclohexanecarboxylat 46.9 2.7E+02 0.0059 29.2 12.3 96 27-126 195-301 (547)
184 PLN02556 cysteine synthase/L-3 46.8 1.3E+02 0.0029 29.8 9.1 63 57-119 102-165 (368)
185 PRK03640 O-succinylbenzoic aci 46.7 1.4E+02 0.003 30.7 9.9 84 39-126 160-244 (483)
186 PLN02387 long-chain-fatty-acid 46.3 2E+02 0.0044 31.5 11.4 101 207-310 105-209 (696)
187 PRK08043 bifunctional acyl-[ac 46.1 1.3E+02 0.0028 33.0 10.0 91 27-120 363-464 (718)
188 PTZ00237 acetyl-CoA synthetase 45.7 1.4E+02 0.003 32.3 10.0 94 188-285 75-172 (647)
189 COG4821 Uncharacterized protei 45.1 62 0.0013 28.4 5.5 55 44-119 84-139 (243)
190 PLN03102 acyl-activating enzym 44.3 1E+02 0.0022 32.8 8.7 83 208-291 39-125 (579)
191 COG0031 CysK Cysteine synthase 44.3 1.8E+02 0.004 27.7 9.1 65 54-119 51-116 (300)
192 TIGR02188 Ac_CoA_lig_AcsA acet 44.2 1.9E+02 0.0041 31.1 10.8 96 187-286 70-169 (625)
193 PRK07529 AMP-binding domain pr 44.1 1.7E+02 0.0036 31.6 10.3 94 187-284 38-136 (632)
194 PRK06839 acyl-CoA synthetase; 44.1 2.3E+02 0.0049 29.2 11.1 84 207-291 26-114 (496)
195 PRK00174 acetyl-CoA synthetase 44.0 1.9E+02 0.004 31.2 10.7 96 187-286 80-179 (637)
196 PLN03013 cysteine synthase 43.6 1.6E+02 0.0035 29.8 9.2 80 39-120 150-230 (429)
197 PRK06155 crotonobetaine/carnit 43.5 1.4E+02 0.003 31.4 9.5 85 208-293 46-134 (542)
198 PRK03584 acetoacetyl-CoA synth 43.2 1.9E+02 0.0042 31.3 10.7 94 188-286 98-195 (655)
199 KOG1176 Acyl-CoA synthetase [L 43.2 94 0.002 32.6 7.7 88 206-294 43-136 (537)
200 cd01449 TST_Repeat_2 Thiosulfa 43.0 54 0.0012 25.9 4.9 41 50-90 64-104 (118)
201 cd00640 Trp-synth-beta_II Tryp 42.8 2.3E+02 0.0049 26.0 9.7 92 29-121 15-106 (244)
202 TIGR01136 cysKM cysteine synth 42.8 1.4E+02 0.003 28.6 8.4 89 29-120 22-113 (299)
203 PRK07470 acyl-CoA synthetase; 42.7 2.8E+02 0.0061 28.9 11.6 100 27-127 161-270 (528)
204 cd06448 L-Ser-dehyd Serine deh 42.4 2.7E+02 0.0059 26.9 10.4 89 29-120 16-106 (316)
205 PRK08633 2-acyl-glycerophospho 42.1 2.5E+02 0.0053 32.9 12.0 97 27-126 780-887 (1146)
206 TIGR01217 ac_ac_CoA_syn acetoa 41.4 2.4E+02 0.0053 30.5 11.0 93 189-286 99-195 (652)
207 PLN02654 acetate-CoA ligase 41.2 1.7E+02 0.0037 31.8 9.9 95 188-286 103-201 (666)
208 cd06404 PB1_aPKC PB1 domain is 41.0 74 0.0016 23.5 4.6 58 29-86 9-72 (83)
209 TIGR02316 propion_prpE propion 40.9 1.8E+02 0.0039 31.3 10.0 94 188-285 66-163 (628)
210 PTZ00342 acyl-CoA synthetase; 40.8 2.6E+02 0.0056 30.9 11.1 116 188-310 75-208 (746)
211 PLN02574 4-coumarate--CoA liga 40.2 2.8E+02 0.006 29.3 11.1 98 187-292 52-154 (560)
212 PF09580 Spore_YhcN_YlaJ: Spor 40.0 70 0.0015 27.7 5.5 26 455-480 76-101 (177)
213 PRK11761 cysM cysteine synthas 39.9 1.7E+02 0.0037 27.9 8.5 87 30-119 28-117 (296)
214 PRK05850 acyl-CoA synthetase; 39.4 3.1E+02 0.0066 29.0 11.4 83 207-291 34-123 (578)
215 TIGR01138 cysM cysteine syntha 39.3 2.4E+02 0.0052 26.8 9.4 90 29-119 23-113 (290)
216 PRK07476 eutB threonine dehydr 38.8 2.2E+02 0.0049 27.5 9.3 90 30-122 35-124 (322)
217 PLN00011 cysteine synthase 38.8 2.4E+02 0.0051 27.4 9.4 90 30-120 33-124 (323)
218 cd02070 corrinoid_protein_B12- 38.6 2.8E+02 0.0061 24.6 11.3 110 212-321 64-183 (201)
219 PLN02614 long-chain acyl-CoA s 38.6 3.7E+02 0.0081 29.2 11.9 85 207-292 78-166 (666)
220 PRK08314 long-chain-fatty-acid 38.5 1.5E+02 0.0033 31.1 8.8 84 208-292 35-123 (546)
221 COG1022 FAA1 Long-chain acyl-C 38.0 2.2E+02 0.0048 30.4 9.5 101 25-129 187-297 (613)
222 cd01519 RHOD_HSP67B2 Member of 38.0 70 0.0015 24.6 4.8 52 39-90 37-92 (106)
223 PRK10946 entE enterobactin syn 37.9 3.2E+02 0.007 28.5 11.2 98 27-128 180-289 (536)
224 PRK05857 acyl-CoA synthetase; 37.5 2E+02 0.0044 30.1 9.6 80 207-287 40-123 (540)
225 PRK05605 long-chain-fatty-acid 37.4 1.7E+02 0.0036 31.0 9.0 83 208-291 57-143 (573)
226 PRK11658 UDP-4-amino-4-deoxy-L 37.4 1.3E+02 0.0029 29.9 7.7 61 52-116 61-126 (379)
227 PRK08276 long-chain-fatty-acid 37.2 2E+02 0.0044 29.7 9.5 83 208-291 11-97 (502)
228 PLN02550 threonine dehydratase 37.2 4.8E+02 0.01 27.8 11.7 92 27-123 122-215 (591)
229 PRK08279 long-chain-acyl-CoA s 37.0 2.2E+02 0.0047 30.4 9.8 81 38-122 217-299 (600)
230 PF09153 DUF1938: Domain of un 37.0 82 0.0018 23.1 4.2 32 31-62 16-54 (86)
231 PRK06702 O-acetylhomoserine am 36.9 1.6E+02 0.0034 30.0 8.0 51 69-119 80-133 (432)
232 PRK13388 acyl-CoA synthetase; 36.8 3E+02 0.0064 28.9 10.7 83 208-291 26-113 (540)
233 COG5012 Predicted cobalamin bi 36.7 2.4E+02 0.0053 25.4 8.1 82 240-321 116-205 (227)
234 PRK13383 acyl-CoA synthetase; 36.6 2E+02 0.0043 29.9 9.3 84 208-292 60-147 (516)
235 TIGR01501 MthylAspMutase methy 36.5 2.4E+02 0.0053 23.2 8.8 94 240-336 13-119 (134)
236 PRK07787 acyl-CoA synthetase; 36.4 3.3E+02 0.0071 27.8 10.8 95 27-126 126-231 (471)
237 COG0318 CaiC Acyl-CoA syntheta 36.3 3.9E+02 0.0084 28.1 11.4 100 27-127 169-280 (534)
238 PRK10717 cysteine synthase A; 35.9 2.6E+02 0.0056 27.2 9.3 88 30-120 29-119 (330)
239 TIGR03588 PseC UDP-4-keto-6-de 35.7 1.7E+02 0.0037 29.0 8.2 65 50-117 55-127 (380)
240 TIGR03208 cyc_hxne_CoA_lg cycl 35.5 4.9E+02 0.011 27.2 12.1 95 27-125 193-298 (538)
241 PRK07514 malonyl-CoA synthase; 35.4 2.1E+02 0.0046 29.5 9.3 84 207-291 27-114 (504)
242 PLN02330 4-coumarate--CoA liga 35.2 2.4E+02 0.0053 29.5 9.7 96 188-291 42-141 (546)
243 TIGR02372 4_coum_CoA_lig 4-cou 35.2 4.7E+02 0.01 26.1 12.5 106 14-125 80-198 (386)
244 PRK10252 entF enterobactin syn 35.2 2.3E+02 0.0049 33.8 10.4 98 27-127 596-705 (1296)
245 cd01561 CBS_like CBS_like: Thi 35.1 3.3E+02 0.0072 25.8 9.7 90 29-121 17-109 (291)
246 PRK05677 long-chain-fatty-acid 35.1 2.6E+02 0.0057 29.5 10.0 81 208-289 49-134 (562)
247 PRK06382 threonine dehydratase 34.8 2.7E+02 0.0057 28.1 9.4 55 69-123 77-131 (406)
248 PRK05852 acyl-CoA synthetase; 34.5 4.4E+02 0.0095 27.5 11.5 87 38-127 194-283 (534)
249 PRK11493 sseA 3-mercaptopyruva 34.5 70 0.0015 30.3 4.9 53 39-91 201-258 (281)
250 PF09269 DUF1967: Domain of un 34.4 35 0.00075 24.3 2.1 21 49-69 42-62 (69)
251 PRK07008 long-chain-fatty-acid 34.1 1.8E+02 0.0038 30.6 8.5 88 38-127 194-283 (539)
252 TIGR03595 Obg_CgtA_exten Obg f 34.1 49 0.0011 23.5 2.9 19 52-70 45-63 (69)
253 PRK08008 caiC putative crotono 33.6 3.2E+02 0.0069 28.3 10.3 83 208-291 37-123 (517)
254 PRK15407 lipopolysaccharide bi 33.4 1.5E+02 0.0033 30.2 7.4 55 60-118 107-166 (438)
255 PRK07798 acyl-CoA synthetase; 33.1 3.7E+02 0.008 27.9 10.7 84 208-292 28-115 (533)
256 PF00818 Ice_nucleation: Ice n 33.0 21 0.00046 17.0 0.6 9 331-339 1-9 (16)
257 PTZ00216 acyl-CoA synthetase; 33.0 3.5E+02 0.0075 29.6 10.7 88 206-294 119-210 (700)
258 PLN02723 3-mercaptopyruvate su 32.9 79 0.0017 30.6 5.1 54 39-92 238-297 (320)
259 cd00754 MoaD Ubiquitin domain 32.8 1.1E+02 0.0024 22.1 4.8 46 13-73 25-77 (80)
260 PRK10877 protein disulfide iso 32.8 3.9E+02 0.0084 24.4 9.6 74 426-514 55-131 (232)
261 cd07050 BMC_EutL_repeat2 ethan 32.6 94 0.002 22.7 3.9 42 53-94 3-45 (87)
262 PRK10524 prpE propionyl-CoA sy 32.6 3.2E+02 0.0069 29.4 10.2 95 187-285 66-164 (629)
263 TIGR01734 D-ala-DACP-lig D-ala 32.3 4E+02 0.0086 27.4 10.7 85 38-125 159-246 (502)
264 PLN02861 long-chain-fatty-acid 32.1 2.9E+02 0.0063 30.0 9.8 85 207-292 76-164 (660)
265 COG2236 Predicted phosphoribos 32.1 73 0.0016 28.1 4.2 33 38-70 5-37 (192)
266 PRK13391 acyl-CoA synthetase; 31.6 4.2E+02 0.0091 27.4 10.7 97 187-291 10-110 (511)
267 PRK10595 SOS cell division inh 31.6 2E+02 0.0042 24.7 6.5 35 54-88 71-105 (164)
268 PRK09088 acyl-CoA synthetase; 31.6 3.7E+02 0.0081 27.5 10.3 78 208-286 22-103 (488)
269 TIGR02304 aden_form_hyp probab 31.4 4E+02 0.0086 27.1 9.9 70 59-131 138-207 (430)
270 PRK08751 putative long-chain f 30.6 2.4E+02 0.0052 29.7 8.8 83 208-291 50-137 (560)
271 TIGR03443 alpha_am_amid L-amin 30.1 2.9E+02 0.0063 33.2 10.2 98 187-285 249-350 (1389)
272 PLN02356 phosphateglycerate ki 29.8 3.5E+02 0.0075 27.5 9.0 71 48-119 87-158 (423)
273 PF00403 HMA: Heavy-metal-asso 29.7 1.8E+02 0.0039 19.6 5.2 46 456-514 13-58 (62)
274 PRK08162 acyl-CoA synthetase; 29.3 2.4E+02 0.0052 29.5 8.5 83 208-291 43-129 (545)
275 PRK13382 acyl-CoA synthetase; 28.9 3.4E+02 0.0075 28.4 9.6 82 208-290 68-153 (537)
276 PRK12476 putative fatty-acid-- 28.9 6.5E+02 0.014 26.9 11.8 101 188-291 48-156 (612)
277 TIGR01137 cysta_beta cystathio 28.4 3.4E+02 0.0073 27.8 9.2 89 30-119 27-116 (454)
278 PF07994 NAD_binding_5: Myo-in 28.3 4.8E+02 0.011 24.9 9.3 73 40-114 126-228 (295)
279 PRK06145 acyl-CoA synthetase; 28.3 6.5E+02 0.014 25.8 11.5 96 27-126 147-253 (497)
280 PF03744 BioW: 6-carboxyhexano 28.1 85 0.0018 28.6 4.0 8 392-399 174-181 (239)
281 PF06277 EutA: Ethanolamine ut 27.7 4.2E+02 0.009 27.2 9.0 68 14-82 353-426 (473)
282 PF01276 OKR_DC_1: Orn/Lys/Arg 27.5 1.1E+02 0.0025 30.7 5.2 48 61-111 103-164 (417)
283 PRK06087 short chain acyl-CoA 27.4 5.2E+02 0.011 27.0 10.6 76 39-118 206-283 (547)
284 PRK06178 acyl-CoA synthetase; 27.3 3.2E+02 0.007 28.8 9.1 84 208-292 58-145 (567)
285 PRK06814 acylglycerophosphoeth 27.2 4.6E+02 0.01 30.7 11.0 95 27-124 791-896 (1140)
286 PRK07059 Long-chain-fatty-acid 27.1 3.2E+02 0.0069 28.7 9.0 83 207-290 47-133 (557)
287 PRK12406 long-chain-fatty-acid 26.7 2.9E+02 0.0063 28.6 8.5 83 208-291 11-97 (509)
288 TIGR02898 spore_YhcN_YlaJ spor 26.4 1.7E+02 0.0037 24.9 5.2 25 456-480 56-80 (158)
289 PLN02479 acetate-CoA ligase 26.2 3.5E+02 0.0076 28.6 9.1 81 208-289 45-129 (567)
290 PRK09162 hypoxanthine-guanine 26.1 1.8E+02 0.0039 25.4 5.7 47 37-84 14-60 (181)
291 TIGR01127 ilvA_1Cterm threonin 26.1 4.2E+02 0.0091 26.3 9.1 91 28-123 14-106 (380)
292 cd01448 TST_Repeat_1 Thiosulfa 25.7 1.7E+02 0.0037 23.2 5.2 41 50-90 65-106 (122)
293 COG1167 ARO8 Transcriptional r 25.7 1.8E+02 0.004 29.8 6.5 57 62-119 177-234 (459)
294 PRK05939 hypothetical protein; 25.4 2.8E+02 0.0061 27.8 7.7 37 83-119 81-118 (397)
295 TIGR00640 acid_CoA_mut_C methy 25.0 3.8E+02 0.0083 21.9 8.5 85 240-326 14-106 (132)
296 PRK12483 threonine dehydratase 24.6 5.1E+02 0.011 27.2 9.4 61 68-128 88-148 (521)
297 cd02069 methionine_synthase_B1 24.6 3.9E+02 0.0085 24.0 7.7 93 228-320 87-186 (213)
298 PRK10719 eutA reactivating fac 24.1 5.1E+02 0.011 26.6 8.9 79 15-94 355-441 (475)
299 PRK08813 threonine dehydratase 24.0 6.6E+02 0.014 24.7 9.6 57 68-124 84-140 (349)
300 COG1064 AdhP Zn-dependent alco 23.8 1.7E+02 0.0037 28.5 5.4 61 55-119 158-218 (339)
301 PF05452 Clavanin: Clavanin; 23.8 39 0.00085 23.3 0.8 7 421-427 73-79 (80)
302 TIGR00936 ahcY adenosylhomocys 23.7 7.7E+02 0.017 24.9 10.7 61 62-122 30-92 (406)
303 PLN02409 serine--glyoxylate am 23.7 5.3E+02 0.011 25.8 9.4 74 44-118 39-114 (401)
304 PLN02430 long-chain-fatty-acid 23.6 9.6E+02 0.021 26.0 13.8 100 208-309 76-179 (660)
305 PRK07867 acyl-CoA synthetase; 23.4 4.4E+02 0.0096 27.5 9.1 83 208-291 28-115 (529)
306 PRK12582 acyl-CoA synthetase; 23.4 2.9E+02 0.0063 29.7 7.9 78 207-285 79-165 (624)
307 PRK07769 long-chain-fatty-acid 23.2 9.1E+02 0.02 25.8 11.7 83 207-290 54-142 (631)
308 PRK08526 threonine dehydratase 23.2 5.6E+02 0.012 25.8 9.2 59 69-127 72-130 (403)
309 cd06451 AGAT_like Alanine-glyo 23.1 5.1E+02 0.011 25.2 9.1 77 41-118 26-104 (356)
310 PRK08574 cystathionine gamma-s 23.0 3.5E+02 0.0075 27.0 7.8 11 41-51 54-64 (385)
311 KOG0633 Histidinol phosphate a 22.8 75 0.0016 29.3 2.6 70 50-119 96-168 (375)
312 cd01563 Thr-synth_1 Threonine 22.3 3.4E+02 0.0073 26.3 7.4 89 29-123 38-128 (324)
313 PRK09192 acyl-CoA synthetase; 22.3 5.3E+02 0.012 27.3 9.6 84 207-291 48-142 (579)
314 PRK13390 acyl-CoA synthetase; 22.3 8E+02 0.017 25.2 10.8 78 208-286 24-105 (501)
315 cd01019 ZnuA Zinc binding prot 22.2 6.4E+02 0.014 23.9 9.1 90 42-131 156-248 (286)
316 KOG1179 Very long-chain acyl-C 22.2 3.6E+02 0.0079 28.3 7.4 81 39-124 261-344 (649)
317 PRK07768 long-chain-fatty-acid 22.1 5.9E+02 0.013 26.6 9.9 90 27-119 150-254 (545)
318 PRK10287 thiosulfate:cyanide s 22.0 3.1E+02 0.0066 21.3 5.7 50 38-94 41-90 (104)
319 PF00036 EF-hand_1: EF hand; 21.9 87 0.0019 17.7 1.9 22 530-551 8-29 (29)
320 PRK04813 D-alanine--poly(phosp 21.8 8.7E+02 0.019 24.8 11.6 85 38-125 161-248 (503)
321 PRK13578 ornithine decarboxyla 21.7 2.6E+02 0.0057 30.5 6.8 48 61-110 211-272 (720)
322 TIGR02080 O_succ_thio_ly O-suc 21.7 4.2E+02 0.009 26.4 8.1 51 69-119 70-123 (382)
323 cd06447 D-Ser-dehyd D-Serine d 21.7 4E+02 0.0087 26.8 7.8 59 67-125 136-194 (404)
324 cd01529 4RHOD_Repeats Member o 21.6 3.5E+02 0.0076 20.2 6.0 48 39-89 34-81 (96)
325 PRK02228 V-type ATP synthase s 21.4 3.8E+02 0.0083 20.6 6.0 76 66-146 2-79 (100)
326 PRK13237 tyrosine phenol-lyase 21.3 4.9E+02 0.011 26.7 8.2 68 39-111 77-174 (460)
327 PRK07786 long-chain-fatty-acid 21.2 4.8E+02 0.01 27.3 8.9 83 208-291 42-128 (542)
328 cd01562 Thr-dehyd Threonine de 21.1 4.4E+02 0.0096 25.1 7.9 57 65-122 66-122 (304)
329 PRK12492 long-chain-fatty-acid 21.0 5.2E+02 0.011 27.2 9.2 88 38-125 225-321 (562)
330 cd00615 Orn_deC_like Ornithine 20.7 3.8E+02 0.0083 25.4 7.4 55 61-118 96-161 (294)
331 KOG1250 Threonine/serine dehyd 20.6 6.5E+02 0.014 25.1 8.4 54 69-122 118-171 (457)
332 COG2885 OmpA Outer membrane pr 20.5 2.7E+02 0.0059 24.3 5.8 64 6-70 91-160 (190)
333 PLN02238 hypoxanthine phosphor 20.4 2.6E+02 0.0055 24.6 5.5 22 38-59 10-31 (189)
334 PF01297 TroA: Periplasmic sol 20.3 3.8E+02 0.0082 24.8 7.1 85 42-130 127-218 (256)
335 PTZ00297 pantothenate kinase; 20.3 9.3E+02 0.02 29.2 11.3 97 208-310 457-556 (1452)
336 TIGR01747 diampropi_NH3ly diam 20.3 8.6E+02 0.019 24.2 12.2 106 17-123 25-152 (376)
No 1
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.1e-81 Score=628.70 Aligned_cols=518 Identities=42% Similarity=0.680 Sum_probs=445.6
Q ss_pred CCCCCCCCCCCChhhHHHHHhhcCCCC-ceEEECC---ccccHHHHHHHHHHHHHHHHhCC--CCCCCEEEEEcCCchhH
Q 008636 4 LKPNPANSCPLTPLGFIERAATACDDC-PSIIYND---TTYTWSQTYRRCLQLASSLSSFG--INPGHVVSVIAPNIPAM 77 (558)
Q Consensus 4 ~~~~~~~~~~~tl~~~l~~~a~~~p~~-~a~~~~~---~~~Ty~~l~~~v~~la~~L~~~G--v~~gd~V~i~~~~~~~~ 77 (558)
+-..+.+....+....+.+.+..++++ +++++.. +.+||+|++.++.++|..|.++| +++||+|++++||++++
T Consensus 6 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~ 85 (537)
T KOG1176|consen 6 LWKGPANNTPLTPITFLGRPAFVYLDRNTSLVYQDSDGRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEF 85 (537)
T ss_pred cccCcccCccccccccccccccccccCcceEEEecCCCcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHH
Confidence 344556666667666777777666666 7777754 89999999999999999999876 89999999999999999
Q ss_pred HHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCC
Q 008636 78 YELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPP 157 (558)
Q Consensus 78 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (558)
+.++|||+.+|+++.+++|.+.+.++...++.++++++|++.+..+.+.+...... ..++++.............
T Consensus 86 ~~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~kiif~d~~~~~~i~~~~~~~~-----~~i~~l~~~~~~~~~~~~~ 160 (537)
T KOG1176|consen 86 VELALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPKLIFVDEDFYDKISEATSKLA-----LKIIVLTGDEGVISISDLV 160 (537)
T ss_pred HHHHHHHHHcCccccccCcccCHHHHHHHHHhcCCeEEEEcCchHHHHHHHHhhcC-----CceEEEecccCcccccccc
Confidence 99999999999999999999999999999999999999999999999888766543 4455554431111100000
Q ss_pred CCCCCCCchhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEec
Q 008636 158 PRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTL 237 (558)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (558)
.. ...+..+...+.+.. ..+...+|++.++|||||||.||||.+||+++..+.......+.+...++.++.+
T Consensus 161 ~~------~~~~~~~~~~~~~~~--~~~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~~~~~~~v~l~~l 232 (537)
T KOG1176|consen 161 ED------LDAFEDLMPEGLPDG--IRPVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKIGWELTSDDVYLCTL 232 (537)
T ss_pred cc------ccchhhccccCCCcc--cccCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhhcccCCCCceEEEec
Confidence 00 111444444444443 4567889999999999999999999999999998888777777788899999999
Q ss_pred CchhhhhhhHHHHHHHhcce-EEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc--cccCCCCceEEEEecCCCC
Q 008636 238 PMFHNNGWSFTWGAAVVGAT-NVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRPVRILTAGSPPP 314 (558)
Q Consensus 238 p~~~~~g~~~~~~~l~~g~~-~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~--~~~~~~~l~~v~~~g~~l~ 314 (558)
|++|.+|+..++.+++.|++ +++.+.++++.+++.+++|++|++.++|.++..|++.+ ....+++++.+.+||++++
T Consensus 233 Pl~H~~Gl~~~~~~~~~~~~~ii~~~~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~~p~~~~~~l~sl~~v~~gga~~~ 312 (537)
T KOG1176|consen 233 PLFHIYGLITLLLSLLAGGTTIICLRKFDAELFLDLIEKYKVTHLFLVPPVLNMLAKSPIVKKYDLSSLRSVLSGGAPLS 312 (537)
T ss_pred hHHHHhHHHHHHHHHHhCCceEEECCCCCHHHHHHHHHHhCEEEEEcChHHHHHHhcCCccCcccCCccEEEEecCCCCC
Confidence 99999999888886665555 44555679999999999999999999999999999975 6688999999999999999
Q ss_pred hhhhHHhh-hcC-CeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCe
Q 008636 315 APVLLRTE-SLG-FIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQT 392 (558)
Q Consensus 315 ~~~~~~~~-~~~-~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~ 392 (558)
+++.+++. +++ ..+.+.||+||+|+.++.+.+.+. ...+++|.+.++. ...+.++ +|+.++++ +
T Consensus 313 ~~~~~~~~~~l~~~~v~q~YGmTE~~~~~~~~~~~~e----------~k~~svG~~~~g~-~~~v~~e-~g~~l~~~--~ 378 (537)
T KOG1176|consen 313 PATLEKVKERLPNVTVIQGYGMTEAGGLITSNDWGPE----------RKPGSVGRLLPGV-RVKVLDE-TGVSLGPN--Q 378 (537)
T ss_pred HHHHHHHHHhCCCceEEEeeccccccCceeecCCCcc----------CcccccCccccce-EEEeeCC-CCCCCCCC--C
Confidence 99999998 566 899999999999988888764321 5678999999965 6666655 89999999 7
Q ss_pred eeEEEEecccccccccCCchhhcccccC-CceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcce
Q 008636 393 RGEIVMRGGSLMLGYLKDPEATSKCMKD-GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNE 471 (558)
Q Consensus 393 ~Gel~v~~~~~~~gy~~~~~~~~~~~~~-g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~ 471 (558)
.||||++|+.++.||++||+.|++.|.+ |||+|||+|++|+||+|++.+|++|+||.+|++|+|.|||++|..||.|.|
T Consensus 379 ~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiGy~D~DG~l~IvdR~KdlIk~~G~qv~P~EiE~vL~~hP~V~e 458 (537)
T KOG1176|consen 379 TGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLGYFDEDGYLYIVDRSKDLIKYGGEQVSPAEIEAVLLTHPDVLE 458 (537)
T ss_pred ceEEEEECcccchhhcCChHHHHhhcccCCccccCceEEEcCCCeEEEecchhhheeeCCEEeCHHHHHHHHHhCCCccE
Confidence 7999999999999999999999999976 999999999999999999999999999999999999999999999999999
Q ss_pred eEEEeeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHhhc
Q 008636 472 AAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSM 551 (558)
Q Consensus 472 ~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~~ 551 (558)
|+|++.+++..|+.++|+|+.+++.. ..+++|++++++++++|++|..++|+++||+|++||++|+.||+++.+.
T Consensus 459 aaVvgipDe~~Ge~p~A~VV~k~g~~-----lte~di~~~v~k~l~~y~~~~~V~Fvd~lPKs~~GKi~R~~lr~~~~~~ 533 (537)
T KOG1176|consen 459 AAVVGIPDEVWGETPAAFVVLKKGST-----LTEKDIIEYVRKKLPAYKLPGGVVFVDELPKTPNGKILRRKLRDIAKKL 533 (537)
T ss_pred EEEEcccccccCCcceEEEEecCCCc-----CCHHHHHHHHHhhCChhhccCeEEEeccCCCCCcchHHHHHHHHHHHhc
Confidence 99999999999999999999998766 8999999999999999999999999999999999999999999999886
Q ss_pred cc
Q 008636 552 SM 553 (558)
Q Consensus 552 ~~ 553 (558)
..
T Consensus 534 ~~ 535 (537)
T KOG1176|consen 534 GS 535 (537)
T ss_pred cc
Confidence 54
No 2
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=6.2e-78 Score=558.77 Aligned_cols=514 Identities=27% Similarity=0.378 Sum_probs=441.1
Q ss_pred CCCCCChhhHHHHHhhcCCCCceEEEC--CccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhc
Q 008636 10 NSCPLTPLGFIERAATACDDCPSIIYN--DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMS 87 (558)
Q Consensus 10 ~~~~~tl~~~l~~~a~~~p~~~a~~~~--~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~ 87 (558)
+-...|+.++++..+++-||+.|+++. +.++||+|+.+.++++|.+|.+.|+++||||++..||+.+|+.++|||+++
T Consensus 46 pl~~~Tigq~l~~~t~~v~dkea~Vf~~eg~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w~l~~lA~A~A 125 (596)
T KOG1177|consen 46 PLDSETIGQLLETTTERVPDKEAAVFDHEGIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEWVLCQLACARA 125 (596)
T ss_pred CcccccHHHHHHHHhhccCcceEEEEeeccchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHHHHHHHHHHHh
Confidence 445679999999999999999999884 467999999999999999999999999999999999999999999999999
Q ss_pred CcEEEeccccCChHHHHHHHhhcCccEEEEeCc-----ChHHHHHHhhcCCCCC----------CCCcEEEEcCCccccC
Q 008636 88 GAIFNTINTRLDARTISIILKHSESKLVFVDHL-----SSSLLLEVVSLFPPHS----------KTPKLVLITDDKEISS 152 (558)
Q Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~-----~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~ 152 (558)
|.+.+++||.+...+++..|++.+++++|+.+. +...++++..+..... ....++..+++....
T Consensus 126 G~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ed~~~~- 204 (596)
T KOG1177|consen 126 GLVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADEDHPLP- 204 (596)
T ss_pred ceEEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCCCCcCC-
Confidence 999999999999999999999999999998642 3444555554443222 122333333222111
Q ss_pred CCCCCCCCCCCCchhhHHHhhcCCCCC----CC-CCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhccccccc
Q 008636 153 SSSPPPRIPPADFVDTYENMLAKGDPQ----FS-WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVV 227 (558)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~ 227 (558)
....+.+++...... .. ......+||++.|.|||||||.||++.+||.++.++.......+++
T Consensus 205 ------------Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~g~ 272 (596)
T KOG1177|consen 205 ------------GAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARAGY 272 (596)
T ss_pred ------------CceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHhCc
Confidence 123444444433221 11 1123568999999999999999999999999999999999999999
Q ss_pred CCCCEEEEecCchhhhhh-hHHHHHHHhcceEEEec-CCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc--cccCCCCc
Q 008636 228 PKQSVLLWTLPMFHNNGW-SFTWGAAVVGATNVCLR-KFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRP 303 (558)
Q Consensus 228 ~~~~~~~~~~p~~~~~g~-~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~--~~~~~~~l 303 (558)
+..+++.+..|++|..|. ...++++..|+++++.. .+++.+.+++|+++++|.++++|+++..|++.+ ....++++
T Consensus 273 ~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~~~~~s~l 352 (596)
T KOG1177|consen 273 NEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQQVDLSSL 352 (596)
T ss_pred CcceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcchhhccCchhhh
Confidence 999999999999999996 66889999999999965 699999999999999999999999999999988 55567899
Q ss_pred eEEEEecCCCChhhhHHhh-hcCC-eeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCC
Q 008636 304 VRILTAGSPPPAPVLLRTE-SLGF-IVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPE 381 (558)
Q Consensus 304 ~~v~~~g~~l~~~~~~~~~-~~~~-~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~ 381 (558)
|.+++||+++++++.+.+. +.+. .+...||+||+++..+....+ ........++|+..+.. +.+++|.
T Consensus 353 r~~vigGa~~s~eLlk~iv~~~~m~~i~v~YG~TEts~v~~~~~~~--------D~~~~~~ksVG~~m~h~-Ea~iv~~- 422 (596)
T KOG1177|consen 353 RKGVIGGAPVSPELLKLIVNQMNMKDIAVAYGLTETSPVLFMSLLG--------DPPEERIKSVGHLMDHY-EAAIVDK- 422 (596)
T ss_pred hhheeCCCCCCHHHHHHHHHhhCceeeEEEeeccccCcceeeecCC--------CCHHHHHhhhhhccccc-ccccccC-
Confidence 9999999999999999988 4444 377889999999887765532 22334556889888887 9999994
Q ss_pred CCcccCCCCCeeeEEEEecccccccccCCchhhcccc-cCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHH
Q 008636 382 TGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM-KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIE 460 (558)
Q Consensus 382 ~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE 460 (558)
.|..++.+ ..|||+++|.+.+.|||++++.+.+.. .|.||+|||+|.+|++|.+++.||++|+|+.+|++|+|.+||
T Consensus 423 ~g~~v~~~--~~Gel~iRGY~tMl~Ywg~~~kT~eti~~drW~~TGDi~~m~enG~i~iVGRskdmI~rGGENVyP~ElE 500 (596)
T KOG1177|consen 423 DGSEVPLG--TKGELLIRGYSTMLGYWGEEEKTKETIGNDRWYDTGDIAVMDENGTIEIVGRSKDMIIRGGENVYPTELE 500 (596)
T ss_pred CCCccccC--CCceEEEEechhheeecCCcccchhhcccccceecCceEEEcCCCcEEEEEcccCeEEeCCcccChHHHH
Confidence 89999999 679999999999999999988887766 688999999999999999999999999999999999999999
Q ss_pred HHHhcCCCcceeEEEeeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcch
Q 008636 461 SVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540 (558)
Q Consensus 461 ~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~ 540 (558)
+.|-+||.|.++.|+|++++..|+.++|+|.+..+.... ...++|+.+|+.++.+|++|+.|+++++||+|-+|||+
T Consensus 501 ~fL~~hp~V~~a~VVGV~D~R~GE~VCA~vRLqe~~e~~---~t~E~lKa~Ck~klaHFKiPky~vf~~~FPlT~tGKIq 577 (596)
T KOG1177|consen 501 DFLNKHPLVKEAHVVGVPDERLGEEVCACVRLQEGAEGK---TTAETLKAMCKGKLAHFKIPKYFVFVDEFPLTTTGKIQ 577 (596)
T ss_pred HHHhhCCCeeeEEEEccCCCcccceEEEEEEeecccccc---ccHHHHHHHHhcccccccCCcEEEEeccCcccccccch
Confidence 999999999999999999999999999999998886532 68999999999999999999999999999999999999
Q ss_pred hHHHHHHHhhc
Q 008636 541 KYVLGDIANSM 551 (558)
Q Consensus 541 r~~l~~~~~~~ 551 (558)
|.++|++.+..
T Consensus 578 KFeir~~~k~~ 588 (596)
T KOG1177|consen 578 KFEIREMSKGH 588 (596)
T ss_pred hHHHHHHHHhh
Confidence 99999998854
No 3
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=4.2e-77 Score=592.15 Aligned_cols=492 Identities=28% Similarity=0.345 Sum_probs=418.9
Q ss_pred HHHHHhhc-CCCCceEEECC-----ccccHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEE
Q 008636 19 FIERAATA-CDDCPSIIYND-----TTYTWSQTYRRCLQLASSLSS-FGINPGHVVSVIAPNIPAMYELHFAVPMSGAIF 91 (558)
Q Consensus 19 ~l~~~a~~-~p~~~a~~~~~-----~~~Ty~~l~~~v~~la~~L~~-~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 91 (558)
.++++... .+++.|+++.+ +.+||+||.+.+.++|+.|++ .|+ +||||+|++|+.+++++++|||+++|+++
T Consensus 14 ~~dr~~~~~~~~~~aii~~~e~~~~~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a~LA~~riGAI~ 92 (528)
T COG0365 14 ALDRHLEADRPDDTAIIFDGEDGLFRELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIALLATARIGAIP 92 (528)
T ss_pred hhhhhhhccCCCceEEEEEcCCCCceEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHHHHHHHHcCCEE
Confidence 46666553 46899999864 679999999999999999997 678 99999999999999999999999999999
Q ss_pred EeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhHHH
Q 008636 92 NTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYEN 171 (558)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (558)
+++.+.++++.+...+++++++++|+++......+..............+++..... ..|.+
T Consensus 93 ~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~~iv~~r~~------------------~~~~~ 154 (528)
T COG0365 93 AVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSSVVVVPRLG------------------LWYDE 154 (528)
T ss_pred eecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcceEEecccc------------------ccHHH
Confidence 999999999999999999999999998766544332211110000011122222221 45566
Q ss_pred hhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhccc-ccccCCCCEEEEecCchhhhhhh-HHH
Q 008636 172 MLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLI-DWVVPKQSVLLWTLPMFHNNGWS-FTW 249 (558)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~g~~-~~~ 249 (558)
........+.... .+.+|+++++|||||||+||+|+++|.++......... .+.+.++|++.+..++.|++|.+ .++
T Consensus 155 ~~~~~~~~~~~~~-~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~~~~~Dv~w~~ad~GW~~g~~~~v~ 233 (528)
T COG0365 155 AVEKASEKFEFEP-LPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGDLLPGDRFWNSSDPGWIYGLWYSVF 233 (528)
T ss_pred HhhccCCCCCccc-cCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhCCCCCCEEEeCCCchhhhCchHHHH
Confidence 6655444444333 78999999999999999999999999988776665554 56777999999999999999985 599
Q ss_pred HHHHhcceEEEecC--C-CHHHHHHHHHHhCCcEEEehHHHHHHHhcCc--cccCCCCceEEEEecCCCChhhhHHhh-h
Q 008636 250 GAAVVGATNVCLRK--F-DAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRPVRILTAGSPPPAPVLLRTE-S 323 (558)
Q Consensus 250 ~~l~~g~~~~~~~~--~-~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~--~~~~~~~l~~v~~~g~~l~~~~~~~~~-~ 323 (558)
+++..|+++++... + +++.+++.++++++|.+++.|+.++.|.+.. ...++++||.+.+.||+++++.++++. .
T Consensus 234 ~pL~~Gat~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~~~~~dlssLr~~~SaGEPLnpe~~~w~~~~ 313 (528)
T COG0365 234 SPLASGATTVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKLGLGEPYDLSSLRVLGSAGEPLNPEAFEWFYSA 313 (528)
T ss_pred HHHhcCCeEEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhcCCcccccchhheeeeccCCCCCHHHHHHHHHH
Confidence 99999999999863 3 4999999999999999999999999999886 567799999999999999999999999 5
Q ss_pred cCCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecc--
Q 008636 324 LGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGG-- 401 (558)
Q Consensus 324 ~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~-- 401 (558)
+|+++.+.||+||+|++...... ....++.|.|.+|. ++.++|++ |++++++ + |+|+++.+
T Consensus 314 ~g~~i~d~~gqTEtg~~~~~~~~------------~~~~g~~g~p~pG~-~~~vvdd~-g~~~~~~--~-G~Lvi~~~~p 376 (528)
T COG0365 314 LGVWILDIYGQTETGMGFIAGRP------------PVKNGSSGLPLPGY-AVRRVDDE-GNPVPPG--V-GELVVRLPWP 376 (528)
T ss_pred hCCCEeccccccccCccccCCCC------------CcCCCCCCCCCCCc-eeEEECCC-CCcCCCC--c-eEEEEeCCCc
Confidence 69999999999999965554331 12334559999999 99999996 9999988 6 99999998
Q ss_pred cccccccCCchhhcccccCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCCC
Q 008636 402 SLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481 (558)
Q Consensus 402 ~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~ 481 (558)
+++++||++|+.+.+.+-+.||.|||.+++|+||+++++||.||+||+.|.+|.+.|||++|.+||.|.||+|++.+++.
T Consensus 377 ~~~~~~w~d~er~~~~y~~~~y~tGD~~~~DedGy~~i~GR~DDvI~vsG~Rig~~EvE~~l~~hP~VaEaAvVg~pd~~ 456 (528)
T COG0365 377 GMALTYWNDPERYKEAYFGRWYRTGDWAERDEDGYFWLHGRSDDVIKVSGKRIGPLEIESVLLAHPAVAEAAVVGVPDPG 456 (528)
T ss_pred hhhhhhhCCHHHHHHHHhhceeecCceeEEccCCCEEEEeeccceEeccCeeccHHHHHHHHHhCcceeeeEEEeccCCC
Confidence 89999999999998888666999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHhh
Q 008636 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANS 550 (558)
Q Consensus 482 ~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~ 550 (558)
.|+.+++||+++++...+ ...++|++++++.+.++..|+.|+++++||+|.||||.|+.||+++.+
T Consensus 457 kg~~v~afVvL~~g~~~~---~L~~ei~~~vr~~~~~~~~p~~i~fv~~LPkT~sGKI~R~~lr~~~~~ 522 (528)
T COG0365 457 KGQIVLAFVVLAAGVEPN---ELAEEIRRHVARNIGPHAIPRKIRFVDELPKTASGKIQRRLLRKILHK 522 (528)
T ss_pred CCcEEEEEEEecCCCChH---HHHHHHHHHHHhccCcccCCceEEEecCCCCCCcccHHHHHHHHHHhh
Confidence 999999999999987533 567788888888888899999999999999999999999999999884
No 4
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=5.5e-75 Score=602.91 Aligned_cols=510 Identities=36% Similarity=0.506 Sum_probs=433.9
Q ss_pred CCCCCCCChhhHHHHHhhcCCCCceEEECCcc--ccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHh
Q 008636 8 PANSCPLTPLGFIERAATACDDCPSIIYNDTT--YTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVP 85 (558)
Q Consensus 8 ~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~--~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~ 85 (558)
.......++.+.++++++.+|+++|+.+.+.. +||+||.+++.++|.+|++.|+++||+|+|+++|++++++++|||+
T Consensus 5 ~~~~~~~~~~~~l~~~a~~~~~~~a~~~~~~~~~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~~~~~a~~ 84 (534)
T COG0318 5 MRMTAELTLASLLERAARRNPDRPALIFLGRGGRLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFLIAFLAAL 84 (534)
T ss_pred ccccccccHHHHHHHHHHhCCCceEEEEcCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 44566789999999999999999999998877 9999999999999999999999999999999999999999999999
Q ss_pred hcCcEEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCc
Q 008636 86 MSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADF 165 (558)
Q Consensus 86 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (558)
++|++++|++|.+...++.++++.+++++++++.+....+........ ....+..........
T Consensus 85 ~~Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-------------- 147 (534)
T COG0318 85 RAGAVAVPLNPRLTPRELAYILNDAGAKVLITSAEFAALLEAVAEALP---VVLVVLLVGDADDRL-------------- 147 (534)
T ss_pred hcCEEEeecCcccCHHHHHHHHHhcCCeEEEEcccchhHHHHHhccCC---cceEEEecccccccc--------------
Confidence 999999999999999999999999999999999884444444433221 111111111111000
Q ss_pred hhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccc--cCCCCEEEEecCchhhh
Q 008636 166 VDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWV--VPKQSVLLWTLPMFHNN 243 (558)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~p~~~~~ 243 (558)
...++++...............++++++++|||||||.||+|++||+++..+.......+. +...|++++.+|++|..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~ 227 (534)
T COG0318 148 PITLEALAAEGPGPDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGGLTPDDVVLSWLPLFHIF 227 (534)
T ss_pred cccHHHHhhccCCcccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcccCCCCceEEEecChHHHH
Confidence 0234555333322222222367899999999999999999999999999988888877777 89999999999999999
Q ss_pred hhhHHHHH-HHhcceEEEec--CCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCcccc--CCCC-ceEEEEecCCCChhh
Q 008636 244 GWSFTWGA-AVVGATNVCLR--KFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK--QLDR-PVRILTAGSPPPAPV 317 (558)
Q Consensus 244 g~~~~~~~-l~~g~~~~~~~--~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~--~~~~-l~~v~~~g~~l~~~~ 317 (558)
|+...+.+ ++.|+++++.+ .++++.++..+.++++|++.++|+++..|++..... .... +|.++.||+++++++
T Consensus 228 Gl~~~~~~~~~~G~~~v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~~~~~~~~lr~~~~gg~~~~~~~ 307 (534)
T COG0318 228 GLIVGLLAPLLGGGTLVLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKDDDDLSSSLRLVLSGGAPLPPEL 307 (534)
T ss_pred HHHHHHHHHHHcCCEEEeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCccCccccccceEEEEecCCcCCHHH
Confidence 99765555 88899998888 589999999999999999999999999999887333 3444 999999999999999
Q ss_pred hHHhh-hcC-CeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeE
Q 008636 318 LLRTE-SLG-FIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGE 395 (558)
Q Consensus 318 ~~~~~-~~~-~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Ge 395 (558)
++++. .++ ..+.+.||+||++++++...... . ....+.+|.+.+++ +++|+|++++.+++ + ++||
T Consensus 308 ~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~-~--------~~~~~~~G~~~pg~-~v~Ivd~~~~~~~p-g--~vGe 374 (534)
T COG0318 308 LERFEERFGPIAILEGYGLTETSPVVTINPPDD-L--------LAKPGSVGRPLPGV-EVRIVDPDGGEVLP-G--EVGE 374 (534)
T ss_pred HHHHHHHhCCCceEEeecccccCceeecCCCch-h--------hhcCCcccccCCCc-EEEEEeCCCCccCC-C--CceE
Confidence 99999 555 57999999999998777654222 0 23445668999998 99999986665555 4 6899
Q ss_pred EEEecccccccccCCchhhcccccC-CceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEE
Q 008636 396 IVMRGGSLMLGYLKDPEATSKCMKD-GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAV 474 (558)
Q Consensus 396 l~v~~~~~~~gy~~~~~~~~~~~~~-g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v 474 (558)
|+++||+++.|||++|+.+...|.+ |||+|||+|++|++|++++.||.+|+|+.+|++|+|.+||+++.++|.|.+++|
T Consensus 375 i~irgp~v~~GY~~~pe~t~~~f~~~gW~~TGDlg~~d~~G~l~i~gR~kd~I~~gG~ni~p~eiE~~l~~~~~V~~aav 454 (534)
T COG0318 375 IWVRGPNVMKGYWNRPEATAEAFDEDGWLRTGDLGYVDEDGYLYIVGRLKDLIISGGENIYPEEIEAVLAEHPAVAEAAV 454 (534)
T ss_pred EEEECchhhhhhcCChHHHHHhhccCCeeeecceEEEcCCccEEEEeccceEEEeCCeEECHHHHHHHHHhCCCcceEEE
Confidence 9999999999999999999988875 999999999999999999999999999999999999999999999999999999
Q ss_pred EeeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHhh
Q 008636 475 VGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANS 550 (558)
Q Consensus 475 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~ 550 (558)
++++++.+|+.++++++++++.. ...+.+++.++++.+++.+++|+.+++++++|+|++||++|+.|++.+.+
T Consensus 455 vgvpd~~~Ge~~~a~v~~~~~~~---~~~~~~~i~~~~~~~l~~~~~P~~v~~v~~lP~t~sGKi~r~~lr~~~~~ 527 (534)
T COG0318 455 VGVPDERWGERVVAVVVLKPGGD---AELTAEELRAFLRKRLALYKVPRIVVFVDELPRTASGKIDRRALREEYRA 527 (534)
T ss_pred EeCCCCccCceEEEEEEEcCCCC---CCCCHHHHHHHHHhhhhcccCCeEEEEeCCCCCCCchhhhHHHHHHHHHh
Confidence 99999999999999999988742 11488999999999999999999999999999999999999999999887
No 5
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=3.1e-71 Score=583.20 Aligned_cols=543 Identities=49% Similarity=0.858 Sum_probs=432.9
Q ss_pred CCCCCCCCCCCCCCChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHH
Q 008636 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYEL 80 (558)
Q Consensus 1 ~~~~~~~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~ 80 (558)
||.+-.-..+.++.|+.++|++.++.+|+++|+.+.+.++||+||.+++.++|+.|.++|+++||+|+|+++|+++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~Al~~~~~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~~~ 80 (579)
T PLN03102 1 MDNLALCEANNVPLTPITFLKRASECYPNRTSIIYGKTRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMYEM 80 (579)
T ss_pred CCCccCCccccccccHHHHHHHHHHhCCCCeEEEECCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHH
Confidence 45555556667778999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCC--CCCcEEEEcCCccccCCCCCCC
Q 008636 81 HFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHS--KTPKLVLITDDKEISSSSSPPP 158 (558)
Q Consensus 81 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 158 (558)
+|||+++|++++|+++.++.+++.++++.++++++|++++....+.+......... ....++.++...... .+
T Consensus 81 ~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~- 155 (579)
T PLN03102 81 HFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFVDRSFEPLAREVLHLLSSEDSNLNLPVIFIHEIDFPK----RP- 155 (579)
T ss_pred HHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEEEChhhHHHHHHHHhhccccccccCceEEEeccccccc----CC-
Confidence 99999999999999999999999999999999999998887766665544322110 112333333211100 00
Q ss_pred CCCCCCchhhHHHhhcCCCCCCCC----CCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEE
Q 008636 159 RIPPADFVDTYENMLAKGDPQFSW----VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLL 234 (558)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~ 234 (558)
......+.++++........ .....++++++|+|||||||.||+|.++|+++..........+.+...++++
T Consensus 156 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l 231 (579)
T PLN03102 156 ----SSEELDYECLIQRGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGWEMGTCPVYL 231 (579)
T ss_pred ----cccccCHHHHHhccCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhcCCCCCCeEE
Confidence 00123344444332221110 1123568999999999999999999999999765544444445566778899
Q ss_pred EecCchhhhhhhHHHHHHHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCcc--ccCCCCceEEEEecCC
Q 008636 235 WTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE--AKQLDRPVRILTAGSP 312 (558)
Q Consensus 235 ~~~p~~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~--~~~~~~l~~v~~~g~~ 312 (558)
..+|++|..++...+.++..|+++++...+++..+++.|+++++|++.++|+++..|.+... ....++++.+++||++
T Consensus 232 ~~~pl~h~~g~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~gg~~ 311 (579)
T PLN03102 232 WTLPMFHCNGWTFTWGTAARGGTSVCMRHVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLDLSPRSGPVHVLTGGSP 311 (579)
T ss_pred ecCChhhhcchhHHHHHHHhcCcEEeeccCChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccccCCcccceEEEECCCC
Confidence 99999999998877888899999999988899999999999999999999999999988652 2234578889999999
Q ss_pred CChhhhHHhhhcCCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCe
Q 008636 313 PPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQT 392 (558)
Q Consensus 313 l~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~ 392 (558)
++..+...++++++++++.||+||+++.+..+.....+...+...........|.+..+...+++.+.+.++.++.++++
T Consensus 312 ~~~~~~~~~~~~g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~i~~~~~~~~v~~~~~~ 391 (579)
T PLN03102 312 PPAALVKKVQRLGFQVMHAYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGLADVDVKNKETQESVPRDGKT 391 (579)
T ss_pred CCHHHHHHHHHcCCeEEeecCccccCccccccccccccccCCcccccccccCCCcccccccceEEeccccccccCCCCCC
Confidence 99999999888899999999999998765544322222111111111111233444344446778887677777765546
Q ss_pred eeEEEEecccccccccCCchhhcccccCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCccee
Q 008636 393 RGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEA 472 (558)
Q Consensus 393 ~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~ 472 (558)
.|||+++|++++.|||++++.+...|.+|||+|||+|++|+||.+++.||.+|+|+.+|.+|+|.+||+.|.++|.|.++
T Consensus 392 ~GEl~v~g~~~~~GY~~~~~~t~~~f~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~a 471 (579)
T PLN03102 392 MGEIVIKGSSIMKGYLKNPKATSEAFKHGWLNTGDVGVIHPDGHVEIKDRSKDIIISGGENISSVEVENVLYKYPKVLET 471 (579)
T ss_pred ceEEEEECcchhhhhcCChhhhHhhhccCceecCceEEEcCCCeEEEEeccCcEEEECCEEECHHHHHHHHHhCCCccee
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeeCCCCCceeEEEEEecCCCCCCC-----CCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHH
Q 008636 473 AVVGRPDPFWQEIPCAFVSLKTGTDSGG-----MMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDI 547 (558)
Q Consensus 473 ~v~~~~~~~~~~~~~~~v~~~~~~~~~~-----~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~ 547 (558)
+|++++++..++.++++|++.++....+ ......+++++++++|++|++|..++++++||+|++||++|++|+++
T Consensus 472 ~vv~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~~~P~~i~~~~~~P~t~~gKi~r~~L~~~ 551 (579)
T PLN03102 472 AVVAMPHPTWGETPCAFVVLEKGETTKEDRVDKLVTRERDLIEYCRENLPHFMCPRKVVFLQELPKNGNGKILKPKLRDI 551 (579)
T ss_pred EEEeccCccccceeEEEEEecCcccccccccccccccHHHHHHHHHhhcccccCCeEEEEcccCCCCCcccccHHHHHHH
Confidence 9999999988999999999876543211 01246789999999999999999999999999999999999999999
Q ss_pred Hhhcc
Q 008636 548 ANSMS 552 (558)
Q Consensus 548 ~~~~~ 552 (558)
++++.
T Consensus 552 ~~~~~ 556 (579)
T PLN03102 552 AKGLV 556 (579)
T ss_pred HHHhh
Confidence 87753
No 6
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.5e-71 Score=582.64 Aligned_cols=494 Identities=28% Similarity=0.377 Sum_probs=422.5
Q ss_pred ChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEec
Q 008636 15 TPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTI 94 (558)
Q Consensus 15 tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 94 (558)
++.++|+++++.+|+++|+++.++.+||+||.+++.++|++|.+.|+++||+|+++++|++++++++|||+++|++++|+
T Consensus 50 ~~~~~~~~~a~~~pd~~Al~~~~~~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~v~l 129 (549)
T PRK07788 50 PFAGLVAHAARRAPDRAALIDERGTLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGFVLALYAAGKVGARIILL 129 (549)
T ss_pred hHHHHHHHHHHHCCCceEEEECCCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEEEEe
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhHHHhhc
Q 008636 95 NTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLA 174 (558)
Q Consensus 95 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (558)
++.++.+++..+++.++++++|++.+....+.++..... ....+........ .....+..+.++..
T Consensus 130 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~----------~~~~~~~~~~~~~~ 195 (549)
T PRK07788 130 NTGFSGPQLAEVAAREGVKALVYDDEFTDLLSALPPDLG----RLRAWGGNPDDDE----------PSGSTDETLDDLIA 195 (549)
T ss_pred CCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhhccccc----cceEEEEecCccc----------cCCcCcccHHHHhc
Confidence 999999999999999999999999877666554322111 1111111111100 00112355666655
Q ss_pred CCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhhhHHHHHHHh
Q 008636 175 KGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVV 254 (558)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~ 254 (558)
..... ..+...+++++++|||||||.||+|.++|+++..........+.+..++++++..|++|..|+..++.++..
T Consensus 196 ~~~~~---~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~l~~ 272 (549)
T PRK07788 196 GSSTA---PLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRVPFRAGETTLLPAPMFHATGWAHLTLAMAL 272 (549)
T ss_pred CCCCC---CCCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhCCCCcCCeEEEccchHHHHHHHHHHHHHHh
Confidence 43221 122345688999999999999999999999998877766677788899999999999999999888889999
Q ss_pred cceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCcc----ccCCCCceEEEEecCCCChhhhHHhh-hcCCeee
Q 008636 255 GATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE----AKQLDRPVRILTAGSPPPAPVLLRTE-SLGFIVS 329 (558)
Q Consensus 255 g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~----~~~~~~l~~v~~~g~~l~~~~~~~~~-~~~~~v~ 329 (558)
|+++++...+++..+++.++++++|++.++|+++..+++... ...++++|.+++||+++++++.+++. .++..++
T Consensus 273 G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~l~ 352 (549)
T PRK07788 273 GSTVVLRRRFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAKYDTSSLKIIFVSGSALSPELATRALEAFGPVLY 352 (549)
T ss_pred CCEEEECCCCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCCCCCCceeEEEEeCCCCCHHHHHHHHHHhCccce
Confidence 999999888899999999999999999999999999987652 33577999999999999999999998 4688999
Q ss_pred ecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecccccccccC
Q 008636 330 HGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLK 409 (558)
Q Consensus 330 ~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~ 409 (558)
+.||+||++.++..+. ........++|.|.+++ +++|+|+ ++++++.| +.|||+++|+.++.||++
T Consensus 353 ~~YG~TE~~~~~~~~~----------~~~~~~~~~vG~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~g~~~~~gY~~ 418 (549)
T PRK07788 353 NLYGSTEVAFATIATP----------EDLAEAPGTVGRPPKGV-TVKILDE-NGNEVPRG--VVGRIFVGNGFPFEGYTD 418 (549)
T ss_pred eccCcchhchhhccCh----------hhhhhcCCCcccCCCCc-EEEEECC-CcCCCCCC--CeEEEEEeCCCccccccC
Confidence 9999999986554332 11122346799999998 9999997 68888887 889999999999999999
Q ss_pred CchhhcccccCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCCCCCceeEEE
Q 008636 410 DPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAF 489 (558)
Q Consensus 410 ~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~ 489 (558)
++.. ...+|||+|||+|+++++|.+++.||+||+||++|++|+|.+||+.|.++|+|.+++|++.+++..|+.++++
T Consensus 419 ~~~~---~~~~g~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~ 495 (549)
T PRK07788 419 GRDK---QIIDGLLSSGDVGYFDEDGLLFVDGRDDDMIVSGGENVFPAEVEDLLAGHPDVVEAAVIGVDDEEFGQRLRAF 495 (549)
T ss_pred CCcc---cccCCceecCceEEEcCCCCEEEeccCcceEEECCEEECHHHHHHHHHhCCCeeEEEEECCcCcccccEEEEE
Confidence 8765 2348999999999999999999999999999999999999999999999999999999999999889999999
Q ss_pred EEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHH
Q 008636 490 VSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDI 547 (558)
Q Consensus 490 v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~ 547 (558)
|++.++.. .+.++++++++++|++|++|..++++++||+|++||++|++|+++
T Consensus 496 vv~~~~~~-----~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~ 548 (549)
T PRK07788 496 VVKAPGAA-----LDEDAIKDYVRDNLARYKVPRDVVFLDELPRNPTGKVLKRELREM 548 (549)
T ss_pred EEeCCCCC-----CCHHHHHHHHHHhhhcCCCCcEEEEeCCCCCCCCcCEeHHHhhcc
Confidence 99877644 678899999999999999999999999999999999999999864
No 7
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=4e-71 Score=587.22 Aligned_cols=520 Identities=21% Similarity=0.278 Sum_probs=408.3
Q ss_pred hhhHHHHHhhc--CCCCceEEEC------CccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhc
Q 008636 16 PLGFIERAATA--CDDCPSIIYN------DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMS 87 (558)
Q Consensus 16 l~~~l~~~a~~--~p~~~a~~~~------~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~ 87 (558)
..++|+++++. +|+++|+++. .+++||+||.+++.++|+.|+++|+++||+|+++++|++++++++|||+++
T Consensus 61 ~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~~~~lA~~~~ 140 (647)
T PTZ00237 61 CYNVLDIHVKNPLKRDQDALIYECPYLKKTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPLIAMLSCARI 140 (647)
T ss_pred HHHHHHHhhcccCCCCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHh
Confidence 35667777754 7999999873 358999999999999999999999999999999999999999999999999
Q ss_pred CcEEEeccccCChHHHHHHHhhcCccEEEEeCc---------ChHHHHHHhhcCCCCCCCCcEEEEcCCcccc-CCCCCC
Q 008636 88 GAIFNTINTRLDARTISIILKHSESKLVFVDHL---------SSSLLLEVVSLFPPHSKTPKLVLITDDKEIS-SSSSPP 157 (558)
Q Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 157 (558)
|++++|+++.++.+++.+++++++++++|+++. ....+.++..... . ...+++......... ......
T Consensus 141 Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~vi~~~~~~~~~~~~~~~~ 218 (647)
T PTZ00237 141 GATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIELST-F-KPSNVITLFRNDITSESDLKKI 218 (647)
T ss_pred CcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhccc-C-CCCEEEEEEcCCcccccccccc
Confidence 999999999999999999999999999999752 2223333332111 0 123444332211000 000000
Q ss_pred CCCCCCCchhhHHHhhcCC----CCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHH-hcccccccCCCCE
Q 008636 158 PRIPPADFVDTYENMLAKG----DPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAV-DSLIDWVVPKQSV 232 (558)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~-~~~~~~~~~~~~~ 232 (558)
......+....|.+++... ........+..++++++|+|||||||.||+|+++|.+.+.... .....+....+++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~~~~~d~ 298 (647)
T PTZ00237 219 ETIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRSIIEKDIPTV 298 (647)
T ss_pred cccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHHhcCCCCCcE
Confidence 0000001123355544321 1111112345678999999999999999999999998433332 2233345677899
Q ss_pred EEEecCchhhhhhhHHHHHHHhcceEEEecC--CC----HHHHHHHHHHhCCcEEEehHHHHHHHhcCc-------cccC
Q 008636 233 LLWTLPMFHNNGWSFTWGAAVVGATNVCLRK--FD----APTVFALIRKHGVTHMCGAPIVLNLLSSSP-------EAKQ 299 (558)
Q Consensus 233 ~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~--~~----~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~-------~~~~ 299 (558)
+++..|++|+.+...++.+++.|+++++.+. .. +..+++.++++++|++.++|++++.|.+.. ....
T Consensus 299 ~~~~~~~~w~~~~~~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~ 378 (647)
T PTZ00237 299 VFSHSSIGWVSFHGFLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPEATIIRSKYD 378 (647)
T ss_pred EEEcCCCceEeeHHHHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCccccccccccC
Confidence 9999999998777778899999999998764 12 688999999999999999999999998753 1235
Q ss_pred CCCceEEEEecCCCChhhhHHhh-hcCCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEe
Q 008636 300 LDRPVRILTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIV 378 (558)
Q Consensus 300 ~~~l~~v~~~g~~l~~~~~~~~~-~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~ 378 (558)
++++|.++++|+++++++.++++ .+++++++.||+||+++..+..... .....+++|.|.+++ +++|+
T Consensus 379 l~~Lr~i~~~G~~l~~~~~~~~~~~~g~~i~~~yG~TE~~~~~~~~~~~----------~~~~~~s~G~p~~g~-~~~i~ 447 (647)
T PTZ00237 379 LSNLKEIWCGGEVIEESIPEYIENKLKIKSSRGYGQTEIGITYLYCYGH----------INIPYNATGVPSIFI-KPSIL 447 (647)
T ss_pred cchheEEEecCccCCHHHHHHHHHhcCCCEEeeechHHhChhhhccCCC----------CCCCCCCCccCcCCc-eEEEE
Confidence 78999999999999999999988 4699999999999998655432210 112236889999998 99999
Q ss_pred CCCCCcccCCCCCeeeEEEEecc---cccccccCCchhhccccc--CCceeeCceeEEccCCcEEEecccCCeeeeCcee
Q 008636 379 DPETGLSVKRDGQTRGEIVMRGG---SLMLGYLKDPEATSKCMK--DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGEN 453 (558)
Q Consensus 379 d~~~~~~~~~~~~~~Gel~v~~~---~~~~gy~~~~~~~~~~~~--~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~ 453 (558)
|+ +|++++.+ +.|||++++| +++.|||++++.+...|. +|||+|||+|++|++|++++.||+||+||++|++
T Consensus 448 d~-~g~~~~~g--e~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~~~g~~~TGDlg~~d~dG~l~i~GR~dd~i~~~G~r 524 (647)
T PTZ00237 448 SE-DGKELNVN--EIGEVAFKLPMPPSFATTFYKNDEKFKQLFSKFPGYYNSGDLGFKDENGYYTIVSRSDDQIKISGNK 524 (647)
T ss_pred CC-CCCCCCCC--CceEEEEeccCCchhhCceeCCHHHHHHHHhCCCCEEECCcEEEECCCCeEEEEeccCCEEEECCEE
Confidence 97 78888877 7899999986 789999999998887774 7999999999999999999999999999999999
Q ss_pred echHHHHHHHhcCCCcceeEEEeeeCCCCCceeEEEEEecCCCCCCC--CCCCHHHHHHHHHhcCCCccccCeEEEeccc
Q 008636 454 ISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGG--MMTTEKDIIQYCRARIPRYMVPKTVVFIDEL 531 (558)
Q Consensus 454 v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~ 531 (558)
|+|.+||++|.+||.|.+++|++++++..|+.++++|++.++..... .....++|+++++++|+++++|+.|+++++|
T Consensus 525 I~p~eIE~~l~~~p~V~eaavvg~~~~~~g~~~~a~Vv~~~~~~~~~~~~~~l~~~i~~~~~~~l~~~~~P~~i~~v~~l 604 (647)
T PTZ00237 525 VQLNTIETSILKHPLVLECCSIGIYDPDCYNVPIGLLVLKQDQSNQSIDLNKLKNEINNIITQDIESLAVLRKIIIVNQL 604 (647)
T ss_pred eCHHHHHHHHHhCCCceeeEEEeeEcCCCCCEEEEEEEeccCccccCCCHHHHHHHHHHHHHhhcCccccCcEEEEcCCC
Confidence 99999999999999999999999999999999999999875422110 0012356788889999999999999999999
Q ss_pred CCCCCCcchhHHHHHHHhhc
Q 008636 532 PKTATGKVQKYVLGDIANSM 551 (558)
Q Consensus 532 P~t~~GK~~r~~l~~~~~~~ 551 (558)
|+|++||++|+.|++++.+.
T Consensus 605 P~T~sGKi~R~~Lr~~~~~~ 624 (647)
T PTZ00237 605 PKTKTGKIPRQIISKFLNDS 624 (647)
T ss_pred CCCCCccEeHHHHHHHHcCC
Confidence 99999999999999998654
No 8
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.1e-72 Score=508.19 Aligned_cols=504 Identities=27% Similarity=0.365 Sum_probs=441.3
Q ss_pred CCCCChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcE
Q 008636 11 SCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAI 90 (558)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (558)
+++.++.++|.++|.++||++|+++.++.+||++|.++++++|.+|++.|+++||+|.+-+||..++++++||++++|++
T Consensus 25 W~d~~l~d~L~~~A~~~pdriAv~d~~~~~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~~ef~~~~FALlrlGv~ 104 (542)
T COG1021 25 WQDRTLTDILTDHAARYPDRIAVIDGERRLSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNVAEFYITFFALLRLGVA 104 (542)
T ss_pred ccCCcHHHHHHHHHhhcCCceEEecCcccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCchHHHHHHHHHHHHcCcc
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccccCChHHHHHHHhhcCccEEEEeCc-----ChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCc
Q 008636 91 FNTINTRLDARTISIILKHSESKLVFVDHL-----SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADF 165 (558)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (558)
+|.-=|+.-..+|..+.+...++..|++.. ..+...+.....+ ....+++. .+.+.
T Consensus 105 PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~---tlr~v~v~-ge~~~--------------- 165 (542)
T COG1021 105 PVLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHP---TLRHVIVA-GEAEH--------------- 165 (542)
T ss_pred hhhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCC---cceEEEEc-cCCCC---------------
Confidence 999999999999999999999999998652 2333444443332 23344444 43322
Q ss_pred hhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhh
Q 008636 166 VDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGW 245 (558)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~ 245 (558)
.......+......+.+..+.+++++++...+.||||.||.|..||.....+.......-+++..++.++.+|..|.+.+
T Consensus 166 ~~~~~~~~~~~a~~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC~~~~~tvyL~~LP~AHNfpl 245 (542)
T COG1021 166 PSVLEAALCHPAGLFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEICGFDQQTVYLCALPAAHNFPL 245 (542)
T ss_pred cchhhhhhhCccccCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhhCcCccceEEEecccccCCCC
Confidence 12233344444445555566788899999999999999999999999998888888888889999999999999999888
Q ss_pred h--HHHHHHHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc--cccCCCCceEEEEecCCCChhhhHHh
Q 008636 246 S--FTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRPVRILTAGSPPPAPVLLRT 321 (558)
Q Consensus 246 ~--~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~--~~~~~~~l~~v~~~g~~l~~~~~~~~ 321 (558)
. ..++.+..|+++|+.+..+|+....+|+++++|+...+|.....+++.. ....+++||.+-+||..+++.+.+++
T Consensus 246 ssPG~LGv~~agG~VVla~~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~~~~~LsSLrllQVGGarl~~~~Arrv 325 (542)
T COG1021 246 SSPGALGVFLAGGTVVLAPDPSPELCFPLIERHGVTVTALVPPLASLWLQAAEWERADLSSLRLLQVGGARLSATLARRV 325 (542)
T ss_pred CCcchhheeeeccEEEECCCCCHHHHHHHHHHhccceEEeccHHHHHHHHhhhcccCCchheeEEeecCcccCHHHHhhc
Confidence 4 4889999999999999999999999999999999999999888887776 56779999999999999999999999
Q ss_pred h-hcCCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEec
Q 008636 322 E-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRG 400 (558)
Q Consensus 322 ~-~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~ 400 (558)
. .+|+.+-+.|||.| |.+.+....+ .........|+|+.+..+++|+|. +|+++.+| ++|+|..+|
T Consensus 326 ~~~lgC~LQQVFGMAE-GLvnyTRLDD---------p~E~i~~TQGrPlsP~DEvrvvD~-dg~pv~pG--E~G~LltRG 392 (542)
T COG1021 326 PAVLGCQLQQVFGMAE-GLVNYTRLDD---------PPEIIIHTQGRPLSPDDEVRVVDA-DGNPVAPG--EVGELLTRG 392 (542)
T ss_pred hhhhCchHHHHhhhhh-hhhcccccCC---------chHheeecCCCcCCCcceeEEecC-CCCCCCCC--CcceeeecC
Confidence 8 67999999999999 4444433211 123345578999999999999998 89999999 899999999
Q ss_pred ccccccccCCchhhcccc-cCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeC
Q 008636 401 GSLMLGYLKDPEATSKCM-KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479 (558)
Q Consensus 401 ~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~ 479 (558)
|..++|||+.|+-+...| .+|+|+|||+++.+++|++.+.||.+|+|+.+|+||-.++||+.|.+||.|.+++++..++
T Consensus 393 PYTirGYyrap~HNa~aF~a~GFYrsGD~V~~~~dGyl~V~GR~KDQINRgGEKIAAeEvEn~LL~HP~V~~AAlVampD 472 (542)
T COG1021 393 PYTIRGYYRAPEHNARAFDADGFYRSGDLVRRDPDGYLVVEGRVKDQINRGGEKIAAEEVENLLLRHPAVHDAALVAMPD 472 (542)
T ss_pred CeeeeeeccCchhhhhccCcCCceecCceeEecCCceEEEEeeehhhhccccchhhHHHHHHHHhhCchhhhhhhhcCch
Confidence 999999999999999999 6999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhc-CCCccccCeEEEecccCCCCCCcchhHHHHHHHhhcc
Q 008636 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRAR-IPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSMS 552 (558)
Q Consensus 480 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~-l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~~~ 552 (558)
+..|++.+++|+.++.. ....++++++.+. +..|++|++|.+++.+|.|+-|||++++|++.+....
T Consensus 473 elLGEksCAfiv~~~~~------~~~~qlr~~L~~~GlAa~K~PDrie~v~~~P~T~VGKIdKk~Lr~~l~~~~ 540 (542)
T COG1021 473 ELLGEKSCAFIVVKEPP------LRAAQLRRFLRERGLAAFKLPDRIEFVDSLPLTAVGKIDKKALRRRLASRL 540 (542)
T ss_pred hhcCcceeEEEEecCCC------CCHHHHHHHHHHcchhhhcCCcceeecccCCCcccccccHHHHHHHhhhhc
Confidence 99999999999988764 5788999999765 8999999999999999999999999999999887543
No 9
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=2e-70 Score=576.34 Aligned_cols=525 Identities=25% Similarity=0.288 Sum_probs=418.6
Q ss_pred CCCCCCChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcC
Q 008636 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSG 88 (558)
Q Consensus 9 ~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G 88 (558)
+|..+-++.++|++.++++|+++|+++.++.+||+||.+++.++|++|.++|+++||+|+++++|++++++++|||+++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~~~la~~~~G 81 (563)
T PLN02860 2 ANHSQAHICQCLTRLATLRGNAVVTISGNRRRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYLEWLLAVACAG 81 (563)
T ss_pred cchhhhHHHHHHHHHHHhcCCceEEecCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHhhcc
Confidence 46677899999999999999999999988999999999999999999999999999999999999999999999999999
Q ss_pred cEEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhh
Q 008636 89 AIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT 168 (558)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (558)
++++|+++.++.+++..+++++++++++++.+............ ......++......... ... ......
T Consensus 82 av~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~-----~~~---~~~~~~ 151 (563)
T PLN02860 82 GIVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQNDR--LPSLMWQVFLESPSSSV-----FIF---LNSFLT 151 (563)
T ss_pred EEEEeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhhcc--CCceeEEEEecCccccc-----ccc---hhhccc
Confidence 99999999999999999999999999999876533332221110 00111122222111000 000 000011
Q ss_pred HHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhhhHH
Q 008636 169 YENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248 (558)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~ 248 (558)
..++...............++++++++|||||||.||+|.++|+++..........+++.++|+++...|++|..++..+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~ 231 (563)
T PLN02860 152 TEMLKQRALGTTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA 231 (563)
T ss_pred cchhccCccccccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhcCCCCCCEEEEecCchhhccHHHH
Confidence 11111111011111122457899999999999999999999999998776666666788899999999999999999888
Q ss_pred HHHHHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc----cccCCCCceEEEEecCCCChhhhHHhhh-
Q 008636 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP----EAKQLDRPVRILTAGSPPPAPVLLRTES- 323 (558)
Q Consensus 249 ~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~----~~~~~~~l~~v~~~g~~l~~~~~~~~~~- 323 (558)
+.++..|+++++.+.+++..+++.++++++|++.++|+++..|++.. ....++++|.+++||+++++.+...+++
T Consensus 232 ~~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~ 311 (563)
T PLN02860 232 LAMLMVGACHVLLPKFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTWKVFPSVRKILNGGGSLSSRLLPDAKKL 311 (563)
T ss_pred HHHHHcCceEEecCCCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhccccccceeEEEeCCCcCCHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999998754 2245679999999999999999999985
Q ss_pred c-CCeeeecccCCCCCCcccccCCCC-CCCCC-----------ChhhhhhhcccCCceecccceeeEeCCCCCcccCCCC
Q 008636 324 L-GFIVSHGYGKTEIAGVNVSCAWKP-KWNKL-----------PARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDG 390 (558)
Q Consensus 324 ~-~~~v~~~YG~tE~g~~~~~~~~~~-~~~~~-----------~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~ 390 (558)
+ +.++++.||+||+++.+....... ..... ..........++|.|.+++ +++|++++ ++
T Consensus 312 ~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~-~v~i~~~~------~g- 383 (563)
T PLN02860 312 FPNAKLFSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHV-ELKIGLDE------SS- 383 (563)
T ss_pred cCCCceecCCCccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccCCc-EEEEecCC------CC-
Confidence 4 789999999999876544322111 00000 0000011123689999998 99999874 23
Q ss_pred CeeeEEEEecccccccccCCchhhcccc-cCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCc
Q 008636 391 QTRGEIVMRGGSLMLGYLKDPEATSKCM-KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMV 469 (558)
Q Consensus 391 ~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v 469 (558)
+.|||+++|+.++.|||++++.+...+ .+|||+|||+|+++++|.+++.||++|+|+.+|++|+|.+||+.|.++|+|
T Consensus 384 -~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V 462 (563)
T PLN02860 384 -RVGRILTRGPHVMLGYWGQNSETASVLSNDGWLDTGDIGWIDKAGNLWLIGRSNDRIKTGGENVYPEEVEAVLSQHPGV 462 (563)
T ss_pred -ceeEEEEecCcccccccCCccccchhccCCCeEEccceEEEcCCCCEEEeecccceeEECCEEccHHHHHHHHHhCCCc
Confidence 789999999999999999999888777 589999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEeeeCCCCCceeEEEEEecCCCCC---------CCCCCCHHHHHHHHHh-cCCCccccCeEEEe-cccCCCCCCc
Q 008636 470 NEAAVVGRPDPFWQEIPCAFVSLKTGTDS---------GGMMTTEKDIIQYCRA-RIPRYMVPKTVVFI-DELPKTATGK 538 (558)
Q Consensus 470 ~~~~v~~~~~~~~~~~~~~~v~~~~~~~~---------~~~~~~~~~l~~~~~~-~l~~~~~p~~i~~v-~~~P~t~~GK 538 (558)
.+++|++.+++..++.++++|++.++... .+.....+++.+++++ +|++|++|+.++++ ++||+|++||
T Consensus 463 ~~~~v~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~~~~~~~~lP~t~~GK 542 (563)
T PLN02860 463 ASVVVVGVPDSRLTEMVVACVRLRDGWIWSDNEKENAKKNLTLSSETLRHHCREKNLSRFKIPKLFVQWRKPFPLTTTGK 542 (563)
T ss_pred ceeEEEEEecCcCCceEEEEEEECCccccccccchhhcccccccHHHHHHHHhhCcccccccceEEEEEecCCCCCcccc
Confidence 99999999999889999999998765210 0011456789999987 59999999988765 6799999999
Q ss_pred chhHHHHHHHhhcc
Q 008636 539 VQKYVLGDIANSMS 552 (558)
Q Consensus 539 ~~r~~l~~~~~~~~ 552 (558)
++|++|++++.+..
T Consensus 543 i~r~~L~~~~~~~~ 556 (563)
T PLN02860 543 IRRDEVRREVLSHL 556 (563)
T ss_pred hhHHHHHHHHHHHH
Confidence 99999999986543
No 10
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=3.2e-70 Score=582.20 Aligned_cols=515 Identities=21% Similarity=0.268 Sum_probs=410.1
Q ss_pred hhHHHHHhh-cCCCCceEEEC------CccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCc
Q 008636 17 LGFIERAAT-ACDDCPSIIYN------DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGA 89 (558)
Q Consensus 17 ~~~l~~~a~-~~p~~~a~~~~------~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 89 (558)
.++|++++. .+|+++|+++. .+++||+||.+++.++|+.|++.|+++||+|+++++|++++++++|||+++|+
T Consensus 91 ~~~l~~~~~~~~~~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v~a~lA~~~~Ga 170 (666)
T PLN02654 91 YNCLDRNVEAGNGDKIAIYWEGNEPGFDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELPIAMLACARIGA 170 (666)
T ss_pred HHHHHHhhccCCCCCEEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC
Confidence 467777765 48999999874 26899999999999999999999999999999999999999999999999999
Q ss_pred EEEeccccCChHHHHHHHhhcCccEEEEeCcChH---------HHHHHhhcCCCCC-CCCcEEEEcCCccccCCCCCCCC
Q 008636 90 IFNTINTRLDARTISIILKHSESKLVFVDHLSSS---------LLLEVVSLFPPHS-KTPKLVLITDDKEISSSSSPPPR 159 (558)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~---------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 159 (558)
+++|+++.++.+++..+++.++++++|+++.... .+.+......... ....++.......... ....
T Consensus 171 v~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 247 (666)
T PLN02654 171 VHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYENQLAMKR---EDTK 247 (666)
T ss_pred EEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEEEecccccccc---cccc
Confidence 9999999999999999999999999999875421 1222222111000 0111121111110000 0000
Q ss_pred CCCCCchhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHH-HhcccccccCCCCEEEEecC
Q 008636 160 IPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIA-VDSLIDWVVPKQSVLLWTLP 238 (558)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~p 238 (558)
.... ....|.++...... ........++|+++|+|||||||.||||+++|.++.... ......++++++|++++..|
T Consensus 248 ~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 325 (666)
T PLN02654 248 WQEG-RDVWWQDVVPNYPT-KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPTDVYWCTAD 325 (666)
T ss_pred cccC-CcccHHHHhhcCCC-CCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhcCCCCCcEEEEcCC
Confidence 0000 01234444332211 111223567899999999999999999999999976433 33444567889999999999
Q ss_pred chhhhhh-hHHHHHHHhcceEEEecC----CCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc----cccCCCCceEEEEe
Q 008636 239 MFHNNGW-SFTWGAAVVGATNVCLRK----FDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP----EAKQLDRPVRILTA 309 (558)
Q Consensus 239 ~~~~~g~-~~~~~~l~~g~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~----~~~~~~~l~~v~~~ 309 (558)
++|+.|. ..++.+++.|+++++.+. +++..+++.|+++++|++.++|++++.|.+.. ....++++|.++++
T Consensus 326 ~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~Lr~i~~~ 405 (666)
T PLN02654 326 CGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVTRHSRKSLRVLGSV 405 (666)
T ss_pred chhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccccccCChhheeEEEEe
Confidence 9999987 457889999999999863 57999999999999999999999999998764 22457799999999
Q ss_pred cCCCChhhhHHhh-hcC---CeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcc
Q 008636 310 GSPPPAPVLLRTE-SLG---FIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLS 385 (558)
Q Consensus 310 g~~l~~~~~~~~~-~~~---~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~ 385 (558)
|++++++.++++. .+| +++.+.||+||+|+........ ......+++|.|.+++ +++|+|+ +|++
T Consensus 406 Ge~l~~~~~~~~~~~~g~~~~~i~~~yg~TE~g~~~~~~~~~---------~~~~~~gs~G~p~~g~-~v~i~d~-~g~~ 474 (666)
T PLN02654 406 GEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPG---------AWPQKPGSATFPFFGV-QPVIVDE-KGKE 474 (666)
T ss_pred cCCCCHHHHHHHHHHhCCCCCceeccccccccCCeeeccCCC---------CCCCCCCccCCCCCCc-eEEEECC-CCCC
Confidence 9999999999887 455 7899999999998765533210 0112356799999999 9999997 6777
Q ss_pred cCCCCCeeeEEEEec--ccccccccCCchhhcccc---cCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHH
Q 008636 386 VKRDGQTRGEIVMRG--GSLMLGYLKDPEATSKCM---KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIE 460 (558)
Q Consensus 386 ~~~~~~~~Gel~v~~--~~~~~gy~~~~~~~~~~~---~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE 460 (558)
++.+ +.|||++++ |+++.|||++++.+...+ .+|||+|||+|++|+||.++++||+||+||++|++|+|.+||
T Consensus 475 ~~~~--~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGD~~~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE 552 (666)
T PLN02654 475 IEGE--CSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYYWLTGRVDDVINVSGHRIGTAEVE 552 (666)
T ss_pred CCCC--CceEEEEcCCCchhhhhhcCChHHHHHhhhhcCCCEEEeCceEEECCCCcEEEeeeccCeEEeCCEEECHHHHH
Confidence 7665 679999999 789999999998776654 279999999999999999999999999999999999999999
Q ss_pred HHHhcCCCcceeEEEeeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcch
Q 008636 461 SVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540 (558)
Q Consensus 461 ~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~ 540 (558)
++|.+||+|.+++|++.+++..|+.++++|+++++.... ....++|+++++++|++++.|+.|+++++||+|++||++
T Consensus 553 ~~l~~~p~V~eaaVvg~~d~~~ge~~~a~Vvl~~~~~~~--~~l~~~l~~~~~~~L~~~~~P~~i~~v~~lP~T~sGKi~ 630 (666)
T PLN02654 553 SALVSHPQCAEAAVVGIEHEVKGQGIYAFVTLVEGVPYS--EELRKSLILTVRNQIGAFAAPDKIHWAPGLPKTRSGKIM 630 (666)
T ss_pred HHHHhCCCeeeEEEEeeEcCCCCeEEEEEEEECCCCCCC--HHHHHHHHHHHHHhCCCCcCCCEEEECCCCCCCCCcCch
Confidence 999999999999999999999999999999998764310 022357889999999999999999999999999999999
Q ss_pred hHHHHHHHhhc
Q 008636 541 KYVLGDIANSM 551 (558)
Q Consensus 541 r~~l~~~~~~~ 551 (558)
|+.|++++.+.
T Consensus 631 r~~l~~~~~~~ 641 (666)
T PLN02654 631 RRILRKIASRQ 641 (666)
T ss_pred HHHHHHHHcCC
Confidence 99999998763
No 11
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=5.6e-70 Score=579.17 Aligned_cols=516 Identities=21% Similarity=0.277 Sum_probs=415.3
Q ss_pred hhHHHHHhhcCCCCceEEEC------CccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcE
Q 008636 17 LGFIERAATACDDCPSIIYN------DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAI 90 (558)
Q Consensus 17 ~~~l~~~a~~~p~~~a~~~~------~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (558)
.++|++++..+|+++|+++. .+++||+||.+++.++|++|+++|+++||+|+++++|++++++++|||+++|++
T Consensus 55 ~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v~~~lA~~~~Gav 134 (628)
T TIGR02316 55 HNALDRHLDERGEQLALVTVSSETGQERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAVFAMLACARIGAI 134 (628)
T ss_pred HHHHHHHhCcCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCCE
Confidence 46788888889999999972 368999999999999999999999999999999999999999999999999999
Q ss_pred EEeccccCChHHHHHHHhhcCccEEEEeCcC---------hHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCC
Q 008636 91 FNTINTRLDARTISIILKHSESKLVFVDHLS---------SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIP 161 (558)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (558)
++|+++.++.+++..+++.++++++|+++.. ...+.++..... .....++.++....... ..
T Consensus 135 ~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~vi~~~~~~~~~~-------~~ 205 (628)
T TIGR02316 135 HSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQ--HPPPHVLLVDRGLAPMR-------LI 205 (628)
T ss_pred EEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcC--CCCCEEEEEeCCCCCcC-------cc
Confidence 9999999999999999999999999997643 222333222211 11344555543211000 00
Q ss_pred CCCchhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHH-hcccccccCCCCEEEEecCch
Q 008636 162 PADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAV-DSLIDWVVPKQSVLLWTLPMF 240 (558)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~ 240 (558)
.. ....+.++...............++++++|+|||||||.||||+++|.++..... .....++++++|++++..|++
T Consensus 206 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 284 (628)
T TIGR02316 206 PG-RDVDYAALRTQHEDAQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFGIRAGQVMFSASDVG 284 (628)
T ss_pred cC-ccccHHHHhhccccCCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCcEEEEcCCCC
Confidence 00 0134455444322111112224678999999999999999999999999754433 334456788999999999999
Q ss_pred hhhhh-hHHHHHHHhcceEEEecC----CCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc----cccCCCCceEEEEecC
Q 008636 241 HNNGW-SFTWGAAVVGATNVCLRK----FDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP----EAKQLDRPVRILTAGS 311 (558)
Q Consensus 241 ~~~g~-~~~~~~l~~g~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~----~~~~~~~l~~v~~~g~ 311 (558)
|..++ ..++.+++.|+++++.+. +++..+++.++++++|+++++|++++.|.+.. ....++++|.+++||+
T Consensus 285 ~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gGe 364 (628)
T TIGR02316 285 WVVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHDLSSLHWLFLAGE 364 (628)
T ss_pred eeehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecC
Confidence 99886 568889999999999863 47899999999999999999999999998754 2346789999999999
Q ss_pred CCChhhhHHhh-hcCCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCC
Q 008636 312 PPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDG 390 (558)
Q Consensus 312 ~l~~~~~~~~~-~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~ 390 (558)
++++++.+++. .++..+++.||+||++..+........ ......+++|.|.+++ +++|+|+++|++++.+
T Consensus 365 ~l~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~-------~~~~~~gs~G~p~~g~-~v~i~d~~~g~~~~~g- 435 (628)
T TIGR02316 365 PLDEPTAHWITDGLGKPVIDNYWQTETGWPVLAIMPGLD-------LKPVKLGSPGLPMYGY-HLRVLDEATGRPCGPN- 435 (628)
T ss_pred CCCHHHHHHHHHHhCCCEEecccccccCceeecCCCCCC-------cCCCCCCCcccCcCCc-eEEEEECCCCCCCCCC-
Confidence 99999998887 468999999999999854433221100 0112346789999998 9999998788999877
Q ss_pred CeeeEEEEecc---cccccccCCchhhcccc----cCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHH
Q 008636 391 QTRGEIVMRGG---SLMLGYLKDPEATSKCM----KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVL 463 (558)
Q Consensus 391 ~~~Gel~v~~~---~~~~gy~~~~~~~~~~~----~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l 463 (558)
+.|||+++|| +.+.|||++++.+...+ .++||+|||+|++|+||.+++.||+||+||++|.+|+|.+||++|
T Consensus 436 -~~Gel~v~gp~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~g~~d~dG~l~i~GR~dd~ik~~G~rv~~~eIE~~l 514 (628)
T TIGR02316 436 -EKGVLTVVPPLPPGCLSTVWGDDARFLKTYWSHFKRPLYSSFDWGIRDEDGYTFILGRTDDVINVAGHRLGTREIEESV 514 (628)
T ss_pred -CcEEEEEecCCCccccccccCChHHHHHhhhhcCCCCEEECCceEEEcCCCcEEEEEcCcceEEeCCEEeCHHHHHHHH
Confidence 7899999998 57899999987765543 577999999999999999999999999999999999999999999
Q ss_pred hcCCCcceeEEEeeeCCCCCceeEEEEEecCCCCCCC---CCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcch
Q 008636 464 YSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGG---MMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540 (558)
Q Consensus 464 ~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~---~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~ 540 (558)
.++|+|.+++|++++++..|+.++++|++.++....+ .....++|+++++++|++|++|+.++++++||+|++||++
T Consensus 515 ~~~p~V~ea~Vvg~~d~~~g~~~~~~vv~~~~~~~~~~~~~~~~~~~i~~~~~~~L~~~~~P~~v~~v~~lP~t~sGKi~ 594 (628)
T TIGR02316 515 SSHPSVAEVAVVGVHDELKGQVAVVFAILKESDSAGDAHDPHAVETGMMDCVVRQLGAVARPARVYFVAALPKTRSGKLL 594 (628)
T ss_pred HhCCCcceEEEEeeecCCCCeEEEEEEEEcCCcccccccchHHHHHHHHHHHHHhcCCCcCCCEEEEcCCCCCCCchHHH
Confidence 9999999999999999999999999999876542110 0124578999999999999999999999999999999999
Q ss_pred hHHHHHHHhhcc
Q 008636 541 KYVLGDIANSMS 552 (558)
Q Consensus 541 r~~l~~~~~~~~ 552 (558)
|+.|++++.+..
T Consensus 595 r~~L~~~~~~~~ 606 (628)
T TIGR02316 595 RRSIQALAEGRD 606 (628)
T ss_pred HHHHHHHHcCCC
Confidence 999999987543
No 12
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=2.1e-69 Score=574.13 Aligned_cols=517 Identities=27% Similarity=0.389 Sum_probs=419.4
Q ss_pred CCCCChhhHHHHHhhcCCCCceEEE--------CCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHH
Q 008636 11 SCPLTPLGFIERAATACDDCPSIIY--------NDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHF 82 (558)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~--------~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~l 82 (558)
..+.|+.++|+++++++|+++|+++ ..+++||+||.+++.++|++|+++|+++||+|+++++|++++++++|
T Consensus 22 ~~~~t~~~~l~~~a~~~p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~~~~l 101 (632)
T PRK07529 22 DLPASTYELLSRAAARHPDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETHFALW 101 (632)
T ss_pred cCCCCHHHHHHHHHHHCCCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 5577999999999999999999986 24789999999999999999999999999999999999999999999
Q ss_pred HHhhcCcEEEeccccCChHHHHHHHhhcCccEEEEeCcCh-----HHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCC
Q 008636 83 AVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS-----SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPP 157 (558)
Q Consensus 83 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (558)
||+++| +++|+++.++.+++.++++.++++++|+++... ..+........ ....++.++............
T Consensus 102 A~~~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~ 177 (632)
T PRK07529 102 GGEAAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLAALP---ELRTVVEVDLARYLPGPKRLA 177 (632)
T ss_pred HHHHhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHhcCC---cceeEEEecCccccccccccc
Confidence 999999 569999999999999999999999999986542 23333322222 233444443221110000000
Q ss_pred C---CCCCCCchhhHHHhhcCCCCC-CCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEE
Q 008636 158 P---RIPPADFVDTYENMLAKGDPQ-FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVL 233 (558)
Q Consensus 158 ~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~ 233 (558)
. .......+..+.+.+...... .....+..++++++++|||||||.||+|.++|+++..........+.+.+++++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~d~~ 257 (632)
T PRK07529 178 VPLIRRKAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALLLGLGPGDTV 257 (632)
T ss_pred ccccccccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHhcCCCCCCEE
Confidence 0 000111133455544443222 122223467899999999999999999999999998777666666778899999
Q ss_pred EEecCchhhhhh-hHHHHHHHhcceEEEecCC---C---HHHHHHHHHHhCCcEEEehHHHHHHHhcCcc-ccCCCCceE
Q 008636 234 LWTLPMFHNNGW-SFTWGAAVVGATNVCLRKF---D---APTVFALIRKHGVTHMCGAPIVLNLLSSSPE-AKQLDRPVR 305 (558)
Q Consensus 234 ~~~~p~~~~~g~-~~~~~~l~~g~~~~~~~~~---~---~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~-~~~~~~l~~ 305 (558)
++.+|++|..++ ..++.++..|+++++.++. + ...+++.++++++|++.++|+++..|++... ...++++|.
T Consensus 258 l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~slr~ 337 (632)
T PRK07529 258 FCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVPVDGHDISSLRY 337 (632)
T ss_pred EEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcccCCCccceEE
Confidence 999999999887 4678889999999987631 1 3678999999999999999999999988763 346789999
Q ss_pred EEEecCCCChhhhHHhh-hcCCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEe--CCCC
Q 008636 306 ILTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIV--DPET 382 (558)
Q Consensus 306 v~~~g~~l~~~~~~~~~-~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~--d~~~ 382 (558)
+++||+++++++.++++ .+++++++.||+||++.++..+... .....+++|.+.++. .++|+ |+ +
T Consensus 338 v~~gg~~l~~~l~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~----------~~~~~~svG~~~p~~-~v~i~~~d~-~ 405 (632)
T PRK07529 338 ALCGAAPLPVEVFRRFEAATGVRIVEGYGLTEATCVSSVNPPD----------GERRIGSVGLRLPYQ-RVRVVILDD-A 405 (632)
T ss_pred EEEcCCCCCHHHHHHHHHHhCCcEeeeecccccCcccccCCcc----------ccccCCCcccccCCc-eEEEEEcCC-C
Confidence 99999999999999998 4699999999999998766543211 112346899999988 88885 54 4
Q ss_pred C---cccCCCCCeeeEEEEecccccccccCCchhhcccccCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHH
Q 008636 383 G---LSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEI 459 (558)
Q Consensus 383 ~---~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~i 459 (558)
+ .+++.+ +.|||+|+|++++.||++++......+.+|||+|||+|++++||.+++.||++|+|+.+|.+|+|.+|
T Consensus 406 g~~~~~~~~g--~~Gel~v~gp~v~~GY~~~~~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~i~p~eI 483 (632)
T PRK07529 406 GRYLRDCAVD--EVGVLCIAGPNVFSGYLEAAHNKGLWLEDGWLNTGDLGRIDADGYFWLTGRAKDLIIRGGHNIDPAAI 483 (632)
T ss_pred CcccccCCCC--CceEEEEECCCccccccCCccccccccCCCceEcCcEEEEcCCceEEEEecccCEEEeCCEEECHHHH
Confidence 5 667777 78999999999999999876544333368999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCcceeEEEeeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCC-CccccCeEEEecccCCCCCCc
Q 008636 460 ESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIP-RYMVPKTVVFIDELPKTATGK 538 (558)
Q Consensus 460 E~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~-~~~~p~~i~~v~~~P~t~~GK 538 (558)
|+.|.++|+|.+++|++.+++..|+.++++|++.++.. .+.++++++++++++ .+++|+.|+++++||+|++||
T Consensus 484 E~~l~~~p~V~~a~vvg~~d~~~ge~~~a~v~l~~~~~-----~~~~~l~~~~~~~l~~~~~~P~~i~~v~~lP~t~~GK 558 (632)
T PRK07529 484 EEALLRHPAVALAAAVGRPDAHAGELPVAYVQLKPGAS-----ATEAELLAFARDHIAERAAVPKHVRILDALPKTAVGK 558 (632)
T ss_pred HHHHHhCCCeeEEEEEeccCCCCCceeEEEEEEcCCCC-----CCHHHHHHHHHHhcchhccCCcEEEEecCCCCCCCCc
Confidence 99999999999999999999999999999999988765 678899999999986 478999999999999999999
Q ss_pred chhHHHHHHHhh
Q 008636 539 VQKYVLGDIANS 550 (558)
Q Consensus 539 ~~r~~l~~~~~~ 550 (558)
++|.+|++.+..
T Consensus 559 i~r~~Lr~~~~~ 570 (632)
T PRK07529 559 IFKPALRRDAIR 570 (632)
T ss_pred ccHHHHHHHHHH
Confidence 999999998765
No 13
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=2.7e-69 Score=574.99 Aligned_cols=510 Identities=24% Similarity=0.335 Sum_probs=415.0
Q ss_pred hhhHHHHHhhcCCCCceEEECC------ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCc
Q 008636 16 PLGFIERAATACDDCPSIIYND------TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGA 89 (558)
Q Consensus 16 l~~~l~~~a~~~p~~~a~~~~~------~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 89 (558)
..++|+++++.+|+++|+++.+ +.+||+||.+++.++|+.|+++|+++||+|+++++|++++++++|||+++|+
T Consensus 59 ~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Ga 138 (625)
T TIGR02188 59 SYNCVDRHLEARPDKVAIIWEGDEPGEVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAAIAMLACARIGA 138 (625)
T ss_pred HHHHHHHhhccCCCCeEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCC
Confidence 3566778888899999998743 4899999999999999999999999999999999999999999999999999
Q ss_pred EEEeccccCChHHHHHHHhhcCccEEEEeCcCh---------HHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCC
Q 008636 90 IFNTINTRLDARTISIILKHSESKLVFVDHLSS---------SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRI 160 (558)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (558)
+++++++.++.+++..+++.++++++|+++... ..+.+.....+. ....++.+........ ..
T Consensus 139 v~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~---~~--- 210 (625)
T TIGR02188 139 IHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPV--SVEHVLVVRRTGNPVP---WV--- 210 (625)
T ss_pred EEeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCC--CccEEEEEcCCCCCcC---cc---
Confidence 999999999999999999999999999986532 233333332210 1233444432111000 00
Q ss_pred CCCCchhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHh-cccccccCCCCEEEEecCc
Q 008636 161 PPADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVD-SLIDWVVPKQSVLLWTLPM 239 (558)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~ 239 (558)
......+.++....... ....+..++++++|+|||||||.||+|+++|.++...... ....+++.++|++++..|+
T Consensus 211 --~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 287 (625)
T TIGR02188 211 --EGRDVWWHDLMAKASAY-CEPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFDIKDGDIFWCTADV 287 (625)
T ss_pred --ccccccHHHHHhhcCCC-CCceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccCCCCCcEEEECCCc
Confidence 00013344544432221 1223456789999999999999999999999998655433 3335678889999999999
Q ss_pred hhhhhh-hHHHHHHHhcceEEEecC----CCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc----cccCCCCceEEEEec
Q 008636 240 FHNNGW-SFTWGAAVVGATNVCLRK----FDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP----EAKQLDRPVRILTAG 310 (558)
Q Consensus 240 ~~~~g~-~~~~~~l~~g~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~----~~~~~~~l~~v~~~g 310 (558)
+|..+. ..++.++..|+++++.+. +++..+++.++++++|++.++|++++.|.+.. ....++++|.++++|
T Consensus 288 ~~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~G 367 (625)
T TIGR02188 288 GWITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWVKKHDLSSLRLLGSVG 367 (625)
T ss_pred hhhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEec
Confidence 998886 458889999999998763 47999999999999999999999999998764 234578999999999
Q ss_pred CCCChhhhHHhhh-c---CCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCccc
Q 008636 311 SPPPAPVLLRTES-L---GFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSV 386 (558)
Q Consensus 311 ~~l~~~~~~~~~~-~---~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~ 386 (558)
+++++++++++.+ + ++++++.||+||+|+.++.+... ......+++|.|.+++ +++|+|+ +|+.+
T Consensus 368 ~~l~~~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~---------~~~~~~~~~G~p~~g~-~~~i~d~-~g~~~ 436 (625)
T TIGR02188 368 EPINPEAWMWYYKVVGKERCPIVDTWWQTETGGIMITPLPG---------ATPTKPGSATLPFFGI-EPAVVDE-EGNPV 436 (625)
T ss_pred CCCCHHHHHHHHHHcCCCCCceEecccccccCCceeecCCC---------CCCcCCCcccCCcCCc-eEEEECC-CCCCC
Confidence 9999999988874 3 37899999999998876543211 0112346799999998 9999996 78888
Q ss_pred C-CCCCeeeEEEEec--ccccccccCCchhhcccc---cCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHH
Q 008636 387 K-RDGQTRGEIVMRG--GSLMLGYLKDPEATSKCM---KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIE 460 (558)
Q Consensus 387 ~-~~~~~~Gel~v~~--~~~~~gy~~~~~~~~~~~---~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE 460 (558)
+ .+ +.|||++++ |+++.|||++++.+...+ .+|||+|||+|++|+||.+++.||+||+|+++|++|+|.+||
T Consensus 437 ~~~g--~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE 514 (625)
T TIGR02188 437 EGPG--EGGYLVIKQPWPGMLRTIYGDHERFVDTYFSPFPGYYFTGDGARRDKDGYIWITGRVDDVINVSGHRLGTAEIE 514 (625)
T ss_pred CCCC--CeEEEEEccCCCcccccccCChHHHHHHHhccCCCEEECCceEEEcCCCcEEEEecccCEEEeCCEEECHHHHH
Confidence 7 66 789999999 589999999998766554 378999999999999999999999999999999999999999
Q ss_pred HHHhcCCCcceeEEEeeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcch
Q 008636 461 SVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540 (558)
Q Consensus 461 ~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~ 540 (558)
++|.++|+|.+++|++.+++..|+.++++|++.++.... ....++|+++++++|++++.|+.|+++++||+|++||++
T Consensus 515 ~~l~~~p~V~e~~vvg~~~~~~g~~~~a~vv~~~~~~~~--~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~sGKi~ 592 (625)
T TIGR02188 515 SALVSHPAVAEAAVVGIPDDIKGQAIYAFVTLKDGYEPD--DELRKELRKHVRKEIGPIAKPDKIRFVPGLPKTRSGKIM 592 (625)
T ss_pred HHHHhCCCcceEEEEeeEcCCCCeEEEEEEEeCCCCCCC--HHHHHHHHHHHHhhcCCCccCcEEEECCCCCCCCCccch
Confidence 999999999999999999999999999999988765411 013478999999999999999999999999999999999
Q ss_pred hHHHHHHHhhc
Q 008636 541 KYVLGDIANSM 551 (558)
Q Consensus 541 r~~l~~~~~~~ 551 (558)
|+.|++++.+.
T Consensus 593 r~~l~~~~~~~ 603 (625)
T TIGR02188 593 RRLLRKIAAGE 603 (625)
T ss_pred HHHHHHHHcCC
Confidence 99999998764
No 14
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=1.8e-68 Score=560.41 Aligned_cols=503 Identities=28% Similarity=0.436 Sum_probs=423.2
Q ss_pred CCCCCCChhhHHHHHhhcCCCCceEEECC------ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHH
Q 008636 9 ANSCPLTPLGFIERAATACDDCPSIIYND------TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHF 82 (558)
Q Consensus 9 ~~~~~~tl~~~l~~~a~~~p~~~a~~~~~------~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~l 82 (558)
--+...++.++|++.++.+|+++|+++.+ +.+||+||.+++.++|++|.+.|+++||+|+++++|++++++++|
T Consensus 19 ~~~~~~~l~~~l~~~a~~~p~~~A~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~~~~~l 98 (547)
T PRK13295 19 GHWHDRTINDDLDACVASCPDKTAVTAVRLGTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEFTVLYL 98 (547)
T ss_pred CCCcCCCHHHHHHHHHHHCCCceEEEecCCCccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHH
Confidence 34556799999999999999999999865 899999999999999999999999999999999999999999999
Q ss_pred HHhhcCcEEEeccccCChHHHHHHHhhcCccEEEEeCcCh-----HHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCC
Q 008636 83 AVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS-----SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPP 157 (558)
Q Consensus 83 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (558)
||+++|++++|++|..+.+++..+++.++++++|++++.. ..+.+...... ....++.+....
T Consensus 99 a~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~--------- 166 (547)
T PRK13295 99 ACSRIGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARRLRPELP---ALRHVVVVGGDG--------- 166 (547)
T ss_pred HHHhcCcEEeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHHHhhhCC---CcceEEEecCCC---------
Confidence 9999999999999999999999999999999999987541 22222222111 123333333211
Q ss_pred CCCCCCCchhhHHHhhcCC-----CC--CCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCC
Q 008636 158 PRIPPADFVDTYENMLAKG-----DP--QFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQ 230 (558)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~ 230 (558)
...+.++.... .. ..........+++++++|||||||.||+|.++|+++..........+++.++
T Consensus 167 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~ 238 (547)
T PRK13295 167 --------ADSFEALLITPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERLGLGAD 238 (547)
T ss_pred --------ccCHHHHhhCCccccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHhCCCCC
Confidence 11222222111 00 0011122456899999999999999999999999998877776677788899
Q ss_pred CEEEEecCchhhhhh-hHHHHHHHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc--cccCCCCceEEE
Q 008636 231 SVLLWTLPMFHNNGW-SFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRPVRIL 307 (558)
Q Consensus 231 ~~~~~~~p~~~~~g~-~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~--~~~~~~~l~~v~ 307 (558)
+++++..|++|..++ ..++.++..|+++++.+..++..+++.++++++|++.++|.++..+.... ....+++++.++
T Consensus 239 ~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~ 318 (547)
T PRK13295 239 DVILMASPMAHQTGFMYGLMMPVMLGATAVLQDIWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKESGRPVSSLRTFL 318 (547)
T ss_pred CeEEEecCchhhhhHHHHHHHHHHcCCeEEeCCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccccCCCcccceEEE
Confidence 999999999999886 55788999999999988889999999999999999999999999998765 335577899999
Q ss_pred EecCCCChhhhHHhh-hcCCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCccc
Q 008636 308 TAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSV 386 (558)
Q Consensus 308 ~~g~~l~~~~~~~~~-~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~ 386 (558)
+||+++++++.++++ .+++++++.||+||++.+++.+.... ......++|.|.+++ .++|+|+ ++.++
T Consensus 319 ~~G~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~---------~~~~~~~~G~~~~~~-~v~i~d~-~~~~~ 387 (547)
T PRK13295 319 CAGAPIPGALVERARAALGAKIVSAWGMTENGAVTLTKLDDP---------DERASTTDGCPLPGV-EVRVVDA-DGAPL 387 (547)
T ss_pred EecCCCCHHHHHHHHHHhCCCeEEeccCCCCCCeeeccCCCc---------chhccCccccccCCc-EEEEECC-CCCCC
Confidence 999999999999988 46999999999999987665543111 112235689999998 9999997 67788
Q ss_pred CCCCCeeeEEEEecccccccccCCchhhcccccCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcC
Q 008636 387 KRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSH 466 (558)
Q Consensus 387 ~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~ 466 (558)
+.| +.|||+++|+.++.||+++++.+... .+|||+|||+|+++++|.+++.||.+|+|+.+|++|+|.+||+.|.++
T Consensus 388 ~~g--~~Gel~v~g~~~~~gY~~~~~~t~~~-~~g~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~~IE~~l~~~ 464 (547)
T PRK13295 388 PAG--QIGRLQVRGCSNFGGYLKRPQLNGTD-ADGWFDTGDLARIDADGYIRISGRSKDVIIRGGENIPVVEIEALLYRH 464 (547)
T ss_pred CCC--CCCeEEEEcCcccccccCCccccccC-CCCCeecceEEEEcCCceEEEEeccCCeEEECCEEECHHHHHHHHHhC
Confidence 877 78999999999999999999887666 588999999999999999999999999999999999999999999999
Q ss_pred CCcceeEEEeeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHh-cCCCccccCeEEEecccCCCCCCcchhHHHH
Q 008636 467 PMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRA-RIPRYMVPKTVVFIDELPKTATGKVQKYVLG 545 (558)
Q Consensus 467 ~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~-~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~ 545 (558)
++|.+++|++.+++..++.+++++++.++.. ...+++.+++.+ .++++++|+.++++++||+|.+||++|.+|+
T Consensus 465 ~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~-----~~~~~l~~~~~~~~l~~~~~P~~i~~v~~lP~t~sgK~~r~~L~ 539 (547)
T PRK13295 465 PAIAQVAIVAYPDERLGERACAFVVPRPGQS-----LDFEEMVEFLKAQKVAKQYIPERLVVRDALPRTPSGKIQKFRLR 539 (547)
T ss_pred CCeeeEEEEeeecCCCCcEEEEEEEeCCCCC-----CCHHHHHHHHHhccCccccCCcEEEEeccCCCCCCccccHHHHH
Confidence 9999999999999988899999999876643 567889999986 6999999999999999999999999999999
Q ss_pred HHHhh
Q 008636 546 DIANS 550 (558)
Q Consensus 546 ~~~~~ 550 (558)
+++++
T Consensus 540 ~~~~~ 544 (547)
T PRK13295 540 EMLRG 544 (547)
T ss_pred HHHhc
Confidence 98865
No 15
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.5e-69 Score=558.63 Aligned_cols=489 Identities=28% Similarity=0.440 Sum_probs=420.3
Q ss_pred ChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEe
Q 008636 15 TPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSS-FGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNT 93 (558)
Q Consensus 15 tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~-~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 93 (558)
.+.+.|+++|+.+|+++|+++.++.+||+||.+++.++|.+|++ .|+++|++|+++++|++++++++|||+++|++++|
T Consensus 3 ~~~~~~~~~a~~~p~~~a~~~~~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~ 82 (496)
T PRK06839 3 GIAYWIEKRAYLHPDRIAIITEEEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKVECIAVP 82 (496)
T ss_pred cHHHHHHHHHHHCCCCeEEEECCceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEe
Confidence 47789999999999999999999999999999999999999985 79999999999999999999999999999999999
Q ss_pred ccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhHHHhh
Q 008636 94 INTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENML 173 (558)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (558)
+++..+.+++..+++.+++++++++++....+.+...... ...++.+.+ +.++.
T Consensus 83 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~----~~~~~~~~~----------------------~~~~~ 136 (496)
T PRK06839 83 LNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKVSY----VQRVISITS----------------------LKEIE 136 (496)
T ss_pred cCcccCHHHHHHHHHhcCceEEEEcHHHHHHHHHhhhccC----cceEEEecc----------------------hHhhh
Confidence 9999999999999999999999998776555444322211 122222221 11111
Q ss_pred cCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhhh-HHHHHH
Q 008636 174 AKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWS-FTWGAA 252 (558)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~-~~~~~l 252 (558)
..... ...+...+++++++|||||||.||+|.++|+++..........+++..+++++..+|++|.+|+. .++.++
T Consensus 137 ~~~~~---~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l 213 (496)
T PRK06839 137 DRKID---NFVEKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTL 213 (496)
T ss_pred ccCCC---CCCCCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHcCCCCCCeEEEeeCCcchhhHHHHHHHHH
Confidence 11111 11234567999999999999999999999999876666555666788999999999999999884 457788
Q ss_pred HhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc--cccCCCCceEEEEecCCCChhhhHHhhhcCCeeee
Q 008636 253 VVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSH 330 (558)
Q Consensus 253 ~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~--~~~~~~~l~~v~~~g~~l~~~~~~~~~~~~~~v~~ 330 (558)
..|+++++.+.++++.+++.++++++|++.++|.+++.+++.. ....++++|.+++||+++++.+.+.+++.++++.+
T Consensus 214 ~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~g~~~~~ 293 (496)
T PRK06839 214 FAGGVIIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETTNLQSVRWFYNGGAPCPEELMREFIDRGFLFGQ 293 (496)
T ss_pred hcCcEEEEccCCCHHHHHHHHHhhCCeEEEehHHHHHHHHhCcccccCCCcccceEEECCCCCCHHHHHHHHHhCCeeEe
Confidence 8999999888899999999999999999999999999998875 33457799999999999999999999877999999
Q ss_pred cccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecccccccccCC
Q 008636 331 GYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKD 410 (558)
Q Consensus 331 ~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~ 410 (558)
.||+||++.++..+... ......+++|.|.++. .++|+|+ ++..++.| +.|||+++|+.++.||+++
T Consensus 294 ~YG~tE~~~~~~~~~~~---------~~~~~~~~~G~p~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~gy~~~ 360 (496)
T PRK06839 294 GFGMTETSPTVFMLSEE---------DARRKVGSIGKPVLFC-DYELIDE-NKNKVEVG--EVGELLIRGPNVMKEYWNR 360 (496)
T ss_pred eccCCCCCcceEecccc---------cccccCCCCcccCCCc-eEEEECC-CcCCCCCC--CceEEEEECCCcchhhcCC
Confidence 99999998765443211 1112346789999998 9999998 55667777 7899999999999999999
Q ss_pred chhhcccccCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCCCCCceeEEEE
Q 008636 411 PEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFV 490 (558)
Q Consensus 411 ~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v 490 (558)
++.+...+.+|||+|||+++++++|.+++.||.+|+|+.+|.+|+|.+||+.|.++|+|.+++|++.+++..++.+++++
T Consensus 361 ~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v 440 (496)
T PRK06839 361 PDATEETIQDGWLCTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAVVGRQHVKWGEIPIAFI 440 (496)
T ss_pred hHHHHHHHcCCCeeecceEEEcCCCcEEEeccccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeccccccCceEEEEE
Confidence 99988888899999999999999999999999999999999999999999999999999999999999999899999999
Q ss_pred EecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHhh
Q 008636 491 SLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANS 550 (558)
Q Consensus 491 ~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~ 550 (558)
+++++.. ...+++++++++.|+++++|..+++++++|+|.+||++|.+|+++.++
T Consensus 441 ~~~~~~~-----~~~~~l~~~~~~~l~~~~~P~~~~~v~~~P~t~~GKi~r~~l~~~~~~ 495 (496)
T PRK06839 441 VKKSSSV-----LIEKDVIEHCRLFLAKYKIPKEIVFLKELPKNATGKIQKAQLVNQLKS 495 (496)
T ss_pred EECCCCC-----CCHHHHHHHHHhhCcCCCCCcEEEEeccCCCCccccccHHHHHHHhhc
Confidence 9887654 677899999999999999999999999999999999999999998765
No 16
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1e-68 Score=560.13 Aligned_cols=492 Identities=27% Similarity=0.341 Sum_probs=416.0
Q ss_pred CCCCChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcE
Q 008636 11 SCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAI 90 (558)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (558)
..++++.++|.++++++|+++|+++.++.+||+||.+++.++|.+|.++|+++|++|+++++|++++++++|||+++|++
T Consensus 40 ~~~~~~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 119 (537)
T PRK13382 40 REGMGPTSGFAIAAQRCPDRPGLIDELGTLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRGFVEALLAANRIGAD 119 (537)
T ss_pred hhcCCHHHHHHHHHHhCCCCeEEEeCCCeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHHHHHHHHHHHHcCcE
Confidence 34578999999999999999999998899999999999999999999999999999999999999999999999999999
Q ss_pred EEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhHH
Q 008636 91 FNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYE 170 (558)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (558)
++|+++.++.+++.++++.++++++|++.+....+........ ....++....... ...++
T Consensus 120 ~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~----------------~~~~~ 180 (537)
T PRK13382 120 ILLLNTSFAGPALAEVVTREGVDTVIYDEEFSATVDRALADCP---QATRIVAWTDEDH----------------DLTVE 180 (537)
T ss_pred EEecCcccCHHHHHHHHHhcCCCEEEEchhhHHHHHHHHhhcc---ccceEEEecCCcc----------------cccHH
Confidence 9999999999999999999999999999876665544332211 1112222211100 12233
Q ss_pred HhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhhhHHHH
Q 008636 171 NMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250 (558)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~ 250 (558)
.+....... . ....+++.++++|||||||.||+|.++|+++..........+.+..+++++...|++|..++..++.
T Consensus 181 ~~~~~~~~~-~--~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~ 257 (537)
T PRK13382 181 VLIAAHAGQ-R--PEPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRTPWRAEEPTVIVAPMFHAWGFSQLVL 257 (537)
T ss_pred HHhhccCcC-C--CCCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhhCCCCCCeEEEecChHhhhHHHHHHH
Confidence 333221111 1 1134678999999999999999999999888776666666667788999999999999999988889
Q ss_pred HHHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCcc----ccCCCCceEEEEecCCCChhhhHHhh-hcC
Q 008636 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE----AKQLDRPVRILTAGSPPPAPVLLRTE-SLG 325 (558)
Q Consensus 251 ~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~----~~~~~~l~~v~~~g~~l~~~~~~~~~-~~~ 325 (558)
++..|+++++...++++.+++.++++++|++.++|++++.|++... ...++++|.+++||+++++++++.+. .++
T Consensus 258 ~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~ 337 (537)
T PRK13382 258 AASLACTIVTRRRFDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEVRNRYSGRSLRFAAASGSRMRPDVVIAFMDQFG 337 (537)
T ss_pred HHhcCcEEEECCCcCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchhcccCCccceeEEEEcCCCCCHHHHHHHHHHcC
Confidence 9999999999888999999999999999999999999999987642 22345899999999999999999988 468
Q ss_pred CeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecccccc
Q 008636 326 FIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLML 405 (558)
Q Consensus 326 ~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~ 405 (558)
.++++.||+||++.++..+.. ......+++|.|.+++ .++|+|+ ++++++.| +.|||+++|++++.
T Consensus 338 ~~i~~~YG~TE~~~~~~~~~~----------~~~~~~~~vG~p~~~~-~~~i~d~-~~~~~~~g--~~GEl~v~g~~~~~ 403 (537)
T PRK13382 338 DVIYNNYNATEAGMIATATPA----------DLRAAPDTAGRPAEGT-EIRILDQ-DFREVPTG--EVGTIFVRNDTQFD 403 (537)
T ss_pred CcEEecccccccCcceecChh----------HhccCCCCccccCcCc-EEEEECC-CCCCCCCC--CeeEEEEEcCCccc
Confidence 899999999999876654321 1112346899999998 9999998 67888877 78999999999999
Q ss_pred cccCCchhhcccccCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCCCCCce
Q 008636 406 GYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEI 485 (558)
Q Consensus 406 gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~ 485 (558)
||+ ++.+. .+.+|||+|||+++++++|++++.||+||+||.+|++|+|.+||+.|.++|+|.+++|++.+++..|+.
T Consensus 404 gY~--~~~~~-~~~~g~~~TGDl~~~~~~g~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~ 480 (537)
T PRK13382 404 GYT--SGSTK-DFHDGFMASGDVGYLDENGRLFVVGRDDEMIVSGGENVYPIEVEKTLATHPDVAEAAVIGVDDEQYGQR 480 (537)
T ss_pred Ccc--ccchh-hccCCCEeeCceEEEeCCCcEEEeccccceeEECCEEECHHHHHHHHHhCCCEeeEEEEccCccccCCE
Confidence 998 44333 355899999999999999999999999999999999999999999999999999999999999888999
Q ss_pred eEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHH
Q 008636 486 PCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGD 546 (558)
Q Consensus 486 ~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~ 546 (558)
+++++++.++.. ...++++++++++|+.+++|..+++++++|+|++||++|++|++
T Consensus 481 ~~a~vv~~~~~~-----~~~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~gK~~r~~L~~ 536 (537)
T PRK13382 481 LAAFVVLKPGAS-----ATPETLKQHVRDNLANYKVPRDIVVLDELPRGATGKILRRELQA 536 (537)
T ss_pred EEEEEEECCCCC-----CCHHHHHHHHHHhccCCCCCcEEEEeccCCCCCCCCCcHHhhCC
Confidence 999999876543 67789999999999999999999999999999999999999864
No 17
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.2e-68 Score=554.61 Aligned_cols=480 Identities=29% Similarity=0.452 Sum_probs=415.8
Q ss_pred CChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEe
Q 008636 14 LTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNT 93 (558)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 93 (558)
+|+.++|++++.++|+++|+++.++.+||+||.+++.++|++|.+.|+++||+|+++++|++++++++|||+++|+++++
T Consensus 2 ~~~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~ 81 (483)
T PRK03640 2 ETMPNWLKQRAFLTPDRTAIEFEEKKVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEMILVIHALQQLGAVAVL 81 (483)
T ss_pred CcHHHHHHHHHHhCCCceEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhCCcEEEe
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhHHHhh
Q 008636 94 INTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENML 173 (558)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (558)
+++..+.+++..+++.+++++++++.+......... . ..+.++.
T Consensus 82 i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~----------~--------------------------~~~~~~~ 125 (483)
T PRK03640 82 LNTRLSREELLWQLDDAEVKCLITDDDFEAKLIPGI----------S--------------------------VKFAELM 125 (483)
T ss_pred cCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHhhhc----------c--------------------------ccHHHHh
Confidence 999999999999999999999999875443322110 0 0011111
Q ss_pred cCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhhhHHHHHHH
Q 008636 174 AKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAV 253 (558)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~ 253 (558)
...............+++++++|||||||.||+|.++|.++..........++++.+|++++.+|++|.+++..++.++.
T Consensus 126 ~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~ 205 (483)
T PRK03640 126 NGPKEEAEIQEEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNLGLTEDDCWLAAVPIFHISGLSILMRSVI 205 (483)
T ss_pred hcccccCCCCCCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhcCCCcCcEEEEecCHHHHHHHHHHHHHHh
Confidence 11111111112245679999999999999999999999998877666666678899999999999999999988899999
Q ss_pred hcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCcc-ccCCCCceEEEEecCCCChhhhHHhhhcCCeeeecc
Q 008636 254 VGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE-AKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGY 332 (558)
Q Consensus 254 ~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~-~~~~~~l~~v~~~g~~l~~~~~~~~~~~~~~v~~~Y 332 (558)
.|+++++.+..++..+++.++++++|++.++|+++..+.+... .....++|.++++|++++....+.+++.++++++.|
T Consensus 206 ~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~Y 285 (483)
T PRK03640 206 YGMRVVLVEKFDAEKINKLLQTGGVTIISVVSTMLQRLLERLGEGTYPSSFRCMLLGGGPAPKPLLEQCKEKGIPVYQSY 285 (483)
T ss_pred cCCEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCccccCCcceEEEEcCCCCCHHHHHHHHHhCCCeeeee
Confidence 9999999998999999999999999999999999999986542 234468999999999999999998888899999999
Q ss_pred cCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecccccccccCCch
Q 008636 333 GKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPE 412 (558)
Q Consensus 333 G~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~ 412 (558)
|+||++........ .......+++|.|.+++ +++|.++ +.+++.+ +.|||+++|++++.||+++++
T Consensus 286 G~tE~~~~~~~~~~---------~~~~~~~~~vG~p~~~~-~~~i~~~--~~~~~~g--~~Gel~v~g~~~~~gy~~~~~ 351 (483)
T PRK03640 286 GMTETASQIVTLSP---------EDALTKLGSAGKPLFPC-ELKIEKD--GVVVPPF--EEGEIVVKGPNVTKGYLNRED 351 (483)
T ss_pred ccCcccccccccCc---------ccccccCCCcccccCCc-EEEEecC--CCcCCCC--CceEEEEECcchhhhhcCCHH
Confidence 99998764333221 11123346899999998 9999885 3667766 789999999999999999999
Q ss_pred hhcccccCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCCCCCceeEEEEEe
Q 008636 413 ATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSL 492 (558)
Q Consensus 413 ~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~ 492 (558)
.+...|.+|||+|||++++++||.+++.||++|+++.+|.+|++.+||+.+.++++|.++++++.+++..++.++++++.
T Consensus 352 ~~~~~~~~~~~~tGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~ie~~i~~~~~v~~~~v~~~~~~~~~~~~~~~~~~ 431 (483)
T PRK03640 352 ATRETFQDGWFKTGDIGYLDEEGFLYVLDRRSDLIISGGENIYPAEIEEVLLSHPGVAEAGVVGVPDDKWGQVPVAFVVK 431 (483)
T ss_pred HHHHHHhcCCeeccceEEEcCCCCEEEeecccCeEEeCCEEECHHHHHHHHHhCCCeeEEEEEeCCCcccCCceEEEEEe
Confidence 99888899999999999999999999999999999999999999999999999999999999999888888888887875
Q ss_pred cCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHhh
Q 008636 493 KTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANS 550 (558)
Q Consensus 493 ~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~ 550 (558)
... .+.+++++++++.|+++++|+.|++++++|+|++||++|++|++++++
T Consensus 432 ~~~-------~~~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~gK~~r~~l~~~~~~ 482 (483)
T PRK03640 432 SGE-------VTEEELRHFCEEKLAKYKVPKRFYFVEELPRNASGKLLRHELKQLVEE 482 (483)
T ss_pred CCC-------CCHHHHHHHHHHhccCCCCCcEEEEeCCCCCCCccceeHHHHHHHHhh
Confidence 432 678899999999999999999999999999999999999999999875
No 18
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=9e-70 Score=579.52 Aligned_cols=520 Identities=23% Similarity=0.236 Sum_probs=409.3
Q ss_pred CCCCCChhhHHHHHhhcCCCCceEEE----CC-----ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHH
Q 008636 10 NSCPLTPLGFIERAATACDDCPSIIY----ND-----TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYEL 80 (558)
Q Consensus 10 ~~~~~tl~~~l~~~a~~~p~~~a~~~----~~-----~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~ 80 (558)
.....|+.++|+++++.+|+++|+.+ .+ +.+||+||.+++.++|++|+++|+++||+|+|+++|+++++++
T Consensus 40 ~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~ 119 (651)
T PLN02736 40 HPEIGTLHDNFVYAVETFRDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWLIV 119 (651)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHH
Confidence 34456999999999999999999953 11 4699999999999999999999999999999999999999999
Q ss_pred HHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCC
Q 008636 81 HFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRI 160 (558)
Q Consensus 81 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (558)
+|||+++|++++|+++.++.+++.+++++++++++|++.+....+.......+ ....++..+........ ...
T Consensus 120 ~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~~~~---~l~~ii~~~~~~~~~~~--~~~-- 192 (651)
T PLN02736 120 DHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLSEIP---SVRLIVVVGGADEPLPS--LPS-- 192 (651)
T ss_pred HHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhhcCC---CceEEEEECCCchhhhh--hhc--
Confidence 99999999999999999999999999999999999998776666555444322 23344444321100000 000
Q ss_pred CCCCchhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCch
Q 008636 161 PPADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240 (558)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 240 (558)
........+.++...............++++++|+|||||||.||||++||+++..........+++.++|++++.+|++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~~~~~~~~d~~l~~lPl~ 272 (651)
T PLN02736 193 GTGVEIVTYSKLLAQGRSSPQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSLSTKFYPSDVHISYLPLA 272 (651)
T ss_pred cCCcEEEEHHHHHHhcccCCCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhccCCCCCCEEEEeCCHH
Confidence 00011345566554432221122235678999999999999999999999999988877777777888999999999999
Q ss_pred hhhhhhHHHHHHHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCcc------------------------
Q 008636 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE------------------------ 296 (558)
Q Consensus 241 ~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~------------------------ 296 (558)
|..++..++.++..|+++++.+. ++..+++.+++++||+++++|.+++.+.+...
T Consensus 273 h~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (651)
T PLN02736 273 HIYERVNQIVMLHYGVAVGFYQG-DNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKESGGLKERLFNAAYNAKKQA 351 (651)
T ss_pred HHHHHHHHHHHHHcCCEEEEeCC-CHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 99999888889999999988764 78899999999999999999999988754310
Q ss_pred ------c-------------cCC-CCceEEEEecCCCChhhhHHhh-hcCCeeeecccCCCCCCcccccCCCCCCCCCCh
Q 008636 297 ------A-------------KQL-DRPVRILTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPA 355 (558)
Q Consensus 297 ------~-------------~~~-~~l~~v~~~g~~l~~~~~~~~~-~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~ 355 (558)
. ..+ +++|.+++||+++++++.+.+. .+++++++.||+||+++.++.....
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~g~~~~~~YG~TE~~~~~~~~~~~-------- 423 (651)
T PLN02736 352 LENGKNPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICFGGRVLEGYGMTETSCVISGMDEG-------- 423 (651)
T ss_pred HHcCCCCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHhCCCeEEEechHHhchheeccCCC--------
Confidence 0 011 4799999999999999999988 5689999999999998765543211
Q ss_pred hhhhhhcccCCceecccceeeEeCCCCCcc---cCCCCCeeeEEEEecccccccccCCchhhcccc-cCCceeeCceeEE
Q 008636 356 RERASLKARQGVRTIGLTEVDIVDPETGLS---VKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM-KDGRYYTGDVGMM 431 (558)
Q Consensus 356 ~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~---~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~ 431 (558)
....+++|.|.+++ +++|+|.+++.. ..+. ..|||+++||+++.|||++++.+.+.| .+|||+|||+|++
T Consensus 424 ---~~~~~~vG~p~pg~-~v~i~d~~~~~~~~~~~~~--~~GEl~vrgp~v~~GY~~~~~~t~~~~~~dgw~~TGDlg~~ 497 (651)
T PLN02736 424 ---DNLSGHVGSPNPAC-EVKLVDVPEMNYTSEDQPY--PRGEICVRGPIIFKGYYKDEVQTREVIDEDGWLHTGDIGLW 497 (651)
T ss_pred ---CCCCCccCCccCce-EEEEEEccccCcccCCCCC--CCceEEecCCccccccccCHHHHHhhhccCCCeeccceEEE
Confidence 12346799999998 999998533321 1222 359999999999999999999998888 5899999999999
Q ss_pred ccCCcEEEecccCCeeee-CceeechHHHHHHHhcCCCcceeEEEeeeCCCCCceeEEEEEecCCC--------C-C-CC
Q 008636 432 HPDGYLEIKDRSKDVIIS-GGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGT--------D-S-GG 500 (558)
Q Consensus 432 ~~~g~l~~~GR~~d~i~~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~--------~-~-~~ 500 (558)
|+||.+++.||++|+||. +|++|+|.+||++|.++|.|.+|+|++. ..++.++++|++.++. . . .+
T Consensus 498 d~dG~l~i~GR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~a~V~g~---~~~~~~~A~vv~~~~~~~~~~~~~~~~~~~ 574 (651)
T PLN02736 498 LPGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFVAQCFVYGD---SLNSSLVAVVVVDPEVLKAWAASEGIKYED 574 (651)
T ss_pred cCCCcEEEEEechhheEcCCCcEechHHHHHHHhcCCCeeEEEEEec---CCCceeEEEEEeCHHHHHHHHHHcCCCccC
Confidence 999999999999999995 7999999999999999999999999983 2467899999986531 1 0 00
Q ss_pred C--CCCHHHHHHHH---------HhcCCCccccCeEEEecccC------CCCCCcchhHHHHHHHhhcccc
Q 008636 501 M--MTTEKDIIQYC---------RARIPRYMVPKTVVFIDELP------KTATGKVQKYVLGDIANSMSMS 554 (558)
Q Consensus 501 ~--~~~~~~l~~~~---------~~~l~~~~~p~~i~~v~~~P------~t~~GK~~r~~l~~~~~~~~~~ 554 (558)
. ....+++++.+ +..|+.|++|+.|+++++.| +|++||++|+.+++.|++....
T Consensus 575 ~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lT~~~Ki~R~~i~~~~~~~i~~ 645 (651)
T PLN02736 575 LKQLCNDPRVRAAVLADMDAVGREAQLRGFEFAKAVTLVPEPFTVENGLLTPTFKVKRPQAKAYFAKAISD 645 (651)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHhcCCCcceeeeEEEEeCCCCcCCCCcCChhhhhhHHHHHHHHHHHHHH
Confidence 0 00011122221 12599999999999999876 7999999999999999887654
No 19
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.1e-68 Score=568.96 Aligned_cols=508 Identities=24% Similarity=0.326 Sum_probs=413.0
Q ss_pred hhHHHHHhhcCCCCceEEECC------ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcE
Q 008636 17 LGFIERAATACDDCPSIIYND------TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAI 90 (558)
Q Consensus 17 ~~~l~~~a~~~p~~~a~~~~~------~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (558)
.++|+++++.+|+++|+++.+ +.+||+||.+++.++|++|+++|+++||+|+++++|++++++++|||+++|++
T Consensus 70 ~~~l~~~~~~~p~~~Al~~~~~~~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav 149 (637)
T PRK00174 70 YNCLDRHLKTRGDKVAIIWEGDDPGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAVAMLACARIGAV 149 (637)
T ss_pred HHHHHHhhccCCCCeEEEEECCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCE
Confidence 456888888899999999743 47999999999999999999999999999999999999999999999999999
Q ss_pred EEeccccCChHHHHHHHhhcCccEEEEeCcCh---------HHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCC
Q 008636 91 FNTINTRLDARTISIILKHSESKLVFVDHLSS---------SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIP 161 (558)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (558)
+++++|.++.+++.++++.++++++|+++... ..+.+...... ....++......... ...
T Consensus 150 ~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-------~~~ 219 (637)
T PRK00174 150 HSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANCP---SVEKVIVVRRTGGDV-------DWV 219 (637)
T ss_pred EEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhCC---CccEEEEEcCCCCCc-------CcC
Confidence 99999999999999999999999999976532 22233322221 233444443221100 000
Q ss_pred CCCchhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHH-hcccccccCCCCEEEEecCch
Q 008636 162 PADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAV-DSLIDWVVPKQSVLLWTLPMF 240 (558)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~ 240 (558)
. .....+.++...... .........+++++|+|||||||.||+|+++|+++..... .....+.+.++|++++..|++
T Consensus 220 ~-~~~~~~~~~~~~~~~-~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 297 (637)
T PRK00174 220 E-GRDLWWHELVAGASD-ECEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFDYKDGDVYWCTADVG 297 (637)
T ss_pred C-CCcccHHHHHhhcCC-CCCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccCCCCCcEEEEcCCch
Confidence 0 012334454433221 1122335678999999999999999999999999865443 233446788899999999999
Q ss_pred hhhhh-hHHHHHHHhcceEEEecC----CCHHHHHHHHHHhCCcEEEehHHHHHHHhcCcc----ccCCCCceEEEEecC
Q 008636 241 HNNGW-SFTWGAAVVGATNVCLRK----FDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE----AKQLDRPVRILTAGS 311 (558)
Q Consensus 241 ~~~g~-~~~~~~l~~g~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~----~~~~~~l~~v~~~g~ 311 (558)
|..++ ..++.+++.|+++++.+. +++..+++.++++++|++.++|++++.|++... ...++++|.++++|+
T Consensus 298 ~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~Ge 377 (637)
T PRK00174 298 WVTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHPKKYDLSSLRLLGSVGE 377 (637)
T ss_pred HhhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCcccccCCccceeEEEEeCC
Confidence 99887 468889999999998753 479999999999999999999999999987642 345779999999999
Q ss_pred CCChhhhHHhhh-cC---CeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccC
Q 008636 312 PPPAPVLLRTES-LG---FIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVK 387 (558)
Q Consensus 312 ~l~~~~~~~~~~-~~---~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~ 387 (558)
++++++.+++.+ ++ +++++.||+||+++......... .....+++|.|.+++ +++|+|+ ++++++
T Consensus 378 ~l~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~---------~~~~~~~vG~p~~g~-~~~i~d~-~g~~~~ 446 (637)
T PRK00174 378 PINPEAWEWYYKVVGGERCPIVDTWWQTETGGIMITPLPGA---------TPLKPGSATRPLPGI-QPAVVDE-EGNPLE 446 (637)
T ss_pred CCCHHHHHHHHHHhCCCCCceEecccccccCCceEecCCCC---------CCcCCCcccCCCCCc-eEEEECC-CCCCCC
Confidence 999999988874 43 78999999999987655432110 112245789999998 9999997 688888
Q ss_pred CCCCeeeEEEEec--ccccccccCCchhhcccc---cCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHH
Q 008636 388 RDGQTRGEIVMRG--GSLMLGYLKDPEATSKCM---KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESV 462 (558)
Q Consensus 388 ~~~~~~Gel~v~~--~~~~~gy~~~~~~~~~~~---~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~ 462 (558)
.+ +.|||+++| |+++.|||++++.+...+ .+|||+|||+|++++||.+++.||+||+||++|++|+|.+||++
T Consensus 447 ~g--~~Gel~v~g~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~ 524 (637)
T PRK00174 447 GG--EGGNLVIKDPWPGMMRTIYGDHERFVKTYFSTFKGMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESA 524 (637)
T ss_pred CC--CcEEEEEcCCCCcccccccCCHHHHHHhhhcCCCCEEECCceEEEcCCCcEEEEEecccEEEeCCEEECHHHHHHH
Confidence 77 789999999 689999999998776654 47899999999999999999999999999999999999999999
Q ss_pred HhcCCCcceeEEEeeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhH
Q 008636 463 LYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKY 542 (558)
Q Consensus 463 l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~ 542 (558)
|.++|+|.+++|++.+++..|+.+++++++.++.... ....++|+++++++|++++.|..++++++||+|++||++|+
T Consensus 525 l~~~~~V~~~~Vvg~~~~~~g~~~~a~vv~~~~~~~~--~~~~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~GKi~R~ 602 (637)
T PRK00174 525 LVAHPKVAEAAVVGRPDDIKGQGIYAFVTLKGGEEPS--DELRKELRNWVRKEIGPIAKPDVIQFAPGLPKTRSGKIMRR 602 (637)
T ss_pred HHhCCCcceEEEEeeEcCCCCeEEEEEEEECCCCCCC--HHHHHHHHHHHHhhcCCccCCCEEEEcCCCCCCCCcchHHH
Confidence 9999999999999999998999999999988764310 01257899999999999999999999999999999999999
Q ss_pred HHHHHHhhc
Q 008636 543 VLGDIANSM 551 (558)
Q Consensus 543 ~l~~~~~~~ 551 (558)
+|+++.++.
T Consensus 603 ~L~~~~~~~ 611 (637)
T PRK00174 603 ILRKIAEGE 611 (637)
T ss_pred HHHHHHcCC
Confidence 999997655
No 20
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.8e-68 Score=559.00 Aligned_cols=522 Identities=26% Similarity=0.366 Sum_probs=435.0
Q ss_pred CCCCCCCCChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhC-CCCCCCEEEEEcCCchhHHHHHHHHh
Q 008636 7 NPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSF-GINPGHVVSVIAPNIPAMYELHFAVP 85 (558)
Q Consensus 7 ~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~-Gv~~gd~V~i~~~~~~~~~~~~lA~~ 85 (558)
...+.+..|+.++|.+.+..+|+++|+.+.++++||+||.+++.++|.+|.+. |+++|++|+++++|++++++++|||+
T Consensus 3 ~~~~~~~~tl~~~l~~~a~~~~~~~a~~~~~~~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~ 82 (546)
T PRK08314 3 KSLTLPETSLFHNLEVSARRYPDKTAIVFYGRAISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQFVIAYYAIL 82 (546)
T ss_pred CCCCCCCCCHHHHHHHHHHHcCCCcceeecCceecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHHHHHHHHHH
Confidence 34556788999999999999999999999999999999999999999999998 99999999999999999999999999
Q ss_pred hcCcEEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCC--------C--
Q 008636 86 MSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSS--------S-- 155 (558)
Q Consensus 86 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-- 155 (558)
++|++++|++|..+.+++.++++.++++++|++.+....+........ ...++............ .
T Consensus 83 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (546)
T PRK08314 83 RANAVVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKVAPAVGNLR----LRHVIVAQYSDYLPAEPEIAVPAWLRAE 158 (546)
T ss_pred HcCcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHHHhhccC----cceEEEecchhhcccccccCcccccccc
Confidence 999999999999999999999999999999999877666655433221 22222221111000000 0
Q ss_pred CCCCCCCCCchhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEE
Q 008636 156 PPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLW 235 (558)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (558)
..........+..+++....... .......++++++|+|||||||.||+|.++|+++..........+.+..+|++++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~ 236 (546)
T PRK08314 159 PPLQALAPGGVVAWKEALAAGLA--PPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWSNSTPESVVLA 236 (546)
T ss_pred cccccccccccccHHHHhcccCC--CCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCceEEE
Confidence 00000001123345555443221 1123356789999999999999999999999999888777766778889999999
Q ss_pred ecCchhhhhh-hHHHHHHHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc--cccCCCCceEEEEecCC
Q 008636 236 TLPMFHNNGW-SFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRPVRILTAGSP 312 (558)
Q Consensus 236 ~~p~~~~~g~-~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~--~~~~~~~l~~v~~~g~~ 312 (558)
.+|++|..|+ ..++.++..|+++++.+.+++..+++.++++++|++.++|.++..++... ....+++++.+++||++
T Consensus 237 ~~p~~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~~~~~~~~~l~~~~~gG~~ 316 (546)
T PRK08314 237 VLPLFHVTGMVHSMNAPIYAGATVVLMPRWDREAAARLIERYRVTHWTNIPTMVVDFLASPGLAERDLSSLRYIGGGGAA 316 (546)
T ss_pred EcCchHHHHHHHHHHHHHHcCCeEEecCCCCHHHHHHHHHHhcCceecccHHHHHHHHhCCCccccCchhhheeeecccc
Confidence 9999999997 56778899999999999899999999999999999999999999988754 33456789999999999
Q ss_pred CChhhhHHhh-hcCCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCC
Q 008636 313 PPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQ 391 (558)
Q Consensus 313 l~~~~~~~~~-~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~ 391 (558)
+++++++++. .++.++++.||+||++......... .....++|.|.++. +++|+|++++..++.+
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~-----------~~~~~~~G~~~~g~-~~~i~d~~~~~~~~~g-- 382 (546)
T PRK08314 317 MPEAVAERLKELTGLDYVEGYGLTETMAQTHSNPPD-----------RPKLQCLGIPTFGV-DARVIDPETLEELPPG-- 382 (546)
T ss_pred CCHHHHHHHHHHcCCcEEecccccccccceecCCCc-----------CCCCCccCcccCCe-EEEEEeCCCCcCCCCC--
Confidence 9999999988 5689999999999998765543211 11235789999998 9999998788989888
Q ss_pred eeeEEEEecccccccccCCchhhccccc----CCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCC
Q 008636 392 TRGEIVMRGGSLMLGYLKDPEATSKCMK----DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHP 467 (558)
Q Consensus 392 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~----~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~ 467 (558)
+.|||+++|++++.||+++++.+...|. ++||+|||+|+++++|.+++.||+||+|+.+|.+|+|.+||++|.++|
T Consensus 383 ~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~i~~~~ 462 (546)
T PRK08314 383 EVGEIVVHGPQVFKGYWNRPEATAEAFIEIDGKRFFRTGDLGRMDEEGYFFITDRLKRMINASGFKVWPAEVENLLYKHP 462 (546)
T ss_pred CceEEEEECCchhccccCChhHhhhhhhhcCCCceEecCCEEEEcCCCcEEEEecchhhEEeCCEEECHHHHHHHHHhCc
Confidence 7899999999999999999988887762 359999999999999999999999999999999999999999999999
Q ss_pred CcceeEEEeeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHH
Q 008636 468 MVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDI 547 (558)
Q Consensus 468 ~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~ 547 (558)
+|.+++|++.+++..++.+++++++.++.... .+.++++++++++|+++++|+.++++++||+|.+||++|+.|++.
T Consensus 463 ~v~~~~v~~~~~~~~~~~~~a~v~~~~~~~~~---~~~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~GKv~r~~L~~~ 539 (546)
T PRK08314 463 AIQEACVIATPDPRRGETVKAVVVLRPEARGK---TTEEEIIAWAREHMAAYKYPRIVEFVDSLPKSGSGKILWRQLQEQ 539 (546)
T ss_pred chheEEEEeCCCcccCceeEEEEEECCCCCCC---CCHHHHHHHHHHhcccCCCCcEEEEecCCCCCCccceeHHHHHHH
Confidence 99999999999988899999999987764322 456899999999999999999999999999999999999999987
Q ss_pred Hhhc
Q 008636 548 ANSM 551 (558)
Q Consensus 548 ~~~~ 551 (558)
....
T Consensus 540 ~~~~ 543 (546)
T PRK08314 540 EKAR 543 (546)
T ss_pred Hhhh
Confidence 6543
No 21
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=1.6e-68 Score=557.78 Aligned_cols=502 Identities=20% Similarity=0.230 Sum_probs=400.2
Q ss_pred CCCCChhhHHHHHhhcCCCCceEEECC-ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCc
Q 008636 11 SCPLTPLGFIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGA 89 (558)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~~~-~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 89 (558)
....++.+.|.+.++++|+++|+.+.+ +++||+||.+++.++|+.|.+. +||+|+|+++|++++++++|||+++|+
T Consensus 16 ~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~Ty~el~~~~~~lA~~L~~~---~gd~Val~~~n~~e~~~~~lA~~~~G~ 92 (539)
T PRK06334 16 RSGKTVLESFLKLCSEMTTATVCWDEQLGKLSYNQVRKAVIALATKVSKY---PDQHIGIMMPASAGAYIAYFATLLSGK 92 (539)
T ss_pred CcCCcHHHHHHHHHHhCCCceEEEeCCCCcccHHHHHHHHHHHHHHHhhc---cCCeEEEEcCCchHHHHHHHHHHhcCC
Confidence 344689999999999999999998765 7999999999999999999873 899999999999999999999999999
Q ss_pred EEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhH
Q 008636 90 IFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTY 169 (558)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (558)
+++|+++.++.+++.++++.++++++|++.+....+.+....... ....++.+....... .... ....
T Consensus 93 v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~---~~~~-------~~~~ 160 (539)
T PRK06334 93 IPVMINWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTHGEDAE--YPFSLIYMEEVRKEL---SFWE-------KCRI 160 (539)
T ss_pred eeEecCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhhhcccc--ccccEEEEehhhhhc---cHHH-------hhhh
Confidence 999999999999999999999999999987665554443221000 011233322110000 0000 0000
Q ss_pred HHhhcCCCC---CCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhhh
Q 008636 170 ENMLAKGDP---QFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWS 246 (558)
Q Consensus 170 ~~~~~~~~~---~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~ 246 (558)
......... .........++++++|+|||||||.||+|.++|+++..........+.+..+|++++.+|++|..|+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~ 240 (539)
T PRK06334 161 GIYMSIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFFSPKEDDVMMSFLPPFHAYGFN 240 (539)
T ss_pred hhhhcCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCCCCCceEEEecchHhhhhhH
Confidence 000000000 00001234678999999999999999999999999987776666677788999999999999999984
Q ss_pred -HHHHHHHhcceEEEec-CCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc--cccCCCCceEEEEecCCCChhhhHHhh
Q 008636 247 -FTWGAAVVGATNVCLR-KFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRPVRILTAGSPPPAPVLLRTE 322 (558)
Q Consensus 247 -~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~--~~~~~~~l~~v~~~g~~l~~~~~~~~~ 322 (558)
.++.++..|+++++.. .+++..+++.|+++++|++.++|++++.|++.. ....++++|.+++||+++++++.+++.
T Consensus 241 ~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~ 320 (539)
T PRK06334 241 SCTLFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQESCLPSLRFVVIGGDAFKDSLYQEAL 320 (539)
T ss_pred HHHHHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcccccccccEEEECCccCCHHHHHHHH
Confidence 4778889999998875 478999999999999999999999999998765 334678999999999999999999988
Q ss_pred h-c-CCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEec
Q 008636 323 S-L-GFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRG 400 (558)
Q Consensus 323 ~-~-~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~ 400 (558)
+ + ++.+++.||+||++.++..+... ......++|.|.+++ +++|+|++++.+++.| +.|||+|+|
T Consensus 321 ~~~~~~~i~~~YG~TE~~~~~~~~~~~----------~~~~~~~vG~p~~g~-~v~i~d~~~~~~~~~g--~~Gel~v~g 387 (539)
T PRK06334 321 KTFPHIQLRQGYGTTECSPVITINTVN----------SPKHESCVGMPIRGM-DVLIVSEETKVPVSSG--ETGLVLTRG 387 (539)
T ss_pred HHCCCCeEEecccccccCceEEeccCC----------CCCCCCcCceecCCC-EEEEEcCCCCccCCCC--ceEEEEEec
Confidence 4 4 78999999999998766543211 011234689999998 9999998778888888 789999999
Q ss_pred ccccccccCCchhhcccc--cCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcce------e
Q 008636 401 GSLMLGYLKDPEATSKCM--KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNE------A 472 (558)
Q Consensus 401 ~~~~~gy~~~~~~~~~~~--~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~------~ 472 (558)
++++.|||++++.+.... .+|||+|||+|++|++|.+++.||.+|+||++|++|+|.+||++|.+||+|.+ +
T Consensus 388 ~~~~~GY~~~~~~~~~~~~~~~~w~~TGD~g~~d~~G~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~~~~v~~~~~~~~~ 467 (539)
T PRK06334 388 TSLFSGYLGEDFGQGFVELGGETWYVTGDLGYVDRHGELFLKGRLSRFVKIGAEMVSLEALESILMEGFGQNAADHAGPL 467 (539)
T ss_pred CcccccccCCcccccceeeCCceeEECCCEEEECCCCeEEEEeccCCeEEECCEEECHHHHHHHHHHccCCccccccCce
Confidence 999999999987543222 36799999999999999999999999999999999999999999999999987 7
Q ss_pred EEEeeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhc-CCCccccCeEEEecccCCCCCCcchhHHHHHHHhhc
Q 008636 473 AVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRAR-IPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSM 551 (558)
Q Consensus 473 ~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~-l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~~ 551 (558)
+|++.+++. ..++++++. . .+.+++++++++. ++.|+.|+.++++++||+|++||++|+.|+++..++
T Consensus 468 ~v~~~~~~~--~~~~~~~~~--~-------~~~~~~~~~l~~~~~~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~ 536 (539)
T PRK06334 468 VVCGLPGEK--VRLCLFTTF--P-------TSISEVNDILKNSKTSSILKISYHHQVESIPMLGTGKPDYCSLNALAKSL 536 (539)
T ss_pred EEEcCCCCc--eEEEEEEec--c-------CChHHHHHHHHhcCCcccccchheeeecccccccCCcccHHHHHHHHHHh
Confidence 777776532 234444432 1 3457888999886 788999999999999999999999999999997764
No 22
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=7.7e-68 Score=554.64 Aligned_cols=503 Identities=29% Similarity=0.392 Sum_probs=424.2
Q ss_pred CCChhhHHHHHhhcCCCCceEEEC--CccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcE
Q 008636 13 PLTPLGFIERAATACDDCPSIIYN--DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAI 90 (558)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~--~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (558)
.+|+.+++.+++..+|+++|+++. ++++||.||.+++.++|+.|.+.|+++||+|+++++|++++++++|||+++|++
T Consensus 22 ~~~~~~~l~~~~~~~~~~~a~~~~~~~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~la~~~~G~~ 101 (537)
T PLN02246 22 HLPLHDYCFERLSEFSDRPCLIDGATGRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPEFVLAFLGASRRGAV 101 (537)
T ss_pred CCcHHHHHHHHHHhCCCCeEEEecCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHHcCEE
Confidence 468999999999999999999875 478999999999999999999999999999999999999999999999999999
Q ss_pred EEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhHH
Q 008636 91 FNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYE 170 (558)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (558)
++|++|..+.+++..+++.++++++|++......+.+..... ...++.++.... ....+.
T Consensus 102 ~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~-----~~~~i~~~~~~~---------------~~~~~~ 161 (537)
T PLN02246 102 TTTANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGLAEDD-----GVTVVTIDDPPE---------------GCLHFS 161 (537)
T ss_pred EecCCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHHhhcC-----CceEEEeCCCCC---------------CceeHH
Confidence 999999999999999999999999999887766665543210 123333332110 012233
Q ss_pred HhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcc----cccccCCCCEEEEecCchhhhhhh
Q 008636 171 NMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSL----IDWVVPKQSVLLWTLPMFHNNGWS 246 (558)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~----~~~~~~~~~~~~~~~p~~~~~g~~ 246 (558)
++........ ......++++++++|||||||.||+|.++|+++........ ..+.+..+|+++...|++|..++.
T Consensus 162 ~~~~~~~~~~-~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~ 240 (537)
T PLN02246 162 ELTQADENEL-PEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLN 240 (537)
T ss_pred HHhcCCCCCC-CCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHH
Confidence 3333222111 12234678999999999999999999999999976655432 246788999999999999999884
Q ss_pred -HHHHHHHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCcc--ccCCCCceEEEEecCCCChhhhHHhhh
Q 008636 247 -FTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE--AKQLDRPVRILTAGSPPPAPVLLRTES 323 (558)
Q Consensus 247 -~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~--~~~~~~l~~v~~~g~~l~~~~~~~~~~ 323 (558)
.++.++..|+++++.+.+++..+++.++++++|++.++|.++..|.+... ...++++|.+++||+++++++.+.+.+
T Consensus 241 ~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~ 320 (537)
T PLN02246 241 SVLLCGLRVGAAILIMPKFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVEKYDLSSIRMVLSGAAPLGKELEDAFRA 320 (537)
T ss_pred HHHHHHHhcCCEEEEeCCCCHHHHHHHHHHhCceEEEcchHHHHHHhcCccccccCccceeEEEEecCcCCHHHHHHHHH
Confidence 46778899999999998999999999999999999999999999987652 335678999999999999999999985
Q ss_pred -c-CCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecc
Q 008636 324 -L-GFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGG 401 (558)
Q Consensus 324 -~-~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~ 401 (558)
+ +..+++.||+||++.++..+..... ........++|.+.++. +++|+|++++.+++.+ +.|||+++|+
T Consensus 321 ~~~~~~~~~~YG~tE~~~~~~~~~~~~~------~~~~~~~~~~G~~~~~~-~~~i~d~~~~~~~~~g--~~Gel~v~g~ 391 (537)
T PLN02246 321 KLPNAVLGQGYGMTEAGPVLAMCLAFAK------EPFPVKSGSCGTVVRNA-ELKIVDPETGASLPRN--QPGEICIRGP 391 (537)
T ss_pred HcCCCeEeccccccccCcccccccccCC------CCccccCCccccccCCc-EEEEecCCCCCcCCCC--CceEEEEECC
Confidence 4 7889999999999876554321100 00112235789999998 9999998788889888 7899999999
Q ss_pred cccccccCCchhhcccc-cCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCC
Q 008636 402 SLMLGYLKDPEATSKCM-KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480 (558)
Q Consensus 402 ~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~ 480 (558)
.++.||+++++.+...+ .+|||+|||+|+++++|.+++.||++|+|+.+|.+|+|.+||+.|.++|+|.+++|++.+++
T Consensus 392 ~~~~GY~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~dd~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~ 471 (537)
T PLN02246 392 QIMKGYLNDPEATANTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLISHPSIADAAVVPMKDE 471 (537)
T ss_pred chhccccCCchhhhhcccCCCCeeecceEEEeCCCeEEEEecccceEEECCEEECcHHHHHHHHhCCCeeEEEEEcccCc
Confidence 99999999999888887 58999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHhh
Q 008636 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANS 550 (558)
Q Consensus 481 ~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~ 550 (558)
..++.++++++..++.. .+.+++++++++++++++.|+.++++++||+|++||++|.+|++++.+
T Consensus 472 ~~~~~~~~~v~~~~~~~-----~~~~~l~~~l~~~l~~~~~p~~i~~~~~~P~t~~GKi~r~~L~~~~~~ 536 (537)
T PLN02246 472 VAGEVPVAFVVRSNGSE-----ITEDEIKQFVAKQVVFYKRIHKVFFVDSIPKAPSGKILRKDLRAKLAA 536 (537)
T ss_pred cCCceeEEEEEeCCCCC-----CCHHHHHHHHHhhCcCccccceEEEeccCCCCCcchhhHHHHHHHHhc
Confidence 88899999998876643 577899999999999999999999999999999999999999999865
No 23
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=8.1e-68 Score=553.67 Aligned_cols=505 Identities=28% Similarity=0.385 Sum_probs=424.9
Q ss_pred CCCCCCCCCChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHh
Q 008636 6 PNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVP 85 (558)
Q Consensus 6 ~~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~ 85 (558)
.++.+..++++.++|+++++.+|+++|+++.++.+||+||.+++.++|..|.+.|+++|++|+++++|++++++++|||+
T Consensus 13 ~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~~~~~lA~~ 92 (542)
T PRK06155 13 VDPLPPSERTLPAMLARQAERYPDRPLLVFGGTRWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEFLDVFLGCA 92 (542)
T ss_pred cccCCccccCHHHHHHHHHHHCCCCeEEEeCCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHH
Confidence 45667788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCcEEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCc
Q 008636 86 MSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADF 165 (558)
Q Consensus 86 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (558)
++|++++|+++.++.+++..+++.+++++++++.+....+.+..... .....++.++..... .....
T Consensus 93 ~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~----~~~~~------ 159 (542)
T PRK06155 93 WLGAIAVPINTALRGPQLEHILRNSGARLLVVEAALLAALEAADPGD---LPLPAVWLLDAPASV----SVPAG------ 159 (542)
T ss_pred HhCCEEEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHHHhcccc---cCcceEEEecCcccc----ccccc------
Confidence 99999999999999999999999999999999887766655443221 112344444322110 00000
Q ss_pred hhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhh
Q 008636 166 VDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGW 245 (558)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~ 245 (558)
+. ..++. ..... .......++++++++|||||||.||+|.++|+++..........+.++.++++++..|++|..++
T Consensus 160 ~~-~~~~~-~~~~~-~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~~~ 236 (542)
T PRK06155 160 WS-TAPLP-PLDAP-APAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDLEIGADDVLYTTLPLFHTNAL 236 (542)
T ss_pred cc-hhhhc-ccCCC-CCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhcCCCCCCEEEEecCHHHHHHH
Confidence 00 00000 00011 11123467899999999999999999999999998777666677788999999999999999999
Q ss_pred hHHHHHHHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCccc--cCCCCceEEEEecCCCChhhhHHhh-
Q 008636 246 SFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLDRPVRILTAGSPPPAPVLLRTE- 322 (558)
Q Consensus 246 ~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~--~~~~~l~~v~~~g~~l~~~~~~~~~- 322 (558)
..++.+++.|+++++.+.+++..+++.++++++|++.++|+++..|.+.... ...++++.++.+| +++.+...+.
T Consensus 237 ~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~g~--~~~~~~~~~~~ 314 (542)
T PRK06155 237 NAFFQALLAGATYVLEPRFSASGFWPAVRRHGATVTYLLGAMVSILLSQPARESDRAHRVRVALGPG--VPAALHAAFRE 314 (542)
T ss_pred HHHHHHHHcCceEEeeCCCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCccccccCceEEEEEcC--CCHHHHHHHHH
Confidence 8889999999999999888999999999999999999999999999877632 2345777666554 5677777777
Q ss_pred hcCCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecc-
Q 008636 323 SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGG- 401 (558)
Q Consensus 323 ~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~- 401 (558)
.+++++++.||+||+++++..+.. ....+++|.+.+++ .++|+|+ ++++++.+ +.|||+++|+
T Consensus 315 ~~~~~v~~~YG~tE~~~~~~~~~~------------~~~~~~vG~~~~~~-~~~i~d~-~~~~~~~g--~~Gei~v~~~~ 378 (542)
T PRK06155 315 RFGVDLLDGYGSTETNFVIAVTHG------------SQRPGSMGRLAPGF-EARVVDE-HDQELPDG--EPGELLLRADE 378 (542)
T ss_pred HcCCCEEeeecccccCccccCCCC------------CCCCCCcCccCCCc-eEEEECC-CCCCCCCC--CceEEEEecCC
Confidence 569999999999999887654321 12345788899888 9999997 68888888 7899999998
Q ss_pred --cccccccCCchhhcccccCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeC
Q 008636 402 --SLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479 (558)
Q Consensus 402 --~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~ 479 (558)
+++.||+++++.+...|.++||+|||+|++++||.+++.||.+|+|+.+|.+|+|.+||++|.++|+|.+++|+++++
T Consensus 379 ~~~~~~GY~~~~~~~~~~~~~~~~~TGD~~~~~~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~~v~~ 458 (542)
T PRK06155 379 PFAFATGYFGMPEKTVEAWRNLWFHTGDRVVRDADGWFRFVDRIKDAIRRRGENISSFEVEQVLLSHPAVAAAAVFPVPS 458 (542)
T ss_pred ccccchhhcCCHHHHHHhhcCCcEeccceEEEcCCceEEEEecCCCEEEeCCEEECHHHHHHHHHhCCCeeEEEEEeecc
Confidence 699999999999888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHh
Q 008636 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIAN 549 (558)
Q Consensus 480 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~ 549 (558)
+..++.+.+++++..+.. .+..+++++++++++++++|..|++++++|+|++||++|++|++++-
T Consensus 459 ~~~~~~~~~~v~~~~~~~-----~~~~~~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKi~r~~l~~~~~ 523 (542)
T PRK06155 459 ELGEDEVMAAVVLRDGTA-----LEPVALVRHCEPRLAYFAVPRYVEFVAALPKTENGKVQKFVLREQGV 523 (542)
T ss_pred cccCceEEEEEEECCCCC-----CCHHHHHHHHHhhCcCccCCcEEEEeccCCCCcccceeHHHHHhhcc
Confidence 888888888888776554 67889999999999999999999999999999999999999998763
No 24
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=1.1e-67 Score=556.02 Aligned_cols=549 Identities=48% Similarity=0.843 Sum_probs=434.0
Q ss_pred CCCCCCCCCCCCCCChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHH
Q 008636 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYEL 80 (558)
Q Consensus 1 ~~~~~~~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~ 80 (558)
+|++-....++++.++++.|++.+..+|+++|+.+.++.+||+||.+++.++|.+|.+.|+++||+|+++++|+++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~ 86 (567)
T PLN02479 7 IDDLPKNAANYTALTPLWFLERAAVVHPTRKSVVHGSVRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMYEA 86 (567)
T ss_pred cccccCccccccccCHHHHHHHHHhhCCCceEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHH
Confidence 46777888888999999999999999999999999889999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCC----CCCCCcEEEEcCCccccCCCCC
Q 008636 81 HFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPP----HSKTPKLVLITDDKEISSSSSP 156 (558)
Q Consensus 81 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 156 (558)
+|||+++|++++++++.++.+++..+++.++++++|++++..+...+....... ......++.+........ ..
T Consensus 87 ~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 164 (567)
T PLN02479 87 HFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPK--SL 164 (567)
T ss_pred HHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecCCcCCcc--cc
Confidence 999999999999999999999999999999999999988776555544332111 011223333322110000 00
Q ss_pred CCCCCCCCchhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEe
Q 008636 157 PPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWT 236 (558)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (558)
.... ......+.+++....+..........+++++++|||||||.||+|.++|+++..........+.+..++++++.
T Consensus 165 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (567)
T PLN02479 165 QYAL--GKGAIEYEKFLETGDPEFAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIWGMNEGAVYLWT 242 (567)
T ss_pred cccc--ccCcccHHHHHhccccccccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhcCCCCCCEEEEe
Confidence 0000 01123455555543322221122334577889999999999999999999986655555556677889999999
Q ss_pred cCchhhhhhhHHHHHHHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCccc---cCCCCceEEEEecCCC
Q 008636 237 LPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA---KQLDRPVRILTAGSPP 313 (558)
Q Consensus 237 ~p~~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~---~~~~~l~~v~~~g~~l 313 (558)
.|++|..++...+.....++..+.+..+++..+++.++++++|++.++|.++..|.+.... ..+++++.++++|+++
T Consensus 243 ~p~~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~~~~~G~~~ 322 (567)
T PLN02479 243 LPMFHCNGWCFTWTLAALCGTNICLRQVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSETILPLPRVVHVMTAGAAP 322 (567)
T ss_pred cchhhhhhHHHHHHHHhhcCceEeccCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhcccccccceeEEEEcCCCC
Confidence 9999999986655544445555566778999999999999999999999999999876522 2467899999999999
Q ss_pred ChhhhHHhhhcCCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCee
Q 008636 314 PAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTR 393 (558)
Q Consensus 314 ~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~ 393 (558)
++.+.+++.+.+.++++.||+||+++.+..+...+.+...+...........|.+.++...++|+|++++.+++.++++.
T Consensus 323 ~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~~~~~g~~~ 402 (567)
T PLN02479 323 PPSVLFAMSEKGFRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKPVPADGKTM 402 (567)
T ss_pred CHHHHHHHHhcCCceecccccccccccccceeccccccccCcccccccccccCCCcCCcCceeEEcCCCCcccCCCCCCc
Confidence 99999998877899999999999876554443222222111111111123567777776448899976788887765568
Q ss_pred eEEEEecccccccccCCchhhcccccCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeE
Q 008636 394 GEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAA 473 (558)
Q Consensus 394 Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~ 473 (558)
|||+++|++++.|||++++.+...|.+|||+|||+|+++++|.+++.||.+|+|+.+|.+|+|.+||..|.++|.|.+++
T Consensus 403 GEl~v~g~~~~~GY~~~~~~t~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~ 482 (567)
T PLN02479 403 GEIVMRGNMVMKGYLKNPKANEEAFANGWFHSGDLGVKHPDGYIEIKDRSKDIIISGGENISSLEVENVVYTHPAVLEAS 482 (567)
T ss_pred eEEEEeccchhhhhhcCcccccchhcCCceecceeEEEcCCccEEEeccccceEEeCCEEEcHHHHHHHHHhCcccceee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHhhccc
Q 008636 474 VVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSMSM 553 (558)
Q Consensus 474 v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~~~~ 553 (558)
|++.+++..++.+++++++..+....+.....+++.++++++|+.++.|+.+++ ++||+|++||++|..|++.+.....
T Consensus 483 v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~-~~iP~t~~gKv~r~~L~~~~~~~~~ 561 (567)
T PLN02479 483 VVARPDERWGESPCAFVTLKPGVDKSDEAALAEDIMKFCRERLPAYWVPKSVVF-GPLPKTATGKIQKHVLRAKAKEMGP 561 (567)
T ss_pred EEeccchhcCceeEEEEEecCcccccchhhhHHHHHHHHHhhcccccCCceEEe-ccCCCCCccCeeHHHHHHHHHhhCC
Confidence 999988887889999999876643211124567899999999999999998776 7899999999999999998877544
Q ss_pred c
Q 008636 554 S 554 (558)
Q Consensus 554 ~ 554 (558)
+
T Consensus 562 ~ 562 (567)
T PLN02479 562 V 562 (567)
T ss_pred c
Confidence 3
No 25
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=4.5e-68 Score=558.19 Aligned_cols=504 Identities=26% Similarity=0.368 Sum_probs=412.6
Q ss_pred CChhhHHHHHhhcCCCCceEEECC--ccccHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCchhHHHHHHHHhhcCcE
Q 008636 14 LTPLGFIERAATACDDCPSIIYND--TTYTWSQTYRRCLQLASSLSS-FGINPGHVVSVIAPNIPAMYELHFAVPMSGAI 90 (558)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~--~~~Ty~~l~~~v~~la~~L~~-~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (558)
.++.+.+... ..+|+++|+++.. ..+||+||.+++.++|++|++ +|+++||+|+++++|++++++++|||+++|++
T Consensus 40 ~~~~~~l~~~-~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~~~~~la~~~~G~v 118 (560)
T PLN02574 40 LDAVSFIFSH-HNHNGDTALIDSSTGFSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYFPVIFLAVLSLGGI 118 (560)
T ss_pred CCHHHHHhcC-cccCCCCEEEECCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchHHHHHHHHHHhCeE
Confidence 3443343333 5689999999854 379999999999999999999 99999999999999999999999999999999
Q ss_pred EEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhHH
Q 008636 91 FNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYE 170 (558)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (558)
+++++|..+.+++..+++.++++++|++.+....+... ...++.+...... . ... .....+.
T Consensus 119 ~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~-~--~~~------~~~~~~~ 180 (560)
T PLN02574 119 VTTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSPL---------GVPVIGVPENYDF-D--SKR------IEFPKFY 180 (560)
T ss_pred EeCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHHHhc---------CCcEEecCccccc-c--cCc------cCcccHH
Confidence 99999999999999999999999999987655444321 1122222211100 0 000 0012344
Q ss_pred HhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhccc----ccc-cCCCCEEEEecCchhhhhh
Q 008636 171 NMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLI----DWV-VPKQSVLLWTLPMFHNNGW 245 (558)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~----~~~-~~~~~~~~~~~p~~~~~g~ 245 (558)
++........ ......++++++++|||||||.||+|.++|+++......... .+. ....++++..+|++|..|+
T Consensus 181 ~~~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~ 259 (560)
T PLN02574 181 ELIKEDFDFV-PKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMFHIYGL 259 (560)
T ss_pred HHhhcCCccc-ccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecchHHHHHH
Confidence 4443322211 122345789999999999999999999999998776554332 122 2356788999999999998
Q ss_pred hH-HHHHHHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCcc---ccCCCCceEEEEecCCCChhhhHHh
Q 008636 246 SF-TWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE---AKQLDRPVRILTAGSPPPAPVLLRT 321 (558)
Q Consensus 246 ~~-~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~---~~~~~~l~~v~~~g~~l~~~~~~~~ 321 (558)
.. ++.++..|+++++.+.+++..+++.++++++|++.++|+++..|.+... ...++++|.+++||++++++..+++
T Consensus 260 ~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~ 339 (560)
T PLN02574 260 SLFVVGLLSLGSTIVVMRRFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGVCGEVLKSLKQVSCGAAPLSGKFIQDF 339 (560)
T ss_pred HHHHHHHHhcCCEEEEecCCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCccccccCccccceEEEEecccCCHHHHHHH
Confidence 54 5667778999999988999999999999999999999999999988752 3457899999999999999999998
Q ss_pred h-hc-CCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEe
Q 008636 322 E-SL-GFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMR 399 (558)
Q Consensus 322 ~-~~-~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~ 399 (558)
. .+ ++.+++.||+||++.++...... .......++|.+.+++ +++|+|++++.+++.+ +.|||+|+
T Consensus 340 ~~~~~~~~v~~~YG~tE~~~~~~~~~~~---------~~~~~~~~vG~~~~~~-~v~i~d~~~g~~~~~g--~~Gei~v~ 407 (560)
T PLN02574 340 VQTLPHVDFIQGYGMTESTAVGTRGFNT---------EKLSKYSSVGLLAPNM-QAKVVDWSTGCLLPPG--NCGELWIQ 407 (560)
T ss_pred HHHCCCCcEEecccccccCceeecCCCc---------cccCCCCceeeeCCCc-EEEEEeCCCCcCCCCC--CCeEEEEE
Confidence 7 44 78999999999998665432111 1112345789999998 9999997789988888 78999999
Q ss_pred cccccccccCCchhhcccc-cCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeee
Q 008636 400 GGSLMLGYLKDPEATSKCM-KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478 (558)
Q Consensus 400 ~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~ 478 (558)
|++++.||+++++.+...| .+|||+|||+|+++++|.+++.||++|+||++|++|++.+||+.|.++|+|.+++|++.+
T Consensus 408 g~~~~~GY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~V~~~~v~~~~ 487 (560)
T PLN02574 408 GPGVMKGYLNNPKATQSTIDKDGWLRTGDIAYFDEDGYLYIVDRLKEIIKYKGFQIAPADLEAVLISHPEIIDAAVTAVP 487 (560)
T ss_pred CcchhhhhcCChhHhhhhccCCCCcccceEEEEECCCeEEEEecchhheEECCEEECHHHHHHHHHhCCCcceEEEEccc
Confidence 9999999999999888776 589999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHhhcccc
Q 008636 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSMSMS 554 (558)
Q Consensus 479 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~~~~~ 554 (558)
++..++.++++|+..++.. .+.+++.++++++|++++.|+.++++++||+|++||++|+.|++++.+...+
T Consensus 488 ~~~~g~~~~a~v~~~~~~~-----~~~~~l~~~~~~~l~~~~~p~~v~~v~~iP~t~~GKi~r~~L~~~~~~~~~~ 558 (560)
T PLN02574 488 DKECGEIPVAFVVRRQGST-----LSQEAVINYVAKQVAPYKKVRKVVFVQSIPKSPAGKILRRELKRSLTNSVSS 558 (560)
T ss_pred cCCCCcceEEEEEeCCCCC-----CCHHHHHHHHHHhccCcccCcEEEEeeccCCCCcchhhHHHHHHHHhhcccc
Confidence 9888899999998776544 5778999999999999999999999999999999999999999998776554
No 26
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.3e-67 Score=555.43 Aligned_cols=520 Identities=26% Similarity=0.352 Sum_probs=427.7
Q ss_pred CCCCCChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCc
Q 008636 10 NSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGA 89 (558)
Q Consensus 10 ~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 89 (558)
+..++++.++|+++++++|+++|+.+.++.+||+||.+++.++|+.|.+.|+++||+|+++++|++++++++|||+++|+
T Consensus 28 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~ 107 (573)
T PRK05605 28 DYGDTTLVDLYDNAVARFGDRPALDFFGATTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQHIVAFYAVLRLGA 107 (573)
T ss_pred CCCcCCHHHHHHHHHHHCCCCeEEEeCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCc
Confidence 44467999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCC-----------C--C
Q 008636 90 IFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSS-----------S--P 156 (558)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~--~ 156 (558)
+++|++|..+.+++..+++.++++++|++++....+.++..... ...++.+.......... . .
T Consensus 108 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (573)
T PRK05605 108 VVVEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLRRTTP----LETIVSVNMIAAMPLLQRLALRLPIPALRKAR 183 (573)
T ss_pred EEeecCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhhhccc----cceeEeeecccccccccccccccccccccccc
Confidence 99999999999999999999999999998876665555433211 22232222110000000 0 0
Q ss_pred CCCCCCCCchhhHHHhhcCCCCCC---CCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccc--cCCCC
Q 008636 157 PPRIPPADFVDTYENMLAKGDPQF---SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWV--VPKQS 231 (558)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~--~~~~~ 231 (558)
............|.++........ ........+++++++|||||||.||+|.++|+++..........+. ....+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~ 263 (573)
T PRK05605 184 AALTGPAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAWVPGLGDGPE 263 (573)
T ss_pred cccccCCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhhccccCCCCc
Confidence 000000112345555544322110 1112355789999999999999999999999998766553332221 23468
Q ss_pred EEEEecCchhhhhhh-HHHHHHHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc--cccCCCCceEEEE
Q 008636 232 VLLWTLPMFHNNGWS-FTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRPVRILT 308 (558)
Q Consensus 232 ~~~~~~p~~~~~g~~-~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~--~~~~~~~l~~v~~ 308 (558)
++++..|++|..|+. .++.++..|+++++.+..+++.+++.++++++|++.++|.+++.+.+.. ....++++|.+++
T Consensus 264 ~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~ 343 (573)
T PRK05605 264 RVLAALPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEERGVDLSGVRNAFS 343 (573)
T ss_pred EEEEecChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCEEEEchHHHHHHHHhCccccCCCchhccEEEE
Confidence 999999999998874 4666788899999988889999999999999999999999999998865 3345678999999
Q ss_pred ecCCCChhhhHHhhh-cCCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCC-Cccc
Q 008636 309 AGSPPPAPVLLRTES-LGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPET-GLSV 386 (558)
Q Consensus 309 ~g~~l~~~~~~~~~~-~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~-~~~~ 386 (558)
||+++++...+.+.+ ++.++++.||+||+++++..+.... ....+++|.+.++. .++|+|+++ +..+
T Consensus 344 gg~~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~----------~~~~~~~G~~~~~~-~~~i~d~~~~~~~~ 412 (573)
T PRK05605 344 GAMALPVSTVELWEKLTGGLLVEGYGLTETSPIIVGNPMSD----------DRRPGYVGVPFPDT-EVRIVDPEDPDETM 412 (573)
T ss_pred CCCcCCHHHHHHHHHHhCCCeecccccchhchhhhcCCccc----------CCcCCccccCCCCC-EEEEEcCCCCCccC
Confidence 999999999999884 5899999999999998766543211 12245789999998 999999865 5777
Q ss_pred CCCCCeeeEEEEecccccccccCCchhhcccccCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcC
Q 008636 387 KRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSH 466 (558)
Q Consensus 387 ~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~ 466 (558)
+.+ +.|||+++|+.++.||++++..+...|.+|||+|||+|+++++|.+++.||.||+++.+|.+|+|.+||+++..+
T Consensus 413 ~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~i~gR~dd~i~~~G~~v~p~eIE~~l~~~ 490 (573)
T PRK05605 413 PDG--EEGELLVRGPQVFKGYWNRPEETAKSFLDGWFRTGDVVVMEEDGFIRIVDRIKELIITGGFNVYPAEVEEVLREH 490 (573)
T ss_pred CCC--CeeEEEEecCchhhhhcCChhHhhhcccCCCcccCCEEEEcCCCcEEEEeccccceeeCCEEECHHHHHHHHHhC
Confidence 777 789999999999999999999999889889999999999999999999999999999999999999999999999
Q ss_pred CCcceeEEEeeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHH
Q 008636 467 PMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGD 546 (558)
Q Consensus 467 ~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~ 546 (558)
+.|.+++|++.+++..++.+++++++.++.. .+.++++++++++|+.+++|..++++++||+|.+||++|++|++
T Consensus 491 ~~i~~~~v~~~~~~~~~~~~~~~vv~~~~~~-----~~~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~L~~ 565 (573)
T PRK05605 491 PGVEDAAVVGLPREDGSEEVVAAVVLEPGAA-----LDPEGLRAYCREHLTRYKVPRRFYHVDELPRDQLGKVRRREVRE 565 (573)
T ss_pred cccceEEEEeeecccCCeEEEEEEEECCCCC-----CCHHHHHHHHHHhCccccCCcEEEEeccCCCCCcccccHHHHHH
Confidence 9999999999998888899999998877644 67789999999999999999999999999999999999999999
Q ss_pred HHhhc
Q 008636 547 IANSM 551 (558)
Q Consensus 547 ~~~~~ 551 (558)
++.+.
T Consensus 566 ~~~~~ 570 (573)
T PRK05605 566 ELLEK 570 (573)
T ss_pred HHHHH
Confidence 98654
No 27
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.8e-67 Score=550.25 Aligned_cols=516 Identities=33% Similarity=0.532 Sum_probs=444.9
Q ss_pred CCCCCChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCc
Q 008636 10 NSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGA 89 (558)
Q Consensus 10 ~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 89 (558)
...+.++.++|.++++.+|+++|+.+.++.+||+||++++.++|+.|.+.|+++|++|+++++|++++++++|||+++|+
T Consensus 2 ~~~~~~l~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~~~~~la~~~~G~ 81 (521)
T PRK06187 2 QDYPLTIGRILRHGARKHPDKEAVYFDGRRTTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEYLEAYFAVPKIGA 81 (521)
T ss_pred CcccCCHHHHHHHHHHHCCCceEEEeCCceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCe
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhH
Q 008636 90 IFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTY 169 (558)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (558)
+++++++..+.+++..+++.+++++++++.+....+.+...... ...+++...+.... ........+
T Consensus 82 ~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~----------~~~~~~~~~ 148 (521)
T PRK06187 82 VLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAILPQLP---TVRTVIVEGDGPAA----------PLAPEVGEY 148 (521)
T ss_pred EEEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHhhccC---CccEEEEecCcccc----------ccccccccH
Confidence 99999999999999999999999999999887777766654433 23345544433211 000113445
Q ss_pred HHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhhhHHH
Q 008636 170 ENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTW 249 (558)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~ 249 (558)
.++......... ......+++++++|||||||.||+|.++|+++..........++++.+++++...|++|..++...+
T Consensus 149 ~~~~~~~~~~~~-~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 227 (521)
T PRK06187 149 EELLAAASDTFD-FPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWLKLSRDDVYLVIVPMFHVHAWGLPY 227 (521)
T ss_pred HHHhhcCCccCC-CCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhhCCCCCCEEEEeCCchHHhhHHHHH
Confidence 555444333222 2235677999999999999999999999999988887777788899999999999999999998777
Q ss_pred HHHHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCcc--ccCCCCceEEEEecCCCChhhhHHhhh-cCC
Q 008636 250 GAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE--AKQLDRPVRILTAGSPPPAPVLLRTES-LGF 326 (558)
Q Consensus 250 ~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~--~~~~~~l~~v~~~g~~l~~~~~~~~~~-~~~ 326 (558)
.++..|+++++.+..++..+++.++++++|+++++|++++.+.+... ...++++|.+++||++++..+++.+.+ +++
T Consensus 228 ~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~Ge~l~~~~~~~~~~~~~~ 307 (521)
T PRK06187 228 LALMAGAKQVIPRRFDPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFVDFSSLRLVIYGGAALPPALLREFKEKFGI 307 (521)
T ss_pred HHHHhCCEEEecCCCCHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCccCcchhhEEEEcCcCCCHHHHHHHHHHhCc
Confidence 79999999999988899999999999999999999999999988773 456779999999999999999999985 499
Q ss_pred eeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEeccccccc
Q 008636 327 IVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLG 406 (558)
Q Consensus 327 ~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~g 406 (558)
++++.||+||+|+++..+....... .......++|.+.++. .++|+|+ ++.+++.+.++.|||+++|+.++.|
T Consensus 308 ~v~~~YG~tE~~~~~~~~~~~~~~~-----~~~~~~~~~G~~~~~~-~~~i~~~-~~~~~~~~~g~~Gel~v~~~~~~~~ 380 (521)
T PRK06187 308 DLVQGYGMTETSPVVSVLPPEDQLP-----GQWTKRRSAGRPLPGV-EARIVDD-DGDELPPDGGEVGEIIVRGPWLMQG 380 (521)
T ss_pred chheeeccCccCcccccCCcccccc-----cccccCCccccccCCe-EEEEECC-CCCCCCCCCCCeeEEEEECcchhhh
Confidence 9999999999988766653221100 0112456889999988 9999997 5778887434889999999999999
Q ss_pred ccCCchhhcccccCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCCCCCcee
Q 008636 407 YLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486 (558)
Q Consensus 407 y~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~ 486 (558)
|+++++.+...|.++||+|||+++++++|.+++.||.+|+++.+|.++++.+||+.|.++++|.+++|++.+++..++.+
T Consensus 381 y~~~~~~~~~~~~~~~~~tGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~ 460 (521)
T PRK06187 381 YWNRPEATAETIDGGWLHTGDVGYIDEDGYLYITDRIKDVIISGGENIYPRELEDALYGHPAVAEVAVIGVPDEKWGERP 460 (521)
T ss_pred hcCCHHHHHHHhhCCceeccceEEEcCCCCEEEeecccceEEcCCeEECHHHHHHHHHhCCCceEEEEEeccCCCcCceE
Confidence 99999998888989999999999999999999999999999999999999999999999999999999999888888999
Q ss_pred EEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHhhc
Q 008636 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSM 551 (558)
Q Consensus 487 ~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~~ 551 (558)
++++++.++.. .+.++++++++++++++.+|..++++++||+|++||++|..|+++|.+.
T Consensus 461 ~~~v~~~~~~~-----~~~~~l~~~l~~~l~~~~~p~~i~~v~~~P~t~~gK~~r~~l~~~~~~~ 520 (521)
T PRK06187 461 VAVVVLKPGAT-----LDAKELRAFLRGRLAKFKLPKRIAFVDELPRTSVGKILKRVLREQYAEG 520 (521)
T ss_pred EEEEEECCCCC-----CCHHHHHHHHHHhccCCCCceEEEEccCCCCCCCCCeeHHHHHHHHhcC
Confidence 99999877654 6788999999999999999999999999999999999999999999864
No 28
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.4e-67 Score=553.37 Aligned_cols=511 Identities=24% Similarity=0.318 Sum_probs=414.7
Q ss_pred CChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEE
Q 008636 14 LTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSS-FGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFN 92 (558)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~-~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (558)
.|+.++|++.++.+|+++|+++.++.+||+||.+++.++|+.|.+ .|+++||+|+++++|++++++++|||+++|++++
T Consensus 24 ~~~~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~la~~~~Ga~~v 103 (562)
T PRK05677 24 PNIQAVLKQSCQRFADKPAFSNLGKTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLIVV 103 (562)
T ss_pred CcHHHHHHHHHHhCCCCeeEEECCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEe
Confidence 589999999999999999999999999999999999999999997 6999999999999999999999999999999999
Q ss_pred eccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCC-----C------CCCCCCC
Q 008636 93 TINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSS-----S------SPPPRIP 161 (558)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~------~~~~~~~ 161 (558)
+++|..+.+++..+++.++++++|++.+....+.+..... ....++........... . .......
T Consensus 104 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (562)
T PRK05677 104 NTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKVLPKT----GVKHVIVTEVADMLPPLKRLLINAVVKHVKKMVPAY 179 (562)
T ss_pred ecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHhhhcc----CcceeEEecccccccchhhhhcccchhhcccccccc
Confidence 9999999999999999999999999877665554443221 12222222110000000 0 0000000
Q ss_pred CCCchhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccc--cC-CCCEEEEecC
Q 008636 162 PADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWV--VP-KQSVLLWTLP 238 (558)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~--~~-~~~~~~~~~p 238 (558)
.......+.+.+..............++++++++|||||||.||+|+++|+++..........+. +. ..+.+++.+|
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p 259 (562)
T PRK05677 180 HLPQAVKFNDALAKGAGQPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSNLNEGCEILIAPLP 259 (562)
T ss_pred CCcccccHHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhccCCCCCccEEEEcCc
Confidence 00111233444333222111122346789999999999999999999999998766554433332 33 3468899999
Q ss_pred chhhhhhh-HHHHHHHhcceEEEec-CCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc--cccCCCCceEEEEecCCCC
Q 008636 239 MFHNNGWS-FTWGAAVVGATNVCLR-KFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRPVRILTAGSPPP 314 (558)
Q Consensus 239 ~~~~~g~~-~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~--~~~~~~~l~~v~~~g~~l~ 314 (558)
++|..++. .++..+..|++.++.+ ..++..+++.++++++|+++++|+++..+.+.. ....++++|.+++||++++
T Consensus 260 l~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~v~~gG~~~~ 339 (562)
T PRK05677 260 LYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAFRKLDFSALKLTLSGGMALQ 339 (562)
T ss_pred HHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhCcccccCChhhceEEEEcCccCC
Confidence 99999884 4566777788776665 468999999999999999999999999998765 2334568999999999999
Q ss_pred hhhhHHhhh-cCCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCee
Q 008636 315 APVLLRTES-LGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTR 393 (558)
Q Consensus 315 ~~~~~~~~~-~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~ 393 (558)
+++.+.+.+ +++++++.||+||+++++..+... ....+++|.+.++. +++|+|+ ++..++.| +.
T Consensus 340 ~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~-----------~~~~~~vG~~~~~~-~v~i~d~-~~~~~~~g--~~ 404 (562)
T PRK05677 340 LATAERWKEVTGCAICEGYGMTETSPVVSVNPSQ-----------AIQVGTIGIPVPST-LCKVIDD-DGNELPLG--EV 404 (562)
T ss_pred HHHHHHHHHHcCCCeeccCCccccCcceeecCcc-----------CCCCCccCccCCCC-EEEEECC-CCCCCCCC--CC
Confidence 999999884 589999999999998766543311 11235799999998 9999997 67888888 78
Q ss_pred eEEEEecccccccccCCchhhcccc-cCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCccee
Q 008636 394 GEIVMRGGSLMLGYLKDPEATSKCM-KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEA 472 (558)
Q Consensus 394 Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~ 472 (558)
|||+++|+.++.||+++++.+...| .+|||+|||+|+++++|.+++.||++|+|+.+|.+|+|.+||+.|.++++|.++
T Consensus 405 Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~i~p~eiE~~l~~~~~v~~~ 484 (562)
T PRK05677 405 GELCVKGPQVMKGYWQRPEATDEILDSDGWLKTGDIALIQEDGYMRIVDRKKDMILVSGFNVYPNELEDVLAALPGVLQC 484 (562)
T ss_pred eEEEEecCccchhhcCCchhhhhccCCCCcccccceEEECCCCcEEEEecCcCeEEeCCEEECHHHHHHHHHhCCCccEE
Confidence 9999999999999999999988888 489999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHH
Q 008636 473 AVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIA 548 (558)
Q Consensus 473 ~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~ 548 (558)
+|++++++..++.+++++++.++.. .+.+++++++++.++++++|..++++++||+|++||++|++|++.+
T Consensus 485 ~v~g~~~~~~g~~~~~~v~~~~~~~-----~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~sGKi~r~~L~~~~ 555 (562)
T PRK05677 485 AAIGVPDEKSGEAIKVFVVVKPGET-----LTKEQVMEHMRANLTGYKVPKAVEFRDELPTTNVGKILRRELRDEE 555 (562)
T ss_pred EEEeccCccCCceEEEEEEeCCCCC-----CCHHHHHHHHHHhhhhccCCcEEEEeccCCCCCcccccHHHHHHHH
Confidence 9999999888889999988776543 6778999999999999999999999999999999999999999864
No 29
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.3e-67 Score=549.60 Aligned_cols=504 Identities=33% Similarity=0.499 Sum_probs=431.4
Q ss_pred CCCChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEE
Q 008636 12 CPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIF 91 (558)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 91 (558)
..+++.+.|++.++.+|+++|+.+.++++||+||.+.+.++|..|.+.|+++||+|+++++|++++++++|||+++|+++
T Consensus 3 ~~~~i~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~la~~~~G~~~ 82 (513)
T PRK07656 3 EWMTLPELLARAARRFGDKEAYVFGDQRLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWVIAALGALKAGAVV 82 (513)
T ss_pred ccccHHHHHHHHHHHCCCCeEEEeCCCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEE
Confidence 34789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhHHH
Q 008636 92 NTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYEN 171 (558)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (558)
+++++..+.+.+..+++.+++++++++++............. ....++......... . ......|.+
T Consensus 83 v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-------~---~~~~~~~~~ 149 (513)
T PRK07656 83 VPLNTRYTADEAAYILARGDAKALFVLGLFLGVDYSATTRLP---ALEHVVICETEEDDP-------H---TEKMKTFTD 149 (513)
T ss_pred EecCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHHHhccC---CccEEEEEcCccccc-------C---ccccccHHH
Confidence 999999999999999999999999998877666555433222 123333332221110 0 001244555
Q ss_pred hhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhhh-HHHH
Q 008636 172 MLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWS-FTWG 250 (558)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~-~~~~ 250 (558)
+...... .....+..++++++++|||||||.||+|.++|.++..........++++.++++++..|++|.+++. .++.
T Consensus 150 ~~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (513)
T PRK07656 150 FLAAGDP-AERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYLGLTEGDRYLAANPFFHVFGYKAGVNA 228 (513)
T ss_pred HHhcCCC-CCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhhCCCCCCeEEEccchHHHHHHHHHHHH
Confidence 5543322 1122345778999999999999999999999999988777777778899999999999999999874 5788
Q ss_pred HHHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCcc--ccCCCCceEEEEecCCCChhhhHHhh-hcCC-
Q 008636 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE--AKQLDRPVRILTAGSPPPAPVLLRTE-SLGF- 326 (558)
Q Consensus 251 ~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~--~~~~~~l~~v~~~g~~l~~~~~~~~~-~~~~- 326 (558)
++..|+++++.+..++..+++.++++++|++.++|+++..+.+... ...++++|.+++||+++++.+.+.+. .++.
T Consensus 229 ~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~ 308 (513)
T PRK07656 229 PLMRGATILPLPVFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRSAEDLSSLRLAVTGAASMPVALLERFESELGVD 308 (513)
T ss_pred HHHcCceEEecCcCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcCCCCccceeeEEecCCCCCHHHHHHHHHHcCCC
Confidence 8999999999888899999999999999999999999999988763 33677999999999999999999988 5688
Q ss_pred eeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEeccccccc
Q 008636 327 IVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLG 406 (558)
Q Consensus 327 ~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~g 406 (558)
.+++.||+||+++++..+...... .....++|.+.++. .++|+|+ ++.+++.+ +.|||+++|+.++.|
T Consensus 309 ~~~~~YG~tE~~~~~~~~~~~~~~--------~~~~~~vG~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~g 376 (513)
T PRK07656 309 IVLTGYGLSEASGVTTFNRLDDDR--------KTVAGTIGTAIAGV-ENKIVNE-LGEEVPVG--EVGELLVRGPNVMKG 376 (513)
T ss_pred ceEeEEccccCCCceeecCccccc--------cccCCCccccCCCc-EEEEECC-CCCCCCCC--CceEEEEEcchhhhh
Confidence 899999999998888766532211 11245799999998 9999997 68888877 789999999999999
Q ss_pred ccCCchhhccccc-CCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCCCCCce
Q 008636 407 YLKDPEATSKCMK-DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEI 485 (558)
Q Consensus 407 y~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~ 485 (558)
|++++..+...+. +|||+|||+|+++++|.+++.||.+|+|+.+|.++++.+||+.|.++++|.+++|++.+++..|+.
T Consensus 377 y~~~~~~~~~~~~~~~~~~tGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~ 456 (513)
T PRK07656 377 YYDDPEATAAAIDADGWLHTGDLGRLDEEGYLYIVDRKKDMFIVGGFNVYPAEVEEVLYEHPAVAEAAVIGVPDERLGEV 456 (513)
T ss_pred hcCCHHHHhhhhccCCceeccceEEEcCCeeEEEEecccceEEeCCEEeCHHHHHHHHHhCCCeeEEEEEecCCcccCce
Confidence 9999988887775 899999999999999999999999999999999999999999999999999999999998888899
Q ss_pred eEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHH
Q 008636 486 PCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGD 546 (558)
Q Consensus 486 ~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~ 546 (558)
++++++..++.. .+.+++.+++++.|+++++|..++++++||+|++||++|++|++
T Consensus 457 ~~~~v~~~~~~~-----~~~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~gK~~r~~l~~ 512 (513)
T PRK07656 457 GKAYVVLKPGAE-----LTEEELIAYCREHLAKYKVPRSIEFLDELPKNATGKVLKRALRE 512 (513)
T ss_pred EEEEEEECCCCC-----CCHHHHHHHHHhhcccccCCCEEEEecCCCCCCccceeHHHHhc
Confidence 999998876443 67889999999999999999999999999999999999999975
No 30
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.8e-67 Score=549.63 Aligned_cols=533 Identities=51% Similarity=0.885 Sum_probs=434.7
Q ss_pred CCCCCCCCCCCChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHH
Q 008636 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFA 83 (558)
Q Consensus 4 ~~~~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA 83 (558)
+..+.....++++.++|++.++.+|+++|+.+.+..+||+||.+++.++|.+|.+.|+++||+|+++++|++++++++||
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA 87 (545)
T PRK08162 8 LDRNAANYVPLTPLSFLERAAEVYPDRPAVIHGDRRRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVEAHFG 87 (545)
T ss_pred cCccccccccCCHHHHHHHHHHHCCCCeEEEECCeEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHH
Confidence 44556667789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCcEEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCC
Q 008636 84 VPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPA 163 (558)
Q Consensus 84 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (558)
|+++|++++|++++.+.+.+..+++.+++++++++.+....+.+...... ....+.+........ ... .
T Consensus 88 ~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~---~~~----~ 156 (545)
T PRK08162 88 VPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREALALLP----GPKPLVIDVDDPEYP---GGR----F 156 (545)
T ss_pred HHHhCcEEeccccccChHHHHHHHHhCCCeEEEEccchhhHHHHHHhhCC----CCceEEEecCccccc---cCC----C
Confidence 99999999999999999999999999999999999887776665543322 122233322111000 000 0
Q ss_pred CchhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhh
Q 008636 164 DFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243 (558)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 243 (558)
-....+.++.....+......+...+++++++|||||||.||+|+++|+++..........+.+..++++++.+|++|..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~ 236 (545)
T PRK08162 157 IGALDYEAFLASGDPDFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAWGMPKHPVYLWTLPMFHCN 236 (545)
T ss_pred cccccHHHHhccCCccccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeeEeccCcHhhh
Confidence 01234555554433333322234456899999999999999999999998866665555556677889999999999999
Q ss_pred hhhHHHHHHHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCcc--ccCCCCceEEEEecCCCChhhhHHh
Q 008636 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE--AKQLDRPVRILTAGSPPPAPVLLRT 321 (558)
Q Consensus 244 g~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~--~~~~~~l~~v~~~g~~l~~~~~~~~ 321 (558)
++...+...+.|++.++...+++..+++.++++++|++.++|++++.|++... ...+.+.+.++++|+.++..+.+.+
T Consensus 237 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 316 (545)
T PRK08162 237 GWCFPWTVAARAGTNVCLRKVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEWRAGIDHPVHAMVAGAAPPAAVIAKM 316 (545)
T ss_pred hHHHHHHHHHHccEEEEeCCCCHHHHHHHHHHcCCeEEEechHHHHHHHhCccccccCCccceEEEECCCCCCHHHHHHH
Confidence 98666555667777777778899999999999999999999999999987652 2344567788899999999999988
Q ss_pred hhcCCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecc
Q 008636 322 ESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGG 401 (558)
Q Consensus 322 ~~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~ 401 (558)
++.++++++.||+||+++.+..+.....+..++.........+.|.+.+....++|+|++++.+++.++++.|||+++|+
T Consensus 317 ~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~g~~~Gel~v~g~ 396 (545)
T PRK08162 317 EEIGFDLTHVYGLTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDPDTMQPVPADGETIGEIMFRGN 396 (545)
T ss_pred HHhCCceeecccccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcCCCCcccCCCCCceeEEEEecC
Confidence 87799999999999997666655433333322222122223456666554446889997788888776556799999999
Q ss_pred cccccccCCchhhcccccCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCCC
Q 008636 402 SLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481 (558)
Q Consensus 402 ~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~ 481 (558)
.++.||+++++.+...|.+|||+|||+|++|++|.+++.||.+|+++.+|.+|+|.+||+.|.++|+|.+++|++.+++.
T Consensus 397 ~~~~gY~~~~~~~~~~~~~g~~~TGDl~~~d~dg~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~ 476 (545)
T PRK08162 397 IVMKGYLKNPKATEEAFAGGWFHTGDLAVLHPDGYIKIKDRSKDIIISGGENISSIEVEDVLYRHPAVLVAAVVAKPDPK 476 (545)
T ss_pred cchhhhcCChhhhHHHhhCCCcccCceEEEcCCccEEEEecccceEEeCCEEECHHHHHHHHHhCCcccEEEEEeeeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred CCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHhhccc
Q 008636 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSMSM 553 (558)
Q Consensus 482 ~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~~~~ 553 (558)
.++.+++++++.++.. .+.+++++++++.++.+++|..+++ ++||+|++||++|+.|++.++++..
T Consensus 477 ~~~~~~~~v~~~~~~~-----~~~~~l~~~~~~~l~~~~~P~~~~~-~~iP~t~~gK~~r~~l~~~~~~l~~ 542 (545)
T PRK08162 477 WGEVPCAFVELKDGAS-----ATEEEIIAHCREHLAGFKVPKAVVF-GELPKTSTGKIQKFVLREQAKSLKA 542 (545)
T ss_pred cCceEEEEEEeCCCCC-----CCHHHHHHHHHHhcccccCCcEEEe-cccCCCCCcCCcHHHHHHHHhhhhh
Confidence 8889999998877644 5778999999999999999998875 6899999999999999999887653
No 31
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.3e-67 Score=556.30 Aligned_cols=504 Identities=24% Similarity=0.352 Sum_probs=418.5
Q ss_pred CChh-hHHHHHhh-cCCCCceEEECC----ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhc
Q 008636 14 LTPL-GFIERAAT-ACDDCPSIIYND----TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMS 87 (558)
Q Consensus 14 ~tl~-~~l~~~a~-~~p~~~a~~~~~----~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~ 87 (558)
.++. +++++++. .+|+++|+.+.+ +.+||+||.+++.++|.+|.+.|+++||+|+++++|++++++++|||+++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~ 121 (570)
T PRK04319 42 VNIAYEAIDRHADGGRKDKVALRYLDASRKEKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPELYFALLGALKN 121 (570)
T ss_pred eeHHHHHHHHhhccCCCCceEEEEECCCCceeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence 3444 67888876 479999998743 68999999999999999999999999999999999999999999999999
Q ss_pred CcEEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchh
Q 008636 88 GAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVD 167 (558)
Q Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (558)
|++++|+++.++.+++.++++.++++++|++......... ... .....++.+...... .....
T Consensus 122 G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~------------~~~~~ 184 (570)
T PRK04319 122 GAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPA--DDL---PSLKHVLLVGEDVEE------------GPGTL 184 (570)
T ss_pred CcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccch--hcC---CCceEEEEECCCcCC------------CcCcc
Confidence 9999999999999999999999999999998765433221 011 112334443322100 00123
Q ss_pred hHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhh-h
Q 008636 168 TYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGW-S 246 (558)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~-~ 246 (558)
.+.+++........ ..+..++++++++|||||||.||+|.++|+++..........+.+.++|++++..|++|..|+ .
T Consensus 185 ~~~~~~~~~~~~~~-~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~ 263 (570)
T PRK04319 185 DFNALMEQASDEFD-IEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVLDLHEDDVYWCTADPGWVTGTSY 263 (570)
T ss_pred CHHHHHhhcCCcCC-ccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcCCCCCceEEecCChHHhhCchH
Confidence 44444443322211 223467899999999999999999999999998777766667788899999999999998886 5
Q ss_pred HHHHHHHhcceEEEec-CCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc----cccCCCCceEEEEecCCCChhhhHHh
Q 008636 247 FTWGAAVVGATNVCLR-KFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP----EAKQLDRPVRILTAGSPPPAPVLLRT 321 (558)
Q Consensus 247 ~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~----~~~~~~~l~~v~~~g~~l~~~~~~~~ 321 (558)
.++.++..|+++++.. .+++..+++.++++++|++.++|++++.|.+.. ....++++|.++++|+++++++.+++
T Consensus 264 ~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~ 343 (570)
T PRK04319 264 GIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYDLSSLRHILSVGEPLNPEVVRWG 343 (570)
T ss_pred HHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCCcccceEEEEcccCCCHHHHHHH
Confidence 6888999999998876 579999999999999999999999999998754 23457799999999999999999988
Q ss_pred hh-cCCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEec
Q 008636 322 ES-LGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRG 400 (558)
Q Consensus 322 ~~-~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~ 400 (558)
.+ ++.++++.||+||+++++...... .....+++|.|.+++ +++|+|+ ++..++.| +.|||+++|
T Consensus 344 ~~~~g~~i~~~YG~tE~~~~~~~~~~~----------~~~~~~~~G~p~~g~-~~~i~d~-~~~~~~~g--~~Gel~i~~ 409 (570)
T PRK04319 344 MKVFGLPIHDNWWMTETGGIMIANYPA----------MDIKPGSMGKPLPGI-EAAIVDD-QGNELPPN--RMGNLAIKK 409 (570)
T ss_pred HHHhCCCeEeceeecccCCEEEecCCC----------CCCCCCcCcCCCCCC-EEEEECC-CCCCCCCC--CceEEEEcC
Confidence 84 689999999999998765432211 012345799999998 9999997 67777777 889999997
Q ss_pred --ccccccccCCchhhcccccCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeee
Q 008636 401 --GSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478 (558)
Q Consensus 401 --~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~ 478 (558)
++++.||+++++.+...|.+|||+|||+++++++|.+++.||++|+|+.+|++|+|.+||+.|.++|.|.+++|++.+
T Consensus 410 ~~~~~~~GY~~~~~~~~~~~~~gw~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~i~p~eIE~~l~~~~~V~~~~v~g~~ 489 (570)
T PRK04319 410 GWPSMMRGIWNNPEKYESYFAGDWYVSGDSAYMDEDGYFWFQGRVDDVIKTSGERVGPFEVESKLMEHPAVAEAGVIGKP 489 (570)
T ss_pred CCChHHhHhcCCHHHhhhhhcCCceEeCcEEEECCCeeEEEEecCCCEEEECCEEECHHHHHHHHhhCCCeeecceeccc
Confidence 899999999999999989899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHhhc
Q 008636 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSM 551 (558)
Q Consensus 479 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~~ 551 (558)
++..|+.+++++++.++.... ....+++.++++++|+.|++|+.++++++||+|++||++|++|+++..++
T Consensus 490 ~~~~g~~~~a~v~~~~~~~~~--~~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKv~r~~L~~~~~~~ 560 (570)
T PRK04319 490 DPVRGEIIKAFVALRPGYEPS--EELKEEIRGFVKKGLGAHAAPREIEFKDKLPKTRSGKIMRRVLKAWELGL 560 (570)
T ss_pred CcCCceEEEEEEEECCCCCCC--HHHHHHHHHHHHHhcccccCCcEEEEeCCCCCCCchhhhHHHHHHHHhCC
Confidence 998899999999987764311 02346899999999999999999999999999999999999999997654
No 32
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.5e-67 Score=549.50 Aligned_cols=508 Identities=30% Similarity=0.439 Sum_probs=434.5
Q ss_pred CCChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEE
Q 008636 13 PLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFN 92 (558)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (558)
..|+.++|.++++.+|+++|+.+.++.+||+||.+.+.++|..|.+.|+++||+|+++++|++++++++|||+++|++++
T Consensus 10 ~~~l~~~l~~~a~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~~~~~a~~~~G~~~v 89 (523)
T PRK08316 10 RQTIGDILRRSARRYPDKTALVFGDRSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYALLWLACARAGAVHV 89 (523)
T ss_pred CCCHHHHHHHHHHHCCCCeEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEE
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhHHHh
Q 008636 93 TINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENM 172 (558)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (558)
|+++..+.+++..+++.+++++++++.+....+.+...... ...+....... . .........+.++
T Consensus 90 ~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~---------~~~~~~~~~~~~~ 155 (523)
T PRK08316 90 PVNFMLTGEELAYILDHSGARAFLVDPALAPTAEAALALLP----VDTLILSLVLG-G---------REAPGGWLDFADW 155 (523)
T ss_pred ecccccCHHHHHHHHHhCCCCEEEEccchHHHHHHHhhhcC----ccceeeeeccc-c---------cccccchhhHHHH
Confidence 99999999999999999999999999887776665443322 11111110000 0 0001113444444
Q ss_pred hcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhhhH-HHHH
Q 008636 173 LAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSF-TWGA 251 (558)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~~~ 251 (558)
....... ........+++++++|||||||.||+|.++|+++..........+++..+++++..+|++|..++.. ++.+
T Consensus 156 ~~~~~~~-~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~ 234 (523)
T PRK08316 156 AEAGSVA-EPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAGDMSADDIPLHALPLYHCAQLDVFLGPY 234 (523)
T ss_pred HhcCCCc-cCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCCceEEEccCCchhhhHHHHHHHH
Confidence 4332221 1223456789999999999999999999999999887777777778999999999999999998854 5567
Q ss_pred HHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc--cccCCCCceEEEEecCCCChhhhHHhhh-c-CCe
Q 008636 252 AVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRPVRILTAGSPPPAPVLLRTES-L-GFI 327 (558)
Q Consensus 252 l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~--~~~~~~~l~~v~~~g~~l~~~~~~~~~~-~-~~~ 327 (558)
+..|+++++.+..+++.+++.++++++|++.++|+++..+.+.. ....+++++.+++||+.++..+...+++ + +.+
T Consensus 235 ~~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~ 314 (523)
T PRK08316 235 LYVGATNVILDAPDPELILRTIEAERITSFFAPPTVWISLLRHPDFDTRDLSSLRKGYYGASIMPVEVLKELRERLPGLR 314 (523)
T ss_pred HhcCceEEEecCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcccccCCcccceEEEEcCCcCCHHHHHHHHHHcCCCc
Confidence 88899999998889999999999999999999999999998875 3446779999999999999999999985 4 789
Q ss_pred eeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecccccccc
Q 008636 328 VSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGY 407 (558)
Q Consensus 328 v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy 407 (558)
+++.||+||++.++..+... .......++|.+.++. +++|.|+ ++.+++.+ +.|||+++|+.++.||
T Consensus 315 ~~~~YG~tE~~~~~~~~~~~---------~~~~~~~~~G~~~~~~-~~~i~~~-~~~~~~~g--~~Gei~v~~~~~~~~y 381 (523)
T PRK08316 315 FYNCYGQTEIAPLATVLGPE---------EHLRRPGSAGRPVLNV-ETRVVDD-DGNDVAPG--EVGEIVHRSPQLMLGY 381 (523)
T ss_pred eeeeecccccCccccccCcc---------ccccccCCcccCCCCc-EEEEEcC-CCCCCCCC--CcceEEEECCchhhhh
Confidence 99999999999876654321 1122346789999998 9999996 67888887 7899999999999999
Q ss_pred cCCchhhcccccCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCCCCCceeE
Q 008636 408 LKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPC 487 (558)
Q Consensus 408 ~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~ 487 (558)
+++++.+...|.+|||+|||+|++++||.+++.||++|+|+.+|.+|+|.+||+.|.++++|.+++|++.+++..++.++
T Consensus 382 ~~~~~~~~~~~~~~~~~TGDl~~~~~~g~l~i~gR~~~~i~~~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~ 461 (523)
T PRK08316 382 WDDPEKTAEAFRGGWFHSGDLGVMDEEGYITVVDRKKDMIKTGGENVASREVEEALYTHPAVAEVAVIGLPDPKWIEAVT 461 (523)
T ss_pred cCCHHHHHHHhhCCCeeccceEEEcCCceEEEecccccEEEeCCeEECHHHHHHHHHhCCChheEeEecccCcccCCeEE
Confidence 99999998889999999999999999999999999999999999999999999999999999999999999998899999
Q ss_pred EEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHhhccc
Q 008636 488 AFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSMSM 553 (558)
Q Consensus 488 ~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~~~~ 553 (558)
+++++.++.. ...+++.++++++++++++|..+++++++|+|++||++|++|+++|.+.+.
T Consensus 462 ~~v~~~~~~~-----~~~~~l~~~~~~~l~~~~~p~~i~~v~~~p~t~~gKi~r~~l~~~~~~~~~ 522 (523)
T PRK08316 462 AVVVPKAGAT-----VTEDELIAHCRARLAGFKVPKRVIFVDELPRNPSGKILKRELRERYAGAFT 522 (523)
T ss_pred EEEEECCCCC-----CCHHHHHHHHHHhcccCCCCcEEEEecCCCCCCccceeHHHHHHHHHhhcc
Confidence 9999876644 577889999999999999999999999999999999999999999987754
No 33
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.8e-67 Score=545.74 Aligned_cols=481 Identities=20% Similarity=0.325 Sum_probs=413.0
Q ss_pred CChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEe
Q 008636 14 LTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNT 93 (558)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 93 (558)
|++.+.|+++++++|+++|+.+.++++||+||.+++.++|.+|.+.|. +|++|+|+++|++++++++|||+++|++++|
T Consensus 1 ~~~~~~~~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~-~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~ 79 (487)
T PRK07638 1 MGITKEYKKHASLQPNKIAIKENDRVLTYKDWFESVCKVANWLNEKES-KNKTIAILLENRIEFLQLFAGAAMAGWTCVP 79 (487)
T ss_pred CChHHHHHHHHHhCCCCeEEecCCcEeeHHHHHHHHHHHHHHHHHhCC-CCCEEEEEcCCCHHHHHHHHHHHHcCeEEEe
Confidence 689999999999999999999999999999999999999999999985 8999999999999999999999999999999
Q ss_pred ccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhHHHhh
Q 008636 94 INTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENML 173 (558)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (558)
+++.++.+++..+++.++++++|++......+... ...++.... +.+..
T Consensus 80 l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~---------~~~~~~~~~----------------------~~~~~ 128 (487)
T PRK07638 80 LDIKWKQDELKERLAISNADMIVTERYKLNDLPDE---------EGRVIEIDE----------------------WKRMI 128 (487)
T ss_pred cCccCCHHHHHHHHHhCCCCEEEEecccccchhhc---------cceEEEehh----------------------hhhhh
Confidence 99999999999999999999999987654333210 112222211 11111
Q ss_pred cCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhhhHHHHHHH
Q 008636 174 AKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAV 253 (558)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~ 253 (558)
....... .......+++++|+|||||||.||+|.++|+++..........+++..+|+++...|++|..++..++.++.
T Consensus 129 ~~~~~~~-~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~ 207 (487)
T PRK07638 129 EKYLPTY-APIENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVHDFHMKREDSVLIAGTLVHSLFLYGAISTLY 207 (487)
T ss_pred hhccccc-cccccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCcCCCCEEEEeecchHHHHHHHHHHHHc
Confidence 1111110 011133567899999999999999999999999887777777778899999999999999888888888999
Q ss_pred hcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCccccCCCCceEEEEecCCCChhhhHHhhh-c-CCeeeec
Q 008636 254 VGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAGSPPPAPVLLRTES-L-GFIVSHG 331 (558)
Q Consensus 254 ~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~~l~~v~~~g~~l~~~~~~~~~~-~-~~~v~~~ 331 (558)
.|+++++.+.+++..+++.++++++|++.++|+++..|.+.. ....+.+.++++|+.++.+...++.+ + +..+++.
T Consensus 208 ~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~--~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~ 285 (487)
T PRK07638 208 VGQTVHLMRKFIPNQVLDKLETENISVMYTVPTMLESLYKEN--RVIENKMKIISSGAKWEAEAKEKIKNIFPYAKLYEF 285 (487)
T ss_pred cCcEEEEcCCCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCc--CcCCceeEEEEcCCCCCHHHHHHHHHHcCCCeEEEE
Confidence 999999998899999999999999999999999999998763 23456777889999999999999885 4 7899999
Q ss_pred ccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecccccccccCCc
Q 008636 332 YGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDP 411 (558)
Q Consensus 332 YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~ 411 (558)
||+||++.++..+.. .......++|.|.++. .++|+|+ ++.+++++ +.|||+++|+.++.||++++
T Consensus 286 YG~tE~~~~~~~~~~----------~~~~~~~~~G~~~~~~-~~~i~d~-~g~~~~~g--~~Gel~v~~~~~~~gy~~~~ 351 (487)
T PRK07638 286 YGASELSFVTALVDE----------ESERRPNSVGRPFHNV-QVRICNE-AGEEVQKG--EIGTVYVKSPQFFMGYIIGG 351 (487)
T ss_pred ecCCccCceEEeccc----------ccCCCCCCCCcccCCc-EEEEECC-CCCCCCCC--CCeEEEEecccceeeecCCH
Confidence 999999877654331 1123345889999998 9999997 68888887 78999999999999999999
Q ss_pred hhhcccccCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCCCCCceeEEEEE
Q 008636 412 EATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVS 491 (558)
Q Consensus 412 ~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~ 491 (558)
+.+...+.+|||+|||+|++|++|.+++.||++|+|+.+|.+|+|.+||+.|.++|+|.+++|++.+++..|+.+++++.
T Consensus 352 ~~~~~~~~~g~~~TGDl~~~d~~g~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~ 431 (487)
T PRK07638 352 VLARELNADGWMTVRDVGYEDEEGFIYIVGREKNMILFGGINIFPEEIESVLHEHPAVDEIVVIGVPDSYWGEKPVAIIK 431 (487)
T ss_pred HHHhhhccCCcEecCccEeEcCCCeEEEEecCCCeEEeCCEEECHHHHHHHHHhCCCeeeEEEEecCchhcCCeeEEEEE
Confidence 88877778999999999999999999999999999999999999999999999999999999999999988888888876
Q ss_pred ecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHhhcc
Q 008636 492 LKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSMS 552 (558)
Q Consensus 492 ~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~~~ 552 (558)
. . ...+++++++++.++++++|..++++++||+|++||++|++|++++.+..
T Consensus 432 ~----~-----~~~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~GKv~r~~L~~~~~~~~ 483 (487)
T PRK07638 432 G----S-----ATKQQLKSFCLQRLSSFKIPKEWHFVDEIPYTNSGKIARMEAKSWIENQE 483 (487)
T ss_pred C----C-----CCHHHHHHHHHHHhhcccCCcEEEEecccCCCCcccccHHHHHHHHhccc
Confidence 3 1 57789999999999999999999999999999999999999999988754
No 34
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6e-67 Score=547.48 Aligned_cols=524 Identities=30% Similarity=0.479 Sum_probs=428.9
Q ss_pred CCCCCCChhhHHHHHhhcCCCCceEEEC--C--ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHH
Q 008636 9 ANSCPLTPLGFIERAATACDDCPSIIYN--D--TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAV 84 (558)
Q Consensus 9 ~~~~~~tl~~~l~~~a~~~p~~~a~~~~--~--~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~ 84 (558)
+.+.+.++.++|++.++.+|++.++.+. + +.+||.||.++++++|.+|.+.|+++||+|+++++|++++++++|||
T Consensus 5 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~~~~la~ 84 (539)
T PRK07008 5 MMDMPLLISSLIAHAARHAGDTEIVSRRVEGDIHRYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHLEAYYGV 84 (539)
T ss_pred cccCCCCHHHHHHHHHhhCCCceEEEeeccCcceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHH
Confidence 3445568999999999999999888752 2 58999999999999999999999999999999999999999999999
Q ss_pred hhcCcEEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCC
Q 008636 85 PMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPAD 164 (558)
Q Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (558)
+++|+++++++|..+.+++..+++.+++++++++.+..+.+.+...... ....++......... .. ..
T Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~------~~--~~- 152 (539)
T PRK07008 85 SGSGAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDALAPQCP---NVKGWVAMTDAAHLP------AG--ST- 152 (539)
T ss_pred HhcCcEEeecccccCHHHHHHHHhccCCcEEEEcchhHHHHHHHHhhCC---CceEEEEEccCCccc------cC--Cc-
Confidence 9999999999999999999999999999999999877666655543322 122333332221110 00 00
Q ss_pred chhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHH--HhcccccccCCCCEEEEecCchhh
Q 008636 165 FVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIA--VDSLIDWVVPKQSVLLWTLPMFHN 242 (558)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~ 242 (558)
....++++.......... ....++++++++|||||||.||+|.+||+++.... ......+++..+|+++...|++|.
T Consensus 153 ~~~~~~~l~~~~~~~~~~-~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~ 231 (539)
T PRK07008 153 PLLCYETLVGAQDGDYDW-PRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAMGLSARDAVLPVVPMFHV 231 (539)
T ss_pred ccccHHHHhcccCCCcCc-ccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhcccccCCCCCceEEecCchHHh
Confidence 134455554433222211 23456889999999999999999999999986432 233346678889999999999998
Q ss_pred hhhhHHHHHHHhcceEEEec-CCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc--cccCCCCceEEEEecCCCChhhhH
Q 008636 243 NGWSFTWGAAVVGATNVCLR-KFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRPVRILTAGSPPPAPVLL 319 (558)
Q Consensus 243 ~g~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~--~~~~~~~l~~v~~~g~~l~~~~~~ 319 (558)
.++...+.++..|+++++.+ .++++.+++.++++++|++.++|+++..+++.. ....+++++.++++|+++++.++.
T Consensus 232 ~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~ 311 (539)
T PRK07008 232 NAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREAGLRFSTLRRTVIGGSACPPAMIR 311 (539)
T ss_pred hhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHH
Confidence 88877788889999998875 578999999999999999999999999998765 334577999999999999999999
Q ss_pred Hhh-hcCCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEE
Q 008636 320 RTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVM 398 (558)
Q Consensus 320 ~~~-~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v 398 (558)
++. .+++++++.||+||++..+..+.........+.........++|.|.+++ .++|+|+ ++..++.++.+.|||++
T Consensus 312 ~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~-~~~i~d~-~~~~~~~~~~~~Gei~v 389 (539)
T PRK07008 312 TFEDEYGVEVIHAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGV-DMKIVGD-DGRELPWDGKAFGDLQV 389 (539)
T ss_pred HHHHHhCCceecccccccccccceecccccccccCCchhhhhhcccCCccccce-EEEEECC-CCCccCCCCCcceEEEE
Confidence 997 56999999999999997665543221111111111122345789999998 9999997 67778776556799999
Q ss_pred ecccccccccCCchhhcccccCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeee
Q 008636 399 RGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478 (558)
Q Consensus 399 ~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~ 478 (558)
+|+.++.||++++. ..+.+|||+|||++++++||.+++.||++|+|+.+|.+|+|.+||+.|..+|.|.++++++.+
T Consensus 390 ~g~~~~~gy~~~~~---~~~~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~v~~~~v~~~~ 466 (539)
T PRK07008 390 RGPWVIDRYFRGDA---SPLVDGWFPTGDVATIDADGFMQITDRSKDVIKSGGEWISSIDIENVAVAHPAVAEAACIACA 466 (539)
T ss_pred eCCccchhhcCChh---hhhcCCCcccCceEEEcCCCcEEEeecccCEEEeCCeEEcHHHHHHHHHhCCceeEEEEEecC
Confidence 99999999999884 234589999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHhhccccc
Q 008636 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSMSMSH 555 (558)
Q Consensus 479 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~~~~~~ 555 (558)
++..++.++++|+..++.. .+.++++++++++++++++|..++++++||+|++||++|++|+++++++.++.
T Consensus 467 ~~~~~~~~~~~v~~~~~~~-----~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~sgKi~r~~l~~~~~~~~~~~ 538 (539)
T PRK07008 467 HPKWDERPLLVVVKRPGAE-----VTREELLAFYEGKVAKWWIPDDVVFVDAIPHTATGKLQKLKLREQFRDYVLPT 538 (539)
T ss_pred CchhccceEEEEEeCCCCc-----cCHHHHHHHHHhhcccccCCeEEEEecCCCCCCccceeHHHHHHHHHhhcccC
Confidence 8888888999888766543 57789999999999999999999999999999999999999999999988764
No 35
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.6e-67 Score=560.09 Aligned_cols=515 Identities=23% Similarity=0.288 Sum_probs=411.3
Q ss_pred hhHHHHHhhcCCCCceEEEC------CccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcE
Q 008636 17 LGFIERAATACDDCPSIIYN------DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAI 90 (558)
Q Consensus 17 ~~~l~~~a~~~p~~~a~~~~------~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (558)
.++|++++..+|+++|+++. .+.+||+||.+++.++|++|+++|+++||+|+++++|++++++++|||+++|++
T Consensus 56 ~~~l~~~~~~~p~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav 135 (629)
T PRK10524 56 HNAVDRHLAKRPEQLALIAVSTETDEERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAAFAMLACARIGAI 135 (629)
T ss_pred HHHHHHhhccCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcE
Confidence 56788888889999999872 368999999999999999999999999999999999999999999999999999
Q ss_pred EEeccccCChHHHHHHHhhcCccEEEEeCcC---------hHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCC
Q 008636 91 FNTINTRLDARTISIILKHSESKLVFVDHLS---------SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIP 161 (558)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (558)
++++++.++.+.+..+++.++++++|+++.. .+.+.++...... ....++.+....... ....
T Consensus 136 ~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~vi~~~~~~~~~---~~~~--- 207 (629)
T PRK10524 136 HSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQH--KPRHVLLVDRGLAPM---ARVA--- 207 (629)
T ss_pred EEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCC--CCCEEEEEeCCCCCc---Cccc---
Confidence 9999999999999999999999999997642 2333333332211 133455444321100 0000
Q ss_pred CCCchhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHh-cccccccCCCCEEEEecCch
Q 008636 162 PADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVD-SLIDWVVPKQSVLLWTLPMF 240 (558)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~ 240 (558)
.....+.++...............++++++++|||||||.||+|+++|.++...... ....+++.+++++++..|+.
T Consensus 208 --~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 285 (629)
T PRK10524 208 --GRDVDYATLRAQHLGARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFGGKAGETFFCASDIG 285 (629)
T ss_pred --CCcccHHHHHhcCCCCCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCCEEEEcCCCC
Confidence 001234444333221111112245789999999999999999999999987544433 33345778899999999999
Q ss_pred hhhhh-hHHHHHHHhcceEEEecC----CCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc----cccCCCCceEEEEecC
Q 008636 241 HNNGW-SFTWGAAVVGATNVCLRK----FDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP----EAKQLDRPVRILTAGS 311 (558)
Q Consensus 241 ~~~g~-~~~~~~l~~g~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~----~~~~~~~l~~v~~~g~ 311 (558)
|..+. ..++.+++.|+++++.+. .++..+++.++++++|++.++|++++.|.+.. ....++++|.++++|+
T Consensus 286 ~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~Ge 365 (629)
T PRK10524 286 WVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALLRKHDLSSLRALFLAGE 365 (629)
T ss_pred eeccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccccccChhheeEEEEeCC
Confidence 98876 568889999999998763 47899999999999999999999999987753 2345789999999999
Q ss_pred CCChhhhHHhh-hcCCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCC
Q 008636 312 PPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDG 390 (558)
Q Consensus 312 ~l~~~~~~~~~-~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~ 390 (558)
++++++.+++. .+++++++.||+||++.......... .......+++|.|.+++ +++|+|++++++++.+
T Consensus 366 ~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~-------~~~~~~~~~~G~p~~g~-~~~i~d~~~g~~~~~g- 436 (629)
T PRK10524 366 PLDEPTASWISEALGVPVIDNYWQTETGWPILAIARGV-------EDRPTRLGSPGVPMYGY-NVKLLNEVTGEPCGPN- 436 (629)
T ss_pred CCCHHHHHHHHHhcCCCeEeccccccccchhhcCCCCc-------ccCcCCCCCcccCcCCc-eEEEEeCCCCCCCCCC-
Confidence 99999998887 46899999999999985433221110 00112346789999998 9999998678888877
Q ss_pred CeeeEEEEecc---cccccccCCchhhcccc----cCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHH
Q 008636 391 QTRGEIVMRGG---SLMLGYLKDPEATSKCM----KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVL 463 (558)
Q Consensus 391 ~~~Gel~v~~~---~~~~gy~~~~~~~~~~~----~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l 463 (558)
+.|||+++|| +++.+||++++.+...+ .++||+|||+|++++||.+++.||+||+||++|.+|+|.+||++|
T Consensus 437 -~~Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l 515 (629)
T PRK10524 437 -EKGVLVIEGPLPPGCMQTVWGDDDRFVKTYWSLFGRQVYSTFDWGIRDADGYYFILGRTDDVINVAGHRLGTREIEESI 515 (629)
T ss_pred -CcEEEEEcCCCChhhcCCccCChHHHHHhhhccCCCcEEEcCCcEEEcCCCcEEEEEEecCeEEeCCEEeCHHHHHHHH
Confidence 7899999998 57889999987665433 468999999999999999999999999999999999999999999
Q ss_pred hcCCCcceeEEEeeeCCCCCceeEEEEEecCCCCCCC---CCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcch
Q 008636 464 YSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGG---MMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540 (558)
Q Consensus 464 ~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~---~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~ 540 (558)
.++|+|.+++|++.+++..|+.+++++++.++....+ .....++|+++++++|++++.|..|+++++||+|++||++
T Consensus 516 ~~~p~V~e~~vvg~~d~~~g~~~~~~vv~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~ 595 (629)
T PRK10524 516 SSHPAVAEVAVVGVKDALKGQVAVAFVVPKDSDSLADREARLALEKEIMALVDSQLGAVARPARVWFVSALPKTRSGKLL 595 (629)
T ss_pred HhCCCcceEEEEccccCCCCeEEEEEEEECCCCccccccchHHHHHHHHHHHHhhcCCCcCCCEEEEcCCCCCCCCcchH
Confidence 9999999999999999988999999999876532110 0023567899999999999999999999999999999999
Q ss_pred hHHHHHHHhhc
Q 008636 541 KYVLGDIANSM 551 (558)
Q Consensus 541 r~~l~~~~~~~ 551 (558)
|+.|++++...
T Consensus 596 R~~L~~~~~~~ 606 (629)
T PRK10524 596 RRAIQAIAEGR 606 (629)
T ss_pred HHHHHHHHcCC
Confidence 99999987643
No 36
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1.8e-68 Score=567.59 Aligned_cols=519 Identities=20% Similarity=0.216 Sum_probs=395.8
Q ss_pred CChhhHHHHHhhcCCCCceEEEC----C-----ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHH
Q 008636 14 LTPLGFIERAATACDDCPSIIYN----D-----TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAV 84 (558)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~----~-----~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~ 84 (558)
.|+.++|+++++++|+++|+.+. + +++||+|+.+++.++|++|.++|+++||+|+|+++|+++|++++|||
T Consensus 45 ~t~~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~~~~lA~ 124 (666)
T PLN02614 45 DSCWDVFRMSVEKYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEWIISMEAC 124 (666)
T ss_pred CcHHHHHHHHHHhCCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 49999999999999999999842 1 24899999999999999999999999999999999999999999999
Q ss_pred hhcCcEEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCC
Q 008636 85 PMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPAD 164 (558)
Q Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (558)
+++|++++|+++.++.+++.+++++++++++|++.+....+........ .....++.++....... ........
T Consensus 125 ~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~--~~l~~vi~~~~~~~~~~----~~~~~~~~ 198 (666)
T PLN02614 125 NAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELFKTCPNST--EYMKTVVSFGGVSREQK----EEAETFGL 198 (666)
T ss_pred HHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHHHHhccccc--ccceEEEEeCCCChHHh----hhhhhcCc
Confidence 9999999999999999999999999999999998764443322211100 01233444432110000 00000000
Q ss_pred chhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhccccc-----ccCCCCEEEEecCc
Q 008636 165 FVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDW-----VVPKQSVLLWTLPM 239 (558)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~ 239 (558)
....+.+++..+...........++|+++|+|||||||.||||++||+++..........+ .+..+|++++.+|+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl 278 (666)
T PLN02614 199 VIYAWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTVKDVYLSYLPL 278 (666)
T ss_pred EEEEHHHHHhhcccCCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCCCcEEEEeccH
Confidence 1234555544332111111224578999999999999999999999999987665443322 46789999999999
Q ss_pred hhhhhhhHHHHHHHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCccc----------------------
Q 008636 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA---------------------- 297 (558)
Q Consensus 240 ~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~---------------------- 297 (558)
+|..++.....++..|+++++.+ .++..+++.+++++||+++++|.+++.+.+....
T Consensus 279 ~H~~~~~~~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 357 (666)
T PLN02614 279 AHIFDRVIEECFIQHGAAIGFWR-GDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFVFDSAFSYKFG 357 (666)
T ss_pred HHHHHHHHHHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 99998866667778899988865 5899999999999999999999999987642100
Q ss_pred ------------------------cCC-CCceEEEEecCCCChhhhHHhhhc-CCeeeecccCCCCCCcccccCCCCCCC
Q 008636 298 ------------------------KQL-DRPVRILTAGSPPPAPVLLRTESL-GFIVSHGYGKTEIAGVNVSCAWKPKWN 351 (558)
Q Consensus 298 ------------------------~~~-~~l~~v~~~g~~l~~~~~~~~~~~-~~~v~~~YG~tE~g~~~~~~~~~~~~~ 351 (558)
..+ +++|.+++||+++++.+.+.++.+ ++++++.||+||+++..+.....
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~---- 433 (666)
T PLN02614 358 NMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHVESFLRVVACCHVLQGYGLTESCAGTFVSLPD---- 433 (666)
T ss_pred HHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHhcCCCEEeeCchHhhhhheeeeccc----
Confidence 011 589999999999998765544455 58999999999987654432210
Q ss_pred CCChhhhhhhcccCCceecccceeeEeCC-C-CCcccCCCCCeeeEEEEecccccccccCCchhhcccccCCceeeCcee
Q 008636 352 KLPARERASLKARQGVRTIGLTEVDIVDP-E-TGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVG 429 (558)
Q Consensus 352 ~~~~~~~~~~~~~~g~~~~~~~~~~i~d~-~-~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~ 429 (558)
.....+++|.|.+++ +++|+|. + .+.+++++ +.|||+|+|++++.|||++|+.+.+.|.+|||+|||+|
T Consensus 434 ------~~~~~gsvG~p~pg~-evki~d~~~~~~~~~~~g--~~GEl~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg 504 (666)
T PLN02614 434 ------ELDMLGTVGPPVPNV-DIRLESVPEMEYDALAST--PRGEICIRGKTLFSGYYKREDLTKEVLIDGWLHTGDVG 504 (666)
T ss_pred ------cCCcCCcccCcCCce-EEEEeeecccCcccCCCC--CCceEEEcCCcccccccCCHHHhhhhhccCCcccceEE
Confidence 012346899999998 9999983 2 24567666 78999999999999999999999999999999999999
Q ss_pred EEccCCcEEEecccCCeee-eCceeechHHHHHHHhcCCCcceeEEEeeeCCCCCceeEEEEEecCCCC-----CCCC--
Q 008636 430 MMHPDGYLEIKDRSKDVII-SGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTD-----SGGM-- 501 (558)
Q Consensus 430 ~~~~~g~l~~~GR~~d~i~-~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~-----~~~~-- 501 (558)
++|+||+|++.||++|+|| .+|++|+|.+||++|.++|.|.+++|++.+.. ..++++|++..... ..+.
T Consensus 505 ~~d~dG~l~i~gR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~~~V~g~~~~---~~l~alvv~~~~~~~~~~~~~~~~~ 581 (666)
T PLN02614 505 EWQPNGSMKIIDRKKNIFKLSQGEYVAVENIENIYGEVQAVDSVWVYGNSFE---SFLVAIANPNQQILERWAAENGVSG 581 (666)
T ss_pred EEcCCCCEEEEEcchhceecCCCeeecHHHHHHHHhcCCCeeEEEEEecCCc---ceEEEEEeCCHHHHHHHHHhcCCCc
Confidence 9999999999999999999 57999999999999999999999999997632 24888888764310 0000
Q ss_pred --------CCCHHHHHHHH-----HhcCCCccccCeEEEecc-c-----CCCCCCcchhHHHHHHHhhccccc
Q 008636 502 --------MTTEKDIIQYC-----RARIPRYMVPKTVVFIDE-L-----PKTATGKVQKYVLGDIANSMSMSH 555 (558)
Q Consensus 502 --------~~~~~~l~~~~-----~~~l~~~~~p~~i~~v~~-~-----P~t~~GK~~r~~l~~~~~~~~~~~ 555 (558)
....+.+.+.+ ++.|+.+.+++.|+++++ | .+|+++|+.|..+++.|++.+..-
T Consensus 582 ~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~l~~~~f~~~ng~lTpt~K~kR~~i~~~y~~~i~~l 654 (666)
T PLN02614 582 DYNALCQNEKAKEFILGELVKMAKEKKMKGFEIIKAIHLDPVPFDMERDLLTPTFKKKRPQLLKYYQSVIDEM 654 (666)
T ss_pred CHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCCcCCcCCHhhhhhHHHHHHHHHHHHHHH
Confidence 00112233322 356999999999998853 3 389999999999999998876543
No 37
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.3e-67 Score=547.74 Aligned_cols=514 Identities=26% Similarity=0.415 Sum_probs=423.3
Q ss_pred CCCCCCChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcC
Q 008636 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSG 88 (558)
Q Consensus 9 ~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G 88 (558)
+-..++|+.++|.++++++|+++|+.+.++++||+||.+++.++|..|.+.|+++|++|+++++|+++++++++||+++|
T Consensus 2 ~~~~~~~~~~~~~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G 81 (528)
T PRK07470 2 MSRRVMNLAHFLRQAARRFPDRIALVWGDRSWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFESMFAAFRLG 81 (528)
T ss_pred CcccCCCHHHHHHHHHHHCCCceEEEECCccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhCC
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhh
Q 008636 89 AIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT 168 (558)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (558)
++++++++..+.+++..+++.+++++++++.+............. ....++.+..... ...
T Consensus 82 ~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~----------------~~~ 142 (528)
T PRK07470 82 AVWVPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAVRAASP---DLTHVVAIGGARA----------------GLD 142 (528)
T ss_pred eEEEecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHHHhhCC---cCceEEEeCCCcc----------------ccc
Confidence 999999999999999999999999999999876554444332211 1222333322110 123
Q ss_pred HHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhccccc--ccCCCCEEEEecCchhhhhhh
Q 008636 169 YENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDW--VVPKQSVLLWTLPMFHNNGWS 246 (558)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~g~~ 246 (558)
+.++...............++++++|+|||||||.||+|.++|+++..........+ +....|+++...|++|..++.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~ 222 (528)
T PRK07470 143 YEALVARHLGARVANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLSHGAGIH 222 (528)
T ss_pred HHHHHhcCCCCCCCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccchhHHHHH
Confidence 444433321111122235678999999999999999999999999865433322221 456789999999999999886
Q ss_pred HHHHHHHhcceEEEec--CCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc--cccCCCCceEEEEecCCCChhhhHHhh
Q 008636 247 FTWGAAVVGATNVCLR--KFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRPVRILTAGSPPPAPVLLRTE 322 (558)
Q Consensus 247 ~~~~~l~~g~~~~~~~--~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~--~~~~~~~l~~v~~~g~~l~~~~~~~~~ 322 (558)
.++ .++.|++.++.+ .++++.+++.++++++|++.++|++++.+.+.. ....++++|.+++||+++++....++.
T Consensus 223 ~~~-~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~ 301 (528)
T PRK07470 223 QLC-QVARGAATVLLPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEHPAVDRYDHSSLRYVIYAGAPMYRADQKRAL 301 (528)
T ss_pred HHH-HHhcCceEEEecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcCcCCCCCcceEEEEEcCCCCCHHHHHHHH
Confidence 554 567777777665 478999999999999999999999999998765 234577999999999999999988886
Q ss_pred -hcCCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecc
Q 008636 323 -SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGG 401 (558)
Q Consensus 323 -~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~ 401 (558)
.++..+++.||+||+++.+..+..... ... .......+++|.+.+++ .++++|+ ++.+++.+ +.|||+++|+
T Consensus 302 ~~~g~~~~~~YG~TE~~~~~~~~~~~~~--~~~-~~~~~~~~~~G~~~~g~-~~~i~d~-~~~~~~~g--~~Gel~i~~~ 374 (528)
T PRK07470 302 AKLGKVLVQYFGLGEVTGNITVLPPALH--DAE-DGPDARIGTCGFERTGM-EVQIQDD-EGRELPPG--ETGEICVIGP 374 (528)
T ss_pred HHhCcHHHHhCCCcccCCceeecchhhc--ccc-ccccceeeccCcccCCc-EEEEECC-CCCCCCCC--CceEEEEeCC
Confidence 568899999999999876654321100 000 00122346789999998 9999997 67888877 7899999999
Q ss_pred cccccccCCchhhcccccCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCCC
Q 008636 402 SLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481 (558)
Q Consensus 402 ~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~ 481 (558)
.++.||+++++.+...|.+|||+|||+|+++++|.+++.||.||+|+.+|.+|+|.+||+.|.+++.|.+++|++.+++.
T Consensus 375 ~~~~gy~~~~~~~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~ 454 (528)
T PRK07470 375 AVFAGYYNNPEANAKAFRDGWFRTGDLGHLDARGFLYITGRASDMYISGGSNVYPREIEEKLLTHPAVSEVAVLGVPDPV 454 (528)
T ss_pred ccchhhcCCHHHHHhhhcCCcEecceeEEEccCCeEEEeCCccceEEeCCEEECHHHHHHHHHhCCCceEEEEEeccCcc
Confidence 99999999999998888999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHhhcccc
Q 008636 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSMSMS 554 (558)
Q Consensus 482 ~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~~~~~ 554 (558)
.++.++++++..++.. .+.+++++++++.|+++++|..++++++||+|++||++|+.|++++++.-..
T Consensus 455 ~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~l~~~~~P~~~~~~~~iP~t~~GKi~r~~l~~~~~~~~~~ 522 (528)
T PRK07470 455 WGEVGVAVCVARDGAP-----VDEAELLAWLDGKVARYKLPKRFFFWDALPKSGYGKITKKMVREELEERGLL 522 (528)
T ss_pred cCceeEEEEEECCCCC-----CCHHHHHHHHHHhhhcCCCCcEEEEeccCCCCCcccccHHHHHHHHHhcccc
Confidence 8888888888776543 5778999999999999999999999999999999999999999998876543
No 38
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=8.8e-67 Score=555.06 Aligned_cols=510 Identities=21% Similarity=0.258 Sum_probs=397.6
Q ss_pred ChhhHHHHHhhcCCCCceEEECC-----ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCc
Q 008636 15 TPLGFIERAATACDDCPSIIYND-----TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGA 89 (558)
Q Consensus 15 tl~~~l~~~a~~~p~~~a~~~~~-----~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 89 (558)
.-..+.+...++.++++|+++.+ +.+||+||.+++.++|++|+++|+++||+|+++++|++++++++|||+++|+
T Consensus 85 ~~~n~~~~~~~~~~~~~a~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~~~lA~~~~Ga 164 (652)
T TIGR01217 85 ARLNYAENLLRAAGTEPALLYVDETHEPAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVVAMLATASVGA 164 (652)
T ss_pred CeeeHHHHHhccCCCCeEEEEECCCCCeeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCe
Confidence 33334444444467899988843 5799999999999999999999999999999999999999999999999999
Q ss_pred EEEeccccCChHHHHHHHhhcCccEEEEeCcC---------hHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCC
Q 008636 90 IFNTINTRLDARTISIILKHSESKLVFVDHLS---------SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRI 160 (558)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (558)
+++|+++.++.+++..++++++++++|+++.. ...+.++....+ ....++.+........ ... .
T Consensus 165 v~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~--~~~-~- 237 (652)
T TIGR01217 165 IWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELP---TLRAVVHIPYLGPRET--EAP-K- 237 (652)
T ss_pred EEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCC---CccEEEEEeCCCCccc--ccc-c-
Confidence 99999999999999999999999999997653 334444443322 2334444432110000 000 0
Q ss_pred CCCCchhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHH-HhcccccccCCCCEEEEecCc
Q 008636 161 PPADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIA-VDSLIDWVVPKQSVLLWTLPM 239 (558)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~ 239 (558)
......+.++................+++++|+|||||||.||||+++|.++.... ......+++.++|++++..|+
T Consensus 238 --~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 315 (652)
T TIGR01217 238 --IDGALDLEDFTAAAQAAELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHCDLGPGDRLFYYTTT 315 (652)
T ss_pred --ccCcccHHHHHhcccCCCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhccCCCCCcEEEEeCCc
Confidence 00123455555432111111123556899999999999999999999999875433 333445678899999999999
Q ss_pred hhhhhhhHHHHHHHhcceEEEecC----CCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc----cccCCCCceEEEEecC
Q 008636 240 FHNNGWSFTWGAAVVGATNVCLRK----FDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP----EAKQLDRPVRILTAGS 311 (558)
Q Consensus 240 ~~~~g~~~~~~~l~~g~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~----~~~~~~~l~~v~~~g~ 311 (558)
.|+.+ ..++.+++.|+++++.+. .++..++++++++++|++...|.+++.+.... ....++++|.+++||+
T Consensus 316 ~~~~~-~~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~l~sLr~i~~gGe 394 (652)
T TIGR01217 316 GWMMW-NWLVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVHPARTHDLSALQCVASTGS 394 (652)
T ss_pred chhhh-HHHHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCCccccCChhheeEEEeecC
Confidence 88753 345689999999999863 37889999999999999988888888776532 2346789999999999
Q ss_pred CCChhhhHHhhh-c--CCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCC
Q 008636 312 PPPAPVLLRTES-L--GFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKR 388 (558)
Q Consensus 312 ~l~~~~~~~~~~-~--~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~ 388 (558)
++++++.+++.+ + +..+.+.||+||+++...... + ......+++|.|.++. +++|+|+ +|+++ .
T Consensus 395 ~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~--~--------~~~~~~g~~g~p~~g~-~v~ivd~-~g~~~-~ 461 (652)
T TIGR01217 395 PLPPDGFRWVYDEIKADVWLASISGGTDICSCFAGAN--P--------TLPVHIGEIQAPGLGT-AVQSWDP-EGKPV-T 461 (652)
T ss_pred CCCHHHHHHHHHHhCCCceEEeccCHHHHhccccCCC--C--------CCCCcCCccCCCcCCC-ceEEECC-CCCCC-C
Confidence 999999988874 4 356788999999753332211 0 0012235778899998 9999997 67776 4
Q ss_pred CCCeeeEEEEecc--cccccccCCchhhc---ccc--cCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHH
Q 008636 389 DGQTRGEIVMRGG--SLMLGYLKDPEATS---KCM--KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIES 461 (558)
Q Consensus 389 ~~~~~Gel~v~~~--~~~~gy~~~~~~~~---~~~--~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~ 461 (558)
+ +.|||+++|+ +++.|||++++.+. ..| .+|||+|||+|++|+||.+++.||+||+|+++|.+|+|.+||+
T Consensus 462 g--~~GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~~~~g~~~tGDlg~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~ 539 (652)
T TIGR01217 462 G--EVGELVCTNPMPSMPIRFWNDPDGSKYRDAYFDTYPGVWRHGDWITLTPRGGIVIHGRSDSTLNPQGVRMGSAEIYN 539 (652)
T ss_pred C--CccEEEEecCCCccccceeCCCccchhHHhhhcCCCCEEEcCCcEEECCCCcEEEEecccCeEecCCEEcCHHHHHH
Confidence 5 7899999996 68899999997543 122 2689999999999999999999999999999999999999999
Q ss_pred HHhcCCCcceeEEEeeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchh
Q 008636 462 VLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541 (558)
Q Consensus 462 ~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r 541 (558)
+|.+||+|.+++|++++++..|+.++++|++.++.... ....++|+++++++|+++++|+.|+++++||+|++||++|
T Consensus 540 ~l~~~p~V~eaavvg~~~~~~ge~~~afVv~~~~~~~~--~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~r 617 (652)
T TIGR01217 540 AVERLDEVRESLCIGQEQPDGGYRVVLFVHLAPGATLD--DALLDRIKRTIRAGLSPRHVPDEIIEVPGIPHTLTGKRVE 617 (652)
T ss_pred HHHhCCCcceEEEEeeecCCCCEEEEEEEEECCCCCCC--HHHHHHHHHHHHhhCCCCcCCCEEEECCCCCCCCCccChH
Confidence 99999999999999999999999999999998764311 0123689999999999999999999999999999999999
Q ss_pred HHHHHHHhhc
Q 008636 542 YVLGDIANSM 551 (558)
Q Consensus 542 ~~l~~~~~~~ 551 (558)
+.|++++++.
T Consensus 618 ~~Lr~~~~~~ 627 (652)
T TIGR01217 618 VAVKRVLQGT 627 (652)
T ss_pred HHHHHHHcCC
Confidence 9999998644
No 39
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.8e-67 Score=549.79 Aligned_cols=515 Identities=21% Similarity=0.228 Sum_probs=403.6
Q ss_pred CCCCCCCCChhhHHHHHhhcCCCCceEEECC--ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHH
Q 008636 7 NPANSCPLTPLGFIERAATACDDCPSIIYND--TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAV 84 (558)
Q Consensus 7 ~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~--~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~ 84 (558)
-++..-+.++.+.|.++++++|+++|+++.+ +.+||+||.+++.++|+.|.+.|+++||+|+++++|++++++++|||
T Consensus 7 ~~~~~~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~~~~lA~ 86 (540)
T PRK05857 7 QAMPQLPSTVLDRVFEQARQQPEAIALRRCDGTSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETYLSVLAC 86 (540)
T ss_pred cccccCCcchHHHHHHHHhhCCCcEEEeecCCCceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHHHHHHHH
Confidence 3455666799999999999999999998633 68999999999999999999999999999999999999999999999
Q ss_pred hhcCcEEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCC
Q 008636 85 PMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPAD 164 (558)
Q Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (558)
+++|++++|+++.++.+++.++++.++++++|+++........+.... .....+.++...... .
T Consensus 87 ~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~------~------ 150 (540)
T PRK05857 87 AKLGAIAVMADGNLPIAAIERFCQITDPAAALVAPGSKMASSAVPEAL----HSIPVIAVDIAAVTR------E------ 150 (540)
T ss_pred HHcCeEEEecCccCCHHHHHHHHHhcCCceEEEeccchhccccccccc----cccceeEeecccccc------c------
Confidence 999999999999999999999999999999999876432111111000 011122221111000 0
Q ss_pred chhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcc----cccccCCCCEEEEecCch
Q 008636 165 FVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSL----IDWVVPKQSVLLWTLPMF 240 (558)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~----~~~~~~~~~~~~~~~p~~ 240 (558)
+........ .........+++++++|||||||.||+|.++|+++..+..... ..+.+..+++.+..+|++
T Consensus 151 ----~~~~~~~~~--~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 224 (540)
T PRK05857 151 ----SEHSLDAAS--LAGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPAT 224 (540)
T ss_pred ----ccccccccc--cccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCCcc
Confidence 000000000 0011224568999999999999999999999999876543211 223456778999999999
Q ss_pred hhhhhhHHHHHHHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc--cccCCCCceEEEEecCCCChhhh
Q 008636 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRPVRILTAGSPPPAPVL 318 (558)
Q Consensus 241 ~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~--~~~~~~~l~~v~~~g~~l~~~~~ 318 (558)
|..++...+.+++.|+++++ ...++..+++.++++++|+++++|+++..+.+.. ....++++|.+++||++++....
T Consensus 225 h~~~l~~~~~~l~~G~~~v~-~~~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~ 303 (540)
T PRK05857 225 HIGGLWWILTCLMHGGLCVT-GGENTTSLLEILTTNAVATTCLVPTLLSKLVSELKSANATVPSLRLVGYGGSRAIAADV 303 (540)
T ss_pred ccchHHHHHHHhhcceeEEe-cCCChhHHHHHHHhcCcceEEeChHHHHHHHhccccCCCcCccceEEEEcCccCCchhH
Confidence 99998888889999998765 4568899999999999999999999999998765 23467799999999999988877
Q ss_pred HHhhhcCCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCC---CCeeeE
Q 008636 319 LRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRD---GQTRGE 395 (558)
Q Consensus 319 ~~~~~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~---~~~~Ge 395 (558)
+.+..+++++++.||+||++.....+..... .......+++|.+.+++ +++|+|+++..+++.+ .++.||
T Consensus 304 ~~~~~~g~~i~~~YG~TE~~~~~~~~~~~~~------~~~~~~~~~~G~~~~g~-~v~i~d~~~~~~~~~~~~~~~~~Ge 376 (540)
T PRK05857 304 RFIEATGVRTAQVYGLSETGCTALCLPTDDG------SIVKIEAGAVGRPYPGV-DVYLAATDGIGPTAPGAGPSASFGT 376 (540)
T ss_pred HHHHHhCCeeecccCCCcCCceeeecccccc------cccccccCCcCcccCCc-EEEEECccccCccccccCCCCCcce
Confidence 6555679999999999999865443221110 00011246799999998 9999997444333321 237899
Q ss_pred EEEecccccccccCCchhhcccccCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEE
Q 008636 396 IVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVV 475 (558)
Q Consensus 396 l~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~ 475 (558)
|+++|++++.||+++++.+.+.|.+|||+|||+|++|++|.+++.||.+|+|+.+|.+|+|.+||++|..+|+|.+++|+
T Consensus 377 l~v~g~~~~~GY~~~~~~t~~~~~~g~~~TGDlg~~d~~g~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~~~V~~~~v~ 456 (540)
T PRK05857 377 LWIKSPANMLGYWNNPERTAEVLIDGWVNTGDLLERREDGFFYIKGRSSEMIICGGVNIAPDEVDRIAEGVSGVREAACY 456 (540)
T ss_pred EEEeCcchhhhhhCCccchhhhcCCCceeccceEEEcCCceEEEeccccccEecCCEEECHHHHHHHHHhCCCeeEEEEE
Confidence 99999999999999999999889999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHhhc
Q 008636 476 GRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSM 551 (558)
Q Consensus 476 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~~ 551 (558)
+.+++..++.++++++..+...........+.+.+.+++.++++++|+.++++++||+|++||++|++|++.++..
T Consensus 457 ~~~~~~~~~~~~~~vv~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~P~~v~~~~~iP~t~~GKi~r~~l~~~~~~~ 532 (540)
T PRK05857 457 EIPDEEFGALVGLAVVASAELDESAARALKHTIAARFRRESEPMARPSTIVIVTDIPRTQSGKVMRASLAAAATAD 532 (540)
T ss_pred ecCccccccceEEEEEeCCCCChhhHHHHHHHHHHHHHhhhccccCCeEEEEhhcCCCCCCcceeHHHHHHhhhhc
Confidence 9999888888888887654422100001123445566677999999999999999999999999999999998754
No 40
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.8e-66 Score=540.08 Aligned_cols=490 Identities=31% Similarity=0.452 Sum_probs=415.4
Q ss_pred CChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEe
Q 008636 14 LTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNT 93 (558)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 93 (558)
+++.++|+++++.+|+++|+.+.++.+||.||.+++.++|.+|.+.|+++|++|+++++|++++++++|||+++|++++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~a~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~ 81 (497)
T PRK06145 2 FNLSASIAFHARRTPDRAALVYRDQEISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSAAFLELAFAASYLGAVFLP 81 (497)
T ss_pred ccHHHHHHHHHHHCCCceEEEECCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEe
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhHHHhh
Q 008636 94 INTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENML 173 (558)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (558)
+++..+.+.+..+++.+++++++++.+....... ......++.... ..+..+.
T Consensus 82 l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~----------~~~~~~~~~~~~-----------------~~~~~~~ 134 (497)
T PRK06145 82 INYRLAADEVAYILGDAGAKLLLVDEEFDAIVAL----------ETPKIVIDAAAQ-----------------ADSRRLA 134 (497)
T ss_pred cccccCHHHHHHHHHhcCCcEEEEccchhhhhhc----------ccceEEecCccc-----------------chhHHHh
Confidence 9999999999999999999999998765432110 111222211100 0000111
Q ss_pred cCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhhh-HHHHHH
Q 008636 174 AKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWS-FTWGAA 252 (558)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~-~~~~~l 252 (558)
.............++++++++|||||||.||+|.++|+++..........+++..+++++...|++|.+++. ..+.++
T Consensus 135 -~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l 213 (497)
T PRK06145 135 -QGGLEIPPQAAVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIALGLTASERLLVVGPLYHVGAFDLPGIAVL 213 (497)
T ss_pred -ccCCCCCCCCCCCccceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCcEEEEecCchhHhHHHHHHHHHH
Confidence 011111111234678999999999999999999999999876666555667888999999999999998874 456788
Q ss_pred HhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCcc--ccCCCCceEEEEecCCCChhhhHHhhh-c-CCee
Q 008636 253 VVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE--AKQLDRPVRILTAGSPPPAPVLLRTES-L-GFIV 328 (558)
Q Consensus 253 ~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~--~~~~~~l~~v~~~g~~l~~~~~~~~~~-~-~~~v 328 (558)
..|+++++.+.+++..+++.++++++|++.++|+++..++.... ...++++|.+++||++++..+++.+.+ + +.++
T Consensus 214 ~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v 293 (497)
T PRK06145 214 WVGGTLRIHREFDPEAVLAAIERHRLTCAWMAPVMLSRVLTVPDRDRFDLDSLAWCIGGGEKTPESRIRDFTRVFTRARY 293 (497)
T ss_pred hccCEEEECCcCCHHHHHHHHHHhCCeEEEehHHHHHHHHcCCCccccccccceEEEecCCCCCHHHHHHHHHHcCCCce
Confidence 89999999888999999999999999999999999999987652 334678999999999999999999884 4 6889
Q ss_pred eecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEeccccccccc
Q 008636 329 SHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYL 408 (558)
Q Consensus 329 ~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~ 408 (558)
++.||+||+++......... .....+++|.+.+++ .+++.|+ ++..++.+ +.|||+++|++++.||+
T Consensus 294 ~~~YG~tE~~~~~~~~~~~~---------~~~~~~~~G~~~~~~-~~~i~~~-~~~~~~~~--~~Gel~v~g~~~~~Gy~ 360 (497)
T PRK06145 294 IDAYGLTETCSGDTLMEAGR---------EIEKIGSTGRALAHV-EIRIADG-AGRWLPPN--MKGEICMRGPKVTKGYW 360 (497)
T ss_pred EEeecCcccCCcceeccCcc---------ccccCCCcccCCCCc-eEEEECC-CCCCCCCC--CceEEEEECcchhhhhc
Confidence 99999999987544322111 112235789999998 9999997 67778777 78999999999999999
Q ss_pred CCchhhcccccCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCCCCCceeEE
Q 008636 409 KDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCA 488 (558)
Q Consensus 409 ~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~ 488 (558)
++++.+...|.++||+|||+|+++++|.+++.||++|+|+.+|.+++|.+||+.|.++++|.+++|++.+++..++.+++
T Consensus 361 ~~~~~~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~ 440 (497)
T PRK06145 361 KDPEKTAEAFYGDWFRSGDVGYLDEEGFLYLTDRKKDMIISGGENIASSEVERVIYELPEVAEAAVIGVHDDRWGERITA 440 (497)
T ss_pred CChHHHHHHHhCCCeeccceEEEcCCCcEEEeccccceEEeCCeEECHHHHHHHHHhCCCeeEEEEEecCCCccCceEEE
Confidence 99999988888999999999999999999999999999999999999999999999999999999999999888889999
Q ss_pred EEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHh
Q 008636 489 FVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIAN 549 (558)
Q Consensus 489 ~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~ 549 (558)
++++.+... ...+++.++++++|+++++|..++++++||+|++||++|++|+++++
T Consensus 441 ~v~~~~~~~-----~~~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~GKi~r~~l~~~~~ 496 (497)
T PRK06145 441 VVVLNPGAT-----LTLEALDRHCRQRLASFKVPRQLKVRDELPRNPSGKVLKRVLRDELN 496 (497)
T ss_pred EEEECCCCC-----CCHHHHHHHHHHhhhcCCCCCEEEEeccCCCCCcccccHHHHHHHhc
Confidence 998876543 57789999999999999999999999999999999999999999875
No 41
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.7e-66 Score=543.28 Aligned_cols=513 Identities=26% Similarity=0.368 Sum_probs=431.2
Q ss_pred CCCCCCCCChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhh
Q 008636 7 NPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPM 86 (558)
Q Consensus 7 ~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~ 86 (558)
.|--..-+|+.+.+++++..+|+++|+.+.++.+||.||.+++.++|.+|.+.|+++|++|+|+++|+++++++++||++
T Consensus 10 ~~~~~~~~n~~~~~~~~a~~~~~~~a~~~~~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~~a~~~ 89 (542)
T PRK07786 10 QPYLARRQNWVNQLARHALMQPDAPALRFLGNTTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEFVESVLAANM 89 (542)
T ss_pred CCCcccccCHHHHHHHHHHHCCCCeEEEeCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 34445667899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcEEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCch
Q 008636 87 SGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFV 166 (558)
Q Consensus 87 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (558)
+|++++|+++..+.+++..+++.+++++++++......+........ ....++...+.... ..
T Consensus 90 ~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--------------~~ 152 (542)
T PRK07786 90 LGAIAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATAVRDIVP---LLSTVVVAGGSSDD--------------SV 152 (542)
T ss_pred cCeEEEEcCccCCHHHHHHHHHhCCCcEEEEccchHHHHHHhhhccC---ccceEEEecCCCcc--------------cc
Confidence 99999999999999999999999999999998876655544332221 12333333321100 01
Q ss_pred hhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhccccccc-CCCCEEEEecCchhhhhh
Q 008636 167 DTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVV-PKQSVLLWTLPMFHNNGW 245 (558)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~g~ 245 (558)
..+.+++....... .......+++++++|||||||.||+|.++|+++..........+++ ..++++++..|++|.+|+
T Consensus 153 ~~~~~~~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~ 231 (542)
T PRK07786 153 LGYEDLLAEAGPAH-APVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTNGADINSDVGFVGVPLFHIAGI 231 (542)
T ss_pred cCHHHHhhccCCCC-CCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhcCCCCCCceEEEecchHHHHHH
Confidence 33444443322221 1223556789999999999999999999999998777666555555 577899999999999999
Q ss_pred hHHHHHHHhcceEEEec--CCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCccc-cCCCCceEEEEecCCCChhhhHHhh
Q 008636 246 SFTWGAAVVGATNVCLR--KFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA-KQLDRPVRILTAGSPPPAPVLLRTE 322 (558)
Q Consensus 246 ~~~~~~l~~g~~~~~~~--~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~-~~~~~l~~v~~~g~~l~~~~~~~~~ 322 (558)
..++.++..|+++++.+ .+++..+++.++++++|+++++|+++..+...... ....+++.+++||+++++++++.+.
T Consensus 232 ~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~lr~i~~gg~~~~~~~~~~~~ 311 (542)
T PRK07786 232 GSMLPGLLLGAPTVIYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARPRDLALRVLSWGAAPASDTLLRQMA 311 (542)
T ss_pred HHHHHHHHccCEEEEccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCccCcceEEEEECCCCCCHHHHHHHH
Confidence 88999999999999865 57899999999999999999999999999876522 2223689999999999999999988
Q ss_pred h-c-CCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEec
Q 008636 323 S-L-GFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRG 400 (558)
Q Consensus 323 ~-~-~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~ 400 (558)
+ + +..+++.||+||++++...+... .......++|.|.++. .++|+|+ ++..++.+ +.|||+++|
T Consensus 312 ~~~~~~~l~~~YG~tE~~~~~~~~~~~---------~~~~~~~~~G~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~g 378 (542)
T PRK07786 312 ATFPEAQILAAFGQTEMSPVTCMLLGE---------DAIRKLGSVGKVIPTV-AARVVDE-NMNDVPVG--EVGEIVYRA 378 (542)
T ss_pred HHcCCCeEEeeecccccccceEecCcc---------cccccCCCccccCCCc-eEEEECC-CCCCCcCC--CceEEEEEC
Confidence 4 4 78999999999998776644321 1122345789999998 9999996 67888777 789999999
Q ss_pred ccccccccCCchhhcccccCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCC
Q 008636 401 GSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480 (558)
Q Consensus 401 ~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~ 480 (558)
+.++.||+++++.+...|.+|||+|||+++++++|.+++.||.+|+|+++|.+|++.+||+.|.++++|.+++|++.+++
T Consensus 379 ~~~~~gy~~~~~~~~~~f~~~~~~TGDl~~~~~~g~~~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~ 458 (542)
T PRK07786 379 PTLMSGYWNNPEATAEAFAGGWFHSGDLVRQDEEGYVWVVDRKKDMIISGGENIYCAEVENVLASHPDIVEVAVIGRADE 458 (542)
T ss_pred hhhhhhhcCCHHHHHHHhhCCcccccceEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHHhCCCccEEEEEeccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred CCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHhhcccc
Q 008636 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSMSMS 554 (558)
Q Consensus 481 ~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~~~~~ 554 (558)
..++.+++++++..+... ...+++.++++++++++++|..++++++||+|++||++|.+|++++.+.+..
T Consensus 459 ~~~~~~~~~v~~~~~~~~----~~~~~l~~~l~~~l~~~~~P~~i~~v~~iP~t~~GKv~r~~L~~~~~~~~~~ 528 (542)
T PRK07786 459 KWGEVPVAVAAVRNDDAA----LTLEDLAEFLTDRLARYKHPKALEIVDALPRNPAGKVLKTELRERYGACVNV 528 (542)
T ss_pred ccCceEEEEEEECCCCCC----CCHHHHHHHHHhhccCCCCCCEEEEeccCCCCCcccccHHHHHHHHHhhhch
Confidence 778888888887654321 5678999999999999999999999999999999999999999999887643
No 42
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.5e-66 Score=540.91 Aligned_cols=526 Identities=30% Similarity=0.475 Sum_probs=430.8
Q ss_pred CCCCCCChhhHHHHHhhcCCCCceEEE--CC--ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHH
Q 008636 9 ANSCPLTPLGFIERAATACDDCPSIIY--ND--TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAV 84 (558)
Q Consensus 9 ~~~~~~tl~~~l~~~a~~~p~~~a~~~--~~--~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~ 84 (558)
+-..+.|+.++|+++++++|++++++. .+ +++||+||.+++.++|++|++.|+++||+|+++++|++++++++|||
T Consensus 5 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~~~la~ 84 (542)
T PRK06018 5 MQDWPLLCHRIIDHAARIHGNREVVTRSVEGPIVRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLEAWYGI 84 (542)
T ss_pred hhcCCCCHHHHHHHHHHhCCCceEEEeeccCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHH
Confidence 445678999999999999999999985 23 68999999999999999999999999999999999999999999999
Q ss_pred hhcCcEEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCC
Q 008636 85 PMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPAD 164 (558)
Q Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (558)
+++|++++++++..+.+++..+++.+++++++++.+....+.+...... ....++...+...... .. ..
T Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-----~~---~~ 153 (542)
T PRK06018 85 MGIGAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKIADKLP---SVERYVVLTDAAHMPQ-----TT---LK 153 (542)
T ss_pred HhcCeEeeccccccCHHHHHHHHhccCCCEEEEccccHHHHHHHHhhCC---CccEEEEecccccccc-----cC---cc
Confidence 9999999999999999999999999999999999888777766554432 1333444433211100 00 01
Q ss_pred chhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHH-H-HhcccccccCCCCEEEEecCchhh
Q 008636 165 FVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFII-A-VDSLIDWVVPKQSVLLWTLPMFHN 242 (558)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~-~-~~~~~~~~~~~~~~~~~~~p~~~~ 242 (558)
....+.+++......+. .....++++++++|||||||.||+|.+||+++... . ......+++..+|+++...|++|.
T Consensus 154 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~h~ 232 (542)
T PRK06018 154 NAVAYEEWIAEADGDFA-WKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDALGTSAADTMLPVVPLFHA 232 (542)
T ss_pred ccccHHHHhccCCcccC-cccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhcCCCCCCEEEEecCHHHH
Confidence 12344555444332221 12346678999999999999999999999975322 2 223345678889999999999999
Q ss_pred hhhhHHHHHHHhcceEEEec-CCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCcc--ccCCCCceEEEEecCCCChhhhH
Q 008636 243 NGWSFTWGAAVVGATNVCLR-KFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE--AKQLDRPVRILTAGSPPPAPVLL 319 (558)
Q Consensus 243 ~g~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~--~~~~~~l~~v~~~g~~l~~~~~~ 319 (558)
.++...+.++..|+++++.. .+++..+++.++++++|++.++|++++.+.+... ...++++|.++++|+++++.+++
T Consensus 233 ~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~~~~~~ 312 (542)
T PRK06018 233 NSWGIAFSAPSMGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKEGLKLPHLKMVVCGGSAMPRSMIK 312 (542)
T ss_pred hhhHHHHhhhhcCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHH
Confidence 99877778889999988764 5788999999999999999999999999987652 33567899999999999999999
Q ss_pred HhhhcCCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEe
Q 008636 320 RTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMR 399 (558)
Q Consensus 320 ~~~~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~ 399 (558)
.++++++++++.||+||++.+++.+.....++............+.|.|.++. +++|+|+ ++..++.++...|||+++
T Consensus 313 ~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~-~i~v~d~-~~~~~~~~~~~~Gel~i~ 390 (542)
T PRK06018 313 AFEDMGVEVRHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGV-EMKITDD-AGKELPWDGKTFGRLKVR 390 (542)
T ss_pred HHHHhCCCeEeeecccccCcccccccCccccccCCchhhhhccccCCCCCCCc-EEEEECC-CCCCCCCCCCceeEEEEe
Confidence 99888999999999999998776654333322222222222335789899888 9999997 778887765568999999
Q ss_pred cccccccccCCchhhcccccCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeC
Q 008636 400 GGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479 (558)
Q Consensus 400 ~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~ 479 (558)
|+.++.||++... .....+|||+|||+++++++|.+++.||.+|+|+.+|.++++.+||+.+.++|+|.+++|++.++
T Consensus 391 g~~~~~gy~~~~~--~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~ 468 (542)
T PRK06018 391 GPAVAAAYYRVDG--EILDDDGFFDTGDVATIDAYGYMRITDRSKDVIKSGGEWISSIDLENLAVGHPKVAEAAVIGVYH 468 (542)
T ss_pred cCCcchhhhcCcc--cEecCCcEEEcCCEEEEcCCccEEEEecCCCeEEECCEEECHHHHHHHHHhCCcceeEEEEeccC
Confidence 9999999998432 11225789999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHhhccccc
Q 008636 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSMSMSH 555 (558)
Q Consensus 480 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~~~~~~ 555 (558)
+..++.+.+++++.++.. .+.+++.++++++++++.+|..++++++||+|++||++|++|++.+.++.++.
T Consensus 469 ~~~~~~~~~~v~~~~~~~-----~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~L~~~~~~~~~~~ 539 (542)
T PRK06018 469 PKWDERPLLIVQLKPGET-----ATREEILKYMDGKIAKWWMPDDVAFVDAIPHTATGKILKTALREQFKDYKLPT 539 (542)
T ss_pred CCcCceeEEEEEeCCCCC-----CCHHHHHHHHHhhCccccCCcEEEEeccCCCCCcchhhHHHHHHHHhccCCCC
Confidence 888889999998877654 67789999999999999999999999999999999999999999999976653
No 43
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=3e-66 Score=553.79 Aligned_cols=500 Identities=21% Similarity=0.269 Sum_probs=398.3
Q ss_pred cCCCCceEEECC-----ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccccCCh
Q 008636 26 ACDDCPSIIYND-----TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDA 100 (558)
Q Consensus 26 ~~p~~~a~~~~~-----~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~ 100 (558)
.+|+++|+++.+ +++||+||.+++.++|+.|++.|+++||+|+|+++|++++++++|||+++|++++++++.++.
T Consensus 96 ~~~~~~Al~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~v~~~lA~~~~Gav~v~l~~~~~~ 175 (655)
T PRK03584 96 RRDDRPAIIFRGEDGPRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPETVVAMLATASLGAIWSSCSPDFGV 175 (655)
T ss_pred CCCCCeEEEEECCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEeeCCCCCH
Confidence 479999999853 689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCccEEEEeCcC---------hHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhHHH
Q 008636 101 RTISIILKHSESKLVFVDHLS---------SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYEN 171 (558)
Q Consensus 101 ~~l~~~l~~~~~~~ii~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (558)
+.+..+++.++++++|+++.. ...+.++..... ....++.+...... . ..........|.+
T Consensus 176 ~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~----~---~~~~~~~~~~~~~ 245 (655)
T PRK03584 176 QGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALP---SLEHVVVVPYLGPA----A---AAAALPGALLWED 245 (655)
T ss_pred HHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCC---CccEEEEEecCCCc----c---cccccCCcccHHH
Confidence 999999999999999997643 223333332222 12344444322100 0 0000011234555
Q ss_pred hhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHH-HHhcccccccCCCCEEEEecCchhhhhhhHHHH
Q 008636 172 MLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFII-AVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250 (558)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~ 250 (558)
+............+...+++++|+|||||||.||||+++|++++.. .......+.+.++|++++..++.|..+ ..++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~~~ 324 (655)
T PRK03584 246 FLAPAEAAELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHCDLGPGDRFFWYTTCGWMMW-NWLVS 324 (655)
T ss_pred HhhccccCCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhcCCCCCCEEEEcCCchHHhH-HHHHH
Confidence 5542222111223456789999999999999999999999987644 334445567889999999999887654 34668
Q ss_pred HHHhcceEEEecC----CCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc----cccCCCCceEEEEecCCCChhhhHHhh
Q 008636 251 AAVVGATNVCLRK----FDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP----EAKQLDRPVRILTAGSPPPAPVLLRTE 322 (558)
Q Consensus 251 ~l~~g~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~----~~~~~~~l~~v~~~g~~l~~~~~~~~~ 322 (558)
+++.|+++++.+. .++..+++.++++++|++.++|++++.+.+.. ....++++|.++++|+++++++.+++.
T Consensus 325 ~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i~~~Ge~l~~~~~~~~~ 404 (655)
T PRK03584 325 GLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETHDLSALRTIGSTGSPLPPEGFDWVY 404 (655)
T ss_pred HHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccCChhheEEEEEecCCCCHHHHHHHH
Confidence 8999999999763 47999999999999999999999999987643 234678999999999999999999987
Q ss_pred h-c--CCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEe
Q 008636 323 S-L--GFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMR 399 (558)
Q Consensus 323 ~-~--~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~ 399 (558)
+ + ++.+.+.||+||+++....... ......+++|.|.+++ +++|+|+ +|.++ .+ +.|||+|+
T Consensus 405 ~~~~~~~~~~~~yG~TE~~~~~~~~~~----------~~~~~~g~~g~p~~g~-~~~ivd~-~g~~~-~g--~~GeL~v~ 469 (655)
T PRK03584 405 EHVKADVWLASISGGTDICSCFVGGNP----------LLPVYRGEIQCRGLGM-AVEAWDE-DGRPV-VG--EVGELVCT 469 (655)
T ss_pred HHhCCCceEEeccChHhhhcccccCCC----------CCCcCCCccCCCcCCc-eeEEECC-CCCCC-CC--CceEEEEc
Confidence 4 4 5789999999998653322110 0112346788999998 9999997 67777 55 78999999
Q ss_pred cc--cccccccCCchhhc--c-cc--cCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCccee
Q 008636 400 GG--SLMLGYLKDPEATS--K-CM--KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEA 472 (558)
Q Consensus 400 ~~--~~~~gy~~~~~~~~--~-~~--~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~ 472 (558)
|+ +++.|||++++.+. . .| .+|||+|||+|++|+||.+++.||+||+||++|.+|+|.+||++|.+||+|.++
T Consensus 470 gp~p~~~~gy~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~Ik~~G~rI~p~EIE~~l~~~p~V~ea 549 (655)
T PRK03584 470 KPFPSMPLGFWNDPDGSRYRDAYFDTFPGVWRHGDWIEITEHGGVVIYGRSDATLNRGGVRIGTAEIYRQVEALPEVLDS 549 (655)
T ss_pred cCCCCCcceeeCCCccchHHHhhhccCCCEeecCCeEEECCCCeEEEEeeccCeeecCcEEECHHHHHHHHHhCCCcceE
Confidence 96 78999999987432 1 12 268999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHhhcc
Q 008636 473 AVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSMS 552 (558)
Q Consensus 473 ~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~~~ 552 (558)
+|++.+++..++.++++|++.++.... ....++|.++++++|+++++|..|+++++||+|++||++|+.|++++.+..
T Consensus 550 ~vvg~~~~~~g~~~~a~vv~~~~~~~~--~~~~~~l~~~~~~~L~~~~~P~~i~~v~~lP~t~sGKi~r~~lr~~~~~~~ 627 (655)
T PRK03584 550 LVIGQEWPDGDVRMPLFVVLAEGVTLD--DALRARIRTTIRTNLSPRHVPDKIIAVPDIPRTLSGKKVELPVKKLLHGRP 627 (655)
T ss_pred EEEeeEcCCCCEEEEEEEEECCCCCCc--HHHHHHHHHHHHhhCCCCcCCCEEEECCCCCCCCCccchHHHHHHHHcCCC
Confidence 999999988899999999998764310 012368999999999999999999999999999999999999999987664
Q ss_pred c
Q 008636 553 M 553 (558)
Q Consensus 553 ~ 553 (558)
.
T Consensus 628 ~ 628 (655)
T PRK03584 628 V 628 (655)
T ss_pred C
Confidence 3
No 44
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=4.6e-67 Score=557.45 Aligned_cols=519 Identities=21% Similarity=0.277 Sum_probs=397.5
Q ss_pred CCChhhHHHHHhhcCCCCceEEEC-------C--ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHH
Q 008636 13 PLTPLGFIERAATACDDCPSIIYN-------D--TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFA 83 (558)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~-------~--~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA 83 (558)
..|+.++|++.++++|+++|+.+. + +++||+|+.+++.++|++|.++|+++||+|+|+++|+++|++++||
T Consensus 42 ~~t~~~~l~~~~~~~p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA 121 (660)
T PLN02861 42 IDSPWQFFSDAVKKYPNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (660)
T ss_pred CCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 358999999999999999999741 1 4799999999999999999999999999999999999999999999
Q ss_pred HhhcCcEEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCC
Q 008636 84 VPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPA 163 (558)
Q Consensus 84 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (558)
|+++|++++|+++.++.+++.+++++++++++|++.+....+......... ....++.++........ ......
T Consensus 122 ~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~~~~~~~~~~--~l~~ii~~~~~~~~~~~----~~~~~~ 195 (660)
T PLN02861 122 CNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKISSILSCLPKCSS--NLKTIVSFGDVSSEQKE----EAEELG 195 (660)
T ss_pred HHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHHHHHHHhhhhCCC--CCEEEEEECCCChhhhh----hhhcCC
Confidence 999999999999999999999999999999999987655544443332211 13344444321100000 000000
Q ss_pred CchhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccc-----cCCCCEEEEecC
Q 008636 164 DFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWV-----VPKQSVLLWTLP 238 (558)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~-----~~~~~~~~~~~p 238 (558)
.....+.++...+.... ...+..++|+++|+|||||||.||||++||+++..........+. +..+|++++.+|
T Consensus 196 ~~~~~~~~~~~~~~~~~-~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~lP 274 (660)
T PLN02861 196 VSCFSWEEFSLMGSLDC-ELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEEDSYFSYLP 274 (660)
T ss_pred cEEEEHHHHHHhCcccC-CCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCCCEEEEECc
Confidence 11234555544332211 112346789999999999999999999999999876655443332 467899999999
Q ss_pred chhhhhhhHHHHHHHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcC------------------------
Q 008636 239 MFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSS------------------------ 294 (558)
Q Consensus 239 ~~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~------------------------ 294 (558)
++|..++...+.+++.|+++++.. .++..+++.+++++||+++++|.+++.+.+.
T Consensus 275 l~H~~~~~~~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~ 353 (660)
T PLN02861 275 LAHVYDQVIETYCISKGASIGFWQ-GDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGMLRKKLFDFAYNYKL 353 (660)
T ss_pred HHHHHHHHHHHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 999999866667889999988874 5899999999999999999999999988641
Q ss_pred -------------ccc---------cCC-CCceEEEEecCCCChhhhHHhhhcC-CeeeecccCCCCCCcccccCCCCCC
Q 008636 295 -------------PEA---------KQL-DRPVRILTAGSPPPAPVLLRTESLG-FIVSHGYGKTEIAGVNVSCAWKPKW 350 (558)
Q Consensus 295 -------------~~~---------~~~-~~l~~v~~~g~~l~~~~~~~~~~~~-~~v~~~YG~tE~g~~~~~~~~~~~~ 350 (558)
+.. ..+ +++|.+++||+++++++.+.++.++ ..+++.||+||+++.++.....
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~--- 430 (660)
T PLN02861 354 GNLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVEEFLRVTSCSVLSQGYGLTESCGGCFTSIAN--- 430 (660)
T ss_pred HHHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHcCCCeeEecchhhhhhceeecccc---
Confidence 000 012 5789999999999999866555555 4799999999987655432210
Q ss_pred CCCChhhhhhhcccCCceecccceeeEeCC-CCC-cccCCCCCeeeEEEEecccccccccCCchhhcccccCCceeeCce
Q 008636 351 NKLPARERASLKARQGVRTIGLTEVDIVDP-ETG-LSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDV 428 (558)
Q Consensus 351 ~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~-~~~-~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~ 428 (558)
.....+++|.|.+++ +++|+|. ++| ..+..+ ..|||+++|++++.|||++|+.+.+.|.+|||+|||+
T Consensus 431 -------~~~~~gsvG~p~p~~-ev~i~d~~~~g~~~~~~~--~~GEi~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDl 500 (660)
T PLN02861 431 -------VFSMVGTVGVPMTTI-EARLESVPEMGYDALSDV--PRGEICLRGNTLFSGYHKRQDLTEEVLIDGWFHTGDI 500 (660)
T ss_pred -------cCCCCCCccCccCce-EEEEEEccccCcccCCCC--CceeEEEcCCcccccccCCHHHHHhhhhccCcccCce
Confidence 011246899999998 9999972 333 222333 5699999999999999999999999999999999999
Q ss_pred eEEccCCcEEEecccCCeeee-CceeechHHHHHHHhcCCCcceeEEEeeeCCCCCceeEEEEEecCCCC-----CCCCC
Q 008636 429 GMMHPDGYLEIKDRSKDVIIS-GGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTD-----SGGMM 502 (558)
Q Consensus 429 ~~~~~~g~l~~~GR~~d~i~~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~-----~~~~~ 502 (558)
|++|+||++++.||+||+||. +|++|+|.+||++|.++|.|.+++|++.+ .++.++++|++....- ..+..
T Consensus 501 g~~d~dG~l~i~GR~kd~Ik~~~G~~I~p~eIE~~l~~~p~V~~a~V~G~~---~~~~~~A~vv~~~~~l~~~~~~~~~~ 577 (660)
T PLN02861 501 GEWQPNGAMKIIDRKKNIFKLSQGEYVAVENLENTYSRCPLIASIWVYGNS---FESFLVAVVVPDRQALEDWAANNNKT 577 (660)
T ss_pred EEECCCCcEEEEeccccceEcCCCeEEcHHHHHHHHhcCCCeeEEEEEecC---CcceeEEEEEcCHHHHHHHHHHcCCC
Confidence 999999999999999999995 89999999999999999999999999976 2456889988763310 00000
Q ss_pred CC----------HHHHHHHHHh-----cCCCccccCeEEEec-cc-----CCCCCCcchhHHHHHHHhhccccc
Q 008636 503 TT----------EKDIIQYCRA-----RIPRYMVPKTVVFID-EL-----PKTATGKVQKYVLGDIANSMSMSH 555 (558)
Q Consensus 503 ~~----------~~~l~~~~~~-----~l~~~~~p~~i~~v~-~~-----P~t~~GK~~r~~l~~~~~~~~~~~ 555 (558)
.. ...+.+.+++ .++.+..++.+.+++ +| .+|+++|+.|..+.+.|++.+..-
T Consensus 578 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~i~~~~l~~~~ft~~ng~lT~t~K~~R~~i~~~y~~~I~~l 651 (660)
T PLN02861 578 GDFKSLCKNLKARKYILDELNSTGKKLQLRGFEMLKAIHLEPNPFDIERDLITPTFKLKRPQLLKYYKDCIDQL 651 (660)
T ss_pred CCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCcccCcCCHHHhhhHHHHHHHHHHHHHHH
Confidence 01 1223444432 488899999888865 46 799999999999999999877643
No 45
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2e-66 Score=543.64 Aligned_cols=509 Identities=21% Similarity=0.304 Sum_probs=409.4
Q ss_pred CCCChhhHHHHHhhcCCCCceEEECC--ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCc
Q 008636 12 CPLTPLGFIERAATACDDCPSIIYND--TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGA 89 (558)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~~--~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 89 (558)
...++.++|+++++++|+++|+++.+ +.+||+||.+++.++|++|.+.|+++||+|+|+++|++++++++|||+++|+
T Consensus 14 ~~~~l~~~l~~~a~~~p~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 93 (534)
T PRK05852 14 FGPRIADLVEVAATRLPEAPALVVTADRIAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNAEFVVALLAASRADL 93 (534)
T ss_pred hcccHHHHHHHHHHhCCCCcEEEecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCc
Confidence 34579999999999999999998744 5799999999999999999999999999999999999999999999999999
Q ss_pred EEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhH
Q 008636 90 IFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTY 169 (558)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (558)
+++++++.++.+.+.++++.++++++|++............ ......+.+...... ..... ...+
T Consensus 94 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~------~~~~~----~~~~ 158 (534)
T PRK05852 94 VVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRAEPTT-----RWWPLTVNVGGDSGP------SGGTL----SVHL 158 (534)
T ss_pred EEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhccccc-----cccceeeeecccccc------ccccc----cccc
Confidence 99999999999999999999999999997643321111000 000111111111100 00000 0000
Q ss_pred HHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhhh-HH
Q 008636 170 ENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWS-FT 248 (558)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~-~~ 248 (558)
.... .... .........++.++++|||||||.||+|.++|+++..........+.+..+|++++..|++|..++. .+
T Consensus 159 ~~~~-~~~~-~~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~ 236 (534)
T PRK05852 159 DAAT-EPTP-ATSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGYRLSPRDATVAVMPLYHGHGLIAAL 236 (534)
T ss_pred cccc-CCCc-cccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCcceEEEecCcchhHHHHHHH
Confidence 0000 0000 0001112246889999999999999999999999988777776777888999999999999999884 57
Q ss_pred HHHHHhcceEEEec--CCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCccc----cCCCCceEEEEecCCCChhhhHHhh
Q 008636 249 WGAAVVGATNVCLR--KFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA----KQLDRPVRILTAGSPPPAPVLLRTE 322 (558)
Q Consensus 249 ~~~l~~g~~~~~~~--~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~----~~~~~l~~v~~~g~~l~~~~~~~~~ 322 (558)
+.++..|+++++.. .+++..+++.++++++|+++++|+++..|.+.... ...+++|.+.++|+++++.+++.+.
T Consensus 237 ~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~G~~~~~~~~~~~~ 316 (534)
T PRK05852 237 LATLASGGAVLLPARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEPSGRKPAALRFIRSCSAPLTAETAQALQ 316 (534)
T ss_pred HHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhcccccccccCCCeeEEEECCCCCCHHHHHHHH
Confidence 77788888877754 47899999999999999999999999999876532 2467899999999999999999988
Q ss_pred -hcCCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecc
Q 008636 323 -SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGG 401 (558)
Q Consensus 323 -~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~ 401 (558)
.++..+++.||+||++.+++.+....... ........+..|. .+++ +++++|+ ++++++++ +.|||+++|+
T Consensus 317 ~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~---~~~~~~~~g~~g~-~~g~-~~~i~d~-~g~~~~~g--~~Gel~v~g~ 388 (534)
T PRK05852 317 TEFAAPVVCAFGMTEATHQVTTTQIEGIGQ---TENPVVSTGLVGR-STGA-QIRIVGS-DGLPLPAG--AVGEVWLRGT 388 (534)
T ss_pred HHhCCChhhccCccccchhhhcCCcccccc---ccCcccccccCCC-CCCC-eEEEECC-CCCCCCCC--CceEEEEecC
Confidence 56999999999999987665432211000 0000011223343 5777 9999998 67888887 7899999999
Q ss_pred cccccccCCchhhcccccCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCCC
Q 008636 402 SLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481 (558)
Q Consensus 402 ~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~ 481 (558)
.++.||+++++.+...|.+|||+|||+|++|+||++++.||++|+|+.+|.+|+|.+||++|.++|+|.+++|++.+++.
T Consensus 389 ~v~~gY~~~~~~t~~~~~~g~~~TGD~~~~d~dG~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~V~~~~v~g~~~~~ 468 (534)
T PRK05852 389 TVVRGYLGDPTITAANFTDGWLRTGDLGSLSAAGDLSIRGRIKELINRGGEKISPERVEGVLASHPNVMEAAVFGVPDQL 468 (534)
T ss_pred cccchhcCCcccchhhhcCCCcccCceEEEeCCCcEEEEecchhhEEECCEEECHHHHHHHHHhCCCeeeEEEEecCCcC
Confidence 99999999999999889999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHhh
Q 008636 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANS 550 (558)
Q Consensus 482 ~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~ 550 (558)
.++.++++++..+... .+.+++.++++++|+.+++|..++++++||+|++||++|++|++.|..
T Consensus 469 ~g~~~~~~vv~~~~~~-----~~~~~i~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~L~~~~~~ 532 (534)
T PRK05852 469 YGEAVAAVIVPRESAP-----PTAEELVQFCRERLAAFEIPASFQEASGLPHTAKGSLDRRAVAEQFGH 532 (534)
T ss_pred cCceEEEEEEECCCCC-----CCHHHHHHHHHHhcccccCCeEEEEhhhcCCCCCccccHHHHHHHhcc
Confidence 8899999988766543 578899999999999999999999999999999999999999998853
No 46
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.3e-67 Score=562.67 Aligned_cols=479 Identities=19% Similarity=0.270 Sum_probs=399.6
Q ss_pred ChhhHHHHHhhc--CCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEE
Q 008636 15 TPLGFIERAATA--CDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFN 92 (558)
Q Consensus 15 tl~~~l~~~a~~--~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (558)
|+.++|.+++.. +|+++|+... ..+||+||.++++++|+.|.+.|+++|++|+|+++|++++++++|||+++|++++
T Consensus 5 ~~~~~~~~~a~~~~~pd~~a~~~~-~~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~aG~~~v 83 (705)
T PRK06060 5 NLAGLLAEQASEAGWYDRPAFYAA-DVVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQLLLACLARGVMAF 83 (705)
T ss_pred CHHHHHHHHHhhccCCCceEEEec-CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEE
Confidence 788999998876 7999999875 4899999999999999999999999999999999999999999999999999999
Q ss_pred eccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhHHHh
Q 008636 93 TINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENM 172 (558)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (558)
|++|.++.+++..+++.++++++|++.+....+... .+. . ...+
T Consensus 84 pi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-----------~~~--~-----------------------~~~~ 127 (705)
T PRK06060 84 LANPELHRDDHALAARNTEPALVVTSDALRDRFQPS-----------RVA--E-----------------------AAEL 127 (705)
T ss_pred ecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhccc-----------ccc--h-----------------------hhhh
Confidence 999999999999999999999999976543222110 000 0 0000
Q ss_pred hcCC-CCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcc-cccccCCCCEEEEecCchhhhhh-hHHH
Q 008636 173 LAKG-DPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSL-IDWVVPKQSVLLWTLPMFHNNGW-SFTW 249 (558)
Q Consensus 173 ~~~~-~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~g~-~~~~ 249 (558)
+... ........+..++++++++|||||||.||+|.++|+++........ ..+.+...+++++..|++|..++ ..++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 207 (705)
T PRK06060 128 MSEAARVAPGGYEPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKALRLTPEDTGLCSARMYFAYGLGNSVW 207 (705)
T ss_pred hhhccccCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhhCCCCcceeEEeccchhhcchhHHHH
Confidence 0000 0000011224567999999999999999999999999876654432 35678889999999999998887 4577
Q ss_pred HHHHhcceEEEec-CCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCccccCCCCceEEEEecCCCChhhhHHhhh-c-CC
Q 008636 250 GAAVVGATNVCLR-KFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAGSPPPAPVLLRTES-L-GF 326 (558)
Q Consensus 250 ~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~~l~~v~~~g~~l~~~~~~~~~~-~-~~ 326 (558)
.++..|+++++.+ .+++..++..++++++|+++++|+++..+++......++++|.+++||+++++++.+++.+ + ++
T Consensus 208 ~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~slr~i~~gGe~l~~~~~~~~~~~~~~~ 287 (705)
T PRK06060 208 FPLATGGSAVINSAPVTPEAAAILSARFGPSVLYGVPNFFARVIDSCSPDSFRSLRCVVSAGEALELGLAERLMEFFGGI 287 (705)
T ss_pred HHHhcCCEEEEeCCCCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhcccccccceeEEEEecCcCCHHHHHHHHHHcCCC
Confidence 8899999999887 4788889999999999999999999999987665556789999999999999999999884 4 58
Q ss_pred eeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEeccccccc
Q 008636 327 IVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLG 406 (558)
Q Consensus 327 ~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~g 406 (558)
++++.||+||++..+..+... .....++|.|.+++ +++|+|+ ++.+++.| +.|||+|+|++++.|
T Consensus 288 ~~~~~YG~tE~~~~~~~~~~~-----------~~~~~~iG~p~~~~-~v~i~d~-~g~~~~~g--~~GEl~i~g~~v~~G 352 (705)
T PRK06060 288 PILDGIGSTEVGQTFVSNRVD-----------EWRLGTLGRVLPPY-EIRVVAP-DGTTAGPG--VEGDLWVRGPAIAKG 352 (705)
T ss_pred ceEeeeeccccCceEEeccCC-----------CCCcCcccccCCCc-EEEEECC-CCCCCCCC--CceEEEEccchhhhh
Confidence 999999999998655433210 11235789999998 9999998 67788887 789999999999999
Q ss_pred ccCCchhhcccccCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCCCCCcee
Q 008636 407 YLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486 (558)
Q Consensus 407 y~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~ 486 (558)
|+++++.+.. .+|||+|||+|++++||++++.||+||+||++|++|+|.+||+.|.++++|.+++|++.+++..++.+
T Consensus 353 Y~~~~~~~~~--~~~~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~a~vv~~~~~~~~~~~ 430 (705)
T PRK06060 353 YWNRPDSPVA--NEGWLDTRDRVCIDSDGWVTYRCRADDTEVIGGVNVDPREVERLIIEDEAVAEAAVVAVRESTGASTL 430 (705)
T ss_pred hhCCCccccc--CCCcEECCeeEEECCCceEEEecccCceEEECCEEECHHHHHHHHHhCCCeeEEEEEeecCccCCeeE
Confidence 9999886533 47899999999999999999999999999999999999999999999999999999999988888889
Q ss_pred EEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHh
Q 008636 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIAN 549 (558)
Q Consensus 487 ~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~ 549 (558)
+++++...+.... .....+++++++++|+.|++|..|+++++||+|++||++|++|++.+.
T Consensus 431 ~a~vv~~~~~~~~--~~~~~~i~~~l~~~L~~~~~P~~i~~v~~iP~t~~GKidr~~L~~~~~ 491 (705)
T PRK06060 431 QAFLVATSGATID--GSVMRDLHRGLLNRLSAFKVPHRFAVVDRLPRTPNGKLVRGALRKQSP 491 (705)
T ss_pred EEEEEeccccCcC--hHHHHHHHHHHHHhCCCCcCCcEEEEeecCCCCcchhhHHHHHHhhcc
Confidence 9999876553210 012357888999999999999999999999999999999999998753
No 47
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=3.5e-66 Score=542.87 Aligned_cols=504 Identities=26% Similarity=0.375 Sum_probs=417.2
Q ss_pred CCCChhhHHHHHhhcCCCCceEEEC--CccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCc
Q 008636 12 CPLTPLGFIERAATACDDCPSIIYN--DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGA 89 (558)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~--~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 89 (558)
..+|+.++|.+++..+|+++|+.+. ++.+||+||.+++.++|..|.+.|+++||+|+++++|++++++++|||+++|+
T Consensus 26 ~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 105 (546)
T PLN02330 26 DKLTLPDFVLQDAELYADKVAFVEAVTGKAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEYGIVALGIMAAGG 105 (546)
T ss_pred CCCcHHHHHhhhhhcCCCccEEEecCCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCc
Confidence 3578999999999999999999874 57999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhH
Q 008636 90 IFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTY 169 (558)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (558)
+++|+++..+.+++..+++.++++++|+++.....+... ...++.+...... ....|
T Consensus 106 ~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~---------~~~~i~~~~~~~~--------------~~~~~ 162 (546)
T PLN02330 106 VFSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGL---------GLPVIVLGEEKIE--------------GAVNW 162 (546)
T ss_pred EeccCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhc---------CCcEEEecCCCCC--------------CcccH
Confidence 999999999999999999999999999998766555332 1123333221100 01334
Q ss_pred HHhhcCCCCC--CCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccc--cCCCCEEEEecCchhhhhh
Q 008636 170 ENMLAKGDPQ--FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWV--VPKQSVLLWTLPMFHNNGW 245 (558)
Q Consensus 170 ~~~~~~~~~~--~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~p~~~~~g~ 245 (558)
.+++...... ........++++++++|||||||.||+|.++|+++............ ....++.+..+|++|.+++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~ 242 (546)
T PLN02330 163 KELLEAADRAGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSVGPEMIGQVVTLGLIPFFHIYGI 242 (546)
T ss_pred HHHHhhccccCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhccCccccCceEEEEecChHHHHHH
Confidence 4444332211 11112345679999999999999999999999998765543221111 2234678999999999887
Q ss_pred h-HHHHHHHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCcc--ccCCC--CceEEEEecCCCChhhhHH
Q 008636 246 S-FTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE--AKQLD--RPVRILTAGSPPPAPVLLR 320 (558)
Q Consensus 246 ~-~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~--~~~~~--~l~~v~~~g~~l~~~~~~~ 320 (558)
. .++.++..|+++++.+.+++..+++.++++++|++.++|+++..+.+... ...+. .++.++++|+++++.++++
T Consensus 243 ~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~i~~~g~~l~~~~~~~ 322 (546)
T PLN02330 243 TGICCATLRNKGKVVVMSRFELRTFLNALITQEVSFAPIVPPIILNLVKNPIVEEFDLSKLKLQAIMTAAAPLAPELLTA 322 (546)
T ss_pred HHHHHHHhhcCCEEEEecccCHHHHHHHHHHcCCeeeecCCHHHHHHHhCccccccccchheeeeEEEcCCcCCHHHHHH
Confidence 4 56778889999999999999999999999999999999999999987642 22233 4789999999999999999
Q ss_pred hh-hc-CCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEE
Q 008636 321 TE-SL-GFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVM 398 (558)
Q Consensus 321 ~~-~~-~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v 398 (558)
+. .+ ++++++.||+||++.++..+..... ........++|.|.+++ +++|+|++++.+++.| +.|||++
T Consensus 323 ~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~------~~~~~~~~~vG~~~~~~-~v~i~d~~~~~~~p~g--~~Gel~v 393 (546)
T PLN02330 323 FEAKFPGVQVQEAYGLTEHSCITLTHGDPEK------GHGIAKKNSVGFILPNL-EVKFIDPDTGRSLPKN--TPGELCV 393 (546)
T ss_pred HHHHcCCCeEEecccccccccceecCCCccc------cccccccCccccccCCc-EEEEEeCCCCccCCCC--CceEEEE
Confidence 98 45 8999999999999866544321110 00112345789999998 9999997788888888 7899999
Q ss_pred ecccccccccCCchhhcccc-cCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEee
Q 008636 399 RGGSLMLGYLKDPEATSKCM-KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477 (558)
Q Consensus 399 ~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~ 477 (558)
+|+.++.||++++..+...+ .+|||+|||+|++++||.+++.||.+|+|+.+|++|+|.+||+.|.++++|.+++|+++
T Consensus 394 ~g~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~ 473 (546)
T PLN02330 394 RSQCVMQGYYNNKEETDRTIDEDGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVPL 473 (546)
T ss_pred ecchhhhhhccCccchhhhccCCCceecccEEEEeCCCcEEEEechHHhhhcCCEEECHHHHHHHHHhCCchheEEEEec
Confidence 99999999999998877766 57999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHhhcc
Q 008636 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSMS 552 (558)
Q Consensus 478 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~~~ 552 (558)
+++..|+.++++|++.++.. .+.++++++++++|+.++.|+.+++++++|+|++||++|++|++++....
T Consensus 474 ~~~~~g~~~~a~v~~~~~~~-----~~~~~l~~~~~~~l~~~~~p~~~~~v~~iP~t~~GK~~r~~L~~~~~~~~ 543 (546)
T PLN02330 474 PDEEAGEIPAACVVINPKAK-----ESEEDILNFVAANVAHYKKVRVVQFVDSIPKSLSGKIMRRLLKEKMLSIN 543 (546)
T ss_pred cccccCceeEEEEEECCCCC-----CCHHHHHHHHHHhcccccCceEEEEeccCCCCCCcceeHHHHHHHHHhhh
Confidence 99888999999998876544 56788999999999999999999999999999999999999999997764
No 48
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.8e-66 Score=538.84 Aligned_cols=508 Identities=27% Similarity=0.351 Sum_probs=426.0
Q ss_pred CCCCChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcE
Q 008636 11 SCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAI 90 (558)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (558)
..+.|+.++|.++++++|+++|+++.++.+||+||.+.+.++|..|.+.|+++|++|+++++|++++++++|||+++|++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~~~~la~~~~G~~ 88 (524)
T PRK06188 9 HSGATYGHLLVSALKRYPDRPALVLGDTRLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVLMAIGAAQLAGLR 88 (524)
T ss_pred cCCccHHHHHHHHHHHCCCCeEEEECCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCE
Confidence 34569999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccccCChHHHHHHHhhcCccEEEEeCc-ChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhH
Q 008636 91 FNTINTRLDARTISIILKHSESKLVFVDHL-SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTY 169 (558)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (558)
+++++|..+.+.+..+++.++++++++++. ......+...... ...+++.+..... ...+
T Consensus 89 ~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~----------------~~~~ 149 (524)
T PRK06188 89 RTALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALALLARVP---SLKHVLTLGPVPD----------------GVDL 149 (524)
T ss_pred EEecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHHHhhhcC---CceEEEEeCCccc----------------hhhH
Confidence 999999999999999999999999999876 3333333222111 1223333322110 0111
Q ss_pred HHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhhhHHH
Q 008636 170 ENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTW 249 (558)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~ 249 (558)
.+....... ........++++++++|||||||.||+|.++|.++..........+.+..++++++..|++|..++. ++
T Consensus 150 ~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~-~~ 227 (524)
T PRK06188 150 LAAAAKFGP-APLVAAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEWEWPADPRFLMCTPLSHAGGAF-FL 227 (524)
T ss_pred HHhhhccCc-ccccccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCcEEEEecCchhhhhHH-HH
Confidence 111111111 1111123345799999999999999999999999998888877888889999999999999988874 56
Q ss_pred HHHHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc--cccCCCCceEEEEecCCCChhhhHHhh-hcCC
Q 008636 250 GAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRPVRILTAGSPPPAPVLLRTE-SLGF 326 (558)
Q Consensus 250 ~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~--~~~~~~~l~~v~~~g~~l~~~~~~~~~-~~~~ 326 (558)
.+++.|+++++.+..++..+++.++++++|++.++|+++..+++.. ....++++|.+++||++++++....+. .++.
T Consensus 228 ~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gg~~~~~~~~~~~~~~~~~ 307 (524)
T PRK06188 228 PTLLRGGTVIVLAKFDPAEVLRAIEEQRITATFLVPTMIYALLDHPDLRTRDLSSLETVYYGASPMSPVRLAEAIERFGP 307 (524)
T ss_pred HHHHcCCEEEEcCCCCHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCccCCCCcceeEEEEcCCCCCHHHHHHHHHHhCc
Confidence 7788999999999999999999999999999999999999998876 334577999999999999999887776 5688
Q ss_pred eeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEeccccccc
Q 008636 327 IVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLG 406 (558)
Q Consensus 327 ~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~g 406 (558)
.+++.||+||++..+..+..... .........++|.|.+++ .++|+|+ ++.+++.+ +.|||+++|+.++.|
T Consensus 308 ~~~~~YG~tE~~~~~~~~~~~~~-----~~~~~~~~~~~G~p~~g~-~v~i~~~-~~~~~~~g--~~Gel~v~~~~~~~g 378 (524)
T PRK06188 308 IFAQYYGQTEAPMVITYLRKRDH-----DPDDPKRLTSCGRPTPGL-RVALLDE-DGREVAQG--EVGEICVRGPLVMDG 378 (524)
T ss_pred hhhheeCccccCCceeecCchhc-----cccccccCCccccccCCc-EEEEEcC-CCCCCCCC--CeeEEEEECcchhhh
Confidence 89999999999766554432111 001123445789999998 9999997 58888877 789999999999999
Q ss_pred ccCCchhhcccccCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCCCCCcee
Q 008636 407 YLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486 (558)
Q Consensus 407 y~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~ 486 (558)
|++++..+...|.+|||+|||+++++++|.+++.||.+++|+.+|++|+|.+||++|.++++|.+++|++.+++..++.+
T Consensus 379 y~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~ 458 (524)
T PRK06188 379 YWNRPEETAEAFRDGWLHTGDVAREDEDGFYYIVDRKKDMIVTGGFNVFPREVEDVLAEHPAVAQVAVIGVPDEKWGEAV 458 (524)
T ss_pred hcCChHHhhhhhcCCceeecceEEEcCCccEEEEeccccceecCCEEECHHHHHHHHHhCCCeeEEEEEeccCCCcCceE
Confidence 99999998888889999999999999999999999999999999999999999999999999999999999888888899
Q ss_pred EEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHhhccc
Q 008636 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSMSM 553 (558)
Q Consensus 487 ~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~~~~ 553 (558)
++++++.+... ...+++++++++.++.+++|..++++++||+|++||++|++|++.+.+..+
T Consensus 459 ~~~v~~~~~~~-----~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~gKi~r~~L~~~~~~~~~ 520 (524)
T PRK06188 459 TAVVVLRPGAA-----VDAAELQAHVKERKGSVHAPKQVDFVDSLPLTALGKPDKKALRARYWEGRG 520 (524)
T ss_pred EEEEEECCCCC-----CCHHHHHHHHHHhcccCCCCcEEEEecCCCCCccccccHHHHHHHHHhhcc
Confidence 99998876544 577899999999999999999999999999999999999999999866544
No 49
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=7.8e-66 Score=538.23 Aligned_cols=496 Identities=24% Similarity=0.347 Sum_probs=410.6
Q ss_pred CCCChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEE
Q 008636 12 CPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIF 91 (558)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 91 (558)
...++.++|+++++.+|+++|+++.++++||+||.++++++|.+|.+.|+++|++|+++++|++++++++|||+++|+++
T Consensus 21 ~~~~l~~~~~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~ 100 (527)
T TIGR02275 21 QDKPLTDILRDQAARYPDAIAIICGNRQWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYIVFFALLKLGIAP 100 (527)
T ss_pred cCCcHHHHHHHHHHHCCCceEEEeCCceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHcCeEE
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccccCChHHHHHHHhhcCccEEEEeCcChH----HHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchh
Q 008636 92 NTINTRLDARTISIILKHSESKLVFVDHLSSS----LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVD 167 (558)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (558)
+++++..+.+++..+++.+++++++++..... .+....... ......++...... . . .
T Consensus 101 v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~------------~---~ 162 (527)
T TIGR02275 101 VLALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSK--LPTLRNIIVAGQTR-V------------E---A 162 (527)
T ss_pred eccccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhh--CCcceEEEEecCCC-C------------c---c
Confidence 99999999999999999999999999865321 111111110 00112222221110 0 0 0
Q ss_pred hHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhhh-
Q 008636 168 TYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWS- 246 (558)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~- 246 (558)
.....+....... ......++++++++|||||||.||+|.++|+++..........+.++.++++++.+|++|.+++.
T Consensus 163 ~~~~~~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~P~~h~~~~~~ 241 (527)
T TIGR02275 163 ELFLWLESPAEPV-KFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICWLTQQTRYLCALPAAHNYPLSS 241 (527)
T ss_pred hhhHHhhCcCccc-cCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCCEEEECCChHhhhhhhH
Confidence 0111111111111 11235678999999999999999999999999988777766677888999999999999998875
Q ss_pred -HHHHHHHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc--cccCCCCceEEEEecCCCChhhhHHhh-
Q 008636 247 -FTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRPVRILTAGSPPPAPVLLRTE- 322 (558)
Q Consensus 247 -~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~--~~~~~~~l~~v~~~g~~l~~~~~~~~~- 322 (558)
.++.++..|+++++.+.+++..+++.++++++|++.++|.++..+.+.. ....++++|.+++||++++.++...+.
T Consensus 242 ~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~ 321 (527)
T TIGR02275 242 PGALGVFYAGGCVVLAPDPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKSRYDLSSLKLLQVGGAKFSEAAARRVPA 321 (527)
T ss_pred HHHHHHHhcCCeEEECCCCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccCCCccceEEEEEcCCCCCHHHHHHHHH
Confidence 3788889999999888889999999999999999999999999988765 234567899999999999999999998
Q ss_pred hcCCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEeccc
Q 008636 323 SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGS 402 (558)
Q Consensus 323 ~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~ 402 (558)
.++.++++.||+||++....... .. ......++|.|.++...++++|+ +++.++.+ +.|||+++|+.
T Consensus 322 ~~g~~~~~~YG~tE~~~~~~~~~-~~---------~~~~~~~~G~~~~~~~~v~i~d~-~g~~~~~g--~~Gei~v~g~~ 388 (527)
T TIGR02275 322 VFGCQLQQVFGMAEGLVNYTRLD-DP---------AEIIFTTQGRPMSPDDEVRVVDD-HGNPVAPG--ETGMLLTRGPY 388 (527)
T ss_pred HhCCeEEeeeccCccCccccCCC-Cc---------cccccccCCCCCCCCceEEEECC-CCCCCCCC--CceEEEecCCc
Confidence 46999999999999653322111 00 01123578888864448999997 67888877 88999999999
Q ss_pred ccccccCCchhhcccc-cCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCCC
Q 008636 403 LMLGYLKDPEATSKCM-KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481 (558)
Q Consensus 403 ~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~ 481 (558)
++.||+++++.+...| .+|||+|||+|+++++|++++.||.+|+|+.+|.+|+|.+||+.|.++|+|.+++|++.+++.
T Consensus 389 ~~~gY~~~~~~~~~~~~~dg~~~TGDl~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~ 468 (527)
T TIGR02275 389 TFRGYYKAPEHNAAAFDAEGFYYTGDLVRLTPEGYIVVVGRAKDQINRGGEKIAAEEIENLLLAHPAVHDAALVSMPDEL 468 (527)
T ss_pred cchhhcCChhHhHhhcCcCCCEEcCceEEEcCCccEEEEecccceeecCCEEECHHHHHHHHHhCCCceEEEEEecCCcc
Confidence 9999999999887777 579999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhc-CCCccccCeEEEecccCCCCCCcchhHHHH
Q 008636 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRAR-IPRYMVPKTVVFIDELPKTATGKVQKYVLG 545 (558)
Q Consensus 482 ~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~-l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~ 545 (558)
.++.+++++++.++. .+..+++++++++ ++++++|..++++++||+|++||++|++|+
T Consensus 469 ~~~~~~a~vv~~~~~------~~~~~l~~~l~~~~l~~~~~P~~i~~v~~iP~t~sGKv~r~~L~ 527 (527)
T TIGR02275 469 LGEKSCAFIVVRDPA------LKAAQLRRFLRERGLAEYKLPDRVEFIDSLPLTAVGKIDKKALR 527 (527)
T ss_pred cccEEEEEEEECCCC------CCHHHHHHHHHhCCCccccCCCEEEEeccCCCCCccceeHHhcC
Confidence 889999999876652 5778999999975 999999999999999999999999999874
No 50
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.1e-66 Score=536.57 Aligned_cols=490 Identities=24% Similarity=0.301 Sum_probs=405.4
Q ss_pred CCCChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhC-CCCCCCEEEEEcCCchhHHHHHHHHhhcCcE
Q 008636 12 CPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSF-GINPGHVVSVIAPNIPAMYELHFAVPMSGAI 90 (558)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~-Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (558)
.+.++.++|++++. ++++|+.+.++.+||+||.+++.++|++|+++ |++++++|+++++|++++++++|||+++|++
T Consensus 3 ~~~~~~~~l~~~a~--~~~~a~~~~~~~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~ 80 (529)
T PRK07867 3 SAPTVAELLLPLAE--DDDRGLYFEDSFTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLGAAALSGIV 80 (529)
T ss_pred ccccHHHHHHHhcc--cCCceEEECCcEEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHhcCCE
Confidence 34579999988875 79999999999999999999999999999997 8999999999999999999999999999999
Q ss_pred EEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhHH
Q 008636 91 FNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYE 170 (558)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (558)
++|+++..+.+++..+++.++++++|++++....+.... . ...++.+.. ..+.
T Consensus 81 ~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~---~----~~~~~~~~~--------------------~~~~ 133 (529)
T PRK07867 81 PVGLNPTRRGAALARDIAHADCQLVLTESAHAELLDGLD---P----GVRVINVDS--------------------PAWA 133 (529)
T ss_pred EEEecCCCChHHHHHHHHhCCCeEEEECHhHHHHHHhhc---c----CceEEEecc--------------------ccHH
Confidence 999999999999999999999999999987665443321 0 112222211 1122
Q ss_pred HhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhhh-HHH
Q 008636 171 NMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWS-FTW 249 (558)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~-~~~ 249 (558)
+.+..............++++++++|||||||.||+|+++|+++..........+++..+|+++...|++|..++. .++
T Consensus 134 ~~l~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~ 213 (529)
T PRK07867 134 DELAAHRDAEPPFRVADPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRFGLGPDDVCYVSMPLFHSNAVMAGWA 213 (529)
T ss_pred HHhcccCCCCCCcccCCccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhhCCCcccEEEEecchhHHHHHHHHHH
Confidence 2222111111111235678999999999999999999999999987777777777888999999999999998874 456
Q ss_pred HHHHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCccc--cCCCCceEEEEecCCCChhhhHHhhhcCCe
Q 008636 250 GAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLDRPVRILTAGSPPPAPVLLRTESLGFI 327 (558)
Q Consensus 250 ~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~--~~~~~l~~v~~~g~~l~~~~~~~~~~~~~~ 327 (558)
.++..|+++++.+.+++..+++.++++++|++.++|+.+..++..... ...++++ +++||+.+++......+.++++
T Consensus 214 ~~l~~G~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~~~~~~~~lr-~~~gg~~~~~~~~~~~~~~g~~ 292 (529)
T PRK07867 214 VALAAGASIALRRKFSASGFLPDVRRYGATYANYVGKPLSYVLATPERPDDADNPLR-IVYGNEGAPGDIARFARRFGCV 292 (529)
T ss_pred HHHhcCceEEecCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCcccccccceE-EEecCCCChHHHHHHHHHhCCc
Confidence 678889999888888999999999999999999999999998776521 2234566 5568888877654434467999
Q ss_pred eeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCC----------CeeeEEE
Q 008636 328 VSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDG----------QTRGEIV 397 (558)
Q Consensus 328 v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~----------~~~Gel~ 397 (558)
+++.||+||++.....+. .....++|.+.++ ++++|++++..++.+. +..|||+
T Consensus 293 l~~~YG~TE~~~~~~~~~-------------~~~~~~~g~~~~~---~~i~~~~~~~~~~~g~~~~~~~~~~~~~~Gel~ 356 (529)
T PRK07867 293 VVDGFGSTEGGVAITRTP-------------DTPPGALGPLPPG---VAIVDPDTGTECPPAEDADGRLLNADEAIGELV 356 (529)
T ss_pred EEEeecccccccccccCC-------------CCCCCCcCCCCCC---EEEEECCCCCCCCCCccccccccccCCcceEEE
Confidence 999999999986544321 0123467888776 6777866777777762 1179999
Q ss_pred E-ecccccccccCCchhhcccccCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEe
Q 008636 398 M-RGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476 (558)
Q Consensus 398 v-~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~ 476 (558)
+ +|++++.||+++++.+...|.+|||+|||+|+++++|.+++.||.+|+|+.+|.+|+|.+||+.|.++|+|.+++|++
T Consensus 357 i~~g~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~~~V~g 436 (529)
T PRK07867 357 NTAGPGGFEGYYNDPEADAERMRGGVYWSGDLAYRDADGYAYFAGRLGDWMRVDGENLGTAPIERILLRYPDATEVAVYA 436 (529)
T ss_pred EecCCcccccccCChHhhhhhhcCCeEeeccEEEEeCCCcEEEeccccCeEEECCEEeCHHHHHHHHHhCCCeeEEEEEe
Confidence 9 999999999999999988889999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhc--CCCccccCeEEEecccCCCCCCcchhHHHHHHHhhcc
Q 008636 477 RPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRAR--IPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSMS 552 (558)
Q Consensus 477 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~--l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~~~ 552 (558)
.+++..|+.+++++++.++.. .+.++++++++++ |+++++|..++++++||+|++||++|+.|++++.+.-
T Consensus 437 ~~~~~~g~~~~a~vv~~~~~~-----~~~~~l~~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKv~r~~L~~~~~~~~ 509 (529)
T PRK07867 437 VPDPVVGDQVMAALVLAPGAK-----FDPDAFAEFLAAQPDLGPKQWPSYVRVCAELPRTATFKVLKRQLSAEGVDCA 509 (529)
T ss_pred ccCCCCCeeEEEEEEECCCCC-----CCHHHHHHHHHhhccCCcccCCeEEEEeeccCCCCCcceeHHHHHHhcCCCC
Confidence 999999999999999877654 6788899999865 9999999999999999999999999999999876543
No 51
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=1.2e-65 Score=539.72 Aligned_cols=507 Identities=26% Similarity=0.399 Sum_probs=421.4
Q ss_pred CCCCChhhHHHHHhhcCCCCceEEECC-ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCc
Q 008636 11 SCPLTPLGFIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGA 89 (558)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~~~-~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 89 (558)
+...|+.++|+++++.+|+++|+++.. +.+||+||++++.++|++|++.|+++||+|+++++|++++++++|||+++|+
T Consensus 20 ~~~~~l~~~~~~~~~~~pd~~a~~~~~~~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 99 (547)
T PRK06087 20 WGDASLADYWQQTARAMPDKIAVVDNHGASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEFTIIYLACLKVGA 99 (547)
T ss_pred CCCCCHHHHHHHHHHHCCCceEEEcCCCCEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCc
Confidence 345689999999999999999999865 7999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccccCChHHHHHHHhhcCccEEEEeCcC-----hHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCC
Q 008636 90 IFNTINTRLDARTISIILKHSESKLVFVDHLS-----SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPAD 164 (558)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (558)
+++|++|..+.+++..+++.+++++++++... .+.+.+...... ....++........ .
T Consensus 100 ~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~------~------- 163 (547)
T PRK06087 100 VSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLP---QLQQIVGVDKLAPA------T------- 163 (547)
T ss_pred EEeccchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHHHHhhCC---CCcEEEEeCCcCCC------c-------
Confidence 99999999999999999999999999997632 233333322221 12344444322100 0
Q ss_pred chhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhh
Q 008636 165 FVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNG 244 (558)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g 244 (558)
....+.++........ .......+++++|+|||||||.||+|.++|.++..........+++.+++++++..|++|.+|
T Consensus 164 ~~~~~~~~~~~~~~~~-~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g 242 (547)
T PRK06087 164 SSLSLSQIIADYEPLT-TAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPLGHATG 242 (547)
T ss_pred CccCHHHHhccCCccc-CCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeEEEecchHHHHH
Confidence 0123444433322211 122356789999999999999999999999999877766666677889999999999999998
Q ss_pred h-hHHHHHHHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc--cccCCCCceEEEEecCCCChhhhHHh
Q 008636 245 W-SFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRPVRILTAGSPPPAPVLLRT 321 (558)
Q Consensus 245 ~-~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~--~~~~~~~l~~v~~~g~~l~~~~~~~~ 321 (558)
+ ..++.+++.|+++++.+.+++..+++.++++++|+++++|..+..+++.. ....++++|.+++||+++++++...+
T Consensus 243 ~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~lr~i~~gG~~~~~~~~~~~ 322 (547)
T PRK06087 243 FLHGVTAPFLIGARSVLLDIFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQPADLSALRFFLCGGTTIPKKVAREC 322 (547)
T ss_pred HHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccCCCCCCCeEEEEEcCCCCCHHHHHHH
Confidence 7 45777888899999999899999999999999999998877776666654 33456799999999999999999988
Q ss_pred hhcCCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecc
Q 008636 322 ESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGG 401 (558)
Q Consensus 322 ~~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~ 401 (558)
...++++++.||+||++++........ ......+.|.+.++. .++++|+ ++.+++.+ +.|||+++|+
T Consensus 323 ~~~~~~l~~~YG~TE~~~~~~~~~~~~---------~~~~~~~~G~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~g~ 389 (547)
T PRK06087 323 QQRGIKLLSVYGSTESSPHAVVNLDDP---------LSRFMHTDGYAAAGV-EIKVVDE-ARKTLPPG--CEGEEASRGP 389 (547)
T ss_pred HHcCCcEEEEecccccCCccccCCCcc---------hhhcCCcCCccCCCc-eEEEEcC-CCCCCcCC--CcceEEEecc
Confidence 878999999999999988766433111 112234678899988 9999996 77888877 7899999999
Q ss_pred cccccccCCchhhcccc-cCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCC
Q 008636 402 SLMLGYLKDPEATSKCM-KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480 (558)
Q Consensus 402 ~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~ 480 (558)
+++.||+++++.+...+ .+|||+|||+++++++|.+++.||.+|+|+.+|++|+|.+||+.|.++++|.++++++.+++
T Consensus 390 ~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~~ 469 (547)
T PRK06087 390 NVFMGYLDEPELTARALDEEGWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSREVEDILLQHPKIHDACVVAMPDE 469 (547)
T ss_pred cccccccCCHHHHHHHhCCCCCcCcCceEEECCCCCEEEEecchhhhhcCCEEECHHHHHHHHHhCCCeeEEEEEecCCC
Confidence 99999999998887777 57999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCceeEEEEEecCCCCCCCCCCCHHHHHHHHH-hcCCCccccCeEEEecccCCCCCCcchhHHHHHHHhhc
Q 008636 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR-ARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSM 551 (558)
Q Consensus 481 ~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~-~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~~ 551 (558)
..|+.++++++..+.... ...+++.+++. ..++++++|..|.++++||+|.+||++|++|++++.+-
T Consensus 470 ~~g~~~~~~v~~~~~~~~----~~~~~~~~~~~~~~l~~~~~P~~i~~v~~iP~t~sGK~~r~~l~~~~~~~ 537 (547)
T PRK06087 470 RLGERSCAYVVLKAPHHS----LTLEEVVAFFSRKRVAKYKYPEHIVVIDKLPRTASGKIQKFLLRKDIMRR 537 (547)
T ss_pred CcCceEEEEEEECCCCCC----CCHHHHHHHHHhccccccCCCeEEEEeccCCCCCCCcCcHHHHHHHHHHH
Confidence 889999999988653211 56778888875 57999999999999999999999999999999987764
No 52
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=9.3e-66 Score=542.90 Aligned_cols=529 Identities=27% Similarity=0.401 Sum_probs=426.3
Q ss_pred CCCCCCChhhHHHHHhhcCCCCceEEECC---ccccHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCchhHHHHHHHH
Q 008636 9 ANSCPLTPLGFIERAATACDDCPSIIYND---TTYTWSQTYRRCLQLASSLSS-FGINPGHVVSVIAPNIPAMYELHFAV 84 (558)
Q Consensus 9 ~~~~~~tl~~~l~~~a~~~p~~~a~~~~~---~~~Ty~~l~~~v~~la~~L~~-~Gv~~gd~V~i~~~~~~~~~~~~lA~ 84 (558)
+.+.++|+.++|++++..+|++.|+++.+ +.+||+||.+++.++|.+|.+ .|+++||+|+++++|+++++++++||
T Consensus 5 ~~~~~~~~~~~l~~~a~~~~~~~a~~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~lA~ 84 (576)
T PRK05620 5 MQDVPLSLTRILEYGSTVHGDTTVTTWGGAEQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLFAV 84 (576)
T ss_pred hhcCCCcHHHHHHHHHHhCCCceEEEEcCCceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHH
Confidence 45667899999999999999999998753 789999999999999999996 79999999999999999999999999
Q ss_pred hhcCcEEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCC
Q 008636 85 PMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPAD 164 (558)
Q Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (558)
+++|+++++++|..+.+++.++++.++++++|+++.....+.+...... ....++........... .......
T Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~----~~~~~~~ 157 (576)
T PRK05620 85 ACMGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEILKECP---CVRAVVFIGPSDADSAA----AHMPEGI 157 (576)
T ss_pred HhcCCEEeecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHHHhhCc---cccEEEEecCcccccch----hcccccc
Confidence 9999999999999999999999999999999999887777666654432 12334433322111000 0000111
Q ss_pred chhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHh--cccccccCCCCEEEEecCchhh
Q 008636 165 FVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVD--SLIDWVVPKQSVLLWTLPMFHN 242 (558)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~p~~~~ 242 (558)
....|.++......... .....++++++++|||||||.||+|.++|+++...... ....+.+..++++++.+|++|.
T Consensus 158 ~~~~~~~l~~~~~~~~~-~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~ 236 (576)
T PRK05620 158 KVYSYEALLDGRSTVYD-WPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSLAVTHGESFLCCVPIYHV 236 (576)
T ss_pred ccccHHHHhhcCCCcCC-CCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhcCCCCCCeEEEeCChHHh
Confidence 13456666653322211 12356789999999999999999999999998654432 2234677889999999999999
Q ss_pred hhhhHHHHHHHhcceEEEec-CCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc--cccCCCCceEEEEecCCCChhhhH
Q 008636 243 NGWSFTWGAAVVGATNVCLR-KFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRPVRILTAGSPPPAPVLL 319 (558)
Q Consensus 243 ~g~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~--~~~~~~~l~~v~~~g~~l~~~~~~ 319 (558)
.++..++.++..|+++++.. .+++..+++.++++++|+++++|+++..++... ......++|.+++||+.+++.+.+
T Consensus 237 ~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~ 316 (576)
T PRK05620 237 LSWGVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNPPERMSLQEIYVGGSAVPPILIK 316 (576)
T ss_pred hhhHHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccCcccCceeEEEEcCCCCCHHHHH
Confidence 99988889999999998875 578999999999999999999999998887643 222345799999999999999999
Q ss_pred Hhh-hcCCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEE
Q 008636 320 RTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVM 398 (558)
Q Consensus 320 ~~~-~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v 398 (558)
.+. .+++++++.||+||++.++........ ...........++|.+.++. +++++|+ +..++...+..|||++
T Consensus 317 ~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~---~~~~~~~~~~~~~G~~~~~~-~~~i~~~--g~~~~~~~~~~Gel~v 390 (576)
T PRK05620 317 AWEERYGVDVVHVWGMTETSPVGTVARPPSG---VSGEARWAYRVSQGRFPASL-EYRIVND--GQVMESTDRNEGEIQV 390 (576)
T ss_pred HHHHHhCCceeeeccccccccceeeeccCCc---cccccccccccccCCcCCce-eEEEecC--CccccCCCCCceEEEE
Confidence 988 468999999999999876654332111 00011111234678888887 9999986 5555543336799999
Q ss_pred ecccccccccCCchhh----cc------------cc-cCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHH
Q 008636 399 RGGSLMLGYLKDPEAT----SK------------CM-KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIES 461 (558)
Q Consensus 399 ~~~~~~~gy~~~~~~~----~~------------~~-~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~ 461 (558)
+|++++.||+++++.+ .. .+ .+|||+|||++++++||.+++.||.+|+|+.+|.+|++.+||+
T Consensus 391 ~g~~~~~gY~~~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~i~~~eIE~ 470 (576)
T PRK05620 391 RGNWVTASYYHSPTEEGGGAASTFRGEDVEDANDRFTADGWLRTGDVGSVTRDGFLTIHDRARDVIRSGGEWIYSAQLEN 470 (576)
T ss_pred EcCcccccccCCccccccccccccccccchhhhcccccCCcEecCceEEEcCCceEEEEechhhhhhcCCEEEcHHHHHH
Confidence 9999999999998776 22 22 4789999999999999999999999999999999999999999
Q ss_pred HHhcCCCcceeEEEeeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchh
Q 008636 462 VLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541 (558)
Q Consensus 462 ~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r 541 (558)
.|.++|.|.+++|++.+++..|+.+++++++.++.... ....++++++++++|+++++|+.++++++||+|.+||++|
T Consensus 471 ~l~~~p~v~~~~vv~~~~~~~g~~~~a~v~~~~~~~~~--~~~~~~l~~~l~~~L~~~~~P~~i~~v~~~P~t~~GKv~r 548 (576)
T PRK05620 471 YIMAAPEVVECAVIGYPDDKWGERPLAVTVLAPGIEPT--RETAERLRDQLRDRLPNWMLPEYWTFVDEIDKTSVGKFDK 548 (576)
T ss_pred HHhcCCCceEEEEEeccCCCcCceeEEEEEecCCCCcc--cccHHHHHHHHHhhCccccCCeEEEEeccCCCCCcccCcH
Confidence 99999999999999999998889999999887764311 1457899999999999999999999999999999999999
Q ss_pred HHHHHHHhhccc
Q 008636 542 YVLGDIANSMSM 553 (558)
Q Consensus 542 ~~l~~~~~~~~~ 553 (558)
+.|++++++...
T Consensus 549 ~~L~~~~~~~~~ 560 (576)
T PRK05620 549 KDLRQHLADGDF 560 (576)
T ss_pred HHHHHHHhcCCc
Confidence 999999997653
No 53
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.7e-66 Score=539.72 Aligned_cols=518 Identities=25% Similarity=0.321 Sum_probs=417.5
Q ss_pred CCCCCChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCc
Q 008636 10 NSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGA 89 (558)
Q Consensus 10 ~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 89 (558)
....+++.++|.+.++.+|+++|++..++.+||+||.+++.++|+.|.+.|+++||+|+++++|++++++++|||+++|+
T Consensus 6 ~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~~~~la~~~~G~ 85 (540)
T PRK06164 6 APRADTLASLLDAHARARPDAVALIDEDRPLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWVVLFLACARLGA 85 (540)
T ss_pred ccCCCCHHHHHHHHHHhCCCCeEEecCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHHHHHHHHHHhCc
Confidence 33445899999999999999999999889999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccccCChHHHHHHHhhcCccEEEEeCcChH-HHHHHhhcCCCC--CCCCcEEEEcCCccccCCCCCCCCCCCCCch
Q 008636 90 IFNTINTRLDARTISIILKHSESKLVFVDHLSSS-LLLEVVSLFPPH--SKTPKLVLITDDKEISSSSSPPPRIPPADFV 166 (558)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (558)
+++|+++..+.+++.++++.++++++|++++... .+.+........ .....++.+....... +... .
T Consensus 86 ~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-----~ 155 (540)
T PRK06164 86 TVIAVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPPDALPPLRAIAVVDDAADAT-----PAPA-----P 155 (540)
T ss_pred EEEecCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccccccCCcceEEEeccCcccC-----CCCC-----c
Confidence 9999999999999999999999999999876422 111111111100 0122333333111000 0000 0
Q ss_pred hhHHHhhcCCCC---CCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhh
Q 008636 167 DTYENMLAKGDP---QFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243 (558)
Q Consensus 167 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 243 (558)
..+..+...... ..........+++++++|||||||.||+|.++|+++..........+++..++++++.+|++|..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~~~~ 235 (540)
T PRK06164 156 GARVQLFALPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAYGYDPGAVLLAALPFCGVF 235 (540)
T ss_pred ccccccccccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCCEEEEcCCchhHH
Confidence 001011110000 00001123467899999999999999999999999988887777778888999999999999999
Q ss_pred hhhHHHHHHHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcC-ccccCCCCceEEEEec-CCCChhhhHHh
Q 008636 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSS-PEAKQLDRPVRILTAG-SPPPAPVLLRT 321 (558)
Q Consensus 244 g~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~-~~~~~~~~l~~v~~~g-~~l~~~~~~~~ 321 (558)
|+..++.++..|+++++.+.+++..+++.++++++|+++++|+++..|.+. .....+++++.+..+| .+.......++
T Consensus 236 g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 315 (540)
T PRK06164 236 GFSTLLGALAGGAPLVCEPVFDAARTARALRRHRVTHTFGNDEMLRRILDTAGERADFPSARLFGFASFAPALGELAALA 315 (540)
T ss_pred HHHHHHHHHhcCceEEecCCCCHHHHHHHHHHhCCeeecCCHHHHHHHHHhhcccCCCcceeeeeeccCCcchHHHHHHH
Confidence 998899999999999999889999999999999999999999999999887 3555677888887766 45555666666
Q ss_pred hhcCCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecc
Q 008636 322 ESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGG 401 (558)
Q Consensus 322 ~~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~ 401 (558)
...++++++.||+||++++...+..... ........|.+..+...++|+|++++.+++.+ +.|||+++|+
T Consensus 316 ~~~~~~~~~~YG~tE~~~~~~~~~~~~~--------~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~g--~~Gel~v~g~ 385 (540)
T PRK06164 316 RARGVPLTGLYGSSEVQALVALQPATDP--------VSVRIEGGGRPASPEARVRARDPQDGALLPDG--ESGEIEIRAP 385 (540)
T ss_pred hhcCCceecceeeccccceeeccCCCCC--------CcceeccCccccCCCeEEEEecCCCCcCCCCC--CeeEEEEecc
Confidence 6568999999999999876654432111 11112345666533338999998888888887 7899999999
Q ss_pred cccccccCCchhhcccc-cCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCC
Q 008636 402 SLMLGYLKDPEATSKCM-KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480 (558)
Q Consensus 402 ~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~ 480 (558)
+++.||+++++.+...| .+|||+|||+|+++++|.+++.||.+|+|+.+|.+|+|.+||+.|.++++|.+++|++.+.
T Consensus 386 ~~~~gY~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~i~p~eIE~~l~~~~~v~~~~v~~~~~- 464 (540)
T PRK06164 386 SLMRGYLDNPDATARALTDDGYFRTGDLGYTRGDGQFVYQTRMGDSLRLGGFLVNPAEIEHALEALPGVAAAQVVGATR- 464 (540)
T ss_pred cccccccCCchhhhhcccCCCceecCCeEEEcCCceEEEEeecCCeEEECCEEcCHHHHHHHHHhCCCceeEEEEecCC-
Confidence 99999999999988887 5789999999999999999999999999999999999999999999999999999999874
Q ss_pred CCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCC---cchhHHHHHHHhhccc
Q 008636 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG---KVQKYVLGDIANSMSM 553 (558)
Q Consensus 481 ~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~G---K~~r~~l~~~~~~~~~ 553 (558)
..+..+++++++.++.. .+.+++.++++++++++++|..+++++++|+|++| |++|++|++++++...
T Consensus 465 ~~~~~~~~~vv~~~~~~-----~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~g~~~Ki~r~~L~~~~~~~~~ 535 (540)
T PRK06164 465 DGKTVPVAFVIPTDGAS-----PDEAGLMAACREALAGFKVPARVQVVEAFPVTESANGAKIQKHRLREMAQARLA 535 (540)
T ss_pred CCceeEEEEEEeCCCCC-----CCHHHHHHHHHhhcccCcCCcEEEEecCCCCCCCCccccccHHHHHHHHHHhhh
Confidence 34677888888876654 67889999999999999999999999999999998 9999999999887654
No 54
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=1.3e-65 Score=537.94 Aligned_cols=494 Identities=29% Similarity=0.426 Sum_probs=411.8
Q ss_pred CCChhhHHHHHhhcCCCCceEEEC------CccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhh
Q 008636 13 PLTPLGFIERAATACDDCPSIIYN------DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPM 86 (558)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~------~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~ 86 (558)
+.++.++|++.++.+|+++|+++. ++.+||+||++++.++|.+|.+.|+++|++|+++++|++++++++|||++
T Consensus 21 ~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~ 100 (538)
T TIGR03208 21 DRTINDHFDAAVANCPDKPALTAYRDGHGAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEFTALYLACAR 100 (538)
T ss_pred cCcHHHHHHHHHHHCCCceEEEeecccCCCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 458999999999999999999862 36899999999999999999999999999999999999999999999999
Q ss_pred cCcEEEeccccCChHHHHHHHhhcCccEEEEeCcCh-----HHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCC
Q 008636 87 SGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS-----SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIP 161 (558)
Q Consensus 87 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (558)
+|+++++++|..+.+++.++++.++++++++++... ....+...... ....++..+...
T Consensus 101 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~------------- 164 (538)
T TIGR03208 101 IGAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLP---ALRQVVVIDGDG------------- 164 (538)
T ss_pred cCEEEeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHhccCC---cceEEEEecCCC-------------
Confidence 999999999999999999999999999999987542 11122211111 123344433211
Q ss_pred CCCchhhHHHhhcCCCCC--C-----CCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEE
Q 008636 162 PADFVDTYENMLAKGDPQ--F-----SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLL 234 (558)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~ 234 (558)
...+..++...... . .......++++++++|||||||.||+|.++|+++..........+++..+++++
T Consensus 165 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l 240 (538)
T TIGR03208 165 ----DDSFDRVLMTPERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERLELGGGDVIL 240 (538)
T ss_pred ----CcCHHHHhhccccccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhcCCCCCCeEE
Confidence 01122221111000 0 001224578999999999999999999999999988777777777888899999
Q ss_pred EecCchhhhhh-hHHHHHHHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc--cccCCCCceEEEEecC
Q 008636 235 WTLPMFHNNGW-SFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRPVRILTAGS 311 (558)
Q Consensus 235 ~~~p~~~~~g~-~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~--~~~~~~~l~~v~~~g~ 311 (558)
+.+|++|..++ ..++.+++.|+++++.+.+++..+++.++++++|++.++|.++..+.... ....++++|.+++||+
T Consensus 241 ~~~pl~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~gG~ 320 (538)
T TIGR03208 241 MASPMAHQTGFMYGLMMPLILNATAVLQDIWNPARAAELIRETGVTFTMASTPFLTDLCRAVKESGAPVPSLFTFLCAGA 320 (538)
T ss_pred EeCCchhHHHHHHHHHHHHHcCCEEEecCccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccCCCCCcceEEEEcCC
Confidence 99999998886 55788899999999988889999999999999999999999999887654 2345779999999999
Q ss_pred CCChhhhHHhh-hcCCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCC
Q 008636 312 PPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDG 390 (558)
Q Consensus 312 ~l~~~~~~~~~-~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~ 390 (558)
++++.+.++++ .+++++++.||+||++++...+.... ......++|.+.+++ .++|+|+ ++.+++.+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~---------~~~~~~~~G~~~~g~-~v~i~~~-~~~~~~~g- 388 (538)
T TIGR03208 321 PIPGILVERAWELLGALIVSAWGMTENGAVTVTEPDDA---------LEKASTTDGRPLPGV-EVKVIDA-NGAKLSQG- 388 (538)
T ss_pred CCCHHHHHHHHHHcCCeEEeeeccCcCCCccccCcccc---------hhhccCcccccCCCC-EEEEECC-CCCCCcCC-
Confidence 99999999888 56899999999999987765443111 111234689999998 9999997 67888777
Q ss_pred CeeeEEEEecccccccccCCchhhcccccCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcc
Q 008636 391 QTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVN 470 (558)
Q Consensus 391 ~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~ 470 (558)
+.|||+++|+.++.||+++++.+.. ..+|||+|||+|+++++|.+++.||.+|+|+.+|++|+|.+||+.|.++++|.
T Consensus 389 -~~Gel~v~g~~~~~gy~~~~~~~~~-~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~~~~v~ 466 (538)
T TIGR03208 389 -ETGRLLVRGCSNFGGYLKRPHLNST-DAEGWFDTGDLAFQDAEGYIRINGRSKDVIIRGGENIPVVEIENLLYQHPAVA 466 (538)
T ss_pred -CCcEEEEecCcccccccCCcccccc-cCCCceeccceEEECCCCcEEEEeccCceEEECCEEECHHHHHHHHhcCccee
Confidence 7899999999999999999877643 36899999999999999999999999999999999999999999999999999
Q ss_pred eeEEEeeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHh-cCCCccccCeEEEecccCCCCCCcchhHHHH
Q 008636 471 EAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRA-RIPRYMVPKTVVFIDELPKTATGKVQKYVLG 545 (558)
Q Consensus 471 ~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~-~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~ 545 (558)
+++|++.+++..++.+++++++..+.. .+.+++.+++++ +++.+++|..+++++++|+|++||++|++|+
T Consensus 467 ~~~v~~~~~~~~g~~~~a~v~~~~~~~-----~~~~~l~~~~~~~~l~~~~~P~~i~~v~~iP~t~~gKv~r~~L~ 537 (538)
T TIGR03208 467 QVAIVAYPDERLGERACAVVVPKPGCT-----LDFAAMVAFLKAQKVALQYIPERLEVVDALPATPAGKIQKFRLR 537 (538)
T ss_pred eEEEEeccCCCCCceEEEEEEECCCCC-----CCHHHHHHHHHhcchhhccCCcEEEEeccCCCCCccccchHhhc
Confidence 999999998888899999999876544 677889999985 7999999999999999999999999999986
No 55
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=1.9e-66 Score=546.32 Aligned_cols=507 Identities=21% Similarity=0.249 Sum_probs=394.8
Q ss_pred CCCChhhHHHHHhhcCCCCceEEECCc----------cccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHH
Q 008636 12 CPLTPLGFIERAATACDDCPSIIYNDT----------TYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELH 81 (558)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~~~----------~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~ 81 (558)
..+|+.++|++.++++|+++|+++.+. .+||+||.+++.++|++|.+.|+++||+|+++++|++++++++
T Consensus 4 ~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~~~ 83 (552)
T PRK09274 4 SMANIARHLPRAAQERPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFALT 83 (552)
T ss_pred hhhhHHHHHHHHHHhCCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHHHH
Confidence 346889999999999999999998654 8999999999999999999999999999999999999999999
Q ss_pred HHHhhcCcEEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCC
Q 008636 82 FAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIP 161 (558)
Q Consensus 82 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (558)
|||+++|++++|++|.++.+++..++++++++++|++.+. .+......... .....++.+.... . .
T Consensus 84 la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~--~~~~~~~~~~~-~~~~~~i~~~~~~-~------~---- 149 (552)
T PRK09274 84 FALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKA--HLARRLFGWGK-PSVRRLVTVGGRL-L------W---- 149 (552)
T ss_pred HHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHH--HHHHHHhccCc-cchhheecccccc-c------c----
Confidence 9999999999999999999999999999999999986521 11111111000 0111222221110 0 0
Q ss_pred CCCchhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchh
Q 008636 162 PADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241 (558)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 241 (558)
....+.++...............++++++++|||||||.||+|.++|+++..........+++.++++.+..+|++|
T Consensus 150 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~~ 226 (552)
T PRK09274 150 ---GGTTLATLLRDGAAAPFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDYGIEPGEIDLPTFPLFA 226 (552)
T ss_pred ---CCccHHHhcccCccccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHhCCCCCceeeeccCHHH
Confidence 01123333211111111112345789999999999999999999999999887777777778889999999999987
Q ss_pred hhhhhHHHHHHHhcceEEEec-------CCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc--cccCCCCceEEEEecCC
Q 008636 242 NNGWSFTWGAAVVGATNVCLR-------KFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRPVRILTAGSP 312 (558)
Q Consensus 242 ~~g~~~~~~~l~~g~~~~~~~-------~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~--~~~~~~~l~~v~~~g~~ 312 (558)
..+ +..|+++++.+ .+++..+++.++++++|+++++|++++.|.+.. ....++++|.+++||++
T Consensus 227 ~~~-------~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~ 299 (552)
T PRK09274 227 LFG-------PALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEANGIKLPSLRRVISAGAP 299 (552)
T ss_pred hhh-------hhhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhcCCCCchhhEEEecCCc
Confidence 543 34577777653 357899999999999999999999999998765 23467899999999999
Q ss_pred CChhhhHHhhh-c--CCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCC--------
Q 008636 313 PPAPVLLRTES-L--GFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPE-------- 381 (558)
Q Consensus 313 l~~~~~~~~~~-~--~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~-------- 381 (558)
+++++.+.+.+ + ++++++.||+||+++++....... .+............++|.|.+++ +++|+|+.
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~-~~~~~~~~~~~~~~~vG~~~~~~-~~~ivd~~~~~~~~~~ 377 (552)
T PRK09274 300 VPIAVIERFRAMLPPDAEILTPYGATEALPISSIESREI-LFATRAATDNGAGICVGRPVDGV-EVRIIAISDAPIPEWD 377 (552)
T ss_pred CCHHHHHHHHHHcCCCceEEccccccccceeEeecchhh-hccccccccCCCCcccCccCCCc-eEEEEecccccccccc
Confidence 99999999985 4 579999999999987655432110 00000000011123689999998 99999853
Q ss_pred CCcccCCCCCeeeEEEEecccccccccCCchhhcccc---cCC--ceeeCceeEEccCCcEEEecccCCeeeeCceeech
Q 008636 382 TGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM---KDG--RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISS 456 (558)
Q Consensus 382 ~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~---~~g--~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~ 456 (558)
++.+++.+ +.|||+++|++++.|||++++.+...| .+| ||+|||+|++|+||.+++.||.+|+|+.+|.+|+|
T Consensus 378 ~~~~~~~g--~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~~~g~~w~~TGDlg~~d~dG~l~~~GR~~d~i~~~G~~v~p 455 (552)
T PRK09274 378 DALRLATG--EIGEIVVAGPMVTRSYYNRPEATRLAKIPDGQGDVWHRMGDLGYLDAQGRLWFCGRKAHRVETAGGTLYT 455 (552)
T ss_pred ccccCCCC--CeeEEEEecCcccccccCChHHhhhhhcccCCCCcEEEcCCEEEEccCCcEEEEeccCCeEEECCEEECc
Confidence 45667776 789999999999999999998887665 356 99999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCcceeEEEeeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCC---CccccCeEEEecccCC
Q 008636 457 TEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIP---RYMVPKTVVFIDELPK 533 (558)
Q Consensus 457 ~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~---~~~~p~~i~~v~~~P~ 533 (558)
.+||++|.++|+|.+++|++.+++. ++.++++|++.++.. ...+++.+.+++.+. .++.|..++++++||+
T Consensus 456 ~eIE~~l~~~p~V~~~~v~~~~~~~-~~~~~~~v~~~~~~~-----~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~lP~ 529 (552)
T PRK09274 456 IPCERIFNTHPGVKRSALVGVGVPG-AQRPVLCVELEPGVA-----CSKSALYQELRALAAAHPHTAGIERFLIHPSFPV 529 (552)
T ss_pred HHHHHHHHhCcccceeEEEEeCCCC-CceEEEEEEccCccc-----cchHHHhhhhHHHHHhcCCCcceeEEeccCCCCc
Confidence 9999999999999999999998764 667888888877643 344445555555444 3456788999999999
Q ss_pred C--CCCcchhHHHHHHHhhcc
Q 008636 534 T--ATGKVQKYVLGDIANSMS 552 (558)
Q Consensus 534 t--~~GK~~r~~l~~~~~~~~ 552 (558)
| ++||++|++|++++++..
T Consensus 530 t~~~~GKi~r~~L~~~~~~~~ 550 (552)
T PRK09274 530 DIRHNAKIFREKLAVWAAKQL 550 (552)
T ss_pred cccccccccHHHHHHHHHHhh
Confidence 9 799999999999987643
No 56
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=1.1e-65 Score=541.95 Aligned_cols=518 Identities=30% Similarity=0.445 Sum_probs=426.6
Q ss_pred CCCCCCCCChhhHHHHHhhcCCCCceEEE--CCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHH
Q 008636 7 NPANSCPLTPLGFIERAATACDDCPSIIY--NDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAV 84 (558)
Q Consensus 7 ~~~~~~~~tl~~~l~~~a~~~p~~~a~~~--~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~ 84 (558)
..++...++|.++|++.++.+|+++|+.+ .++.+||+||.+++.++|..|.+.|+++||+|+++++|++++++++|||
T Consensus 9 ~~~~~~~~~l~~~l~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~ 88 (559)
T PRK08315 9 TDVPLLEQTIGQLLDRTAARYPDREALVYRDQGLRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEWVLTQFAT 88 (559)
T ss_pred CcCChhhccHHHHHHHHHHHCCCCeEEEEcCCCeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHH
Confidence 34556667999999999999999999988 4578999999999999999999999999999999999999999999999
Q ss_pred hhcCcEEEeccccCChHHHHHHHhhcCccEEEEeCcChH-----HHHHHhhcCCCC----------CCCCcEEEEcCCcc
Q 008636 85 PMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS-----LLLEVVSLFPPH----------SKTPKLVLITDDKE 149 (558)
Q Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~-----~~~~~~~~~~~~----------~~~~~~~~~~~~~~ 149 (558)
+++|++++|++|..+.+++..+++.++++++|++++... .+.+........ .....++......
T Consensus 89 ~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 167 (559)
T PRK08315 89 AKIGAILVTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGDEK- 167 (559)
T ss_pred HHhCeEEEecCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCCCceeEEeecccC-
Confidence 999999999999999999999999999999999875421 122221111000 0011122221110
Q ss_pred ccCCCCCCCCCCCCCchhhHHHhhcCCCCC-----CCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccc
Q 008636 150 ISSSSSPPPRIPPADFVDTYENMLAKGDPQ-----FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLID 224 (558)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~ 224 (558)
......+.++....... .........+++++++|||||||.||+|.++|+++..........
T Consensus 168 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~ 234 (559)
T PRK08315 168 -------------HPGMLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEA 234 (559)
T ss_pred -------------CcccccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHh
Confidence 00012333333222110 111123457889999999999999999999999998877777777
Q ss_pred cccCCCCEEEEecCchhhhhh-hHHHHHHHhcceEEEe-cCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc--cccCC
Q 008636 225 WVVPKQSVLLWTLPMFHNNGW-SFTWGAAVVGATNVCL-RKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQL 300 (558)
Q Consensus 225 ~~~~~~~~~~~~~p~~~~~g~-~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~--~~~~~ 300 (558)
+++.++++++...|++|..++ ..++.++..|+++++. ..+++..+++.++++++|++.++|+++..++... ....+
T Consensus 235 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~~~~~~ 314 (559)
T PRK08315 235 MKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHPDFARFDL 314 (559)
T ss_pred cCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCcccCCCCc
Confidence 888999999999999999887 4577888899998854 4679999999999999999999999998887765 33457
Q ss_pred CCceEEEEecCCCChhhhHHhh-hcCC-eeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEe
Q 008636 301 DRPVRILTAGSPPPAPVLLRTE-SLGF-IVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIV 378 (558)
Q Consensus 301 ~~l~~v~~~g~~l~~~~~~~~~-~~~~-~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~ 378 (558)
+++|.++++|++++..+++.+. .++. ++++.||+||++.+++.+..... ......++|.|.++. .++|+
T Consensus 315 ~~lr~~~~~G~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~--------~~~~~~~vG~p~~~~-~v~i~ 385 (559)
T PRK08315 315 SSLRTGIMAGSPCPIEVMKRVIDKMHMSEVTIAYGMTETSPVSTQTRTDDP--------LEKRVTTVGRALPHL-EVKIV 385 (559)
T ss_pred hhhheeEecCCCCCHHHHHHHHHHcCCcceeEEEcccccccceeecCcccc--------hhhccCCCCccCCCc-EEEEE
Confidence 7999999999999999999887 4554 49999999999877665432211 112346889999998 99999
Q ss_pred CCCCCcccCCCCCeeeEEEEecccccccccCCchhhcccc-cCCceeeCceeEEccCCcEEEecccCCeeeeCceeechH
Q 008636 379 DPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM-KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISST 457 (558)
Q Consensus 379 d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~ 457 (558)
|+++++.++.+ +.|||+|+|++++.||++++..+...| .++||+|||+|+++++|.+++.||++|+|+.+|.+|++.
T Consensus 386 d~~~~~~~~~g--~~GEl~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~~~~~GR~d~~i~~~G~~v~~~ 463 (559)
T PRK08315 386 DPETGETVPRG--EQGELCTRGYSVMKGYWNDPEKTAEAIDADGWMHTGDLAVMDEEGYVNIVGRIKDMIIRGGENIYPR 463 (559)
T ss_pred cCccCCcCCCC--CceEEEEECchhhhhhcCChhHHhhcCCCCCCEEccceEEEcCCceEEEEeeccceEEECCEEEcHH
Confidence 99778888888 789999999999999999998888777 689999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCcceeEEEeeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCC
Q 008636 458 EIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537 (558)
Q Consensus 458 ~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~G 537 (558)
+||+.|.++++|.+++|++.+++..++.++++|++..+.. ...+++.+++.+.++.+++|..++++++||+|++|
T Consensus 464 eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~-----~~~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~G 538 (559)
T PRK08315 464 EIEEFLYTHPKIQDVQVVGVPDEKYGEEVCAWIILRPGAT-----LTEEDVRDFCRGKIAHYKIPRYIRFVDEFPMTVTG 538 (559)
T ss_pred HHHHHHHhCCCceEEEEEecCCCCCCeEEEEEEEeCCCCC-----CCHHHHHHHHHhhcccccCCcEEEEcccCCCCCCC
Confidence 9999999999999999999998887888999888876544 67789999999999999999999999999999999
Q ss_pred cchhHHHHHHHhhcccc
Q 008636 538 KVQKYVLGDIANSMSMS 554 (558)
Q Consensus 538 K~~r~~l~~~~~~~~~~ 554 (558)
|++|.+|++++.+....
T Consensus 539 K~~r~~L~~~~~~~~~~ 555 (559)
T PRK08315 539 KIQKFKMREMMIEELGL 555 (559)
T ss_pred ceeHHHHHHHHHhhhch
Confidence 99999999998876543
No 57
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=1.2e-65 Score=534.93 Aligned_cols=495 Identities=28% Similarity=0.406 Sum_probs=420.5
Q ss_pred CCChhhHHHHHhhcCCCCceEEE-CCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEE
Q 008636 13 PLTPLGFIERAATACDDCPSIIY-NDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIF 91 (558)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~-~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 91 (558)
+.++.+++..++ .+|+++|+.+ .++.+||+||.+++.++|..|.+.|+++||+|+++++|++++++++|||+++|+++
T Consensus 2 ~~~l~~~~~~~~-~~~~~~a~~~~~~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~~v~~la~~~~G~~~ 80 (504)
T PRK07514 2 NNNLFDALRAAF-ADRDAPFIETPDGLRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEALALYLATLRAGAVF 80 (504)
T ss_pred CccHHHHHHHHh-hCCCCeEEEeCCCCEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEE
Confidence 458999999999 9999999988 56789999999999999999999999999999999999999999999999999999
Q ss_pred EeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhHHH
Q 008636 92 NTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYEN 171 (558)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (558)
+++++..+.+++..+++.++++++++++.....+........ ...+..++.... ..+.+
T Consensus 81 v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-----------------~~~~~ 139 (504)
T PRK07514 81 LPLNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKIAAAAG----APHVETLDADGT-----------------GSLLE 139 (504)
T ss_pred EECCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHhhhccC----CceEEEecCCCc-----------------ccHHH
Confidence 999999999999999999999999998877666554433211 222333322110 01111
Q ss_pred hhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhhh-HHHH
Q 008636 172 MLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWS-FTWG 250 (558)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~-~~~~ 250 (558)
........ ........+++++++|||||||.||+|.++|+++..........+++..++++++..|++|..++. .++.
T Consensus 140 ~~~~~~~~-~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~ 218 (504)
T PRK07514 140 AAAAAPDD-FETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYWRFTPDDVLIHALPIFHTHGLFVATNV 218 (504)
T ss_pred hhhhcCcc-cCcccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCccEEEEecchHHHHHHHHHHHH
Confidence 11111111 111235678999999999999999999999999988877766677888999999999999998874 5678
Q ss_pred HHHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc--cccCCCCceEEEEecCCCChhhhHHhh-hcCCe
Q 008636 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRPVRILTAGSPPPAPVLLRTE-SLGFI 327 (558)
Q Consensus 251 ~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~--~~~~~~~l~~v~~~g~~l~~~~~~~~~-~~~~~ 327 (558)
+++.|+++++.+..++..+++.+. ++|++.++|.++..++... ....++++|.+++||+++++.+.+.+. .++.+
T Consensus 219 ~l~~G~~~~~~~~~~~~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~ 296 (504)
T PRK07514 219 ALLAGASMIFLPKFDPDAVLALMP--RATVMMGVPTFYTRLLQEPRLTREAAAHMRLFISGSAPLLAETHREFQERTGHA 296 (504)
T ss_pred HHhcCcEEEECCCCCHHHHHHHHH--hheeeecHHHHHHHHHcCCCCCcccccceeeEEecCCCCCHHHHHHHHHHhCCc
Confidence 889999999998889999999994 7999999999999998765 344577899999999999999999988 46889
Q ss_pred eeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecccccccc
Q 008636 328 VSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGY 407 (558)
Q Consensus 328 v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy 407 (558)
+++.||+||++....... .......++|.|.++. .++|+|++++.+++.+ +.|||+++|++++.||
T Consensus 297 ~~~~YG~tE~~~~~~~~~-----------~~~~~~~~~G~~~~~~-~v~i~d~~~~~~~~~g--~~Gel~i~~~~~~~gy 362 (504)
T PRK07514 297 ILERYGMTETNMNTSNPY-----------DGERRAGTVGFPLPGV-SLRVTDPETGAELPPG--EIGMIEVKGPNVFKGY 362 (504)
T ss_pred ceeecccccccccccCCc-----------cccccCcccccCCCCc-EEEEEECCCCCCCCCC--CceEEEEecCCccccc
Confidence 999999999886544321 1112235789999998 9999997789998887 7899999999999999
Q ss_pred cCCchhhccccc-CCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCCCCCcee
Q 008636 408 LKDPEATSKCMK-DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486 (558)
Q Consensus 408 ~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~ 486 (558)
+++++.+...|. +|||+|||+++++++|.+++.||+||+|+.+|.+|+|.+||+.+.++++|.+++|++.+++..++.+
T Consensus 363 ~~~~~~~~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~ 442 (504)
T PRK07514 363 WRMPEKTAEEFRADGFFITGDLGKIDERGYVHIVGRGKDLIISGGYNVYPKEVEGEIDELPGVVESAVIGVPHPDFGEGV 442 (504)
T ss_pred cCCchhhhhhcccCCCeeecceEEEcCCccEEEeccccceEEeCCeEECHHHHHHHHHhCCCeeEEEEEeCCCCCcCceE
Confidence 999998888884 8899999999999999999999999999999999999999999999999999999999888888889
Q ss_pred EEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHhhc
Q 008636 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSM 551 (558)
Q Consensus 487 ~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~~ 551 (558)
+++++..++.. .+.+++.+.++++++++++|..+++++++|+|++||++|.+|++++++.
T Consensus 443 ~~~~~~~~~~~-----~~~~~l~~~~~~~l~~~~~p~~i~~v~~~p~t~~gK~~r~~l~~~~~~~ 502 (504)
T PRK07514 443 TAVVVPKPGAA-----LDEAAILAALKGRLARFKQPKRVFFVDELPRNTMGKVQKNLLREQYADL 502 (504)
T ss_pred EEEEEECCCCC-----CCHHHHHHHHHhhcccCCCCcEEEEeccCCCCCCcceeHHHHHHHHHhh
Confidence 99998876554 5788999999999999999999999999999999999999999998865
No 58
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=1.4e-65 Score=547.45 Aligned_cols=509 Identities=19% Similarity=0.226 Sum_probs=393.4
Q ss_pred CChhh-HHHHHhhcCCCCceEEECC--------ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHH
Q 008636 14 LTPLG-FIERAATACDDCPSIIYND--------TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAV 84 (558)
Q Consensus 14 ~tl~~-~l~~~a~~~p~~~a~~~~~--------~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~ 84 (558)
.++.+ +|++++..+|+++|+++.+ +++||+||.+++.++|+.|+++|+++||+|+++++|++++++++|||
T Consensus 174 ln~~~~~l~~~~~~~pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~via~LA~ 253 (728)
T PLN03052 174 LNVAECCLTPKPSKTDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHAVIIYLAI 253 (728)
T ss_pred eEHHHHHHHHHhccCCCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHH
Confidence 34433 4666656789999999854 37999999999999999999999999999999999999999999999
Q ss_pred hhcCcEEEeccccCChHHHHHHHhhcCccEEEEeCcCh------HHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCC
Q 008636 85 PMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS------SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPP 158 (558)
Q Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (558)
+++|++++|++|+++.+++..++++++++++|+++... +....+.... ...++++........ .
T Consensus 254 ~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~-----~~~~iv~~~~~~~~~---~-- 323 (728)
T PLN03052 254 ILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAK-----APKAIVLPADGKSVR---V-- 323 (728)
T ss_pred HHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhc-----CCcEEEEeCCCCccc---c--
Confidence 99999999999999999999999999999999976432 1111211111 123333332110000 0
Q ss_pred CCCCCCchhhHHHhhcCCCC----CCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEE
Q 008636 159 RIPPADFVDTYENMLAKGDP----QFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLL 234 (558)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~ 234 (558)
.... ....|.+++..... ..........+++++|+|||||||.||||+++|.++..........+.+.++|+++
T Consensus 324 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~~l~~~d~~~ 401 (728)
T PLN03052 324 KLRE--GDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDIRKGDIVC 401 (728)
T ss_pred cccc--CCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhcCCCCCcEEE
Confidence 0000 02345555443211 00111123568999999999999999999999998766555444456788999999
Q ss_pred EecCchhhhhhhHHHHHHHhcceEEEecC-CCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc--cccCCCCceEEEEecC
Q 008636 235 WTLPMFHNNGWSFTWGAAVVGATNVCLRK-FDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRPVRILTAGS 311 (558)
Q Consensus 235 ~~~p~~~~~g~~~~~~~l~~g~~~~~~~~-~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~--~~~~~~~l~~v~~~g~ 311 (558)
+..|+.|+.+...++.++..|+++++.+. .++..++++++++++|++.++|++++.|.+.. ...+++++|.++++|+
T Consensus 402 ~~~~l~w~~g~~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~~~~dlssLr~i~s~Ge 481 (728)
T PLN03052 402 WPTNLGWMMGPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLDWSSIRCFGSTGE 481 (728)
T ss_pred ECCCcHHHhHHHHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCcccCChhheeEEEecCC
Confidence 99999999998778899999999999874 45678999999999999999999999997764 3446789999999999
Q ss_pred CCChhhhHHhhh-cC-CeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCC
Q 008636 312 PPPAPVLLRTES-LG-FIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRD 389 (558)
Q Consensus 312 ~l~~~~~~~~~~-~~-~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~ 389 (558)
+++++...++.. ++ .++.+.||.||+++........ .....+++|.|.++. +++|+|+ +|++++.+
T Consensus 482 ~l~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~----------~~~~~g~~g~p~~g~-~v~v~d~-~g~~v~~g 549 (728)
T PLN03052 482 ASSVDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGSLL----------QPQAFAAFSTPAMGC-KLFILDD-SGNPYPDD 549 (728)
T ss_pred CCCHHHHHHHHHhcCCCCeEeeccChhhCcccccCCCC----------CCCCCCccccCCCCc-eEEEECC-CCCCCCCC
Confidence 999998777663 34 5799999999997654332210 012345789999998 9999997 78888876
Q ss_pred CCeeeEEEEecc--cccccccCCchhhccccc-----CC--ceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHH
Q 008636 390 GQTRGEIVMRGG--SLMLGYLKDPEATSKCMK-----DG--RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIE 460 (558)
Q Consensus 390 ~~~~Gel~v~~~--~~~~gy~~~~~~~~~~~~-----~g--~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE 460 (558)
..+.|||++.++ +...+|+++.. ....|. .| ||+|||+++++++|.++++||+||+||++|.+|++.+||
T Consensus 550 ~~~~GEL~v~~~~~~~~~~~~~~~~-~~~yf~~~p~~~g~~~~~tGDl~~~d~dG~l~i~GR~Dd~I~~~G~rI~~~EIE 628 (728)
T PLN03052 550 APCTGELALFPLMFGASSTLLNADH-YKVYFKGMPVFNGKILRRHGDIFERTSGGYYRAHGRADDTMNLGGIKVSSVEIE 628 (728)
T ss_pred CCceEEEEEeCCCCCCCccccCchh-hhhhhhcCCCCCCCEEEecCceEEECCCCeEEEEecCCCEEeeCCEEeCHHHHH
Confidence 434699999865 23346666532 222231 23 899999999999999999999999999999999999999
Q ss_pred HHHh-cCCCcceeEEEeeeCCCCC-ceeEEEEEec--CCCCCCCCCCCHHHH----HHHHHhcCCCccccCeEEEecccC
Q 008636 461 SVLY-SHPMVNEAAVVGRPDPFWQ-EIPCAFVSLK--TGTDSGGMMTTEKDI----IQYCRARIPRYMVPKTVVFIDELP 532 (558)
Q Consensus 461 ~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~--~~~~~~~~~~~~~~l----~~~~~~~l~~~~~p~~i~~v~~~P 532 (558)
++|. .+|.|.+++|++++++..| +.++++|++. ++.. .+.++| .+.++++|+++..|+.|+++++||
T Consensus 629 ~~l~~~~p~V~eaaVvg~~d~~~g~e~~~afVvl~~~~g~~-----~~~~~L~~~i~~~i~~~l~~~~~p~~i~~v~~lP 703 (728)
T PLN03052 629 RVCNAADESVLETAAIGVPPPGGGPEQLVIAAVLKDPPGSN-----PDLNELKKIFNSAIQKKLNPLFKVSAVVIVPSFP 703 (728)
T ss_pred HHHHhcCCCcceEEEEeeecCCCCcEEEEEEEEEecCCCCC-----CCHHHHHHHHHHHHHhhcCCccCCCEEEEcCCCC
Confidence 9995 7899999999999998766 8899999987 4322 333444 445677788899999999999999
Q ss_pred CCCCCcchhHHHHHHHhhcc
Q 008636 533 KTATGKVQKYVLGDIANSMS 552 (558)
Q Consensus 533 ~t~~GK~~r~~l~~~~~~~~ 552 (558)
+|++||++|+.|++++.+..
T Consensus 704 ~T~sGKi~Rr~Lr~~~~~~~ 723 (728)
T PLN03052 704 RTASNKVMRRVLRQQLAQEL 723 (728)
T ss_pred CCCchHHHHHHHHHHHHhhh
Confidence 99999999999999987654
No 59
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=2e-65 Score=535.09 Aligned_cols=499 Identities=26% Similarity=0.357 Sum_probs=421.4
Q ss_pred ChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEec
Q 008636 15 TPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTI 94 (558)
Q Consensus 15 tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 94 (558)
++.++|+..++++|+++|+.+.++++||+||.+++.++|++|.+.|+++|++|+++++|++++++++|||+++|++++|+
T Consensus 1 ~~~~~~~~~~~~~p~~~a~~~~~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l 80 (515)
T TIGR03098 1 LLHHLLEDAAARLPDATALVHHDRTLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTAMFGAALAGGVFVPI 80 (515)
T ss_pred CHHHHHHHHHHHCCCCeEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCEEEEeC
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhHHHhhc
Q 008636 95 NTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLA 174 (558)
Q Consensus 95 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (558)
++..+.+++..+++.++++++|++.+....+........ ....++.+.+....... ......|+++..
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~ 148 (515)
T TIGR03098 81 NPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPGCH---DLRTLILVGEPAHASEG---------GGESPSWPKLLA 148 (515)
T ss_pred CCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhhhhccc---ccceEEEecCcccccCC---------ccccccHHHhhc
Confidence 999999999999999999999998876655544433221 23344444432211100 111234444443
Q ss_pred CCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhhhHHHHHHHh
Q 008636 175 KGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVV 254 (558)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~ 254 (558)
..... ...+...+++++++|||||||.||+|.+||+++..........+.+..+|++++..|++|..++..++.++..
T Consensus 149 ~~~~~--~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~ 226 (515)
T TIGR03098 149 LGDAD--PPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYLENRPDDRLLAVLPLSFDYGFNQLTTAFYV 226 (515)
T ss_pred ccccc--ccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHhCCCcccEEEEECchhhHhHHHHHHHHHHc
Confidence 32211 1123456789999999999999999999999998877777677778899999999999999999888999999
Q ss_pred cceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc-cccCCCCceEEEEecCCCChhhhHHhhh-c-CCeeeec
Q 008636 255 GATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP-EAKQLDRPVRILTAGSPPPAPVLLRTES-L-GFIVSHG 331 (558)
Q Consensus 255 g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~-~~~~~~~l~~v~~~g~~l~~~~~~~~~~-~-~~~v~~~ 331 (558)
|+++++.+.++++.+++.++++++|++.++|+++..|.+.. ....++++|.++++|+++++.+.+.+++ + +..+++.
T Consensus 227 G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~ 306 (515)
T TIGR03098 227 GATVVLHDYLLPRDVLKALEKHGITGLAAVPPLWAQLAQLDWPESAAPSLRYLTNSGGAMPRATLSRLRSFLPNARLFLM 306 (515)
T ss_pred CCEEEEcCCCCHHHHHHHHHHcCCceEecChHHHHHHHhcccCCCCccceEEEEecCCcCCHHHHHHHHHHCCCCeEeee
Confidence 99999998889999999999999999999999999998764 2246678999999999999999999985 4 7889999
Q ss_pred ccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecccccccccCCc
Q 008636 332 YGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDP 411 (558)
Q Consensus 332 YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~ 411 (558)
||+||++....... ........++|.+.+++ .++|+|+ ++..++.+ +.|||+++|+.++.|||+++
T Consensus 307 YG~tE~~~~~~~~~----------~~~~~~~~~vG~~~~~~-~~~i~~~-~~~~~~~~--~~Gel~v~g~~~~~gy~~~~ 372 (515)
T TIGR03098 307 YGLTEAFRSTYLPP----------EEVDRRPDSIGKAIPNA-EVLVLRE-DGSECAPG--EEGELVHRGALVAMGYWNDP 372 (515)
T ss_pred eccccccceEeccc----------ccccCCCCCcceecCCC-EEEEECC-CCCCCCCC--CceEEEEcCchhhccccCCc
Confidence 99999876443221 11123456899999998 9999996 67888776 78999999999999999998
Q ss_pred hhhccccc------------CCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeC
Q 008636 412 EATSKCMK------------DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479 (558)
Q Consensus 412 ~~~~~~~~------------~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~ 479 (558)
+.+...|. ++||+|||+|+++++|.+++.||.+|+|+.+|.+|+|.+||+++.++|.|.+++|++.++
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~ 452 (515)
T TIGR03098 373 EKTAERFRPLPPRPGELHLPELAVWSGDTVRRDEEGFLYFVGRRDEMIKTSGYRVSPTEVEEVAYATGLVAEAVAFGVPD 452 (515)
T ss_pred hhhhhhhhccCCccccccccccceeccceEEEcCCceEEEEeccccceecCCEEeCHHHHHHHHhcCCCeeEEEEEeccC
Confidence 87765542 348999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHH
Q 008636 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGD 546 (558)
Q Consensus 480 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~ 546 (558)
+..|+.++++++...+.. .+.+++.++++++++++++|..++++++||+|.+||++|++|++
T Consensus 453 ~~~g~~~~~~~~~~~~~~-----~~~~~l~~~l~~~l~~~~~p~~i~~v~~iP~t~~GK~~r~~L~~ 514 (515)
T TIGR03098 453 PTLGQAIVLVVTPPGGEE-----LDRAALLAECRARLPNYMVPALIHVRQALPRNANGKIDRKALAA 514 (515)
T ss_pred cccCceEEEEEEeCCCCC-----CCHHHHHHHHHhhCccccCCCEEEEeccCCCCCCCCCcHHHhcc
Confidence 988999999888655443 67889999999999999999999999999999999999999974
No 60
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.2e-65 Score=536.87 Aligned_cols=514 Identities=29% Similarity=0.419 Sum_probs=421.7
Q ss_pred CCCCCChhhHHHHHhhcCCCCceEEE--CCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhc
Q 008636 10 NSCPLTPLGFIERAATACDDCPSIIY--NDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMS 87 (558)
Q Consensus 10 ~~~~~tl~~~l~~~a~~~p~~~a~~~--~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~ 87 (558)
+-...++.++|.+.++++|+++|+++ .++.+||+||.+++.++|.+|.+.|+++|++|+++++|++++++++|||+++
T Consensus 14 ~~~~~~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~~a~~~~ 93 (558)
T PRK12583 14 PLLTQTIGDAFDATVARFPDREALVVRHQALRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAEWLLTQFATARI 93 (558)
T ss_pred CcccCcHHHHHHHHHHHCCCCeEEEecCCCcEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHhh
Confidence 34556899999999999999999988 4578999999999999999999999999999999999999999999999999
Q ss_pred CcEEEeccccCChHHHHHHHhhcCccEEEEeCcCh-----HHHHHHhhcCCCC----------CCCCcEEEEcCCccccC
Q 008636 88 GAIFNTINTRLDARTISIILKHSESKLVFVDHLSS-----SLLLEVVSLFPPH----------SKTPKLVLITDDKEISS 152 (558)
Q Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~ 152 (558)
|++++++++..+.+++..+++.++++++|+++... ..+.+........ .....++.......
T Consensus 94 G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 170 (558)
T PRK12583 94 GAILVNINPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLPELRGVVSLAPAPP--- 170 (558)
T ss_pred CCEEEecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCCcceEEEEecCCCC---
Confidence 99999999999999999999999999999976432 2222222211000 00111111111100
Q ss_pred CCCCCCCCCCCCchhhHHHhhcCCCCC-----CCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhccccccc
Q 008636 153 SSSPPPRIPPADFVDTYENMLAKGDPQ-----FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVV 227 (558)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~ 227 (558)
.....|.+....+... ........++++++++|||||||.||+|.++|+++..........+++
T Consensus 171 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~~~ 239 (558)
T PRK12583 171 -----------PGFLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESLGL 239 (558)
T ss_pred -----------ccccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHhCC
Confidence 0112333333222111 111123457899999999999999999999999998877777777788
Q ss_pred CCCCEEEEecCchhhhhh-hHHHHHHHhcceEEEec-CCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc--cccCCCCc
Q 008636 228 PKQSVLLWTLPMFHNNGW-SFTWGAAVVGATNVCLR-KFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRP 303 (558)
Q Consensus 228 ~~~~~~~~~~p~~~~~g~-~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~--~~~~~~~l 303 (558)
..+|+++...|++|..|+ ..++.++..|+++++.. .+++..+++.++++++|++.++|+++..++... ....++++
T Consensus 240 ~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~l 319 (558)
T PRK12583 240 TEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQRGNFDLSSL 319 (558)
T ss_pred CCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHccccccCCCchhh
Confidence 899999999999999887 45677788888887654 578999999999999999999999998888765 23356799
Q ss_pred eEEEEecCCCChhhhHHhh-hcC-CeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCC
Q 008636 304 VRILTAGSPPPAPVLLRTE-SLG-FIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPE 381 (558)
Q Consensus 304 ~~v~~~g~~l~~~~~~~~~-~~~-~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~ 381 (558)
|.+++||+++++.+.+.+. .++ ..+++.||+||+++++..+..... ......++|.|.+++ .++|+|++
T Consensus 320 r~i~~~G~~~~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~--------~~~~~~~vG~p~~~~-~~~i~d~~ 390 (558)
T PRK12583 320 RTGIMAGAPCPIEVMRRVMDEMHMAEVQIAYGMTETSPVSLQTTAADD--------LERRVETVGRTQPHL-EVKVVDPD 390 (558)
T ss_pred eEEEecCCCCCHHHHHHHHHHcCCcceeccccccccccceeccCcccc--------cccccCCCCccCCCC-eEEEECCC
Confidence 9999999999999999987 454 579999999999987766532211 112346789999998 99999985
Q ss_pred CCcccCCCCCeeeEEEEecccccccccCCchhhcccc-cCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHH
Q 008636 382 TGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM-KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIE 460 (558)
Q Consensus 382 ~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE 460 (558)
+.+++.+ +.|||+++|+.++.||++++..+...| .++||+|||+|+++++|.+++.||++|+|+.+|.+|+|.+||
T Consensus 391 -~~~~~~g--~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~dg~l~i~GR~~~~i~~~G~~v~~~~IE 467 (558)
T PRK12583 391 -GATVPRG--EIGELCTRGYSVMKGYWNNPEATAESIDEDGWMHTGDLATMDEQGYVRIVGRSKDMIIRGGENIYPREIE 467 (558)
T ss_pred -CCCCCCC--CeeEEEEEeCccchhhcCChHHHHhhcCCCCCeeccceEEECCCccEEEEecccceeEECCEEeCHHHHH
Confidence 7888887 789999999999999999999887777 789999999999999999999999999999999999999999
Q ss_pred HHHhcCCCcceeEEEeeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcch
Q 008636 461 SVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540 (558)
Q Consensus 461 ~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~ 540 (558)
+.|.++++|.+++|++.+++..++.++++++..++.. ...++++++++++|+++++|..+++++++|+|++||++
T Consensus 468 ~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~-----~~~~~i~~~~~~~L~~~~~P~~i~~v~~lP~t~sGK~~ 542 (558)
T PRK12583 468 EFLFTHPAVADVQVFGVPDEKYGEEIVAWVRLHPGHA-----ASEEELREFCKARIAHFKVPRYFRFVDEFPMTVTGKVQ 542 (558)
T ss_pred HHHHhCCCeeEEEEEeeecCCCCcEEEEEEEECCCCC-----CCHHHHHHHHHhhcccCcCCcEEEEeccCCCCCCCCcc
Confidence 9999999999999999999888889999999876543 56789999999999999999999999999999999999
Q ss_pred hHHHHHHHhhcccc
Q 008636 541 KYVLGDIANSMSMS 554 (558)
Q Consensus 541 r~~l~~~~~~~~~~ 554 (558)
|+.|++++.+...+
T Consensus 543 r~~L~~~~~~~~~~ 556 (558)
T PRK12583 543 KFRMREISIEELAL 556 (558)
T ss_pred HHHHHHHHHhhcCC
Confidence 99999998765443
No 61
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.2e-65 Score=544.03 Aligned_cols=520 Identities=18% Similarity=0.192 Sum_probs=398.8
Q ss_pred CCCChhhHHHHHhhcCCCCceEEEC--C---ccccHHHHHHHHHHHHHHHHh---CCCCCC-----------CEEEEEcC
Q 008636 12 CPLTPLGFIERAATACDDCPSIIYN--D---TTYTWSQTYRRCLQLASSLSS---FGINPG-----------HVVSVIAP 72 (558)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~--~---~~~Ty~~l~~~v~~la~~L~~---~Gv~~g-----------d~V~i~~~ 72 (558)
.-.|+.++|.++++++|+++|+.+. + +.+||+|+.+++.++|++|.+ +|+++| |+|+|+++
T Consensus 59 ~~~~l~~~l~~~~~~~p~~~Al~~~~~g~~~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~ 138 (746)
T PTZ00342 59 VYKHIMKLLLEKYKLNNNKIAIVEHSCGEPQNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGS 138 (746)
T ss_pred ccchHHHHHHHHHhhcCCceeEeccCCCCCceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcC
Confidence 3569999999999999999999873 2 689999999999999999997 499998 99999999
Q ss_pred CchhHHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCcccc-
Q 008636 73 NIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEIS- 151 (558)
Q Consensus 73 ~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 151 (558)
|+++|++++|||+++|++++|+++.++.+++.+++++++++++|++.+..+.+.+.....+ ..+.++.++......
T Consensus 139 N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~~~~---~l~~ii~~~~~~~~~~ 215 (746)
T PTZ00342 139 NSINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERKNELP---HLKKLIILDTLIKSKE 215 (746)
T ss_pred CCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhccCC---CceEEEEECCCCcccc
Confidence 9999999999999999999999999999999999999999999998777766666544332 345666664321100
Q ss_pred -CC-------------CCCCCC----------------------C----------------CCCCchhhHHHhhcCCCCC
Q 008636 152 -SS-------------SSPPPR----------------------I----------------PPADFVDTYENMLAKGDPQ 179 (558)
Q Consensus 152 -~~-------------~~~~~~----------------------~----------------~~~~~~~~~~~~~~~~~~~ 179 (558)
.. ...... . ........|.++.......
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 295 (746)
T PTZ00342 216 ININKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISIILFDDMTKNKTTN 295 (746)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCCCEEEEHHHHHhhcccC
Confidence 00 000000 0 0000011122222211111
Q ss_pred CCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhccccc--ccCCCCEEEEecCchhhhhhhHHHHHHHhcce
Q 008636 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDW--VVPKQSVLLWTLPMFHNNGWSFTWGAAVVGAT 257 (558)
Q Consensus 180 ~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~ 257 (558)
....+..++|+++|+|||||||.||||++||+++........... .....+++++.+|++|.+++...+.+++.|++
T Consensus 296 -~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~~~~~~d~~ls~LPL~Hi~~~~~~~~~l~~G~~ 374 (746)
T PTZ00342 296 -YKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIFKKYNPKTHLSYLPISHIYERVIAYLSFMLGGT 374 (746)
T ss_pred -CCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccccCCCCCeEEEeCcHHHHHHHHHHHHHHHcCCE
Confidence 112235678999999999999999999999999987765433221 22356899999999999999778888999999
Q ss_pred EEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcC--------c--cc------------------------------
Q 008636 258 NVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSS--------P--EA------------------------------ 297 (558)
Q Consensus 258 ~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~--------~--~~------------------------------ 297 (558)
+++.+. ++..+++.|++++||+++++|.+|+.+.+. + ..
T Consensus 375 i~~~~~-~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~v~~ 453 (746)
T PTZ00342 375 INIWSK-DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRKSNNNGGFSKFLEGITHISS 453 (746)
T ss_pred EEEeCC-CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhhcCCcchHHHHHHHHHH
Confidence 998765 899999999999999999999999988652 1 00
Q ss_pred ----cCCCCceEEEEecCCCChhhhHHhh-hcCCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCcee-cc
Q 008636 298 ----KQLDRPVRILTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRT-IG 371 (558)
Q Consensus 298 ----~~~~~l~~v~~~g~~l~~~~~~~~~-~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~ 371 (558)
...+++|.+++||+++++++.+.++ .+|++++++||+||+++.++..... ....+++|.|. ++
T Consensus 454 kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~g~~i~~gYGlTEt~~~~~~~~~~-----------~~~~gsvG~p~~pg 522 (746)
T PTZ00342 454 KIKDKVNPNLEVILNGGGKLSPKIAEELSVLLNVNYYQGYGLTETTGPIFVQHAD-----------DNNTESIGGPISPN 522 (746)
T ss_pred HHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhcCCCEEEeeccCcccceeeeccCC-----------CCCcccccCcCCCc
Confidence 0125899999999999999999998 5799999999999998765543210 12346899998 88
Q ss_pred cceeeEeCCCCCcccCCCCCeeeEEEEecccccccccCCchhhccccc-CCceeeCceeEEccCCcEEEecccCCeee-e
Q 008636 372 LTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK-DGRYYTGDVGMMHPDGYLEIKDRSKDVII-S 449 (558)
Q Consensus 372 ~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~l~~~GR~~d~i~-~ 449 (558)
+ +++|+|.+++...... ..|||+++||+++.|||++|+.+.+.|. +|||+|||+|++|+||+|++.||++|+|| .
T Consensus 523 ~-e~ki~d~~~~~~~~~~--~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~~TGDig~~d~dG~l~i~gR~kdlIkls 599 (746)
T PTZ00342 523 T-KYKVRTWETYKATDTL--PKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYFKTGDIVQINKNGSLTFLDRSKGLVKLS 599 (746)
T ss_pred E-EEEEecccccccCCCC--CceEEEEecCcccccccCChhhhhhhcCcCCcccCCcEEEECCCCeEEEEccCCCeEEeC
Confidence 7 9999985444433333 4599999999999999999999999994 99999999999999999999999999999 6
Q ss_pred CceeechHHHHHHHhcCCCcceeEEEeeeCCCCCceeEEEEEecCCCC---------------C-CC--C-----CCC--
Q 008636 450 GGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTD---------------S-GG--M-----MTT-- 504 (558)
Q Consensus 450 ~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~---------------~-~~--~-----~~~-- 504 (558)
+|++|+|.+||++|.++|.|.+|+|++.+. ...++|+|++..... . .+ + ...
T Consensus 600 ~Ge~I~p~eIE~~l~~~p~V~~~~VvG~~~---~~~~~Alvv~d~~~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 676 (746)
T PTZ00342 600 QGEYIETDMLNNLYSQISFINFCVVYGDDS---MDGPLAIISVDKYLLFKCLKDDNMLESTGINEKNYLEKLTDETINNN 676 (746)
T ss_pred CCEEEchHHHHHHHhcCCCccEEEEEccCC---ccccEEEEECCHHHHHHHHHhcCCccccccCcccHHHHhhhhhhccH
Confidence 899999999999999999999999999642 235888888764210 0 00 0 001
Q ss_pred --HHHHHHHH-----HhcCCCccccCeEEEec-ccC----CCCCCcchhHHHHHHHhhccc
Q 008636 505 --EKDIIQYC-----RARIPRYMVPKTVVFID-ELP----KTATGKVQKYVLGDIANSMSM 553 (558)
Q Consensus 505 --~~~l~~~~-----~~~l~~~~~p~~i~~v~-~~P----~t~~GK~~r~~l~~~~~~~~~ 553 (558)
.+.+.+.+ +..|+.+.+++.|.++. +|. +||+.|+.|..+.+.|+.++.
T Consensus 677 ~~~~~v~~~~~~~~~~~~l~~~e~i~~~~l~~~~~t~~~~lTpt~KlkR~~v~~~y~~~i~ 737 (746)
T PTZ00342 677 IYVDYVKGKMLEVYKKTNLNRYNIINDIYLTSKVWDTNNYLTPTFKVKRFYVFKDYAFFID 737 (746)
T ss_pred HHHHHHHHHHHHHHHHhCCccceeeeeEEEecCCCCCCCccChhhhhhHHHHHHHHHHHHH
Confidence 11112222 23599999999888874 332 799999999999999996554
No 62
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.2e-65 Score=530.42 Aligned_cols=478 Identities=27% Similarity=0.369 Sum_probs=400.0
Q ss_pred HHHhhcCCCCceEEE--CCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccccC
Q 008636 21 ERAATACDDCPSIIY--NDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRL 98 (558)
Q Consensus 21 ~~~a~~~p~~~a~~~--~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~ 98 (558)
+.++..+|+++|+.+ .++.+||+|+.+.+.++|.+|.+.|+++||+|+++++|++++++++|||+++|++++|+++..
T Consensus 2 ~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~~~~~~ 81 (488)
T PRK09088 2 AFHARLQPQRLAAVDLALGRRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLVALHFACARVGAIYVPLNWRL 81 (488)
T ss_pred chhhhhCCCceEEEecCCCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEeeCccC
Confidence 456778999999987 678999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhHHHhhcCCCC
Q 008636 99 DARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDP 178 (558)
Q Consensus 99 ~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (558)
+.+.+..+++.++++++|++++.... ...... ...+.+.......
T Consensus 82 ~~~~~~~~~~~~~~~~ii~~~~~~~~-------------~~~~~~----------------------~~~~~~~~~~~~~ 126 (488)
T PRK09088 82 SASELDALLQDAEPRLLLGDDAVAAG-------------RTDVED----------------------LAAFIASADALEP 126 (488)
T ss_pred CHHHHHHHHHhCCCCEEEEcchhhcc-------------cccccc----------------------hhhhhhhcccccc
Confidence 99999999999999999997643210 000000 0001000000000
Q ss_pred CCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhhh-HHHHHHHhcce
Q 008636 179 QFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWS-FTWGAAVVGAT 257 (558)
Q Consensus 179 ~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~-~~~~~l~~g~~ 257 (558)
........+++++++|||||||.||+|.++|+++................+++++.+|++|..++. .+..++..|++
T Consensus 127 --~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~~ 204 (488)
T PRK09088 127 --ADTPSIPPERVSLILFTSGTSGQPKGVMLSERNLQQTAHNFGVLGRVDAHSSFLCDAPMFHIIGLITSVRPVLAVGGS 204 (488)
T ss_pred --ccCCCCCCCCceEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhhCCCCCcEEEEecchHHHHHHHHHHHHHHhcCCE
Confidence 001123467899999999999999999999999977666655556678899999999999999985 46667788999
Q ss_pred EEEecCCCHHHHHHHHH--HhCCcEEEehHHHHHHHhcCc--cccCCCCceEEEEecCCCChhhhHHhhhcCCeeeeccc
Q 008636 258 NVCLRKFDAPTVFALIR--KHGVTHMCGAPIVLNLLSSSP--EAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYG 333 (558)
Q Consensus 258 ~~~~~~~~~~~~~~~i~--~~~~t~l~~~p~~l~~l~~~~--~~~~~~~l~~v~~~g~~l~~~~~~~~~~~~~~v~~~YG 333 (558)
+++.+.+++..++..+. ++++|+++++|.+++.+.+.. ....+++++.+++||++++......+.+.++++++.||
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~g~~v~~~YG 284 (488)
T PRK09088 205 ILVSNGFEPKRTLGRLGDPALGITHYFCVPQMAQAFRAQPGFDAAALRHLTALFTGGAPHAAEDILGWLDDGIPMVDGFG 284 (488)
T ss_pred EEEcCCCCHHHHHHHHHhhccCCcEEeeHHHHHHHHHhCcCcCccccccceEEEecCCCCCHHHHHHHHHhCCceeeeec
Confidence 88888888999998886 489999999999999998764 33456799999999999999888887766899999999
Q ss_pred CCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecccccccccCCchh
Q 008636 334 KTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEA 413 (558)
Q Consensus 334 ~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~ 413 (558)
+||++++....... .......+++|.+.+++ +++|+|+ ++..++.+ +.|||+++|++++.||+++++.
T Consensus 285 ~TE~~~~~~~~~~~--------~~~~~~~~~vG~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~gY~~~~~~ 352 (488)
T PRK09088 285 MSEAGTVFGMSVDC--------DVIRAKAGAAGIPTPTV-QTRVVDD-QGNDCPAG--VPGELLLRGPNLSPGYWRRPQA 352 (488)
T ss_pred ccccccccccCCCc--------ccccccCCccccCCCCc-EEEEECC-CCCCCcCC--CceEEEEECCccchhhcCChhh
Confidence 99998754322100 00112335789999998 9999996 67778777 7899999999999999999988
Q ss_pred hcccc-cCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCCCCCceeEEEEEe
Q 008636 414 TSKCM-KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSL 492 (558)
Q Consensus 414 ~~~~~-~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~ 492 (558)
+...+ .+|||+|||+|+++++|.+++.||.+|+|+.+|.+|+|.+||+.|.++|.|.+++|++.+++..|+..++++++
T Consensus 353 ~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~ 432 (488)
T PRK09088 353 TARAFTGDGWFRTGDIARRDADGFFWVVDRKKDMFISGGENVYPAEIEAVLADHPGIRECAVVGMADAQWGEVGYLAIVP 432 (488)
T ss_pred hhhhhcCCCCeeecceEEEcCCCcEEEeccccceEEeCCEEECHHHHHHHHHhCCCcceEEEEeCCCccCCceeEEEEEE
Confidence 87776 48999999999999999999999999999999999999999999999999999999999988778888898888
Q ss_pred cCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHhhcc
Q 008636 493 KTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSMS 552 (558)
Q Consensus 493 ~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~~~ 552 (558)
.++.. .+.+++.++++++++++++|..++++++||+|++||++|++|++++.+..
T Consensus 433 ~~~~~-----~~~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~gKi~r~~l~~~~~~~~ 487 (488)
T PRK09088 433 ADGAP-----LDLERIRSHLSTRLAKYKVPKHLRLVDALPRTASGKLQKARLRDALAAGR 487 (488)
T ss_pred CCCCC-----CCHHHHHHHHHhhCcCCCCCCEEEEcccCCCCCCCceeHHHHHHHHHhcC
Confidence 76543 57789999999999999999999999999999999999999999988753
No 63
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=5.9e-65 Score=531.13 Aligned_cols=499 Identities=24% Similarity=0.323 Sum_probs=413.4
Q ss_pred CCChhhHHHHHhhcCCCCceEEECC-----ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhc
Q 008636 13 PLTPLGFIERAATACDDCPSIIYND-----TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMS 87 (558)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~~-----~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~ 87 (558)
..++.++|+++++++|+++|+++.+ +.+||+||.+++.++|.+|.++|+++||+|+++++|++++++++|||+++
T Consensus 6 ~~~l~~~~~~~a~~~p~~~a~~~~~~~~~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~~~la~~~~ 85 (517)
T PRK08008 6 GQHLRQMWDDLADVYGHKTALIFESSGGVVRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIFCWFGLAKI 85 (517)
T ss_pred cccHHHHHHHHHHHCCCceEEEcccCCCccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHc
Confidence 3589999999999999999999854 68999999999999999999999999999999999999999999999999
Q ss_pred CcEEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchh
Q 008636 88 GAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVD 167 (558)
Q Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (558)
|++++++++..+.+++..+++.++++++|++.+....+.+....... ....+......... .....
T Consensus 86 G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~------------~~~~~ 151 (517)
T PRK08008 86 GAIMVPINARLLREESAWILQNSQASLLVTSAQFYPMYRQIQQEDAT--PLRHICLTRVALPA------------DDGVS 151 (517)
T ss_pred CeEEEEcCcccCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhccc--cCcEEEEecCCCcc------------ccccc
Confidence 99999999999999999999999999999998877776665543221 12334443322100 00123
Q ss_pred hHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhh-h
Q 008636 168 TYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGW-S 246 (558)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~-~ 246 (558)
.+.++............+..++++++++|||||||.||+|.++|.++............+..++++++..|++|..+. .
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 231 (517)
T PRK08008 152 SFTQLKAQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCT 231 (517)
T ss_pred CHHHHhccCCccccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhcCCCCCCeEEEecCcHHHHHHHH
Confidence 344433332222222223456899999999999999999999999997554333333456788999999999998665 5
Q ss_pred HHHHHHHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCcc--ccCCCCceEEEEecCCCChhhhHHhh-h
Q 008636 247 FTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE--AKQLDRPVRILTAGSPPPAPVLLRTE-S 323 (558)
Q Consensus 247 ~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~--~~~~~~l~~v~~~g~~l~~~~~~~~~-~ 323 (558)
.++.++..|+++++.+.+++..+++.++++++|++.++|.+++.+..... .....+++.+.++ +.++......+. .
T Consensus 232 ~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~ 310 (517)
T PRK08008 232 AAMAAFSAGATFVLLEKYSARAFWGQVCKYRATITECIPMMIRTLMVQPPSANDRQHCLREVMFY-LNLSDQEKDAFEER 310 (517)
T ss_pred HHHHHHhcCcEEEEccccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCccccccccceeeEEe-cCCCHHHHHHHHHH
Confidence 57788889999999988999999999999999999999999999876552 2234567777765 478888888777 4
Q ss_pred cCCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEec---
Q 008636 324 LGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRG--- 400 (558)
Q Consensus 324 ~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~--- 400 (558)
+++++++.||+||+++.+....... .....++|.+.+++ +++|+|+ ++.+++.+ +.|||+++|
T Consensus 311 ~~~~~~~~YG~tE~~~~~~~~~~~~----------~~~~~~~G~~~~g~-~~~i~d~-~~~~~~~g--~~Gel~v~g~~~ 376 (517)
T PRK08008 311 FGVRLLTSYGMTETIVGIIGDRPGD----------KRRWPSIGRPGFCY-EAEIRDD-HNRPLPAG--EIGEICIKGVPG 376 (517)
T ss_pred hCCeEEeeccccccccccccCCccc----------cccCCccccCCCCc-EEEEECC-CCCCCCCC--CcceEEEeCCCC
Confidence 6999999999999986555432111 12235789999998 9999997 67888887 789999998
Q ss_pred ccccccccCCchhhcccc-cCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeC
Q 008636 401 GSLMLGYLKDPEATSKCM-KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479 (558)
Q Consensus 401 ~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~ 479 (558)
++++.||+++++.+.+.| .+|||+|||+|+++++|.+++.||++|+|+.+|.+|+|.+||+++.+++.|.+++|++.++
T Consensus 377 ~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~iE~~l~~~~~v~~~~v~g~~~ 456 (517)
T PRK08008 377 KTIFKEYYLDPKATAKVLEADGWLHTGDTGYVDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKD 456 (517)
T ss_pred cchhhhHhCChHHHhhcccCCCCeeccceEEECCCCcEEEeecccceEEeCCEEECHHHHHHHHHhCCceeeEEEEccCC
Confidence 589999999999988887 4899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHH
Q 008636 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLG 545 (558)
Q Consensus 480 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~ 545 (558)
+..++.+.+++++.++.. .+.++++++++++++++++|..++++++||+|++||++|+.|+
T Consensus 457 ~~~~~~~~~~v~~~~~~~-----~~~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~gK~~r~~l~ 517 (517)
T PRK08008 457 SIRDEAIKAFVVLNEGET-----LSEEEFFAFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIKKNLK 517 (517)
T ss_pred CCCCceEEEEEEECCCCC-----CCHHHHHHHHHhhcccccCCcEEEEeccCCCCCccceehhhcC
Confidence 888888999999887654 6778999999999999999999999999999999999999874
No 64
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.1e-65 Score=532.28 Aligned_cols=488 Identities=24% Similarity=0.335 Sum_probs=396.4
Q ss_pred CChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCC-CCCCEEEEEcCCchhHHHHHHHHhhcCcEEE
Q 008636 14 LTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI-NPGHVVSVIAPNIPAMYELHFAVPMSGAIFN 92 (558)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv-~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (558)
.|+.++|..++ .|+++|+++.+..+||+||.+++.++|..|.+.|+ ++||+|+++++|++++++++|||+++|++++
T Consensus 3 ~~~~~~l~~~~--~p~~~Al~~~~~~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~~~lA~~~~Ga~~v 80 (540)
T PRK13388 3 DTIAQLLRDRA--GDDTIAVRYGDRTWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLFWLAAAALGGYVLV 80 (540)
T ss_pred hhHHHHHHhhc--cCCceEEEECCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHHHHHHHHhCCCEEE
Confidence 47888888765 69999999999999999999999999999999999 8999999999999999999999999999999
Q ss_pred eccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhHHHh
Q 008636 93 TINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENM 172 (558)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (558)
|++|.++.+++..+++.++++++|++.+....+.+.. .. ...++.+... .+.++
T Consensus 81 ~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~--~~----~~~~i~~~~~--------------------~~~~~ 134 (540)
T PRK13388 81 GLNTTRRGAALAADIRRADCQLLVTDAEHRPLLDGLD--LP----GVRVLDVDTP--------------------AYAEL 134 (540)
T ss_pred EecccCChHHHHHHHHhcCCCEEEEChhhhHHHHhhc--cc----CceEEEccch--------------------hhhhh
Confidence 9999999999999999999999999877655443321 00 1122222211 11222
Q ss_pred hcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhhhH-HHHH
Q 008636 173 LAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSF-TWGA 251 (558)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~~~ 251 (558)
+..... ........++++++++|||||||.||+|.++|+++..........+++..+|+++..+|++|..++.. ++.+
T Consensus 135 ~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~ 213 (540)
T PRK13388 135 VAAAGA-LTPHREVDAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERFGLTRDDVCYVSMPLFHSNAVMAGWAPA 213 (540)
T ss_pred hccccC-cCCCCCCCCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHhCCCCCCEEEEeeCchhhcchHHHHHHH
Confidence 221111 11112256789999999999999999999999999877776677788999999999999999988854 4457
Q ss_pred HHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCccc--cCCCCceEEEEecCCCChhhhHHhh-hcCCee
Q 008636 252 AVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLDRPVRILTAGSPPPAPVLLRTE-SLGFIV 328 (558)
Q Consensus 252 l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~--~~~~~l~~v~~~g~~l~~~~~~~~~-~~~~~v 328 (558)
+..|+++++.+.+++..+++.++++++|++..+|..+..++..+.. .....++ +++ |+.+++.....+. .+++++
T Consensus 214 l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~~~~~~~~~~l~-~~~-G~~~~~~~~~~~~~~~~~~l 291 (540)
T PRK13388 214 VASGAAVALPAKFSASGFLDDVRRYGATYFNYVGKPLAYILATPERPDDADNPLR-VAF-GNEASPRDIAEFSRRFGCQV 291 (540)
T ss_pred HHcCcEEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCCCCccccccceE-EEE-CCCCCHHHHHHHHHHhCCce
Confidence 8889999888888999999999999999999999999998866522 1122444 333 5666777777776 568999
Q ss_pred eecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceeccccee-----------eEeCCCCCcccCCCCCeeeEEE
Q 008636 329 SHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEV-----------DIVDPETGLSVKRDGQTRGEIV 397 (558)
Q Consensus 329 ~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----------~i~d~~~~~~~~~~~~~~Gel~ 397 (558)
++.||+||++.++..... ....++|.|.+++ ++ .++|+ +|..+..+ +..|||+
T Consensus 292 ~~~YG~tE~~~~~~~~~~-------------~~~~~vG~p~~g~-~i~~~~~~~~~~~~~~d~-~g~~~~~~-~~~GEl~ 355 (540)
T PRK13388 292 EDGYGSSEGAVIVVREPG-------------TPPGSIGRGAPGV-AIYNPETLTECAVARFDA-HGALLNAD-EAIGELV 355 (540)
T ss_pred ecccccccccceeecCCC-------------CCCCCCCCCCCCc-EEEcCCCCccccceeccC-ccccccCC-CcceEEE
Confidence 999999999876653210 1234788888765 33 13332 34333222 2679999
Q ss_pred Ee-cccccccccCCchhhcccccCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEe
Q 008636 398 MR-GGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476 (558)
Q Consensus 398 v~-~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~ 476 (558)
++ |++++.||+++++.+...|.+|||+|||+|+++++|.+++.||++|+|+.+|++|+|.+||++|.++|+|.+|+|++
T Consensus 356 v~~g~~~~~gY~~~~~~t~~~~~~g~~~TGD~~~~~~dg~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~g 435 (540)
T PRK13388 356 NTAGAGFFEGYYNNPEATAERMRHGMYWSGDLAYRDADGWIYFAGRTADWMRVDGENLSAAPIERILLRHPAINRVAVYA 435 (540)
T ss_pred EecCCcccccccCChHHHHHHhhcCceeccceEEEcCCCcEEEeccCCceEEECCEEeCHHHHHHHHHhCCCceEEEEEE
Confidence 98 99999999999999988888999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHh--cCCCccccCeEEEecccCCCCCCcchhHHHHHHHhhccc
Q 008636 477 RPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRA--RIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSMSM 553 (558)
Q Consensus 477 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~--~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~~~~ 553 (558)
.+++..|+.+++++++.++.. .+.++++++++. .|+++++|..++++++||+|++||++|++|+++..+...
T Consensus 436 ~~~~~~g~~~~~~v~~~~~~~-----~~~~~l~~~l~~~~~l~~~~~P~~~~~v~~iP~t~~GKv~R~~L~~~~~~~~~ 509 (540)
T PRK13388 436 VPDERVGDQVMAALVLRDGAT-----FDPDAFAAFLAAQPDLGTKAWPRYVRIAADLPSTATNKVLKRELIAQGWATGD 509 (540)
T ss_pred ccCCCCCceeEEEEEECCCCc-----CCHHHHHHHHHhhccCCcccCCcEEEEeccCCCCCcceeeHHhHHHhccCCCC
Confidence 999888888888888876654 677889999975 499999999999999999999999999999998766543
No 65
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.4e-65 Score=546.69 Aligned_cols=504 Identities=19% Similarity=0.225 Sum_probs=401.1
Q ss_pred CCCChhhHHHHHhhcCCCCceEEECC---------ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHH
Q 008636 12 CPLTPLGFIERAATACDDCPSIIYND---------TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHF 82 (558)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~~---------~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~l 82 (558)
...|+.++|+++++.+|+++|+++.+ +.+||+||.+++.++|++|.+. +++||+|+++++|++++++++|
T Consensus 19 ~~~~l~~~l~~~a~~~~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-~~~gd~V~i~~~n~~e~~~~~l 97 (631)
T PRK07769 19 PNTNLVRHVERWAKVRGDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQV-TKPGDRVAILAPQNLDYLIAFF 97 (631)
T ss_pred ccCCHHHHHHHHHHhCCCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHHh-cCCCCEEEEEcCCChHHHHHHH
Confidence 34689999999999999999998732 5799999999999999999987 8999999999999999999999
Q ss_pred HHhhcCcEEEec-cccCC--hHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCC
Q 008636 83 AVPMSGAIFNTI-NTRLD--ARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPR 159 (558)
Q Consensus 83 A~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (558)
||+++|++++|+ ++..+ .+++.++++.++++++|++.+....+.+........ ....++.++.....
T Consensus 98 A~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--------- 167 (631)
T PRK07769 98 GALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPAK-ERPRVIAVDAVPDE--------- 167 (631)
T ss_pred HHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhcccc-ccceEEEccccccc---------
Confidence 999999999999 55554 578999999999999999887655554443222110 01222222110000
Q ss_pred CCCCCchhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCc
Q 008636 160 IPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239 (558)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 239 (558)
... .. ......++++++|+|||||||.||+|.++|+++..........+++..+++++..+|+
T Consensus 168 -------------~~~---~~-~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl 230 (631)
T PRK07769 168 -------------VGA---TW-VPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDALEGQEGDRGVSWLPF 230 (631)
T ss_pred -------------ccc---cc-CCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHcCCCCcceEEEeCCC
Confidence 000 00 0012456899999999999999999999999998777766667788899999999999
Q ss_pred hhhhhhhHHHHHHHhcceEEEecC--C--CHHHHHHHHHHhCC---cEEEehHHHHHHHhcC---cc----ccCCCCceE
Q 008636 240 FHNNGWSFTWGAAVVGATNVCLRK--F--DAPTVFALIRKHGV---THMCGAPIVLNLLSSS---PE----AKQLDRPVR 305 (558)
Q Consensus 240 ~~~~g~~~~~~~l~~g~~~~~~~~--~--~~~~~~~~i~~~~~---t~l~~~p~~l~~l~~~---~~----~~~~~~l~~ 305 (558)
+|..|+...+.+++.|++++++++ + ++..+++.++++++ +.+.++|.++..+... .. ...++++|.
T Consensus 231 ~h~~gl~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~lr~ 310 (631)
T PRK07769 231 FHDMGLITVLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGLPKDGEPPLDLSNVKG 310 (631)
T ss_pred cCchhhHHHHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhccchhcccCcchhheee
Confidence 999999877788888999988853 3 88999999999886 7899999887766542 11 335789999
Q ss_pred EEEecCCCChhhhHHhhh-c---CC---eeeecccCCCCCCcccccCCCCCCCC--CCh--------------hhhhhhc
Q 008636 306 ILTAGSPPPAPVLLRTES-L---GF---IVSHGYGKTEIAGVNVSCAWKPKWNK--LPA--------------RERASLK 362 (558)
Q Consensus 306 v~~~g~~l~~~~~~~~~~-~---~~---~v~~~YG~tE~g~~~~~~~~~~~~~~--~~~--------------~~~~~~~ 362 (558)
+++||+++++++.+.+.+ + |+ .+++.||+||++.++........... ... .......
T Consensus 311 ~~~gg~~l~~~~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 390 (631)
T PRK07769 311 LLNGSEPVSPASMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPNAVAQ 390 (631)
T ss_pred EEeccCCCCHHHHHHHHHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCCceeE
Confidence 999999999999998874 3 33 58999999998765554321110000 000 0000122
Q ss_pred ccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecccccccccCCchhhccccc------------------CCcee
Q 008636 363 ARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK------------------DGRYY 424 (558)
Q Consensus 363 ~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~------------------~g~~~ 424 (558)
.++|.+.++. .++|+|++++.+++.| +.|||+++|++++.|||++++.+.+.|. +|||+
T Consensus 391 ~s~G~~~~~~-~~~ivd~~~g~~~~~g--e~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~ 467 (631)
T PRK07769 391 VSAGKVGVSE-WAVIVDPETASELPDG--QIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDALWVR 467 (631)
T ss_pred EeCCCcCCCc-EEEEEcCCCCcCCCCC--CEEEEEecCCCccccccCChhHHHHHHhhhcccccccccccCcccCCCeee
Confidence 4789998888 9999998788888887 8899999999999999999998887773 38999
Q ss_pred eCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhc-CCCcce--eEEEeeeC-------------------CCC
Q 008636 425 TGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYS-HPMVNE--AAVVGRPD-------------------PFW 482 (558)
Q Consensus 425 TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~-~~~v~~--~~v~~~~~-------------------~~~ 482 (558)
|||+|+++ ||+|++.||+||+||++|++|+|.+||+.|.+ +|.|.+ ++|+++++ +..
T Consensus 468 TGDlg~~~-dG~l~i~GR~~d~Ik~~G~~V~p~eIE~~l~~~~p~v~~~~~av~~v~d~~~~~~~~~~~~~~~~~~~~~~ 546 (631)
T PRK07769 468 TGDYGVYF-DGELYITGRVKDLVIIDGRNHYPQDLEYTAQEATKALRTGYVAAFSVPANQLPQVVFDDSHAGLKFDPEDT 546 (631)
T ss_pred ccccccEE-CCEEEEEcccccEEEECCeeeCHHHHHHHHHhccccccCCcEEEEEecccccccccccccccccccccCCC
Confidence 99999996 99999999999999999999999999999996 899998 89999888 557
Q ss_pred CceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCC-cc-ccCeEEEec--ccCCCCCCcchhHHHHHHHhhc
Q 008636 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPR-YM-VPKTVVFID--ELPKTATGKVQKYVLGDIANSM 551 (558)
Q Consensus 483 ~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~-~~-~p~~i~~v~--~~P~t~~GK~~r~~l~~~~~~~ 551 (558)
|+.+++++++.++... .+.++|.+++++++.. ++ .|+.+++++ +||+|++||++|++|++.+.+.
T Consensus 547 ge~~~a~v~~~~~~~~----~~~~~l~~~~~~~l~~~~~~~p~~~~~v~~~~lP~t~~GKi~r~~l~~~~~~~ 615 (631)
T PRK07769 547 SEQLVIVAERAPGAHK----LDPQPIADDIRAAIAVRHGVTVRDVLLVPAGSIPRTSSGKIARRACRAAYLDG 615 (631)
T ss_pred CccEEEEEEecCcccc----ccHHHHHHHHHHHHHHHcCCCccEEEEECCCccccCCCcHHHHHHHHHHHHcC
Confidence 8899999998776321 5678999999999885 56 588888886 6999999999999999988754
No 66
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=1.3e-64 Score=529.56 Aligned_cols=499 Identities=24% Similarity=0.330 Sum_probs=414.3
Q ss_pred CCCCChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcE
Q 008636 11 SCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAI 90 (558)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (558)
+..+++.++|+++++ |+++|+++.++.+||+||.+++.++|..|.+.|+++|++|+++++|++++++++|||+++|++
T Consensus 22 ~~~~~~~~~~~~~a~--p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~v~~~n~~~~~~~~la~~~~G~v 99 (536)
T PRK10946 22 WQDLPLTDILTRHAA--SDAIAVICGERQFSYRELNQASDNLACSLRRQGIKPGDTALVQLGNVAEFYITFFALLKLGVA 99 (536)
T ss_pred ecCccHHHHHHHhhC--CCCeEEEeCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCChHHHHHHHHHHHHcCeE
Confidence 346789999999987 999999999999999999999999999999999999999999999999999999999999998
Q ss_pred EEeccccCChHHHHHHHhhcCccEEEEeCcCh----HHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCch
Q 008636 91 FNTINTRLDARTISIILKHSESKLVFVDHLSS----SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFV 166 (558)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (558)
++++.+.....++..+++.+++++++++.+.. ..+.+...... .....+....... .
T Consensus 100 ~v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~----------------~ 160 (536)
T PRK10946 100 PVNALFSHQRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEH---SSLRVVLLLNDDG----------------E 160 (536)
T ss_pred EecCCccccHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhC---CCceEEEEecCCC----------------C
Confidence 88777777788899999999999999986531 11111111111 1122222222110 1
Q ss_pred hhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhhh
Q 008636 167 DTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWS 246 (558)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~ 246 (558)
..+.++........ ...+..++++++++|||||||.||+|.++|+++..........+.+..++++++.+|++|..++.
T Consensus 161 ~~~~~~~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~ 239 (536)
T PRK10946 161 HSLDDAINHPAEDF-TATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICGFTPQTRYLCALPAAHNYPMS 239 (536)
T ss_pred ccHHHHhhCccccc-ccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCceEEEecCccccccch
Confidence 22333333222111 12235678999999999999999999999999988887777777889999999999999988874
Q ss_pred --HHHHHHHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc----cccCCCCceEEEEecCCCChhhhHH
Q 008636 247 --FTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP----EAKQLDRPVRILTAGSPPPAPVLLR 320 (558)
Q Consensus 247 --~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~----~~~~~~~l~~v~~~g~~l~~~~~~~ 320 (558)
.++.++..|+++++.+.+++..++++++++++|++.++|..+..+++.. ....+++++.+++||+++++.+.+.
T Consensus 240 ~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~l~~~~~~~ 319 (536)
T PRK10946 240 SPGALGVFLAGGTVVLAPDPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGSRAQLASLKLLQVGGARLSETLARR 319 (536)
T ss_pred hhhHHHHhhcCcEEEECCCCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCccccccceeEEEECCCCCCHHHHHH
Confidence 4778899999999988889999999999999999999999999997652 2345678999999999999999999
Q ss_pred hh-hcCCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCcee-cccceeeEeCCCCCcccCCCCCeeeEEEE
Q 008636 321 TE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRT-IGLTEVDIVDPETGLSVKRDGQTRGEIVM 398 (558)
Q Consensus 321 ~~-~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~i~d~~~~~~~~~~~~~~Gel~v 398 (558)
+. .+++++++.||+||++.. ..+.... ......++|.|. +++ .++|+|+ ++++++.| +.|||++
T Consensus 320 ~~~~~g~~~~~~YG~tE~~~~-~~~~~~~---------~~~~~~~~G~p~~~~~-~v~i~d~-~~~~~~~g--~~Gel~v 385 (536)
T PRK10946 320 IPAELGCQLQQVFGMAEGLVN-YTRLDDS---------DERIFTTQGRPMSPDD-EVWVADA-DGNPLPQG--EVGRLMT 385 (536)
T ss_pred HHHhcCCeEEEeeccccccee-eecCCCc---------cccccccCCcccCCCc-eEEEECC-CCCCCCCC--CccEEEE
Confidence 87 569999999999996433 2221111 112345788888 455 9999996 67888887 8899999
Q ss_pred ecccccccccCCchhhcccc-cCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEee
Q 008636 399 RGGSLMLGYLKDPEATSKCM-KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477 (558)
Q Consensus 399 ~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~ 477 (558)
+|+.++.||+++++.+...| .++||+|||+|++|++|.+++.||.+|+++.+|.+++|.+||+.|.++++|.++++++.
T Consensus 386 ~g~~~~~GY~~~~~~t~~~~~~d~~~~TGDl~~~d~~G~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~ 465 (536)
T PRK10946 386 RGPYTFRGYYKSPQHNASAFDANGFYCSGDLVSIDPDGYITVVGREKDQINRGGEKIAAEEIENLLLRHPAVIHAALVSM 465 (536)
T ss_pred ecCccchhhcCCcccchhhcccCCceecCceEEECCCCcEEEeccccceeecCCEEEcHHHHHHHHHhCCCcceEEEEcC
Confidence 99999999999999988887 58999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhc-CCCccccCeEEEecccCCCCCCcchhHHHHHHHhhcc
Q 008636 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRAR-IPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSMS 552 (558)
Q Consensus 478 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~-l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~~~ 552 (558)
+++..|+.+++++++.++ .+..++.+.+++. +++|++|..+.+++++|+|++||++|++|++++++..
T Consensus 466 ~~~~~g~~~~a~vv~~~~-------~~~~~l~~~~~~~~l~~~~~P~~~~~~~~iP~t~~GKv~r~~L~~~~~~~~ 534 (536)
T PRK10946 466 EDELMGEKSCAFLVVKEP-------LKAVQLRRFLREQGIAEFKLPDRVECVDSLPLTAVGKVDKKQLRQWLASRA 534 (536)
T ss_pred CCcccCceEEEEEEeCCC-------CCHHHHHHHHHhCCccccccCcEEEEeccCCCCCCCcccHHHHHHHHHhhc
Confidence 999888999999987654 5678899999876 9999999999999999999999999999999987754
No 67
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.7e-64 Score=531.61 Aligned_cols=510 Identities=24% Similarity=0.347 Sum_probs=408.5
Q ss_pred CChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhC-CCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEE
Q 008636 14 LTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSF-GINPGHVVSVIAPNIPAMYELHFAVPMSGAIFN 92 (558)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~-Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (558)
+++.++|++++..+|+++|+.+.++.+||.||.+++.++|.+|.+. |+++||+|+++++|++++++++|||+++|++++
T Consensus 24 ~~~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~la~~~~G~v~v 103 (562)
T PRK12492 24 KSVVEVFERSCKKFADRPAFSNLGVTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVFGALRAGLIVV 103 (562)
T ss_pred CcHHHHHHHHHHhCCCCeeEecCCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEe
Confidence 5899999999999999999999889999999999999999999985 999999999999999999999999999999999
Q ss_pred eccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCC-----------CCCCCCCC
Q 008636 93 TINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSS-----------SSPPPRIP 161 (558)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~ 161 (558)
++++..+.+++..+++.++++++++++.....+........ ...+............ ........
T Consensus 104 ~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (562)
T PRK12492 104 NTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQEVLPDTG----IEYLIEAKMGDLLPAAKGWLVNTVVDKVKKMVPAY 179 (562)
T ss_pred ccCccCCHHHHHHHHhccCceEEEeccccchHHHHhhhccC----ceEEEeechhhccccccchhccccccccccccccc
Confidence 99999999999999999999999998765554443322110 1111110000000000 00000000
Q ss_pred CCCchhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccc---------cCC-CC
Q 008636 162 PADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWV---------VPK-QS 231 (558)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~---------~~~-~~ 231 (558)
.......|.++............+...+++++|+|||||||.||+|+++|+++..........+. +.. .+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (562)
T PRK12492 180 HLPQAVPFKQALRQGRGLSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQPLMKEGQE 259 (562)
T ss_pred CCcccccHHHHHhccCCCCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhcccccccccccCCCe
Confidence 00011344444443322211122356689999999999999999999999998765544333221 222 35
Q ss_pred EEEEecCchhhhhhh-HHHHHHHhcceEEEec-CCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc--cccCCCCceEEE
Q 008636 232 VLLWTLPMFHNNGWS-FTWGAAVVGATNVCLR-KFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRPVRIL 307 (558)
Q Consensus 232 ~~~~~~p~~~~~g~~-~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~--~~~~~~~l~~v~ 307 (558)
+++..+|++|.+++. .++..+..|+..++.. ..++..+++.++++++|++.++|+++..+.+.. ....++++|.++
T Consensus 260 ~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~ 339 (562)
T PRK12492 260 VMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDHPGFKDLDFSALKLTN 339 (562)
T ss_pred EEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcCcccccccceeEEE
Confidence 778899999999984 4555667787766654 468899999999999999999999999998765 234567899999
Q ss_pred EecCCCChhhhHHhh-hcCCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCccc
Q 008636 308 TAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSV 386 (558)
Q Consensus 308 ~~g~~l~~~~~~~~~-~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~ 386 (558)
+||+++++.+.+.+. .+++++++.||+||+++++..+.... ....+++|.|.+++ .++|+|+ ++.++
T Consensus 340 ~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~----------~~~~~~~G~p~~~~-~v~ivd~-~~~~~ 407 (562)
T PRK12492 340 SGGTALVKATAERWEQLTGCTIVEGYGLTETSPVASTNPYGE----------LARLGTVGIPVPGT-ALKVIDD-DGNEL 407 (562)
T ss_pred eccccCCHHHHHHHHHHhCCceeeccCccccCceeeecCCcc----------cccCCccceecCCC-EEEEECC-CCCCC
Confidence 999999999999888 46999999999999988766543211 11235789999998 9999998 67888
Q ss_pred CCCCCeeeEEEEecccccccccCCchhhcccc-cCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhc
Q 008636 387 KRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM-KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYS 465 (558)
Q Consensus 387 ~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~ 465 (558)
+.+ +.|||+++|+.++.|||++++.+...| .+|||+|||+|+++++|.+++.||.+|+|+.+|.+|+|.+||+.|.+
T Consensus 408 ~~g--~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGD~g~~~~~G~l~i~GR~~~~i~~~G~~i~~~eIE~~l~~ 485 (562)
T PRK12492 408 PLG--ERGELCIKGPQVMKGYWQQPEATAEALDAEGWFKTGDIAVIDPDGFVRIVDRKKDLIIVSGFNVYPNEIEDVVMA 485 (562)
T ss_pred CCC--CceEEEEeCCccccccccCchhhhhcccCCCceecCcEEEECCCCeEEEecccCCeEEECCEEECHHHHHHHHHh
Confidence 877 789999999999999999999888887 47999999999999999999999999999999999999999999999
Q ss_pred CCCcceeEEEeeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHH
Q 008636 466 HPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLG 545 (558)
Q Consensus 466 ~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~ 545 (558)
+|.|.+++|++.+++..++.++++++..+.. ...+++.+++.++++.+++|..++++++||+|++||++|++|+
T Consensus 486 ~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~------~~~~~i~~~~~~~l~~~~~P~~i~~~~~~P~t~~GK~~r~~L~ 559 (562)
T PRK12492 486 HPKVANCAAIGVPDERSGEAVKLFVVARDPG------LSVEELKAYCKENFTGYKVPKHIVLRDSLPMTPVGKILRRELR 559 (562)
T ss_pred CCCeeEEEEEeccCCCCCceEEEEEEeCCCC------CCHHHHHHHHHHhcccccCCcEEEEeccCCCCCCCceeHHHHH
Confidence 9999999999999888888899888765432 4678999999999999999999999999999999999999999
Q ss_pred HH
Q 008636 546 DI 547 (558)
Q Consensus 546 ~~ 547 (558)
++
T Consensus 560 ~~ 561 (562)
T PRK12492 560 DI 561 (562)
T ss_pred hh
Confidence 76
No 68
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=2.8e-65 Score=550.54 Aligned_cols=500 Identities=19% Similarity=0.261 Sum_probs=398.3
Q ss_pred CCCChhhHHHHHhhcCCC-CceEEEC-CccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCc
Q 008636 12 CPLTPLGFIERAATACDD-CPSIIYN-DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGA 89 (558)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~-~~a~~~~-~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 89 (558)
+..|+.++|+++++++|+ ++|+.+. .+.+||+||.+++.++|++|.+. +++||+|+++++|++++++++|||+++|+
T Consensus 202 ~~~t~~~~l~~~~~~~p~~~~a~~~~~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~Val~~~n~~e~~~~~lA~~~~G~ 280 (718)
T PRK08043 202 PRETLYEALLSAQYRYGAGKPCIEDVNFTPDSYRKLLKKTLFVGRILEKY-SVEGERIGLMLPNATISAAVIFGASLRRR 280 (718)
T ss_pred CCCCHHHHHHHHHHHhCCCCcceEcCCCCcccHHHHHHHHHHHHHHHHHh-cCCCceEEEEcCCcHHHHHHHHHHHHcCC
Confidence 346899999999999998 5788764 37899999999999999999987 59999999999999999999999999999
Q ss_pred EEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhH
Q 008636 90 IFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTY 169 (558)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (558)
+++|+++.++.+++.+++++++++++|++.+...... . ...........++.+.+... ...........
T Consensus 281 v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~-~-~~~~~~~~~~~~i~~~~~~~---------~~~~~~~~~~~ 349 (718)
T PRK08043 281 IPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGK-L-WHLPEQLTQVRWVYLEDLKD---------DVTTADKLWIF 349 (718)
T ss_pred cccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhcc-C-CChhhhhccccEEEhhhhhh---------hcchhHHHHHH
Confidence 9999999999999999999999999999865433210 0 00000000011222111000 00000000000
Q ss_pred HHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhhh-HH
Q 008636 170 ENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWS-FT 248 (558)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~-~~ 248 (558)
.+.... . ....+..++|+++++|||||||.||+|.++|+++..........+++..+|++++.+|++|..++. .+
T Consensus 350 ~~~~~~---~-~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~g~~~~~ 425 (718)
T PRK08043 350 AHLLMP---R-LAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIADFTPNDRFMSALPLFHSFGLTVGL 425 (718)
T ss_pred HHHhCC---c-cccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhhCCCccCeEEEcCcchhhhhhHHHH
Confidence 011100 0 011234578999999999999999999999999988777666677889999999999999999984 57
Q ss_pred HHHHHhcceEEEecC-CCHHHHHHHHHHhCCcEEEehHHHHHHHhcCccccCCCCceEEEEecCCCChhhhHHhh-hcCC
Q 008636 249 WGAAVVGATNVCLRK-FDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAGSPPPAPVLLRTE-SLGF 326 (558)
Q Consensus 249 ~~~l~~g~~~~~~~~-~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~~l~~v~~~g~~l~~~~~~~~~-~~~~ 326 (558)
+.++..|+++++.+. +++..+++.++++++|++.++|+++..+.+......++++|.+++||+++++++.+.++ .+++
T Consensus 426 ~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~g~ 505 (718)
T PRK08043 426 FTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFANPYDFARLRYVVAGAEKLQESTKQLWQDKFGL 505 (718)
T ss_pred HHHHHcCCEEEEeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhcCcccccceEEEEEeCccCCHHHHHHHHHHcCC
Confidence 788999999998874 56788899999999999999999998887654445678999999999999999999988 5699
Q ss_pred eeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEeccccccc
Q 008636 327 IVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLG 406 (558)
Q Consensus 327 ~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~g 406 (558)
++++.||+||+++++..... .....+++|.|.++. +++|+|.+ +. + +.|||+++|++++.|
T Consensus 506 ~l~~~YG~TE~~~~~~~~~~-----------~~~~~~svG~p~pg~-~~~i~d~~-~~----~--~~Gel~v~g~~v~~G 566 (718)
T PRK08043 506 RILEGYGVTECAPVVSINVP-----------MAAKPGTVGRILPGM-DARLLSVP-GI----E--QGGRLQLKGPNIMNG 566 (718)
T ss_pred CeecccCcccccceEEecCC-----------cccCCCCCCCcCCCC-eeEEecCC-CC----C--CceEEEEecCCcccc
Confidence 99999999999876653221 012346899999998 99999863 32 2 459999999999999
Q ss_pred ccCC--chh-------hcc-cccCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEe
Q 008636 407 YLKD--PEA-------TSK-CMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476 (558)
Q Consensus 407 y~~~--~~~-------~~~-~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~ 476 (558)
||++ ++. +.. .+.+|||+|||+|++|+||++++.||++|+|+.+|++|+|.+||+.+.+++.+.+++|++
T Consensus 567 Y~~~e~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~I~~~G~~V~p~eIE~~l~~~~~~~~~avv~ 646 (718)
T PRK08043 567 YLRVEKPGVLEVPTAENARGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSPDKQHATAI 646 (718)
T ss_pred ccCCCCcccccccccccccccccCCeEecCCEEEEcCCCcEEEEecCCCeeEeCcEEcCHHHHHHHHHhCCccceEEEEE
Confidence 9983 432 111 235799999999999999999999999999999999999999999999999888899999
Q ss_pred eeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhc-CCCccccCeEEEecccCCCCCCcchhHHHHHHHhhcccc
Q 008636 477 RPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRAR-IPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSMSMS 554 (558)
Q Consensus 477 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~-l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~~~~~ 554 (558)
.+++..++.+++++. +.. .+.+++.++++++ ++.|++|..++++++||+|++||++|++|++++.+.+++
T Consensus 647 ~~~~~~ge~~v~~~~---~~~-----~~~~~l~~~~~~~~l~~~~vP~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~~~ 717 (718)
T PRK08043 647 KSDASKGEALVLFTT---DSE-----LTREKLQQYAREHGVPELAVPRDIRYLKQLPLLGSGKPDFVTLKSMVDEPEQH 717 (718)
T ss_pred ccCCCCCceEEEEEc---Ccc-----cCHHHHHHHHHhcCCCcccCCceEEEecccCcCCCCCcCHHHHHHHHhccccC
Confidence 998888888887763 211 5678899999887 999999999999999999999999999999999886654
No 69
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.6e-64 Score=529.62 Aligned_cols=521 Identities=26% Similarity=0.325 Sum_probs=418.6
Q ss_pred CCChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEE
Q 008636 13 PLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFN 92 (558)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (558)
.+++.++|+++++.+|+++|+.+.++.+||+||.+++.++|.+|.++|+++|++|+++++|+++++++++||+++|++++
T Consensus 32 ~~~l~~~l~~~a~~~p~~~al~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v 111 (567)
T PRK06178 32 ERPLTEYLRAWARERPQRPAIIFYGHVITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQFHIVFFGILKLGAVHV 111 (567)
T ss_pred cccHHHHHHHHHHHCCCceEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHHHHHHHHHHHhCeEEe
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCC--CCCCCCC----CCCch
Q 008636 93 TINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSS--SPPPRIP----PADFV 166 (558)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~----~~~~~ 166 (558)
|++|..+...+.++++.++++++++++...+.+.+...... ...++............ ....... ....+
T Consensus 112 ~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (567)
T PRK06178 112 PVSPLFREHELSYELNDAGAEVLLALDQLAPVVEQVRAETS----LRHVIVTSLADVLPAEPTLPLPDSLRAPRLAAAGA 187 (567)
T ss_pred ecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHhhccCC----cceEEEecccccccccccccccccccccccccccc
Confidence 99999999999999999999999999887776665543321 23333332111100000 0000000 00001
Q ss_pred hhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhccc-ccccCCCCEEEEecCchhhhhh
Q 008636 167 DTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLI-DWVVPKQSVLLWTLPMFHNNGW 245 (558)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~g~ 245 (558)
..+.+....... .....+...+++++++|||||||.||+|.+||.++......... .......++++..+|++|..|+
T Consensus 188 ~~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~ 266 (567)
T PRK06178 188 IDLLPALRACTA-PVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVAVVGGEDSVFLSFLPEFWIAGE 266 (567)
T ss_pred ccHHHHhhcccc-ccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHhccCCCCcEEEEecchHHHHHH
Confidence 111111111111 11112355789999999999999999999999998765443322 3457788999999999999987
Q ss_pred -hHHHHHHHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc--cccCCCCceEEEEe--cCCCChhhhHH
Q 008636 246 -SFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRPVRILTA--GSPPPAPVLLR 320 (558)
Q Consensus 246 -~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~--~~~~~~~l~~v~~~--g~~l~~~~~~~ 320 (558)
..++.++..|+++++.+.+++..++..++++++|.+.++|..+..+.... ....+++++.+..+ ++.+++...+.
T Consensus 267 ~~~~~~~l~~G~~~~l~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 346 (567)
T PRK06178 267 NFGLLFPLFSGATLVLLARWDAVAFMAAVERYRVTRTVMLVDNAVELMDHPRFAEYDLSSLRQVRVVSFVKKLNPDYRQR 346 (567)
T ss_pred HHHHHHHHHcCceEEEeCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCCCCCCcchheeeeeccccccCCHHHHHH
Confidence 45778899999999999899999999999999999999999999887654 23345677776543 58999999998
Q ss_pred hhh-cCCeeee-cccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEE
Q 008636 321 TES-LGFIVSH-GYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVM 398 (558)
Q Consensus 321 ~~~-~~~~v~~-~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v 398 (558)
+++ ++..++. .||+||+++.+......... .........++|.|.+++ +++|+|+++++.++.+ +.|||++
T Consensus 347 ~~~~~g~~~~~~~YG~tE~~~~~~~~~~~~~~----~~~~~~~~~~vG~p~~g~-~v~v~d~~~~~~~~~g--~~Gel~v 419 (567)
T PRK06178 347 WRALTGSVLAEAAWGMTETHTCDTFTAGFQDD----DFDLLSQPVFVGLPVPGT-EFKICDFETGELLPLG--AEGEIVV 419 (567)
T ss_pred HHHHhCCcccccccccccccccceeccccccC----ccccccCCcccccccCCc-EEEEEcCCCCCcCCCC--CceEEEE
Confidence 884 4666664 79999988654432211100 000112345689999998 9999997788888887 7899999
Q ss_pred ecccccccccCCchhhcccccCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeee
Q 008636 399 RGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478 (558)
Q Consensus 399 ~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~ 478 (558)
+|++++.||+++++.+...|.+|||+|||+++++++|.+++.||++|+|+.+|.+|+|.+||+.+.++++|.++++++.+
T Consensus 420 ~g~~v~~gY~~~~~~~~~~~~dg~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~eiE~~l~~~~~v~~~~v~~~~ 499 (567)
T PRK06178 420 RTPSLLKGYWNKPEATAEALRDGWLHTGDIGKIDEQGFLHYLGRRKEMLKVNGMSVFPSEVEALLGQHPAVLGSAVVGRP 499 (567)
T ss_pred ECCcccccccCChhhhhhcccCCceeecceEEEecCCeEEEEecccccEEECCEEECHHHHHHHHHhCCCeeEEEEEcCc
Confidence 99999999999999998888899999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHhhc
Q 008636 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSM 551 (558)
Q Consensus 479 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~~ 551 (558)
++..++.+++++++.++.. .+.+++.++++++++.+++|. +++++++|+|++||++|+.|++++++.
T Consensus 500 ~~~~g~~~~~~v~~~~~~~-----~~~~~l~~~~~~~l~~~~~p~-i~~v~~iP~t~~GKv~r~~l~~~~~~~ 566 (567)
T PRK06178 500 DPDKGQVPVAFVQLKPGAD-----LTAAALQAWCRENMAVYKVPE-IRIVDALPMTATGKVRKQDLQALAEEL 566 (567)
T ss_pred CcccCcceEEEEEeCCCCc-----CCHHHHHHHHHhcCcccCCce-EEEeccCCCCCccceeHHHHHHHHHhh
Confidence 8888889999998876543 578899999999999999996 888999999999999999999999875
No 70
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1e-64 Score=528.35 Aligned_cols=476 Identities=25% Similarity=0.346 Sum_probs=402.5
Q ss_pred CCCChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEE
Q 008636 12 CPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIF 91 (558)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 91 (558)
.+.++.+.|.+++..+|+++|+.+.++.+||+|+.+++.++|.+|.+.|+++||+|+++++|++++++++|||+++|+++
T Consensus 33 ~~~~~~~~~~~~a~~~p~~~a~~~~~~~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~v~ 112 (516)
T PRK13383 33 GGTNPYTLLAVTAARWPGRTAIIDDDGALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFVTAVFAVGLLGADV 112 (516)
T ss_pred cCCcHHHHHHHHHHHCCCCcEEEeCCCcEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEE
Confidence 57899999999999999999999988999999999999999999999999999999999999999999999999999999
Q ss_pred EeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhHHH
Q 008636 92 NTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYEN 171 (558)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (558)
+|+++.++.+++..+++.+++++++++++....+.... ..+..++... ....
T Consensus 113 vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~---------~~~~~~~~~~------------------~~~~- 164 (516)
T PRK13383 113 VPISTEFRSDALAAALRAHHISTVVADNEFAERIAGAD---------DAVAVIDPAT------------------AGAE- 164 (516)
T ss_pred EEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHHHhhh---------cceEEeccch------------------hhhh-
Confidence 99999999999999999999999999876554433321 1222221110 0000
Q ss_pred hhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHH--HHhcccccccCCCCEEEEecCchhhhhhhHHH
Q 008636 172 MLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFII--AVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTW 249 (558)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~ 249 (558)
.. ...+...++.++++|||||||.||+|.++|...... .......+++..+++++...|++|..|+..++
T Consensus 165 --~~------~~~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~ 236 (516)
T PRK13383 165 --ES------GGRPAVAAPGRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRTRLRTGSRISVAMPMFHGLGLGMLM 236 (516)
T ss_pred --cC------CCCCCCCCCCcEEEECCCCCCCCCeeeecchhhhhhhhHHhHHhhhccCCCCeEEEecCCcchhhHHHHH
Confidence 00 001123356789999999999999999999743211 12223345678899999999999999998888
Q ss_pred HHHHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCcc----ccCCCCceEEEEecCCCChhhhHHhh-hc
Q 008636 250 GAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE----AKQLDRPVRILTAGSPPPAPVLLRTE-SL 324 (558)
Q Consensus 250 ~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~----~~~~~~l~~v~~~g~~l~~~~~~~~~-~~ 324 (558)
.++..|+++++...++++.+++.++++++|.+.++|+++..+.+... ...++++|.+++||+++++++++++. .+
T Consensus 237 ~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~ 316 (516)
T PRK13383 237 LTIALGGTVLTHRHFDAEAALAQASLHRADAFTAVPVVLARILELPPRVRARNPLPQLRVVMSSGDRLDPTLGQRFMDTY 316 (516)
T ss_pred HHHhcCCEEEECCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHhccccccccCCCCceEEEEECCCCCCHHHHHHHHHHc
Confidence 89999999998888899999999999999999999999999987642 23467899999999999999999988 46
Q ss_pred CCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEeccccc
Q 008636 325 GFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLM 404 (558)
Q Consensus 325 ~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~ 404 (558)
+..+++.||+||++..+..+.. .......++|.+.++. .++|+|+ ++++++.+ +.|||+++|+.++
T Consensus 317 g~~v~~~YG~tE~~~~~~~~~~----------~~~~~~~~~G~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~g~~~~ 382 (516)
T PRK13383 317 GDILYNGYGSTEVGIGALATPA----------DLRDAPETVGKPVAGC-PVRILDR-NNRPVGPR--VTGRIFVGGELAG 382 (516)
T ss_pred Cchhhhcccccccccceecccc----------ccccCCCcccCCCCCc-EEEEECC-CCCCCCCC--CceEEEEecCccc
Confidence 8999999999999866554321 1112345789999998 9999997 67788777 7899999999999
Q ss_pred ccccCCchhhcccccCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCCCCCc
Q 008636 405 LGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQE 484 (558)
Q Consensus 405 ~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~ 484 (558)
.||++.+. ..+.+|||+|||+|+++++|++++.||++|+|+.+|.+|+|.+||+.|.++|.|.++++++.+++..++
T Consensus 383 ~~Y~~~~~---~~~~~g~~~TGDl~~~d~~G~l~i~GR~~~~i~~~G~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~~g~ 459 (516)
T PRK13383 383 TRYTDGGG---KAVVDGMTSTGDMGYLDNAGRLFIVGREDDMIISGGENVYPRAVENALAAHPAVADNAVIGVPDERFGH 459 (516)
T ss_pred ccccCCch---hheecCceecceeEEEcCCccEEEeccccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeccccccCc
Confidence 99998764 334689999999999999999999999999999999999999999999999999999999999988899
Q ss_pred eeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHH
Q 008636 485 IPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLG 545 (558)
Q Consensus 485 ~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~ 545 (558)
.+.++|++.++.. ...++++++++++++++++|..++++++||+|++||++|+.|+
T Consensus 460 ~~~~~v~~~~~~~-----~~~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~gKi~r~~L~ 515 (516)
T PRK13383 460 RLAAFVVLHPGSG-----VDAAQLRDYLKDRVSRFEQPRDINIVSSIPRNPTGKVLRKELP 515 (516)
T ss_pred eEEEEEEECCCCC-----CCHHHHHHHHHHhcccCCCCcEEEEeCCCCCCCCCcCcHHHhC
Confidence 9999999876544 5678999999999999999999999999999999999999874
No 71
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.7e-64 Score=532.37 Aligned_cols=518 Identities=28% Similarity=0.406 Sum_probs=416.2
Q ss_pred CChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEe
Q 008636 14 LTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNT 93 (558)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 93 (558)
+++.++|.+.+..+|+++|+++.++.+||+||.+++.++|..|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 24 ~~~~~~~~~~a~~~p~~~a~~~~~~~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vp 103 (563)
T PRK06710 24 QPLHKYVEQMASRYPEKKALHFLGKDITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQAVIGYYGTLLAGGIVVQ 103 (563)
T ss_pred ccHHHHHHHHHHHCCCceEEEecCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHcCeEEec
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccC-CC-------C----CCCCCC
Q 008636 94 INTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISS-SS-------S----PPPRIP 161 (558)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------~----~~~~~~ 161 (558)
++|..+.+++..+++.++++++++++.....+....... ....++.......... .. . ......
T Consensus 104 i~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (563)
T PRK06710 104 TNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNVQSAT----KIEHVIVTRIADFLPFPKNLLYPFVQKKQSNLVVKVS 179 (563)
T ss_pred cCcccCHHHHHHHHhccCCeEEEEeccchhhhhccchhh----ccceeEEeccccccccccccccchhhccccccccccc
Confidence 999999999999999999999999886554433221110 1122222111000000 00 0 000000
Q ss_pred CCCchhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhccc-ccccC-CCCEEEEecCc
Q 008636 162 PADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLI-DWVVP-KQSVLLWTLPM 239 (558)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~-~~~~~-~~~~~~~~~p~ 239 (558)
.......+..+....... ........+++++++|||||||.||+|.++|+++..+...... .+... ..+++++..|+
T Consensus 180 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~ 258 (563)
T PRK06710 180 ESETIHLWNSVEKEVNTG-VEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKEGEEVVLGVLPF 258 (563)
T ss_pred ccchhhhhhhhhhccccc-cccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCCCCCCceEEEeCch
Confidence 000011122221111111 0111123578999999999999999999999998754432222 22333 34688999999
Q ss_pred hhhhhhh-HHHHHHHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc--cccCCCCceEEEEecCCCChh
Q 008636 240 FHNNGWS-FTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRPVRILTAGSPPPAP 316 (558)
Q Consensus 240 ~~~~g~~-~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~--~~~~~~~l~~v~~~g~~l~~~ 316 (558)
+|..++. .++.+++.|+++++.+.+++..+++.++++++|++.++|+++..+++.. ....++++|.+++||++++++
T Consensus 259 ~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~v~~gg~~~~~~ 338 (563)
T PRK06710 259 FHVYGMTAVMNLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEYDISSIRACISGSAPLPVE 338 (563)
T ss_pred HHHHHHHHHHHHHHHcCCeEEEcCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCccccCChhhhhheeeCCCcCCHH
Confidence 9998874 4566888999999988889999999999999999999999999998765 233467899999999999999
Q ss_pred hhHHhhh-cCCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeE
Q 008636 317 VLLRTES-LGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGE 395 (558)
Q Consensus 317 ~~~~~~~-~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Ge 395 (558)
+..++.+ ++.++++.||+||++.++..+... .....+++|.+.++. .++++|++++..++.+ +.||
T Consensus 339 ~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~----------~~~~~~~~G~~~~~~-~~~i~~~~~~~~~~~g--~~Ge 405 (563)
T PRK06710 339 VQEKFETVTGGKLVEGYGLTESSPVTHSNFLW----------EKRVPGSIGVPWPDT-EAMIMSLETGEALPPG--EIGE 405 (563)
T ss_pred HHHHHHHhhCCCEecccccccCccccccCccc----------ccccCCccCCCCCCC-eEEEEECCCCccCCCC--CceE
Confidence 9999884 689999999999998765443210 112235789999987 8999997788888888 7899
Q ss_pred EEEecccccccccCCchhhcccccCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEE
Q 008636 396 IVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVV 475 (558)
Q Consensus 396 l~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~ 475 (558)
|+++|+.++.||+++++.+...|.+|||+|||+++++++|.+++.||.||+|+.+|.+|+|.+||+.|.++++|.+++|+
T Consensus 406 l~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGD~~~~~~~g~~~~~GR~dd~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~ 485 (563)
T PRK06710 406 IVVKGPQIMKGYWNKPEETAAVLQDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTI 485 (563)
T ss_pred EEEecCccchhhhCChHHHhhhcccCcccccceEEEcCCCcEEEeeccccEEEECCEEECHHHHHHHHHhCcceeeEEEE
Confidence 99999999999999999998888899999999999999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHhhcccc
Q 008636 476 GRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSMSMS 554 (558)
Q Consensus 476 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~~~~~ 554 (558)
+.+++..|+.++++++..++.. .+.+++.++++++++++++|..++++++||+|++||++|+.|++++..-...
T Consensus 486 ~~~~~~~g~~~~~~v~~~~~~~-----~~~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~GKi~r~~L~~~~~~~~~~ 559 (563)
T PRK06710 486 GVPDPYRGETVKAFVVLKEGTE-----CSEEELNQFARKYLAAYKVPKVYEFRDELPKTTVGKILRRVLIEEEKRKNED 559 (563)
T ss_pred ccccCCcCceeEEEEEECCCCC-----CCHHHHHHHHHHhcccccCCcEEEEcccCCCCccchhhHHHHHHHHhhcCcc
Confidence 9999888899999998877644 5788999999999999999999999999999999999999999998765443
No 72
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=5.5e-65 Score=587.35 Aligned_cols=519 Identities=20% Similarity=0.215 Sum_probs=406.9
Q ss_pred CCChhhHHHHHhhcCCCCceEEE---------CCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHH
Q 008636 13 PLTPLGFIERAATACDDCPSIIY---------NDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFA 83 (558)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~---------~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA 83 (558)
..++.++|+++++.+|+++|+++ .++++||+||.+++.++|++|.+.|+++|++|+|+++|++++++++||
T Consensus 235 ~~~l~~~~~~~a~~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~i~~~lA 314 (1389)
T TIGR03443 235 RGAIHDIFADNAEKHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDLVVAVMG 314 (1389)
T ss_pred cCcHHHHHHHHHHhCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHHHHHHHH
Confidence 45899999999999999999986 347899999999999999999999999999999999999999999999
Q ss_pred HhhcCcEEEeccccCChHHHHHHHhhcCccEEEEeCcC---hHHHHHHhhcCCC-CCCCCcEEEEcCCccccCCCCCCCC
Q 008636 84 VPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS---SSLLLEVVSLFPP-HSKTPKLVLITDDKEISSSSSPPPR 159 (558)
Q Consensus 84 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (558)
|+++|++++|++|.++.+++..+++.++++++|++.+. ...+......... ......+. +........ ....
T Consensus 315 ~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~ 390 (1389)
T TIGR03443 315 VLKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKELELRTEIPALA-LQDDGSLVG---GSLE 390 (1389)
T ss_pred HHhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhhhhhhcccccccccceEE-ecccccccc---cccc
Confidence 99999999999999999999999999999999987642 1111111111000 00011111 111100000 0000
Q ss_pred CCCCCchhhHHHhhcCCC--CCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEec
Q 008636 160 IPPADFVDTYENMLAKGD--PQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTL 237 (558)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (558)
....+...... ..........++++++|+|||||||.||||+++|+++.....+....+++.++++++...
T Consensus 391 -------~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~ 463 (1389)
T TIGR03443 391 -------GGETDVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRFGLSENDKFTMLS 463 (1389)
T ss_pred -------cccccccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEec
Confidence 00000000000 000111124578999999999999999999999999988877777788889999999999
Q ss_pred CchhhhhhhHHHHHHHhcceEEEecC---CCHHHHHHHHHHhCCcEEEehHHHHHHHhcCccccCCCCceEEEEecCCCC
Q 008636 238 PMFHNNGWSFTWGAAVVGATNVCLRK---FDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAGSPPP 314 (558)
Q Consensus 238 p~~~~~g~~~~~~~l~~g~~~~~~~~---~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~~l~~v~~~g~~l~ 314 (558)
|++|..++..++.+++.|+++++.+. .++..+++.++++++|++.++|++++.|.... ...++++|.+++||++++
T Consensus 464 ~~~~d~~~~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~-~~~~~~lr~~~~gGe~l~ 542 (1389)
T TIGR03443 464 GIAHDPIQRDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQA-TTPIPSLHHAFFVGDILT 542 (1389)
T ss_pred CceecchHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcc-cccCCCccEEEEecccCC
Confidence 99999888889999999999998764 36889999999999999999999999987543 345789999999999999
Q ss_pred hhhhHHhhhc--CCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCC-CcccCCCCC
Q 008636 315 APVLLRTESL--GFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPET-GLSVKRDGQ 391 (558)
Q Consensus 315 ~~~~~~~~~~--~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~-~~~~~~~~~ 391 (558)
.....++.+. ++++++.||+||++..+......................++|.+.+++ +++|+|+++ +.+++.|
T Consensus 543 ~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~-~~~ivd~~~~~~~~~~G-- 619 (1389)
T TIGR03443 543 KRDCLRLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGMKNV-QLLVVNRNDRTQTCGVG-- 619 (1389)
T ss_pred HHHHHHHHHhCCCCEEEECccCCccceeEEEEEccccccccchhhcccCcCcCCCccCCC-EEEEECCccCCCcCCCC--
Confidence 9999888754 789999999999987655432211100000000011234689999998 999999643 4677777
Q ss_pred eeeEEEEecccccccccCCchhhccccc-----------------------------CCceeeCceeEEccCCcEEEecc
Q 008636 392 TRGEIVMRGGSLMLGYLKDPEATSKCMK-----------------------------DGRYYTGDVGMMHPDGYLEIKDR 442 (558)
Q Consensus 392 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~-----------------------------~g~~~TGD~~~~~~~g~l~~~GR 442 (558)
+.|||+|+|+++++||+++|+.+.+.|. ++||+|||+|++++||.+++.||
T Consensus 620 ~~GEL~i~G~~v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~TGDlg~~~~dG~l~~~GR 699 (1389)
T TIGR03443 620 EVGEIYVRAGGLAEGYLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLGPRDRLYRTGDLGRYLPDGNVECCGR 699 (1389)
T ss_pred CceEEEecccccchhcCCChhHhhhhccCCcccCcccccccccccccccccccCCCccceeecCCceeEcCCCCEEEecc
Confidence 8899999999999999999999887762 57999999999999999999999
Q ss_pred cCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCCCCCceeEEEEEecCCCCCCC---------------------C
Q 008636 443 SKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGG---------------------M 501 (558)
Q Consensus 443 ~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~---------------------~ 501 (558)
+||+||++|++|+|.+||+.|.++|.|.+++|++.+++..+..+++++++..+..... .
T Consensus 700 ~dd~Iki~G~rI~p~eIE~~l~~~p~V~~a~v~~~~~~~~~~~lva~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1389)
T TIGR03443 700 ADDQVKIRGFRIELGEIDTHLSQHPLVRENVTLVRRDKDEEPTLVSYIVPQDKSDELEEFKSEVDDEESSDPVVKGLIKY 779 (1389)
T ss_pred cCCEEEeCcEEecHHHHHHHHHhCcchheeEEEEeeCCCCCeEEEEEEeccCccccccccccccccccccccchhhhhhh
Confidence 9999999999999999999999999999999999888877888999998763211000 0
Q ss_pred CCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHH
Q 008636 502 MTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGD 546 (558)
Q Consensus 502 ~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~ 546 (558)
....++++++++++||.|++|..++++++||+|++||++|++|++
T Consensus 780 ~~~~~~l~~~l~~~Lp~y~~P~~~~~~~~lP~t~~GKidr~~L~~ 824 (1389)
T TIGR03443 780 RKLIKDIREYLKKKLPSYAIPTVIVPLKKLPLNPNGKVDKPALPF 824 (1389)
T ss_pred hhhHHHHHHHHHhhCCcccCCceEEEcccCCCCCCccccHhhcCC
Confidence 012567899999999999999999999999999999999999964
No 73
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=4e-65 Score=544.61 Aligned_cols=522 Identities=23% Similarity=0.255 Sum_probs=398.1
Q ss_pred CCChhhHHHHHhhcCCCCceEEEC------------C-----------ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEE
Q 008636 13 PLTPLGFIERAATACDDCPSIIYN------------D-----------TTYTWSQTYRRCLQLASSLSSFGINPGHVVSV 69 (558)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~------------~-----------~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i 69 (558)
-.|+.++|++.++.+|+++|+.+. + ..+||+|+.+++.++|++|.++|+++||+|+|
T Consensus 57 ~~t~~~l~~~~~~~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai 136 (696)
T PLN02387 57 ATTLAALFEQSCKKYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVALGHNKEERVAI 136 (696)
T ss_pred CCCHHHHHHHHHHHCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence 359999999999999999999531 1 23899999999999999999999999999999
Q ss_pred EcCCchhHHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCcc
Q 008636 70 IAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKE 149 (558)
Q Consensus 70 ~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (558)
+++|+++|++++|||+++|++++|+++.++.+++.+++++++++++|++.+....+.+...... ....++.+++...
T Consensus 137 ~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~~~~~---~l~~ii~~~~~~~ 213 (696)
T PLN02387 137 FADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDISSQLE---TVKRVIYMDDEGV 213 (696)
T ss_pred EcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHHhhccC---CceEEEEECCCCc
Confidence 9999999999999999999999999999999999999999999999998877666655544332 2455666543211
Q ss_pred ccCCCCCCCCCCCCCchhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhccccc-ccC
Q 008636 150 ISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDW-VVP 228 (558)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~-~~~ 228 (558)
.... ............|.++...+...........++|+++|+|||||||.||||++||+++..........+ .+.
T Consensus 214 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~ 290 (696)
T PLN02387 214 DSDS---SLSGSSNWTVSSFSEVEKLGKENPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAGVMTVVPKLG 290 (696)
T ss_pred hhhh---hhhccCCcEEEEHHHHHHhhccCCCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHHHHhhcCCCC
Confidence 1000 000000111234555554433222222334679999999999999999999999999987766554433 578
Q ss_pred CCCEEEEecCchhhhhhhHHHHHHHhcceEEEecCCC--------HHHHHHHHHHhCCcEEEehHHHHHHHhcCccc---
Q 008636 229 KQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFD--------APTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--- 297 (558)
Q Consensus 229 ~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~~~--------~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~--- 297 (558)
++|++++.+|++|..++...+.++..|+++.+..... +..++..+++++||++.++|.+++.+.+....
T Consensus 291 ~~d~~l~~lPl~Hi~~~~~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l~~~~~~~~~ 370 (696)
T PLN02387 291 KNDVYLAYLPLAHILELAAESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRVRDGVRKKVD 370 (696)
T ss_pred CCCEEEEECcHHHHHHHHHHHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHHHHHHHHHHHHHHh
Confidence 8999999999999999877666777888776643211 23456789999999999999999988643200
Q ss_pred ---------------------------------------------c-CCCCceEEEEecCCCChhhhHHhh-hcCCeeee
Q 008636 298 ---------------------------------------------K-QLDRPVRILTAGSPPPAPVLLRTE-SLGFIVSH 330 (558)
Q Consensus 298 ---------------------------------------------~-~~~~l~~v~~~g~~l~~~~~~~~~-~~~~~v~~ 330 (558)
. ..+++|.+++||+++++++.+.++ .+|+++++
T Consensus 371 ~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~~~~~~~~g~~v~~ 450 (696)
T PLN02387 371 AKGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQRFINICLGAPIGQ 450 (696)
T ss_pred cccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHHcCCCeeE
Confidence 0 015899999999999999988887 46999999
Q ss_pred cccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCc-ccCCCCCeeeEEEEecccccccccC
Q 008636 331 GYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGL-SVKRDGQTRGEIVMRGGSLMLGYLK 409 (558)
Q Consensus 331 ~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~-~~~~~~~~~Gel~v~~~~~~~gy~~ 409 (558)
.||+||+++.++.+... ....+++|.|.+++ +++|+|.+++. .+.......|||+|+|++++.|||+
T Consensus 451 ~YG~TEt~~~~~~~~~~-----------~~~~gsvG~p~p~~-evkivd~~~~~~~~~~~~~p~GEi~vrGp~v~~GY~~ 518 (696)
T PLN02387 451 GYGLTETCAGATFSEWD-----------DTSVGRVGPPLPCC-YVKLVSWEEGGYLISDKPMPRGEIVIGGPSVTLGYFK 518 (696)
T ss_pred eechhhcccceeecCcc-----------cCCCCccCCCCCce-EEEEeeccccCcccCCCCCCCceEEeccCcccchhcC
Confidence 99999998766543211 12346899999998 99999943433 2211111459999999999999999
Q ss_pred Cchhhccccc---CC--ceeeCceeEEccCCcEEEecccCCeeee-CceeechHHHHHHHhcCCCcceeEEEeeeCCCCC
Q 008636 410 DPEATSKCMK---DG--RYYTGDVGMMHPDGYLEIKDRSKDVIIS-GGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQ 483 (558)
Q Consensus 410 ~~~~~~~~~~---~g--~~~TGD~~~~~~~g~l~~~GR~~d~i~~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~ 483 (558)
+|+.+.+.|. +| ||+|||+|++|+||++++.||++|+||. +|++|+|.+||++|.++|.|.+++|++.+..
T Consensus 519 ~pe~T~~~f~~d~~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~eIE~~l~~~p~V~~~~V~g~~~~--- 595 (696)
T PLN02387 519 NQEKTDEVYKVDERGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALSVSPYVDNIMVHADPFH--- 595 (696)
T ss_pred CHHHHhhhhccccCCCceeecCceEEECCCCcEEEEEcccceEECCCCeEEchHHHHHHHhcCCCeeEEEEEecCCc---
Confidence 9999998873 35 9999999999999999999999999996 7999999999999999999999999987532
Q ss_pred ceeEEEEEecCCCC-----CCC-----------CCCCHHHHHHHH-----HhcCCCccccCeEEEecccC------CCCC
Q 008636 484 EIPCAFVSLKTGTD-----SGG-----------MMTTEKDIIQYC-----RARIPRYMVPKTVVFIDELP------KTAT 536 (558)
Q Consensus 484 ~~~~~~v~~~~~~~-----~~~-----------~~~~~~~l~~~~-----~~~l~~~~~p~~i~~v~~~P------~t~~ 536 (558)
..++++|++.+... ..+ .....+++.+.+ +++|..+.+|+.|.++++-. +|++
T Consensus 596 ~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~~~~i~l~~~~~t~~~g~lT~t 675 (696)
T PLN02387 596 SYCVALVVPSQQALEKWAKKAGIDYSNFAELCEKEEAVKEVQQSLSKAAKAARLEKFEIPAKIKLLPEPWTPESGLVTAA 675 (696)
T ss_pred ceEEEEEEeCHHHHHHHHHHcCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEECCCCCCCCCcCChh
Confidence 34788888754310 000 001112233333 34699999999999986532 6788
Q ss_pred CcchhHHHHHHHhhccccc
Q 008636 537 GKVQKYVLGDIANSMSMSH 555 (558)
Q Consensus 537 GK~~r~~l~~~~~~~~~~~ 555 (558)
.|+.|..+++.|++.+..-
T Consensus 676 ~K~~R~~i~~~y~~~i~~l 694 (696)
T PLN02387 676 LKLKREQIRKKFKDDLKKL 694 (696)
T ss_pred hhhhhHHHHHHHHHHHHHH
Confidence 8999999999999877543
No 74
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6e-64 Score=527.61 Aligned_cols=512 Identities=27% Similarity=0.325 Sum_probs=412.5
Q ss_pred CCCCChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcE
Q 008636 11 SCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAI 90 (558)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (558)
..+.++.++|.++++++|+++|+++.++.+||+||.+++.++|.+|.+.|+++||+|+++++|++++++++|||+++|++
T Consensus 20 ~~~~~i~~~l~~~a~~~p~~~a~~~~~~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~ 99 (557)
T PRK07059 20 SQYPSLADLLEESFRQYADRPAFICMGKAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPVAIAAVLRAGYV 99 (557)
T ss_pred CCCCCHHHHHHHHHHHcCCCceEEEcCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCeE
Confidence 34478999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCC---------C--CC
Q 008636 91 FNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSP---------P--PR 159 (558)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~--~~ 159 (558)
++|++|..+.+++.++++.++++++|+++.....+.+..... ....+......... ..... . ..
T Consensus 100 ~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 174 (557)
T PRK07059 100 VVNVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQVLAKT----AVKHVVVASMGDLL-GFKGHIVNFVVRRVKKMVP 174 (557)
T ss_pred EeccCcccCHHHHHHHHHccCceEEEEchhhHHHHHHhhccc----CCceeEEecccccc-ccccccccccccccccccc
Confidence 999999999999999999999999999876655554443221 12222222211100 00000 0 00
Q ss_pred CCCCCchhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhccccc----cc---CCCCE
Q 008636 160 IPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDW----VV---PKQSV 232 (558)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~----~~---~~~~~ 232 (558)
.........+.+++..............++++++++|||||||.||+|.++|.++..+.......+ .. .....
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (557)
T PRK07059 175 AWSLPGHVRFNDALAEGARQTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEKKPRPDQLN 254 (557)
T ss_pred ccCCCCcccHHHHhhccCCCCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccccCCCCCcE
Confidence 000011233444444333222222345678999999999999999999999999876543322111 11 12356
Q ss_pred EEEecCchhhhhh-hHHHHHHHhcceEEEecC-CCHHHHHHHHHHhCCcEEEehHHHHHHHhcCcc--ccCCCCceEEEE
Q 008636 233 LLWTLPMFHNNGW-SFTWGAAVVGATNVCLRK-FDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE--AKQLDRPVRILT 308 (558)
Q Consensus 233 ~~~~~p~~~~~g~-~~~~~~l~~g~~~~~~~~-~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~--~~~~~~l~~v~~ 308 (558)
+++.+|++|..++ ...+.++..|++.++.+. .++..+++.++++++|.+.++|.++..+..... ...+++++.++.
T Consensus 255 ~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~ 334 (557)
T PRK07059 255 FVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNNPDFDKLDFSKLIVANG 334 (557)
T ss_pred EEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCcCcCcCCchhheEEEe
Confidence 7888999998886 456677788888777663 578999999999999999999999999987652 334668999999
Q ss_pred ecCCCChhhhHHhh-hcCCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccC
Q 008636 309 AGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVK 387 (558)
Q Consensus 309 ~g~~l~~~~~~~~~-~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~ 387 (558)
||+++++.+.+.+. .+++++++.||+||++.++..+.... .....++|.|.++. .++|+|+ ++.+++
T Consensus 335 gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~----------~~~~~~vG~p~~g~-~v~i~d~-~~~~~~ 402 (557)
T PRK07059 335 GGMAVQRPVAERWLEMTGCPITEGYGLSETSPVATCNPVDA----------TEFSGTIGLPLPST-EVSIRDD-DGNDLP 402 (557)
T ss_pred ccccCCHHHHHHHHHHhCCCeeeccccccccchhhcCCCCC----------CCcCCcccCccCCc-EEEEECC-CCCCCC
Confidence 99999999998887 46999999999999988765543111 12245789999988 9999997 678888
Q ss_pred CCCCeeeEEEEecccccccccCCchhhcccc-cCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcC
Q 008636 388 RDGQTRGEIVMRGGSLMLGYLKDPEATSKCM-KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSH 466 (558)
Q Consensus 388 ~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~ 466 (558)
.+ +.|||+++|+.++.||+++++.+...| .+|||+|||+++++++|.+++.||++|+|+.+|.+|+|.+||+.|.++
T Consensus 403 ~g--~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~p~~iE~~l~~~ 480 (557)
T PRK07059 403 LG--EPGEICIRGPQVMAGYWNRPDETAKVMTADGFFRTGDVGVMDERGYTKIVDRKKDMILVSGFNVYPNEIEEVVASH 480 (557)
T ss_pred CC--CceEEEEeCCccchhhhcCHHHHhhhcccCCceecCcEEEEcCCCcEEEecccccceEECCEEEcHHHHHHHHHhC
Confidence 87 789999999999999999999888776 589999999999999999999999999999999999999999999999
Q ss_pred CCcceeEEEeeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHH
Q 008636 467 PMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGD 546 (558)
Q Consensus 467 ~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~ 546 (558)
++|.+++|++.+++..++.++++++..+.. .+.+++++++.++++.+.+|..+++++++|+|++||++|+.|++
T Consensus 481 ~~V~~~~v~~~~~~~~ge~~~~~v~~~~~~------~~~~~l~~~~~~~l~~~~~P~~i~~v~~~P~t~~GK~~r~~L~~ 554 (557)
T PRK07059 481 PGVLEVAAVGVPDEHSGEAVKLFVVKKDPA------LTEEDVKAFCKERLTNYKRPKFVEFRTELPKTNVGKILRRELRD 554 (557)
T ss_pred CceeEEEEEecccCCCCeeEEEEEEeCCCC------CCHHHHHHHHHHhcccccCCcEEEEeccCCCCcccceeHHHHHh
Confidence 999999999999988888899888865432 56789999999999999999999999999999999999999987
Q ss_pred H
Q 008636 547 I 547 (558)
Q Consensus 547 ~ 547 (558)
+
T Consensus 555 ~ 555 (557)
T PRK07059 555 G 555 (557)
T ss_pred h
Confidence 5
No 75
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.4e-64 Score=533.55 Aligned_cols=504 Identities=21% Similarity=0.229 Sum_probs=396.5
Q ss_pred CCCCCCChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcC
Q 008636 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSG 88 (558)
Q Consensus 9 ~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G 88 (558)
.+..+.|+.++|.++++++|+++|+++.++.+||+||.+++.++|.+|.+.|+++||+|+++++|++++++++|||+++|
T Consensus 32 ~~~~~~tl~~~l~~~a~~~p~~~Ai~~~~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v~~~lA~~~~G 111 (600)
T PRK08279 32 TPDSKRSLGDVFEEAAARHPDRPALLFEDQSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYLAAWLGLAKLG 111 (600)
T ss_pred CCCCcccHHHHHHHHHHhCCCCcEEEeCCCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcC
Confidence 45677899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhh
Q 008636 89 AIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT 168 (558)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (558)
++++++++..+.+++..+++.++++++|++.+....+.+...... ....+...+..... . ...+..
T Consensus 112 ~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~----~------~~~~~~ 177 (600)
T PRK08279 112 AVVALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFEEARADLA----RPPRLWVAGGDTLD----D------PEGYED 177 (600)
T ss_pred cEEeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHhhhhc----ccceEEEecCcccc----c------cccHHH
Confidence 999999999999999999999999999999887766655543322 11222222211100 0 001222
Q ss_pred HHHhhcCCCCC-CCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhhhH
Q 008636 169 YENMLAKGDPQ-FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSF 247 (558)
Q Consensus 169 ~~~~~~~~~~~-~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~ 247 (558)
+.+........ .........+++++|+|||||||.||+|.++|+++..........+.+.++++++..+|++|..++..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~l~~~d~~l~~~pl~h~~g~~~ 257 (600)
T PRK08279 178 LAAAAAGAPTTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLLRLTPDDVLYCCLPLYHNTGGTV 257 (600)
T ss_pred HhhhcccCCccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhcCCCCCcEEEEecCchhhhhHHH
Confidence 22222211111 11112345789999999999999999999999999988887777788999999999999999998854
Q ss_pred -HHHHHHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCcccc--CCCCceEEEEecCCCChhhhHHhh-h
Q 008636 248 -TWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK--QLDRPVRILTAGSPPPAPVLLRTE-S 323 (558)
Q Consensus 248 -~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~--~~~~l~~v~~~g~~l~~~~~~~~~-~ 323 (558)
++.++..|+++++.+.+++..+++.++++++|++.++|++++.+++..... ...+++. ++|+.+++.+++.+. .
T Consensus 258 ~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~~~~~~~l~~--~~g~~l~~~~~~~~~~~ 335 (600)
T PRK08279 258 AWSSVLAAGATLALRRKFSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKPTDRDHRLRL--MIGNGLRPDIWDEFQQR 335 (600)
T ss_pred HHHHHHhcCcEEEEcCCCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCccccCcceeE--EecCCCCHHHHHHHHHH
Confidence 555677888888888899999999999999999999999999988765222 2335554 457889999998888 4
Q ss_pred cCC-eeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceec----ccc--------eeeEeCCCCCc--ccCC
Q 008636 324 LGF-IVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTI----GLT--------EVDIVDPETGL--SVKR 388 (558)
Q Consensus 324 ~~~-~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----~~~--------~~~i~d~~~~~--~~~~ 388 (558)
++. .+++.||+||++....... ....++|.+.. +.. ...+.+. ++. .++.
T Consensus 336 ~~~~~l~~~YG~tE~~~~~~~~~--------------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~ 400 (600)
T PRK08279 336 FGIPRILEFYAASEGNVGFINVF--------------NFDGTVGRVPLWLAHPYAIVKYDVDTGEPVRDA-DGRCIKVKP 400 (600)
T ss_pred hCcceeeeeecccccceeecccC--------------CCCcccccccccccccceeeeeccCcCceeeCC-CCccccCCC
Confidence 554 5999999999875332211 11123444333 221 1223332 222 3444
Q ss_pred CCCeeeEEE--EecccccccccCCchhhcccc-------cCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHH
Q 008636 389 DGQTRGEIV--MRGGSLMLGYLKDPEATSKCM-------KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEI 459 (558)
Q Consensus 389 ~~~~~Gel~--v~~~~~~~gy~~~~~~~~~~~-------~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~i 459 (558)
+ +.||++ +.+++++.|| +++..+...| .++||+|||+|++++||.+++.||.||+||++|++|+|.+|
T Consensus 401 g--~~Gel~~~i~~~~~~~GY-~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~dG~l~~~GR~~d~ik~~G~~i~p~eI 477 (600)
T PRK08279 401 G--EVGLLIGRITDRGPFDGY-TDPEASEKKILRDVFKKGDAWFNTGDLMRDDGFGHAQFVDRLGDTFRWKGENVATTEV 477 (600)
T ss_pred C--CceeEEEEecCccccccc-CCchhhHHHHhhcccCCCCceEeecceEEEcCCccEEEecccCCeEEECCcccCHHHH
Confidence 4 789998 7799999999 8887776554 25799999999999999999999999999999999999999
Q ss_pred HHHHhcCCCcceeEEEeeeCCCC-CceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCc
Q 008636 460 ESVLYSHPMVNEAAVVGRPDPFW-QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538 (558)
Q Consensus 460 E~~l~~~~~v~~~~v~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK 538 (558)
|+.|.++|+|.+|+|++++.+.. +...+++++..++.. ...++++++++++|++|++|+.++++++||+|.+||
T Consensus 478 E~~l~~~p~V~~a~v~gv~~~~~~~~~~~~~vv~~~~~~-----~~~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GK 552 (600)
T PRK08279 478 ENALSGFPGVEEAVVYGVEVPGTDGRAGMAAIVLADGAE-----FDLAALAAHLYERLPAYAVPLFVRLVPELETTGTFK 552 (600)
T ss_pred HHHHhcCCCcceEEEEEeecCCCCCccceeEEEecCCcc-----CCHHHHHHHHHhhCccccCCeEEEeecCCCCCcchh
Confidence 99999999999999999876643 444556666654333 678899999999999999999999999999999999
Q ss_pred chhHHHHHHHhhc
Q 008636 539 VQKYVLGDIANSM 551 (558)
Q Consensus 539 ~~r~~l~~~~~~~ 551 (558)
++|..|++++.+.
T Consensus 553 i~r~~L~~~~~~~ 565 (600)
T PRK08279 553 YRKVDLRKEGFDP 565 (600)
T ss_pred hhHHHHhhcCCCc
Confidence 9999999987766
No 76
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=7.5e-66 Score=631.03 Aligned_cols=490 Identities=20% Similarity=0.241 Sum_probs=421.1
Q ss_pred CCCChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEE
Q 008636 12 CPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIF 91 (558)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 91 (558)
...++.++|+++++++|+++|+++.++++||+||.++++++|+.|.++|+++|++|+|++++++++++++|||+++|+++
T Consensus 3093 ~~~~~~~l~~~~a~~~p~~~Av~~~~~~lTY~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~vv~~lavl~aGa~~ 3172 (3956)
T PRK12467 3093 SERLVHQLIEAQVARTPEAPALVFGDQQLSYAELNRRANRLAHRLIAIGVGPDVLVGVAVERSVEMIVALLAVLKAGGAY 3172 (3956)
T ss_pred ccccHHHHHHHHHHhCCCcceEeeCCcccCHHHHHHHHHHHHHHHHHcCCCCCCeEEEEeCCCHHHHHHHHHHHhhCcEe
Confidence 34699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhHHH
Q 008636 92 NTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYEN 171 (558)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (558)
+|++|.++.+++..+++.++++++|++......+... ....++.++....
T Consensus 3173 vpld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~~~~--------~~~~~~~~~~~~~---------------------- 3222 (3956)
T PRK12467 3173 VPLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQLPAP--------AGDTALTLDRLDL---------------------- 3222 (3956)
T ss_pred ecCCCCChHHHHHHHHhCCCCcEEEechhhhhhcccc--------cCCceeeecchhh----------------------
Confidence 9999999999999999999999999987543322110 0111222211100
Q ss_pred hhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhhhHHHHH
Q 008636 172 MLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGA 251 (558)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~ 251 (558)
.............++++++|+|||||||.||||+++|+++..........++++++|+++...|++|..+...++.+
T Consensus 3223 ---~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~ 3299 (3956)
T PRK12467 3223 ---NGYSENNPSTRVMGENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAEAYELDANDRVLLFMSFSFDGAQERFLWT 3299 (3956)
T ss_pred ---cccCCCCCcccCCCCceEEEEEccCCCCCcceeeehhHHHHHHHHHHHHhcCCCcCCEEEEecCccHhHHHHHHHHH
Confidence 00001111123567899999999999999999999999999988888888899999999999999999999899999
Q ss_pred HHhcceEEEecC--CCHHHHHHHHHHhCCcEEEehHHHHHHHhcCccccCCCCceEEEEecCCCChhhhHHhhh-c-CCe
Q 008636 252 AVVGATNVCLRK--FDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAGSPPPAPVLLRTES-L-GFI 327 (558)
Q Consensus 252 l~~g~~~~~~~~--~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~~l~~v~~~g~~l~~~~~~~~~~-~-~~~ 327 (558)
++.|+++++.+. .++..+++.++++++|++.++|++++.+++......++++|.+++|||++++++.+++.+ + ++.
T Consensus 3300 L~~G~~l~i~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~lr~~~~gGe~~~~~~~~~~~~~~~~~~ 3379 (3956)
T PRK12467 3300 LICGGCLVVRDNDLWDPEELWQAIHAHRISIACFPPAYLQQFAEDAGGADCASLDIYVFGGEAVPPAAFEQVKRKLKPRG 3379 (3956)
T ss_pred HhCCCEEEECCcccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhcccccCCCCceEEEEecCCCCHHHHHHHHHhCCCCE
Confidence 999999999875 689999999999999999999999999987766667889999999999999999999874 3 688
Q ss_pred eeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecccccccc
Q 008636 328 VSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGY 407 (558)
Q Consensus 328 v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy 407 (558)
+++.||+||++..++......+ ........++|.|.++. +++|+|+ ++++++.| +.|||+|+|+++++||
T Consensus 3380 l~n~YG~TE~~~~~~~~~~~~~------~~~~~~~~~iG~p~~~~-~~~v~d~-~~~~vp~G--~~GEL~i~G~~v~~GY 3449 (3956)
T PRK12467 3380 LTNGYGPTEAVVTVTLWKCGGD------AVCEAPYAPIGRPVAGR-SIYVLDG-QLNPVPVG--VAGELYIGGVGLARGY 3449 (3956)
T ss_pred EEeCcccchhEeeeEEEecccc------cccCCCCCCCccccCCC-EEEEECC-CCCCCCCC--CCceEEEcchhhhhhc
Confidence 9999999999876654332111 00112235799999998 9999997 68899888 8899999999999999
Q ss_pred cCCchhhccccc-C-------CceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeC
Q 008636 408 LKDPEATSKCMK-D-------GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479 (558)
Q Consensus 408 ~~~~~~~~~~~~-~-------g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~ 479 (558)
+++|+.+.+.|. + +||+|||+|++++||.+++.||+|++||++|++|+|.+||+.|.++|+|.+++|++.+.
T Consensus 3450 ~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rIe~~EIE~~l~~~p~V~~a~v~~~~~ 3529 (3956)
T PRK12467 3450 HQRPSLTAERFVADPFSGSGGRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFRIELGEIEARLLQHPSVREAVVLARDG 3529 (3956)
T ss_pred cCCcccchhhccCCCCCCCCceeeccchhheecCCCcEEEeccccceEeeceEeecHHHHHHHHhhCcccceEEEEEecC
Confidence 999999998883 2 37999999999999999999999999999999999999999999999999999998754
Q ss_pred CCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHhh
Q 008636 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANS 550 (558)
Q Consensus 480 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~ 550 (558)
..++.++++++...... ...++++++++++||.|++|..|+++++||+|++||++|++|++...+
T Consensus 3530 -~~~~~lva~v~~~~~~~-----~~~~~l~~~l~~~Lp~y~vP~~~~~l~~lP~t~~GKidR~~L~~~~~~ 3594 (3956)
T PRK12467 3530 -AGGKQLVAYVVPADPQG-----DWRETLRDHLAASLPDYMVPAQLLVLAAMPLGPNGKVDRKALPDPDAK 3594 (3956)
T ss_pred -CCCcEEEEEEeCCCCCc-----ccHHHHHHHHhccCChhhCCCeeeeeccCCCCCCCccchhhcCCCCcc
Confidence 45788999999876533 577899999999999999999999999999999999999999986554
No 77
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=2e-63 Score=521.78 Aligned_cols=511 Identities=25% Similarity=0.371 Sum_probs=409.7
Q ss_pred CCCChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEE
Q 008636 12 CPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIF 91 (558)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 91 (558)
++.|+.++|+++++.+|+++|+.+.++.+||.||.+++.++|.+|.+.|+++||+|+++++|++++++++|||+++|+++
T Consensus 19 ~~~~~~~~~~~~~~~~p~~~a~~~~~~~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~~~ 98 (541)
T TIGR03205 19 ARGTLPDLLSKAAADYGPRPALEFRDRPITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHPINFFGALKAGARV 98 (541)
T ss_pred CCCCHHHHHHHHHHHcCCCceEEECCcEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEE
Confidence 45599999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccccCChHHHHHHHhhcCccEEEEeCcC--hHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhH
Q 008636 92 NTINTRLDARTISIILKHSESKLVFVDHLS--SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTY 169 (558)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (558)
+|++|..+.+++..+++.++++++|+++.. .....+.... .....+++........ ................+
T Consensus 99 v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 173 (541)
T TIGR03205 99 VHLSPLDGERALSHKLSDSGARLLITSDLAALLPMALKFLEK----GLLDRLIVCEDDNWGK-VGTPQAPIPADPRIVTY 173 (541)
T ss_pred EecCCCCCHHHHHHHHhhcCceEEEEeCchhhhHHHHHhhhc----ccceEEEEeccccccc-ccccccccCCCcccccH
Confidence 999999999999999999999999997631 1111111111 1122333333221100 00000001111113445
Q ss_pred HHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhccc-----ccccCCCCEEEEecCchhhhh
Q 008636 170 ENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLI-----DWVVPKQSVLLWTLPMFHNNG 244 (558)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~-----~~~~~~~~~~~~~~p~~~~~g 244 (558)
.+++........ .....++++++++|||||||.||+|.++|+++......... .......+++++..|++|..+
T Consensus 174 ~~~~~~~~~~~~-~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~ 252 (541)
T TIGR03205 174 ADFVKGAAAPAE-WPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIYDVWGKPSRATRGDVERVICVLPLFHIYA 252 (541)
T ss_pred HHHHhcCCCCCC-CCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHhhcccccccCCCCceEEEeccHHHHHH
Confidence 555443221111 12345789999999999999999999999998654332111 112234578999999999888
Q ss_pred hh-HHHHHHHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc--cccCCCCceEEEEecCCCChhhhHHh
Q 008636 245 WS-FTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRPVRILTAGSPPPAPVLLRT 321 (558)
Q Consensus 245 ~~-~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~--~~~~~~~l~~v~~~g~~l~~~~~~~~ 321 (558)
+. .++.++..|+++++...+++..+++.|+++++|++.++|+++..|++.. ....+++++.++.||+++++.+.+++
T Consensus 253 ~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~i~~gg~~~~~~~~~~~ 332 (541)
T TIGR03205 253 LTVILLRSLRRGDLISLHQRFDVAAVFRDIEEKRATVFPGVPTMWIALANDPSLEKRDLSSLATIGSGGAPLPVEVANFF 332 (541)
T ss_pred HHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCeEeechHHHHHHHHhCccccccCccccceEEEccccCCHHHHHHH
Confidence 74 4677888999988888889999999999999999999999999998754 33456789999999999999999888
Q ss_pred h-hcCCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeC-CCCCcccCCCCCeeeEEEEe
Q 008636 322 E-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVD-PETGLSVKRDGQTRGEIVMR 399 (558)
Q Consensus 322 ~-~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d-~~~~~~~~~~~~~~Gel~v~ 399 (558)
. .++.++++.||+||++..+..+.... .....++|.+.++. .++|.+ +++++.++.+ +.|||+++
T Consensus 333 ~~~~~~~~~~~YG~TE~~~~~~~~~~~~----------~~~~~~~G~~~~~~-~~~v~~~d~~~~~~~~g--~~Gel~v~ 399 (541)
T TIGR03205 333 ERKTGLKLKSGWGMTETCSPGTGHPPEG----------PDKPGSIGLMLPGI-ELDVVSLDDPTKVLPPG--EVGELRIR 399 (541)
T ss_pred HHHhCCCeecccccccCCcccccCCCCC----------CCCCCCcceeccCc-eeEEEecCCCCccCCCC--CeeEEEEe
Confidence 7 45899999999999987766543211 11235788888887 887764 3467777776 78999999
Q ss_pred cccccccccCCchhhcccccCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeC
Q 008636 400 GGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479 (558)
Q Consensus 400 ~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~ 479 (558)
|++++.||+++++.+...|.++||+|||+++++++|.+++.||.+|+|+.+|.+|+|.+||+.+.++++|.+++|++.++
T Consensus 400 ~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~GR~~~~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~ 479 (541)
T TIGR03205 400 GPNVTRGYWNRPEESAEAFVGDRFLTGDIGYMDTDGYFFLVDRKKDMIISGGFNVYPQMIEQAIYEHPGVQEVIVIGIPD 479 (541)
T ss_pred cCCccccccCChhhhHhhhccCCcccCceEEEcCCceEEEEccccCeEEECCEEECHHHHHHHHHhCCCeeeEEEEecCC
Confidence 99999999999999988888999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHH
Q 008636 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLG 545 (558)
Q Consensus 480 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~ 545 (558)
+..++.+++++++.++... .+.+++.++++++|+++++|+.++++++||+|++||++|++|+
T Consensus 480 ~~~~~~~~~~v~~~~~~~~----~~~~~l~~~~~~~l~~~~~P~~i~~~~~iP~t~~gK~~r~~l~ 541 (541)
T TIGR03205 480 QYRGEAAKAFVKLRPGAKP----FSLDELRAFLAGKLGKHELPVAVEFVDELPRTPVGKLSRHELR 541 (541)
T ss_pred cccCceEEEEEEECCCCCc----CCHHHHHHHHHhhcccccCCcEEEEeccCCCCcccceeHhhcC
Confidence 8888889999988765321 4678899999999999999999999999999999999999874
No 78
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=7.1e-65 Score=529.77 Aligned_cols=486 Identities=21% Similarity=0.226 Sum_probs=378.7
Q ss_pred CC-hhhHHHHHhhcCCCCceEEECC----ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcC
Q 008636 14 LT-PLGFIERAATACDDCPSIIYND----TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSG 88 (558)
Q Consensus 14 ~t-l~~~l~~~a~~~p~~~a~~~~~----~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G 88 (558)
|| +.+.|+++++++|+++|+.+.+ +++||+||.++++++|++|.++ ++||+|+|+++|++++++++|||+++|
T Consensus 1 ~~~~~~~l~~~~~~~~~~~a~~~~~~~~~~~~ty~el~~~~~~lA~~L~~~--~~g~~V~l~~~~~~e~~~~~la~~~~G 78 (525)
T PRK05851 1 MNELAAALSDAMTASGRDLVVLDRESGLWRRHPWPEVHGRAENVAARLLDR--DRPGAVGLVGEPTVELVAAIQGAWLAG 78 (525)
T ss_pred CchHHHHHHHHhcCCCCceEEeCCCCCcceeecHHHHHHHHHHHHHHHHhc--CCCCeEEEEcCCCHHHHHHHHHHHHcC
Confidence 44 8889999999999999999976 7899999999999999999988 799999999999999999999999999
Q ss_pred cEEEecccc--------CChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCC
Q 008636 89 AIFNTINTR--------LDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRI 160 (558)
Q Consensus 89 ~~~v~l~~~--------~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (558)
+++++ ++. ...+.+..+++.++++++|++.+....+...... +. +.+..
T Consensus 79 ~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~---------~~-~~~~~------------ 135 (525)
T PRK05851 79 AAVSI-LPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVDSS---------VT-VHDLA------------ 135 (525)
T ss_pred CCCcC-CCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhhcc---------cc-ccccc------------
Confidence 98653 332 1234556678999999999987654443332110 00 00000
Q ss_pred CCCCchhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccC-CCCEEEEecCc
Q 008636 161 PPADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVP-KQSVLLWTLPM 239 (558)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~ 239 (558)
........ ....+..++++++|+|||||||.||+|.++|+++..........+++. .+|++++..|+
T Consensus 136 ----------~~~~~~~~--~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~d~~l~~~pl 203 (525)
T PRK05851 136 ----------TAAHTNRS--ASLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARVGLDAATDVGCSWLPL 203 (525)
T ss_pred ----------cccccccc--ccCCCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCCCCeEEEcCCC
Confidence 00000000 000124568999999999999999999999999988777777777887 89999999999
Q ss_pred hhhhhhhHHHHHHHhcceEEEecC--C--CHHHHHHHHHHhCCcEEEehHHHHHHHhcCc---cccCCCCceEEEEecCC
Q 008636 240 FHNNGWSFTWGAAVVGATNVCLRK--F--DAPTVFALIRKHGVTHMCGAPIVLNLLSSSP---EAKQLDRPVRILTAGSP 312 (558)
Q Consensus 240 ~~~~g~~~~~~~l~~g~~~~~~~~--~--~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~---~~~~~~~l~~v~~~g~~ 312 (558)
+|.+++..++.+++.|+++++.+. + ++..+++.++++++|++...|.++..+.+.. ....++++|.+++||++
T Consensus 204 ~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~~~~~~~~l~~lr~~~~gG~~ 283 (525)
T PRK05851 204 YHDMGLAFLLTAALAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYARRVSDVDLGALRVALNGGEP 283 (525)
T ss_pred ccCccHHHHHHHHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhhccccCCCHHHhheeEecccc
Confidence 999999888899999999998763 3 5788999999999998866565555554322 23456789999999999
Q ss_pred CChhhhHHhhh----cCC---eeeecccCCCCCCcccccCCCCCC--CCCC--hhhhhhhcccCCceecccceeeEeCCC
Q 008636 313 PPAPVLLRTES----LGF---IVSHGYGKTEIAGVNVSCAWKPKW--NKLP--ARERASLKARQGVRTIGLTEVDIVDPE 381 (558)
Q Consensus 313 l~~~~~~~~~~----~~~---~v~~~YG~tE~g~~~~~~~~~~~~--~~~~--~~~~~~~~~~~g~~~~~~~~~~i~d~~ 381 (558)
+++++.+++.+ +|+ .+++.||+||++..+......... .... .........++|.|.+++ +++|+|++
T Consensus 284 l~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~-~v~i~d~~ 362 (525)
T PRK05851 284 VDCDGFERFATAMAPFGFDAGAAAPSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIPGM-EVRISPGD 362 (525)
T ss_pred CCHHHHHHHHHHHhhcCCChhhcccccchhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCCCc-EEEEECCC
Confidence 99999888764 344 489999999997655432211000 0000 000112345789999998 99999986
Q ss_pred CCcccCCCCCeeeEEEEecccccccccCCchhhcccccCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHH
Q 008636 382 TGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIES 461 (558)
Q Consensus 382 ~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~ 461 (558)
.+.+++.+ +.|||+++|++++.|||++++.+ .+|||+|||+|+++ +|.+++.||+||+||++|++|+|.+||+
T Consensus 363 ~~~~~~~g--~~GEl~v~g~~~~~GY~~~~~~~----~~~~~~TGDl~~~~-~G~l~~~GR~dd~i~~~G~~v~p~eIE~ 435 (525)
T PRK05851 363 GAAGVAGR--EIGEIEIRGASMMSGYLGQAPID----PDDWFPTGDLGYLV-DGGLVVCGRAKELITVAGRNIFPTEIER 435 (525)
T ss_pred CCccCCCC--CeEEEEEecCchhhccccCCccC----CCCceeccceEEEE-CCEEEEEeecCCEEEECCEEeCHHHHHH
Confidence 55667776 78999999999999999998643 37899999999997 7999999999999999999999999999
Q ss_pred HHhcCCCcceeEEEeeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCc--cccCeEEEec--ccCCCCCC
Q 008636 462 VLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRY--MVPKTVVFID--ELPKTATG 537 (558)
Q Consensus 462 ~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~--~~p~~i~~v~--~~P~t~~G 537 (558)
+|.++|+|.+++|++.+++..++.+.+++...... .+.+++.++++++++.+ ++|..+++++ +||+|++|
T Consensus 436 ~l~~~p~V~~~~vv~~~~~~~~~~~~~~v~~~~~~------~~~~~~~~~~~~~l~~~l~~~P~~~~~v~~~~lP~t~~G 509 (525)
T PRK05851 436 VAAQVRGVREGAVVAVGTGEGSARPGLVIAAEFRG------PDEAGARSEVVQRVASECGVVPSDVVFVAPGSLPRTSSG 509 (525)
T ss_pred HHHhCCCcccceEEEEEecCCCCceeEEEEEEecC------cchHHHHHHHHHHHHHHhCCCccEEEEECCCCcCcCcch
Confidence 99999999999999999888787777766543211 24455666677666666 7999999998 89999999
Q ss_pred cchhHHHHHHHhh
Q 008636 538 KVQKYVLGDIANS 550 (558)
Q Consensus 538 K~~r~~l~~~~~~ 550 (558)
|++|++|++.+++
T Consensus 510 Ki~r~~L~~~~~~ 522 (525)
T PRK05851 510 KLRRLAVKRSLEA 522 (525)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998865
No 79
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=2.9e-64 Score=574.24 Aligned_cols=516 Identities=22% Similarity=0.255 Sum_probs=421.1
Q ss_pred CCCCChhhHHHHHhhcCCCCceEEEC-CccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCc
Q 008636 11 SCPLTPLGFIERAATACDDCPSIIYN-DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGA 89 (558)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~~-~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 89 (558)
....++.+.|+++++++|+++|+++. ++.+||+||.++++++|+.|.+ ++++||+|+++++|++++++++|||+++|+
T Consensus 612 ~~~~~l~~~~~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~-~~~~g~~V~i~~~n~~~~~~~~la~~~~G~ 690 (1146)
T PRK08633 612 EALPPLAEAWIDTAKRNWSRLAVADSTGGELSYGKALTGALALARLLKR-ELKDEENVGILLPPSVAGALANLALLLAGK 690 (1146)
T ss_pred CCCCCHHHHHHHHHHhcCCCcEEEcCCCCcCcHHHHHHHHHHHHHHHHH-hCCCCCeEEEECCCchHHHHHHHHHHHcCC
Confidence 44568999999999999999999974 5799999999999999999987 489999999999999999999999999999
Q ss_pred EEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhH
Q 008636 90 IFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTY 169 (558)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (558)
+++|++|..+.+++.++++++++++++++++....+.+..... .......++...+... .. .....+
T Consensus 691 v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---------~~---~~~~~~ 757 (1146)
T PRK08633 691 VPVNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDL-ELPENVKVIYLEDLKA---------KI---SKVDKL 757 (1146)
T ss_pred EEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCch-hcccCceEEEeehhcc---------cc---chhHHH
Confidence 9999999999999999999999999999876554443210000 0001223333322110 00 001122
Q ss_pred HHhhcCCC-CC----CCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhh
Q 008636 170 ENMLAKGD-PQ----FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNG 244 (558)
Q Consensus 170 ~~~~~~~~-~~----~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g 244 (558)
.+...... +. ........++|+++++|||||||.||+|.++|+++..........++..++|++++.+|++|..|
T Consensus 758 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g 837 (1146)
T PRK08633 758 TALLAARLLPARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVFNLRNDDVILSSLPFFHSFG 837 (1146)
T ss_pred HHHHHhccCCHHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhcCCCCCCEEEEcCcHHHHHh
Confidence 22211110 00 00012356789999999999999999999999999888777777778889999999999999999
Q ss_pred hhH-HHHHHHhcceEEEec-CCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc--cccCCCCceEEEEecCCCChhhhHH
Q 008636 245 WSF-TWGAAVVGATNVCLR-KFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRPVRILTAGSPPPAPVLLR 320 (558)
Q Consensus 245 ~~~-~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~--~~~~~~~l~~v~~~g~~l~~~~~~~ 320 (558)
+.. ++.++..|+++++.+ .++++.+++.++++++|++.++|++++.+.+.. ....++++|.+++||+++++++.+.
T Consensus 838 ~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~ 917 (1146)
T PRK08633 838 LTVTLWLPLLEGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKLHPLMFASLRLVVAGAEKLKPEVADA 917 (1146)
T ss_pred HHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhccccCcccCCCeeeEEEcCCcCCHHHHHH
Confidence 854 788899999998876 478999999999999999999999999998754 4556789999999999999999999
Q ss_pred hh-hcCCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEe
Q 008636 321 TE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMR 399 (558)
Q Consensus 321 ~~-~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~ 399 (558)
++ .+++++++.||+||+++++..+......... .........++|.|.++. +++|+|++++++++.+ +.|||+++
T Consensus 918 ~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~-~~~~~~~~~~vG~p~~~~-~v~i~d~~~~~~~~~g--~~Gel~v~ 993 (1146)
T PRK08633 918 FEEKFGIRILEGYGATETSPVASVNLPDVLAADF-KRQTGSKEGSVGMPLPGV-AVRIVDPETFEELPPG--EDGLILIG 993 (1146)
T ss_pred HHHHhCCCeecccccccCcceEEEecCccccccc-ccccCCCCCCccccCCCC-EEEEEcCCCCccCCCC--CceEEEEc
Confidence 88 5699999999999998876644321110000 011112456899999998 9999998889999888 78999999
Q ss_pred cccccccccCCchhhcccccC----CceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCC--cceeE
Q 008636 400 GGSLMLGYLKDPEATSKCMKD----GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPM--VNEAA 473 (558)
Q Consensus 400 ~~~~~~gy~~~~~~~~~~~~~----g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~--v~~~~ 473 (558)
|++++.||+++++.+.+.+.+ |||+|||+|++|+||.+++.||.||+||.+|++|+|.+||+.|.++|+ +.+++
T Consensus 994 g~~~~~gY~~~~~~t~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~~~~~~~~ 1073 (1146)
T PRK08633 994 GPQVMKGYLGDPEKTAEVIKDIDGIGWYVTGDKGHLDEDGFLTITDRYSRFAKIGGEMVPLGAVEEELAKALGGEEVVFA 1073 (1146)
T ss_pred CCCccccccCCccchHHHhhcCCCCCeEECCCEEEEcCCceEEEEecccchhhhCcEEECHHHHHHHHHhccCCCCceEE
Confidence 999999999999988888866 999999999999999999999999999999999999999999999984 66899
Q ss_pred EEeeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHh-cCCCccccCeEEEecccCCCCCCcchhHHHHHHHhhcc
Q 008636 474 VVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRA-RIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSMS 552 (558)
Q Consensus 474 v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~-~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~~~ 552 (558)
|++.+++..|+.++++++.. . .+.+++++.+.+ .++++++|..+++++++|+|++||++|++|+++.++..
T Consensus 1074 v~~~~~~~~g~~~~~~v~~~---~-----~~~~~l~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKi~r~~L~~~~~~~~ 1145 (1146)
T PRK08633 1074 VTAVPDEKKGEKLVVLHTCG---A-----EDVEELKRAIKESGLPNLWKPSRYFKVEALPLLGSGKLDLKGLKELALALL 1145 (1146)
T ss_pred EEeccCCCCCcEEEEEEecC---c-----cCHHHHHHHHHhcCCCcccCCcEEEEecCcCCCCCCCCcHHHHHHHHHHhc
Confidence 99999999999999888762 1 466788888874 69999999999999999999999999999999987654
No 80
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=2.5e-64 Score=580.21 Aligned_cols=490 Identities=20% Similarity=0.220 Sum_probs=410.9
Q ss_pred CCCCCChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCc
Q 008636 10 NSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGA 89 (558)
Q Consensus 10 ~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 89 (558)
+.+..++.++|+++++++|+++|+++.++.+||+||.+++.++|+.|.+.|+++|++|++++++++++++++|||+++|+
T Consensus 454 ~~~~~~l~~~~~~~~~~~p~~~Al~~~~~~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l~~~~~~~~i~~~la~~~~G~ 533 (1296)
T PRK10252 454 EIPETTLSALVAQQAAKTPDAPALADARYQFSYREMREQVVALANLLRERGVKPGDSVAVALPRSVFLTLALHAIVEAGA 533 (1296)
T ss_pred CCCcCCHHHHHHHHHHhCCCCeEEEcCCCcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCC
Confidence 34457899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhH
Q 008636 90 IFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTY 169 (558)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (558)
+++|++|..+.+++..+++.++++++|++.+....+.+. . ...+......
T Consensus 534 ~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~~----~----~~~~~~~~~~---------------------- 583 (1296)
T PRK10252 534 AWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFADV----P----DLTSLCYNAP---------------------- 583 (1296)
T ss_pred EEEecCccCHHHHHHHHHHhCCCCEEEECcchhhhcccC----C----Cceeeecccc----------------------
Confidence 999999999999999999999999999987654333211 0 0001110000
Q ss_pred HHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhhhHHH
Q 008636 170 ENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTW 249 (558)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~ 249 (558)
.... .........++++++|+|||||||.||||.++|+++.....+....+++.+++++++..|++|..++..++
T Consensus 584 ---~~~~--~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~ 658 (1296)
T PRK10252 584 ---LAPQ--GAAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTADDVVLQKTPCSFDVSVWEFF 658 (1296)
T ss_pred ---cccc--cCCCCCCCCCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEeCCcchhhhHHHHH
Confidence 0000 00011123567999999999999999999999999998888888888999999999999999999988899
Q ss_pred HHHHhcceEEEecC---CCHHHHHHHHHHhCCcEEEehHHHHHHHhcCccc----cCCCCceEEEEecCCCChhhhHHhh
Q 008636 250 GAAVVGATNVCLRK---FDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA----KQLDRPVRILTAGSPPPAPVLLRTE 322 (558)
Q Consensus 250 ~~l~~g~~~~~~~~---~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~----~~~~~l~~v~~~g~~l~~~~~~~~~ 322 (558)
.+++.|+++++.+. .++..+++.++++++|++.++|+++..+++.... ..++++|.+++||+++++++.+.+.
T Consensus 659 ~~l~~G~~l~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~ 738 (1296)
T PRK10252 659 WPFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQSCASLRQVFCSGEALPADLCREWQ 738 (1296)
T ss_pred HHHhCCCEEEECChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhccccccccCCCccEEEEecCCCCHHHHHHHH
Confidence 99999999999763 5899999999999999999999999998876422 2457899999999999999999988
Q ss_pred h-cCCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecc
Q 008636 323 S-LGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGG 401 (558)
Q Consensus 323 ~-~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~ 401 (558)
+ +++++++.||+||++..+.......... ........++|.|.++. .++|+|+ ++++++.| ..|||+|+|+
T Consensus 739 ~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~----~~~~~~~~~iG~p~~~~-~~~i~d~-~~~~~~~g--~~Gel~i~g~ 810 (1296)
T PRK10252 739 QLTGAPLHNLYGPTEAAVDVSWYPAFGEEL----AAVRGSSVPIGYPVWNT-GLRILDA-RMRPVPPG--VAGDLYLTGI 810 (1296)
T ss_pred hcCCCEEEeCCCcchhhheeeeeecccccc----cccCCCCCCcccccCCC-EEEEECC-CCCCCCCC--CceEEEeccc
Confidence 5 4899999999999987665443221100 00012235789999998 9999997 78889888 7899999999
Q ss_pred cccccccCCchhhccccc-------CCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEE
Q 008636 402 SLMLGYLKDPEATSKCMK-------DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAV 474 (558)
Q Consensus 402 ~~~~gy~~~~~~~~~~~~-------~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v 474 (558)
+++.||+++++.+...|. ++||+|||+|++++||.+++.||+|++||++|++|++.+||+.|.++|+|.+++|
T Consensus 811 ~~~~GY~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~~G~l~~~GR~d~~ik~~G~ri~~~eIE~~l~~~~~v~~a~v 890 (1296)
T PRK10252 811 QLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLDDGAVEYLGRSDDQLKIRGQRIELGEIDRAMQALPDVEQAVT 890 (1296)
T ss_pred ccchhhCCCcccchhhcccCCCCCCCEEEecCceEEEcCCCcEEEecccCCeEEEeeEEecHHHHHHHHHhCccccceEE
Confidence 999999999999988872 3499999999999999999999999999999999999999999999999999987
Q ss_pred Eeee----CCCCC--ceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHH
Q 008636 475 VGRP----DPFWQ--EIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDI 547 (558)
Q Consensus 475 ~~~~----~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~ 547 (558)
+... +...| ..++++++...+.. .+.++++++++++||.|++|..++.+++||+|++||++|++|++.
T Consensus 891 ~~~~~~~~~~~~~~~~~lva~v~~~~~~~-----~~~~~l~~~l~~~Lp~~~~P~~~~~~~~lP~t~~GKidr~~L~~~ 964 (1296)
T PRK10252 891 HACVINQAAATGGDARQLVGYLVSQSGLP-----LDTSALQAQLRERLPPHMVPVVLLQLDQLPLSANGKLDRKALPLP 964 (1296)
T ss_pred EEEeccccccCCCCccEEEEEEEcCCCCC-----CCHHHHHHHHHhhCchhcCCcEEEEecCCCCCCCcChhHHhcCCC
Confidence 7542 11112 36889988766543 578899999999999999999999999999999999999999764
No 81
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=2.5e-63 Score=523.59 Aligned_cols=510 Identities=24% Similarity=0.287 Sum_probs=409.0
Q ss_pred CChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHH-hCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEE
Q 008636 14 LTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLS-SFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFN 92 (558)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~-~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (558)
.++.++|++++..+|+++|+++.++.+||+||.+++.++|..|. +.|+++||+|+++++|++++++++|||+++|++++
T Consensus 25 ~~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 104 (560)
T PRK08751 25 RTVAEVFATSVAKFADRPAYHSFGKTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYPIATFGVLRAGLTVV 104 (560)
T ss_pred CcHHHHHHHHHHhCCCCceEEECCceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEEe
Confidence 58999999999999999999999999999999999999999997 68999999999999999999999999999999999
Q ss_pred eccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccc--cCC----------CCCCCCC
Q 008636 93 TINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEI--SSS----------SSPPPRI 160 (558)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----------~~~~~~~ 160 (558)
+++|.++.+++..++++++++++++++.....+.+...... ...++........ ... .......
T Consensus 105 ~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (560)
T PRK08751 105 NVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIADTP----VKQVITTGLGDMLGFPKAALVNFVVKYVKKLVPEY 180 (560)
T ss_pred ccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHHhhCCC----ccEEEEechhhhcccccchhhhhhhhhhhcccccc
Confidence 99999999999999999999999998877666555433221 1222221100000 000 0000000
Q ss_pred CCCCchhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccc----cCC-CCEEEE
Q 008636 161 PPADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWV----VPK-QSVLLW 235 (558)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~----~~~-~~~~~~ 235 (558)
.......+.+.................+++++++|||||||.||+|.++|.++..........+. +.. .+++++
T Consensus 181 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (560)
T PRK08751 181 -RINGAIRFREALALGRKHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTGKLEEGCEVVIT 259 (560)
T ss_pred -CCCccccHHHHHhccCCCCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhccccccCCCCceEEE
Confidence 00011233333332222111223356789999999999999999999999999776655443332 233 356778
Q ss_pred ecCchhhhhhh-HHHHHHHhcceEEEec-CCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc--cccCCCCceEEEEecC
Q 008636 236 TLPMFHNNGWS-FTWGAAVVGATNVCLR-KFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRPVRILTAGS 311 (558)
Q Consensus 236 ~~p~~~~~g~~-~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~--~~~~~~~l~~v~~~g~ 311 (558)
..|++|..++. ..+.++..|++.++.. ..++..+++.++++++|++.++|.++..+.+.. ....++++|.+++||+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~v~~gG~ 339 (560)
T PRK08751 260 ALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLNTPGFDQIDFSSLKMTLGGGM 339 (560)
T ss_pred ecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHHHcCcCcCCcchhhheeeeeCCC
Confidence 89999998874 3455666777766654 578999999999999999999999999998765 2334678999999999
Q ss_pred CCChhhhHHhhh-cCCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCC
Q 008636 312 PPPAPVLLRTES-LGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDG 390 (558)
Q Consensus 312 ~l~~~~~~~~~~-~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~ 390 (558)
+++..+...+++ +++.+++.||+||+++.+..+.... ....+++|.+.++. .++++|+ ++..++.+
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~----------~~~~~~vG~~~~~~-~v~i~d~-~~~~~~~g- 406 (560)
T PRK08751 340 AVQRSVAERWKQVTGLTLVEAYGLTETSPAACINPLTL----------KEYNGSIGLPIPST-DACIKDD-AGTVLAIG- 406 (560)
T ss_pred CCCHHHHHHHHHHhCCeEEEeeccccCCCceecccccc----------cccCCCcCccCCCc-eEEEECC-CCCCCCCC-
Confidence 999999999884 5899999999999987765543111 12235789999988 9999996 77888877
Q ss_pred CeeeEEEEecccccccccCCchhhcccc-cCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCc
Q 008636 391 QTRGEIVMRGGSLMLGYLKDPEATSKCM-KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMV 469 (558)
Q Consensus 391 ~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v 469 (558)
+.|||+++|+.++.||+++++.+...| .+|||+|||+|+++++|.+++.||.+|+|+.+|.+|+|.+||+.|.++++|
T Consensus 407 -~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~p~eiE~~l~~~~~v 485 (560)
T PRK08751 407 -EIGELCIKGPQVMKGYWKRPEETAKVMDADGWLHTGDIARMDEQGFVYIVDRKKDMILVSGFNVYPNEIEDVIAMMPGV 485 (560)
T ss_pred -CceEEEEecCccchhhcCChhhhhhccccCCCccccceEEEcCCceEEEEeechhheeECCEEEcHHHHHHHHHhCcCe
Confidence 789999999999999999999888777 479999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEeeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHH
Q 008636 470 NEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIA 548 (558)
Q Consensus 470 ~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~ 548 (558)
.+++|++.+++..|+.++++++.... . .+.+++++++.++++++++|..++++++||+|++||++|+.|++..
T Consensus 486 ~~~~v~~~~~~~~ge~~~~~v~~~~~-~-----~~~~~l~~~~~~~l~~~~~P~~v~~v~~lP~t~~gKv~r~~L~~~~ 558 (560)
T PRK08751 486 LEVAAVGVPDEKSGEIVKVVIVKKDP-A-----LTAEDVKAHARANLTGYKQPRIIEFRKELPKTNVGKILRRELRDAA 558 (560)
T ss_pred eeeEEEecCCCCCCceEEEEEEcCCC-C-----CCHHHHHHHHHHhhhhccCCeEEEEhhhCCCCccccccHHHHHHhh
Confidence 99999999988888888887765432 2 5778999999999999999999999999999999999999999874
No 82
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=8.9e-64 Score=520.73 Aligned_cols=489 Identities=21% Similarity=0.260 Sum_probs=406.1
Q ss_pred ChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEec
Q 008636 15 TPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTI 94 (558)
Q Consensus 15 tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 94 (558)
++.+.|.+.+..+|+++|+.+.++.+||+||.+++.++|..|.+.|+++|++|+++++|+.++++++|||+++|++++++
T Consensus 1 ~~~~~l~~~a~~~p~~~a~~~~~~~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v~~ 80 (502)
T TIGR01734 1 KLIEAIQAFAETYPQTIAYRYQGQELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHMLVAFLGSIKSGHAYIPV 80 (502)
T ss_pred CHHHHHHHHHHHCCCceEEEcCCcEEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCEEeCC
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhHHHhhc
Q 008636 95 NTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLA 174 (558)
Q Consensus 95 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (558)
++.++.+.+..+++..++++++++.+...... ...++.+.. ...+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~-----------~~~~~~~~~----------------------~~~~~~ 127 (502)
T TIGR01734 81 DTSIPSERIEMIIEAAGPELVIHTAELSIDAV-----------GTQIITLSA----------------------LEQAET 127 (502)
T ss_pred CCcChHHHHHHHHHhcCCCEEEeccccccccc-----------CCceEEchH----------------------hhhhhh
Confidence 99999999999999999999999875432111 011111110 011111
Q ss_pred CCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhhhHHHHHHHh
Q 008636 175 KGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVV 254 (558)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~ 254 (558)
...+ ........+++.++++|||||||.||+|.++|+++.....+....++...+++++...|++|..++..++.++..
T Consensus 128 ~~~~-~~~~~~~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~ 206 (502)
T TIGR01734 128 SGGP-VSFDHAVKGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLADFPLSEGKQFLNQAPFSFDLSVMDLYPCLAS 206 (502)
T ss_pred hcCC-ccccccCCCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHHHhCCCCCCceEEeecCceechhHHHHHHHHHC
Confidence 1111 111123457799999999999999999999999998888777777888899999999999999999889999999
Q ss_pred cceEEEecC---CCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc--cccCCCCceEEEEecCCCChhhhHHhhh-c-CCe
Q 008636 255 GATNVCLRK---FDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRPVRILTAGSPPPAPVLLRTES-L-GFI 327 (558)
Q Consensus 255 g~~~~~~~~---~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~--~~~~~~~l~~v~~~g~~l~~~~~~~~~~-~-~~~ 327 (558)
|+++++.+. .++..+++.++++++|.+.++|.+++.++... ....+++++.++++|++++....+.+.+ + ++.
T Consensus 207 G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~ 286 (502)
T TIGR01734 207 GGTLHCLDKDITNNFKLLFEELPKTGLNVWVSTPSFVDMCLLDPNFNQENYPHLTHFLFCGEELPVKTAKALLERFPKAT 286 (502)
T ss_pred CCEEEEcCHHHhcCHHHHHHHHHHcCCeEEEEChhHHHHHHhccccccccCCcccEEEEcCCcCCHHHHHHHHHHCCCcE
Confidence 999998874 57899999999999999999999998876543 4456789999999999999999999884 4 889
Q ss_pred eeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecccccccc
Q 008636 328 VSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGY 407 (558)
Q Consensus 328 v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy 407 (558)
+++.||+||+++.......... ........++|.+.+++ +++|+|+ ++..++++ +.|||+++|+.++.||
T Consensus 287 ~~~~yG~tE~~~~~~~~~~~~~------~~~~~~~~~vg~~~~~~-~~~i~~~-~~~~~~~g--~~Gel~v~g~~~~~gy 356 (502)
T TIGR01734 287 IYNTYGPTEATVAVTSVKITQE------ILDQYPRLPIGFAKPDM-NLFIMDE-EGEPLPEG--EKGEIVIVGPSVSKGY 356 (502)
T ss_pred EEeCccCCcceEEEEEEEcccc------ccccCCccccccccCCC-EEEEECC-CCCCCCCC--CeeEEEEccccccccc
Confidence 9999999998754433221111 01112234689999998 9999998 57888877 7899999999999999
Q ss_pred cCCchhhccccc----CCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeee-CCCC
Q 008636 408 LKDPEATSKCMK----DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP-DPFW 482 (558)
Q Consensus 408 ~~~~~~~~~~~~----~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~-~~~~ 482 (558)
+++++.+...|. .+||+|||+|+++++ .+++.||.+|+|+.+|++|+|.+||+.+.++|+|.++++++.. ....
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~~TGDlg~~~~~-~l~i~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~ 435 (502)
T TIGR01734 357 LNNPEKTAEAFFSHEGQPAYRTGDAGTITDG-QLFYQGRLDFQIKLHGYRIELEDIEFNLRQSSYIESAVVVPKYNKDHK 435 (502)
T ss_pred cCCcccchHhheeCCCcEEEECCCEEEEECC-EEEEeccccCeEEECcEEeCHHHHHHHHHcCCCccEEEEEEEEcCCCC
Confidence 999988877652 359999999999976 9999999999999999999999999999999999999999965 4455
Q ss_pred CceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHh
Q 008636 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIAN 549 (558)
Q Consensus 483 ~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~ 549 (558)
++.++++++........ .....+++++.++++++++.+|+.++++++||+|++||++|++|++++.
T Consensus 436 ~~~~~~~v~~~~~~~~~-~~~~~~~i~~~~~~~l~~~~~P~~~~~v~~lP~t~~gKv~r~~l~~~~~ 501 (502)
T TIGR01734 436 VEYLIAAIVPETEDFEK-EFQLTKAIKKELKKSLPAYMIPRKFIYRDQLPLTANGKIDRKALAEEVN 501 (502)
T ss_pred ceEEEEEEEeccccccc-chhhHHHHHHHHhhhChhhcCCcEEEEccccCCCCCCcccHHHHHHhhc
Confidence 67888888876543211 0122378899999999999999999999999999999999999999875
No 83
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=4.4e-64 Score=533.44 Aligned_cols=520 Identities=23% Similarity=0.281 Sum_probs=394.5
Q ss_pred CCCChhhHHHHHhhcCCCCceEEEC----C-----ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHH
Q 008636 12 CPLTPLGFIERAATACDDCPSIIYN----D-----TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHF 82 (558)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~----~-----~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~l 82 (558)
...|+.++|++.++++|+++|+.+. + .++||+|+.+++.++|.+|.+.|+++||+|+|+++|+++|++++|
T Consensus 40 ~~~t~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~~~~l 119 (660)
T PLN02430 40 DITTAWDIFSKSVEKYPDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQWIVAME 119 (660)
T ss_pred CCCCHHHHHHHHHHhCCCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHH
Confidence 4568999999999999999999752 1 247999999999999999999999999999999999999999999
Q ss_pred HHhhcCcEEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCC
Q 008636 83 AVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPP 162 (558)
Q Consensus 83 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (558)
||+++|++++|+++.++.+++.++++.++++++|+++......... ..........++.+............ ..
T Consensus 120 A~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~--~~~~~~~l~~ii~~~~~~~~~~~~~~----~~ 193 (660)
T PLN02430 120 ACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELLEP--DCKSAKRLKAIVSFTSVTEEESDKAS----QI 193 (660)
T ss_pred HHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHHhh--hcccCCCceEEEEECCCChHHhhhhh----cC
Confidence 9999999999999999999999999999999999976532222111 11111123445554321110000000 00
Q ss_pred CCchhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhccc---c--cccCCCCEEEEec
Q 008636 163 ADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLI---D--WVVPKQSVLLWTL 237 (558)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~---~--~~~~~~~~~~~~~ 237 (558)
......|.++...+........+..++++++|+|||||||.||||.+||+++......... . ..++.+|++++.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~~d~~ls~l 273 (660)
T PLN02430 194 GVKTYSWIDFLHMGKENPSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTHDDVYLSFL 273 (660)
T ss_pred CcEEEEHHHHHHhhccCCCCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCCCCEEEEeC
Confidence 0012356665544332222222346789999999999999999999999999776554322 1 2467889999999
Q ss_pred CchhhhhhhHHHHHHHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCcc---------------------
Q 008636 238 PMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE--------------------- 296 (558)
Q Consensus 238 p~~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~--------------------- 296 (558)
|++|..+....+.++..|+++++... ++..+++.+.+++||++.++|.+++.+.+...
T Consensus 274 Pl~H~~~~~~~~~~l~~G~~i~~~~~-~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~ 352 (660)
T PLN02430 274 PLAHILDRMIEEYFFRKGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQELNPRRRLIFNALYKYK 352 (660)
T ss_pred cHHHHHHHHHHHHHHHcCCEEEEeCC-ChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 99999998766677888999887654 78889999999999999999999988764210
Q ss_pred ------------cc--------------CCCCceEEEEecCCCChhhhHHhhhcC-CeeeecccCCCCCCcccccCCCCC
Q 008636 297 ------------AK--------------QLDRPVRILTAGSPPPAPVLLRTESLG-FIVSHGYGKTEIAGVNVSCAWKPK 349 (558)
Q Consensus 297 ------------~~--------------~~~~l~~v~~~g~~l~~~~~~~~~~~~-~~v~~~YG~tE~g~~~~~~~~~~~ 349 (558)
.. ..+++|.+++||+++++++.+.++.++ +.+++.||+||+++.++.....
T Consensus 353 ~~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~-- 430 (660)
T PLN02430 353 LAWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLRVTSCAFVVQGYGLTETLGPTTLGFPD-- 430 (660)
T ss_pred HHHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHHHhcCCCeeeecchhhhhhceEeeccc--
Confidence 00 015799999999999999877777664 6899999999998766543211
Q ss_pred CCCCChhhhhhhcccCCceecccceeeEeCC-CCC-cccCCCCCeeeEEEEecccccccccCCchhhcccccCCceeeCc
Q 008636 350 WNKLPARERASLKARQGVRTIGLTEVDIVDP-ETG-LSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGD 427 (558)
Q Consensus 350 ~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~-~~~-~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD 427 (558)
.....+++|.|.+++ ++++.|. +.+ .++..+ ..|||+|+|++++.|||++|+.+...|.+|||+|||
T Consensus 431 --------~~~~~gsvG~p~~~~-evki~d~~~~g~~~~~~~--~~GEi~vrg~~v~~GY~~~~e~t~~~~~dGw~~TGD 499 (660)
T PLN02430 431 --------EMCMLGTVGAPAVYN-ELRLEEVPEMGYDPLGEP--PRGEICVRGKCLFSGYYKNPELTEEVMKDGWFHTGD 499 (660)
T ss_pred --------cCCCCCCccCCCCce-EEEEEEcCCcCcccCCCC--CcceEEecCCCccccccCChHHhhhhhhccceeccc
Confidence 112346899999998 9999863 222 233332 579999999999999999999999999999999999
Q ss_pred eeEEccCCcEEEecccCCeee-eCceeechHHHHHHHhcCCCcceeEEEeeeCCCCCceeEEEEEecCCCC-----CCCC
Q 008636 428 VGMMHPDGYLEIKDRSKDVII-SGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTD-----SGGM 501 (558)
Q Consensus 428 ~~~~~~~g~l~~~GR~~d~i~-~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~-----~~~~ 501 (558)
+|++|+||.+++.||++|+|| .+|++|+|.+||+.|.++|.|.+++|++.. .++.++++|++.+... ..+.
T Consensus 500 ig~~d~dG~l~i~gR~kd~ik~~~G~~V~p~~IE~~l~~~p~V~~~~V~G~~---~~~~~~A~vv~~~~~~~~~~~~~~~ 576 (660)
T PLN02430 500 IGEILPNGVLKIIDRKKNLIKLSQGEYVALEYLENVYGQNPIVEDIWVYGDS---FKSMLVAVVVPNEENTNKWAKDNGF 576 (660)
T ss_pred eEEECCCCcEEEEEcccccEEcCCCcEEchHHHHHHHhcCCCeeEEEEEecC---CcceEEEEEEcCHHHHHHHHHhCCC
Confidence 999999999999999999999 579999999999999999999999999843 3567899998764320 0000
Q ss_pred ------CCC----HHHHHHHH-----HhcCCCccccCeEEEecc-c-----CCCCCCcchhHHHHHHHhhcccc
Q 008636 502 ------MTT----EKDIIQYC-----RARIPRYMVPKTVVFIDE-L-----PKTATGKVQKYVLGDIANSMSMS 554 (558)
Q Consensus 502 ------~~~----~~~l~~~~-----~~~l~~~~~p~~i~~v~~-~-----P~t~~GK~~r~~l~~~~~~~~~~ 554 (558)
... .+.+.+.+ ++.|+.+.+++.|+++++ | .+|+++|+.|..+.+.|++.+..
T Consensus 577 ~~~~~~~~~~~~~~~~i~~~i~~~~~~~~l~~~e~i~~~~l~~~~~~~~~g~lT~t~K~~R~~i~~~y~~~i~~ 650 (660)
T PLN02430 577 TGSFEELCSLPELKEHILSELKSTAEKNKLRGFEYIKGVILETKPFDVERDLVTATLKKRRNNLLKYYQVEIDE 650 (660)
T ss_pred CCCHHHHhcCHHHHHHHHHHHHHHHHHhCCCCceeeeEEEEECCCCCCcCCcCChhhhhhhHHHHHHHHHHHHH
Confidence 001 11222222 235999999999998753 2 48999999999999999887654
No 84
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=6.3e-64 Score=531.62 Aligned_cols=504 Identities=22% Similarity=0.277 Sum_probs=394.2
Q ss_pred CCCChhhHHHHHhhcCCCCceEEECC---------ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHH
Q 008636 12 CPLTPLGFIERAATACDDCPSIIYND---------TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHF 82 (558)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~~---------~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~l 82 (558)
..+|+.++++++++++|+++|+++.+ +.+||+||.+++.++|++|.+. +++||+|+++++|++++++++|
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~V~l~~~n~~e~~~~~l 110 (612)
T PRK12476 32 PGTTLISLIERNIANVGDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQV-AGPGDRVAILAPQGIDYVAGFF 110 (612)
T ss_pred ccCcHHHHHHHHHHhCCCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHHh-cCCCCEEEEECCCChhHHHHHH
Confidence 45799999999999999999998731 4899999999999999999986 9999999999999999999999
Q ss_pred HHhhcCcEEEec-cccCC--hHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCC
Q 008636 83 AVPMSGAIFNTI-NTRLD--ARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPR 159 (558)
Q Consensus 83 A~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (558)
||+++|++++|+ ++..+ .+++.++++.++++++|++++....+.+........ ....++.++....
T Consensus 111 A~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~---------- 179 (612)
T PRK12476 111 AAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPRL-RRPRVIAIDAIPD---------- 179 (612)
T ss_pred HHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhcccc-cCceEEEeccccc----------
Confidence 999999999999 57766 789999999999999999887665554443322110 0123333321100
Q ss_pred CCCCCchhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccc-cCCCCEEEEecC
Q 008636 160 IPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWV-VPKQSVLLWTLP 238 (558)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~p 238 (558)
....... .....++++++|+|||||||.||||.++|+++..........+. +.+++++++.+|
T Consensus 180 ---------------~~~~~~~-~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~P 243 (612)
T PRK12476 180 ---------------SAGESFV-PVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSIDLLDRNTHGVSWLP 243 (612)
T ss_pred ---------------ccccccc-CCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHhccCCCCceEEEeCC
Confidence 0000000 11245689999999999999999999999999776655555566 678899999999
Q ss_pred chhhhhhhHHHHHHHhcceEEEecC--C--CHHHHHHHHH--HhCCcEEEehHHHHHHHhcCc------cccCCCCceEE
Q 008636 239 MFHNNGWSFTWGAAVVGATNVCLRK--F--DAPTVFALIR--KHGVTHMCGAPIVLNLLSSSP------EAKQLDRPVRI 306 (558)
Q Consensus 239 ~~~~~g~~~~~~~l~~g~~~~~~~~--~--~~~~~~~~i~--~~~~t~l~~~p~~l~~l~~~~------~~~~~~~l~~v 306 (558)
++|..|+...+.+++.|++++++.+ + ++..+++.++ +++++.+..+|.++..++... ....+++++ +
T Consensus 244 l~h~~g~~~~~~~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~lr-~ 322 (612)
T PRK12476 244 LYHDMGLSMIGFPAVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPAEGDDIDLSNVV-L 322 (612)
T ss_pred cccccchHHHHHHHhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChhhhcCcchhHhe-E
Confidence 9999999776677667777776653 2 7899999995 589999999999888776531 123567889 9
Q ss_pred EEecCCCChhhhHHhhh-c---CC---eeeecccCCCCCCcccccCCCCCCC--CCCh--------------hhhhhhcc
Q 008636 307 LTAGSPPPAPVLLRTES-L---GF---IVSHGYGKTEIAGVNVSCAWKPKWN--KLPA--------------RERASLKA 363 (558)
Q Consensus 307 ~~~g~~l~~~~~~~~~~-~---~~---~v~~~YG~tE~g~~~~~~~~~~~~~--~~~~--------------~~~~~~~~ 363 (558)
++||+++++++.+.+.+ + |+ .+++.||+||++..+.......... .... ........
T Consensus 323 ~~gg~~~~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 402 (612)
T PRK12476 323 IIGSEPVSIDAVTTFNKAFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVAHV 402 (612)
T ss_pred EecccCCCHHHHHHHHHHHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCCcceeE
Confidence 99999999999998874 3 43 4899999999876543322110000 0000 00001234
Q ss_pred cCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecccccccccCCchhhccccc-------------------CCcee
Q 008636 364 RQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK-------------------DGRYY 424 (558)
Q Consensus 364 ~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-------------------~g~~~ 424 (558)
++|.+.++. +++|+|++++.+++.+ +.|||+++|++++.|||++++.+...|. ++||+
T Consensus 403 ~~G~~~~g~-~v~ivd~~~g~~~~~g--~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~ 479 (612)
T PRK12476 403 SCGQVARSQ-WAVIVDPDTGAELPDG--EVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLR 479 (612)
T ss_pred eCCCcCCCC-EEEEEeCCCCcCCCCC--CEEEEEEcCCcccccccCChHHHHHHHhhhhccccccccccccccCCCCeee
Confidence 789999998 9999998668889888 8899999999999999999998877763 25999
Q ss_pred eCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhc-CCCcce--eEEEeeeCCCCCceeEEEEEecCCCCCCCC
Q 008636 425 TGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYS-HPMVNE--AAVVGRPDPFWQEIPCAFVSLKTGTDSGGM 501 (558)
Q Consensus 425 TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~-~~~v~~--~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~ 501 (558)
|||+|+++ ||+|++.||++|+||++|++|+|.+||+.|.+ +|.|.+ +++++++++. ++.+++++++.++...
T Consensus 480 TGDlg~~~-dG~l~i~GR~~d~I~~~G~~I~p~eIE~~l~~~~p~V~~~~v~v~~~~~~~-~~~~~~~v~~~~~~~~--- 554 (612)
T PRK12476 480 TGDLGVYL-DGELYITGRIADLIVIDGRNHYPQDIEATVAEASPMVRRGYVTAFTVPAED-NERLVIVAERAAGTSR--- 554 (612)
T ss_pred ccccceeE-CCEEEEEeccCcEEEECCcccCHHHHHHHHHHhcccccCCcEEEEEecCCC-cceEEEEEEecCCccc---
Confidence 99999985 99999999999999999999999999999985 899999 6778888876 7889999888765321
Q ss_pred CCCHHHHHHHHHhcCC-Cccc-cCeEEEec--ccCCCCCCcchhHHHHHHHhhccc
Q 008636 502 MTTEKDIIQYCRARIP-RYMV-PKTVVFID--ELPKTATGKVQKYVLGDIANSMSM 553 (558)
Q Consensus 502 ~~~~~~l~~~~~~~l~-~~~~-p~~i~~v~--~~P~t~~GK~~r~~l~~~~~~~~~ 553 (558)
.+.+++.+++++.+. .+++ |..+++++ +||+|++||++|++|++.+.+...
T Consensus 555 -~~~~~l~~~~~~~l~~~~~~~p~~v~~v~~~~lP~t~~GKi~r~~L~~~~~~~~~ 609 (612)
T PRK12476 555 -ADPAPAIDAIRAAVSRRHGLAVADVRLVPAGAIPRTTSGKLARRACRAQYLDGRL 609 (612)
T ss_pred -ccHHHHHHHHHHHHHHhhCCcceEEEEECCCCcCcCCchHHHHHHHHHHHHcCCC
Confidence 356778888888776 4776 67888886 699999999999999999877653
No 85
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=4.4e-63 Score=515.64 Aligned_cols=495 Identities=24% Similarity=0.311 Sum_probs=412.0
Q ss_pred hhHHHHH-hhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEecc
Q 008636 17 LGFIERA-ATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTIN 95 (558)
Q Consensus 17 ~~~l~~~-a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~ 95 (558)
.++++++ ++.+|+++|+++.+..+||.||.++++++|++|.+.|+++|++|+++++|+++++++++||+++|+++++++
T Consensus 7 ~~~~~~~~~~~~p~~~a~~~~~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~~~~~~a~~~~G~~~v~l~ 86 (508)
T TIGR02262 7 EDLLDRNVVEGRGGKTAFIDDISSLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDFPIAFLGAIRAGIVPVALN 86 (508)
T ss_pred HHHHHHHHhcccCCceEEEeCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEeecc
Confidence 4556665 677999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhHHHhhcC
Q 008636 96 TRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAK 175 (558)
Q Consensus 96 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (558)
+..+.+.+.++++.++++++|++.+....+.+.....+ ....++....... ....+.++...
T Consensus 87 ~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---------------~~~~~~~~~~~ 148 (508)
T TIGR02262 87 TLLTADDYAYMLEDSRARVVFVSGELLPVIKAALGKSP---HLEHRVVVGRPEA---------------GEVQLAELLAT 148 (508)
T ss_pred CCCCHHHHHHHHHhcCCeEEEEchhhHHHHHHHHhcCC---CccEEEEeCCCCc---------------ccccHHHHhhc
Confidence 99999999999999999999999887766665544332 1233333322110 01223333322
Q ss_pred CCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHh-cccccccCCCCEEEEecCchhhhhh-hHHHHHHH
Q 008636 176 GDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVD-SLIDWVVPKQSVLLWTLPMFHNNGW-SFTWGAAV 253 (558)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~g~-~~~~~~l~ 253 (558)
..... ......++++++++|||||||.||+|.++|+++...... ....++++.+++++...|++|..++ ..++.++.
T Consensus 149 ~~~~~-~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~ 227 (508)
T TIGR02262 149 ESEQF-KPAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTLGIREDDVVFSAAKLFFAYGLGNALTFPMS 227 (508)
T ss_pred CCCcc-CCCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHH
Confidence 22211 112345789999999999999999999999999766554 3445678899999999999999888 45667788
Q ss_pred hcceEEEecC-CCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc--cccCCCCceEEEEecCCCChhhhHHhh-hcCCeee
Q 008636 254 VGATNVCLRK-FDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRPVRILTAGSPPPAPVLLRTE-SLGFIVS 329 (558)
Q Consensus 254 ~g~~~~~~~~-~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~--~~~~~~~l~~v~~~g~~l~~~~~~~~~-~~~~~v~ 329 (558)
.|+++++.+. +++..+++.++++++|++.++|.++..+.... ......+++.++++|+++++.+.+.+. .++++++
T Consensus 228 ~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~v~ 307 (508)
T TIGR02262 228 VGATTVLMGERPTPDAVFDRLRRHQPTIFYGVPTLYAAMLADPNLPAEDQVRLRLCTSAGEALPAEVGQRWQARFGVDIV 307 (508)
T ss_pred cCceEEEeCCCCCHHHHHHHHHHHCCcEEecchHHHHHHhcCccccccccccceeEEEcCCCCCHHHHHHHHHHhCCchh
Confidence 9999888764 68999999999999999999999998887654 223456899999999999999999988 4689999
Q ss_pred ecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecccccccccC
Q 008636 330 HGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLK 409 (558)
Q Consensus 330 ~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~ 409 (558)
+.||+||+++++..+... .....++|.|.++. .++|+|+ ++.+++++ +.|||+++|++++.||++
T Consensus 308 ~~YG~tE~~~~~~~~~~~-----------~~~~~~~G~~~~g~-~v~i~d~-~~~~~~~g--~~Gel~i~~~~~~~gY~~ 372 (508)
T TIGR02262 308 DGIGSTEMLHIFLSNLPG-----------DVRYGTSGKPVPGY-RLRLVGD-GGQDVAAG--EPGELLISGPSSATMYWN 372 (508)
T ss_pred hCccccccCceeecCCcc-----------CCCCCCcCCCCCCc-EEEEECC-CCCCCCCC--CeeEEEEecCccccccCC
Confidence 999999999766543211 11235788899987 9999995 78888887 789999999999999999
Q ss_pred CchhhcccccCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCCCCCceeEEE
Q 008636 410 DPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAF 489 (558)
Q Consensus 410 ~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~ 489 (558)
+++.+...|.++||+|||+++++++|.+++.||++|+|+.+|.+++|.+||+.|.++++|.++++++.++...++.++++
T Consensus 373 ~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~gR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~~ 452 (508)
T TIGR02262 373 NRAKTRDTFQGEWTRSGDKYVRNDDGSYTYAGRTDDMLKVSGIYVSPFEIESALIQHPAVLEAAVVGVEDEDGLIKPKAF 452 (508)
T ss_pred CHHHhHhhhhcCceeccceEEEcCCccEEEeccccceeeeCCEEECHHHHHHHHHhCCCeeEEEEEeccccCCCceeEEE
Confidence 99999888889999999999999999999999999999999999999999999999999999999998887777888888
Q ss_pred EEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHH
Q 008636 490 VSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDI 547 (558)
Q Consensus 490 v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~ 547 (558)
+++.++.... ....+++.+.++++|++++.|..+++++++|+|++||++|+.|+++
T Consensus 453 v~~~~~~~~~--~~~~~~i~~~~~~~l~~~~~p~~i~~~~~iP~t~~gKi~r~~l~~~ 508 (508)
T TIGR02262 453 IVLRPGQDID--TALETELKEHVKDRLAPYKYPRWIVFVDDLPKTATGKIQRFKLREG 508 (508)
T ss_pred EEeCCCCccc--cccHHHHHHHHHHhcccCCCCceEEEecCCCCCCCCcEehhhccCC
Confidence 8877654211 1457889999999999999999999999999999999999998764
No 86
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=3.9e-64 Score=533.01 Aligned_cols=509 Identities=17% Similarity=0.165 Sum_probs=396.2
Q ss_pred CCCCCCCCCCChhhHHHHHhhcCCCCceEEECC-----ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHH
Q 008636 5 KPNPANSCPLTPLGFIERAATACDDCPSIIYND-----TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYE 79 (558)
Q Consensus 5 ~~~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~-----~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~ 79 (558)
...|.+..+.|+.++|++++.++|+++|+++.+ +.+||+||.+++.++|++|.++|+++||+|+++++|++++++
T Consensus 30 ~~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~~ 109 (614)
T PRK08180 30 SAEPLGDYPRRLTDRLVHWAQEAPDRVFLAERGADGGWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHAL 109 (614)
T ss_pred cCCCCCCcCccHHHHHHHHHHHCCCCceeeeccCCCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHH
Confidence 345677788899999999999999999998742 689999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCcEEEeccccCC-----hHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCC
Q 008636 80 LHFAVPMSGAIFNTINTRLD-----ARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSS 154 (558)
Q Consensus 80 ~~lA~~~~G~~~v~l~~~~~-----~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (558)
++|||+++|++++|++|.++ .+++.++++.++++++|+++.. .+......... ....++........
T Consensus 110 ~~lA~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~--~~~~~~~~~~~--~~~~~i~~~~~~~~---- 181 (614)
T PRK08180 110 LALAAMYAGVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGA--AFARALAAVVP--ADVEVVAVRGAVPG---- 181 (614)
T ss_pred HHHHHHHcCCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHH--HHHHHHhhhcc--CCceEEEecCCCCC----
Confidence 99999999999999999988 7899999999999999997531 11111111110 01222222211000
Q ss_pred CCCCCCCCCCchhhHHHhhcCCCCCC--CCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccC--CC
Q 008636 155 SPPPRIPPADFVDTYENMLAKGDPQF--SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVP--KQ 230 (558)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~--~~ 230 (558)
.....+.++........ .......++++++|+|||||||.||+|.+||+++..........+... ..
T Consensus 182 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~ 252 (614)
T PRK08180 182 ---------RAATPFAALLATPPTAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPFLAEEP 252 (614)
T ss_pred ---------cccccHHHHhccccccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccccCCCC
Confidence 00133444443321110 111234578999999999999999999999999987776655555543 56
Q ss_pred CEEEEecCchhhhhh-hHHHHHHHhcceEEEecC-CC---HHHHHHHHHHhCCcEEEehHHHHHHHhcCc------cccC
Q 008636 231 SVLLWTLPMFHNNGW-SFTWGAAVVGATNVCLRK-FD---APTVFALIRKHGVTHMCGAPIVLNLLSSSP------EAKQ 299 (558)
Q Consensus 231 ~~~~~~~p~~~~~g~-~~~~~~l~~g~~~~~~~~-~~---~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~------~~~~ 299 (558)
+++++.+|++|..|+ ..++.+++.|+++++.+. ++ ...+++.++++++|+++++|.++..|++.. ....
T Consensus 253 ~~~l~~lPl~h~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~ 332 (614)
T PRK08180 253 PVLVDWLPWNHTFGGNHNLGIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAALRRRF 332 (614)
T ss_pred cEEEEecchHHHhhHHHHHHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchhhhhhh
Confidence 899999999999887 457788899999988763 34 356788999999999999999999987643 1234
Q ss_pred CCCceEEEEecCCCChhhhHHhhh-----c--CCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceeccc
Q 008636 300 LDRPVRILTAGSPPPAPVLLRTES-----L--GFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGL 372 (558)
Q Consensus 300 ~~~l~~v~~~g~~l~~~~~~~~~~-----~--~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 372 (558)
++++|.+++||+++++++.+.+.+ + ++++++.||+||+++++...... ....+++|.|.+++
T Consensus 333 ~~~lr~v~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~-----------~~~~~svG~p~pg~ 401 (614)
T PRK08180 333 FSRLKLLFYAGAALSQDVWDRLDRVAEATCGERIRMMTGLGMTETAPSATFTTGP-----------LSRAGNIGLPAPGC 401 (614)
T ss_pred ccceeEEEEccCCCCHHHHHHHHHHHHhhcCCCceeeeeecccccCCceEecccc-----------cCCCCcccCccCCc
Confidence 679999999999999999988874 2 37899999999998766543211 12346899999998
Q ss_pred ceeeEeCCCCCcccCCCCCeeeEEEEecccccccccCCchhhcccc-cCCceeeCceeEE----ccCCcEEEecccCCee
Q 008636 373 TEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM-KDGRYYTGDVGMM----HPDGYLEIKDRSKDVI 447 (558)
Q Consensus 373 ~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~----~~~g~l~~~GR~~d~i 447 (558)
+++++|+. ..|||+++|++++.|||++|+.+...| .+|||+|||+|++ |++|.+++.||++|+|
T Consensus 402 -~v~i~d~~----------~~GEi~vrg~~v~~GY~~~p~~t~~~~~~dgw~~TGDlg~~~~~~d~~g~l~i~GR~~d~i 470 (614)
T PRK08180 402 -EVKLVPVG----------GKLEVRVKGPNVTPGYWRAPELTAEAFDEEGYYRSGDAVRFVDPADPERGLMFDGRIAEDF 470 (614)
T ss_pred -EEEEecCC----------CCcEEEEecCccchhhcCChhHhHhhcccCCceeccceEEecCCcCCCCceEEecchhhhE
Confidence 99998852 359999999999999999999998888 4899999999999 4689999999999988
Q ss_pred e-eCceeec--hHHHHHHHhcCCCcceeEEEeeeCCCCCceeEEEEEecCCCC----------CCCCCCCHHHHHHHHHh
Q 008636 448 I-SGGENIS--STEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTD----------SGGMMTTEKDIIQYCRA 514 (558)
Q Consensus 448 ~-~~G~~v~--~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~----------~~~~~~~~~~l~~~~~~ 514 (558)
+ .+|++|+ +.++|..+.++|.|.+++|++.+++. +.++|++.++.. +.....+.+++++++.+
T Consensus 471 ~~~~G~~i~~~p~Eie~~l~~~p~V~~a~V~g~~~~~----~~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 546 (614)
T PRK08180 471 KLSSGTWVSVGPLRARAVSAGAPLVQDVVITGHDRDE----IGLLVFPNLDACRRLAGLLADASLAEVLAHPAVRAAFRE 546 (614)
T ss_pred EcCCCcEecchhhhHHHHhhcCchhheEEEEcCCCCc----eEEEEEcCHHHHHHHHhhcccCCHHHHhcCHHHHHHHHH
Confidence 8 6798777 77888999999999999999988764 668887765420 00000234567777777
Q ss_pred cCCCcc--------ccCeEEEecccCCC------CCCcchhHHHHHHHhhcccccC
Q 008636 515 RIPRYM--------VPKTVVFIDELPKT------ATGKVQKYVLGDIANSMSMSHS 556 (558)
Q Consensus 515 ~l~~~~--------~p~~i~~v~~~P~t------~~GK~~r~~l~~~~~~~~~~~~ 556 (558)
.|..+. +|+.+++++++|++ ++||+.|.++.+.|++.+..-|
T Consensus 547 ~l~~~~~~~~~~~~~p~~~~~~~~~p~~~~gk~t~~~~~~R~~~~~~y~~~i~~lY 602 (614)
T PRK08180 547 RLARLNAQATGSSTRVARALLLDEPPSLDAGEITDKGYINQRAVLARRAALVEALY 602 (614)
T ss_pred HHHHHHhhccccHhheeEEEEecCCCCCccCccCccccccHHHHHHHhHHHHHHHh
Confidence 666665 89999999999976 5778999999999998876554
No 87
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=9e-64 Score=496.89 Aligned_cols=501 Identities=27% Similarity=0.402 Sum_probs=413.8
Q ss_pred HHHHhhc-CCCCceEEECC------ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEE
Q 008636 20 IERAATA-CDDCPSIIYND------TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFN 92 (558)
Q Consensus 20 l~~~a~~-~p~~~a~~~~~------~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (558)
+++..+. .++.+|+++.+ ..+||.++.+++.++|..|.+.|+++||+|++++|+.+++++++|||+++|++.+
T Consensus 70 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~e~~ia~lA~~r~Gai~~ 149 (626)
T KOG1175|consen 70 LDRHIKEKGGDKVAIIFEGNEGGDTEVWTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIPEAVIAMLACARIGAIHS 149 (626)
T ss_pred hhhhhhhcCCCCcEEEEEecCCCceEEEEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCChHHHHHHHHHhhcCeEEE
Confidence 4444333 48899998853 3489999999999999999999999999999999999999999999999999999
Q ss_pred eccccCChHHHHHHHhhcCccEEEEeCcCh---------HHHHHHhhcCCCCCCC-CcEEEEcCCccccCCCCCCCCCCC
Q 008636 93 TINTRLDARTISIILKHSESKLVFVDHLSS---------SLLLEVVSLFPPHSKT-PKLVLITDDKEISSSSSPPPRIPP 162 (558)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 162 (558)
++-..+++.++...++.++++++|+.+... ....++.......... ...+.+.....
T Consensus 150 ~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~------------- 216 (626)
T KOG1175|consen 150 SVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRRNR------------- 216 (626)
T ss_pred EeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEecccc-------------
Confidence 999999999999999999999999965332 2233332222211101 11111111100
Q ss_pred CCchhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHH-hcccccccCCCCEEEEecCchh
Q 008636 163 ADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAV-DSLIDWVVPKQSVLLWTLPMFH 241 (558)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~ 241 (558)
...++..+....+... ..+.+.+|+.+|+|||||||.||++.+++........ .....+.++++|++.+..-+.+
T Consensus 217 ---d~~~~~~~~~a~~~~~-~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~d~q~~dv~~~~~d~GW 292 (626)
T KOG1175|consen 217 ---DLFWSLELKKASPEHP-CVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHFDLQPSDVLWCASDLGW 292 (626)
T ss_pred ---cccHHHHhhhcCCCCC-ceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceeccCCCcceEEEecccCe
Confidence 2344444444443333 4567889999999999999999999998888755444 4555678999999999999999
Q ss_pred hhhh-hHHHHHHHhcceEEEec--CCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc----cccCCCCceEEEEecCCCC
Q 008636 242 NNGW-SFTWGAAVVGATNVCLR--KFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP----EAKQLDRPVRILTAGSPPP 314 (558)
Q Consensus 242 ~~g~-~~~~~~l~~g~~~~~~~--~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~----~~~~~~~l~~v~~~g~~l~ 314 (558)
+.|. +..+++++.|+++++.+ ++++..+++.+.+|++|.+++.|+.++.|.+.. .....++||.+.+.||++.
T Consensus 293 i~g~~~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~~~~~~~sLk~~~S~Gepi~ 372 (626)
T KOG1175|consen 293 ITGHSYVLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDVTSYSLKSLRTCGSVGEPIN 372 (626)
T ss_pred eeccchhhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcceEEEEeccHHHHHHHHhccccccccccceEEEEeecCccCC
Confidence 9887 45778999999999987 358999999999999999999999999776655 2233467999999999999
Q ss_pred hhhhHHhh-hcCC-eeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCe
Q 008636 315 APVLLRTE-SLGF-IVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQT 392 (558)
Q Consensus 315 ~~~~~~~~-~~~~-~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~ 392 (558)
++.++++. ..+. +|+..||+||+|+.+..+..... ...+++.+.|.++. .+.|.|+ +|+.++.++ +
T Consensus 373 ~~~~ew~~~~~~~~pv~e~~~qtEtG~~~i~~~~g~~---------p~~pg~~~~p~~g~-~v~i~de-~g~~~~~~~-~ 440 (626)
T KOG1175|consen 373 PEAWEWWKRVTGLDPIYETYGQTETGGICITPKPGKL---------PIKPGSAGKPFPGY-DVQILDE-NGNELPPST-G 440 (626)
T ss_pred cchHHHHHHhcCccchhhceeeeccCceeeeccCCCC---------CcCccccCCCCCCc-ceEEECC-CCCCcCCCC-c
Confidence 99999998 4566 69999999999999888763321 35678899999999 9999998 888888876 7
Q ss_pred eeEEEEecc---cccccccCCchhhccc-cc--CCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcC
Q 008636 393 RGEIVMRGG---SLMLGYLKDPEATSKC-MK--DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSH 466 (558)
Q Consensus 393 ~Gel~v~~~---~~~~gy~~~~~~~~~~-~~--~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~ 466 (558)
.|+|+++.+ +.+++||+|++..... |. .|+|.|||.+++|+||+++++||+||+|+++|.++++.|||+++.+|
T Consensus 441 ~G~l~~~~~~P~~~~r~~~~n~erf~~~yf~k~pg~y~tGD~~~rd~dGY~~i~GR~DDviNvsGhRigtaEIE~al~~h 520 (626)
T KOG1175|consen 441 NGELRLKPPWPPGMFRTLWGNHERFRAAYFKKFPGYYFTGDGGRRDEDGYYWILGRVDDVINVSGHRIGTAEIESALVEH 520 (626)
T ss_pred eeEEEEeCCCCccccccccCCHHHhhhhhcccCCceEEecCceEEcCCceEEEEecccccccccceeecHHHHHHHHhhC
Confidence 799999986 6789999999844433 43 79999999999999999999999999999999999999999999999
Q ss_pred CCcceeEEEeeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHH
Q 008636 467 PMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGD 546 (558)
Q Consensus 467 ~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~ 546 (558)
|.|.|++|++.+++..|+.+++||+++++.. +.....++|++.+++.+.++..|+.|++++.||+|.+||+.|+.||+
T Consensus 521 p~VaEsAvVg~p~~~~ge~v~aFvvl~~g~~--~~~~L~kel~~~VR~~igp~a~P~~I~~v~~LPkTrSGKimRr~lrk 598 (626)
T KOG1175|consen 521 PAVAESAVVGSPDPIKGEVVLAFVVLKSGSH--DPEQLTKELVKHVRSVIGPYAVPRLIVFVPGLPKTRSGKIMRRALRK 598 (626)
T ss_pred cchhheeeecCCCCCCCeEEEEEEEEcCCCC--ChHHHHHHHHHHHHhhcCcccccceeEecCCCCccccchhHHHHHHH
Confidence 9999999999999999999999999999843 22245678888899999999999999999999999999999999999
Q ss_pred HHhhc
Q 008636 547 IANSM 551 (558)
Q Consensus 547 ~~~~~ 551 (558)
++++.
T Consensus 599 i~~g~ 603 (626)
T KOG1175|consen 599 IASGK 603 (626)
T ss_pred HhccC
Confidence 98875
No 88
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=6.1e-64 Score=614.25 Aligned_cols=504 Identities=22% Similarity=0.259 Sum_probs=423.8
Q ss_pred CCCCCCCCCCCChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHH
Q 008636 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFA 83 (558)
Q Consensus 4 ~~~~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA 83 (558)
+.....+..+.++.++|+++++++|+++|+++.++++||+||.++++++|+.|.++|+++|++|+|++++++++++++||
T Consensus 502 ~~~~~~~~~~~~~~~~~~~~a~~~pd~~Al~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~~~vv~~la 581 (3956)
T PRK12467 502 WNAPATEYAPDCVHQLIEAQARQHPERPALVFGEQVLSYAELNRQANRLAHVLIAAGVGPDVLVGIAVERSIEMVVGLLA 581 (3956)
T ss_pred cCCCCCCCCCCCHHHHHHHHHHHCCCCeEEEeCCceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHH
Confidence 44455555678999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCcEEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCC
Q 008636 84 VPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPA 163 (558)
Q Consensus 84 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (558)
|+++|++++|++|.++.+++..++++++++++|++.+....+. .. ....++.+......
T Consensus 582 il~aG~~~vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~-------~~-~~~~~~~~~~~~~~------------- 640 (3956)
T PRK12467 582 VLKAGGAYVPLDPEYPQDRLAYMLDDSGVRLLLTQSHLLAQLP-------VP-AGLRSLCLDEPADL------------- 640 (3956)
T ss_pred HHHhCcEEeccCCCChHHHHHHHHHhcCCCEEEechhhhhhcc-------cc-cCccEEEecccccc-------------
Confidence 9999999999999999999999999999999999874332210 00 01122222211100
Q ss_pred CchhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhh
Q 008636 164 DFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243 (558)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 243 (558)
.... ..........++++++|+|||||||.||||.++|+++..........+++.++++++...|++|..
T Consensus 641 ---------~~~~-~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~ 710 (3956)
T PRK12467 641 ---------LCGY-SGHNPEVALDPDNLAYVIYTSGSTGQPKGVAISHGALANYVCVIAERLQLAADDSMLMVSTFAFDL 710 (3956)
T ss_pred ---------cccc-CCCCCCCCCCCCCeEEEEECCCCCCCcCEEEEecHHHHHHHHHHHHhcCCCCCCEEEEecCccHhH
Confidence 0000 000111235678999999999999999999999999998888888888899999999999999999
Q ss_pred hhhHHHHHHHhcceEEEecC---CCHHHHHHHHHHhCCcEEEehHHHHHHHhcCccccCCCCceEEEEecCCCChhhhHH
Q 008636 244 GWSFTWGAAVVGATNVCLRK---FDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAGSPPPAPVLLR 320 (558)
Q Consensus 244 g~~~~~~~l~~g~~~~~~~~---~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~~l~~v~~~g~~l~~~~~~~ 320 (558)
++..++.+++.|+++++.+. .++..+++.|+++++|++.++|++++.|++........++|.+++|||++++++.+.
T Consensus 711 ~~~~~~~~L~~G~~lv~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~lr~i~~gGe~l~~~~~~~ 790 (3956)
T PRK12467 711 GVTELFGALASGATLHLLPPDCARDAEAFAALMADQGVTVLKIVPSHLQALLQASRVALPRPQRALVCGGEALQVDLLAR 790 (3956)
T ss_pred HHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEEcCHHHHHHHHhhhccccCCcccEEEEEeecCCHHHHHH
Confidence 99999999999999999874 689999999999999999999999999988765555678899999999999999999
Q ss_pred hhhc--CCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEE
Q 008636 321 TESL--GFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVM 398 (558)
Q Consensus 321 ~~~~--~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v 398 (558)
+.+. ++++++.||+||++..++....... .......++|.|.++. .++|+|+ ++++++.| +.|||+|
T Consensus 791 ~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~-------~~~~~~~~iG~p~~~~-~~~i~d~-~~~~vp~G--~~GEL~i 859 (3956)
T PRK12467 791 VRALGPGARLINHYGPTETTVGVSTYELSDE-------ERDFGNVPIGQPLANL-GLYILDH-YLNPVPVG--VVGELYI 859 (3956)
T ss_pred HHHhCCCCEEEeCcCCChhhhheeeEecccc-------cccCCCCcccCCcCCC-EEEEECC-CCCCCCCC--CceEEEe
Confidence 9854 6899999999999876655432111 0011135699999998 9999997 67888888 8899999
Q ss_pred ecccccccccCCchhhccccc--------CCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcc
Q 008636 399 RGGSLMLGYLKDPEATSKCMK--------DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVN 470 (558)
Q Consensus 399 ~~~~~~~gy~~~~~~~~~~~~--------~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~ 470 (558)
+|+++++||+++|+.+.+.|. .+||+|||+|++++||.+++.||+||+||++|++|+|.+||+.|.++|+|.
T Consensus 860 ~G~~v~~GYl~~p~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~vki~G~rI~~~eIE~~L~~~p~V~ 939 (3956)
T PRK12467 860 GGAGLARGYHRRPALTAERFVPDPFGADGGRLYRTGDLARYRADGVIEYLGRMDHQVKIRGFRIELGEIEARLLAQPGVR 939 (3956)
T ss_pred cccccchhhcCCccccHhhCcCCCCCCCCceeEecCceeEEcCCCcEEEeccccCeEEECCEecCHHHHHHHHHhCCCcc
Confidence 999999999999999988872 239999999999999999999999999999999999999999999999999
Q ss_pred eeEEEeeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHhh
Q 008636 471 EAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANS 550 (558)
Q Consensus 471 ~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~ 550 (558)
+++|++.++. .+..+++++++.......+.....+++++++++.||.|++|..++++++||+|++||++|++|++....
T Consensus 940 ~a~v~~~~~~-~~~~lva~vv~~~~~~~~~~~~~~~~l~~~l~~~Lp~y~vP~~~~~l~~lP~t~~GKidR~~L~~~~~~ 1018 (3956)
T PRK12467 940 EAVVLAQPGD-AGLQLVAYLVPAAVADGAEHQATRDELKAQLRQVLPDYMVPAHLLLLDSLPLTPNGKLDRKALPKPDAS 1018 (3956)
T ss_pred eEEEEEEcCC-CCcEEEEEEEecccccccccccCHHHHHHHHHhhCchhcCCceEeeecccCCCCCCCcCHhhcCCcccc
Confidence 9999986544 467899999865443222223567899999999999999999999999999999999999999876543
No 89
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=4.7e-64 Score=624.46 Aligned_cols=485 Identities=21% Similarity=0.238 Sum_probs=417.0
Q ss_pred CCChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEE
Q 008636 13 PLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFN 92 (558)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (558)
+.++.++|+++++++|+++|+++.++++||+||.++++++|+.|.+.|+++|++|+|+++|++++++++|||+++|++++
T Consensus 510 ~~~~~~~~~~~a~~~p~~~A~~~~~~~~TY~eL~~~~~~lA~~L~~~gv~~g~~V~l~~~~s~~~i~~~la~~~aG~~~v 589 (5163)
T PRK12316 510 QRGVHRLFEEQVERTPEAPALAFGEETLDYAELNRRANRLAHALIERGVGPDVLVGVAMERSIEMVVALLAILKAGGAYV 589 (5163)
T ss_pred CCCHHHHHHHHHHHCCCCeEEEeCCceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCCEEe
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhHHHh
Q 008636 93 TINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENM 172 (558)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (558)
|++|.++.+++..+++.++++++|++......+. .. ....++.++.....
T Consensus 590 pld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~----~~----~~~~~~~~~~~~~~---------------------- 639 (5163)
T PRK12316 590 PLDPEYPAERLAYMLEDSGVQLLLSQSHLGRKLP----LA----AGVQVLDLDRPAAW---------------------- 639 (5163)
T ss_pred ccCccCcHHHHHHHHHhCCCCEEEEChhhhhhCC----cc----cCceEEEecCcchh----------------------
Confidence 9999999999999999999999999875432211 00 01222222211100
Q ss_pred hcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhhhHHHHHH
Q 008636 173 LAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAA 252 (558)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l 252 (558)
... ...........++++++|+|||||||.||||.++|+++.....+....+++..++++++..|++|..++..++.++
T Consensus 640 ~~~-~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~p~~fd~~~~~~~~~L 718 (5163)
T PRK12316 640 LEG-YSEENPGTELNPENLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQQAYGLGVGDTVLQKTPFSFDVSVWEFFWPL 718 (5163)
T ss_pred hcc-CCCCCCCCCCCCCCeEEEEECCCcCCCCCEeeEcCHHHHHHHHHHHHhcCCCCCCEEEeeCCeehHHHHHHHHHHH
Confidence 000 0001111234678999999999999999999999999998888888888999999999999999999999999999
Q ss_pred HhcceEEEec---CCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCccccCCCCceEEEEecCCCChhhhHHhhh-c-CCe
Q 008636 253 VVGATNVCLR---KFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAGSPPPAPVLLRTES-L-GFI 327 (558)
Q Consensus 253 ~~g~~~~~~~---~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~~l~~v~~~g~~l~~~~~~~~~~-~-~~~ 327 (558)
+.|+++++.+ .+++..+++.++++++|++.++|++++.|.+......++++|.+++|||++++++.+.+.+ + +++
T Consensus 719 ~~G~~l~i~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~l~~~~~gGe~l~~~~~~~~~~~~~~~~ 798 (5163)
T PRK12316 719 MSGARLVVAAPGDHRDPAKLVELINREGVDTLHFVPSMLQAFLQDEDVASCTSLRRIVCSGEALPADAQEQVFAKLPQAG 798 (5163)
T ss_pred hCCCEEEECCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhccccccCCCccEEEEeeccCCHHHHHHHHHhCCCCe
Confidence 9999999985 3689999999999999999999999999988766667889999999999999999999863 3 789
Q ss_pred eeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecccccccc
Q 008636 328 VSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGY 407 (558)
Q Consensus 328 v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy 407 (558)
+++.||+||++..+...... .......++|.|.+++ +++|+|+ ++++++.| +.|||+|+|++++.||
T Consensus 799 l~n~YG~TE~~~~~~~~~~~---------~~~~~~~~iG~p~~~~-~~~i~d~-~~~~~p~G--~~GEl~i~G~~v~~GY 865 (5163)
T PRK12316 799 LYNLYGPTEAAIDVTHWTCV---------EEGGDSVPIGRPIANL-ACYILDA-NLEPVPVG--VLGELYLAGRGLARGY 865 (5163)
T ss_pred EEeCcCcChheeeeeEEecc---------cccCCCCCCccccCCC-EEEEECC-CCCCCCCC--CceEEEecccccChhh
Confidence 99999999998554432211 0112235789999998 9999997 68888888 7899999999999999
Q ss_pred cCCchhhccccc-------CCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCC
Q 008636 408 LKDPEATSKCMK-------DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480 (558)
Q Consensus 408 ~~~~~~~~~~~~-------~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~ 480 (558)
+++|+.+...|. ++||+|||+|++++||.+++.||+||+||++|++|+|.+||+.|.++|+|.+++|++.+
T Consensus 866 l~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~dG~l~~~GR~d~~ik~~G~rI~~~EIE~~l~~~p~V~~a~V~~~~-- 943 (5163)
T PRK12316 866 HGRPGLTAERFVPSPFVAGERMYRTGDLARYRADGVIEYAGRIDHQVKLRGLRIELGEIEARLLEHPWVREAAVLAVD-- 943 (5163)
T ss_pred CCChhhhhhhCCCCCCCCCCeeEecCccEEECCCCCEEeecccCCEEEEceEEcChHHHHHHHHhCCCcceEEEEEcC--
Confidence 999999988872 35999999999999999999999999999999999999999999999999999999886
Q ss_pred CCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHhh
Q 008636 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANS 550 (558)
Q Consensus 481 ~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~ 550 (558)
++.++++|++.++.. ...++++++++++||.|++|..++++++||+|++||++|++|++....
T Consensus 944 --~~~lva~vv~~~~~~-----~~~~~l~~~l~~~Lp~y~vP~~i~~v~~lP~t~~GKidr~~L~~~~~~ 1006 (5163)
T PRK12316 944 --GKQLVGYVVLESEGG-----DWREALKAHLAASLPEYMVPAQWLALERLPLTPNGKLDRKALPAPEAS 1006 (5163)
T ss_pred --CCeEEEEEEccCCCC-----CCHHHHHHHHHhhCCCccCCCeEEEHhhCCCCCCCChhHHhhcCcccc
Confidence 677999999876543 678899999999999999999999999999999999999999876443
No 90
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=6.4e-64 Score=623.30 Aligned_cols=488 Identities=21% Similarity=0.257 Sum_probs=415.5
Q ss_pred CCChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEE
Q 008636 13 PLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFN 92 (558)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (558)
..++.++|+++++++|+++|+++.++.+||+||.+++.++|..|.++|+++|++|+|++++++++++++|||+++|++++
T Consensus 2002 ~~~~~~~~~~~a~~~p~~~A~~~~~~~lTy~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~~~~~lAil~aGa~~v 2081 (5163)
T PRK12316 2002 GPGVHQRIAEQAARAPEAIAVVFGDQHLSYAELDSRANRLAHRLRARGVGPEVRVAIAAERSFELVVALLAVLKAGGAYV 2081 (5163)
T ss_pred CCCHHHHHHHHHHhCCCCeEEEcCCCeEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhceEEe
Confidence 34899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhHHHh
Q 008636 93 TINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENM 172 (558)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (558)
|++|.++.+++..+++++++++++++.+....+.. . .....+.+.... .+
T Consensus 2082 pld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~-------~-~~~~~~~~~~~~-------------------~~--- 2131 (5163)
T PRK12316 2082 PLDPNYPAERLAYMLEDSGAALLLTQRHLLERLPL-------P-AGVARLPLDRDA-------------------EW--- 2131 (5163)
T ss_pred ecCCCCCHHHHHHHHHhcCCCEEEeChhhhhhccc-------c-cccceEeccchh-------------------hh---
Confidence 99999999999999999999999998754432210 0 011111111100 00
Q ss_pred hcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhhhHHHHHH
Q 008636 173 LAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAA 252 (558)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l 252 (558)
... ..........++++++|+|||||||.||||.++|+++..........++++++++++...|++|..++..++.++
T Consensus 2132 -~~~-~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~L 2209 (5163)
T PRK12316 2132 -ADY-PDTAPAVQLAGENLAYVIYTSGSTGLPKGVAVSHGALVAHCQAAGERYELSPADCELQFMSFSFDGAHEQWFHPL 2209 (5163)
T ss_pred -hcc-CccCCCCCCCCCCeEEEEeCccCCCCCCEeEEccHHHHHHHHHHHHhcCCCCcceEEEecCchHHHHHHHHHHHH
Confidence 000 001111235678999999999999999999999999998888888888999999999999999999888999999
Q ss_pred HhcceEEEecC--CCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc-cccCCCCceEEEEecCCCChhhhHHhhh-c-CCe
Q 008636 253 VVGATNVCLRK--FDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP-EAKQLDRPVRILTAGSPPPAPVLLRTES-L-GFI 327 (558)
Q Consensus 253 ~~g~~~~~~~~--~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~-~~~~~~~l~~v~~~g~~l~~~~~~~~~~-~-~~~ 327 (558)
+.|+++++.+. +++..+++.++++++|++.++|++++.|.+.. ......++|.+++|||+++++..++|.+ + +..
T Consensus 2210 ~~G~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~ 2289 (5163)
T PRK12316 2210 LNGARVLIRDDELWDPEQLYDEMERHGVTILDFPPVYLQQLAEHAERDGRPPAVRVYCFGGEAVPAASLRLAWEALRPVY 2289 (5163)
T ss_pred hCCCEEEeCCcccCCHHHHHHHHHHcCCeEEEcChHHHHHHHhhhhcccCCcceeEEEEecccCCHHHHHHHHHhCCCcE
Confidence 99999977653 58999999999999999999999999998765 2233458999999999999999999984 3 688
Q ss_pred eeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecccccccc
Q 008636 328 VSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGY 407 (558)
Q Consensus 328 v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy 407 (558)
+++.||+||++..++....... ........++|.|.++. .++|+|+ +++.++.| .+|||+|+|+++++||
T Consensus 2290 l~n~YG~TE~~~~~~~~~~~~~------~~~~~~~~~iG~p~~~~-~~~i~d~-~~~~vp~g--~~GEl~i~G~~v~~GY 2359 (5163)
T PRK12316 2290 LFNGYGPTEAVVTPLLWKCRPQ------DPCGAAYVPIGRALGNR-RAYILDA-DLNLLAPG--MAGELYLGGEGLARGY 2359 (5163)
T ss_pred EEECccchhheeeeeeeecccc------cccCCCcCCcccccCCC-EEEEECC-CCCCCCCC--CeeEEEecchhhcccc
Confidence 9999999999876554322111 00011124789999998 9999997 67888888 8999999999999999
Q ss_pred cCCchhhccccc--------CCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeC
Q 008636 408 LKDPEATSKCMK--------DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479 (558)
Q Consensus 408 ~~~~~~~~~~~~--------~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~ 479 (558)
+++|+.+...|. ++||+|||+|++++||.++++||+||+||++|++|+|.+||+.|.++|+|.+++|++.++
T Consensus 2360 ~~~p~~T~~~f~~~~~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rie~~eIE~~l~~~~~v~~a~v~~~~~ 2439 (5163)
T PRK12316 2360 LNRPGLTAERFVPDPFSASGERLYRTGDLARYRADGVVEYLGRIDHQVKIRGFRIELGEIEARLQAHPAVREAVVVAQDG 2439 (5163)
T ss_pred cCChhhhhhhccCCCCCCCCCeeEecccEEEEcCCCcEEEecCCCCeEEEcCccCChHHHHHHHhhCcccceEEEEEEec
Confidence 999999998882 359999999999999999999999999999999999999999999999999999999876
Q ss_pred CCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHH
Q 008636 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIA 548 (558)
Q Consensus 480 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~ 548 (558)
. .++.++++++..++.. ...+++++++++.||.|++|..++++++||+|++||++|++|++..
T Consensus 2440 ~-~~~~l~a~v~~~~~~~-----~~~~~l~~~l~~~Lp~~~vP~~~~~l~~lP~t~~GKidR~~L~~~~ 2502 (5163)
T PRK12316 2440 A-SGKQLVAYVVPDDAAE-----DLLAELRAWLAARLPAYMVPAHWVVLERLPLNPNGKLDRKALPKPD 2502 (5163)
T ss_pred C-CCeEEEEEEEecCCCc-----cCHHHHHHHHHhhCchhcCcceEeeecccCCCCCCccCHhhcCCCc
Confidence 6 6889999999877654 6788999999999999999999999999999999999999998754
No 91
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8e-63 Score=508.19 Aligned_cols=455 Identities=27% Similarity=0.355 Sum_probs=387.2
Q ss_pred hcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHH
Q 008636 25 TACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTIS 104 (558)
Q Consensus 25 ~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~ 104 (558)
...++++|+.+.++++||+||.++++++|..|. ++|+|+++++|++++++++|||+++|++++++++..+.+++.
T Consensus 11 ~~~~~~~a~~~~~~~~Ty~el~~~~~~~a~~L~-----~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~ 85 (471)
T PRK07787 11 AAADIADAVRIGGRVLSRSDLAGAATAVAERVA-----GARRVAVLATPTLATVLAVVGALIAGVPVVPVPPDSGVAERR 85 (471)
T ss_pred cccCCceEEEeCCcEEEHHHHHHHHHHHHHHhc-----cCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCCChHHHH
Confidence 346799999999999999999999999999996 479999999999999999999999999999999999999999
Q ss_pred HHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhHHHhhcCCCCCCCCCC
Q 008636 105 IILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVR 184 (558)
Q Consensus 105 ~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (558)
.+++++++++++++.+... . ...... ..... ..+ ....
T Consensus 86 ~~l~~~~~~~il~~~~~~~------~------~~~~~~-~~~~~------------------~~~-----------~~~~ 123 (471)
T PRK07787 86 HILADSGAQAWLGPAPDDP------A------GLPHVP-VRLHA------------------RSW-----------HRYP 123 (471)
T ss_pred HHHHhcCCCEEEecCCccc------c------ccccee-eeccc------------------ccc-----------ccCC
Confidence 9999999999999763100 0 000000 00000 000 0001
Q ss_pred CCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhhh-HHHHHHHhcceEEEecC
Q 008636 185 PKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWS-FTWGAAVVGATNVCLRK 263 (558)
Q Consensus 185 ~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~-~~~~~l~~g~~~~~~~~ 263 (558)
...++++++++|||||||.||+|.++|+++..........+.+..+++++..+|++|..|+. .++.++..|+++++.+.
T Consensus 124 ~~~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~ 203 (471)
T PRK07787 124 EPDPDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALAEAWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTGR 203 (471)
T ss_pred CCCCCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHhcCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecCC
Confidence 13567999999999999999999999999988777777777888999999999999998874 58889999999999888
Q ss_pred CCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc-cccCCCCceEEEEecCCCChhhhHHhhh-cCCeeeecccCCCCCCcc
Q 008636 264 FDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP-EAKQLDRPVRILTAGSPPPAPVLLRTES-LGFIVSHGYGKTEIAGVN 341 (558)
Q Consensus 264 ~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~-~~~~~~~l~~v~~~g~~l~~~~~~~~~~-~~~~v~~~YG~tE~g~~~ 341 (558)
+++..+++.++ +++|++.++|+++..+.+.. ....++++|.+++||+++++.+.+.+.+ ++.++++.||+||++...
T Consensus 204 ~~~~~~~~~i~-~~~t~~~~~P~~~~~l~~~~~~~~~l~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~ 282 (471)
T PRK07787 204 PTPEAYAQALS-EGGTLYFGVPTVWSRIAADPEAARALRGARLLVSGSAALPVPVFDRLAALTGHRPVERYGMTETLITL 282 (471)
T ss_pred CCHHHHHHHHh-hCceEEEcchHHHHHHHhCccccccccceeEEEECCCCCCHHHHHHHHHHcCCCeecccCccccCcce
Confidence 89999999999 99999999999999998754 3345778999999999999999999884 689999999999998654
Q ss_pred cccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecccccccccCCchhhccccc-C
Q 008636 342 VSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK-D 420 (558)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~ 420 (558)
..... ......++|.+.++. .++|+|+ ++.+++..+...|||+++|++++.||+++++.+...|. +
T Consensus 283 ~~~~~-----------~~~~~~~vG~~~~g~-~~~i~d~-~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~~~ 349 (471)
T PRK07787 283 STRAD-----------GERRPGWVGLPLAGV-ETRLVDE-DGGPVPHDGETVGELQVRGPTLFDGYLNRPDATAAAFTAD 349 (471)
T ss_pred ecCCC-----------CcccCCcccccCCCc-EEEEECC-CCCCCCCCCCCceEEEEECcccchhhcCChhhchhcccCC
Confidence 43221 112245789999998 9999998 46777644335799999999999999999999888885 8
Q ss_pred CceeeCceeEEccCCcEEEeccc-CCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCCCCCceeEEEEEecCCCCCC
Q 008636 421 GRYYTGDVGMMHPDGYLEIKDRS-KDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSG 499 (558)
Q Consensus 421 g~~~TGD~~~~~~~g~l~~~GR~-~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~ 499 (558)
|||+|||+|++++||.+++.||+ |++++.+|.+|+|.+||+.|.+++.|.+++|++.+++..++.++++++....
T Consensus 350 ~~~~TGDlg~~~~dg~l~~~GR~~d~~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~~---- 425 (471)
T PRK07787 350 GWFRTGDVAVVDPDGMHRIVGRESTDLIKSGGYRIGAGEIETALLGHPGVREAAVVGVPDDDLGQRIVAYVVGADD---- 425 (471)
T ss_pred CceecCceEEEcCCCCEEEeCCCCceeEeeCCEEECHHHHHHHHHhCCCcceEEEEcccccccCeEEEEEEEeCCC----
Confidence 99999999999999999999996 8999999999999999999999999999999999998888999999887332
Q ss_pred CCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHH
Q 008636 500 GMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDI 547 (558)
Q Consensus 500 ~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~ 547 (558)
.+.+++.++++++++++++|..++++++||+|.+||++|+.|+++
T Consensus 426 ---~~~~~l~~~l~~~l~~~~~P~~i~~~~~iP~~~~GKi~r~~L~~~ 470 (471)
T PRK07787 426 ---VAADELIDFVAQQLSVHKRPREVRFVDALPRNAMGKVLKKQLLSE 470 (471)
T ss_pred ---CCHHHHHHHHHhhcccccCCcEEEEeccCCCCCCccccHHHhccC
Confidence 577899999999999999999999999999999999999999763
No 92
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=9.3e-63 Score=512.28 Aligned_cols=481 Identities=26% Similarity=0.366 Sum_probs=387.0
Q ss_pred HHhhcCCCCceEEEC--CccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccccCC
Q 008636 22 RAATACDDCPSIIYN--DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLD 99 (558)
Q Consensus 22 ~~a~~~p~~~a~~~~--~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~ 99 (558)
.++.++|+++|+.+. ++.+||+||.++++++|+.|.++|+++||+|+++++|++++++++|||+++|++++++++.++
T Consensus 5 ~~a~~~p~~~a~~~~~~~~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l~~~~~ 84 (501)
T PRK13390 5 THAQIAPDRPAVIVAETGEQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALVVLWAALRSGLYITAINHHLT 84 (501)
T ss_pred hhhhhCCCCcEEEecCCCeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEeccccCCC
Confidence 467789999999873 689999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhHHHhhcCCCCC
Q 008636 100 ARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179 (558)
Q Consensus 100 ~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (558)
.+++..+++.++++++++++.......+.... ....+.+..... ....+++......+.
T Consensus 85 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~------~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~ 143 (501)
T PRK13390 85 APEADYIVGDSGARVLVASAALDGLAAKVGAD------LPLRLSFGGEID---------------GFGSFEAALAGAGPR 143 (501)
T ss_pred HHHHHHHHHhcCCcEEEEcchhhhHHHHhhhc------cceEEEecCccc---------------ccccHHHHhcccCCC
Confidence 99999999999999999977543322221110 111111111100 012233322211110
Q ss_pred CCCCCCCCCCCceEEEccCCCCCCCceeee--cHHHHHHHH----HhcccccccCCCCEEEEecCchhhhhhhHHHHHHH
Q 008636 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQ--CYKAFFIIA----VDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAV 253 (558)
Q Consensus 180 ~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~--t~~~~~~~~----~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~ 253 (558)
.....++++|+|||||||.||+|.+ +|.++.... ......+.+..+++++..+|++|..++...+..+.
T Consensus 144 -----~~~~~~~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~~~~~~~ 218 (501)
T PRK13390 144 -----LTEQPCGAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFYDISESDIYYSSAPIYHAAPLRWCSMVHA 218 (501)
T ss_pred -----CCCCcccEEEEeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHhCCCCCCeEEecccchhhhHHHHHHHHHh
Confidence 1122357999999999999999995 444443221 11223456788999999999999988755555667
Q ss_pred hcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc----cccCCCCceEEEEecCCCChhhhHHhhh-cCCee
Q 008636 254 VGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP----EAKQLDRPVRILTAGSPPPAPVLLRTES-LGFIV 328 (558)
Q Consensus 254 ~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~----~~~~~~~l~~v~~~g~~l~~~~~~~~~~-~~~~v 328 (558)
.|+++++.+.+++..+++.++++++|++.++|+++..+.+.. ....+++++.++.+|++++.++.+.+.+ ++.++
T Consensus 219 ~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~ 298 (501)
T PRK13390 219 LGGTVVLAKRFDAQATLGHVERYRITVTQMVPTMFVRLLKLDADVRTRYDVSSLRAVIHAAAPCPVDVKHAMIDWLGPIV 298 (501)
T ss_pred cCceEEEcCCcCHHHHHHHHHHcCCeEEEecHHHHHHHHhccchhcccCChhhhheEEEcCCCCCHHHHHHHHHhcCCce
Confidence 899999888889999999999999999999999999887654 2234678999999999999999998884 68899
Q ss_pred eecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEeccccccccc
Q 008636 329 SHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYL 408 (558)
Q Consensus 329 ~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~ 408 (558)
++.||+||+++++.... .......+++|.|.++ .++|+|+ +++++++| +.|||+++|++++.||+
T Consensus 299 ~~~YG~tE~~~~~~~~~----------~~~~~~~~~~G~~~~g--~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~gy~ 363 (501)
T PRK13390 299 YEYYSSTEAHGMTFIDS----------PDWLAHPGSVGRSVLG--DLHICDD-DGNELPAG--RIGTVYFERDRLPFRYL 363 (501)
T ss_pred eeeecccccCceEEecc----------hhhccCCCCcCCcccc--eEEEECC-CCCCCCCC--CceEEEEecCCcccccc
Confidence 99999999987554321 1111234578988887 5888986 77888887 88999999999999999
Q ss_pred CCchhhccccc---CCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCCCCCce
Q 008636 409 KDPEATSKCMK---DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEI 485 (558)
Q Consensus 409 ~~~~~~~~~~~---~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~ 485 (558)
++++.+...+. ++|++|||+|+++++|.+++.||.||+|+.+|.+|+|.+||+.|.++|+|.++++++++++..++.
T Consensus 364 ~~~~~t~~~~~~~~~~w~~tGDl~~~~~dg~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~~~~v~~~~v~~~~~~~~~e~ 443 (501)
T PRK13390 364 NDPEKTAAAQHPAHPFWTTVGDLGSVDEDGYLYLADRKSFMIISGGVNIYPQETENALTMHPAVHDVAVIGVPDPEMGEQ 443 (501)
T ss_pred CChhhhHHhhccCCCceEEcCceEEECCCCeEEEeeccccceeECCeeeCHHHHHHHHHhCCCeeEEEEEeccCcccCce
Confidence 99998877763 689999999999999999999999999999999999999999999999999999999999988999
Q ss_pred eEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHH
Q 008636 486 PCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLG 545 (558)
Q Consensus 486 ~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~ 545 (558)
+++++++.++.... ....+++.++++++|+.+++|..++++++||+|++||++|++|+
T Consensus 444 ~~~~v~~~~~~~~~--~~~~~~l~~~~~~~l~~~~~P~~~~~~~~iP~t~~GKi~r~~L~ 501 (501)
T PRK13390 444 VKAVIQLVEGIRGS--DELARELIDYTRSRIAHYKAPRSVEFVDELPRTPTGKLVKGLLR 501 (501)
T ss_pred eEEEEEecCCCCcc--hhhHHHHHHHHHHhcccCCCCcEEEEeccCCCCCccceehhhcC
Confidence 99999887653211 02356899999999999999999999999999999999999874
No 93
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.2e-62 Score=505.42 Aligned_cols=454 Identities=24% Similarity=0.294 Sum_probs=387.6
Q ss_pred ChhhHH-HHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEe
Q 008636 15 TPLGFI-ERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNT 93 (558)
Q Consensus 15 tl~~~l-~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 93 (558)
++.+.+ ..+++++|+++|+.+.++.+||+||.++++++|..|.+.|+++||+|+++++|++++++++|||+++|+++++
T Consensus 3 ~~~~~~~~~~a~~~~~~~a~~~~~~~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~~~~la~~~~G~~~v~ 82 (458)
T PRK09029 3 IFSDWPWRHWAQVRPQAIALRLNDEVLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETLLAYLALLQCGARVLP 82 (458)
T ss_pred hhhcChHHHHHHhCCCceeeecCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEee
Confidence 344443 5668899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhHHHhh
Q 008636 94 INTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENML 173 (558)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (558)
+++..+.+++..+++++++++++++++... +.. ..... ..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~----------~~~~~-~~---------------------------- 122 (458)
T PRK09029 83 LNPQLPQPLLEELLPSLTLDFALVLEGENT-FSA----------LTSLH-LQ---------------------------- 122 (458)
T ss_pred cCCCCCHHHHHHHHHhcCCCEEEEcCcccc-hhh----------ccccc-cc----------------------------
Confidence 999999999999999999999998775421 100 00000 00
Q ss_pred cCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhhhHHHHHHH
Q 008636 174 AKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAV 253 (558)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~ 253 (558)
.... .......++++++++|||||||.||+|.++|+++..........++...+++++...|++|.+|+..++.++.
T Consensus 123 ~~~~---~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~l~ 199 (458)
T PRK09029 123 LVEG---AHAVAWQPQRLATMTLTSGSTGLPKAAVHTAQAHLASAEGVLSLMPFTAQDSWLLSLPLFHVSGQGIVWRWLY 199 (458)
T ss_pred cccc---cCcccCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHHHHHHhhcCCCCccceEEEecCcHhhhhhHHHHHHHh
Confidence 0000 0011245678999999999999999999999999988877777788899999999999999999887788899
Q ss_pred hcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCccccCCCCceEEEEecCCCChhhhHHhhhcCCeeeeccc
Q 008636 254 VGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYG 333 (558)
Q Consensus 254 ~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~~l~~v~~~g~~l~~~~~~~~~~~~~~v~~~YG 333 (558)
.|+++++.+. ..+++.+. ++|.+..+|+++..+...... ..+++.+++||+++++.+.+.+...+.++++.||
T Consensus 200 ~G~~v~~~~~---~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~--~~~l~~i~~gG~~~~~~~~~~~~~~g~~~~~~YG 272 (458)
T PRK09029 200 AGATLVVRDK---QPLEQALA--GCTHASLVPTQLWRLLDNRSE--PLSLKAVLLGGAAIPVELTEQAEQQGIRCWCGYG 272 (458)
T ss_pred CCceEEeCCh---HHHHHHHh--hceeeecChHHHHHHHhcccc--CCcceEEEECCCCCCHHHHHHHHHcCCcEecccc
Confidence 9999988764 55667763 799999999999998876533 4479999999999999999998888999999999
Q ss_pred CCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecccccccccCCchh
Q 008636 334 KTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEA 413 (558)
Q Consensus 334 ~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~ 413 (558)
+||++........ ....++|.+.+++ .++|.+ |||+++|+.++.||+++++.
T Consensus 273 ~tE~~~~~~~~~~-------------~~~~~~G~~~~~~-~~~i~~--------------gel~v~g~~~~~gY~~~~~~ 324 (458)
T PRK09029 273 LTEMASTVCAKRA-------------DGLAGVGSPLPGR-EVKLVD--------------GEIWLRGASLALGYWRQGQL 324 (458)
T ss_pred ccccCcceeccCC-------------CCCCCCCCCCCCC-EEEEeC--------------CEEEEecCceeeeeecCccc
Confidence 9999865443210 1124589899887 888864 89999999999999999887
Q ss_pred hcccccCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCCCCCceeEEEEEec
Q 008636 414 TSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLK 493 (558)
Q Consensus 414 ~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~ 493 (558)
+.....+|||+|||+|+++ ||.+++.||++|+|+.+|.+|+|.+||+.|.++|+|.+++|++.+++..++.+++++++.
T Consensus 325 ~~~~~~~~~~~TGD~~~~~-~g~l~~~gR~~d~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~ 403 (458)
T PRK09029 325 VPLVNDEGWFATRDRGEWQ-NGELTILGRLDNLFFSGGEGIQPEEIERVINQHPLVQQVFVVPVADAEFGQRPVAVVESD 403 (458)
T ss_pred cccccCCCccCCCCcEEEe-CCEEEEecccccceeeCCEEeCHHHHHHHHhcCCCcceEEEEccCCcccCceEEEEEEcC
Confidence 7655578999999999999 999999999999999999999999999999999999999999999998899999998876
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHhhcccc
Q 008636 494 TGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSMSMS 554 (558)
Q Consensus 494 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~~~~~ 554 (558)
.. ...++++++++++|++|++|..+++++++|+|.+||++|+.|++++++...+
T Consensus 404 ~~-------~~~~~l~~~~~~~l~~~~~P~~~~~~~~~p~t~~gKi~r~~L~~~~~~~~~~ 457 (458)
T PRK09029 404 SE-------AAVVNLAEWLQDKLARFQQPVAYYLLPPELKNGGIKISRQALKEWVAQQLGN 457 (458)
T ss_pred cc-------cCHHHHHHHHHhhchhccCCeEEEEecccccCcCCCcCHHHHHHHHHhccCC
Confidence 32 5778999999999999999999999999999999999999999999976543
No 94
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=1.5e-63 Score=501.94 Aligned_cols=505 Identities=26% Similarity=0.320 Sum_probs=383.9
Q ss_pred CCChhhHHHHHhhcCCCCceEEEC----CccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcC
Q 008636 13 PLTPLGFIERAATACDDCPSIIYN----DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSG 88 (558)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~----~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G 88 (558)
..++...+.++++.+|+.+|+... .+.+||+|+.+++..+|.+|+..|+.+||+|+|++.|+++|+++.+||+.+|
T Consensus 15 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ty~e~~~~v~~~a~gL~~lg~~~gdrvai~a~nr~eW~i~d~a~~~~g 94 (613)
T COG1022 15 IHTLPKRLAERVKDRPDGVALMYKELGGWEAITYRELYERVRALASGLLSLGIPAGDRVAIFAANRPEWAIADLAILALG 94 (613)
T ss_pred cccHHHHHHHHhhcCCcceeEeeecCCcceEeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHHcC
Confidence 457889999999999999898864 3789999999999999999999999779999999999999999999999999
Q ss_pred cEEEeccccCChHHHHHHHhhcCccEEEEeCc-ChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchh
Q 008636 89 AIFNTINTRLDARTISIILKHSESKLVFVDHL-SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVD 167 (558)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (558)
++.||++++++.+++.++|++++++++|++.. ..+.+.......+............+...... .............
T Consensus 95 ~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 172 (613)
T COG1022 95 AVSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCPKVVDLIVIIDLVREAVEAK--ALVLEVFPDEGIS 172 (613)
T ss_pred CeEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhccccchhhhhhhhhhhhhccchh--hccccccccccch
Confidence 99999999999999999999999999999874 34444444332221000000000000000000 0000000000011
Q ss_pred hHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccc-cCCCCEEEEecCchhhhhhh
Q 008636 168 TYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWV-VPKQSVLLWTLPMFHNNGWS 246 (558)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~~ 246 (558)
.+ . .... .......+..++|+|.|+|||||||.||||++||+|+..+.......+. .+++|+.++.+|+.|+....
T Consensus 173 ~~-~-~~~~-~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~~~~~~d~~LsfLPlaHi~Er~ 249 (613)
T COG1022 173 LF-L-IDSA-GLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLPPIGPGDRVLSFLPLAHIFERA 249 (613)
T ss_pred hh-h-hccc-ccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCCCCCCCcEEEEeCcHHHHHHHH
Confidence 11 1 1111 1111114577899999999999999999999999999999998888886 89999999999999999987
Q ss_pred HH-HHHHHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc----------c-------------------
Q 008636 247 FT-WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP----------E------------------- 296 (558)
Q Consensus 247 ~~-~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~----------~------------------- 296 (558)
+. ...+..|. ......++..++..+++++||++.++|.+|+.+.+.. .
T Consensus 250 ~~~~~~~~~g~--~~~~~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~~~~~~~ 327 (613)
T COG1022 250 FEGGLALYGGV--TVLFKEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYKKISRAL 327 (613)
T ss_pred HHHHHHhhcce--EEEecCCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhh
Confidence 64 33333333 3334458999999999999999999999998865432 0
Q ss_pred --------------------ccC-CCCceEEEEecCCCChhhhHHhhhcCCeeeecccCCCCCCcccccCCCCCCCCCCh
Q 008636 297 --------------------AKQ-LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPA 355 (558)
Q Consensus 297 --------------------~~~-~~~l~~v~~~g~~l~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~ 355 (558)
... ..+++.+++||+++++++...++..|+++.++||+|||+++++.+...
T Consensus 328 ~~~~~~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~~lGi~i~eGYGlTEts~~~~v~~~~-------- 399 (613)
T COG1022 328 LGGGPLSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFRSLGIPILEGYGLTETSAVVSVNPPD-------- 399 (613)
T ss_pred cccCCcchhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHHHcCCCeEEEecccccccceEEcccc--------
Confidence 001 238899999999999999999999999999999999999988876422
Q ss_pred hhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecccccccccCCchhhccccc-CCceeeCceeEEccC
Q 008636 356 RERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK-DGRYYTGDVGMMHPD 434 (558)
Q Consensus 356 ~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~~~~~~ 434 (558)
....+++|.|.++. +++|.|. |||+|+||.+|+|||++|+.|.+.|. ||||+|||+|.+|++
T Consensus 400 ---~~~~gtvG~p~p~~-evKI~d~-------------GEilVRG~~Vm~GYyk~pe~Taeaf~~DGWf~TGDlg~~d~~ 462 (613)
T COG1022 400 ---RFVLGTVGKPLPGI-EVKIADD-------------GEILVRGPNVMKGYYKNPEATAEAFTEDGWFRTGDLGELDED 462 (613)
T ss_pred ---CcccCCcCCcCCCc-eEEEccC-------------ceEEEecchhcchhcCChHHHhhhccccCCcccCceeEEcCC
Confidence 24457889999999 9999994 99999999999999999999999996 999999999999999
Q ss_pred CcEEEecccCCeee-eCceeechHHHHHHHhcCCCcceeEEEeeeCCCCCceeEEEEEecCCCCC------C-CCCCCH-
Q 008636 435 GYLEIKDRSKDVII-SGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDS------G-GMMTTE- 505 (558)
Q Consensus 435 g~l~~~GR~~d~i~-~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~------~-~~~~~~- 505 (558)
|.|+++||++|.|+ .+|+.|.|+.||..+.++|.|.+++|++.... .+.++|++..+.-. . ....+.
T Consensus 463 g~L~i~gRkK~~i~l~~GknIaP~~IE~~l~~~~~I~qi~vvg~~k~----~~~AlIvp~~~~l~~~a~~~~~~~~~~~~ 538 (613)
T COG1022 463 GYLVITGRKKELIKLSNGKNIAPEPIESKLAKSPLIEQICVVGDDKK----FLVALIVPDFDALEKWAESLNKVISASRE 538 (613)
T ss_pred CcEEEeecccceEECCCCcccChHHHHHHHhcCCCeeEEEEEecCCc----ceEEEEeCCHHHHHHHHHhccccccCCHH
Confidence 99999999999999 89999999999999999999999999994333 37888887644211 0 000011
Q ss_pred -----HHHH----HHHH---hcCCCccccCeEEEec-ccC-----CCCCCcchhHHHHHHHhhccc
Q 008636 506 -----KDII----QYCR---ARIPRYMVPKTVVFID-ELP-----KTATGKVQKYVLGDIANSMSM 553 (558)
Q Consensus 506 -----~~l~----~~~~---~~l~~~~~p~~i~~v~-~~P-----~t~~GK~~r~~l~~~~~~~~~ 553 (558)
.++. ..+. .....+..+..+.+++ ++. .|++-|+.|..+.+.+++...
T Consensus 539 ~l~~~~~l~~~~~~~i~~~~~~~~~~E~i~~~~~~~~~~t~~~~~~t~t~klkR~~i~~~~~~~i~ 604 (613)
T COG1022 539 ELARDPKLLKLILPRVNKGNKRLFGFEQIKKFVLLPKEFTPENGELTPTLKLKRHVILDRYKDEIE 604 (613)
T ss_pred HHhhCHHHHHHHHHHHHHHhhcccchhhhheeeecccccccccCccccchhhhHHHHHHhhhhHHH
Confidence 1122 2221 2234445665566552 333 578999999999998877654
No 95
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.2e-61 Score=510.47 Aligned_cols=513 Identities=26% Similarity=0.354 Sum_probs=410.6
Q ss_pred CChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEE
Q 008636 14 LTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSS-FGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFN 92 (558)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~-~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (558)
.++.++|+.+++.+|+++|+.+.++++||.||.+++.++|.+|.+ .|+++|++|+++++|++++++++|||+++|++++
T Consensus 23 ~~l~~~l~~~a~~~p~~~a~~~~~~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 102 (560)
T PRK08974 23 QSLVDMFEQAVARYADQPAFINMGEVMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALFGILRAGMIVV 102 (560)
T ss_pred ccHHHHHHHHHHhCCCCceEEECCccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEe
Confidence 479999999999999999999999999999999999999999985 8999999999999999999999999999999999
Q ss_pred eccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCC-----------CCCCCC
Q 008636 93 TINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSS-----------PPPRIP 161 (558)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~ 161 (558)
|++|..+.+.+.++++.+++++++++.+....+.++..... ...+.............. ......
T Consensus 103 ~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (560)
T PRK08974 103 NVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFKTP----VKHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPKY 178 (560)
T ss_pred ccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhhcC----cceEEEecccccccccccccccchhhhcccccccc
Confidence 99999999999999999999999998776655554433211 122222111100000000 000000
Q ss_pred CCCchhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhccccc---ccCCCCEEEEecC
Q 008636 162 PADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDW---VVPKQSVLLWTLP 238 (558)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~---~~~~~~~~~~~~p 238 (558)
..+....+.+....+............+++++++|||||||.||+|.++|.++..+.......+ .....+.++..+|
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p 258 (560)
T PRK08974 179 HLPDAISFRSALHKGRRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLHPGKELVVTALP 258 (560)
T ss_pred cCCCcccHHHHhhccCCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccCCCccEEEEeCc
Confidence 0001112222222221111111224578999999999999999999999999876554332222 2344567888999
Q ss_pred chhhhhh-hHHHHHHHhcceEEEec-CCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc--cccCCCCceEEEEecCCCC
Q 008636 239 MFHNNGW-SFTWGAAVVGATNVCLR-KFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRPVRILTAGSPPP 314 (558)
Q Consensus 239 ~~~~~g~-~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~--~~~~~~~l~~v~~~g~~l~ 314 (558)
++|.+++ ...+.++..|+++++.. ..++..+++.++++++|.+.++|++++.+.+.. ....+++++.+++||++++
T Consensus 259 ~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~ 338 (560)
T PRK08974 259 LYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNNEEFQELDFSSLKLSVGGGMAVQ 338 (560)
T ss_pred HHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCcccCCccceeEEEecCccCC
Confidence 9998886 34566777888877654 567889999999999999999999999998765 2345678999999999999
Q ss_pred hhhhHHhhh-cCCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCee
Q 008636 315 APVLLRTES-LGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTR 393 (558)
Q Consensus 315 ~~~~~~~~~-~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~ 393 (558)
+.+.+.+.+ ++.++++.||+||++.++..+.... .....++|.|.+++ .++|+|+ ++..++.+ +.
T Consensus 339 ~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~----------~~~~~~~G~~~~~~-~~~i~~~-~~~~~~~g--~~ 404 (560)
T PRK08974 339 QAVAERWVKLTGQYLLEGYGLTECSPLVSVNPYDL----------DYYSGSIGLPVPST-EIKLVDD-DGNEVPPG--EP 404 (560)
T ss_pred HHHHHHHHHHhCCcEEeeecccccCceeeccCCCC----------cccCCccccCcCCC-EEEEECC-CCCCCCCC--Cc
Confidence 999998885 5899999999999998776654221 12245789999988 9999997 67888887 78
Q ss_pred eEEEEecccccccccCCchhhcccccCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeE
Q 008636 394 GEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAA 473 (558)
Q Consensus 394 Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~ 473 (558)
|||+++|+.++.||+++++.+...|.+|||+|||+++++++|.+++.||++|+|+.+|.+++|.+||+.|.++++|.+++
T Consensus 405 Gel~v~g~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~IE~~l~~~~~v~~~~ 484 (560)
T PRK08974 405 GELWVKGPQVMLGYWQRPEATDEVIKDGWLATGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMLHPKVLEVA 484 (560)
T ss_pred eEEEEecCCcchhhcCChhhhhhhhhcCCcccCCEEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHHhCCCeeEEE
Confidence 99999999999999999998888888999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHhh
Q 008636 474 VVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANS 550 (558)
Q Consensus 474 v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~ 550 (558)
|++.+++..++.++++++..+.. ...+++++++.++++++++|..++++++||+|++||++|+.|++.+.+
T Consensus 485 v~~~~~~~~g~~~~~~v~~~~~~------~~~~~l~~~l~~~l~~~~~P~~~~~~~~lP~t~~GK~~r~~l~~~~~~ 555 (560)
T PRK08974 485 AVGVPSEVSGEAVKIFVVKKDPS------LTEEELITHCRRHLTGYKVPKLVEFRDELPKSNVGKILRRELRDEARA 555 (560)
T ss_pred EEeeecCCcceEEEEEEECCCCC------CCHHHHHHHHHhhcccccCCcEEEEhhhCCCCCCCcEeHHHHHHHHHh
Confidence 99999988888888877654322 466789999999999999999999999999999999999999998654
No 96
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=4.5e-63 Score=504.01 Aligned_cols=430 Identities=18% Similarity=0.234 Sum_probs=359.1
Q ss_pred cccHHHHHHHHHHHHHHHHhCCC-CCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEEE
Q 008636 39 TYTWSQTYRRCLQLASSLSSFGI-NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFV 117 (558)
Q Consensus 39 ~~Ty~~l~~~v~~la~~L~~~Gv-~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 117 (558)
-+.|+||.+++.++|++|++.|+ ++|++|+++++|++++++++|||+++|++++|++|.++.+++.+++++++++++++
T Consensus 19 ~~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~ 98 (452)
T PRK07445 19 GYNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWG 98 (452)
T ss_pred ecChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEe
Confidence 47799999999999999999998 57999999999999999999999999999999999999999999999999999998
Q ss_pred eCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhHHHhhcCCCCCCCCCCCCCCCCceEEEcc
Q 008636 118 DHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYT 197 (558)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~T 197 (558)
+.+..... .. . . . . . .....++++++++||
T Consensus 99 ~~~~~~~~------------------~~-~--~----------------~-------~--~----~~~~~~~~~~~i~~T 128 (452)
T PRK07445 99 LDQLKLSH------------------PP-P--L----------------P-------S--Q----GILPNLETGWIMIPT 128 (452)
T ss_pred cCcccccc------------------CC-C--C----------------C-------c--c----ccCCCCCCcEEEEeC
Confidence 76432100 00 0 0 0 0 0 011345799999999
Q ss_pred CCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEecCCCHHHHHHHHHHhC
Q 008636 198 WGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHG 277 (558)
Q Consensus 198 SGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~ 277 (558)
|||||.||+|.+||+++..........+.+.+ ++.++.+|++|.+|+..++.+++.|+++++.+..+.........+++
T Consensus 129 SGTTG~PKgV~~t~~~l~~~~~~~~~~~~~~~-~~~~~~~Pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~~~~~ 207 (452)
T PRK07445 129 GGSSGQIRFAIHTWETLTASVQGFQRYFQLQQ-VNSFCVLPLYHVSGLMQFMRSFLTGGKLVILPYKRLKSGQELPPNPS 207 (452)
T ss_pred CCCCCCCcEEEechHHHHHHHHHHHHHhcCCC-CceEeccCchhhhhHHHHHHHHHcCCeEEEcChHhccchhhhhhhcC
Confidence 99999999999999998776666555555544 46788999999999988889999999999886432222233445788
Q ss_pred CcEEEehHHHHHHHhcCccccCCCCceEEEEecCCCChhhhHHhhhcCCeeeecccCCCCCCcccccCCCCCCCCCChhh
Q 008636 278 VTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357 (558)
Q Consensus 278 ~t~l~~~p~~l~~l~~~~~~~~~~~l~~v~~~g~~l~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~ 357 (558)
+|++.++|++++.+.+.. ...++++|.+++||+++++.+.+.+...++++++.||+||++........ ..
T Consensus 208 ~t~~~~vP~~l~~l~~~~-~~~l~~l~~i~~gG~~l~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~---------~~ 277 (452)
T PRK07445 208 DFFLSLVPTQLQRLLQLR-PQWLAQFRTILLGGAPAWPSLLEQARQLQLRLAPTYGMTETASQIATLKP---------DD 277 (452)
T ss_pred ceEEEehHHHHHHHHhhC-hhhhhcceEEEECCccCCHHHHHHHHhcCCeEecCcchhhhcccccccCc---------hh
Confidence 999999999999998632 34477999999999999999999888779999999999998765443211 11
Q ss_pred hhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecccccccccCCchhhcccccCCceeeCceeEEccCCcE
Q 008636 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYL 437 (558)
Q Consensus 358 ~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l 437 (558)
......++|.|.++. +++|++ + +.|||+++|++++.||++++.. .+|||+|||+|++|+||++
T Consensus 278 ~~~~~~~~G~~~p~~-~v~i~~---------g--~~Gel~v~g~~~~~gY~~~~~~-----~~g~~~TGDl~~~d~dG~l 340 (452)
T PRK07445 278 FLAGNNSSGQVLPHA-QITIPA---------N--QTGNITIQAQSLALGYYPQILD-----SQGIFETDDLGYLDAQGYL 340 (452)
T ss_pred hccCCCcCCccCCCC-eEEEcC---------C--CcceEEEeCCccchhhcCCccC-----CCCEEECCCEEEEcCCCCE
Confidence 112235789999988 888872 2 5699999999999999986431 3789999999999999999
Q ss_pred EEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCC
Q 008636 438 EIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIP 517 (558)
Q Consensus 438 ~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~ 517 (558)
++.||.||+|+.+|++|+|.+||+.|.++|+|.+++|++.+++..|+.++++++..++. .+.++++++++++|+
T Consensus 341 ~~~GR~dd~I~~~G~~V~p~eIE~~l~~~p~V~~a~V~g~~~~~~g~~~~a~vv~~~~~------~~~~~l~~~~~~~L~ 414 (452)
T PRK07445 341 HILGRNSQKIITGGENVYPAEVEAAILATGLVQDVCVLGLPDPHWGEVVTAIYVPKDPS------ISLEELKTAIKDQLS 414 (452)
T ss_pred EEEeecCCEEEECCEEECHHHHHHHHHhCCCcceEEEEeccCcCCCcEEEEEEEeCCCC------CCHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999998899999999876552 567899999999999
Q ss_pred CccccCeEEEecccCCCCCCcchhHHHHHHHhhcc
Q 008636 518 RYMVPKTVVFIDELPKTATGKVQKYVLGDIANSMS 552 (558)
Q Consensus 518 ~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~~~ 552 (558)
++++|+.++++++||+|++||++|++|++++++..
T Consensus 415 ~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~ 449 (452)
T PRK07445 415 PFKQPKHWIPVPQLPRNPQGKINRQQLQQIAVQRL 449 (452)
T ss_pred cccCCeEEEEecCCCCCCCcccCHHHHHHHHHHhh
Confidence 99999999999999999999999999999988754
No 97
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-61 Score=509.35 Aligned_cols=502 Identities=25% Similarity=0.328 Sum_probs=405.9
Q ss_pred CCChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEE
Q 008636 13 PLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFN 92 (558)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (558)
+.|+.++|+++++++|+++|+.+.++.+||+||.++++++|++|.+.|+++||+|+++++|++++++++|||+++|++++
T Consensus 2 ~~~l~~~~~~~a~~~p~~~a~~~~~~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~~~~~a~~~~G~~~v 81 (533)
T PRK07798 2 AWNIADLFEAVADAVPDRVALVCGDRRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAMLGAFKARAVPV 81 (533)
T ss_pred cccHHHHHHHHHHhCCCceEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCeEEE
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhHHHh
Q 008636 93 TINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENM 172 (558)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (558)
++++..+.+++.++++.+++++++++.+....+.+...... ....++.+....... .......+.++
T Consensus 82 ~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~----------~~~~~~~~~~~ 148 (533)
T PRK07798 82 NVNYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVLPRLP---KLRTLVVVEDGSGND----------LLPGAVDYEDA 148 (533)
T ss_pred ecCcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHhccCC---CccEEEEecCCcccc----------cCCccccHHHH
Confidence 99999999999999999999999999877666665533221 223344443221100 00012345555
Q ss_pred hcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccc---------ccc------CCCCEEEEec
Q 008636 173 LAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLID---------WVV------PKQSVLLWTL 237 (558)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~---------~~~------~~~~~~~~~~ 237 (558)
.......... .....+.++++|||||||.||+|+++|+++.......... +.+ ..+++++...
T Consensus 149 ~~~~~~~~~~--~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (533)
T PRK07798 149 LAAGSPERDF--GERSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPAP 226 (533)
T ss_pred HhccCCcCCC--CCCCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEec
Confidence 5433221111 1223355799999999999999999999986544332111 111 5668899999
Q ss_pred CchhhhhhhHHHHHHHhcceEEEec--CCCHHHHHHHHHHhCCcEEEehHHHHHH-HhcCc---cccCCCCceEEEEecC
Q 008636 238 PMFHNNGWSFTWGAAVVGATNVCLR--KFDAPTVFALIRKHGVTHMCGAPIVLNL-LSSSP---EAKQLDRPVRILTAGS 311 (558)
Q Consensus 238 p~~~~~g~~~~~~~l~~g~~~~~~~--~~~~~~~~~~i~~~~~t~l~~~p~~l~~-l~~~~---~~~~~~~l~~v~~~g~ 311 (558)
|++|..++..++.+++.|+++++.+ .+++..+++.++++++|.+.++|..+.. +.+.. ....+++++.+++||+
T Consensus 227 pl~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~i~~gG~ 306 (533)
T PRK07798 227 PLMHGAGQWAAFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALEARGPYDLSSLFAIASGGA 306 (533)
T ss_pred chhhhhhHHHHHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhcccccCCCCceEEEEECCC
Confidence 9999999988999999999999998 7899999999999999999999865532 33221 2345679999999999
Q ss_pred CCChhhhHHhhh-c-CCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCC--ceecccceeeEeCCCCCcccC
Q 008636 312 PPPAPVLLRTES-L-GFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG--VRTIGLTEVDIVDPETGLSVK 387 (558)
Q Consensus 312 ~l~~~~~~~~~~-~-~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~~i~d~~~~~~~~ 387 (558)
++++.+..++.+ + +..+++.||+||++.+........ ....| .+.++. .++|+|+ ++.+++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~-------------~~~~g~~~~~~~~-~~~i~~~-~~~~~~ 371 (533)
T PRK07798 307 LFSPSVKEALLELLPNVVLTDSIGSSETGFGGSGTVAKG-------------AVHTGGPRFTIGP-RTVVLDE-DGNPVE 371 (533)
T ss_pred CCCHHHHHHHHHHcCCCeEEeeecccccccccccCCCCC-------------CccCCCCccCCCc-eEEEECC-CCCCCC
Confidence 999999999884 4 789999999999976655432110 01222 455565 8999997 566888
Q ss_pred CCCCeeeEEEEecccccccccCCchhhccccc----CCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHH
Q 008636 388 RDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK----DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVL 463 (558)
Q Consensus 388 ~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~----~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l 463 (558)
.+....|+++ .++.++.||++++..+...|. ++||+|||+++++++|.+++.||++|+|+.+|.+|++.+||+.|
T Consensus 372 ~g~~~~g~l~-~~~~~~~gy~~~~~~t~~~f~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~~~i~~~G~~v~~~eIE~~l 450 (533)
T PRK07798 372 PGSGEIGWIA-RRGHIPLGYYKDPEKTAETFPTIDGVRYAIPGDRARVEADGTITLLGRGSVCINTGGEKVFPEEVEEAL 450 (533)
T ss_pred CCCCCeeEEE-eecCccccccCChhhhHHhhccCCCCceEEcCcEEEEcCCCcEEEEccccceEecCCEEeCHHHHHHHH
Confidence 7743336666 456799999999988887773 35999999999999999999999999999999999999999999
Q ss_pred hcCCCcceeEEEeeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHH
Q 008636 464 YSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYV 543 (558)
Q Consensus 464 ~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~ 543 (558)
.++++|.+++|++.++...++.+++++++.++.. .+.++++++++++|+.+++|..++++++||+|++||++|+.
T Consensus 451 ~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~-----~~~~~l~~~l~~~l~~~~~P~~i~~~~~iP~t~~GK~~~~~ 525 (533)
T PRK07798 451 KAHPDVADALVVGVPDERWGQEVVAVVQLREGAR-----PDLAELRAHCRSSLAGYKVPRAIWFVDEVQRSPAGKADYRW 525 (533)
T ss_pred HhCccceeEEEEeccCcccCceEEEEEEECCCCC-----CCHHHHHHHHhhhcccCCCCeEEEEcccCCCCCcchhhHHH
Confidence 9999999999999988888888999988876544 57899999999999999999999999999999999999999
Q ss_pred HHHHHhh
Q 008636 544 LGDIANS 550 (558)
Q Consensus 544 l~~~~~~ 550 (558)
|+++.++
T Consensus 526 ~~~~~~~ 532 (533)
T PRK07798 526 AKEQAAE 532 (533)
T ss_pred Hhhhhcc
Confidence 9999864
No 98
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=2.8e-62 Score=509.96 Aligned_cols=491 Identities=22% Similarity=0.271 Sum_probs=409.5
Q ss_pred CChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEe
Q 008636 14 LTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNT 93 (558)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 93 (558)
|++.++|++++..+|+++|+...++.+||+||.+.+.++|.+|.++|+++|++|+++++|+.++++++|||+++|+++++
T Consensus 2 ~~~~~~l~~~a~~~p~~~~~~~~~~~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~~~~~~a~~~~G~~~~~ 81 (503)
T PRK04813 2 MDIIETIEEFAQTQPDFPAYDYLGEKLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEMLATFLGAVKAGHAYIP 81 (503)
T ss_pred chHHHHHHHHHHhCCCceEEEeCCcEEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEec
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhHHHhh
Q 008636 94 INTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENML 173 (558)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (558)
+++..+.+.+..+++..++++++++.+.... . .....+.. ..+.+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~---~~~~~~~~----------------------~~~~~~~ 128 (503)
T PRK04813 82 VDVSSPAERIEMIIEVAKPSLIIATEELPLE--------I---LGIPVITL----------------------DELKDIF 128 (503)
T ss_pred CCCCChHHHHHHHHHhcCCCEEEeccccccc--------c---cCCcEEeh----------------------HHhhhhh
Confidence 9999999999999999999999998754100 0 00011100 0111111
Q ss_pred cCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhhhHHHHHHH
Q 008636 174 AKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAV 253 (558)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~ 253 (558)
.. ...........++++++++|||||||.||+|.++|+++.....+....+.+..+++++...|++|..++..++.++.
T Consensus 129 ~~-~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~ 207 (503)
T PRK04813 129 AT-GNPYDFDHAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSFTNWMLEDFALPEGPQFLNQAPYSFDLSVMDLYPTLA 207 (503)
T ss_pred hc-cccccccccCCCCCcEEEEECCCCCCCCcEEEeehHHHHHHHHHHHHHcCCCcCceeeecCCcchhHhHHHHHHHHh
Confidence 10 01111122356788999999999999999999999999888877777788889999999999999988888889999
Q ss_pred hcceEEEecC---CCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc--cccCCCCceEEEEecCCCChhhhHHhhh-c-CC
Q 008636 254 VGATNVCLRK---FDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRPVRILTAGSPPPAPVLLRTES-L-GF 326 (558)
Q Consensus 254 ~g~~~~~~~~---~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~--~~~~~~~l~~v~~~g~~l~~~~~~~~~~-~-~~ 326 (558)
.|+++++.+. .++..+++.++++++|++.++|++++.+.... ....+++++.++++|+++++.+.+.+.+ + +.
T Consensus 208 ~g~~~v~~~~~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~ 287 (503)
T PRK04813 208 SGGTLVALPKDMTANFKQLFETLPQLPINVWVSTPSFADMCLLDPSFNEEHLPNLTHFLFCGEELPHKTAKKLLERFPSA 287 (503)
T ss_pred cCCEEEEcChhhhcCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhccCcccCCCceEEEEecCcCCHHHHHHHHHHCCCc
Confidence 9999998875 57899999999999999999999998876543 4456789999999999999999999884 4 78
Q ss_pred eeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEeccccccc
Q 008636 327 IVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLG 406 (558)
Q Consensus 327 ~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~g 406 (558)
.+++.||+||++.........+.. .......++|.+.++. +++|+|+ ++..++.+ +.|||+++|++++.|
T Consensus 288 ~~~~~yG~tE~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~g 357 (503)
T PRK04813 288 TIYNTYGPTEATVAVTSIEITDEM------LDQYKRLPIGYAKPDS-PLLIIDE-EGTKLPDG--EQGEIVISGPSVSKG 357 (503)
T ss_pred eEEeCcccchheeEEEEEEecccc------cccCCCCcccccCCCC-EEEEECC-CCCCCCCC--CceEEEEeccccccc
Confidence 999999999997655443222111 0112234688899998 9999996 77888877 789999999999999
Q ss_pred ccCCchhhccccc--C--CceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCCCC
Q 008636 407 YLKDPEATSKCMK--D--GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482 (558)
Q Consensus 407 y~~~~~~~~~~~~--~--g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~ 482 (558)
|+++++.+...|. + +||+|||+|++ ++|.+++.||.+|+|+.+|.++++.+||+.+.++|+|.+++|++.+++..
T Consensus 358 y~~~~~~~~~~~~~~~g~~~~~tGD~~~~-~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~ 436 (503)
T PRK04813 358 YLNNPEKTAEAFFTFDGQPAYHTGDAGYL-EDGLLFYQGRIDFQIKLNGYRIELEEIEQNLRQSSYVESAVVVPYNKDHK 436 (503)
T ss_pred cCCChhHhHHhhccCCCceeEECCceEEe-eCCeEEEeccccceEEECcEEeCHHHHHHHHHhCCCcceEEEEEeeCCCC
Confidence 9999988887762 3 49999999999 89999999999999999999999999999999999999999999887777
Q ss_pred CceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHhh
Q 008636 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANS 550 (558)
Q Consensus 483 ~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~ 550 (558)
++.+++++++.++.... .....+++++++.++++.+.+|+.++++++||+|++||++|++|++.+++
T Consensus 437 ~~~~~~~v~~~~~~~~~-~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~gKv~r~~l~~~~~~ 503 (503)
T PRK04813 437 VQYLIAYVVPKEEDFER-EFELTKAIKKELKERLMEYMIPRKFIYRDSLPLTPNGKIDRKALIEEVNK 503 (503)
T ss_pred ccEEEEEEEeccccccc-cchhHHHHHHHHHhhCccccCCeEEEEeccCCCCCCCCCcHHHHHHHhcC
Confidence 78899988877642211 11234679999999999999999999999999999999999999998763
No 99
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1e-62 Score=527.60 Aligned_cols=514 Identities=20% Similarity=0.241 Sum_probs=387.3
Q ss_pred CCCChhhHHHHHhhcCCCCceEEEC---------------------------CccccHHHHHHHHHHHHHHHHhCCCCCC
Q 008636 12 CPLTPLGFIERAATACDDCPSIIYN---------------------------DTTYTWSQTYRRCLQLASSLSSFGINPG 64 (558)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~---------------------------~~~~Ty~~l~~~v~~la~~L~~~Gv~~g 64 (558)
...|+.++|.++++.+|+++|+.+. .+++||+||.+++.++|++|.++|+++|
T Consensus 67 ~~~t~~~~~~~~~~~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~~Gv~~g 146 (700)
T PTZ00216 67 YGPNFLQRLERICKERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAELGLTKG 146 (700)
T ss_pred CCCCHHHHHHHHHHhCCCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHHhCCCCC
Confidence 3468999999999999999999873 3689999999999999999999999999
Q ss_pred CEEEEEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEE
Q 008636 65 HVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLI 144 (558)
Q Consensus 65 d~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (558)
|+|+|+++|+++|++++|||+++|++++|+++.++.+++.+++++++++++|++.+....+......... ....++.+
T Consensus 147 d~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~--~~~~ii~~ 224 (700)
T PTZ00216 147 SNVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNVPNLLRLMKSGGM--PNTTIIYL 224 (700)
T ss_pred CEEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHHHHHHHhhhhccC--CceEEEEE
Confidence 9999999999999999999999999999999999999999999999999999987655444443322110 11234443
Q ss_pred cCCccccCCCCCCCCCCCCCchhhHHHhhcCCC---CCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhc
Q 008636 145 TDDKEISSSSSPPPRIPPADFVDTYENMLAKGD---PQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDS 221 (558)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~ 221 (558)
+..... .. ........|.++...+. .......+..++++++|+|||||||.||||++||+++.......
T Consensus 225 ~~~~~~-------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~~ 296 (700)
T PTZ00216 225 DSLPAS-------VD-TEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILAL 296 (700)
T ss_pred CCCccc-------cc-cCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHHH
Confidence 321100 00 00111345666655441 11111233467899999999999999999999999998766554
Q ss_pred cccc-----ccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEecCCCHHHHHH-------HHHHhCCcEEEehHHHHH
Q 008636 222 LIDW-----VVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFA-------LIRKHGVTHMCGAPIVLN 289 (558)
Q Consensus 222 ~~~~-----~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~-------~i~~~~~t~l~~~p~~l~ 289 (558)
...+ ...+++++++.+|++|..++......+..|+++++. ++..+.+ .+++++||++.++|.+++
T Consensus 297 ~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~v~~~---~~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~~ 373 (700)
T PTZ00216 297 EDRLNDLIGPPEEDETYCSYLPLAHIMEFGVTNIFLARGALIGFG---SPRTLTDTFARPHGDLTEFRPVFLIGVPRIFD 373 (700)
T ss_pred HhhcccccCCCCCCCEEEEEChHHHHHHHHHHHHHHHcCCEEEEC---CHHHhhhhhccccchHHHcCCcEEEechHHHH
Confidence 4332 236789999999999998876655666777766553 4555554 688999999999999998
Q ss_pred HHhcCcc-------------------------------------------ccCCCCceEEEEecCCCChhhhHHhhh-cC
Q 008636 290 LLSSSPE-------------------------------------------AKQLDRPVRILTAGSPPPAPVLLRTES-LG 325 (558)
Q Consensus 290 ~l~~~~~-------------------------------------------~~~~~~l~~v~~~g~~l~~~~~~~~~~-~~ 325 (558)
.+.+... ....+++|.+++||+++++++.+.++. ++
T Consensus 374 ~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~~~ 453 (700)
T PTZ00216 374 TIKKAVEAKLPPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVVFG 453 (700)
T ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHhh
Confidence 8764210 000157999999999999999887774 46
Q ss_pred CeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCc-ccCCCCCeeeEEEEeccccc
Q 008636 326 FIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGL-SVKRDGQTRGEIVMRGGSLM 404 (558)
Q Consensus 326 ~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~-~~~~~~~~~Gel~v~~~~~~ 404 (558)
++++.||+||+++.++..... ....+++|.|.+++ +++|+|.++.. ...++ ..|||+|+|++++
T Consensus 454 -~l~~~YG~TEt~~~~~~~~~~-----------~~~~~svG~p~~g~-evkI~d~~~~~~~~~~~--~~GEL~vrG~~v~ 518 (700)
T PTZ00216 454 -MVIQGWGLTETVCCGGIQRTG-----------DLEPNAVGQLLKGV-EMKLLDTEEYKHTDTPE--PRGEILLRGPFLF 518 (700)
T ss_pred -hHhhccCcccccccccccCCC-----------CCCCCCcCCcCCCe-EEEEeechhhccCCCCC--CCceEEEcCCccc
Confidence 999999999998665432210 12346899999999 99999974322 22233 5699999999999
Q ss_pred ccccCCchhhcccc-cCCceeeCceeEEccCCcEEEecccCCeee-eCceeechHHHHHHHhcCCCccee--EEEeeeCC
Q 008636 405 LGYLKDPEATSKCM-KDGRYYTGDVGMMHPDGYLEIKDRSKDVII-SGGENISSTEIESVLYSHPMVNEA--AVVGRPDP 480 (558)
Q Consensus 405 ~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~-~~G~~v~~~~iE~~l~~~~~v~~~--~v~~~~~~ 480 (558)
.|||++|+.+.+.| .+|||+|||+|++++||.+++.||+||+|| .+|++|.|.+||+.+.++|.|.++ +|++.++
T Consensus 519 ~GY~~~pe~T~~~f~~dGw~~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~l~~~p~V~~~~~~v~~~~~- 597 (700)
T PTZ00216 519 KGYYKQEELTREVLDEDGWFHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEALEALYGQNELVVPNGVCVLVHPA- 597 (700)
T ss_pred chhcCChhHhhhhccccCCeeccceEEEcCCCcEEEEEehHhheecCCCceeccHHHHHHHhcCcCcccceEEEEEecC-
Confidence 99999999999988 589999999999999999999999999999 899999999999999999999973 4444432
Q ss_pred CCCceeEEEEEecCCCC-----CCC------CCCC----HHHHHHHH-----HhcCCCccccCeEEEecc------cCCC
Q 008636 481 FWQEIPCAFVSLKTGTD-----SGG------MMTT----EKDIIQYC-----RARIPRYMVPKTVVFIDE------LPKT 534 (558)
Q Consensus 481 ~~~~~~~~~v~~~~~~~-----~~~------~~~~----~~~l~~~~-----~~~l~~~~~p~~i~~v~~------~P~t 534 (558)
...++++|++..... ..+ .... .+.+.+.+ ++.+..+..++.|+++.+ --+|
T Consensus 598 --~~~l~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~~~~~~f~~~~g~lT 675 (700)
T PTZ00216 598 --RSYICALVLTDEAKAMAFAKEHGIEGEYPAILKDPEFQKKATESLQETARAAGRKSFEIVRHVRVLSDEWTPENGVLT 675 (700)
T ss_pred --CceEEEEEecCHHHHHHHHHHcCCCCCHHHHhcCHHHHHHHHHHHHHHHHhcCCCCceeEeEEEEECCCCCCCCCCCC
Confidence 346888887653210 000 0001 11222222 235888889999988742 2369
Q ss_pred CCCcchhHHHHHHHhhcccccC
Q 008636 535 ATGKVQKYVLGDIANSMSMSHS 556 (558)
Q Consensus 535 ~~GK~~r~~l~~~~~~~~~~~~ 556 (558)
+++|+.|..+++.|++.+..-|
T Consensus 676 ~t~K~~R~~i~~~y~~~i~~ly 697 (700)
T PTZ00216 676 AAMKLKRRVIDERYADLIKELF 697 (700)
T ss_pred hhhccchHHHHHHHHHHHHHHh
Confidence 9999999999999998776543
No 100
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.7e-61 Score=503.78 Aligned_cols=492 Identities=27% Similarity=0.372 Sum_probs=399.9
Q ss_pred ceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHHHHHhhc
Q 008636 31 PSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHS 110 (558)
Q Consensus 31 ~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~ 110 (558)
.|+...++.+||.||.++++++|++|.+.|+++|++|+++++|++++++++|||+++|++++++++..+.+++..+++.+
T Consensus 3 ~~~~~~~~~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~ 82 (509)
T PRK12406 3 ATIISGDRRRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDS 82 (509)
T ss_pred eEEEECCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHHhcc
Confidence 46777889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCC-CCCCCchhhHHHhhcCCCCCCCCCCCCCCC
Q 008636 111 ESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPR-IPPADFVDTYENMLAKGDPQFSWVRPKSDL 189 (558)
Q Consensus 111 ~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (558)
++++++++......+.+.... ...++................. .........+.+....... ......+
T Consensus 83 ~~~~i~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 152 (509)
T PRK12406 83 GARVLIAHADLLHGLASALPA------GVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQEP----YDGPPVP 152 (509)
T ss_pred CCcEEEEccchhhhhhhhhhc------ccceeecccccccccccccccccccCCCCccCHHHHhcccCc----cCCCCCC
Confidence 999999987765544333211 1111111111100000000000 0001112344444332211 1224567
Q ss_pred CceEEEccCCCCCCCceeeecHHHH---HHHHHhcccccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEecCCCH
Q 008636 190 DPMVLNYTWGTTSAPKGVVQCYKAF---FIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDA 266 (558)
Q Consensus 190 ~~~~i~~TSGtTG~pk~v~~t~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~~~~ 266 (558)
++++++|||||||.||+|.++|.+. ..........+++.++++++...|++|..+....+.++..|+++++.+..++
T Consensus 153 ~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 232 (509)
T PRK12406 153 QPQSMIYTSGTTGHPKGVRRAAPTPEQAAAAEQMRALIYGLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQPRFDP 232 (509)
T ss_pred CceEEEECCCCCCCCceEEEechhHHHHHHHHHhhhhhcCCCCCceEEEEeCCcccchHHHHHHHHhhheEEEEccCCCH
Confidence 9999999999999999999866543 3333334456678899999999999998887777778889999999888899
Q ss_pred HHHHHHHHHhCCcEEEehHHHHHHHhcCc----cccCCCCceEEEEecCCCChhhhHHhhh-cCCeeeecccCCCCCCcc
Q 008636 267 PTVFALIRKHGVTHMCGAPIVLNLLSSSP----EAKQLDRPVRILTAGSPPPAPVLLRTES-LGFIVSHGYGKTEIAGVN 341 (558)
Q Consensus 267 ~~~~~~i~~~~~t~l~~~p~~l~~l~~~~----~~~~~~~l~~v~~~g~~l~~~~~~~~~~-~~~~v~~~YG~tE~g~~~ 341 (558)
..+++.++++++|++.++|++++.|++.. ....+++++.+++||++++++++.++.+ ++..+++.||+||++.++
T Consensus 233 ~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~ 312 (509)
T PRK12406 233 EELLQLIERHRITHMHMVPTMFIRLLKLPEEVRAKYDVSSLRHVIHAAAPCPADVKRAMIEWWGPVIYEYYGSTESGAVT 312 (509)
T ss_pred HHHHHHHHHcCCeEEEccHHHHHHHHhCchhhcccCCCCceeEEEEcCCCCCHHHHHHHHHHcCCcEEeeccccccCceE
Confidence 99999999999999999999999998754 2334679999999999999999999985 588999999999999876
Q ss_pred cccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecccccc-cccCCchhhcccccC
Q 008636 342 VSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLML-GYLKDPEATSKCMKD 420 (558)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~-gy~~~~~~~~~~~~~ 420 (558)
+.+... .....+++|.+.++. .++++|+ ++++++.+ +.|||++++++++. +|+++++.+...+.+
T Consensus 313 ~~~~~~----------~~~~~~~~G~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~~~y~~~~~~~~~~~~~ 378 (509)
T PRK12406 313 FATSED----------ALSHPGTVGKAAPGA-ELRFVDE-DGRPLPQG--EIGEIYSRIAGNPDFTYHNKPEKRAEIDRG 378 (509)
T ss_pred ecCccc----------ccccCCCcCccCCCc-EEEEECC-CCCCCCCC--CceEEEEECCccccccccCCchhcccccCC
Confidence 543211 112335789999988 9999997 67888877 78999999998875 999999888888889
Q ss_pred CceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCCCCCceeEEEEEecCCCCCCC
Q 008636 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGG 500 (558)
Q Consensus 421 g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~ 500 (558)
|||+|||+++++++|.+++.||.+|+||.+|.+|++.+||+.|.++++|.++++++.++...++.+++++++.++..
T Consensus 379 ~~~~TGD~~~~~~~g~~~~~GR~~d~ik~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~--- 455 (509)
T PRK12406 379 GFITSGDVGYLDADGYLFLCDRKRDMVISGGVNIYPAEIEAVLHAVPGVHDCAVFGIPDAEFGEALMAVVEPQPGAT--- 455 (509)
T ss_pred CCeEEccEEEEcCCceEEEeecccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeeeccccCceeEEEEEECCCCC---
Confidence 99999999999999999999999999999999999999999999999999999999998888888999998876543
Q ss_pred CCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHhhc
Q 008636 501 MMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSM 551 (558)
Q Consensus 501 ~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~~ 551 (558)
...+++++.+++.++++++|..+++++++|+|++||++|++|++.+...
T Consensus 456 --~~~~~l~~~l~~~l~~~~~P~~i~~~~~iP~t~~GK~~r~~L~~~~~~~ 504 (509)
T PRK12406 456 --LDEADIRAQLKARLAGYKVPKHIEIMAELPREDSGKIFKRRLRDPYWAN 504 (509)
T ss_pred --CCHHHHHHHHHHhcccCCCCcEEEEeccCCCCCccchhHHHHHHHHHhh
Confidence 5778999999999999999999999999999999999999999987654
No 101
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=9.8e-63 Score=608.94 Aligned_cols=495 Identities=19% Similarity=0.201 Sum_probs=416.1
Q ss_pred CCCChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEE
Q 008636 12 CPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIF 91 (558)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 91 (558)
...++.++|++++.++|+++|+++.+..+||+||.++++++|+.|.+.|+++|++|+|++++++++++++||++++|+++
T Consensus 3718 ~~~~~~~~~~~~~~~~p~~~Av~~~~~~~tY~eL~~~~~~la~~L~~~gv~~~~~V~v~~~~s~~~~v~~lavlkaG~a~ 3797 (4334)
T PRK05691 3718 LEQSYVRLFEAQVAAHPQRIAASCLDQQWSYAELNRAANRLGHALRAAGVGVDQPVALLAERGLDLLGMIVGSFKAGAGY 3797 (4334)
T ss_pred cccCHHHHHHHHHHhCCCceEEEcCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEE
Confidence 45699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhHHH
Q 008636 92 NTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYEN 171 (558)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (558)
+|++|.++.+++..+++.++++++|++................. ....++.... ..
T Consensus 3798 vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~---------------------- 3853 (4334)
T PRK05691 3798 LPLDPGLPAQRLQRIIELSRTPVLVCSAACREQARALLDELGCA-NRPRLLVWEE-VQ---------------------- 3853 (4334)
T ss_pred eCCCCCChHHHHHHHHHhcCCCEEEecCcccchhhhhhcccccc-cccceeeecc-cc----------------------
Confidence 99999999999999999999999999887655443333222110 0111211111 00
Q ss_pred hhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhhhHHHHH
Q 008636 172 MLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGA 251 (558)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~ 251 (558)
..............++++++|+|||||||.||||+++|+++.+...+....+++++.++++...++++..++..++.+
T Consensus 3854 --~~~~~~~~~~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~s~~fd~s~~~~~~~ 3931 (4334)
T PRK05691 3854 --AGEVASHNPGIYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYLALSEADVIAQTASQSFDISVWQFLAA 3931 (4334)
T ss_pred --cccccccCCCCCCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHHhcCCCccceEEEecCCchhHHHHHHHHH
Confidence 000001111123567899999999999999999999999999988888888899999999999999999999999999
Q ss_pred HHhcceEEEecC---CCHHHHHHHHHHhCCcEEEehHHHHHHHhcCccccCCCCceEEEEecCCCChhhhHHhhhc--CC
Q 008636 252 AVVGATNVCLRK---FDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAGSPPPAPVLLRTESL--GF 326 (558)
Q Consensus 252 l~~g~~~~~~~~---~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~~l~~v~~~g~~l~~~~~~~~~~~--~~ 326 (558)
++.|+++++.+. .++..+++.++++++|++.++|+++..++... ...++++|.+++|||++++++.+.|.+. ++
T Consensus 3932 l~~G~~l~i~~~~~~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~-~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~ 4010 (4334)
T PRK05691 3932 PLFGARVEIVPNAIAHDPQGLLAHVQAQGITVLESVPSLIQGMLAED-RQALDGLRWMLPTGEAMPPELARQWLQRYPQI 4010 (4334)
T ss_pred HhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhc-cccCCCceEEEecCCcCCHHHHHHHHHhCCCC
Confidence 999999999874 57899999999999999999999999887542 3457789999999999999999998743 78
Q ss_pred eeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEeccccccc
Q 008636 327 IVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLG 406 (558)
Q Consensus 327 ~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~g 406 (558)
+++|.||+|||+..+........ ........+|.|.++. .+.|+|. .++.++.| ..|||+|+|+++++|
T Consensus 4011 ~l~n~YG~TE~t~~~~~~~~~~~-------~~~~~~~~iG~p~~~~-~~~v~d~-~~~~~p~g--~~GEL~i~G~~v~~G 4079 (4334)
T PRK05691 4011 GLVNAYGPAECSDDVAFFRVDLA-------STRGSYLPIGSPTDNN-RLYLLDE-ALELVPLG--AVGELCVAGTGVGRG 4079 (4334)
T ss_pred eEEeCccCccceeEEEEEEcccc-------cccCCcCCCCCccCCC-EEEEECC-CCCCCCCC--CceEEEEeccccccc
Confidence 99999999999876654332111 1111234689999998 9999996 78888888 889999999999999
Q ss_pred ccCCchhhccccc--------CCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeee
Q 008636 407 YLKDPEATSKCMK--------DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478 (558)
Q Consensus 407 y~~~~~~~~~~~~--------~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~ 478 (558)
|+++|+.+...|. ++||+|||+|++++||.++++||+|++||++|.+|.+.+||+.|.++|+|.+++|+...
T Consensus 4080 Y~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~riel~eIE~~l~~~~~v~~a~v~~~~ 4159 (4334)
T PRK05691 4080 YVGDPLRTALAFVPHPFGAPGERLYRTGDLARRRSDGVLEYVGRIDHQVKIRGYRIELGEIEARLHEQAEVREAAVAVQE 4159 (4334)
T ss_pred ccCCcccchhhcccCCCCCCCceeeccCcceeecCCCcEEEecccCCcEEeceEEecHHHHHHHHHhCCCccEEEEEEec
Confidence 9999999998882 46999999999999999999999999999999999999999999999999998887654
Q ss_pred CCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHH
Q 008636 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDI 547 (558)
Q Consensus 479 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~ 547 (558)
...+..++++++...+.... ....++++++++++||.|++|..++.+++||+|++||+||++|++.
T Consensus 4160 -~~~~~~l~a~~~~~~~~~~~--~~~~~~l~~~l~~~Lp~ymvP~~~~~~~~lP~t~~GKidr~~L~~~ 4225 (4334)
T PRK05691 4160 -GVNGKHLVGYLVPHQTVLAQ--GALLERIKQRLRAELPDYMVPLHWLWLDRLPLNANGKLDRKALPAL 4225 (4334)
T ss_pred -CCCCcEEEEEEeCCcccccc--hHHHHHHHHHHHhhCChhhcCcceeecccCCCCCCCcccHhhcCCC
Confidence 34567899999876553211 0245779999999999999999999999999999999999999875
No 102
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=8e-63 Score=609.73 Aligned_cols=493 Identities=19% Similarity=0.248 Sum_probs=419.9
Q ss_pred CCCCCCCCCCCCChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHH
Q 008636 3 RLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHF 82 (558)
Q Consensus 3 ~~~~~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~l 82 (558)
+|...+......++.++|+++++.+|+++|+.+.++.+||+||.+++.++|+.|.++|+++|++|+|++++++++++++|
T Consensus 1120 ~~~~~~~~~~~~~l~~~~~~~a~~~p~~~Al~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~s~~~iv~~l 1199 (4334)
T PRK05691 1120 QWGQAPCAPAQAWLPELLNEQARQTPERIALVWDGGSLDYAELHAQANRLAHYLRDKGVGPDVCVAIAAERSPQLLVGLL 1199 (4334)
T ss_pred hccCCCCCCccCCHHHHHHHHHHhCCCCeEEEECCceEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHH
Confidence 35556666677899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCcEEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCC
Q 008636 83 AVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPP 162 (558)
Q Consensus 83 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (558)
|++++|++++|++|.++.+++..++++++++++|++.+....+... . ....+...... .
T Consensus 1200 ailkaG~~~vpld~~~p~~rl~~il~~~~~~~vi~~~~~~~~~~~~----~----~~~~~~~~~~~-~------------ 1258 (4334)
T PRK05691 1200 AILKAGGAYVPLDPDYPAERLAYMLADSGVELLLTQSHLLERLPQA----E----GVSAIALDSLH-L------------ 1258 (4334)
T ss_pred HHHHhCCEEEecCcCChHHHHHHHHHhcCCCEEEecchhhhhcccc----c----CceEEeecccc-c------------
Confidence 9999999999999999999999999999999999987644322110 0 01111111100 0
Q ss_pred CCchhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhh
Q 008636 163 ADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242 (558)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 242 (558)
.............++++++++|||||||.||||.++|+++.....+....+++++++++++..|++|.
T Consensus 1259 ------------~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd 1326 (4334)
T PRK05691 1259 ------------DSWPSQAPGLHLHGDNLAYVIYTSGSTGQPKGVGNTHAALAERLQWMQATYALDDSDVLMQKAPISFD 1326 (4334)
T ss_pred ------------cccCCCCCCCCCCCCCeEEEEEcCCCCCCCceeEeecHHHHHHHHHHHHhcCCCCCCEEEEeCCccHH
Confidence 00000011112457899999999999999999999999998888887788889999999999999999
Q ss_pred hhhhHHHHHHHhcceEEEecC---CCHHHHHHHHHHhCCcEEEehHHHHHHHhcCccccCCCCceEEEEecCCCChhhhH
Q 008636 243 NGWSFTWGAAVVGATNVCLRK---FDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAGSPPPAPVLL 319 (558)
Q Consensus 243 ~g~~~~~~~l~~g~~~~~~~~---~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~~l~~v~~~g~~l~~~~~~ 319 (558)
.++..++.+++.|+++++.+. .++..+++.++++++|++.++|++++.+.+......++++|.+++|||++++++.+
T Consensus 1327 ~s~~~~~~~L~~G~~l~i~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~lr~~~~gGe~l~~~~~~ 1406 (4334)
T PRK05691 1327 VSVWECFWPLITGCRLVLAGPGEHRDPQRIAELVQQYGVTTLHFVPPLLQLFIDEPLAAACTSLRRLFSGGEALPAELRN 1406 (4334)
T ss_pred HHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEECcHHHHHHHHhCcccccCCcccEEEEeecCCCHHHHH
Confidence 888889999999999999863 68999999999999999999999999998766556788999999999999999999
Q ss_pred Hhhh-c-CCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEE
Q 008636 320 RTES-L-GFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIV 397 (558)
Q Consensus 320 ~~~~-~-~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~ 397 (558)
++.+ + ++.++|.||+||++..+....... ......++|.|.++. .++|+|+ +++.++.| ..|||+
T Consensus 1407 ~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~---------~~~~~~~iG~p~~~~-~~~i~d~-~~~~vp~G--~~GEL~ 1473 (4334)
T PRK05691 1407 RVLQRLPQVQLHNRYGPTETAINVTHWQCQA---------EDGERSPIGRPLGNV-LCRVLDA-ELNLLPPG--VAGELC 1473 (4334)
T ss_pred HHHHhCCCcEEEeCCCcChheeeeeeeeccc---------ccCCCCcccceeCCC-EEEEECC-CCCCCCCC--CceEEE
Confidence 9884 3 789999999999986655322110 011235789999998 9999997 68888888 889999
Q ss_pred EecccccccccCCchhhccccc--------CCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCc
Q 008636 398 MRGGSLMLGYLKDPEATSKCMK--------DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMV 469 (558)
Q Consensus 398 v~~~~~~~gy~~~~~~~~~~~~--------~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v 469 (558)
|+|+++++||+++|+.+...|. .+||+|||+|++++||.+++.||+|++||++|++|+|.+||+.|.++|+|
T Consensus 1474 i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~d~qiki~G~rie~~eIE~~l~~~~~V 1553 (4334)
T PRK05691 1474 IGGAGLARGYLGRPALTAERFVPDPLGEDGARLYRTGDRARWNADGALEYLGRLDQQVKLRGFRVEPEEIQARLLAQPGV 1553 (4334)
T ss_pred ecCcccchhhcCCccccHhhCCCCCCCCCCceEEEccceEEECCCCCEEEecccCcEEEECCEEcCHHHHHHHHHhCCCc
Confidence 9999999999999999988872 24999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEeeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHH
Q 008636 470 NEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDI 547 (558)
Q Consensus 470 ~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~ 547 (558)
.+++|+...+. .+..++++++...+.. ...++++++++++||.|++|..++++++||+|++||++|++|++.
T Consensus 1554 ~~a~v~~~~~~-~~~~lva~~~~~~~~~-----~~~~~l~~~l~~~Lp~y~vP~~~~~~~~lP~t~~GKidr~~L~~~ 1625 (4334)
T PRK05691 1554 AQAAVLVREGA-AGAQLVGYYTGEAGQE-----AEAERLKAALAAELPEYMVPAQLIRLDQMPLGPSGKLDRRALPEP 1625 (4334)
T ss_pred ceEEEEEeeCC-CCCEEEEEEEeCCCCC-----CCHHHHHHHHHHhCccccCCcEEEEccccCCCCCCCcChhhcCcc
Confidence 99999976654 4578899988766544 567899999999999999999999999999999999999999764
No 103
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=1.4e-62 Score=486.32 Aligned_cols=524 Identities=22% Similarity=0.233 Sum_probs=415.7
Q ss_pred CCCCCChhhHHHHHhhcCCCCceEEECC--------ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHH
Q 008636 10 NSCPLTPLGFIERAATACDDCPSIIYND--------TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELH 81 (558)
Q Consensus 10 ~~~~~tl~~~l~~~a~~~p~~~a~~~~~--------~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~ 81 (558)
.+.++|+++.|.+-+..+|+.+++.... +++||+|..+++..++..|+++|+++++.|+|++-|+++|+++.
T Consensus 71 ~~~~~T~~~~f~~~~~~~~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~lG~~~~~~VGIy~~N~pEWiis~ 150 (691)
T KOG1256|consen 71 FDGPLTLYEGFRRSVEKSGNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRKLGVKEDSKVGIYAFNRPEWIISE 150 (691)
T ss_pred CCCcccHHHHhhcchhccCCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCceEEEeccCChhhHHhH
Confidence 5678899999999999999999998743 68999999999999999999999999999999999999999999
Q ss_pred HHHhhcCcEEEeccccCChHHHHHHHhhcCccEEEEe-CcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCC
Q 008636 82 FAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD-HLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRI 160 (558)
Q Consensus 82 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (558)
.||...|.+.||+...++++.+.++++.+...++|+| ++....+.+...... ...++.++.++.............
T Consensus 151 ~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~~-~~~LK~iI~~~~~~~~~~~~~~~~-- 227 (691)
T KOG1256|consen 151 MACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKENDS-LPSLKAIIQLDEPSDELKEKAENN-- 227 (691)
T ss_pred HHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhccccc-CccceeEEEecCCchhhhhhhhcC--
Confidence 9999999999999999999999999999999999999 445555555544311 123566666665543322211111
Q ss_pred CCCCchhhHHHhhcCCCCCCCCC-CCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHh---ccc---ccccCCCCEE
Q 008636 161 PPADFVDTYENMLAKGDPQFSWV-RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVD---SLI---DWVVPKQSVL 233 (558)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~---~~~---~~~~~~~~~~ 233 (558)
+-.+.+|.++.+-+....... .+..++|.|.|+|||||||.||||++||+|+...... ... .......|++
T Consensus 228 --gv~v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~~~~~~dv~ 305 (691)
T KOG1256|consen 228 --GVEVYSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAKATVGDDVY 305 (691)
T ss_pred --CeEEEEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhcccccccccCceE
Confidence 122678888888886655544 4788999999999999999999999999999774432 111 1123347999
Q ss_pred EEecCchhhhhhhHHHHHHHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc------------------
Q 008636 234 LWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP------------------ 295 (558)
Q Consensus 234 ~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~------------------ 295 (558)
++.+|+.|++....-...++.|+++.+... |+..+.+.+++.+||++.++|.+|+++.+..
T Consensus 306 lSyLPLAHi~er~~~~~~~~~G~~IgF~~g-D~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr~l~~~A 384 (691)
T KOG1256|consen 306 LSYLPLAHIFERVVELYTFYIGAKIGFARG-DILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKRKLFNFA 384 (691)
T ss_pred EEeCcHHHHHHHHHHHhHhhcccEEEEecC-ChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 999999999998777777789999998874 8889999999999999999999998865431
Q ss_pred ---cc------------c--------------CCCCceEEEEecCCCChhhhHHhhh-cCCeeeecccCCCCCCcccccC
Q 008636 296 ---EA------------K--------------QLDRPVRILTAGSPPPAPVLLRTES-LGFIVSHGYGKTEIAGVNVSCA 345 (558)
Q Consensus 296 ---~~------------~--------------~~~~l~~v~~~g~~l~~~~~~~~~~-~~~~v~~~YG~tE~g~~~~~~~ 345 (558)
+. . -..++|.+++|++++++++...++. .|++|+++||+|||.+.++...
T Consensus 385 ~~~k~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~g~~v~eGYGlTEts~g~~~~~ 464 (691)
T KOG1256|consen 385 MAYKLEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAALGCRVLEGYGLTETSAGTTLTL 464 (691)
T ss_pred HHHHHHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhcCceeeecccccccCCceEecc
Confidence 00 0 0347899999999999999999994 5899999999999985444332
Q ss_pred CCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecccccccccCCchhhcccc-cCCcee
Q 008636 346 WKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM-KDGRYY 424 (558)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~ 424 (558)
.. ....+++|.|.+++ +++++|..+-+.-..+ ..|||||+|+++|+||+++|+.|.+.+ .|||++
T Consensus 465 ~~-----------d~~lgsvG~p~p~~-~vKL~dvpe~ny~a~~--~~GEIcirG~~Vf~GYyK~p~~T~e~ideDGWLh 530 (691)
T KOG1256|consen 465 PG-----------DNVLGSVGPPVPGN-EVKLVDVPEMNYDADG--SKGEICVRGPNVFMGYYKDPEKTAEAIDEDGWLH 530 (691)
T ss_pred CC-----------CCCCCCcCCcccCc-eEEEechHHhCcCcCC--CcceEEEecchhceeccCChHHHhhhhccccccc
Confidence 11 12567999999999 9999997555555555 469999999999999999999999999 799999
Q ss_pred eCceeEEccCCcEEEecccCCeee-eCceeechHHHHHHHhcCCCcceeEEEeeeCCCCCceeEEEEEecCCCCCCC--C
Q 008636 425 TGDVGMMHPDGYLEIKDRSKDVII-SGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGG--M 501 (558)
Q Consensus 425 TGD~~~~~~~g~l~~~GR~~d~i~-~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~--~ 501 (558)
|||+|+++++|.+.+.||++++|| ..|+.|.|+.||++..+.+.|.+.+|.+.... ..++++|++++.....- .
T Consensus 531 TGDiG~~~p~G~l~IidRkK~ifklaqGEyVaPe~IEniy~~~~~V~qi~V~g~s~~---~~LvaiVvpd~e~~~~~a~~ 607 (691)
T KOG1256|consen 531 TGDIGEWDPNGTLKIIDRKKNIFKLAQGEYVAPEKIENIYKRSLPVQQIFVLGDSLR---SFLVAIVVPDPEVLKSWAAK 607 (691)
T ss_pred cccceeECCCccEEEEecccceEEcCCCCccChHHHHHHHhcCCceEEEEEECCcch---hcEEEEEecChhhchhhHHH
Confidence 999999999999999999999999 78999999999999999999999999986543 35899999876543200 0
Q ss_pred -CCC------------H----HHHHHHH-HhcCCCccccCeEEEec------ccCCCCCCcchhHHHHHHHhhcccccC
Q 008636 502 -MTT------------E----KDIIQYC-RARIPRYMVPKTVVFID------ELPKTATGKVQKYVLGDIANSMSMSHS 556 (558)
Q Consensus 502 -~~~------------~----~~l~~~~-~~~l~~~~~p~~i~~v~------~~P~t~~GK~~r~~l~~~~~~~~~~~~ 556 (558)
... . +++.+.- .+.+..+...+.+.+.+ .=-.||+-|+.|..+.+.|+..+++-|
T Consensus 608 ~~~~~~~eelc~n~~~k~~vl~el~~~~~~~~l~~fe~vk~v~l~~~~FsienglltPTlK~KR~~l~~~yk~~Id~mY 686 (691)
T KOG1256|consen 608 DGVKGTFEELCRNLDVKEAVLSELVKVGKENGLKGFEQVKKVHLLPDPFSIENGLLTPTLKIKRPQLLKYYKKQIDELY 686 (691)
T ss_pred ccCchhHHHHhcChhhHHHHHHHHHHHHhhhhccChhhEeeEEEecccccccCCccchhhhhhhHHHHHHHHHHHHHHH
Confidence 001 1 1112221 12355566666666642 222689999999999999998876543
No 104
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.8e-61 Score=499.82 Aligned_cols=493 Identities=26% Similarity=0.362 Sum_probs=401.4
Q ss_pred HHHHhhcCCCCceEEE--CCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEecccc
Q 008636 20 IERAATACDDCPSIIY--NDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTR 97 (558)
Q Consensus 20 l~~~a~~~p~~~a~~~--~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~ 97 (558)
.+.+++++|+++|+++ .++.+||+||.+++.++|++|.+.|+++|++|++++++++++++++|||+++|++++++++.
T Consensus 3 ~~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l~~~ 82 (511)
T PRK13391 3 PGIHAQTTPDKPAVIMASTGEVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCVNSH 82 (511)
T ss_pred hhhhHhhCCCceEEEecCCCCEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhccEEeccccc
Confidence 3567888999999987 56789999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhHHHhhcCCC
Q 008636 98 LDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGD 177 (558)
Q Consensus 98 ~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (558)
.+.+.+.++++.+++++++++......+.+...... .....+....+.... ....+.+......
T Consensus 83 ~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~ 146 (511)
T PRK13391 83 LTPAEAAYIVDDSGARALITSAAKLDVARALLKQCP---GVRHRLVLDGDGELE-------------GFVGYAEAVAGLP 146 (511)
T ss_pred cCHHHHHHHHhccCCcEEEEchhhHHHHHHHHhcCC---CceEEEEecCCCCCc-------------ccccHHHHhcCCC
Confidence 999999999999999999999877666555543322 122223332211100 0122233222111
Q ss_pred CCCCCCCCCCCCCceEEEccCCCCCCCceeeec--HHHHHH---HHHhcccccccCCCCEEEEecCchhhhhhhHHHHHH
Q 008636 178 PQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQC--YKAFFI---IAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAA 252 (558)
Q Consensus 178 ~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t--~~~~~~---~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l 252 (558)
. ......++.++++|||||||.||+|.++ |.+... ........+.+...++++...|++|..++...+.++
T Consensus 147 ~----~~~~~~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~~~~~~ 222 (511)
T PRK13391 147 A----TPIADESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLWGFRSDMVYLSPAPLYHSAPQRAVMLVI 222 (511)
T ss_pred C----CCCCCcccccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhcCCCCCCeEEEcCCHHHHHHHHHHHHHH
Confidence 1 0112344678999999999999999954 555422 122233445677889999999999999988888899
Q ss_pred HhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc----cccCCCCceEEEEecCCCChhhhHHhhh-cCCe
Q 008636 253 VVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP----EAKQLDRPVRILTAGSPPPAPVLLRTES-LGFI 327 (558)
Q Consensus 253 ~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~----~~~~~~~l~~v~~~g~~l~~~~~~~~~~-~~~~ 327 (558)
..|+++++.+.+++..+++.++++++|++.++|+++..+.+.. ....+++++.+++||+++++++...+.+ ++..
T Consensus 223 ~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~g~~ 302 (511)
T PRK13391 223 RLGGTVIVMEHFDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVRDKYDLSSLEVAIHAAAPCPPQVKEQMIDWWGPI 302 (511)
T ss_pred HcCceEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCchhhcccCCccceeEEEEccCCCCHHHHHHHHHHcCCc
Confidence 9999999998899999999999999999999999998887654 2234679999999999999999999884 5889
Q ss_pred eeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecccccccc
Q 008636 328 VSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGY 407 (558)
Q Consensus 328 v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy 407 (558)
+++.||+||+++++..... ......+++|.+.++ .++++|+ ++..++.| +.|||+++|+ ++.||
T Consensus 303 v~~~YG~tE~~~~~~~~~~----------~~~~~~~~vG~~~~g--~~~i~d~-~~~~~~~g--~~Gel~~~g~-~~~gy 366 (511)
T PRK13391 303 IHEYYAATEGLGFTACDSE----------EWLAHPGTVGRAMFG--DLHILDD-DGAELPPG--EPGTIWFEGG-RPFEY 366 (511)
T ss_pred eeeeeccccccceEEecCc----------cccccCCCcCCcccc--eEEEECC-CCCCCCCC--CceEEEEecC-cceEE
Confidence 9999999999876543211 111234578888887 5889986 67777777 7899999999 88899
Q ss_pred cCCchhhccccc--CCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCCCCCce
Q 008636 408 LKDPEATSKCMK--DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEI 485 (558)
Q Consensus 408 ~~~~~~~~~~~~--~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~ 485 (558)
+++++.+...+. ++||+|||+|+++++|.+++.||.+|+++.+|.++++.+||++|.++|.|.+++|++.+++..++.
T Consensus 367 ~~~~~~~~~~~~~~~~w~~TGD~g~~~~~g~l~~~gR~~~~i~~~G~~v~~~eie~~l~~~~~v~~~~v~~~~~~~~g~~ 446 (511)
T PRK13391 367 LNDPAKTAEARHPDGTWSTVGDIGYVDEDGYLYLTDRAAFMIISGGVNIYPQEAENLLITHPKVADAAVFGVPNEDLGEE 446 (511)
T ss_pred cCChhHhHHhhccCCCEEecCCEEEECCCccEEEeccCCCEEEeCCEEECHHHHHHHHHhCCCcceEEEEecCCcccCce
Confidence 999988877663 489999999999999999999999999999999999999999999999999999999999888999
Q ss_pred eEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHhh
Q 008636 486 PCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANS 550 (558)
Q Consensus 486 ~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~ 550 (558)
+++++++.++.... ....++++++++++++++++|..+.+++++|+|++||++|+.|++.+.+
T Consensus 447 ~~~~~~~~~~~~~~--~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~gKv~r~~l~~~~~~ 509 (511)
T PRK13391 447 VKAVVQPVDGVDPG--PALAAELIAFCRQRLSRQKCPRSIDFEDELPRLPTGKLYKRLLRDRYWG 509 (511)
T ss_pred eEEEEEECCCCCcc--cchHHHHHHHHHhhcccCcCCcEEEEeecCCCCCccceeHHHHHHHhhc
Confidence 99988876653211 1345789999999999999999999999999999999999999998865
No 105
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.6e-61 Score=498.74 Aligned_cols=483 Identities=29% Similarity=0.387 Sum_probs=395.5
Q ss_pred ceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHHHHHhhc
Q 008636 31 PSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHS 110 (558)
Q Consensus 31 ~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~ 110 (558)
+++.+.++.+||+||.+.+.++|++|.+.|+++||+|+++++|++++++++|||+++|++++++++..+.+++..+++.+
T Consensus 3 ~~~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~ 82 (502)
T PRK08276 3 VIMAPSGEVVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDS 82 (502)
T ss_pred eEecCCCcEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcC
Confidence 45666789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhHHHhhcCCCCCCCCCCCCCCCC
Q 008636 111 ESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLD 190 (558)
Q Consensus 111 ~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (558)
+++++|+++.....+.+....... ....+........ ....+.+....... ......++
T Consensus 83 ~~~~ii~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~----~~~~~~~~ 141 (502)
T PRK08276 83 GAKVLIVSAALADTAAELAAELPA--GVPLLLVVAGPVP---------------GFRSYEEALAAQPD----TPIADETA 141 (502)
T ss_pred CCCEEEEccchhhHHHHHhhhccc--cccEEEEeCCCCC---------------ccccHHHHHhcCCC----CCCCCCCc
Confidence 999999988776665554332210 1223333221110 01233333322111 11234567
Q ss_pred ceEEEccCCCCCCCceeeecHHHHHHHH------HhcccccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEecCC
Q 008636 191 PMVLNYTWGTTSAPKGVVQCYKAFFIIA------VDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKF 264 (558)
Q Consensus 191 ~~~i~~TSGtTG~pk~v~~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~~ 264 (558)
.++++|||||||.||+|.++|.++.... ............+++++..|++|..++...+.++..|+++++.+.+
T Consensus 142 ~a~i~~TSGtTG~PK~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~ 221 (502)
T PRK08276 142 GADMLYSSGTTGRPKGIKRPLPGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPLRFGMSALALGGTVVVMEKF 221 (502)
T ss_pred ceEEEECCCCCCCCceEEEccCCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHHHHHHHHHhccceEEEcCCC
Confidence 8999999999999999999887654322 1111122235678999999999999987777899999999998889
Q ss_pred CHHHHHHHHHHhCCcEEEehHHHHHHHhcCcc----ccCCCCceEEEEecCCCChhhhHHhhh-cCCeeeecccCCCCCC
Q 008636 265 DAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE----AKQLDRPVRILTAGSPPPAPVLLRTES-LGFIVSHGYGKTEIAG 339 (558)
Q Consensus 265 ~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~----~~~~~~l~~v~~~g~~l~~~~~~~~~~-~~~~v~~~YG~tE~g~ 339 (558)
++..+++.++++++|++.++|+++..+++... ..+++++|.++++|++++.++++.+.+ ++..+++.||+||+++
T Consensus 222 ~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~g~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~ 301 (502)
T PRK08276 222 DAEEALALIERYRVTHSQLVPTMFVRMLKLPEEVRARYDVSSLRVAIHAAAPCPVEVKRAMIDWWGPIIHEYYASSEGGG 301 (502)
T ss_pred CHHHHHHHHHHhCCeEEEehHHHHHHHHhCccccCCCCCcccceEEEecCCCCCHHHHHHHHHHhCcHhhhhcccccccc
Confidence 99999999999999999999999999987652 234679999999999999999999884 5888999999999988
Q ss_pred cccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecccccccccCCchhhccccc
Q 008636 340 VNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419 (558)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~ 419 (558)
+++..... .....+++|.|. +. .++++|+ ++.+++.+ +.|||+++|+.++.||++++..+...+.
T Consensus 302 ~~~~~~~~----------~~~~~~~~G~~~-~~-~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~ 366 (502)
T PRK08276 302 VTVITSED----------WLAHPGSVGKAV-LG-EVRILDE-DGNELPPG--EIGTVYFEMDGYPFEYHNDPEKTAAARN 366 (502)
T ss_pred eeEecCcc----------ccccCCCcceec-cc-EEEEECC-CCCCCcCC--CceEEEEECCCccchhcCCHHHHHHHhc
Confidence 66543211 112235788888 66 9999996 67788777 7899999999999999999998888875
Q ss_pred C-CceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCCCCCceeEEEEEecCCCCC
Q 008636 420 D-GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDS 498 (558)
Q Consensus 420 ~-g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~ 498 (558)
+ |||+|||+++++++|.+++.||++|+++.+|.+|++.+||..|.++|+|.++++++..++..++.+++++++.++...
T Consensus 367 ~~~~~~TGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~iE~~i~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~ 446 (502)
T PRK08276 367 PHGWVTVGDVGYLDEDGYLYLTDRKSDMIISGGVNIYPQEIENLLVTHPKVADVAVFGVPDEEMGERVKAVVQPADGADA 446 (502)
T ss_pred CCCceeecceEEEcCCcCEEEeccCcceEEeCCEEeCHHHHHHHHHhCCCcceEEEEeCCCcccCceEEEEEEECCCCCC
Confidence 4 999999999999999999999999999999999999999999999999999999999998889999999998766431
Q ss_pred CCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHhhc
Q 008636 499 GGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSM 551 (558)
Q Consensus 499 ~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~~ 551 (558)
.. ...+++.+.++++++.+++|+.+++++++|+|++||++|++|++.+.+.
T Consensus 447 ~~--~~~~~i~~~~~~~l~~~~~p~~i~~~~~lP~t~~GKi~r~~L~~~~~~~ 497 (502)
T PRK08276 447 GD--ALAAELIAWLRGRLAHYKCPRSIDFEDELPRTPTGKLYKRRLRDRYWEG 497 (502)
T ss_pred Ch--hhHHHHHHHHHhhccCCCCCcEEEEecCCCCCcccchhHHHHHHHHHhh
Confidence 10 2345899999999999999999999999999999999999999997653
No 106
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.8e-61 Score=527.43 Aligned_cols=490 Identities=16% Similarity=0.183 Sum_probs=376.1
Q ss_pred CCCCChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcE
Q 008636 11 SCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAI 90 (558)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (558)
...+++.++|+++++++|+++|+++.++.+||+||.++++++|+.|.++|+++||+|+|+++|++++++++|||+++|++
T Consensus 444 ~~~~sl~~ll~~~a~~~pd~~Al~~~~~~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v~a~lA~~~aGav 523 (994)
T PRK07868 444 HTRISLGRIIAEQARDAPKGEFLLFDGRVHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGAV 523 (994)
T ss_pred CCCccHHHHHHHHHHHCCCCeEEEeCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCE
Confidence 66779999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhHH
Q 008636 91 FNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYE 170 (558)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (558)
++|++|. .++.++++.++++++|++.+....+.+. ...++.++...... ...........+.
T Consensus 524 ~vpl~p~---~~l~~il~~s~~~~li~~~~~~~~~~~~---------~~~iiv~~~~~~~~------~~~~~~~~~~~~~ 585 (994)
T PRK07868 524 AVLMPPD---TDLAAAVRLGGVTEIITDPTNLEAARQL---------PGRVLVLGGGESRD------LDLPDDADVIDME 585 (994)
T ss_pred EEEeCCc---hhHHHHHhccCCeEEEEChHHHHHHHhc---------CceEEEecCCcccc------ccCCcchhhhhhh
Confidence 9999985 5789999999999999987655443221 23344443211000 0000000011111
Q ss_pred HhhcCCCCCCC--CCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhhhHH
Q 008636 171 NMLAKGDPQFS--WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248 (558)
Q Consensus 171 ~~~~~~~~~~~--~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~ 248 (558)
++......... ...+..++++++|+|| ||||.||++.++|.++..........+.+..+|++++..|++|..++...
T Consensus 586 ~~~~~~~~~~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~~l~~~d~~L~~~Pl~h~~gl~~~ 664 (994)
T PRK07868 586 KIDPDAVELPGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAAALDRRDTVYCLTPLHHESGLLVS 664 (994)
T ss_pred hcCcccccCCcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhcCCCCCCeEEEecChHHHhHHHHH
Confidence 11111000000 0112236899999998 57777777777887765554444456678899999999999999998665
Q ss_pred HHHHH-hcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCcc--ccCCCCceEEEEecCCCChhhhHHhhh-c
Q 008636 249 WGAAV-VGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE--AKQLDRPVRILTAGSPPPAPVLLRTES-L 324 (558)
Q Consensus 249 ~~~l~-~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~--~~~~~~l~~v~~~g~~l~~~~~~~~~~-~ 324 (558)
+.+++ .|+++++.+.++++.+++.|+++++|++.++|++++.|++... ...++++|.++ |+.+++++.+++.+ +
T Consensus 665 l~~~l~gG~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~~~~~~~slr~~~--g~gl~~~l~~~~~~~~ 742 (994)
T PRK07868 665 LGGAVVGGSRIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAFVLHGNHPVRLFI--GSGMPTGLWERVVEAF 742 (994)
T ss_pred HHHHhccceEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCCccCCCCceEEEe--cCCCCHHHHHHHHHHh
Confidence 54444 4555556667899999999999999999999999999987642 23456788765 34599999999884 5
Q ss_pred C-CeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEe--CC--------CCC--cccCCCCC
Q 008636 325 G-FIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIV--DP--------ETG--LSVKRDGQ 391 (558)
Q Consensus 325 ~-~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~--d~--------~~~--~~~~~~~~ 391 (558)
+ +++++.||+||++.+..... ....+++|.|.++..+++|. |+ ++| +.++.+
T Consensus 743 ~~~~l~~~YG~TE~~~~~~~~~-------------~~~~~svG~p~pg~~~v~i~~~d~~~g~li~d~~G~~~~~~~g-- 807 (994)
T PRK07868 743 APAHVVEFFATTDGQAVLANVS-------------GAKIGSKGRPLPGAGRVELAAYDPEHDLILEDDRGFVRRAEVN-- 807 (994)
T ss_pred CchheeeeeecccccccccccC-------------CCCCcccCCccCCCCceeEEEecCcCCceeecCCceEEEcCCC--
Confidence 4 78999999999875432110 11345799999986455553 21 234 445555
Q ss_pred eeeEEEEecccccccccCCchhh--cccc--cCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCC
Q 008636 392 TRGEIVMRGGSLMLGYLKDPEAT--SKCM--KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHP 467 (558)
Q Consensus 392 ~~Gel~v~~~~~~~gy~~~~~~~--~~~~--~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~ 467 (558)
+.|||+++++.. + +|+.+ ...| .+|||+|||+|++|+||+|++.||+||+||++|.+|+|.+||+.|.+||
T Consensus 808 e~Gel~~~~~~~----~-~p~~t~~~~~~~~~dgw~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~I~p~EIE~~L~~hp 882 (994)
T PRK07868 808 EVGVLLARARGP----I-DPTASVKRGVFAPADTWISTEYLFRRDDDGDYWLVDRRGSVIRTARGPVYTEPVTDALGRIG 882 (994)
T ss_pred CceEEEEecCCC----C-ChhhhhHhcccccCCEEEeccceEEEcCCCCEEEeccCCCEEEeCCceEcHHHHHHHHhcCC
Confidence 789999998753 2 33322 1123 3789999999999999999999999999999999999999999999999
Q ss_pred CcceeEEEeeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHH
Q 008636 468 MVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDI 547 (558)
Q Consensus 468 ~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~ 547 (558)
+|.+++|++.+++. ++.++++|+++++.. .+.++|++++++ ++.|++|+.|+++++||+|++||++|++|++.
T Consensus 883 ~V~~aaVvg~~d~~-~~~~~a~Vv~~~~~~-----~~~~~L~~~l~~-l~~y~vP~~i~~v~~lP~T~sGKi~r~~L~~~ 955 (994)
T PRK07868 883 GVDLAVTYGVEVGG-RQLAVAAVTLRPGAA-----ITAADLTEALAS-LPVGLGPDIVHVVPEIPLSATYRPTVSALRAA 955 (994)
T ss_pred CeeEEEEEeecCCC-CceEEEEEEeCCCCc-----CCHHHHHHHHHh-CCCCcCCeEEEEeCCCCCCccccEehHHHHhc
Confidence 99999999998876 678899999877654 678899999986 99999999999999999999999999999876
Q ss_pred H
Q 008636 548 A 548 (558)
Q Consensus 548 ~ 548 (558)
.
T Consensus 956 ~ 956 (994)
T PRK07868 956 G 956 (994)
T ss_pred C
Confidence 3
No 107
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.5e-61 Score=514.33 Aligned_cols=507 Identities=17% Similarity=0.202 Sum_probs=382.6
Q ss_pred CCCCCCCCChhhHHHHHhhcCCCCceEEECC------ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHH
Q 008636 7 NPANSCPLTPLGFIERAATACDDCPSIIYND------TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYEL 80 (558)
Q Consensus 7 ~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~------~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~ 80 (558)
-++...+.++.++|+++++.+|+++|+++.+ +.+||+||.++++++|++|.+.|+++||+|+++++|+++++++
T Consensus 42 ~~~~~~~~~l~~~l~~~a~~~pd~~a~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~ 121 (624)
T PRK12582 42 HPLGPYPRSIPHLLAKWAAEAPDRPWLAQREPGHGQWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEHALM 121 (624)
T ss_pred CCCCCcccCHHHHHHHHHHHCCCchheecccCCCCceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHH
Confidence 3445567799999999999999999998743 5899999999999999999999999999999999999999999
Q ss_pred HHHHhhcCcEEEeccccCCh-----HHHHHHHhhcCccEEEEeCcC-hHHHHHHhhcCCCCCCCCcEEEEcCCccccCCC
Q 008636 81 HFAVPMSGAIFNTINTRLDA-----RTISIILKHSESKLVFVDHLS-SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSS 154 (558)
Q Consensus 81 ~lA~~~~G~~~v~l~~~~~~-----~~l~~~l~~~~~~~ii~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (558)
+|||+++|++++|++|.++. +++.++++.++++++|+++.. ........... ...++.+......
T Consensus 122 ~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-----~~~~i~~~~~~~~---- 192 (624)
T PRK12582 122 TLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPFARALAALDLL-----DVTVVHVTGPGEG---- 192 (624)
T ss_pred HHHHHHcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHHHHHHHHhhhhc-----CceEEEEcCCCcc----
Confidence 99999999999999999875 899999999999999997642 11111211110 1123333221100
Q ss_pred CCCCCCCCCCchhhHHHhhcCCCCCC--CCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCC---
Q 008636 155 SPPPRIPPADFVDTYENMLAKGDPQF--SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPK--- 229 (558)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~--- 229 (558)
.....+.++........ .......++++++|+|||||||.||+|.+||+++..........+....
T Consensus 193 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~ 263 (624)
T PRK12582 193 ---------IASIAFADLAATPPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLRPREPDPP 263 (624)
T ss_pred ---------cccccHHHHhhcCCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhccccCCCC
Confidence 00123444433221110 0112245789999999999999999999999999776654443333333
Q ss_pred CCEEEEecCchhhhhhh-HHHHHHHhcceEEEecC-CCH---HHHHHHHHHhCCcEEEehHHHHHHHhcCcc------cc
Q 008636 230 QSVLLWTLPMFHNNGWS-FTWGAAVVGATNVCLRK-FDA---PTVFALIRKHGVTHMCGAPIVLNLLSSSPE------AK 298 (558)
Q Consensus 230 ~~~~~~~~p~~~~~g~~-~~~~~l~~g~~~~~~~~-~~~---~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~------~~ 298 (558)
.++++..+|++|..|+. .++.++..|+++++.+. +++ ..+++.++++++|++.++|.++..|.+... ..
T Consensus 264 ~~~~l~~lPl~h~~g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~ 343 (624)
T PRK12582 264 PPVSLDWMPWNHTMGGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDDALRRS 343 (624)
T ss_pred CceEEEechHHHHHhHHHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCHHHHHH
Confidence 57999999999999874 45677888999988653 333 456777889999999999999998875431 12
Q ss_pred CCCCceEEEEecCCCChhhhHHhhhc-------CCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecc
Q 008636 299 QLDRPVRILTAGSPPPAPVLLRTESL-------GFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIG 371 (558)
Q Consensus 299 ~~~~l~~v~~~g~~l~~~~~~~~~~~-------~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 371 (558)
.++++|.+++||+++++++.+.+.+. ++++++.||+||+++++...... ....+++|.|.++
T Consensus 344 ~~~slr~i~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~-----------~~~~~svG~p~pg 412 (624)
T PRK12582 344 FFKNLRLMAYGGATLSDDLYERMQALAVRTTGHRIPFYTGYGATETAPTTTGTHWD-----------TERVGLIGLPLPG 412 (624)
T ss_pred HhhheeEEEecCCCCCHHHHHHHHHHHHhhcCCCceEEeccccccccceeecccCC-----------CCCCCCCCcCCCC
Confidence 46789999999999999999998863 36899999999998765532110 1234588999999
Q ss_pred cceeeEeCCCCCcccCCCCCeeeEEEEecccccccccCCchhhcccc-cCCceeeCceeEE-c---cCCcEEEecccCCe
Q 008636 372 LTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM-KDGRYYTGDVGMM-H---PDGYLEIKDRSKDV 446 (558)
Q Consensus 372 ~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~-~---~~g~l~~~GR~~d~ 446 (558)
+ ++++++. | +.|||+|+|++++.|||++|+.+.+.| .+|||+|||+|++ | ++|.+++.||++|+
T Consensus 413 ~-~v~i~~~--------G--~~GEl~vrg~~v~~GY~~~p~~t~~~f~~dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~ 481 (624)
T PRK12582 413 V-ELKLAPV--------G--DKYEVRVKGPNVTPGYHKDPELTAAAFDEEGFYRLGDAARFVDPDDPEKGLIFDGRVAED 481 (624)
T ss_pred c-EEEEccC--------C--CceEEEEECCcccccccCCccchhhhcCccCCccccceEEecCCcCCCCceEEeccchhh
Confidence 8 9998643 2 679999999999999999999998888 5899999999998 4 46899999999999
Q ss_pred ee-eCceeechHHHH--HHHhcCCCcceeEEEeeeCCCCCceeEEEEEecCCC------CCC---CCCCCHHHHHHHHHh
Q 008636 447 II-SGGENISSTEIE--SVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGT------DSG---GMMTTEKDIIQYCRA 514 (558)
Q Consensus 447 i~-~~G~~v~~~~iE--~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~------~~~---~~~~~~~~l~~~~~~ 514 (558)
|+ .+|++|+|.+|| .++.++|.|.+++|++++++..| ++|++.... .+. +.....+++.+.++.
T Consensus 482 i~~~~G~~i~p~~iE~e~~l~~~p~V~~a~VvG~~~~~~g----~lv~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 557 (624)
T PRK12582 482 FKLSTGTWVSVGTLRPDAVAACSPVIHDAVVAGQDRAFIG----LLAWPNPAACRQLAGDPDAAPEDVVKHPAVLAILRE 557 (624)
T ss_pred EecCCCcEechHHHHHHHHHhcCcchheEEEEcCCCCcEE----EEEecCHHHHHHHHhcCCCCHHHHhcCHHHHHHHHH
Confidence 99 689999998885 67889999999999999877654 333322110 000 000122344444433
Q ss_pred -------cCCCcc-ccCeEEEecccC------CCCCCcchhHHHHHHHhhcccccCC
Q 008636 515 -------RIPRYM-VPKTVVFIDELP------KTATGKVQKYVLGDIANSMSMSHSR 557 (558)
Q Consensus 515 -------~l~~~~-~p~~i~~v~~~P------~t~~GK~~r~~l~~~~~~~~~~~~~ 557 (558)
.++.+. +|+.+.+++++| +|++||+.|+.+.+.|++.++.-|+
T Consensus 558 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~~R~~~~~~y~~~i~~ly~ 614 (624)
T PRK12582 558 GLSAHNAEAGGSSSRIARALLMTEPPSIDAGEITDKGYINQRAVLERRAALVERLYA 614 (624)
T ss_pred HHHHHHhhcCCChhheEEEEEeCCCCCccCCcCCccccccHHHHHHHHHHHHHHHhc
Confidence 455555 999999998877 4578899999999999988776553
No 108
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=1.5e-60 Score=541.44 Aligned_cols=499 Identities=21% Similarity=0.246 Sum_probs=401.7
Q ss_pred CCCCChhhHHHHHhhcCC-CCceEEE-CCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcC
Q 008636 11 SCPLTPLGFIERAATACD-DCPSIIY-NDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSG 88 (558)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p-~~~a~~~-~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G 88 (558)
+.+.++.+.|++.++++| ++.|+.+ .++++||+||.++++++|+.|++ |+++||+|+++++|+++++++++||+++|
T Consensus 628 ~~~~~~~~~l~~~~~~~~~~~~ai~~~~~~~~Ty~el~~~~~~lA~~L~~-g~~~gd~V~i~~~n~~~~~~~~la~~~~G 706 (1140)
T PRK06814 628 DYDRTLFEALIEAAKIHGFKKLAVEDPVNGPLTYRKLLTGAFVLGRKLKK-NTPPGENVGVMLPNANGAAVTFFALQSAG 706 (1140)
T ss_pred cccCCHHHHHHHHHHHcCCCCeEeECCCCCccCHHHHHHHHHHHHHHHHh-cCCCCCeEEEEcCCchHHHHHHHHHHHCC
Confidence 345678899999888886 5677766 46899999999999999999976 99999999999999999999999999999
Q ss_pred cEEEeccccCChHHHHHHHhhcCccEEEEeCcChHHH--HHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCch
Q 008636 89 AIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLL--LEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFV 166 (558)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (558)
+++++++|..+.+++.+++++++++++|++++..... .+...... ....++.+++.... ....
T Consensus 707 ~v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~------------~~~~ 771 (1140)
T PRK06814 707 RVPAMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEALE---FGIRIIYLEDVRAQ------------IGLA 771 (1140)
T ss_pred CEEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhc---cCceEEEehHhhcc------------CChH
Confidence 9999999999999999999999999999987543321 11111111 12233333321100 0001
Q ss_pred hhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhh-
Q 008636 167 DTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGW- 245 (558)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~- 245 (558)
..+.+......+... .....++|+++++|||||||.||+|.++|+++..........++..++|++++.+|++|..++
T Consensus 772 ~~~~~~~~~~~~~~~-~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~ 850 (1140)
T PRK06814 772 DKIKGLLAGRFPLVY-FCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARIDFSPEDKVFNALPVFHSFGLT 850 (1140)
T ss_pred HHHHHHhhccCCccc-cCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhhCCCCcCEEEEecchHHHHHHH
Confidence 112222211111111 113467899999999999999999999999998877777777888999999999999999998
Q ss_pred hHHHHHHHhcceEEEecC-CCHHHHHHHHHHhCCcEEEehHHHHHHHhcCccccCCCCceEEEEecCCCChhhhHHhh-h
Q 008636 246 SFTWGAAVVGATNVCLRK-FDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAGSPPPAPVLLRTE-S 323 (558)
Q Consensus 246 ~~~~~~l~~g~~~~~~~~-~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~~l~~v~~~g~~l~~~~~~~~~-~ 323 (558)
..++.++..|+++++.+. .+...+.+.++++++|++.++|++++.+.+......++++|.+++||+++++++.+.+. .
T Consensus 851 ~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~lr~v~~gg~~l~~~~~~~~~~~ 930 (1140)
T PRK06814 851 GGLVLPLLSGVKVFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYAHPYDFRSLRYVFAGAEKVKEETRQTWMEK 930 (1140)
T ss_pred HHHHHHHHcCCEEEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhcccccccceeEEEEcCCcCCHHHHHHHHHH
Confidence 667888999999998864 56778889999999999999999999988765556678999999999999999999887 5
Q ss_pred cCCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecccc
Q 008636 324 LGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSL 403 (558)
Q Consensus 324 ~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~ 403 (558)
+++++++.||+||++.....+... .....++|.|.+++ ++++.+.. + .+ +.|||+++|+++
T Consensus 931 ~~~~~~~~YG~TE~~~~~~~~~~~-----------~~~~~~vG~p~~g~-~~~~~~~~-~----~~--~~Gel~v~g~~~ 991 (1140)
T PRK06814 931 FGIRILEGYGVTETAPVIALNTPM-----------HNKAGTVGRLLPGI-EYRLEPVP-G----ID--EGGRLFVRGPNV 991 (1140)
T ss_pred hCCcEEeccccccccceEEecCCC-----------CCCCCcCCccCCCC-eEEEeecC-C----CC--CceEEEEeCCCc
Confidence 689999999999998765543210 12245799999998 89987752 1 12 569999999999
Q ss_pred cccccCCchhhc-ccccCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCCCC
Q 008636 404 MLGYLKDPEATS-KCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482 (558)
Q Consensus 404 ~~gy~~~~~~~~-~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~ 482 (558)
+.||+++++... ....+|||+|||+|++|+||.+++.||.||+||.+|++|+|.+||+.|.+++++.+++|++.+++..
T Consensus 992 ~~gY~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~ 1071 (1140)
T PRK06814 992 MLGYLRAENPGVLEPPADGWYDTGDIVTIDEEGFITIKGRAKRFAKIAGEMISLAAVEELAAELWPDALHAAVSIPDARK 1071 (1140)
T ss_pred chhhcCCCCCCccccCCCCeEecCCEEEECCCCeEEEEecccCeeeeCCEEECHHHHHHHHHhcCCcccEEEEEcccCCC
Confidence 999998764322 2235899999999999999999999999999999999999999999999999999999999999988
Q ss_pred CceeEEEEEecCCCCCCCCCCCHHHHHHHHHhc-CCCccccCeEEEecccCCCCCCcchhHHHHHHHhhccc
Q 008636 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRAR-IPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSMSM 553 (558)
Q Consensus 483 ~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~-l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~~~~ 553 (558)
|+.+++++. +.+ .+.+++.+++++. ++++++|..+++++++|+|++||++|++|++++++...
T Consensus 1072 g~~~~~~~~---~~~-----~~~~~l~~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~~ 1135 (1140)
T PRK06814 1072 GERIILLTT---ASD-----ATRAAFLAHAKAAGASELMVPAEIITIDEIPLLGTGKIDYVAVTKLAEEAAA 1135 (1140)
T ss_pred CceEEEEEc---CCC-----cCHHHHHHHHHHcCCCcccCCcEEEEecCcCCCCCCCCcHHHHHHHHHHhhc
Confidence 888776654 111 5678899999864 99999999999999999999999999999999877543
No 109
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=1.3e-60 Score=494.06 Aligned_cols=456 Identities=19% Similarity=0.191 Sum_probs=346.3
Q ss_pred cCCchhHHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEEEeCcC------hHHHHHHhhcCCCCCCCCcEEEE
Q 008636 71 APNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS------SSLLLEVVSLFPPHSKTPKLVLI 144 (558)
Q Consensus 71 ~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 144 (558)
++|++++++++|||+++|++++|+++.++.+++.++++.++++++|+++.. ...+.+..... .. ..+.+
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~----~~-~~i~~ 75 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAA----PA-KAIVL 75 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcc----cc-eEEEE
Confidence 589999999999999999999999999999999999999999999997642 11222221110 11 22222
Q ss_pred cCCccccCCCCCCCCCCCCCchhhHHHhhcCCCC------CCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHH
Q 008636 145 TDDKEISSSSSPPPRIPPADFVDTYENMLAKGDP------QFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIA 218 (558)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~ 218 (558)
........ . ........+.++...... .........++++++|+|||||||.||+|.+||+++....
T Consensus 76 ~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~ 148 (499)
T PLN03051 76 PAAGEPVA---V----PLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCA 148 (499)
T ss_pred eccCcccC---C----ccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHH
Confidence 11100000 0 000001234444321110 0001112356899999999999999999999999987655
Q ss_pred HhcccccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEecC-CCHHHHHHHHHHhCCcEEEehHHHHHHHhcCcc-
Q 008636 219 VDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRK-FDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE- 296 (558)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~-~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~- 296 (558)
......+++..+|++++..|++|..++..++.+++.|+++++.+. +++..+++.|+++++|++.++|+++..|++...
T Consensus 149 ~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~ 228 (499)
T PLN03051 149 SDGWAHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAF 228 (499)
T ss_pred HHHHHhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCcc
Confidence 544455678889999999999999998778889999999998874 688999999999999999999999999987542
Q ss_pred ---ccCCCCceEEEEecCCCChhhhHHhhh-c--CCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceec
Q 008636 297 ---AKQLDRPVRILTAGSPPPAPVLLRTES-L--GFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTI 370 (558)
Q Consensus 297 ---~~~~~~l~~v~~~g~~l~~~~~~~~~~-~--~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 370 (558)
...++++|.+++||++++++..+++.+ . ++++++.||+||+++........ .....+++|.|.+
T Consensus 229 ~~~~~~~~~Lr~i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~----------~~~~~~~~G~p~~ 298 (499)
T PLN03051 229 AMEGLDWSKLRVFASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELASGYISSTLL----------QPQAPGAFSTASL 298 (499)
T ss_pred ccccCCchhheEEEecCCCCCHHHHHHHHHhccccceeEeeeccccccceeeccccc----------CCCCCccccCCCC
Confidence 345779999999999999999887765 3 47899999999986533221100 0112457899999
Q ss_pred ccceeeEeCCCCCcccCCCCCeeeEEEEecccc--cccccCCchhhcccccCC----------ceeeCceeEEccCCcEE
Q 008636 371 GLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSL--MLGYLKDPEATSKCMKDG----------RYYTGDVGMMHPDGYLE 438 (558)
Q Consensus 371 ~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~--~~gy~~~~~~~~~~~~~g----------~~~TGD~~~~~~~g~l~ 438 (558)
++ +++|+|+ ++++++.|+++.|||+++|+.+ +.|||+++. +. .+.+| ||+|||+|++|+||+++
T Consensus 299 ~~-~~~ivd~-~g~~~~~g~~~~Gel~v~g~~~~~~~gy~~~~~-~~-~~~~g~~~~~~~~~~~~~TGDlg~~d~dG~l~ 374 (499)
T PLN03051 299 GT-RFVLLND-NGVPYPDDQPCVGEVALAPPMLGASDRLLNADH-DK-VYYKGMPMYGSKGMPLRRHGDIMKRTPGGYFC 374 (499)
T ss_pred Cc-eEEEECC-CCCCCCCCCCcceEEEEecCcCCCCccccCCcc-cc-eeeecCCccccCCcceeecCCeEEECCCCcEE
Confidence 98 9999997 7888887754679999999976 589997653 32 23244 68999999999999999
Q ss_pred EecccCCeeeeCceeechHHHHHHHhc-CCCcceeEEEeeeCCCCC-ceeEEEE---EecCCCCCCCCCCCHHHHHHHH-
Q 008636 439 IKDRSKDVIISGGENISSTEIESVLYS-HPMVNEAAVVGRPDPFWQ-EIPCAFV---SLKTGTDSGGMMTTEKDIIQYC- 512 (558)
Q Consensus 439 ~~GR~~d~i~~~G~~v~~~~iE~~l~~-~~~v~~~~v~~~~~~~~~-~~~~~~v---~~~~~~~~~~~~~~~~~l~~~~- 512 (558)
+.||+||+||++|++|+|.+||++|.+ ||+|.+++|++++++..| +.++++| +++++... .+.+++++++
T Consensus 375 ~~gR~~d~ik~~G~~v~p~EIE~~l~~~~p~V~~aavvg~~d~~~g~~~~~a~v~~~v~~~~~~~----~~~~~l~~~~~ 450 (499)
T PLN03051 375 VQGRADDTMNLGGIKTSSVEIERACDRAVAGIAETAAVGVAPPDGGPELLVIFLVLGEEKKGFDQ----ARPEALQKKFQ 450 (499)
T ss_pred EEeccCCEEeeCCEECCHHHHHHHHHhcCCCcceEEEEEecCCCCCceEEEEEEEcceecccccc----cchHHHHHHHH
Confidence 999999999999999999999999996 999999999999999888 6788888 66655310 3455666555
Q ss_pred ---HhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHhhcccccC
Q 008636 513 ---RARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSMSMSHS 556 (558)
Q Consensus 513 ---~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~~~~~~~ 556 (558)
.++|+++..|..++++++||+|++||++|++|++.+.+....+|
T Consensus 451 ~~l~~~l~~~~~~~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~~~~~ 497 (499)
T PLN03051 451 EAIQTNLNPLFKVSRVKIVPELPRNASNKLLRRVLRDQLKKELSGRS 497 (499)
T ss_pred HHHHhhcCCccCCceEEEcCCCCCCCCccHHHHHHHHHHHHhhcccc
Confidence 45577766667899999999999999999999998877655444
No 110
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2e-60 Score=502.25 Aligned_cols=508 Identities=21% Similarity=0.230 Sum_probs=395.1
Q ss_pred CCCCCCCCCChhhHHHHHhhcCCCCceEEECC---ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHH
Q 008636 6 PNPANSCPLTPLGFIERAATACDDCPSIIYND---TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHF 82 (558)
Q Consensus 6 ~~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~---~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~l 82 (558)
+.+..+++ ++.++|+..++.+|+.+++...+ +.+||+||+.++.++|.+|+++|+++||+|+++++|++++++++|
T Consensus 14 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~~~~~l 92 (579)
T PRK09192 14 PRRYADFP-TLVEALDYAALGEAGMNFYDRRGQLEEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDFVEAFF 92 (579)
T ss_pred cccccchh-hHHHHHHHhhccCCceEEEecCCCEEEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhHHHHHH
Confidence 34555665 99999999999988766654332 679999999999999999999999999999999999999999999
Q ss_pred HHhhcCcEEEeccccCC-------hHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCC
Q 008636 83 AVPMSGAIFNTINTRLD-------ARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSS 155 (558)
Q Consensus 83 A~~~~G~~~v~l~~~~~-------~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (558)
||+++|++++++++..+ .+++..+++.++++++|++++..+.+.+..... ..+...
T Consensus 93 A~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~~------~~~~~~----------- 155 (579)
T PRK09192 93 ACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHGN------PLLHVL----------- 155 (579)
T ss_pred HHHHcCCeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHhhccc------ccccee-----------
Confidence 99999999999987543 578999999999999999887665555432111 111111
Q ss_pred CCCCCCCCCchhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhccc-ccccCCCCEEE
Q 008636 156 PPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLI-DWVVPKQSVLL 234 (558)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~-~~~~~~~~~~~ 234 (558)
.+.++........ ......++++++++|||||||.||+|.++|+++......... .+++.++|+++
T Consensus 156 ------------~~~~~~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~d~~l 222 (579)
T PRK09192 156 ------------SHAWFKALPEADV-ALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGLKVRPGDRCV 222 (579)
T ss_pred ------------ehhhhcccCCCcc-ccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhcccCCCCCeEE
Confidence 1111111111111 111245689999999999999999999999999887766666 67888999999
Q ss_pred EecCchhhhhhh-HHHHHHHhcceEEEecC----CCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc-----cccCCCCce
Q 008636 235 WTLPMFHNNGWS-FTWGAAVVGATNVCLRK----FDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP-----EAKQLDRPV 304 (558)
Q Consensus 235 ~~~p~~~~~g~~-~~~~~l~~g~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~-----~~~~~~~l~ 304 (558)
..+|++|..++. .++.++..|+++++.+. .++..+++.+.++++++++..|..+..+.... ....++++|
T Consensus 223 ~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~~~~~~~l~~lr 302 (579)
T PRK09192 223 SWLPFYHDMGLVGFLLTPVATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSKDLAELDLSCWR 302 (579)
T ss_pred EeCCCCCcchhHHHHHHHHHhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccccccccchhhhh
Confidence 999999998885 56677888888877652 36889999999999998887666665554332 223567899
Q ss_pred EEEEecCCCChhhhHHhhhc----C---CeeeecccCCCCCCcccccCCCCCCCC---------------CC--hhhhhh
Q 008636 305 RILTAGSPPPAPVLLRTESL----G---FIVSHGYGKTEIAGVNVSCAWKPKWNK---------------LP--ARERAS 360 (558)
Q Consensus 305 ~v~~~g~~l~~~~~~~~~~~----~---~~v~~~YG~tE~g~~~~~~~~~~~~~~---------------~~--~~~~~~ 360 (558)
.+++||+++++.+...+.+. + ..+++.||+||+++............. .+ ......
T Consensus 303 ~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (579)
T PRK09192 303 VAGIGADMIRPDVLHQFAEAFAPAGFDDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVR 382 (579)
T ss_pred eeEecCccCCHHHHHHHHHHHHhcCCChhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccce
Confidence 99999999999999888743 2 248999999999866554322111000 00 000001
Q ss_pred hcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecccccccccCCchhhcccc-cCCceeeCceeEEccCCcEEE
Q 008636 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM-KDGRYYTGDVGMMHPDGYLEI 439 (558)
Q Consensus 361 ~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~ 439 (558)
...++|.+.++. +++|+|+ ++..++.+ +.|||+++|++++.||+++++ +...+ .+|||+|||+|++ ++|.+++
T Consensus 383 ~~~~vG~~~p~~-~v~i~d~-~~~~~~~g--~~Gel~i~g~~~~~gY~~~~~-~~~~~~~dgw~~TGDlg~~-~~G~l~~ 456 (579)
T PRK09192 383 TFVNCGKALPGH-EIEIRNE-AGMPLPER--VVGHICVRGPSLMSGYFRDEE-SQDVLAADGWLDTGDLGYL-LDGYLYI 456 (579)
T ss_pred eEeecCCcCCCc-EEEEECC-CCCCCCCC--CEEEEEecCCchhhhhcCCcc-ccccccCCceeeccceeeE-ECCEEEE
Confidence 124689999998 9999997 67778777 789999999999999999944 44444 6899999999999 8999999
Q ss_pred ecccCCeeeeCceeechHHHHHHHhcCCCcc--eeEEEeeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCC
Q 008636 440 KDRSKDVIISGGENISSTEIESVLYSHPMVN--EAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIP 517 (558)
Q Consensus 440 ~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~--~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~ 517 (558)
+||++|+|+++|++|+|.+||++|.++|+|. ++++++++++. ++.++++++...+.. .+.+++.+++++.+.
T Consensus 457 ~GR~dd~i~~~G~~v~p~eIE~~l~~~p~V~~~~~~v~~~~~~~-~~~~~~~v~~~~~~~-----~~~~~l~~~~~~~l~ 530 (579)
T PRK09192 457 TGRAKDLIIINGRNIWPQDIEWIAEQEPELRSGDAAAFSIAQEN-GEKIVLLVQCRISDE-----ERRGQLIHALAALVR 530 (579)
T ss_pred EeccccEEEECCCccCHHHHHHHHHhcCCccCCcEEEEEeccCC-CeeEEEEEEecCCCh-----HHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998 89999998875 557888877655433 466788999988874
Q ss_pred -CccccCeEEEec--ccCCCCCCcchhHHHHHHHhhcccccC
Q 008636 518 -RYMVPKTVVFID--ELPKTATGKVQKYVLGDIANSMSMSHS 556 (558)
Q Consensus 518 -~~~~p~~i~~v~--~~P~t~~GK~~r~~l~~~~~~~~~~~~ 556 (558)
.++.|..++++. +||+|++||++|++|++++.+.....+
T Consensus 531 ~~~~~~~~i~~~~~~~lP~t~~GKv~R~~l~~~~~~~~~~~~ 572 (579)
T PRK09192 531 SEFGVEAAVELVPPHSLPRTSSGKLSRAKAKKRYLSGAFASL 572 (579)
T ss_pred HHhCCCceEEEeCCCCcCCCCCcchhHHHHHHHHHcCCCCcc
Confidence 577888888885 899999999999999999998776544
No 111
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=1.7e-60 Score=487.24 Aligned_cols=436 Identities=30% Similarity=0.460 Sum_probs=369.2
Q ss_pred cHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEEEeCc
Q 008636 41 TWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120 (558)
Q Consensus 41 Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 120 (558)
||+||.+++.++|+.|.+.|+++||+|+|+++|++++++++|||+++|++++++++..+.+.+..+++.++++++++++.
T Consensus 1 Ty~~l~~~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred ChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCC
Q 008636 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGT 200 (558)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGt 200 (558)
..... +.. ..+..+................+++++++|||||
T Consensus 81 ~~~~~---------------~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGt 122 (436)
T TIGR01923 81 LEEKD---------------FQA-----------------------DSLDRIEAAGRYETSLSASFNMDQIATLMFTSGT 122 (436)
T ss_pred ccccc---------------eee-----------------------cchHhhhhcccccccccccCCcCceEEEEeCCCC
Confidence 32100 000 0000110000011111123456799999999999
Q ss_pred CCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEecCCCHHHHHHHHHHhCCcE
Q 008636 201 TSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTH 280 (558)
Q Consensus 201 TG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~ 280 (558)
||.||+|.++|+++..........+++.++|++++..|++|..++..++.++..|+++++.+.+ ..+++.++++++|+
T Consensus 123 TG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~--~~~~~~l~~~~~t~ 200 (436)
T TIGR01923 123 TGKPKAVPHTFRNHYASAVGSKENLGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF--NQLLEMIANERVTH 200 (436)
T ss_pred CCCCcEEEEehHHHHHHHHHHHhhcCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH--HHHHHHHHHhCCeE
Confidence 9999999999999988888777788899999999999999999998889999999999998754 38999999999999
Q ss_pred EEehHHHHHHHhcCccccCCCCceEEEEecCCCChhhhHHhhhcCCeeeecccCCCCCCcccccCCCCCCCCCChhhhhh
Q 008636 281 MCGAPIVLNLLSSSPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360 (558)
Q Consensus 281 l~~~p~~l~~l~~~~~~~~~~~l~~v~~~g~~l~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~ 360 (558)
+.++|+++..+.+..... ++++.++++|+++++++.+.+...++.+++.||+||++.......... ..
T Consensus 201 ~~~~P~~l~~l~~~~~~~--~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~----------~~ 268 (436)
T TIGR01923 201 ISLVPTQLNRLLDEGGHN--ENLRKILLGGSAIPAPLIEEAQQYGLPIYLSYGMTETCSQVTTATPEM----------LH 268 (436)
T ss_pred EEeHHHHHHHHHhCcCCC--CceEEEEECCCCCCHHHHHHHHHhCCceeeEecCCccchhccCcCccc----------cc
Confidence 999999999998875332 689999999999999999988888999999999999987655432111 01
Q ss_pred hcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecccccccccCCchhhcccccCCceeeCceeEEccCCcEEEe
Q 008636 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIK 440 (558)
Q Consensus 361 ~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~ 440 (558)
...++|.+.+++ ++++.++..+ +.|||+++|+.++.||+++++.+...+.+|||+|||++++++||.+++.
T Consensus 269 ~~~~~G~~~~~~-~~~i~~~~~~--------~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~dg~~~~~ 339 (436)
T TIGR01923 269 ARPDVGRPLAGR-EIKIKVDNKE--------GHGEIMVKGANLMKGYLYQGELTPAFEQQGWFNTGDIGELDGEGFLYVL 339 (436)
T ss_pred cccCCCccCCCc-EEEEEeCCCC--------CceEEEEECCccchhhCCChhhhhhhhcCCCeeccceEEEcCCCCEEEe
Confidence 112488888887 8888433222 5699999999999999998887777677899999999999999999999
Q ss_pred cccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCcc
Q 008636 441 DRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYM 520 (558)
Q Consensus 441 GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~ 520 (558)
||.+|+||.+|.+|++.+||+.|.+++.|.++++++.++...+..+++++++.++ .+.+++.+++++.+++++
T Consensus 340 GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~-------~~~~~l~~~l~~~l~~~~ 412 (436)
T TIGR01923 340 GRRDDLIISGGENIYPEEIETVLYQHPGIQEAVVVPKPDAEWGQVPVAYIVSESD-------ISQAKLIAYLTEKLAKYK 412 (436)
T ss_pred ccccCeEEeCCEeeCHHHHHHHHHhCCCeeEEEEeCCcchhcCCeeEEEEEECCC-------CCHHHHHHHHHHhhhCCC
Confidence 9999999999999999999999999999999999999887777888888887653 577899999999999999
Q ss_pred ccCeEEEecccCCCCCCcchhHHH
Q 008636 521 VPKTVVFIDELPKTATGKVQKYVL 544 (558)
Q Consensus 521 ~p~~i~~v~~~P~t~~GK~~r~~l 544 (558)
+|..++++++||+|++||++|++|
T Consensus 413 ~p~~i~~~~~iP~t~~GK~~r~~L 436 (436)
T TIGR01923 413 VPIAFEKLDELPYNASGKILRNQL 436 (436)
T ss_pred CCeEEEEecCCCCCCCCceecccC
Confidence 999999999999999999999864
No 112
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.3e-60 Score=502.70 Aligned_cols=508 Identities=20% Similarity=0.278 Sum_probs=379.1
Q ss_pred CChhhHHHHHhhcCCCCceEEECC---------ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHH
Q 008636 14 LTPLGFIERAATACDDCPSIIYND---------TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAV 84 (558)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~---------~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~ 84 (558)
|++.++|++++..+|+++|+++.+ +.+||+||.+++.++|++|.+.| .+||+|+++++|++++++++|||
T Consensus 1 ~s~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~~~~~~lA~ 79 (578)
T PRK05850 1 SSVPSLLRERASLQPDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLEYIVAFLGA 79 (578)
T ss_pred CcHHHHHHHHHhcCCCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcccHHHHHHHH
Confidence 578999999999999999998632 68999999999999999999999 68999999999999999999999
Q ss_pred hhcCcEEEeccc---cCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCC
Q 008636 85 PMSGAIFNTINT---RLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIP 161 (558)
Q Consensus 85 ~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (558)
+++|++++|+++ ..+.+++.++++.+++++++++++....+.+........ ....++......
T Consensus 80 ~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------------- 145 (578)
T PRK05850 80 LQAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPGQ-SAPPVIEVDLLD------------- 145 (578)
T ss_pred HHcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhcccc-cccceEeecccc-------------
Confidence 999999999997 457889999999999999999887666554432211100 011122111000
Q ss_pred CCCchhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccc-cc-----cCCCCEEEE
Q 008636 162 PADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLID-WV-----VPKQSVLLW 235 (558)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~-~~-----~~~~~~~~~ 235 (558)
+..... . ......++++++++|||||||.||+|.++|+++.......... +. ...++++++
T Consensus 146 ----------~~~~~~--~-~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~ 212 (578)
T PRK05850 146 ----------LDSPRG--S-DARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVS 212 (578)
T ss_pred ----------cccCCc--c-ccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEE
Confidence 000000 0 0112456799999999999999999999999987665443322 11 345789999
Q ss_pred ecCchhhhhhh-HHHHHHHhcceEEEecC----CCHHHHHHHHHHhCCcEEEehHHH-HHHHhcCc-----cccCCCCce
Q 008636 236 TLPMFHNNGWS-FTWGAAVVGATNVCLRK----FDAPTVFALIRKHGVTHMCGAPIV-LNLLSSSP-----EAKQLDRPV 304 (558)
Q Consensus 236 ~~p~~~~~g~~-~~~~~l~~g~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~-l~~l~~~~-----~~~~~~~l~ 304 (558)
.+|++|..|+. .++.+++.|+++++.+. .++..+++.+++++++.. .+|.+ +..+.... ....++++|
T Consensus 213 ~~pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~lr 291 (578)
T PRK05850 213 WLPFYHDMGLVLGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTSDDDMAGLDLGGVL 291 (578)
T ss_pred ECCCCCCchhHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcchhhhcCcchhhhe
Confidence 99999999984 58889999999998864 278999999999999865 45554 44343221 123467899
Q ss_pred EEEEecCCCChhhhHHhhh-c---C---CeeeecccCCCCCCcccccCCCCCC--CCCChhhhh------------hhcc
Q 008636 305 RILTAGSPPPAPVLLRTES-L---G---FIVSHGYGKTEIAGVNVSCAWKPKW--NKLPARERA------------SLKA 363 (558)
Q Consensus 305 ~v~~~g~~l~~~~~~~~~~-~---~---~~v~~~YG~tE~g~~~~~~~~~~~~--~~~~~~~~~------------~~~~ 363 (558)
.+++||+++++.+.+++.+ + + ..+++.||+||++..+......... ......... ....
T Consensus 292 ~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~ 371 (578)
T PRK05850 292 GIISGSERVHPATLKRFADRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPLV 371 (578)
T ss_pred eEEECcCCCCHHHHHHHHHHHHhcCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCCCCceEE
Confidence 9999999999999888763 3 2 3689999999987544332111000 000000000 0011
Q ss_pred cCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecccccccccCCchhhccccc------------CCceeeCceeEE
Q 008636 364 RQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK------------DGRYYTGDVGMM 431 (558)
Q Consensus 364 ~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~------------~g~~~TGD~~~~ 431 (558)
..|.|. +. +++++|++++.+++.+ +.|||+++|++++.||+++++.+...|. +|||+|||+|++
T Consensus 372 ~~g~p~-~~-~~~ivd~~~~~~~~~g--~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~ 447 (578)
T PRK05850 372 SYGSPR-SP-TVRIVDPDTCIECPAG--TVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGFI 447 (578)
T ss_pred eccCCC-CC-EEEEEcCCCCcCCCCC--CEEEEEEecCcccccccCChhhhHHHhhcccccccccCCCCCeeeccceeeE
Confidence 233332 33 8999998778888888 8899999999999999999999887772 479999999999
Q ss_pred ccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCCCCCceeEEEEEecCCCCCCC-CCCCHHHHHH
Q 008636 432 HPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGG-MMTTEKDIIQ 510 (558)
Q Consensus 432 ~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~l~~ 510 (558)
+ +|.+++.||++|+|+++|++|+|.+||++|.+++.+ ++++++++++ .++.++++++++++..... .......+++
T Consensus 448 ~-~G~l~~~GR~~d~i~~~G~~i~p~eIE~~l~~~~~~-~~~v~~v~~~-~~~~~~a~v~~~~~~~~~~~~~~~~~~l~~ 524 (578)
T PRK05850 448 S-EGELFIVGRIKDLLIVDGRNHYPDDIEATIQEITGG-RVAAISVPDD-GTEKLVAIIELKKRGDSDEEAMDRLRTVKR 524 (578)
T ss_pred E-CCEEEEEcccccEEEECCeecCHHHHHHHHHHhcCC-cEEEEEecCC-CceEEEEEEEeccccCcchhhhhhHHHHHH
Confidence 8 999999999999999999999999999999999985 5888888877 6788999998876643110 0012345666
Q ss_pred HHHhcCCCc--cccCeEEEec--ccCCCCCCcchhHHHHHHHhhcccccCC
Q 008636 511 YCRARIPRY--MVPKTVVFID--ELPKTATGKVQKYVLGDIANSMSMSHSR 557 (558)
Q Consensus 511 ~~~~~l~~~--~~p~~i~~v~--~~P~t~~GK~~r~~l~~~~~~~~~~~~~ 557 (558)
.+...++.+ ..|..+++++ +||+|++||++|++|++.|.+..+++++
T Consensus 525 ~v~~~l~~~~~~~~~~~~~~~~~~iP~t~~GKi~R~~l~~~~~~~~~~~~~ 575 (578)
T PRK05850 525 EVTSAISKSHGLSVADLVLVAPGSIPITTSGKIRRAACVEQYRQDEFTRLD 575 (578)
T ss_pred HHHHHHHHHhCCCceEEEEeCCCCcCCCCCchHHHHHHHHHHHcCCccccc
Confidence 665544332 2466666764 8999999999999999999999888765
No 113
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=5e-60 Score=446.90 Aligned_cols=527 Identities=20% Similarity=0.242 Sum_probs=417.2
Q ss_pred CCCCCCCChhhHHHHHhhcCCCCceEEECC-----------------------ccccHHHHHHHHHHHHHHHHhCCCCCC
Q 008636 8 PANSCPLTPLGFIERAATACDDCPSIIYND-----------------------TTYTWSQTYRRCLQLASSLSSFGINPG 64 (558)
Q Consensus 8 ~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~-----------------------~~~Ty~~l~~~v~~la~~L~~~Gv~~g 64 (558)
+..+...|+.+++++.++.+.++.++.+.+ .++||.|+..++..+|++|.+.|++++
T Consensus 35 ~~~~g~~Tl~~~~~~~~~k~g~~~~mGtR~li~~h~ek~~dGK~f~k~~Lg~Y~w~sy~ev~~~~~~~gsGL~~lG~k~~ 114 (678)
T KOG1180|consen 35 PPNPGASTLYELFEECVKKFGKKDAMGTRELIKEHEEKQVDGKTFEKYELGDYKWMSYNEVYERVHNFGSGLVKLGLKPK 114 (678)
T ss_pred CCCCCcccHHHHHHHHHHhcCCCccccHHHHHHHHhhccCCCeEEEEEeccceeeecHHHHHHHHHHHHHHHHHhCCCCC
Confidence 344455599999999999999999997532 579999999999999999999999988
Q ss_pred CE-EEEEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEE
Q 008636 65 HV-VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVL 143 (558)
Q Consensus 65 d~-V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (558)
++ ++|+++.+.+|+.+++||++.+..+|.+...+..+.+.+-|++++++.+||+.+..+.+....+... ..+.++.
T Consensus 115 e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL~kl~~~l~~~~---~vk~II~ 191 (678)
T KOG1180|consen 115 ETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSELLPKLKAPLKQAK---TVKHIIY 191 (678)
T ss_pred CCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHHHHHHHHHHHhccC---ceeEEEE
Confidence 77 9999999999999999999999999999999999999999999999999999999887777666554 2455555
Q ss_pred EcCCccccCCCCCCCCCCCCCchhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhccc
Q 008636 144 ITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLI 223 (558)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~ 223 (558)
.+...-.......+.....+-.+.+|.++.+-+.+......+..++|+|+|+|||||||.||||+++|+|+.+.......
T Consensus 192 ~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~~~~~~P~p~Dia~IMYTSGSTG~PKGVml~H~NiVA~~~G~~~ 271 (678)
T KOG1180|consen 192 FDPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENEIPPHPPKPSDIACIMYTSGSTGLPKGVMLTHSNIVAGVTGVGE 271 (678)
T ss_pred ecCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCCCCCCCCCCCceEEEEEcCCCCCCCceEEEecccHHhhhhhhcc
Confidence 55322111111111111223346788888887777655555568899999999999999999999999999988887776
Q ss_pred cc-ccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEecCCCHHHHH--------HHHHHhCCcEEEehHHHHHHHhcC
Q 008636 224 DW-VVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVF--------ALIRKHGVTHMCGAPIVLNLLSSS 294 (558)
Q Consensus 224 ~~-~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~--------~~i~~~~~t~l~~~p~~l~~l~~~ 294 (558)
.. .+++.|+++..+|+.|+..+.+-+.+++.|+.+-..+..+..+-. -.+..++||++.++|.+|+++.+-
T Consensus 272 ~v~~lg~~D~yi~yLPLAHIlEl~aE~~~ft~G~~iGY~S~~TLtdts~ki~kg~kGD~~~lkPTiM~~VpAV~drVrKg 351 (678)
T KOG1180|consen 272 NVPELGPKDRYIAYLPLAHILELTAELVCFTWGGRIGYSSPLTLTDTSSKIKKGCKGDLTELKPTIMAAVPAVMDRVRKG 351 (678)
T ss_pred cCcccCCCceEEEechHHHHHHHHHHHHHHhhCCEeecCCcceecccchhhccCCcCccccccchhhhhhHHHHHHHHHH
Confidence 65 688999999999999999998888999999988765542221111 245678999999999999886543
Q ss_pred c--------------------------------------------cccCCCCceEEEEecCCCChhhhHHhh-hcCCeee
Q 008636 295 P--------------------------------------------EAKQLDRPVRILTAGSPPPAPVLLRTE-SLGFIVS 329 (558)
Q Consensus 295 ~--------------------------------------------~~~~~~~l~~v~~~g~~l~~~~~~~~~-~~~~~v~ 329 (558)
. ......++|.+++||++++++..+.+. -+.+++.
T Consensus 352 Vl~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG~lR~~LsGGapLS~dtQrF~nic~C~Pv~ 431 (678)
T KOG1180|consen 352 VLSKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGGNLRYILSGGAPLSPDTQRFMNICFCCPVL 431 (678)
T ss_pred HHHHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCCceEEEEeCCCCCCHHHHHHHHHhcccccc
Confidence 1 000145899999999999999999998 5688999
Q ss_pred ecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecccccccccC
Q 008636 330 HGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLK 409 (558)
Q Consensus 330 ~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~ 409 (558)
++||.||+++-++.... .....+.+|.|++.. +++++|-+++.....+..-.|||+++|++++.|||+
T Consensus 432 qGYGLTEtca~~tv~e~-----------~d~~~g~vG~pl~c~-eiKLvdw~EgGY~~~~~PPrGEI~i~G~~vt~gY~k 499 (678)
T KOG1180|consen 432 QGYGLTETCAAATVLEP-----------EDFSTGRVGAPLPCC-EIKLVDWEEGGYFAKNKPPRGEILIGGPNVTMGYYK 499 (678)
T ss_pred ccccccchhcccEecCh-----------hhcccccccCCccce-EEEEEEhhhcCccCCCCCCCceEEecCCccChhhhC
Confidence 99999998876665321 122345888888877 999999777766655543469999999999999999
Q ss_pred Cchhhcccc--cCC--ceeeCceeEEccCCcEEEecccCCeee-eCceeechHHHHHHHhcCCCcceeEEEeeeCCCCCc
Q 008636 410 DPEATSKCM--KDG--RYYTGDVGMMHPDGYLEIKDRSKDVII-SGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQE 484 (558)
Q Consensus 410 ~~~~~~~~~--~~g--~~~TGD~~~~~~~g~l~~~GR~~d~i~-~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~ 484 (558)
+++.+.+.| .+| ||+|||+|++++||+|.+++|++|.+| .+|+-|++..+|.+++..|.|+..+|++.... .
T Consensus 500 n~ekT~e~ft~~~G~~WF~TGDIGe~~pdG~LkIIDRKKdLVKlq~GEYIsL~KvEa~l~s~p~V~NICvyAd~~~---s 576 (678)
T KOG1180|consen 500 NEEKTKEDFTVEDGQRWFRTGDIGEFHPDGCLKIIDRKKDLVKLQNGEYISLGKVEAALRSSPYVDNICVYADSNK---S 576 (678)
T ss_pred ChhhhhhhceecCCcEEEeccccceecCCCcEEEeechhhhhhhcccceeehHHHHHHHhcCcchhheEEeccccc---c
Confidence 999999999 378 999999999999999999999999999 89999999999999999999999999987655 3
Q ss_pred eeEEEEEecCCCCC-----CCCCC-C--------------HHHHHHHH-HhcCCCccccCeEEEecccCC-------CCC
Q 008636 485 IPCAFVSLKTGTDS-----GGMMT-T--------------EKDIIQYC-RARIPRYMVPKTVVFIDELPK-------TAT 536 (558)
Q Consensus 485 ~~~~~v~~~~~~~~-----~~~~~-~--------------~~~l~~~~-~~~l~~~~~p~~i~~v~~~P~-------t~~ 536 (558)
.++++|++..+... .+... + .+++.+.- ..+|..+.+|..|++.++ |= |..
T Consensus 577 ~~VaiVVPn~~~lt~lA~k~Gi~~~~~e~lc~d~k~~~~v~k~L~~~ak~~~L~~iEip~~I~l~~e-~WTPenGlvT~A 655 (678)
T KOG1180|consen 577 KPVAIVVPNQKHLTKLAEKAGISGSTWEELCEDKKVVKAVLKELIEAAKSQKLERIEIPAKIVLSPE-PWTPENGLVTAA 655 (678)
T ss_pred eeEEEEcCCchHHHHHHHHcCCChhhHHHHhccHHHHHHHHHHHHHHHHhcccccccccceeEecCC-CcCCCccccHHH
Confidence 59999998754310 11000 0 11222222 345888899999998754 43 455
Q ss_pred CcchhHHHHHHHhhccc
Q 008636 537 GKVQKYVLGDIANSMSM 553 (558)
Q Consensus 537 GK~~r~~l~~~~~~~~~ 553 (558)
-|+.|+.++..|+....
T Consensus 656 ~KLKRk~I~~~~k~ei~ 672 (678)
T KOG1180|consen 656 LKLKRKEILAAYKKEID 672 (678)
T ss_pred HHhhHHHHHHHHHHHHH
Confidence 69999999998887544
No 114
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.4e-58 Score=464.68 Aligned_cols=407 Identities=21% Similarity=0.253 Sum_probs=353.5
Q ss_pred eEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcC
Q 008636 32 SIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSE 111 (558)
Q Consensus 32 a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~ 111 (558)
++++.++.+||+||.++++++|..|. .|+++|++|+++++|++++++++|||+++|++++|+++..+.+.+..+++.++
T Consensus 1 ~~~~~~~~~ty~el~~~~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~ 79 (414)
T PRK08308 1 MLIVNDEEYSKSDFDLRLQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRAG 79 (414)
T ss_pred CeEecCceecHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhCC
Confidence 46788899999999999999999985 68999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhHHHhhcCCCCCCCCCCCCCCCCc
Q 008636 112 SKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191 (558)
Q Consensus 112 ~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (558)
++++++++.... .. . .....++++
T Consensus 80 ~~~~i~~~~~~~--------------~~------~------------------------------------~~~~~~~~~ 103 (414)
T PRK08308 80 CHGLLYGESDFT--------------KL------E------------------------------------AVNYLAEEP 103 (414)
T ss_pred CCEEEecCcccc--------------cc------c------------------------------------CCCCCCCCc
Confidence 999998663100 00 0 001345689
Q ss_pred eEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhh-hHHHHHHHhcceEEEecCCCHHHHH
Q 008636 192 MVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGW-SFTWGAAVVGATNVCLRKFDAPTVF 270 (558)
Q Consensus 192 ~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~-~~~~~~l~~g~~~~~~~~~~~~~~~ 270 (558)
++++|||||||.||+|.++|+++..........+....+++.+...|++|.+|+ ..++.++..|+++++.+.+++..++
T Consensus 104 ~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~ 183 (414)
T PRK08308 104 SLLQYSSGTTGEPKLIRRSWTEIDREIEAYNEALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFAL 183 (414)
T ss_pred eEEEECCCCCCCCcEEEEehHhHHHHHHHHHHhhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHHH
Confidence 999999999999999999999998877776677778889999999999999987 5578889999999999888999999
Q ss_pred HHHHHhCCcEEEehHHHHHHHhcCccccCCCCceEEEEecCCCChhhhHHhhhcCCeeeecccCCCCCCcccccCCCCCC
Q 008636 271 ALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKW 350 (558)
Q Consensus 271 ~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~~l~~v~~~g~~l~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~~~~~ 350 (558)
+.++++++|++.++|+++..+.+.... ..+++.++++|+++++++.+.+++.+.++++.||+||++.+.....
T Consensus 184 ~~l~~~~~t~~~~~P~~~~~l~~~~~~--~~~l~~~~~~G~~l~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~----- 256 (414)
T PRK08308 184 NILRNTPQHILYAVPLMLHILGRLLPG--TFQFHAVMTSGTPLPEAWFYKLRERTTYMMQQYGCSEAGCVSICPD----- 256 (414)
T ss_pred HHHHHhCCeEEEcCHHHHHHHHhcCCc--cccccEEEEccCCCCHHHHHHHHHhCChhhhccCccccCCeeecCC-----
Confidence 999999999999999999999876532 2368899999999999999999877789999999999986543221
Q ss_pred CCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecccccccccCCchhhcccccCCceeeCceeE
Q 008636 351 NKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGM 430 (558)
Q Consensus 351 ~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~ 430 (558)
......+|.|.+++ ++++.+.. + +.||+++++. ++||+|||+|+
T Consensus 257 --------~~~~~~~G~p~~~~-~~~~~~~~-------~--~~gel~v~~~------------------~~~~~TGDl~~ 300 (414)
T PRK08308 257 --------MKSHLDLGNPLPHV-SVSAGSDE-------N--APEEIVVKMG------------------DKEIFTKDLGY 300 (414)
T ss_pred --------CCCCCccCccCCCe-EEEEecCC-------C--CCceEEEEcC------------------CceEECCceEE
Confidence 01234689999988 88886531 2 5699999852 57999999999
Q ss_pred EccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHH
Q 008636 431 MHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQ 510 (558)
Q Consensus 431 ~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~ 510 (558)
+++||.+++.||.+|+||.+|++|+|.+||+.|.++|+|.+++|++.+++..++.++++++...+ .+.+++++
T Consensus 301 ~~~dg~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~~~v~~a~v~~~~~~~~~~~~~~~v~~~~~-------~~~~~l~~ 373 (414)
T PRK08308 301 KSERGTLHFMGRMDDVINVSGLNVYPIEVEDVMLRLPGVQEAVVYRGKDPVAGERVKAKVISHEE-------IDPVQLRE 373 (414)
T ss_pred ECCCccEEEecccCCeEEECCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCceEEEEEEeCCC-------CCHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888899888876542 67789999
Q ss_pred HHHhcCCCccccCeEEEecccCCCCCCcchhHHHH
Q 008636 511 YCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLG 545 (558)
Q Consensus 511 ~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~ 545 (558)
+++++++.+++|..++++++||+|++||++|+.|+
T Consensus 374 ~l~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~~~ 408 (414)
T PRK08308 374 WCIQHLAPYQVPHEIESVTEIPKNANGKVSRKLLE 408 (414)
T ss_pred HHHHhCccccCCcEEEEeccCCCCCCcCeehhhhh
Confidence 99999999999999999999999999999999543
No 115
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.1e-57 Score=476.89 Aligned_cols=493 Identities=22% Similarity=0.209 Sum_probs=378.0
Q ss_pred ChhhHHHHHhhcCCCCceEEEC--CccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEE
Q 008636 15 TPLGFIERAATACDDCPSIIYN--DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFN 92 (558)
Q Consensus 15 tl~~~l~~~a~~~p~~~a~~~~--~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (558)
++.+.|...+..+|+.+++... .+.+||.||++++.++|.+|.+.|+++||+|+++++|++++++++|||+++|++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~gd~V~l~~~~~~~~~~~~la~~~~g~v~~ 82 (545)
T PRK07768 3 RFTEKMYANARTSPRGMVTGEPDAPVRHTWGEVHERARRIAGGLAAAGVGPGDAVAVLAGAPVEIAPTAQGLWMRGASLT 82 (545)
T ss_pred hHHHHHHHHhhCCCcceEEecCCCceEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHcCcccc
Confidence 5778888999999999999664 46899999999999999999999999999999999999999999999999999999
Q ss_pred eccccCChHHH-------HHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCc
Q 008636 93 TINTRLDARTI-------SIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADF 165 (558)
Q Consensus 93 ~l~~~~~~~~l-------~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (558)
++++..+.+++ ..+++.++++.+++++............ ...+
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~------~~~~------------------------ 132 (545)
T PRK07768 83 MLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPVLEEK------GIRV------------------------ 132 (545)
T ss_pred ccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhhhccc------CCce------------------------
Confidence 99998776544 4567888999999977544333221100 0011
Q ss_pred hhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCC-CEEEEecCchhhhh
Q 008636 166 VDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQ-SVLLWTLPMFHNNG 244 (558)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~g 244 (558)
..+.++...... ......++++++++|||||||.||+|.++|+++..........+++..+ |++++.+|++|..+
T Consensus 133 -~~~~~l~~~~~~---~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g 208 (545)
T PRK07768 133 -LTVADLLAADPI---DPVETGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAAEFDVETDVMVSWLPLFHDMG 208 (545)
T ss_pred -eehhhhcccCCC---CcCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhcCCCCCCceeEEeCCCccchH
Confidence 112222221111 1123457899999999999999999999999998877766666677766 89999999999988
Q ss_pred hh-HHHHHHHhcceEEEecC----CCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc------cccCCCCceEEEEecCCC
Q 008636 245 WS-FTWGAAVVGATNVCLRK----FDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP------EAKQLDRPVRILTAGSPP 313 (558)
Q Consensus 245 ~~-~~~~~l~~g~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~------~~~~~~~l~~v~~~g~~l 313 (558)
+. .+..++..|+++++++. .++..+++.+++++++++..+|..+..+.+.. ....++++|.++++|+++
T Consensus 209 ~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lr~~~~~g~~~ 288 (545)
T PRK07768 209 MVGFLTVPMYFGAELVKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKPGAFDLSSLRFALNGAEPI 288 (545)
T ss_pred HHHHHHHHHHCCceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccccCCCchheeeEEeccCCC
Confidence 85 46677889999888764 36788899999999999988888776665422 134567899999999999
Q ss_pred ChhhhHHhhh----cCC---eeeecccCCCCCCcccccCCCCCCCC-------C-------C-hhhhhhhcccCCceecc
Q 008636 314 PAPVLLRTES----LGF---IVSHGYGKTEIAGVNVSCAWKPKWNK-------L-------P-ARERASLKARQGVRTIG 371 (558)
Q Consensus 314 ~~~~~~~~~~----~~~---~v~~~YG~tE~g~~~~~~~~~~~~~~-------~-------~-~~~~~~~~~~~g~~~~~ 371 (558)
++...+.+.+ ++. .+++.||+||++..+........... . + .........++|.|.++
T Consensus 289 ~~~~~~~~~~~~~~~g~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g 368 (545)
T PRK07768 289 DPADVEDLLDAGARFGLRPEAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLPG 368 (545)
T ss_pred CHHHHHHHHHHHHhcCCCcccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcceEEeccCCCCC
Confidence 9999988864 344 49999999999876544322111000 0 0 00001234578999999
Q ss_pred cceeeEeCCCCCcccCCCCCeeeEEEEecccccccccCCchhhcccccCCceeeCceeEEccCCcEEEecccCCeeeeCc
Q 008636 372 LTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGG 451 (558)
Q Consensus 372 ~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G 451 (558)
. .++|+|+ ++..++.+ +.|||+++|+.++.||++.+......+.+|||+|||+++++++|.+++.||++|+|+.+|
T Consensus 369 ~-~~~i~~~-~~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G 444 (545)
T PRK07768 369 L-EVRVVDE-DGQVLPPR--GVGVIELRGESVTPGYLTMDGFIPAQDADGWLDTGDLGYLTEEGEVVVCGRVKDVIIMAG 444 (545)
T ss_pred C-EEEEECC-CCCCCCCC--CEEEEEEccCcccccccCCCCCcccccCCCeeeccceEEEecCCEEEEEccccceEEECC
Confidence 8 9999996 67888877 789999999999999998766555445688999999999999999999999999999999
Q ss_pred eeechHHHHHHHhcCCCcceeEEEeee--CCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCc--cccCeEEE
Q 008636 452 ENISSTEIESVLYSHPMVNEAAVVGRP--DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRY--MVPKTVVF 527 (558)
Q Consensus 452 ~~v~~~~iE~~l~~~~~v~~~~v~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~--~~p~~i~~ 527 (558)
.+|++.+||+.|.++|+|.+++|++.. +...++.+++++........ ....++.+.+++.+..+ ..|..+.+
T Consensus 445 ~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~~~v~~~~~~~~----~~~~~l~~~~~~~l~~~~~~~p~~v~~ 520 (545)
T PRK07768 445 RNIYPTDIERAAARVEGVRPGNAVAVRLDAGHSREGFAVAVESNAFEDP----AEVRRIRHQVAHEVVAEVGVRPRNVVV 520 (545)
T ss_pred EecCHHHHHHHHHhCcccccceEEEEEecCCCCceEEEEEEEecccccH----HHHHHHHHHHHHHHHHHhCCCccEEEE
Confidence 999999999999999999998877654 33334455555544332110 23345666776665443 47888888
Q ss_pred ec--ccCCCCCCcchhHHHHHHHh
Q 008636 528 ID--ELPKTATGKVQKYVLGDIAN 549 (558)
Q Consensus 528 v~--~~P~t~~GK~~r~~l~~~~~ 549 (558)
++ +||+|++||++|+.|++.|.
T Consensus 521 v~~~~lP~t~~GKi~r~~l~~~~~ 544 (545)
T PRK07768 521 LGPGSIPKTPSGKLRRANAAELVT 544 (545)
T ss_pred eCCCcCCCCCchhHHHHHHHHhcC
Confidence 86 89999999999999999875
No 116
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=2.1e-55 Score=417.46 Aligned_cols=507 Identities=25% Similarity=0.265 Sum_probs=396.4
Q ss_pred CCCChhhHHHHHhhcCCCCceEEECC--ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCc
Q 008636 12 CPLTPLGFIERAATACDDCPSIIYND--TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGA 89 (558)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~~--~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 89 (558)
...|++++|.++++++|+++|+++.+ +++||+|+.+.+.++|+.|..+|++.||.|+++|+|+++++.++|+++++|+
T Consensus 75 ~~~ti~~~F~~~vrr~p~k~aii~~~~~~~~Tf~e~~~~s~~~A~~~~~~~l~~GD~VAL~men~pefv~lWlGLaKlGv 154 (649)
T KOG1179|consen 75 ERRTIAELFLSQVRRQPDKPAIIYEGPFQSLTFAELDARSNRVANYLHAEGLKAGDVVALLMENRPEFVALWLGLAKLGV 154 (649)
T ss_pred cCCcHHHHHHHHHHhCCCccEEEEeCCCceeeHHHHHHHHHHHHHHHHHhhcccCCEEEEecCCChhHHHHHHhHHhhCc
Confidence 46799999999999999999999987 6999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhH
Q 008636 90 IFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTY 169 (558)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (558)
+...+|++.-.+.|.+-++.++++.+|++.+....+.++.+... ...+........ +.+ +...++
T Consensus 155 ~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~~~~e~~~~l~----~~~i~~~~~~~~-----~~~------~g~~~L 219 (649)
T KOG1179|consen 155 ITAFINTNLRGEPLLHSITVSGARALVVGPELLNALEEILPLLI----KNGIHVFSLGPT-----SVP------DGIESL 219 (649)
T ss_pred eeeeeccccccchhhhhhhhcCceEEEECHHHHHHHHhcchhhh----hccceEEecCCC-----CCC------chHHHH
Confidence 99999999999999999999999999999988877777633322 111222221110 001 113444
Q ss_pred HHhhcCCCCCC---CCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhh-
Q 008636 170 ENMLAKGDPQF---SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGW- 245 (558)
Q Consensus 170 ~~~~~~~~~~~---~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~- 245 (558)
...++....+. ....+....++++.+|||||||.||+.+++|.............++++++|+++.++|++|..|.
T Consensus 220 ~~~l~~~~~~~vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~g~~~~DvvY~~lPLYHsaa~i 299 (649)
T KOG1179|consen 220 LAKLSAAPKHPVPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVFGMTADDVVYTTLPLYHSAAGI 299 (649)
T ss_pred HHhhcccccCCCCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCccceEEEcchhHHHHHHH
Confidence 44444443333 22234566799999999999999999999999987777667778899999999999999999886
Q ss_pred hHHHHHHHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCccccCCCCceEEEEecCCCChhhhHHhh-hc
Q 008636 246 SFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAGSPPPAPVLLRTE-SL 324 (558)
Q Consensus 246 ~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~~l~~v~~~g~~l~~~~~~~~~-~~ 324 (558)
..+.+++..|+++++-.+|+..++|+.+.+|++|+......+++.|++.+....-+..+.-+.-|-.+-++.++.+. ++
T Consensus 300 lGi~~~l~~GaT~VlrkKFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~er~HkVRla~GNGLR~diW~~Fv~RF 379 (649)
T KOG1179|consen 300 LGIGGCLLHGATVVLRKKFSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPEERQHKVRLAYGNGLRPDIWQQFVKRF 379 (649)
T ss_pred HHHHHHHhcCceEEEecccchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChhhcCceEEEEecCCCCchHHHHHHHHc
Confidence 56788999999999999999999999999999999999999999999998444444445555566677788888887 67
Q ss_pred CCe-eeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCc--------ccCCCCCeeeE
Q 008636 325 GFI-VSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGL--------SVKRDGQTRGE 395 (558)
Q Consensus 325 ~~~-v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~--------~~~~~~~~~Ge 395 (558)
|.+ |...||+||...-......+.....+. +.......+. ++-=+|+++++ .+++..++.|.
T Consensus 380 g~~~IgE~YgaTEgn~~~~N~d~~vGA~G~~--------~~~~~~l~p~-~LIk~D~~t~E~iRd~~G~Ci~~~~GEpGl 450 (649)
T KOG1179|consen 380 GIIKIGEFYGATEGNSNLVNYDGRVGACGFM--------SRLLKLLYPF-RLIKVDPETGEPIRDSQGLCIPCPPGEPGL 450 (649)
T ss_pred CCCeEEEEeccccCcceeeeecCccccccch--------hhhhhhccce-EEEEecCCCCceeecCCceEEECCCCCCce
Confidence 765 999999999654333222111111110 1112222222 33233444444 33344447786
Q ss_pred EEEe----cc-cccccccCCchhhcccc-------cCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHH
Q 008636 396 IVMR----GG-SLMLGYLKDPEATSKCM-------KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVL 463 (558)
Q Consensus 396 l~v~----~~-~~~~gy~~~~~~~~~~~-------~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l 463 (558)
++-+ .| .-|.||.+....++... .|-||+|||+-.+|+.|++||.+|..|.++..|++|+..|||++|
T Consensus 451 Lv~~i~~k~P~~~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~~GylYF~DRtGDTFRWKGENVsTtEVe~~l 530 (649)
T KOG1179|consen 451 LVGKIVQKNPLRSFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADELGYLYFKDRTGDTFRWKGENVSTTEVEDVL 530 (649)
T ss_pred EEEEeccCCchhhhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEecCCcEEEeccCCCceeecCCcccHHHHHHHH
Confidence 6432 22 23899999776665543 355999999999999999999999999999999999999999999
Q ss_pred hcCCCcceeEEEeeeCCCC-CceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhH
Q 008636 464 YSHPMVNEAAVVGRPDPFW-QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKY 542 (558)
Q Consensus 464 ~~~~~v~~~~v~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~ 542 (558)
.....+.|+.|+|+.-+.. |..=.|.|+..++.. .+...+-..+++.||.|.+|..+.+++++++|.+-|..+.
T Consensus 531 ~~~~~~~dv~VYGV~VP~~EGRaGMAaI~~~p~~~-----~d~~~l~~~l~~~LP~YA~P~FlRl~~~i~~TgTFKl~K~ 605 (649)
T KOG1179|consen 531 SALDFLQDVNVYGVTVPGYEGRAGMAAIVLDPTTE-----KDLEKLYQHLRENLPSYARPRFLRLQDEIEKTGTFKLQKT 605 (649)
T ss_pred hhhccccceeEEEEecCCccCccceEEEEecCccc-----chHHHHHHHHHhhCccccchHHHHHHhhhhcccchhhHHH
Confidence 9999999999999865543 233345566666665 7899999999999999999999999999999999999998
Q ss_pred HHHHH
Q 008636 543 VLGDI 547 (558)
Q Consensus 543 ~l~~~ 547 (558)
.|++.
T Consensus 606 ~L~~e 610 (649)
T KOG1179|consen 606 ELQKE 610 (649)
T ss_pred HHHHc
Confidence 88875
No 117
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=2.5e-56 Score=453.64 Aligned_cols=396 Identities=29% Similarity=0.419 Sum_probs=317.4
Q ss_pred HHHHhhcCCCCceEEE-CCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccccC
Q 008636 20 IERAATACDDCPSIIY-NDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRL 98 (558)
Q Consensus 20 l~~~a~~~p~~~a~~~-~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~ 98 (558)
|+++|+++||++|+++ .++++||+||++++.++|..|.+.|+++|++|+++++|++++++++|||+++|++++|++|.+
T Consensus 1 f~~~a~~~pd~~a~~~~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~v~l~~~~ 80 (417)
T PF00501_consen 1 FERQAQRYPDRIALIDDEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEFVVAFLACLRAGAIPVPLDPSL 80 (417)
T ss_dssp HHHHHHHSTTSEEEEETTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHHHHHHHHHHHTT-EEEEEETTS
T ss_pred ChhHHhhCCCceEEEECCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccceeeeeeccccccccccccccccc
Confidence 6899999999999999 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHhhcCccEEEE----eCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhHHHhhc
Q 008636 99 DARTISIILKHSESKLVFV----DHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLA 174 (558)
Q Consensus 99 ~~~~l~~~l~~~~~~~ii~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (558)
+.+++.++++.++++++|+ +......+....... .....+..++...... .. .........
T Consensus 81 ~~~~~~~~l~~~~~~~ii~~~~~d~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-----------~~-~~~~~~~~~ 145 (417)
T PF00501_consen 81 SEDELRHILRQSGPKVIITSEAVDSEPLKKLKSIFKQE---DPSSSIIILDRDDLPK-----------KE-ALKSASLSD 145 (417)
T ss_dssp SHHHHHHHHHHHTESEEEECHHHSCHHHHHHHHHHTTS---TTTEEEEEESHSSCTT-----------CH-HHHHHHHCH
T ss_pred ccccccccccccceeEEEEeccccccccccchhhhccc---cccccccccccccccc-----------cc-ccccccccc
Confidence 9999999999999999997 222112222222211 1123344444322110 00 001111110
Q ss_pred CCCCCCCCCCC-CCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcc--cccccCCCCEEEEecCchhhhhh-hHHHH
Q 008636 175 KGDPQFSWVRP-KSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSL--IDWVVPKQSVLLWTLPMFHNNGW-SFTWG 250 (558)
Q Consensus 175 ~~~~~~~~~~~-~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~--~~~~~~~~~~~~~~~p~~~~~g~-~~~~~ 250 (558)
... .+ ..++++++++|||||||.||+|.++|+++........ ..++++ +++++..|++|..|+ ..++.
T Consensus 146 ~~~------~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~--d~~l~~~p~~~~~g~~~~~~~ 217 (417)
T PF00501_consen 146 EPQ------SPEDSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYFGLG--DRILSFLPLSHIFGLISALLA 217 (417)
T ss_dssp CSH------STTHTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTTTTT--TEEEESS-TTSHHHHHHHHHH
T ss_pred ccc------cCCCCccceeEeeccccccccccccccccccccccccccccccccccC--ceEEeeccccccccccccccc
Confidence 000 00 0457999999999999999999999999987766543 122223 699999999999999 88999
Q ss_pred HHHhcceEEEecCCC---HHHHHHHHHHhCCcEEEehHHHHHHHhcCccc------cCCCCceEEEEecCCCChhhhHHh
Q 008636 251 AAVVGATNVCLRKFD---APTVFALIRKHGVTHMCGAPIVLNLLSSSPEA------KQLDRPVRILTAGSPPPAPVLLRT 321 (558)
Q Consensus 251 ~l~~g~~~~~~~~~~---~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~------~~~~~l~~v~~~g~~l~~~~~~~~ 321 (558)
++..|+++++.+... ++.+++.++++++|++.++|.+++.+++.... ..++++|.++++|+++++++.+++
T Consensus 218 ~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~ 297 (417)
T PF00501_consen 218 ALFSGATLVLPSPFDLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDLSSLRTVISGGEPLPPDLLRRL 297 (417)
T ss_dssp HHHCTSEEEEESSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTGTT-SEEEEESST-CHHHHHHH
T ss_pred cccccccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccccccccccCChhhcccc
Confidence 999999999998654 47789999999999999999999999983322 368889999999999999999999
Q ss_pred hh-cCC-eeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEe
Q 008636 322 ES-LGF-IVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMR 399 (558)
Q Consensus 322 ~~-~~~-~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~ 399 (558)
++ ++. ++++.||+||++.+++... .........++|.|.+++ +++|+|++++++++.+ +.|||+++
T Consensus 298 ~~~~~~~~i~~~YG~tE~~~~~~~~~---------~~~~~~~~~~~G~~~~~~-~~~ivd~~~~~~~~~g--~~Gei~i~ 365 (417)
T PF00501_consen 298 RKAFGNAPIINLYGSTETGSIATIRP---------PEDDIEKPGSVGKPLPGV-EVKIVDPNTGEPLPPG--EPGEIVIR 365 (417)
T ss_dssp HHHHTTSEEEEEEEEGGGSSEEEEEE---------TTTHHSSTTSEBEESTTE-EEEEECTTTSSBESTT--SEEEEEEE
T ss_pred ccccccccceecccccccceeeeccc---------cccccccccccccccccc-cccccccccccccccc--cccccccc
Confidence 95 465 8999999999999887542 112223445789999988 9999999889999888 78999999
Q ss_pred cccccccccCCchhhcccccC-CceeeCceeEEccCCcEEEecccCCeeeeC
Q 008636 400 GGSLMLGYLKDPEATSKCMKD-GRYYTGDVGMMHPDGYLEIKDRSKDVIISG 450 (558)
Q Consensus 400 ~~~~~~gy~~~~~~~~~~~~~-g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~ 450 (558)
|++++.||+++++.+...|.+ |||+|||+|++|+||.+++.||.||+||++
T Consensus 366 ~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~g~~d~~G~~~~~GR~~~~i~~~ 417 (417)
T PF00501_consen 366 GPNVFSGYYNDPELTAEAFIDDGWYRTGDLGRLDEDGYLYILGRSDDMIKVR 417 (417)
T ss_dssp STTSBSEETTBHHHHHHHEETTSEEEEEEEEEEETTSEEEEEEEGSCEEEET
T ss_pred CCccceeeeccccccccccccccceecceEEEECCCCeEEEEEeeCCEEEeC
Confidence 999999999999999988865 899999999999999999999999999864
No 118
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=1.3e-51 Score=418.00 Aligned_cols=393 Identities=24% Similarity=0.277 Sum_probs=327.0
Q ss_pred cHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEEEeC
Q 008636 41 TWSQTYRRCLQLASSLSS-FGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH 119 (558)
Q Consensus 41 Ty~~l~~~v~~la~~L~~-~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 119 (558)
||+||.+.+.++|++|.+ .|+++||+|+++++|+++++++++||+++|++++++++..+.+.+..+++.+++++++++.
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 899999999999999998 8999999999999999999999999999999999999999999999999999999999988
Q ss_pred cChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCC
Q 008636 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWG 199 (558)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSG 199 (558)
+....+... ...+......... .................+++++++||||
T Consensus 81 ~~~~~~~~~---------~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~i~~TSG 130 (408)
T TIGR01733 81 ALASRLAGL---------VLPIILVDPLELA---------------------ALDDAPAPPPPDAPSGPDDLAYVIYTSG 130 (408)
T ss_pred chhhhcccc---------CCceEEechhhhh---------------------hcccccccccccCCCCCCCcEEEEEcCC
Confidence 654433221 1112222111000 0000000000001134679999999999
Q ss_pred CCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEecCCC---HHHHHHHHHHh
Q 008636 200 TTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFD---APTVFALIRKH 276 (558)
Q Consensus 200 tTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~~~---~~~~~~~i~~~ 276 (558)
|||.||+|.++|+++..........+.+..++++++..|++|..++..++.++..|+++++.+... +..+.+.++++
T Consensus 131 TtG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~ 210 (408)
T TIGR01733 131 STGRPKGVVVTHRSLVNLLAWLARRYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERDAALLAALIAEH 210 (408)
T ss_pred CCCCCCEEEeccHHHHHHHHHHHHhcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHc
Confidence 999999999999999988887777888889999999999999999988999999999999987643 68899999999
Q ss_pred CCcEEEehHHHHHHHhcCccccCCCCceEEEEecCCCChhhhHHhhh-cC-CeeeecccCCCCCCcccccCCCCCCCCCC
Q 008636 277 GVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAGSPPPAPVLLRTES-LG-FIVSHGYGKTEIAGVNVSCAWKPKWNKLP 354 (558)
Q Consensus 277 ~~t~l~~~p~~l~~l~~~~~~~~~~~l~~v~~~g~~l~~~~~~~~~~-~~-~~v~~~YG~tE~g~~~~~~~~~~~~~~~~ 354 (558)
++|.+.++|.+++.|.+... ..++++|.++++|+++++++++.+.+ ++ +.+++.||+||+++++..........
T Consensus 211 ~~t~l~~~p~~~~~l~~~~~-~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~--- 286 (408)
T TIGR01733 211 PVTVLNLTPSLLALLAAALP-PALASLRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTVWSTATLVDADDA--- 286 (408)
T ss_pred CceEEEeCHHHHHHHHHhhh-hcccCceEEEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEcCcccc---
Confidence 99999999999999988765 66789999999999999999999984 55 89999999999998775322111100
Q ss_pred hhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecccccccccCCchhhcccccC-------C--ceee
Q 008636 355 ARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD-------G--RYYT 425 (558)
Q Consensus 355 ~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-------g--~~~T 425 (558)
... ...++|.+.++. +++|+|++ +..++.+ +.|||+++|++++.||+++++.+...|.. | ||+|
T Consensus 287 --~~~-~~~~~G~~~~~~-~~~i~~~~-~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~T 359 (408)
T TIGR01733 287 --PRE-SPVPIGRPLANT-RLYVLDDD-LRPVPVG--VVGELYIGGPGVARGYLNRPELTAERFVPDPFAGGDGARLYRT 359 (408)
T ss_pred --CCc-cccccCcccCCc-eEEEECCC-CCCCCCC--CceEEEecCccccccccCChhhhhcceeeCCCCCCCCceEEEC
Confidence 000 256899999998 99999985 8888877 78999999999999999999988877632 2 9999
Q ss_pred CceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEE
Q 008636 426 GDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAV 474 (558)
Q Consensus 426 GD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v 474 (558)
||+++++++|++++.||.+|+|+.+|++++|.+||+.+..+++|.+++|
T Consensus 360 GDl~~~d~~g~~~~~gR~~~~i~~~G~~v~~~~ie~~l~~~~~v~~~~v 408 (408)
T TIGR01733 360 GDLVRYLPDGNLEFLGRIDDQVKIRGYRIELGEIEAALLRHPGVREAVV 408 (408)
T ss_pred CceEEEcCCCCEEEeeccCCEEEeCeEEechHHHHHHHhcCcchhhhcC
Confidence 9999999999999999999999999999999999999999999998875
No 119
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.8e-47 Score=379.62 Aligned_cols=320 Identities=28% Similarity=0.379 Sum_probs=275.3
Q ss_pred CCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEe---c
Q 008636 186 KSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCL---R 262 (558)
Q Consensus 186 ~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~---~ 262 (558)
..++++++++|||||||.||+|.++|+++.......... +...++++..+|++|..++..++.+++.|++.++. .
T Consensus 32 ~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~--~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~v~~~~~~ 109 (358)
T PRK07824 32 PIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDR--LGGPGQWLLALPAHHIAGLQVLVRSVIAGSEPVELDVSA 109 (358)
T ss_pred CCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhc--cCCCCeEEEECChHHHHHHHHHHHHHHcCCeEEecCcCC
Confidence 346799999999999999999999999998766654443 33557889999999999998888999999998873 3
Q ss_pred CCCHHHHHHHHHHhC--CcEEEehHHHHHHHhcCc-cccCCCCceEEEEecCCCChhhhHHhhhcCCeeeecccCCCCCC
Q 008636 263 KFDAPTVFALIRKHG--VTHMCGAPIVLNLLSSSP-EAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAG 339 (558)
Q Consensus 263 ~~~~~~~~~~i~~~~--~t~l~~~p~~l~~l~~~~-~~~~~~~l~~v~~~g~~l~~~~~~~~~~~~~~v~~~YG~tE~g~ 339 (558)
.+++..+++.+++++ .++...+|..+..++... ....+++++.+++||+++++.+.+.+.+.++++++.||+||+++
T Consensus 110 ~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~v~~~YG~TE~~~ 189 (358)
T PRK07824 110 GFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPAATAALAELDAVLVGGGPAPAPVLDAAAAAGINVVRTYGMSETSG 189 (358)
T ss_pred CcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCccccCCcccceEEEECCCCCCHHHHHHHHhcCCcEEecccCCccCC
Confidence 578999999999998 566677888887776654 23457799999999999999999998888999999999999875
Q ss_pred cccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecccccccccCCchhhccccc
Q 008636 340 VNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419 (558)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~ 419 (558)
.+. ..|.|.+++ ++++.+ |||+++|+.++.||++++..+. ...
T Consensus 190 ~~~---------------------~~G~~~~g~-~v~i~~--------------Gei~v~g~~~~~gY~~~~~~~~-~~~ 232 (358)
T PRK07824 190 GCV---------------------YDGVPLDGV-RVRVED--------------GRIALGGPTLAKGYRNPVDPDP-FAE 232 (358)
T ss_pred CcC---------------------cCceeCCCC-EEEecC--------------CEEEEecCccccccCCCccccc-ccC
Confidence 422 246677777 777722 8999999999999999886432 225
Q ss_pred CCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCCCCCceeEEEEEecCCCCCC
Q 008636 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSG 499 (558)
Q Consensus 420 ~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~ 499 (558)
+|||+|||+|++ ++|.+++.||.||+|+.+|++|+|.+||+.|.++|+|.+++|++.+++..|+.++++++...+..
T Consensus 233 ~g~~~TGDl~~~-~~g~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~vv~~~~~~~g~~~~a~v~~~~~~~-- 309 (358)
T PRK07824 233 PGWFRTDDLGAL-DDGVLTVLGRADDAISTGGLTVLPQVVEAALATHPAVADCAVFGLPDDRLGQRVVAAVVGDGGPA-- 309 (358)
T ss_pred CCceecccEEEE-eCCEEEEEeccCCeEEECCEEECHHHHHHHHHhCCCcceEEEEecCCCCCceEEEEEEEeCCCCC--
Confidence 789999999999 79999999999999999999999999999999999999999999999988999999987765543
Q ss_pred CCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHhh
Q 008636 500 GMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANS 550 (558)
Q Consensus 500 ~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~ 550 (558)
...+++++++++.++.+++|..++++++||+|++||++|++|++++.+
T Consensus 310 ---~~~~~i~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~ 357 (358)
T PRK07824 310 ---PTLEALRAHVARTLDRTAAPRELHVVDELPRRGIGKVDRRALVRRFAG 357 (358)
T ss_pred ---cCHHHHHHHHHhhCccccCCCEEEEecCCCCCCCccccHHHHHHHhhc
Confidence 688899999999999999999999999999999999999999999865
No 120
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=1.7e-45 Score=405.02 Aligned_cols=485 Identities=16% Similarity=0.073 Sum_probs=353.9
Q ss_pred CCCChhhHHHHHhhcCCCCceEEEC---C--ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhh
Q 008636 12 CPLTPLGFIERAATACDDCPSIIYN---D--TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPM 86 (558)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~---~--~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~ 86 (558)
...|+.++|++.++++|+++|+... + +++||+|+.+++.++|.+|.++|+++||+|+|+++|+++|+++++||++
T Consensus 425 ~~~Tl~dll~~~a~~~pd~~al~~~~~~g~~~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~Ewvia~lA~~~ 504 (1452)
T PTZ00297 425 GVRSLGEMWERSVTRHSTFRCLGQTSESGESEWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRNIVILEVACAL 504 (1452)
T ss_pred cCCCHHHHHHHHHHHCCCCeEEEEeccCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 3359999999999999999999742 3 5799999999999999999999999999999999999999999999999
Q ss_pred cCcEEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCch
Q 008636 87 SGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFV 166 (558)
Q Consensus 87 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (558)
+|++.+|+++ +.+++.+++++++++++|++.+....+.+... .....+++++........ ... .......
T Consensus 505 ~GaV~VPly~--t~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~-----~~Lr~IIv~d~~~~~~~~-~~~--~~~~i~~ 574 (1452)
T PTZ00297 505 YGFTTLPLVG--KGSTMRTLIDEHKIKVVFADRNSVAAILTCRS-----RKLETVVYTHSFYDEDDH-AVA--RDLNITL 574 (1452)
T ss_pred cCCEEEeCCC--CHHHHHHHHHhcCCcEEEEchhHHHHHHhhcc-----cCCcEEEEECCCcccccc-ccc--ccCCcce
Confidence 9999999975 35789999999999999998777666555422 136677777531100000 000 0001123
Q ss_pred hhHHHhhcCCCCCCC-CCCCCCCCCceEEEc---cCCCCCCCceeeecHHHHHHHHHhccccc---ccCCCCEEEEecCc
Q 008636 167 DTYENMLAKGDPQFS-WVRPKSDLDPMVLNY---TWGTTSAPKGVVQCYKAFFIIAVDSLIDW---VVPKQSVLLWTLPM 239 (558)
Q Consensus 167 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~---TSGtTG~pk~v~~t~~~~~~~~~~~~~~~---~~~~~~~~~~~~p~ 239 (558)
.+|.++...+..... ......++|++.|+| ||||||.||||++||+++........... ....+|++++.+|+
T Consensus 575 ~s~~~ll~~G~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~~~~~~~D~~Ls~LPL 654 (1452)
T PTZ00297 575 IPYEFVEQKGRLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVLPSSFKKHLMVHFTPF 654 (1452)
T ss_pred eeHHHHHhcCcccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccccCCCCCCEEEEechH
Confidence 567777776532111 112346788999985 99999999999999999988777654322 34678999999999
Q ss_pred hhhhhhhHHHHHHHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc----cc------------------
Q 008636 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP----EA------------------ 297 (558)
Q Consensus 240 ~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~----~~------------------ 297 (558)
+|..+....+.++..|+++.. +++..+++.+++++||++.++|.+|+.+.+.. ..
T Consensus 655 aHI~er~~~~~~l~~G~~I~~---~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~lf~~A~~~k~~ 731 (1452)
T PTZ00297 655 AMLFNRVFVLGLFAHGSAVAT---VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYSWLFERAFQLRSR 731 (1452)
T ss_pred HHHHHHHHHHHHHHcCCEEEe---CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH
Confidence 999997777788889988864 47899999999999999999999998765432 00
Q ss_pred -----c-----------------CCCCceEEEEecCCCChhhhHHhhhcCCeeeecccCCCCCCcccccCCCCCCCCCCh
Q 008636 298 -----K-----------------QLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPA 355 (558)
Q Consensus 298 -----~-----------------~~~~l~~v~~~g~~l~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~ 355 (558)
. -..++|.+++||+ ++........++++..+||.||+.. .... .+
T Consensus 732 ~~~~g~~~~~l~d~LVf~kir~~lGGrlr~~isGga---~~~l~~~l~~~i~i~~g~glTE~~~--~~~~--~~------ 798 (1452)
T PTZ00297 732 LINIHRRDSSLLRFIFFRATQELLGGCVEKIVLCVS---EESTSFSLLEHISVCYVPCLREVFF--LPSE--GV------ 798 (1452)
T ss_pred HHhcCCCCcHHHHHHHHHHHHHHhcCCeEEEEECCC---ccccChHHhCCceEEEecceEEeee--ecCC--CC------
Confidence 0 0246888888873 2222233344678889999999431 1111 00
Q ss_pred hhhhhhcccCCceecccceeeEeCC-CCCcccCCCCCeeeEEEEecccccccccCCchhhcccccCCceeeCceeEEccC
Q 008636 356 RERASLKARQGVRTIGLTEVDIVDP-ETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPD 434 (558)
Q Consensus 356 ~~~~~~~~~~g~~~~~~~~~~i~d~-~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~ 434 (558)
. ...|.|.+++ +++|.+. +.+.. + ..|||+++ |+++|+.|.+. .+||+ +|
T Consensus 799 ---~---~~~G~Plpgv-EvKI~~~~E~~~~---~--~~GEIlvr-------~~kdpe~T~e~-~~gW~---------~d 849 (1452)
T PTZ00297 799 ---F---CVDGTPAPSL-QVDLEPFDEPSDG---A--GIGQLVLA-------KKGEPRRTLPI-AAQWK---------RD 849 (1452)
T ss_pred ---c---ccCCeecCce-EEEEcccccccCC---C--CCCeEEEE-------ECCChHHHHHh-hCcCc---------cC
Confidence 0 1239999998 9999874 22211 1 34999996 45788887764 35664 69
Q ss_pred CcEEEecccCCeee-eCceeechHHHHHHHhcCCCcceeEEEeeeCCCCCceeEEEEEecCCCCC------CC-------
Q 008636 435 GYLEIKDRSKDVII-SGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDS------GG------- 500 (558)
Q Consensus 435 g~l~~~GR~~d~i~-~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~------~~------- 500 (558)
|.|+|+||++|+|| .+|+.|.|+.||+.+...|.|.+++|+|...+. ++|+|+++...-. .+
T Consensus 850 G~L~IidRkKdlikls~GEyVaP~~IE~~l~~sp~I~qi~V~Gd~~k~----lvALVvpd~e~l~~~wa~~~gi~~~~~~ 925 (1452)
T PTZ00297 850 RTLRLLGPPLGILLPVAYEYVIAAELERIFSQSRYVNDIFLYADPSRP----IIAIVSPNRDTVEFEWRQSHCMGEGGGP 925 (1452)
T ss_pred CeEEEEeccccceECCCCcEEcHHHHHHHHhcCCCccEEEEEecCCCc----eEEEEEeCHHHHHHHHHHHcCCCccccc
Confidence 99999999999999 899999999999999999999999999876553 7888887642111 00
Q ss_pred -CCCCHH--------HHHHHH---H--hcCCCccccCeEEEec-cc-----CCCCCCcchhHHHHHHHhhccccc
Q 008636 501 -MMTTEK--------DIIQYC---R--ARIPRYMVPKTVVFID-EL-----PKTATGKVQKYVLGDIANSMSMSH 555 (558)
Q Consensus 501 -~~~~~~--------~l~~~~---~--~~l~~~~~p~~i~~v~-~~-----P~t~~GK~~r~~l~~~~~~~~~~~ 555 (558)
.....+ .+.+.+ . +.+..+.+++.+.+++ +| -+||+.|+.|..+.+.|++.+..-
T Consensus 926 ~~~~~~~el~~~~~~~v~~~i~~V~~~n~l~~~ei~k~~~Ll~~~Ft~enGlLTPTlKlKR~~I~~kY~~~Ie~L 1000 (1452)
T PTZ00297 926 ARQLGWTELVAYASSLLTADFACIAKENGLHPSNVPEYVHLHPHAFKDHSTFLTPYGKIRRDAVHSYFSSVIERF 1000 (1452)
T ss_pred cccCCHHHHHHhHHHHHHHHHHHHHHHhCcCccceeeEEEEeCCCCCCCCCcCChhhhhhHHHHHHHHHHHHHHH
Confidence 001222 232332 1 2256677887777753 44 379999999999999999877653
No 121
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.4e-38 Score=340.72 Aligned_cols=405 Identities=23% Similarity=0.261 Sum_probs=336.1
Q ss_pred CChhhHHHHHhhcCCCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEe
Q 008636 14 LTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNT 93 (558)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 93 (558)
.++...|...+...|+++|+.+.+..+||+++..++.++|+.|.+.|+.++++|+++++.+++++++++|++++|+.++|
T Consensus 227 ~~i~~~f~~~a~~~p~~~a~~~~~~~lty~el~~~a~~la~~l~~~g~~~~~~V~i~~~rs~~~i~~~l~ilkaG~~yvP 306 (642)
T COG1020 227 LTIHLLFEEQAATTPDAVALVRGGQQLTYAELDARANRLARLLISLGVGPGETVAILADRSLELVVALLAVLKAGAAYVP 306 (642)
T ss_pred chHHHHHHHHHHhCCCceeEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCHHHHHHHHHHHhcCCeEec
Confidence 67999999999999999999999999999999999999999999999999999999998899999999999999999999
Q ss_pred ccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhHHHhh
Q 008636 94 INTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENML 173 (558)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (558)
++|..+.+++..+++..+++.+++.......... ... +.......
T Consensus 307 ~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~~----------~~~-~~~~~~~~------------------------ 351 (642)
T COG1020 307 LDPLYPAERLAYILEDSRPTLLLTQAHLRVDDVG----------LPG-LALDDALS------------------------ 351 (642)
T ss_pred CCCCChHHHHHHHHhhcCccEEEecccccccccc----------CCc-cccccccc------------------------
Confidence 9999999999999999999999987322110000 000 00000000
Q ss_pred cCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhhhHHHHHHH
Q 008636 174 AKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAV 253 (558)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~ 253 (558)
.............+++.++++|||||||.||||..+|+++.....+....+.....|+++...++.+......++.++.
T Consensus 352 -~~~~~~~~~~~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~~~~~~d~~l~~~s~~fD~~~~~~f~~l~ 430 (642)
T COG1020 352 -EIPDTDPIPQALLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARFGLDADDRVLALASLSFDASVFEIFGALL 430 (642)
T ss_pred -cCCccCcccccCCCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHHhcCCCcccEEeecCCcccchhHHHHHHHHh
Confidence 0000000011244579999999999999999999999999886667767788999999999999988888899999999
Q ss_pred hcceEEEecC---CCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc----cccCCCCceEEEEecCCCChhhhHHhhhc--
Q 008636 254 VGATNVCLRK---FDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP----EAKQLDRPVRILTAGSPPPAPVLLRTESL-- 324 (558)
Q Consensus 254 ~g~~~~~~~~---~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~----~~~~~~~l~~v~~~g~~l~~~~~~~~~~~-- 324 (558)
.|+++++.+. .++..+...+.++++|++..+|..+..+.... .......++.+++||+.++..+...+...
T Consensus 431 ~G~~l~~~~~~~~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~ 510 (642)
T COG1020 431 EGARLVLAPALLQVDPAALLELLEAQGITVLLLVPLLLRLLLLAALAPDLISPCERLRQLLSGGEALPLALVQRLLQLAA 510 (642)
T ss_pred CCCEEEecCccccCCHHHHHHHHHHcCCEEEEecHHHHHHHHhchhhccccCCcccccEEEEcCCCCCHHHHHHHHHhcc
Confidence 9999999874 57999999999999999999999999998763 11223358999999999999999988743
Q ss_pred -CCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecccc
Q 008636 325 -GFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSL 403 (558)
Q Consensus 325 -~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~ 403 (558)
...+.+.||+||+............. .. ...+|.|..+. .+.|.|. .+..++.+ ..||+++.|.++
T Consensus 511 ~~~~l~~~ygpTe~~~~~~~~~~~~~~--------~~-~~piG~p~~n~-~~~ild~-~~~~~p~g--v~gel~i~g~~~ 577 (642)
T COG1020 511 LARRLLNLYGPTEATLDAPSFPISAEL--------ES-RVPIGRPVANT-QLYILDQ-GLRPLPLG--VPGELYIAGLGL 577 (642)
T ss_pred ccceEeeccCccHHhhheeeEEccccc--------CC-CCCcceeeCCC-eEEEECC-CCCcCCCC--CCeeeEECCcch
Confidence 46899999999955444333211110 01 45789999997 9999994 88899999 789999999999
Q ss_pred cccccCCchhhcccccCC-ceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCC
Q 008636 404 MLGYLKDPEATSKCMKDG-RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHP 467 (558)
Q Consensus 404 ~~gy~~~~~~~~~~~~~g-~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~ 467 (558)
+.||+++|+.+...|... +|+|||++++.++|.+.++||.|+++|++|.+|.+.+||..+.++|
T Consensus 578 a~gy~~~p~lt~~~f~~~~~y~tgD~~r~~~dg~~e~lgr~D~qvki~g~Riel~eie~~l~~~~ 642 (642)
T COG1020 578 ALGYLNRPDLTAERFIALRLYRTGDLARPLADGALEYLGRKDSQVKIRGFRIELGEIEAALAEQP 642 (642)
T ss_pred hhhhcCChhhhHHHhhhccCccCCCeeeECCCCeEEEeccccceeEeceEecCcHHHHHHHhcCC
Confidence 999999999999999664 9999999999999999999999999999999999999999998764
No 122
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=100.00 E-value=2.6e-38 Score=311.43 Aligned_cols=301 Identities=22% Similarity=0.216 Sum_probs=234.6
Q ss_pred hhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccC--CCCEEEEecCchhhh
Q 008636 166 VDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVP--KQSVLLWTLPMFHNN 243 (558)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~ 243 (558)
...|.+++... ..+..++++|||||||.||+|.++|+++..........++.. +.+++++.+|++|..
T Consensus 82 ~~~~~~~~~~~----------~~~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~dr~l~~~Pl~h~~ 151 (386)
T TIGR02372 82 IGEWVDLIAHH----------STPTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKILGERPPPVRRVISCVPAHHLY 151 (386)
T ss_pred HHHHHHHHHhc----------CCCCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHhCcCCCCCCeEEEeCCcHHHH
Confidence 46666666532 224678999999999999999999999987776666666654 346899999999998
Q ss_pred hh-hHHHHHHHhcceEEEecCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCccccCCCCceEEEEecCCCChhhhHHhh
Q 008636 244 GW-SFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAGSPPPAPVLLRTE 322 (558)
Q Consensus 244 g~-~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~~l~~v~~~g~~l~~~~~~~~~ 322 (558)
|+ ..++.++..|+++++...+++..+++.++.+ |++.++|++++.+.+.. ..+++++. ++||+++++++++.+.
T Consensus 152 g~~~~~l~~l~~G~~vv~~~~~~~~~~l~~i~~~--t~~~~~P~~l~~l~~~~--~~l~slr~-i~gGa~l~~~l~~~~~ 226 (386)
T TIGR02372 152 GFLFSCLLPSRRGLEAKQLAAAPASGIMRHARPG--DLIVGTPFIWEQLADLD--YRLPGVVG-VSSGAPSTAATWRCLL 226 (386)
T ss_pred HHHHHHHHHHHCCCeEEecCCCChHHHHHhhccC--CEEEECcHHHHHHHhhC--cCCCccee-EecCCCCCHHHHHHHH
Confidence 87 4567788899999998888888888877643 89999999999997753 34566665 6789999999999998
Q ss_pred hcCC-eeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecc
Q 008636 323 SLGF-IVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGG 401 (558)
Q Consensus 323 ~~~~-~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~ 401 (558)
+.+. .+++.||+||++++++.... ...|.+.++. ++.+ + ++. + .|+
T Consensus 227 ~~g~~~v~~~YG~TEt~~i~~~~~~----------------~~~~~~~p~~-~~~~-~--~~~----------~---~g~ 273 (386)
T TIGR02372 227 AAGLARLLEVYGATETGGIGLREAP----------------DDPFRLLPDL-ACFA-D--TLS----------S---AGL 273 (386)
T ss_pred HhcccchhheeccccccccccccCC----------------CCCcccCCCc-cccC-C--Ccc----------C---CCc
Confidence 7664 68999999999876553210 1234444443 3322 1 110 0 011
Q ss_pred cccccccCCchhhcccccCCceeeCceeEEccCCcEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCCC
Q 008636 402 SLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481 (558)
Q Consensus 402 ~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~ 481 (558)
..|++|||+++++++|.+++.||+||+|+++|++|+|.+||+.|.++|+|.+++|..
T Consensus 274 ------------------~~~~~tgD~g~~d~~G~l~i~GR~dd~Ik~~G~~V~p~eIE~~l~~~p~V~~~~v~~----- 330 (386)
T TIGR02372 274 ------------------ARRLDLQDRLAWDKDGGFTILGRKDEILQVGGVNVSPGHVRDILERNPRVRAAAVRL----- 330 (386)
T ss_pred ------------------cceeecCceEEEcCCCcEEEecccCCEEEECCEEEcHHHHHHHHHcCCCceEEEEEc-----
Confidence 126899999999999999999999999999999999999999999999999999863
Q ss_pred CCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcch
Q 008636 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540 (558)
Q Consensus 482 ~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~ 540 (558)
.++.+.++|++.++... ....+++.+++.+++++|++|..+.++++||+|++||++
T Consensus 331 ~g~~~~a~vv~~~~~~~---~~~~~~l~~~~~~~L~~~~~P~~i~~~~~lP~t~~GKi~ 386 (386)
T TIGR02372 331 DGRRLKAFIVVAEDADE---AELEIELRATAARHLPAPARPDRFRFGTELPRTGAGKLA 386 (386)
T ss_pred CCceEEEEEEECCCCCh---HHHHHHHHHHHHHhCCCCCCCcEEEEcccCCCCCCCCcC
Confidence 35678888888754321 023568999999999999999999999999999999985
No 123
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=100.00 E-value=3.8e-36 Score=304.30 Aligned_cols=322 Identities=19% Similarity=0.180 Sum_probs=237.6
Q ss_pred CCCCceEEEccCCCCCCCceeeecHHHHHHHHHh---cccccccCCCCEEEEecCchhh-hhhhHHHHHHHhcceEEEec
Q 008636 187 SDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVD---SLIDWVVPKQSVLLWTLPMFHN-NGWSFTWGAAVVGATNVCLR 262 (558)
Q Consensus 187 ~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~p~~~~-~g~~~~~~~l~~g~~~~~~~ 262 (558)
+.++++.+++||||||.||++.++|.++..+... ....+++.++|++++..++.+. .++...+.+...|++++.++
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 152 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPIS 152 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecC
Confidence 4557888999999999999999999998654332 2334578889998887665433 33444566777899998887
Q ss_pred CCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCcccc----CCCCceEEEEecCCCChhhhHHhh-hcCCeeeecccCCCC
Q 008636 263 KFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK----QLDRPVRILTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEI 337 (558)
Q Consensus 263 ~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~----~~~~l~~v~~~g~~l~~~~~~~~~-~~~~~v~~~YG~tE~ 337 (558)
..+++.+++.|++++||++.++|+++..|++..... ...++|.++++||+++++.++.++ .+|+++++.||+||+
T Consensus 153 ~~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~~~~lr~i~~~ge~l~~~~~~~i~~~~g~~v~~~YG~tE~ 232 (422)
T TIGR02155 153 GGQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPAQTSLQVGIFGAEPWTNAMRKEIEARLGMKATDIYGLSEV 232 (422)
T ss_pred CCCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcccCceEEEEEeCCcCCHHHHHHHHHHhCCceEecccchhh
Confidence 778899999999999999999999999988754221 234799999999999999999988 469999999999998
Q ss_pred CC--cccccCCCCCCCCCChhhhhhhcccCCceec-ccceeeEeCCCCCcccCCCCCeeeEEEEecccccccccCCchhh
Q 008636 338 AG--VNVSCAWKPKWNKLPARERASLKARQGVRTI-GLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEAT 414 (558)
Q Consensus 338 g~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~ 414 (558)
++ ++..|... ..|.+.. ....++|+|++++.++++| +.|||++++. +
T Consensus 233 ~~~~~~~~~~~~----------------~~g~~~~~~~~~~eivd~~~g~~v~~G--e~Gelvvt~~------------~ 282 (422)
T TIGR02155 233 IGPGVAMECVET----------------QDGLHIWEDHFYPEIIDPHTGEVLPDG--EEGELVFTTL------------T 282 (422)
T ss_pred cCCceeeccccc----------------CCCceEecCeeEEEEECCCCCCCCCCC--CeeEEEEecC------------C
Confidence 53 33332100 1122222 1227789998789999888 7899999973 3
Q ss_pred cccccCCceeeCceeEEccC-C-----cEEEecccCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCCCCCceeEE
Q 008636 415 SKCMKDGRYYTGDVGMMHPD-G-----YLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCA 488 (558)
Q Consensus 415 ~~~~~~g~~~TGD~~~~~~~-g-----~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~ 488 (558)
...|..+||+|||+++++++ | .+++.||.+|+|+.+|.+|+|.+||+.|.++|+|...+++........+.+.+
T Consensus 283 ~~~~p~~ry~TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~~~~~v~~~~q~~~~~~~~~~~~~~ 362 (422)
T TIGR02155 283 KEALPVIRYRTRDLTRLLPGTARTMRRMDRITGRSDDMLIIRGVNVFPTQLEEVILKMDELSPHYQLELTRNGHMDELTL 362 (422)
T ss_pred ccccceeeEEcCcEEEEECCCCCcccccccccCccCCeEEECCEEECHHHHHHHHHhCcCcCCCEEEEEEcCCCccEEEE
Confidence 34456789999999999875 4 46899999999999999999999999999999998444444444443456777
Q ss_pred EEEecCCCCCCC----CCCCHHHHHHHHHhcCCCccccCeEEEe--cccCCCCCCcchhH
Q 008636 489 FVSLKTGTDSGG----MMTTEKDIIQYCRARIPRYMVPKTVVFI--DELPKTATGKVQKY 542 (558)
Q Consensus 489 ~v~~~~~~~~~~----~~~~~~~l~~~~~~~l~~~~~p~~i~~v--~~~P~t~~GK~~r~ 542 (558)
.|+..++..... .....++|.+.+++.+..+. .+.++ ++||+|+ ||+.|.
T Consensus 363 ~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~v~~~~~~~lp~~~-GK~~~~ 418 (422)
T TIGR02155 363 KVELKPESYTLRLHEQASLLAGEIQHTIKQEVGVSM---DVHLVEPGSLPRSE-GKARRV 418 (422)
T ss_pred EEEEecCcccccchHHHHHHHHHHHHHHHhccCcEE---EEEEECCCCccCCC-CCceEE
Confidence 777654422100 00124667778877766552 34444 6999988 999873
No 124
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.1e-32 Score=288.42 Aligned_cols=493 Identities=19% Similarity=0.178 Sum_probs=331.5
Q ss_pred CChhhHHHHHhhcCCCCceEEECC--------ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHh
Q 008636 14 LTPLGFIERAATACDDCPSIIYND--------TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVP 85 (558)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~--------~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~ 85 (558)
-++.+.+.+.+...|.+.+..+.- .++||++.+..++.+++.|...|...|+.|+++|..+.++++..+|++
T Consensus 36 g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~t~r~~~~~~n~~~q~l~~~~~~~~~~v~i~~~~~~d~~v~v~~~~ 115 (1032)
T KOG1178|consen 36 GTLEDSFRRELAEAPENTGHVIIPTASESGIIDSFTYRLIRLLSNIIAQFLVSLGSLRGTTVAIYMLPSVDLVVSVFAVL 115 (1032)
T ss_pred cchhhHHHHHHhhcccCCCceEeecccccccccchhhhhhhcccchhHHHhhhcccccCceEEEeccCcCCeeeeeeehh
Confidence 366667888888888888876621 689999999999999999999999999999999999999999999999
Q ss_pred hcCcEEEeccccCC----hHHH---HHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCC
Q 008636 86 MSGAIFNTINTRLD----ARTI---SIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPP 158 (558)
Q Consensus 86 ~~G~~~v~l~~~~~----~~~l---~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (558)
+.|..+++++|+++ ++.+ ++.+......++.- ............ ....+... .
T Consensus 116 ~~g~~~~~idp~~~~~e~~~~~~~ia~~~~s~~~~i~~~----l~i~~~~~~~~~---~~~sv~~~-~------------ 175 (1032)
T KOG1178|consen 116 AAGLTFLPIDPSWPNSELAGYLMRIAHFLTSVELEIVRR----LNIIDILLNSLF---PKLSVETI-A------------ 175 (1032)
T ss_pred hcceEEEEecCCCcccccchHHHhhhhhheeccceehhh----hhhHHHHhhccc---cccchhhc-c------------
Confidence 99999999999999 3322 22211111111110 000000000000 00000000 0
Q ss_pred CCCCCCchhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecC
Q 008636 159 RIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLP 238 (558)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p 238 (558)
..|..+.... ........-+++.+.+.||||+||.||+|..+|..+.....|....+..+..+++-+...
T Consensus 176 --------~~f~~~~~~~--~~r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f~~t~s~~~~~~~~ 245 (1032)
T KOG1178|consen 176 --------DSFQMVLHNE--DTREIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTFPPTGSDRFTFKTS 245 (1032)
T ss_pred --------chhhhhhccC--CCcceeeecccccceEeecccccccccccchhHHHHHhhhhhccccCCcCccchhhhhhe
Confidence 1111111111 111112345678899999999999999999999999999989888888888887633333
Q ss_pred chhhhhhhHHHHHH-HhcceEEEecC---CCHHHHHHHHHHhCCcEEEehHHHHHHHhcCccc---------------cC
Q 008636 239 MFHNNGWSFTWGAA-VVGATNVCLRK---FDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA---------------KQ 299 (558)
Q Consensus 239 ~~~~~g~~~~~~~l-~~g~~~~~~~~---~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~---------------~~ 299 (558)
.+........+.++ +.|+.+..+.. .++.++.+.+++|+++..+.+|+.++.++..... ..
T Consensus 246 ~~~~d~i~~~~~~~L~~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~~~dl~~~ 325 (1032)
T KOG1178|consen 246 VYFDDTIQKFIGALLFNGNNLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFSLSDLLTK 325 (1032)
T ss_pred eecccchHHHHhhHhhcCceeecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcchhhhhhhhhccccccc
Confidence 33333333444444 45554544433 2478999999999999999999998887665421 12
Q ss_pred CCCceEEEEecCCCChhhhHHhhh-c--CCeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccc---
Q 008636 300 LDRPVRILTAGSPPPAPVLLRTES-L--GFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLT--- 373 (558)
Q Consensus 300 ~~~l~~v~~~g~~l~~~~~~~~~~-~--~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--- 373 (558)
.+.++....+|++....+...+.. + ++... -|+.++..+........+.- .......++..+....
T Consensus 326 ~~~Lkl~~~~~ep~~v~l~~s~~~~~~~~~~~~-~y~s~~~~~~~s~~~~~~s~-------~ll~~~~v~~~p~~~~~~~ 397 (1032)
T KOG1178|consen 326 RSCLKLVVLGGEPLLVSLYTSTFDLLAEIFFGL-PYLSTDPTGLVSYDDFSPSK-------VLLTNENVYSVPKFDSIIG 397 (1032)
T ss_pred chhheeeeecCCccchhhhhhhhhcccceeeee-cccCCCCccceeHHhhCccc-------ceecceeEEeccchhhccC
Confidence 347899999999999988885442 2 33333 38888877665544322211 1111111111111110
Q ss_pred ---eeeEeCCCCCcccCCC--CCeeeEEEEecccccccccCCchhhcccc------cCCceeeCceeEEccCCcEEEecc
Q 008636 374 ---EVDIVDPETGLSVKRD--GQTRGEIVMRGGSLMLGYLKDPEATSKCM------KDGRYYTGDVGMMHPDGYLEIKDR 442 (558)
Q Consensus 374 ---~~~i~d~~~~~~~~~~--~~~~Gel~v~~~~~~~gy~~~~~~~~~~~------~~g~~~TGD~~~~~~~g~l~~~GR 442 (558)
.+.+... .+.+.+.+ .+..|.-...+..+..| +..++.....+ .+..|+|||.|+.-++|.+.+.||
T Consensus 398 ~~~~~~~~~~-~~~~~~~~v~~~~l~~~~~~~~~~~~g-~~~~~~~~~~~~~~d~~~~r~y~tgD~gr~l~ng~l~~~GR 475 (1032)
T KOG1178|consen 398 SLTVLESLYR-AGGEGEGGVGKGCLGAEQNLSSWVVDG-YSTPENFLPNFLTVDGVKARIYRTGDNGRSLKNGGLEISGR 475 (1032)
T ss_pred CCcceeeeec-cCcccCCcccceeecccccccceeecc-ccchhhcCCcccccccchhhcccccccceeecCCCEEEEEe
Confidence 1111111 12111111 11222222223344444 23333322222 345899999999999999999999
Q ss_pred cCCeeeeCceeechHHHHHHHhcCCCcceeEEEeeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCcccc
Q 008636 443 SKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVP 522 (558)
Q Consensus 443 ~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p 522 (558)
.|++||.+|.++.+.+|+..+..+|.|.++.+....+..-++.+++|++......+ .....|+.++.++|+.|++|
T Consensus 476 ~d~qIK~rG~Ri~L~ei~t~v~~~p~v~~~itl~~~~~~~~~~l~aFvv~~~~~~~----~~~~~i~~~l~~~La~y~vP 551 (1032)
T KOG1178|consen 476 ADRQIKDRGVRIELGELNTVVEVHPDVKEAITLARENSTVGQTLLAFVVERGGSKS----VLIRDIRNYLKKELASYMLP 551 (1032)
T ss_pred ccceEEEccEEEehhhhchhhccCcchhhhheeeeeccccCceEEEEEeccCCCCc----hhHHHHHHhhcccccceecc
Confidence 99999999999999999999999999999999999888889999999998777553 35788999999999999999
Q ss_pred CeEEEecccCCCCCCcchhHHHHHHHhh
Q 008636 523 KTVVFIDELPKTATGKVQKYVLGDIANS 550 (558)
Q Consensus 523 ~~i~~v~~~P~t~~GK~~r~~l~~~~~~ 550 (558)
..++.++++|+|++||+|+++|......
T Consensus 552 s~~V~l~~vPl~~~GKvDkkaL~~~~s~ 579 (1032)
T KOG1178|consen 552 SLVVPLAKVPLNPNGKVDKKALLEYNSK 579 (1032)
T ss_pred eEEEEhhhCCcCCCCCcChhhhhhhhhh
Confidence 9999999999999999999999994443
No 125
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.98 E-value=3.5e-29 Score=253.92 Aligned_cols=509 Identities=17% Similarity=0.175 Sum_probs=344.1
Q ss_pred CChhhHHHHHhhcCCCCceEEECC------ccccHHHHHHHHHHHHHHHHhC-CCCCCCEEEEEcCCchhHHHHHHHHhh
Q 008636 14 LTPLGFIERAATACDDCPSIIYND------TTYTWSQTYRRCLQLASSLSSF-GINPGHVVSVIAPNIPAMYELHFAVPM 86 (558)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~------~~~Ty~~l~~~v~~la~~L~~~-Gv~~gd~V~i~~~~~~~~~~~~lA~~~ 86 (558)
.+|.++|++.+..+||.+|+...+ .++||++|..+|.+++..|... -+++||.|++.+++++|++++++||+.
T Consensus 770 ~~ile~Lq~R~a~tp~~~a~~~~n~~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~~Cly 849 (1363)
T KOG3628|consen 770 LTILEILQWRAAKTPDHIAFTTLNARGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIYACLY 849 (1363)
T ss_pred HHHHHHHHHHhhcCCCceEEEEeccCCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHHHHHh
Confidence 689999999999999999998733 6899999999999999999975 579999999999999999999999999
Q ss_pred cCcEEEeccccCC------hHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCC-CCCCCcEEEEcCCccccCCCCCCCC
Q 008636 87 SGAIFNTINTRLD------ARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPP-HSKTPKLVLITDDKEISSSSSPPPR 159 (558)
Q Consensus 87 ~G~~~v~l~~~~~------~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (558)
+|++++|+.|... -..+..+++.+++..|+++......+....-.... ....+.+....+-.. .
T Consensus 850 ~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i~~~~~~~~---------t 920 (1363)
T KOG3628|consen 850 LGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLILVLPKLPE---------T 920 (1363)
T ss_pred cCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhhhcccccch---------h
Confidence 9999999988543 34578899999999999998765554432111000 000111111111000 0
Q ss_pred CCCCCchhhHHHhhcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCc
Q 008636 160 IPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239 (558)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 239 (558)
-.+....+.+.. ......-..++.+|++-+.--++|.--++.++|.++.+.+........+.++.-++.+.+.
T Consensus 921 -----~~k~~~~~~k~~--~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~~l~~~rpl~~~~~~ 993 (1363)
T KOG3628|consen 921 -----IRKRKKNIKKLN--TPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETCQLYKSRPLLGCSSP 993 (1363)
T ss_pred -----hhhhhhhhhccC--CCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHHccccCCceEEEecC
Confidence 001111111111 0111122456789999888888999999999999999988888777777777777777777
Q ss_pred hhhhhh-hHHHHHHHhcceEEEecC----CCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc--cccCCC------CceEE
Q 008636 240 FHNNGW-SFTWGAAVVGATNVCLRK----FDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLD------RPVRI 306 (558)
Q Consensus 240 ~~~~g~-~~~~~~l~~g~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~--~~~~~~------~l~~v 306 (558)
+...|+ ..++...+.|.+.+++++ .+|..+++.+++|++.-++.+-..+....+.. +..+++ +.-.+
T Consensus 994 ~sGlgf~~wcLlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~enl~~~gnn~s~s~v 1073 (1363)
T KOG3628|consen 994 YSGLGFNHWCLLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVENLSKRGNNTSSSIV 1073 (1363)
T ss_pred ccchhHHHHHHHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccchhhhhhccccccee
Confidence 666666 668888899999998875 47899999999999999988888887776543 111111 11223
Q ss_pred EEecCCCChhhhHHhhhc----CC---eeeecccCCCCCCcccccCCCCC-----CCCCChhhhhh-----------hcc
Q 008636 307 LTAGSPPPAPVLLRTESL----GF---IVSHGYGKTEIAGVNVSCAWKPK-----WNKLPARERAS-----------LKA 363 (558)
Q Consensus 307 ~~~g~~l~~~~~~~~~~~----~~---~v~~~YG~tE~g~~~~~~~~~~~-----~~~~~~~~~~~-----------~~~ 363 (558)
+..-+.....+...+.++ |. .+...|+..=.-.++....-++. .+......... ...
T Consensus 1074 v~~~~RPr~ali~sf~klfa~igLsp~avStsys~r~Np~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L~ 1153 (1363)
T KOG3628|consen 1074 VPAEERPRIALIASFKKLFAAIGLSPRAVSTSYSSRVNPFICLRSYSGPEPTTVYLDARALREGRVRLVEVGAPHSLLLY 1153 (1363)
T ss_pred eecCCccHHHHHHHHHHHHHHcCCChhhhcccccccCChHhhhccccCCCCcceeechhhhhccceeeeecCCCCccccc
Confidence 333444444454444432 22 13334444332223322111110 00000000000 001
Q ss_pred cCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecccccccccCCchh-hcccc----------cCCceeeCceeEEc
Q 008636 364 RQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEA-TSKCM----------KDGRYYTGDVGMMH 432 (558)
Q Consensus 364 ~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~-~~~~~----------~~g~~~TGD~~~~~ 432 (558)
..|..++++ ++.|+++++..++..+ +.||||+.+.+.+.+|+...+. ....| ..+|-||||+|+..
T Consensus 1154 dSG~~~~~~-~i~IvnPEtk~pc~dg--e~GEIW~~S~hnA~~~~~~~d~~~~~~fn~rl~~g~~~~~sy~RTG~LGFl~ 1230 (1363)
T KOG3628|consen 1154 DSGKLPVYT-DIAIVNPETKGPCRDG--ELGEIWVNSAHNASCSFTIGDELRSNHFNARLSSGDLLGKSYARTGDLGFLR 1230 (1363)
T ss_pred cCCcccccc-eeEEeCCccccccccC--CcceEEeccccccccccccCchhhhhhhhhhccccccccccceeeeeeeeee
Confidence 225566666 9999999999888888 8999999999998888764221 11222 23599999999984
Q ss_pred c------C----CcEEEecccCCeeeeCceeechHHHHHHHhc-CCCcceeEEEeeeCCCCCceeEEEEEecCCCCCCCC
Q 008636 433 P------D----GYLEIKDRSKDVIISGGENISSTEIESVLYS-HPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGM 501 (558)
Q Consensus 433 ~------~----g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~-~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~ 501 (558)
. + .-+|++|-+++.+.++|-+.+|.+||..+.+ ||.|.+|+|+.. +..+|.++++..+ +
T Consensus 1231 ~t~~t~~~~e~~~~LyVlG~i~EtlEl~GL~h~p~DIE~TV~~vH~~I~~cavF~~-----~glvVvviE~~gq-~---- 1300 (1363)
T KOG3628|consen 1231 RTSLTDANVERHDLLYVLGAIDETLELNGLRHFPSDIETTVERVHPSIGGCAVFQA-----TGLVVVVIECHGQ-Q---- 1300 (1363)
T ss_pred eeecccccceeeeeEEEeecccceeeecCcccCcchHHHHHHHhcccccceeeEee-----CCeEEEEEEecCc-h----
Confidence 2 2 3589999999999999999999999998886 899999999965 3446666776552 2
Q ss_pred CCCHHHHHHHHHhcCCCcc-ccCeEEEec--ccCCCCCCcchhHHHHHHHhhcc
Q 008636 502 MTTEKDIIQYCRARIPRYM-VPKTVVFID--ELPKTATGKVQKYVLGDIANSMS 552 (558)
Q Consensus 502 ~~~~~~l~~~~~~~l~~~~-~p~~i~~v~--~~P~t~~GK~~r~~l~~~~~~~~ 552 (558)
...+-+--.++..|..|. +...+.+|+ .||+++.|..+|..+++.+-...
T Consensus 1301 -~~~~LvPlIv~~vL~eH~iI~dvV~fV~~G~~p~~~~gEK~R~~I~~~w~~~k 1353 (1363)
T KOG3628|consen 1301 -ELADLVPLIVNVVLEEHYIILDVVAFVDKGVFPRNSRGEKQRAHILDSWLAGK 1353 (1363)
T ss_pred -hHhhhhHHHHHHHHhhcceEEEEEEEecCCccccCCchhhHHHHHHHHHHhcc
Confidence 222223333344455555 555677775 69999999999999998765543
No 126
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.97 E-value=5.2e-29 Score=252.02 Aligned_cols=321 Identities=17% Similarity=0.122 Sum_probs=217.9
Q ss_pred CCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhccc---ccccCCCCEEEEecCchhhhhh-hHHHHHHHhcceEEEe
Q 008636 186 KSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLI---DWVVPKQSVLLWTLPMFHNNGW-SFTWGAAVVGATNVCL 261 (558)
Q Consensus 186 ~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~-~~~~~~l~~g~~~~~~ 261 (558)
.+.++++.+++||||||.||+|.+||+++......... ..++.++|+++...|..+..+. ...+++...|++++..
T Consensus 83 ~~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~ 162 (445)
T TIGR03335 83 ADWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPE 162 (445)
T ss_pred CCHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcC
Confidence 34568889999999999999999999998765544333 2478889999999888765554 4445667778876543
Q ss_pred cCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCcccc----CCCCceEEEEecCCCChhhhHHhh-hcCCeeeecccCCC
Q 008636 262 RKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK----QLDRPVRILTAGSPPPAPVLLRTE-SLGFIVSHGYGKTE 336 (558)
Q Consensus 262 ~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~----~~~~l~~v~~~g~~l~~~~~~~~~-~~~~~v~~~YG~tE 336 (558)
. .....++.++++++|.+.++|+.+..|++..... ...++|.+++|||+++++.++.+. .+|+++++.||+||
T Consensus 163 ~--~~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~~~~lr~ii~gGE~l~~~~r~~ie~~~g~~v~~~YG~TE 240 (445)
T TIGR03335 163 G--KCTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPAESSIRRLVVGGESFADESRNYVEELWGCEVYNTYGSTE 240 (445)
T ss_pred C--chhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCcceEEEEcCCCCCHHHHHHHHHHhCCcEEecCChhh
Confidence 3 2356789999999999999999988877644221 235899999999999999988887 46999999999999
Q ss_pred CCCcccccCCCCCCCCCChhhhhhhcccCCceec-ccceeeEeCCCCCcccCCCCCeeeEEEEecccccccccCCchhhc
Q 008636 337 IAGVNVSCAWKPKWNKLPARERASLKARQGVRTI-GLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATS 415 (558)
Q Consensus 337 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~ 415 (558)
++ ++..|... .|...+ ....++|+|++++.++++| +.|||++++-.... ..
T Consensus 241 ~~-~~~~c~~~-----------------~g~h~~~d~~~vEIvDp~~~~~vp~G--e~GELvvT~L~~~~--------~r 292 (445)
T TIGR03335 241 GT-MCGECQAV-----------------AGLHVPEDLVHLDVYDPRHQRFLPDG--ECGRIVLTTLLKPG--------ER 292 (445)
T ss_pred hh-heEEecCC-----------------CCccccCCceEEEEEcCCCCCCCcCC--CceEEEEEecCCCC--------cc
Confidence 85 44444211 122222 1237999999888888888 88999999732110 00
Q ss_pred ccccCCceeeCceeEEcc-C----C----cEEEecccCCeeeeCceeechHHHHHHHhcC---CCcc-eeEEEeeeCCCC
Q 008636 416 KCMKDGRYYTGDVGMMHP-D----G----YLEIKDRSKDVIISGGENISSTEIESVLYSH---PMVN-EAAVVGRPDPFW 482 (558)
Q Consensus 416 ~~~~~g~~~TGD~~~~~~-~----g----~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~---~~v~-~~~v~~~~~~~~ 482 (558)
..+.--+|+|||++++.. + | ++...||.||+++++|.+|+|.+||++|.++ +++. +..++.......
T Consensus 293 ~~~PliRYrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l~~~~~~~~~~~~~~~~~~~~~~~ 372 (445)
T TIGR03335 293 CGSLLINYDTEDTTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRVDVERAVFQRENMDSLTGEYEAFLYGEEEG 372 (445)
T ss_pred CCceEEEeecCceEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHHHHHHHHhccCCCCCCCccEEEEEecCCCC
Confidence 112223699999999732 2 2 2455799999999999999999999999995 5554 344443333222
Q ss_pred CceeEEEEEecCCCCCCCCCCCHHHHHHHHHhc----CCC-------ccccCeEEEe--cccCCC-CCCcchh
Q 008636 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRAR----IPR-------YMVPKTVVFI--DELPKT-ATGKVQK 541 (558)
Q Consensus 483 ~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~----l~~-------~~~p~~i~~v--~~~P~t-~~GK~~r 541 (558)
...+.+.++..+... ...+++.+.+... ++. ..+...+.++ ..+|++ ..||..|
T Consensus 373 ~~~~~v~~e~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~r 440 (445)
T TIGR03335 373 EITLRVSLECEDKDN-----CSIHDIQENFTGTFLKYKPELIGSYDEGIFQILVNFTGPGELELHKIKGRPKR 440 (445)
T ss_pred CceEEEEEEecCccc-----chHHHHHHHHHHHHhhhhhhhhhhhhcceEEEEEEEeCCCCccccccCCCcee
Confidence 223444455544422 2333433333333 221 1222344444 479998 3688766
No 127
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.96 E-value=2.1e-27 Score=227.01 Aligned_cols=321 Identities=23% Similarity=0.203 Sum_probs=235.4
Q ss_pred CCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccc---cccCCCCEEEEecCch-hhhhhhHHHHHHHhcceEEEe
Q 008636 186 KSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLID---WVVPKQSVLLWTLPMF-HNNGWSFTWGAAVVGATNVCL 261 (558)
Q Consensus 186 ~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~-~~~g~~~~~~~l~~g~~~~~~ 261 (558)
...++...|-.||||||+|..+.+|...+..+.....+. .+...+|++..+.... +..|+..-+++--.|++++-.
T Consensus 87 ~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~ 166 (438)
T COG1541 87 VPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPI 166 (438)
T ss_pred ccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEcc
Confidence 344566678889999999999999999987766655554 3677888887766632 333445555666688888877
Q ss_pred cCCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCcccc----CCCCceEEEEecCCCChhhhHHhh-hcCCeeeecccCCC
Q 008636 262 RKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK----QLDRPVRILTAGSPPPAPVLLRTE-SLGFIVSHGYGKTE 336 (558)
Q Consensus 262 ~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~----~~~~l~~v~~~g~~l~~~~~~~~~-~~~~~v~~~YG~tE 336 (558)
.+-+.+..+++++.+++|++.++|+.+..|++..... .-.+++.+++|+|+++++.+..+. .+|+.+++.||+||
T Consensus 167 ~~g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~see~R~~ie~~~g~~~~diYGltE 246 (438)
T COG1541 167 SGGNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSEEMRKVIENRFGCKAFDIYGLTE 246 (438)
T ss_pred CCccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChhhcceeEEEEecccCCHHHHHHHHHHhCCceeecccccc
Confidence 7778899999999999999999999999999887332 334899999999999999999999 67999999999999
Q ss_pred CCCc-ccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEecccccccccCCchhhc
Q 008636 337 IAGV-NVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATS 415 (558)
Q Consensus 337 ~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~ 415 (558)
..+. +..|......+. ....-.++|+||++++.++.| +.|||+++.- +.
T Consensus 247 ~~g~g~~eC~~~~glhi----------------~eD~~~~Ei~dP~t~e~l~dg--e~GelV~T~L------------~~ 296 (438)
T COG1541 247 GFGPGAGECTERNGLHI----------------WEDHFIFEIVDPETGEQLPDG--ERGELVITTL------------TK 296 (438)
T ss_pred ccCCcccccccccCCCc----------------chhhceeeeecCCcCccCCCC--CeeEEEEEec------------cc
Confidence 8776 355553322221 112227999999999999999 8899999972 23
Q ss_pred ccccCCceeeCceeEEccC----C-----cEEEecccCCeeeeCceeechHHHHHHHhcCCCcc-eeEEEeeeCCCCCce
Q 008636 416 KCMKDGRYYTGDVGMMHPD----G-----YLEIKDRSKDVIISGGENISSTEIESVLYSHPMVN-EAAVVGRPDPFWQEI 485 (558)
Q Consensus 416 ~~~~~g~~~TGD~~~~~~~----g-----~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~-~~~v~~~~~~~~~~~ 485 (558)
..++--+|+|||+..+.++ | ..++.||+||++++.|.+|+|.+||+.|.+.+++. +.+++... ...-..
T Consensus 297 ~~~PlIRYrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~~~~~~~~~yqi~~~~-~~~~d~ 375 (438)
T COG1541 297 EGMPLIRYRTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQIERVLLQIPEVTPHYQIILTR-NGGLDE 375 (438)
T ss_pred cCcceEEEEcCCeeEecccCCCCCCccccccccCcccccEEEECCEEeCHHHHHHHHhcccCCCceEEEEEec-CCCCce
Confidence 3333447999999999763 3 24799999999999999999999999999999998 77777776 444556
Q ss_pred eEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCc-cccCe--EEEecccCCCCCCcchh
Q 008636 486 PCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRY-MVPKT--VVFIDELPKTATGKVQK 541 (558)
Q Consensus 486 ~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~-~~p~~--i~~v~~~P~t~~GK~~r 541 (558)
+.+.|++.++.... .....+.+.+...+-.. ..... ++.+.++|||.. |..|
T Consensus 376 L~V~vE~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~v~~v~~g~l~r~~~-K~kr 430 (438)
T COG1541 376 LTVRVELENEAEEL---EDERRLAKKLIKNIKSELGVRVEVELVEPGELPRTEG-KAKR 430 (438)
T ss_pred EEEEEEecCcccch---HHHHHHHHHHHHHHHhhcCCceEEEEEeccceecccC-ceeE
Confidence 77777777652210 12222223333322111 23333 444468999964 6544
No 128
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.94 E-value=1.4e-25 Score=204.54 Aligned_cols=218 Identities=13% Similarity=0.063 Sum_probs=162.7
Q ss_pred HHHHhhcCCCCceEEEC-C-----ccccHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEE
Q 008636 20 IERAATACDDCPSIIYN-D-----TTYTWSQTYRRCLQLASSLSS-FGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFN 92 (558)
Q Consensus 20 l~~~a~~~p~~~a~~~~-~-----~~~Ty~~l~~~v~~la~~L~~-~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (558)
|+..++.+|+++|+++. + +++||+|+.+++.++|++|++ .|+++||+|+|+++|++++++++|||+++|++++
T Consensus 2 ~~~~~~~~p~~~al~~~~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~v~v 81 (227)
T TIGR03089 2 LSPLLAADPASPRLTFYDDATGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGVEVV 81 (227)
T ss_pred hhhhhhhCCCCcEEEEEcCCCCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEE
Confidence 56778889999999752 2 369999999999999999998 7999999999999999999999999999999999
Q ss_pred eccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCchhhHHHh
Q 008636 93 TINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENM 172 (558)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (558)
|++ .++++++|++++....+. . ...+..+......... .. .. ......+.+.
T Consensus 82 p~n-------------~s~a~~~v~~~~~~~~~~-----~-----~~~~~~~~~~~~~~~~-~~--~~--~~~~~~~~~~ 133 (227)
T TIGR03089 82 LAG-------------DPDADVVVTGPDRLAAAA-----G-----SGEVVALSLDPLGRRV-AG--EL--PPGVIDFAPE 133 (227)
T ss_pred eCC-------------CCCCCEEEeCcchhhhcc-----c-----CCceEEEeccccccCC-CC--CC--CCcccchhhh
Confidence 995 678999999887665532 0 1223333211100000 00 00 0012345554
Q ss_pred hcCCCCCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccccccCCCCEEEEecCchhhhhh-hHHHHH
Q 008636 173 LAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGW-SFTWGA 251 (558)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~-~~~~~~ 251 (558)
...............++|+++++||||+ +|.++.... ...++.++|+++ ..|++|.+|+ ..++.+
T Consensus 134 ~~~~~~~~~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~ 199 (227)
T TIGR03089 134 VRVHGDQFAPYEPPDATAPALVAGGGEW---------TGAELVAAA----RAAGLPPGDRVL-VLAWTDLEDFLATLLAP 199 (227)
T ss_pred hhccCCCCCCCCCCCCCcceeeeccccc---------cHHHHHHHH----hhcCCCCCCeEE-ecCCCchHHHHHHHHHH
Confidence 4433232222213456899999999986 555655444 445688999999 9999999998 568899
Q ss_pred HHhcceEEEecCCCHHHHHHHHHHhCCc
Q 008636 252 AVVGATNVCLRKFDAPTVFALIRKHGVT 279 (558)
Q Consensus 252 l~~g~~~~~~~~~~~~~~~~~i~~~~~t 279 (558)
++.|+++++.+++++..+++.|+++|||
T Consensus 200 l~~G~t~v~~~rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 200 LAAGGSLVLVTHPDPARLDQIAETERVT 227 (227)
T ss_pred hccCceEEEecCCCHHHHHHHHHhhcCC
Confidence 9999999999999999999999999997
No 129
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.87 E-value=8.6e-22 Score=189.69 Aligned_cols=121 Identities=23% Similarity=0.213 Sum_probs=111.6
Q ss_pred ccCCceeeCceeEE-ccCCcEEEecccCCeeeeCc---eeechHHHHHHHhcCCCcceeEEEeeeCCCCCceeEEEEEec
Q 008636 418 MKDGRYYTGDVGMM-HPDGYLEIKDRSKDVIISGG---ENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLK 493 (558)
Q Consensus 418 ~~~g~~~TGD~~~~-~~~g~l~~~GR~~d~i~~~G---~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~ 493 (558)
+.+|||+|||+|++ |++|+|++.||.+ +| .+|+|. ||++|.++|+|.+|+|++++++.+|+.++++|++.
T Consensus 206 ~~dgW~~TGDlg~~~d~dG~l~~~gR~~-----~G~~i~nV~p~-IE~~L~~hp~V~eaaVvgvpd~~~ge~v~A~Vv~~ 279 (365)
T PRK09188 206 PSRIWLATGKKVYNFITRGLFSWSDGEG-----TGDRIDNEAPA-IQAALKSDPAVSDVAIALFSLPAKGVGLYAFVEAE 279 (365)
T ss_pred ccCcEEeCCCEEEEEcCCCeEEEEecCc-----CCcCceeeCHH-HHHHHHhCCCccEEEEEEEEcCCCCeEEEEEEEEC
Confidence 46899999999998 6999999999998 77 799999 99999999999999999999999999999999876
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcCCCccccCeEEEecccCCCCCCcchhHHHHHHHhhcc
Q 008636 494 TGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSMS 552 (558)
Q Consensus 494 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK~~r~~l~~~~~~~~ 552 (558)
.. .+.++++++++++|+. ++|..++++++||+|++||++|+.|+++..+..
T Consensus 280 ~~-------~~~~el~~~l~~~L~~-kvP~~v~~v~~lP~t~~GKi~R~~Lr~~~~~~~ 330 (365)
T PRK09188 280 LP-------ADEKSLRARLAGAKPP-KPPEHIQPVAALPRDADGTVRDDILRLIAMNQI 330 (365)
T ss_pred CC-------CCHHHHHHHHHhhchh-cCCcEEEEECCCCCCCCCCccHHHHHHHhhccc
Confidence 32 5778999999999999 999999999999999999999999999875543
No 130
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.85 E-value=1.3e-19 Score=185.05 Aligned_cols=498 Identities=17% Similarity=0.121 Sum_probs=327.3
Q ss_pred ChhhHHHHHhhcCCCCceEEECC-----ccccHHHHHHHHHHHHH-HHHhCCCCCCCEEEEEcCCc--hhHHHHHHHHhh
Q 008636 15 TPLGFIERAATACDDCPSIIYND-----TTYTWSQTYRRCLQLAS-SLSSFGINPGHVVSVIAPNI--PAMYELHFAVPM 86 (558)
Q Consensus 15 tl~~~l~~~a~~~p~~~a~~~~~-----~~~Ty~~l~~~v~~la~-~L~~~Gv~~gd~V~i~~~~~--~~~~~~~lA~~~ 86 (558)
.+...++..-.+++...|.++.+ ..+||..+..++.+.|+ .|.+-|+.++|+|.+++..+ .++++..++|..
T Consensus 95 d~~avl~~~~nhs~~~ta~i~id~kgk~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~~isl~gc~l 174 (1363)
T KOG3628|consen 95 DIIAVLRYRRNHSATSTAHICIDKKGKATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRKCEAIEFLISLFGCFL 174 (1363)
T ss_pred chHHHHHhhccCCCCCceEEEEcCCCceeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEhhhhhHHhhhhccccc
Confidence 35556666667788888887733 68999999999999999 77778999999999988775 799999999999
Q ss_pred cCcEEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEEEcCCccccCCCCCCCCCCCCCch
Q 008636 87 SGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFV 166 (558)
Q Consensus 87 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (558)
.|.+.+|+.+..+.+++..+++..+.+++++.......+.... ...+ ..+. +
T Consensus 175 ~g~~~vp~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~---~~~s-~~k~------------------------v 226 (1363)
T KOG3628|consen 175 LGIVAVPLSELSSSEELKDIVNPTPERVALTTEAGERAFINDN---SPVS-LAKA------------------------V 226 (1363)
T ss_pred cceeeccchhhhhhhhhhcccCCCccceEeehhhhHHHhhhcc---Cccc-HHHH------------------------H
Confidence 9999999999999999999999999999998776554443322 0000 0000 1
Q ss_pred hhHHHhhcCCC--CCCCCCCCCCCCCceEEEccCCCCCCCceeeecHHHHHHHHHhccc--------------------c
Q 008636 167 DTYENMLAKGD--PQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLI--------------------D 224 (558)
Q Consensus 167 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~--------------------~ 224 (558)
..|....-.+. .+.....+..- ...+|-||.+++|+--+++++|+ +..+.+.... .
T Consensus 227 ~~w~t~~~k~~~~~~k~~~P~~~~-~~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v 304 (1363)
T KOG3628|consen 227 AWWKTNDFKGNYTKDKIKKPRMQL-PYGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHV 304 (1363)
T ss_pred HhhhcccccceeehhhccCCceee-eeEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhc
Confidence 11111000000 00000011122 27789999999999999999988 4333322211 1
Q ss_pred cccCCCCEEEEecCchhhhhh-hHHHHHHHhcceEEEecC---CCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc-----
Q 008636 225 WVVPKQSVLLWTLPMFHNNGW-SFTWGAAVVGATNVCLRK---FDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP----- 295 (558)
Q Consensus 225 ~~~~~~~~~~~~~p~~~~~g~-~~~~~~l~~g~~~~~~~~---~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~----- 295 (558)
+....++.++...-.....|+ ..++.++++|.|.+.+++ ..|..+.+++-+++.+++..--..|+.....-
T Consensus 305 ~~~~~~~~~l~~~~~s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~p~ 384 (1363)
T KOG3628|consen 305 FPVPSEDVLLTNLDPSQQLGLILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQEDPK 384 (1363)
T ss_pred cccCcccceeeccCcccccchhhhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEEEeecccccCcccccccCCcc
Confidence 123344555555555555565 447789999999999986 67889999999999999988766665543221
Q ss_pred --------cccCCCCceEEEEecCCCChhhhHHhh----h-cCC------------------eeeecccCCCCCCccccc
Q 008636 296 --------EAKQLDRPVRILTAGSPPPAPVLLRTE----S-LGF------------------IVSHGYGKTEIAGVNVSC 344 (558)
Q Consensus 296 --------~~~~~~~l~~v~~~g~~l~~~~~~~~~----~-~~~------------------~v~~~YG~tE~g~~~~~~ 344 (558)
...+++++|.+++.-..+..+..+-.. + +|. -....=+.+|.+......
T Consensus 385 a~~s~~k~~t~d~sslk~C~Vtc~~vd~~~~~ivs~~wlk~lg~~~~~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~r~ 464 (1363)
T KOG3628|consen 385 ATLSFKKYKTPDLSSLKGCMVTCTAVDTEFQEIVSDRWLKPLGETNVKVVDFPILCLLWHGGIPISFKDWMEIGTVSIRR 464 (1363)
T ss_pred cccchhhccCCCccceeeeEEeeeecchHHHHHHHHhhcccccCcCcceeechhhhhhhcCceEEEeccchhhhcccccC
Confidence 123578999999999999887665432 1 222 112222234444433332
Q ss_pred CCCCCCCCCChh------------------h--hhhhcccCCceecccceeeEeCCCCCcccCCCCCeeeEEEEeccccc
Q 008636 345 AWKPKWNKLPAR------------------E--RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLM 404 (558)
Q Consensus 345 ~~~~~~~~~~~~------------------~--~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~ 404 (558)
+... -...+.+ . .......+|...++...+.++++++...+..+ ++|||||.++++.
T Consensus 465 p~~~-~~~~~~e~ll~~~~L~~~~V~v~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~~LC~~~--eVGEIwVsS~~~~ 541 (1363)
T KOG3628|consen 465 PEQM-ADTLPGEGLLSKEALKLNEVEVDTEDDISSLSVKDVLCIMPGDATLAVVNPDTNQLCKTD--EVGEIWVSSNSLG 541 (1363)
T ss_pred cccc-cccCccceeeeccccccceEEEcchhhhhhcCccccceecccceEEEEeCCCcccccccC--cceeEEEecCCcc
Confidence 2200 0000000 0 00111245666666668889999888888888 8999999999999
Q ss_pred ccccCCchhhccccc-------------CCceeeCceeEEccCCcEEEecccCCeee-eCceeechHH----------HH
Q 008636 405 LGYLKDPEATSKCMK-------------DGRYYTGDVGMMHPDGYLEIKDRSKDVII-SGGENISSTE----------IE 460 (558)
Q Consensus 405 ~gy~~~~~~~~~~~~-------------~g~~~TGD~~~~~~~g~l~~~GR~~d~i~-~~G~~v~~~~----------iE 460 (558)
++||..+..+...|. .-++|||-+|+++ +|.++++|-++|.+. ..|...+..+ ++
T Consensus 542 ~~~~al~~~t~~~F~~~~~~s~~~~~~n~~FmRtGLlGFv~-~gki~vl~~k~d~llq~~~~~h~~d~iv~thya~~~ik 620 (1363)
T KOG3628|consen 542 KLFYALDKQTENTFKATPVESSGKPPSNVPFMRTGLLGFVH-NGKIYVLGLKEDGLLQVSGWRHNADDIVATHYAVELIK 620 (1363)
T ss_pred cceeeccccccceEEeeeccccCCCCccchhhhhcceeeee-CCeEEEEEechhhhhhhhhhhhhhhhhHhhHHHHHHHH
Confidence 999998877776661 1389999999999 666777777777776 7777766544 33
Q ss_pred HHHhcCCCcceeEEEeeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcC-CCccccC-eEEE--ecccCCCCC
Q 008636 461 SVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARI-PRYMVPK-TVVF--IDELPKTAT 536 (558)
Q Consensus 461 ~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l-~~~~~p~-~i~~--v~~~P~t~~ 536 (558)
-+.+..+.|.++.++- .++++.+++-++...++ +.-+....+-+.+ .-|++-. .+.+ -+.+|||+-
T Consensus 621 tV~R~v~~VF~~saf~------~E~~~Vv~~esP~a~e~----~~~q~~~~v~q~l~~iHqv~vyCilivP~~tLPrt~~ 690 (1363)
T KOG3628|consen 621 TVMRGVIAVFDVSAFE------DEHIVVVVLESPDATEE----NSFQWMSRVFQALDSIHQVGVYCILIVPANTLPRTPL 690 (1363)
T ss_pred HHHhccceEEEEeeee------cceEEEEEEeCcchhhh----hhhhHHHHHHHHHHHHhcccceEEEEeccccCCCccc
Confidence 4445567788888884 44566666655554322 2212222222222 2222222 2333 378999997
Q ss_pred CcchhHHHHHHHhhcccccC
Q 008636 537 GKVQKYVLGDIANSMSMSHS 556 (558)
Q Consensus 537 GK~~r~~l~~~~~~~~~~~~ 556 (558)
|-+.-...++.|.+++++.+
T Consensus 691 ~Gi~~~~~k~~F~~G~L~~~ 710 (1363)
T KOG3628|consen 691 GGIHNNECKQAFLEGSLPPS 710 (1363)
T ss_pred cccccHHHHHHHHcCCCCcc
Confidence 77999999999999998765
No 131
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.81 E-value=8e-18 Score=166.23 Aligned_cols=244 Identities=14% Similarity=0.114 Sum_probs=162.4
Q ss_pred CceEEEccCCCCCCCceeeecHHHHHHHHHhccc---ccccCCCCEEEEecCchhhhhhhHHHHHHHhcce-EEEec-CC
Q 008636 190 DPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLI---DWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGAT-NVCLR-KF 264 (558)
Q Consensus 190 ~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~-~~~~~-~~ 264 (558)
....+..||||||.|-.++.+......+...... ..++..++++.....- .+ .++.++..... +...+ ..
T Consensus 100 ~~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~~~---~~--~ly~~~~~~~~~~~~~~l~~ 174 (430)
T TIGR02304 100 GNISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFLRA---DN--NLYQSVNNRWISLDFFDLLA 174 (430)
T ss_pred CcEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEEcc---Ch--hHHHHHHhccceeeecCCCc
Confidence 3456778999999999999999877544332222 1244555555544211 00 11122222111 22222 24
Q ss_pred CHHHHHHHHHHhCCcEEEehHHHHHHHhcCccccCC-CCceEEEEecCCCChhhhHHhh-hcCCeeeecccCCCCCCccc
Q 008636 265 DAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL-DRPVRILTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNV 342 (558)
Q Consensus 265 ~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~-~~l~~v~~~g~~l~~~~~~~~~-~~~~~v~~~YG~tE~g~~~~ 342 (558)
+.+.+++.|++++|+++.++|+.+..|++......+ .+++.++++||.+++..++.++ .+|+++++.||+|| |.++.
T Consensus 175 ~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~~~~k~ii~~~E~l~~~~r~~Ie~~fg~~V~~~YG~tE-g~la~ 253 (430)
T TIGR02304 175 PFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELTIKPKKVISVAEVLEPQDRELIRNVFKNTVHQIYQATE-GFLAS 253 (430)
T ss_pred CHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCCCCceEEEEccCCCCHHHHHHHHHHhCCCeeEccCCch-hheEE
Confidence 688999999999999999999999999987633332 4799999999999999999888 56999999999999 77777
Q ss_pred ccCCCCCCCCCChhhhhhhcccCCceecccceee--EeCCCCCcccCCCCCeeeEEEEecccccccccCCchhhcccccC
Q 008636 343 SCAWKPKWNKLPARERASLKARQGVRTIGLTEVD--IVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420 (558)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~ 420 (558)
.|..+ .++ .......++ ++|++ + .++.+||+- ....++-
T Consensus 254 eC~~g-~lH----------------l~ed~~~vE~~ivD~~-~---------~~~~ViT~L------------~n~~~Pl 294 (430)
T TIGR02304 254 TCRCG-TLH----------------LNEDLVHIEKQYLDEH-K---------RFVPIITDF------------TRTTQPI 294 (430)
T ss_pred ecCCC-CEE----------------EccccEEEEeeEECCC-C---------ceEEEEecC------------CCccceE
Confidence 76422 111 222222444 78863 2 145577752 2222223
Q ss_pred CceeeCceeEEccC----Cc----E-EEecccCCeeee---Ccee--echHHHHHHH-hcCCCcceeEEEeee
Q 008636 421 GRYYTGDVGMMHPD----GY----L-EIKDRSKDVIIS---GGEN--ISSTEIESVL-YSHPMVNEAAVVGRP 478 (558)
Q Consensus 421 g~~~TGD~~~~~~~----g~----l-~~~GR~~d~i~~---~G~~--v~~~~iE~~l-~~~~~v~~~~v~~~~ 478 (558)
-+|+|||++...++ |. + .+.||.+|+++. +|.. ++|..++..+ ...++|.+.+++...
T Consensus 295 IRYrtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~~~i~~yQi~Q~~ 367 (430)
T TIGR02304 295 VRYRLNDILVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILFTLPLIVEYRVLQTG 367 (430)
T ss_pred EeeeCCCEEEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHhcCCCCceEEEEEcc
Confidence 36999999888543 32 3 489999999984 4544 5899998874 457899999988643
No 132
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B ....
Probab=99.26 E-value=9.1e-12 Score=91.47 Aligned_cols=70 Identities=56% Similarity=0.836 Sum_probs=61.1
Q ss_pred HHHHHHhcCCCcceeEEEeeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHhcCCCccccC--eEEEecc-cCCC
Q 008636 458 EIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPK--TVVFIDE-LPKT 534 (558)
Q Consensus 458 ~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~--~i~~v~~-~P~t 534 (558)
|||+.|.++|+|.+|+|++.+++..|+.+++++++ +.++|+++++++|+.|+.|+ .++.+++ ||+|
T Consensus 1 EIE~~l~~~~~V~~~~V~~~~d~~~g~~l~a~vv~-----------~~~~i~~~~~~~l~~~~~P~~~~~v~~~~~lP~t 69 (73)
T PF13193_consen 1 EIESVLRQHPGVAEAAVVGVPDEDWGERLVAFVVL-----------DEEEIRDHLRDKLPPYMVPRRIRFVRLDEELPRT 69 (73)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEETTTEEEEEEEEEE-----------HHHHHHHHHHHHS-GGGS-SEEEEEEESSSEEBE
T ss_pred CHHHHHhcCCCccEEEEEEEEcccccccceeEEEe-----------eecccccchhhhCCCcceeeEEEEccccCcCCCC
Confidence 69999999999999999999999999999999987 33899999999999999995 5555577 9999
Q ss_pred CCCc
Q 008636 535 ATGK 538 (558)
Q Consensus 535 ~~GK 538 (558)
++||
T Consensus 70 ~~GK 73 (73)
T PF13193_consen 70 PSGK 73 (73)
T ss_dssp TTSS
T ss_pred CCCC
Confidence 9998
No 133
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.86 E-value=1.7e-07 Score=91.01 Aligned_cols=223 Identities=19% Similarity=0.208 Sum_probs=132.3
Q ss_pred CCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcc---cccc-cCCC-CEEEEecCchhh-hhh----hHHHHHHHhcc
Q 008636 187 SDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSL---IDWV-VPKQ-SVLLWTLPMFHN-NGW----SFTWGAAVVGA 256 (558)
Q Consensus 187 ~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~---~~~~-~~~~-~~~~~~~p~~~~-~g~----~~~~~~l~~g~ 256 (558)
+.+++..++.||||||.|.-+.+.+..+..+..... +.+. .... -.++...|-... ..+ .........+.
T Consensus 87 ~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (365)
T PF04443_consen 87 PEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFGS 166 (365)
T ss_pred ChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccCc
Confidence 345677889999999998778787776654443222 2222 2221 223333443221 111 11222233444
Q ss_pred eEEEec--CCCHHHHHHHHH----HhCCcEEEehHHHHHHHhcCcc----ccCCC-CceEEEEec------CCCCh-hhh
Q 008636 257 TNVCLR--KFDAPTVFALIR----KHGVTHMCGAPIVLNLLSSSPE----AKQLD-RPVRILTAG------SPPPA-PVL 318 (558)
Q Consensus 257 ~~~~~~--~~~~~~~~~~i~----~~~~t~l~~~p~~l~~l~~~~~----~~~~~-~l~~v~~~g------~~l~~-~~~ 318 (558)
. ..+. .++.+.++..+. +.++..++++|.++-.++...+ ...++ ..+.+-.|| +.++. ++.
T Consensus 167 ~-~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~r~ef~ 245 (365)
T PF04443_consen 167 R-FALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVSREEFY 245 (365)
T ss_pred e-eeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccCHHHHH
Confidence 4 3443 356777666664 4568889998887766655442 22333 334444553 34543 444
Q ss_pred HHhhh-cCC----eeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceeeEeCCCCCcccCCCCCee
Q 008636 319 LRTES-LGF----IVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTR 393 (558)
Q Consensus 319 ~~~~~-~~~----~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~ 393 (558)
..+.+ +|+ .+++.||+||.....+.|..... +.+. .+.|.|+++..+++.| +.
T Consensus 246 ~~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~~~~~~------------------~~p~--wV~iRDp~tl~~~~~G--e~ 303 (365)
T PF04443_consen 246 ARLQEVFGVIPIENIYDMYGMTELNSQAYECGHGHF------------------HVPP--WVIIRDPETLEPLPPG--ET 303 (365)
T ss_pred HHHHHHHCCCCHHHeeeeeeccccchhheeCCCCcc------------------cCCC--eEEEECCCCCcCCCCC--Ce
Confidence 55554 687 69999999998877666532110 2222 3677799999999998 78
Q ss_pred eEEEEecccccccccCCchhhcccccCCceeeCceeEEccC--------CcEEEecccCC
Q 008636 394 GEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPD--------GYLEIKDRSKD 445 (558)
Q Consensus 394 Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~--------g~l~~~GR~~d 445 (558)
|-|-+-.+.... | .+..-|.|+|.++.+ .++.++||.+.
T Consensus 304 Gli~vidl~~~s-~------------p~~IlTeDlGvl~~~~~c~cr~g~~f~vlGR~~~ 350 (365)
T PF04443_consen 304 GLIQVIDLANTS-Y------------PGFILTEDLGVLHGDDDCGCRKGKYFEVLGRADG 350 (365)
T ss_pred eEEEEEcccccC-C------------CcEEEEcceeeecCCCCCCCccCCEEEEEeCCCC
Confidence 999887653221 1 234679999988654 26999999775
No 134
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=98.45 E-value=5.6e-06 Score=85.41 Aligned_cols=177 Identities=16% Similarity=0.154 Sum_probs=96.1
Q ss_pred CCCceEEEEecCCCChhhhHHhhhc--C-CeeeecccCCCCCCcccccCCCCCCCCCChhhhhhhcccCCceecccceee
Q 008636 300 LDRPVRILTAGSPPPAPVLLRTESL--G-FIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVD 376 (558)
Q Consensus 300 ~~~l~~v~~~g~~l~~~~~~~~~~~--~-~~v~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 376 (558)
.++++.|.+.+..-...-...+++. + ..+...|++||+ .+++.-... ...+...+....++
T Consensus 266 WP~L~~v~~~~~g~~~~y~~~l~~~~g~~~~~~~~y~ASEg-~i~i~~~~~---------------~~~~~l~~~~~ffE 329 (528)
T PF03321_consen 266 WPNLKLVSCWGGGSMAPYAPKLREYFGGVPIQSKGYGASEG-FIGIPLDPE---------------DPGYVLAPDSGFFE 329 (528)
T ss_dssp STT--EEEEE-SGGGGGGHHHHHHHHTTS-EEE-EEEETTE-EEEEES-CC---------------C--EEE-TTSSEEE
T ss_pred CCCCcEEEEEcCCChHHHHHHHHHHcCCCceeeccccccce-EEEEecCCC---------------CCceEeecCCeEEE
Confidence 5688866665555455555555533 3 345678999994 444432100 01111222222334
Q ss_pred EeCCCC--------C-----cccCCCCCeeeEEEEecccccccccCCchhhcccccCCceeeCceeEEcc--CC--cEEE
Q 008636 377 IVDPET--------G-----LSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHP--DG--YLEI 439 (558)
Q Consensus 377 i~d~~~--------~-----~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~--~g--~l~~ 439 (558)
.++.++ . .++..| +.-||++++. .|.| +|+.||++++.. ++ .+.|
T Consensus 330 Fip~~~~~~~~~~~~~~l~~~ele~G--~~YelviTt~---~GLy-------------RY~iGDvVrv~gf~~~~P~i~F 391 (528)
T PF03321_consen 330 FIPVDEDEQNPSEQPKTLLLHELEVG--EEYELVITTN---SGLY-------------RYRIGDVVRVTGFYNQTPRIEF 391 (528)
T ss_dssp EEE-STT-------SSSEEGGG--TT---EEEEEEEST---TS-S-------------SEEECEEEEEEEEETTEEEEEE
T ss_pred EEeccCCcccccCCCceecHHHhcCC--CeEEEEEecc---ccee-------------eeecCCEEEEeeccCCCcEEEE
Confidence 433322 1 144555 6789999974 2222 599999999853 33 7999
Q ss_pred ecccCCeeeeCceeechHHHHHHHhcC-----CCcceeEEEeeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHh
Q 008636 440 KDRSKDVIISGGENISSTEIESVLYSH-----PMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRA 514 (558)
Q Consensus 440 ~GR~~d~i~~~G~~v~~~~iE~~l~~~-----~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~ 514 (558)
.||.+.++.+.|++++-.++++++.+. -.+.+..+...........-+.++++.... .+.+.+.+.+.+
T Consensus 392 ~~R~~~~l~l~gEkl~e~~v~~av~~~~~~~~~~~~~f~~~~~~~~~~~~~Y~~~~e~~~~~------~~~~~~~~~lD~ 465 (528)
T PF03321_consen 392 VGRRGQVLSLFGEKLSEEQVQEAVARALQETGLELRDFTVAPDPSSGNPPHYVLFWELEGEP------DDLEELAKALDE 465 (528)
T ss_dssp EEETTEEE-SSS--EEHHHHHHHHHHHHHCTT-EEEEEEEEEE--SSSSBEEEEEEEECS-H------HHHHHHHHHHHH
T ss_pred eccCCceeecceeecCHHHHHHHHHHHHHhcCCceeeEEEEeecccCCCCceEEEEEeCCCc------hHHHHHHHHHHH
Confidence 999999999999999999999988875 235677777653222233445556655441 244556666655
Q ss_pred cC
Q 008636 515 RI 516 (558)
Q Consensus 515 ~l 516 (558)
.|
T Consensus 466 ~L 467 (528)
T PF03321_consen 466 SL 467 (528)
T ss_dssp CS
T ss_pred Hh
Confidence 55
No 135
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=97.77 E-value=0.002 Score=67.04 Aligned_cols=62 Identities=15% Similarity=0.235 Sum_probs=49.4
Q ss_pred cCCCCCeeeEEEEecccccccccCCchhhcccccCCceeeCceeEEcc----CCcEEEecccCCeeeeCceeechHHHHH
Q 008636 386 VKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHP----DGYLEIKDRSKDVIISGGENISSTEIES 461 (558)
Q Consensus 386 ~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~l~~~GR~~d~i~~~G~~v~~~~iE~ 461 (558)
++.| +.-+|+|++. .|.| +|+.||..++.. -..|.|+||.+.++.+.|++++-.+++.
T Consensus 391 Ve~G--~~Y~lVvTT~---~GLy-------------RY~iGDvVrvtgf~~~~P~i~F~gR~~~~ls~~GEKl~e~~v~~ 452 (597)
T PLN02249 391 VEVG--KEYELVITTY---AGLY-------------RYRVGDILRVTGFHNSAPQFKFIRRKNVLLSIESDKTDEADLQK 452 (597)
T ss_pred cCCC--CeEEEEEEcc---ccee-------------EeecCCEEEEeeccCCCcEEEEEccCCcceecccccCCHHHHHH
Confidence 4445 6688998863 2222 489999999863 3579999999999999999999999999
Q ss_pred HHhc
Q 008636 462 VLYS 465 (558)
Q Consensus 462 ~l~~ 465 (558)
++.+
T Consensus 453 Av~~ 456 (597)
T PLN02249 453 AVEN 456 (597)
T ss_pred HHHH
Confidence 8877
No 136
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=97.73 E-value=0.0067 Score=62.68 Aligned_cols=63 Identities=19% Similarity=0.231 Sum_probs=49.0
Q ss_pred cCCCCCeeeEEEEecccccccccCCchhhcccccCCceeeCceeEEc----cCCcEEEecccCCeeeeCceeechHHHHH
Q 008636 386 VKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMH----PDGYLEIKDRSKDVIISGGENISSTEIES 461 (558)
Q Consensus 386 ~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~----~~g~l~~~GR~~d~i~~~G~~v~~~~iE~ 461 (558)
++.| +.-||+|++. .|.| +||.||+.++. .-..|.|++|.+.+..+.|.|.+-.++..
T Consensus 398 vk~G--~~YelVvTt~---~GLY-------------RYrlGDvv~V~GF~n~~P~~~Fv~R~~~vlsi~gEK~tE~~l~~ 459 (606)
T PLN02247 398 VKVG--HYYELVVTTF---TGLY-------------RYRVGDILMVTGFYNNAPQFRFVQRRNVVLSIDTDKTNEEDLLK 459 (606)
T ss_pred ccCC--CeEEEEEEec---CceE-------------EEecCCEEEEeeecCCCceEEEEecCCceeecccccCCHHHHHH
Confidence 4444 6688998862 1222 58999999985 34689999999998899999999999888
Q ss_pred HHhcC
Q 008636 462 VLYSH 466 (558)
Q Consensus 462 ~l~~~ 466 (558)
++.+.
T Consensus 460 Av~~a 464 (606)
T PLN02247 460 AVTQA 464 (606)
T ss_pred HHHHH
Confidence 77763
No 137
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=97.37 E-value=0.012 Score=60.83 Aligned_cols=63 Identities=21% Similarity=0.237 Sum_probs=48.6
Q ss_pred cCCCCCeeeEEEEecccccccccCCchhhcccccCCceeeCceeEEc----cCCcEEEecccCCeeeeCceeechHHHHH
Q 008636 386 VKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMH----PDGYLEIKDRSKDVIISGGENISSTEIES 461 (558)
Q Consensus 386 ~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~----~~g~l~~~GR~~d~i~~~G~~v~~~~iE~ 461 (558)
++.| +.-|++|++. .|.| +||.||+.++. ....|.|++|.+-+..+.|.|.+-.++..
T Consensus 404 v~~G--~~YelvvTt~---~GLy-------------RYrlGDvv~V~Gf~n~~P~~~Fv~R~~~~lsi~gEK~tE~~l~~ 465 (612)
T PLN02620 404 VKLG--QEYELVVTTY---AGLY-------------RYRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQN 465 (612)
T ss_pred ccCC--CeEEEEEEec---CceE-------------EEecCCEEEEeeecCCCceEEEEeecCceeecccccCCHHHHHH
Confidence 4444 6689999863 1222 58999999985 34689999999988899999999999887
Q ss_pred HHhcC
Q 008636 462 VLYSH 466 (558)
Q Consensus 462 ~l~~~ 466 (558)
++.+.
T Consensus 466 Av~~a 470 (612)
T PLN02620 466 AVKNA 470 (612)
T ss_pred HHHHH
Confidence 77653
No 138
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=97.37 E-value=0.00042 Score=53.58 Aligned_cols=86 Identities=24% Similarity=0.352 Sum_probs=49.9
Q ss_pred ceeechHHHHHHHhcCCCcc-eeEEEeeeCCCCCceeEEEEEecCCCCCC--CCCCCHHHHHHHHHhcCCCccccCeEEE
Q 008636 451 GENISSTEIESVLYSHPMVN-EAAVVGRPDPFWQEIPCAFVSLKTGTDSG--GMMTTEKDIIQYCRARIPRYMVPKTVVF 527 (558)
Q Consensus 451 G~~v~~~~iE~~l~~~~~v~-~~~v~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~l~~~~~~~l~~~~~p~~i~~ 527 (558)
|.+|+|.+||++|.++|++. +.+++.... .....+.+.|++.++..++ +.....+.+.+.+++.+. +.-.+.+
T Consensus 1 GvnvfP~~Ie~vl~~~~~~~~~y~i~v~~~-~~~D~l~v~vE~~~~~~~~~~~~~~l~~~i~~~lk~~lg---v~~~V~l 76 (96)
T PF14535_consen 1 GVNVFPSQIEEVLREFPEVSPEYQIVVTRE-GGLDELTVRVELRPGFSDDAEDLEALAERIAERLKERLG---VRPEVEL 76 (96)
T ss_dssp TEEE-HHHHHHHHCTSTTEEEEEEEEEEEE-TTEEEEEEEEEESTTCCTTHHHHHHHHHHHHHHHHHHHS---S-EEEEE
T ss_pred CcEECHHHHHHHHHhCcCCCCcEEEEEEcC-CCCcEEEEEEEECCccCcchHHHHHHHHHHHHHHHhhcC---ceEEEEE
Confidence 78999999999999999999 555554434 3466777778888764310 000123445555555432 2225666
Q ss_pred e--cccCCCCCCcchh
Q 008636 528 I--DELPKTATGKVQK 541 (558)
Q Consensus 528 v--~~~P~t~~GK~~r 541 (558)
+ .+||++ .||..|
T Consensus 77 v~~gtLpr~-~~K~~R 91 (96)
T PF14535_consen 77 VPPGTLPRS-EGKAKR 91 (96)
T ss_dssp E-TT-S----SSSS-S
T ss_pred ECCCCccCC-CCcceE
Confidence 6 579998 678765
No 139
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=95.35 E-value=0.14 Score=50.65 Aligned_cols=93 Identities=20% Similarity=0.086 Sum_probs=77.4
Q ss_pred cccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCch--hHHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEE
Q 008636 39 TYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIP--AMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVF 116 (558)
Q Consensus 39 ~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (558)
-+|+.|....+..+|+.|.-.|..+||+|.++..-+. .-+...+|+.++|+.++|+.+.. .+.-..++++.++.+|.
T Consensus 109 ~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g~-~~~~~~l~~df~~tvI~ 187 (438)
T COG1541 109 GYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGGN-TERQLELMKDFKPTVIA 187 (438)
T ss_pred ecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCcc-HHHHHHHHHhcCCcEEE
Confidence 5999999999999999999999999999988776222 22678899999999999998843 44456778999999999
Q ss_pred EeCcChHHHHHHhhcC
Q 008636 117 VDHLSSSLLLEVVSLF 132 (558)
Q Consensus 117 ~~~~~~~~~~~~~~~~ 132 (558)
+.+.+.-.+.+.+...
T Consensus 188 ~tps~~l~lae~~~~~ 203 (438)
T COG1541 188 ATPSYLLYLAEEAEEE 203 (438)
T ss_pred EChHHHHHHHHHHHHc
Confidence 9998877777776665
No 140
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=88.74 E-value=3.1 Score=42.28 Aligned_cols=89 Identities=16% Similarity=0.131 Sum_probs=68.3
Q ss_pred cccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCch--hHHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEE
Q 008636 39 TYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIP--AMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVF 116 (558)
Q Consensus 39 ~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (558)
.+|..++......++..+...|+++||++......+. ......+++...|+..+++++.. .+.+...+++.++.+++
T Consensus 94 ~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~t~l~ 172 (422)
T TIGR02155 94 GYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQLIQDFKPDIIM 172 (422)
T ss_pred ccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHHHHHHCCCEEE
Confidence 4788888877777888888889999999887665443 23334677889999999887654 46778899999999999
Q ss_pred EeCcChHHHHHH
Q 008636 117 VDHLSSSLLLEV 128 (558)
Q Consensus 117 ~~~~~~~~~~~~ 128 (558)
+.+.....+.+.
T Consensus 173 ~~Ps~l~~L~~~ 184 (422)
T TIGR02155 173 VTPSYMLNLLEE 184 (422)
T ss_pred EcHHHHHHHHHH
Confidence 888766655443
No 141
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=87.76 E-value=3.9 Score=41.80 Aligned_cols=80 Identities=15% Similarity=0.112 Sum_probs=61.9
Q ss_pred cccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchh--HHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEE
Q 008636 39 TYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPA--MYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVF 116 (558)
Q Consensus 39 ~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (558)
.+|.+++...+..++..+...|+.+||++.++.+.+.. .....+|+..+|+.+++... ......++++.++.+++
T Consensus 105 ~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~i~~~~~t~l~ 181 (445)
T TIGR03335 105 FLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRIIESYRPTGIV 181 (445)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHHHHHhCCCEEE
Confidence 48999999988888988888999999999998876543 23456788899998876543 23456778999999887
Q ss_pred EeCcC
Q 008636 117 VDHLS 121 (558)
Q Consensus 117 ~~~~~ 121 (558)
+....
T Consensus 182 ~~ps~ 186 (445)
T TIGR03335 182 ASVFK 186 (445)
T ss_pred ECHHH
Confidence 75543
No 142
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=81.76 E-value=9.7 Score=34.76 Aligned_cols=76 Identities=14% Similarity=0.212 Sum_probs=53.5
Q ss_pred CCCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCch--hHHHHHHHHhhcCcEEEeccccCChHHHHH
Q 008636 28 DDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIP--AMYELHFAVPMSGAIFNTINTRLDARTISI 105 (558)
Q Consensus 28 p~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 105 (558)
++.+|++..-.-.|...+.... ...|+.++|++. .+|-.- -+...+++++..|+..+.+ +.++++.+-+
T Consensus 149 ~~D~a~l~yTsg~~~~~~~~~~-------~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l~ 219 (227)
T TIGR03089 149 ATAPALVAGGGEWTGAELVAAA-------RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPARLDQ 219 (227)
T ss_pred CCcceeeeccccccHHHHHHHH-------hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHHHHH
Confidence 3455655433233444433332 557889999999 888654 3456789999999999888 6889999888
Q ss_pred HHhhcCc
Q 008636 106 ILKHSES 112 (558)
Q Consensus 106 ~l~~~~~ 112 (558)
.+++.++
T Consensus 220 ~i~~~~v 226 (227)
T TIGR03089 220 IAETERV 226 (227)
T ss_pred HHHhhcC
Confidence 8888775
No 143
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=81.10 E-value=14 Score=38.50 Aligned_cols=86 Identities=15% Similarity=0.106 Sum_probs=64.0
Q ss_pred ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCch--hHHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEE
Q 008636 38 TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIP--AMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLV 115 (558)
Q Consensus 38 ~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (558)
..+|++.+...+..+... .++++++++...++... .+...+++++..|+.+++. +..+.+.+...+++.++.++
T Consensus 184 v~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~ 259 (513)
T PRK07656 184 AMLTHRQLLSNAADWAEY---LGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPL-PVFDPDEVFRLIETERITVL 259 (513)
T ss_pred EEEecHHHHHHHHHHHHh---hCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEec-CcCCHHHHHHHHHHhCCeEE
Confidence 358899887666554433 47889999988887643 3455678999999988775 56778889999999999999
Q ss_pred EEeCcChHHHHH
Q 008636 116 FVDHLSSSLLLE 127 (558)
Q Consensus 116 i~~~~~~~~~~~ 127 (558)
+..+.....+..
T Consensus 260 ~~~p~~~~~l~~ 271 (513)
T PRK07656 260 PGPPTMYNSLLQ 271 (513)
T ss_pred echHHHHHHHHc
Confidence 877665555443
No 144
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=75.38 E-value=46 Score=34.99 Aligned_cols=99 Identities=10% Similarity=0.048 Sum_probs=68.7
Q ss_pred CCCCceEEEC---------CccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCc--hhHHHHHHHHhhcCcEEEecc
Q 008636 27 CDDCPSIIYN---------DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNI--PAMYELHFAVPMSGAIFNTIN 95 (558)
Q Consensus 27 ~p~~~a~~~~---------~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~ 95 (558)
.++.+|++.. +-.+|++.+...+.... ...++.++|++..++|.. ..+...++..+..|+..+...
T Consensus 181 ~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~---~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~~ 257 (539)
T PRK06334 181 DPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACL---KFFSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVFAY 257 (539)
T ss_pred CcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHH---HhcCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEEec
Confidence 4577776652 24689988876554433 335678899988887743 223334567778888877665
Q ss_pred ccCChHHHHHHHhhcCccEEEEeCcChHHHHHH
Q 008636 96 TRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128 (558)
Q Consensus 96 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~ 128 (558)
...+...+...+++.++.++...+.....+...
T Consensus 258 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 290 (539)
T PRK06334 258 NPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKT 290 (539)
T ss_pred CCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHh
Confidence 556788899999999999999877766655443
No 145
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=74.07 E-value=25 Score=36.52 Aligned_cols=86 Identities=15% Similarity=0.206 Sum_probs=63.5
Q ss_pred cccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhH-HHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEEE
Q 008636 39 TYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAM-YELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFV 117 (558)
Q Consensus 39 ~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 117 (558)
.+|++++...+..... ..+++++|++...++....+ +...++++..|+..+..+.. +.+.+...+++.++.++++
T Consensus 186 ~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~-~~~~~~~~l~~~~~t~l~~ 261 (521)
T PRK06187 186 VLSHRNLFLHSLAVCA---WLKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRRF-DPENLLDLIETERVTFFFA 261 (521)
T ss_pred EeehHHHHHHHHHHHH---hhCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCCC-CHHHHHHHHHHhCCeEEEc
Confidence 5788888866665544 45788999998888765332 33445588889998877664 8888999999999999998
Q ss_pred eCcChHHHHHH
Q 008636 118 DHLSSSLLLEV 128 (558)
Q Consensus 118 ~~~~~~~~~~~ 128 (558)
.......+...
T Consensus 262 ~p~~~~~l~~~ 272 (521)
T PRK06187 262 VPTIWQMLLKA 272 (521)
T ss_pred hHHHHHHHHcC
Confidence 77655555443
No 146
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=68.63 E-value=40 Score=33.86 Aligned_cols=88 Identities=15% Similarity=0.067 Sum_probs=64.6
Q ss_pred CCCCceEEEccCCCCCCCceeeecHHHHHHHHHhccc---ccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEecC
Q 008636 187 SDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLI---DWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRK 263 (558)
Q Consensus 187 ~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~ 263 (558)
.+|.++++. -..-.+|++.+......... ..+++.++++....+.. ...+...++++..|+..+.+++
T Consensus 8 ~pd~~a~~~--------~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~-~~~~~~~~A~~~~G~~~v~l~~ 78 (417)
T PF00501_consen 8 YPDRIALID--------DEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNS-IEFVVAFLACLRAGAIPVPLDP 78 (417)
T ss_dssp STTSEEEEE--------TTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSS-HHHHHHHHHHHHTT-EEEEEET
T ss_pred CCCceEEEE--------CCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCcc-ceeeeeeccccccccccccccc
Confidence 456777776 13446788888655544443 44678899988888774 3335678888889999999874
Q ss_pred -CCHHHHHHHHHHhCCcEEEe
Q 008636 264 -FDAPTVFALIRKHGVTHMCG 283 (558)
Q Consensus 264 -~~~~~~~~~i~~~~~t~l~~ 283 (558)
...+.+...+++.++++++.
T Consensus 79 ~~~~~~~~~~l~~~~~~~ii~ 99 (417)
T PF00501_consen 79 SLSEDELRHILRQSGPKVIIT 99 (417)
T ss_dssp TSSHHHHHHHHHHHTESEEEE
T ss_pred ccccccccccccccceeEEEE
Confidence 67889999999999999996
No 147
>PRK08315 AMP-binding domain protein; Validated
Probab=68.56 E-value=42 Score=35.42 Aligned_cols=84 Identities=10% Similarity=0.025 Sum_probs=62.0
Q ss_pred ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC--chhHHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEE
Q 008636 38 TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPN--IPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLV 115 (558)
Q Consensus 38 ~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (558)
-.+|++.+...+..+... .+++++|++....+- +..++..+++.+..|+..+......+...+...+++.++.++
T Consensus 217 v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~ 293 (559)
T PRK08315 217 ATLTHRNILNNGYFIGEA---MKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTAL 293 (559)
T ss_pred EEeeHHHHHHHHHHHHHh---cCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEE
Confidence 358888886655544433 478999999887775 344556678899999988866666778888899999999998
Q ss_pred EEeCcChHH
Q 008636 116 FVDHLSSSL 124 (558)
Q Consensus 116 i~~~~~~~~ 124 (558)
+........
T Consensus 294 ~~~P~~~~~ 302 (559)
T PRK08315 294 YGVPTMFIA 302 (559)
T ss_pred ecchHHHHH
Confidence 876654433
No 148
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=67.49 E-value=25 Score=34.65 Aligned_cols=78 Identities=18% Similarity=0.176 Sum_probs=56.7
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEecccc-----CChHHHHHHHhhcCccEEEEe-----C
Q 008636 50 LQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTR-----LDARTISIILKHSESKLVFVD-----H 119 (558)
Q Consensus 50 ~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~-----~ 119 (558)
..|.-.|+.+|+++||-|.+ ++..|+...=++...|+.+|.+|-+ .+.+.++..+... +|.||.- .
T Consensus 60 ~AL~laL~al~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIipVhl~G~~ 135 (374)
T COG0399 60 AALHLALLALAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIPVHLAGQP 135 (374)
T ss_pred HHHHHHHHhcCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEEehhccCC
Confidence 35566677778999996654 4677888999999999999999875 4677888888765 6666653 2
Q ss_pred cChHHHHHHhhc
Q 008636 120 LSSSLLLEVVSL 131 (558)
Q Consensus 120 ~~~~~~~~~~~~ 131 (558)
-..+.+.++.+.
T Consensus 136 ~dm~~i~~la~~ 147 (374)
T COG0399 136 CDMDAIMALAKR 147 (374)
T ss_pred CCHHHHHHHHHH
Confidence 345566666543
No 149
>PLN02736 long-chain acyl-CoA synthetase
Probab=66.59 E-value=1e+02 Score=33.28 Aligned_cols=100 Identities=13% Similarity=0.033 Sum_probs=71.3
Q ss_pred eeecHHHHHHHHHhcc---cccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEec-CCCHHHHHHHHHHhCCcEEE
Q 008636 207 VVQCYKAFFIIAVDSL---IDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLR-KFDAPTVFALIRKHGVTHMC 282 (558)
Q Consensus 207 v~~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 282 (558)
..+|++.+........ ...++.++|++....+.... .....++++..|+..+.+. ..+++++...+++.++.+++
T Consensus 77 ~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e-~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~ 155 (651)
T PLN02736 77 KWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPE-WLIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIF 155 (651)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEE
Confidence 3478888865554433 34578999999888776542 2245678888899988775 46889999999999999999
Q ss_pred ehHHHHHHHhcCccccCCCCceEEEEe
Q 008636 283 GAPIVLNLLSSSPEAKQLDRPVRILTA 309 (558)
Q Consensus 283 ~~p~~l~~l~~~~~~~~~~~l~~v~~~ 309 (558)
..+..+..+..... .++.++.++..
T Consensus 156 ~~~~~~~~~~~~~~--~~~~l~~ii~~ 180 (651)
T PLN02736 156 CVPQTLNTLLSCLS--EIPSVRLIVVV 180 (651)
T ss_pred ECHHHHHHHHHHhh--cCCCceEEEEE
Confidence 99888776654322 23456665554
No 150
>PRK12583 acyl-CoA synthetase; Provisional
Probab=65.18 E-value=53 Score=34.61 Aligned_cols=82 Identities=13% Similarity=0.084 Sum_probs=60.5
Q ss_pred ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC--chhHHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEE
Q 008636 38 TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPN--IPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLV 115 (558)
Q Consensus 38 ~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (558)
..+|++.+...+..+... .|++++|++....|- ....+..+++++..|+.++......+...+...+++.++.++
T Consensus 219 v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l 295 (558)
T PRK12583 219 ATLSHHNILNNGYFVAES---LGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTAL 295 (558)
T ss_pred EEeeHHHHHHHHHHHHHH---hCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEE
Confidence 468888886665554443 478899998877664 345667778888899888755556677888889999999998
Q ss_pred EEeCcCh
Q 008636 116 FVDHLSS 122 (558)
Q Consensus 116 i~~~~~~ 122 (558)
+..+...
T Consensus 296 ~~~P~~~ 302 (558)
T PRK12583 296 YGVPTMF 302 (558)
T ss_pred eccHHHH
Confidence 8766543
No 151
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=64.93 E-value=79 Score=26.12 Aligned_cols=100 Identities=11% Similarity=0.014 Sum_probs=58.1
Q ss_pred EEEecCc-hhhhhhhHHHHHH-HhcceEEEec-CCCHHHHHHHHHHhCCcEEEehHH------HHHHHhcCccccCCCCc
Q 008636 233 LLWTLPM-FHNNGWSFTWGAA-VVGATNVCLR-KFDAPTVFALIRKHGVTHMCGAPI------VLNLLSSSPEAKQLDRP 303 (558)
Q Consensus 233 ~~~~~p~-~~~~g~~~~~~~l-~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~------~l~~l~~~~~~~~~~~l 303 (558)
++.+.+- .|..|...+...+ ..|..++... ...++++.+.+.+++|+++..+-. .++.+.+......++.+
T Consensus 7 l~~~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~~~~~ 86 (137)
T PRK02261 7 VLGVIGADCHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAGLGDI 86 (137)
T ss_pred EEEeCCCChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcCCCCC
Confidence 3334443 5777765433333 4577766665 467899999999999999876631 22333333333334444
Q ss_pred eEEEEecCCC-C----hhhhHHhhhcCCeeeecccCC
Q 008636 304 VRILTAGSPP-P----APVLLRTESLGFIVSHGYGKT 335 (558)
Q Consensus 304 ~~v~~~g~~l-~----~~~~~~~~~~~~~v~~~YG~t 335 (558)
.+++||... . .+..+.+++.| +-..|++.
T Consensus 87 -~i~vGG~~~~~~~~~~~~~~~l~~~G--~~~vf~~~ 120 (137)
T PRK02261 87 -LLYVGGNLVVGKHDFEEVEKKFKEMG--FDRVFPPG 120 (137)
T ss_pred -eEEEECCCCCCccChHHHHHHHHHcC--CCEEECcC
Confidence 566777553 2 33445666666 34556644
No 152
>PLN03051 acyl-activating enzyme; Provisional
Probab=63.29 E-value=39 Score=35.10 Aligned_cols=85 Identities=13% Similarity=0.023 Sum_probs=58.8
Q ss_pred ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchh-HHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEE
Q 008636 38 TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPA-MYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVF 116 (558)
Q Consensus 38 ~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (558)
..+|++.+...+... ....++.++|++...+|-+.. .+..+++++..|+..+..+.......+...+++.++.++.
T Consensus 137 V~~sh~~~~~~~~~~---~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~ 213 (499)
T PLN03051 137 IPWTHLSPLRCASDG---WAHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLG 213 (499)
T ss_pred EEEccchHHHHHHHH---HHhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEE
Confidence 357877765543322 234578889988776664332 2345778889999988876555677889999999999998
Q ss_pred EeCcChHHH
Q 008636 117 VDHLSSSLL 125 (558)
Q Consensus 117 ~~~~~~~~~ 125 (558)
..+.....+
T Consensus 214 ~vP~~~~~l 222 (499)
T PLN03051 214 LVPSIVKAW 222 (499)
T ss_pred eCHHHHHHH
Confidence 866555444
No 153
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=61.06 E-value=56 Score=34.64 Aligned_cols=96 Identities=11% Similarity=-0.009 Sum_probs=66.8
Q ss_pred CCCceEEEC---------CccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchh--HHHHHHHHhhcCcEEEeccc
Q 008636 28 DDCPSIIYN---------DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPA--MYELHFAVPMSGAIFNTINT 96 (558)
Q Consensus 28 p~~~a~~~~---------~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~ 96 (558)
++.+|++.. +-.+|++.+...+... ....+++++|++....+.... ....+++.+..|+..+....
T Consensus 204 ~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~ 280 (570)
T PRK04319 204 REDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTG---KYVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDGG 280 (570)
T ss_pred CCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHH---HHhcCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEECC
Confidence 456676541 1357888776544333 334578889987766655432 34567788899998888777
Q ss_pred cCChHHHHHHHhhcCccEEEEeCcChHHHH
Q 008636 97 RLDARTISIILKHSESKLVFVDHLSSSLLL 126 (558)
Q Consensus 97 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 126 (558)
..+.+.+...+++.++.+++..+.....+.
T Consensus 281 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 310 (570)
T PRK04319 281 RFSPERWYRILEDYKVTVWYTAPTAIRMLM 310 (570)
T ss_pred CCCHHHHHHHHHHcCCeEEEeCHHHHHHHH
Confidence 788899999999999999988776555443
No 154
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=61.03 E-value=73 Score=31.76 Aligned_cols=98 Identities=15% Similarity=0.119 Sum_probs=71.9
Q ss_pred CCCceEEEC---------CccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchh-HHHHHHHHhhcCcEEEecccc
Q 008636 28 DDCPSIIYN---------DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPA-MYELHFAVPMSGAIFNTINTR 97 (558)
Q Consensus 28 p~~~a~~~~---------~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~ 97 (558)
++.++++.. ...+|++.+...+..+.. ..+++++|++....+.... .+..+++.+..|+..+..+..
T Consensus 119 ~~~~~~i~~TSGTtG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~ 195 (408)
T TIGR01733 119 PDDLAYVIYTSGSTGRPKGVVVTHRSLVNLLAWLAR---RYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPED 195 (408)
T ss_pred CCCcEEEEEcCCCCCCCCEEEeccHHHHHHHHHHHH---hcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChh
Confidence 566676642 146788888877766655 3467789999887776544 456678888889888877766
Q ss_pred CC--hHHHHHHHhhcCccEEEEeCcChHHHHHH
Q 008636 98 LD--ARTISIILKHSESKLVFVDHLSSSLLLEV 128 (558)
Q Consensus 98 ~~--~~~l~~~l~~~~~~~ii~~~~~~~~~~~~ 128 (558)
.. ...+..+++..++..+++.+.....+.+.
T Consensus 196 ~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~~ 228 (408)
T TIGR01733 196 EERDAALLAALIAEHPVTVLNLTPSLLALLAAA 228 (408)
T ss_pred hccCHHHHHHHHHHcCceEEEeCHHHHHHHHHh
Confidence 55 67889999999999999988777666554
No 155
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=60.99 E-value=70 Score=32.40 Aligned_cols=105 Identities=13% Similarity=0.097 Sum_probs=73.9
Q ss_pred ceeeecHHHHHHHHHhcc---cccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEecC-CCHHHHHHHHHHhCCcE
Q 008636 205 KGVVQCYKAFFIIAVDSL---IDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRK-FDAPTVFALIRKHGVTH 280 (558)
Q Consensus 205 k~v~~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~-~~~~~~~~~i~~~~~t~ 280 (558)
.++.+|.+.+.......+ ..+++..+|++..+.|.+.. -....+++..+|...+...+ ....++.-.+++.++-.
T Consensus 74 eg~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~-w~l~~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k~ 152 (596)
T KOG1177|consen 74 EGIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYE-WVLCQLACARAGLVLVNLNPAYQSEELRYVLKKVGCKA 152 (596)
T ss_pred ccchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHH-HHHHHHHHHHhceEEeccCcccccHHHHHHHhhcCeEE
Confidence 456688888865554443 45689999999999987532 12456677778888887754 34567777899999999
Q ss_pred EEehHHHH-----HHHhcCc-----------cccCCCCceEEEEec
Q 008636 281 MCGAPIVL-----NLLSSSP-----------EAKQLDRPVRILTAG 310 (558)
Q Consensus 281 l~~~p~~l-----~~l~~~~-----------~~~~~~~l~~v~~~g 310 (558)
++..|.+. +.+.+.. +...++.+++++..+
T Consensus 153 l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ 198 (596)
T KOG1177|consen 153 LFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILAD 198 (596)
T ss_pred EEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecC
Confidence 99988653 3344332 445677888888877
No 156
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=60.62 E-value=67 Score=33.37 Aligned_cols=86 Identities=10% Similarity=-0.026 Sum_probs=64.4
Q ss_pred ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchh-HHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEE
Q 008636 38 TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPA-MYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVF 116 (558)
Q Consensus 38 ~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (558)
..+|++.+...+...... .+++++|++...+|-+.. .+..+++++..|+..+.. +..+.+.+...+++.++.++.
T Consensus 179 v~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 254 (515)
T TIGR03098 179 VVLSHRNLVAGAQSVATY---LENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLH-DYLLPRDVLKALEKHGITGLA 254 (515)
T ss_pred EEEecHHHHHHHHHHHHH---hCCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEc-CCCCHHHHHHHHHHcCCceEe
Confidence 458888887766655543 357889999888886543 345678889999998866 456788899999999999999
Q ss_pred EeCcChHHHHH
Q 008636 117 VDHLSSSLLLE 127 (558)
Q Consensus 117 ~~~~~~~~~~~ 127 (558)
..+.....+..
T Consensus 255 ~~P~~~~~l~~ 265 (515)
T TIGR03098 255 AVPPLWAQLAQ 265 (515)
T ss_pred cChHHHHHHHh
Confidence 87766555443
No 157
>PRK06381 threonine synthase; Validated
Probab=58.69 E-value=1.1e+02 Score=29.53 Aligned_cols=114 Identities=11% Similarity=0.025 Sum_probs=72.3
Q ss_pred CCCCCCCCCCCCChhhHHHHHhhcCC-CCceEEECCc--cccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHH
Q 008636 3 RLKPNPANSCPLTPLGFIERAATACD-DCPSIIYNDT--TYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYE 79 (558)
Q Consensus 3 ~~~~~~~~~~~~tl~~~l~~~a~~~p-~~~a~~~~~~--~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~ 79 (558)
++.+........|..-.+++..+... .++.+-.++. +=||++ +.+..+...+.+.|. +.| +.+..+-.-+.
T Consensus 4 ~~~~~~~~~~g~TPL~~~~~l~~~~G~~~i~~K~E~~nptGS~K~--R~a~~~l~~a~~~g~---~~l-v~aSsGN~g~a 77 (319)
T PRK06381 4 ELSSSEEKPPGGTPLLRARKLEEELGLRKIYLKFEGANPTGTQKD--RIAEAHVRRAMRLGY---SGI-TVGTCGNYGAS 77 (319)
T ss_pred hhhccccccCCCCceeEhHhhHHhcCCceEEEEecCCCCccCcHH--HHHHHHHHHHHHcCC---CEE-EEeCCcHHHHH
Confidence 34455555556666665666555443 4677777653 334443 333344444555553 344 44566777778
Q ss_pred HHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEEEeCcCh
Q 008636 80 LHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122 (558)
Q Consensus 80 ~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 122 (558)
+.++|...|..+..+=|...+......++..++++++++.+..
T Consensus 78 lA~~aa~~G~~~~ivvp~~~~~~~~~~l~~~GA~V~~~~~~~~ 120 (319)
T PRK06381 78 IAYFARLYGLKAVIFIPRSYSNSRVKEMEKYGAEIIYVDGKYE 120 (319)
T ss_pred HHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEcCCCHH
Confidence 8888889998887776665555666789999999999987543
No 158
>PLN02565 cysteine synthase
Probab=57.29 E-value=1.6e+02 Score=28.51 Aligned_cols=89 Identities=16% Similarity=0.089 Sum_probs=62.0
Q ss_pred CceEEECCc--cccHHHHHHHHHHHHHHHHhCCC-CCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHHHH
Q 008636 30 CPSIIYNDT--TYTWSQTYRRCLQLASSLSSFGI-NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISII 106 (558)
Q Consensus 30 ~~a~~~~~~--~~Ty~~l~~~v~~la~~L~~~Gv-~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 106 (558)
++.+-.+.. +-||++ +-+..+-..+.+.|. .+|....+....+=.-+.+.++|...|..+..+=|...+......
T Consensus 31 ~i~~K~E~~nPtGSfKd--R~A~~~l~~~~~~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~ 108 (322)
T PLN02565 31 RIAAKLEMMEPCSSVKD--RIGYSMITDAEEKGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRII 108 (322)
T ss_pred eEEEEecccCCccchHH--HHHHHHHHHHHHcCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHH
Confidence 455555443 344443 334444445555664 788665566666667777778888899998888887777788888
Q ss_pred HhhcCccEEEEeCc
Q 008636 107 LKHSESKLVFVDHL 120 (558)
Q Consensus 107 l~~~~~~~ii~~~~ 120 (558)
++..+++++++++.
T Consensus 109 i~~~GA~V~~~~~~ 122 (322)
T PLN02565 109 LLAFGAELVLTDPA 122 (322)
T ss_pred HHHcCCEEEEeCCC
Confidence 99999999999864
No 159
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=56.89 E-value=1.2e+02 Score=26.93 Aligned_cols=88 Identities=13% Similarity=0.144 Sum_probs=53.3
Q ss_pred EEEEecCc--hhhhhhhHHHHHH-HhcceEEEec-CCCHHHHHHHHHHhCCcEEEehHH------HHHHHhcCccccCCC
Q 008636 232 VLLWTLPM--FHNNGWSFTWGAA-VVGATNVCLR-KFDAPTVFALIRKHGVTHMCGAPI------VLNLLSSSPEAKQLD 301 (558)
Q Consensus 232 ~~~~~~p~--~~~~g~~~~~~~l-~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~------~l~~l~~~~~~~~~~ 301 (558)
+++...+- .|..|...+...+ ..|-.++.+. ...++++.+.+++.+|+++..+-+ .++.+.+......+.
T Consensus 86 ~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~~~ 165 (197)
T TIGR02370 86 KVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEGYR 165 (197)
T ss_pred eEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcCCC
Confidence 44444444 6777765544444 3576666554 567899999999999999866632 223333332333232
Q ss_pred CceEEEEecCCCChhhhH
Q 008636 302 RPVRILTAGSPPPAPVLL 319 (558)
Q Consensus 302 ~l~~v~~~g~~l~~~~~~ 319 (558)
.--.+++||.+++++..+
T Consensus 166 ~~v~i~vGG~~~~~~~~~ 183 (197)
T TIGR02370 166 DSVKFMVGGAPVTQDWAD 183 (197)
T ss_pred CCCEEEEEChhcCHHHHH
Confidence 223588999999776444
No 160
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=56.20 E-value=40 Score=34.13 Aligned_cols=82 Identities=10% Similarity=0.128 Sum_probs=60.5
Q ss_pred ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCch-hHHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEE
Q 008636 38 TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIP-AMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVF 116 (558)
Q Consensus 38 ~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (558)
..+|++.+...+..++.. .+++++|++...++-.. ..+..+++++..|+..+..++. +.+...+++.++.++.
T Consensus 129 v~~s~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~---~~~~~~l~~~~~t~~~ 202 (436)
T TIGR01923 129 VPHTFRNHYASAVGSKEN---LGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF---NQLLEMIANERVTHIS 202 (436)
T ss_pred EEEehHHHHHHHHHHHhh---cCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH---HHHHHHHHHhCCeEEE
Confidence 468999988777666654 47899999988777542 2334568888999998887554 3788889999999998
Q ss_pred EeCcChHHH
Q 008636 117 VDHLSSSLL 125 (558)
Q Consensus 117 ~~~~~~~~~ 125 (558)
........+
T Consensus 203 ~~P~~l~~l 211 (436)
T TIGR01923 203 LVPTQLNRL 211 (436)
T ss_pred eHHHHHHHH
Confidence 866554443
No 161
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=54.69 E-value=36 Score=33.63 Aligned_cols=64 Identities=20% Similarity=0.253 Sum_probs=43.9
Q ss_pred HHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEecccc-----CChHHHHHHHhhcCccEEEEe
Q 008636 51 QLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTR-----LDARTISIILKHSESKLVFVD 118 (558)
Q Consensus 51 ~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~ 118 (558)
.+-..|...|+++||.|++- ...+..+.-|+..+|+.++++|.+ .+.+.++..+..-. ++|+..
T Consensus 52 Al~~al~~l~~~~gdeVi~p---~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t-~ai~~~ 120 (363)
T PF01041_consen 52 ALHLALRALGLGPGDEVIVP---AYTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKT-KAILVV 120 (363)
T ss_dssp HHHHHHHHTTGGTTSEEEEE---SSS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTE-EEEEEE
T ss_pred HHHHHHHhcCCCcCceEecC---CCcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCc-cEEEEe
Confidence 45556667899999999885 445666778889999999999876 35677777776443 666553
No 162
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=54.35 E-value=1.4e+02 Score=27.89 Aligned_cols=79 Identities=11% Similarity=0.119 Sum_probs=51.0
Q ss_pred cHHHHHH-HHHHHHHHHHhCC-CCCCCEEEEEcCCchhHHHHHHHHhhc--------CcEEEeccccC---ChHHHHHHH
Q 008636 41 TWSQTYR-RCLQLASSLSSFG-INPGHVVSVIAPNIPAMYELHFAVPMS--------GAIFNTINTRL---DARTISIIL 107 (558)
Q Consensus 41 Ty~~l~~-~v~~la~~L~~~G-v~~gd~V~i~~~~~~~~~~~~lA~~~~--------G~~~v~l~~~~---~~~~l~~~l 107 (558)
++..+.+ ...++.+.+.+.+ +.+|++|+|...-+.|.++++..+... ...++.++... +.+.+..+.
T Consensus 4 ~~~~~~~~~~~~v~~~i~~~~li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~ 83 (258)
T PRK10696 4 EFNKLQKRLRRQVGQAIADFNMIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYL 83 (258)
T ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHH
Confidence 3444444 2344555666654 578999999999999998887777442 24556666643 334456667
Q ss_pred hhcCccEEEEeC
Q 008636 108 KHSESKLVFVDH 119 (558)
Q Consensus 108 ~~~~~~~ii~~~ 119 (558)
+..+..+.+.+.
T Consensus 84 ~~lgI~~~v~~~ 95 (258)
T PRK10696 84 ESLGVPYHIEEQ 95 (258)
T ss_pred HHhCCCEEEEEe
Confidence 777777766543
No 163
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=54.25 E-value=35 Score=28.25 Aligned_cols=43 Identities=12% Similarity=0.081 Sum_probs=34.4
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCC---chhHHHHHHHHhhcCcEEE
Q 008636 50 LQLASSLSSFGINPGHVVSVIAPN---IPAMYELHFAVPMSGAIFN 92 (558)
Q Consensus 50 ~~la~~L~~~Gv~~gd~V~i~~~~---~~~~~~~~lA~~~~G~~~v 92 (558)
+.++..|.+.|+.+++.|.+++.. +.....+++++-.+|..-+
T Consensus 81 ~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~~v 126 (138)
T cd01445 81 AEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPDV 126 (138)
T ss_pred HHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCCCe
Confidence 478888999999999999999975 5666777778888886533
No 164
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=53.66 E-value=76 Score=22.95 Aligned_cols=66 Identities=6% Similarity=0.057 Sum_probs=52.3
Q ss_pred ccccHHHHHHHHHHHH---HHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccE
Q 008636 38 TTYTWSQTYRRCLQLA---SSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKL 114 (558)
Q Consensus 38 ~~~Ty~~l~~~v~~la---~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 114 (558)
...||++|.+..+.++ +.|.+..++..|-|+|+.=++... .-++.++...+.++++.-+++.++++
T Consensus 8 gi~t~keL~eE~~~Fv~~kA~l~k~~L~dDde~aIfnI~gT~S-----------y~V~Fl~~~~s~eev~~ele~mga~i 76 (88)
T COG4009 8 GIATYKELDEELKDFVRLKAHLAKVDLNDDDELAIFNIEGTSS-----------YYVVFLEEVESEEEVERELEDMGAEI 76 (88)
T ss_pred hheeHHhhhHHHHHHHHHHHHhcccccCCCCcEEEEEecCcee-----------EEEEEEeccCCHHHHHHHHHHhCchh
Confidence 3679999998887665 566677888899999998776432 34577888889999999999988875
No 165
>PLN03052 acetate--CoA ligase; Provisional
Probab=53.45 E-value=1.3e+02 Score=33.16 Aligned_cols=98 Identities=9% Similarity=0.059 Sum_probs=69.2
Q ss_pred CCCceEEEccCCCCCCCceeeecHHHHHHHHHhcc---cccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEec-C
Q 008636 188 DLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSL---IDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLR-K 263 (558)
Q Consensus 188 ~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~-~ 263 (558)
++.++++....+..+.+ ...+|++.+........ ...++.++|++...+|..- -....+++++..|+..+.+. .
T Consensus 189 pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~-e~via~LA~~~~Gav~vpi~p~ 266 (728)
T PLN03052 189 DDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNV-HAVIIYLAIILAGCVVVSIADS 266 (728)
T ss_pred CCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCH-HHHHHHHHHHHcCCEEEeeCCC
Confidence 45677665433321222 24578888865554433 4457899999999998743 23456778888899888876 5
Q ss_pred CCHHHHHHHHHHhCCcEEEehHHH
Q 008636 264 FDAPTVFALIRKHGVTHMCGAPIV 287 (558)
Q Consensus 264 ~~~~~~~~~i~~~~~t~l~~~p~~ 287 (558)
+.++.+...+++.++.+++.....
T Consensus 267 ~~~~~l~~rl~~~~~k~lit~d~~ 290 (728)
T PLN03052 267 FAPSEIATRLKISKAKAIFTQDVI 290 (728)
T ss_pred CCHHHHHHHHHhcCceEEEEcCcc
Confidence 789999999999999999887643
No 166
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=52.70 E-value=1.5e+02 Score=28.02 Aligned_cols=90 Identities=21% Similarity=0.269 Sum_probs=56.6
Q ss_pred HHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccccC----ChHHHHHHHhhcCccEEEEeCcC-h
Q 008636 48 RCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRL----DARTISIILKHSESKLVFVDHLS-S 122 (558)
Q Consensus 48 ~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~----~~~~l~~~l~~~~~~~ii~~~~~-~ 122 (558)
|...||..|++. |-.|.+++......+... +...|..+..++-.. ...++..+++..+++++|+|.-. .
T Consensus 19 Rcl~LA~~l~~~----g~~v~f~~~~~~~~~~~~--i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~vV~D~y~~~ 92 (279)
T TIGR03590 19 RCLTLARALHAQ----GAEVAFACKPLPGDLIDL--LLSAGFPVYELPDESSRYDDALELINLLEEEKFDILIVDHYGLD 92 (279)
T ss_pred HHHHHHHHHHHC----CCEEEEEeCCCCHHHHHH--HHHcCCeEEEecCCCchhhhHHHHHHHHHhcCCCEEEEcCCCCC
Confidence 567889999765 456778777765544332 346677766664332 24468888999999999998743 3
Q ss_pred HHHHHHhhcCCCCCCCCcEEEEcCCc
Q 008636 123 SLLLEVVSLFPPHSKTPKLVLITDDK 148 (558)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (558)
..+...... ...+++.+++..
T Consensus 93 ~~~~~~~k~-----~~~~l~~iDD~~ 113 (279)
T TIGR03590 93 ADWEKLIKE-----FGRKILVIDDLA 113 (279)
T ss_pred HHHHHHHHH-----hCCeEEEEecCC
Confidence 333333322 144666666543
No 167
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=52.46 E-value=1e+02 Score=32.62 Aligned_cols=97 Identities=18% Similarity=0.128 Sum_probs=66.6
Q ss_pred CCCCceEEEC--C-------ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCch-hHHHHHHHHhhcCcEEEeccc
Q 008636 27 CDDCPSIIYN--D-------TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIP-AMYELHFAVPMSGAIFNTINT 96 (558)
Q Consensus 27 ~p~~~a~~~~--~-------~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~ 96 (558)
.++.+|++.. + ..+|.+.+...+.... ...++.++|++...+|-.. ..+...++.+..|+..+.. +
T Consensus 170 ~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~v~~-~ 245 (563)
T PLN02860 170 APDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKI---AIVGYGEDDVYLHTAPLCHIGGLSSALAMLMVGACHVLL-P 245 (563)
T ss_pred CCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHH---hhcCCCCCCEEEEecCchhhccHHHHHHHHHcCceEEec-C
Confidence 4567776541 1 3578887765444332 2357889998888777432 2334567778889887765 5
Q ss_pred cCChHHHHHHHhhcCccEEEEeCcChHHHHH
Q 008636 97 RLDARTISIILKHSESKLVFVDHLSSSLLLE 127 (558)
Q Consensus 97 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~ 127 (558)
..+...+...+++.++.++...+.....+.+
T Consensus 246 ~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~ 276 (563)
T PLN02860 246 KFDAKAALQAIKQHNVTSMITVPAMMADLIS 276 (563)
T ss_pred CCCHHHHHHHHHHhCCeeEEeChHHHHHHHH
Confidence 6778888999999999999887766555543
No 168
>PRK09274 peptide synthase; Provisional
Probab=52.38 E-value=1.4e+02 Score=31.46 Aligned_cols=97 Identities=7% Similarity=-0.088 Sum_probs=65.4
Q ss_pred CCCceEEEccCCCC-CCCceeeecHHHHHHHHHhcc---cccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEecC
Q 008636 188 DLDPMVLNYTWGTT-SAPKGVVQCYKAFFIIAVDSL---IDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRK 263 (558)
Q Consensus 188 ~~~~~~i~~TSGtT-G~pk~v~~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~ 263 (558)
++.++++....+++ +..+...+|+..+........ ...++.+++++....+... ......++++..|+..+.++.
T Consensus 20 p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~-~~~~~~la~~~~G~~~v~l~~ 98 (552)
T PRK09274 20 PDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSL-EFFALTFALFKAGAVPVLVDP 98 (552)
T ss_pred CCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcH-HHHHHHHHHHHcCeEEEEcCC
Confidence 44666654333221 223334688888865554333 3457889999998887643 223557788889999888764
Q ss_pred -CCHHHHHHHHHHhCCcEEEehH
Q 008636 264 -FDAPTVFALIRKHGVTHMCGAP 285 (558)
Q Consensus 264 -~~~~~~~~~i~~~~~t~l~~~p 285 (558)
...+++...+++.++..++..+
T Consensus 99 ~~~~~~l~~~l~~~~~~~~i~~~ 121 (552)
T PRK09274 99 GMGIKNLKQCLAEAQPDAFIGIP 121 (552)
T ss_pred CccHHHHHHHHHhcCCCEEEecc
Confidence 5778888999999999988754
No 169
>PRK08316 acyl-CoA synthetase; Validated
Probab=52.24 E-value=1.1e+02 Score=31.87 Aligned_cols=84 Identities=11% Similarity=-0.009 Sum_probs=60.4
Q ss_pred ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCch--hHHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEE
Q 008636 38 TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIP--AMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLV 115 (558)
Q Consensus 38 ~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (558)
..+|++.+...+ +......++++++++...+|-.. .+...+++++..|+..++.+ ..+.+.+...+++.++.++
T Consensus 189 v~~s~~~l~~~~---~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~ 264 (523)
T PRK08316 189 AMLTHRALIAEY---VSCIVAGDMSADDIPLHALPLYHCAQLDVFLGPYLYVGATNVILD-APDPELILRTIEAERITSF 264 (523)
T ss_pred EEEecHHHHHHH---HHHHHHhCCCCCceEEEccCCchhhhHHHHHHHHHhcCceEEEec-CCCHHHHHHHHHHhCCeEE
Confidence 458888876553 33445567899999988777543 23345667788899988874 4568889999999999998
Q ss_pred EEeCcChHHH
Q 008636 116 FVDHLSSSLL 125 (558)
Q Consensus 116 i~~~~~~~~~ 125 (558)
++.+.....+
T Consensus 265 ~~~P~~~~~l 274 (523)
T PRK08316 265 FAPPTVWISL 274 (523)
T ss_pred EeCHHHHHHH
Confidence 8876554443
No 170
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=51.91 E-value=54 Score=32.62 Aligned_cols=59 Identities=20% Similarity=0.250 Sum_probs=34.8
Q ss_pred HHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEecccc-----CChHHHHHHHhhcCccEEEEe
Q 008636 56 LSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTR-----LDARTISIILKHSESKLVFVD 118 (558)
Q Consensus 56 L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~ 118 (558)
+...++++||.|++-.+ .+.....++...|+.+++++.+ .+.+.++..+.. +.++|+..
T Consensus 63 l~al~~~pGd~Viv~~~---t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~ 126 (376)
T TIGR02379 63 ALLLDIQPGDEVIMPSY---TFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVPV 126 (376)
T ss_pred HHHcCCCCcCEEEECCC---CcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEe
Confidence 33446788888776443 3444455566778877777653 234556665543 55666543
No 171
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=50.27 E-value=2.4e+02 Score=29.90 Aligned_cols=88 Identities=18% Similarity=0.227 Sum_probs=60.7
Q ss_pred ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhH-HHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEE
Q 008636 38 TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAM-YELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVF 116 (558)
Q Consensus 38 ~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (558)
-.+|++.+...+..+. .....++.+++++...+|-...+ ....++.+..|+..+...+..+...+...+++.++.+++
T Consensus 199 v~~s~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~ 277 (576)
T PRK05620 199 VVYSHRSLYLQSLSLR-TTDSLAVTHGESFLCCVPIYHVLSWGVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAH 277 (576)
T ss_pred EEEEcHHHHHHHHHhh-hhhhcCCCCCCeEEEeCChHHhhhhHHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceee
Confidence 3578887754443322 12235788899998887765432 334577777888887776677888999999999999998
Q ss_pred EeCcChHHHH
Q 008636 117 VDHLSSSLLL 126 (558)
Q Consensus 117 ~~~~~~~~~~ 126 (558)
..+.....+.
T Consensus 278 ~~P~~~~~l~ 287 (576)
T PRK05620 278 GVPTLWIQLM 287 (576)
T ss_pred ecCHHHHHHH
Confidence 8766554443
No 172
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=49.09 E-value=68 Score=31.90 Aligned_cols=55 Identities=18% Similarity=0.282 Sum_probs=32.1
Q ss_pred CCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEecccc-----CChHHHHHHHhhcCccEEEE
Q 008636 59 FGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTR-----LDARTISIILKHSESKLVFV 117 (558)
Q Consensus 59 ~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~ 117 (558)
.++++||.|++-.+. +.....++...|+.++.++.+ .+.+.++..+.. ++++|+.
T Consensus 66 ~~~~~Gd~Viv~~~t---~~~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~ 125 (375)
T PRK11706 66 LDIQPGDEVIMPSYT---FVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVP 125 (375)
T ss_pred hCCCCCCEEEECCCC---cHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEE
Confidence 456788877664443 333345556677777776543 345666666543 5565554
No 173
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=48.89 E-value=2e+02 Score=30.01 Aligned_cols=97 Identities=7% Similarity=-0.041 Sum_probs=65.9
Q ss_pred CCCCceEEEC---------CccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHH--H-HHHHHhhcCcEEEec
Q 008636 27 CDDCPSIIYN---------DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMY--E-LHFAVPMSGAIFNTI 94 (558)
Q Consensus 27 ~p~~~a~~~~---------~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~--~-~~lA~~~~G~~~v~l 94 (558)
.++.+|++.. +..+|.+.+...+.... ...++.++|++...+|....+- . ..++++..|+..+..
T Consensus 181 ~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~~ 257 (527)
T TIGR02275 181 KSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSV---EICWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVLA 257 (527)
T ss_pred CCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHH---hhcCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEEC
Confidence 4567776541 24688888776655433 3456788999888877654322 2 357778889887764
Q ss_pred cccCChHHHHHHHhhcCccEEEEeCcChHHHHH
Q 008636 95 NTRLDARTISIILKHSESKLVFVDHLSSSLLLE 127 (558)
Q Consensus 95 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~ 127 (558)
+......+...+++.++.++.........+..
T Consensus 258 -~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~ 289 (527)
T TIGR02275 258 -PDPSPTDCFPLIERHKVTVTALVPPAVALWMQ 289 (527)
T ss_pred -CCCCHHHHHHHHHHhCCeEEEecHHHHHHHHh
Confidence 44567778888999999999987766555443
No 174
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=48.73 E-value=1.1e+02 Score=29.25 Aligned_cols=75 Identities=16% Similarity=0.250 Sum_probs=56.7
Q ss_pred HHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhc
Q 008636 54 SSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131 (558)
Q Consensus 54 ~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~ 131 (558)
.-|++.|++||.+|+|..--+.-.+...+|.+. |.-+..++... ..-++.++..+++..+...+..+....+...
T Consensus 172 spLk~~g~~pG~~vgI~GlGGLGh~aVq~AKAM-G~rV~vis~~~--~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~ 246 (360)
T KOG0023|consen 172 SPLKRSGLGPGKWVGIVGLGGLGHMAVQYAKAM-GMRVTVISTSS--KKKEEAIKSLGADVFVDSTEDPDIMKAIMKT 246 (360)
T ss_pred ehhHHcCCCCCcEEEEecCcccchHHHHHHHHh-CcEEEEEeCCc--hhHHHHHHhcCcceeEEecCCHHHHHHHHHh
Confidence 346778999999999999999999999999875 66666665543 3456678999999888766555555555443
No 175
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=48.09 E-value=2e+02 Score=29.82 Aligned_cols=95 Identities=17% Similarity=0.072 Sum_probs=66.2
Q ss_pred CCCCceEEEC---------CccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchh--HHHHHHHHhhcCcEEEecc
Q 008636 27 CDDCPSIIYN---------DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPA--MYELHFAVPMSGAIFNTIN 95 (558)
Q Consensus 27 ~p~~~a~~~~---------~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~ 95 (558)
.++.+|++.. +..+|++.+...+.... ....+++++|++....|-... +...+++.+..|+..+..+
T Consensus 159 ~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~--~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~ 236 (508)
T TIGR02262 159 QADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYA--RNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMG 236 (508)
T ss_pred CCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHh--HHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeC
Confidence 3566776542 24678888876554322 233578999988877765543 3345667788899888877
Q ss_pred ccCChHHHHHHHhhcCccEEEEeCcChH
Q 008636 96 TRLDARTISIILKHSESKLVFVDHLSSS 123 (558)
Q Consensus 96 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 123 (558)
...+...+...+++.++.++...+....
T Consensus 237 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~ 264 (508)
T TIGR02262 237 ERPTPDAVFDRLRRHQPTIFYGVPTLYA 264 (508)
T ss_pred CCCCHHHHHHHHHHHCCcEEecchHHHH
Confidence 6667888889999999999988775433
No 176
>PLN02246 4-coumarate--CoA ligase
Probab=47.99 E-value=1.4e+02 Score=31.25 Aligned_cols=83 Identities=13% Similarity=0.136 Sum_probs=60.7
Q ss_pred eecHHHHHHHHHhccc---ccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEecC-CCHHHHHHHHHHhCCcEEEe
Q 008636 208 VQCYKAFFIIAVDSLI---DWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRK-FDAPTVFALIRKHGVTHMCG 283 (558)
Q Consensus 208 ~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~-~~~~~~~~~i~~~~~t~l~~ 283 (558)
.+|+..+......... ..++.+++++....+-.. .....+++++..|+..+.++. ....++...++..++..++.
T Consensus 50 ~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~-~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~ 128 (537)
T PLN02246 50 VYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCP-EFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKLIIT 128 (537)
T ss_pred eeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCh-HHHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEEE
Confidence 5788888655443333 347888999988876652 233567788888999888764 67888999999999999988
Q ss_pred hHHHHHHH
Q 008636 284 APIVLNLL 291 (558)
Q Consensus 284 ~p~~l~~l 291 (558)
.......+
T Consensus 129 ~~~~~~~~ 136 (537)
T PLN02246 129 QSCYVDKL 136 (537)
T ss_pred ccchHHHH
Confidence 76655544
No 177
>PRK07638 acyl-CoA synthetase; Validated
Probab=47.66 E-value=1.1e+02 Score=31.50 Aligned_cols=86 Identities=6% Similarity=-0.016 Sum_probs=61.5
Q ss_pred ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchh-HHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEE
Q 008636 38 TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPA-MYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVF 116 (558)
Q Consensus 38 ~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (558)
-.+|.+.+...+...+ ...+++++|++....+-... ++...+..+..|+..+.. +..+...+...+++.++.++.
T Consensus 161 v~~s~~~~~~~~~~~~---~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 236 (487)
T PRK07638 161 FLRAQQSWLHSFDCNV---HDFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFIPNQVLDKLETENISVMY 236 (487)
T ss_pred EEEecHHHHHHHHHHH---HhcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCCHHHHHHHHHHcCCeEEE
Confidence 3578877766554433 34568899998887665433 355667778889988866 567788899999999999999
Q ss_pred EeCcChHHHHH
Q 008636 117 VDHLSSSLLLE 127 (558)
Q Consensus 117 ~~~~~~~~~~~ 127 (558)
..+.....+..
T Consensus 237 ~~P~~~~~l~~ 247 (487)
T PRK07638 237 TVPTMLESLYK 247 (487)
T ss_pred eCcHHHHHHHh
Confidence 87766655443
No 178
>PRK06164 acyl-CoA synthetase; Validated
Probab=47.58 E-value=1.1e+02 Score=31.93 Aligned_cols=96 Identities=16% Similarity=0.201 Sum_probs=67.8
Q ss_pred CCCceEEEC--C-------ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCch-hHHHHHHHHhhcCcEEEecccc
Q 008636 28 DDCPSIIYN--D-------TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIP-AMYELHFAVPMSGAIFNTINTR 97 (558)
Q Consensus 28 p~~~a~~~~--~-------~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~ 97 (558)
++.++++.. + ..+|.+.+...+..++..+ ++.+++++...+|-+- -.+..+++.+..|+..+.. +.
T Consensus 180 ~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~-~~ 255 (540)
T PRK06164 180 PDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAY---GYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCE-PV 255 (540)
T ss_pred CCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhc---CCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEec-CC
Confidence 466776651 1 3588888877666555544 6788999988887642 2345677888889887766 45
Q ss_pred CChHHHHHHHhhcCccEEEEeCcChHHHHH
Q 008636 98 LDARTISIILKHSESKLVFVDHLSSSLLLE 127 (558)
Q Consensus 98 ~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~ 127 (558)
.....+...+++.++.+++..+.....+..
T Consensus 256 ~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~ 285 (540)
T PRK06164 256 FDAARTARALRRHRVTHTFGNDEMLRRILD 285 (540)
T ss_pred CCHHHHHHHHHHhCCeeecCCHHHHHHHHH
Confidence 677888999999999999877655544433
No 179
>PRK08308 acyl-CoA synthetase; Validated
Probab=47.51 E-value=1.6e+02 Score=29.50 Aligned_cols=95 Identities=14% Similarity=0.168 Sum_probs=65.7
Q ss_pred CCCCceEEEC---------CccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCch--hHHHHHHHHhhcCcEEEecc
Q 008636 27 CDDCPSIIYN---------DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIP--AMYELHFAVPMSGAIFNTIN 95 (558)
Q Consensus 27 ~p~~~a~~~~---------~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~ 95 (558)
.++.++++.. +..+|++.+...+..+... .++..+|++...+|... .++..+++.+..|+..+..+
T Consensus 99 ~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~ 175 (414)
T PRK08308 99 LAEEPSLLQYSSGTTGEPKLIRRSWTEIDREIEAYNEA---LNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIIT 175 (414)
T ss_pred CCCCceEEEECCCCCCCCcEEEEehHhHHHHHHHHHHh---hCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecC
Confidence 3556665541 1468999887766555543 45678888877776543 34566788899999888765
Q ss_pred ccCChHHHHHHHhhcCccEEEEeCcChHHH
Q 008636 96 TRLDARTISIILKHSESKLVFVDHLSSSLL 125 (558)
Q Consensus 96 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 125 (558)
. .+...+...+++.++.+++..+.....+
T Consensus 176 ~-~~~~~~~~~l~~~~~t~~~~~P~~~~~l 204 (414)
T PRK08308 176 N-KNPKFALNILRNTPQHILYAVPLMLHIL 204 (414)
T ss_pred C-CCHHHHHHHHHHhCCeEEEcCHHHHHHH
Confidence 4 5677788889999999888766555444
No 180
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=47.42 E-value=1.7e+02 Score=27.87 Aligned_cols=92 Identities=14% Similarity=0.070 Sum_probs=60.0
Q ss_pred CCceEEECCccccHHHHHHHHHHHHHHHHhCCC-CCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHHHHH
Q 008636 29 DCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI-NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIIL 107 (558)
Q Consensus 29 ~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv-~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l 107 (558)
-++.+-.+..+-|.+-=.+.+..+.....+.|. .+|+.| +....+=.-..+.+++.+.|..+..+-|..........+
T Consensus 21 ~~i~~K~E~~nptGS~K~R~a~~~l~~a~~~g~~~~g~~v-v~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~~~ 99 (298)
T TIGR01139 21 ANVFVKLEGRNPSGSVKDRIALNMIWDAEKRGLLKPGKTI-VEPTSGNTGIALAMVAAARGYKLILTMPETMSIERRKLL 99 (298)
T ss_pred ceEEEEEcccCCCCcchHHHHHHHHHHHHHcCCCCCCCEE-EEeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHHHH
Confidence 356666655444432222333334445555664 677776 555556666667777888998888777766556668889
Q ss_pred hhcCccEEEEeCcC
Q 008636 108 KHSESKLVFVDHLS 121 (558)
Q Consensus 108 ~~~~~~~ii~~~~~ 121 (558)
+..++++++++...
T Consensus 100 ~~~GA~v~~~~~~~ 113 (298)
T TIGR01139 100 KAYGAELVLTPGAE 113 (298)
T ss_pred HHcCCEEEEECCCC
Confidence 99999999997753
No 181
>PRK06188 acyl-CoA synthetase; Validated
Probab=47.03 E-value=1.6e+02 Score=30.66 Aligned_cols=86 Identities=10% Similarity=0.063 Sum_probs=63.1
Q ss_pred ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEEE
Q 008636 38 TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFV 117 (558)
Q Consensus 38 ~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 117 (558)
..+|++.+...+.. .....++..++++....|-+..+...+++.+..|+..+..+ ..+...+...+++.++.+++.
T Consensus 186 v~~s~~~l~~~~~~---~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 261 (524)
T PRK06188 186 VMGTHRSIATMAQI---QLAEWEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLA-KFDPAEVLRAIEEQRITATFL 261 (524)
T ss_pred eeeehHHHHHHHHH---HHhhcCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcC-CCCHHHHHHHHHHhCCEEEEe
Confidence 35778777665543 33346788899999888887666666778888898888775 456788899999999999988
Q ss_pred eCcChHHHHH
Q 008636 118 DHLSSSLLLE 127 (558)
Q Consensus 118 ~~~~~~~~~~ 127 (558)
.+.....+.+
T Consensus 262 ~P~~l~~l~~ 271 (524)
T PRK06188 262 VPTMIYALLD 271 (524)
T ss_pred hHHHHHHHHh
Confidence 6655544443
No 182
>PRK07788 acyl-CoA synthetase; Validated
Probab=46.90 E-value=1.1e+02 Score=32.11 Aligned_cols=84 Identities=17% Similarity=0.103 Sum_probs=62.7
Q ss_pred eecHHHHHHHHHhcc---cccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEecC-CCHHHHHHHHHHhCCcEEEe
Q 008636 208 VQCYKAFFIIAVDSL---IDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRK-FDAPTVFALIRKHGVTHMCG 283 (558)
Q Consensus 208 ~~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~-~~~~~~~~~i~~~~~t~l~~ 283 (558)
.+|++.+........ ...++.+++++....+-.- .....+++++..|+..+.++. ...+++...+++.++..++.
T Consensus 74 ~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~-~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 152 (549)
T PRK07788 74 TLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHR-GFVLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKALVY 152 (549)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEEE
Confidence 478888865544333 3446788999988776532 233567888899999998874 67889999999999999999
Q ss_pred hHHHHHHHh
Q 008636 284 APIVLNLLS 292 (558)
Q Consensus 284 ~p~~l~~l~ 292 (558)
.+.....+.
T Consensus 153 ~~~~~~~~~ 161 (549)
T PRK07788 153 DDEFTDLLS 161 (549)
T ss_pred CchhHHHHH
Confidence 887766553
No 183
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=46.88 E-value=2.7e+02 Score=29.20 Aligned_cols=96 Identities=11% Similarity=0.055 Sum_probs=66.2
Q ss_pred CCCCceEEEC--C-------ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCch--hHHHHHHHHhhcCcEEEecc
Q 008636 27 CDDCPSIIYN--D-------TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIP--AMYELHFAVPMSGAIFNTIN 95 (558)
Q Consensus 27 ~p~~~a~~~~--~-------~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~ 95 (558)
.++.+|++.. + ..+|++.+...+.... ...++++++++....+-+. .++..+++.+..|+..+..+
T Consensus 195 ~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~---~~~~~~~~~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~~ 271 (547)
T PRK13295 195 GPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYA---ERLGLGADDVILMASPMAHQTGFMYGLMMPVMLGATAVLQD 271 (547)
T ss_pred CCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHH---HHhCCCCCCeEEEecCchhhhhHHHHHHHHHHcCCeEEeCC
Confidence 3466676541 1 3578888766555433 3457888999888877653 24556778888999987654
Q ss_pred ccCChHHHHHHHhhcCccEEEEeCcChHHHH
Q 008636 96 TRLDARTISIILKHSESKLVFVDHLSSSLLL 126 (558)
Q Consensus 96 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 126 (558)
..+.+.+...+++.++.+++........+.
T Consensus 272 -~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~ 301 (547)
T PRK13295 272 -IWDPARAAELIRTEGVTFTMASTPFLTDLT 301 (547)
T ss_pred -CCCHHHHHHHHHHcCCcEEEecHHHHHHHH
Confidence 567888899999999998887655444443
No 184
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=46.77 E-value=1.3e+02 Score=29.79 Aligned_cols=63 Identities=16% Similarity=0.174 Sum_probs=48.5
Q ss_pred HhCC-CCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEEEeC
Q 008636 57 SSFG-INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH 119 (558)
Q Consensus 57 ~~~G-v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 119 (558)
.+.| +++|....|....+-.-+.+.++|...|..+..+=|...+......++..++++++++.
T Consensus 102 ~~~G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 102 EKKNLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred HHcCCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 3455 57785455556677777778888899998888887777667778889999999999874
No 185
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=46.75 E-value=1.4e+02 Score=30.72 Aligned_cols=84 Identities=13% Similarity=0.167 Sum_probs=60.1
Q ss_pred cccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchh-HHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEEE
Q 008636 39 TYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPA-MYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFV 117 (558)
Q Consensus 39 ~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 117 (558)
.+|++.+...+... ....+++++|++...+|-... .+..+++.+..|+..+..+ ..+...+...+++.++.++..
T Consensus 160 ~~s~~~~~~~~~~~---~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 235 (483)
T PRK03640 160 IQTYGNHWWSAVGS---ALNLGLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVE-KFDAEKINKLLQTGGVTIISV 235 (483)
T ss_pred EEecHHHHHHHHHH---HHhcCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecC-CCCHHHHHHHHHHhCCcEEEe
Confidence 58888776544332 233688999999988875332 2334577777899888765 567888999999999999998
Q ss_pred eCcChHHHH
Q 008636 118 DHLSSSLLL 126 (558)
Q Consensus 118 ~~~~~~~~~ 126 (558)
.+.....+.
T Consensus 236 ~P~~~~~l~ 244 (483)
T PRK03640 236 VSTMLQRLL 244 (483)
T ss_pred HHHHHHHHH
Confidence 776555544
No 186
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=46.32 E-value=2e+02 Score=31.47 Aligned_cols=101 Identities=13% Similarity=0.001 Sum_probs=72.7
Q ss_pred eeecHHHHHHHHHhccc---ccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEec-CCCHHHHHHHHHHhCCcEEE
Q 008636 207 VVQCYKAFFIIAVDSLI---DWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLR-KFDAPTVFALIRKHGVTHMC 282 (558)
Q Consensus 207 v~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 282 (558)
..+|++.+......... ..++.+++++....+-... .+...++++..|+..+.+. ...++.+...+++.++.+++
T Consensus 105 ~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e-~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li 183 (696)
T PLN02387 105 EWITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAE-WLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVI 183 (696)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEE
Confidence 45788888655544433 4578899999888876432 2355677888899988776 57889999999999999999
Q ss_pred ehHHHHHHHhcCccccCCCCceEEEEec
Q 008636 283 GAPIVLNLLSSSPEAKQLDRPVRILTAG 310 (558)
Q Consensus 283 ~~p~~l~~l~~~~~~~~~~~l~~v~~~g 310 (558)
.....+..+.+.. ..++.++.++.-+
T Consensus 184 ~~~~~~~~l~~~~--~~~~~l~~ii~~~ 209 (696)
T PLN02387 184 CDSKQLKKLIDIS--SQLETVKRVIYMD 209 (696)
T ss_pred ECHHHHHHHHHHh--hccCCceEEEEEC
Confidence 9988887776542 2344566666544
No 187
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=46.12 E-value=1.3e+02 Score=33.04 Aligned_cols=91 Identities=11% Similarity=0.085 Sum_probs=62.5
Q ss_pred CCCCceEEEC---------CccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCc--hhHHHHHHHHhhcCcEEEecc
Q 008636 27 CDDCPSIIYN---------DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNI--PAMYELHFAVPMSGAIFNTIN 95 (558)
Q Consensus 27 ~p~~~a~~~~---------~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~ 95 (558)
.++.+|++.. +-.+|++.+...+..+.. ..++.++|++...+|-. ..+...+++.+..|+..+..+
T Consensus 363 ~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~ 439 (718)
T PRK08043 363 QPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKT---IADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYP 439 (718)
T ss_pred CCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHH---hhCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeC
Confidence 3566676541 246888888776655543 34788999998887753 344556788888999888765
Q ss_pred ccCChHHHHHHHhhcCccEEEEeCc
Q 008636 96 TRLDARTISIILKHSESKLVFVDHL 120 (558)
Q Consensus 96 ~~~~~~~l~~~l~~~~~~~ii~~~~ 120 (558)
.......+...+++.++.++.....
T Consensus 440 ~~~~~~~~~~~i~~~~vt~~~~~p~ 464 (718)
T PRK08043 440 SPLHYRIVPELVYDRNCTVLFGTST 464 (718)
T ss_pred CcccHHHHHHHHHhcCCeEEEchHH
Confidence 4445556677788899988776543
No 188
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=45.69 E-value=1.4e+02 Score=32.34 Aligned_cols=94 Identities=11% Similarity=0.050 Sum_probs=66.7
Q ss_pred CCCceEEEccCCCCCCCceeeecHHHHHHHHHhcc---cccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEec-C
Q 008636 188 DLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSL---IDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLR-K 263 (558)
Q Consensus 188 ~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~-~ 263 (558)
++.++++....+. + ....+|++.+........ ...++.++|++...+|..-. ....++++...|+..+.+. .
T Consensus 75 ~~~~A~~~~~~~~-~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e-~~~~~lA~~~~Gav~vpl~~~ 150 (647)
T PTZ00237 75 RDQDALIYECPYL-K--KTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLE-PLIAMLSCARIGATHCVLFDG 150 (647)
T ss_pred CCceEEEEEcCCC-C--ceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHhCcEEEeeCCC
Confidence 4566665432211 1 135689998865554433 45588999999999988543 2355778888899888775 5
Q ss_pred CCHHHHHHHHHHhCCcEEEehH
Q 008636 264 FDAPTVFALIRKHGVTHMCGAP 285 (558)
Q Consensus 264 ~~~~~~~~~i~~~~~t~l~~~p 285 (558)
+.++.+...+++.++.+++...
T Consensus 151 ~~~~~l~~~l~~~~~~~li~~~ 172 (647)
T PTZ00237 151 YSVKSLIDRIETITPKLIITTN 172 (647)
T ss_pred CCHHHHHHHHHhcCCCEEEEcc
Confidence 7899999999999999998764
No 189
>COG4821 Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain [General function prediction only]
Probab=45.09 E-value=62 Score=28.42 Aligned_cols=55 Identities=22% Similarity=0.237 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEEEeC
Q 008636 44 QTYRRCLQLASSLSS-FGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH 119 (558)
Q Consensus 44 ~l~~~v~~la~~L~~-~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 119 (558)
-..++.+.++.++.+ ++++++|...+++. +|..++|+ +++...+..++++|..+.
T Consensus 84 s~lErieg~~~~~l~~~~i~~~DVliviSn--------------SGrNpvpi-------e~A~~~rekGa~vI~vTS 139 (243)
T COG4821 84 SYLERIEGYAKLFLHRLQIRPNDVLIVISN--------------SGRNPVPI-------EVAEYAREKGAKVIAVTS 139 (243)
T ss_pred chhHhhhhHHHHHHHHhcCCCCCEEEEEeC--------------CCCCCcch-------HHHHHHHhcCCeEEEEeh
Confidence 346677778877665 79999997777766 57777777 467788889999887654
No 190
>PLN03102 acyl-activating enzyme; Provisional
Probab=44.31 E-value=1e+02 Score=32.75 Aligned_cols=83 Identities=12% Similarity=0.101 Sum_probs=61.8
Q ss_pred eecHHHHHHHHHhccc---ccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEec-CCCHHHHHHHHHHhCCcEEEe
Q 008636 208 VQCYKAFFIIAVDSLI---DWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLR-KFDAPTVFALIRKHGVTHMCG 283 (558)
Q Consensus 208 ~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 283 (558)
.+|++.+......... ..++..++++...+|..- .....+++++..|+..+.++ ..+++.+...+++.+++.++.
T Consensus 39 ~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~-e~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~ 117 (579)
T PLN03102 39 RFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTP-AMYEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFV 117 (579)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH-HHHHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEEE
Confidence 4788888655554443 347889999998888643 22345778888899888776 468899999999999999998
Q ss_pred hHHHHHHH
Q 008636 284 APIVLNLL 291 (558)
Q Consensus 284 ~p~~l~~l 291 (558)
.+.....+
T Consensus 118 ~~~~~~~~ 125 (579)
T PLN03102 118 DRSFEPLA 125 (579)
T ss_pred ChhhHHHH
Confidence 77655433
No 191
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=44.28 E-value=1.8e+02 Score=27.69 Aligned_cols=65 Identities=12% Similarity=0.135 Sum_probs=48.7
Q ss_pred HHHHhCC-CCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEEEeC
Q 008636 54 SSLSSFG-INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH 119 (558)
Q Consensus 54 ~~L~~~G-v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 119 (558)
....+.| +++|+ ..|=...+-.-+...+.|...|..++.+=|..-+.+...+|+.+++++++++.
T Consensus 51 ~~Ae~~G~l~pG~-tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 51 EDAEKRGLLKPGG-TIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HHHHHcCCCCCCC-EEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 3333456 78999 44544555566666777777898888888877777788999999999999987
No 192
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=44.24 E-value=1.9e+02 Score=31.07 Aligned_cols=96 Identities=14% Similarity=0.032 Sum_probs=67.5
Q ss_pred CCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcc---cccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEec-
Q 008636 187 SDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSL---IDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLR- 262 (558)
Q Consensus 187 ~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~- 262 (558)
.++.++++.... .+| ....+|++.+........ ...++.++|++...+|... -....+++++..|+..+.+.
T Consensus 70 ~p~~~Al~~~~~-~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~Gav~v~i~~ 145 (625)
T TIGR02188 70 RPDKVAIIWEGD-EPG--EVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIP-EAAIAMLACARIGAIHSVVFG 145 (625)
T ss_pred CCCCeEEEEEcC-CCC--ceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH-HHHHHHHHHHHhCCEEeccCC
Confidence 455677664322 122 234688888865554333 3457889999999888653 23456778888999888776
Q ss_pred CCCHHHHHHHHHHhCCcEEEehHH
Q 008636 263 KFDAPTVFALIRKHGVTHMCGAPI 286 (558)
Q Consensus 263 ~~~~~~~~~~i~~~~~t~l~~~p~ 286 (558)
.+.++.+...+++.++..++....
T Consensus 146 ~~~~~~l~~~l~~~~~~~li~~~~ 169 (625)
T TIGR02188 146 GFSAEALADRINDAGAKLVITADE 169 (625)
T ss_pred CCCHHHHHHHHHhcCCCEEEEcCc
Confidence 578899999999999999987654
No 193
>PRK07529 AMP-binding domain protein; Validated
Probab=44.10 E-value=1.7e+02 Score=31.62 Aligned_cols=94 Identities=13% Similarity=0.151 Sum_probs=63.1
Q ss_pred CCCCceEEEccC-CCCCCCceeeecHHHHHHHHHhcc---cccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEec
Q 008636 187 SDLDPMVLNYTW-GTTSAPKGVVQCYKAFFIIAVDSL---IDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLR 262 (558)
Q Consensus 187 ~~~~~~~i~~TS-GtTG~pk~v~~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~ 262 (558)
.++.++++.... +..+ +...+|++.+........ ...++.+++++...+|.... ....+++++..|. .+.+.
T Consensus 38 ~p~~~Al~~~~~~~~~~--~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e-~~~~~lA~~~~Gi-~~pi~ 113 (632)
T PRK07529 38 HPDAPALSFLLDADPLD--RPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPE-THFALWGGEAAGI-ANPIN 113 (632)
T ss_pred CCCCceEEeecccCCCC--CCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHhCE-EEeCC
Confidence 455677765433 2222 345688888865544433 34578899999999987543 2355667777774 34343
Q ss_pred -CCCHHHHHHHHHHhCCcEEEeh
Q 008636 263 -KFDAPTVFALIRKHGVTHMCGA 284 (558)
Q Consensus 263 -~~~~~~~~~~i~~~~~t~l~~~ 284 (558)
...++.+...+++.++.+++..
T Consensus 114 ~~~~~~~i~~~l~~~~~~~li~~ 136 (632)
T PRK07529 114 PLLEPEQIAELLRAAGAKVLVTL 136 (632)
T ss_pred CcCCHHHHHHHHHhcCCcEEEEe
Confidence 5678999999999999999885
No 194
>PRK06839 acyl-CoA synthetase; Validated
Probab=44.07 E-value=2.3e+02 Score=29.16 Aligned_cols=84 Identities=13% Similarity=0.023 Sum_probs=62.3
Q ss_pred eeecHHHHHHHHHhcccc----cccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEecC-CCHHHHHHHHHHhCCcEE
Q 008636 207 VVQCYKAFFIIAVDSLID----WVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRK-FDAPTVFALIRKHGVTHM 281 (558)
Q Consensus 207 v~~t~~~~~~~~~~~~~~----~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~-~~~~~~~~~i~~~~~t~l 281 (558)
..+|+..+.......... .++.+++++....+-... ....+++++..|+..+.++. .+++.+...+++.+++.+
T Consensus 26 ~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~-~~~~~la~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~i 104 (496)
T PRK06839 26 EEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLE-YIVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTVL 104 (496)
T ss_pred ceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEEecCcccCHHHHHHHHHhcCceEE
Confidence 467888886555444432 467888998887776532 34567788888998888774 678889999999999999
Q ss_pred EehHHHHHHH
Q 008636 282 CGAPIVLNLL 291 (558)
Q Consensus 282 ~~~p~~l~~l 291 (558)
+..+.....+
T Consensus 105 ~~~~~~~~~~ 114 (496)
T PRK06839 105 FVEKTFQNMA 114 (496)
T ss_pred EEcHHHHHHH
Confidence 9888766554
No 195
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=43.99 E-value=1.9e+02 Score=31.23 Aligned_cols=96 Identities=14% Similarity=0.032 Sum_probs=67.1
Q ss_pred CCCCceEEEccCCCCCCCceeeecHHHHHHHHHhccc---ccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEec-
Q 008636 187 SDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLI---DWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLR- 262 (558)
Q Consensus 187 ~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~- 262 (558)
.++.++++..... ......+|++.+......... ..++.++|++...+|.... ....+++++..|+..+.+.
T Consensus 80 ~p~~~Al~~~~~~---~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~Gav~v~l~~ 155 (637)
T PRK00174 80 RGDKVAIIWEGDD---PGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPE-AAVAMLACARIGAVHSVVFG 155 (637)
T ss_pred CCCCeEEEEECCC---CCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCEEEecCC
Confidence 3567776643211 113456899998655544433 4578899999988876432 2355778888999988876
Q ss_pred CCCHHHHHHHHHHhCCcEEEehHH
Q 008636 263 KFDAPTVFALIRKHGVTHMCGAPI 286 (558)
Q Consensus 263 ~~~~~~~~~~i~~~~~t~l~~~p~ 286 (558)
...++.+...+++.++..++....
T Consensus 156 ~~~~~~l~~~l~~~~~~~li~~~~ 179 (637)
T PRK00174 156 GFSAEALADRIIDAGAKLVITADE 179 (637)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcCc
Confidence 467899999999999999987653
No 196
>PLN03013 cysteine synthase
Probab=43.63 E-value=1.6e+02 Score=29.77 Aligned_cols=80 Identities=19% Similarity=0.161 Sum_probs=56.5
Q ss_pred cccHHHHHHHHHHHHHHHHhCC-CCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEEE
Q 008636 39 TYTWSQTYRRCLQLASSLSSFG-INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFV 117 (558)
Q Consensus 39 ~~Ty~~l~~~v~~la~~L~~~G-v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 117 (558)
+-|+++ +-+..+-..+.+.| +++|....|....+-.-+.+.++|...|..+..+=|...+......++..+++++++
T Consensus 150 tGSfKd--R~A~~~l~~a~~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v 227 (429)
T PLN03013 150 CCSVKD--RIGYSMVTDAEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLT 227 (429)
T ss_pred ccccHH--HHHHHHHHHHHHcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEE
Confidence 445554 23333333444556 478866666677777777778888889988887777777777788899999999999
Q ss_pred eCc
Q 008636 118 DHL 120 (558)
Q Consensus 118 ~~~ 120 (558)
++.
T Consensus 228 ~~~ 230 (429)
T PLN03013 228 DPA 230 (429)
T ss_pred CCC
Confidence 764
No 197
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=43.54 E-value=1.4e+02 Score=31.39 Aligned_cols=85 Identities=15% Similarity=0.098 Sum_probs=64.3
Q ss_pred eecHHHHHHHHHhccc---ccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEec-CCCHHHHHHHHHHhCCcEEEe
Q 008636 208 VQCYKAFFIIAVDSLI---DWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLR-KFDAPTVFALIRKHGVTHMCG 283 (558)
Q Consensus 208 ~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 283 (558)
.+|++.+......... ..++.+++++....|..... +...++++..|+..+.++ ..+.+++...+++.+++.++.
T Consensus 46 ~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~ 124 (542)
T PRK06155 46 RWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEF-LDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVV 124 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEE
Confidence 5788887655544443 34678899988887765432 466788899999998886 467899999999999999999
Q ss_pred hHHHHHHHhc
Q 008636 284 APIVLNLLSS 293 (558)
Q Consensus 284 ~p~~l~~l~~ 293 (558)
....+..+.+
T Consensus 125 ~~~~~~~~~~ 134 (542)
T PRK06155 125 EAALLAALEA 134 (542)
T ss_pred ChhhHHHHHH
Confidence 8877766543
No 198
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=43.23 E-value=1.9e+02 Score=31.26 Aligned_cols=94 Identities=11% Similarity=-0.040 Sum_probs=66.3
Q ss_pred CCCceEEEccCCCCCCCceeeecHHHHHHHHHhcc---cccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEec-C
Q 008636 188 DLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSL---IDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLR-K 263 (558)
Q Consensus 188 ~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~-~ 263 (558)
++.++++.... .| ....+|++.+........ ...++.++|++...+|... -....+++++..|+..+.+. .
T Consensus 98 ~~~~Al~~~~~--~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~-e~v~~~lA~~~~Gav~v~l~~~ 172 (655)
T PRK03584 98 DDRPAIIFRGE--DG--PRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIP-ETVVAMLATASLGAIWSSCSPD 172 (655)
T ss_pred CCCeEEEEECC--CC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHHcCcEEEeeCCC
Confidence 45666654322 22 134578888865554433 3457889999999988643 23456788888999988876 4
Q ss_pred CCHHHHHHHHHHhCCcEEEehHH
Q 008636 264 FDAPTVFALIRKHGVTHMCGAPI 286 (558)
Q Consensus 264 ~~~~~~~~~i~~~~~t~l~~~p~ 286 (558)
+..+.+...++..++..++....
T Consensus 173 ~~~~~l~~~l~~~~~~~li~~~~ 195 (655)
T PRK03584 173 FGVQGVLDRFGQIEPKVLIAVDG 195 (655)
T ss_pred CCHHHHHHHHHHcCCcEEEEccc
Confidence 67899999999999999988653
No 199
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=43.17 E-value=94 Score=32.59 Aligned_cols=88 Identities=11% Similarity=0.038 Sum_probs=68.2
Q ss_pred eeeecHHHHHHHHHhccccc-----ccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEec-CCCHHHHHHHHHHhCCc
Q 008636 206 GVVQCYKAFFIIAVDSLIDW-----VVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLR-KFDAPTVFALIRKHGVT 279 (558)
Q Consensus 206 ~v~~t~~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t 279 (558)
+..+|+..+...+...+..+ +...+|++....|..... ....++++..|+.+.... ..+...+...++.-++.
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~-~~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~k 121 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEF-VELALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPK 121 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCccccccCcccCHHHHHHHHHhcCCe
Confidence 67889998876666555544 267899999999986432 245677888899887776 47899999999999999
Q ss_pred EEEehHHHHHHHhcC
Q 008636 280 HMCGAPIVLNLLSSS 294 (558)
Q Consensus 280 ~l~~~p~~l~~l~~~ 294 (558)
+++.....+..+...
T Consensus 122 iif~d~~~~~~i~~~ 136 (537)
T KOG1176|consen 122 LIFVDEDFYDKISEA 136 (537)
T ss_pred EEEEcCchHHHHHHH
Confidence 999998888777544
No 200
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=43.04 E-value=54 Score=25.91 Aligned_cols=41 Identities=22% Similarity=0.255 Sum_probs=33.1
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcE
Q 008636 50 LQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAI 90 (558)
Q Consensus 50 ~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (558)
..+...+.+.|+.+++.|.++|..+.....+.+.+..+|..
T Consensus 64 ~~~~~~~~~~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~~ 104 (118)
T cd01449 64 EELRALFAALGITPDKPVIVYCGSGVTACVLLLALELLGYK 104 (118)
T ss_pred HHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 45667778889989999999999988877777777788863
No 201
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=42.82 E-value=2.3e+02 Score=26.01 Aligned_cols=92 Identities=14% Similarity=-0.047 Sum_probs=57.4
Q ss_pred CCceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHHHHHh
Q 008636 29 DCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILK 108 (558)
Q Consensus 29 ~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~ 108 (558)
.++.+-.+...-|.+-=.+.+..+...+.+.|..++..|.. ...+-....+.++|...|..+..+-|..........++
T Consensus 15 ~~l~~K~e~~~ptgS~K~R~a~~~l~~a~~~g~~~~~~vv~-~ssGN~g~alA~~a~~~g~~~~v~~p~~~~~~~~~~~~ 93 (244)
T cd00640 15 ANIYLKLEFLNPTGSFKDRGALNLILLAEEEGKLPKGVIIE-STGGNTGIALAAAAARLGLKCTIVMPEGASPEKVAQMR 93 (244)
T ss_pred CEEEEEecccCCcCCcHHHHHHHHHHHHHHcCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHH
Confidence 45555555543332111222333344455544334555544 44466667777778789988888877777777788899
Q ss_pred hcCccEEEEeCcC
Q 008636 109 HSESKLVFVDHLS 121 (558)
Q Consensus 109 ~~~~~~ii~~~~~ 121 (558)
..+.+++.++...
T Consensus 94 ~~Ga~v~~~~~~~ 106 (244)
T cd00640 94 ALGAEVVLVPGDF 106 (244)
T ss_pred HCCCEEEEECCCH
Confidence 9999999988763
No 202
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=42.81 E-value=1.4e+02 Score=28.62 Aligned_cols=89 Identities=11% Similarity=0.087 Sum_probs=58.3
Q ss_pred CCceEEECCc--cccHHHHHHHHHHHHHHHHhCCC-CCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHHH
Q 008636 29 DCPSIIYNDT--TYTWSQTYRRCLQLASSLSSFGI-NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISI 105 (558)
Q Consensus 29 ~~~a~~~~~~--~~Ty~~l~~~v~~la~~L~~~Gv-~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 105 (558)
.++.+-.++. +-+|++ +.+..+...+.+.|. .+|+.| +....+-.-..+.++|...|..+..+-|...+.....
T Consensus 22 ~~i~~K~E~~~ptGS~K~--R~a~~~~~~a~~~g~~~~g~~v-v~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~ 98 (299)
T TIGR01136 22 ARVLAKLEGRNPSGSVKD--RIALSMIEDAEKRGLLKPGDTI-IEATSGNTGIALAMVAAAKGYKLILTMPETMSLERRK 98 (299)
T ss_pred ceEEEEEcccCCCCCccH--HHHHHHHHHHHHcCCCCCCCEE-EEeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHH
Confidence 3455555443 334443 333334444555564 677766 4566666667777788889988887777665566667
Q ss_pred HHhhcCccEEEEeCc
Q 008636 106 ILKHSESKLVFVDHL 120 (558)
Q Consensus 106 ~l~~~~~~~ii~~~~ 120 (558)
.++..++++++++..
T Consensus 99 ~~~~~GA~v~~~~~~ 113 (299)
T TIGR01136 99 LLRAYGAELILTPAE 113 (299)
T ss_pred HHHHcCCEEEEeCCC
Confidence 899999999998764
No 203
>PRK07470 acyl-CoA synthetase; Validated
Probab=42.67 E-value=2.8e+02 Score=28.85 Aligned_cols=100 Identities=16% Similarity=0.112 Sum_probs=62.0
Q ss_pred CCCCceEEEC---------CccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEecc-c
Q 008636 27 CDDCPSIIYN---------DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTIN-T 96 (558)
Q Consensus 27 ~p~~~a~~~~---------~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~-~ 96 (558)
.++.+|++.. +..+|++.+...+......+. .++.++|++..++|-+..+-...+..+..|+..+.+. .
T Consensus 161 ~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~-~~~~~~d~~l~~~p~~~~~~~~~~~~~~~g~~~~~~~~~ 239 (528)
T PRK07470 161 DHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLM-PGTTEQDASLVVAPLSHGAGIHQLCQVARGAATVLLPSE 239 (528)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhc-cCCCcccEEEEeccchhHHHHHHHHHHhcCceEEEeccc
Confidence 3456666552 135788877543332211111 2567889888888866544333333445565555443 4
Q ss_pred cCChHHHHHHHhhcCccEEEEeCcChHHHHH
Q 008636 97 RLDARTISIILKHSESKLVFVDHLSSSLLLE 127 (558)
Q Consensus 97 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~ 127 (558)
..+.+.+...+++.++.++...+.....+..
T Consensus 240 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 270 (528)
T PRK07470 240 RFDPAEVWALVERHRVTNLFTVPTILKMLVE 270 (528)
T ss_pred CcCHHHHHHHHHhcCCeEEechHHHHHHHHh
Confidence 5678889999999999999887766655543
No 204
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=42.36 E-value=2.7e+02 Score=26.88 Aligned_cols=89 Identities=11% Similarity=0.044 Sum_probs=58.4
Q ss_pred CCceEEECC--ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHHHH
Q 008636 29 DCPSIIYND--TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISII 106 (558)
Q Consensus 29 ~~~a~~~~~--~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 106 (558)
.++.+-.+. ..-|+++ +.+..+-..+.+.|..+++.|...+ .+-.-..+.++|...|..+..+-|...+......
T Consensus 16 ~~i~~K~E~~nptGS~K~--R~a~~~l~~a~~~g~~~~~~vv~aS-sGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~ 92 (316)
T cd06448 16 CNVFLKLENLQPSGSFKI--RGIGHLCQKSAKQGLNECVHVVCSS-GGNAGLAAAYAARKLGVPCTIVVPESTKPRVVEK 92 (316)
T ss_pred CeEEEEeccCCCcCChHH--HHHHHHHHHHHHhhcccCCeEEEeC-CcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH
Confidence 356665544 3444554 2233333333444444466655544 4666777778888999988888887777778888
Q ss_pred HhhcCccEEEEeCc
Q 008636 107 LKHSESKLVFVDHL 120 (558)
Q Consensus 107 l~~~~~~~ii~~~~ 120 (558)
++..++++++++..
T Consensus 93 l~~~GA~v~~~~~~ 106 (316)
T cd06448 93 LRDEGATVVVHGKV 106 (316)
T ss_pred HHHcCCEEEEECCc
Confidence 99999999998765
No 205
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=42.06 E-value=2.5e+02 Score=32.89 Aligned_cols=97 Identities=12% Similarity=0.079 Sum_probs=68.1
Q ss_pred CCCCceEEEC---------CccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCc--hhHHHHHHHHhhcCcEEEecc
Q 008636 27 CDDCPSIIYN---------DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNI--PAMYELHFAVPMSGAIFNTIN 95 (558)
Q Consensus 27 ~p~~~a~~~~---------~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~ 95 (558)
.++.+|++.. +..+|.+.+...+..+.. ..++.++|++...+|-. ..+....++.+..|+..+...
T Consensus 780 ~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~~~ 856 (1146)
T PRK08633 780 KPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISD---VFNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVYHP 856 (1146)
T ss_pred CCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHH---hcCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEEeC
Confidence 4567776642 246888888776655443 34678899887776643 233444677778898888776
Q ss_pred ccCChHHHHHHHhhcCccEEEEeCcChHHHH
Q 008636 96 TRLDARTISIILKHSESKLVFVDHLSSSLLL 126 (558)
Q Consensus 96 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 126 (558)
...+.+.+.+.+++.++.++.+.+.....+.
T Consensus 857 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 887 (1146)
T PRK08633 857 DPTDALGIAKLVAKHRATILLGTPTFLRLYL 887 (1146)
T ss_pred CCCCHHHHHHHHHHcCCeEEEecHHHHHHHH
Confidence 6677888999999999999998776555443
No 206
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=41.35 E-value=2.4e+02 Score=30.51 Aligned_cols=93 Identities=14% Similarity=0.009 Sum_probs=65.6
Q ss_pred CCceEEEccCCCCCCCceeeecHHHHHHHHHhcc---cccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEec-CC
Q 008636 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSL---IDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLR-KF 264 (558)
Q Consensus 189 ~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~-~~ 264 (558)
++++++.... +|. ...+|++.+........ ...++.++|++...+|.... .....++++..|+..+.+. .+
T Consensus 99 ~~~a~~~~~~--~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e-~~~~~lA~~~~Gav~vp~~~~~ 173 (652)
T TIGR01217 99 TEPALLYVDE--THE--PAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQ-AVVAMLATASVGAIWSSCSPDF 173 (652)
T ss_pred CCeEEEEECC--CCC--eeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHhCeEEEecCCCC
Confidence 4556555422 222 24578888865554433 34578999999999887532 3455778888899888776 47
Q ss_pred CHHHHHHHHHHhCCcEEEehHH
Q 008636 265 DAPTVFALIRKHGVTHMCGAPI 286 (558)
Q Consensus 265 ~~~~~~~~i~~~~~t~l~~~p~ 286 (558)
..+.+...+++.++..++....
T Consensus 174 ~~~~l~~~l~~~~~k~li~~~~ 195 (652)
T TIGR01217 174 GARGVLDRFQQIEPKLLFTVDG 195 (652)
T ss_pred CHHHHHHHHHhcCCcEEEEccc
Confidence 8899999999999999987643
No 207
>PLN02654 acetate-CoA ligase
Probab=41.18 E-value=1.7e+02 Score=31.77 Aligned_cols=95 Identities=15% Similarity=0.024 Sum_probs=67.0
Q ss_pred CCCceEEEccCCCCCCCceeeecHHHHHHHHHhc---ccccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEec-C
Q 008636 188 DLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDS---LIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLR-K 263 (558)
Q Consensus 188 ~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~-~ 263 (558)
++.++++..... .+ ....+|++.+....... ....+++++|++...+|... -....+++++..|+..+.+. .
T Consensus 103 ~~~~Al~~~~~~-~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~-e~v~a~lA~~~~Gav~vpv~~~ 178 (666)
T PLN02654 103 GDKIAIYWEGNE-PG--FDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLM-ELPIAMLACARIGAVHSVVFAG 178 (666)
T ss_pred CCCEEEEEEcCC-CC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHHcCCEEEecCCC
Confidence 456666542211 11 13468999886555443 34567899999999988743 23456778888999888775 5
Q ss_pred CCHHHHHHHHHHhCCcEEEehHH
Q 008636 264 FDAPTVFALIRKHGVTHMCGAPI 286 (558)
Q Consensus 264 ~~~~~~~~~i~~~~~t~l~~~p~ 286 (558)
+.++.+...++..++.++++...
T Consensus 179 ~~~~~l~~~l~~~~~~~li~~~~ 201 (666)
T PLN02654 179 FSAESLAQRIVDCKPKVVITCNA 201 (666)
T ss_pred CCHHHHHHHHHhcCceEEEEcCc
Confidence 78999999999999999987654
No 208
>cd06404 PB1_aPKC PB1 domain is an essential modular domain of the atypical protein kinase C (aPKC) which in complex with Par6 and Par3 proteins is crucial for establishment of apical-basal polarity of animal cells. PB1 domain is a modular domain mediating specific protein-protein interaction which play roles in many critical cell processes. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi,
Probab=41.04 E-value=74 Score=23.49 Aligned_cols=58 Identities=5% Similarity=-0.063 Sum_probs=42.0
Q ss_pred CCceEEECCccccHHHHHHHHHHHHHHHHhCCC------CCCCEEEEEcCCchhHHHHHHHHhh
Q 008636 29 DCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI------NPGHVVSVIAPNIPAMYELHFAVPM 86 (558)
Q Consensus 29 ~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv------~~gd~V~i~~~~~~~~~~~~lA~~~ 86 (558)
..+.+...+..+||.+|.+++..+.+......+ ..||.|.|.+.--.+..+=++-..+
T Consensus 9 gdi~it~~d~~~s~e~L~~~v~~~c~~~~~q~ft~kw~DEEGDp~tiSS~~EL~EA~rl~~~n~ 72 (83)
T cd06404 9 GDIMITSIDPSISLEELCNEVRDMCRFHNDQPFTLKWIDEEGDPCTISSQMELEEAFRLYELNK 72 (83)
T ss_pred CcEEEEEcCCCcCHHHHHHHHHHHhCCCCCCcEEEEEECCCCCceeecCHHHHHHHHHHHHhcC
Confidence 345555566799999999999999999887543 6699998887766555544444433
No 209
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=40.93 E-value=1.8e+02 Score=31.25 Aligned_cols=94 Identities=14% Similarity=0.087 Sum_probs=65.9
Q ss_pred CCCceEEEccCCCCCCCceeeecHHHHHHHHHhc---ccccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEec-C
Q 008636 188 DLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDS---LIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLR-K 263 (558)
Q Consensus 188 ~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~-~ 263 (558)
++.++++... ..+|. .-.+|++.+....... ....++.++|++...+|... -....+++++..|+..+.+. .
T Consensus 66 p~~~Al~~~~-~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~-e~v~~~lA~~~~Gav~vpl~~~ 141 (628)
T TIGR02316 66 GEQLALVTVS-SETGQ--ERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIA-EAVFAMLACARIGAIHSVVFGG 141 (628)
T ss_pred CCCeEEEEEc-CCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHHhCCEEEecCCC
Confidence 4566665432 22222 2357888886554433 34558899999999988753 23456778888999888776 4
Q ss_pred CCHHHHHHHHHHhCCcEEEehH
Q 008636 264 FDAPTVFALIRKHGVTHMCGAP 285 (558)
Q Consensus 264 ~~~~~~~~~i~~~~~t~l~~~p 285 (558)
+..+.+...+++.++..++...
T Consensus 142 ~~~~~l~~~l~~~~~~~li~~~ 163 (628)
T TIGR02316 142 FASHSLALRIDDATPKLIVSAD 163 (628)
T ss_pred CCHHHHHHHHHhcCceEEEECC
Confidence 7789999999999999988754
No 210
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=40.82 E-value=2.6e+02 Score=30.93 Aligned_cols=116 Identities=13% Similarity=0.168 Sum_probs=77.5
Q ss_pred CCCceEEEccCCCCCCCceeeecHHHHHHHHHhcccc------cccCCC-----------CEEEEecCchhhhhhhHHHH
Q 008636 188 DLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLID------WVVPKQ-----------SVLLWTLPMFHNNGWSFTWG 250 (558)
Q Consensus 188 ~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~~------~~~~~~-----------~~~~~~~p~~~~~g~~~~~~ 250 (558)
++.++++....|. + ...+|++.+.......... .++.++ +++....+-+. -.+...++
T Consensus 75 p~~~Al~~~~~g~---~-~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~-ew~~~~lA 149 (746)
T PTZ00342 75 NNKIAIVEHSCGE---P-QNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSI-NWLVADLA 149 (746)
T ss_pred CCceeEeccCCCC---C-ceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCH-HHHHHHHH
Confidence 4566665432221 1 2357888876554433332 256666 78877776542 22356778
Q ss_pred HHHhcceEEEec-CCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCccccCCCCceEEEEec
Q 008636 251 AAVVGATNVCLR-KFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAG 310 (558)
Q Consensus 251 ~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~~l~~v~~~g 310 (558)
++..|+..+.+. .+.++.+...+++-++.+++..+..+..+.+.. ..++.++.+++-+
T Consensus 150 ~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~--~~~~~l~~ii~~~ 208 (746)
T PTZ00342 150 CMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERK--NELPHLKKLIILD 208 (746)
T ss_pred HHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhh--ccCCCceEEEEEC
Confidence 888999988876 578999999999999999999888887776543 2355677766654
No 211
>PLN02574 4-coumarate--CoA ligase-like
Probab=40.21 E-value=2.8e+02 Score=29.29 Aligned_cols=98 Identities=13% Similarity=0.057 Sum_probs=67.4
Q ss_pred CCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcc---cc-cccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEec
Q 008636 187 SDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSL---ID-WVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLR 262 (558)
Q Consensus 187 ~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~---~~-~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~ 262 (558)
.++.++++...+| ..+|+..+........ .. .++.++|++....+-.. .....+++++..|+..+.++
T Consensus 52 ~~~~~a~~~~~~~-------~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~-~~~~~~la~~~~G~v~v~l~ 123 (560)
T PLN02574 52 HNGDTALIDSSTG-------FSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSV-YFPVIFLAVLSLGGIVTTMN 123 (560)
T ss_pred cCCCCEEEECCCC-------CcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcc-hHHHHHHHHHHhCeEEeCcC
Confidence 3456666642222 1367887754443333 33 56889999998887543 23355788888999988876
Q ss_pred C-CCHHHHHHHHHHhCCcEEEehHHHHHHHh
Q 008636 263 K-FDAPTVFALIRKHGVTHMCGAPIVLNLLS 292 (558)
Q Consensus 263 ~-~~~~~~~~~i~~~~~t~l~~~p~~l~~l~ 292 (558)
+ ....++...+++.++..++..+.....+.
T Consensus 124 p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 154 (560)
T PLN02574 124 PSSSLGEIKKRVVDCSVGLAFTSPENVEKLS 154 (560)
T ss_pred cccCHHHHHHHHHhcCCEEEEECHHHHHHHH
Confidence 4 57888999999999999988887666553
No 212
>PF09580 Spore_YhcN_YlaJ: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); InterPro: IPR019076 This entry contains YhcN and YlaJ, which are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic, 40-residue C-terminal domain.
Probab=40.03 E-value=70 Score=27.74 Aligned_cols=26 Identities=27% Similarity=0.266 Sum_probs=21.5
Q ss_pred chHHHHHHHhcCCCcceeEEEeeeCC
Q 008636 455 SSTEIESVLYSHPMVNEAAVVGRPDP 480 (558)
Q Consensus 455 ~~~~iE~~l~~~~~v~~~~v~~~~~~ 480 (558)
-...|++.+.+.++|.++.|+...+.
T Consensus 76 ~a~~i~~~v~~~~~V~~A~vvv~~~~ 101 (177)
T PF09580_consen 76 LADRIANRVKKVPGVEDATVVVTDDN 101 (177)
T ss_pred HHHHHHHHHhcCCCceEEEEEEECCE
Confidence 35678899999999999999987544
No 213
>PRK11761 cysM cysteine synthase B; Provisional
Probab=39.90 E-value=1.7e+02 Score=27.93 Aligned_cols=87 Identities=14% Similarity=0.136 Sum_probs=59.3
Q ss_pred CceEEECC--ccccHHHHHHHHHHHHHHHHhCC-CCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHHHH
Q 008636 30 CPSIIYND--TTYTWSQTYRRCLQLASSLSSFG-INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISII 106 (558)
Q Consensus 30 ~~a~~~~~--~~~Ty~~l~~~v~~la~~L~~~G-v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 106 (558)
++.+-.+. .+=||++ +-+..+...+.+.| +.+|+.|.. ...+=.-..+.++|...|..+..+=|...+......
T Consensus 28 ~i~~K~E~~nptGS~K~--R~a~~~~~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~ 104 (296)
T PRK11761 28 TILAKLEGNNPAGSVKD--RPALSMIVQAEKRGEIKPGDTLIE-ATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAA 104 (296)
T ss_pred EEEEEEcccCCCCCchh--HHHHHHHHHHHHcCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH
Confidence 45555544 3445554 33444445555566 467776544 555666677777888899888877777666677888
Q ss_pred HhhcCccEEEEeC
Q 008636 107 LKHSESKLVFVDH 119 (558)
Q Consensus 107 l~~~~~~~ii~~~ 119 (558)
++..++++++++.
T Consensus 105 ~~~~GA~v~~~~~ 117 (296)
T PRK11761 105 MRAYGAELILVPK 117 (296)
T ss_pred HHHcCCEEEEeCC
Confidence 9999999999986
No 214
>PRK05850 acyl-CoA synthetase; Validated
Probab=39.42 E-value=3.1e+02 Score=29.04 Aligned_cols=83 Identities=12% Similarity=0.025 Sum_probs=60.0
Q ss_pred eeecHHHHHHHHHhccc---ccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEecC----CCHHHHHHHHHHhCCc
Q 008636 207 VVQCYKAFFIIAVDSLI---DWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRK----FDAPTVFALIRKHGVT 279 (558)
Q Consensus 207 v~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~----~~~~~~~~~i~~~~~t 279 (558)
..+|+..+......... ..+ .++|++....+... ......++++..|+..+.++. ...+.+...+++.++.
T Consensus 34 ~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~-~~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~ 111 (578)
T PRK05850 34 ETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGL-EYIVAFLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTSPS 111 (578)
T ss_pred eeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcc-cHHHHHHHHHHcCceEEecCCCCccchHHHHHHHHHhcCCC
Confidence 46788888654443333 234 46899888887643 334567888899999998863 3567888999999999
Q ss_pred EEEehHHHHHHH
Q 008636 280 HMCGAPIVLNLL 291 (558)
Q Consensus 280 ~l~~~p~~l~~l 291 (558)
.++..+.....+
T Consensus 112 ~il~~~~~~~~~ 123 (578)
T PRK05850 112 VVLTTSAVVDDV 123 (578)
T ss_pred EEEEcHHHHHHH
Confidence 999988766654
No 215
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=39.29 E-value=2.4e+02 Score=26.85 Aligned_cols=90 Identities=13% Similarity=0.107 Sum_probs=59.2
Q ss_pred CCceEEECCccccHHHHHHHHHHHHHHHHhCCC-CCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHHHHH
Q 008636 29 DCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI-NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIIL 107 (558)
Q Consensus 29 ~~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv-~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l 107 (558)
.++.+-.+..+-|-+-=.+.+..+.....+.|. .+|+.|.. +..+-.-..+.++|...|..+..+-|...+......+
T Consensus 23 ~~i~~K~E~~nptGS~K~R~a~~~v~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~ 101 (290)
T TIGR01138 23 SEVWLKLEGNNPAGSVKDRPALSMIVEAEKRGEIKPGDVLIE-ATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKAAM 101 (290)
T ss_pred CeEEEEEccCCCCccHHHHHHHHHHHHHHHcCCCCCCCEEEE-ECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHH
Confidence 356666655444432223333344444455554 67776644 5566667777778888998888877776666677789
Q ss_pred hhcCccEEEEeC
Q 008636 108 KHSESKLVFVDH 119 (558)
Q Consensus 108 ~~~~~~~ii~~~ 119 (558)
+..++++++++.
T Consensus 102 ~~~GA~v~~v~~ 113 (290)
T TIGR01138 102 RAYGAELILVTK 113 (290)
T ss_pred HHcCCEEEEeCC
Confidence 999999999875
No 216
>PRK07476 eutB threonine dehydratase; Provisional
Probab=38.77 E-value=2.2e+02 Score=27.52 Aligned_cols=90 Identities=18% Similarity=0.023 Sum_probs=54.5
Q ss_pred CceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHHHHHhh
Q 008636 30 CPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKH 109 (558)
Q Consensus 30 ~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~ 109 (558)
++.+-.+..+-|-+-=.+.+..+-..+.+.|.++| | +....+=.-..+.++|...|..+..+=|...+......++.
T Consensus 35 ~l~~K~E~~nptGS~K~R~a~~~i~~a~~~~~~~g--v-v~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~ 111 (322)
T PRK07476 35 PVWLKLETLQPTGSFKLRGATNALLSLSAQERARG--V-VTASTGNHGRALAYAARALGIRATICMSRLVPANKVDAIRA 111 (322)
T ss_pred eEEEEEccCCCCCCchHHHHHHHHHhhhhhhhCCe--E-EEECCChHHHHHHHHHHHhCCCEEEEeCCCCCHHHHHHHHH
Confidence 45555555333322112222222233444444333 3 34455666777778888999887777776666667778899
Q ss_pred cCccEEEEeCcCh
Q 008636 110 SESKLVFVDHLSS 122 (558)
Q Consensus 110 ~~~~~ii~~~~~~ 122 (558)
.++++++++....
T Consensus 112 ~GA~V~~~~~~~~ 124 (322)
T PRK07476 112 LGAEVRIVGRSQD 124 (322)
T ss_pred cCCEEEEECCCHH
Confidence 9999999986543
No 217
>PLN00011 cysteine synthase
Probab=38.77 E-value=2.4e+02 Score=27.40 Aligned_cols=90 Identities=14% Similarity=0.024 Sum_probs=59.0
Q ss_pred CceEEECCccccHHHHHHHHHHHHHHHHhCC-CCCC-CEEEEEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHHHHH
Q 008636 30 CPSIIYNDTTYTWSQTYRRCLQLASSLSSFG-INPG-HVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIIL 107 (558)
Q Consensus 30 ~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~G-v~~g-d~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l 107 (558)
++.+-.+..+=|.+-=.+.+..+-..+.+.| +.+| +.|. ....+-.-..+.++|...|..+..+=|...+......+
T Consensus 33 ~i~~K~E~~nPtGS~K~R~a~~~l~~a~~~g~~~~g~~~vv-~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i 111 (323)
T PLN00011 33 RIAAKLEMMEPCSSVKDRIAYSMIKDAEDKGLITPGKSTLI-EATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIIL 111 (323)
T ss_pred eEEEEecccCCccccchHHHHHHHHHHHHcCCCCCCCcEEE-EeCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHH
Confidence 4555554433333222333444444455555 6777 5554 46666677777788888998888777766666778889
Q ss_pred hhcCccEEEEeCc
Q 008636 108 KHSESKLVFVDHL 120 (558)
Q Consensus 108 ~~~~~~~ii~~~~ 120 (558)
+..++++++++..
T Consensus 112 ~~~GA~V~~~~~~ 124 (323)
T PLN00011 112 RALGAEVHLTDQS 124 (323)
T ss_pred HHcCCEEEEECCC
Confidence 9999999998764
No 218
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=38.64 E-value=2.8e+02 Score=24.58 Aligned_cols=110 Identities=12% Similarity=0.051 Sum_probs=0.0
Q ss_pred HHHHHHHHhcccccccCCCCEEEEecCc--hhhhhhhHHHHHHHh-cceEEEec-CCCHHHHHHHHHHhCCcEEEehH--
Q 008636 212 KAFFIIAVDSLIDWVVPKQSVLLWTLPM--FHNNGWSFTWGAAVV-GATNVCLR-KFDAPTVFALIRKHGVTHMCGAP-- 285 (558)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~~~g~~~~~~~l~~-g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p-- 285 (558)
+..+................+++...+- .|..|...+...+-. |-.++.+. ...++++.+.+.+.+|+++..+-
T Consensus 64 ~~~l~~l~~~~~~~~~~~~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~ 143 (201)
T cd02070 64 KAGLDLLKPLLGKSKSAKKGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALM 143 (201)
T ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc
Q ss_pred ----HHHHHHhcCccccCCCCceEEEEecCCCChhhhHHh
Q 008636 286 ----IVLNLLSSSPEAKQLDRPVRILTAGSPPPAPVLLRT 321 (558)
Q Consensus 286 ----~~l~~l~~~~~~~~~~~l~~v~~~g~~l~~~~~~~~ 321 (558)
..+..+.+..+......--.+++||..++.+..+.+
T Consensus 144 ~~~~~~~~~~i~~lr~~~~~~~~~i~vGG~~~~~~~~~~~ 183 (201)
T cd02070 144 TTTMGGMKEVIEALKEAGLRDKVKVMVGGAPVNQEFADEI 183 (201)
T ss_pred cccHHHHHHHHHHHHHCCCCcCCeEEEECCcCCHHHHHHc
No 219
>PLN02614 long-chain acyl-CoA synthetase
Probab=38.56 E-value=3.7e+02 Score=29.20 Aligned_cols=85 Identities=15% Similarity=-0.055 Sum_probs=63.2
Q ss_pred eeecHHHHHHHHHhcc---cccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEec-CCCHHHHHHHHHHhCCcEEE
Q 008636 207 VVQCYKAFFIIAVDSL---IDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLR-KFDAPTVFALIRKHGVTHMC 282 (558)
Q Consensus 207 v~~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 282 (558)
..+|++.+........ ...++.++|++...++.... .+...++++..|+..+.+. ...++++...+++.++.+++
T Consensus 78 ~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e-~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi 156 (666)
T PLN02614 78 VWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPE-WIISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVF 156 (666)
T ss_pred EEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEE
Confidence 3468888765544333 34578899999988886532 2355778888899988876 46789999999999999999
Q ss_pred ehHHHHHHHh
Q 008636 283 GAPIVLNLLS 292 (558)
Q Consensus 283 ~~p~~l~~l~ 292 (558)
.....+..+.
T Consensus 157 ~~~~~~~~~~ 166 (666)
T PLN02614 157 VEEKKISELF 166 (666)
T ss_pred ECHHHHHHHH
Confidence 9877665553
No 220
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=38.55 E-value=1.5e+02 Score=31.07 Aligned_cols=84 Identities=10% Similarity=-0.069 Sum_probs=62.0
Q ss_pred eecHHHHHHHHHhccc---cc-ccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEecC-CCHHHHHHHHHHhCCcEEE
Q 008636 208 VQCYKAFFIIAVDSLI---DW-VVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRK-FDAPTVFALIRKHGVTHMC 282 (558)
Q Consensus 208 ~~t~~~~~~~~~~~~~---~~-~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~-~~~~~~~~~i~~~~~t~l~ 282 (558)
.+|+..+......... .. ++.+++++....+... ..+..+++++..|+..+.++. ..+.++...+++.+++.++
T Consensus 35 ~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 113 (546)
T PRK08314 35 AISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSP-QFVIAYYAILRANAVVVPVNPMNREEELAHYVTDSGARVAI 113 (546)
T ss_pred eecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCh-HHHHHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEEE
Confidence 4788887554443333 33 7888999988887543 344667888889999988764 5788999999999999999
Q ss_pred ehHHHHHHHh
Q 008636 283 GAPIVLNLLS 292 (558)
Q Consensus 283 ~~p~~l~~l~ 292 (558)
..+.....+.
T Consensus 114 ~~~~~~~~~~ 123 (546)
T PRK08314 114 VGSELAPKVA 123 (546)
T ss_pred EccchhhhHH
Confidence 8877665553
No 221
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=38.02 E-value=2.2e+02 Score=30.44 Aligned_cols=101 Identities=15% Similarity=0.103 Sum_probs=69.8
Q ss_pred hcCCCCceEEE---------CCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHH-HHHhhcCcEEEec
Q 008636 25 TACDDCPSIIY---------NDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELH-FAVPMSGAIFNTI 94 (558)
Q Consensus 25 ~~~p~~~a~~~---------~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~-lA~~~~G~~~v~l 94 (558)
...||.+|.+. ++.-+||+.+...+..+...+. -++++|+++-++|-.-=+=-++ +++...|.+.+..
T Consensus 187 ~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~--~~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~~~ 264 (613)
T COG1022 187 PPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLP--PIGPGDRVLSFLPLAHIFERAFEGGLALYGGVTVLF 264 (613)
T ss_pred CCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCC--CCCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEEEe
Confidence 35678888554 1246999999999988887776 3789999999999764333332 4555555444433
Q ss_pred cccCChHHHHHHHhhcCccEEEEeCcChHHHHHHh
Q 008636 95 NTRLDARTISIILKHSESKLVFVDHLSSSLLLEVV 129 (558)
Q Consensus 95 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~ 129 (558)
..+...+..-+...+|.+++.-+-....+....
T Consensus 265 --~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I 297 (613)
T COG1022 265 --KEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGI 297 (613)
T ss_pred --cCCHHHHHHHHHHhCCeEEeechHHHHHHHHHH
Confidence 345677888899999999998766555554443
No 222
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=38.02 E-value=70 Score=24.58 Aligned_cols=52 Identities=4% Similarity=-0.237 Sum_probs=37.9
Q ss_pred cccHHHHHHH----HHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcE
Q 008636 39 TYTWSQTYRR----CLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAI 90 (558)
Q Consensus 39 ~~Ty~~l~~~----v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (558)
.+.+.++.+. ...+...+...++.+++.|.++|.++.....+...+..+|..
T Consensus 37 ~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 92 (106)
T cd01519 37 NIPLSSLPDALALSEEEFEKKYGFPKPSKDKELIFYCKAGVRSKAAAELARSLGYE 92 (106)
T ss_pred EechHHhhhhhCCCHHHHHHHhcccCCCCCCeEEEECCCcHHHHHHHHHHHHcCCc
Confidence 4566665433 235666777778888889999999988877777778888864
No 223
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=37.88 E-value=3.2e+02 Score=28.55 Aligned_cols=98 Identities=12% Similarity=0.036 Sum_probs=67.5
Q ss_pred CCCCceEEEC---------CccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHH---HHHHHHhhcCcEEEec
Q 008636 27 CDDCPSIIYN---------DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMY---ELHFAVPMSGAIFNTI 94 (558)
Q Consensus 27 ~p~~~a~~~~---------~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~---~~~lA~~~~G~~~v~l 94 (558)
.++.+|++.. +..+|.+.+...+..... ..++.++|++...+|-...+- ..+++++..|+..+..
T Consensus 180 ~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~---~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~ 256 (536)
T PRK10946 180 PADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVE---ICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLA 256 (536)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHH---hcCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEEC
Confidence 3466666541 246888888876665433 356889999988877654322 2467888889987765
Q ss_pred cccCChHHHHHHHhhcCccEEEEeCcChHHHHHH
Q 008636 95 NTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128 (558)
Q Consensus 95 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~ 128 (558)
+..+.......+++.++.++.........+...
T Consensus 257 -~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~ 289 (536)
T PRK10946 257 -PDPSATLCFPLIEKHQVNVTALVPPAVSLWLQA 289 (536)
T ss_pred -CCCCHHHHHHHHHHhCCcEEEeChHHHHHHHhh
Confidence 445666778889999999998877666555443
No 224
>PRK05857 acyl-CoA synthetase; Validated
Probab=37.51 E-value=2e+02 Score=30.11 Aligned_cols=80 Identities=13% Similarity=-0.009 Sum_probs=59.5
Q ss_pred eeecHHHHHHHHHhccc---ccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEecC-CCHHHHHHHHHHhCCcEEE
Q 008636 207 VVQCYKAFFIIAVDSLI---DWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRK-FDAPTVFALIRKHGVTHMC 282 (558)
Q Consensus 207 v~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~-~~~~~~~~~i~~~~~t~l~ 282 (558)
..+|++.+......... ..++.+++++....+.... .+...++++..|+..+.++. ...+.+...++..++..++
T Consensus 40 ~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e-~~~~~lA~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii 118 (540)
T PRK05857 40 SALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPE-TYLSVLACAKLGAIAVMADGNLPIAAIERFCQITDPAAAL 118 (540)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHH-HHHHHHHHHHcCeEEEecCccCCHHHHHHHHHhcCCceEE
Confidence 35788888655544443 3467889999888876433 34567888889999998874 6788888999999999988
Q ss_pred ehHHH
Q 008636 283 GAPIV 287 (558)
Q Consensus 283 ~~p~~ 287 (558)
..+..
T Consensus 119 ~~~~~ 123 (540)
T PRK05857 119 VAPGS 123 (540)
T ss_pred Eeccc
Confidence 87754
No 225
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=37.42 E-value=1.7e+02 Score=31.05 Aligned_cols=83 Identities=13% Similarity=0.005 Sum_probs=62.2
Q ss_pred eecHHHHHHHHHhccc---ccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEec-CCCHHHHHHHHHHhCCcEEEe
Q 008636 208 VQCYKAFFIIAVDSLI---DWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLR-KFDAPTVFALIRKHGVTHMCG 283 (558)
Q Consensus 208 ~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 283 (558)
.+|+..+......... ..++..+|++....|.... .+...++++..|+..+.++ ..+.+.+...+++.++..++.
T Consensus 57 ~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 135 (573)
T PRK05605 57 TTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQ-HIVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIV 135 (573)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEe
Confidence 3688887655544433 4467889999988877543 3456788888999988776 467899999999999999998
Q ss_pred hHHHHHHH
Q 008636 284 APIVLNLL 291 (558)
Q Consensus 284 ~p~~l~~l 291 (558)
....+..+
T Consensus 136 ~~~~~~~~ 143 (573)
T PRK05605 136 WDKVAPTV 143 (573)
T ss_pred chhhHHHH
Confidence 77765554
No 226
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=37.36 E-value=1.3e+02 Score=29.88 Aligned_cols=61 Identities=16% Similarity=0.247 Sum_probs=33.0
Q ss_pred HHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEecccc-----CChHHHHHHHhhcCccEEE
Q 008636 52 LASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTR-----LDARTISIILKHSESKLVF 116 (558)
Q Consensus 52 la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii 116 (558)
+...|...++++||.|++-.+. +.....++...|+.++.++.+ .+.+.++..+.. +.++|+
T Consensus 61 l~lal~al~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~ 126 (379)
T PRK11658 61 MHITLMALGIGPGDEVITPSLT---WVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAII 126 (379)
T ss_pred HHHHHHHcCCCCCCEEEECCCc---HHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEE
Confidence 3344445567778877654433 333334555667777766542 245556665543 455554
No 227
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=37.25 E-value=2e+02 Score=29.65 Aligned_cols=83 Identities=11% Similarity=0.059 Sum_probs=60.8
Q ss_pred eecHHHHHHHHHhcc---cccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEecC-CCHHHHHHHHHHhCCcEEEe
Q 008636 208 VQCYKAFFIIAVDSL---IDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRK-FDAPTVFALIRKHGVTHMCG 283 (558)
Q Consensus 208 ~~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~-~~~~~~~~~i~~~~~t~l~~ 283 (558)
.+|+..+........ ...++.+++++....+-.. .....+++++..|+..+.++. .....+...+++.+++.++.
T Consensus 11 ~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~-~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~ 89 (502)
T PRK08276 11 VVTYGELEARSNRLAHGLRALGLREGDVVAILLENNP-EFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIV 89 (502)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCH-HHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEE
Confidence 467777754443333 3456788999998877653 234567888899999888764 57788889999999999998
Q ss_pred hHHHHHHH
Q 008636 284 APIVLNLL 291 (558)
Q Consensus 284 ~p~~l~~l 291 (558)
.+.....+
T Consensus 90 ~~~~~~~~ 97 (502)
T PRK08276 90 SAALADTA 97 (502)
T ss_pred ccchhhHH
Confidence 87766554
No 228
>PLN02550 threonine dehydratase
Probab=37.23 E-value=4.8e+02 Score=27.81 Aligned_cols=92 Identities=8% Similarity=-0.047 Sum_probs=56.7
Q ss_pred CCCCceEEECCccc--cHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHH
Q 008636 27 CDDCPSIIYNDTTY--TWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTIS 104 (558)
Q Consensus 27 ~p~~~a~~~~~~~~--Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~ 104 (558)
...++.+-.++.+- +|++ +-...++.. |.+...++| .+.+..+=....+.++|.++|+.+..+=|...+....
T Consensus 122 ~g~~IylK~E~lqptGSFK~-RGA~n~I~~-L~~e~~~~G---VV~aSaGNhAqgvA~aA~~lGika~IvmP~~tp~~Kv 196 (591)
T PLN02550 122 LGVKVLLKREDLQPVFSFKL-RGAYNMMAK-LPKEQLDKG---VICSSAGNHAQGVALSAQRLGCDAVIAMPVTTPEIKW 196 (591)
T ss_pred hCCEEEEEEcCCCCCCcHHH-HHHHHHHHH-HHHhcCCCC---EEEECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHH
Confidence 33455555555433 4544 222222322 322234455 3445666677777888999998888777776666667
Q ss_pred HHHhhcCccEEEEeCcChH
Q 008636 105 IILKHSESKLVFVDHLSSS 123 (558)
Q Consensus 105 ~~l~~~~~~~ii~~~~~~~ 123 (558)
..++..+++++++.+....
T Consensus 197 ~~~r~~GAeVvl~g~~~de 215 (591)
T PLN02550 197 QSVERLGATVVLVGDSYDE 215 (591)
T ss_pred HHHHHcCCEEEEeCCCHHH
Confidence 7789999999999765443
No 229
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=37.01 E-value=2.2e+02 Score=30.39 Aligned_cols=81 Identities=9% Similarity=-0.010 Sum_probs=57.2
Q ss_pred ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchh--HHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEE
Q 008636 38 TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPA--MYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLV 115 (558)
Q Consensus 38 ~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (558)
..+|.+.+...+..+... .++.++|++...+|-... ++..+++.+..|+..+. .+..+...+...+++.++.++
T Consensus 217 V~~sh~~l~~~~~~~~~~---~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~-~~~~~~~~~~~~i~~~~~t~~ 292 (600)
T PRK08279 217 AVMSHMRWLKAMGGFGGL---LRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATLAL-RRKFSASRFWDDVRRYRATAF 292 (600)
T ss_pred EEEeHHHHHHHHHHHHHh---cCCCCCcEEEEecCchhhhhHHHHHHHHHhcCcEEEE-cCCCCHHHHHHHHHHhcceEE
Confidence 468998888777665544 568899999888876543 33445566667777665 456677778888899999988
Q ss_pred EEeCcCh
Q 008636 116 FVDHLSS 122 (558)
Q Consensus 116 i~~~~~~ 122 (558)
.......
T Consensus 293 ~~~p~l~ 299 (600)
T PRK08279 293 QYIGELC 299 (600)
T ss_pred eehHHHH
Confidence 7654433
No 230
>PF09153 DUF1938: Domain of unknown function (DUF1938); InterPro: IPR015236 This domain, which is predominantly found in the archaeal protein O6-alkylguanine-DNA alkyltransferase, adopts a secondary structure consisting of a three stranded antiparallel beta-sheet and three alpha helices. The exact function has not, as yet, been defined, though it has been postulated that this domain may confer thermostability to the protein []. ; GO: 0005737 cytoplasm; PDB: 1MGT_A.
Probab=36.96 E-value=82 Score=23.12 Aligned_cols=32 Identities=19% Similarity=0.330 Sum_probs=23.4
Q ss_pred ceEEECCc------cccHHHHHH-HHHHHHHHHHhCCCC
Q 008636 31 PSIIYNDT------TYTWSQTYR-RCLQLASSLSSFGIN 62 (558)
Q Consensus 31 ~a~~~~~~------~~Ty~~l~~-~v~~la~~L~~~Gv~ 62 (558)
+|+++.++ +++-.|+.+ ++.+++..|.++|++
T Consensus 16 I~vi~e~kIqGItfslDg~efl~eri~~L~~~L~kRgv~ 54 (86)
T PF09153_consen 16 IAVIFEEKIQGITFSLDGEEFLRERISRLIEFLKKRGVS 54 (86)
T ss_dssp EEEEESSSEEEEEEESSHHHHHH-HHHHHHHHHHHTT--
T ss_pred EEEEEcCceeeEEEEeccHHHHHHHHHHHHHHHHhcCce
Confidence 46666652 455678887 999999999998763
No 231
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=36.93 E-value=1.6e+02 Score=30.03 Aligned_cols=51 Identities=14% Similarity=0.086 Sum_probs=22.4
Q ss_pred EEcCCchhHHH-HHHHHhhcCcEEEeccccCC--hHHHHHHHhhcCccEEEEeC
Q 008636 69 VIAPNIPAMYE-LHFAVPMSGAIFNTINTRLD--ARTISIILKHSESKLVFVDH 119 (558)
Q Consensus 69 i~~~~~~~~~~-~~lA~~~~G~~~v~l~~~~~--~~~l~~~l~~~~~~~ii~~~ 119 (558)
+..+++...+. +++++++.|--++...+.+. ..-+...+...+.++.+++.
T Consensus 80 v~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~ 133 (432)
T PRK06702 80 VATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP 133 (432)
T ss_pred EEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC
Confidence 33444444433 33345555544444333332 12223334555666655544
No 232
>PRK13388 acyl-CoA synthetase; Provisional
Probab=36.79 E-value=3e+02 Score=28.89 Aligned_cols=83 Identities=14% Similarity=-0.011 Sum_probs=60.4
Q ss_pred eecHHHHHHHHHhccc---cccc-CCCCEEEEecCchhhhhhhHHHHHHHhcceEEEecC-CCHHHHHHHHHHhCCcEEE
Q 008636 208 VQCYKAFFIIAVDSLI---DWVV-PKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRK-FDAPTVFALIRKHGVTHMC 282 (558)
Q Consensus 208 ~~t~~~~~~~~~~~~~---~~~~-~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~-~~~~~~~~~i~~~~~t~l~ 282 (558)
.+|+..+......... ..+. .+++++...++.... .....++++..|+..+.+++ ...+++...+++.++..++
T Consensus 26 ~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~-~v~~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i 104 (540)
T PRK13388 26 TWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPE-MLFWLAAAALGGYVLVGLNTTRRGAALAADIRRADCQLLV 104 (540)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcH-HHHHHHHHHhCCCEEEEecccCChHHHHHHHHhcCCCEEE
Confidence 5788888655544443 3356 678888888876443 23467788889999988764 5778899999999999999
Q ss_pred ehHHHHHHH
Q 008636 283 GAPIVLNLL 291 (558)
Q Consensus 283 ~~p~~l~~l 291 (558)
........+
T Consensus 105 ~~~~~~~~~ 113 (540)
T PRK13388 105 TDAEHRPLL 113 (540)
T ss_pred EChhhhHHH
Confidence 877665544
No 233
>COG5012 Predicted cobalamin binding protein [General function prediction only]
Probab=36.72 E-value=2.4e+02 Score=25.41 Aligned_cols=82 Identities=10% Similarity=0.081 Sum_probs=51.8
Q ss_pred hhhhhhhHHHHHHHh-cceEEEe-cCCCHHHHHHHHHHhCCcEEEehHHHH------HHHhcCccccCCCCceEEEEecC
Q 008636 240 FHNNGWSFTWGAAVV-GATNVCL-RKFDAPTVFALIRKHGVTHMCGAPIVL------NLLSSSPEAKQLDRPVRILTAGS 311 (558)
Q Consensus 240 ~~~~g~~~~~~~l~~-g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~~p~~l------~~l~~~~~~~~~~~l~~v~~~g~ 311 (558)
.|..|-..+...+-. |--++=+ ....++.++...++++++.+.++-.+- +.+.+..+...++..-.+.+||.
T Consensus 116 vHdIGk~iV~~ml~~aGfevidLG~dvP~e~fve~a~e~k~d~v~~SalMTttm~~~~~viE~L~eeGiRd~v~v~vGGA 195 (227)
T COG5012 116 VHDIGKNIVATMLEAAGFEVIDLGRDVPVEEFVEKAKELKPDLVSMSALMTTTMIGMKDVIELLKEEGIRDKVIVMVGGA 195 (227)
T ss_pred HHHHHHHHHHHHHHhCCcEEEecCCCCCHHHHHHHHHHcCCcEEechHHHHHHHHHHHHHHHHHHHcCCccCeEEeecCc
Confidence 466665554444433 3333322 245689999999999999988775422 22333334455555556777999
Q ss_pred CCChhhhHHh
Q 008636 312 PPPAPVLLRT 321 (558)
Q Consensus 312 ~l~~~~~~~~ 321 (558)
+++.+....+
T Consensus 196 pvtq~~a~~i 205 (227)
T COG5012 196 PVTQDWADKI 205 (227)
T ss_pred cccHHHHHHh
Confidence 9998877655
No 234
>PRK13383 acyl-CoA synthetase; Provisional
Probab=36.61 E-value=2e+02 Score=29.95 Aligned_cols=84 Identities=11% Similarity=0.046 Sum_probs=61.5
Q ss_pred eecHHHHHHHHHhccc---ccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEecC-CCHHHHHHHHHHhCCcEEEe
Q 008636 208 VQCYKAFFIIAVDSLI---DWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRK-FDAPTVFALIRKHGVTHMCG 283 (558)
Q Consensus 208 ~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~-~~~~~~~~~i~~~~~t~l~~ 283 (558)
.+|+..+......... ..++.+++++....+..- ......++++..|+..+.++. ...+.+...+++.++..++.
T Consensus 60 ~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~-~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~ 138 (516)
T PRK13383 60 ALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGR-GFVTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVVA 138 (516)
T ss_pred cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCH-HHHHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEE
Confidence 4777777544443333 346788999888887543 233557788889999998774 67899999999999999999
Q ss_pred hHHHHHHHh
Q 008636 284 APIVLNLLS 292 (558)
Q Consensus 284 ~p~~l~~l~ 292 (558)
.+.+.+.+.
T Consensus 139 ~~~~~~~~~ 147 (516)
T PRK13383 139 DNEFAERIA 147 (516)
T ss_pred chhHHHHHH
Confidence 887766543
No 235
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=36.53 E-value=2.4e+02 Score=23.19 Aligned_cols=94 Identities=12% Similarity=0.034 Sum_probs=56.1
Q ss_pred hhhhhhhHHHHHHH-hcceEEEec-CCCHHHHHHHHHHhCCcEEEehHH------HHHHHhcCccccCCCCceEEEEecC
Q 008636 240 FHNNGWSFTWGAAV-VGATNVCLR-KFDAPTVFALIRKHGVTHMCGAPI------VLNLLSSSPEAKQLDRPVRILTAGS 311 (558)
Q Consensus 240 ~~~~g~~~~~~~l~-~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~------~l~~l~~~~~~~~~~~l~~v~~~g~ 311 (558)
.|..|...+...+- .|-.++-.. ..+++++++.+.+++++.+..+.. .+..+.+..+...+... .+++||.
T Consensus 13 ~HdiGk~iv~~~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl~~~-~vivGG~ 91 (134)
T TIGR01501 13 CHAVGNKILDHAFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGLEGI-LLYVGGN 91 (134)
T ss_pred hhhHhHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCCCCC-EEEecCC
Confidence 46666655444444 455555554 367999999999999988765431 23444444344445444 4677776
Q ss_pred C-CChhhhH----HhhhcCCeeeecccCCC
Q 008636 312 P-PPAPVLL----RTESLGFIVSHGYGKTE 336 (558)
Q Consensus 312 ~-l~~~~~~----~~~~~~~~v~~~YG~tE 336 (558)
. ++++..+ ++++.| +-..||+..
T Consensus 92 ~vi~~~d~~~~~~~l~~~G--v~~vF~pgt 119 (134)
T TIGR01501 92 LVVGKQDFPDVEKRFKEMG--FDRVFAPGT 119 (134)
T ss_pred cCcChhhhHHHHHHHHHcC--CCEEECcCC
Confidence 4 4554433 466666 455676554
No 236
>PRK07787 acyl-CoA synthetase; Validated
Probab=36.36 E-value=3.3e+02 Score=27.85 Aligned_cols=95 Identities=15% Similarity=0.064 Sum_probs=64.8
Q ss_pred CCCCceEEEC--C-------ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC--chhHHHHHHHHhhcCcEEEecc
Q 008636 27 CDDCPSIIYN--D-------TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPN--IPAMYELHFAVPMSGAIFNTIN 95 (558)
Q Consensus 27 ~p~~~a~~~~--~-------~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~--~~~~~~~~lA~~~~G~~~v~l~ 95 (558)
.++.+|++.. + -.+|++.+...+..++.. .++.++|++...+|- ..-++..+++.+..|+..+...
T Consensus 126 ~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~ 202 (471)
T PRK07787 126 DPDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALAEA---WQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTG 202 (471)
T ss_pred CCCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHh---cCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecC
Confidence 3566665541 1 357888887766555543 467788887666553 2345667888899999988765
Q ss_pred ccCChHHHHHHHhhcCccEEEEeCcChHHHH
Q 008636 96 TRLDARTISIILKHSESKLVFVDHLSSSLLL 126 (558)
Q Consensus 96 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 126 (558)
..+...+...++ .++.++.+.+.....+.
T Consensus 203 -~~~~~~~~~~i~-~~~t~~~~~P~~~~~l~ 231 (471)
T PRK07787 203 -RPTPEAYAQALS-EGGTLYFGVPTVWSRIA 231 (471)
T ss_pred -CCCHHHHHHHHh-hCceEEEcchHHHHHHH
Confidence 456788888888 89988877665554443
No 237
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=36.27 E-value=3.9e+02 Score=28.07 Aligned_cols=100 Identities=13% Similarity=0.108 Sum_probs=71.3
Q ss_pred CCCCceEEEC---------CccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCc--hhHHHHHHHHhhcCcEEEecc
Q 008636 27 CDDCPSIIYN---------DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNI--PAMYELHFAVPMSGAIFNTIN 95 (558)
Q Consensus 27 ~p~~~a~~~~---------~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~ 95 (558)
.++.+|++.. +..+|++.+...+..+...+... +.+.|++...+|-. .-+...+++.+..|+..+...
T Consensus 169 ~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~-~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~~~ 247 (534)
T COG0318 169 DPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGG-LTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVLLS 247 (534)
T ss_pred CCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhccc-CCCCceEEEecChHHHHHHHHHHHHHHHcCCEEEeCC
Confidence 4677787641 24689999998877666666542 67888877777764 346667788888999988887
Q ss_pred c-cCChHHHHHHHhhcCccEEEEeCcChHHHHH
Q 008636 96 T-RLDARTISIILKHSESKLVFVDHLSSSLLLE 127 (558)
Q Consensus 96 ~-~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~ 127 (558)
+ .++.+.+...+.+.++..+...+.....+..
T Consensus 248 ~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~ 280 (534)
T COG0318 248 PEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLD 280 (534)
T ss_pred CCCcCHHHHHHHHHHhcceEEecchHHHHHHHh
Confidence 6 6888888888888887777665555444333
No 238
>PRK10717 cysteine synthase A; Provisional
Probab=35.90 E-value=2.6e+02 Score=27.19 Aligned_cols=88 Identities=13% Similarity=0.044 Sum_probs=56.1
Q ss_pred CceEEECCcc--ccHHHHHHHHHHHHHHHHhCC-CCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHHHH
Q 008636 30 CPSIIYNDTT--YTWSQTYRRCLQLASSLSSFG-INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISII 106 (558)
Q Consensus 30 ~~a~~~~~~~--~Ty~~l~~~v~~la~~L~~~G-v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 106 (558)
++.+-.+..+ =++++ +-+..+...+.+.| +++|+.|.. +..+-.-..+.++|.+.|..+..+=|...+......
T Consensus 29 ~i~~K~E~~nptGS~K~--Rga~~~v~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~vv~p~~~~~~k~~~ 105 (330)
T PRK10717 29 EILGKAEFLNPGGSVKD--RAALNIIWDAEKRGLLKPGGTIVE-GTAGNTGIGLALVAAARGYKTVIVMPETQSQEKKDL 105 (330)
T ss_pred eEEEEeeccCCCCCchH--HHHHHHHHHHHHcCCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHH
Confidence 4555554433 33332 22223333344455 466776544 556666777777888899887777776666677888
Q ss_pred HhhcCccEEEEeCc
Q 008636 107 LKHSESKLVFVDHL 120 (558)
Q Consensus 107 l~~~~~~~ii~~~~ 120 (558)
++..++++++++..
T Consensus 106 ~~~~GA~V~~~~~~ 119 (330)
T PRK10717 106 LRALGAELVLVPAA 119 (330)
T ss_pred HHHcCCEEEEeCCc
Confidence 99999999998753
No 239
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=35.67 E-value=1.7e+02 Score=29.01 Aligned_cols=65 Identities=15% Similarity=0.184 Sum_probs=39.6
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEecccc-----CChHHHHHHHhh---cCccEEEE
Q 008636 50 LQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTR-----LDARTISIILKH---SESKLVFV 117 (558)
Q Consensus 50 ~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~---~~~~~ii~ 117 (558)
..+...+...++++||.|++-.+. +....-++...|+.++.++.+ .+.+.++..++. -++++++.
T Consensus 55 ~al~~~l~al~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~ 127 (380)
T TIGR03588 55 SALHIACLALGVGPGDRVWTTPIT---FVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVP 127 (380)
T ss_pred HHHHHHHHHcCCCCCCEEEeCCcc---hHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEE
Confidence 334444455577889987776543 334445666778877776542 356677777763 35566653
No 240
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=35.46 E-value=4.9e+02 Score=27.16 Aligned_cols=95 Identities=8% Similarity=0.026 Sum_probs=64.1
Q ss_pred CCCCceEEEC---------CccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCch--hHHHHHHHHhhcCcEEEecc
Q 008636 27 CDDCPSIIYN---------DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIP--AMYELHFAVPMSGAIFNTIN 95 (558)
Q Consensus 27 ~p~~~a~~~~---------~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~ 95 (558)
.++.+|++.. +..+|++.+...+.... ...+++.+|++...+|-.. .++..++..+..|...+..
T Consensus 193 ~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~- 268 (538)
T TIGR03208 193 SPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYA---ERLELGGGDVILMASPMAHQTGFMYGLMMPLILNATAVLQ- 268 (538)
T ss_pred CCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHH---hhcCCCCCCeEEEeCCchhHHHHHHHHHHHHHcCCEEEec-
Confidence 4567776541 13577777765544433 3346788999888887653 2455567777788876654
Q ss_pred ccCChHHHHHHHhhcCccEEEEeCcChHHH
Q 008636 96 TRLDARTISIILKHSESKLVFVDHLSSSLL 125 (558)
Q Consensus 96 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 125 (558)
+..+...+...+++.++.++.........+
T Consensus 269 ~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l 298 (538)
T TIGR03208 269 DIWNPARAAELIRETGVTFTMASTPFLTDL 298 (538)
T ss_pred CccCHHHHHHHHHHhCCeEEecCHHHHHHH
Confidence 466788889999999999987766555444
No 241
>PRK07514 malonyl-CoA synthase; Validated
Probab=35.39 E-value=2.1e+02 Score=29.47 Aligned_cols=84 Identities=11% Similarity=0.051 Sum_probs=61.6
Q ss_pred eeecHHHHHHHHHhc---ccccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEecC-CCHHHHHHHHHHhCCcEEE
Q 008636 207 VVQCYKAFFIIAVDS---LIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRK-FDAPTVFALIRKHGVTHMC 282 (558)
Q Consensus 207 v~~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~-~~~~~~~~~i~~~~~t~l~ 282 (558)
..+|+..+....... ....++.+++++....+... .....+++++..|+..+.+++ ....++...++..+++.++
T Consensus 27 ~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~-e~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii 105 (504)
T PRK07514 27 LRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSP-EALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALVV 105 (504)
T ss_pred CEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEEE
Confidence 357888775444333 33457889999988877653 234567788889999887764 6788899999999999998
Q ss_pred ehHHHHHHH
Q 008636 283 GAPIVLNLL 291 (558)
Q Consensus 283 ~~p~~l~~l 291 (558)
..+.....+
T Consensus 106 ~~~~~~~~~ 114 (504)
T PRK07514 106 CDPANFAWL 114 (504)
T ss_pred EccchhHHH
Confidence 887766544
No 242
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=35.18 E-value=2.4e+02 Score=29.54 Aligned_cols=96 Identities=9% Similarity=-0.029 Sum_probs=65.5
Q ss_pred CCCceEEEccCCCCCCCceeeecHHHHHHHHHhccc---ccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEecC-
Q 008636 188 DLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLI---DWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRK- 263 (558)
Q Consensus 188 ~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~- 263 (558)
++.++++....| ..+|+..+......... ..++.+++++...++-.... ....++++..|+..+.++.
T Consensus 42 p~~~a~~~~~~~-------~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~vpl~~~ 113 (546)
T PLN02330 42 ADKVAFVEAVTG-------KAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEY-GIVALGIMAAGGVFSGANPT 113 (546)
T ss_pred CCccEEEecCCC-------CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHH-HHHHHHHHHhCcEeccCCcc
Confidence 456666532221 35788888655444333 44678899998887664422 3557888889998887764
Q ss_pred CCHHHHHHHHHHhCCcEEEehHHHHHHH
Q 008636 264 FDAPTVFALIRKHGVTHMCGAPIVLNLL 291 (558)
Q Consensus 264 ~~~~~~~~~i~~~~~t~l~~~p~~l~~l 291 (558)
...+++...+++.++..++..+..+..+
T Consensus 114 ~~~~~l~~~l~~~~~~~~i~~~~~~~~~ 141 (546)
T PLN02330 114 ALESEIKKQAEAAGAKLIVTNDTNYGKV 141 (546)
T ss_pred CCHHHHHHHHHhcCCeEEEEccchhhhH
Confidence 5678899999999999998876655443
No 243
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=35.16 E-value=4.7e+02 Score=26.11 Aligned_cols=106 Identities=13% Similarity=0.099 Sum_probs=62.0
Q ss_pred CChhhHHHHHhhcCCCCceEEE-C--------CccccHHHHHHHHHHHHHHHHhCCCC--CCCEEEEEcCCch--hHHHH
Q 008636 14 LTPLGFIERAATACDDCPSIIY-N--------DTTYTWSQTYRRCLQLASSLSSFGIN--PGHVVSVIAPNIP--AMYEL 80 (558)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~-~--------~~~~Ty~~l~~~v~~la~~L~~~Gv~--~gd~V~i~~~~~~--~~~~~ 80 (558)
+++.++++-....+-+..++++ . +-.+|++++...+..++..+ |+. +.|++..++|-.. -+...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~~~dr~l~~~Pl~h~~g~~~~ 156 (386)
T TIGR02372 80 RRIGEWVDLIAHHSTPTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKIL---GERPPPVRRVISCVPAHHLYGFLFS 156 (386)
T ss_pred ccHHHHHHHHHhcCCCCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHh---CcCCCCCCeEEEeCCcHHHHHHHHH
Confidence 4566666655555444455544 2 24689999988887777655 443 3457777777653 23445
Q ss_pred HHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEEEeCcChHHH
Q 008636 81 HFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLL 125 (558)
Q Consensus 81 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 125 (558)
++..+..|+.++... ..+...+-..++.. .+++..+.....+
T Consensus 157 ~l~~l~~G~~vv~~~-~~~~~~~l~~i~~~--t~~~~~P~~l~~l 198 (386)
T TIGR02372 157 CLLPSRRGLEAKQLA-AAPASGIMRHARPG--DLIVGTPFIWEQL 198 (386)
T ss_pred HHHHHHCCCeEEecC-CCChHHHHHhhccC--CEEEECcHHHHHH
Confidence 566677898887765 35554444444322 4666655544443
No 244
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=35.16 E-value=2.3e+02 Score=33.80 Aligned_cols=98 Identities=10% Similarity=0.011 Sum_probs=68.5
Q ss_pred CCCCceEEEC---------CccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhH-HHHHHHHhhcCcEEEeccc
Q 008636 27 CDDCPSIIYN---------DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAM-YELHFAVPMSGAIFNTINT 96 (558)
Q Consensus 27 ~p~~~a~~~~---------~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~~ 96 (558)
.|+.+|++.. +..+|.+.+...+... ....++.++|+++..++-+.+. +.-+++.+..|+..+..++
T Consensus 596 ~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~ 672 (1296)
T PRK10252 596 QPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWM---QNHYPLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEP 672 (1296)
T ss_pred CCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHH---HHhcCCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEECCh
Confidence 4667776541 2458888776554333 2345789999999988887654 3346777888999888765
Q ss_pred c--CChHHHHHHHhhcCccEEEEeCcChHHHHH
Q 008636 97 R--LDARTISIILKHSESKLVFVDHLSSSLLLE 127 (558)
Q Consensus 97 ~--~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~ 127 (558)
. .+...+...+++.++.++...+.....+..
T Consensus 673 ~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~ 705 (1296)
T PRK10252 673 EAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVA 705 (1296)
T ss_pred hccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHh
Confidence 4 357788899999999998877665554443
No 245
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=35.09 E-value=3.3e+02 Score=25.80 Aligned_cols=90 Identities=10% Similarity=0.055 Sum_probs=58.0
Q ss_pred CCceEEECCcccc--HHHHHHHHHHHHHHHHhCCC-CCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHHH
Q 008636 29 DCPSIIYNDTTYT--WSQTYRRCLQLASSLSSFGI-NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISI 105 (558)
Q Consensus 29 ~~~a~~~~~~~~T--y~~l~~~v~~la~~L~~~Gv-~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 105 (558)
-++.+-.+..+-| ++. +.+..+-..+.+.|. ++|+.|. .+..+-.-..+.++|.+.|..+..+=|.........
T Consensus 17 ~~i~~K~E~~~ptgS~K~--R~a~~~l~~a~~~g~~~~~~~vv-~~SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~ 93 (291)
T cd01561 17 AEIYAKLEFFNPGGSVKD--RIALYMIEDAEKRGLLKPGTTII-EPTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRK 93 (291)
T ss_pred CeEEEEecccCCCCcchH--HHHHHHHHHHHHcCCCCCCCEEE-EeCCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHH
Confidence 3556655553333 222 122223334445554 3566654 466677777788888899988887777665566678
Q ss_pred HHhhcCccEEEEeCcC
Q 008636 106 ILKHSESKLVFVDHLS 121 (558)
Q Consensus 106 ~l~~~~~~~ii~~~~~ 121 (558)
.++..++++++++...
T Consensus 94 ~~~~~Ga~v~~~~~~~ 109 (291)
T cd01561 94 LLRALGAEVILTPEAE 109 (291)
T ss_pred HHHHcCCEEEEeCCCC
Confidence 8899999999998764
No 246
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=35.07 E-value=2.6e+02 Score=29.48 Aligned_cols=81 Identities=11% Similarity=0.033 Sum_probs=60.1
Q ss_pred eecHHHHHHHHHhcccc----cccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEecC-CCHHHHHHHHHHhCCcEEE
Q 008636 208 VQCYKAFFIIAVDSLID----WVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRK-FDAPTVFALIRKHGVTHMC 282 (558)
Q Consensus 208 ~~t~~~~~~~~~~~~~~----~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~-~~~~~~~~~i~~~~~t~l~ 282 (558)
.+|+..+.......... .++..++++...++.... ....+++++..|+..+.++. ...+++...+++.++..++
T Consensus 49 ~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~-~~~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~ii 127 (562)
T PRK05677 49 TLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQ-YPVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKALV 127 (562)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceEEE
Confidence 57888886555544432 367889999998877432 23557788889999988764 6788899999999999998
Q ss_pred ehHHHHH
Q 008636 283 GAPIVLN 289 (558)
Q Consensus 283 ~~p~~l~ 289 (558)
.......
T Consensus 128 ~~~~~~~ 134 (562)
T PRK05677 128 CLANMAH 134 (562)
T ss_pred Eecchhh
Confidence 7665544
No 247
>PRK06382 threonine dehydratase; Provisional
Probab=34.83 E-value=2.7e+02 Score=28.12 Aligned_cols=55 Identities=5% Similarity=0.030 Sum_probs=41.4
Q ss_pred EEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEEEeCcChH
Q 008636 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123 (558)
Q Consensus 69 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 123 (558)
+.+..+=....+.++|...|..+..+=|...+......++..+++++++......
T Consensus 77 v~aSsGN~g~a~A~aa~~~G~~~~ivmp~~~~~~k~~~~~~~GA~Vv~~~~~~~~ 131 (406)
T PRK06382 77 ITASAGNHAQGVAYAASINGIDAKIVMPEYTIPQKVNAVEAYGAHVILTGRDYDE 131 (406)
T ss_pred EEECCCHHHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHcCCEEEEECCCHHH
Confidence 4445566666778899999988888777776666677799999999998765433
No 248
>PRK05852 acyl-CoA synthetase; Validated
Probab=34.49 E-value=4.4e+02 Score=27.50 Aligned_cols=87 Identities=15% Similarity=0.127 Sum_probs=60.9
Q ss_pred ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCch--hHHHHHHHHhhcCcEEEec-cccCChHHHHHHHhhcCccE
Q 008636 38 TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIP--AMYELHFAVPMSGAIFNTI-NTRLDARTISIILKHSESKL 114 (558)
Q Consensus 38 ~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l-~~~~~~~~l~~~l~~~~~~~ 114 (558)
-.+|++.+...+..+...+ +++++|++....|... .++..+++++..|...+.- ....+...+...+++.++..
T Consensus 194 v~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~ 270 (534)
T PRK05852 194 VPWTHANIASSVRAIITGY---RLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATW 270 (534)
T ss_pred EEecHHHHHHHHHHHHHHh---CCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcE
Confidence 3578888877666655433 6788998887776543 4555677777777765532 23456778888899999999
Q ss_pred EEEeCcChHHHHH
Q 008636 115 VFVDHLSSSLLLE 127 (558)
Q Consensus 115 ii~~~~~~~~~~~ 127 (558)
++..+.....+..
T Consensus 271 ~~~~P~~~~~l~~ 283 (534)
T PRK05852 271 YTAVPTIHQILLE 283 (534)
T ss_pred EEcChHHHHHHHh
Confidence 9887766655544
No 249
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=34.46 E-value=70 Score=30.28 Aligned_cols=53 Identities=9% Similarity=0.055 Sum_probs=42.8
Q ss_pred cccHHHHHH-----HHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEE
Q 008636 39 TYTWSQTYR-----RCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIF 91 (558)
Q Consensus 39 ~~Ty~~l~~-----~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 91 (558)
.+.|.++.. ....+...|.+.|+.+++.|.++|.++.....+++++..+|..-
T Consensus 201 ~i~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~~ 258 (281)
T PRK11493 201 NVPWTELVREGELKTTDELDAIFFGRGVSFDRPIIASCGSGVTAAVVVLALATLDVPN 258 (281)
T ss_pred CCCHHHhcCCCCcCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCCC
Confidence 467777663 24567777788899999999999999999999999998889753
No 250
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=34.38 E-value=35 Score=24.27 Aligned_cols=21 Identities=19% Similarity=0.366 Sum_probs=13.3
Q ss_pred HHHHHHHHHhCCCCCCCEEEE
Q 008636 49 CLQLASSLSSFGINPGHVVSV 69 (558)
Q Consensus 49 v~~la~~L~~~Gv~~gd~V~i 69 (558)
...+-..|++.|+++||.|-|
T Consensus 42 ~~Gv~~~L~~~G~~~GD~V~I 62 (69)
T PF09269_consen 42 KMGVEKALRKAGAKEGDTVRI 62 (69)
T ss_dssp HTTHHHHHHTTT--TT-EEEE
T ss_pred HCCHHHHHHHcCCCCCCEEEE
Confidence 334557788889999999976
No 251
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=34.14 E-value=1.8e+02 Score=30.55 Aligned_cols=88 Identities=16% Similarity=0.260 Sum_probs=59.2
Q ss_pred ccccHHHHHHHHHHHHHHHH-hCCCCCCCEEEEEcCCchh-HHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEE
Q 008636 38 TTYTWSQTYRRCLQLASSLS-SFGINPGHVVSVIAPNIPA-MYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLV 115 (558)
Q Consensus 38 ~~~Ty~~l~~~v~~la~~L~-~~Gv~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (558)
..+|.+.+.... .+..+. ..++.++|++..+.|-... .....++++..|+..+...+....+.+...+++.++..+
T Consensus 194 v~~s~~~~~~~~--~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~ 271 (539)
T PRK07008 194 ALYSHRSTVLHA--YGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFS 271 (539)
T ss_pred EEEecHHHHHHH--HHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEE
Confidence 356766654322 222232 3577889988877765322 233346778899998877777788899999999999998
Q ss_pred EEeCcChHHHHH
Q 008636 116 FVDHLSSSLLLE 127 (558)
Q Consensus 116 i~~~~~~~~~~~ 127 (558)
.........+.+
T Consensus 272 ~~~P~~~~~l~~ 283 (539)
T PRK07008 272 AGVPTVWLGLLN 283 (539)
T ss_pred EechHHHHHHHh
Confidence 877665554443
No 252
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=34.10 E-value=49 Score=23.50 Aligned_cols=19 Identities=21% Similarity=0.347 Sum_probs=14.6
Q ss_pred HHHHHHhCCCCCCCEEEEE
Q 008636 52 LASSLSSFGINPGHVVSVI 70 (558)
Q Consensus 52 la~~L~~~Gv~~gd~V~i~ 70 (558)
+-..|++.|+++||.|-|.
T Consensus 45 v~~~L~~~G~~~GD~V~Ig 63 (69)
T TIGR03595 45 VEDALRKAGAKDGDTVRIG 63 (69)
T ss_pred HHHHHHHcCCCCCCEEEEc
Confidence 3456677799999999874
No 253
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=33.61 E-value=3.2e+02 Score=28.32 Aligned_cols=83 Identities=10% Similarity=0.010 Sum_probs=60.3
Q ss_pred eecHHHHHHHHHhccc---ccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEec-CCCHHHHHHHHHHhCCcEEEe
Q 008636 208 VQCYKAFFIIAVDSLI---DWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLR-KFDAPTVFALIRKHGVTHMCG 283 (558)
Q Consensus 208 ~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 283 (558)
.+|+..+......... ..++.+++++....+..... ....++++..|+..+.++ ...++.+...+++.++..++.
T Consensus 37 ~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~-~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~ 115 (517)
T PRK08008 37 RYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEF-IFCWFGLAKIGAIMVPINARLLREESAWILQNSQASLLVT 115 (517)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCeEEEEcCcccCHHHHHHHHHhcCceEEEE
Confidence 4677777555444333 35778899999887764422 255678888899888776 467899999999999999998
Q ss_pred hHHHHHHH
Q 008636 284 APIVLNLL 291 (558)
Q Consensus 284 ~p~~l~~l 291 (558)
.+.....+
T Consensus 116 ~~~~~~~~ 123 (517)
T PRK08008 116 SAQFYPMY 123 (517)
T ss_pred ecchhHHH
Confidence 88765443
No 254
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=33.39 E-value=1.5e+02 Score=30.19 Aligned_cols=55 Identities=15% Similarity=0.277 Sum_probs=32.0
Q ss_pred CCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEecccc-----CChHHHHHHHhhcCccEEEEe
Q 008636 60 GINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTR-----LDARTISIILKHSESKLVFVD 118 (558)
Q Consensus 60 Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~ 118 (558)
++++||.|++-.+.. .....++...|+.+++++.+ .+.+.++..+.. +.++|++.
T Consensus 107 ~~~pGd~VIv~~~t~---~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~ 166 (438)
T PRK15407 107 ALKPGDEVITVAAGF---PTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIA 166 (438)
T ss_pred CCCCCCEEEECCCCc---HHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEe
Confidence 678888776654433 33445555678777766543 245556665542 45656553
No 255
>PRK07798 acyl-CoA synthetase; Validated
Probab=33.15 E-value=3.7e+02 Score=27.85 Aligned_cols=84 Identities=10% Similarity=-0.125 Sum_probs=59.5
Q ss_pred eecHHHHHHHHHhcc---cccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEecC-CCHHHHHHHHHHhCCcEEEe
Q 008636 208 VQCYKAFFIIAVDSL---IDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRK-FDAPTVFALIRKHGVTHMCG 283 (558)
Q Consensus 208 ~~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~-~~~~~~~~~i~~~~~t~l~~ 283 (558)
.+|+..+........ ...++..++++....+-.. -.+...++++..|+..+.++. ...+.+...+++.++..++.
T Consensus 28 ~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~-~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~ 106 (533)
T PRK07798 28 RLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRI-EYVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVALVY 106 (533)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEEEE
Confidence 578888754444333 3446788898887765432 223567788888998887764 57888999999999999998
Q ss_pred hHHHHHHHh
Q 008636 284 APIVLNLLS 292 (558)
Q Consensus 284 ~p~~l~~l~ 292 (558)
.......+.
T Consensus 107 ~~~~~~~~~ 115 (533)
T PRK07798 107 EREFAPRVA 115 (533)
T ss_pred chhhHHHHH
Confidence 876655543
No 256
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=33.04 E-value=21 Score=16.96 Aligned_cols=9 Identities=67% Similarity=1.247 Sum_probs=6.6
Q ss_pred cccCCCCCC
Q 008636 331 GYGKTEIAG 339 (558)
Q Consensus 331 ~YG~tE~g~ 339 (558)
+||+|++.+
T Consensus 1 GYGSTqTA~ 9 (16)
T PF00818_consen 1 GYGSTQTAG 9 (16)
T ss_pred CCCcccccC
Confidence 588888754
No 257
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=33.00 E-value=3.5e+02 Score=29.64 Aligned_cols=88 Identities=8% Similarity=-0.057 Sum_probs=64.5
Q ss_pred eeeecHHHHHHHHHhcc---cccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEec-CCCHHHHHHHHHHhCCcEE
Q 008636 206 GVVQCYKAFFIIAVDSL---IDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLR-KFDAPTVFALIRKHGVTHM 281 (558)
Q Consensus 206 ~v~~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l 281 (558)
...+|++.+........ ...++.++|++...++-.. --....++++..|+..+.+. ..+++++...+++.++..+
T Consensus 119 ~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~l 197 (700)
T PTZ00216 119 TRYITYAELWERIVNFGRGLAELGLTKGSNVAIYEETRW-EWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAI 197 (700)
T ss_pred ceEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCH-HHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEE
Confidence 46788888865554443 3457889999988887643 22345777888898877665 5678899999999999999
Q ss_pred EehHHHHHHHhcC
Q 008636 282 CGAPIVLNLLSSS 294 (558)
Q Consensus 282 ~~~p~~l~~l~~~ 294 (558)
+.....+..+...
T Consensus 198 v~~~~~~~~l~~~ 210 (700)
T PTZ00216 198 VCNGKNVPNLLRL 210 (700)
T ss_pred EECHHHHHHHHHh
Confidence 9988776666543
No 258
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=32.94 E-value=79 Score=30.63 Aligned_cols=54 Identities=11% Similarity=0.030 Sum_probs=42.6
Q ss_pred cccHHHHHHH------HHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEE
Q 008636 39 TYTWSQTYRR------CLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFN 92 (558)
Q Consensus 39 ~~Ty~~l~~~------v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (558)
.+.|.++... ...+...+.+.|+.+++.|.++|..+.....+++++-.+|..-+
T Consensus 238 nip~~~~~~~~~~~~~~~el~~~~~~~gi~~~~~iv~yC~sG~~A~~~~~~L~~~G~~~v 297 (320)
T PLN02723 238 CVPFPQMLDSSQTLLPAEELKKRFEQEGISLDSPIVASCGTGVTACILALGLHRLGKTDV 297 (320)
T ss_pred ccCHHHhcCCCCCCCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCCCe
Confidence 4666665432 45677778888999999999999999999889999999996533
No 259
>cd00754 MoaD Ubiquitin domain of MoaD-like proteins. MoaD family. Members of this family are involved in biosynthesis of the molybdenum cofactor (Moco), an essential cofactor of a diverse group of redox enzymes. Moco biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. Moco contains a tricyclic pyranopterin, termed molybdopterin (MPT), that contains the cis-dithiolene group responsible for molybdenum ligation. This dithiolene group is generated by MPT synthase, the second major step in Moco biosynthesis. MPT synthase consists of a large (MoeE) and small (MoaD) subunit. The small subunit is inserted into the lare subunit to form the active site. The small subunit, which is structurally similar to ubiquitin, contains a C-terminal thiocarboxylated glycine residue that serves as a sulfur donor for the synthesis of the MPT dithiolene group.
Probab=32.78 E-value=1.1e+02 Score=22.10 Aligned_cols=46 Identities=15% Similarity=0.116 Sum_probs=31.2
Q ss_pred CCChhhHHHHHhhcCCC-------CceEEECCccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC
Q 008636 13 PLTPLGFIERAATACDD-------CPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPN 73 (558)
Q Consensus 13 ~~tl~~~l~~~a~~~p~-------~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~ 73 (558)
..|+.++++....++|. ..++...++.++ .+.-++.||+|+|+.|-
T Consensus 25 ~~tv~~ll~~l~~~~~~~~~~~~~~~~v~vNg~~v~---------------~~~~l~~gD~v~i~ppv 77 (80)
T cd00754 25 GATVGELLDALEARYPGLLEELLARVRIAVNGEYVR---------------LDTPLKDGDEVAIIPPV 77 (80)
T ss_pred CCcHHHHHHHHHHHCchHHHhhhhcEEEEECCeEcC---------------CCcccCCCCEEEEeCCC
Confidence 57889999888887765 344444555544 22347889999998763
No 260
>PRK10877 protein disulfide isomerase II DsbC; Provisional
Probab=32.76 E-value=3.9e+02 Score=24.43 Aligned_cols=74 Identities=15% Similarity=0.076 Sum_probs=38.9
Q ss_pred CceeEEccCCcEEEecccCCeeeeCce-eech--HHHHHHHhcCCCcceeEEEeeeCCCCCceeEEEEEecCCCCCCCCC
Q 008636 426 GDVGMMHPDGYLEIKDRSKDVIISGGE-NISS--TEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMM 502 (558)
Q Consensus 426 GD~~~~~~~g~l~~~GR~~d~i~~~G~-~v~~--~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 502 (558)
|.+.+.++||.+.+.|..=| ..+. .++. ...+..+..++ .+.++++.++. ....++..+++-
T Consensus 55 ~~i~Y~~~dg~y~i~G~l~d---~~~~~~~~~t~~~~~~~~~~l~--~~~i~~g~~~~----k~~I~vFtDp~C------ 119 (232)
T PRK10877 55 SGVLYITDDGKHIIQGPMYD---VSGTAPVNVTNQLLLKKLNALE--KEMIVYKAPQE----KHVITVFTDITC------ 119 (232)
T ss_pred CeEEEEcCCCCEEEeeeeEe---cCCCCCCChHHHHHHHHHHhhh--hhcEEecCCCC----CEEEEEEECCCC------
Confidence 45788899999999987544 3332 2332 22333444444 34566654432 234445555543
Q ss_pred CCHHHHHHHHHh
Q 008636 503 TTEKDIIQYCRA 514 (558)
Q Consensus 503 ~~~~~l~~~~~~ 514 (558)
.-...+.+.+.+
T Consensus 120 pyCkkl~~~l~~ 131 (232)
T PRK10877 120 GYCHKLHEQMKD 131 (232)
T ss_pred hHHHHHHHHHHH
Confidence 234455555544
No 261
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=32.59 E-value=94 Score=22.67 Aligned_cols=42 Identities=17% Similarity=0.017 Sum_probs=34.5
Q ss_pred HHHHHh-CCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEec
Q 008636 53 ASSLSS-FGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTI 94 (558)
Q Consensus 53 a~~L~~-~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 94 (558)
..+|++ .|+++|+.++.+..+..+.+..+=|++++.-+-+..
T Consensus 3 GsYls~~agi~eGe~lAYLIapPlEa~y~lDaALKAAdV~~~~ 45 (87)
T cd07050 3 GSYLSKTAGIAEGEALAYLIAPPLEAMYGLDAALKAADVELAT 45 (87)
T ss_pred chhhHHhcCCCCCCeeeeeecCcHHHHHHHHHHHHhhceeeEe
Confidence 356776 699999999999999999999999999987554433
No 262
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=32.56 E-value=3.2e+02 Score=29.37 Aligned_cols=95 Identities=13% Similarity=0.060 Sum_probs=65.5
Q ss_pred CCCCceEEEccCCCCCCCceeeecHHHHHHHHHhcc---cccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEec-
Q 008636 187 SDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSL---IDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLR- 262 (558)
Q Consensus 187 ~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~- 262 (558)
.++.++++.. +..+|. .-.+|++.+........ ...+..++|++...+|.... ....+++++..|+..+.+.
T Consensus 66 ~p~~~A~~~~-~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~Gav~v~~~~ 141 (629)
T PRK10524 66 RPEQLALIAV-STETDE--ERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAE-AAFAMLACARIGAIHSVVFG 141 (629)
T ss_pred CCCCeEEEEE-cCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHhCcEEEeeCC
Confidence 3456666543 222222 34578888865444333 34578999999998877432 2356778888999888776
Q ss_pred CCCHHHHHHHHHHhCCcEEEehH
Q 008636 263 KFDAPTVFALIRKHGVTHMCGAP 285 (558)
Q Consensus 263 ~~~~~~~~~~i~~~~~t~l~~~p 285 (558)
.+....+...+++.++..++...
T Consensus 142 ~~~~~~l~~~l~~~~~~~li~~~ 164 (629)
T PRK10524 142 GFASHSLAARIDDAKPVLIVSAD 164 (629)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcc
Confidence 46789999999999999998754
No 263
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=32.28 E-value=4e+02 Score=27.43 Aligned_cols=85 Identities=8% Similarity=-0.001 Sum_probs=60.2
Q ss_pred ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchh-HHHHHHHHhhcCcEEEecccc--CChHHHHHHHhhcCccE
Q 008636 38 TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPA-MYELHFAVPMSGAIFNTINTR--LDARTISIILKHSESKL 114 (558)
Q Consensus 38 ~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~--~~~~~l~~~l~~~~~~~ 114 (558)
..+|++.+...+..+.. ..++..++++....|-+.. .+..+++++..|+..+..++. .+...+...++..++..
T Consensus 159 v~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 235 (502)
T TIGR01734 159 VQISHDNLVSFTNWMLA---DFPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLDKDITNNFKLLFEELPKTGLNV 235 (502)
T ss_pred EEEecHHHHHHHHHHHH---hCCCCCCceEEeecCceechhHHHHHHHHHCCCEEEEcCHHHhcCHHHHHHHHHHcCCeE
Confidence 46888888766554333 3577888888777665433 455677889999999888764 35567788889999998
Q ss_pred EEEeCcChHHH
Q 008636 115 VFVDHLSSSLL 125 (558)
Q Consensus 115 ii~~~~~~~~~ 125 (558)
+...+.....+
T Consensus 236 ~~~~p~~~~~~ 246 (502)
T TIGR01734 236 WVSTPSFVDMC 246 (502)
T ss_pred EEEChhHHHHH
Confidence 88877655443
No 264
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=32.12 E-value=2.9e+02 Score=29.97 Aligned_cols=85 Identities=15% Similarity=-0.070 Sum_probs=63.4
Q ss_pred eeecHHHHHHHHHhcc---cccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEec-CCCHHHHHHHHHHhCCcEEE
Q 008636 207 VVQCYKAFFIIAVDSL---IDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLR-KFDAPTVFALIRKHGVTHMC 282 (558)
Q Consensus 207 v~~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 282 (558)
..+|++.+........ ...++.++|++....+-... .+...++++..|+..+.+. ....+++...+++.++.+++
T Consensus 76 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e-~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~ 154 (660)
T PLN02861 76 VWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPE-WIIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAF 154 (660)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEE
Confidence 3578888865554443 34578899999888876532 2355778888999988776 46788999999999999999
Q ss_pred ehHHHHHHHh
Q 008636 283 GAPIVLNLLS 292 (558)
Q Consensus 283 ~~p~~l~~l~ 292 (558)
.....+..+.
T Consensus 155 ~~~~~~~~~~ 164 (660)
T PLN02861 155 VQESKISSIL 164 (660)
T ss_pred ECHHHHHHHH
Confidence 8777666554
No 265
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=32.08 E-value=73 Score=28.08 Aligned_cols=33 Identities=24% Similarity=0.543 Sum_probs=28.2
Q ss_pred ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEE
Q 008636 38 TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVI 70 (558)
Q Consensus 38 ~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~ 70 (558)
.-+||.++++.+..+|..+.+-|.+|.-.|+|.
T Consensus 5 ~~vSw~~I~~~~~~lA~kI~~s~~~PDvIiaia 37 (192)
T COG2236 5 LYVSWEEIHRLCRALAEKIRASGFKPDVIVAIA 37 (192)
T ss_pred EEecHHHHHHHHHHHHHHHHHcCCCCCEEEEEc
Confidence 468999999999999999999999886655553
No 266
>PRK13391 acyl-CoA synthetase; Provisional
Probab=31.65 E-value=4.2e+02 Score=27.42 Aligned_cols=97 Identities=11% Similarity=0.129 Sum_probs=67.0
Q ss_pred CCCCceEEEccCCCCCCCceeeecHHHHHHHHHhccc---ccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEecC
Q 008636 187 SDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLI---DWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRK 263 (558)
Q Consensus 187 ~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~ 263 (558)
.++.++++...++ -.+|+..+......... ..++.+++++....+-... .+..+++++..|+..+.++.
T Consensus 10 ~p~~~a~~~~~~~-------~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~-~~~~~~a~~~~G~~~~~l~~ 81 (511)
T PRK13391 10 TPDKPAVIMASTG-------EVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLR-YLEVCWAAERSGLYYTCVNS 81 (511)
T ss_pred CCCceEEEecCCC-------CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHhccEEecccc
Confidence 3556666655432 24788887554443333 3467888998887766432 34557788889999988764
Q ss_pred -CCHHHHHHHHHHhCCcEEEehHHHHHHH
Q 008636 264 -FDAPTVFALIRKHGVTHMCGAPIVLNLL 291 (558)
Q Consensus 264 -~~~~~~~~~i~~~~~t~l~~~p~~l~~l 291 (558)
.+...+...+++.++..+...+.....+
T Consensus 82 ~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 110 (511)
T PRK13391 82 HLTPAEAAYIVDDSGARALITSAAKLDVA 110 (511)
T ss_pred ccCHHHHHHHHhccCCcEEEEchhhHHHH
Confidence 5788899999999999998887665443
No 267
>PRK10595 SOS cell division inhibitor; Provisional
Probab=31.60 E-value=2e+02 Score=24.68 Aligned_cols=35 Identities=14% Similarity=0.015 Sum_probs=15.7
Q ss_pred HHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcC
Q 008636 54 SSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSG 88 (558)
Q Consensus 54 ~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G 88 (558)
.+|.+.|+.....+.|...+..+.+.++-=|++.|
T Consensus 71 ~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG 105 (164)
T PRK10595 71 EWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTG 105 (164)
T ss_pred HHHHHcCCCcccEEEEecCCcHHHHHHHHHHHhhC
Confidence 34444455443333333344444444444444444
No 268
>PRK09088 acyl-CoA synthetase; Validated
Probab=31.58 E-value=3.7e+02 Score=27.52 Aligned_cols=78 Identities=15% Similarity=-0.008 Sum_probs=57.2
Q ss_pred eecHHHHHHHHHhccc---ccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEecC-CCHHHHHHHHHHhCCcEEEe
Q 008636 208 VQCYKAFFIIAVDSLI---DWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRK-FDAPTVFALIRKHGVTHMCG 283 (558)
Q Consensus 208 ~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~-~~~~~~~~~i~~~~~t~l~~ 283 (558)
.+|+..+......... ..++..++++....+.... .+...++++..|+..+.++. ..++.+...+++.+++.++.
T Consensus 22 ~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~-~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~ 100 (488)
T PRK09088 22 RWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVW-LVALHFACARVGAIYVPLNWRLSASELDALLQDAEPRLLLG 100 (488)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCeEEEeeCccCCHHHHHHHHHhCCCCEEEE
Confidence 5788888655544333 3467788998888776543 23556788889998888764 57888999999999999987
Q ss_pred hHH
Q 008636 284 API 286 (558)
Q Consensus 284 ~p~ 286 (558)
...
T Consensus 101 ~~~ 103 (488)
T PRK09088 101 DDA 103 (488)
T ss_pred cch
Confidence 653
No 269
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=31.43 E-value=4e+02 Score=27.15 Aligned_cols=70 Identities=10% Similarity=0.003 Sum_probs=45.3
Q ss_pred CCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhc
Q 008636 59 FGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131 (558)
Q Consensus 59 ~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~ 131 (558)
.|+..|++++++..-+..+.-. +......+...+...+.+.....|++.+|.++++.+.....+.+....
T Consensus 138 ~g~~~g~r~a~~~~~~~~ly~~---~~~~~~~~~~~~l~~~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~ 207 (430)
T TIGR02304 138 DGLFAKHRIAFFLRADNNLYQS---VNNRWISLDFFDLLAPFQAHIKRLNQRKPSIIVAPPSVLRALALEVME 207 (430)
T ss_pred cccccCCcEEEEEccChhHHHH---HHhccceeeecCCCcCHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHh
Confidence 4889999999994322222211 223333244455556677888889999999999988776666555443
No 270
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=30.63 E-value=2.4e+02 Score=29.67 Aligned_cols=83 Identities=11% Similarity=0.039 Sum_probs=60.8
Q ss_pred eecHHHHHHHHHhccc----ccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEecC-CCHHHHHHHHHHhCCcEEE
Q 008636 208 VQCYKAFFIIAVDSLI----DWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRK-FDAPTVFALIRKHGVTHMC 282 (558)
Q Consensus 208 ~~t~~~~~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~-~~~~~~~~~i~~~~~t~l~ 282 (558)
.+|+..+......... ..++.+++++....|.... .....++++..|+..+.+++ ....++...+++.+++.++
T Consensus 50 ~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi 128 (560)
T PRK08751 50 TITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQ-YPIATFGVLRAGLTVVNVNPLYTPRELKHQLIDSGASVLV 128 (560)
T ss_pred eeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHH-HHHHHHHHHHhCeEEeccCccCCHHHHHHHHHhcCCeEEE
Confidence 4788887655544443 3578889999888776533 23557888889999997764 6788899999999999999
Q ss_pred ehHHHHHHH
Q 008636 283 GAPIVLNLL 291 (558)
Q Consensus 283 ~~p~~l~~l 291 (558)
........+
T Consensus 129 ~~~~~~~~~ 137 (560)
T PRK08751 129 VIDNFGTTV 137 (560)
T ss_pred EcchhHHHH
Confidence 877655443
No 271
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=30.15 E-value=2.9e+02 Score=33.21 Aligned_cols=98 Identities=9% Similarity=-0.105 Sum_probs=65.5
Q ss_pred CCCCceEEEccCCCCCCCceeeecHHHHHHHHHhccc---ccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEecC
Q 008636 187 SDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLI---DWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRK 263 (558)
Q Consensus 187 ~~~~~~~i~~TSGtTG~pk~v~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~ 263 (558)
.++.++++...+...+......+|++.+......... ..+..+++++...++-... ....+++++..|+..+.+++
T Consensus 249 ~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~-~i~~~lA~l~~G~~~vpldp 327 (1389)
T TIGR03443 249 HPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVD-LVVAVMGVLKAGATFSVIDP 327 (1389)
T ss_pred CCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHH-HHHHHHHHHhhCcEEeccCC
Confidence 4567776653321111112346899988655544443 3478889999888876532 24567889999999988875
Q ss_pred -CCHHHHHHHHHHhCCcEEEehH
Q 008636 264 -FDAPTVFALIRKHGVTHMCGAP 285 (558)
Q Consensus 264 -~~~~~~~~~i~~~~~t~l~~~p 285 (558)
..++++...++..++..++...
T Consensus 328 ~~p~~~~~~~l~~~~~~~li~~~ 350 (1389)
T TIGR03443 328 AYPPARQTIYLSVAKPRALIVIE 350 (1389)
T ss_pred CCcHHHHHHHHHhcCCCEEEEec
Confidence 5677888889999998887643
No 272
>PLN02356 phosphateglycerate kinase
Probab=29.81 E-value=3.5e+02 Score=27.46 Aligned_cols=71 Identities=18% Similarity=0.108 Sum_probs=49.0
Q ss_pred HHHHHHHHHHhCCC-CCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEEEeC
Q 008636 48 RCLQLASSLSSFGI-NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH 119 (558)
Q Consensus 48 ~v~~la~~L~~~Gv-~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 119 (558)
-+..+-..+.+.|. ++|..|. ....+-.-+.+.++|...|..+..+=|...+......++.+++++++++.
T Consensus 87 ~A~~~i~~a~~~g~~~~~g~Vv-eaSSGN~g~alA~~aa~~G~~~~ivvP~~~s~~K~~~ir~~GAeVi~v~~ 158 (423)
T PLN02356 87 VAVKIIEEALESGQLFPGGVVT-EGSAGSTAISLATVAPAYGCKCHVVIPDDVAIEKSQILEALGATVERVRP 158 (423)
T ss_pred HHHHHHHHHHhCCccCCCCEEE-EeCCHHHHHHHHHHHHHcCCcEEEEECCCCcHHHHHHHHHcCCEEEEECC
Confidence 33444444555554 3666554 44455557778888888998887777776666667889999999999853
No 273
>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures. These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....
Probab=29.74 E-value=1.8e+02 Score=19.63 Aligned_cols=46 Identities=20% Similarity=0.205 Sum_probs=29.7
Q ss_pred hHHHHHHHhcCCCcceeEEEeeeCCCCCceeEEEEEecCCCCCCCCCCCHHHHHHHHHh
Q 008636 456 STEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRA 514 (558)
Q Consensus 456 ~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~ 514 (558)
...|++.|.+.|+|..+.+-.... - +.|...+.. .+.+++.+.+++
T Consensus 13 ~~~v~~~l~~~~GV~~v~vd~~~~------~-v~v~~~~~~------~~~~~i~~~i~~ 58 (62)
T PF00403_consen 13 AKKVEKALSKLPGVKSVKVDLETK------T-VTVTYDPDK------TSIEKIIEAIEK 58 (62)
T ss_dssp HHHHHHHHHTSTTEEEEEEETTTT------E-EEEEESTTT------SCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCcEEEEECCCC------E-EEEEEecCC------CCHHHHHHHHHH
Confidence 457999999999998777653221 1 233333332 466888888865
No 274
>PRK08162 acyl-CoA synthetase; Validated
Probab=29.27 E-value=2.4e+02 Score=29.53 Aligned_cols=83 Identities=11% Similarity=0.107 Sum_probs=62.3
Q ss_pred eecHHHHHHHHHhccc---ccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEec-CCCHHHHHHHHHHhCCcEEEe
Q 008636 208 VQCYKAFFIIAVDSLI---DWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLR-KFDAPTVFALIRKHGVTHMCG 283 (558)
Q Consensus 208 ~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 283 (558)
.+|+..+......... ..++..++++....|-... .+...++++..|+..+.++ ..+.+.+...++..+++.++.
T Consensus 43 ~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~-~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~ 121 (545)
T PRK08162 43 RRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPA-MVEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIV 121 (545)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchH-HHHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEEE
Confidence 4788888655544443 3468889999888877542 2355778888899888776 467899999999999999999
Q ss_pred hHHHHHHH
Q 008636 284 APIVLNLL 291 (558)
Q Consensus 284 ~p~~l~~l 291 (558)
.+..+..+
T Consensus 122 ~~~~~~~~ 129 (545)
T PRK08162 122 DTEFAEVA 129 (545)
T ss_pred ccchhhHH
Confidence 88766554
No 275
>PRK13382 acyl-CoA synthetase; Provisional
Probab=28.95 E-value=3.4e+02 Score=28.37 Aligned_cols=82 Identities=11% Similarity=0.041 Sum_probs=59.8
Q ss_pred eecHHHHHHHHHhccc---ccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEecC-CCHHHHHHHHHHhCCcEEEe
Q 008636 208 VQCYKAFFIIAVDSLI---DWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRK-FDAPTVFALIRKHGVTHMCG 283 (558)
Q Consensus 208 ~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~-~~~~~~~~~i~~~~~t~l~~ 283 (558)
.+|+..+......... ..++.+++++....+.... .+...++++..|+..+.++. ....++...+++.+++.++.
T Consensus 68 ~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~ 146 (537)
T PRK13382 68 TLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRG-FVEALLAANRIGADILLLNTSFAGPALAEVVTREGVDTVIY 146 (537)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHH-HHHHHHHHHHcCcEEEecCcccCHHHHHHHHHhcCCCEEEE
Confidence 4778777544443333 4477889999988876443 34567888889999988874 56788999999999999988
Q ss_pred hHHHHHH
Q 008636 284 APIVLNL 290 (558)
Q Consensus 284 ~p~~l~~ 290 (558)
.......
T Consensus 147 ~~~~~~~ 153 (537)
T PRK13382 147 DEEFSAT 153 (537)
T ss_pred chhhHHH
Confidence 7655443
No 276
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=28.92 E-value=6.5e+02 Score=26.88 Aligned_cols=101 Identities=10% Similarity=-0.055 Sum_probs=66.0
Q ss_pred CCCceEEEcc--CCCCCCCceeeecHHHHHHHHHhccccc--ccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEe-c
Q 008636 188 DLDPMVLNYT--WGTTSAPKGVVQCYKAFFIIAVDSLIDW--VVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCL-R 262 (558)
Q Consensus 188 ~~~~~~i~~T--SGtTG~pk~v~~t~~~~~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~-~ 262 (558)
++.++++... .+++|. ...+|+..+..........+ .+.++|++...++.... .+...++++..|+..+.+ +
T Consensus 48 ~~~~a~~~~~~~~~~~g~--~~~~Ty~el~~~~~~lA~~L~~~~~~gd~V~l~~~n~~e-~~~~~lA~~~aG~v~vpl~~ 124 (612)
T PRK12476 48 GDTVAYRYLDHSHSAAGC--AVELTWTQLGVRLRAVGARLQQVAGPGDRVAILAPQGID-YVAGFFAAIKAGTIAVPLFA 124 (612)
T ss_pred CCceEEEEEccCCCCCCc--ceEEeHHHHHHHHHHHHHHHHHhcCCCCEEEEECCCChh-HHHHHHHHHHcCceeEecCC
Confidence 4566665432 112232 33578888765554433322 26788999988887642 345677888899988876 3
Q ss_pred C-CC--HHHHHHHHHHhCCcEEEehHHHHHHH
Q 008636 263 K-FD--APTVFALIRKHGVTHMCGAPIVLNLL 291 (558)
Q Consensus 263 ~-~~--~~~~~~~i~~~~~t~l~~~p~~l~~l 291 (558)
. .. ++++...+++.++..++..+..+..+
T Consensus 125 ~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 156 (612)
T PRK12476 125 PELPGHAERLDTALRDAEPTVVLTTTAAAEAV 156 (612)
T ss_pred CCcchhHHHHHHHHHhCCCCEEEEcHHHHHHH
Confidence 3 22 67888999999999999887665543
No 277
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=28.44 E-value=3.4e+02 Score=27.77 Aligned_cols=89 Identities=12% Similarity=0.017 Sum_probs=58.1
Q ss_pred CceEEECCccccHHHHHHHHHHHHHHHHhCCC-CCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHHHHHh
Q 008636 30 CPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI-NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILK 108 (558)
Q Consensus 30 ~~a~~~~~~~~Ty~~l~~~v~~la~~L~~~Gv-~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~ 108 (558)
++.+-.++.+-|-+-=.+.+..+-..+.+.|. .+|+.| +.+..+=.-..+.++|.+.|..+..+=|...+......++
T Consensus 27 ~i~~K~E~~nptGS~K~R~a~~~l~~a~~~g~~~~g~~v-v~~ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~ 105 (454)
T TIGR01137 27 ELLAKCEFFNPGGSVKDRIALRMIEDAEASGRLKPGDTI-IEPTSGNTGIGLALVAAIKGYKCIIVLPEKMSNEKVDVLK 105 (454)
T ss_pred eEEEEEhhcCCCcchHHHHHHHHHHHHHHcCCCCCCCEE-EEeCCcHHHHHHHHHHHHcCCeEEEEeCCCcCHHHHHHHH
Confidence 56666655333322222233344444445564 677765 4446667777788889999988888777665566777889
Q ss_pred hcCccEEEEeC
Q 008636 109 HSESKLVFVDH 119 (558)
Q Consensus 109 ~~~~~~ii~~~ 119 (558)
..++++++++.
T Consensus 106 ~~GA~v~~~~~ 116 (454)
T TIGR01137 106 ALGAEIVRTPT 116 (454)
T ss_pred HCCCEEEEcCC
Confidence 99999999875
No 278
>PF07994 NAD_binding_5: Myo-inositol-1-phosphate synthase; InterPro: IPR002587 1L-myo-Inositol-1-phosphate synthase (5.5.1.4 from EC) catalyzes the conversion of D-glucose 6-phosphate to 1L-myo-inositol-1-phosphate, the first committed step in the production of all inositol-containing compounds, including phospholipids, either directly or by salvage. The enzyme exists in a cytoplasmic form in a wide range of plants, animals, and fungi. It has also been detected in several bacteria and a chloroplast form is observed in alga and higher plants. Inositol phosphates play an important role in signal transduction. In Saccharomyces cerevisiae (Baker's yeast), the transcriptional regulation of the INO1 gene has been studied in detail [] and its expression is sensitive to the availability of phospholipid precursors as well as growth phase. The regulation of the structural gene encoding 1L-myo-inositol-1-phosphate synthase has also been analyzed at the transcriptional level in the aquatic angiosperm, Spirodela polyrrhiza (Giant duckweed) and the halophyte, Mesembryanthemum crystallinum (Common ice plant) [].; GO: 0004512 inositol-3-phosphate synthase activity, 0006021 inositol biosynthetic process, 0008654 phospholipid biosynthetic process; PDB: 1GR0_A 1P1K_B 1LA2_B 1RM0_B 1P1I_B 1JKF_A 1P1F_A 1P1J_B 1JKI_B 1P1H_A ....
Probab=28.34 E-value=4.8e+02 Score=24.90 Aligned_cols=73 Identities=14% Similarity=0.039 Sum_probs=49.9
Q ss_pred ccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC-ch---------------------------hHHHHHHHHhhcCcEE
Q 008636 40 YTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPN-IP---------------------------AMYELHFAVPMSGAIF 91 (558)
Q Consensus 40 ~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~-~~---------------------------~~~~~~lA~~~~G~~~ 91 (558)
-.+.++.+....+..++++.|+. ..|.|-+-+ .+ -..+..+|+++.|+.+
T Consensus 126 ~~~~~~e~~~~DI~~f~~~~~~d--~vVvvn~asTE~~~~~~~~~~~t~~~l~~al~~~~~~~~aS~~YA~AAl~~g~~f 203 (295)
T PF07994_consen 126 SKREQVEQIREDIRDFKKENGLD--RVVVVNVASTERYIPVIPGVHDTLEALEKALDENDPEISASMLYAYAALEAGVPF 203 (295)
T ss_dssp THHHHHHHHHHHHHHHHHHTT-S--CEEEEE-SSCC-S---CCCCCSSHHHHHHHHHTT-TTHHHHHHHHHHHHHTTEEE
T ss_pred chHHHHHHHHHHHHHHHHHhCCC--cEEEEECCCCCCCCCCCccccCCHHHHHHHhhcCCCcCChHHHHHHHHHHCCCCe
Confidence 34566667778888999998763 455553333 22 2456678889999999
Q ss_pred EeccccCCh--HHHHHHHhhcCccE
Q 008636 92 NTINTRLDA--RTISIILKHSESKL 114 (558)
Q Consensus 92 v~l~~~~~~--~~l~~~l~~~~~~~ 114 (558)
+-..|+... ..+..+.++.+.-+
T Consensus 204 vN~tP~~~a~~P~l~ela~~~gvpi 228 (295)
T PF07994_consen 204 VNGTPSNIADDPALVELAEEKGVPI 228 (295)
T ss_dssp EE-SSSTTTTSHHHHHHHHHHTEEE
T ss_pred EeccCccccCCHHHHHHHHHcCCCe
Confidence 999998866 67888888877653
No 279
>PRK06145 acyl-CoA synthetase; Validated
Probab=28.33 E-value=6.5e+02 Score=25.77 Aligned_cols=96 Identities=9% Similarity=0.128 Sum_probs=63.4
Q ss_pred CCCCceEEEC--C-------ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchh--HHHHHHHHhhcCcEEEecc
Q 008636 27 CDDCPSIIYN--D-------TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPA--MYELHFAVPMSGAIFNTIN 95 (558)
Q Consensus 27 ~p~~~a~~~~--~-------~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~ 95 (558)
.++.+|++.. + ..+|++.+...+. ......++..++++....|-.-. +....++++..|+..+..
T Consensus 147 ~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~- 222 (497)
T PRK06145 147 APTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSI---DHVIALGLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIH- 222 (497)
T ss_pred CccceEEEEeCCCCCCCCcEEEEecHHHHHHHH---HHHHhhCCCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEEC-
Confidence 4566765531 1 4688888865433 33445688999998887765322 223345667778776655
Q ss_pred ccCChHHHHHHHhhcCccEEEEeCcChHHHH
Q 008636 96 TRLDARTISIILKHSESKLVFVDHLSSSLLL 126 (558)
Q Consensus 96 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 126 (558)
+..+...+...+++.++.++...+.....+.
T Consensus 223 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ll 253 (497)
T PRK06145 223 REFDPEAVLAAIERHRLTCAWMAPVMLSRVL 253 (497)
T ss_pred CcCCHHHHHHHHHHhCCeEEEehHHHHHHHH
Confidence 4567888889999999999887665554443
No 280
>PF03744 BioW: 6-carboxyhexanoate--CoA ligase; InterPro: IPR005499 This family contains the enzyme 6-carboxyhexanoate--CoA ligase 6.2.1.14 from EC. This enzyme is involved in the first step of biotin synthesis, where it converts pimelate into pimeloyl-CoA []. The enzyme requires magnesium as a cofactor and forms a homodimer [].; GO: 0009102 biotin biosynthetic process
Probab=28.08 E-value=85 Score=28.63 Aligned_cols=8 Identities=13% Similarity=0.115 Sum_probs=7.2
Q ss_pred eeeEEEEe
Q 008636 392 TRGEIVMR 399 (558)
Q Consensus 392 ~~Gel~v~ 399 (558)
.++|||++
T Consensus 174 iiaELC~S 181 (239)
T PF03744_consen 174 IIAELCWS 181 (239)
T ss_pred ceEEEEec
Confidence 78999998
No 281
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon. The holoenzyme of adenosylcobalamin-dependent ethanolamine ammonia-lyase (EutBC, IPR0092462 from INTERPRO, IPR010628 from INTERPRO), which is part of the ethanolamine utilization pathway [, , ], undergoes suicidal inactivation during catalysis as well as inactivation in the absence of substrate. The inactivation involves the irreversible cleavage of the Co-C bond of the coenzyme. The inactivated holoenzyme undergoes rapid and continuous reactivation in the presence of ATP, Mg2+, and free adenosylcobalamin in permeabilised cells (in situ), homogenate, and cell extracts of Escherichia coli. The EutA protein is essential for reactivation. It was demonstrated with purified recombinant EutA that both the suicidally inactivated and O2-inactivated holoethanolamine ammonia lyase underwent rapid reactivation in vitro by EutA in the presence of adenosylcobalamin, ATP, and Mg2+ []. The inactive enzyme-cyanocobalamin complex was also activated in situ and in vitro by EutA under the same conditions. Thus EutA is believed to be the only component of the reactivating factor for ethanolamine ammonia lyase. Reactivation and activation occur through the exchange of modified coenzyme for free intact adenosylcobalamin []. Bacteria that harbor the ethanolamine utilization pathway can use ethanolamine as a source of carbon and nitrogen. For more information on the ethanolamine utilization pathway, please see IPR009194 from INTERPRO, IPR012408 from INTERPRO.
Probab=27.68 E-value=4.2e+02 Score=27.16 Aligned_cols=68 Identities=13% Similarity=0.055 Sum_probs=50.7
Q ss_pred CChhhHHHHHhhc-----CCCCceEEECC-ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHH
Q 008636 14 LTPLGFIERAATA-----CDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHF 82 (558)
Q Consensus 14 ~tl~~~l~~~a~~-----~p~~~a~~~~~-~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~l 82 (558)
..+.+.+++.... .-+..|+...+ ...+|+++.+.++.++.++.+. ++++..+.|++++..--++-+.
T Consensus 353 ~~l~~~i~~~l~~~~~~~~~~~~Alal~g~~~~~f~~iq~lA~~i~~~~~~~-~~~~~Plivv~e~D~aKvLGq~ 426 (473)
T PF06277_consen 353 EELAEAIREALEWFDLEGEDQPVALALPGKPNPSFAEIQELAEAIAEGMAEL-INPDQPLIVVVEQDMAKVLGQT 426 (473)
T ss_pred HHHHHHHHHHHHhhcccCCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhh-ccCCCCEEEEECchHHHHHHHH
Confidence 4666666666554 23466777765 5899999999999999999986 6677788888888876665443
No 282
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=27.51 E-value=1.1e+02 Score=30.72 Aligned_cols=48 Identities=27% Similarity=0.273 Sum_probs=33.0
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEecccc---------CCh-----HHHHHHHhhcC
Q 008636 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTR---------LDA-----RTISIILKHSE 111 (558)
Q Consensus 61 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~---------~~~-----~~l~~~l~~~~ 111 (558)
+++||.| ++-.|+--.+.. ||...|+.++.++|. .+. +.++..+++..
T Consensus 103 ~~~gd~V-Lv~RN~HkSv~~--alil~ga~Pvyi~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p 164 (417)
T PF01276_consen 103 CRPGDKV-LVDRNCHKSVYN--ALILSGAIPVYIPPEDNEYGIIGGISPDEFNEEDIEEALKEHP 164 (417)
T ss_dssp TTTTCEE-EEETT--HHHHH--HHHHHTEEEEEEEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCT
T ss_pred cCCCCEE-EEcCCcHHHHHH--HHHHcCCeEEEecCCccccCCccCCChhhhhHHHHHHHHHhCc
Confidence 4789975 455666555554 999999999999884 233 67777787654
No 283
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=27.37 E-value=5.2e+02 Score=27.03 Aligned_cols=76 Identities=12% Similarity=0.001 Sum_probs=54.1
Q ss_pred cccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchh--HHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEE
Q 008636 39 TYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPA--MYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVF 116 (558)
Q Consensus 39 ~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (558)
.+|++.+...+.. .....++.++|++...+|-... ++..+++.+..|+..+... ..+...+...+++.++.+++
T Consensus 206 ~~t~~~l~~~~~~---~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 281 (547)
T PRK06087 206 MLTHNNILASERA---YCARLNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSVLLD-IFTPDACLALLEQQRCTCML 281 (547)
T ss_pred EEecHHHHHHHHH---HHHhcCCCCCCeEEEecchHHHHHHHHHHHHHHhcCCEEEecC-CCCHHHHHHHHHHcCCCEEe
Confidence 4788877655443 3334578899998887765433 4456777788898888765 45677788889999999887
Q ss_pred Ee
Q 008636 117 VD 118 (558)
Q Consensus 117 ~~ 118 (558)
..
T Consensus 282 ~~ 283 (547)
T PRK06087 282 GA 283 (547)
T ss_pred cc
Confidence 64
No 284
>PRK06178 acyl-CoA synthetase; Validated
Probab=27.30 E-value=3.2e+02 Score=28.80 Aligned_cols=84 Identities=13% Similarity=0.067 Sum_probs=62.4
Q ss_pred eecHHHHHHHHHhccc---ccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEecC-CCHHHHHHHHHHhCCcEEEe
Q 008636 208 VQCYKAFFIIAVDSLI---DWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRK-FDAPTVFALIRKHGVTHMCG 283 (558)
Q Consensus 208 ~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~-~~~~~~~~~i~~~~~t~l~~ 283 (558)
.+|+..+......... ..++.+++++....+.... .....++++..|+..+.+++ .....+...+++.++..++.
T Consensus 58 ~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~ 136 (567)
T PRK06178 58 VITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQ-FHIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLA 136 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcH-HHHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEE
Confidence 4788887655444333 3467888998888776543 34567888889998887764 57888999999999999999
Q ss_pred hHHHHHHHh
Q 008636 284 APIVLNLLS 292 (558)
Q Consensus 284 ~p~~l~~l~ 292 (558)
.+..+..+.
T Consensus 137 ~~~~~~~l~ 145 (567)
T PRK06178 137 LDQLAPVVE 145 (567)
T ss_pred ccchHHHHH
Confidence 888776554
No 285
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=27.19 E-value=4.6e+02 Score=30.71 Aligned_cols=95 Identities=15% Similarity=0.116 Sum_probs=64.6
Q ss_pred CCCCceEEEC---------CccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCch--hHHHHHHHHhhcCcEEEecc
Q 008636 27 CDDCPSIIYN---------DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIP--AMYELHFAVPMSGAIFNTIN 95 (558)
Q Consensus 27 ~p~~~a~~~~---------~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~ 95 (558)
.++.+|++.. +-.+|.+++...+...+. ..+++++|++...+|-.. .+...++..+..|+..+..+
T Consensus 791 ~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~ 867 (1140)
T PRK06814 791 DPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAA---RIDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFLYP 867 (1140)
T ss_pred CCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHH---hhCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEEec
Confidence 4567776541 135888888766665554 346788999988877532 33355667777898888776
Q ss_pred ccCChHHHHHHHhhcCccEEEEeCcChHH
Q 008636 96 TRLDARTISIILKHSESKLVFVDHLSSSL 124 (558)
Q Consensus 96 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 124 (558)
.....+.+.+.+++.++.++...+.....
T Consensus 868 ~~~~~~~~~~~i~~~~~t~~~~~p~~l~~ 896 (1140)
T PRK06814 868 SPLHYRIIPELIYDTNATILFGTDTFLNG 896 (1140)
T ss_pred CcccHHHHHHHHHhcCCEEEEecHHHHHH
Confidence 55555667788899999988876544433
No 286
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=27.08 E-value=3.2e+02 Score=28.74 Aligned_cols=83 Identities=7% Similarity=-0.038 Sum_probs=60.6
Q ss_pred eeecHHHHHHHHHhccc---ccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEecC-CCHHHHHHHHHHhCCcEEE
Q 008636 207 VVQCYKAFFIIAVDSLI---DWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRK-FDAPTVFALIRKHGVTHMC 282 (558)
Q Consensus 207 v~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~-~~~~~~~~~i~~~~~t~l~ 282 (558)
..+|+..+......... ..++.+++++....+-... .....++++..|+..+.+++ ....++...+++.+++.++
T Consensus 47 ~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~-~~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi 125 (557)
T PRK07059 47 KAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQ-YPVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIV 125 (557)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHH-HHHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEEE
Confidence 35788888655544443 3467889999888776432 23456888889999987764 5688899999999999998
Q ss_pred ehHHHHHH
Q 008636 283 GAPIVLNL 290 (558)
Q Consensus 283 ~~p~~l~~ 290 (558)
....+...
T Consensus 126 ~~~~~~~~ 133 (557)
T PRK07059 126 VLENFATT 133 (557)
T ss_pred EchhhHHH
Confidence 87765443
No 287
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=26.70 E-value=2.9e+02 Score=28.59 Aligned_cols=83 Identities=12% Similarity=0.091 Sum_probs=60.0
Q ss_pred eecHHHHHHHHHhcc---cccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEecC-CCHHHHHHHHHHhCCcEEEe
Q 008636 208 VQCYKAFFIIAVDSL---IDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRK-FDAPTVFALIRKHGVTHMCG 283 (558)
Q Consensus 208 ~~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~-~~~~~~~~~i~~~~~t~l~~ 283 (558)
.+|+..+........ ...++.+++++....|-... .....++++..|+..+.++. .....+...+++.+++.++.
T Consensus 11 ~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i~~ 89 (509)
T PRK12406 11 RRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFA-FFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVLIA 89 (509)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEEEE
Confidence 467777754443333 34567889999888776432 23567788888999888764 57888999999999999998
Q ss_pred hHHHHHHH
Q 008636 284 APIVLNLL 291 (558)
Q Consensus 284 ~p~~l~~l 291 (558)
.....+.+
T Consensus 90 ~~~~~~~~ 97 (509)
T PRK12406 90 HADLLHGL 97 (509)
T ss_pred ccchhhhh
Confidence 87666654
No 288
>TIGR02898 spore_YhcN_YlaJ sporulation lipoprotein, YhcN/YlaJ family. YhcN and YlaJ are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic 40-residue C-terminal domain that is not included in the seed alignment for this model. A portion of the low-complexity region between the lipoprotein signal sequence and the main conserved region of the protein family was also excised from the seed alignment.
Probab=26.38 E-value=1.7e+02 Score=24.90 Aligned_cols=25 Identities=28% Similarity=0.123 Sum_probs=20.3
Q ss_pred hHHHHHHHhcCCCcceeEEEeeeCC
Q 008636 456 STEIESVLYSHPMVNEAAVVGRPDP 480 (558)
Q Consensus 456 ~~~iE~~l~~~~~v~~~~v~~~~~~ 480 (558)
...|.+.+.+.|+|.++.++...+.
T Consensus 56 A~~Ia~~v~~v~~V~dA~vvVtg~~ 80 (158)
T TIGR02898 56 ADEIASEAAKVKGVKDATVVITGNY 80 (158)
T ss_pred HHHHHHHHhcCCCCceEEEEEECCE
Confidence 3567888889999999999977544
No 289
>PLN02479 acetate-CoA ligase
Probab=26.24 E-value=3.5e+02 Score=28.56 Aligned_cols=81 Identities=12% Similarity=0.143 Sum_probs=60.3
Q ss_pred eecHHHHHHHHHhccc---ccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEecC-CCHHHHHHHHHHhCCcEEEe
Q 008636 208 VQCYKAFFIIAVDSLI---DWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRK-FDAPTVFALIRKHGVTHMCG 283 (558)
Q Consensus 208 ~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~-~~~~~~~~~i~~~~~t~l~~ 283 (558)
.+|+..+......... ..++.++|++....+... ......++++..|+..+.++. ...+.+...+++.++..++.
T Consensus 45 ~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~-~~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~ 123 (567)
T PLN02479 45 RYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIP-AMYEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMV 123 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcH-HHHHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEEEE
Confidence 4688887655544433 347889999998888643 223557788888998888764 67889999999999999998
Q ss_pred hHHHHH
Q 008636 284 APIVLN 289 (558)
Q Consensus 284 ~p~~l~ 289 (558)
.+..+.
T Consensus 124 ~~~~~~ 129 (567)
T PLN02479 124 DQEFFT 129 (567)
T ss_pred chhhhh
Confidence 876554
No 290
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=26.14 E-value=1.8e+02 Score=25.37 Aligned_cols=47 Identities=4% Similarity=-0.019 Sum_probs=33.0
Q ss_pred CccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHH
Q 008636 37 DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAV 84 (558)
Q Consensus 37 ~~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~ 84 (558)
+.-+||.|+.+.+.++|..+.+. ++....+.|...++-..++..+|-
T Consensus 14 ~~~~s~~~i~~~i~~la~~i~~~-~~~~~~viV~i~~gg~~~A~~La~ 60 (181)
T PRK09162 14 DCLVSAAEVEAAIDRMADEITAD-LADENPLVLCVMGGGLVFTGQLLP 60 (181)
T ss_pred cEeecHHHHHHHHHHHHHHHHHH-cCCCCeEEEEECCCcHHHHHHHHH
Confidence 45789999999999999999984 222233556566666666566553
No 291
>TIGR01127 ilvA_1Cterm threonine dehydratase, medium form. A form of threonine dehydratase with two copies of the C-terminal domain Pfam:PF00585 is described by TIGR01124. This model describes a phylogenetically distinct form with a single copy of pfam00585. This form branches with the catabolic threonine dehydratase of E. coli; many members are designated as catabolic for this reason. However, the catabolic form lacks any pfam00585 domain. Many members of this model are found in species with other Ile biosynthetic enzymes.
Probab=26.10 E-value=4.2e+02 Score=26.34 Aligned_cols=91 Identities=11% Similarity=-0.021 Sum_probs=56.7
Q ss_pred CCCceEEECCc--cccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHHH
Q 008636 28 DDCPSIIYNDT--TYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISI 105 (558)
Q Consensus 28 p~~~a~~~~~~--~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 105 (558)
..++.+-.+.. +=||++ +-+......+.+.|... -.+.+..+=....+.++|.+.|..+..+=|...+.....
T Consensus 14 g~~i~~K~E~~~ptgS~K~--R~a~~~i~~~~~~~~~~---~vv~aSsGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~ 88 (380)
T TIGR01127 14 GSEVYLKLENLQKTGSFKI--RGALNKIANLSEDQRQR---GVVAASAGNHAQGVAYAAKKFGIKAVIVMPESAPPSKVK 88 (380)
T ss_pred CCeEEEEecCCCCCCCcHH--HHHHHHHHhcchhccCC---EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCcHHHHH
Confidence 34566666553 344443 22222222233333322 244555566777778889999988887777777667778
Q ss_pred HHhhcCccEEEEeCcChH
Q 008636 106 ILKHSESKLVFVDHLSSS 123 (558)
Q Consensus 106 ~l~~~~~~~ii~~~~~~~ 123 (558)
.++..+++++++......
T Consensus 89 ~~~~~GA~V~~~~~~~~~ 106 (380)
T TIGR01127 89 ATKSYGAEVILHGDDYDE 106 (380)
T ss_pred HHHHCCCEEEEECCCHHH
Confidence 899999999998764333
No 292
>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.
Probab=25.69 E-value=1.7e+02 Score=23.18 Aligned_cols=41 Identities=20% Similarity=0.130 Sum_probs=31.1
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCC-chhHHHHHHHHhhcCcE
Q 008636 50 LQLASSLSSFGINPGHVVSVIAPN-IPAMYELHFAVPMSGAI 90 (558)
Q Consensus 50 ~~la~~L~~~Gv~~gd~V~i~~~~-~~~~~~~~lA~~~~G~~ 90 (558)
..+...+.+.|+.++..|.+++.. +.....+.+.+...|..
T Consensus 65 ~~~~~~~~~~~~~~~~~vv~~c~~g~~~a~~~~~~l~~~G~~ 106 (122)
T cd01448 65 EEFAELLGSLGISNDDTVVVYDDGGGFFAARAWWTLRYFGHE 106 (122)
T ss_pred HHHHHHHHHcCCCCCCEEEEECCCCCccHHHHHHHHHHcCCC
Confidence 455666777888899999999988 47776667777777854
No 293
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=25.66 E-value=1.8e+02 Score=29.85 Aligned_cols=57 Identities=19% Similarity=0.205 Sum_probs=34.2
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccc-cCChHHHHHHHhhcCccEEEEeC
Q 008636 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINT-RLDARTISIILKHSESKLVFVDH 119 (558)
Q Consensus 62 ~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~-~~~~~~l~~~l~~~~~~~ii~~~ 119 (558)
++||.|++=.| +...+...+-...+..+.+|++. ....+.++..++..+++++++.+
T Consensus 177 ~pGd~v~vE~P-tY~~~~~~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P 234 (459)
T COG1167 177 DPGDTVLVEDP-TYPGALQALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTP 234 (459)
T ss_pred CCCCEEEEcCC-CcHHHHHHHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECC
Confidence 46776665444 44444444444444455555543 44677788888877888887754
No 294
>PRK05939 hypothetical protein; Provisional
Probab=25.38 E-value=2.8e+02 Score=27.82 Aligned_cols=37 Identities=11% Similarity=0.103 Sum_probs=16.2
Q ss_pred HHhhcCcEEEeccccCCh-HHHHHHHhhcCccEEEEeC
Q 008636 83 AVPMSGAIFNTINTRLDA-RTISIILKHSESKLVFVDH 119 (558)
Q Consensus 83 A~~~~G~~~v~l~~~~~~-~~l~~~l~~~~~~~ii~~~ 119 (558)
+++..|-.++..++.++. ..+...+...+.++.+++.
T Consensus 81 all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~ 118 (397)
T PRK05939 81 TLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDA 118 (397)
T ss_pred HHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECC
Confidence 444455444444443322 1222334455555555554
No 295
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=25.04 E-value=3.8e+02 Score=21.89 Aligned_cols=85 Identities=11% Similarity=0.035 Sum_probs=49.1
Q ss_pred hhhhhhhHHHHHHHhcceEEEecC--CCHHHHHHHHHHhCCcEEEehH------HHHHHHhcCccccCCCCceEEEEecC
Q 008636 240 FHNNGWSFTWGAAVVGATNVCLRK--FDAPTVFALIRKHGVTHMCGAP------IVLNLLSSSPEAKQLDRPVRILTAGS 311 (558)
Q Consensus 240 ~~~~g~~~~~~~l~~g~~~~~~~~--~~~~~~~~~i~~~~~t~l~~~p------~~l~~l~~~~~~~~~~~l~~v~~~g~ 311 (558)
.|..|-..+...+-.++--++... .+++.+++...+.+++++.... ..+..+.+..+...... ..++.||.
T Consensus 14 ~Hd~g~~iv~~~l~~~GfeVi~lg~~~s~e~~v~aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~~g~~~-i~vivGG~ 92 (132)
T TIGR00640 14 GHDRGAKVIATAYADLGFDVDVGPLFQTPEEIARQAVEADVHVVGVSSLAGGHLTLVPALRKELDKLGRPD-ILVVVGGV 92 (132)
T ss_pred ccHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEcCchhhhHHHHHHHHHHHHhcCCCC-CEEEEeCC
Confidence 466665555566655555554443 4789999999999998876543 23333333333333332 23555655
Q ss_pred CCChhhhHHhhhcCC
Q 008636 312 PPPAPVLLRTESLGF 326 (558)
Q Consensus 312 ~l~~~~~~~~~~~~~ 326 (558)
. +.+....+++.|+
T Consensus 93 ~-~~~~~~~l~~~Gv 106 (132)
T TIGR00640 93 I-PPQDFDELKEMGV 106 (132)
T ss_pred C-ChHhHHHHHHCCC
Confidence 5 4555566666554
No 296
>PRK12483 threonine dehydratase; Reviewed
Probab=24.64 E-value=5.1e+02 Score=27.20 Aligned_cols=61 Identities=10% Similarity=-0.010 Sum_probs=45.2
Q ss_pred EEEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHHH
Q 008636 68 SVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128 (558)
Q Consensus 68 ~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~ 128 (558)
.|.+..+=....+.++|..+|..+..+=|...+......++..+++++++.+........+
T Consensus 88 VV~aSaGNha~gvA~aA~~lGi~~~IvmP~~tp~~Kv~~~r~~GAeVil~g~~~d~a~~~A 148 (521)
T PRK12483 88 VITASAGNHAQGVALAAARLGVKAVIVMPRTTPQLKVDGVRAHGGEVVLHGESFPDALAHA 148 (521)
T ss_pred EEEECCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHH
Confidence 3555557777788889999998888877776666667789999999999976544443333
No 297
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=24.63 E-value=3.9e+02 Score=24.03 Aligned_cols=93 Identities=13% Similarity=0.088 Sum_probs=0.0
Q ss_pred CCCCEEEEecCc-hhhhhh-hHHHHHHHhcceEEEec-CCCHHHHHHHHHHhCCcEEEehHHHHHHHhcCc----cccCC
Q 008636 228 PKQSVLLWTLPM-FHNNGW-SFTWGAAVVGATNVCLR-KFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP----EAKQL 300 (558)
Q Consensus 228 ~~~~~~~~~~p~-~~~~g~-~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~----~~~~~ 300 (558)
..+.+++.+.+- .|..|. ......-..|-.++.+. ...++++.+.+.+++|+++..+-..-....... .-...
T Consensus 87 ~~~~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~~~ 166 (213)
T cd02069 87 SKGKIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNRR 166 (213)
T ss_pred CCCeEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHHhc
Q ss_pred CCceEEEEecCCCChhhhHH
Q 008636 301 DRPVRILTAGSPPPAPVLLR 320 (558)
Q Consensus 301 ~~l~~v~~~g~~l~~~~~~~ 320 (558)
..--.+++||.+++++....
T Consensus 167 ~~~~~i~vGG~~~~~~~~~~ 186 (213)
T cd02069 167 GIKIPLLIGGAATSRKHTAV 186 (213)
T ss_pred CCCCeEEEEChhcCHHHHhh
No 298
>PRK10719 eutA reactivating factor for ethanolamine ammonia lyase; Provisional
Probab=24.12 E-value=5.1e+02 Score=26.57 Aligned_cols=79 Identities=14% Similarity=0.064 Sum_probs=52.5
Q ss_pred ChhhHHHHHhhcC-----CCCceEEECC-ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcC
Q 008636 15 TPLGFIERAATAC-----DDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSG 88 (558)
Q Consensus 15 tl~~~l~~~a~~~-----p~~~a~~~~~-~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G 88 (558)
.+.+.+++....+ -+..|+...+ ...+|+++.+.++.++.++.+. ++++..+.|++++..--++-+.--..++
T Consensus 355 ~l~~~i~~~l~~f~~~~~~~~~alal~g~~~~~y~~iq~la~~i~~~~~~~-~~~~~Pliiv~e~D~aK~LGq~l~~~l~ 433 (475)
T PRK10719 355 DLVAAIQQALAWFDLDPETDAYALALPGSLPPSYAAIQTLAKALVDGVARF-PNKPHPLIVVAEQDMGKALGQLLRPQLP 433 (475)
T ss_pred hHHHHHHHHHHHhhccCCcCcEEEEcCCCCCCCHHHHHHHHHHHHHHHHhh-ccCCCCEEEEEcccHHHHHHHHHHHhcC
Confidence 4555555444331 2456777754 7999999999999999999985 4557788888888876665444333333
Q ss_pred --cEEEec
Q 008636 89 --AIFNTI 94 (558)
Q Consensus 89 --~~~v~l 94 (558)
...+++
T Consensus 434 ~~~~iicI 441 (475)
T PRK10719 434 KQLPLICI 441 (475)
T ss_pred CCCCEEEE
Confidence 444444
No 299
>PRK08813 threonine dehydratase; Provisional
Probab=24.04 E-value=6.6e+02 Score=24.72 Aligned_cols=57 Identities=9% Similarity=-0.092 Sum_probs=42.2
Q ss_pred EEEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEEEeCcChHH
Q 008636 68 SVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSL 124 (558)
Q Consensus 68 ~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 124 (558)
.+.+..+=.-..+.++|...|..+..+=|...+......++.++++++.+.......
T Consensus 84 VV~aSsGN~G~alA~aa~~~Gi~~~IvvP~~~~~~K~~~i~~~GAeVv~~g~~~~~a 140 (349)
T PRK08813 84 VICASAGNHAQGVAWSAYRLGVQAITVMPHGAPQTKIAGVAHWGATVRQHGNSYDEA 140 (349)
T ss_pred EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHHcCCEEEEECCCHHHH
Confidence 456666777778888999999877776666656566677799999999997654433
No 300
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=23.81 E-value=1.7e+02 Score=28.51 Aligned_cols=61 Identities=18% Similarity=0.205 Sum_probs=45.9
Q ss_pred HHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEEEeC
Q 008636 55 SLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH 119 (558)
Q Consensus 55 ~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 119 (558)
.|++.+++||++|+|+.--+.-.+..++|-..- +-++.++.+.. -....++.+++.++...
T Consensus 158 alk~~~~~pG~~V~I~G~GGlGh~avQ~Aka~g-a~Via~~~~~~---K~e~a~~lGAd~~i~~~ 218 (339)
T COG1064 158 ALKKANVKPGKWVAVVGAGGLGHMAVQYAKAMG-AEVIAITRSEE---KLELAKKLGADHVINSS 218 (339)
T ss_pred ehhhcCCCCCCEEEEECCcHHHHHHHHHHHHcC-CeEEEEeCChH---HHHHHHHhCCcEEEEcC
Confidence 455678999999999998899999999987543 77777765433 34456678888887754
No 301
>PF05452 Clavanin: Clavanin; InterPro: IPR008453 This family consists of clavanin proteins from the haemocytes of the invertebrate Styela clava (Sea squirt), a solitary tunicate. The family is made up of four alpha-helical antimicrobial peptides, clavanins A, B, C and D. The tunicate peptides resemble magainins in size, primary sequence and antibacterial activity. Synthetic clavanin A displays comparable antimicrobial activity to magainins and cecropins. The presence of alpha-helical antimicrobial peptides in the haemocytes of a urochordate suggests that such peptides are primeval effectors of innate immunity in the vertebrate lineage [].; GO: 0005576 extracellular region
Probab=23.79 E-value=39 Score=23.28 Aligned_cols=7 Identities=57% Similarity=0.753 Sum_probs=6.1
Q ss_pred CceeeCc
Q 008636 421 GRYYTGD 427 (558)
Q Consensus 421 g~~~TGD 427 (558)
-||.|||
T Consensus 73 hwydtgd 79 (80)
T PF05452_consen 73 HWYDTGD 79 (80)
T ss_pred ccccCCC
Confidence 4999998
No 302
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=23.70 E-value=7.7e+02 Score=24.88 Aligned_cols=61 Identities=10% Similarity=-0.048 Sum_probs=49.2
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHhhcCcEEEec--cccCChHHHHHHHhhcCccEEEEeCcCh
Q 008636 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTI--NTRLDARTISIILKHSESKLVFVDHLSS 122 (558)
Q Consensus 62 ~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l--~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 122 (558)
=+|-+|+.+..=.+...+.+..+...|+-+... ||.+..+.....|...+..+.-...+..
T Consensus 30 l~G~~i~~~~hl~~~Ta~l~~~L~~~GA~v~~~~~np~stqd~vaaaL~~~gi~v~a~~~~~~ 92 (406)
T TIGR00936 30 LKGARIAACLHVTVETAVLIETLVAGGAEVAWTSCNPLSTQDDVAAALAKAGIPVFAWRGETN 92 (406)
T ss_pred CCCCEEEEEEechHHHHHHHHHHHHcCCEEEEEccCCccccHHHHHHHHhCCceEEEecCCCH
Confidence 468899999999999999999999999977665 8877888888888888888654433333
No 303
>PLN02409 serine--glyoxylate aminotransaminase
Probab=23.65 E-value=5.3e+02 Score=25.83 Aligned_cols=74 Identities=8% Similarity=-0.013 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCchhHHH-HHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEEEe
Q 008636 44 QTYRRCLQLASSLSS-FGINPGHVVSVIAPNIPAMYE-LHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD 118 (558)
Q Consensus 44 ~l~~~v~~la~~L~~-~Gv~~gd~V~i~~~~~~~~~~-~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~ 118 (558)
++.+..+.+...|.+ .|.++++.| ++..++...+. ++..++.-|-.++..++.........+++..+.++....
T Consensus 39 ~~~~~~~~~~~~l~~~~g~~~~~~v-i~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~ 114 (401)
T PLN02409 39 AFPALTKELLEDVKYIFKTKSGTPF-IFPTTGTGAWESALTNTLSPGDKVVSFRIGQFSLLWIDQMQRLNFDVDVVE 114 (401)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCEE-EEeCCcHHHHHHHHHhcCCCCCEEEEeCCCchhHHHHHHHHHcCCceEEEE
Confidence 444445555555544 355444444 44445544443 344555667666666666655555667777777777664
No 304
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=23.59 E-value=9.6e+02 Score=25.99 Aligned_cols=100 Identities=11% Similarity=-0.073 Sum_probs=67.1
Q ss_pred eecHHHHHHHHHhcc---cccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEec-CCCHHHHHHHHHHhCCcEEEe
Q 008636 208 VQCYKAFFIIAVDSL---IDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLR-KFDAPTVFALIRKHGVTHMCG 283 (558)
Q Consensus 208 ~~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 283 (558)
.+|++.+........ ...++.++|++....+...- .....++++..|+..+.+. ...++++...+++.+++.++.
T Consensus 76 ~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e-w~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~ 154 (660)
T PLN02430 76 WKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQ-WIVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFV 154 (660)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEE
Confidence 468888765554433 34578899998888876432 2345778888899888776 467899999999999999998
Q ss_pred hHHHHHHHhcCccccCCCCceEEEEe
Q 008636 284 APIVLNLLSSSPEAKQLDRPVRILTA 309 (558)
Q Consensus 284 ~p~~l~~l~~~~~~~~~~~l~~v~~~ 309 (558)
....+..++... ....+.++.++..
T Consensus 155 ~~~~~~~~~~~~-~~~~~~l~~ii~~ 179 (660)
T PLN02430 155 QDKKIKELLEPD-CKSAKRLKAIVSF 179 (660)
T ss_pred CHHHHHHHHhhh-cccCCCceEEEEE
Confidence 776544443221 1123345655543
No 305
>PRK07867 acyl-CoA synthetase; Validated
Probab=23.44 E-value=4.4e+02 Score=27.52 Aligned_cols=83 Identities=11% Similarity=-0.046 Sum_probs=59.8
Q ss_pred eecHHHHHHHHHhccccc----ccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEecC-CCHHHHHHHHHHhCCcEEE
Q 008636 208 VQCYKAFFIIAVDSLIDW----VVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRK-FDAPTVFALIRKHGVTHMC 282 (558)
Q Consensus 208 ~~t~~~~~~~~~~~~~~~----~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~-~~~~~~~~~i~~~~~t~l~ 282 (558)
.+|+..+..........+ +..+++++....+... .....+++++..|+..+.++. ..++++...+++.++..++
T Consensus 28 ~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li 106 (529)
T PRK07867 28 FTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTP-EFSLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQLVL 106 (529)
T ss_pred EEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCH-HHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEEE
Confidence 478888765555444433 3566788877776532 234567888899999987764 6788999999999999999
Q ss_pred ehHHHHHHH
Q 008636 283 GAPIVLNLL 291 (558)
Q Consensus 283 ~~p~~l~~l 291 (558)
........+
T Consensus 107 ~~~~~~~~~ 115 (529)
T PRK07867 107 TESAHAELL 115 (529)
T ss_pred ECHhHHHHH
Confidence 988766543
No 306
>PRK12582 acyl-CoA synthetase; Provisional
Probab=23.42 E-value=2.9e+02 Score=29.66 Aligned_cols=78 Identities=8% Similarity=-0.103 Sum_probs=56.0
Q ss_pred eeecHHHHHHHHHhccc---ccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEecC-CC-----HHHHHHHHHHhC
Q 008636 207 VVQCYKAFFIIAVDSLI---DWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRK-FD-----APTVFALIRKHG 277 (558)
Q Consensus 207 v~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~-~~-----~~~~~~~i~~~~ 277 (558)
-.+|++.+......... ..++.++|++....+... ......++++..|+..+.++. .+ .+++...+++.+
T Consensus 79 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~ 157 (624)
T PRK12582 79 RKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSI-EHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVK 157 (624)
T ss_pred EEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCH-HHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhcC
Confidence 46788888655544433 447888999998887532 334567788888999888764 22 378889999999
Q ss_pred CcEEEehH
Q 008636 278 VTHMCGAP 285 (558)
Q Consensus 278 ~t~l~~~p 285 (558)
+..++...
T Consensus 158 ~~~vi~~~ 165 (624)
T PRK12582 158 PRVVFAQS 165 (624)
T ss_pred CcEEEecC
Confidence 99887653
No 307
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=23.24 E-value=9.1e+02 Score=25.85 Aligned_cols=83 Identities=11% Similarity=-0.043 Sum_probs=56.3
Q ss_pred eeecHHHHHHHHHhccccc--ccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEe-cCCC---HHHHHHHHHHhCCcE
Q 008636 207 VVQCYKAFFIIAVDSLIDW--VVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCL-RKFD---APTVFALIRKHGVTH 280 (558)
Q Consensus 207 v~~t~~~~~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~-~~~~---~~~~~~~i~~~~~t~ 280 (558)
..+|++.+..........+ ...++|++...++... ..+...++++..|+..+.+ +... .+++...+++.++..
T Consensus 54 ~~~Ty~el~~~v~~lA~~L~~~~~~gd~V~i~~~n~~-e~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~ 132 (631)
T PRK07769 54 RDLTWSQFGARNRAVGARLQQVTKPGDRVAILAPQNL-DYLIAFFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSA 132 (631)
T ss_pred eEeeHHHHHHHHHHHHHHHHHhcCCCCEEEEEcCCCh-HHHHHHHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCE
Confidence 3578888865544433322 1578899888887653 2235567888889888766 3222 467888999999999
Q ss_pred EEehHHHHHH
Q 008636 281 MCGAPIVLNL 290 (558)
Q Consensus 281 l~~~p~~l~~ 290 (558)
++........
T Consensus 133 vi~~~~~~~~ 142 (631)
T PRK07769 133 ILTTTDSAEG 142 (631)
T ss_pred EEEChHHHHH
Confidence 9988765543
No 308
>PRK08526 threonine dehydratase; Provisional
Probab=23.22 E-value=5.6e+02 Score=25.81 Aligned_cols=59 Identities=5% Similarity=-0.134 Sum_probs=43.2
Q ss_pred EEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEEEeCcChHHHHH
Q 008636 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLE 127 (558)
Q Consensus 69 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~ 127 (558)
|.+..+=....+.++|.++|..+..+=|...+......++.++++++++..........
T Consensus 72 V~aSaGNhg~avA~aa~~~Gi~~~IvmP~~~p~~k~~~~r~~GA~Vv~~g~~~~~a~~~ 130 (403)
T PRK08526 72 IAASAGNHAQGVAISAKKFGIKAVIVMPEATPLLKVSGTKALGAEVILKGDNYDEAYAF 130 (403)
T ss_pred EEECccHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHhCCCEEEEECCCHHHHHHH
Confidence 44566667777888999999888777777665555566899999999997654444333
No 309
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=23.14 E-value=5.1e+02 Score=25.18 Aligned_cols=77 Identities=6% Similarity=-0.061 Sum_probs=39.5
Q ss_pred cHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCchhH-HHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEEEe
Q 008636 41 TWSQTYRRCLQLASSLSS-FGINPGHVVSVIAPNIPAM-YELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD 118 (558)
Q Consensus 41 Ty~~l~~~v~~la~~L~~-~Gv~~gd~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~ 118 (558)
.|....+..+++...+.+ .|..+.+ +++...++.+. ..++.+....|-.++..++......+...++..+.+++.++
T Consensus 26 ~~~~~~~~~~~~~~~la~~~g~~~~~-~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~ 104 (356)
T cd06451 26 RSPEFLALMDEILEGLRYVFQTENGL-TFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGVFGDRWADMAERYGADVDVVE 104 (356)
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCC-EEEEecCcHHHHHHHHHHhCCCCCEEEEecCCchhHHHHHHHHHhCCCeEEee
Confidence 344444445555555555 3553333 45555554443 44444555667655555444333234455666677766653
No 310
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=23.01 E-value=3.5e+02 Score=27.02 Aligned_cols=11 Identities=9% Similarity=-0.118 Sum_probs=5.5
Q ss_pred cHHHHHHHHHH
Q 008636 41 TWSQTYRRCLQ 51 (558)
Q Consensus 41 Ty~~l~~~v~~ 51 (558)
|+.+|.+++..
T Consensus 54 ~~~~lE~~lA~ 64 (385)
T PRK08574 54 TLRPLEEALAK 64 (385)
T ss_pred cHHHHHHHHHH
Confidence 55555554443
No 311
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=22.79 E-value=75 Score=29.26 Aligned_cols=70 Identities=19% Similarity=0.249 Sum_probs=53.3
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccccCC--hHHHHHHHhh-cCccEEEEeC
Q 008636 50 LQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLD--ARTISIILKH-SESKLVFVDH 119 (558)
Q Consensus 50 ~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~--~~~l~~~l~~-~~~~~ii~~~ 119 (558)
..+-..+.+.-..||.-=.+.+|++..+.+.--++.-++.+-+|++|+++ .+.+..+++. +.++++|...
T Consensus 96 DE~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~iK~~F~tS 168 (375)
T KOG0633|consen 96 DELIDLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSKIKCIFLTS 168 (375)
T ss_pred HHHHHHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHHHHHHhccccceEEEEcC
Confidence 34445555555678855667888999999999999999999999999875 5667777654 4889988754
No 312
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=22.27 E-value=3.4e+02 Score=26.26 Aligned_cols=89 Identities=10% Similarity=-0.080 Sum_probs=54.3
Q ss_pred CCceEEECC--ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHHHH
Q 008636 29 DCPSIIYND--TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISII 106 (558)
Q Consensus 29 ~~~a~~~~~--~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 106 (558)
.++.+-.+. .+-+++ .+.+..+...+.+.| ++.|... ..+-.-..+.++|...|..+..+-|...+......
T Consensus 38 ~~i~~K~E~~nptGS~K--~R~a~~~l~~a~~~g---~~~vv~~-SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~ 111 (324)
T cd01563 38 KNLYVKDEGLNPTGSFK--DRGMTVAVSKAKELG---VKAVACA-STGNTSASLAAYAARAGIKCVVFLPAGKALGKLAQ 111 (324)
T ss_pred CceEEEecCCCCcccHH--HhhHHHHHHHHHHcC---CCEEEEe-CCCHHHHHHHHHHHHcCCceEEEEeCCCCHHHHHH
Confidence 456666654 333343 223344444444444 4455444 34445555557888889877776665556666778
Q ss_pred HhhcCccEEEEeCcChH
Q 008636 107 LKHSESKLVFVDHLSSS 123 (558)
Q Consensus 107 l~~~~~~~ii~~~~~~~ 123 (558)
++..++++++++.....
T Consensus 112 l~~~GA~Vi~~~~~~~~ 128 (324)
T cd01563 112 ALAYGATVLAVEGNFDD 128 (324)
T ss_pred HHHcCCEEEEECCcHHH
Confidence 89999999999875433
No 313
>PRK09192 acyl-CoA synthetase; Validated
Probab=22.26 E-value=5.3e+02 Score=27.25 Aligned_cols=84 Identities=7% Similarity=-0.057 Sum_probs=60.0
Q ss_pred eeecHHHHHHHHHhccc---ccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEecC-CC-------HHHHHHHHHH
Q 008636 207 VVQCYKAFFIIAVDSLI---DWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRK-FD-------APTVFALIRK 275 (558)
Q Consensus 207 v~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~-~~-------~~~~~~~i~~ 275 (558)
-.+|+..+......... ..++.+++++....+... ......++++..|+..+.++. .. .+++...+++
T Consensus 48 ~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~-~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~ 126 (579)
T PRK09192 48 EALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDG-DFVEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLAS 126 (579)
T ss_pred EEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCch-hHHHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHHh
Confidence 46788888655444333 347889999998888743 233557788889999888752 11 5788999999
Q ss_pred hCCcEEEehHHHHHHH
Q 008636 276 HGVTHMCGAPIVLNLL 291 (558)
Q Consensus 276 ~~~t~l~~~p~~l~~l 291 (558)
.++..++........+
T Consensus 127 ~~~~~il~~~~~~~~~ 142 (579)
T PRK09192 127 AQPAAIITPDELLPWV 142 (579)
T ss_pred cCCCEEEeChHHHHHH
Confidence 9999999887655444
No 314
>PRK13390 acyl-CoA synthetase; Provisional
Probab=22.26 E-value=8e+02 Score=25.19 Aligned_cols=78 Identities=12% Similarity=0.084 Sum_probs=56.8
Q ss_pred eecHHHHHHHHHhccc---ccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEecC-CCHHHHHHHHHHhCCcEEEe
Q 008636 208 VQCYKAFFIIAVDSLI---DWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRK-FDAPTVFALIRKHGVTHMCG 283 (558)
Q Consensus 208 ~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~-~~~~~~~~~i~~~~~t~l~~ 283 (558)
.+|+..+......... ..++.++|++....+.... .+...++++..|+..+.++. ..+..+...++..++..+..
T Consensus 24 ~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~-~~~~~la~~~~Ga~~~~l~~~~~~~~~~~~~~~~~~~~~i~ 102 (501)
T PRK13390 24 QVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPE-ALVVLWAALRSGLYITAINHHLTAPEADYIVGDSGARVLVA 102 (501)
T ss_pred EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHH-HHHHHHHHHHhCCEEeccccCCCHHHHHHHHHhcCCcEEEE
Confidence 5888888655544443 3467889998888776442 23567788889998887764 67888888999999988877
Q ss_pred hHH
Q 008636 284 API 286 (558)
Q Consensus 284 ~p~ 286 (558)
...
T Consensus 103 ~~~ 105 (501)
T PRK13390 103 SAA 105 (501)
T ss_pred cch
Confidence 553
No 315
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=22.20 E-value=6.4e+02 Score=23.87 Aligned_cols=90 Identities=11% Similarity=0.080 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccccCChHH---HHHHHhhcCccEEEEe
Q 008636 42 WSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDART---ISIILKHSESKLVFVD 118 (558)
Q Consensus 42 y~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~---l~~~l~~~~~~~ii~~ 118 (558)
++++.++.+.+-.++++.--....+..+..-+...+++-.|++-..+..-.--....++.+ +...++..+.++||++
T Consensus 156 ~~~~~~~L~~l~~~~~~~~~~~~~~~~v~~H~af~Yl~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e 235 (286)
T cd01019 156 LEAFNARLAELDATIKERLAPVKTKPFFVFHDAYGYFEKRYGLTQAGVFTIDPEIDPGAKRLAKIRKEIKEKGATCVFAE 235 (286)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCCeEEEecccHHHHHHHcCCceeeeecCCCCCCCCHHHHHHHHHHHHHcCCcEEEec
Confidence 3444455555555444421112345556666677777766665444422111122334444 5566778999999998
Q ss_pred CcChHHHHHHhhc
Q 008636 119 HLSSSLLLEVVSL 131 (558)
Q Consensus 119 ~~~~~~~~~~~~~ 131 (558)
........+.+..
T Consensus 236 ~~~~~~~~~~ia~ 248 (286)
T cd01019 236 PQFHPKIAETLAE 248 (286)
T ss_pred CCCChHHHHHHHH
Confidence 8776665555543
No 316
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=22.20 E-value=3.6e+02 Score=28.26 Aligned_cols=81 Identities=16% Similarity=0.046 Sum_probs=59.1
Q ss_pred cccHHHHHHHHHHHHH-HHHhCCCCCCCEEEEEcC--CchhHHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEE
Q 008636 39 TYTWSQTYRRCLQLAS-SLSSFGINPGHVVSVIAP--NIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLV 115 (558)
Q Consensus 39 ~~Ty~~l~~~v~~la~-~L~~~Gv~~gd~V~i~~~--~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (558)
.+|+.. .-..|. ...-.|+++.|+|=+.+| ++.-.++-+-+|+..|+++| +....|++..=+=-.+.++.++
T Consensus 261 vith~r----~~~~a~g~~~~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~V-lrkKFSAS~FW~DC~k~~~Tv~ 335 (649)
T KOG1179|consen 261 VITHLR----YLQGAAGFYYVFGMTADDVVYTTLPLYHSAAGILGIGGCLLHGATVV-LRKKFSASNFWDDCRKYNVTVI 335 (649)
T ss_pred HHHHHH----HHHHHHHHHHHhCCCccceEEEcchhHHHHHHHHHHHHHHhcCceEE-EecccchhhhHHHHHHhCCeee
Confidence 355544 444555 444578999999888876 57788889999999999977 6788998887777788888877
Q ss_pred EEeCcChHH
Q 008636 116 FVDHLSSSL 124 (558)
Q Consensus 116 i~~~~~~~~ 124 (558)
-.=.|....
T Consensus 336 QYIGElcRY 344 (649)
T KOG1179|consen 336 QYIGELCRY 344 (649)
T ss_pred ehHHHHHHH
Confidence 544443333
No 317
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=22.10 E-value=5.9e+02 Score=26.56 Aligned_cols=90 Identities=10% Similarity=0.044 Sum_probs=58.8
Q ss_pred CCCCceEEEC---------CccccHHHHHHHHHHHHHHHHhCCCCCC-CEEEEEcCCc--hhHHHHHHHHhhcCcEEEec
Q 008636 27 CDDCPSIIYN---------DTTYTWSQTYRRCLQLASSLSSFGINPG-HVVSVIAPNI--PAMYELHFAVPMSGAIFNTI 94 (558)
Q Consensus 27 ~p~~~a~~~~---------~~~~Ty~~l~~~v~~la~~L~~~Gv~~g-d~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l 94 (558)
.++.++++.. +..+|++.+...+..+. ...++.++ |++...+|.. ..++..+++.+..|+..+.+
T Consensus 150 ~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~---~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~ 226 (545)
T PRK07768 150 GEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMF---VAAEFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKV 226 (545)
T ss_pred CCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHH---HhcCCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEe
Confidence 3466766542 14688888876554433 33567776 7877776654 34555566778889988877
Q ss_pred cccC---ChHHHHHHHhhcCccEEEEeC
Q 008636 95 NTRL---DARTISIILKHSESKLVFVDH 119 (558)
Q Consensus 95 ~~~~---~~~~l~~~l~~~~~~~ii~~~ 119 (558)
.+.. .+..+..++++.++.++.+..
T Consensus 227 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 254 (545)
T PRK07768 227 TPMDFLRDPLLWAELISKYRGTMTAAPN 254 (545)
T ss_pred CHHHHHHhHHHHHHHHHHhCCEEEECch
Confidence 6532 455677889999999765433
No 318
>PRK10287 thiosulfate:cyanide sulfurtransferase; Provisional
Probab=21.98 E-value=3.1e+02 Score=21.32 Aligned_cols=50 Identities=4% Similarity=-0.086 Sum_probs=34.4
Q ss_pred ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEec
Q 008636 38 TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTI 94 (558)
Q Consensus 38 ~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 94 (558)
..+.+.++.+ .+.+.+..+.+.|.++|.++.....+...+.+.|...+.+
T Consensus 41 iniP~~~l~~-------~l~~l~~~~~~~IVlyC~~G~rS~~aa~~L~~~G~~~v~~ 90 (104)
T PRK10287 41 INIPLKEVKE-------RIATAVPDKNDTVKLYCNAGRQSGQAKEILSEMGYTHAEN 90 (104)
T ss_pred EECCHHHHHH-------HHHhcCCCCCCeEEEEeCCChHHHHHHHHHHHcCCCeEEe
Confidence 3566665443 4555555666789999999888777777888888765533
No 319
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=21.92 E-value=87 Score=17.68 Aligned_cols=22 Identities=18% Similarity=0.359 Sum_probs=17.4
Q ss_pred ccCCCCCCcchhHHHHHHHhhc
Q 008636 530 ELPKTATGKVQKYVLGDIANSM 551 (558)
Q Consensus 530 ~~P~t~~GK~~r~~l~~~~~~~ 551 (558)
.+-++.+|+|++..++++++++
T Consensus 8 ~~D~d~dG~I~~~Ef~~~~~~L 29 (29)
T PF00036_consen 8 EFDKDGDGKIDFEEFKEMMKKL 29 (29)
T ss_dssp HHSTTSSSEEEHHHHHHHHHHT
T ss_pred HHCCCCCCcCCHHHHHHHHHhC
Confidence 4567789999999999887653
No 320
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=21.85 E-value=8.7e+02 Score=24.82 Aligned_cols=85 Identities=8% Similarity=-0.005 Sum_probs=58.9
Q ss_pred ccccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchh-HHHHHHHHhhcCcEEEecccc--CChHHHHHHHhhcCccE
Q 008636 38 TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPA-MYELHFAVPMSGAIFNTINTR--LDARTISIILKHSESKL 114 (558)
Q Consensus 38 ~~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~--~~~~~l~~~l~~~~~~~ 114 (558)
..+|++.+...+..++.. .++..++++....|-+.. .+...++.+..|...+..+.. .+...+...++..++..
T Consensus 161 v~~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~~~~~~t~ 237 (503)
T PRK04813 161 VQISHDNLVSFTNWMLED---FALPEGPQFLNQAPYSFDLSVMDLYPTLASGGTLVALPKDMTANFKQLFETLPQLPINV 237 (503)
T ss_pred EEeehHHHHHHHHHHHHH---cCCCcCceeeecCCcchhHhHHHHHHHHhcCCEEEEcChhhhcCHHHHHHHHHHcCCeE
Confidence 468898888766655443 567788887777665533 244566778889888877653 35667778889999988
Q ss_pred EEEeCcChHHH
Q 008636 115 VFVDHLSSSLL 125 (558)
Q Consensus 115 ii~~~~~~~~~ 125 (558)
+.........+
T Consensus 238 ~~~~p~~~~~~ 248 (503)
T PRK04813 238 WVSTPSFADMC 248 (503)
T ss_pred EEeChHHHHHH
Confidence 88766555443
No 321
>PRK13578 ornithine decarboxylase; Provisional
Probab=21.74 E-value=2.6e+02 Score=30.49 Aligned_cols=48 Identities=21% Similarity=0.212 Sum_probs=33.4
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccccC---------ChHH-----HHHHHhhc
Q 008636 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRL---------DART-----ISIILKHS 110 (558)
Q Consensus 61 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~---------~~~~-----l~~~l~~~ 110 (558)
+++||.|+ +-.|+--.+..- |+..+|+.++.+.|.. +.+. ++..++..
T Consensus 211 ~~~Gd~VL-vdRN~HKSv~hg-aLiLsGa~PVYl~P~~n~~Gi~g~I~~~~~~~~~i~~~i~~~ 272 (720)
T PRK13578 211 LTPGDLVL-FDRNNHKSNHHG-ALIQAGATPVYLETARNPFGFIGGIDAHCFDEEYLREQIREV 272 (720)
T ss_pred cCCCCEEE-eecccHHHHHHH-HHHHcCCeEEEeeccccccCCcCCCChHHccHHHHHHHHHhc
Confidence 57899654 666666664332 6899999999998865 3333 77777765
No 322
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=21.71 E-value=4.2e+02 Score=26.42 Aligned_cols=51 Identities=14% Similarity=0.178 Sum_probs=24.8
Q ss_pred EEcCCchhHHH-HHHHHhhcCcEEEeccccCCh--HHHHHHHhhcCccEEEEeC
Q 008636 69 VIAPNIPAMYE-LHFAVPMSGAIFNTINTRLDA--RTISIILKHSESKLVFVDH 119 (558)
Q Consensus 69 i~~~~~~~~~~-~~lA~~~~G~~~v~l~~~~~~--~~l~~~l~~~~~~~ii~~~ 119 (558)
++.+.+.+.+. ++.+++..|-.++..+|.++. ..+..+......++.+++.
T Consensus 70 ~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~ 123 (382)
T TIGR02080 70 VVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQ 123 (382)
T ss_pred EEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECC
Confidence 34444444443 333555666666655666653 2233334444455555543
No 323
>cd06447 D-Ser-dehyd D-Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- or D-serine to pyruvate and ammonia. D-serine dehydratase serves as a detoxifying enzyme in most E. coli strains where D-serine is a competitive antagonist of beta-alanine in the biosynthetic pathway to pentothenate and coenzyme A. D-serine dehydratase is different from other pyridoxal-5'-phosphate-dependent enzymes in that it catalyzes alpha, beta-elimination reactions on amino acids.
Probab=21.67 E-value=4e+02 Score=26.83 Aligned_cols=59 Identities=7% Similarity=-0.108 Sum_probs=46.1
Q ss_pred EEEEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEEEeCcChHHH
Q 008636 67 VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLL 125 (558)
Q Consensus 67 V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 125 (558)
-.+.+..+=.-+.+.++|...|..+..+=|...+......++..++++++++.......
T Consensus 136 ~VV~aSsGN~G~alA~~a~~~G~~~~IvvP~~~~~~K~~~ira~GAeVv~v~~~~~~a~ 194 (404)
T cd06447 136 SIAVGSTGNLGLSIGIMAAALGFKVTVHMSADAKQWKKDKLRSKGVTVVEYETDYSKAV 194 (404)
T ss_pred EEEEECccHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEECCCHHHHH
Confidence 45666667777888889999998888777777777778889999999999986554443
No 324
>cd01529 4RHOD_Repeats Member of the Rhodanese Homology Domain superfamily. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. Only the second and most of the fourth repeats contain the putative catalytic Cys residue. This CD aligns the 1st , 2nd, 3rd, and 4th repeats.
Probab=21.57 E-value=3.5e+02 Score=20.17 Aligned_cols=48 Identities=8% Similarity=-0.065 Sum_probs=30.2
Q ss_pred cccHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHhhcCc
Q 008636 39 TYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGA 89 (558)
Q Consensus 39 ~~Ty~~l~~~v~~la~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 89 (558)
.+.+.++......+.. +.. ..+++.|.+++..+.....+...+...|.
T Consensus 34 ~ip~~~~~~~~~~~~~-~~~--~~~~~~ivv~c~~g~~s~~~~~~l~~~G~ 81 (96)
T cd01529 34 SIPGAALVLRSQELQA-LEA--PGRATRYVLTCDGSLLARFAAQELLALGG 81 (96)
T ss_pred eCCHHHhcCCHHHHHH-hhc--CCCCCCEEEEeCChHHHHHHHHHHHHcCC
Confidence 4566666544444432 322 35677899999887777666666677775
No 325
>PRK02228 V-type ATP synthase subunit F; Provisional
Probab=21.37 E-value=3.8e+02 Score=20.63 Aligned_cols=76 Identities=12% Similarity=0.139 Sum_probs=43.9
Q ss_pred EEEEEcCCchhHHHHHHHHhhcCcEEEe-ccc-cCChHHHHHHHhhcCccEEEEeCcChHHHHHHhhcCCCCCCCCcEEE
Q 008636 66 VVSVIAPNIPAMYELHFAVPMSGAIFNT-INT-RLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVL 143 (558)
Q Consensus 66 ~V~i~~~~~~~~~~~~lA~~~~G~~~v~-l~~-~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (558)
+++++.. .+++ ++.-.+|.-.++ .+. ..-.+.+..++.+-+..+++.++.....+.+...........+.++.
T Consensus 2 kIaVIGD--~dtv---~GFrLaGi~~~~~~~~~ee~~~~l~~l~~~~d~gII~Ite~~~~~i~e~i~~~~~~~~~P~ii~ 76 (100)
T PRK02228 2 EIAVIGS--PEFT---TGFRLAGIRKVYEVPDDEKLDEAVEEVLEDDDVGILVMHDDDLEKLPRRLRRTLEESVEPTVVT 76 (100)
T ss_pred EEEEEeC--HHHH---HHHHHcCCceEEeeCCHHHHHHHHHHHhhCCCEEEEEEehhHhHhhHHHHHHHHhcCCCCEEEE
Confidence 3566665 3433 444556664333 222 22334466666677788999998877777666655333334666777
Q ss_pred EcC
Q 008636 144 ITD 146 (558)
Q Consensus 144 ~~~ 146 (558)
+.+
T Consensus 77 IP~ 79 (100)
T PRK02228 77 LGG 79 (100)
T ss_pred ECC
Confidence 753
No 326
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=21.25 E-value=4.9e+02 Score=26.70 Aligned_cols=68 Identities=18% Similarity=0.282 Sum_probs=41.9
Q ss_pred cccHHHHHHHHHHH--------------HHHH-HhCCCCCCCEEEEEcCCchhHHHHHHH-HhhcCcEEEec--------
Q 008636 39 TYTWSQTYRRCLQL--------------ASSL-SSFGINPGHVVSVIAPNIPAMYELHFA-VPMSGAIFNTI-------- 94 (558)
Q Consensus 39 ~~Ty~~l~~~v~~l--------------a~~L-~~~Gv~~gd~V~i~~~~~~~~~~~~lA-~~~~G~~~v~l-------- 94 (558)
.-||.+|.+.+..+ |..| ...++++||.| .+..++...-| +...|++++=+
T Consensus 77 d~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v~pGd~V-----p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~~ 151 (460)
T PRK13237 77 SRNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAIKPGQYV-----PGNMYFTTTRYHQELNGGIFVDIIIDEAHDA 151 (460)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCCCCcCEE-----CCccchHhhHHHHHhCCcEEEeeeccccccc
Confidence 34777777776533 3332 34689999965 33334444444 67788876633
Q ss_pred ------cccCChHHHHHHHhhcC
Q 008636 95 ------NTRLDARTISIILKHSE 111 (558)
Q Consensus 95 ------~~~~~~~~l~~~l~~~~ 111 (558)
.-..+.+.++..++...
T Consensus 152 ~~~~p~tgnlD~d~Le~~I~~~~ 174 (460)
T PRK13237 152 QSDHPFKGNVDLDKLQALIDEVG 174 (460)
T ss_pred ccCCCCCCCcCHHHHHHHhcccc
Confidence 33567888888887543
No 327
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=21.15 E-value=4.8e+02 Score=27.26 Aligned_cols=83 Identities=11% Similarity=0.003 Sum_probs=59.4
Q ss_pred eecHHHHHHHHHhccc---ccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEecC-CCHHHHHHHHHHhCCcEEEe
Q 008636 208 VQCYKAFFIIAVDSLI---DWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRK-FDAPTVFALIRKHGVTHMCG 283 (558)
Q Consensus 208 ~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~-~~~~~~~~~i~~~~~t~l~~ 283 (558)
.+|+..+......... ..++..++++....+-... .....++++..|+..+.++. ....++...+++.++..++.
T Consensus 42 ~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~-~~~~~~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~ 120 (542)
T PRK07786 42 TTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTE-FVESVLAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVT 120 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEE
Confidence 5788887554443332 3467888998887765432 24567888888999887764 57888999999999999988
Q ss_pred hHHHHHHH
Q 008636 284 APIVLNLL 291 (558)
Q Consensus 284 ~p~~l~~l 291 (558)
.+.....+
T Consensus 121 ~~~~~~~~ 128 (542)
T PRK07786 121 EAALAPVA 128 (542)
T ss_pred ccchHHHH
Confidence 87655443
No 328
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=21.08 E-value=4.4e+02 Score=25.07 Aligned_cols=57 Identities=9% Similarity=-0.025 Sum_probs=41.2
Q ss_pred CEEEEEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEEEeCcCh
Q 008636 65 HVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122 (558)
Q Consensus 65 d~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 122 (558)
+.|.. +..+-.-..+.++|...|..++.+-|..........++..++++++++....
T Consensus 66 ~~iv~-~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~l~~~Ga~vi~~~~~~~ 122 (304)
T cd01562 66 KGVVA-ASAGNHAQGVAYAAKLLGIPATIVMPETAPAAKVDATRAYGAEVVLYGEDFD 122 (304)
T ss_pred CcEEE-ECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCCCHH
Confidence 34433 4456667777778888898777776766566667789999999999987533
No 329
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=20.99 E-value=5.2e+02 Score=27.20 Aligned_cols=88 Identities=17% Similarity=0.084 Sum_probs=55.5
Q ss_pred ccccHHHHHHHHHHHHHHHHhCC------CCCCCEEEEEcCCch---hHHHHHHHHhhcCcEEEeccccCChHHHHHHHh
Q 008636 38 TTYTWSQTYRRCLQLASSLSSFG------INPGHVVSVIAPNIP---AMYELHFAVPMSGAIFNTINTRLDARTISIILK 108 (558)
Q Consensus 38 ~~~Ty~~l~~~v~~la~~L~~~G------v~~gd~V~i~~~~~~---~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~ 108 (558)
..+|++.+...+..++..+...+ +..++.+.+..-+-. .+....+.++..|...+..........+...++
T Consensus 225 v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~ 304 (562)
T PRK12492 225 AMLTHGNLVANMLQVRACLSQLGPDGQPLMKEGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELG 304 (562)
T ss_pred EEEechhHHHHHHHHHHHHhcccccccccccCCCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHH
Confidence 46888888888887777775433 456665544322222 222334556677876665544456677778899
Q ss_pred hcCccEEEEeCcChHHH
Q 008636 109 HSESKLVFVDHLSSSLL 125 (558)
Q Consensus 109 ~~~~~~ii~~~~~~~~~ 125 (558)
+.++.+++........+
T Consensus 305 ~~~~t~~~~~p~~~~~l 321 (562)
T PRK12492 305 KWRFSALLGLNTLFVAL 321 (562)
T ss_pred HhCCceeeCcHHHHHHH
Confidence 99999988766544443
No 330
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=20.66 E-value=3.8e+02 Score=25.36 Aligned_cols=55 Identities=15% Similarity=0.202 Sum_probs=34.1
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEecccc----------CChHHHHHHHhh-cCccEEEEe
Q 008636 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTR----------LDARTISIILKH-SESKLVFVD 118 (558)
Q Consensus 61 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~----------~~~~~l~~~l~~-~~~~~ii~~ 118 (558)
+++||.|.+.-+.... ...++...|+.++.+.+. .+.+.++..++. .++++++..
T Consensus 96 ~~~gd~Vlv~~~~h~s---~~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~ 161 (294)
T cd00615 96 CGPGDKILIDRNCHKS---VINGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVIT 161 (294)
T ss_pred CCCCCEEEEeCCchHH---HHHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEE
Confidence 4688988776554332 234455678877777553 356778777764 456765554
No 331
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=20.64 E-value=6.5e+02 Score=25.14 Aligned_cols=54 Identities=4% Similarity=-0.094 Sum_probs=44.0
Q ss_pred EEcCCchhHHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEEEeCcCh
Q 008636 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122 (558)
Q Consensus 69 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 122 (558)
|++.-+=....+.||+.++|+.+..+=|...+...-..++..++.+++..+...
T Consensus 118 iasSaGNha~a~Ayaa~~LgipaTIVmP~~tp~~kiq~~~nlGA~Vil~G~~~d 171 (457)
T KOG1250|consen 118 IASSAGNHAQAAAYAARKLGIPATIVMPVATPLMKIQRCRNLGATVILSGEDWD 171 (457)
T ss_pred EEecCccHHHHHHHHHHhcCCceEEEecCCChHHHHHHHhccCCEEEEecccHH
Confidence 344455667888999999999999999998888888889999999988765433
No 332
>COG2885 OmpA Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane]
Probab=20.46 E-value=2.7e+02 Score=24.35 Aligned_cols=64 Identities=14% Similarity=0.118 Sum_probs=42.6
Q ss_pred CCCCCCCCCChhhHHHHHhhcCCCCceEEECC----ccccHHHH--HHHHHHHHHHHHhCCCCCCCEEEEE
Q 008636 6 PNPANSCPLTPLGFIERAATACDDCPSIIYND----TTYTWSQT--YRRCLQLASSLSSFGINPGHVVSVI 70 (558)
Q Consensus 6 ~~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~----~~~Ty~~l--~~~v~~la~~L~~~Gv~~gd~V~i~ 70 (558)
+....+......+-+....+.+|..-..+... .+-.|.+- .+|++.++.+|.+.|+.++ +|.+.
T Consensus 91 s~~l~p~~~~~L~~~a~~L~~~p~~~i~V~GHTD~~Gs~~yN~~LS~rRA~aV~~~L~~~Gv~~~-~i~~~ 160 (190)
T COG2885 91 SSVLKPKAQATLDELAKYLKKNPITRILVEGHTDSTGSDEYNQALSERRAEAVADYLVSQGVVAD-RISTV 160 (190)
T ss_pred ccccCHhHHHHHHHHHHHHHhCCCcEEEEEecCCCCCCHHHhHHHHHHHHHHHHHHHHHcCCCcc-cEEEE
Confidence 34444455666777788888888666666533 23444432 4578999999999998777 66554
No 333
>PLN02238 hypoxanthine phosphoribosyltransferase
Probab=20.36 E-value=2.6e+02 Score=24.64 Aligned_cols=22 Identities=23% Similarity=0.217 Sum_probs=20.0
Q ss_pred ccccHHHHHHHHHHHHHHHHhC
Q 008636 38 TTYTWSQTYRRCLQLASSLSSF 59 (558)
Q Consensus 38 ~~~Ty~~l~~~v~~la~~L~~~ 59 (558)
.-+||.|+.+++.++|..+.+.
T Consensus 10 ~lis~~~I~~~i~~lA~~I~~~ 31 (189)
T PLN02238 10 VLWTAEDISARVAELAAQIASD 31 (189)
T ss_pred EEcCHHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999985
No 334
>PF01297 TroA: Periplasmic solute binding protein family; InterPro: IPR006127 This is a family of ABC transporter metal-binding lipoproteins. An example is the periplasmic zinc-binding protein TroA P96116 from SWISSPROT that interacts with an ATP-binding cassette transport system in Treponema pallidum and plays a role in the transport of zinc across the cytoplasmic membrane. Related proteins are found in both Gram-positive and Gram-negative bacteria. ; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2PS9_A 2PS0_A 2OSV_A 2OGW_A 2PS3_A 2PRS_B 3MFQ_C 3GI1_B 2OV3_A 1PQ4_A ....
Probab=20.33 E-value=3.8e+02 Score=24.78 Aligned_cols=85 Identities=16% Similarity=0.273 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHHHhC--CCCCCCEEEEEcCCchhHHHHHHHHhhcCcEEEeccc--cCChHH---HHHHHhhcCccE
Q 008636 42 WSQTYRRCLQLASSLSSF--GINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINT--RLDART---ISIILKHSESKL 114 (558)
Q Consensus 42 y~~l~~~v~~la~~L~~~--Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~--~~~~~~---l~~~l~~~~~~~ 114 (558)
++++.++...+...+.+. .+ ++ +..+.+.+...++.-.|++-..+.. -..+ ..++.. +...++..+.++
T Consensus 127 ~~~~~~~L~~l~~~~~~~~~~~-~~-~~~v~~h~~~~Y~~~~~gl~~~~~~--~~~~~~~ps~~~l~~l~~~ik~~~v~~ 202 (256)
T PF01297_consen 127 AEKYLKELDELDAEIKEKLAKL-PG-RPVVVYHDAFQYFAKRYGLKVIGVI--EISPGEEPSPKDLAELIKLIKENKVKC 202 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTS-SG-GEEEEEESTTHHHHHHTT-EEEEEE--SSSSSSSS-HHHHHHHHHHHHHTT-SE
T ss_pred HHHHHHHHHHHHHHHHHHhhcc-cC-CeEEEEChHHHHHHHhcCCceeeee--ccccccCCCHHHHHHHHHHhhhcCCcE
Confidence 344555555555555542 22 22 5666777788888777777666655 1222 233444 566678999999
Q ss_pred EEEeCcChHHHHHHhh
Q 008636 115 VFVDHLSSSLLLEVVS 130 (558)
Q Consensus 115 ii~~~~~~~~~~~~~~ 130 (558)
||++........+.+.
T Consensus 203 i~~e~~~~~~~~~~la 218 (256)
T PF01297_consen 203 IFTEPQFSSKLAEALA 218 (256)
T ss_dssp EEEETTS-THHHHHHH
T ss_pred EEecCCCChHHHHHHH
Confidence 9999877776555553
No 335
>PTZ00297 pantothenate kinase; Provisional
Probab=20.33 E-value=9.3e+02 Score=29.16 Aligned_cols=97 Identities=14% Similarity=0.056 Sum_probs=69.3
Q ss_pred eecHHHHHHHHHhc---ccccccCCCCEEEEecCchhhhhhhHHHHHHHhcceEEEecCCCHHHHHHHHHHhCCcEEEeh
Q 008636 208 VQCYKAFFIIAVDS---LIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGA 284 (558)
Q Consensus 208 ~~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~ 284 (558)
.+|++.+....... ....++.++|++....+-..- .....++++..|+..+.+.. +...+...+++.++.+++..
T Consensus 457 ~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~E-wvia~lA~~~~GaV~VPly~-t~~eL~yIL~~S~akvVfv~ 534 (1452)
T PTZ00297 457 WLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRN-IVILEVACALYGFTTLPLVG-KGSTMRTLIDEHKIKVVFAD 534 (1452)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCEEEeCCC-CHHHHHHHHHhcCCcEEEEc
Confidence 57888875544433 345688999999888876432 23456778888988887753 56788899999999999999
Q ss_pred HHHHHHHhcCccccCCCCceEEEEec
Q 008636 285 PIVLNLLSSSPEAKQLDRPVRILTAG 310 (558)
Q Consensus 285 p~~l~~l~~~~~~~~~~~l~~v~~~g 310 (558)
...+..+.+... ..++.|++.+
T Consensus 535 ~~~l~kl~~i~~----~~Lr~IIv~d 556 (1452)
T PTZ00297 535 RNSVAAILTCRS----RKLETVVYTH 556 (1452)
T ss_pred hhHHHHHHhhcc----cCCcEEEEEC
Confidence 888887765422 2577777654
No 336
>TIGR01747 diampropi_NH3ly diaminopropionate ammonia-lyase family. This small subfamily includes diaminopropionate ammonia-lyase from Salmonella typhimurium and a small number of close homologs, about 50 % identical in sequence. The enzyme is a pyridoxal phosphate-binding homodimer homologous to threonine dehydratase (threonine deaminase).
Probab=20.27 E-value=8.6e+02 Score=24.19 Aligned_cols=106 Identities=10% Similarity=-0.026 Sum_probs=64.6
Q ss_pred hhHHHHHhhcCC-CCceEEECCcc---ccHHHHHHHHHHHHHHHHhC----------------CCC--CCCEEEEEcCCc
Q 008636 17 LGFIERAATACD-DCPSIIYNDTT---YTWSQTYRRCLQLASSLSSF----------------GIN--PGHVVSVIAPNI 74 (558)
Q Consensus 17 ~~~l~~~a~~~p-~~~a~~~~~~~---~Ty~~l~~~v~~la~~L~~~----------------Gv~--~gd~V~i~~~~~ 74 (558)
.--+...++... .++.+-.+..+ -+|+..-.... ++..+.+. .++ .|.+..+....+
T Consensus 25 L~~~~~l~~~~g~~~v~~K~E~~~~~tgSFK~RG~~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~aSsG 103 (376)
T TIGR01747 25 LCALDHLANLLGLKKILVKDESKRFGLNAFKMLGGSYA-IAQYLAEKLHLDIETLSFEHLKNDAIGEKMGQATFATATDG 103 (376)
T ss_pred CcchHHHHHHhCCCcEEEeeCCCCCCCCChHHHHHHHH-HHHHHHHHhCCCcccCCHHHHhhhHHHhhcCCCEEEEECcc
Confidence 333344444444 46777776643 36665544333 44443321 111 123445666666
Q ss_pred hhHHHHHHHHhhcCcEEEeccccCChHHHHHHHhhcCccEEEEeCcChH
Q 008636 75 PAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123 (558)
Q Consensus 75 ~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 123 (558)
=.-..+.++|...|..+..+=|...+......++..++++++++.....
T Consensus 104 N~g~a~A~~Aa~~G~~~~I~vP~~~~~~k~~~i~~~GAeVi~v~~~~~~ 152 (376)
T TIGR01747 104 NHGRGVAWAAQQLGQKAVVYMPKGSAQERVENILNLGAECTITDMNYDD 152 (376)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCCHHH
Confidence 6777777888889988777666665566677788999999999875444
Done!