Query         008640
Match_columns 558
No_of_seqs    169 out of 534
Neff          5.9 
Searched_HMMs 13730
Date          Mon Mar 25 08:17:06 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008640.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/008640hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1vc1a_ c.13.2.1 (A:) Anti-sig  45.4      20  0.0014   27.7   6.2   40  466-505     3-42  (110)
  2 d1ko3a_ d.157.1.1 (A:) Zn meta  42.7      18  0.0013   31.3   6.1   48   21-77     39-86  (230)
  3 d2gmna1 d.157.1.1 (A:29-292) Z  36.7      23  0.0016   31.8   5.9   53   16-77     17-76  (264)
  4 d2aioa1 d.157.1.1 (A:23-311) Z  35.2      18  0.0013   32.5   4.9   56   13-77     24-86  (266)
  5 d1hfoa_ d.80.1.3 (A:) Micropha  34.3      24  0.0017   28.1   5.0   42   29-72     52-98  (113)
  6 d1uiza_ d.80.1.3 (A:) Micropha  31.5      28   0.002   27.7   5.0   47   23-72     48-99  (115)
  7 d1th8b_ c.13.2.1 (B:) Anti-sig  31.1      46  0.0033   25.5   6.3   38  467-504     2-39  (115)
  8 d1x8ha_ d.157.1.1 (A:) Zn meta  29.5      25  0.0018   30.5   4.7   48   21-77     24-71  (228)
  9 d2gdga1 d.80.1.3 (A:1-114) Mic  28.3      34  0.0025   27.2   5.0   42   29-72     52-98  (114)
 10 d1mwwa_ d.80.1.4 (A:) Hypothet  26.6      34  0.0025   27.2   4.7   45   29-75     55-104 (120)
 11 d1p9ea_ d.157.1.5 (A:) Methyl   23.6      17  0.0013   33.3   2.5   54   17-77     59-115 (294)
 12 d1dpta_ d.80.1.3 (A:) D-dopach  22.4      42  0.0031   26.7   4.5   42   29-72     52-99  (117)
 13 d1mqoa_ d.157.1.1 (A:) Zn meta  22.1      74  0.0054   27.3   6.6   49   20-77     35-83  (221)
 14 d1yx0a1 d.108.1.1 (A:1-151) Hy  21.5      58  0.0043   26.8   5.4   54  157-211    42-97  (151)
 15 d1lf7a_ b.60.1.1 (A:) Compleme  20.7      98  0.0072   24.9   6.8   51   26-80    112-162 (171)

No 1  
>d1vc1a_ c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa {Thermotoga maritima [TaxId: 2336]}
Probab=45.37  E-value=20  Score=27.69  Aligned_cols=40  Identities=20%  Similarity=0.443  Sum_probs=35.3

Q ss_pred             eeeeeEEEEcCEEEEecCCccchHHHHHHHHHHHHHHhhc
Q 008640          466 ILPIQILQVGQLVILSVPGEFTTMAGRRLRDAVKTVVTTT  505 (558)
Q Consensus       466 ~~~vq~~riG~l~i~~~P~E~tt~~G~rlr~~~~~~~~~~  505 (558)
                      ...+.+.+-.+..|+.+.|+++.....++++.+...+...
T Consensus         3 ~~~~~~~~~~~~~vv~l~G~l~~~~~~~~~~~l~~~~~~~   42 (110)
T d1vc1a_           3 NLKLDIVEQDDKAIVRVQGDIDAYNSSELKEQLRNFISTT   42 (110)
T ss_dssp             CCEEEEEEETTEEEEEEESCBSTTTHHHHHHHHHHHHHHC
T ss_pred             CcEEEEEEECCEEEEEEEEEEEhHHHHHHHHHHHHHHhcC
Confidence            3578889999999999999999999999999999877653


No 2  
>d1ko3a_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomonas aeruginosa, VIM-2 [TaxId: 287]}
Probab=42.66  E-value=18  Score=31.27  Aligned_cols=48  Identities=13%  Similarity=0.265  Sum_probs=30.5

Q ss_pred             EEEEEEcCCCCEEEEEEeccCcccHHHHHHHHHHHHHHhCCCCCCCcEEEEecccCC
Q 008640           21 RTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHA   77 (558)
Q Consensus        21 RAlvl~~g~~~rva~Vs~Dl~~i~~~l~~~Vr~~l~~~~G~~i~~enIlIsATHTHS   77 (558)
                      .+++|+++  +.  +|-+|... ......++.+.+.+..|  .+...|  -.||.|.
T Consensus        39 N~~li~~~--~~--~vLID~g~-~~~~~~~~~~~i~~~~~--~~i~~i--i~TH~H~   86 (230)
T d1ko3a_          39 NGLIVRDG--DE--LLLIDTAW-GAKNTAALLAEIEKQIG--LPVTRA--VSTHFHD   86 (230)
T ss_dssp             EEEEEEET--TE--EEEESCCS-SHHHHHHHHHHHHTTTC--CCEEEE--ECSSSSH
T ss_pred             EEEEEEeC--CE--EEEECCCC-CHHHHHHHHHHHHHhcC--CeeEEE--EECCCCc
Confidence            46677663  33  45567653 55567777888877667  555444  4799984


No 3  
>d2gmna1 d.157.1.1 (A:29-292) Zn metallo-beta-lactamase {Bradyrhizobium japonicum [TaxId: 375]}
Probab=36.73  E-value=23  Score=31.75  Aligned_cols=53  Identities=11%  Similarity=0.310  Sum_probs=34.5

Q ss_pred             cceEE------EEEEEEcCCCCEEEEEEeccCcccHHHHHHHHHHHHHHhCCCCCCCcE-EEEecccCC
Q 008640           16 FRLRA------RTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNV-AISGIHTHA   77 (558)
Q Consensus        16 D~L~A------RAlvl~~g~~~rva~Vs~Dl~~i~~~l~~~Vr~~l~~~~G~~i~~enI-lIsATHTHS   77 (558)
                      |.+|-      -+++|..+  +.+++  +|... + .....+.+.|++ .|  ++...| .|-.||.|.
T Consensus        17 ~~vy~vg~~~~n~~lI~~~--~~~vL--IDtG~-~-~~~~~~~~~i~~-~~--~~~~~I~~ii~TH~H~   76 (264)
T d2gmna1          17 DNIYYVGTDGIAVYVIKTS--QGLIL--MDTAM-P-QSTGMIKDNIAK-LG--FKVADIKLILNTHAHL   76 (264)
T ss_dssp             TTEEECCCSSSCCEEEEET--TEEEE--ECCCC-G-GGHHHHHHHHHH-TT--CCGGGEEEEECSCCSH
T ss_pred             CCEEEECCCCeEEEEEEEC--CEEEE--EcCCC-c-chHHHHHHHHHH-cC--CCchheEEEEECCCCc
Confidence            66663      45667663  34433  68654 2 235678888876 67  777766 778899984


No 4  
>d2aioa1 d.157.1.1 (A:23-311) Zn metallo-beta-lactamase {Xanthomonas maltophilia [TaxId: 40324]}
Probab=35.23  E-value=18  Score=32.53  Aligned_cols=56  Identities=27%  Similarity=0.386  Sum_probs=35.7

Q ss_pred             eeecceE------EEEEEEEcCCCCEEEEEEeccCcccHHHHHHHHHHHHHHhCCCCCCCcE-EEEecccCC
Q 008640           13 GIHFRLR------ARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNV-AISGIHTHA   77 (558)
Q Consensus        13 GvhD~L~------ARAlvl~~g~~~rva~Vs~Dl~~i~~~l~~~Vr~~l~~~~G~~i~~enI-lIsATHTHS   77 (558)
                      .|.|.+|      +-+++|+.+  +..++  +|... + ...+.+++.|++ .|  ++...| .|-.||.|.
T Consensus        24 ~i~~~vy~vg~~~~~~yli~~~--~g~vL--IDtG~-~-~~~~~~~~~l~~-~G--~~~~~I~~Ii~TH~H~   86 (266)
T d2aioa1          24 QIADHTWQIGTEDLTALLVQTP--DGAVL--LDGGM-P-QMASHLLDNMKA-RG--VTPRDLRLILLSHAHA   86 (266)
T ss_dssp             EEETTEEECSBSSSCCEEEEET--TEEEE--ECCBS-G-GGHHHHHHHHHH-TT--CCGGGEEEEECSCCSH
T ss_pred             EEECCEEEECCCCcEEEEEEeC--CEEEE--EeCCC-c-hhhHHHHHHHHH-cC--CChHHeEEEEecCCCc
Confidence            4555555      357788773  44444  48643 2 345778888877 77  776666 455699997


No 5  
>d1hfoa_ d.80.1.3 (A:) Microphage migration inhibition factor (MIF) {Trichinella spiralis [TaxId: 6334]}
Probab=34.28  E-value=24  Score=28.11  Aligned_cols=42  Identities=17%  Similarity=0.179  Sum_probs=33.7

Q ss_pred             CCCEEEEEEeccCc-ccHH----HHHHHHHHHHHHhCCCCCCCcEEEEe
Q 008640           29 QGNRVVFVNLDACM-ASQI----VKIKVIERLKARYGDLYTEKNVAISG   72 (558)
Q Consensus        29 ~~~rva~Vs~Dl~~-i~~~----l~~~Vr~~l~~~~G~~i~~enIlIsA   72 (558)
                      +.++.++|.+=.++ +.++    +..++-+.|++++|  |+.++|+|.-
T Consensus        52 s~eP~a~~~l~sig~l~~~~n~~~s~~i~~~l~~~Lg--I~~~RiyI~f   98 (113)
T d1hfoa_          52 STNPAAFGTLMSIGGIEPSRNRDHSAKLFDHLNTKLG--IPKNRMYIHF   98 (113)
T ss_dssp             BCSSCEEEEEEESSSCSHHHHHHHHHHHHHHHHHHHC--CCGGGEEEEE
T ss_pred             CCCcEEEEEEEEecCCChHHhHHHHHHHHHHHHHHcC--CCcceEEEEE
Confidence            46788999887775 6665    56777778899999  9999999964


No 6  
>d1uiza_ d.80.1.3 (A:) Microphage migration inhibition factor (MIF) {African clawed frog (Xenopus laevis) [TaxId: 8355]}
Probab=31.49  E-value=28  Score=27.74  Aligned_cols=47  Identities=9%  Similarity=0.016  Sum_probs=35.8

Q ss_pred             EEEEcCCCCEEEEEEeccCc-ccHH----HHHHHHHHHHHHhCCCCCCCcEEEEe
Q 008640           23 FIVAEPQGNRVVFVNLDACM-ASQI----VKIKVIERLKARYGDLYTEKNVAISG   72 (558)
Q Consensus        23 lvl~~g~~~rva~Vs~Dl~~-i~~~----l~~~Vr~~l~~~~G~~i~~enIlIsA   72 (558)
                      +.+.. +.++.++|.+=.++ +.++    +..++-+.|.+.+|  |+.++|+|.-
T Consensus        48 m~fgg-s~~P~a~~~v~siG~l~~~~n~~~s~~i~~~l~~~Lg--I~~~Riyi~f   99 (115)
T d1uiza_          48 MSFGD-STDPCAVCSLCSIGKIGGPQNKSYTKLLCDILTKQLN--IPANRVYINY   99 (115)
T ss_dssp             EEETT-BCSSCEEEEEEESSCCSHHHHHHHHHHHHHHHHHHHC--CCGGGEEEEE
T ss_pred             EEeCC-CCCcEEEEEEEEEcCCChhhhHHHHHHHHHHHHHHcC--CCcceEEEEE
Confidence            34433 46788888888775 6554    67788888899999  9999999964


No 7  
>d1th8b_ c.13.2.1 (B:) Anti-sigma factor antagonist SpoIIaa {Bacillus stearothermophilus [TaxId: 1422]}
Probab=31.07  E-value=46  Score=25.51  Aligned_cols=38  Identities=24%  Similarity=0.441  Sum_probs=33.4

Q ss_pred             eeeeEEEEcCEEEEecCCccchHHHHHHHHHHHHHHhh
Q 008640          467 LPIQILQVGQLVILSVPGEFTTMAGRRLRDAVKTVVTT  504 (558)
Q Consensus       467 ~~vq~~riG~l~i~~~P~E~tt~~G~rlr~~~~~~~~~  504 (558)
                      +.+++-.-+++.|+.+.|+++......+++.+.+.+..
T Consensus         2 l~i~~~~~~~v~vv~l~G~L~~~~~~~~~~~l~~~~~~   39 (115)
T d1th8b_           2 LAIDLEVKQDVLIVRLSGELDHHTAEELREQVTDVLEN   39 (115)
T ss_dssp             EEEEEEEETTEEEEEEEEEESHHHHHHHHHHHHHHHHS
T ss_pred             ceEEEEEECCEEEEEEEEEEEHHHHHHHHHHHHHHHhc
Confidence            46777788999999999999999999999999887754


No 8  
>d1x8ha_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Aeromonas hydrophila, CphA [TaxId: 644]}
Probab=29.45  E-value=25  Score=30.47  Aligned_cols=48  Identities=8%  Similarity=0.003  Sum_probs=28.2

Q ss_pred             EEEEEEcCCCCEEEEEEeccCcccHHHHHHHHHHHHHHhCCCCCCCcEEEEecccCC
Q 008640           21 RTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHA   77 (558)
Q Consensus        21 RAlvl~~g~~~rva~Vs~Dl~~i~~~l~~~Vr~~l~~~~G~~i~~enIlIsATHTHS   77 (558)
                      .++++..  ++.++  .+|.. +.....+++.+.|++..+  -+..  .|-.||.|.
T Consensus        24 N~~~i~~--~~g~v--lID~g-~~~~~~~~l~~~i~~~~~--~~i~--~ii~TH~H~   71 (228)
T d1x8ha_          24 NSMVYFG--AKGVT--VVGAT-WTPDTARELHKLIKRVSR--KPVL--EVINTNYHT   71 (228)
T ss_dssp             EEEEEEC--SSCEE--EESCC-SSHHHHHHHHHHHHTTCC--SCEE--EEECSSSSH
T ss_pred             eEEEEEE--CCEEE--EEeCC-CCHHHHHHHHHHHHHhcC--CCce--EEEECCCCc
Confidence            3566654  33344  35865 456667888888877333  2322  345689886


No 9  
>d2gdga1 d.80.1.3 (A:1-114) Microphage migration inhibition factor (MIF) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=28.31  E-value=34  Score=27.16  Aligned_cols=42  Identities=12%  Similarity=0.052  Sum_probs=33.5

Q ss_pred             CCCEEEEEEeccCc-ccHH----HHHHHHHHHHHHhCCCCCCCcEEEEe
Q 008640           29 QGNRVVFVNLDACM-ASQI----VKIKVIERLKARYGDLYTEKNVAISG   72 (558)
Q Consensus        29 ~~~rva~Vs~Dl~~-i~~~----l~~~Vr~~l~~~~G~~i~~enIlIsA   72 (558)
                      +.++.++|.+=.++ +.++    +..++.+.|++++|  |+.++|+|.-
T Consensus        52 s~~P~a~~~l~siG~~~~~~n~~~s~~i~~~l~~~Lg--I~~~RiyI~f   98 (114)
T d2gdga1          52 TNDPCALCSLHSIGKIGGAQNRNYSKLLCGLLSDRLH--ISPDRVYINY   98 (114)
T ss_dssp             BCSSCEEEEEEESSCCSHHHHHHHHHHHHHHHHHHHC--CCGGGEEEEE
T ss_pred             CCCCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhC--CCcceEEEEE
Confidence            46788998887775 5544    67788888899999  9999999964


No 10 
>d1mwwa_ d.80.1.4 (A:) Hypothetical protein HI1388.1 {Haemophilus influenzae [TaxId: 727]}
Probab=26.57  E-value=34  Score=27.16  Aligned_cols=45  Identities=9%  Similarity=0.169  Sum_probs=35.0

Q ss_pred             CCCEEEEEEeccCc-cc----HHHHHHHHHHHHHHhCCCCCCCcEEEEeccc
Q 008640           29 QGNRVVFVNLDACM-AS----QIVKIKVIERLKARYGDLYTEKNVAISGIHT   75 (558)
Q Consensus        29 ~~~rva~Vs~Dl~~-i~----~~l~~~Vr~~l~~~~G~~i~~enIlIsATHT   75 (558)
                      ....+++|.+++.. -+    ..+...+.+.|.+.+|  ++.++|+|.-+=+
T Consensus        55 rs~~~~~I~i~~~~grs~eqK~~l~~~lt~~l~~~lg--i~~~~v~I~i~e~  104 (120)
T d1mwwa_          55 RSDDYTVIEINLMAGRMEGTKKRLIKMLFSELEYKLG--IRAHDVEITIKEQ  104 (120)
T ss_dssp             SCTTCEEEEEEEETTCCHHHHHHHHHHHHHHHHHHHC--CCGGGEEEEEEEE
T ss_pred             CCCCEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhC--cCcCeEEEEEEEC
Confidence            35678999999775 44    4567777788888899  9999999987644


No 11 
>d1p9ea_ d.157.1.5 (A:) Methyl parathion hydrolase {Pseudomonas sp. WBC-3 [TaxId: 165468]}
Probab=23.64  E-value=17  Score=33.31  Aligned_cols=54  Identities=24%  Similarity=0.265  Sum_probs=35.3

Q ss_pred             ceEEEEEEEEcCCCCEEEEEEeccCccc--HHHHHHHHHHHHHHhCCCCCCCcE-EEEecccCC
Q 008640           17 RLRARTFIVAEPQGNRVVFVNLDACMAS--QIVKIKVIERLKARYGDLYTEKNV-AISGIHTHA   77 (558)
Q Consensus        17 ~L~ARAlvl~~g~~~rva~Vs~Dl~~i~--~~l~~~Vr~~l~~~~G~~i~~enI-lIsATHTHS   77 (558)
                      ++-+.+++|+.+ ++.   |-+|...-.  .....++.+.|++ .|  ++++.| .|-.||.|.
T Consensus        59 ~~~vn~~LI~~~-~~~---iLiDtG~g~~~~~~~~~l~~~L~~-~G--i~p~dI~~VilTH~H~  115 (294)
T d1p9ea_          59 ETSVTGYLVNTG-SKL---VLVDTGAAGLFGPTLGRLAANLKA-AG--YQPEQVDEIYITHMHP  115 (294)
T ss_dssp             EEEEEEEEEECS-SCE---EEECCCCTTSSCTTCCCHHHHHHH-TT--CCGGGCCEEECSCCCH
T ss_pred             eeeeEEEEEEEC-CeE---EEEECCCCcccCccHHHHHHHHHH-cC--CCHHHCcEEECCCCCc
Confidence            356789999885 443   345776532  1122346667766 88  888877 677899996


No 12 
>d1dpta_ d.80.1.3 (A:) D-dopachrome tautomerase {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.39  E-value=42  Score=26.67  Aligned_cols=42  Identities=7%  Similarity=0.042  Sum_probs=32.5

Q ss_pred             CCCEEEEEEeccCc--ccH----HHHHHHHHHHHHHhCCCCCCCcEEEEe
Q 008640           29 QGNRVVFVNLDACM--ASQ----IVKIKVIERLKARYGDLYTEKNVAISG   72 (558)
Q Consensus        29 ~~~rva~Vs~Dl~~--i~~----~l~~~Vr~~l~~~~G~~i~~enIlIsA   72 (558)
                      +.++.+++.+=.++  .++    .+...+.+.|++.+|  |+.++|+|.-
T Consensus        52 s~eP~a~~~l~sig~~~~~e~n~~~s~~i~~~l~~~Lg--I~~~RiyI~f   99 (117)
T d1dpta_          52 STEPCAQLSISSIGVVGTAEDNRSHSAHFFEFLTKELA--LGQDRILIRF   99 (117)
T ss_dssp             BCSSCEEEEEEEESSSCSHHHHHHHHHHHHHHHHHHHT--CCGGGEEEEE
T ss_pred             CCCcEEEEEEEEecCCCcHHHHHHHHHHHHHHHHHHcC--CCcCeEEEEE
Confidence            45678888777654  333    467888888899999  9999999964


No 13 
>d1mqoa_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacillus cereus [TaxId: 1396]}
Probab=22.15  E-value=74  Score=27.28  Aligned_cols=49  Identities=14%  Similarity=0.246  Sum_probs=32.8

Q ss_pred             EEEEEEEcCCCCEEEEEEeccCcccHHHHHHHHHHHHHHhCCCCCCCcEEEEecccCC
Q 008640           20 ARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHA   77 (558)
Q Consensus        20 ARAlvl~~g~~~rva~Vs~Dl~~i~~~l~~~Vr~~l~~~~G~~i~~enIlIsATHTHS   77 (558)
                      +.++++..+  +.+  |-+|. ++.....+++.+.|++.++  -+.  -.|-.||.|.
T Consensus        35 ~N~~li~~~--~~~--iLIDt-~~~~~~~~~l~~~i~~~~~--~pi--~~vi~TH~H~   83 (221)
T d1mqoa_          35 SNGLVLNTS--KGL--VLVDS-SWDDKLTKELIEMVEKKFQ--KRV--TDVIITHAHA   83 (221)
T ss_dssp             EEEEEEEET--TEE--EEESC-CSSHHHHHHHHHHHHHHHT--SCE--EEEECCCCSH
T ss_pred             cEEEEEEEC--CEE--EEEeC-CCCHHHHHHHHHHHHHhcC--CCc--eEEEECCCCc
Confidence            566777763  333  55676 4566777888888888777  443  3466788885


No 14 
>d1yx0a1 d.108.1.1 (A:1-151) Hypothetical protein YsnE {Bacillus subtilis [TaxId: 1423]}
Probab=21.53  E-value=58  Score=26.81  Aligned_cols=54  Identities=15%  Similarity=0.049  Sum_probs=39.9

Q ss_pred             CCCeeEEEEEEeCCCCeEEEEEeeeccccccCCCCccccCCc--HHHHHHHHHHHhh
Q 008640          157 VDKEMTLLKFVDDQWGPVGSFNWFATHGTSMSRTNSLISGDN--KGAAARFMEDWFE  211 (558)
Q Consensus       157 vD~~l~vL~f~~~dG~pia~L~nyA~HpT~l~~~n~lISaD~--~G~a~~~lE~~~~  211 (558)
                      .+|+..++-+++ +|+++|.+...-.......-....+.++|  .|..+++++....
T Consensus        42 ~~~~~~~~va~~-~~~~vG~~~~~~~~~~~~~i~~~~V~p~~Rg~Glg~~Ll~~~~~   97 (151)
T d1yx0a1          42 RGPEITFWSAWE-GDELAGCGALKELDTRHGEIKSMRTSASHLRKGVAKQVLQHIIE   97 (151)
T ss_dssp             SSSSCEEEEEEC-SSSEEEEEEEEEEETTEEECCCCCCSTTTCCSCHHHHHHHHHHH
T ss_pred             cCCCeEEEEEEE-CCEEEEEEEEEeccCceEEEEeeeeCHHHHhCChhHHHHHHHHH
Confidence            356667766666 69999988766555555555667899997  8999999988754


No 15 
>d1lf7a_ b.60.1.1 (A:) Complement protein C8gamma {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.72  E-value=98  Score=24.89  Aligned_cols=51  Identities=14%  Similarity=0.017  Sum_probs=39.7

Q ss_pred             EcCCCCEEEEEEeccCcccHHHHHHHHHHHHHHhCCCCCCCcEEEEecccCCCCC
Q 008640           26 AEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHAGPG   80 (558)
Q Consensus        26 ~~g~~~rva~Vs~Dl~~i~~~l~~~Vr~~l~~~~G~~i~~enIlIsATHTHSgP~   80 (558)
                      ..+ ..+.+++-.=-.-++.++.+++++.+++ .|  |+.++|++....-...|+
T Consensus       112 ~~~-~~~~~~llsR~p~~~~~~~~~f~~~~~~-~G--~~~~~i~~~~~~~~C~~~  162 (171)
T d1lf7a_         112 ERA-GQLSVKLYARSLPVSDSVLSGFEQRVQE-AH--LTEDQIFYFPKYGFCEAA  162 (171)
T ss_dssp             EET-TEEEEEEEESSSSCCHHHHHHHHHHHHH-TT--CCGGGEEECCSSCCCCCC
T ss_pred             eCC-CcEEEEEEECCCCCCHHHHHHHHHHHHH-cC--CCHHHEEECCCCCccCCc
Confidence            443 6777888888888899999999888876 89  999999998644444444


Done!