STRING 9.05 
  AT1G07380 protein (Arabidopsis thaliana) - STRING network view
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
AT1G07380
ceramidase family protein; ceramidase family protein; FUNCTIONS IN- ceramidase activity; INVOLVED IN- biological_process unknown; LOCATED IN- plasma membrane; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Neutral/alkaline nonlysosomal ceramidase (InterPro-IPR006823); BEST Arabidopsis thaliana protein match is- ceramidase family protein (TAIR-AT2G38010.1); Has 458 Blast hits to 375 proteins in 133 species- Archae - 0; Bacteria - 160; Metazoa - 157; Fungi - 68; Plants - 30; Viruses - 0; Other Eukaryotes - 43 (source- NCBI BLink). (779 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
AT5G51290
ceramide kinase-related; ceramide kinase-related; FUNCTIONS IN- diacylglycerol kinase activity; [...] (608 aa)
       0.899
SPHK1
SPHK1 (SPHINGOSINE KINASE 1); D-erythro-sphingosine kinase/ diacylglycerol kinase/ sphinganine [...] (1274 aa)
       0.899
DES-1-LIKE
DES-1-LIKE; oxidoreductase/ sphingolipid delta-4 desaturase; Encodes a sphingolipid delta4-desa [...] (332 aa)
       0.899
AT3G06060
short-chain dehydrogenase/reductase (SDR) family protein; short-chain dehydrogenase/reductase ( [...] (326 aa)
       0.899
SBH1
SBH1 (SPHINGOID BASE HYDROXYLASE 1); catalytic/ sphingosine hydroxylase; Encodes one of the two [...] (260 aa)
       0.899
SBH2
SBH2 (SPHINGOID BASE HYDROXYLASE 2); catalytic/ sphingosine hydroxylase; Encodes one of the two [...] (259 aa)
       0.899
 
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Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
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Co-expression Experiments Databases Textmining
 
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