Query 008641
Match_columns 558
No_of_seqs 583 out of 3841
Neff 9.0
Searched_HMMs 46136
Date Thu Mar 28 14:44:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008641.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008641hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02833 glycerol acyltransfer 100.0 2.3E-35 5E-40 297.7 28.3 217 147-376 136-355 (376)
2 cd07991 LPLAT_LPCAT1-like Lyso 100.0 6.8E-36 1.5E-40 283.9 18.5 207 153-360 2-210 (211)
3 KOG4666 Predicted phosphate ac 100.0 5.9E-36 1.3E-40 279.8 17.5 362 178-544 9-374 (412)
4 KOG2848 1-acyl-sn-glycerol-3-p 100.0 8.1E-34 1.7E-38 259.5 21.7 195 146-354 60-261 (276)
5 PRK15018 1-acyl-sn-glycerol-3- 100.0 1.1E-31 2.4E-36 258.5 21.9 187 148-351 39-232 (245)
6 PTZ00261 acyltransferase; Prov 99.9 9.2E-26 2E-30 221.7 19.2 166 172-353 126-312 (355)
7 PLN02901 1-acyl-sn-glycerol-3- 99.9 3.1E-25 6.7E-30 210.9 18.2 185 145-349 20-211 (214)
8 PLN02177 glycerol-3-phosphate 99.9 3.1E-24 6.7E-29 225.0 22.3 202 151-365 274-484 (497)
9 PLN02499 glycerol-3-phosphate 99.9 4.6E-24 1E-28 217.7 21.6 199 154-365 264-471 (498)
10 PRK14014 putative acyltransfer 99.9 1.9E-23 4.2E-28 207.0 23.7 184 153-347 65-282 (301)
11 PLN02588 glycerol-3-phosphate 99.9 4.2E-24 9.1E-29 216.9 17.6 194 155-364 305-515 (525)
12 cd07988 LPLAT_ABO13168-like Ly 99.9 2E-24 4.3E-29 195.9 9.3 139 154-328 3-150 (163)
13 COG5126 FRQ1 Ca2+-binding prot 99.9 5E-23 1.1E-27 180.3 16.6 146 386-532 10-159 (160)
14 cd07992 LPLAT_AAK14816-like Ly 99.9 3.2E-23 7E-28 195.9 15.5 174 151-346 4-200 (203)
15 COG0204 PlsC 1-acyl-sn-glycero 99.9 1.6E-22 3.5E-27 198.6 18.6 176 146-342 35-221 (255)
16 PLN02783 diacylglycerol O-acyl 99.9 1.4E-22 3.1E-27 201.7 16.7 201 146-360 72-310 (315)
17 cd07993 LPLAT_DHAPAT-like Lyso 99.9 5.8E-23 1.3E-27 194.2 10.5 150 175-326 22-201 (205)
18 cd07986 LPLAT_ACT14924-like Ly 99.9 2.3E-22 5.1E-27 190.8 12.2 174 163-343 9-208 (210)
19 PRK08043 bifunctional acyl-[ac 99.9 5.6E-21 1.2E-25 215.1 18.4 187 163-363 15-212 (718)
20 KOG0027 Calmodulin and related 99.9 1.4E-20 3E-25 169.0 16.3 141 390-530 2-150 (151)
21 PLN02510 probable 1-acyl-sn-gl 99.8 1.3E-19 2.7E-24 183.4 18.6 128 155-284 73-208 (374)
22 PRK08633 2-acyl-glycerophospho 99.8 3.4E-19 7.4E-24 211.4 24.3 169 163-344 428-603 (1146)
23 PRK03355 glycerol-3-phosphate 99.8 4.5E-20 9.8E-25 200.3 15.1 178 172-352 264-487 (783)
24 PRK06814 acylglycerophosphoeth 99.8 1.2E-19 2.5E-24 215.0 20.0 172 163-348 440-623 (1140)
25 PLN02380 1-acyl-sn-glycerol-3- 99.8 9E-19 2E-23 177.1 21.8 109 155-265 61-181 (376)
26 KOG0028 Ca2+-binding protein ( 99.8 4.9E-19 1.1E-23 150.8 16.0 147 384-530 21-171 (172)
27 cd07987 LPLAT_MGAT-like Lysoph 99.8 5.8E-20 1.3E-24 175.1 10.1 172 165-348 9-207 (212)
28 PTZ00183 centrin; Provisional 99.8 1.1E-18 2.5E-23 158.2 17.4 146 387-532 8-157 (158)
29 TIGR00530 AGP_acyltrn 1-acyl-s 99.8 4.6E-19 9.9E-24 155.3 10.9 119 164-284 4-129 (130)
30 KOG0034 Ca2+/calmodulin-depend 99.8 3.8E-18 8.2E-23 155.2 16.4 149 390-538 27-184 (187)
31 PTZ00184 calmodulin; Provision 99.8 8.5E-18 1.8E-22 150.7 16.8 141 389-529 4-148 (149)
32 PF01553 Acyltransferase: Acyl 99.8 1.8E-20 3.9E-25 164.6 -1.3 120 164-285 2-132 (132)
33 TIGR03703 plsB glycerol-3-phos 99.8 1.4E-17 3E-22 182.8 18.9 161 164-328 276-472 (799)
34 cd07985 LPLAT_GPAT Lysophospho 99.8 5.5E-18 1.2E-22 158.1 13.4 172 172-350 19-234 (235)
35 cd06551 LPLAT Lysophospholipid 99.8 1.8E-17 3.8E-22 154.8 16.0 163 160-348 10-186 (187)
36 PRK04974 glycerol-3-phosphate 99.8 5.4E-18 1.2E-22 186.0 14.3 187 164-352 286-528 (818)
37 cd07983 LPLAT_DUF374-like Lyso 99.7 2.6E-17 5.6E-22 153.9 13.2 170 162-348 8-187 (189)
38 PTZ00374 dihydroxyacetone phos 99.7 3.6E-17 7.8E-22 176.8 14.3 154 172-327 626-812 (1108)
39 KOG0044 Ca2+ sensor (EF-Hand s 99.7 1.2E-16 2.7E-21 145.2 14.2 158 381-541 14-187 (193)
40 KOG0031 Myosin regulatory ligh 99.7 3.8E-16 8.3E-21 132.1 15.7 136 389-528 25-164 (171)
41 smart00563 PlsC Phosphate acyl 99.7 3.4E-17 7.5E-22 140.5 9.7 108 177-286 1-117 (118)
42 cd07989 LPLAT_AGPAT-like Lysop 99.7 6E-17 1.3E-21 150.9 12.1 154 159-327 8-168 (184)
43 cd07990 LPLAT_LCLAT1-like Lyso 99.7 1.6E-17 3.5E-22 155.7 7.8 125 158-284 7-140 (193)
44 KOG0030 Myosin essential light 99.7 4.6E-16 9.9E-21 129.4 12.3 139 389-528 4-150 (152)
45 KOG2898 Predicted phosphate ac 99.7 1.9E-16 4E-21 155.9 9.6 251 94-356 64-320 (354)
46 PRK11915 glycerol-3-phosphate 99.6 2.5E-15 5.5E-20 158.5 14.6 180 172-353 112-331 (621)
47 KOG0037 Ca2+-binding protein, 99.6 6.5E-15 1.4E-19 133.0 14.3 138 395-539 56-198 (221)
48 KOG0036 Predicted mitochondria 99.5 2.4E-13 5.3E-18 133.0 15.1 138 389-532 7-149 (463)
49 KOG1505 Lysophosphatidic acid 99.5 5.7E-13 1.2E-17 133.2 12.6 125 166-292 63-221 (346)
50 KOG0038 Ca2+-binding kinase in 99.5 2.4E-12 5.1E-17 107.9 14.1 159 381-539 13-187 (189)
51 cd07984 LPLAT_LABLAT-like Lyso 99.4 9.8E-13 2.1E-17 123.3 12.4 159 164-357 4-186 (192)
52 KOG2847 Phosphate acyltransfer 99.4 1E-12 2.3E-17 120.4 10.5 162 157-327 43-226 (286)
53 KOG0027 Calmodulin and related 99.3 3E-11 6.5E-16 108.4 11.0 103 429-532 9-116 (151)
54 KOG4223 Reticulocalbin, calume 99.2 5.7E-11 1.2E-15 113.8 10.3 130 395-524 162-300 (325)
55 PLN02964 phosphatidylserine de 99.2 1.7E-10 3.6E-15 123.8 14.5 118 388-507 135-271 (644)
56 COG5126 FRQ1 Ca2+-binding prot 99.2 3.5E-10 7.5E-15 99.6 12.0 101 429-531 21-122 (160)
57 cd05022 S-100A13 S-100A13: S-1 99.1 1.6E-10 3.5E-15 92.5 7.2 67 464-530 7-76 (89)
58 PF13499 EF-hand_7: EF-hand do 99.1 2.2E-10 4.7E-15 87.2 7.6 62 466-527 1-66 (66)
59 PTZ00183 centrin; Provisional 99.1 1.3E-09 2.8E-14 98.5 12.2 101 429-530 18-119 (158)
60 KOG0037 Ca2+-binding protein, 99.1 2.6E-09 5.7E-14 97.0 12.8 124 395-527 93-218 (221)
61 KOG4223 Reticulocalbin, calume 99.0 1.1E-09 2.3E-14 105.1 10.7 138 394-531 75-230 (325)
62 KOG0044 Ca2+ sensor (EF-Hand s 99.0 1.8E-09 3.8E-14 98.6 11.4 115 379-493 47-175 (193)
63 KOG0028 Ca2+-binding protein ( 99.0 2.1E-09 4.5E-14 92.4 10.5 103 429-532 34-137 (172)
64 PTZ00184 calmodulin; Provision 99.0 3.2E-09 7E-14 94.8 12.2 100 429-529 12-112 (149)
65 PLN02964 phosphatidylserine de 99.0 1.3E-09 2.8E-14 117.0 10.3 100 428-531 143-245 (644)
66 cd05027 S-100B S-100B: S-100B 99.0 2E-09 4.2E-14 86.5 8.1 66 465-530 8-80 (88)
67 COG2937 PlsB Glycerol-3-phosph 98.9 3.1E-09 6.6E-14 111.3 9.0 180 172-355 293-525 (810)
68 KOG0377 Protein serine/threoni 98.9 1.2E-08 2.6E-13 100.9 11.5 133 395-529 463-615 (631)
69 cd05029 S-100A6 S-100A6: S-100 98.9 7.7E-09 1.7E-13 83.0 7.8 66 465-530 10-80 (88)
70 cd05026 S-100Z S-100Z: S-100Z 98.8 1.1E-08 2.4E-13 83.2 8.0 66 465-530 10-82 (93)
71 cd05031 S-100A10_like S-100A10 98.8 1.4E-08 3E-13 83.1 7.9 69 464-532 7-82 (94)
72 KOG3729 Mitochondrial glycerol 98.8 1.9E-08 4.2E-13 101.7 10.2 152 174-327 157-344 (715)
73 PF13833 EF-hand_8: EF-hand do 98.8 1.6E-08 3.4E-13 73.5 6.9 52 478-529 1-53 (54)
74 cd05025 S-100A1 S-100A1: S-100 98.8 2.1E-08 4.4E-13 81.8 8.1 67 464-530 8-81 (92)
75 cd00052 EH Eps15 homology doma 98.7 2.7E-08 5.9E-13 75.7 6.8 61 468-530 2-62 (67)
76 KOG2643 Ca2+ binding protein, 98.7 4.2E-08 9.1E-13 97.4 9.1 130 395-530 317-454 (489)
77 smart00027 EH Eps15 homology d 98.7 5.3E-08 1.1E-12 80.0 7.9 65 464-530 9-73 (96)
78 cd05023 S-100A11 S-100A11: S-1 98.7 6.1E-08 1.3E-12 77.9 7.9 67 464-530 8-81 (89)
79 PF13499 EF-hand_7: EF-hand do 98.7 5.8E-08 1.2E-12 73.8 6.9 56 398-453 2-65 (66)
80 KOG0034 Ca2+/calmodulin-depend 98.7 7.8E-08 1.7E-12 87.9 8.5 96 399-494 69-176 (187)
81 cd00213 S-100 S-100: S-100 dom 98.7 7.3E-08 1.6E-12 77.8 7.5 67 464-530 7-80 (88)
82 cd00051 EFh EF-hand, calcium b 98.7 9E-08 1.9E-12 71.1 7.2 61 467-527 2-62 (63)
83 KOG3730 Acyl-CoA:dihydroxyacte 98.6 2.7E-07 5.9E-12 92.2 11.3 152 172-325 147-330 (685)
84 cd00252 SPARC_EC SPARC_EC; ext 98.6 1.5E-07 3.1E-12 79.4 7.5 62 464-529 47-108 (116)
85 cd05022 S-100A13 S-100A13: S-1 98.6 1.5E-07 3.3E-12 75.4 7.2 66 393-458 5-77 (89)
86 smart00027 EH Eps15 homology d 98.6 1.6E-07 3.5E-12 77.1 7.4 70 389-458 3-74 (96)
87 cd05026 S-100Z S-100Z: S-100Z 98.5 2.8E-07 6E-12 75.0 7.1 66 393-458 7-83 (93)
88 KOG2562 Protein phosphatase 2 98.5 1.5E-06 3.3E-11 87.3 13.1 135 390-525 272-420 (493)
89 KOG4666 Predicted phosphate ac 98.5 2.4E-09 5.1E-14 101.9 -6.7 227 136-363 122-376 (412)
90 KOG0036 Predicted mitochondria 98.5 9.1E-07 2E-11 87.5 10.6 98 429-531 15-112 (463)
91 cd05030 calgranulins Calgranul 98.4 5.4E-07 1.2E-11 72.5 6.8 66 465-530 8-80 (88)
92 cd05029 S-100A6 S-100A6: S-100 98.4 9.2E-07 2E-11 71.0 7.8 66 392-457 6-80 (88)
93 PF14658 EF-hand_9: EF-hand do 98.4 1.1E-06 2.3E-11 65.0 7.0 61 469-529 2-64 (66)
94 cd05025 S-100A1 S-100A1: S-100 98.4 9.8E-07 2.1E-11 71.8 7.3 65 394-458 7-82 (92)
95 cd05027 S-100B S-100B: S-100B 98.4 1.6E-06 3.5E-11 69.6 7.9 65 393-457 5-80 (88)
96 KOG2643 Ca2+ binding protein, 98.4 1.8E-06 4E-11 86.0 9.7 137 396-538 233-396 (489)
97 cd00052 EH Eps15 homology doma 98.3 1.2E-06 2.6E-11 66.5 6.2 58 399-456 2-61 (67)
98 cd00213 S-100 S-100: S-100 dom 98.3 1.5E-06 3.3E-11 70.1 7.1 66 392-457 4-80 (88)
99 cd05023 S-100A11 S-100A11: S-1 98.3 1.8E-06 4E-11 69.4 7.2 66 393-458 6-82 (89)
100 KOG4251 Calcium binding protei 98.3 1.5E-06 3.2E-11 79.9 7.4 135 393-527 98-262 (362)
101 PRK08419 lipid A biosynthesis 98.3 2E-05 4.3E-10 79.1 16.4 163 164-359 97-285 (298)
102 cd05031 S-100A10_like S-100A10 98.3 2.1E-06 4.6E-11 70.2 7.4 63 395-457 7-80 (94)
103 cd00252 SPARC_EC SPARC_EC; ext 98.3 2.2E-06 4.7E-11 72.3 7.5 63 391-454 43-106 (116)
104 KOG0751 Mitochondrial aspartat 98.3 2.5E-06 5.5E-11 85.8 9.1 135 393-530 33-208 (694)
105 KOG0030 Myosin essential light 98.3 5.6E-06 1.2E-10 69.7 9.6 104 428-532 11-119 (152)
106 KOG0041 Predicted Ca2+-binding 98.2 4E-06 8.6E-11 74.9 8.2 66 464-529 98-163 (244)
107 PF00036 EF-hand_1: EF hand; 98.2 2E-06 4.3E-11 53.2 4.1 28 502-529 1-28 (29)
108 COG2121 Uncharacterized protei 98.2 7.8E-05 1.7E-09 67.6 15.3 154 174-343 45-203 (214)
109 KOG0041 Predicted Ca2+-binding 98.2 8.9E-06 1.9E-10 72.7 8.4 102 389-490 92-200 (244)
110 KOG0040 Ca2+-binding actin-bun 98.1 4.3E-05 9.4E-10 86.0 13.4 134 386-527 2243-2396(2399)
111 PF00036 EF-hand_1: EF hand; 98.1 5.2E-06 1.1E-10 51.3 3.5 27 467-493 2-28 (29)
112 cd00051 EFh EF-hand, calcium b 98.1 1.7E-05 3.6E-10 58.6 7.0 59 431-490 3-61 (63)
113 PF13833 EF-hand_8: EF-hand do 98.1 1.3E-05 2.9E-10 57.9 6.3 51 442-492 2-52 (54)
114 cd05024 S-100A10 S-100A10: A s 98.0 3.1E-05 6.8E-10 61.6 8.2 65 465-530 8-77 (91)
115 PRK07920 lipid A biosynthesis 98.0 0.00042 9.1E-09 69.5 17.9 161 164-356 90-275 (298)
116 KOG0031 Myosin regulatory ligh 98.0 9.4E-05 2E-09 63.6 11.0 98 429-531 33-131 (171)
117 KOG0038 Ca2+-binding kinase in 98.0 3.4E-05 7.4E-10 65.3 7.8 92 403-494 78-178 (189)
118 PRK12309 transaldolase/EF-hand 97.9 5E-05 1.1E-09 77.9 9.8 102 412-529 281-385 (391)
119 cd05030 calgranulins Calgranul 97.9 4.1E-05 8.8E-10 61.6 6.7 65 393-457 5-80 (88)
120 KOG4251 Calcium binding protei 97.8 0.00017 3.8E-09 66.5 10.1 113 413-525 216-341 (362)
121 PF12763 EF-hand_4: Cytoskelet 97.8 0.00012 2.6E-09 60.5 8.2 63 464-529 9-71 (104)
122 PF12763 EF-hand_4: Cytoskelet 97.7 0.0001 2.2E-09 60.8 7.1 68 389-457 3-72 (104)
123 PF14788 EF-hand_10: EF hand; 97.7 0.00012 2.5E-09 51.0 6.0 49 481-529 1-49 (51)
124 cd05024 S-100A10 S-100A10: A s 97.7 0.00019 4.1E-09 57.2 7.9 65 393-458 5-78 (91)
125 PF13405 EF-hand_6: EF-hand do 97.7 4.7E-05 1E-09 48.0 3.5 26 467-492 2-27 (31)
126 PLN02349 glycerol-3-phosphate 97.7 7.6E-05 1.6E-09 74.4 6.1 112 173-285 199-347 (426)
127 PF14658 EF-hand_9: EF-hand do 97.7 0.00017 3.8E-09 53.4 6.5 55 401-455 3-63 (66)
128 PF13202 EF-hand_5: EF hand; P 97.5 0.00016 3.4E-09 43.0 3.6 23 504-526 2-24 (25)
129 PF03279 Lip_A_acyltrans: Bact 97.5 0.011 2.5E-07 59.1 19.2 161 164-357 105-288 (295)
130 KOG0040 Ca2+-binding actin-bun 97.5 0.00052 1.1E-08 77.7 9.8 100 429-529 2254-2361(2399)
131 COG1560 HtrB Lauroyl/myristoyl 97.4 0.0084 1.8E-07 59.8 17.1 164 163-357 106-291 (308)
132 PF13202 EF-hand_5: EF hand; P 97.4 0.00018 3.9E-09 42.7 3.0 23 468-490 2-24 (25)
133 KOG0751 Mitochondrial aspartat 97.3 0.0018 3.9E-08 65.9 11.0 108 396-511 108-225 (694)
134 KOG2562 Protein phosphatase 2 97.3 0.00064 1.4E-08 68.9 7.8 127 397-527 226-377 (493)
135 KOG1029 Endocytic adaptor prot 97.3 0.0018 3.9E-08 69.1 10.6 135 390-527 10-255 (1118)
136 PF13405 EF-hand_6: EF-hand do 97.2 0.00055 1.2E-08 43.1 3.8 28 502-529 1-28 (31)
137 PRK12309 transaldolase/EF-hand 97.1 0.00093 2E-08 68.7 6.7 51 429-493 335-385 (391)
138 PF10591 SPARC_Ca_bdg: Secrete 97.1 0.00023 4.9E-09 60.0 1.7 61 464-526 53-113 (113)
139 PF10591 SPARC_Ca_bdg: Secrete 97.1 0.00067 1.4E-08 57.1 4.3 61 392-452 50-112 (113)
140 PF14788 EF-hand_10: EF hand; 97.0 0.0022 4.7E-08 44.8 5.7 48 445-493 2-49 (51)
141 PRK05646 lipid A biosynthesis 97.0 0.066 1.4E-06 54.0 19.1 160 163-357 106-290 (310)
142 KOG0169 Phosphoinositide-speci 97.0 0.0081 1.8E-07 64.9 12.7 135 390-529 130-274 (746)
143 KOG0377 Protein serine/threoni 97.0 0.0027 5.8E-08 63.8 8.2 66 429-494 548-616 (631)
144 KOG0831 Acyl-CoA:diacylglycero 96.8 0.068 1.5E-06 52.5 16.2 138 199-345 138-310 (334)
145 PF03982 DAGAT: Diacylglycerol 96.8 0.011 2.4E-07 58.7 11.2 146 201-356 102-287 (297)
146 TIGR02207 lipid_A_htrB lipid A 96.8 0.15 3.3E-06 51.2 19.2 162 163-359 103-288 (303)
147 PRK06553 lipid A biosynthesis 96.7 0.15 3.3E-06 51.4 18.8 161 164-357 117-302 (308)
148 KOG0046 Ca2+-binding actin-bun 96.7 0.0038 8.2E-08 64.2 6.8 71 387-458 10-87 (627)
149 PRK06946 lipid A biosynthesis 96.7 0.21 4.6E-06 49.9 19.4 163 163-359 94-279 (293)
150 PRK06860 lipid A biosynthesis 96.7 0.12 2.6E-06 52.1 17.6 162 163-359 109-294 (309)
151 TIGR02208 lipid_A_msbB lipid A 96.6 0.34 7.4E-06 48.7 20.3 162 164-358 106-290 (305)
152 PRK08734 lipid A biosynthesis 96.6 0.36 7.8E-06 48.6 20.2 163 164-359 97-282 (305)
153 KOG4065 Uncharacterized conser 96.5 0.0075 1.6E-07 49.2 6.2 58 469-526 71-142 (144)
154 PRK05906 lipid A biosynthesis 96.5 0.086 1.9E-06 55.6 15.3 154 173-360 138-310 (454)
155 PRK08733 lipid A biosynthesis 96.4 0.3 6.4E-06 49.2 18.4 160 163-359 109-291 (306)
156 PRK08943 lipid A biosynthesis 96.4 0.44 9.6E-06 48.1 19.6 162 164-359 115-300 (314)
157 PRK08706 lipid A biosynthesis 96.4 0.34 7.4E-06 48.3 18.6 161 164-358 90-274 (289)
158 PRK06628 lipid A biosynthesis 96.1 0.65 1.4E-05 46.3 19.1 161 164-357 100-283 (290)
159 KOG0046 Ca2+-binding actin-bun 96.1 0.015 3.2E-07 60.0 6.9 64 465-529 19-85 (627)
160 smart00054 EFh EF-hand, calciu 96.0 0.0098 2.1E-07 35.6 3.4 26 503-528 2-27 (29)
161 PF09279 EF-hand_like: Phospho 95.9 0.021 4.5E-07 45.2 5.8 64 466-530 1-70 (83)
162 PRK08025 lipid A biosynthesis 95.9 1 2.2E-05 45.3 19.4 162 163-359 107-291 (305)
163 PRK08905 lipid A biosynthesis 95.7 1 2.3E-05 44.8 18.2 161 164-358 85-268 (289)
164 PRK05645 lipid A biosynthesis 95.5 0.77 1.7E-05 45.9 16.6 163 164-359 96-281 (295)
165 smart00054 EFh EF-hand, calciu 95.2 0.021 4.5E-07 34.1 2.8 26 467-492 2-27 (29)
166 KOG4065 Uncharacterized conser 95.1 0.07 1.5E-06 43.7 6.1 64 387-452 60-141 (144)
167 KOG0035 Ca2+-binding actin-bun 94.3 0.45 9.8E-06 53.2 12.1 103 386-489 737-848 (890)
168 PF09279 EF-hand_like: Phospho 93.8 0.12 2.5E-06 40.9 4.8 64 429-493 1-69 (83)
169 KOG1955 Ral-GTPase effector RA 93.8 0.12 2.5E-06 53.1 5.8 73 386-458 221-295 (737)
170 KOG3555 Ca2+-binding proteogly 93.7 0.073 1.6E-06 52.2 3.9 94 395-493 210-310 (434)
171 KOG0998 Synaptic vesicle prote 93.5 0.065 1.4E-06 61.0 3.8 136 390-528 123-344 (847)
172 PLN02952 phosphoinositide phos 93.1 0.53 1.1E-05 51.2 9.8 88 441-529 13-110 (599)
173 PF05042 Caleosin: Caleosin re 93.1 1.1 2.3E-05 40.2 10.0 63 464-527 95-164 (174)
174 KOG0169 Phosphoinositide-speci 92.9 0.5 1.1E-05 51.6 9.2 96 429-529 137-232 (746)
175 KOG1707 Predicted Ras related/ 92.8 0.55 1.2E-05 49.9 9.1 148 388-538 187-388 (625)
176 PRK15174 Vi polysaccharide exp 92.4 1.3 2.7E-05 49.8 12.0 148 173-356 477-638 (656)
177 KOG1029 Endocytic adaptor prot 92.3 0.16 3.5E-06 54.8 4.5 67 391-457 190-258 (1118)
178 KOG4578 Uncharacterized conser 91.9 0.13 2.8E-06 50.1 3.0 66 467-532 335-401 (421)
179 KOG1265 Phospholipase C [Lipid 91.7 1.8 4E-05 47.9 11.6 82 444-529 204-299 (1189)
180 KOG0042 Glycerol-3-phosphate d 91.6 0.55 1.2E-05 49.5 7.2 77 386-462 583-663 (680)
181 KOG3555 Ca2+-binding proteogly 91.2 0.42 9.2E-06 47.0 5.7 65 393-457 247-311 (434)
182 COG3176 Putative hemolysin [Ge 90.9 0.29 6.4E-06 47.9 4.4 128 153-288 58-204 (292)
183 KOG4578 Uncharacterized conser 90.9 0.18 4E-06 49.1 2.8 59 433-491 338-396 (421)
184 PF05042 Caleosin: Caleosin re 90.7 0.78 1.7E-05 41.1 6.4 101 429-532 8-127 (174)
185 KOG1955 Ral-GTPase effector RA 90.6 0.51 1.1E-05 48.6 5.9 63 464-528 230-292 (737)
186 KOG3866 DNA-binding protein of 90.0 0.56 1.2E-05 45.4 5.2 61 469-529 248-324 (442)
187 KOG4347 GTPase-activating prot 89.5 0.48 1E-05 50.8 4.7 102 384-487 492-612 (671)
188 KOG4347 GTPase-activating prot 89.2 1.8 4E-05 46.5 8.8 78 445-523 535-612 (671)
189 PF05517 p25-alpha: p25-alpha 88.5 2.3 4.9E-05 38.0 7.8 59 471-529 8-69 (154)
190 KOG2243 Ca2+ release channel ( 88.5 4.4 9.5E-05 46.9 11.3 59 469-528 4061-4119(5019)
191 PF09069 EF-hand_3: EF-hand; 87.6 4 8.6E-05 32.6 7.8 67 464-533 2-79 (90)
192 KOG0042 Glycerol-3-phosphate d 87.4 1 2.2E-05 47.5 5.5 64 466-529 594-657 (680)
193 PF08726 EFhand_Ca_insen: Ca2+ 82.7 0.82 1.8E-05 34.5 1.7 55 463-525 4-65 (69)
194 KOG0039 Ferric reductase, NADH 80.1 3.5 7.6E-05 45.9 6.3 87 442-536 2-96 (646)
195 KOG3866 DNA-binding protein of 77.8 23 0.0005 34.7 10.0 115 378-494 183-325 (442)
196 PF14513 DAG_kinase_N: Diacylg 76.7 5 0.00011 34.9 4.9 69 410-478 5-82 (138)
197 PLN02952 phosphoinositide phos 75.3 12 0.00026 40.9 8.4 84 409-493 13-110 (599)
198 PF08414 NADPH_Ox: Respiratory 74.8 6 0.00013 31.9 4.5 63 394-458 28-94 (100)
199 PF08726 EFhand_Ca_insen: Ca2+ 73.6 3.1 6.7E-05 31.5 2.5 57 395-452 5-65 (69)
200 PF09068 EF-hand_2: EF hand; 73.5 21 0.00045 30.7 7.9 96 380-492 25-124 (127)
201 KOG4321 Predicted phosphate ac 71.5 8.8 0.00019 34.0 5.1 112 165-288 33-162 (279)
202 PRK04974 glycerol-3-phosphate 69.8 27 0.00058 40.0 9.8 51 294-345 147-199 (818)
203 KOG0035 Ca2+-binding actin-bun 69.4 20 0.00042 40.8 8.5 97 428-525 747-848 (890)
204 PF04028 DUF374: Domain of unk 69.2 15 0.00032 28.2 5.4 51 208-260 21-71 (74)
205 KOG2243 Ca2+ release channel ( 68.7 20 0.00042 42.1 8.1 56 401-456 4062-4120(5019)
206 KOG1707 Predicted Ras related/ 66.9 11 0.00025 40.4 5.7 91 387-477 306-398 (625)
207 KOG0998 Synaptic vesicle prote 66.6 4.7 0.0001 46.3 3.2 137 393-532 8-193 (847)
208 TIGR01848 PHA_reg_PhaR polyhyd 64.9 18 0.00038 29.7 5.2 73 472-544 10-93 (107)
209 PF08976 DUF1880: Domain of un 63.2 6.6 0.00014 32.7 2.5 32 498-529 4-35 (118)
210 PF05517 p25-alpha: p25-alpha 61.2 37 0.00079 30.3 7.2 58 401-458 7-71 (154)
211 KOG1265 Phospholipase C [Lipid 58.3 1.2E+02 0.0027 34.4 11.7 85 409-493 196-299 (1189)
212 KOG1264 Phospholipase C [Lipid 57.4 62 0.0013 36.3 9.2 140 389-529 136-293 (1267)
213 KOG4004 Matricellular protein 55.4 5.1 0.00011 36.5 0.7 55 434-491 193-248 (259)
214 PLN02222 phosphoinositide phos 55.3 33 0.00072 37.5 7.0 64 464-529 24-90 (581)
215 KOG4286 Dystrophin-like protei 55.2 95 0.0021 34.5 10.1 148 381-532 405-583 (966)
216 PLN02228 Phosphoinositide phos 53.3 46 0.00099 36.3 7.6 65 463-529 22-92 (567)
217 PLN02230 phosphoinositide phos 49.4 57 0.0012 35.8 7.6 65 464-529 28-102 (598)
218 KOG1954 Endocytosis/signaling 48.0 1.8E+02 0.0038 29.9 10.0 56 466-524 445-500 (532)
219 PF12174 RST: RCD1-SRO-TAF4 (R 47.6 18 0.00039 27.4 2.5 46 481-529 8-53 (70)
220 PF04876 Tenui_NCP: Tenuivirus 46.2 1.5E+02 0.0032 26.0 7.9 84 430-537 85-168 (175)
221 KOG2419 Phosphatidylserine dec 45.2 17 0.00036 39.3 2.7 109 430-547 439-551 (975)
222 PF05872 DUF853: Bacterial pro 42.4 83 0.0018 33.2 7.1 47 378-424 108-156 (502)
223 PF09069 EF-hand_3: EF-hand; 42.3 1.3E+02 0.0028 24.1 6.7 26 396-422 3-28 (90)
224 PF07879 PHB_acc_N: PHB/PHA ac 42.1 47 0.001 24.5 3.8 22 472-493 10-31 (64)
225 PF02459 Adeno_terminal: Adeno 41.7 2.7E+02 0.0059 29.9 10.8 160 332-513 326-503 (548)
226 PF14513 DAG_kinase_N: Diacylg 39.5 1E+02 0.0022 26.9 6.3 69 443-514 6-82 (138)
227 PF01146 Caveolin: Caveolin; 39.0 1.3E+02 0.0028 26.6 6.8 22 94-115 72-93 (148)
228 PLN02228 Phosphoinositide phos 39.0 90 0.002 34.1 7.1 55 398-454 26-90 (567)
229 cd07313 terB_like_2 tellurium 37.8 1.1E+02 0.0024 24.8 6.1 58 429-488 38-95 (104)
230 PF05099 TerB: Tellurite resis 37.0 29 0.00062 30.0 2.6 75 409-486 36-117 (140)
231 cd07313 terB_like_2 tellurium 37.0 46 0.001 27.0 3.7 52 442-493 13-65 (104)
232 KOG3449 60S acidic ribosomal p 34.4 1.7E+02 0.0036 24.3 6.2 53 468-525 4-56 (112)
233 PF11116 DUF2624: Protein of u 33.7 1.9E+02 0.0041 22.9 6.2 48 481-528 14-61 (85)
234 PF00404 Dockerin_1: Dockerin 31.8 65 0.0014 18.1 2.5 12 476-487 2-13 (21)
235 PLN02223 phosphoinositide phos 30.7 1.4E+02 0.0031 32.3 6.8 65 464-529 15-92 (537)
236 PF08414 NADPH_Ox: Respiratory 29.9 1.6E+02 0.0036 23.9 5.4 59 429-493 31-92 (100)
237 PLN02222 phosphoinositide phos 29.8 1.4E+02 0.0031 32.7 6.8 58 397-456 26-90 (581)
238 cd02977 ArsC_family Arsenate R 29.6 89 0.0019 25.5 4.3 55 480-535 34-91 (105)
239 PF07308 DUF1456: Protein of u 29.2 1.4E+02 0.0031 22.4 4.8 27 485-511 17-43 (68)
240 cd03035 ArsC_Yffb Arsenate Red 28.9 36 0.00078 28.1 1.7 52 481-535 35-89 (105)
241 PF02761 Cbl_N2: CBL proto-onc 28.9 2.9E+02 0.0062 21.9 6.5 48 480-527 21-68 (85)
242 PF14333 DUF4389: Domain of un 28.5 2.8E+02 0.0061 21.5 8.7 12 95-106 6-17 (80)
243 KOG4403 Cell surface glycoprot 27.9 89 0.0019 32.3 4.5 91 408-502 40-139 (575)
244 KOG4301 Beta-dystrobrevin [Cyt 26.4 1.4E+02 0.003 30.0 5.4 98 430-534 112-220 (434)
245 PRK09727 his operon leader pep 26.2 34 0.00073 19.4 0.7 8 4-11 9-16 (26)
246 PF08461 HTH_12: Ribonuclease 26.1 89 0.0019 23.3 3.2 37 478-514 10-46 (66)
247 PF12174 RST: RCD1-SRO-TAF4 (R 25.4 1.6E+02 0.0036 22.3 4.6 48 443-494 7-54 (70)
248 KOG2871 Uncharacterized conser 25.1 59 0.0013 33.0 2.7 63 464-526 308-371 (449)
249 PTZ00373 60S Acidic ribosomal 25.0 2.7E+02 0.0058 23.4 6.1 54 467-525 5-58 (112)
250 PF13608 Potyvirid-P3: Protein 24.8 97 0.0021 32.9 4.4 35 393-428 286-320 (445)
251 PF12419 DUF3670: SNF2 Helicas 24.8 1.3E+02 0.0028 26.3 4.6 49 478-526 80-138 (141)
252 PF03672 UPF0154: Uncharacteri 24.6 1.5E+02 0.0032 22.0 4.0 33 479-511 29-61 (64)
253 PF09068 EF-hand_2: EF hand; 24.5 4.5E+02 0.0097 22.5 8.9 64 465-528 41-124 (127)
254 PRK00523 hypothetical protein; 24.1 1.5E+02 0.0033 22.5 4.0 43 468-511 27-69 (72)
255 PLN02230 phosphoinositide phos 23.2 2.5E+02 0.0054 31.0 7.2 26 396-422 29-54 (598)
256 COG5562 Phage envelope protein 23.1 36 0.00078 29.2 0.7 24 433-456 77-100 (137)
257 KOG4070 Putative signal transd 22.8 1.9E+02 0.0041 25.5 4.9 46 430-475 59-108 (180)
258 TIGR02395 rpoN_sigma RNA polym 22.8 8.8E+02 0.019 25.6 11.1 66 389-454 90-157 (429)
259 KOG4004 Matricellular protein 22.5 36 0.00077 31.2 0.6 56 401-456 192-250 (259)
260 PF04695 Pex14_N: Peroxisomal 22.5 2.6E+02 0.0057 24.2 6.0 49 464-514 3-51 (136)
261 PF01023 S_100: S-100/ICaBP ty 21.9 1.3E+02 0.0029 20.4 3.2 28 466-493 7-36 (44)
262 KOG0039 Ferric reductase, NADH 21.7 1.4E+02 0.0031 33.4 5.2 81 410-493 2-89 (646)
263 cd07316 terB_like_DjlA N-termi 21.6 2.6E+02 0.0056 22.5 5.6 9 410-418 13-21 (106)
264 TIGR01639 P_fal_TIGR01639 Plas 21.3 2.1E+02 0.0046 20.9 4.4 32 480-511 8-39 (61)
265 PF03960 ArsC: ArsC family; I 20.9 68 0.0015 26.5 2.0 56 480-535 31-88 (110)
266 TIGR03703 plsB glycerol-3-phos 20.5 6E+02 0.013 29.4 9.8 24 172-195 26-49 (799)
267 PF05399 EVI2A: Ectropic viral 20.3 5.1E+02 0.011 24.3 7.4 13 168-180 168-180 (227)
268 PF07499 RuvA_C: RuvA, C-termi 20.1 3E+02 0.0064 18.8 4.9 39 484-526 3-41 (47)
No 1
>PLN02833 glycerol acyltransferase family protein
Probab=100.00 E-value=2.3e-35 Score=297.66 Aligned_cols=217 Identities=21% Similarity=0.345 Sum_probs=178.6
Q ss_pred HHHHHHHHHHHhhCeEEEEEccccCCCCCCCEEEeCCCCchhHHHHhhhcccceeeccccCCCCHH-HHHHHhcceEEEe
Q 008641 147 VTRVCSRCILFSFGYHWIRRKGKPAPRQIAPIVVSNHISYIEPIFFFYELFPTIVASESHDSIPFV-GTIIRAMQVIYVD 225 (558)
Q Consensus 147 ~~~~~~r~~~~~~g~~~~~~~g~~~~~~~~~iivsNH~S~~D~~~l~~~~~p~~v~k~~l~~~p~~-g~~~~~~g~i~v~ 225 (558)
+...+++.++...+.. ++++|.++.+++++|+||||+|++|++++.......+++|++....|++ +++++..|+++|+
T Consensus 136 ~v~~~~~~~~~~~~~~-i~v~G~e~~~~~~~IiVaNH~S~lDi~vL~s~~p~~~v~kk~~~~~~~~~~~~~~~~g~I~Vd 214 (376)
T PLN02833 136 LVELICSAFVASWTGV-IKYHGPRPSRRPKQVFVANHTSMIDFIVLEQMTPFAVIMQKHPGWVGFLQNTILESVGCIWFN 214 (376)
T ss_pred HHHHHHHHHHHHhEEE-EEEECCcCCCCCCEEEEECCCChHHHHHHHhhcCceEEEEehhhhhHHHHHHHHHHcCcEEec
Confidence 3344444333333333 6788887666778999999999999888776655567888777666665 4889999999999
Q ss_pred cCCccchHHHHHHHHHHHhcCCCCeEEEeeCceecCCCcccccccccccCCCceeEEEEEccCCCCCCCCC--CccHHHH
Q 008641 226 RFSQSSRKNAVSEIKRKASCDRFPRVLLFPEGTTTNGKFLISFQLGAFIPAYPIQPVIVRYPHVHFDQSWG--DVSLGKL 303 (558)
Q Consensus 226 r~~~~~~~~~~~~~~~~l~~~~~~~l~iFPEGt~s~~~~ll~Fk~Gaf~~~~pI~Pv~i~y~~~~~~~~w~--~~~~~~~ 303 (558)
|++..++....+.+.++++++++.+|+|||||||++++.+++||+|||..++||+||+|+|+..+.+..|+ ..++..+
T Consensus 215 R~~~~~~~~~~~~l~~~l~~~~G~~llIFPEGTrs~~~~l~~FK~Gaf~~g~pI~PVaI~y~~~~~~~fW~s~~~s~~~~ 294 (376)
T PLN02833 215 RTEAKDREVVAKKLRDHVQDPDRNPLLIFPEGTCVNNEYTVMFKKGAFELGCTVCPIAIKYNKIFVDAFWNSRKQSFTMH 294 (376)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCcccccchhhHhcCCeEEEEEEEecCcccccccCCCCccHHHh
Confidence 98877777788888888874222499999999999999999999999999999999999999888888895 4589999
Q ss_pred HHHHhccccceEEEEEecccCCCcccccCHHHHHHHHHHHHHHhcCCcccCCchhhHHHHHHhhhhccccchh
Q 008641 304 MFRMFTQFHNFMEVEYLPVVFPSDNQKENALRFAERTSHAMASALNAVQTSHAYGDLMLLMKASELKEENASS 376 (558)
Q Consensus 304 ~~~~~~~~~~~~~v~~l~pi~~~~~~~~~~~~~~~~v~~~i~~~l~~~~~~~~~~d~~~~~~a~~~~~p~~~~ 376 (558)
+++++++++..++|+|+||+.+. ++++++++++++++.|++.+|+....|+ +.++-..+..
T Consensus 295 l~~ll~~~~~~v~V~~LpPi~~~--~~e~~~efA~rv~~~Ia~~lgi~~~~wd----------g~lk~~~~~~ 355 (376)
T PLN02833 295 LLRLMTSWAVVCDVWYLEPQTLR--PGETPIEFAERVRDMIAKRAGLKKVPWD----------GYLKYYRPSP 355 (376)
T ss_pred HHHHhCCCceEEEEEECCCcCCC--CCCCHHHHHHHHHHHHHHhcCCCCCCCC----------CceeecCCCh
Confidence 99999999999999999999874 4678999999999999999999999998 7666655443
No 2
>cd07991 LPLAT_LPCAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as lysophosphatidylcholine acyltransferase 1 (LPCAT-1), glycerol-3-phosphate acyltransferase 3 (GPAT3), and similar sequences.
Probab=100.00 E-value=6.8e-36 Score=283.94 Aligned_cols=207 Identities=45% Similarity=0.780 Sum_probs=181.1
Q ss_pred HHHHHhhCeEEEEEccccCCCCCCCEEEeCCCCchhHHHHhhhcccceeeccccCCCCHHHHHHHhcceEEEecCCccch
Q 008641 153 RCILFSFGYHWIRRKGKPAPRQIAPIVVSNHISYIEPIFFFYELFPTIVASESHDSIPFVGTIIRAMQVIYVDRFSQSSR 232 (558)
Q Consensus 153 r~~~~~~g~~~~~~~g~~~~~~~~~iivsNH~S~~D~~~l~~~~~p~~v~k~~l~~~p~~g~~~~~~g~i~v~r~~~~~~ 232 (558)
|++++++|+.++++.|.++.+++++|+||||+|++|++++.....++|++|.++.++|++|++++.+|+++|+|+++.+.
T Consensus 2 r~~~~~~~~~~~~v~g~~~~p~~~~iiv~NH~S~~D~~~l~~~~~~~fv~k~el~~~p~~g~~~~~~g~i~v~R~~~~~~ 81 (211)
T cd07991 2 RVLLFAFGFYVIKVHGKPDPPEAPRIIVANHTSFIDPLILFSDLFPSIVAKKELGKLPFIGTILRALGCIFVDRSEPKDR 81 (211)
T ss_pred eEEEEEEEEEEEEEECCCCCCCCCeEEEECCCcHHHHHHHhhhcCcEEEEehhhccCcHHHHHHHhCCceEEeCCCchhH
Confidence 34455656566999999887788999999999999988888776668999999999999999999999999999988777
Q ss_pred HHHHHHHHHHHhcCCCCeEEEeeCceecCCCcccccccccccCCCceeEEEEEccCCCCCCCCCCc--cHHHHHHHHhcc
Q 008641 233 KNAVSEIKRKASCDRFPRVLLFPEGTTTNGKFLISFQLGAFIPAYPIQPVIVRYPHVHFDQSWGDV--SLGKLMFRMFTQ 310 (558)
Q Consensus 233 ~~~~~~~~~~l~~~~~~~l~iFPEGt~s~~~~ll~Fk~Gaf~~~~pI~Pv~i~y~~~~~~~~w~~~--~~~~~~~~~~~~ 310 (558)
.+.++.+.+.++++++.+|+|||||||++++.+++||+|+|.+++|||||+|+|........|... ..+.++++++..
T Consensus 82 ~~~~~~~~~~~~~~~g~~v~iFPEGtrs~~~~l~~Fk~gaf~~~~pI~Pv~i~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 161 (211)
T cd07991 82 KKVVEEIKERATDPNWPPILIFPEGTTTNGKALIMFKKGAFEPGVPVQPVAIRYPNKFVDAFWNSSGYSSLMYLFRLLTQ 161 (211)
T ss_pred HHHHHHHHHHHhCCCCCeEEEecCccccCCCEEEeeccccccCCCeeEEEEEEecCccCCcccCCCCccHHHHHHHHhCC
Confidence 888899999888642249999999999999999999999999999999999999876555556432 345788888999
Q ss_pred ccceEEEEEecccCCCcccccCHHHHHHHHHHHHHHhcCCcccCCchhhH
Q 008641 311 FHNFMEVEYLPVVFPSDNQKENALRFAERTSHAMASALNAVQTSHAYGDL 360 (558)
Q Consensus 311 ~~~~~~v~~l~pi~~~~~~~~~~~~~~~~v~~~i~~~l~~~~~~~~~~d~ 360 (558)
+++.++|+|+||++++ .+.++.++++++++++|++.+++..++++.+|+
T Consensus 162 ~~~~v~v~~l~pi~~~-~~~~~~~~l~~~v~~~i~~~l~~~~~~~~~~~~ 210 (211)
T cd07991 162 PANVLEVEFLPVYTPS-EEGEDPKEFANRVRLIMANKLGLPATDWTGEDK 210 (211)
T ss_pred cceEEEEEECCCcccc-cCCCCHHHHHHHHHHHHHHhcCCCccCCCCccc
Confidence 9999999999999986 567899999999999999999999999998886
No 3
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=100.00 E-value=5.9e-36 Score=279.82 Aligned_cols=362 Identities=13% Similarity=0.051 Sum_probs=321.4
Q ss_pred EEEeC-CCCchhHHHHhhhcccceeeccccCCCCHHHHHHHhcceEEEecCCccchHHHHHHHHHHHh-cCCCCeEEEee
Q 008641 178 IVVSN-HISYIEPIFFFYELFPTIVASESHDSIPFVGTIIRAMQVIYVDRFSQSSRKNAVSEIKRKAS-CDRFPRVLLFP 255 (558)
Q Consensus 178 iivsN-H~S~~D~~~l~~~~~p~~v~k~~l~~~p~~g~~~~~~g~i~v~r~~~~~~~~~~~~~~~~l~-~~~~~~l~iFP 255 (558)
..+|| |.|..|..++.....+..+++.+..++|.+|...++..++++.|....+++.+++.+..+-. .+.|+++++||
T Consensus 9 ~~~s~p~ss~~d~~~~~s~s~~s~v~~~~~~~~~~~~r~~~y~~~~l~~~~~~ds~k~tV~~i~~~~~~~~~~~qIll~~ 88 (412)
T KOG4666|consen 9 NSNSNPPSSKEDRPLLKSESDLAAAIEELDKKFAPYARTDLYGTMGLGPFPMTENIKLAVALVTLVPLRFLLSMSILLLY 88 (412)
T ss_pred cccCCCCccccccchhhhcccHHHHHHhhcccCCchhhhhhhccceeccCCChHHHHHHHHHHHHhhhccCCCceeeeee
Confidence 45555 88888877777777788899999999999999999999999999999999999999887654 47789999999
Q ss_pred CceecCCCcccccccccccCCCceeEEEEEccCCCCCCC-CCCccHHHHHHHHhccccceEEEEEecccCCCcccccCHH
Q 008641 256 EGTTTNGKFLISFQLGAFIPAYPIQPVIVRYPHVHFDQS-WGDVSLGKLMFRMFTQFHNFMEVEYLPVVFPSDNQKENAL 334 (558)
Q Consensus 256 EGt~s~~~~ll~Fk~Gaf~~~~pI~Pv~i~y~~~~~~~~-w~~~~~~~~~~~~~~~~~~~~~v~~l~pi~~~~~~~~~~~ 334 (558)
||||+ .+.-|++|+|.++.|++|+.++|+++..+.. |....+....|.+++++...+.++|.+...|++.++.++.
T Consensus 89 ~~~C~---~~~~Fk~~~~~P~~~~q~~~l~y~n~~~~~t~Wq~~~~v~~~~~~~~~l~~~~~~~~i~~~~P~~ee~~d~~ 165 (412)
T KOG4666|consen 89 YLICR---VFTLFSAPYRGPEEEEDEGGVVFQEDYAHMEGWKRTVIVRSGRFLSRVLLFVFGFYWIHESCPDRDSDMDSN 165 (412)
T ss_pred ccceE---EEEEecCCccCCCCCcCcceEeccccccceeccccchHHHHHHHHHHHHHhheeEEEEeccCCChhhhcCCc
Confidence 99999 7999999999999999999999999766654 5666788899999999999999999999999988899999
Q ss_pred HHHHHHHHHHHHhcCCcccCCchhhHHHHHHhhhhccccchhHHHHHHhhccccccChHHHHHHHHHHHhh-CCCCCCcc
Q 008641 335 RFAERTSHAMASALNAVQTSHAYGDLMLLMKASELKEENASSYMVEMARVGSIFHISSLEAVNFLEKFLSM-NPDPSGCV 413 (558)
Q Consensus 335 ~~~~~v~~~i~~~l~~~~~~~~~~d~~~~~~a~~~~~p~~~~~l~e~~~~~~~~~lt~~~~~~~~~~F~~~-D~d~~G~I 413 (558)
.++..++..|++++|...++++++||.++..++++.+|+... +.|+.++++..+|..+-..+-..-+... -..+.+.|
T Consensus 166 ~~at~v~~~maealg~~vtd~t~edc~l~vs~gql~lpm~a~-l~eF~~~~r~lkL~~~gl~k~ld~y~~var~~kg~~i 244 (412)
T KOG4666|consen 166 PKTTSTEINMAEALGTEVTDRTGEDCSLHVSYGQLLLPMSAS-LPEFVAKRRVLKLPLVGLIKKLDGYVYVAREAKGPDI 244 (412)
T ss_pred ccchhHHHHHHHhhCCCCCCCchHHHHHHHhhccEecccccc-hHHHHHHHhccCCChHHHHHHHhhHHHHHHhccCCCc
Confidence 999999999999999999999999999999999999999998 9999999999999887654433333222 23467889
Q ss_pred cHHHHHHHhccCCcHHHHHHHhhhcCCCCCceeHHHHHHHHHhhccCcchhHHHHHHhhhhCCCCCCcccHHHHHHHHHH
Q 008641 414 KLLDFLSVLRLKTCPLSDEIFGFIDVDKNGSITFKQFLYASAHVMKLPLFWQACELAFAECDPDGNGFISENQLEVTIRP 493 (558)
Q Consensus 414 s~~ef~~~l~~~~~~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~ 493 (558)
...||...+....++.+..+|..||.+++|.++|.|....++.++....+.+.++.+|+.|+.+.||.+..++|.-+|+.
T Consensus 245 gi~efa~~l~vpvsd~l~~~f~LFde~~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f~v~eDg~~ge~~ls~ilq~ 324 (412)
T KOG4666|consen 245 GIVEFAVNLRVPVSDKLAPTFMLFDEGTTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFSVAEDGISGEHILSLILQV 324 (412)
T ss_pred ceeEeeeeeecchhhhhhhhhheecCCCCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhcccccccccchHHHHHHHHH
Confidence 99999999999988999999999999999999999999999999998888999999999999999999999999998887
Q ss_pred hCCCCcHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCcchHHHHhhhccCC
Q 008641 494 AIPDLNKYEIDSLFRLFDSDGDGRVSRDDFICCLRKNPLLIAIFSPTLLHT 544 (558)
Q Consensus 494 ~~~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~~~~~~~~~~~~~l~~~ 544 (558)
.. ++.+-.+-.+|...+...||+|++++|.+++...|++...+..|+.+.
T Consensus 325 ~l-gv~~l~v~~lf~~i~q~d~~ki~~~~f~~fa~~~p~~a~~~~~yld~~ 374 (412)
T KOG4666|consen 325 VL-GVEVLRVPVLFPSIEQKDDPKIYASNFRKFAATEPNLALSELGYLDKR 374 (412)
T ss_pred hc-CcceeeccccchhhhcccCcceeHHHHHHHHHhCchhhhhhhccccch
Confidence 53 456666778999999999999999999999999999998888877553
No 4
>KOG2848 consensus 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid transport and metabolism]
Probab=100.00 E-value=8.1e-34 Score=259.50 Aligned_cols=195 Identities=19% Similarity=0.344 Sum_probs=167.5
Q ss_pred HHHHHHHHHHHHhhCeEEEEEccccC-CCCCCCEEEeCCCCchhHHHHhhhccc--ceeeccccCCCCHHHHHHHhcceE
Q 008641 146 WVTRVCSRCILFSFGYHWIRRKGKPA-PRQIAPIVVSNHISYIEPIFFFYELFP--TIVASESHDSIPFVGTIIRAMQVI 222 (558)
Q Consensus 146 ~~~~~~~r~~~~~~g~~~~~~~g~~~-~~~~~~iivsNH~S~~D~~~l~~~~~p--~~v~k~~l~~~p~~g~~~~~~g~i 222 (558)
.+.+++.+.+..+.|++ ++++|.++ +.++|+|+||||||.+|.+.+.....+ +.++|.+++..|++||+++..|.+
T Consensus 60 ~~a~~~~~~~~y~~g~r-~ev~g~E~L~~~~p~ViVsNHQS~LDil~m~~i~p~~cvviaKr~L~yvp~~gl~m~L~gvv 138 (276)
T KOG2848|consen 60 FIAKLWFHSMKYLLGLR-FEVRGEENLPKSKPAVIVSNHQSSLDILGMGSIWPKNCVVIAKRSLFYVPIFGLAMYLSGVV 138 (276)
T ss_pred HHHHHHHHHHhhhcceE-EEEechhhCCccCCeEEEecchhHHHHHHHHhhcCCceEEEEeeeeeecchHHHHHHHcCce
Confidence 45677777777888987 79999888 456699999999999997777777555 568999999999999999999999
Q ss_pred EEecCCccchHHHHHHHHHHHhcCCCCeEEEeeCceecCCCccccccccccc----CCCceeEEEEEccCCCCCCCCCCc
Q 008641 223 YVDRFSQSSRKNAVSEIKRKASCDRFPRVLLFPEGTTTNGKFLISFQLGAFI----PAYPIQPVIVRYPHVHFDQSWGDV 298 (558)
Q Consensus 223 ~v~r~~~~~~~~~~~~~~~~l~~~~~~~l~iFPEGt~s~~~~ll~Fk~Gaf~----~~~pI~Pv~i~y~~~~~~~~w~~~ 298 (558)
++||.++++..+.++++.+.++.++ ..|+|||||||++++.++|||+|||. +++||+||++.....++++.-
T Consensus 139 fIdR~r~~~Ai~~l~~~~~~mkk~~-~kvWvFPEGTRn~~g~llPFKKGAF~lAvqaqVPIVPvv~ssy~~f~~~~~--- 214 (276)
T KOG2848|consen 139 FIDRSRREKAIDTLDKCAERMKKEN-RKVWVFPEGTRNKEGRLLPFKKGAFHLAVQAQVPIVPVVFSSYGDFYSTKE--- 214 (276)
T ss_pred EEecCCHHHHHHHHHHHHHHHHhCC-eeEEEccCCccCCCCcccccccceeeeehhcCCCEEEEEEecccccccCcc---
Confidence 9999999999999999999998876 59999999999999999999999886 899999999987766554331
Q ss_pred cHHHHHHHHhccccceEEEEEecccCCCcccccCHHHHHHHHHHHHHHhcCCcccC
Q 008641 299 SLGKLMFRMFTQFHNFMEVEYLPVVFPSDNQKENALRFAERTSHAMASALNAVQTS 354 (558)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~v~~l~pi~~~~~~~~~~~~~~~~v~~~i~~~l~~~~~~ 354 (558)
+.++ .+.+.|+++|||+.++...+|..++++++|++|.+.+.+...+
T Consensus 215 -------k~f~--sG~v~V~vL~pI~TeglT~ddv~~L~~~~R~~M~~~~~ei~~~ 261 (276)
T KOG2848|consen 215 -------KVFN--SGNVIVRVLPPIPTEGLTKDDVDVLSDECRSAMLETFKEISAE 261 (276)
T ss_pred -------ceee--cceEEEEEcCCCCccCCCcccHHHHHHHHHHHHHHHHHHhchh
Confidence 1122 4789999999999988888999999999999999998766543
No 5
>PRK15018 1-acyl-sn-glycerol-3-phosphate acyltransferase; Provisional
Probab=100.00 E-value=1.1e-31 Score=258.45 Aligned_cols=187 Identities=22% Similarity=0.317 Sum_probs=152.3
Q ss_pred HHHHHHHHHHhhCeEEEEEccccC-CCCCCCEEEeCCCCchhHHHHhhhccc--ceeeccccCCCCHHHHHHHhcceEEE
Q 008641 148 TRVCSRCILFSFGYHWIRRKGKPA-PRQIAPIVVSNHISYIEPIFFFYELFP--TIVASESHDSIPFVGTIIRAMQVIYV 224 (558)
Q Consensus 148 ~~~~~r~~~~~~g~~~~~~~g~~~-~~~~~~iivsNH~S~~D~~~l~~~~~p--~~v~k~~l~~~p~~g~~~~~~g~i~v 224 (558)
.+++.++ ++++|++ +.+.|.++ ++++++|+||||+|++|++++.....+ .|++|++++++|++||+++.+|+++|
T Consensus 39 ~~~~~~~-~~~~g~~-v~v~g~e~~p~~~~~IivaNH~S~lD~~~l~~~~~~~~~fvaK~el~~~P~~g~~~~~~g~i~V 116 (245)
T PRK15018 39 GHMFGRL-APLFGLK-VECRKPADAESYGNAIYIANHQNNYDMVTASNIVQPPTVTVGKKSLLWIPFFGQLYWLTGNLLI 116 (245)
T ss_pred HHHHHHH-HHHcCeE-EEEEccCCCCCCCCEEEEECCCchHHHHHHHHHhCCCcEEEEeHHHhhCCHHHHHHHhCCCeEE
Confidence 3334443 4578976 78888776 456899999999999998777655443 58999999999999999999999999
Q ss_pred ecCCccchHHHHHHHHHHHhcCCCCeEEEeeCceecCCCcccccccccc----cCCCceeEEEEEccCCCCCCCCCCccH
Q 008641 225 DRFSQSSRKNAVSEIKRKASCDRFPRVLLFPEGTTTNGKFLISFQLGAF----IPAYPIQPVIVRYPHVHFDQSWGDVSL 300 (558)
Q Consensus 225 ~r~~~~~~~~~~~~~~~~l~~~~~~~l~iFPEGt~s~~~~ll~Fk~Gaf----~~~~pI~Pv~i~y~~~~~~~~w~~~~~ 300 (558)
||+++.+..+.++++.+.+++++ .+++|||||||+.++.+.+||+|+| ++++||+||+|.++..... .|
T Consensus 117 dR~~~~~~~~~l~~~~~~l~~~g-~sv~IFPEGTRs~~g~l~~Fk~Ga~~lA~~~~~PIvPv~i~g~~~~~~-~~----- 189 (245)
T PRK15018 117 DRNNRTKAHGTIAEVVNHFKKRR-ISIWMFPEGTRSRGRGLLPFKTGAFHAAIAAGVPIIPVCVSTTSNKIN-LN----- 189 (245)
T ss_pred eCCCHHHHHHHHHHHHHHHHhCC-CEEEEECCccCCCCCCCCCccHHHHHHHHHcCCCEEEEEEECcccccc-cC-----
Confidence 99988777788888888887644 4899999999999999999999965 4999999999998764321 10
Q ss_pred HHHHHHHhccccceEEEEEecccCCCcccccCHHHHHHHHHHHHHHhcCCc
Q 008641 301 GKLMFRMFTQFHNFMEVEYLPVVFPSDNQKENALRFAERTSHAMASALNAV 351 (558)
Q Consensus 301 ~~~~~~~~~~~~~~~~v~~l~pi~~~~~~~~~~~~~~~~v~~~i~~~l~~~ 351 (558)
...++.++|++++||++++...++.+++++++++.|++.+...
T Consensus 190 --------~~~~g~i~v~~~~PI~~~~~~~~~~~~l~~~v~~~i~~~~~~l 232 (245)
T PRK15018 190 --------RLHNGLVIVEMLPPIDVSQYGKDQVRELAAHCRSIMEQKIAEL 232 (245)
T ss_pred --------CccCeeEEEEEcCCCcCCCCChhhHHHHHHHHHHHHHHHHHHH
Confidence 0126789999999999987767789999999999999976433
No 6
>PTZ00261 acyltransferase; Provisional
Probab=99.94 E-value=9.2e-26 Score=221.66 Aligned_cols=166 Identities=15% Similarity=0.155 Sum_probs=128.5
Q ss_pred CCCCCCEEEeCCCCchhHHHHhhhccc------ceeeccccCCCCHHHHHHHhcceEEEecCCcc---------chHHHH
Q 008641 172 PRQIAPIVVSNHISYIEPIFFFYELFP------TIVASESHDSIPFVGTIIRAMQVIYVDRFSQS---------SRKNAV 236 (558)
Q Consensus 172 ~~~~~~iivsNH~S~~D~~~l~~~~~p------~~v~k~~l~~~p~~g~~~~~~g~i~v~r~~~~---------~~~~~~ 236 (558)
.+++++|++|||+|++|++++.....+ +|++|++++++|++||+++.+|+|+|+|++.. +..+..
T Consensus 126 IP~~~~IivsNHqS~lDi~vl~~~~p~r~~~~~~fVAKkELfkiP~fG~~l~~~G~IPVdR~~~~~g~~~vdrea~~~v~ 205 (355)
T PTZ00261 126 ISRHGCAYVGNHTSFWDVYAFIGLTPFRHLLNTRTLMKSSLRKIPIFGGVFDRVGHFPVHFKSDSDGNFEVDKEKQAQVQ 205 (355)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHcccccccccEEEEHHHHhhccHHHHHHHHCCCeeeecccccccccccchHHHHHHH
Confidence 456789999999999998888776542 68999999999999999999999999985421 233455
Q ss_pred HHHHHHHhcCCCCeEEEeeCceecCC-Ccccccccccc----cCCCceeEEEEEccCCCCCCCCCCccHHHHHHHHhccc
Q 008641 237 SEIKRKASCDRFPRVLLFPEGTTTNG-KFLISFQLGAF----IPAYPIQPVIVRYPHVHFDQSWGDVSLGKLMFRMFTQF 311 (558)
Q Consensus 237 ~~~~~~l~~~~~~~l~iFPEGt~s~~-~~ll~Fk~Gaf----~~~~pI~Pv~i~y~~~~~~~~w~~~~~~~~~~~~~~~~ 311 (558)
+.+.+.+++|. +++||||||||.+ +.+.+||+|+| +.++||+||++.+++.. |+.... +...
T Consensus 206 ~~~~e~Lk~G~--sLvIFPEGTRS~~gg~L~pFK~GaF~LAieagvPIVPvai~Gs~~~----wP~g~~-------l~~~ 272 (355)
T PTZ00261 206 QAIDAHLRLGG--SLAFFPEGAINKHPQVLQTFRYGTFATIIKHRMEVYYMVSVGSEKT----WPWWMM-------IGGL 272 (355)
T ss_pred HHHHHHHHCCC--EEEEECCcCCcCCCCcCCCCcHHHHHHHHHcCCCEEEEEEeChhhc----CCCCCc-------cCCC
Confidence 56667889998 9999999999986 45999999966 48999999999987753 433321 1113
Q ss_pred cceEEEEEec-ccCCCcccccCHHHHHHHHHHHHHHhcCCccc
Q 008641 312 HNFMEVEYLP-VVFPSDNQKENALRFAERTSHAMASALNAVQT 353 (558)
Q Consensus 312 ~~~~~v~~l~-pi~~~~~~~~~~~~~~~~v~~~i~~~l~~~~~ 353 (558)
++.++|+||+ ||++++ .+.+++++++++.|++..+....
T Consensus 273 pg~I~V~iG~~PI~~~~---~~~~eL~~~lr~lmqe~~~~I~~ 312 (355)
T PTZ00261 273 PADMHIRIGAYPIDYDR---DSSKDVAVGLQQRMQKVRDEIAA 312 (355)
T ss_pred CceEEEEECCCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHH
Confidence 6789999998 998744 46666777777777776555433
No 7
>PLN02901 1-acyl-sn-glycerol-3-phosphate acyltransferase
Probab=99.93 E-value=3.1e-25 Score=210.91 Aligned_cols=185 Identities=21% Similarity=0.246 Sum_probs=146.7
Q ss_pred HHHHHHHHHHHHHhhCeEEEEEccccCCC--CCCCEEEeCCCCchhHHHHhhhccc-ceeeccccCCCCHHHHHHHhcce
Q 008641 145 MWVTRVCSRCILFSFGYHWIRRKGKPAPR--QIAPIVVSNHISYIEPIFFFYELFP-TIVASESHDSIPFVGTIIRAMQV 221 (558)
Q Consensus 145 ~~~~~~~~r~~~~~~g~~~~~~~g~~~~~--~~~~iivsNH~S~~D~~~l~~~~~p-~~v~k~~l~~~p~~g~~~~~~g~ 221 (558)
.++.+++.++.+ ..++ ++++.|.++.+ ++|+|+||||+|++|++++.....+ +|++|.++..+|++||+++.+|+
T Consensus 20 ~~~~~~~~~~~~-~~~~-~~~v~g~e~lp~~~~p~iiv~NH~S~~D~~~l~~~~~~~~~v~k~~l~~~P~~g~~~~~~~~ 97 (214)
T PLN02901 20 HFINKVWATLST-SPFY-KIEVEGLENLPSPDEPAVYVSNHQSFLDIYTLFHLGRPFKFISKTSIFLIPIIGWAMYMTGH 97 (214)
T ss_pred HHHHHHHHHHHh-hcce-eEEEECCccCCCCCCcEEEEECCCCchHHHHHhhcCCceEEEEEHHhhhccHHHHHHHHCCc
Confidence 344444444333 2344 48899977754 4789999999999998776544333 68999999999999999999999
Q ss_pred EEEecCCccchHHHHHHHHHHHhcCCCCeEEEeeCceecCCCccccccccccc----CCCceeEEEEEccCCCCCCCCCC
Q 008641 222 IYVDRFSQSSRKNAVSEIKRKASCDRFPRVLLFPEGTTTNGKFLISFQLGAFI----PAYPIQPVIVRYPHVHFDQSWGD 297 (558)
Q Consensus 222 i~v~r~~~~~~~~~~~~~~~~l~~~~~~~l~iFPEGt~s~~~~ll~Fk~Gaf~----~~~pI~Pv~i~y~~~~~~~~w~~ 297 (558)
++|+|++..+..+.++++.+.+++|. +++||||||++.++.+.+|++|++. .++||+||++.|.+... ..
T Consensus 98 i~v~R~~~~~~~~~~~~~~~~l~~g~--~v~IfPEGtr~~~~~~~~f~~G~~~lA~~~~~pIvPv~i~g~~~~~----~~ 171 (214)
T PLN02901 98 IPLKRMDRRSQLECLKRCMELLKKGA--SVFFFPEGTRSKDGKLAAFKKGAFSVAAKTGVPVVPITLVGTGKIM----PN 171 (214)
T ss_pred EEEecCCcHHHHHHHHHHHHHHhCCC--EEEEeCCCCCCCCCcccCchhhHHHHHHHcCCCEEEEEEecchhhC----cC
Confidence 99999887777788999999999998 9999999999999999999999654 99999999999876432 21
Q ss_pred ccHHHHHHHHhccccceEEEEEecccCCCcccccCHHHHHHHHHHHHHHhcC
Q 008641 298 VSLGKLMFRMFTQFHNFMEVEYLPVVFPSDNQKENALRFAERTSHAMASALN 349 (558)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~v~~l~pi~~~~~~~~~~~~~~~~v~~~i~~~l~ 349 (558)
...+ ...++.++|++++||.+ .+.++++++++++|++.++
T Consensus 172 ~~~~-------~~~~~~i~v~~~~pi~~-----~~~~~l~~~~~~~i~~~~~ 211 (214)
T PLN02901 172 GKEG-------ILNPGSVKVVIHPPIEG-----SDADELCNEARKVIAESLV 211 (214)
T ss_pred CCcc-------cccCCeEEEEECCCcCC-----CCHHHHHHHHHHHHHHHhh
Confidence 1100 01256799999999987 3678999999999998864
No 8
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=99.92 E-value=3.1e-24 Score=224.98 Aligned_cols=202 Identities=20% Similarity=0.247 Sum_probs=157.4
Q ss_pred HHHHHHHhhCeEEEEEccccCCC----CCCCEEEeCCCCchhHHHHhhhccc--ceeeccccCCCCHHHHHHHhcceEEE
Q 008641 151 CSRCILFSFGYHWIRRKGKPAPR----QIAPIVVSNHISYIEPIFFFYELFP--TIVASESHDSIPFVGTIIRAMQVIYV 224 (558)
Q Consensus 151 ~~r~~~~~~g~~~~~~~g~~~~~----~~~~iivsNH~S~~D~~~l~~~~~p--~~v~k~~l~~~p~~g~~~~~~g~i~v 224 (558)
+.+.++.++|++ +.++|.++.+ ++++|+||||+|++|++++...+.. .++++ .+..+++++..++.+++
T Consensus 274 ~~~~~~~~~Gv~-v~v~G~e~~p~~~~~~~~l~v~NHqS~lD~~~l~~al~~~~~~v~~----~~~~l~~~l~~i~~~~l 348 (497)
T PLN02177 274 IARYNYKLLGIR-LIVKGNPPPPPKKGQPGVLFVCNHRTVLDPVVTAVALGRKISCVTY----SISKFSELISPIKAVAL 348 (497)
T ss_pred HHHHHHHHcCcE-EEEEcCCCCCcccCCCCeEEEECCCCcchHHHHHHHcCCCeEEEee----hHHHHHHHHHhcCEEEE
Confidence 345567788987 8999987754 3689999999999999888776653 35553 23446899999999999
Q ss_pred ecCCccchHHHHHHHHHHHhcCCCCeEEEeeCceecCCCcccccccccccCCCceeEEEEEccCCCCCCCC-CCccHHHH
Q 008641 225 DRFSQSSRKNAVSEIKRKASCDRFPRVLLFPEGTTTNGKFLISFQLGAFIPAYPIQPVIVRYPHVHFDQSW-GDVSLGKL 303 (558)
Q Consensus 225 ~r~~~~~~~~~~~~~~~~l~~~~~~~l~iFPEGt~s~~~~ll~Fk~Gaf~~~~pI~Pv~i~y~~~~~~~~w-~~~~~~~~ 303 (558)
+|++.++.. .+++.+++| .++|||||||++++.+++||.|++...+||+||+|.+..+.+...- +...++..
T Consensus 349 dR~r~~~~~----~~~~lL~~g---~lvIFPEGTrs~~~~l~~Fk~~fa~l~~pIVPVAI~~~~~~f~~~t~~~~~~~d~ 421 (497)
T PLN02177 349 SREREKDAA----NIKRLLEEG---DLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQSMFHGTTVRGYKLLDP 421 (497)
T ss_pred eCCChHHHH----HHHHHHhcC---CEEECcCcCCCCCCCcchHHHHHHHHCCcEEEEEEEcccccccccccccceecch
Confidence 997643322 345666665 5889999999999999999999888889999999998886654322 22234445
Q ss_pred HHHHhccccceEEEEEecccCCCc--ccccCHHHHHHHHHHHHHHhcCCcccCCchhhHHHHHH
Q 008641 304 MFRMFTQFHNFMEVEYLPVVFPSD--NQKENALRFAERTSHAMASALNAVQTSHAYGDLMLLMK 365 (558)
Q Consensus 304 ~~~~~~~~~~~~~v~~l~pi~~~~--~~~~~~~~~~~~v~~~i~~~l~~~~~~~~~~d~~~~~~ 365 (558)
+|.+|.+ ...++|+|++|++++. ..+.+..++|++|++.|++.|+..+|..|-.|+.++..
T Consensus 422 ~~~~~~p-~~~y~V~fL~~l~~~~~~~~~~~~~evAn~Vq~~i~~~lg~~~t~~tr~dk~~~l~ 484 (497)
T PLN02177 422 YFVFMNP-RPTYEITFLNQLPKELTCKGGKSPIEVANYIQRVLAGTLGFECTNLTRKDKYAILA 484 (497)
T ss_pred hhhhcCC-CceEEEEECCCCChhhcccCCCCHHHHHHHHHHHHHHhhCceeccccHHHHHHHhc
Confidence 5556655 6678999999999865 46788999999999999999999999999999886653
No 9
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=99.92 E-value=4.6e-24 Score=217.69 Aligned_cols=199 Identities=20% Similarity=0.255 Sum_probs=158.0
Q ss_pred HHHHhhCeEEEEEccccCCC-C---CCCEEEeCCCCchhHHHHhhhccc--ceeeccccCCCCHHHHHHHhcceEEEecC
Q 008641 154 CILFSFGYHWIRRKGKPAPR-Q---IAPIVVSNHISYIEPIFFFYELFP--TIVASESHDSIPFVGTIIRAMQVIYVDRF 227 (558)
Q Consensus 154 ~~~~~~g~~~~~~~g~~~~~-~---~~~iivsNH~S~~D~~~l~~~~~p--~~v~k~~l~~~p~~g~~~~~~g~i~v~r~ 227 (558)
.+...+|++ ++++|.++++ + +++|+||||+|++|++++...+.. .+++ ++ ++.+++++..++.++++|+
T Consensus 264 ~~~~~~G~~-v~V~G~e~~P~~~~~~gvL~v~NH~S~lDp~~l~~al~R~v~~va---y~-~~~ls~ll~~i~avrv~R~ 338 (498)
T PLN02499 264 YVSRIFGGK-VIVKGKPPPPASGGNSGVLFVCTHRTLMDPVVLSTVLGRSIPAVT---YS-ISRLSEILSPIPTVRLTRI 338 (498)
T ss_pred HHHHhcCce-EEEEcCCCCCCcCCCCCEEEEeCCCCcccHHHHHHHcCCceeehH---hh-HHHHHHHhcccCeeeecCC
Confidence 344567876 8999988754 3 489999999999998888776643 3444 33 7888999999999999998
Q ss_pred CccchHHHHHHHHHHHhcCCCCeEEEeeCceecCCCcccccccccccCCCceeEEEEEccCCCCCCCC-CCccHHHHHHH
Q 008641 228 SQSSRKNAVSEIKRKASCDRFPRVLLFPEGTTTNGKFLISFQLGAFIPAYPIQPVIVRYPHVHFDQSW-GDVSLGKLMFR 306 (558)
Q Consensus 228 ~~~~~~~~~~~~~~~l~~~~~~~l~iFPEGt~s~~~~ll~Fk~Gaf~~~~pI~Pv~i~y~~~~~~~~w-~~~~~~~~~~~ 306 (558)
...+. +.+++.+++|+ |+|||||||++++.+++|++|+.+..+||+||+|.+....+..+- ....+...+|.
T Consensus 339 r~~d~----~air~lL~~G~---lvIFPEGTrsreg~LlrFk~l~aela~pVVPVAI~~~~~~f~gtta~g~k~~Dp~~f 411 (498)
T PLN02499 339 RDVDA----EKIKRELARGD---LVVCPEGTTCREPFLLRFSALFAELTDRIVPVAMNYRVGFFHATTARGWKGLDPIFF 411 (498)
T ss_pred chhHH----HHHHHHhhCCC---EEEcCCCCCCCCCcccccchhhhhhcCceEeEEEEeccceEEEEcCCCCchhhhhhh
Confidence 53322 55667788885 999999999999999999999999999999999999887654432 12245556666
Q ss_pred HhccccceEEEEEecccCCCc--ccccCHHHHHHHHHHHHHHhcCCcccCCchhhHHHHHH
Q 008641 307 MFTQFHNFMEVEYLPVVFPSD--NQKENALRFAERTSHAMASALNAVQTSHAYGDLMLLMK 365 (558)
Q Consensus 307 ~~~~~~~~~~v~~l~pi~~~~--~~~~~~~~~~~~v~~~i~~~l~~~~~~~~~~d~~~~~~ 365 (558)
+|.+ ...++|+|+++++.+. ..+++..++|++||+.|++.||..+|..|-.|++++..
T Consensus 412 ~mnP-~p~y~v~fL~~~~~~~t~~~g~s~~evan~vQ~~la~~LgfecT~lTrkdKy~~la 471 (498)
T PLN02499 412 FMNP-RPVYEVTFLNQLPVEATCSSGKSPHDVANYVQRILAATLGFECTNFTRKDKYRVLA 471 (498)
T ss_pred eecC-CceEEEEEcCCCChhhccCCCCChHHHHHHHHHHHHHHhCCccccccHHHHHHHhc
Confidence 6665 6677999999998742 24688999999999999999999999999999887654
No 10
>PRK14014 putative acyltransferase; Provisional
Probab=99.92 E-value=1.9e-23 Score=207.01 Aligned_cols=184 Identities=17% Similarity=0.177 Sum_probs=126.1
Q ss_pred HHHHHhhCeEEEEEccccC-CCCCCCEEEeCCCCchhHHHHhhhcc-----cceeeccccCCCCHHHHHHHhcceEEEec
Q 008641 153 RCILFSFGYHWIRRKGKPA-PRQIAPIVVSNHISYIEPIFFFYELF-----PTIVASESHDSIPFVGTIIRAMQVIYVDR 226 (558)
Q Consensus 153 r~~~~~~g~~~~~~~g~~~-~~~~~~iivsNH~S~~D~~~l~~~~~-----p~~v~k~~l~~~p~~g~~~~~~g~i~v~r 226 (558)
+++..+.|.+ +.+.|.++ ++++++|++|||+|++|++++...+. ++|++|+++.++|++|+.++.+|+++++|
T Consensus 65 ~~~~~~~g~k-~~V~G~e~l~~~~~~IiisNHqS~~D~l~l~~~~~~~~~~~kfv~K~eL~~iP~~G~~~~~~~~ifi~R 143 (301)
T PRK14014 65 VILRLLPRTQ-WDVEGLEGLSKKGWYLVISNHQSWVDILVLQYVFNRRIPMLKFFLKQELIWVPFLGLAWWALDFPFMKR 143 (301)
T ss_pred HHHHHhCCcE-EEEEcCCCCCCCCCEEEEECCCcHHHHHHHHHHHhhccCceEEEehHHhhhcccHHHHHHHcCCeEEec
Confidence 3344577876 78899876 45789999999999999988877653 36899999999999999999999999999
Q ss_pred CCccch----------HHHHHHHHHHHhcCCCCeEEEeeCceecCC----------Cccccccccccc----C----CCc
Q 008641 227 FSQSSR----------KNAVSEIKRKASCDRFPRVLLFPEGTTTNG----------KFLISFQLGAFI----P----AYP 278 (558)
Q Consensus 227 ~~~~~~----------~~~~~~~~~~l~~~~~~~l~iFPEGt~s~~----------~~ll~Fk~Gaf~----~----~~p 278 (558)
.++... .+.++++.+.+++.+ .+++|||||||+.. +.+++||.|+|. + -.+
T Consensus 144 ~~~~~~~~~p~~~~~d~~~~~~a~~~~~~~~-~~l~IFPEGTR~t~~k~~~~~~~~~~lL~pk~ggf~~a~~~~~~~~~~ 222 (301)
T PRK14014 144 YSKAYLAKNPELKGKDLETTRRACEKFKRMP-TTIVNFVEGTRFTPEKHQQQQSPYQHLLKPKAGGIAFALNAMGEQFDG 222 (301)
T ss_pred cchhhhhhchhhhhhHHHHHHHHHHHHhcCC-cEEEEeccceecCcccccccCCCcccccCCCCccHHHHHHhhhccCCE
Confidence 865332 233445555555433 48999999999643 379999999664 2 268
Q ss_pred eeEEEEEccCCCCCCCCCCccHHHHHHHHhccccceEEEEEecccCCCcccccCHHHHHHHHHHHHHHh
Q 008641 279 IQPVIVRYPHVHFDQSWGDVSLGKLMFRMFTQFHNFMEVEYLPVVFPSDNQKENALRFAERTSHAMASA 347 (558)
Q Consensus 279 I~Pv~i~y~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~v~~l~pi~~~~~~~~~~~~~~~~v~~~i~~~ 347 (558)
|+||+|.|++.. + +++..+.. ......+.|+..|.-+....+..+..++.+++++++.+.
T Consensus 223 I~dvti~y~~~~--~-----~~~~~~~g--~~~~v~v~i~~~pi~~~~~~~y~~d~~~~~~~~~Wl~~~ 282 (301)
T PRK14014 223 LLDVTIVYPDGR--P-----SFWDLLSG--RVKKIVVHVRLLPIPEELIGDYFNDKEFRRRFQQWLNQL 282 (301)
T ss_pred EEEEEEEeCCCC--C-----CHHHhhcC--CccEEEEEEEEEEcccccccccccChHHHHHHHHHHHHH
Confidence 999999998631 1 11211111 112344455555432222223345567777777777776
No 11
>PLN02588 glycerol-3-phosphate acyltransferase
Probab=99.92 E-value=4.2e-24 Score=216.92 Aligned_cols=194 Identities=19% Similarity=0.219 Sum_probs=148.4
Q ss_pred HHHhhCeEEEEEccccCC---CCCCCEEEeCCCCchhHHHHhhhccc---ceeeccccCCCCHHHHHHHhcceEEEecCC
Q 008641 155 ILFSFGYHWIRRKGKPAP---RQIAPIVVSNHISYIEPIFFFYELFP---TIVASESHDSIPFVGTIIRAMQVIYVDRFS 228 (558)
Q Consensus 155 ~~~~~g~~~~~~~g~~~~---~~~~~iivsNH~S~~D~~~l~~~~~p---~~v~k~~l~~~p~~g~~~~~~g~i~v~r~~ 228 (558)
++.++|++ +.+.|...+ .++|+|+||||+|++|++++...+.+ .++ .+.+|+++|++..++.++|+|++
T Consensus 305 ~~~~~Gvr-l~v~g~~p~~~~~~~gvI~V~NH~S~LDPi~L~~Al~rr~I~~m----tFsip~lg~lL~~i~ti~VdRdr 379 (525)
T PLN02588 305 FLAFSGIH-LTLTVNDLISSDRKKGCLFVCNHRTLLDPLYISYALRKKNIKAV----TYSLSRLSELLAPIKTVRLTRDR 379 (525)
T ss_pred HHHHcCcE-EEEEeCCCCCCCCCCCEEEEECCcchhhHHHHHHHcccCcceEE----EEEhHHHHHHHHhcCceeecCCC
Confidence 45677887 566644332 34689999999999999999888742 233 35679999999999999999987
Q ss_pred ccchHHHHHHHHHHHhcCCCCeEEEeeCceecCCCcccccccccccCCCceeEEEEEccCCCCCC----CCCCccHHHHH
Q 008641 229 QSSRKNAVSEIKRKASCDRFPRVLLFPEGTTTNGKFLISFQLGAFIPAYPIQPVIVRYPHVHFDQ----SWGDVSLGKLM 304 (558)
Q Consensus 229 ~~~~~~~~~~~~~~l~~~~~~~l~iFPEGt~s~~~~ll~Fk~Gaf~~~~pI~Pv~i~y~~~~~~~----~w~~~~~~~~~ 304 (558)
..+. +.+.+.++.|+ ++|||||||++++.+++||.|+.....+||||+|+|....+.. .|. +...+
T Consensus 380 ~~D~----~aI~~LLk~Gd---lVIFPEGTRsr~g~LlrFk~l~A~la~~IVPVAI~~~~~~f~gtt~~g~k---~~D~~ 449 (525)
T PLN02588 380 VKDG----QAMEKLLSQGD---LVVCPEGTTCREPYLLRFSPLFSEVCDVIVPVAIDSHVTFFYGTTASGLK---AFDPI 449 (525)
T ss_pred cchH----HHHHHHHhCCC---EEEccCccccCCCcccChhhhHHHhcCceeeEEEEEeccccceeecCCCc---cccee
Confidence 5433 33455666665 7899999999999999999997777789999999997755432 221 11223
Q ss_pred HHHhccccceEEEEEecccCCCc----c---cccCHHHHHHHHHHHHHHhcCCcccCCchhhHHHHH
Q 008641 305 FRMFTQFHNFMEVEYLPVVFPSD----N---QKENALRFAERTSHAMASALNAVQTSHAYGDLMLLM 364 (558)
Q Consensus 305 ~~~~~~~~~~~~v~~l~pi~~~~----~---~~~~~~~~~~~v~~~i~~~l~~~~~~~~~~d~~~~~ 364 (558)
|. +..+...++|+|+++++... . .+++..++|++|+..|++.||..++.+|-.|++++.
T Consensus 450 ~f-l~nP~p~y~V~fL~~v~~~~e~~~~~p~~g~s~~evAn~VQ~~iA~~LG~e~T~~Tr~dkY~~L 515 (525)
T PLN02588 450 FF-LLNPFPSYTVQLLDPVSGSSSSTCQDPDNGKLKFEVANHVQHEIGNALGFECTNLTRRDKYLIL 515 (525)
T ss_pred EE-EecCCceEEEEEcCcCCchhhhcccCcccCCChHHHHHHHHHHHHHhhCceecccchhhhhhee
Confidence 33 45568889999999998521 2 157788999999999999999999999999987654
No 12
>cd07988 LPLAT_ABO13168-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ABO13168. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized phospholipid/glycerol acyltransferases such as the Acinetobacter baumannii ATCC 17978 locus ABO13168 putative acyltransferase, and similar proteins.
Probab=99.91 E-value=2e-24 Score=195.89 Aligned_cols=139 Identities=21% Similarity=0.237 Sum_probs=108.4
Q ss_pred HHHHhhCeEEEEEccccCCCCCCCEEEeCCCCchhHHHHhhhc-----ccceeeccccCCCCHHHHHHHhcceEEEecCC
Q 008641 154 CILFSFGYHWIRRKGKPAPRQIAPIVVSNHISYIEPIFFFYEL-----FPTIVASESHDSIPFVGTIIRAMQVIYVDRFS 228 (558)
Q Consensus 154 ~~~~~~g~~~~~~~g~~~~~~~~~iivsNH~S~~D~~~l~~~~-----~p~~v~k~~l~~~p~~g~~~~~~g~i~v~r~~ 228 (558)
.+++.+|++ + .|.....++++|+||||+|++|++++...+ ..+|++|+++++.|+ ||+++.+|.++|+|++
T Consensus 3 ~~~~~~g~~-~--~g~~p~~~~~~iiv~NH~S~~D~~~l~~~~~~~~~~~~~vak~~l~~~p~-g~~~~~~g~i~V~r~~ 78 (163)
T cd07988 3 LLLRLSGWR-I--EGEPPNKPKFVVIGAPHTSNWDFVLGLLAAFALGLKISFLGKHSLFKPPL-GPFMRWLGGIPVDRSR 78 (163)
T ss_pred eEEEecCEE-E--EeEcCCCCceEEEEECCCccHHHHHHHHHHHhcCCceEEEEEHHhhhCcH-HHHHHHcCCEEeEcCC
Confidence 345667754 3 444322246889999999999988876552 237899999999999 9999999999999987
Q ss_pred ccchHHHHHHHHHHHhcCCCCeEEEeeCceecCCCccccccccc----ccCCCceeEEEEEccCCCCCCCCCCccHHHHH
Q 008641 229 QSSRKNAVSEIKRKASCDRFPRVLLFPEGTTTNGKFLISFQLGA----FIPAYPIQPVIVRYPHVHFDQSWGDVSLGKLM 304 (558)
Q Consensus 229 ~~~~~~~~~~~~~~l~~~~~~~l~iFPEGt~s~~~~ll~Fk~Ga----f~~~~pI~Pv~i~y~~~~~~~~w~~~~~~~~~ 304 (558)
.. +.++.+.+.+++++..+++|||||||+.. .+||+|+ .++++||+||+|.|..
T Consensus 79 ~~---~~~~~~~~~l~~g~~~~l~IFPEGtR~~~---~~fk~G~~~lA~~~~~PIvPv~i~~~~---------------- 136 (163)
T cd07988 79 AG---GLVEQVVEEFRRREEFVLAIAPEGTRSKV---DKWKTGFYHIARGAGVPILLVYLDYKR---------------- 136 (163)
T ss_pred cc---cHHHHHHHHHHhCCCcEEEEeCCCCCCCC---cChhhHHHHHHHHcCCCEEEEEEecCc----------------
Confidence 43 45666777777655358999999999985 4799994 5699999999998652
Q ss_pred HHHhccccceEEEEEecccCCCcc
Q 008641 305 FRMFTQFHNFMEVEYLPVVFPSDN 328 (558)
Q Consensus 305 ~~~~~~~~~~~~v~~l~pi~~~~~ 328 (558)
.+|+||+||++.+.
T Consensus 137 ----------~~v~~g~pi~~~~~ 150 (163)
T cd07988 137 ----------KTVGIGPLFEPSGD 150 (163)
T ss_pred ----------EEEEECCcCcCCCC
Confidence 37899999998654
No 13
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.90 E-value=5e-23 Score=180.25 Aligned_cols=146 Identities=21% Similarity=0.362 Sum_probs=136.0
Q ss_pred cccccChHHHHHHHHHHHhhCCCCCCcccHHHHHHHh---ccCCcH-HHHHHHhhhcCCCCCceeHHHHHHHHHhhccCc
Q 008641 386 SIFHISSLEAVNFLEKFLSMNPDPSGCVKLLDFLSVL---RLKTCP-LSDEIFGFIDVDKNGSITFKQFLYASAHVMKLP 461 (558)
Q Consensus 386 ~~~~lt~~~~~~~~~~F~~~D~d~~G~Is~~ef~~~l---~~~~~~-~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~ 461 (558)
...+++.+++++++++|..+|+|++|.|+..||..++ |..+++ ++.+++..+|. +.+.|+|.||+.++.......
T Consensus 10 ~~~~~t~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~~ 88 (160)
T COG5126 10 TFTQLTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLKRG 88 (160)
T ss_pred hcccCCHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhccC
Confidence 3467999999999999999999999999999996665 777765 89999999999 999999999999999988877
Q ss_pred chhHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCcHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCcc
Q 008641 462 LFWQACELAFAECDPDGNGFISENQLEVTIRPAIPDLNKYEIDSLFRLFDSDGDGRVSRDDFICCLRKNPL 532 (558)
Q Consensus 462 ~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~~~~~ 532 (558)
..+++++.+|+.||+|++|+|+..|++.+++.+|+.+++++++++++.+|.|+||.|+|++|++.+...+.
T Consensus 89 ~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~~deev~~ll~~~d~d~dG~i~~~eF~~~~~~~~~ 159 (160)
T COG5126 89 DKEEELREAFKLFDKDHDGYISIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDGEIDYEEFKKLIKDSPT 159 (160)
T ss_pred CcHHHHHHHHHHhCCCCCceecHHHHHHHHHhhcccCCHHHHHHHHHhcCCCCCceEeHHHHHHHHhccCC
Confidence 77999999999999999999999999999999999999999999999999999999999999998877653
No 14
>cd07992 LPLAT_AAK14816-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown AAK14816-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized glycerol-3-phosphate acyltransferases such as the Plasmodium falciparum locus AAK14816 putative acyltransferase, and similar proteins.
Probab=99.90 E-value=3.2e-23 Score=195.90 Aligned_cols=174 Identities=20% Similarity=0.275 Sum_probs=132.9
Q ss_pred HHHHHHHhhCeEEEEEccccC-CCCCCCEEEeCCC-CchhHHHHhhhcc--cceeeccccCCCCHHHHHHHhcceEEEec
Q 008641 151 CSRCILFSFGYHWIRRKGKPA-PRQIAPIVVSNHI-SYIEPIFFFYELF--PTIVASESHDSIPFVGTIIRAMQVIYVDR 226 (558)
Q Consensus 151 ~~r~~~~~~g~~~~~~~g~~~-~~~~~~iivsNH~-S~~D~~~l~~~~~--p~~v~k~~l~~~p~~g~~~~~~g~i~v~r 226 (558)
+.+.++++.+. .+++.|.++ +.++|+|+||||+ |++|++++..... .+++++++++..|++|++++.+|.++|+|
T Consensus 4 ~~~~~~~~~~~-~v~v~G~e~lp~~~~~I~v~NH~~s~~D~~~l~~~~~~~~~~v~~~~~~~~p~~~~~~~~~g~ipI~r 82 (203)
T cd07992 4 LSRVILRIYFR-RITVVGRENVPKDGPVIFLGNHPNALIDPLLLAATLRRPVRFLAKADLFKNPLIGWLLESFGAIPVYR 82 (203)
T ss_pred ehhehhhhEee-eeEEECCccCCCCCCEEEEeCCccchhhHHHHHHhcCCCcEEEEEhhhccchHHHHHHHHcCceEeEc
Confidence 34444445443 378888776 4568899999999 6899888876643 37899999999999999999999999999
Q ss_pred CCccc--------hHHHHHHHHHHHhcCCCCeEEEeeCceecCCCcccccccccc----------cCCCceeEEEEEccC
Q 008641 227 FSQSS--------RKNAVSEIKRKASCDRFPRVLLFPEGTTTNGKFLISFQLGAF----------IPAYPIQPVIVRYPH 288 (558)
Q Consensus 227 ~~~~~--------~~~~~~~~~~~l~~~~~~~l~iFPEGt~s~~~~ll~Fk~Gaf----------~~~~pI~Pv~i~y~~ 288 (558)
.+... ..++++.+.+.+++|. +++||||||++.++.+.+||+|++ .+++||+||+|.|..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~l~~G~--~l~IFPEGtr~~~~~~~~fk~G~~~lA~~a~~~~~~~vpIvPv~i~~~~ 160 (203)
T cd07992 83 PKDLARGGIGKISNAAVFDAVGEALKAGG--AIGIFPEGGSHDRPRLLPLKAGAARMALEALEAGQKDVKIVPVGLNYED 160 (203)
T ss_pred CCCcccccccchhHHHHHHHHHHHHhCCC--EEEEeCCCCCCCCCCccCcCccHHHHHHHHHhcCCCCCeEEeeeEEeCC
Confidence 76532 3677889999999998 999999999999999999999965 369999999999875
Q ss_pred CCCCCCCCCccHHHHHHHHhccccceEEEEEecccCCCcccc-cCHHHHHHHHHHHHHH
Q 008641 289 VHFDQSWGDVSLGKLMFRMFTQFHNFMEVEYLPVVFPSDNQK-ENALRFAERTSHAMAS 346 (558)
Q Consensus 289 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~v~~l~pi~~~~~~~-~~~~~~~~~v~~~i~~ 346 (558)
.. .+...+.|.+|+|+.+++... ++..+..+.+.+.+.+
T Consensus 161 ~~-------------------~~~~~i~i~~g~pi~~~~~~~~~~~~~~~~~~~~~~~~ 200 (203)
T cd07992 161 KS-------------------RFRSRVLVEFGKPISVSAFEEAEASRDVEKKLINQLEA 200 (203)
T ss_pred CC-------------------CCCCeEEEEECCCcccccccccccchhHHHHHHHHHHH
Confidence 31 125678999999999865432 2333333344444433
No 15
>COG0204 PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism]
Probab=99.90 E-value=1.6e-22 Score=198.59 Aligned_cols=176 Identities=24% Similarity=0.358 Sum_probs=135.4
Q ss_pred HHHHHHHHHHHHhhCeEEEEEccccCCCC-CCCEEEeCCCCchhHHHHhhhcccc----eeeccccCCCCHHHHHHHhcc
Q 008641 146 WVTRVCSRCILFSFGYHWIRRKGKPAPRQ-IAPIVVSNHISYIEPIFFFYELFPT----IVASESHDSIPFVGTIIRAMQ 220 (558)
Q Consensus 146 ~~~~~~~r~~~~~~g~~~~~~~g~~~~~~-~~~iivsNH~S~~D~~~l~~~~~p~----~v~k~~l~~~p~~g~~~~~~g 220 (558)
.+.+.+.+.+++.++++ +++.|.++.++ +++|++|||+|++|++++.....+. |++|++++++|++|++++.+|
T Consensus 35 ~~~~~~~~~~~~~~~~r-~~v~G~e~lp~~~~~ivvaNH~S~~D~~~l~~~~~~~~~~~f~~k~~l~~~p~~g~~~~~~~ 113 (255)
T COG0204 35 RWLRFLVLLLLLLFGLR-VEVEGLENLPKGGPALVVANHQSFLDPLLLSLALPRRGPVRFVAKKELFKVPLLGWLLRLLG 113 (255)
T ss_pred HHHHHHHHHHHHHhCce-EEEEeeecCCCCCCEEEEECchhhhhHHHHhhhcCCCcceEEEeehhhccCchHHHHHHHcC
Confidence 34455555666777776 89999888665 8999999999999999988777655 999999999999999999999
Q ss_pred eEEEecCCccchHHHHHHHHHHHhcC-CCCeEEEeeCceecCC-Ccccccccc----cccCCCceeEEEEEccCCCCCCC
Q 008641 221 VIYVDRFSQSSRKNAVSEIKRKASCD-RFPRVLLFPEGTTTNG-KFLISFQLG----AFIPAYPIQPVIVRYPHVHFDQS 294 (558)
Q Consensus 221 ~i~v~r~~~~~~~~~~~~~~~~l~~~-~~~~l~iFPEGt~s~~-~~ll~Fk~G----af~~~~pI~Pv~i~y~~~~~~~~ 294 (558)
+++++|.++.. ..+....+.++++ . .++|||||||+++ ..+.+||.| |...++||+||++.|........
T Consensus 114 ~i~v~r~~~~~--~~~~~~~~~~~~~g~--~l~iFPEGtr~~~~~~~~~~k~g~~~~a~~~~~PivPv~i~g~~~~~~~~ 189 (255)
T COG0204 114 AIPVDRENPDD--ETLRAAVARLKAGGR--SLVIFPEGTRSRGGEELLPFKRGAARLALEAGVPIVPVAIVGAEELFPSL 189 (255)
T ss_pred eeEecCCCCcH--HHHHHHHHHHHhCCc--EEEECCCcCcCCCccccCCCcchHHHHHHHcCCCEEeEEEeCCcccccCC
Confidence 99999998664 5666667766664 5 9999999999997 559999999 44589999999999987543221
Q ss_pred CCCccHHHHHHHHhccccceEEEEEecccCCCcccccCHHHHHHHHHH
Q 008641 295 WGDVSLGKLMFRMFTQFHNFMEVEYLPVVFPSDNQKENALRFAERTSH 342 (558)
Q Consensus 295 w~~~~~~~~~~~~~~~~~~~~~v~~l~pi~~~~~~~~~~~~~~~~v~~ 342 (558)
. ...+.+++++|+..............+.+.+
T Consensus 190 ----~------------~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~ 221 (255)
T COG0204 190 ----K------------KGKVKVRIGPPIDISALPEPLLPELAEAVEQ 221 (255)
T ss_pred ----C------------ceeEEEEecCCcCccccchhhhhhHHHHHHH
Confidence 0 1127899999998765543333333333333
No 16
>PLN02783 diacylglycerol O-acyltransferase
Probab=99.89 E-value=1.4e-22 Score=201.66 Aligned_cols=201 Identities=15% Similarity=0.156 Sum_probs=143.1
Q ss_pred HHHHHHHHHHHHhhCeEEEEEccccC-CCCCCCEEEeCCCCchhHHHHhh----hccc----ceeeccccCCCCHHHHHH
Q 008641 146 WVTRVCSRCILFSFGYHWIRRKGKPA-PRQIAPIVVSNHISYIEPIFFFY----ELFP----TIVASESHDSIPFVGTII 216 (558)
Q Consensus 146 ~~~~~~~r~~~~~~g~~~~~~~g~~~-~~~~~~iivsNH~S~~D~~~l~~----~~~p----~~v~k~~l~~~p~~g~~~ 216 (558)
.+.+++++....++|++ +.++|.++ ++++++|+++||+|.+|...+.. .+.| ++++|++++++|++|+++
T Consensus 72 ~~~r~i~~~~~~~~~~~-v~v~g~e~l~~~~~~I~~~nH~S~ldi~~~~~~~~~~~~p~~~~~~lak~~lf~iP~~g~~~ 150 (315)
T PLN02783 72 KIARFICKYACAYFPVR-LHVEDEEAFDPNRAYVFGYEPHSVLPIGVIALADLSGFLPLPKIRALASSAVFYTPFLRHIW 150 (315)
T ss_pred HHHHHHHHHHHHhcCeE-EEEEchhhCCCCCCEEEEECCCcchhhHHHhhhhhhhccCCCchHHHhhhhhccCcHHHHHH
Confidence 45566677777788986 78888766 56788999999999999655322 1122 679999999999999999
Q ss_pred HhcceEEEecCCccchHHHHHHHHHHHhcCCCCeEEEeeCceec-----CCC--cccccccccc----cCCCceeEEEEE
Q 008641 217 RAMQVIYVDRFSQSSRKNAVSEIKRKASCDRFPRVLLFPEGTTT-----NGK--FLISFQLGAF----IPAYPIQPVIVR 285 (558)
Q Consensus 217 ~~~g~i~v~r~~~~~~~~~~~~~~~~l~~~~~~~l~iFPEGt~s-----~~~--~ll~Fk~Gaf----~~~~pI~Pv~i~ 285 (558)
+.+|.++|+|++ +.+.+++|. +++||||||+. .++ ..++||+|++ ++++||+||++.
T Consensus 151 ~~~G~ipv~R~~----------~~~~Lk~G~--sv~IfPeGtre~~~~~~~~~~~~~~~k~G~~~lA~~~g~PIVPv~i~ 218 (315)
T PLN02783 151 TWLGLDPASRKN----------FTSLLKAGY--SCIIVPGGVQECLYMEHGSEVAYLKSRKGFVKIAMETGAPLVPVFCF 218 (315)
T ss_pred HHcCCeEEcHHH----------HHHHHhCCC--EEEEEcCCchhhcccCCCccccccCCCCcHHHHHHHcCCCEEEEEEE
Confidence 999999999973 445677887 99999999984 232 3468999944 599999999999
Q ss_pred ccCCCCCCCCCCc-cHHHHHHHHh--------------ccccceEEEEEecccCCCcccccC---HHHHHHHHHHHHHHh
Q 008641 286 YPHVHFDQSWGDV-SLGKLMFRMF--------------TQFHNFMEVEYLPVVFPSDNQKEN---ALRFAERTSHAMASA 347 (558)
Q Consensus 286 y~~~~~~~~w~~~-~~~~~~~~~~--------------~~~~~~~~v~~l~pi~~~~~~~~~---~~~~~~~v~~~i~~~ 347 (558)
+....+. .|... .+...+.+.+ .+++..+.|.+|+||+.+..++.+ .+++.+++.++|++.
T Consensus 219 G~~~~~~-~~~~~~~~~~~l~r~~~~~p~~~wg~~~~piP~~~~i~vvvG~PI~v~~~~~~~~e~v~~~~~~~~~al~~L 297 (315)
T PLN02783 219 GQTRAYK-WWKPGGPLVPKLSRAIGFTPIVFWGRYGSPIPHRTPMHVVVGKPIEVKKNPQPSQEEVAEVLEQFVEALQDL 297 (315)
T ss_pred Cchhhhh-hhcCCccHHHHHHHhcCcCceeeecccCcccCCCceEEEEecCCccCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 8654332 23222 2222222211 123578999999999976543333 445666677777777
Q ss_pred cCCcccCCchhhH
Q 008641 348 LNAVQTSHAYGDL 360 (558)
Q Consensus 348 l~~~~~~~~~~d~ 360 (558)
+......+.++|.
T Consensus 298 ~~~~k~~~g~~~~ 310 (315)
T PLN02783 298 FEKHKARAGYGDL 310 (315)
T ss_pred HHHHHHhcCCCCc
Confidence 7666666666664
No 17
>cd07993 LPLAT_DHAPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as dihydroxyacetone phosphate acyltransferase (DHAPAT, also known as 1 glycerol-3-phosphate O-acyltransferase 1) and similar proteins.
Probab=99.88 E-value=5.8e-23 Score=194.20 Aligned_cols=150 Identities=18% Similarity=0.274 Sum_probs=121.3
Q ss_pred CCCEEEeCCCCchhHHHHhhhc-----ccceeeccccCCCCHHHHHHHhcceEEEecCCccch--H-HHHHHHHHHHhcC
Q 008641 175 IAPIVVSNHISYIEPIFFFYEL-----FPTIVASESHDSIPFVGTIIRAMQVIYVDRFSQSSR--K-NAVSEIKRKASCD 246 (558)
Q Consensus 175 ~~~iivsNH~S~~D~~~l~~~~-----~p~~v~k~~l~~~p~~g~~~~~~g~i~v~r~~~~~~--~-~~~~~~~~~l~~~ 246 (558)
+++|+||||+|++|++++.+.+ ...+++++++...|++||+++.+|+++|+|+...+. . ...+.+.+.+++|
T Consensus 22 ~~~i~v~NH~S~lD~~~l~~~~~~~~~~~~~va~~e~~~~~~~g~~l~~~g~i~I~R~~~~~~~~~~~~~~~~~~~l~~g 101 (205)
T cd07993 22 HPVVLLPTHRSYLDFLLLSFILFSLGLPLPHIAAGENLNIPILGTLLRRLGAFFIRRSFGKDPLYRAVLQEYVQELLKNG 101 (205)
T ss_pred CCEEEEecCcchhHHHHHHHHHHHCCCCCcEEEEchhhCcHHHHHHHHHCCCEEEecCCCccHHHHHHHHHHHHHHHhCC
Confidence 6889999999999988887764 236788888888999999999999999999865322 2 3345577788888
Q ss_pred CCCeEEEeeCceecCCCccccccccccc-----------CCCceeEEEEEccCCCCCCCC-----C------CccHHHHH
Q 008641 247 RFPRVLLFPEGTTTNGKFLISFQLGAFI-----------PAYPIQPVIVRYPHVHFDQSW-----G------DVSLGKLM 304 (558)
Q Consensus 247 ~~~~l~iFPEGt~s~~~~ll~Fk~Gaf~-----------~~~pI~Pv~i~y~~~~~~~~w-----~------~~~~~~~~ 304 (558)
. +|+||||||||.++.+.+||.|++. .++||+||+|.|........| + ....+.+.
T Consensus 102 ~--~l~iFPEGtrs~~g~~~~~k~G~~~~a~~~~~~~~~~~v~IvPV~i~Y~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 179 (205)
T cd07993 102 Q--PLEFFIEGTRSRTGKLLPPKLGLLSVVVEAYLKGSVPDVLIVPVSISYDRVLEEELYAEELLGPPKPKESLSGLLGA 179 (205)
T ss_pred c--eEEEEcCCCCCCCCCccchHHHHHHHHHHHHhhCCCCCeEEEEeEEeeCcccchHHHHHHHcCCCCCCccHHHHHHH
Confidence 7 9999999999999999999999663 389999999999875333333 1 22466777
Q ss_pred HHHhccccceEEEEEecccCCC
Q 008641 305 FRMFTQFHNFMEVEYLPVVFPS 326 (558)
Q Consensus 305 ~~~~~~~~~~~~v~~l~pi~~~ 326 (558)
++.+...++.+.|++++|++.+
T Consensus 180 ~~~l~~~~g~v~v~~~~Pi~~~ 201 (205)
T cd07993 180 SKILRENFGRIRVDFGEPISLR 201 (205)
T ss_pred HHHhhccCCeEEEECCCCcCHH
Confidence 8888888999999999999763
No 18
>cd07986 LPLAT_ACT14924-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ACT14924. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized phospholipid/glycerol acyltransferases such as the Pectobacterium carotovorum subsp. carotovorum PC1 locus ACT14924 putative acyltransferase, and similar proteins.
Probab=99.88 E-value=2.3e-22 Score=190.79 Aligned_cols=174 Identities=14% Similarity=0.136 Sum_probs=130.6
Q ss_pred EEEEccccCC-CCCCCEEEeCCCC-chhHHHHhhhc---c--cceeeccccCCCCHHHHHHHhcceEEEecCCcc----c
Q 008641 163 WIRRKGKPAP-RQIAPIVVSNHIS-YIEPIFFFYEL---F--PTIVASESHDSIPFVGTIIRAMQVIYVDRFSQS----S 231 (558)
Q Consensus 163 ~~~~~g~~~~-~~~~~iivsNH~S-~~D~~~l~~~~---~--p~~v~k~~l~~~p~~g~~~~~~g~i~v~r~~~~----~ 231 (558)
++++.|.++. .++++|+||||+| ++|++++...+ . .++++|.++++.|+++++ .++|+|.+.+ +
T Consensus 9 ~v~v~G~e~lp~~g~~iiv~NH~s~~~D~~~l~~~~~~~~~~~~~lak~~l~~~p~l~~~-----~i~v~r~~~~~~~~~ 83 (210)
T cd07986 9 EVDVSGLENIPKDGPVVIVANHPFGILDGLILADLLGSVRPDVRILANQLLSKIPELRDL-----FIPVDPLEGRAALAK 83 (210)
T ss_pred EEecCchhcCCCCCCEEEEEcCCccchHHHHHHHHHHHhCCCeEEEeHHhhhhCcchHhh-----EEeccCCCCcchhhh
Confidence 3788898875 4678999999987 59988776543 2 268999999999998876 5899998764 4
Q ss_pred hHHHHHHHHHHHhcCCCCeEEEeeCceecCCCc------ccccccccc----cCCCceeEEEEEccCCCC----CCCCCC
Q 008641 232 RKNAVSEIKRKASCDRFPRVLLFPEGTTTNGKF------LISFQLGAF----IPAYPIQPVIVRYPHVHF----DQSWGD 297 (558)
Q Consensus 232 ~~~~~~~~~~~l~~~~~~~l~iFPEGt~s~~~~------ll~Fk~Gaf----~~~~pI~Pv~i~y~~~~~----~~~w~~ 297 (558)
..++++++.+.+++|+ +++|||||||+..+. +.+||+|++ .+++||+||+|.+.+... ...|+.
T Consensus 84 ~~~~~~~~~~~L~~G~--~l~IFPEGtrs~~~~~~g~~~~~~fk~G~~~lA~~~~~pIvPv~i~g~~~~~~~~~~~~~~~ 161 (210)
T cd07986 84 NRESLREALRHLKNGG--ALIIFPAGRVSTASPPFGRVSDRPWNPFVARLARKAKAPVVPVYFSGRNSRLFYLAGLIHPT 161 (210)
T ss_pred hHHHHHHHHHHHhCCC--EEEEECCcccccccccCCccccCCccHHHHHHHHHHCCCEEEEEEeeeCcHHHHHHHccCHH
Confidence 5778899999999998 999999999997643 689999955 489999999998865311 012221
Q ss_pred ccHHHHHHHHhccccceEEEEEecccCCCccc-ccCHHHHHHHHHHH
Q 008641 298 VSLGKLMFRMFTQFHNFMEVEYLPVVFPSDNQ-KENALRFAERTSHA 343 (558)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~v~~l~pi~~~~~~-~~~~~~~~~~v~~~ 343 (558)
.......+..+...+..++|++|+||++++.. .++.+++++.+|+.
T Consensus 162 ~~~~~~~~~~~~~~~~~v~v~~g~pI~~~~~~~~~~~~~l~~~~~~~ 208 (210)
T cd07986 162 LRTLLLPRELLNKRGKTIRIRVGRPIPPEELARFEDAEELADFLRLH 208 (210)
T ss_pred HHHHHHHHHHHHhCCCEEEEEeCCcCCHHHHhcCCCHHHHHHHHHHh
Confidence 11111222333335788999999999986653 46899999999873
No 19
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=99.86 E-value=5.6e-21 Score=215.15 Aligned_cols=187 Identities=18% Similarity=0.227 Sum_probs=143.4
Q ss_pred EEEEccccC-CCCCCCEEEeCCCCchhHHHHhhhcc--cceeeccccCCCCHHHHHHHhcceEEEecCCccchHHHHHHH
Q 008641 163 WIRRKGKPA-PRQIAPIVVSNHISYIEPIFFFYELF--PTIVASESHDSIPFVGTIIRAMQVIYVDRFSQSSRKNAVSEI 239 (558)
Q Consensus 163 ~~~~~g~~~-~~~~~~iivsNH~S~~D~~~l~~~~~--p~~v~k~~l~~~p~~g~~~~~~g~i~v~r~~~~~~~~~~~~~ 239 (558)
++++.|.++ ++++++|+||||+|++|++++...+. +.|++|+++.+.|++|++++..|.++|+|++. ..++.+
T Consensus 15 ~~~v~g~~~~~~~~~~i~v~NH~s~~D~~~l~~~~~~~~~~~~k~~l~~~~~~~~~~~~~~~i~v~r~~~----~~~~~~ 90 (718)
T PRK08043 15 RVRVTGDTQALKGERVLITPNHVSFLDGILLALFLPVRPVFAVYTSISQQWYMRWLKPYIDFVPLDPTKP----MAIKHL 90 (718)
T ss_pred EEEEEccccCCCCCCEEEEECCCchHHHHHHHHhCCCCeEEEEeHHHhhhHHHHHHHHhCCEEEecCCCH----HHHHHH
Confidence 356777665 55678999999999999888887664 35899999999999999999999999999863 457777
Q ss_pred HHHHhcCCCCeEEEeeCceecCCCcccccccccc----cCCCceeEEEEEccCCCCCCCCCCccHHHHHHHHhccccceE
Q 008641 240 KRKASCDRFPRVLLFPEGTTTNGKFLISFQLGAF----IPAYPIQPVIVRYPHVHFDQSWGDVSLGKLMFRMFTQFHNFM 315 (558)
Q Consensus 240 ~~~l~~~~~~~l~iFPEGt~s~~~~ll~Fk~Gaf----~~~~pI~Pv~i~y~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ 315 (558)
.+.+++|. +|+|||||||+.++.+.+||+|++ +.++||+||+|.+.+... +..... .+ + ......+
T Consensus 91 ~~~l~~g~--~~~iFPEGtr~~~~~~~~~k~G~~~~a~~~~~pivPv~i~g~~~~~---~~~~~~--~~-~--~~~~~~i 160 (718)
T PRK08043 91 VRLVEQGR--PVVIFPEGRITVTGSLMKIYDGAGFVAAKSGATVIPVRIEGAELTH---FSRLKG--LV-K--RRLFPQI 160 (718)
T ss_pred HHHHhCCC--EEEEeCCCccCCCCCccCcchHHHHHHHHCCCCEEEEEEECCccCc---ccccCC--cc-c--cccCCce
Confidence 78888888 999999999999999999999964 589999999999865311 111000 00 0 0113468
Q ss_pred EEEEecccCC----CcccccCHHHHHHHHHHHHHHhcCCcccCCchhhHHHH
Q 008641 316 EVEYLPVVFP----SDNQKENALRFAERTSHAMASALNAVQTSHAYGDLMLL 363 (558)
Q Consensus 316 ~v~~l~pi~~----~~~~~~~~~~~~~~v~~~i~~~l~~~~~~~~~~d~~~~ 363 (558)
.|++++|++. ...+.++.+.+++.+++.|.+.+.......+..|....
T Consensus 161 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~ 212 (718)
T PRK08043 161 TLHILPPTQLPMPDAPRARDRRKLAGEMLHQIMMEARMAVRPRETLYEALLS 212 (718)
T ss_pred EEEecCcccCCCCCCccHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHH
Confidence 8999998653 23344567789999999999999888777777665543
No 20
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.86 E-value=1.4e-20 Score=168.96 Aligned_cols=141 Identities=25% Similarity=0.380 Sum_probs=128.1
Q ss_pred cChHHHHHHHHHHHhhCCCCCCcccHHHHHHHh---ccCCcH-HHHHHHhhhcCCCCCceeHHHHHHHHHhhccCcch--
Q 008641 390 ISSLEAVNFLEKFLSMNPDPSGCVKLLDFLSVL---RLKTCP-LSDEIFGFIDVDKNGSITFKQFLYASAHVMKLPLF-- 463 (558)
Q Consensus 390 lt~~~~~~~~~~F~~~D~d~~G~Is~~ef~~~l---~~~~~~-~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~~-- 463 (558)
++.++...++++|..+|+|++|+|+..|+..++ |..+++ ++..+++.+|.+++|.|+++||+.++.........
T Consensus 2 ~~~~~~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~ 81 (151)
T KOG0027|consen 2 LSEEQILELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEE 81 (151)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhccccccc
Confidence 567888999999999999999999999996554 667665 89999999999999999999999999877655443
Q ss_pred --hHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCcHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC
Q 008641 464 --WQACELAFAECDPDGNGFISENQLEVTIRPAIPDLNKYEIDSLFRLFDSDGDGRVSRDDFICCLRKN 530 (558)
Q Consensus 464 --~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~~~ 530 (558)
.++++.+|+.||.|++|+|+.+||+.+|..+|.+.+.++++.+++.+|.|+||.|+|+||++++...
T Consensus 82 ~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~~~~e~~~mi~~~d~d~dg~i~f~ef~~~m~~~ 150 (151)
T KOG0027|consen 82 ASSEELKEAFRVFDKDGDGFISASELKKVLTSLGEKLTDEECKEMIREVDVDGDGKVNFEEFVKMMSGK 150 (151)
T ss_pred ccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCcCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHhcC
Confidence 4599999999999999999999999999999999999999999999999999999999999988753
No 21
>PLN02510 probable 1-acyl-sn-glycerol-3-phosphate acyltransferase
Probab=99.83 E-value=1.3e-19 Score=183.42 Aligned_cols=128 Identities=16% Similarity=0.150 Sum_probs=102.0
Q ss_pred HHHhhCeEEEEEccccCCCCCCCEEEeCCCCchhHHHHhhhc-------ccceeeccccCCCCHHHHHHHhcceEEEecC
Q 008641 155 ILFSFGYHWIRRKGKPAPRQIAPIVVSNHISYIEPIFFFYEL-------FPTIVASESHDSIPFVGTIIRAMQVIYVDRF 227 (558)
Q Consensus 155 ~~~~~g~~~~~~~g~~~~~~~~~iivsNH~S~~D~~~l~~~~-------~p~~v~k~~l~~~p~~g~~~~~~g~i~v~r~ 227 (558)
+-++.|++ +.+.|+..+.++++|++|||+|++|+++++... ..++++|+++.++|++||+++.+|+|+|+|+
T Consensus 73 ~e~~~gvk-v~v~Ge~l~~~~~~IiiaNH~S~~D~l~l~~l~~r~~~~~~~kfv~K~eL~~iP~~Gw~~~~~g~I~v~R~ 151 (374)
T PLN02510 73 FEKINKTK-VVFSGDKVPPEERVLLIANHRTEVDWMYLWDLALRKGCLGYIKYVLKSSLMKLPVFGWAFHIFEFIPVERK 151 (374)
T ss_pred HHHhcCeE-EEEEeecCCCCCcEEEEECCCchHHHHHHHHHHHhcCCCcccEEEEeHHHhhchHHHHHHHHcCCeeeeCC
Confidence 33457876 788896556678899999999999988876543 1378999999999999999999999999998
Q ss_pred CccchHHHHHHHHHHHhc-CCCCeEEEeeCceecCCCcccccccccccCCCceeEEEE
Q 008641 228 SQSSRKNAVSEIKRKASC-DRFPRVLLFPEGTTTNGKFLISFQLGAFIPAYPIQPVIV 284 (558)
Q Consensus 228 ~~~~~~~~~~~~~~~l~~-~~~~~l~iFPEGt~s~~~~ll~Fk~Gaf~~~~pI~Pv~i 284 (558)
+..+. +.++++.+.+++ +.+.+++|||||||+..+....++..|.+.|+||+.-++
T Consensus 152 ~~~D~-~~l~~~l~~lk~~~~~~~LvIFPEGTR~t~~~~~~s~~~A~k~glPil~~vL 208 (374)
T PLN02510 152 WEVDE-PNIRQMLSSFKDPRDPLWLALFPEGTDYTEAKCQRSQKFAAEHGLPILNNVL 208 (374)
T ss_pred ccccH-HHHHHHHHHHhccCCCcEEEEeCCcCCCCccccchHHHHHHHcCCCcceeEE
Confidence 76543 556666666664 333589999999999887777788888888998887776
No 22
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.83 E-value=3.4e-19 Score=211.42 Aligned_cols=169 Identities=18% Similarity=0.173 Sum_probs=129.7
Q ss_pred EEEEccccC-CCCCCCEEEeCCCCchhHHHHhhhccc--ceeeccccCCCCHHHHHHHhcceEEEecCCccchHHHHHHH
Q 008641 163 WIRRKGKPA-PRQIAPIVVSNHISYIEPIFFFYELFP--TIVASESHDSIPFVGTIIRAMQVIYVDRFSQSSRKNAVSEI 239 (558)
Q Consensus 163 ~~~~~g~~~-~~~~~~iivsNH~S~~D~~~l~~~~~p--~~v~k~~l~~~p~~g~~~~~~g~i~v~r~~~~~~~~~~~~~ 239 (558)
++++.|.++ +.++++|++|||+|++|++++...+.. +|++|++++++|++|++++.+|+|+|+|++ .++.++.+
T Consensus 428 ~~~v~g~e~lp~~~~~i~~~nH~s~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~r~~---~~~~~~~~ 504 (1146)
T PRK08633 428 RLRVEGRENIPAKGGALLLGNHVSWIDWALLQAASPRPIRFVMERSIYEKWYLKWFFKLFGVIPISSGG---SKESLEFI 504 (1146)
T ss_pred EEEEECCcCCCCCCCEEEEECCCchHHHHHHHHHcCCCeEEEeeHHhhhChhHHHHHHHCCEEEecCCC---hHHHHHHH
Confidence 368888877 457889999999999998887776542 689999999999999999999999999986 46778888
Q ss_pred HHHHhcCCCCeEEEeeCceecCCCcccccccccc----cCCCceeEEEEEccCCCCCCCCCCccHHHHHHHHhccccceE
Q 008641 240 KRKASCDRFPRVLLFPEGTTTNGKFLISFQLGAF----IPAYPIQPVIVRYPHVHFDQSWGDVSLGKLMFRMFTQFHNFM 315 (558)
Q Consensus 240 ~~~l~~~~~~~l~iFPEGt~s~~~~ll~Fk~Gaf----~~~~pI~Pv~i~y~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ 315 (558)
.+.+++|+ +|+|||||||+.++.+.+||+|++ +.++||+||+|.+...... .+....+. ++.....+..+
T Consensus 505 ~~~l~~g~--~~~ifPeGt~~~~~~~~~~~~g~~~~a~~~~~~i~pv~~~g~~~~~~-~~~~~~~~---~~~~~~~~~~v 578 (1146)
T PRK08633 505 RKALDDGE--VVCIFPEGAITRNGQLNEFKRGFELIVKGTDVPIIPFYIRGLWGSIF-SRASGKFL---WRWPTRIPYPV 578 (1146)
T ss_pred HHHHhCCC--EEEEECCcCCCCCCCccchhHHHHHHHHHCCCCEEEEEEeccccccc-cccccccc---ccccCCCCceE
Confidence 89999998 999999999999999999999954 5899999999987532110 01111111 11223346789
Q ss_pred EEEEecccCCCcccccCHHHHHHHHHHHH
Q 008641 316 EVEYLPVVFPSDNQKENALRFAERTSHAM 344 (558)
Q Consensus 316 ~v~~l~pi~~~~~~~~~~~~~~~~v~~~i 344 (558)
+|+|++||.+. ...+++.+.+++..
T Consensus 579 ~v~~~~pi~~~----~~~~~~~~~~~~l~ 603 (1146)
T PRK08633 579 TVAFGKPMPAH----STAHEVKQAVFELS 603 (1146)
T ss_pred EEEECCCcCcc----cCHHHHHHHHHHHH
Confidence 99999999874 24455555555444
No 23
>PRK03355 glycerol-3-phosphate acyltransferase; Validated
Probab=99.83 E-value=4.5e-20 Score=200.29 Aligned_cols=178 Identities=15% Similarity=0.127 Sum_probs=128.3
Q ss_pred CCCCCCEEEeCCCCchhHHHHhhhcc------cceeeccccCCCCHHHHHHHhcceEEEecCCcc--chHHHHHHHHHHH
Q 008641 172 PRQIAPIVVSNHISYIEPIFFFYELF------PTIVASESHDSIPFVGTIIRAMQVIYVDRFSQS--SRKNAVSEIKRKA 243 (558)
Q Consensus 172 ~~~~~~iivsNH~S~~D~~~l~~~~~------p~~v~k~~l~~~p~~g~~~~~~g~i~v~r~~~~--~~~~~~~~~~~~l 243 (558)
..++++|+|+||+|++|++++.+.+. |.++++.++ ..|++|++++.+|.+||+|+... ....++++..+.+
T Consensus 264 ~~~~~vV~vpNHrS~lD~lll~~~l~~~gl~~~~i~Ag~~L-~~~~lG~llr~~Ga~fIrR~~~~~~ly~~vl~eyi~~L 342 (783)
T PRK03355 264 LEEHPAVLLFSHRSYIDGLVVPVAMQENRLPPVHVFGGINL-SFGPMGPIMRRSGMIFIRRNIGDDPLYKYVLREYVGYL 342 (783)
T ss_pred cCCCCEEEEECCCcchHHHHHHHHHhhcCCCCcEEEeHHHh-ccHHHHHHHHHcCcEEecCCCCchHHHHHHHHHHHHHH
Confidence 45678999999999999988877653 466777777 57889999999999999997643 3356777777766
Q ss_pred h-cCCCCeEEEeeCceecCCCcccccccccc-----------cCCCceeEEEEEccCCCCCCCC-----C----Ccc---
Q 008641 244 S-CDRFPRVLLFPEGTTTNGKFLISFQLGAF-----------IPAYPIQPVIVRYPHVHFDQSW-----G----DVS--- 299 (558)
Q Consensus 244 ~-~~~~~~l~iFPEGt~s~~~~ll~Fk~Gaf-----------~~~~pI~Pv~i~y~~~~~~~~w-----~----~~~--- 299 (558)
. .|. ++.+|||||||.++.+++||.|++ ..++|||||+|.|.+..-...+ | ..+
T Consensus 343 l~~G~--~v~iFpEGTRSrtGkLl~pK~Gll~~~~~a~~~~~~~~v~IVPV~I~Yd~v~E~~~y~~e~~G~~k~~esl~~ 420 (783)
T PRK03355 343 VEKRF--NLSWYIEGTRSRTGKLLPPKLGLLSYVADAYLDGRSDDVLLQPVSISFDQLHEIGEYAAEARGGEKTPEGLRW 420 (783)
T ss_pred HhCCC--eEEEEecCCCCCCCCCCcccccHHHHHHHHHHhcccCCCEEEEEEEEecccccchhHHHHhcCCCcccccHHH
Confidence 4 555 999999999999999999999953 3789999999999875432221 1 112
Q ss_pred HHHHHHHHhccccceEEEEEecccCCCcccc--------------cCHHHHHHHHHHHHHHhcCCcc
Q 008641 300 LGKLMFRMFTQFHNFMEVEYLPVVFPSDNQK--------------ENALRFAERTSHAMASALNAVQ 352 (558)
Q Consensus 300 ~~~~~~~~~~~~~~~~~v~~l~pi~~~~~~~--------------~~~~~~~~~v~~~i~~~l~~~~ 352 (558)
++..+..+....++.+.|+||+|++..+.-. ...+.++.+|...|.+...+.+
T Consensus 421 ~~~~~~~l~~~~~G~i~V~fGePisl~~~~~~~~~~~~~~~~~~~~~~~~la~~Vm~~In~~~~v~~ 487 (783)
T PRK03355 421 LYNYIKAQGERNYGKIYVRFGEPVSMRQYLGAPHGPLTQDPDAKRLALQKMAFEVAWRINQVTPVTA 487 (783)
T ss_pred HHHHHHHhccCCceeEEEEECCCCCHHHhhccccccccccchhhHHHHHHHHHHHHHHHHhcCCCCH
Confidence 2222222223336899999999999865311 1245577777777776654444
No 24
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.83 E-value=1.2e-19 Score=215.05 Aligned_cols=172 Identities=15% Similarity=0.181 Sum_probs=130.4
Q ss_pred EEEEccccCCCC--CCCEEEeCCCCchhHHHHhhhccc--ceeeccccCCCCHHHHHHHhcceEEEecCCccchHHHHHH
Q 008641 163 WIRRKGKPAPRQ--IAPIVVSNHISYIEPIFFFYELFP--TIVASESHDSIPFVGTIIRAMQVIYVDRFSQSSRKNAVSE 238 (558)
Q Consensus 163 ~~~~~g~~~~~~--~~~iivsNH~S~~D~~~l~~~~~p--~~v~k~~l~~~p~~g~~~~~~g~i~v~r~~~~~~~~~~~~ 238 (558)
+++++|.++.++ +++|+||||+|++|++++...+.+ +|++|+++.+.|++|++++.+|.++|||+++ +.+++
T Consensus 440 ~~~~~g~~~~~~~~~~~i~~~nH~s~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~----~~~~~ 515 (1140)
T PRK06814 440 RVEVKGLENLQKAGKKAVIAANHVSFLDGPLLAAYLPEEPTFAIDTDIAKAWWVKPFLKLAKALPVDPTNP----MATRT 515 (1140)
T ss_pred EEEEeCCccccccCCCEEEEECCcchHHHHHHHHhCCCCeEEEEeHHHhhhhHHHHHHHhcCeeecCCCCh----HHHHH
Confidence 478888888553 357999999999998888877653 7999999999999999999999999999864 34566
Q ss_pred HHHHHhcCCCCeEEEeeCceecCCCcccccccccc----cCCCceeEEEEEccCCCCCCCCCCccHHHHHHHHhccccce
Q 008641 239 IKRKASCDRFPRVLLFPEGTTTNGKFLISFQLGAF----IPAYPIQPVIVRYPHVHFDQSWGDVSLGKLMFRMFTQFHNF 314 (558)
Q Consensus 239 ~~~~l~~~~~~~l~iFPEGt~s~~~~ll~Fk~Gaf----~~~~pI~Pv~i~y~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 314 (558)
+.+.+++|+ +++|||||||+.++.+.+||+|++ +.++||+||+|.+.+...-..++. .. -...+.+
T Consensus 516 ~~~~l~~g~--~~~ifPeGtr~~~~~~~~f~~g~~~~a~~~~~~i~pv~i~g~~~~~~~~~~~-~~-------~~~~~~~ 585 (1140)
T PRK06814 516 LIKEVQKGE--KLVIFPEGRITVTGSLMKIYDGPGMIADKAGAMVVPVRIDGLQFTHFSRLKN-QV-------RRKWFPK 585 (1140)
T ss_pred HHHHHHCCC--EEEEeCCCCCCCCCCccccchHHHHHHHHCCCCEEEEEEcCcccccccccCC-Cc-------ccccCCc
Confidence 778888898 999999999999999999999965 599999999998875321111111 10 0112467
Q ss_pred EEEEEecccCCCccc----ccCHHHHHHHHHHHHHHhc
Q 008641 315 MEVEYLPVVFPSDNQ----KENALRFAERTSHAMASAL 348 (558)
Q Consensus 315 ~~v~~l~pi~~~~~~----~~~~~~~~~~v~~~i~~~l 348 (558)
++|++++|+++.+.. .+..+.+.+.+++.|.+.+
T Consensus 586 ~~~~~~~~i~~~~~~~l~~~e~r~~~~~~l~~~~~~~~ 623 (1140)
T PRK06814 586 VTVTILPPVKLAVDPELKGRERRSAAGAALYDIMSDMM 623 (1140)
T ss_pred eEEEecCCcccCCCccccchhhHHHHHHHHHHHHHHHH
Confidence 899999999875432 2334455555666665544
No 25
>PLN02380 1-acyl-sn-glycerol-3-phosphate acyltransferase
Probab=99.82 E-value=9e-19 Score=177.07 Aligned_cols=109 Identities=18% Similarity=0.162 Sum_probs=86.5
Q ss_pred HHHhhCeEEEEEccccCC----CCCCCEEEeCCCCchhHHHHhhhcc-------cceeeccccCCCCHHHHHHHhcceEE
Q 008641 155 ILFSFGYHWIRRKGKPAP----RQIAPIVVSNHISYIEPIFFFYELF-------PTIVASESHDSIPFVGTIIRAMQVIY 223 (558)
Q Consensus 155 ~~~~~g~~~~~~~g~~~~----~~~~~iivsNH~S~~D~~~l~~~~~-------p~~v~k~~l~~~p~~g~~~~~~g~i~ 223 (558)
+-++.|++ +++.|.+.. .++++|++|||+|++|+++++.... +++++|+++.++|++||.++.+|+|+
T Consensus 61 ~~~~~Gvk-v~V~gd~~~~~~~g~e~~lIisNHqS~~D~l~l~~l~~r~~~l~~~~~vlKkeL~~iPv~Gw~~~~~~~If 139 (376)
T PLN02380 61 VDWWAGVK-VQLYADEETFELMGKEHALVISNHRSDIDWLVGWILAQRSGCLGSALAVMKKSSKFLPVIGWSMWFSEYVF 139 (376)
T ss_pred HHHcCCeE-EEEEecchhhccCCCCcEEEEECCChhHHHHHHHHHhhhcccccceeEeeHHHhhhccHHHHHHHHcCCEE
Confidence 34667876 788876542 4567899999999999887765531 37899999999999999999999999
Q ss_pred EecCCccchHHHHHHHHHHHhcC-CCCeEEEeeCceecCCCcc
Q 008641 224 VDRFSQSSRKNAVSEIKRKASCD-RFPRVLLFPEGTTTNGKFL 265 (558)
Q Consensus 224 v~r~~~~~~~~~~~~~~~~l~~~-~~~~l~iFPEGt~s~~~~l 265 (558)
++|++..+ ++.+++..+.+++. .+.+++|||||||...+.+
T Consensus 140 IdR~~~~d-~~~l~~~~~~l~~~~~~~wllIFPEGTR~~~~k~ 181 (376)
T PLN02380 140 LERSWAKD-ENTLKSGFQRLKDFPRPFWLALFVEGTRFTQAKL 181 (376)
T ss_pred ecCCchhH-HHHHHHHHHHHhhCCCccEEEEecCcCCCCchhh
Confidence 99998766 56667777777762 2248999999999977754
No 26
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=99.82 E-value=4.9e-19 Score=150.76 Aligned_cols=147 Identities=21% Similarity=0.288 Sum_probs=134.8
Q ss_pred hccccccChHHHHHHHHHHHhhCCCCCCcccHHHHH---HHhccCCcH-HHHHHHhhhcCCCCCceeHHHHHHHHHhhcc
Q 008641 384 VGSIFHISSLEAVNFLEKFLSMNPDPSGCVKLLDFL---SVLRLKTCP-LSDEIFGFIDVDKNGSITFKQFLYASAHVMK 459 (558)
Q Consensus 384 ~~~~~~lt~~~~~~~~~~F~~~D~d~~G~Is~~ef~---~~l~~~~~~-~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~ 459 (558)
......++.++.+.++..|..||.+++|+|+.+||. +++|..+.. ++.++...+|+++.|.|+|++|...+.....
T Consensus 21 ~~~~~~l~~~q~q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~ 100 (172)
T KOG0028|consen 21 ASPKSELTEEQKQEIKEAFELFDPDMAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLG 100 (172)
T ss_pred CCCCccccHHHHhhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHh
Confidence 335667899999999999999999999999999994 445766554 8999999999999999999999999888887
Q ss_pred CcchhHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCcHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC
Q 008641 460 LPLFWQACELAFAECDPDGNGFISENQLEVTIRPAIPDLNKYEIDSLFRLFDSDGDGRVSRDDFICCLRKN 530 (558)
Q Consensus 460 ~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~~~ 530 (558)
..++.++++.+|+.+|.|++|.|+..+|+.+.+.+|++++++++.+++.++|.|+||.|+-+||..+|++.
T Consensus 101 e~dt~eEi~~afrl~D~D~~Gkis~~~lkrvakeLgenltD~El~eMIeEAd~d~dgevneeEF~~imk~t 171 (172)
T KOG0028|consen 101 ERDTKEEIKKAFRLFDDDKTGKISQRNLKRVAKELGENLTDEELMEMIEEADRDGDGEVNEEEFIRIMKKT 171 (172)
T ss_pred ccCcHHHHHHHHHcccccCCCCcCHHHHHHHHHHhCccccHHHHHHHHHHhcccccccccHHHHHHHHhcC
Confidence 77789999999999999999999999999999999999999999999999999999999999999998764
No 27
>cd07987 LPLAT_MGAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this suubgroup are such LPLATs as 2-acylglycerol O-acyltransferase (MGAT), and similar proteins.
Probab=99.81 E-value=5.8e-20 Score=175.06 Aligned_cols=172 Identities=17% Similarity=0.175 Sum_probs=123.2
Q ss_pred EEccccCCC-CCCCEEEeCCCCch-hHHHHhhh-c------ccceeeccccCCCCHHHHHHHhcceEEEecCCccchHHH
Q 008641 165 RRKGKPAPR-QIAPIVVSNHISYI-EPIFFFYE-L------FPTIVASESHDSIPFVGTIIRAMQVIYVDRFSQSSRKNA 235 (558)
Q Consensus 165 ~~~g~~~~~-~~~~iivsNH~S~~-D~~~l~~~-~------~p~~v~k~~l~~~p~~g~~~~~~g~i~v~r~~~~~~~~~ 235 (558)
.+.|.++.+ ++++|+|+||.|++ |++++... . ..+++++.+++..|+++++++.+|.++++|+
T Consensus 9 ~v~g~e~lp~~~~~i~v~NH~s~~~D~~~l~~~~~~~~~~~~~~~la~~~~~~~p~~~~~~~~~g~i~~~r~-------- 80 (212)
T cd07987 9 EVRGLENIPDEGPALLVHPHGGLPIDGALLAAAFLLLFPGRLPRALADHFLFPLPGLRDLLRRLGAVPGSRE-------- 80 (212)
T ss_pred EEeccccCCCCCcEEEEECCcchhHHHHHHHHHHHHhCCCCeeEEeecccceeCccHHHHHHHcCCcccCHH--------
Confidence 788877754 57889999999999 98888766 1 1257889999999999999999999998874
Q ss_pred HHHHHHHHhcCCCCeEEEeeCceecCC-------Cccccccccc----ccCCCceeEEEEEccCCCCCCCCC-CccHHHH
Q 008641 236 VSEIKRKASCDRFPRVLLFPEGTTTNG-------KFLISFQLGA----FIPAYPIQPVIVRYPHVHFDQSWG-DVSLGKL 303 (558)
Q Consensus 236 ~~~~~~~l~~~~~~~l~iFPEGt~s~~-------~~ll~Fk~Ga----f~~~~pI~Pv~i~y~~~~~~~~w~-~~~~~~~ 303 (558)
.+.+.+++|+ +|+||||||++.. ..+++||+|+ .+.++||+||++.+.+..+..... ....+..
T Consensus 81 --~~~~~L~~G~--~l~ifPeGtr~~~~~~~~~~~~~~~~~~G~~~lA~~~~~pIvPv~~~G~~~~~~~~~~~~~~~~~~ 156 (212)
T cd07987 81 --NCVRLLREGE--LVLIFPGGAREALKSKREEYYLLWKKRKGFARLALRAGAPIVPVFTFGEEELFRVLGDPDGPVGKR 156 (212)
T ss_pred --HHHHHhcCCC--EEEEEcCCHHHHhccCCCeEEEEECCCcCHHHHHHHcCCCeEeEEEeCcHHHHhhhccCCCCceee
Confidence 3566777888 9999999999742 2378999995 459999999999987643221000 0001111
Q ss_pred HHHHhc-cccceEEEEEecccCCCc-----ccccCHHHHHHHHHHHHHHhc
Q 008641 304 MFRMFT-QFHNFMEVEYLPVVFPSD-----NQKENALRFAERTSHAMASAL 348 (558)
Q Consensus 304 ~~~~~~-~~~~~~~v~~l~pi~~~~-----~~~~~~~~~~~~v~~~i~~~l 348 (558)
..+.+. ..+..++|.+|+||.... .+.++.+++.+++.++|++.+
T Consensus 157 ~~~~l~~p~~~~i~v~~G~Pi~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 207 (212)
T cd07987 157 LFRLLPLPRRLPLYPVFGEPIVVPRPPIPDPPDEDVEELHQKYIAALRELI 207 (212)
T ss_pred hhceeccCCCCcceEEeCCCccCCCCCCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 112222 224589999999999754 234456677777777776664
No 28
>PTZ00183 centrin; Provisional
Probab=99.81 E-value=1.1e-18 Score=158.20 Aligned_cols=146 Identities=21% Similarity=0.267 Sum_probs=130.7
Q ss_pred ccccChHHHHHHHHHHHhhCCCCCCcccHHHHHHHhc---cCCc-HHHHHHHhhhcCCCCCceeHHHHHHHHHhhccCcc
Q 008641 387 IFHISSLEAVNFLEKFLSMNPDPSGCVKLLDFLSVLR---LKTC-PLSDEIFGFIDVDKNGSITFKQFLYASAHVMKLPL 462 (558)
Q Consensus 387 ~~~lt~~~~~~~~~~F~~~D~d~~G~Is~~ef~~~l~---~~~~-~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~ 462 (558)
..+++++++++++.+|..+|.+++|.|+.+||..++. .... ..+..+|+.+|.+++|.|+++||..++........
T Consensus 8 ~~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~ 87 (158)
T PTZ00183 8 RPGLTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERD 87 (158)
T ss_pred cCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCC
Confidence 3458899999999999999999999999999977764 4333 47999999999999999999999998876544445
Q ss_pred hhHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCcHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCcc
Q 008641 463 FWQACELAFAECDPDGNGFISENQLEVTIRPAIPDLNKYEIDSLFRLFDSDGDGRVSRDDFICCLRKNPL 532 (558)
Q Consensus 463 ~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~~~~~ 532 (558)
.++.++.+|+.+|.+++|.|+.+||..++...+..+++++++.+|..+|.|++|.|+++||..++...|.
T Consensus 88 ~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~l~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~ 157 (158)
T PTZ00183 88 PREEILKAFRLFDDDKTGKISLKNLKRVAKELGETITDEELQEMIDEADRNGDGEISEEEFYRIMKKTNL 157 (158)
T ss_pred cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhcccC
Confidence 5778999999999999999999999999999999999999999999999999999999999999998775
No 29
>TIGR00530 AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltransferases. 1-acyl-sn-glycerol-3-phosphate acyltransferase is also called 1-AGP acyltransferase, lysophosphatidic acid acyltransferase, and LPA acyltransferase.
Probab=99.79 E-value=4.6e-19 Score=155.26 Aligned_cols=119 Identities=26% Similarity=0.442 Sum_probs=104.8
Q ss_pred EEEccccCCC-CCCCEEEeCCCCchhHHHHhhhcc--cceeeccccCCCCHHHHHHHhcceEEEecCCccchHHHHHHHH
Q 008641 164 IRRKGKPAPR-QIAPIVVSNHISYIEPIFFFYELF--PTIVASESHDSIPFVGTIIRAMQVIYVDRFSQSSRKNAVSEIK 240 (558)
Q Consensus 164 ~~~~g~~~~~-~~~~iivsNH~S~~D~~~l~~~~~--p~~v~k~~l~~~p~~g~~~~~~g~i~v~r~~~~~~~~~~~~~~ 240 (558)
+++.|.++.+ ++++|+++||.|++|++++...+. .+++++.++.+.|+++++++.+|.++|+|++..+....++++.
T Consensus 4 ~~v~g~~~lp~~~~~i~v~nH~s~~D~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~i~r~~~~~~~~~~~~~~ 83 (130)
T TIGR00530 4 VEVVGPENLPAKSPVLVVANHQSNLDPLTLSAAFPPPIVFIAKKELKWIPFFGIMLWLTGAIFIDRENIRAIATALKAAI 83 (130)
T ss_pred EEEECcccCCCCCCEEEEECCCchhHHHHHHHHcCCCcEEEEhHHhhhCCHHHHHHHHcCCEEecCCChHHHHHHHHHHH
Confidence 6788887755 688999999999999888777765 2578999999999999999999999999988666777889999
Q ss_pred HHHhcCCCCeEEEeeCceecCCCcccccccccc----cCCCceeEEEE
Q 008641 241 RKASCDRFPRVLLFPEGTTTNGKFLISFQLGAF----IPAYPIQPVIV 284 (558)
Q Consensus 241 ~~l~~~~~~~l~iFPEGt~s~~~~ll~Fk~Gaf----~~~~pI~Pv~i 284 (558)
+.+++|. +++|||||++++++.+.+|++|++ +.++||+||.+
T Consensus 84 ~~l~~g~--~v~ifPeG~~~~~~~~~~f~~g~~~la~~~~~pvvpv~~ 129 (130)
T TIGR00530 84 EVLKQGR--SIGVFPEGTRSRGRDILPFKKGAFHIAIKAGVPILPVVL 129 (130)
T ss_pred HHHhCCC--EEEEeCCCCCCCCCCCCCcchhHHHHHHHcCCCEEeEEe
Confidence 9999998 999999999999999999999954 48999999987
No 30
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=99.79 E-value=3.8e-18 Score=155.22 Aligned_cols=149 Identities=28% Similarity=0.464 Sum_probs=134.1
Q ss_pred cChHHHHHHHHHHHhhCCC-CCCcccHHHHHHHhccCCcHHHHHHHhhhcCCCCCc-eeHHHHHHHHHhhccCcchhHHH
Q 008641 390 ISSLEAVNFLEKFLSMNPD-PSGCVKLLDFLSVLRLKTCPLSDEIFGFIDVDKNGS-ITFKQFLYASAHVMKLPLFWQAC 467 (558)
Q Consensus 390 lt~~~~~~~~~~F~~~D~d-~~G~Is~~ef~~~l~~~~~~~~~~lf~~~D~d~~g~-Is~~Ef~~~~~~~~~~~~~~~~~ 467 (558)
++..++..+...|.++|.+ ++|.++.+||..+..+..+....++++.+|.+++|. |+|++|+..+.........++++
T Consensus 27 fs~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~~~~~Np~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl 106 (187)
T KOG0034|consen 27 FSANEIERLYERFKKLDRNNGDGYLTKEEFLSIPELALNPLADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKASKREKL 106 (187)
T ss_pred cCHHHHHHHHHHHHHhccccccCccCHHHHHHHHHHhcCcHHHHHHHHHhccCCCCccCHHHHHHHHhhhcCCccHHHHH
Confidence 8899999999999999999 999999999999998777888999999999999888 99999999998887777767799
Q ss_pred HHHhhhhCCCCCCcccHHHHHHHHHHhCC-CCc--HH----HHHHHHHHhCCCCCCceeHHHHHHHHHhCcchHHHHh
Q 008641 468 ELAFAECDPDGNGFISENQLEVTIRPAIP-DLN--KY----EIDSLFRLFDSDGDGRVSRDDFICCLRKNPLLIAIFS 538 (558)
Q Consensus 468 ~~~F~~~D~d~~G~Is~~E~~~~l~~~~~-~~~--~~----~i~~lf~~~D~d~dG~Is~~eF~~~l~~~~~~~~~~~ 538 (558)
+.+|+.||.+++|+|+.+|+..++..+.. ..+ ++ .++.+|.++|.|+||+|+++||.+++.+.|.+.+.+.
T Consensus 107 ~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~~~P~~~~~m~ 184 (187)
T KOG0034|consen 107 RFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVEKQPDLLEKMT 184 (187)
T ss_pred HHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHcCccHHHHcC
Confidence 99999999999999999999999998743 333 33 3677899999999999999999999999999887654
No 31
>PTZ00184 calmodulin; Provisional
Probab=99.78 E-value=8.5e-18 Score=150.72 Aligned_cols=141 Identities=27% Similarity=0.410 Sum_probs=126.2
Q ss_pred ccChHHHHHHHHHHHhhCCCCCCcccHHHHHHHh---ccCCc-HHHHHHHhhhcCCCCCceeHHHHHHHHHhhccCcchh
Q 008641 389 HISSLEAVNFLEKFLSMNPDPSGCVKLLDFLSVL---RLKTC-PLSDEIFGFIDVDKNGSITFKQFLYASAHVMKLPLFW 464 (558)
Q Consensus 389 ~lt~~~~~~~~~~F~~~D~d~~G~Is~~ef~~~l---~~~~~-~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~~~ 464 (558)
.++.++.+.+++.|..+|.+++|.|+.+||..++ +.... +.+..+++.+|.+++|.|+++||+.++..........
T Consensus 4 ~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~~~ 83 (149)
T PTZ00184 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDTDSE 83 (149)
T ss_pred ccCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCcHH
Confidence 4788899999999999999999999999998765 44444 4789999999999999999999999987665444456
Q ss_pred HHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCcHHHHHHHHHHhCCCCCCceeHHHHHHHHHh
Q 008641 465 QACELAFAECDPDGNGFISENQLEVTIRPAIPDLNKYEIDSLFRLFDSDGDGRVSRDDFICCLRK 529 (558)
Q Consensus 465 ~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~~ 529 (558)
+.+..+|+.+|.+++|.|+.+||..++...+..+++++++.+|+.+|.+++|.|+|+||+.++..
T Consensus 84 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 148 (149)
T PTZ00184 84 EEIKEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMS 148 (149)
T ss_pred HHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCCCCCHHHHHHHHHhcCCCCCCcCcHHHHHHHHhc
Confidence 78999999999999999999999999999998899999999999999999999999999988764
No 32
>PF01553 Acyltransferase: Acyltransferase; InterPro: IPR002123 This family contains acyltransferases involved in phospholipid biosynthesis and other proteins of unknown function []. This domain is found in tafazzins, defects in which are the cause of Barth syndrome; a severe inherited disorder which is often fatal in childhood and is characterised by cardiac and skeletal abnormalities. Phospholipid/glycerol acyltransferase is not found in the viruses or the archaea and is under represented in the bacteria. Bacterial glycerol-phosphate acyltransferases are involved in membrane biogenesis since they use fatty acid chains to form the first membrane phospholipids [].; GO: 0016746 transferase activity, transferring acyl groups, 0008152 metabolic process; PDB: 1IUQ_A 1K30_A.
Probab=99.77 E-value=1.8e-20 Score=164.65 Aligned_cols=120 Identities=30% Similarity=0.481 Sum_probs=72.9
Q ss_pred EEEccccCCC-CCCCEEEeCCCCchhHHHHhhhcc------cceeeccccCCCCHHHHHHHhcceEEEecCCccchHHHH
Q 008641 164 IRRKGKPAPR-QIAPIVVSNHISYIEPIFFFYELF------PTIVASESHDSIPFVGTIIRAMQVIYVDRFSQSSRKNAV 236 (558)
Q Consensus 164 ~~~~g~~~~~-~~~~iivsNH~S~~D~~~l~~~~~------p~~v~k~~l~~~p~~g~~~~~~g~i~v~r~~~~~~~~~~ 236 (558)
+++.|.++.+ ++++|++|||+|++|++++...+. ..+++++++.+.|+++++++.+|.++++|....+....+
T Consensus 2 v~v~g~e~l~~~~~~i~v~NH~s~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~i~r~~~~~~~~~~ 81 (132)
T PF01553_consen 2 VEVEGLENLPKGGGVIFVSNHQSWLDGFALMALLQRSGPRRPRFVAKDELFKIPFLGWFLRRLGFIPIDRSNRKKNRKAL 81 (132)
T ss_dssp ----HHHHHHTT-EEEEEE----TTHHHHHHHHHTTT-HHH-EEEEECHHHH-TTTHHHHHEEEEE--CCHHHHHHHHHH
T ss_pred CccCccccCCCCCCEEEEecCCCCCcchheeehhhhhccccceeEeeeccccchhhhhhhhhccceeeeeecccccchhH
Confidence 5677877644 688999999999999999988872 367999999989999999999999999997777788899
Q ss_pred HHHHHHHhcCCCCeEEEeeCceecCCCccccccccccc----CCCceeEEEEE
Q 008641 237 SEIKRKASCDRFPRVLLFPEGTTTNGKFLISFQLGAFI----PAYPIQPVIVR 285 (558)
Q Consensus 237 ~~~~~~l~~~~~~~l~iFPEGt~s~~~~ll~Fk~Gaf~----~~~pI~Pv~i~ 285 (558)
+.+.+.+++++ +++||||||+++...+++|++|++. .+++|+||+|+
T Consensus 82 ~~~~~~l~~~~--~i~ifPEG~~~~~~~~~~~~~G~~~~a~~~~~~ivPv~i~ 132 (132)
T PF01553_consen 82 KDIKEILRKGG--SIVIFPEGTRSRSGELLPFKKGAFHIALKAKVPIVPVAIS 132 (132)
T ss_dssp HHHHHHHHC-----EEE-TT-S---B--B----HHHHHHHHHH----------
T ss_pred HHHHHHhhhcc--eeeecCCccCcCCCccCCccHHHHHHHHHcCCccccccCC
Confidence 99999999998 7999999999999889999999654 69999999984
No 33
>TIGR03703 plsB glycerol-3-phosphate O-acyltransferase. Members of this protein family are PlsB, glycerol-3-phosphate O-acyltransferase, present in E. coli and numerous related species. In many bacteria, PlsB is not found, and appears to be replaced by a two enzyme system for 1-acyl-glycerol-3-phosphate biosynthesis, the PlsX/Y system.
Probab=99.76 E-value=1.4e-17 Score=182.76 Aligned_cols=161 Identities=20% Similarity=0.231 Sum_probs=114.6
Q ss_pred EEEccccCCC----CC-CCEEEeCCCCchhHHHHhhhcc------cceeeccccCCCCHHHHHHHhcceEEEecCCccch
Q 008641 164 IRRKGKPAPR----QI-APIVVSNHISYIEPIFFFYELF------PTIVASESHDSIPFVGTIIRAMQVIYVDRFSQSSR 232 (558)
Q Consensus 164 ~~~~g~~~~~----~~-~~iivsNH~S~~D~~~l~~~~~------p~~v~k~~l~~~p~~g~~~~~~g~i~v~r~~~~~~ 232 (558)
+.+.|.++.+ ++ ++|+|+||+|++|++++.+.+. |.++++..+ +.|++|++++.+|+++|+|+...+.
T Consensus 276 v~V~g~E~l~~~~~~~~pvI~vpNHrS~lD~llL~~~l~~~~l~~p~iaag~nL-~~p~~g~llr~~GaffIrR~~~~~~ 354 (799)
T TIGR03703 276 INVNNADRVRKLAQKGHEIIYVPCHRSHMDYLLLSYVLYHEGLVPPHIAAGINL-NFWPAGPIFRRGGAFFIRRSFKGNK 354 (799)
T ss_pred eEEechhhcccccCCCCcEEEEECCCCchHHHHHHHHHhhcCCCCceEEechhh-ccHHHHHHHHHCCceEeecCCCcch
Confidence 5666766532 34 8899999999999888876643 234455554 7999999999999999999865432
Q ss_pred --HHHHHH-HHHHHhcCCCCeEEEeeCceecCCCccccccccccc-----------CCCceeEEEEEccCCCCCCCC---
Q 008641 233 --KNAVSE-IKRKASCDRFPRVLLFPEGTTTNGKFLISFQLGAFI-----------PAYPIQPVIVRYPHVHFDQSW--- 295 (558)
Q Consensus 233 --~~~~~~-~~~~l~~~~~~~l~iFPEGt~s~~~~ll~Fk~Gaf~-----------~~~pI~Pv~i~y~~~~~~~~w--- 295 (558)
...+++ +...+++|. ++.+|||||||.++.+++||.|++. .+++||||+|.|.+..-...+
T Consensus 355 ly~~vl~eyi~~ll~~G~--~v~iFpEGtRSrtGkll~pK~G~l~~a~~a~~~~~~~~v~IVPVsI~Yekv~E~~~y~~E 432 (799)
T TIGR03703 355 LYSAVFREYLHELFAKGY--SVEYFVEGGRSRTGRLLPPKTGMLAMTLQAMLRGIRRPITLVPVYIGYEHVMEVATYLKE 432 (799)
T ss_pred hHHHHHHHHHHHHHhCCC--EEEEEcCCCcCCCCCccchHHHHHHHHHHHhhccCCCCcEEEEEEEecccccchhHHHHH
Confidence 334444 445667777 9999999999999999999999543 379999999999753221111
Q ss_pred --C----CccHHHHHH--HHhccccceEEEEEecccCCCcc
Q 008641 296 --G----DVSLGKLMF--RMFTQFHNFMEVEYLPVVFPSDN 328 (558)
Q Consensus 296 --~----~~~~~~~~~--~~~~~~~~~~~v~~l~pi~~~~~ 328 (558)
| ..++...+. +.+.+ .+.+.|+||+|++..+.
T Consensus 433 l~G~~K~kEsl~~~l~~~~~l~~-~G~i~V~FGePIsl~~~ 472 (799)
T TIGR03703 433 LRGKRKEKESVFGVLKTLRKLRN-FGQGYVNFGEPINLNDY 472 (799)
T ss_pred hcCCCccccCHHHHHHHHhccCC-CceEEEEeCCCccHHHH
Confidence 1 112222221 33344 79999999999986543
No 34
>cd07985 LPLAT_GPAT Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT. Lysophospholipid acyltransferase (LPLAT) superfamily member: glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB). LPLATs are acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. This subgroup includes glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB).
Probab=99.76 E-value=5.5e-18 Score=158.07 Aligned_cols=172 Identities=12% Similarity=0.089 Sum_probs=125.0
Q ss_pred CCCCCCEEEeCCCCchhHHHHhhhccc--ceeeccccC-------CCCHHHHHHHhcceEEEecCCc------------c
Q 008641 172 PRQIAPIVVSNHISYIEPIFFFYELFP--TIVASESHD-------SIPFVGTIIRAMQVIYVDRFSQ------------S 230 (558)
Q Consensus 172 ~~~~~~iivsNH~S~~D~~~l~~~~~p--~~v~k~~l~-------~~p~~g~~~~~~g~i~v~r~~~------------~ 230 (558)
+..+++|++|||+|++|+.++..++.. .++++++++ ..|++++++...|.++|+|+.. +
T Consensus 19 p~~~~vIl~sNH~S~~Dp~ii~~~~~r~~~~lAk~~lf~ag~~~~~~pl~~~f~~~~~~~pV~r~k~~~~~P~~~~~k~~ 98 (235)
T cd07985 19 AQGHNVVLLANHQTEADPAVISLLLEKTHPYLAENMIYVAGDRVVSDPLCKPFSMGRNLLCVHSKKHIDDPPELKEEKMK 98 (235)
T ss_pred cCCCCEEEEECCcccccHHHHHHHhccccHHHhhhhheeccccccccHhHHHHHhhCCceeeecCcccccchhhhhhhhh
Confidence 446788999999999998888777642 345555555 8999999999999999999862 2
Q ss_pred chHHHHHHHHHHHhcCCCCeEEEeeCceecCCCcccccccccc-------------cCCCc--eeEEEEEccCCCCCC--
Q 008641 231 SRKNAVSEIKRKASCDRFPRVLLFPEGTTTNGKFLISFQLGAF-------------IPAYP--IQPVIVRYPHVHFDQ-- 293 (558)
Q Consensus 231 ~~~~~~~~~~~~l~~~~~~~l~iFPEGt~s~~~~ll~Fk~Gaf-------------~~~~p--I~Pv~i~y~~~~~~~-- 293 (558)
...++++.+.+.|++|+ ..++|||||||+......++++|.| .+++| |+|++|. .+....+
T Consensus 99 ~~~~alk~~~~lLk~G~-~~i~IfPEGtR~r~~~~g~~~p~~Fd~~~~~~~~~La~~s~~p~hi~Plai~-~ydi~Ppp~ 176 (235)
T cd07985 99 ANLATLKEMQQLLNEGG-QLIWVAPSGGRDRPDANGEWYPDPFDPSAVEMMRLLAQKSRVPTHLYPMALL-TYDIMPPPK 176 (235)
T ss_pred ccHHHHHHHHHHHHcCC-eEEEEcCCCCCCCCCCCCCccCCccchHHHHHHHHHHHhcCCCceEEeeEEE-eecccCCCc
Confidence 44678899999999987 2488999999997655566666644 38999 9999999 4444433
Q ss_pred CCCCccHHHHHHHHhccccceEEEEEecccCCCcc------cccCHHHHHHHHHHHHHHhcCC
Q 008641 294 SWGDVSLGKLMFRMFTQFHNFMEVEYLPVVFPSDN------QKENALRFAERTSHAMASALNA 350 (558)
Q Consensus 294 ~w~~~~~~~~~~~~~~~~~~~~~v~~l~pi~~~~~------~~~~~~~~~~~v~~~i~~~l~~ 350 (558)
.|.. ..... |.+ .+..+.|.+++|+...+. ..+..+++++.+.+.+.+.+++
T Consensus 177 ~v~~-~ige~--r~~--~f~~v~i~vg~~i~~~~~~~~~~d~~e~~~~~~~~i~~~v~~~y~~ 234 (235)
T cd07985 177 QVEK-EIGEK--RAV--AFTGVGLAVGEEIDFSAIAATHKDPEEVREAFSKAAFDSVKRLYNV 234 (235)
T ss_pred cccc-ccccc--ccc--cccceEEEecCCccchhhhcccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 2211 00000 011 255789999999998643 2356678999999999888754
No 35
>cd06551 LPLAT Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis. Lysophospholipid acyltransferase (LPLAT) superfamily members are acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis. These proteins catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this superfamily are LPLATs such as glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB), 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), lysophosphatidylcholine acyltransferase 1 (LPCAT-1), lysophosphatidylethanolamine acyltransferase (LPEAT, also known as, MBOAT2, membrane-bound O-acyltransferase domain-containing protein 2), lipid A biosynthesis lauroyl/myristoyl acyltransferase, 2-acylglycerol O-acyltransferase (MGAT), dihydroxyacetone phosphate acyltransferase (DHAPAT, also known as 1 glycerol-3-p
Probab=99.76 E-value=1.8e-17 Score=154.84 Aligned_cols=163 Identities=26% Similarity=0.329 Sum_probs=126.9
Q ss_pred CeEEEEEccccCC-CCCCCEEEeCCCCchhHHHHhhhc-----cc-ceeeccccC-CCCHHHHHHHhcceEEEecCCccc
Q 008641 160 GYHWIRRKGKPAP-RQIAPIVVSNHISYIEPIFFFYEL-----FP-TIVASESHD-SIPFVGTIIRAMQVIYVDRFSQSS 231 (558)
Q Consensus 160 g~~~~~~~g~~~~-~~~~~iivsNH~S~~D~~~l~~~~-----~p-~~v~k~~l~-~~p~~g~~~~~~g~i~v~r~~~~~ 231 (558)
+..++.+.|.++. .++++|++|||.|++|++++...+ .+ .++++.... ..|+++ .+|.++++|.+..+
T Consensus 10 ~~~~~~~~g~~~~p~~~~~i~v~nH~s~~D~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~----~~g~~~i~r~~~~~ 85 (187)
T cd06551 10 GFVRLEVKGPPPPPGGGPVLFVSNHSSWWDGLILFLLLERGLRRDVYGLMDEELLERYPFFT----RLGAFSVDRDSPRS 85 (187)
T ss_pred ceEEEEEeccccCCCCCCEEEEEcchhhHHHHHHHHHHHhccCCCeEEEEcHhhhhhChHHh----hcCeEEecCCChhh
Confidence 4455899998874 557889999999999988887765 22 567776655 345444 44999999987666
Q ss_pred hHHHHHHHHHHHhc-CCCCeEEEeeCceecCCC-cccccccccc----cCCCceeEEEEEccCCCCCCCCCCccHHHHHH
Q 008641 232 RKNAVSEIKRKASC-DRFPRVLLFPEGTTTNGK-FLISFQLGAF----IPAYPIQPVIVRYPHVHFDQSWGDVSLGKLMF 305 (558)
Q Consensus 232 ~~~~~~~~~~~l~~-~~~~~l~iFPEGt~s~~~-~ll~Fk~Gaf----~~~~pI~Pv~i~y~~~~~~~~w~~~~~~~~~~ 305 (558)
..+.++.+.+.+++ |. +++|||||+++++. .+.+|++|++ ..++||+||++.|.....
T Consensus 86 ~~~~~~~~~~~l~~~g~--~v~ifPeG~~~~~~~~~~~~~~g~~~la~~~~~~IvPv~i~~~~~~~-------------- 149 (187)
T cd06551 86 AAKSLKYVARLLSKPGS--VVWIFPEGTRTRRDKRPLQFKPGVAHLAEKAGVPIVPVALRYTFELF-------------- 149 (187)
T ss_pred HHHHHHHHHHHHhcCCc--EEEEeCCcccCCCCCCcccccchHHHHHHHcCCcEEEEEEecccccc--------------
Confidence 67889999999998 76 99999999999887 8889999954 479999999999875421
Q ss_pred HHhccccceEEEEEecccCCCcccccCHHHHHHHHHHHHHHhc
Q 008641 306 RMFTQFHNFMEVEYLPVVFPSDNQKENALRFAERTSHAMASAL 348 (558)
Q Consensus 306 ~~~~~~~~~~~v~~l~pi~~~~~~~~~~~~~~~~v~~~i~~~l 348 (558)
.....++|++++|+..++ ..+.+++++++.+.|.+.+
T Consensus 150 ----~~~~~~~i~~~~pi~~~~--~~~~~~~~~~~~~~~~~~~ 186 (187)
T cd06551 150 ----EQFPEIFVRIGPPIPYAE--TALGEELAAELANRLTRLL 186 (187)
T ss_pred ----CCCCcEEEEECCCccccc--cccHHHHHHHHHHHHHHhc
Confidence 124578999999999854 3457888888888887764
No 36
>PRK04974 glycerol-3-phosphate acyltransferase; Validated
Probab=99.76 E-value=5.4e-18 Score=186.02 Aligned_cols=187 Identities=18% Similarity=0.179 Sum_probs=127.9
Q ss_pred EEEccccCCC----C-CCCEEEeCCCCchhHHHHhhhcc-----cceeeccccCCCCHHHHHHHhcceEEEecCCccch-
Q 008641 164 IRRKGKPAPR----Q-IAPIVVSNHISYIEPIFFFYELF-----PTIVASESHDSIPFVGTIIRAMQVIYVDRFSQSSR- 232 (558)
Q Consensus 164 ~~~~g~~~~~----~-~~~iivsNH~S~~D~~~l~~~~~-----p~~v~k~~l~~~p~~g~~~~~~g~i~v~r~~~~~~- 232 (558)
+.+.|.++.+ + .++|+|+||+|++|++++.+.+. +.++++.+..+.|++|++++.+|+++|+|+.+.+.
T Consensus 286 i~V~g~e~L~~~~~~~~~vI~v~NHrS~lD~llL~~~l~~~gl~~p~iAagenl~~p~lg~llr~~GaffIrR~~~~~~l 365 (818)
T PRK04974 286 INVHNAERVRQLAQDGHEIVYVPCHRSHMDYLLLSYVLYHQGLVPPHIAAGINLNFWPAGPIFRRGGAFFIRRSFKGNKL 365 (818)
T ss_pred eEEcchhhhhhcccCCCCEEEEeCCCCchHHHHHHHHHhhcCCCCceEEehHHhcchHHHHHHHHCCceEeeCCCCchHH
Confidence 5677766543 3 47899999999999888876543 34667677779999999999999999999865433
Q ss_pred -HHHHHHH-HHHHhcCCCCeEEEeeCceecCCCccccccccccc-----------CCCceeEEEEEccCCCCCCCC----
Q 008641 233 -KNAVSEI-KRKASCDRFPRVLLFPEGTTTNGKFLISFQLGAFI-----------PAYPIQPVIVRYPHVHFDQSW---- 295 (558)
Q Consensus 233 -~~~~~~~-~~~l~~~~~~~l~iFPEGt~s~~~~ll~Fk~Gaf~-----------~~~pI~Pv~i~y~~~~~~~~w---- 295 (558)
...+++. .+.+++|. ++.+|||||||.++.+++||.|++. .+++||||+|.|.+-.-...+
T Consensus 366 y~~vl~~yi~~ll~~G~--~v~iFpEGtRSRtGkllppK~G~l~~a~~a~~~~~~~dv~IVPVsIsYekv~E~~~y~~el 443 (818)
T PRK04974 366 YSTVFREYLGELFARGY--SVEYFVEGGRSRTGRLLQPKTGMLAMTLQAMLRGSRRPITLVPVYIGYEHVMEVGTYAKEL 443 (818)
T ss_pred HHHHHHHHHHHHHhCCC--EEEEEcCCCcCCCCCCcchhhhHHHHHHHHhhcccCCCcEEEEEEEeccchhhhHHHHHHh
Confidence 2344443 45667777 9999999999999999999999553 357999999999752111111
Q ss_pred -C----CccHHHHHHHHh-ccccceEEEEEecccCCCcccc----------------------cCHHHHHHHHHHHHHHh
Q 008641 296 -G----DVSLGKLMFRMF-TQFHNFMEVEYLPVVFPSDNQK----------------------ENALRFAERTSHAMASA 347 (558)
Q Consensus 296 -~----~~~~~~~~~~~~-~~~~~~~~v~~l~pi~~~~~~~----------------------~~~~~~~~~v~~~i~~~ 347 (558)
| ..+.+..+.... ....+.+.|+||+|++..+.-. ...+.++.+|...|.+.
T Consensus 444 ~G~~K~kEsl~~il~~i~~~~~~G~v~V~FGePisl~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~La~~V~~~In~~ 523 (818)
T PRK04974 444 RGAPKEKESLFQVLRGIRKLRNFGQGYVNFGEPIPLNDYLNQHVPEWRESIDPIEEQRPAWLTPAVNNLANQVMVRINNA 523 (818)
T ss_pred cCCCCcCcCHHHHHHHHhhcCCCceEEEEeCCCccHHHHhhhhchhhhhhcccccccCcHhHHHHHHHHHHHHHHHHHhc
Confidence 1 112222111111 2237899999999997543100 11245777777777776
Q ss_pred cCCcc
Q 008641 348 LNAVQ 352 (558)
Q Consensus 348 l~~~~ 352 (558)
..+.+
T Consensus 524 ~~v~p 528 (818)
T PRK04974 524 AAANP 528 (818)
T ss_pred eecCH
Confidence 65544
No 37
>cd07983 LPLAT_DUF374-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: DUF374. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are the uncharacterized DUF374 phospholipid/glycerol acyltransferases and similar proteins.
Probab=99.73 E-value=2.6e-17 Score=153.94 Aligned_cols=170 Identities=14% Similarity=0.146 Sum_probs=121.4
Q ss_pred EEEEEccccCC-----CCCCCEEEeCCCCchhHHHHhhhccc-ceeeccccCCCCHHHHHHHhcceEEEecCCccchHHH
Q 008641 162 HWIRRKGKPAP-----RQIAPIVVSNHISYIEPIFFFYELFP-TIVASESHDSIPFVGTIIRAMQVIYVDRFSQSSRKNA 235 (558)
Q Consensus 162 ~~~~~~g~~~~-----~~~~~iivsNH~S~~D~~~l~~~~~p-~~v~k~~l~~~p~~g~~~~~~g~i~v~r~~~~~~~~~ 235 (558)
.++++.|.++. ..+|+|+++||+|.+|+.++.....+ .+++++. ...|+++++++..|.++|+|++..+..++
T Consensus 8 ~~~~v~g~e~l~~~~~~~~~~I~~~~H~s~l~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~g~~~i~r~~~~~~~~~ 86 (189)
T cd07983 8 LRWRVIGDESADALIAQGEPVILAFWHGRLLLMPYLFRRRKRIAALISRS-KDGEIIARVLERLGIRVVRGSSSRGGAAA 86 (189)
T ss_pred EeEEEeCchhhhhhccCCCCEEEEEeCchHHHhHHHhccCCCeEEEEecC-cCHHHHHHHHHHhCCCEEEcCCCCcHHHH
Confidence 34788887764 36789999999999997776544234 4466654 46789999999999999999887777889
Q ss_pred HHHHHHHHhcCCCCeEEEeeCceecCCCcccccccccc----cCCCceeEEEEEccCCCCCCCCCCccHHHHHHHHhccc
Q 008641 236 VSEIKRKASCDRFPRVLLFPEGTTTNGKFLISFQLGAF----IPAYPIQPVIVRYPHVHFDQSWGDVSLGKLMFRMFTQF 311 (558)
Q Consensus 236 ~~~~~~~l~~~~~~~l~iFPEGt~s~~~~ll~Fk~Gaf----~~~~pI~Pv~i~y~~~~~~~~w~~~~~~~~~~~~~~~~ 311 (558)
++++.+.+++|. .|+||||||++. ..+|++|++ ..++||+||++.+........|.... +...
T Consensus 87 ~~~~~~~lk~g~--~v~ifpeG~r~~---~~~~~~G~~~lA~~~~~pIvPv~i~~~~~~~~~~~~~~~--------~p~~ 153 (189)
T cd07983 87 LREMLRALKDGY--NIAITPDGPRGP---RYKVKPGVILLARKSGAPIVPVAIAASRAWRLKSWDRFI--------IPKP 153 (189)
T ss_pred HHHHHHHHhCCC--EEEEcCCCCCCc---ceecchHHHHHHHHhCCCEEEEEEEEEccEeccCccccc--------cCCC
Confidence 999999999998 999999999754 457999954 49999999999876532212221100 1112
Q ss_pred cceEEEEEecccCCCcccccCHHHHHHHHHHHHHHhc
Q 008641 312 HNFMEVEYLPVVFPSDNQKENALRFAERTSHAMASAL 348 (558)
Q Consensus 312 ~~~~~v~~l~pi~~~~~~~~~~~~~~~~v~~~i~~~l 348 (558)
.+.++|.+++|+++.+. .+ ++..+++.+.+.+.+
T Consensus 154 ~~~~~v~~~~pi~~~~~--~~-~~~~~~~~~~~~~~~ 187 (189)
T cd07983 154 FSRVVIVFGEPIHVPPD--AD-EEELEEYRLELEAAL 187 (189)
T ss_pred CcceEEEEeCCEeeCCC--CC-HHHHHHHHHHHHHHh
Confidence 35689999999987532 22 334444445544443
No 38
>PTZ00374 dihydroxyacetone phosphate acyltransferase; Provisional
Probab=99.72 E-value=3.6e-17 Score=176.83 Aligned_cols=154 Identities=19% Similarity=0.239 Sum_probs=115.8
Q ss_pred CCCCCCEEEeCCCCchhHHHHhhhcc------cceeeccccCCCCHHHHHHHhcceEEEecCCccc--hHHHHHHH-HHH
Q 008641 172 PRQIAPIVVSNHISYIEPIFFFYELF------PTIVASESHDSIPFVGTIIRAMQVIYVDRFSQSS--RKNAVSEI-KRK 242 (558)
Q Consensus 172 ~~~~~~iivsNH~S~~D~~~l~~~~~------p~~v~k~~l~~~p~~g~~~~~~g~i~v~r~~~~~--~~~~~~~~-~~~ 242 (558)
.++.++|+++||.|++|++++.+.+. |.+++++++.+.|++|++++..|.++|+|+.+.+ ....+++. .+.
T Consensus 626 ~p~~pvVfVpNHRS~lDyLLLsyvL~~~GL~~P~IAAGdNLL~~P~LG~LLR~~GAFFIRRsf~~d~LYsAVLreYI~~L 705 (1108)
T PTZ00374 626 MPRVAVVLLPLHRSYIDFIIMTYLLAVMGLPLPHVCAGDDFLRMGPIATLMRGSGAFFMRRSFRDDPLYAALFKEYVRHL 705 (1108)
T ss_pred CCCCcEEEEeCCccchHHHHHHHHHHhCCCCceEEEEchhhhcchHHHHHHHHCCeEEEeCCCCchHHHHHHHHHHHHHH
Confidence 35569999999999999988876653 4789999999999999999999999999986542 22233444 455
Q ss_pred HhcCCCCeEEEeeCceecCCCccccccccccc-------------CCCceeEEEEEccCCCCCCCC-----C----CccH
Q 008641 243 ASCDRFPRVLLFPEGTTTNGKFLISFQLGAFI-------------PAYPIQPVIVRYPHVHFDQSW-----G----DVSL 300 (558)
Q Consensus 243 l~~~~~~~l~iFPEGt~s~~~~ll~Fk~Gaf~-------------~~~pI~Pv~i~y~~~~~~~~w-----~----~~~~ 300 (558)
+++|. ++.+|||||||..+.++++|.|.+. .+++|+||+|.|..-.-...+ | ..++
T Consensus 706 Lk~G~--sVeiFpEGTRSRTGKLLpPK~GlLkmalda~l~g~~~v~dV~IVPVSIsYErVlE~elyakEl~G~kK~kEsl 783 (1108)
T PTZ00374 706 VLRRR--PLEFFIEGTRSRTGKTMAPKLGLLKFICDTFYEGQQELDDVLIIPVSLSYDELLETTLYAKEQLGVSKPKENP 783 (1108)
T ss_pred HhCCC--eEEEecCcCcCCCCCcccchhhHHHHHHHHHhhcccCCCCCEEEEEEEehhhhhhHHHHHHHhcCCCCCCCCH
Confidence 77776 9999999999999999999999332 378999999999973322211 1 1122
Q ss_pred H--HHHHHHhccccceEEEEEecccCCCc
Q 008641 301 G--KLMFRMFTQFHNFMEVEYLPVVFPSD 327 (558)
Q Consensus 301 ~--~~~~~~~~~~~~~~~v~~l~pi~~~~ 327 (558)
. ....+.+....+.+.|+||+|++..+
T Consensus 784 ~~llk~ir~L~~~~GrV~V~FGEPISLre 812 (1108)
T PTZ00374 784 GNLLRARSLLKRRHGKIHVHIGEPVSLRS 812 (1108)
T ss_pred HHHHHHHHHHhccCceEEEECCCCccHHH
Confidence 2 12334455668999999999998644
No 39
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.71 E-value=1.2e-16 Score=145.23 Aligned_cols=158 Identities=20% Similarity=0.369 Sum_probs=133.8
Q ss_pred HHhhccccccChHHHHHHHHHHHhhCCCCCCcccHHHHHHHhccC-----CcHHHHHHHhhhcCCCCCceeHHHHHHHHH
Q 008641 381 MARVGSIFHISSLEAVNFLEKFLSMNPDPSGCVKLLDFLSVLRLK-----TCPLSDEIFGFIDVDKNGSITFKQFLYASA 455 (558)
Q Consensus 381 ~~~~~~~~~lt~~~~~~~~~~F~~~D~d~~G~Is~~ef~~~l~~~-----~~~~~~~lf~~~D~d~~g~Is~~Ef~~~~~ 455 (558)
++.+....+++..++.++.+-|..-+ .+|.++.++|+.+++.. .+...+.+|+.+|.|++|.|+|.||+.++.
T Consensus 14 ~e~l~~~t~f~~~ei~~~Yr~Fk~~c--P~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als 91 (193)
T KOG0044|consen 14 LEQLVQQTKFSKKEIQQWYRGFKNEC--PSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEFICALS 91 (193)
T ss_pred HHHHHHhcCCCHHHHHHHHHHhcccC--CCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHH
Confidence 34455567788899988888888744 58999999998888542 223789999999999999999999999998
Q ss_pred hhccCcchhHHHHHHhhhhCCCCCCcccHHHHHHHHHHh----C-------CCCcHHHHHHHHHHhCCCCCCceeHHHHH
Q 008641 456 HVMKLPLFWQACELAFAECDPDGNGFISENQLEVTIRPA----I-------PDLNKYEIDSLFRLFDSDGDGRVSRDDFI 524 (558)
Q Consensus 456 ~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~----~-------~~~~~~~i~~lf~~~D~d~dG~Is~~eF~ 524 (558)
....... ++.++-+|+.||.||+|+|+++|+.++++.. + ....++.++.+|+.+|.|+||.||++||.
T Consensus 92 ~~~rGt~-eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~ 170 (193)
T KOG0044|consen 92 LTSRGTL-EEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFI 170 (193)
T ss_pred HHcCCcH-HHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHH
Confidence 8777655 8899999999999999999999999998764 2 12246679999999999999999999999
Q ss_pred HHHHhCcchHHHHhhhc
Q 008641 525 CCLRKNPLLIAIFSPTL 541 (558)
Q Consensus 525 ~~l~~~~~~~~~~~~~l 541 (558)
......|.++..+..+.
T Consensus 171 ~~~~~d~~i~~~l~~~~ 187 (193)
T KOG0044|consen 171 EGCKADPSILRALEQDP 187 (193)
T ss_pred HHhhhCHHHHHHhhhcc
Confidence 99999999999887655
No 40
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.71 E-value=3.8e-16 Score=132.10 Aligned_cols=136 Identities=20% Similarity=0.233 Sum_probs=125.4
Q ss_pred ccChHHHHHHHHHHHhhCCCCCCcccHHHHHHHh---ccCCcH-HHHHHHhhhcCCCCCceeHHHHHHHHHhhccCcchh
Q 008641 389 HISSLEAVNFLEKFLSMNPDPSGCVKLLDFLSVL---RLKTCP-LSDEIFGFIDVDKNGSITFKQFLYASAHVMKLPLFW 464 (558)
Q Consensus 389 ~lt~~~~~~~~~~F~~~D~d~~G~Is~~ef~~~l---~~~~~~-~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~~~ 464 (558)
.+++.|+.+++++|..+|.|+||.|+.+++...+ |...++ ++..+++. ..|-|+|.-|+.++.......+.+
T Consensus 25 mf~q~QIqEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~~~d~elDaM~~E----a~gPINft~FLTmfGekL~gtdpe 100 (171)
T KOG0031|consen 25 MFDQSQIQEFKEAFNLMDQNRDGFIDKEDLRDMLASLGKIASDEELDAMMKE----APGPINFTVFLTMFGEKLNGTDPE 100 (171)
T ss_pred HhhHHHHHHHHHHHHHHhccCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHh----CCCCeeHHHHHHHHHHHhcCCCHH
Confidence 3789999999999999999999999999996654 666665 78888875 578999999999999998888889
Q ss_pred HHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCcHHHHHHHHHHhCCCCCCceeHHHHHHHHH
Q 008641 465 QACELAFAECDPDGNGFISENQLEVTIRPAIPDLNKYEIDSLFRLFDSDGDGRVSRDDFICCLR 528 (558)
Q Consensus 465 ~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~ 528 (558)
+.+..+|+.||.+++|.|..+.|+++|...|..++++|++.+|+.+-.|..|.++|.+|..++.
T Consensus 101 ~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~gDr~~~eEV~~m~r~~p~d~~G~~dy~~~~~~it 164 (171)
T KOG0031|consen 101 EVILNAFKTFDDEGSGKIDEDYLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFDYKAFTYIIT 164 (171)
T ss_pred HHHHHHHHhcCccCCCccCHHHHHHHHHHhcccCCHHHHHHHHHhCCcccCCceeHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999887
No 41
>smart00563 PlsC Phosphate acyltransferases. Function in phospholipid biosynthesis and have either glycerolphosphate, 1-acylglycerolphosphate, or 2-acylglycerolphosphoethanolamine acyltransferase activities. Tafazzin, the product of the gene mutated in patients with Barth syndrome, is a member of this family.
Probab=99.71 E-value=3.4e-17 Score=140.50 Aligned_cols=108 Identities=31% Similarity=0.476 Sum_probs=96.0
Q ss_pred CEEEeCCCCchhHHHHhhhcc-----cceeeccccCCCCHHHHHHHhcceEEEecCCccchHHHHHHHHHHHhcCCCCeE
Q 008641 177 PIVVSNHISYIEPIFFFYELF-----PTIVASESHDSIPFVGTIIRAMQVIYVDRFSQSSRKNAVSEIKRKASCDRFPRV 251 (558)
Q Consensus 177 ~iivsNH~S~~D~~~l~~~~~-----p~~v~k~~l~~~p~~g~~~~~~g~i~v~r~~~~~~~~~~~~~~~~l~~~~~~~l 251 (558)
.|++|||+|++|+++++..+. ..+++++.+.+.|+++++++..|.++++|..+.+..+.++++.+.+++|. ++
T Consensus 1 ~i~v~NH~s~~D~~~l~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~l~~~~--~~ 78 (118)
T smart00563 1 ALVVANHQSFLDPLVLSALLPRKGGRVRFVAKKELFYVPLLGWLLRLLGAIFIDRENGRLARAALREAVRLLRDGG--WL 78 (118)
T ss_pred CEEEECCCchHHHHHHHHHcccccCceEEEeHHHHhhccHHHHHHHHCCCeEEeCCCcHHHHHHHHHHHHHHhCCC--EE
Confidence 489999999999999988876 35789999999999999999999999999887667788888888888777 99
Q ss_pred EEeeCceecCCCccccccccccc----CCCceeEEEEEc
Q 008641 252 LLFPEGTTTNGKFLISFQLGAFI----PAYPIQPVIVRY 286 (558)
Q Consensus 252 ~iFPEGt~s~~~~ll~Fk~Gaf~----~~~pI~Pv~i~y 286 (558)
+|||||+++++..+.+|++|++. .++||+||++.|
T Consensus 79 ~ifPeG~~~~~~~~~~~~~g~~~la~~~~~~v~Pv~~~~ 117 (118)
T smart00563 79 LIFPEGTRSRPGKLLPFKKGAARLALEAGVPIVPVAIRG 117 (118)
T ss_pred EEeCCcccCCCCCcCCCcccHHHHHHHcCCCEEeEEEec
Confidence 99999999999999999999554 789999999987
No 42
>cd07989 LPLAT_AGPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.
Probab=99.71 E-value=6e-17 Score=150.86 Aligned_cols=154 Identities=27% Similarity=0.356 Sum_probs=124.0
Q ss_pred hCeEEEEEccccCC-CCCCCEEEeCCCCchhHHHHhhhc-c-cceeeccccCCCCHHHHHHHhcceEEEecCCccchHHH
Q 008641 159 FGYHWIRRKGKPAP-RQIAPIVVSNHISYIEPIFFFYEL-F-PTIVASESHDSIPFVGTIIRAMQVIYVDRFSQSSRKNA 235 (558)
Q Consensus 159 ~g~~~~~~~g~~~~-~~~~~iivsNH~S~~D~~~l~~~~-~-p~~v~k~~l~~~p~~g~~~~~~g~i~v~r~~~~~~~~~ 235 (558)
+++. +++.|.+.. +++++|+++||.|++|++++.... . ..+++++...+.|+++++++..|.++++|....+..+.
T Consensus 8 ~~~~-v~v~~~~~~~~~~~~i~~~nH~~~~D~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~ 86 (184)
T cd07989 8 LGVR-VRVEGLENLPPKGPVIIVANHQSYLDPLVLGAALPRPIRFVAKKELFKIPFLGWLLRLLGAIPIDRGNGRSAREA 86 (184)
T ss_pred eceE-EEEEccccCCCCCCEEEEECCcchHHHHHHHhhccCceEEEEhHHhhhCchHHHHHHHCCeEEEecCCchhHHHH
Confidence 3444 788887764 467889999999999987766654 2 36788888778899999999999999999876556788
Q ss_pred HHHHHHHHhcCCCCeEEEeeCceecCCCcccccccccc----cCCCceeEEEEEccCCCCCCCCCCccHHHHHHHHhccc
Q 008641 236 VSEIKRKASCDRFPRVLLFPEGTTTNGKFLISFQLGAF----IPAYPIQPVIVRYPHVHFDQSWGDVSLGKLMFRMFTQF 311 (558)
Q Consensus 236 ~~~~~~~l~~~~~~~l~iFPEGt~s~~~~ll~Fk~Gaf----~~~~pI~Pv~i~y~~~~~~~~w~~~~~~~~~~~~~~~~ 311 (558)
++++.+.+++|+ ++++||||++++++...+|++|++ +.++||+||.+.|....... + +....
T Consensus 87 ~~~~~~~l~~g~--~l~i~peg~~~~~~~~~~~~~g~~~lA~~~~~~Vvpv~~~~~~~~~~~-~-----------~~~~~ 152 (184)
T cd07989 87 LREAIEALKEGE--SVVIFPEGTRSRDGELLPFKSGAFRLAKEAGVPIVPVAISGTWGSLPK-G-----------KKLPR 152 (184)
T ss_pred HHHHHHHHHCCC--EEEEecCcccCCCCCcCCCcccHHHHHHHcCCCEEeEEEeChhhhCcC-C-----------CCcCC
Confidence 899999999998 999999999999999999999954 47999999999987643211 0 23334
Q ss_pred cceEEEEEecccCCCc
Q 008641 312 HNFMEVEYLPVVFPSD 327 (558)
Q Consensus 312 ~~~~~v~~l~pi~~~~ 327 (558)
...++|++++|+.++.
T Consensus 153 ~~~~~i~~~~pi~~~~ 168 (184)
T cd07989 153 PGRVTVRIGEPIPPEG 168 (184)
T ss_pred CCcEEEEEcCCcChhh
Confidence 6778999999999855
No 43
>cd07990 LPLAT_LCLAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as Lysocardiolipin acyltransferase 1 (LCLAT1) or 1-acyl-sn-glycerol-3-phosphate acyltransferase and similar proteins.
Probab=99.71 E-value=1.6e-17 Score=155.66 Aligned_cols=125 Identities=18% Similarity=0.139 Sum_probs=95.6
Q ss_pred hhCeEEEEEccccCC-CCCCCEEEeCCCCchhHHHHhhhcc-------cceeeccccCCCCHHHHHHHhcceEEEecCCc
Q 008641 158 SFGYHWIRRKGKPAP-RQIAPIVVSNHISYIEPIFFFYELF-------PTIVASESHDSIPFVGTIIRAMQVIYVDRFSQ 229 (558)
Q Consensus 158 ~~g~~~~~~~g~~~~-~~~~~iivsNH~S~~D~~~l~~~~~-------p~~v~k~~l~~~p~~g~~~~~~g~i~v~r~~~ 229 (558)
++|++ +.+.|.+.. +++++|++|||+|++|+++++..+. .+|++|+++.+.|++||+++..|.++|+|++.
T Consensus 7 ~~g~~-i~v~G~~~~~~~~~~iiv~NH~s~~D~~~~~~~~~~~~~~~~~~~v~K~~l~~~p~~g~~~~~~~~i~v~R~~~ 85 (193)
T cd07990 7 LSGVK-VVVYGDEPKLPKERALIISNHRSEVDWLVLWMLADRFGRLGRLKIVLKDSLKYPPLGGWGWQLGEFIFLKRKWE 85 (193)
T ss_pred ecCeE-EEEEecCccCCCccEEEEEcCCcccCHHHHHHHHHHcCccceEEeeehhhhhcCChhhHHHhhCeeEEEECChH
Confidence 35766 899998875 7789999999999999998877763 36899999999999999999999999999875
Q ss_pred cchHHHHHHHHHHHhcC-CCCeEEEeeCceecCCCcccccccccccCCCceeEEEE
Q 008641 230 SSRKNAVSEIKRKASCD-RFPRVLLFPEGTTTNGKFLISFQLGAFIPAYPIQPVIV 284 (558)
Q Consensus 230 ~~~~~~~~~~~~~l~~~-~~~~l~iFPEGt~s~~~~ll~Fk~Gaf~~~~pI~Pv~i 284 (558)
.+. +.+++..+.+++. ++.+++|||||||++.+...+++.-|.+.++|+..-++
T Consensus 86 ~d~-~~i~~~~~~l~~~~~~~~lviFPEGTr~~~~~~~~~~~~a~k~~~p~l~~vL 140 (193)
T cd07990 86 KDE-KTIKRQLKRLKDSPEPFWLLIFPEGTRFTEEKKERSQEFAEKNGLPPLKHVL 140 (193)
T ss_pred HhH-HHHHHHHHHHhcCCCCcEEEEeCcccCCCHHHHHHHHHHHHHcCCCCcceee
Confidence 544 4445555555542 22499999999999888766555445555555554443
No 44
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.68 E-value=4.6e-16 Score=129.43 Aligned_cols=139 Identities=18% Similarity=0.228 Sum_probs=123.1
Q ss_pred ccChHHHHHHHHHHHhhCCCCCCcccHHHH---HHHhccCCcH-HHHHHHhhhcCC--CCCceeHHHHHHHHHhhccCcc
Q 008641 389 HISSLEAVNFLEKFLSMNPDPSGCVKLLDF---LSVLRLKTCP-LSDEIFGFIDVD--KNGSITFKQFLYASAHVMKLPL 462 (558)
Q Consensus 389 ~lt~~~~~~~~~~F~~~D~d~~G~Is~~ef---~~~l~~~~~~-~~~~lf~~~D~d--~~g~Is~~Ef~~~~~~~~~~~~ 462 (558)
..+.+++.+++++|..||..+||+|+..+. .++||.+|++ ++.+....++.+ +-.+|+|++|+.++..+.+...
T Consensus 4 ~~~~d~~~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vaknk~ 83 (152)
T KOG0030|consen 4 AFTPDQMEEFKEAFLLFDRTGDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKNKD 83 (152)
T ss_pred ccCcchHHHHHHHHHHHhccCcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhccc
Confidence 356788899999999999999999999988 6778999987 889999888877 5578999999999987766532
Q ss_pred --hhHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCcHHHHHHHHHHhCCCCCCceeHHHHHHHHH
Q 008641 463 --FWQACELAFAECDPDGNGFISENQLEVTIRPAIPDLNKYEIDSLFRLFDSDGDGRVSRDDFICCLR 528 (558)
Q Consensus 463 --~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~ 528 (558)
+.+++-.-++.||++++|.|...||+++|..+|+.++++|++++.+-.. |++|.|+|++|++.+.
T Consensus 84 q~t~edfvegLrvFDkeg~G~i~~aeLRhvLttlGekl~eeEVe~Llag~e-D~nG~i~YE~fVk~i~ 150 (152)
T KOG0030|consen 84 QGTYEDFVEGLRVFDKEGNGTIMGAELRHVLTTLGEKLTEEEVEELLAGQE-DSNGCINYEAFVKHIM 150 (152)
T ss_pred cCcHHHHHHHHHhhcccCCcceeHHHHHHHHHHHHhhccHHHHHHHHcccc-ccCCcCcHHHHHHHHh
Confidence 3678888899999999999999999999999999999999999999875 8899999999998654
No 45
>KOG2898 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=99.66 E-value=1.9e-16 Score=155.89 Aligned_cols=251 Identities=19% Similarity=0.266 Sum_probs=174.5
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCchhHHHHHHHHH-HHHHHHHHHhhCeEEEEEccccCC
Q 008641 94 EFVKIVVCFPIVLIRLVLFGFCLLVGYLATKLALEGWKDKQNPMPVWRSRLMWVT-RVCSRCILFSFGYHWIRRKGKPAP 172 (558)
Q Consensus 94 ~~~~~~l~~pl~~~r~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~g~~~~~~~g~~~~ 172 (558)
..+|++++.|+.++ ...++.++..+...+... . .....|......+. ..+.+++-+.+-.. +........
T Consensus 64 ~~vRy~~~~p~ri~---~~~~~~~l~~~~~~~l~~--~---p~~~~~~~~~~~~~~~~c~~llsra~~~~-i~~~~~~~~ 134 (354)
T KOG2898|consen 64 FVVRYLILNPLRII---DHNLVVLLTTCLSPLLGH--V---PSSIFWEFSSSVALGLLCFRLLSRAKSLR-ISFHDELLL 134 (354)
T ss_pred eEEEEEEecccchH---HHHHHHHHHHHhhhheec--c---ccchhhhHHHHHHhhhhhhhHHHHHhhhh-hcccChhhc
Confidence 35778888887553 333332222222211111 1 22334444433333 34445555554433 455555444
Q ss_pred CCCCCEEEeCCCCchhHHHHhhhcccceeecccc-CCCCH-HHHHHHhcceEEEecCCccchHHHHHHHHHHHhcCCCCe
Q 008641 173 RQIAPIVVSNHISYIEPIFFFYELFPTIVASESH-DSIPF-VGTIIRAMQVIYVDRFSQSSRKNAVSEIKRKASCDRFPR 250 (558)
Q Consensus 173 ~~~~~iivsNH~S~~D~~~l~~~~~p~~v~k~~l-~~~p~-~g~~~~~~g~i~v~r~~~~~~~~~~~~~~~~l~~~~~~~ 250 (558)
..++.+.|+||+|.+|.+++ ....+..+..+.. ..+.+ .+.+.+....++..|....++.-..++..++...++..+
T Consensus 135 ~~~g~i~v~nh~Sp~d~~vl-s~~~~~~~v~q~~~~~v~viq~~~~~~s~~~~f~~~e~~d~~~~~~~~~e~~~~~~~~~ 213 (354)
T KOG2898|consen 135 FPEGGICVANHFSPWDVLVL-SVDNCYALVGQVHGGLVGVIQLALSRASLHFWFERLEFTDRQVVAKRLAEHVWNERKEP 213 (354)
T ss_pred CCCCCCceecccCceeEEEe-ccccchheeeecccceEEEeeehhhhhchhhhhhcchhhhhHhhhhhhhHHHhcCCCCc
Confidence 44447999999999994444 3333333333221 11111 244556666777777766666666777777777666568
Q ss_pred EEEeeCceecCCCcccccc-cccccCCCceeEEEEEccCCCCCCCCC--CccHHHHHHHHhccccceEEEEEecccCCCc
Q 008641 251 VLLFPEGTTTNGKFLISFQ-LGAFIPAYPIQPVIVRYPHVHFDQSWG--DVSLGKLMFRMFTQFHNFMEVEYLPVVFPSD 327 (558)
Q Consensus 251 l~iFPEGt~s~~~~ll~Fk-~Gaf~~~~pI~Pv~i~y~~~~~~~~w~--~~~~~~~~~~~~~~~~~~~~v~~l~pi~~~~ 327 (558)
+++||||||.|+..+..|| +|-|+.+..|.|++|+|...++++.|. ..++..++..+++.+...+.+.+++|+..
T Consensus 214 ii~fpegtCinn~~~~~fk~k~~~e~~~~i~pvaik~~~~~~~~f~~s~~~s~~~~l~~~~ts~~~v~~i~~l~~~~r-- 291 (354)
T KOG2898|consen 214 ILLFPEGTCINNTKVMQFKLKGSFEEGVKIYPVAIKYDPRFGDAFWNSPELSFTRYLLELMTSWAIVCDIWYLPPMRR-- 291 (354)
T ss_pred EEEeecceeeCCceeEEEecCCChhhcceeeeeeeecCccccccccCCccccHHHHHHHHHhhhheeeeeeecccEEe--
Confidence 9999999999999999999 999999999999999999999999995 44788999999999999999999999998
Q ss_pred ccccCHHHHHHHHHHHHHHhcCCcccCCc
Q 008641 328 NQKENALRFAERTSHAMASALNAVQTSHA 356 (558)
Q Consensus 328 ~~~~~~~~~~~~v~~~i~~~l~~~~~~~~ 356 (558)
.+.++.-+++.++..++++..++....++
T Consensus 292 ~~~et~t~~a~~v~~~ig~~~gl~~~~~d 320 (354)
T KOG2898|consen 292 DNDETATQFANRVKSLIGKSAGLKDLEWD 320 (354)
T ss_pred ecccchhHHHHHHHHHHHHhhCCcccCcC
Confidence 55689999999999999999999999887
No 46
>PRK11915 glycerol-3-phosphate acyltransferase; Reviewed
Probab=99.63 E-value=2.5e-15 Score=158.51 Aligned_cols=180 Identities=13% Similarity=0.124 Sum_probs=128.3
Q ss_pred CCCCCCEEEeCCCCchhHHHHhhhcc-----cceeeccccCCCCHHHHHHHhcceEEEecCCccch--HHHH-HHHHHHH
Q 008641 172 PRQIAPIVVSNHISYIEPIFFFYELF-----PTIVASESHDSIPFVGTIIRAMQVIYVDRFSQSSR--KNAV-SEIKRKA 243 (558)
Q Consensus 172 ~~~~~~iivsNH~S~~D~~~l~~~~~-----p~~v~k~~l~~~p~~g~~~~~~g~i~v~r~~~~~~--~~~~-~~~~~~l 243 (558)
.++.|.|+++||.|++|.+++.+.+. |.+++.......|.+|.+++.+|.+++.|...... ...+ +.+...+
T Consensus 112 ~~~~pvIfvp~HrS~lDylllsyvL~~~~l~~~~~~ag~nl~~~~lg~~lr~~GafFirRsf~~~~LY~~vl~eYi~~ll 191 (621)
T PRK11915 112 DRKATLAFAFSHRSYLDGMLLPEVILANRLSPALTFGGANLNFFPMGAWAKRTGAIFIRRQTKDIPVYRFVLRAYAAQLV 191 (621)
T ss_pred ccCCCEEEEeccccccHHHHHHHHHHHcCCCCceeehhhhhcchhHHHHHHhCCcEEeccCCCCchHHHHHHHHHHHHHH
Confidence 35678899999999999988887553 23444444556778999999999999999765543 2445 5555666
Q ss_pred hcCCCCeEEEeeCceecCCCccccccccccc-----------CCCceeEEEEEccCCCCCCCC-----C----Ccc--HH
Q 008641 244 SCDRFPRVLLFPEGTTTNGKFLISFQLGAFI-----------PAYPIQPVIVRYPHVHFDQSW-----G----DVS--LG 301 (558)
Q Consensus 244 ~~~~~~~l~iFPEGt~s~~~~ll~Fk~Gaf~-----------~~~pI~Pv~i~y~~~~~~~~w-----~----~~~--~~ 301 (558)
++|. ++.+||||+||..+.+++.|.|... .+++|+||+|.|.+..-...+ | ..+ .+
T Consensus 192 ~~G~--~le~F~EG~RSRtGkll~Pk~GlLs~vv~~~~~~~~~dV~iVPVsI~YDrV~E~~~y~~El~G~~K~~Esl~~l 269 (621)
T PRK11915 192 QNHV--NLTWSIEGGRTRTGKLRPPVFGILRYITDAVDEIDGPEVYLVPTSIVYDQLHEVEAMTTEAYGAVKRPEDLRFL 269 (621)
T ss_pred hCCC--cEEEEeCCCCCCCCCCCCCchhhHHHHHHHHhcCCCCCeEEEEEEEeecccccHHHHHHHhcCCCCCccHHHHH
Confidence 6776 9999999999999999999999332 789999999999985433222 1 112 12
Q ss_pred HHHHHHhccccceEEEEEecccCCCcc----------cccCHHHHHHHHHHHHHHhcCCccc
Q 008641 302 KLMFRMFTQFHNFMEVEYLPVVFPSDN----------QKENALRFAERTSHAMASALNAVQT 353 (558)
Q Consensus 302 ~~~~~~~~~~~~~~~v~~l~pi~~~~~----------~~~~~~~~~~~v~~~i~~~l~~~~~ 353 (558)
....+.+....+.+.|+|++|++..+. .....+.++.+|...|.+...+.++
T Consensus 270 ~~~~~~l~~~~G~i~V~FgePisL~~~l~~~~~~~~~~~~~v~~La~~V~~~In~~~~v~p~ 331 (621)
T PRK11915 270 VRLARQQGERLGRAYLDFGEPLPLRKRLQELRADKSGTGSEIERIALDVEHRINRATPVTPT 331 (621)
T ss_pred HHHHHHHhhcCceEEEECCCCccHHHHHhhhccCcccchhHHHHHHHHHHHHHhhcccCCHH
Confidence 222344445578999999999987553 1234567778888877777554443
No 47
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.63 E-value=6.5e-15 Score=132.96 Aligned_cols=138 Identities=24% Similarity=0.292 Sum_probs=123.3
Q ss_pred HHHHHHHHHhhCCCCCCcccHHHHHHHhcc-CC---c-HHHHHHHhhhcCCCCCceeHHHHHHHHHhhccCcchhHHHHH
Q 008641 395 AVNFLEKFLSMNPDPSGCVKLLDFLSVLRL-KT---C-PLSDEIFGFIDVDKNGSITFKQFLYASAHVMKLPLFWQACEL 469 (558)
Q Consensus 395 ~~~~~~~F~~~D~d~~G~Is~~ef~~~l~~-~~---~-~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~~~~~~~~ 469 (558)
-..+...|...|+|++|.|+.+|+.++|.. .. + +.++.|+..||.+.+|+|+++||..++..+ ..++.
T Consensus 56 ~~~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~i-------~~Wr~ 128 (221)
T KOG0037|consen 56 FPQLAGWFQSVDRDRSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKYI-------NQWRN 128 (221)
T ss_pred cHHHHHHHHhhCccccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHH-------HHHHH
Confidence 346778899999999999999999999852 21 1 378999999999999999999999999765 45899
Q ss_pred HhhhhCCCCCCcccHHHHHHHHHHhCCCCcHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCcchHHHHhh
Q 008641 470 AFAECDPDGNGFISENQLEVTIRPAIPDLNKYEIDSLFRLFDSDGDGRVSRDDFICCLRKNPLLIAIFSP 539 (558)
Q Consensus 470 ~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~~~~~~~~~~~~ 539 (558)
+|+.||.|++|.|+..||+.+|..+|..++++-.+.+++.+|.-++|.|.+++|++++.....+.+.|..
T Consensus 129 vF~~~D~D~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~L~~lt~~Fr~ 198 (221)
T KOG0037|consen 129 VFRTYDRDRSGTIDSSELRQALTQLGYRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVVLQRLTEAFRR 198 (221)
T ss_pred HHHhcccCCCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhccccCCceeHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999997779999999999999988777776654
No 48
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=99.52 E-value=2.4e-13 Score=133.02 Aligned_cols=138 Identities=15% Similarity=0.207 Sum_probs=123.3
Q ss_pred ccChHHHHHHHHHHHhhCCCCCCcccHHHHHHHh---ccC-C-cHHHHHHHhhhcCCCCCceeHHHHHHHHHhhccCcch
Q 008641 389 HISSLEAVNFLEKFLSMNPDPSGCVKLLDFLSVL---RLK-T-CPLSDEIFGFIDVDKNGSITFKQFLYASAHVMKLPLF 463 (558)
Q Consensus 389 ~lt~~~~~~~~~~F~~~D~d~~G~Is~~ef~~~l---~~~-~-~~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~~ 463 (558)
....+...+++.+|+.+|.+++|.++..++.+.+ ... + .+..+.+|+..|.|.||.++|+||...+...
T Consensus 7 ~~~~er~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~~------ 80 (463)
T KOG0036|consen 7 ETDEERDIRIRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDNK------ 80 (463)
T ss_pred CCcHHHHHHHHHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHHHh------
Confidence 3456666789999999999999999999998555 333 2 2378899999999999999999999988643
Q ss_pred hHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCcHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCcc
Q 008641 464 WQACELAFAECDPDGNGFISENQLEVTIRPAIPDLNKYEIDSLFRLFDSDGDGRVSRDDFICCLRKNPL 532 (558)
Q Consensus 464 ~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~~~~~ 532 (558)
+.++..+|+..|.++||.|+.+|+.+.|+..|.+++++++.++|+.+|+|+++.|+++||.+.+.-+|+
T Consensus 81 E~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~~gi~l~de~~~k~~e~~d~~g~~~I~~~e~rd~~ll~p~ 149 (463)
T KOG0036|consen 81 ELELYRIFQSIDLEHDGKIDPNEIWRYLKDLGIQLSDEKAAKFFEHMDKDGKATIDLEEWRDHLLLYPE 149 (463)
T ss_pred HHHHHHHHhhhccccCCccCHHHHHHHHHHhCCccCHHHHHHHHHHhccCCCeeeccHHHHhhhhcCCh
Confidence 678999999999999999999999999999999999999999999999999999999999999998873
No 49
>KOG1505 consensus Lysophosphatidic acid acyltransferase LPAAT and related acyltransferases [Lipid transport and metabolism]
Probab=99.45 E-value=5.7e-13 Score=133.23 Aligned_cols=125 Identities=18% Similarity=0.239 Sum_probs=91.2
Q ss_pred EccccCCCCCCCEEEeCCCCchhHHHHhhhccc-------ceeeccccCCCCHHHHHHHhcceEEEecCCccchHHHHHH
Q 008641 166 RKGKPAPRQIAPIVVSNHISYIEPIFFFYELFP-------TIVASESHDSIPFVGTIIRAMQVIYVDRFSQSSRKNAVSE 238 (558)
Q Consensus 166 ~~g~~~~~~~~~iivsNH~S~~D~~~l~~~~~p-------~~v~k~~l~~~p~~g~~~~~~g~i~v~r~~~~~~~~~~~~ 238 (558)
..|.. ..++++|++|||+|.+|+++++..... ++++|.++...|++||.++..|.|+++|+...+. +.+..
T Consensus 63 ~~~~~-~~~e~alli~NH~~~~Dwl~~w~~~~~~G~l~~~~~~lK~~lk~~Pi~Gw~~~~~~fiFl~R~~~~d~-~~l~~ 140 (346)
T KOG1505|consen 63 VTGDK-YGKERALLIANHQSEVDWLYLWTYAQRKGVLGNVKIVLKKSLKYLPIFGWGMWFHGFIFLERNWEKDE-KTLIS 140 (346)
T ss_pred ccccc-cCCCceEEEeccccccchhhHHHHHhcCCchhhhhHHHhhHHHhCcchheeeeecceEEEecchhhhH-HHHHH
Confidence 34444 567889999999999999999855432 5789999999999999999999999999987765 66666
Q ss_pred HHHHHhc-CCCCeEEEeeCceecCCC------------------ccccccccccc-------CCC-ceeEEEEEccCCCC
Q 008641 239 IKRKASC-DRFPRVLLFPEGTTTNGK------------------FLISFQLGAFI-------PAY-PIQPVIVRYPHVHF 291 (558)
Q Consensus 239 ~~~~l~~-~~~~~l~iFPEGt~s~~~------------------~ll~Fk~Gaf~-------~~~-pI~Pv~i~y~~~~~ 291 (558)
..+++++ .++.++++|||||+-... .++=.+.|+|. ..+ -|.-++|.|.....
T Consensus 141 ~~k~l~~~~~~~wLlLFPEGT~~~~~~~~~S~~fa~k~GLp~l~nvLlPRt~Gf~~~l~~lr~~l~~IyD~Ti~y~~~~~ 220 (346)
T KOG1505|consen 141 LLKHLKDSPDPYWLLLFPEGTRFTEKKHERSQEFAAKNGLPHLKNVLLPRTKGFKAALEELRNSLDAIYDVTIGYSKAEP 220 (346)
T ss_pred HHHHhccCCCceEEEEecCCCcccHHHHHHHHHHHHHcCCCCccceeccCcchHHHHHHHhcCCCceEEEEEEecCCCCC
Confidence 6666655 444699999999964222 12223444443 222 37788998887543
Q ss_pred C
Q 008641 292 D 292 (558)
Q Consensus 292 ~ 292 (558)
+
T Consensus 221 ~ 221 (346)
T KOG1505|consen 221 P 221 (346)
T ss_pred C
Confidence 3
No 50
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=99.45 E-value=2.4e-12 Score=107.86 Aligned_cols=159 Identities=21% Similarity=0.322 Sum_probs=129.6
Q ss_pred HHhhccccccChHHHHHHHHHHHhhCCCC-----------CCcccHHHHHHHhccCCcHHHHHHHhhhcCCCCCceeHHH
Q 008641 381 MARVGSIFHISSLEAVNFLEKFLSMNPDP-----------SGCVKLLDFLSVLRLKTCPLSDEIFGFIDVDKNGSITFKQ 449 (558)
Q Consensus 381 ~~~~~~~~~lt~~~~~~~~~~F~~~D~d~-----------~G~Is~~ef~~~l~~~~~~~~~~lf~~~D~d~~g~Is~~E 449 (558)
+...+...-+|..++-++...|..+.++- .-++..+.+.+.-.+..++.-+++.+.|..||+|.++|++
T Consensus 13 Ld~YQDCTFFtrKdIlrl~~Rf~~L~P~lVP~~~~~~~~~~v~vp~e~i~kMPELkenpfk~ri~e~FSeDG~Gnlsfdd 92 (189)
T KOG0038|consen 13 LDEYQDCTFFTRKDILRLHKRFYELAPHLVPTDMTGNRPPIVKVPFELIEKMPELKENPFKRRICEVFSEDGRGNLSFDD 92 (189)
T ss_pred HhhhcccccccHHHHHHHHHHHHHhCcccccccccCCCCCceeecHHHHhhChhhhcChHHHHHHHHhccCCCCcccHHH
Confidence 34445566678888888888888775531 1246666666665666666778899999999999999999
Q ss_pred HHHHHHhhccCcchhHHHHHHhhhhCCCCCCcccHHHHHHHHHHhC-CCCcHHHH----HHHHHHhCCCCCCceeHHHHH
Q 008641 450 FLYASAHVMKLPLFWQACELAFAECDPDGNGFISENQLEVTIRPAI-PDLNKYEI----DSLFRLFDSDGDGRVSRDDFI 524 (558)
Q Consensus 450 f~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~-~~~~~~~i----~~lf~~~D~d~dG~Is~~eF~ 524 (558)
|+.++..++.....+-++..+|+.||-|+|++|..+++...+.++- ..++++|+ ++++++.|.||||++++.||.
T Consensus 93 FlDmfSV~sE~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~eLs~eEv~~i~ekvieEAD~DgDgkl~~~eFe 172 (189)
T KOG0038|consen 93 FLDMFSVFSEMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRDELSDEEVELICEKVIEEADLDGDGKLSFAEFE 172 (189)
T ss_pred HHHHHHHHHhhChHHhhhhheeEEeecCCCCcccHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcCCCCCcccHHHHH
Confidence 9999988877766677889999999999999999999999998873 46788774 567889999999999999999
Q ss_pred HHHHhCcchHHHHhh
Q 008641 525 CCLRKNPLLIAIFSP 539 (558)
Q Consensus 525 ~~l~~~~~~~~~~~~ 539 (558)
.++.+.|++++-|+.
T Consensus 173 ~~i~raPDFlsTFHI 187 (189)
T KOG0038|consen 173 HVILRAPDFLSTFHI 187 (189)
T ss_pred HHHHhCcchHhhhee
Confidence 999999999987764
No 51
>cd07984 LPLAT_LABLAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LABLAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as lipid A biosynthesis lauroyl/myristoyl (LABLAT, HtrB) acyltransferases and similar proteins.
Probab=99.44 E-value=9.8e-13 Score=123.33 Aligned_cols=159 Identities=16% Similarity=0.200 Sum_probs=119.3
Q ss_pred EEEccccCC-----CCCCCEEEeCCCCchhHHHHhhhc-c-c-ceeeccccCCCCHHHHHHH----hcceEEEecCCccc
Q 008641 164 IRRKGKPAP-----RQIAPIVVSNHISYIEPIFFFYEL-F-P-TIVASESHDSIPFVGTIIR----AMQVIYVDRFSQSS 231 (558)
Q Consensus 164 ~~~~g~~~~-----~~~~~iivsNH~S~~D~~~l~~~~-~-p-~~v~k~~l~~~p~~g~~~~----~~g~i~v~r~~~~~ 231 (558)
+.+.|.+.. ..+++|+++||.|.+|++...... . + .++.+.. +.|++++++. ..|..+|+|+
T Consensus 4 ~~i~~~e~l~~~~~~~~~~il~~~H~g~~e~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~~~~r~~~g~~~i~~~---- 77 (192)
T cd07984 4 VEREGLEHLEAALAKGKGVILLTAHFGNWELAGLALALLGYPVTVVYRPL--KNPLLDRLITRGRERFGARLIPRG---- 77 (192)
T ss_pred eEecCHHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhcCCCeeEEEECC--CCHHHHHHHHHHHHhcCCeeEcCC----
Confidence 556665442 246889999999999987665554 2 2 4566553 5678887776 3678888875
Q ss_pred hHHHHHHHHHHHhcCCCCeEEEeeCceecCCC-cccc-------cccccc----cCCCceeEEEEEccCCCCCCCCCCcc
Q 008641 232 RKNAVSEIKRKASCDRFPRVLLFPEGTTTNGK-FLIS-------FQLGAF----IPAYPIQPVIVRYPHVHFDQSWGDVS 299 (558)
Q Consensus 232 ~~~~~~~~~~~l~~~~~~~l~iFPEGt~s~~~-~ll~-------Fk~Gaf----~~~~pI~Pv~i~y~~~~~~~~w~~~~ 299 (558)
..++++.+.+++|+ .++|||||+++..+ ...+ |+.|++ ..++||+|+.+.+..
T Consensus 78 --~~~~~~~~~l~~g~--~v~i~pD~~~~~~~~~~~~F~G~~~~~~~G~~~lA~~~~~pivp~~~~~~~----------- 142 (192)
T cd07984 78 --GGLRELIRALKKGE--IVGILPDQDPGRKGGVFVPFFGRPAATPTGPARLALKTGAPVVPAFAYRLP----------- 142 (192)
T ss_pred --chHHHHHHHHhCCC--EEEEEeCCCCCCCCCEEeccCCCCccchHHHHHHHHHHCCcEEEEEEEEcC-----------
Confidence 46677888899998 99999999998654 3444 478844 489999999997652
Q ss_pred HHHHHHHHhccccceEEEEEecccCCCcccccCHHHHHHHHHHHHHHhcCCcccCCch
Q 008641 300 LGKLMFRMFTQFHNFMEVEYLPVVFPSDNQKENALRFAERTSHAMASALNAVQTSHAY 357 (558)
Q Consensus 300 ~~~~~~~~~~~~~~~~~v~~l~pi~~~~~~~~~~~~~~~~v~~~i~~~l~~~~~~~~~ 357 (558)
.+.++|++++|+++.. .++.+++++++.+.+.+.+...+.+|-+
T Consensus 143 ------------~~~~~i~~~~~i~~~~--~~~~~~~~~~~~~~lE~~i~~~P~qw~w 186 (192)
T cd07984 143 ------------GGGYRIEFEPPLENPP--SEDVEEDTQRLNDALEAAIREHPEQWLW 186 (192)
T ss_pred ------------CCCEEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHhCchhhee
Confidence 2457899999998743 5788999999999999998888877754
No 52
>KOG2847 consensus Phosphate acyltransferase [Lipid transport and metabolism]
Probab=99.41 E-value=1e-12 Score=120.39 Aligned_cols=162 Identities=19% Similarity=0.227 Sum_probs=118.1
Q ss_pred HhhCeEEEEEcccc--------CCCCCCCEEEeCCCCchhHHHHhhhccc---------ce--eeccccCCCCHHHHHHH
Q 008641 157 FSFGYHWIRRKGKP--------APRQIAPIVVSNHISYIEPIFFFYELFP---------TI--VASESHDSIPFVGTIIR 217 (558)
Q Consensus 157 ~~~g~~~~~~~g~~--------~~~~~~~iivsNH~S~~D~~~l~~~~~p---------~~--v~k~~l~~~p~~g~~~~ 217 (558)
+..|+.+..+.+.+ .++..|.|-||||.|.+|-.+++..+.+ ++ .|.+-.+..|+...+++
T Consensus 43 ~~~g~Nk~~v~n~e~l~~l~~~Rp~n~PLiTVSNH~S~vDDP~~W~~L~~~~f~~~~~~RWtlaAhdICF~n~~~S~fFs 122 (286)
T KOG2847|consen 43 LMTGYNKLLVHNRETLTALLESRPPNRPLITVSNHMSCVDDPLVWGILKLRLFLNLKNIRWTLAAHDICFTNPFHSNFFS 122 (286)
T ss_pred HHhcccccccccHHHHHHHHHcCCCCCCeEEEecchhccCCceeEEEechhhhcchhhhheehhhhhchhccHHHHHHHh
Confidence 34455555555532 3456677889999999987777666543 23 23333688899999999
Q ss_pred hcceEEEecCCccchHHHHHHHHHHHhcCCCCeEEEeeCceec-CCCccccccccc--ccCCCceeEEEEEccCCCCCCC
Q 008641 218 AMQVIYVDRFSQSSRKNAVSEIKRKASCDRFPRVLLFPEGTTT-NGKFLISFQLGA--FIPAYPIQPVIVRYPHVHFDQS 294 (558)
Q Consensus 218 ~~g~i~v~r~~~~~~~~~~~~~~~~l~~~~~~~l~iFPEGt~s-~~~~ll~Fk~Ga--f~~~~pI~Pv~i~y~~~~~~~~ 294 (558)
...++|+.|+..- .++.++.+.++++.|. ||-|||||... .+...++||-|. ....+|..||.+-.-++.+...
T Consensus 123 lGkclPi~RG~Gv-YQ~gmd~~i~kLn~g~--WVHiFPEGkV~q~~~~~~rfKWGigRlI~ea~~~PIVlPi~h~Gmedi 199 (286)
T KOG2847|consen 123 LGKCLPIVRGEGV-YQKGMDFAIEKLNDGS--WVHIFPEGKVNQMEKEMLRFKWGIGRLILEAPKPPIVLPIWHTGMEDI 199 (286)
T ss_pred cCceEeeeccCcc-ccccHHHHHHhcCCCC--eEEECCCceeeccccchhheeccceeeeecCCCCCEEeehhhhhHHHh
Confidence 9999999997543 5778999999999998 99999999998 777899999994 3467777777775444434333
Q ss_pred CCCccHHHHHHHHhccccceEEEEEecccCCCc
Q 008641 295 WGDVSLGKLMFRMFTQFHNFMEVEYLPVVFPSD 327 (558)
Q Consensus 295 w~~~~~~~~~~~~~~~~~~~~~v~~l~pi~~~~ 327 (558)
|+... -...++..+++|.+|+|+..++
T Consensus 200 ~P~~~------p~vp~~Gk~vtV~IG~P~~~~d 226 (286)
T KOG2847|consen 200 MPEAP------PYVPRFGKTVTVTIGDPINFDD 226 (286)
T ss_pred CccCC------CccCCCCCEEEEEeCCCcchhH
Confidence 43331 1234568899999999999754
No 53
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.27 E-value=3e-11 Score=108.40 Aligned_cols=103 Identities=23% Similarity=0.283 Sum_probs=92.4
Q ss_pred HHHHHHhhhcCCCCCceeHHHHHHHHHhhccCcchhHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCC-----cHHHH
Q 008641 429 LSDEIFGFIDVDKNGSITFKQFLYASAHVMKLPLFWQACELAFAECDPDGNGFISENQLEVTIRPAIPDL-----NKYEI 503 (558)
Q Consensus 429 ~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~-----~~~~i 503 (558)
++.++|+.+|.+++|.|+-+|+..++..+..... +.++..+++.+|.|++|.|+++||..++...+... +.+++
T Consensus 9 el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t-~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~~~~~el 87 (151)
T KOG0027|consen 9 ELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPT-EEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEEASSEEL 87 (151)
T ss_pred HHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCC-HHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccccccccHHHH
Confidence 6889999999999999999999999988876644 89999999999999999999999999998876432 35699
Q ss_pred HHHHHHhCCCCCCceeHHHHHHHHHhCcc
Q 008641 504 DSLFRLFDSDGDGRVSRDDFICCLRKNPL 532 (558)
Q Consensus 504 ~~lf~~~D~d~dG~Is~~eF~~~l~~~~~ 532 (558)
.++|+.+|.|++|+|+.+|+..+|.+..+
T Consensus 88 ~eaF~~fD~d~~G~Is~~el~~~l~~lg~ 116 (151)
T KOG0027|consen 88 KEAFRVFDKDGDGFISASELKKVLTSLGE 116 (151)
T ss_pred HHHHHHHccCCCCcCcHHHHHHHHHHhCC
Confidence 99999999999999999999999987643
No 54
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.22 E-value=5.7e-11 Score=113.79 Aligned_cols=130 Identities=23% Similarity=0.294 Sum_probs=108.4
Q ss_pred HHHHHHHHHhhCCCCCCcccHHHHHHHhccCCcH-----HHHHHHhhhcCCCCCceeHHHHHHHHHhhccCcch----hH
Q 008641 395 AVNFLEKFLSMNPDPSGCVKLLDFLSVLRLKTCP-----LSDEIFGFIDVDKNGSITFKQFLYASAHVMKLPLF----WQ 465 (558)
Q Consensus 395 ~~~~~~~F~~~D~d~~G~Is~~ef~~~l~~~~~~-----~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~~----~~ 465 (558)
+.+-++.|+..|.|++|.+|++||...|.-...+ .+++-+...|+|+||.|+++||+.-+......... ..
T Consensus 162 ~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~~~~~epeWv~~ 241 (325)
T KOG4223|consen 162 IARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHEGNEEEPEWVLT 241 (325)
T ss_pred HHHHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhccCCCCCcccccc
Confidence 4556788999999999999999999998643332 57788899999999999999999887665542211 12
Q ss_pred HHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCcHHHHHHHHHHhCCCCCCceeHHHHH
Q 008641 466 ACELAFAECDPDGNGFISENQLEVTIRPAIPDLNKYEIDSLFRLFDSDGDGRVSRDDFI 524 (558)
Q Consensus 466 ~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D~d~dG~Is~~eF~ 524 (558)
+-.+.+...|+|+||+++.+|++..+...+....+.+++.++-+.|.|+||++|++|.+
T Consensus 242 Ere~F~~~~DknkDG~L~~dEl~~WI~P~~~d~A~~EA~hL~~eaD~dkD~kLs~eEIl 300 (325)
T KOG4223|consen 242 EREQFFEFRDKNKDGKLDGDELLDWILPSEQDHAKAEARHLLHEADEDKDGKLSKEEIL 300 (325)
T ss_pred cHHHHHHHhhcCCCCccCHHHHhcccCCCCccHHHHHHHHHhhhhccCccccccHHHHh
Confidence 34567788899999999999999999887778889999999999999999999999965
No 55
>PLN02964 phosphatidylserine decarboxylase
Probab=99.21 E-value=1.7e-10 Score=123.77 Aligned_cols=118 Identities=17% Similarity=0.247 Sum_probs=100.1
Q ss_pred cccChHHHHHHHHHHHhhCCCCCCcccHHHHHHHhc-cCCcH-H---HHHHHhhhcCCCCCceeHHHHHHHHHhhccCcc
Q 008641 388 FHISSLEAVNFLEKFLSMNPDPSGCVKLLDFLSVLR-LKTCP-L---SDEIFGFIDVDKNGSITFKQFLYASAHVMKLPL 462 (558)
Q Consensus 388 ~~lt~~~~~~~~~~F~~~D~d~~G~Is~~ef~~~l~-~~~~~-~---~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~ 462 (558)
..++..|.++++++|..+|+|++|++ ...+.+.+| ..+++ + ++++|+.+|.|++|.|+++||+.++..+. ...
T Consensus 135 t~f~~kqi~elkeaF~lfD~dgdG~i-Lg~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg-~~~ 212 (644)
T PLN02964 135 FDFVTQEPESACESFDLLDPSSSNKV-VGSIFVSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFG-NLV 212 (644)
T ss_pred hhccHHHHHHHHHHHHHHCCCCCCcC-HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhc-cCC
Confidence 56788899999999999999999998 777777888 46665 2 79999999999999999999999998654 345
Q ss_pred hhHHHHHHhhhhCCCCCCcccHHHHHHHHHH-------------hCCCCcH-HHHHHHH
Q 008641 463 FWQACELAFAECDPDGNGFISENQLEVTIRP-------------AIPDLNK-YEIDSLF 507 (558)
Q Consensus 463 ~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~-------------~~~~~~~-~~i~~lf 507 (558)
.+++++.+|+.+|.|++|+|+.+||++++.. ++..++. ++++.|.
T Consensus 213 seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~~~~~~~~~~~cp~cg~~l~~~~~~~~ii 271 (644)
T PLN02964 213 AANKKEELFKAADLNGDGVVTIDELAALLALQQEQEPIINNCPVCGEALGVSDKLNAMI 271 (644)
T ss_pred CHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhcccCcchhhhchhhcCcccchhhHHHHH
Confidence 5889999999999999999999999999998 5655655 5555555
No 56
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.17 E-value=3.5e-10 Score=99.64 Aligned_cols=101 Identities=21% Similarity=0.218 Sum_probs=90.6
Q ss_pred HHHHHHhhhcCCCCCceeHHHHHHHHHhhccCcchhHHHHHHhhhhCCCCCCcccHHHHHHHHHHhC-CCCcHHHHHHHH
Q 008641 429 LSDEIFGFIDVDKNGSITFKQFLYASAHVMKLPLFWQACELAFAECDPDGNGFISENQLEVTIRPAI-PDLNKYEIDSLF 507 (558)
Q Consensus 429 ~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~-~~~~~~~i~~lf 507 (558)
++++.|..+|.|++|.|++.|+..+++.+.. ..++..+..+|..+|. ++|.|++.+|..++.... ..-+++++..+|
T Consensus 21 ~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~-~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~~~~~Eel~~aF 98 (160)
T COG5126 21 ELKEAFQLFDRDSDGLIDRNELGKILRSLGF-NPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLKRGDKEEELREAF 98 (160)
T ss_pred HHHHHHHHhCcCCCCCCcHHHHHHHHHHcCC-CCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 6799999999999999999999999985554 4558999999999999 999999999999998765 456799999999
Q ss_pred HHhCCCCCCceeHHHHHHHHHhCc
Q 008641 508 RLFDSDGDGRVSRDDFICCLRKNP 531 (558)
Q Consensus 508 ~~~D~d~dG~Is~~eF~~~l~~~~ 531 (558)
+.||.|+||+|+..|+..+++...
T Consensus 99 ~~fD~d~dG~Is~~eL~~vl~~lg 122 (160)
T COG5126 99 KLFDKDHDGYISIGELRRVLKSLG 122 (160)
T ss_pred HHhCCCCCceecHHHHHHHHHhhc
Confidence 999999999999999999998653
No 57
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=99.12 E-value=1.6e-10 Score=92.51 Aligned_cols=67 Identities=10% Similarity=0.173 Sum_probs=62.1
Q ss_pred hHHHHHHhhhhCC-CCCCcccHHHHHHHHHH-hCCCCcH-HHHHHHHHHhCCCCCCceeHHHHHHHHHhC
Q 008641 464 WQACELAFAECDP-DGNGFISENQLEVTIRP-AIPDLNK-YEIDSLFRLFDSDGDGRVSRDDFICCLRKN 530 (558)
Q Consensus 464 ~~~~~~~F~~~D~-d~~G~Is~~E~~~~l~~-~~~~~~~-~~i~~lf~~~D~d~dG~Is~~eF~~~l~~~ 530 (558)
-..+..+|+.||. +++|+|+.+||+.+++. +|..+++ ++++++++.+|.|+||.|+|+||+.++...
T Consensus 7 i~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l 76 (89)
T cd05022 7 IETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGEL 76 (89)
T ss_pred HHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 3568899999999 99999999999999999 8877888 999999999999999999999999998875
No 58
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=99.12 E-value=2.2e-10 Score=87.22 Aligned_cols=62 Identities=39% Similarity=0.702 Sum_probs=54.1
Q ss_pred HHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCcH----HHHHHHHHHhCCCCCCceeHHHHHHHH
Q 008641 466 ACELAFAECDPDGNGFISENQLEVTIRPAIPDLNK----YEIDSLFRLFDSDGDGRVSRDDFICCL 527 (558)
Q Consensus 466 ~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~----~~i~~lf~~~D~d~dG~Is~~eF~~~l 527 (558)
+++.+|+.+|.|++|+|+.+||..+++..+...++ +.++.+|+.+|.|+||.|+++||+.++
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 36889999999999999999999999999865544 455666999999999999999999875
No 59
>PTZ00183 centrin; Provisional
Probab=99.08 E-value=1.3e-09 Score=98.52 Aligned_cols=101 Identities=24% Similarity=0.247 Sum_probs=87.7
Q ss_pred HHHHHHhhhcCCCCCceeHHHHHHHHHhhccCcchhHHHHHHhhhhCCCCCCcccHHHHHHHHHHh-CCCCcHHHHHHHH
Q 008641 429 LSDEIFGFIDVDKNGSITFKQFLYASAHVMKLPLFWQACELAFAECDPDGNGFISENQLEVTIRPA-IPDLNKYEIDSLF 507 (558)
Q Consensus 429 ~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~-~~~~~~~~i~~lf 507 (558)
+++.+|..+|.+++|.|+++||..++...... .....+..+|+.+|.+++|.|+++||..++... .....+++++.+|
T Consensus 18 ~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~-~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F 96 (158)
T PTZ00183 18 EIREAFDLFDTDGSGTIDPKELKVAMRSLGFE-PKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDPREEILKAF 96 (158)
T ss_pred HHHHHHHHhCCCCCCcccHHHHHHHHHHhCCC-CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 67889999999999999999999998766432 336789999999999999999999999987764 3455678899999
Q ss_pred HHhCCCCCCceeHHHHHHHHHhC
Q 008641 508 RLFDSDGDGRVSRDDFICCLRKN 530 (558)
Q Consensus 508 ~~~D~d~dG~Is~~eF~~~l~~~ 530 (558)
+.+|.|++|.|+.+||..++...
T Consensus 97 ~~~D~~~~G~i~~~e~~~~l~~~ 119 (158)
T PTZ00183 97 RLFDDDKTGKISLKNLKRVAKEL 119 (158)
T ss_pred HHhCCCCCCcCcHHHHHHHHHHh
Confidence 99999999999999999998753
No 60
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.05 E-value=2.6e-09 Score=96.97 Aligned_cols=124 Identities=19% Similarity=0.189 Sum_probs=103.3
Q ss_pred HHHHHHHHHhhCCCCCCcccHHHHHHHhccCCcHHHHHHHhhhcCCCCCceeHHHHHHHHHhhccCcchhHHHHHHhhhh
Q 008641 395 AVNFLEKFLSMNPDPSGCVKLLDFLSVLRLKTCPLSDEIFGFIDVDKNGSITFKQFLYASAHVMKLPLFWQACELAFAEC 474 (558)
Q Consensus 395 ~~~~~~~F~~~D~d~~G~Is~~ef~~~l~~~~~~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~~~~~~~~~F~~~ 474 (558)
.+.++.+-..||.+++|+|..+||..+.+... .++.+|+.+|.|++|+|+..|+..++..+.... ..+-...+++.|
T Consensus 93 ~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~i~--~Wr~vF~~~D~D~SG~I~~sEL~~Al~~~Gy~L-spq~~~~lv~ky 169 (221)
T KOG0037|consen 93 IETCRLMISMFDRDNSGTIGFKEFKALWKYIN--QWRNVFRTYDRDRSGTIDSSELRQALTQLGYRL-SPQFYNLLVRKY 169 (221)
T ss_pred HHHHHHHHHHhcCCCCCccCHHHHHHHHHHHH--HHHHHHHhcccCCCCcccHHHHHHHHHHcCcCC-CHHHHHHHHHHh
Confidence 44556667788999999999999987765332 479999999999999999999999998766544 378889999999
Q ss_pred CCCCCCcccHHHHHHHHHHhCCCCcHHHHHHHHHHhCCCCCCc--eeHHHHHHHH
Q 008641 475 DPDGNGFISENQLEVTIRPAIPDLNKYEIDSLFRLFDSDGDGR--VSRDDFICCL 527 (558)
Q Consensus 475 D~d~~G~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D~d~dG~--Is~~eF~~~l 527 (558)
|..++|.|.+++|.+.+..+ ..+-++|++.|++.+|. |+|++|+.+.
T Consensus 170 d~~~~g~i~FD~FI~ccv~L------~~lt~~Fr~~D~~q~G~i~~~y~dfl~~t 218 (221)
T KOG0037|consen 170 DRFGGGRIDFDDFIQCCVVL------QRLTEAFRRRDTAQQGSITISYDDFLQMT 218 (221)
T ss_pred ccccCCceeHHHHHHHHHHH------HHHHHHHHHhccccceeEEEeHHHHHHHh
Confidence 98889999999999998765 35677899999999886 6899998764
No 61
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.05 E-value=1.1e-09 Score=105.12 Aligned_cols=138 Identities=19% Similarity=0.282 Sum_probs=108.2
Q ss_pred HHHHHHHHHHhhCCCCCCcccHHHHHHHhccCC----cHHHHHHHhhhcCCCCCceeHHHHHHHHHhhcc-------Ccc
Q 008641 394 EAVNFLEKFLSMNPDPSGCVKLLDFLSVLRLKT----CPLSDEIFGFIDVDKNGSITFKQFLYASAHVMK-------LPL 462 (558)
Q Consensus 394 ~~~~~~~~F~~~D~d~~G~Is~~ef~~~l~~~~----~~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~-------~~~ 462 (558)
...++..++.++|.+++|.|+..|+...+.... ..+..+-+..+|.|++|.|+|+|+...+..... ...
T Consensus 75 ~~~rl~~l~~~iD~~~Dgfv~~~El~~wi~~s~k~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~~~~~~~~d~e~ 154 (325)
T KOG4223|consen 75 SQERLGKLVPKIDSDSDGFVTESELKAWIMQSQKKYVVEEAARRWDEYDKNKDGFITWEEYLPQTYGRVDLPDEFPDEED 154 (325)
T ss_pred hHHHHHHHHhhhcCCCCCceeHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccceeeHHHhhhhhhhcccCccccccchh
Confidence 566788999999999999999999977764332 236778889999999999999999987764321 000
Q ss_pred h------hHHHHHHhhhhCCCCCCcccHHHHHHHHHHhC-CCCcHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCc
Q 008641 463 F------WQACELAFAECDPDGNGFISENQLEVTIRPAI-PDLNKYEIDSLFRLFDSDGDGRVSRDDFICCLRKNP 531 (558)
Q Consensus 463 ~------~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~-~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~~~~ 531 (558)
. -..-+.-|+..|.|++|.++.+||..+|..-- ..+.+--+.+-+...|+|+||+|+++||+.-|-...
T Consensus 155 ~~~~~km~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~ 230 (325)
T KOG4223|consen 155 NEEYKKMIARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHE 230 (325)
T ss_pred cHHHHHHHHHHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhcc
Confidence 0 11335679999999999999999999986532 345566688889999999999999999998776543
No 62
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.04 E-value=1.8e-09 Score=98.65 Aligned_cols=115 Identities=16% Similarity=0.222 Sum_probs=88.3
Q ss_pred HHHHhhccccccChHHHHHHHHHHHhhCCCCCCcccHHHHHHHhccC----CcHHHHHHHhhhcCCCCCceeHHHHHHHH
Q 008641 379 VEMARVGSIFHISSLEAVNFLEKFLSMNPDPSGCVKLLDFLSVLRLK----TCPLSDEIFGFIDVDKNGSITFKQFLYAS 454 (558)
Q Consensus 379 ~e~~~~~~~~~lt~~~~~~~~~~F~~~D~d~~G~Is~~ef~~~l~~~----~~~~~~~lf~~~D~d~~g~Is~~Ef~~~~ 454 (558)
.++..+-...-...+.......+|..+|.|++|+|+..||..+|... ..+-+.-.|+.+|.|++|.|+++|++.++
T Consensus 47 ~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rGt~eekl~w~F~lyD~dgdG~It~~Eml~iv 126 (193)
T KOG0044|consen 47 EEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEFICALSLTSRGTLEEKLKWAFRLYDLDGDGYITKEEMLKIV 126 (193)
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCCcHHHHhhhhheeecCCCCceEcHHHHHHHH
Confidence 33444434433344556667889999999999999999997777432 22356677999999999999999999887
Q ss_pred HhhccC----------cchhHHHHHHhhhhCCCCCCcccHHHHHHHHHH
Q 008641 455 AHVMKL----------PLFWQACELAFAECDPDGNGFISENQLEVTIRP 493 (558)
Q Consensus 455 ~~~~~~----------~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~ 493 (558)
..+... ...++.+..+|+.+|.|+||.|+.+||...++.
T Consensus 127 ~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~ 175 (193)
T KOG0044|consen 127 QAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCKA 175 (193)
T ss_pred HHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhhh
Confidence 654321 223678899999999999999999999998754
No 63
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=99.03 E-value=2.1e-09 Score=92.40 Aligned_cols=103 Identities=23% Similarity=0.272 Sum_probs=92.0
Q ss_pred HHHHHHhhhcCCCCCceeHHHHHHHHHhhccCcchhHHHHHHhhhhCCCCCCcccHHHHHHHHHH-hCCCCcHHHHHHHH
Q 008641 429 LSDEIFGFIDVDKNGSITFKQFLYASAHVMKLPLFWQACELAFAECDPDGNGFISENQLEVTIRP-AIPDLNKYEIDSLF 507 (558)
Q Consensus 429 ~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~-~~~~~~~~~i~~lf 507 (558)
+++..|..||.+++|+|+++|+..++..+..... .+++..+..-+|+++.|.|++++|+.++.. ++..-+.+++..+|
T Consensus 34 ~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~-k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~dt~eEi~~af 112 (172)
T KOG0028|consen 34 EIKEAFELFDPDMAGKIDVEELKVAMRALGFEPK-KEEILKLLADVDKEGSGKITFEDFRRVMTVKLGERDTKEEIKKAF 112 (172)
T ss_pred hHHHHHHhhccCCCCcccHHHHHHHHHHcCCCcc-hHHHHHHHHhhhhccCceechHHHHHHHHHHHhccCcHHHHHHHH
Confidence 6789999999999999999999888877766554 788899999999999999999999998654 46666999999999
Q ss_pred HHhCCCCCCceeHHHHHHHHHhCcc
Q 008641 508 RLFDSDGDGRVSRDDFICCLRKNPL 532 (558)
Q Consensus 508 ~~~D~d~dG~Is~~eF~~~l~~~~~ 532 (558)
+.+|.|++|+|+..+|..++++..+
T Consensus 113 rl~D~D~~Gkis~~~lkrvakeLge 137 (172)
T KOG0028|consen 113 RLFDDDKTGKISQRNLKRVAKELGE 137 (172)
T ss_pred HcccccCCCCcCHHHHHHHHHHhCc
Confidence 9999999999999999999998754
No 64
>PTZ00184 calmodulin; Provisional
Probab=99.02 E-value=3.2e-09 Score=94.81 Aligned_cols=100 Identities=25% Similarity=0.344 Sum_probs=86.4
Q ss_pred HHHHHHhhhcCCCCCceeHHHHHHHHHhhccCcchhHHHHHHhhhhCCCCCCcccHHHHHHHHHHhC-CCCcHHHHHHHH
Q 008641 429 LSDEIFGFIDVDKNGSITFKQFLYASAHVMKLPLFWQACELAFAECDPDGNGFISENQLEVTIRPAI-PDLNKYEIDSLF 507 (558)
Q Consensus 429 ~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~-~~~~~~~i~~lf 507 (558)
.+...|..+|.+++|.|+++||..++....... ..+.+..+|+.+|.+++|.|+++||..++.... ....++.+..+|
T Consensus 12 ~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~F 90 (149)
T PTZ00184 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDTDSEEEIKEAF 90 (149)
T ss_pred HHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCC-CHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 567899999999999999999999887654433 367899999999999999999999999987653 234567899999
Q ss_pred HHhCCCCCCceeHHHHHHHHHh
Q 008641 508 RLFDSDGDGRVSRDDFICCLRK 529 (558)
Q Consensus 508 ~~~D~d~dG~Is~~eF~~~l~~ 529 (558)
+.+|.|++|.|+.+||..++..
T Consensus 91 ~~~D~~~~g~i~~~e~~~~l~~ 112 (149)
T PTZ00184 91 KVFDRDGNGFISAAELRHVMTN 112 (149)
T ss_pred HhhCCCCCCeEeHHHHHHHHHH
Confidence 9999999999999999998865
No 65
>PLN02964 phosphatidylserine decarboxylase
Probab=99.00 E-value=1.3e-09 Score=116.98 Aligned_cols=100 Identities=18% Similarity=0.149 Sum_probs=83.8
Q ss_pred HHHHHHHhhhcCCCCCceeHHHHHHHHHhhccCcchhH---HHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCcHHHHH
Q 008641 428 PLSDEIFGFIDVDKNGSITFKQFLYASAHVMKLPLFWQ---ACELAFAECDPDGNGFISENQLEVTIRPAIPDLNKYEID 504 (558)
Q Consensus 428 ~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~~~~---~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~i~ 504 (558)
+++.+.|+.+|.|++|.+ +..++..+.....+++ .++.+|+.+|.|++|.|+++||..++..++...+++++.
T Consensus 143 ~elkeaF~lfD~dgdG~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg~~~seEEL~ 218 (644)
T PLN02964 143 ESACESFDLLDPSSSNKV----VGSIFVSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFGNLVAANKKE 218 (644)
T ss_pred HHHHHHHHHHCCCCCCcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhccCCCHHHHH
Confidence 467889999999999997 4444444442122233 389999999999999999999999999988888999999
Q ss_pred HHHHHhCCCCCCceeHHHHHHHHHhCc
Q 008641 505 SLFRLFDSDGDGRVSRDDFICCLRKNP 531 (558)
Q Consensus 505 ~lf~~~D~d~dG~Is~~eF~~~l~~~~ 531 (558)
++|+.+|.|+||.|+++||.+++...+
T Consensus 219 eaFk~fDkDgdG~Is~dEL~~vL~~~~ 245 (644)
T PLN02964 219 ELFKAADLNGDGVVTIDELAALLALQQ 245 (644)
T ss_pred HHHHHhCCCCCCcCCHHHHHHHHHhcc
Confidence 999999999999999999999998853
No 66
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.98 E-value=2e-09 Score=86.45 Aligned_cols=66 Identities=20% Similarity=0.287 Sum_probs=60.6
Q ss_pred HHHHHHhhhhC-CCCCC-cccHHHHHHHHHH-----hCCCCcHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC
Q 008641 465 QACELAFAECD-PDGNG-FISENQLEVTIRP-----AIPDLNKYEIDSLFRLFDSDGDGRVSRDDFICCLRKN 530 (558)
Q Consensus 465 ~~~~~~F~~~D-~d~~G-~Is~~E~~~~l~~-----~~~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~~~ 530 (558)
..++.+|+.|| +|++| .|+.+||+.+|+. .|...++++++++++.+|.|+||.|+|+||+.++...
T Consensus 8 ~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~ 80 (88)
T cd05027 8 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMV 80 (88)
T ss_pred HHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 56889999998 79999 5999999999999 8888899999999999999999999999999887653
No 67
>COG2937 PlsB Glycerol-3-phosphate O-acyltransferase [Lipid metabolism]
Probab=98.92 E-value=3.1e-09 Score=111.31 Aligned_cols=180 Identities=19% Similarity=0.184 Sum_probs=122.7
Q ss_pred CCCCCCEEEeCCCCchhHHHHhhhcc-----c-ceeeccccCCCCHHHHHHHhcceEEEecCCccch--HHHHHH-HHHH
Q 008641 172 PRQIAPIVVSNHISYIEPIFFFYELF-----P-TIVASESHDSIPFVGTIIRAMQVIYVDRFSQSSR--KNAVSE-IKRK 242 (558)
Q Consensus 172 ~~~~~~iivsNH~S~~D~~~l~~~~~-----p-~~v~k~~l~~~p~~g~~~~~~g~i~v~r~~~~~~--~~~~~~-~~~~ 242 (558)
.+....|+|.-|.|++|.+++.+++. | .+.+... .+.|.+|.+++..|.+||.|+-+... ..++++ +.+.
T Consensus 293 ~~gheiVyvpcHRShiDylLLsy~ly~ngLvPpHiaAGIN-LNf~p~G~i~RR~GAfFIRRsfKgn~LYs~VfrEYl~~L 371 (810)
T COG2937 293 LDGHEIVYVPCHRSHIDYLLLSYVLYHNGLVPPHIAAGIN-LNFWPMGPIFRRGGAFFIRRTFKGNPLYSTVFREYLGEL 371 (810)
T ss_pred hcCCceEEEecchhhhhHHHHHHHHHhcCCCcchhhcccc-ccCccchHHHHhccceEEEeccCCChhHHHHHHHHHHHH
Confidence 34557789999999999999888753 3 4444444 45677999999999999999765432 334444 4445
Q ss_pred HhcCCCCeEEEeeCceecCCCcccccccc-------ccc----CCCceeEEEEEccCCCCCCCC---------CCccHHH
Q 008641 243 ASCDRFPRVLLFPEGTTTNGKFLISFQLG-------AFI----PAYPIQPVIVRYPHVHFDQSW---------GDVSLGK 302 (558)
Q Consensus 243 l~~~~~~~l~iFPEGt~s~~~~ll~Fk~G-------af~----~~~pI~Pv~i~y~~~~~~~~w---------~~~~~~~ 302 (558)
+.+|- ++=-|-||+||..+.+++.|.| |+- ..+-+|||.|.|.+.+-...+ .+.+.+.
T Consensus 372 f~rgy--sleyfIEGGRSRTGrlL~PKtGmlsmtlqA~Lrg~~rpI~lvPvyIgYe~v~Ev~tYa~ElrGa~K~kE~~~~ 449 (810)
T COG2937 372 FSRGY--SLEYFIEGGRSRTGRLLPPKTGMLSMTLQAMLRGRTRPILLVPVYIGYEHVHEVGTYAKELRGATKEKESLRW 449 (810)
T ss_pred HhCCc--ceEEEeecCccccCCcCCCccchHHHHHHHHhcCCCCCeEEEeeEeehhhHhhHHHHHHHhcCCcCCcccHHH
Confidence 55565 9999999999999999999999 332 345689999999884432222 1223332
Q ss_pred HHHHHhc---cc-cceEEEEEecccCCCcc---------cc-----------cCHHHHHHHHHHHHHHhcCCcccCC
Q 008641 303 LMFRMFT---QF-HNFMEVEYLPVVFPSDN---------QK-----------ENALRFAERTSHAMASALNAVQTSH 355 (558)
Q Consensus 303 ~~~~~~~---~~-~~~~~v~~l~pi~~~~~---------~~-----------~~~~~~~~~v~~~i~~~l~~~~~~~ 355 (558)
. ++.+. .. .+.+.|.||+||...++ ++ ...+.++.+|...|.++..+-++..
T Consensus 450 l-~r~i~aqk~Rn~Gq~yVnFGEPi~L~qyL~~~~pew~~d~~~~~kp~w~~~tvn~ia~~V~~rIN~AaaVna~nL 525 (810)
T COG2937 450 L-LRVIKAQKLRNLGQGYVNFGEPIPLRQYLNQHVPEWRQDPIEEEKPAWLTPTVNKIAFDVMVRINNAAAVNAMNL 525 (810)
T ss_pred H-HHHHHHHhhhhcCcEEEeCCCCccHHHHhcccChhhhhCcccccCcccccHHHHHHHHHHHHHhhccccCCHHHH
Confidence 2 23332 22 67899999999985321 11 2345677788888877776655443
No 68
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=98.89 E-value=1.2e-08 Score=100.87 Aligned_cols=133 Identities=20% Similarity=0.266 Sum_probs=99.4
Q ss_pred HHHHHHHHHhhCCCCCCcccHHHHHHHh----ccCCcH-HHHHHHhhhcCCCCCceeHHHHHHHHHhhccCc--------
Q 008641 395 AVNFLEKFLSMNPDPSGCVKLLDFLSVL----RLKTCP-LSDEIFGFIDVDKNGSITFKQFLYASAHVMKLP-------- 461 (558)
Q Consensus 395 ~~~~~~~F~~~D~d~~G~Is~~ef~~~l----~~~~~~-~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~-------- 461 (558)
..++...|+.+|.+++|+|+..+....+ |+...- .+.. +....+.||.+.|.+....+..-....
T Consensus 463 ~sdL~~eF~~~D~~ksG~lsis~Wa~~mE~i~~L~LPWr~L~~--kla~~s~d~~v~Y~~~~~~l~~e~~~~ea~~slve 540 (631)
T KOG0377|consen 463 RSDLEDEFRKYDPKKSGKLSISHWAKCMENITGLNLPWRLLRP--KLANGSDDGKVEYKSTLDNLDTEVILEEAGSSLVE 540 (631)
T ss_pred hhHHHHHHHhcChhhcCeeeHHHHHHHHHHHhcCCCcHHHhhh--hccCCCcCcceehHhHHHHhhhhhHHHHHHhHHHH
Confidence 4568889999999999999999986554 444332 1111 223345667888887765543211100
Q ss_pred ---chhHHHHHHhhhhCCCCCCcccHHHHHHHHHHhC----CCCcHHHHHHHHHHhCCCCCCceeHHHHHHHHHh
Q 008641 462 ---LFWQACELAFAECDPDGNGFISENQLEVTIRPAI----PDLNKYEIDSLFRLFDSDGDGRVSRDDFICCLRK 529 (558)
Q Consensus 462 ---~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~----~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~~ 529 (558)
.....++.+|+.+|.|++|.|+.+||+++++-++ ..++++++.++-+.+|.|+||.|+++||+++++-
T Consensus 541 tLYr~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFrl 615 (631)
T KOG0377|consen 541 TLYRNKSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAFRL 615 (631)
T ss_pred HHHhchhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHhh
Confidence 0134678999999999999999999999987653 4788999999999999999999999999987753
No 69
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.87 E-value=7.7e-09 Score=82.99 Aligned_cols=66 Identities=20% Similarity=0.269 Sum_probs=59.3
Q ss_pred HHHHHHhhhhCC-CC-CCcccHHHHHHHHHH---hCCCCcHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC
Q 008641 465 QACELAFAECDP-DG-NGFISENQLEVTIRP---AIPDLNKYEIDSLFRLFDSDGDGRVSRDDFICCLRKN 530 (558)
Q Consensus 465 ~~~~~~F~~~D~-d~-~G~Is~~E~~~~l~~---~~~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~~~ 530 (558)
..+-.+|..||. |+ +|+|+.+||+++++. +|...++++++++++.+|.|+||.|+|+||+.++.+.
T Consensus 10 ~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l 80 (88)
T cd05029 10 GLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGAL 80 (88)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence 456789999997 66 899999999999974 6888999999999999999999999999999988764
No 70
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.84 E-value=1.1e-08 Score=83.24 Aligned_cols=66 Identities=15% Similarity=0.273 Sum_probs=57.3
Q ss_pred HHHHHHhhhhC-CCCCC-cccHHHHHHHHHHh-----CCCCcHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC
Q 008641 465 QACELAFAECD-PDGNG-FISENQLEVTIRPA-----IPDLNKYEIDSLFRLFDSDGDGRVSRDDFICCLRKN 530 (558)
Q Consensus 465 ~~~~~~F~~~D-~d~~G-~Is~~E~~~~l~~~-----~~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~~~ 530 (558)
..+..+|..|| +|++| +|+.+||+.+++.. ....++++++++++.+|.|+||.|+|+||+.++...
T Consensus 10 ~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l 82 (93)
T cd05026 10 DTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (93)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 45788899999 78998 59999999999773 234478899999999999999999999999998775
No 71
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.82 E-value=1.4e-08 Score=83.13 Aligned_cols=69 Identities=17% Similarity=0.357 Sum_probs=61.0
Q ss_pred hHHHHHHhhhhCC-CC-CCcccHHHHHHHHHH-----hCCCCcHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCcc
Q 008641 464 WQACELAFAECDP-DG-NGFISENQLEVTIRP-----AIPDLNKYEIDSLFRLFDSDGDGRVSRDDFICCLRKNPL 532 (558)
Q Consensus 464 ~~~~~~~F~~~D~-d~-~G~Is~~E~~~~l~~-----~~~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~~~~~ 532 (558)
...+..+|..||. |+ +|.|+.+||+.+++. +|...++++++.+++.+|.|++|.|+|+||+.++....-
T Consensus 7 ~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~~~ 82 (94)
T cd05031 7 MESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGLSI 82 (94)
T ss_pred HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHH
Confidence 4568899999997 87 699999999999986 456789999999999999999999999999999886543
No 72
>KOG3729 consensus Mitochondrial glycerol-3-phosphate acyltransferase GPAT [Lipid transport and metabolism]
Probab=98.81 E-value=1.9e-08 Score=101.68 Aligned_cols=152 Identities=19% Similarity=0.232 Sum_probs=114.7
Q ss_pred CCCCEEEeCCCCchhHHHHhhhccc-----ceeeccccCCCCHHHHHHHhcceEEEecCC---ccchHH------HHHHH
Q 008641 174 QIAPIVVSNHISYIEPIFFFYELFP-----TIVASESHDSIPFVGTIIRAMQVIYVDRFS---QSSRKN------AVSEI 239 (558)
Q Consensus 174 ~~~~iivsNH~S~~D~~~l~~~~~p-----~~v~k~~l~~~p~~g~~~~~~g~i~v~r~~---~~~~~~------~~~~~ 239 (558)
.-|.|++.=|.|.+|.+++.+.+.. -+++......+|++||+++.+|.++|.|.- +...++ .---+
T Consensus 157 g~PliFlPlHRSHlDYlliTwIL~~~~Ik~P~iAsGNNLnIP~Fg~Llr~LGaFFIrRriDp~~~G~KDVLYRA~LH~yi 236 (715)
T KOG3729|consen 157 GIPMVFLPLHRSHLDYLLITWILWHFGIKLPHIASGNNLNIPGFGWLLRALGAFFIRRRVDPDDEGGKDVLYRAILHSYI 236 (715)
T ss_pred CCceEEEecchhhhhHHHHHHHHHhcCcCCceeccCCccccchHHHHHHhcchheeeeccCCCcccchhHHHHHHHHHHH
Confidence 4577999999999999888877653 357777788999999999999999998832 112233 23356
Q ss_pred HHHHhcCCCCeEEEeeCceecCCCccccccccc-------cc----CCCceeEEEEEccCCCCCCCC----C----Cc--
Q 008641 240 KRKASCDRFPRVLLFPEGTTTNGKFLISFQLGA-------FI----PAYPIQPVIVRYPHVHFDQSW----G----DV-- 298 (558)
Q Consensus 240 ~~~l~~~~~~~l~iFPEGt~s~~~~ll~Fk~Ga-------f~----~~~pI~Pv~i~y~~~~~~~~w----~----~~-- 298 (558)
.+.++++. ++=+|-|||||+.+.-.-.|.|. +. +++=++||.+.|.+-.-..+. | +.
T Consensus 237 ~~~L~Q~~--~iEfFlEGtRsR~GK~~~pk~GlLSVvV~a~~~g~IPD~LlvPVs~~YdRiveG~f~~EQ~G~pK~~ES~ 314 (715)
T KOG3729|consen 237 EQVLSQDM--PIEFFLEGTRSRFGKALTPKNGLLSVVVEAVQHGFIPDCLLVPVSYTYDRVVEGIFLHEQMGIPKVRESV 314 (715)
T ss_pred HHHHhCCC--ceEEEEeccccccCCcCCcccccHHHHHHHHhcCCCCceEEEeeeccHHHHhhhhhhHHhcCCCCccHHH
Confidence 67788887 99999999999888888888883 32 677799999999873211111 1 11
Q ss_pred -cHHHHHHHHhccccceEEEEEecccCCCc
Q 008641 299 -SLGKLMFRMFTQFHNFMEVEYLPVVFPSD 327 (558)
Q Consensus 299 -~~~~~~~~~~~~~~~~~~v~~l~pi~~~~ 327 (558)
+...-+|++++.-++.++|.|++|++..+
T Consensus 315 ~~v~rGi~~~L~kNYG~vR~DF~~P~Sl~E 344 (715)
T KOG3729|consen 315 LGVFRGIFSGLSKNYGVVRMDFGRPISLTE 344 (715)
T ss_pred HHHHHHHHHHHhhcCCeEEEecCCCccHHH
Confidence 34466788888889999999999998743
No 73
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.81 E-value=1.6e-08 Score=73.52 Aligned_cols=52 Identities=35% Similarity=0.618 Sum_probs=48.6
Q ss_pred CCCcccHHHHHHHHHHhCCC-CcHHHHHHHHHHhCCCCCCceeHHHHHHHHHh
Q 008641 478 GNGFISENQLEVTIRPAIPD-LNKYEIDSLFRLFDSDGDGRVSRDDFICCLRK 529 (558)
Q Consensus 478 ~~G~Is~~E~~~~l~~~~~~-~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~~ 529 (558)
.+|.|+.+||+.++..+|.. +++++++.+|..+|.|++|.|+|+||+.++.+
T Consensus 1 ~~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 1 KDGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SSSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence 37999999999999888988 99999999999999999999999999998864
No 74
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.80 E-value=2.1e-08 Score=81.76 Aligned_cols=67 Identities=16% Similarity=0.323 Sum_probs=59.4
Q ss_pred hHHHHHHhhhhC-CCCCC-cccHHHHHHHHHH-hCC----CCcHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC
Q 008641 464 WQACELAFAECD-PDGNG-FISENQLEVTIRP-AIP----DLNKYEIDSLFRLFDSDGDGRVSRDDFICCLRKN 530 (558)
Q Consensus 464 ~~~~~~~F~~~D-~d~~G-~Is~~E~~~~l~~-~~~----~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~~~ 530 (558)
.+.++.+|+.|| .|++| .|+.+||+.+++. +|. ..++++++++|+.+|.|++|.|+|+||+.++...
T Consensus 8 ~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~ 81 (92)
T cd05025 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL 81 (92)
T ss_pred HHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 567899999997 99999 5999999999986 443 4588999999999999999999999999988864
No 75
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.74 E-value=2.7e-08 Score=75.73 Aligned_cols=61 Identities=25% Similarity=0.508 Sum_probs=55.7
Q ss_pred HHHhhhhCCCCCCcccHHHHHHHHHHhCCCCcHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC
Q 008641 468 ELAFAECDPDGNGFISENQLEVTIRPAIPDLNKYEIDSLFRLFDSDGDGRVSRDDFICCLRKN 530 (558)
Q Consensus 468 ~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~~~ 530 (558)
+.+|+.+|.|++|.|+.+|++.++...| .++++++.+|+.+|.+++|.|+++||+.++...
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g--~~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~ 62 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSG--LPRSVLAQIWDLADTDKDGKLDKEEFAIAMHLI 62 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 5689999999999999999999999876 588999999999999999999999999887654
No 76
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=98.72 E-value=4.2e-08 Score=97.41 Aligned_cols=130 Identities=16% Similarity=0.285 Sum_probs=102.8
Q ss_pred HHHHHHHHHhhCCCCCCcccHHHHHHHh-cc---CCc---HHHHHHHhhhcCCCCCceeHHHHHHHHHhhccCcchhHHH
Q 008641 395 AVNFLEKFLSMNPDPSGCVKLLDFLSVL-RL---KTC---PLSDEIFGFIDVDKNGSITFKQFLYASAHVMKLPLFWQAC 467 (558)
Q Consensus 395 ~~~~~~~F~~~D~d~~G~Is~~ef~~~l-~~---~~~---~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~~~~~~ 467 (558)
.+-++-.|..+|+..+|.|+..+|+.++ .. +.. ..++++-+.++.+ +..||++||+.+...+.. -+.+
T Consensus 317 ~Eil~lEF~~~~~~~~g~Ise~DFA~~lL~~a~~n~~~k~~~lkrvk~kf~~~-~~gISl~Ef~~Ff~Fl~~----l~df 391 (489)
T KOG2643|consen 317 EEILELEFERFDKGDSGAISEVDFAELLLAYAGVNSKKKHKYLKRVKEKFKDD-GKGISLQEFKAFFRFLNN----LNDF 391 (489)
T ss_pred HHHHHHHHHHhCcccccccCHHHHHHHHHHHcccchHhHHHHHHHHHHhccCC-CCCcCHHHHHHHHHHHhh----hhHH
Confidence 4446668999999999999999998776 22 211 1567777888777 455999999999877655 3445
Q ss_pred HHHhhhhCCCCCCcccHHHHHHHHHHh-CCCCcHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC
Q 008641 468 ELAFAECDPDGNGFISENQLEVTIRPA-IPDLNKYEIDSLFRLFDSDGDGRVSRDDFICCLRKN 530 (558)
Q Consensus 468 ~~~F~~~D~d~~G~Is~~E~~~~l~~~-~~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~~~ 530 (558)
..+...|-.- .+.|+..+|+++.... |.++++..++.+|..||.|+||.++++||+.+|++.
T Consensus 392 d~Al~fy~~A-g~~i~~~~f~raa~~vtGveLSdhVvdvvF~IFD~N~Dg~LS~~EFl~Vmk~R 454 (489)
T KOG2643|consen 392 DIALRFYHMA-GASIDEKTFQRAAKVVTGVELSDHVVDVVFTIFDENNDGTLSHKEFLAVMKRR 454 (489)
T ss_pred HHHHHHHHHc-CCCCCHHHHHHHHHHhcCcccccceeeeEEEEEccCCCCcccHHHHHHHHHHH
Confidence 6666666543 4789999999988764 789999999999999999999999999999999863
No 77
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.71 E-value=5.3e-08 Score=80.01 Aligned_cols=65 Identities=20% Similarity=0.313 Sum_probs=59.3
Q ss_pred hHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCcHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC
Q 008641 464 WQACELAFAECDPDGNGFISENQLEVTIRPAIPDLNKYEIDSLFRLFDSDGDGRVSRDDFICCLRKN 530 (558)
Q Consensus 464 ~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~~~ 530 (558)
.+.++.+|+.+|.|++|.|+.+|++.+++..+ +++++++++++.+|.+++|.|+++||+.++...
T Consensus 9 ~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~--~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~ 73 (96)
T smart00027 9 KAKYEQIFRSLDKNQDGTVTGAQAKPILLKSG--LPQTLLAKIWNLADIDNDGELDKDEFALAMHLI 73 (96)
T ss_pred HHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 46789999999999999999999999999864 789999999999999999999999999887653
No 78
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.70 E-value=6.1e-08 Score=77.93 Aligned_cols=67 Identities=13% Similarity=0.290 Sum_probs=57.8
Q ss_pred hHHHHHHhhh-hCCCCCC-cccHHHHHHHHHHhC-----CCCcHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC
Q 008641 464 WQACELAFAE-CDPDGNG-FISENQLEVTIRPAI-----PDLNKYEIDSLFRLFDSDGDGRVSRDDFICCLRKN 530 (558)
Q Consensus 464 ~~~~~~~F~~-~D~d~~G-~Is~~E~~~~l~~~~-----~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~~~ 530 (558)
...+..+|+. +|+||+| +|+.+||+.++.... ...++.+++++++.+|.|+||.|+|+||+.++...
T Consensus 8 i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l 81 (89)
T cd05023 8 IESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGL 81 (89)
T ss_pred HHHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 3567899999 7788876 999999999998863 35678899999999999999999999999988764
No 79
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=98.68 E-value=5.8e-08 Score=73.76 Aligned_cols=56 Identities=27% Similarity=0.436 Sum_probs=29.2
Q ss_pred HHHHHHhhCCCCCCcccHHHHHHHhccCC----c----HHHHHHHhhhcCCCCCceeHHHHHHH
Q 008641 398 FLEKFLSMNPDPSGCVKLLDFLSVLRLKT----C----PLSDEIFGFIDVDKNGSITFKQFLYA 453 (558)
Q Consensus 398 ~~~~F~~~D~d~~G~Is~~ef~~~l~~~~----~----~~~~~lf~~~D~d~~g~Is~~Ef~~~ 453 (558)
++++|..+|.|++|+|+.+||..++.... . +.+..+|+.+|.|++|.|+++||+.+
T Consensus 2 l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~ 65 (66)
T PF13499_consen 2 LKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNF 65 (66)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHH
T ss_pred HHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhcc
Confidence 45566666666666666666655543211 1 13444455555555555555555543
No 80
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=98.67 E-value=7.8e-08 Score=87.94 Aligned_cols=96 Identities=19% Similarity=0.189 Sum_probs=79.1
Q ss_pred HHHHHhhCCCCCCc-ccHHHHHHHhccCCc----H-HHHHHHhhhcCCCCCceeHHHHHHHHHhhccCcch------hHH
Q 008641 399 LEKFLSMNPDPSGC-VKLLDFLSVLRLKTC----P-LSDEIFGFIDVDKNGSITFKQFLYASAHVMKLPLF------WQA 466 (558)
Q Consensus 399 ~~~F~~~D~d~~G~-Is~~ef~~~l~~~~~----~-~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~~------~~~ 466 (558)
.+++..+|.+++|. |+.++|.+.+..-.. + -++-.|+.||.+++|.|+.+|+..++..+...... ++-
T Consensus 69 ~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i 148 (187)
T KOG0034|consen 69 DRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKASKREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDI 148 (187)
T ss_pred HHHHHHHhccCCCCccCHHHHHHHHhhhcCCccHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHH
Confidence 46788888888888 999999988864322 2 46668999999999999999999999888764333 345
Q ss_pred HHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 008641 467 CELAFAECDPDGNGFISENQLEVTIRPA 494 (558)
Q Consensus 467 ~~~~F~~~D~d~~G~Is~~E~~~~l~~~ 494 (558)
+...|..+|.|+||.|+++||.+++...
T Consensus 149 ~d~t~~e~D~d~DG~IsfeEf~~~v~~~ 176 (187)
T KOG0034|consen 149 VDKTFEEADTDGDGKISFEEFCKVVEKQ 176 (187)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHcC
Confidence 6788999999999999999999998753
No 81
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.67 E-value=7.3e-08 Score=77.84 Aligned_cols=67 Identities=15% Similarity=0.228 Sum_probs=58.9
Q ss_pred hHHHHHHhhhhCC--CCCCcccHHHHHHHHHH-hCCC----CcHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC
Q 008641 464 WQACELAFAECDP--DGNGFISENQLEVTIRP-AIPD----LNKYEIDSLFRLFDSDGDGRVSRDDFICCLRKN 530 (558)
Q Consensus 464 ~~~~~~~F~~~D~--d~~G~Is~~E~~~~l~~-~~~~----~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~~~ 530 (558)
.+.++.+|..||. |++|.|+.+||..+++. .|.. .++++++.+++.+|.|++|.|+|+||+.++...
T Consensus 7 ~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~ 80 (88)
T cd00213 7 IETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKL 80 (88)
T ss_pred HHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHH
Confidence 4568899999999 89999999999999986 4533 358999999999999999999999999988764
No 82
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.65 E-value=9e-08 Score=71.08 Aligned_cols=61 Identities=33% Similarity=0.573 Sum_probs=57.1
Q ss_pred HHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCcHHHHHHHHHHhCCCCCCceeHHHHHHHH
Q 008641 467 CELAFAECDPDGNGFISENQLEVTIRPAIPDLNKYEIDSLFRLFDSDGDGRVSRDDFICCL 527 (558)
Q Consensus 467 ~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l 527 (558)
+..+|..+|.+++|.|+.+|+..+++..+...+.+.+..+|+.+|.+++|.|+++||..++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 5678999999999999999999999999989999999999999999999999999998765
No 83
>KOG3730 consensus Acyl-CoA:dihydroxyactetone-phosphate acyltransferase DHAPAT [Lipid transport and metabolism]
Probab=98.62 E-value=2.7e-07 Score=92.16 Aligned_cols=152 Identities=17% Similarity=0.184 Sum_probs=109.0
Q ss_pred CCCCCCEEEeCCCCchhHHHHhhhcc------cceeeccccCCCCHHHHHHHhcceEEEecCCccc---hHHHHHHHHHH
Q 008641 172 PRQIAPIVVSNHISYIEPIFFFYELF------PTIVASESHDSIPFVGTIIRAMQVIYVDRFSQSS---RKNAVSEIKRK 242 (558)
Q Consensus 172 ~~~~~~iivsNH~S~~D~~~l~~~~~------p~~v~k~~l~~~p~~g~~~~~~g~i~v~r~~~~~---~~~~~~~~~~~ 242 (558)
..+.|+|+...|.|++|.+.+.+.+. |.+.+..+...+.++|.+++..|..++.|+-..+ -.-..+-+...
T Consensus 147 ~~k~pV~~lPSHrsY~DFlllS~icy~YDi~iP~IAAGmDF~sMk~mg~~LR~sGAFFMRRsFg~d~LYWaVFsEYv~t~ 226 (685)
T KOG3730|consen 147 MGKCPVLYLPSHRSYMDFLLLSYICYYYDIEIPGIAAGMDFHSMKGMGTMLRKSGAFFMRRSFGNDELYWAVFSEYVYTL 226 (685)
T ss_pred hccCCEEEeccchhHHHHHHHHHHHHhccCCCchhhcccchHhhhHHHHHHHhcccceeeeccCCceehHHHHHHHHHHH
Confidence 35678999999999999776665542 4667777788888999999999999999965443 23344445556
Q ss_pred HhcCCCCeEEEeeCceecCCCcccccccccc--------c---CCCceeEEEEEccCCCC----------CC--CCCCcc
Q 008641 243 ASCDRFPRVLLFPEGTTTNGKFLISFQLGAF--------I---PAYPIQPVIVRYPHVHF----------DQ--SWGDVS 299 (558)
Q Consensus 243 l~~~~~~~l~iFPEGt~s~~~~ll~Fk~Gaf--------~---~~~pI~Pv~i~y~~~~~----------~~--~w~~~~ 299 (558)
+.++. ..|=.|-|||||+...-+-.|-|.. . .++-||||.+.|..-.- -| --...+
T Consensus 227 v~N~~-~~VEFFiEgTRSR~~K~L~PK~GlL~mvlePyf~geV~Dv~iVPVSv~YdkILEE~LyvYELLGvPKPKEST~g 305 (685)
T KOG3730|consen 227 VANYH-IGVEFFIEGTRSRNFKALVPKIGLLSMVLEPYFTGEVPDVMIVPVSVAYDKILEEQLYVYELLGVPKPKESTKG 305 (685)
T ss_pred HhcCC-CceEEEEeecccccccccCcchhhHHHHHhhhhcCCcCceEEEEeeecHHHHHHHHHHHHHHhCCCCcccchhH
Confidence 66665 6899999999998877777788832 2 45669999999987211 11 101223
Q ss_pred HHHHHHHHhccccceEEEEEecccCC
Q 008641 300 LGKLMFRMFTQFHNFMEVEYLPVVFP 325 (558)
Q Consensus 300 ~~~~~~~~~~~~~~~~~v~~l~pi~~ 325 (558)
++ ...+++.-.++.+-+.||+||+.
T Consensus 306 ll-KArkil~e~fGs~fl~FGePISv 330 (685)
T KOG3730|consen 306 LL-KARKILDERFGSMFLDFGEPISV 330 (685)
T ss_pred HH-HHHHHHHhhcCcEEEecCCCccH
Confidence 33 33456666789999999999986
No 84
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.59 E-value=1.5e-07 Score=79.40 Aligned_cols=62 Identities=27% Similarity=0.389 Sum_probs=54.5
Q ss_pred hHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCcHHHHHHHHHHhCCCCCCceeHHHHHHHHHh
Q 008641 464 WQACELAFAECDPDGNGFISENQLEVTIRPAIPDLNKYEIDSLFRLFDSDGDGRVSRDDFICCLRK 529 (558)
Q Consensus 464 ~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~~ 529 (558)
...+..+|..+|.|+||.|+.+|+..+. ....+..+..+|+.+|.|+||.||++||..++.+
T Consensus 47 ~~~l~w~F~~lD~d~DG~Ls~~EL~~~~----l~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl~~ 108 (116)
T cd00252 47 KDPVGWMFNQLDGNYDGKLSHHELAPIR----LDPNEHCIKPFFESCDLDKDGSISLDEWCYCFIK 108 (116)
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHH----ccchHHHHHHHHHHHCCCCCCCCCHHHHHHHHhC
Confidence 5678999999999999999999999876 2345778899999999999999999999999843
No 85
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=98.59 E-value=1.5e-07 Score=75.40 Aligned_cols=66 Identities=12% Similarity=0.186 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHhhCC-CCCCcccHHHHHHHhcc-C----Cc-HHHHHHHhhhcCCCCCceeHHHHHHHHHhhc
Q 008641 393 LEAVNFLEKFLSMNP-DPSGCVKLLDFLSVLRL-K----TC-PLSDEIFGFIDVDKNGSITFKQFLYASAHVM 458 (558)
Q Consensus 393 ~~~~~~~~~F~~~D~-d~~G~Is~~ef~~~l~~-~----~~-~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~ 458 (558)
..+..+.++|..||+ +++|+|+..||+.++.. - .. +++.++++.+|.|+||.|+|+||..++..+.
T Consensus 5 ~ai~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l~ 77 (89)
T cd05022 5 KAIETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGELA 77 (89)
T ss_pred HHHHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence 456788999999999 99999999999887743 1 12 5799999999999999999999998887654
No 86
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.59 E-value=1.6e-07 Score=77.13 Aligned_cols=70 Identities=20% Similarity=0.312 Sum_probs=58.8
Q ss_pred ccChHHHHHHHHHHHhhCCCCCCcccHHHHHHHhccC-C-cHHHHHHHhhhcCCCCCceeHHHHHHHHHhhc
Q 008641 389 HISSLEAVNFLEKFLSMNPDPSGCVKLLDFLSVLRLK-T-CPLSDEIFGFIDVDKNGSITFKQFLYASAHVM 458 (558)
Q Consensus 389 ~lt~~~~~~~~~~F~~~D~d~~G~Is~~ef~~~l~~~-~-~~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~ 458 (558)
.++.++...++++|..+|.|++|.|+.+|+..++... . .+++.++++.+|.+++|.|+|+||+.++....
T Consensus 3 ~ls~~~~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~~ 74 (96)
T smart00027 3 AISPEDKAKYEQIFRSLDKNQDGTVTGAQAKPILLKSGLPQTLLAKIWNLADIDNDGELDKDEFALAMHLIY 74 (96)
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHH
Confidence 3678899999999999999999999999998877432 2 24788999999999999999999998876543
No 87
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.52 E-value=2.8e-07 Score=75.05 Aligned_cols=66 Identities=15% Similarity=0.228 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHhhC-CCCCC-cccHHHHHHHhcc--------C-CcHHHHHHHhhhcCCCCCceeHHHHHHHHHhhc
Q 008641 393 LEAVNFLEKFLSMN-PDPSG-CVKLLDFLSVLRL--------K-TCPLSDEIFGFIDVDKNGSITFKQFLYASAHVM 458 (558)
Q Consensus 393 ~~~~~~~~~F~~~D-~d~~G-~Is~~ef~~~l~~--------~-~~~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~ 458 (558)
.-+..+.++|..|| +|++| +|+.+||+.+++. . ...++.++++.+|.|++|.|+|+||+.++..+.
T Consensus 7 ~a~~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l~ 83 (93)
T cd05026 7 GAMDTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAALT 83 (93)
T ss_pred HHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Confidence 34677889999998 78998 5999999888843 1 223799999999999999999999999887653
No 88
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=98.50 E-value=1.5e-06 Score=87.30 Aligned_cols=135 Identities=17% Similarity=0.191 Sum_probs=105.6
Q ss_pred cChHHHHHHHHHHHhhCCCCCCcccHHHHHHHhccCCcH-HHHHHHhh----hcCCCCCceeHHHHHHHHHhhccCcchh
Q 008641 390 ISSLEAVNFLEKFLSMNPDPSGCVKLLDFLSVLRLKTCP-LSDEIFGF----IDVDKNGSITFKQFLYASAHVMKLPLFW 464 (558)
Q Consensus 390 lt~~~~~~~~~~F~~~D~d~~G~Is~~ef~~~l~~~~~~-~~~~lf~~----~D~d~~g~Is~~Ef~~~~~~~~~~~~~~ 464 (558)
++.+....+.-.|..+|+|+||.|+.+++...-.-..+. .++++|+. +-.-.+|+++|++|+.++..... ..+.
T Consensus 272 FS~e~f~viy~kFweLD~Dhd~lidk~~L~ry~d~tlt~~ivdRIFs~v~r~~~~~~eGrmdykdFv~FilA~e~-k~t~ 350 (493)
T KOG2562|consen 272 FSYEHFYVIYCKFWELDTDHDGLIDKEDLKRYGDHTLTERIVDRIFSQVPRGFTVKVEGRMDYKDFVDFILAEED-KDTP 350 (493)
T ss_pred eeHHHHHHHHHHHhhhccccccccCHHHHHHHhccchhhHHHHHHHhhccccceeeecCcccHHHHHHHHHHhcc-CCCc
Confidence 566777778888999999999999999998876554444 78999993 34456899999999998866543 3446
Q ss_pred HHHHHHhhhhCCCCCCcccHHHHHHHHHHh-------C-CCCc-HHHHHHHHHHhCCCCCCceeHHHHHH
Q 008641 465 QACELAFAECDPDGNGFISENQLEVTIRPA-------I-PDLN-KYEIDSLFRLFDSDGDGRVSRDDFIC 525 (558)
Q Consensus 465 ~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~-------~-~~~~-~~~i~~lf~~~D~d~dG~Is~~eF~~ 525 (558)
.-++-+|+.+|.+++|.|+.+|++-+.... + +.++ ++-+.+++...-....|+|+.++|..
T Consensus 351 ~SleYwFrclDld~~G~Lt~~el~~fyeeq~~rm~~~~~e~l~fed~l~qi~DMvkP~~~~kItLqDlk~ 420 (493)
T KOG2562|consen 351 ASLEYWFRCLDLDGDGILTLNELRYFYEEQLQRMECMGQEALPFEDALCQIRDMVKPEDENKITLQDLKG 420 (493)
T ss_pred cchhhheeeeeccCCCcccHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHhCccCCCceeHHHHhh
Confidence 789999999999999999999987765432 2 2233 45567788877767789999999987
No 89
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=98.49 E-value=2.4e-09 Score=101.91 Aligned_cols=227 Identities=26% Similarity=0.375 Sum_probs=158.6
Q ss_pred CchhHHHHH-HHHHHHHHHHHHHhhCeEEEEEcccc-------CC-----------------CCCCCEEEeCCCCchhHH
Q 008641 136 PMPVWRSRL-MWVTRVCSRCILFSFGYHWIRRKGKP-------AP-----------------RQIAPIVVSNHISYIEPI 190 (558)
Q Consensus 136 ~~~~~~~~~-~~~~~~~~r~~~~~~g~~~~~~~g~~-------~~-----------------~~~~~iivsNH~S~~D~~ 190 (558)
.+.+|++.. ....++..+.+++.+|+.|+.+.-.. ++ ++.+.=.++||.|+.|..
T Consensus 122 ~~t~Wq~~~~v~~~~~~~~~l~~~~~~~~i~~~~P~~ee~~d~~~~at~v~~~maealg~~vtd~t~edc~l~vs~gql~ 201 (412)
T KOG4666|consen 122 HMEGWKRTVIVRSGRFLSRVLLFVFGFYWIHESCPDRDSDMDSNPKTTSTEINMAEALGTEVTDRTGEDCSLHVSYGQLL 201 (412)
T ss_pred ceeccccchHHHHHHHHHHHHHhheeEEEEeccCCChhhhcCCcccchhHHHHHHHhhCCCCCCCchHHHHHHHhhccEe
Confidence 355686664 66788889999999999998875211 00 233455678999999965
Q ss_pred HHhhhcccceeeccccCCCCHHHHHHHhcceEEEecCCccchHHHHHHHHH---HHhcCCCCeEEEeeCceecCCCcccc
Q 008641 191 FFFYELFPTIVASESHDSIPFVGTIIRAMQVIYVDRFSQSSRKNAVSEIKR---KASCDRFPRVLLFPEGTTTNGKFLIS 267 (558)
Q Consensus 191 ~l~~~~~p~~v~k~~l~~~p~~g~~~~~~g~i~v~r~~~~~~~~~~~~~~~---~l~~~~~~~l~iFPEGt~s~~~~ll~ 267 (558)
+-+.+..|.|+++....+.|+.|..-..-|+..+.|..+...-...+-++. ...+.-.+...+|||||.+|+.-..-
T Consensus 202 lpm~a~l~eF~~~~r~lkL~~~gl~k~ld~y~~var~~kg~~igi~efa~~l~vpvsd~l~~~f~LFde~~tg~~D~re~ 281 (412)
T KOG4666|consen 202 LPMSASLPEFVAKRRVLKLPLVGLIKKLDGYVYVAREAKGPDIGIVEFAVNLRVPVSDKLAPTFMLFDEGTTGNGDYRET 281 (412)
T ss_pred cccccchHHHHHHHhccCCChHHHHHHHhhHHHHHHhccCCCcceeEeeeeeecchhhhhhhhhheecCCCCCcccHHHH
Confidence 556666788999999999999999999999888888654432221111100 00011113678999999999999999
Q ss_pred cccccccCCCceeEEEEEccCCCCCCCCCCccHHHHHHHHhccccceEEEEEecccCCCcccccCHHHHHHHHHHHHHHh
Q 008641 268 FQLGAFIPAYPIQPVIVRYPHVHFDQSWGDVSLGKLMFRMFTQFHNFMEVEYLPVVFPSDNQKENALRFAERTSHAMASA 347 (558)
Q Consensus 268 Fk~Gaf~~~~pI~Pv~i~y~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~v~~l~pi~~~~~~~~~~~~~~~~v~~~i~~~ 347 (558)
++.+|+-++-|+.|+.|.|..+.++..|....- .+.+.+++|-...+.+-=.+.+.++-.++++++..+..+++-++..
T Consensus 282 v~~lavlc~p~~t~~iiq~afk~f~v~eDg~~g-e~~ls~ilq~~lgv~~l~v~~lf~~i~q~d~~ki~~~~f~~fa~~~ 360 (412)
T KOG4666|consen 282 VKTLAVLCGPPVTPVIIQYAFKRFSVAEDGISG-EHILSLILQVVLGVEVLRVPVLFPSIEQKDDPKIYASNFRKFAATE 360 (412)
T ss_pred hhhheeeeCCCCcHHHHHHHHHhcccccccccc-hHHHHHHHHHhcCcceeeccccchhhhcccCcceeHHHHHHHHHhC
Confidence 999999999999999999999999999944322 2444455543333333333444555556778889999999988887
Q ss_pred cCCcccCCchhhHHHH
Q 008641 348 LNAVQTSHAYGDLMLL 363 (558)
Q Consensus 348 l~~~~~~~~~~d~~~~ 363 (558)
-+....+.+|-|....
T Consensus 361 p~~a~~~~~yld~~~~ 376 (412)
T KOG4666|consen 361 PNLALSELGYLDKRIY 376 (412)
T ss_pred chhhhhhhccccchhe
Confidence 7766666666665543
No 90
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=98.48 E-value=9.1e-07 Score=87.55 Aligned_cols=98 Identities=14% Similarity=0.290 Sum_probs=88.4
Q ss_pred HHHHHHhhhcCCCCCceeHHHHHHHHHhhccCcchhHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCcHHHHHHHHH
Q 008641 429 LSDEIFGFIDVDKNGSITFKQFLYASAHVMKLPLFWQACELAFAECDPDGNGFISENQLEVTIRPAIPDLNKYEIDSLFR 508 (558)
Q Consensus 429 ~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~i~~lf~ 508 (558)
.++.+|+.+|.+++|.++..+....+..+.......+....+|+.+|.|.||.++++||++.+.. .+.++..+|+
T Consensus 15 r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~-----~E~~l~~~F~ 89 (463)
T KOG0036|consen 15 RIRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDN-----KELELYRIFQ 89 (463)
T ss_pred HHHHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHHH-----hHHHHHHHHh
Confidence 57899999999999999999999998888777555788899999999999999999999999975 5678999999
Q ss_pred HhCCCCCCceeHHHHHHHHHhCc
Q 008641 509 LFDSDGDGRVSRDDFICCLRKNP 531 (558)
Q Consensus 509 ~~D~d~dG~Is~~eF~~~l~~~~ 531 (558)
..|.++||.|+.+|..+.++...
T Consensus 90 ~iD~~hdG~i~~~Ei~~~l~~~g 112 (463)
T KOG0036|consen 90 SIDLEHDGKIDPNEIWRYLKDLG 112 (463)
T ss_pred hhccccCCccCHHHHHHHHHHhC
Confidence 99999999999999998887643
No 91
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=98.44 E-value=5.4e-07 Score=72.51 Aligned_cols=66 Identities=17% Similarity=0.265 Sum_probs=56.6
Q ss_pred HHHHHHhhhhCCC--CCCcccHHHHHHHHH-HhCCCCc----HHHHHHHHHHhCCCCCCceeHHHHHHHHHhC
Q 008641 465 QACELAFAECDPD--GNGFISENQLEVTIR-PAIPDLN----KYEIDSLFRLFDSDGDGRVSRDDFICCLRKN 530 (558)
Q Consensus 465 ~~~~~~F~~~D~d--~~G~Is~~E~~~~l~-~~~~~~~----~~~i~~lf~~~D~d~dG~Is~~eF~~~l~~~ 530 (558)
..+...|..|+.. ++|.|+.+||+.++. ..+..++ +++++.+|+.+|.|+||.|+|+||+.++...
T Consensus 8 ~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~~ 80 (88)
T cd05030 8 ETIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIKV 80 (88)
T ss_pred HHHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 4577889999865 479999999999997 4555565 8999999999999999999999999988754
No 92
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.43 E-value=9.2e-07 Score=70.97 Aligned_cols=66 Identities=8% Similarity=0.137 Sum_probs=54.2
Q ss_pred hHHHHHHHHHHHhhCC-CC-CCcccHHHHHHHhc------cCCc-HHHHHHHhhhcCCCCCceeHHHHHHHHHhh
Q 008641 392 SLEAVNFLEKFLSMNP-DP-SGCVKLLDFLSVLR------LKTC-PLSDEIFGFIDVDKNGSITFKQFLYASAHV 457 (558)
Q Consensus 392 ~~~~~~~~~~F~~~D~-d~-~G~Is~~ef~~~l~------~~~~-~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~ 457 (558)
.+.+..+...|.+||. |+ +|+|+.+||+.++. ...+ +++.++++.+|.|++|.|+|+||+.++..+
T Consensus 6 e~~~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l 80 (88)
T cd05029 6 DQAIGLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGAL 80 (88)
T ss_pred HHHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence 3456778899999998 66 79999999988773 3333 489999999999999999999999887655
No 93
>PF14658 EF-hand_9: EF-hand domain
Probab=98.41 E-value=1.1e-06 Score=65.00 Aligned_cols=61 Identities=25% Similarity=0.428 Sum_probs=57.1
Q ss_pred HHhhhhCCCCCCcccHHHHHHHHHHhCC-CCcHHHHHHHHHHhCCCCC-CceeHHHHHHHHHh
Q 008641 469 LAFAECDPDGNGFISENQLEVTIRPAIP-DLNKYEIDSLFRLFDSDGD-GRVSRDDFICCLRK 529 (558)
Q Consensus 469 ~~F~~~D~d~~G~Is~~E~~~~l~~~~~-~~~~~~i~~lf~~~D~d~d-G~Is~~eF~~~l~~ 529 (558)
.+|+.||.++.|.|...++..+|+.++. ..++.+++.+.+++|.++. |.|++++|..+|++
T Consensus 2 ~~F~~fD~~~tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 2 TAFDAFDTQKTGRVPVSDLITYLRAVTGRSPEESELQDLINELDPEGRDGSVNFDTFLAIMRD 64 (66)
T ss_pred cchhhcCCcCCceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHHH
Confidence 4799999999999999999999999987 8889999999999999987 99999999999875
No 94
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.39 E-value=9.8e-07 Score=71.82 Aligned_cols=65 Identities=14% Similarity=0.281 Sum_probs=53.3
Q ss_pred HHHHHHHHHHhhC-CCCCC-cccHHHHHHHhcc--------C-CcHHHHHHHhhhcCCCCCceeHHHHHHHHHhhc
Q 008641 394 EAVNFLEKFLSMN-PDPSG-CVKLLDFLSVLRL--------K-TCPLSDEIFGFIDVDKNGSITFKQFLYASAHVM 458 (558)
Q Consensus 394 ~~~~~~~~F~~~D-~d~~G-~Is~~ef~~~l~~--------~-~~~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~ 458 (558)
-+..++++|..|| .|++| .|+.+||..+|.. . ..++++++++.+|.|++|.|+|+||+.++..+.
T Consensus 7 ~~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~~ 82 (92)
T cd05025 7 AMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALT 82 (92)
T ss_pred HHHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHH
Confidence 3567899999996 99999 5999999888742 1 234799999999999999999999998887553
No 95
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.37 E-value=1.6e-06 Score=69.55 Aligned_cols=65 Identities=17% Similarity=0.282 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHhhC-CCCCC-cccHHHHHHHhcc--------CCcH-HHHHHHhhhcCCCCCceeHHHHHHHHHhh
Q 008641 393 LEAVNFLEKFLSMN-PDPSG-CVKLLDFLSVLRL--------KTCP-LSDEIFGFIDVDKNGSITFKQFLYASAHV 457 (558)
Q Consensus 393 ~~~~~~~~~F~~~D-~d~~G-~Is~~ef~~~l~~--------~~~~-~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~ 457 (558)
.-+..++++|..|| +|++| .|+.+||..+|.. ..++ ++.++++.+|.|++|.|+|+||+.++...
T Consensus 5 ~~~~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~ 80 (88)
T cd05027 5 KAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMV 80 (88)
T ss_pred HHHHHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 34677899999998 79999 5999999776643 3343 69999999999999999999998887654
No 96
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=98.36 E-value=1.8e-06 Score=86.01 Aligned_cols=137 Identities=20% Similarity=0.226 Sum_probs=95.9
Q ss_pred HHHHHHHHhhCCCCCCcccHHHHHHHhccC---------------C----cHHHHH--HHhhhcCCCCCceeHHHHHHHH
Q 008641 396 VNFLEKFLSMNPDPSGCVKLLDFLSVLRLK---------------T----CPLSDE--IFGFIDVDKNGSITFKQFLYAS 454 (558)
Q Consensus 396 ~~~~~~F~~~D~d~~G~Is~~ef~~~l~~~---------------~----~~~~~~--lf~~~D~d~~g~Is~~Ef~~~~ 454 (558)
..++-+|..||.|+||.|+.+||.....+. . ..++.. .--.|..+++++++++||..++
T Consensus 233 ~~F~IAFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~nsaL~~yFFG~rg~~kLs~deF~~F~ 312 (489)
T KOG2643|consen 233 RNFRIAFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEVNSALLTYFFGKRGNGKLSIDEFLKFQ 312 (489)
T ss_pred ccceeeeeeeecCCCCcccHHHHHHHHHHHHhccccceecccCccccceehhhhhhhHHHHhhccCCCccccHHHHHHHH
Confidence 456778999999999999999995543110 0 001111 2334688999999999999999
Q ss_pred HhhccCcchhHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCC-CCc--HHHHHHHHHHhCCCCCCceeHHHHHHHHH---
Q 008641 455 AHVMKLPLFWQACELAFAECDPDGNGFISENQLEVTIRPAIP-DLN--KYEIDSLFRLFDSDGDGRVSRDDFICCLR--- 528 (558)
Q Consensus 455 ~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~-~~~--~~~i~~lf~~~D~d~dG~Is~~eF~~~l~--- 528 (558)
..++ ++-++.-|..+|+..+|.|+..+|..++-..-. +.. ....+.+-+.++.+ +-.||++||..+..
T Consensus 313 e~Lq-----~Eil~lEF~~~~~~~~g~Ise~DFA~~lL~~a~~n~~~k~~~lkrvk~kf~~~-~~gISl~Ef~~Ff~Fl~ 386 (489)
T KOG2643|consen 313 ENLQ-----EEILELEFERFDKGDSGAISEVDFAELLLAYAGVNSKKKHKYLKRVKEKFKDD-GKGISLQEFKAFFRFLN 386 (489)
T ss_pred HHHH-----HHHHHHHHHHhCcccccccCHHHHHHHHHHHcccchHhHHHHHHHHHHhccCC-CCCcCHHHHHHHHHHHh
Confidence 8775 466778899999999999999999999876532 111 12355566677654 56699999887554
Q ss_pred hCcchHHHHh
Q 008641 529 KNPLLIAIFS 538 (558)
Q Consensus 529 ~~~~~~~~~~ 538 (558)
+..++...+.
T Consensus 387 ~l~dfd~Al~ 396 (489)
T KOG2643|consen 387 NLNDFDIALR 396 (489)
T ss_pred hhhHHHHHHH
Confidence 4444444443
No 97
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.34 E-value=1.2e-06 Score=66.52 Aligned_cols=58 Identities=22% Similarity=0.312 Sum_probs=41.0
Q ss_pred HHHHHhhCCCCCCcccHHHHHHHhccC--CcHHHHHHHhhhcCCCCCceeHHHHHHHHHh
Q 008641 399 LEKFLSMNPDPSGCVKLLDFLSVLRLK--TCPLSDEIFGFIDVDKNGSITFKQFLYASAH 456 (558)
Q Consensus 399 ~~~F~~~D~d~~G~Is~~ef~~~l~~~--~~~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~ 456 (558)
++.|..+|.|++|.|+.+|+..++... ..++++++++.+|.+++|.|+|+||+.++..
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g~~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~ 61 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSGLPRSVLAQIWDLADTDKDGKLDKEEFAIAMHL 61 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 456777888888888888876665221 3346777788888887888888888776654
No 98
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.34 E-value=1.5e-06 Score=70.08 Aligned_cols=66 Identities=17% Similarity=0.271 Sum_probs=55.6
Q ss_pred hHHHHHHHHHHHhhCC--CCCCcccHHHHHHHhcc----CC-----cHHHHHHHhhhcCCCCCceeHHHHHHHHHhh
Q 008641 392 SLEAVNFLEKFLSMNP--DPSGCVKLLDFLSVLRL----KT-----CPLSDEIFGFIDVDKNGSITFKQFLYASAHV 457 (558)
Q Consensus 392 ~~~~~~~~~~F~~~D~--d~~G~Is~~ef~~~l~~----~~-----~~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~ 457 (558)
+++++.++++|..+|+ |++|.|+.+||..++.. .. .+++..++..+|.+++|.|+|+||+.++...
T Consensus 4 ~~~~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~ 80 (88)
T cd00213 4 EKAIETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKL 80 (88)
T ss_pred HHHHHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHH
Confidence 4677889999999999 89999999999887632 12 3479999999999999999999999888654
No 99
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.32 E-value=1.8e-06 Score=69.38 Aligned_cols=66 Identities=17% Similarity=0.305 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHh-hCCCCCC-cccHHHHHHHhccC--------C-cHHHHHHHhhhcCCCCCceeHHHHHHHHHhhc
Q 008641 393 LEAVNFLEKFLS-MNPDPSG-CVKLLDFLSVLRLK--------T-CPLSDEIFGFIDVDKNGSITFKQFLYASAHVM 458 (558)
Q Consensus 393 ~~~~~~~~~F~~-~D~d~~G-~Is~~ef~~~l~~~--------~-~~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~ 458 (558)
..+..+..+|.. +|+|++| +|+.+||..+++.. . ..++.++++.+|.|+||.|+|+||+.++..+.
T Consensus 6 ~~i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l~ 82 (89)
T cd05023 6 RCIESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGLA 82 (89)
T ss_pred HHHHHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHH
Confidence 456788999999 6788876 99999999888543 1 24799999999999999999999998886653
No 100
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=98.32 E-value=1.5e-06 Score=79.90 Aligned_cols=135 Identities=15% Similarity=0.159 Sum_probs=95.2
Q ss_pred HHHHHHHHHHHhhCCCCCCcccHHHHHHHhccCCc-------HHHHHHHhhhcCCCCCceeHHHHHHHHHhhccCcch--
Q 008641 393 LEAVNFLEKFLSMNPDPSGCVKLLDFLSVLRLKTC-------PLSDEIFGFIDVDKNGSITFKQFLYASAHVMKLPLF-- 463 (558)
Q Consensus 393 ~~~~~~~~~F~~~D~d~~G~Is~~ef~~~l~~~~~-------~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~~-- 463 (558)
...+.++.+|.+.|.|.+|+|+..|+++.+..+.. ++.+..|+..|.|+||.|+++||..-+.........
T Consensus 98 rsrrklmviFsKvDVNtDrkisAkEmqrwImektaEHfqeameeSkthFraVDpdgDGhvsWdEykvkFlaskghsekev 177 (362)
T KOG4251|consen 98 RSRRKLMVIFSKVDVNTDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPDGDGHVSWDEYKVKFLASKGHSEKEV 177 (362)
T ss_pred HHHHHHHHHHhhcccCccccccHHHHHHHHHHHHHHHHHHHHhhhhhheeeeCCCCCCceehhhhhhHHHhhcCcchHHH
Confidence 34567899999999999999999999877643222 356778999999999999999998765443322110
Q ss_pred -----------hHHHHHHhhhhCCCCCCccc---------HHHHHHHHHHh-CCCCcHHHHHHHHHHhCCCCCCceeHHH
Q 008641 464 -----------WQACELAFAECDPDGNGFIS---------ENQLEVTIRPA-IPDLNKYEIDSLFRLFDSDGDGRVSRDD 522 (558)
Q Consensus 464 -----------~~~~~~~F~~~D~d~~G~Is---------~~E~~~~l~~~-~~~~~~~~i~~lf~~~D~d~dG~Is~~e 522 (558)
.++-.+.|..-+++..|..+ .+||..+|..- ..+.-...+++++..+|.|+|..++..|
T Consensus 178 adairlneelkVDeEtqevlenlkdRwyqaDsppadlllteeEflsFLHPEhSrgmLrfmVkeivrdlDqdgDkqlSvpe 257 (362)
T KOG4251|consen 178 ADAIRLNEELKVDEETQEVLENLKDRWYQADSPPADLLLTEEEFLSFLHPEHSRGMLRFMVKEIVRDLDQDGDKQLSVPE 257 (362)
T ss_pred HHHhhccCcccccHHHHHHHHhhhhhhccccCchhhhhhhHHHHHHHcChHhhhhhHHHHHHHHHHHhccCCCeeecchh
Confidence 01223334444445555444 48888887542 1234456788899999999999999999
Q ss_pred HHHHH
Q 008641 523 FICCL 527 (558)
Q Consensus 523 F~~~l 527 (558)
|+...
T Consensus 258 Fislp 262 (362)
T KOG4251|consen 258 FISLP 262 (362)
T ss_pred hhcCC
Confidence 98754
No 101
>PRK08419 lipid A biosynthesis lauroyl acyltransferase; Reviewed
Probab=98.32 E-value=2e-05 Score=79.13 Aligned_cols=163 Identities=12% Similarity=0.141 Sum_probs=101.7
Q ss_pred EEEccccCC-----CCCCCEEEeCCCCchhHHHHhhhc-c-c-ceeeccccCCCCHHHHHHH----hcceEEEecCCccc
Q 008641 164 IRRKGKPAP-----RQIAPIVVSNHISYIEPIFFFYEL-F-P-TIVASESHDSIPFVGTIIR----AMQVIYVDRFSQSS 231 (558)
Q Consensus 164 ~~~~g~~~~-----~~~~~iivsNH~S~~D~~~l~~~~-~-p-~~v~k~~l~~~p~~g~~~~----~~g~i~v~r~~~~~ 231 (558)
+.+.|.++. ..+|+|++++|.+.||........ . | ..+++.. +.|.+..++. ..|.-.+..
T Consensus 97 v~i~g~e~l~~a~~~g~gvI~~t~H~GnwE~~~~~l~~~~~~~~~v~~~~--~n~~~~~~~~~~R~~~g~~~i~~----- 169 (298)
T PRK08419 97 VTFINEENLLDALKKKRPIIVTTAHYGYWELFSLALAAYYGAVSIVGRLL--KSAPINEMISKRREQFGIELIDK----- 169 (298)
T ss_pred EEEECHHHHHHHHHcCCCEEEEeeCccHHHHHHHHHHhcCCCeEEEEeCC--CChHHHHHHHHHHHHcCCeeEEC-----
Confidence 566776652 356889999999999976543332 2 4 3455543 3366655443 233333321
Q ss_pred hHHHHHHHHHHHhcCCCCeEEEeeCceecCC-Ccccc-------cccc----cccCCCceeEEEEEccCCCCCCCCCCcc
Q 008641 232 RKNAVSEIKRKASCDRFPRVLLFPEGTTTNG-KFLIS-------FQLG----AFIPAYPIQPVIVRYPHVHFDQSWGDVS 299 (558)
Q Consensus 232 ~~~~~~~~~~~l~~~~~~~l~iFPEGt~s~~-~~ll~-------Fk~G----af~~~~pI~Pv~i~y~~~~~~~~w~~~~ 299 (558)
...+..+.+.+++|+ .|+++|....+.+ +...+ +..| |...++||+||.+....
T Consensus 170 -~~~~r~~l~~Lk~g~--~v~il~Dq~~~~~~gv~v~FfG~~a~~~~g~a~LA~k~~apvvpv~~~~~~----------- 235 (298)
T PRK08419 170 -KGAMKELLKALKQGR--ALGILVDQNVVPKEGVEVKFFNKRVTHTTIASILARRYNALIIPVFIFNDD----------- 235 (298)
T ss_pred -ccHHHHHHHHHHcCC--eEEEEecCCCCCCCCeEEecCCCCcccchhHHHHHHHHCCCEEEEEEEECC-----------
Confidence 335777888899998 9999995554322 33333 4455 33589999999995431
Q ss_pred HHHHHHHHhccccceEEEEEecccCCCccc--ccCHHHHHHHHHHHHHHhcCCcccCCchhh
Q 008641 300 LGKLMFRMFTQFHNFMEVEYLPVVFPSDNQ--KENALRFAERTSHAMASALNAVQTSHAYGD 359 (558)
Q Consensus 300 ~~~~~~~~~~~~~~~~~v~~l~pi~~~~~~--~~~~~~~~~~v~~~i~~~l~~~~~~~~~~d 359 (558)
....+|++.+|+.+...+ .++..+.++++-+.+.+.....+.+|=|-.
T Consensus 236 ------------~~~~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~lE~~Ir~~P~Qw~W~h 285 (298)
T PRK08419 236 ------------YSHFTITFFPPIRSKITDDAEADILEATQAQASACEEMIRKKPDEYFWFH 285 (298)
T ss_pred ------------CCeEEEEEcCCccCCCCCChHHHHHHHHHHHHHHHHHHHHhCchhheeHH
Confidence 224578888888754322 234566677777777777776677765533
No 102
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.31 E-value=2.1e-06 Score=70.15 Aligned_cols=63 Identities=14% Similarity=0.266 Sum_probs=48.3
Q ss_pred HHHHHHHHHhhCC-CC-CCcccHHHHHHHhcc--------CCc-HHHHHHHhhhcCCCCCceeHHHHHHHHHhh
Q 008641 395 AVNFLEKFLSMNP-DP-SGCVKLLDFLSVLRL--------KTC-PLSDEIFGFIDVDKNGSITFKQFLYASAHV 457 (558)
Q Consensus 395 ~~~~~~~F~~~D~-d~-~G~Is~~ef~~~l~~--------~~~-~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~ 457 (558)
...+.++|..||. |+ +|+|+.+|+..++.. ..+ ++++.+++.+|.+++|.|+|+||+.++...
T Consensus 7 ~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~ 80 (94)
T cd05031 7 MESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGL 80 (94)
T ss_pred HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 5668888999986 86 699999998776642 223 478888888888888889988888777543
No 103
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.30 E-value=2.2e-06 Score=72.31 Aligned_cols=63 Identities=17% Similarity=0.226 Sum_probs=52.1
Q ss_pred ChHHHHHHHHHHHhhCCCCCCcccHHHHHHHhccCCc-HHHHHHHhhhcCCCCCceeHHHHHHHH
Q 008641 391 SSLEAVNFLEKFLSMNPDPSGCVKLLDFLSVLRLKTC-PLSDEIFGFIDVDKNGSITFKQFLYAS 454 (558)
Q Consensus 391 t~~~~~~~~~~F~~~D~d~~G~Is~~ef~~~l~~~~~-~~~~~lf~~~D~d~~g~Is~~Ef~~~~ 454 (558)
.......+...|..+|.|+||.|+.+|+..+. +.+. ..+..+|+.+|.|+||.||++||..++
T Consensus 43 ~~~~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~-l~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl 106 (116)
T cd00252 43 YPMCKDPVGWMFNQLDGNYDGKLSHHELAPIR-LDPNEHCIKPFFESCDLDKDGSISLDEWCYCF 106 (116)
T ss_pred hHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHH-ccchHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 45667788899999999999999999998776 3333 367889999999999999999998887
No 104
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=98.30 E-value=2.5e-06 Score=85.83 Aligned_cols=135 Identities=21% Similarity=0.186 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHhhCCCCCCcccHHHHHH-HhccC----CcHHH-HHHHhhhcCCCCCceeHHHHHHHHHhhccCcchhHH
Q 008641 393 LEAVNFLEKFLSMNPDPSGCVKLLDFLS-VLRLK----TCPLS-DEIFGFIDVDKNGSITFKQFLYASAHVMKLPLFWQA 466 (558)
Q Consensus 393 ~~~~~~~~~F~~~D~d~~G~Is~~ef~~-~l~~~----~~~~~-~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~~~~~ 466 (558)
++...+--.|...+.++...++.++|.+ .+++. ..+++ +-+-...|..+||-|||+||..+-..+|.. +..
T Consensus 33 ~eLr~if~~~as~e~~ge~~mt~edFv~~ylgL~~e~~~n~~~v~Lla~iaD~tKDglisf~eF~afe~~lC~p---Dal 109 (694)
T KOG0751|consen 33 KELRSIFLKYASIEKNGESYMTPEDFVRRYLGLYNESNFNDKIVRLLASIADQTKDGLISFQEFRAFESVLCAP---DAL 109 (694)
T ss_pred HHHHHHHHHHhHHhhccccccCHHHHHHHHHhhcccccCChHHHHHHHhhhhhcccccccHHHHHHHHhhccCc---hHH
Confidence 3333344444555788888999999944 45542 22344 444455678899999999998876666553 567
Q ss_pred HHHHhhhhCCCCCCcccHHHHHHHHHHhCC-----------------------------------CCcHHHHHHHHHHhC
Q 008641 467 CELAFAECDPDGNGFISENQLEVTIRPAIP-----------------------------------DLNKYEIDSLFRLFD 511 (558)
Q Consensus 467 ~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~-----------------------------------~~~~~~i~~lf~~~D 511 (558)
.+.+|+.||+.++|.++.+++.+++..... +...|...+.|++.|
T Consensus 110 ~~~aFqlFDr~~~~~vs~~~~~~if~~t~l~~~~~f~~d~efI~~~Fg~~~~r~~ny~~f~Q~lh~~~~E~~~qafr~~d 189 (694)
T KOG0751|consen 110 FEVAFQLFDRLGNGEVSFEDVADIFGQTNLHHHIPFNWDSEFIKLHFGDIRKRHLNYAEFTQFLHEFQLEHAEQAFREKD 189 (694)
T ss_pred HHHHHHHhcccCCCceehHHHHHHHhccccccCCCccCCcchHHHHhhhHHHHhccHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 889999999999999999999999876321 112455677888889
Q ss_pred CCCCCceeHHHHHHHHHhC
Q 008641 512 SDGDGRVSRDDFICCLRKN 530 (558)
Q Consensus 512 ~d~dG~Is~~eF~~~l~~~ 530 (558)
..++|.|+--+|...|...
T Consensus 190 ~~~ng~is~Ldfq~imvt~ 208 (694)
T KOG0751|consen 190 KAKNGFISVLDFQDIMVTI 208 (694)
T ss_pred ccCCCeeeeechHhhhhhh
Confidence 9999999988888877664
No 105
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=98.30 E-value=5.6e-06 Score=69.75 Aligned_cols=104 Identities=13% Similarity=0.059 Sum_probs=90.0
Q ss_pred HHHHHHHhhhcCCCCCceeHHHHHHHHHhhccCcchhHHHHHHhhhhCCC--CCCcccHHHHHHHHHHhC---CCCcHHH
Q 008641 428 PLSDEIFGFIDVDKNGSITFKQFLYASAHVMKLPLFWQACELAFAECDPD--GNGFISENQLEVTIRPAI---PDLNKYE 502 (558)
Q Consensus 428 ~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~~~~~~~~~F~~~D~d--~~G~Is~~E~~~~l~~~~---~~~~~~~ 502 (558)
++++++|..||..+||+|++.+.-.+++.+...+. +.++......++.+ +--.|++++|.-+++.+. ...+-++
T Consensus 11 ~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~nPT-~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vaknk~q~t~ed 89 (152)
T KOG0030|consen 11 EEFKEAFLLFDRTGDGKISGSQVGDVLRALGQNPT-NAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKNKDQGTYED 89 (152)
T ss_pred HHHHHHHHHHhccCcccccHHHHHHHHHHhcCCCc-HHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhccccCcHHH
Confidence 58899999999999999999999999887766554 88899999999887 557899999999888764 3567788
Q ss_pred HHHHHHHhCCCCCCceeHHHHHHHHHhCcc
Q 008641 503 IDSLFRLFDSDGDGRVSRDDFICCLRKNPL 532 (558)
Q Consensus 503 i~~lf~~~D~d~dG~Is~~eF~~~l~~~~~ 532 (558)
.-+-++.||++++|.|...|+..++....+
T Consensus 90 fvegLrvFDkeg~G~i~~aeLRhvLttlGe 119 (152)
T KOG0030|consen 90 FVEGLRVFDKEGNGTIMGAELRHVLTTLGE 119 (152)
T ss_pred HHHHHHhhcccCCcceeHHHHHHHHHHHHh
Confidence 889999999999999999999999987654
No 106
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=98.25 E-value=4e-06 Score=74.92 Aligned_cols=66 Identities=24% Similarity=0.393 Sum_probs=58.4
Q ss_pred hHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCcHHHHHHHHHHhCCCCCCceeHHHHHHHHHh
Q 008641 464 WQACELAFAECDPDGNGFISENQLEVTIRPAIPDLNKYEIDSLFRLFDSDGDGRVSRDDFICCLRK 529 (558)
Q Consensus 464 ~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~~ 529 (558)
-+.+..+|+.||.|.||+|+..|++.+|..+|.+.+---++.+++..|.|.||+|++-||.-+.++
T Consensus 98 Ik~~~~~Fk~yDe~rDgfIdl~ELK~mmEKLgapQTHL~lK~mikeVded~dgklSfreflLIfrk 163 (244)
T KOG0041|consen 98 IKDAESMFKQYDEDRDGFIDLMELKRMMEKLGAPQTHLGLKNMIKEVDEDFDGKLSFREFLLIFRK 163 (244)
T ss_pred HHHHHHHHHHhcccccccccHHHHHHHHHHhCCchhhHHHHHHHHHhhcccccchhHHHHHHHHHH
Confidence 356788999999999999999999999999998888888999999999999999999999876654
No 107
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=98.23 E-value=2e-06 Score=53.17 Aligned_cols=28 Identities=39% Similarity=0.802 Sum_probs=19.2
Q ss_pred HHHHHHHHhCCCCCCceeHHHHHHHHHh
Q 008641 502 EIDSLFRLFDSDGDGRVSRDDFICCLRK 529 (558)
Q Consensus 502 ~i~~lf~~~D~d~dG~Is~~eF~~~l~~ 529 (558)
|++++|+.+|+|+||+|+++||..++++
T Consensus 1 E~~~~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 1 ELKEAFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 4566777777777777777777766654
No 108
>COG2121 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.19 E-value=7.8e-05 Score=67.62 Aligned_cols=154 Identities=12% Similarity=0.121 Sum_probs=104.0
Q ss_pred CCCCEEEeCCCC-chhHHHHhhhcccceeeccccCCCCHHHHHHHhcceEEEecCCccchHHHHHHHHHHHhcCCCCeEE
Q 008641 174 QIAPIVVSNHIS-YIEPIFFFYELFPTIVASESHDSIPFVGTIIRAMQVIYVDRFSQSSRKNAVSEIKRKASCDRFPRVL 252 (558)
Q Consensus 174 ~~~~iivsNH~S-~~D~~~l~~~~~p~~v~k~~l~~~p~~g~~~~~~g~i~v~r~~~~~~~~~~~~~~~~l~~~~~~~l~ 252 (558)
.+|.|+..=|-= .+-+++. --....+++-.....--+...++..+|...|.-++.+....++..+.+.+++|. .++
T Consensus 45 ~~p~I~afWHg~l~l~p~~~-~~~~~~~amvS~s~DGEliA~~l~kfG~~~IRGSs~Kgg~~Alr~l~k~Lk~G~--~i~ 121 (214)
T COG2121 45 EKPGIVAFWHGQLALGPFAF-PKGKKIYAMVSPSRDGELIARLLEKFGLRVIRGSSNKGGISALRALLKALKQGK--SIA 121 (214)
T ss_pred cCCeEEEEeccccccchhhc-cCCCcEEEEEcCCcCHHHHHHHHHHcCceEEeccCCcchHHHHHHHHHHHhCCC--cEE
Confidence 557777766642 2222211 111123444444555567788999999888876666777889999999999998 999
Q ss_pred EeeCceecCCCcccccccc----cccCCCceeEEEEEccCCCCCCCCCCccHHHHHHHHhccccceEEEEEecccCCCcc
Q 008641 253 LFPEGTTTNGKFLISFQLG----AFIPAYPIQPVIVRYPHVHFDQSWGDVSLGKLMFRMFTQFHNFMEVEYLPVVFPSDN 328 (558)
Q Consensus 253 iFPEGt~s~~~~ll~Fk~G----af~~~~pI~Pv~i~y~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~v~~l~pi~~~~~ 328 (558)
|-|+|-... ...-..| |-..++||+||++.+++-.--.+|+... +..+.++++|.+++|+..+.
T Consensus 122 itpDgPkGp---~~~~~~Gii~LA~~sg~pi~pv~~~~sr~~~lKsWDk~~--------IP~PFgk~~i~~gePi~~~~- 189 (214)
T COG2121 122 ITPDGPKGP---VHKIGDGIIALAQKSGVPIIPVGVATSRCWRLKTWDKTI--------IPLPFGKIKIVLGEPIEVDA- 189 (214)
T ss_pred EcCCCCCCC---ceeccchhhHhhHhcCCCeEEEEEeeeeeeeeccccccc--------ccCccceeEEEecCceeecc-
Confidence 999996654 3444566 4458999999999998744445675432 23357889999999998743
Q ss_pred cccCHHHHHHHHHHH
Q 008641 329 QKENALRFAERTSHA 343 (558)
Q Consensus 329 ~~~~~~~~~~~v~~~ 343 (558)
+++.+++.++..+.
T Consensus 190 -D~~~~~l~~~~~~~ 203 (214)
T COG2121 190 -DKDKEELEEKRQEV 203 (214)
T ss_pred -cccHHHHHHHHHHH
Confidence 35555655554443
No 109
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=98.15 E-value=8.9e-06 Score=72.71 Aligned_cols=102 Identities=15% Similarity=0.173 Sum_probs=77.3
Q ss_pred ccChHHHHHHHHHHHhhCCCCCCcccHHHHHHHhc---cCCcH-HHHHHHhhhcCCCCCceeHHHHHHHHHhhccCcchh
Q 008641 389 HISSLEAVNFLEKFLSMNPDPSGCVKLLDFLSVLR---LKTCP-LSDEIFGFIDVDKNGSITFKQFLYASAHVMKLPLFW 464 (558)
Q Consensus 389 ~lt~~~~~~~~~~F~~~D~d~~G~Is~~ef~~~l~---~~~~~-~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~~~ 464 (558)
.++..+++.+...|..||.+.||+|++.|++..+. ...+- .++.++...|.|.+|+|||.||+-++.........+
T Consensus 92 eFsrkqIk~~~~~Fk~yDe~rDgfIdl~ELK~mmEKLgapQTHL~lK~mikeVded~dgklSfreflLIfrkaaagEL~~ 171 (244)
T KOG0041|consen 92 EFSRKQIKDAESMFKQYDEDRDGFIDLMELKRMMEKLGAPQTHLGLKNMIKEVDEDFDGKLSFREFLLIFRKAAAGELQE 171 (244)
T ss_pred HHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHHhCCchhhHHHHHHHHHhhcccccchhHHHHHHHHHHHhcccccc
Confidence 46889999999999999999999999999988773 33333 689999999999999999999999887665433322
Q ss_pred H-HHHHHhh--hhCCCCCCcccHHHHHHH
Q 008641 465 Q-ACELAFA--ECDPDGNGFISENQLEVT 490 (558)
Q Consensus 465 ~-~~~~~F~--~~D~d~~G~Is~~E~~~~ 490 (558)
+ .+..+=+ ..|...-|......|-.+
T Consensus 172 ds~~~~LAr~~eVDVskeGV~GAknFFeA 200 (244)
T KOG0041|consen 172 DSGLLRLARLSEVDVSKEGVSGAKNFFEA 200 (244)
T ss_pred chHHHHHHHhcccchhhhhhhhHHHHHHH
Confidence 2 2222223 367777777777666544
No 110
>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=98.07 E-value=4.3e-05 Score=85.97 Aligned_cols=134 Identities=16% Similarity=0.268 Sum_probs=103.0
Q ss_pred cccccChHHHHHHHHHHHhhCCCCCCcccHHHHHHHh---ccC--------CcHHHHHHHhhhcCCCCCceeHHHHHHHH
Q 008641 386 SIFHISSLEAVNFLEKFLSMNPDPSGCVKLLDFLSVL---RLK--------TCPLSDEIFGFIDVDKNGSITFKQFLYAS 454 (558)
Q Consensus 386 ~~~~lt~~~~~~~~~~F~~~D~d~~G~Is~~ef~~~l---~~~--------~~~~~~~lf~~~D~d~~g~Is~~Ef~~~~ 454 (558)
...+.|.++.+++.-+|..||++++|.++.++|...| |.+ +.+++++++...|.+.+|+|+..+|..+|
T Consensus 2243 n~~GVtEe~L~EFs~~fkhFDkek~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afm 2322 (2399)
T KOG0040|consen 2243 NHNGVTEEQLKEFSMMFKHFDKEKNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFM 2322 (2399)
T ss_pred ccCCCCHHHHHHHHHHHHHhchhhccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHHHH
Confidence 3578999999999999999999999999999997665 443 22478999999999999999999999998
Q ss_pred HhhccC-cchhHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCcHHHHHHHH----HHhCCC----CCCceeHHHHHH
Q 008641 455 AHVMKL-PLFWQACELAFAECDPDGNGFISENQLEVTIRPAIPDLNKYEIDSLF----RLFDSD----GDGRVSRDDFIC 525 (558)
Q Consensus 455 ~~~~~~-~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~i~~lf----~~~D~d----~dG~Is~~eF~~ 525 (558)
...-.. -.+.+.++.+|+.+|. +.-+|+.+++... ++.++++-.+ ..+|+- -.+.++|.+|++
T Consensus 2323 i~~ETeNI~s~~eIE~AfraL~a-~~~yvtke~~~~~-------ltreqaefc~s~m~~~~e~~~~~s~q~~l~y~dfv~ 2394 (2399)
T KOG0040|consen 2323 ISKETENILSSEEIEDAFRALDA-GKPYVTKEELYQN-------LTREQAEFCMSKMKPYAETSSGRSDQVALDYKDFVN 2394 (2399)
T ss_pred HhcccccccchHHHHHHHHHhhc-CCccccHHHHHhc-------CCHHHHHHHHHHhhhhcccccCCCccccccHHHHHH
Confidence 754332 2235689999999998 7789999998664 3445544333 344432 234699999987
Q ss_pred HH
Q 008641 526 CL 527 (558)
Q Consensus 526 ~l 527 (558)
.+
T Consensus 2395 sl 2396 (2399)
T KOG0040|consen 2395 SL 2396 (2399)
T ss_pred HH
Confidence 54
No 111
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=98.05 E-value=5.2e-06 Score=51.28 Aligned_cols=27 Identities=30% Similarity=0.469 Sum_probs=16.1
Q ss_pred HHHHhhhhCCCCCCcccHHHHHHHHHH
Q 008641 467 CELAFAECDPDGNGFISENQLEVTIRP 493 (558)
Q Consensus 467 ~~~~F~~~D~d~~G~Is~~E~~~~l~~ 493 (558)
++.+|+.+|+|+||+|+++||..++++
T Consensus 2 ~~~~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 2 LKEAFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 455666666666666666666665543
No 112
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.05 E-value=1.7e-05 Score=58.57 Aligned_cols=59 Identities=24% Similarity=0.268 Sum_probs=29.3
Q ss_pred HHHHhhhcCCCCCceeHHHHHHHHHhhccCcchhHHHHHHhhhhCCCCCCcccHHHHHHH
Q 008641 431 DEIFGFIDVDKNGSITFKQFLYASAHVMKLPLFWQACELAFAECDPDGNGFISENQLEVT 490 (558)
Q Consensus 431 ~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~ 490 (558)
..+|+.+|.+++|.|+++||..++...... ...+.+..+|+.+|.+++|.|+.+||..+
T Consensus 3 ~~~f~~~d~~~~g~l~~~e~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~ef~~~ 61 (63)
T cd00051 3 REAFRLFDKDGDGTISADELKAALKSLGEG-LSEEEIDEMIREVDKDGDGKIDFEEFLEL 61 (63)
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHHhCCC-CCHHHHHHHHHHhCCCCCCeEeHHHHHHH
Confidence 344555555555555555555555443222 22444555555555555555555555443
No 113
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.05 E-value=1.3e-05 Score=57.94 Aligned_cols=51 Identities=27% Similarity=0.384 Sum_probs=30.2
Q ss_pred CCceeHHHHHHHHHhhccCcchhHHHHHHhhhhCCCCCCcccHHHHHHHHH
Q 008641 442 NGSITFKQFLYASAHVMKLPLFWQACELAFAECDPDGNGFISENQLEVTIR 492 (558)
Q Consensus 442 ~g~Is~~Ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~ 492 (558)
+|.|+.+||..++..+.....+++++..+|..+|.|++|.|+++||..++.
T Consensus 2 ~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~ 52 (54)
T PF13833_consen 2 DGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQ 52 (54)
T ss_dssp SSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHH
T ss_pred cCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Confidence 466666666666633322213355566666666666666666666666654
No 114
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.01 E-value=3.1e-05 Score=61.59 Aligned_cols=65 Identities=14% Similarity=0.315 Sum_probs=53.9
Q ss_pred HHHHHHhhhhCCCCCCcccHHHHHHHHHHhC-----CCCcHHHHHHHHHHhCCCCCCceeHHHHHHHHHhC
Q 008641 465 QACELAFAECDPDGNGFISENQLEVTIRPAI-----PDLNKYEIDSLFRLFDSDGDGRVSRDDFICCLRKN 530 (558)
Q Consensus 465 ~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~-----~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~~~ 530 (558)
..+...|..|. .+++.++..||+.++..-. ..-+++.++++|+.+|.|+||.|+|+||+.++...
T Consensus 8 ~~lI~~FhkYa-G~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~l 77 (91)
T cd05024 8 EKMMLTFHKFA-GEKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDDCRDGKVGFQSFFSLIAGL 77 (91)
T ss_pred HHHHHHHHHHc-CCCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 45678899988 4457999999999997632 24467889999999999999999999999988764
No 115
>PRK07920 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=97.99 E-value=0.00042 Score=69.53 Aligned_cols=161 Identities=12% Similarity=0.102 Sum_probs=99.5
Q ss_pred EEE--ccccCC-----CCCCCEEEeCCCCchhHHHHhhhc--cc-ceeeccccCCCCHH-H---HHHHhcceEEEecCCc
Q 008641 164 IRR--KGKPAP-----RQIAPIVVSNHISYIEPIFFFYEL--FP-TIVASESHDSIPFV-G---TIIRAMQVIYVDRFSQ 229 (558)
Q Consensus 164 ~~~--~g~~~~-----~~~~~iivsNH~S~~D~~~l~~~~--~p-~~v~k~~l~~~p~~-g---~~~~~~g~i~v~r~~~ 229 (558)
+++ +|.+.. ..+++|+++.|.+.||........ .| ..+.+. + +.+.+ . .+-...|.-.+..+.
T Consensus 90 v~i~~~g~e~l~~a~~~gkgvIllt~H~GnwE~~~~~l~~~~~~~~~vyr~-~-~n~~~~~~~~~~R~~~g~~~i~~~~- 166 (298)
T PRK07920 90 VRVSIEGLEHLDAALAAGRGVVLALPHSGNWDMAGAWLVQHHGPFTTVAER-L-KPESLYERFVAYRESLGFEVLPLTG- 166 (298)
T ss_pred hhhccCCHHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHcCCCeEEEEec-c-CCHHHHHHHHHHHHhcCCEEEecCC-
Confidence 455 665542 346889999999999976544333 24 334433 2 22322 2 233334533443221
Q ss_pred cchHHHHHHHHHHHhcCCCCeEEEeeCceecCCCccccc-------ccc----cccCCCceeEEEEEccCCCCCCCCCCc
Q 008641 230 SSRKNAVSEIKRKASCDRFPRVLLFPEGTTTNGKFLISF-------QLG----AFIPAYPIQPVIVRYPHVHFDQSWGDV 298 (558)
Q Consensus 230 ~~~~~~~~~~~~~l~~~~~~~l~iFPEGt~s~~~~ll~F-------k~G----af~~~~pI~Pv~i~y~~~~~~~~w~~~ 298 (558)
...+.++.+.+.+++|+ .+.+.|..+...++...+| .+| |...++||+|+.+.....
T Consensus 167 -~~~~~~r~ii~~Lk~g~--~v~il~Dq~~~~~g~~v~FFG~~a~t~~g~a~LA~~~~apVvp~~~~r~~~--------- 234 (298)
T PRK07920 167 -GERPPFEVLAERLRAGG--VVCLLADRDLTRSGVEVDFFGERTRMPAGPAALALETGAALLPVHLWFEGD--------- 234 (298)
T ss_pred -CCchHHHHHHHHHHcCC--eEEEEeccCccCCCCEEeeCCCCCCCCCCHHHHHHHHCCcEEEEEEEEeCC---------
Confidence 11346778899999998 9999999987654444444 344 334899999999865421
Q ss_pred cHHHHHHHHhccccceEEEEEecccCCCcccccCHHHHHHHHHHHHHHhcCCcccCCc
Q 008641 299 SLGKLMFRMFTQFHNFMEVEYLPVVFPSDNQKENALRFAERTSHAMASALNAVQTSHA 356 (558)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~v~~l~pi~~~~~~~~~~~~~~~~v~~~i~~~l~~~~~~~~ 356 (558)
+ .+|++.||+.... .++..+.++++-+.+.+.....+.+|=
T Consensus 235 --------------~-y~v~~~~~~~~~~--~~~~~~~t~~~~~~lE~~Ir~~PeQW~ 275 (298)
T PRK07920 235 --------------G-WGFRVHPPLDVPS--AEDVAAMTQALADAFAANIAAHPEDWH 275 (298)
T ss_pred --------------e-EEEEEeCCCCCCc--hhHHHHHHHHHHHHHHHHHHhChHHHh
Confidence 1 4788889887532 356667777777777777665566554
No 116
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=97.98 E-value=9.4e-05 Score=63.62 Aligned_cols=98 Identities=18% Similarity=0.199 Sum_probs=83.0
Q ss_pred HHHHHHhhhcCCCCCceeHHHHHHHHHhhccCcchhHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCC-CCcHHHHHHHH
Q 008641 429 LSDEIFGFIDVDKNGSITFKQFLYASAHVMKLPLFWQACELAFAECDPDGNGFISENQLEVTIRPAIP-DLNKYEIDSLF 507 (558)
Q Consensus 429 ~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~-~~~~~~i~~lf 507 (558)
+.++.|..+|.|+||.|+.++....+..+.+. ..++++..+++. ..|-|++.-|..++..... .-+++.+..+|
T Consensus 33 EfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~-~~d~elDaM~~E----a~gPINft~FLTmfGekL~gtdpe~~I~~AF 107 (171)
T KOG0031|consen 33 EFKEAFNLMDQNRDGFIDKEDLRDMLASLGKI-ASDEELDAMMKE----APGPINFTVFLTMFGEKLNGTDPEEVILNAF 107 (171)
T ss_pred HHHHHHHHHhccCCCcccHHHHHHHHHHcCCC-CCHHHHHHHHHh----CCCCeeHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 66889999999999999999999999988877 448889888875 5689999998888765433 33577799999
Q ss_pred HHhCCCCCCceeHHHHHHHHHhCc
Q 008641 508 RLFDSDGDGRVSRDDFICCLRKNP 531 (558)
Q Consensus 508 ~~~D~d~dG~Is~~eF~~~l~~~~ 531 (558)
+.||.++.|.|.-+.+.++|....
T Consensus 108 ~~FD~~~~G~I~~d~lre~Ltt~g 131 (171)
T KOG0031|consen 108 KTFDDEGSGKIDEDYLRELLTTMG 131 (171)
T ss_pred HhcCccCCCccCHHHHHHHHHHhc
Confidence 999999999999999999988653
No 117
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=97.96 E-value=3.4e-05 Score=65.35 Aligned_cols=92 Identities=22% Similarity=0.240 Sum_probs=74.0
Q ss_pred HhhCCCCCCcccHHHHHHHhcc----CCcH-HHHHHHhhhcCCCCCceeHHHHHHHHHhhccCcchhHHH----HHHhhh
Q 008641 403 LSMNPDPSGCVKLLDFLSVLRL----KTCP-LSDEIFGFIDVDKNGSITFKQFLYASAHVMKLPLFWQAC----ELAFAE 473 (558)
Q Consensus 403 ~~~D~d~~G~Is~~ef~~~l~~----~~~~-~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~~~~~~----~~~F~~ 473 (558)
+.|..|+.|.++.++|..++.. .+.+ .+...|+.+|-|+|+.|.-++....+..+.+...+.+++ ..+...
T Consensus 78 e~FSeDG~GnlsfddFlDmfSV~sE~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~eLs~eEv~~i~ekvieE 157 (189)
T KOG0038|consen 78 EVFSEDGRGNLSFDDFLDMFSVFSEMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRDELSDEEVELICEKVIEE 157 (189)
T ss_pred HHhccCCCCcccHHHHHHHHHHHHhhChHHhhhhheeEEeecCCCCcccHHHHHHHHHHHhhccCCHHHHHHHHHHHHHH
Confidence 3445789999999999877743 2333 467789999999999999999999999888877666655 455567
Q ss_pred hCCCCCCcccHHHHHHHHHHh
Q 008641 474 CDPDGNGFISENQLEVTIRPA 494 (558)
Q Consensus 474 ~D~d~~G~Is~~E~~~~l~~~ 494 (558)
.|.||||.|++.||.+++...
T Consensus 158 AD~DgDgkl~~~eFe~~i~ra 178 (189)
T KOG0038|consen 158 ADLDGDGKLSFAEFEHVILRA 178 (189)
T ss_pred hcCCCCCcccHHHHHHHHHhC
Confidence 799999999999999998653
No 118
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=97.91 E-value=5e-05 Score=77.92 Aligned_cols=102 Identities=21% Similarity=0.229 Sum_probs=73.1
Q ss_pred cccHHHHHHHhccCC--cHHHHHHHhhhcCCCCCceeHHHHHHH-HHhhccCcchhHHHHHHhhhhCCCCCCcccHHHHH
Q 008641 412 CVKLLDFLSVLRLKT--CPLSDEIFGFIDVDKNGSITFKQFLYA-SAHVMKLPLFWQACELAFAECDPDGNGFISENQLE 488 (558)
Q Consensus 412 ~Is~~ef~~~l~~~~--~~~~~~lf~~~D~d~~g~Is~~Ef~~~-~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~ 488 (558)
.++..+|+..++.+. .+.+.+=++.|-.|. ...++++.- +..+.+.......++.+|+.+|.|+||.|+.+||.
T Consensus 281 ~~~e~~f~~~~~~~~ma~ekl~egi~~F~~d~---~~L~~~i~~~~~~~~~~~~~~~~l~~aF~~~D~dgdG~Is~~E~~ 357 (391)
T PRK12309 281 HMDRATFDKMHAEDRMASEKLDEGIKGFSKAL---ETLEKLLAHRLARLEGGEAFTHAAQEIFRLYDLDGDGFITREEWL 357 (391)
T ss_pred CCCHHHHHHHhccCchHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHhhccChhhHHHHHHHHHhCCCCCCcCcHHHHH
Confidence 467777887776443 234444455554442 334554442 22244455557889999999999999999999994
Q ss_pred HHHHHhCCCCcHHHHHHHHHHhCCCCCCceeHHHHHHHHHh
Q 008641 489 VTIRPAIPDLNKYEIDSLFRLFDSDGDGRVSRDDFICCLRK 529 (558)
Q Consensus 489 ~~l~~~~~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~~ 529 (558)
. ++.+|+.+|.|+||.|+++||...+..
T Consensus 358 ~-------------~~~~F~~~D~d~DG~Is~eEf~~~~~~ 385 (391)
T PRK12309 358 G-------------SDAVFDALDLNHDGKITPEEMRAGLGA 385 (391)
T ss_pred H-------------HHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 2 578999999999999999999998864
No 119
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=97.88 E-value=4.1e-05 Score=61.60 Aligned_cols=65 Identities=17% Similarity=0.273 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHhhCCC--CCCcccHHHHHHHhcc----CC-----cHHHHHHHhhhcCCCCCceeHHHHHHHHHhh
Q 008641 393 LEAVNFLEKFLSMNPD--PSGCVKLLDFLSVLRL----KT-----CPLSDEIFGFIDVDKNGSITFKQFLYASAHV 457 (558)
Q Consensus 393 ~~~~~~~~~F~~~D~d--~~G~Is~~ef~~~l~~----~~-----~~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~ 457 (558)
..+..+...|..|+.. .+|.|+.+||..++.. .. .+++..+|+.+|.|++|.|+|+||+.++...
T Consensus 5 ~~i~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~~ 80 (88)
T cd05030 5 KAIETIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIKV 80 (88)
T ss_pred HHHHHHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 3466788889999865 4789999999888741 12 3478899999999999999999998887654
No 120
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=97.79 E-value=0.00017 Score=66.52 Aligned_cols=113 Identities=18% Similarity=0.267 Sum_probs=85.8
Q ss_pred ccHHHHHHHhccCCc-----HHHHHHHhhhcCCCCCceeHHHHHHHHHhhc----cCcc----hhHHHHHHhhhhCCCCC
Q 008641 413 VKLLDFLSVLRLKTC-----PLSDEIFGFIDVDKNGSITFKQFLYASAHVM----KLPL----FWQACELAFAECDPDGN 479 (558)
Q Consensus 413 Is~~ef~~~l~~~~~-----~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~----~~~~----~~~~~~~~F~~~D~d~~ 479 (558)
++.+||...|.-..+ ..++++...+|.|+|..++..||+.....-. .+.. .++..+..=..+|.|+|
T Consensus 216 lteeEflsFLHPEhSrgmLrfmVkeivrdlDqdgDkqlSvpeFislpvGTVenqqgqdiddnwvkdRkkEFeElIDsNhD 295 (362)
T KOG4251|consen 216 LTEEEFLSFLHPEHSRGMLRFMVKEIVRDLDQDGDKQLSVPEFISLPVGTVENQQGQDIDDNWVKDRKKEFEELIDSNHD 295 (362)
T ss_pred hhHHHHHHHcChHhhhhhHHHHHHHHHHHhccCCCeeecchhhhcCCCcchhhhhccchHHHHHHHHHHHHHHHhhcCCc
Confidence 455888888854333 2578899999999999999999987643211 1111 12233344467899999
Q ss_pred CcccHHHHHHHHHHhCCCCcHHHHHHHHHHhCCCCCCceeHHHHHH
Q 008641 480 GFISENQLEVTIRPAIPDLNKYEIDSLFRLFDSDGDGRVSRDDFIC 525 (558)
Q Consensus 480 G~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~ 525 (558)
|.++.+|+..++-.....+.-.++..++..-|.|+|.+++.+|..+
T Consensus 296 GivTaeELe~y~dP~n~~~alne~~~~ma~~d~n~~~~Ls~eell~ 341 (362)
T KOG4251|consen 296 GIVTAEELEDYVDPQNFRLALNEVNDIMALTDANNDEKLSLEELLE 341 (362)
T ss_pred cceeHHHHHhhcCchhhhhhHHHHHHHHhhhccCCCcccCHHHHHH
Confidence 9999999999987777677778899999999999999999999865
No 121
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=97.79 E-value=0.00012 Score=60.47 Aligned_cols=63 Identities=24% Similarity=0.357 Sum_probs=55.4
Q ss_pred hHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCcHHHHHHHHHHhCCCCCCceeHHHHHHHHHh
Q 008641 464 WQACELAFAECDPDGNGFISENQLEVTIRPAIPDLNKYEIDSLFRLFDSDGDGRVSRDDFICCLRK 529 (558)
Q Consensus 464 ~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~~ 529 (558)
......+|+..|. ++|.|+.++.+.++...+ ++.+.+.+++...|.|+||+++++||+-+|.-
T Consensus 9 ~~~y~~~F~~l~~-~~g~isg~~a~~~f~~S~--L~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~L 71 (104)
T PF12763_consen 9 KQKYDQIFQSLDP-QDGKISGDQAREFFMKSG--LPRDVLAQIWNLADIDNDGKLDFEEFAIAMHL 71 (104)
T ss_dssp HHHHHHHHHCTSS-STTEEEHHHHHHHHHHTT--SSHHHHHHHHHHH-SSSSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHhcCC-CCCeEeHHHHHHHHHHcC--CCHHHHHHHHhhhcCCCCCcCCHHHHHHHHHH
Confidence 5678899999985 579999999999998865 89999999999999999999999999877653
No 122
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=97.74 E-value=0.0001 Score=60.81 Aligned_cols=68 Identities=19% Similarity=0.342 Sum_probs=56.8
Q ss_pred ccChHHHHHHHHHHHhhCCCCCCcccHHHHHHHhccC--CcHHHHHHHhhhcCCCCCceeHHHHHHHHHhh
Q 008641 389 HISSLEAVNFLEKFLSMNPDPSGCVKLLDFLSVLRLK--TCPLSDEIFGFIDVDKNGSITFKQFLYASAHV 457 (558)
Q Consensus 389 ~lt~~~~~~~~~~F~~~D~d~~G~Is~~ef~~~l~~~--~~~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~ 457 (558)
.+++++..++.+.|...|. ++|.|+-++...++... +.+.+.++++..|.|++|.++++||+.+|...
T Consensus 3 ~ls~~e~~~y~~~F~~l~~-~~g~isg~~a~~~f~~S~L~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~Li 72 (104)
T PF12763_consen 3 KLSPEEKQKYDQIFQSLDP-QDGKISGDQAREFFMKSGLPRDVLAQIWNLADIDNDGKLDFEEFAIAMHLI 72 (104)
T ss_dssp --SCCHHHHHHHHHHCTSS-STTEEEHHHHHHHHHHTTSSHHHHHHHHHHH-SSSSSEEEHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCC-CCCeEeHHHHHHHHHHcCCCHHHHHHHHhhhcCCCCCcCCHHHHHHHHHHH
Confidence 4688899999999999985 68999999999888532 33589999999999999999999999988755
No 123
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=97.72 E-value=0.00012 Score=51.04 Aligned_cols=49 Identities=14% Similarity=0.248 Sum_probs=39.4
Q ss_pred cccHHHHHHHHHHhCCCCcHHHHHHHHHHhCCCCCCceeHHHHHHHHHh
Q 008641 481 FISENQLEVTIRPAIPDLNKYEIDSLFRLFDSDGDGRVSRDDFICCLRK 529 (558)
Q Consensus 481 ~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~~ 529 (558)
+++++|++.+|+.+...++++.+..+|+.+|++++|.+..+||..+.+.
T Consensus 1 kmsf~Evk~lLk~~NI~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~~ 49 (51)
T PF14788_consen 1 KMSFKEVKKLLKMMNIEMDDEYARQLFQECDKSQSGRLEGEEFEEFYKR 49 (51)
T ss_dssp EBEHHHHHHHHHHTT----HHHHHHHHHHH-SSSSSEBEHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHccCcCHHHHHHHHHHhcccCCCCccHHHHHHHHHH
Confidence 3688999999999998999999999999999999999999999888764
No 124
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.71 E-value=0.00019 Score=57.20 Aligned_cols=65 Identities=14% Similarity=0.204 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHhhCCCCCCcccHHHHHHHhcc---------CCcHHHHHHHhhhcCCCCCceeHHHHHHHHHhhc
Q 008641 393 LEAVNFLEKFLSMNPDPSGCVKLLDFLSVLRL---------KTCPLSDEIFGFIDVDKNGSITFKQFLYASAHVM 458 (558)
Q Consensus 393 ~~~~~~~~~F~~~D~d~~G~Is~~ef~~~l~~---------~~~~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~ 458 (558)
..+..+..+|..|-. ++++++..||..++.. .....+.++++..|.|+||.|+|+||+.++..+.
T Consensus 5 ~ai~~lI~~FhkYaG-~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~l~ 78 (91)
T cd05024 5 HSMEKMMLTFHKFAG-EKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDDCRDGKVGFQSFFSLIAGLL 78 (91)
T ss_pred HHHHHHHHHHHHHcC-CCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence 345678889999974 4579999999888732 1223789999999999999999999999887653
No 125
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.69 E-value=4.7e-05 Score=48.00 Aligned_cols=26 Identities=38% Similarity=0.617 Sum_probs=16.9
Q ss_pred HHHHhhhhCCCCCCcccHHHHHHHHH
Q 008641 467 CELAFAECDPDGNGFISENQLEVTIR 492 (558)
Q Consensus 467 ~~~~F~~~D~d~~G~Is~~E~~~~l~ 492 (558)
++.+|+.+|.|++|+|+.+||+++++
T Consensus 2 l~~~F~~~D~d~dG~I~~~el~~~l~ 27 (31)
T PF13405_consen 2 LREAFKMFDKDGDGFIDFEELRAILR 27 (31)
T ss_dssp HHHHHHHH-TTSSSEEEHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 45666667777777777777766666
No 126
>PLN02349 glycerol-3-phosphate acyltransferase
Probab=97.66 E-value=7.6e-05 Score=74.42 Aligned_cols=112 Identities=15% Similarity=0.178 Sum_probs=66.8
Q ss_pred CCCCCEEEeCCCCchhHHHHhhhcc---c------ceeeccccCCCCHHHHHHHhcc--eEEEecC---Cc-------cc
Q 008641 173 RQIAPIVVSNHISYIEPIFFFYELF---P------TIVASESHDSIPFVGTIIRAMQ--VIYVDRF---SQ-------SS 231 (558)
Q Consensus 173 ~~~~~iivsNH~S~~D~~~l~~~~~---p------~~v~k~~l~~~p~~g~~~~~~g--~i~v~r~---~~-------~~ 231 (558)
...++|++|||+|..|+-++..++. | .||+.+-...-|+...+.-.-+ +|+-.+. .+ +.
T Consensus 199 ~g~nVvllsNHQseaDp~ii~llle~~~p~iae~~iyvAGdrv~~DpL~~PFSmGrNLlCVySKKhm~d~Pelke~K~~~ 278 (426)
T PLN02349 199 QGHNVVLLSNHQSEADPAVIALLLEKSHPYLAENVTYVAGDRVVTDPLCKPFSMGRNLICVHSKKHMNDDPELKEMKRKA 278 (426)
T ss_pred cCCCEEEEeccccccchHHHHHHHhccCHHHHhhhhhhccceEeeccccCccccCCceEEEEeccccCCChhhHHHHHHH
Confidence 4567899999999999876655542 2 4666555444454443221122 3443331 11 12
Q ss_pred hHHHHHHHHHHHhcCCCCeEEEeeCceecCCCc-cccccccccc-------------CCCc--eeEEEEE
Q 008641 232 RKNAVSEIKRKASCDRFPRVLLFPEGTTTNGKF-LISFQLGAFI-------------PAYP--IQPVIVR 285 (558)
Q Consensus 232 ~~~~~~~~~~~l~~~~~~~l~iFPEGt~s~~~~-ll~Fk~Gaf~-------------~~~p--I~Pv~i~ 285 (558)
..+.++++...++.|+ ..++|||||+|++... ...+....|. +++| +.|.++.
T Consensus 279 N~kslk~~~~lL~~Gg-~~iwIaPsGgRdR~d~~~g~~~papFD~~svd~mR~l~~~s~~ptHfYPlAl~ 347 (426)
T PLN02349 279 NTRTLKEMALLLREGG-QLIWIAPSGGRDRPDPLTGEWTPAPFDPSAVDNMRRLTEKSKAPGHFYPLAML 347 (426)
T ss_pred HHHHHHHHHHHHhcCC-eEEEEeCCCCCCCCCccCCCccCCCCChHHHHHHHHHHHhcCCCccccchHHH
Confidence 3345777777888866 5899999999996654 3334444332 4555 6777764
No 127
>PF14658 EF-hand_9: EF-hand domain
Probab=97.66 E-value=0.00017 Score=53.37 Aligned_cols=55 Identities=20% Similarity=0.333 Sum_probs=31.9
Q ss_pred HHHhhCCCCCCcccHHHHHHHh---cc-CCcH-HHHHHHhhhcCCCC-CceeHHHHHHHHH
Q 008641 401 KFLSMNPDPSGCVKLLDFLSVL---RL-KTCP-LSDEIFGFIDVDKN-GSITFKQFLYASA 455 (558)
Q Consensus 401 ~F~~~D~d~~G~Is~~ef~~~l---~~-~~~~-~~~~lf~~~D~d~~-g~Is~~Ef~~~~~ 455 (558)
.|..+|.++.|.|...++..+| +. .+++ +++.+.+.+|.++. |.|+++.|+..|.
T Consensus 3 ~F~~fD~~~tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~ 63 (66)
T PF14658_consen 3 AFDAFDTQKTGRVPVSDLITYLRAVTGRSPEESELQDLINELDPEGRDGSVNFDTFLAIMR 63 (66)
T ss_pred chhhcCCcCCceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHH
Confidence 4666666666666666664444 22 3333 56666666666655 6666666666554
No 128
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=97.50 E-value=0.00016 Score=42.99 Aligned_cols=23 Identities=39% Similarity=0.784 Sum_probs=13.1
Q ss_pred HHHHHHhCCCCCCceeHHHHHHH
Q 008641 504 DSLFRLFDSDGDGRVSRDDFICC 526 (558)
Q Consensus 504 ~~lf~~~D~d~dG~Is~~eF~~~ 526 (558)
+++|+.+|.|+||.|+++||.++
T Consensus 2 ~~~F~~~D~d~DG~is~~E~~~~ 24 (25)
T PF13202_consen 2 KDAFQQFDTDGDGKISFEEFQRL 24 (25)
T ss_dssp HHHHHHHTTTSSSEEEHHHHHHH
T ss_pred HHHHHHHcCCCCCcCCHHHHHHH
Confidence 34555666666666666665543
No 129
>PF03279 Lip_A_acyltrans: Bacterial lipid A biosynthesis acyltransferase; InterPro: IPR004960 Bacterial lipopolysachharides (LPS) are glycolipids that make up the outer monolayer of the outer membranes of most Gram-negative bacteria. Though LPS moleculesare variable, they all show the same general features: an outer polysaccharide which is attached to the lipid component, termed lipid A []. The polysaccharide component consists of a variable repeat-structure polysaccharide known as the O-antigen, and a highly conserved short core oligosaccharide which connects the O-antigen to lipid A. Lipid A is a glucosamine-based phospholipid that makes up the membrane anchor region of LPS []. The structure of lipid A is relatively invariant between species, presumably reflecting its fundamental role in membrane integrity. Recognition of lipid A by the innate immune system can lead to a response even at picomolar levels. In some genera, such as Neisseria and Haemophilus, lipooligosaccharides (LOS) are the predominant glycolipids []. These are analogous to LPS except that they lack O-antigens, with the LOS oligosaccharide structures limited to 10 saccharide units. The bacterial lipid A biosynthesis protein, or lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 2.3.1 from EC, transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA during lipopolysaccharide core biosynthesis.; GO: 0016746 transferase activity, transferring acyl groups, 0009244 lipopolysaccharide core region biosynthetic process, 0016021 integral to membrane
Probab=97.48 E-value=0.011 Score=59.14 Aligned_cols=161 Identities=13% Similarity=0.164 Sum_probs=102.3
Q ss_pred EEEccccC-----CCCCCCEEEeCCCCchhHHHHhhhc-c-cceeeccccCCCCHHHHHH----HhcceEEEecCCccch
Q 008641 164 IRRKGKPA-----PRQIAPIVVSNHISYIEPIFFFYEL-F-PTIVASESHDSIPFVGTII----RAMQVIYVDRFSQSSR 232 (558)
Q Consensus 164 ~~~~g~~~-----~~~~~~iivsNH~S~~D~~~l~~~~-~-p~~v~k~~l~~~p~~g~~~----~~~g~i~v~r~~~~~~ 232 (558)
+.+.|.+. ....|+|+++-|.+.++........ . +..+.... .+.|.+..++ ...|.-.++.++
T Consensus 105 ~~~~g~e~l~~a~~~g~gvIl~t~H~GnwE~~~~~l~~~~~~~~~i~~~-~~n~~~~~~~~~~R~~~g~~~i~~~~---- 179 (295)
T PF03279_consen 105 VEIEGEEHLEAALAEGRGVILLTGHFGNWELAGRALARRGPPVAVIYRP-QKNPYIDRLLNKLRERFGIELIPKGE---- 179 (295)
T ss_pred EEEECHHHHHHHHhcCCCCEEeCcCcChHHHHHHHHHhhCCceEEEecC-CccHhHHHHHHHHHHhcCCeEecchh----
Confidence 56677554 2457899999999999965443332 2 32222222 2345554443 344544454332
Q ss_pred HHHHHHHHHHHhcCCCCeEEEeeCceecCC-Cccccc-------ccc----cccCCCceeEEEEEccCCCCCCCCCCccH
Q 008641 233 KNAVSEIKRKASCDRFPRVLLFPEGTTTNG-KFLISF-------QLG----AFIPAYPIQPVIVRYPHVHFDQSWGDVSL 300 (558)
Q Consensus 233 ~~~~~~~~~~l~~~~~~~l~iFPEGt~s~~-~~ll~F-------k~G----af~~~~pI~Pv~i~y~~~~~~~~w~~~~~ 300 (558)
.+.++.+.+++|+ .|++.+......+ +.-.+| -.| |...++||+||.......
T Consensus 180 --~~~~~~~~Lk~g~--~v~~l~Dq~~~~~~~~~v~FfG~~a~~~~g~a~lA~~~~apvvp~~~~r~~~----------- 244 (295)
T PF03279_consen 180 --GIRELIRALKEGG--IVGLLGDQDPGKKDGVFVPFFGRPASTPTGPARLARKTGAPVVPVFAYREPD----------- 244 (295)
T ss_pred --hHHHHHHHhccCC--EEEEEECCCCCCCCceEEeECCeecccccHHHHHHHHhCCcEEEEEEEEeCC-----------
Confidence 2777888999998 9999998765444 333444 233 334899999999876643
Q ss_pred HHHHHHHhccccceEEEEEecccCCCcccccCHHHHHHHHHHHHHHhcCCcccCCch
Q 008641 301 GKLMFRMFTQFHNFMEVEYLPVVFPSDNQKENALRFAERTSHAMASALNAVQTSHAY 357 (558)
Q Consensus 301 ~~~~~~~~~~~~~~~~v~~l~pi~~~~~~~~~~~~~~~~v~~~i~~~l~~~~~~~~~ 357 (558)
...+++++.||+.... .++.++.++++-+.+++.....+.+|-+
T Consensus 245 -----------~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~lE~~Ir~~P~QW~W 288 (295)
T PF03279_consen 245 -----------GSHYRIEIEPPLDFPS--SEDIEELTQRYNDRLEEWIREHPEQWFW 288 (295)
T ss_pred -----------CCEEEEEEeecccCCc--cchHHHHHHHHHHHHHHHHHcChHhhcc
Confidence 1245778888887643 3377788888888888877777777643
No 130
>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=97.46 E-value=0.00052 Score=77.73 Aligned_cols=100 Identities=20% Similarity=0.269 Sum_probs=83.2
Q ss_pred HHHHHHhhhcCCCCCceeHHHHHHHHHhhccCcc-h-----hHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCC--CCcH
Q 008641 429 LSDEIFGFIDVDKNGSITFKQFLYASAHVMKLPL-F-----WQACELAFAECDPDGNGFISENQLEVTIRPAIP--DLNK 500 (558)
Q Consensus 429 ~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~-~-----~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~--~~~~ 500 (558)
+..-+|+.||.+++|.+++++|..++..+....+ . +.+++.+....|++.+|+|+..|+.++|..... -.+.
T Consensus 2254 EFs~~fkhFDkek~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi~~ETeNI~s~ 2333 (2399)
T KOG0040|consen 2254 EFSMMFKHFDKEKNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFMISKETENILSS 2333 (2399)
T ss_pred HHHHHHHHhchhhccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHHHHHhcccccccch
Confidence 5788999999999999999999999998776542 2 348999999999999999999999999876532 3467
Q ss_pred HHHHHHHHHhCCCCCCceeHHHHHHHHHh
Q 008641 501 YEIDSLFRLFDSDGDGRVSRDDFICCLRK 529 (558)
Q Consensus 501 ~~i~~lf~~~D~d~dG~Is~~eF~~~l~~ 529 (558)
++++.+|+.+|. +.-+|+.++....|.+
T Consensus 2334 ~eIE~AfraL~a-~~~yvtke~~~~~ltr 2361 (2399)
T KOG0040|consen 2334 EEIEDAFRALDA-GKPYVTKEELYQNLTR 2361 (2399)
T ss_pred HHHHHHHHHhhc-CCccccHHHHHhcCCH
Confidence 799999999997 7788999887655543
No 131
>COG1560 HtrB Lauroyl/myristoyl acyltransferase [Cell envelope biogenesis, outer membrane]
Probab=97.43 E-value=0.0084 Score=59.76 Aligned_cols=164 Identities=14% Similarity=0.092 Sum_probs=110.4
Q ss_pred EEEEccccCC-----CCCCCEEEeCCCCchhHHHHhhhc-ccceeeccccCCCCHHHHHHHhc----ceEEEecCCccch
Q 008641 163 WIRRKGKPAP-----RQIAPIVVSNHISYIEPIFFFYEL-FPTIVASESHDSIPFVGTIIRAM----QVIYVDRFSQSSR 232 (558)
Q Consensus 163 ~~~~~g~~~~-----~~~~~iivsNH~S~~D~~~l~~~~-~p~~v~k~~l~~~p~~g~~~~~~----g~i~v~r~~~~~~ 232 (558)
++.+.|.++. ..+|+|+++-|.+.+|....+... .|.+.+--.-.+.|.+.+++... |.-.+.+.
T Consensus 106 ~~~v~g~e~l~e~l~~~~gvIl~~~H~gn~E~~~~~l~~~~~~~~~~yrp~~np~ld~~i~~~R~r~~~~~~~~~----- 180 (308)
T COG1560 106 RVEVEGLEHLEEALANGRGVILVTPHFGNWELGGRALAQQGPKVTAMYRPPKNPLLDWLITRGRERFGGRLLPRK----- 180 (308)
T ss_pred eeeecCHHHHHHHHHcCCCEEEEecCcchHHHHHHHHHHhCCCeeEEecCCCCHHHHHHHHHHHHhcCCcccCCC-----
Confidence 4677777652 456899999999999976665553 34422222335678887776553 22222322
Q ss_pred HHHHHHHHHHHhcCCCCeEEEeeCceecCCCc-ccccc-------cc----cccCCCceeEEEEEccCCCCCCCCCCccH
Q 008641 233 KNAVSEIKRKASCDRFPRVLLFPEGTTTNGKF-LISFQ-------LG----AFIPAYPIQPVIVRYPHVHFDQSWGDVSL 300 (558)
Q Consensus 233 ~~~~~~~~~~l~~~~~~~l~iFPEGt~s~~~~-ll~Fk-------~G----af~~~~pI~Pv~i~y~~~~~~~~w~~~~~ 300 (558)
...++.+.+.+++|+ .|.+-|+=..+.+.+ -.+|= +| |...+++|+|+...+...
T Consensus 181 ~~~ir~li~~Lk~G~--~v~~lpDqd~~~~~~vfvpFFg~~a~T~t~~~~LA~~~~a~vip~~~~r~~~----------- 247 (308)
T COG1560 181 GEGIRQLIKALKQGE--AVGYLPDQDYGPGESVFVPFFGVPAATTTGPAKLARLTGAAVVPVFPVRNPD----------- 247 (308)
T ss_pred chhHHHHHHHHhcCC--eEEEecCcccCCCCCeEeccCCCcccccchHHHHHHHhCCCEEEEEEEEeCC-----------
Confidence 267888999999999 899999998887776 34552 11 333789999999877532
Q ss_pred HHHHHHHhccccceEEEEEecccCCCcccccCHHHHHHHHHHHHHHhcCCcccCCch
Q 008641 301 GKLMFRMFTQFHNFMEVEYLPVVFPSDNQKENALRFAERTSHAMASALNAVQTSHAY 357 (558)
Q Consensus 301 ~~~~~~~~~~~~~~~~v~~l~pi~~~~~~~~~~~~~~~~v~~~i~~~l~~~~~~~~~ 357 (558)
.+..++++.||..- ...+|.++.++++-+.|++....-+.+|-|
T Consensus 248 -----------g~~y~l~i~p~~~~--~~~~D~~~~a~~mn~~~E~~I~~~PeQy~W 291 (308)
T COG1560 248 -----------GSGYTLHIHPPMTD--DPSEDVEADAQRMNDFVEKWIRAHPEQYMW 291 (308)
T ss_pred -----------CCeEEEEEeccccC--CCCCCHHHHHHHHHHHHHHHHHcChHHHHH
Confidence 34568888885542 445677777777777777776666777654
No 132
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=97.39 E-value=0.00018 Score=42.71 Aligned_cols=23 Identities=35% Similarity=0.497 Sum_probs=14.6
Q ss_pred HHHhhhhCCCCCCcccHHHHHHH
Q 008641 468 ELAFAECDPDGNGFISENQLEVT 490 (558)
Q Consensus 468 ~~~F~~~D~d~~G~Is~~E~~~~ 490 (558)
+.+|+.+|.|+||.|+.+||.++
T Consensus 2 ~~~F~~~D~d~DG~is~~E~~~~ 24 (25)
T PF13202_consen 2 KDAFQQFDTDGDGKISFEEFQRL 24 (25)
T ss_dssp HHHHHHHTTTSSSEEEHHHHHHH
T ss_pred HHHHHHHcCCCCCcCCHHHHHHH
Confidence 45566666666666666666654
No 133
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=97.33 E-value=0.0018 Score=65.85 Aligned_cols=108 Identities=17% Similarity=0.140 Sum_probs=76.5
Q ss_pred HHHHHHHHhhCCCCCCcccHHHHHHHhccCC----------cHHHHHHHhhhcCCCCCceeHHHHHHHHHhhccCcchhH
Q 008641 396 VNFLEKFLSMNPDPSGCVKLLDFLSVLRLKT----------CPLSDEIFGFIDVDKNGSITFKQFLYASAHVMKLPLFWQ 465 (558)
Q Consensus 396 ~~~~~~F~~~D~d~~G~Is~~ef~~~l~~~~----------~~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~~~~ 465 (558)
...+.+|+.||+.++|.++.+++..+++... ++.++..| ..+....++|.||.+++..+. +|
T Consensus 108 al~~~aFqlFDr~~~~~vs~~~~~~if~~t~l~~~~~f~~d~efI~~~F---g~~~~r~~ny~~f~Q~lh~~~-----~E 179 (694)
T KOG0751|consen 108 ALFEVAFQLFDRLGNGEVSFEDVADIFGQTNLHHHIPFNWDSEFIKLHF---GDIRKRHLNYAEFTQFLHEFQ-----LE 179 (694)
T ss_pred HHHHHHHHHhcccCCCceehHHHHHHHhccccccCCCccCCcchHHHHh---hhHHHHhccHHHHHHHHHHHH-----HH
Confidence 3456778888888888888888888875421 12344433 334456788888888887664 45
Q ss_pred HHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCcHHHHHHHHHHhC
Q 008641 466 ACELAFAECDPDGNGFISENQLEVTIRPAIPDLNKYEIDSLFRLFD 511 (558)
Q Consensus 466 ~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D 511 (558)
..+++|+..|+.++|.|+.-+|+.++......+....+++.+-...
T Consensus 180 ~~~qafr~~d~~~ng~is~Ldfq~imvt~~~h~lt~~v~~nlv~va 225 (694)
T KOG0751|consen 180 HAEQAFREKDKAKNGFISVLDFQDIMVTIRIHLLTPFVEENLVSVA 225 (694)
T ss_pred HHHHHHHHhcccCCCeeeeechHhhhhhhhhhcCCHHHhhhhhhhc
Confidence 6789999999999999999999998877654444445555544443
No 134
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=97.32 E-value=0.00064 Score=68.87 Aligned_cols=127 Identities=17% Similarity=0.170 Sum_probs=96.3
Q ss_pred HHHHHHHhhCCCCCCcccHHHHHHHh-----c-cC----Cc--------H---HHHHHHhhhcCCCCCceeHHHHHHHHH
Q 008641 397 NFLEKFLSMNPDPSGCVKLLDFLSVL-----R-LK----TC--------P---LSDEIFGFIDVDKNGSITFKQFLYASA 455 (558)
Q Consensus 397 ~~~~~F~~~D~d~~G~Is~~ef~~~l-----~-~~----~~--------~---~~~~lf~~~D~d~~g~Is~~Ef~~~~~ 455 (558)
.+++.|-..|+.++|+|+..|+.+.. . +. .. + .+-..|-.+|.|.||.|+-++....-.
T Consensus 226 vi~rIFy~~nrs~tG~iti~el~~snll~~l~~l~eEed~nq~~~~FS~e~f~viy~kFweLD~Dhd~lidk~~L~ry~d 305 (493)
T KOG2562|consen 226 VIQRIFYYLNRSRTGRITIQELLRSNLLDALLELDEEEDINQVTRYFSYEHFYVIYCKFWELDTDHDGLIDKEDLKRYGD 305 (493)
T ss_pred HhhhhheeeCCccCCceeHHHHHHhHHHHHHHHHHHHhhhhhhhhheeHHHHHHHHHHHhhhccccccccCHHHHHHHhc
Confidence 35778888999999999999984431 1 10 00 1 123347788999999999999865543
Q ss_pred hhccCcchhHHHHHHhh----hhCCCCCCcccHHHHHHHHHHhCCCCcHHHHHHHHHHhCCCCCCceeHHHHHHHH
Q 008641 456 HVMKLPLFWQACELAFA----ECDPDGNGFISENQLEVTIRPAIPDLNKYEIDSLFRLFDSDGDGRVSRDDFICCL 527 (558)
Q Consensus 456 ~~~~~~~~~~~~~~~F~----~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l 527 (558)
...+..-++++|. .+-...+|.+++++|..++-+...+-+..-++-.|+-+|.++||.|+.+|...+.
T Consensus 306 ----~tlt~~ivdRIFs~v~r~~~~~~eGrmdykdFv~FilA~e~k~t~~SleYwFrclDld~~G~Lt~~el~~fy 377 (493)
T KOG2562|consen 306 ----HTLTERIVDRIFSQVPRGFTVKVEGRMDYKDFVDFILAEEDKDTPASLEYWFRCLDLDGDGILTLNELRYFY 377 (493)
T ss_pred ----cchhhHHHHHHHhhccccceeeecCcccHHHHHHHHHHhccCCCccchhhheeeeeccCCCcccHHHHHHHH
Confidence 2333566788888 3445568999999999999998878888889999999999999999998875544
No 135
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.27 E-value=0.0018 Score=69.14 Aligned_cols=135 Identities=20% Similarity=0.304 Sum_probs=105.9
Q ss_pred cChHHHHHHHHHHHhhCCCCCCcccHHHHHHHhc--cCCcHHHHHHHhhhcCCCCCceeHHHHHHHHHhhccCc------
Q 008641 390 ISSLEAVNFLEKFLSMNPDPSGCVKLLDFLSVLR--LKTCPLSDEIFGFIDVDKNGSITFKQFLYASAHVMKLP------ 461 (558)
Q Consensus 390 lt~~~~~~~~~~F~~~D~d~~G~Is~~ef~~~l~--~~~~~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~------ 461 (558)
+|.++..+..+.|..+- -+.|+||-.+-+.++- ..+...+.+++...|.|+||+++..||..+|.......
T Consensus 10 vT~~Er~K~~~qF~~Lk-p~~gfitg~qArnfflqS~LP~~VLaqIWALsDldkDGrmdi~EfSIAmkLi~lkLqG~~lP 88 (1118)
T KOG1029|consen 10 VTDEERQKHDAQFGQLK-PGQGFITGDQARNFFLQSGLPTPVLAQIWALSDLDKDGRMDIREFSIAMKLIKLKLQGIQLP 88 (1118)
T ss_pred cchHHHHHHHHHHhccC-CCCCccchHhhhhhHHhcCCChHHHHHHHHhhhcCccccchHHHHHHHHHHHHHHhcCCcCC
Confidence 57777777777888874 4679999888877662 23445788899999999999999999987765421000
Q ss_pred --------------------------------------------------------------------------------
Q 008641 462 -------------------------------------------------------------------------------- 461 (558)
Q Consensus 462 -------------------------------------------------------------------------------- 461 (558)
T Consensus 89 ~~LPPsll~~~~~~~p~~~p~fg~Gsls~~qpL~~a~p~~m~~s~v~~~Pv~vatvpS~~~~sl~nGplp~~~~spl~~~ 168 (1118)
T KOG1029|consen 89 PVLPPSLLKQPPRNAPSTWPGFGMGSLSYSQPLPPAAPRRMSSSPVVGPPVSVATVPSSRHNSLPNGPLPPTSNSPLPHD 168 (1118)
T ss_pred CCCChHHhccCCcCCCCCCCccCCCCcCcCCCCCcccccccCCCccCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCC
Confidence
Q ss_pred -----------------------chhHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCcHHHHHHHHHHhCCCCCCce
Q 008641 462 -----------------------LFWQACELAFAECDPDGNGFISENQLEVTIRPAIPDLNKYEIDSLFRLFDSDGDGRV 518 (558)
Q Consensus 462 -----------------------~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D~d~dG~I 518 (558)
...-+.+..|...|+...|+++-..-+.+|...+ ++...+..|+...|.|+||++
T Consensus 169 ss~se~~~~~~s~~q~~eWAVp~~~klKY~QlFNa~DktrsG~Lsg~qaR~aL~qS~--Lpq~~LA~IW~LsDvd~DGkL 246 (1118)
T KOG1029|consen 169 SSVSEGRPSIESVNQLEEWAVPQHNKLKYRQLFNALDKTRSGYLSGQQARSALGQSG--LPQNQLAHIWTLSDVDGDGKL 246 (1118)
T ss_pred cchhhcCccchhhhhhhhccccchhhhHHHHHhhhcccccccccccHHHHHHHHhcC--CchhhHhhheeeeccCCCCcc
Confidence 0011567889999999999999999999987654 889999999999999999999
Q ss_pred eHHHHHHHH
Q 008641 519 SRDDFICCL 527 (558)
Q Consensus 519 s~~eF~~~l 527 (558)
+-+||+-.|
T Consensus 247 ~~dEfilam 255 (1118)
T KOG1029|consen 247 SADEFILAM 255 (1118)
T ss_pred cHHHHHHHH
Confidence 999998655
No 136
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.20 E-value=0.00055 Score=43.07 Aligned_cols=28 Identities=36% Similarity=0.742 Sum_probs=24.7
Q ss_pred HHHHHHHHhCCCCCCceeHHHHHHHHHh
Q 008641 502 EIDSLFRLFDSDGDGRVSRDDFICCLRK 529 (558)
Q Consensus 502 ~i~~lf~~~D~d~dG~Is~~eF~~~l~~ 529 (558)
+++.+|+.+|.|+||.|+.+||..++++
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~~ 28 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILRK 28 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 4788999999999999999999999884
No 137
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=97.12 E-value=0.00093 Score=68.70 Aligned_cols=51 Identities=25% Similarity=0.453 Sum_probs=33.0
Q ss_pred HHHHHHhhhcCCCCCceeHHHHHHHHHhhccCcchhHHHHHHhhhhCCCCCCcccHHHHHHHHHH
Q 008641 429 LSDEIFGFIDVDKNGSITFKQFLYASAHVMKLPLFWQACELAFAECDPDGNGFISENQLEVTIRP 493 (558)
Q Consensus 429 ~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~ 493 (558)
++..+|+.+|.|+||.|+.+||.. +..+|+.+|.|+||.|+.+||.+.++.
T Consensus 335 ~l~~aF~~~D~dgdG~Is~~E~~~--------------~~~~F~~~D~d~DG~Is~eEf~~~~~~ 385 (391)
T PRK12309 335 AAQEIFRLYDLDGDGFITREEWLG--------------SDAVFDALDLNHDGKITPEEMRAGLGA 385 (391)
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHH--------------HHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 556666666666666666666632 245567777777777777777666654
No 138
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=97.10 E-value=0.00023 Score=59.97 Aligned_cols=61 Identities=23% Similarity=0.424 Sum_probs=40.5
Q ss_pred hHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCcHHHHHHHHHHhCCCCCCceeHHHHHHH
Q 008641 464 WQACELAFAECDPDGNGFISENQLEVTIRPAIPDLNKYEIDSLFRLFDSDGDGRVSRDDFICC 526 (558)
Q Consensus 464 ~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~ 526 (558)
...+.-.|..+|.|+||.|+..|++.+...+ .-.+.-+...++.+|.|+||.||..|+..+
T Consensus 53 ~~~~~W~F~~LD~n~d~~L~~~El~~l~~~l--~~~e~C~~~F~~~CD~n~d~~Is~~EW~~C 113 (113)
T PF10591_consen 53 KRVVHWKFCQLDRNKDGVLDRSELKPLRRPL--MPPEHCARPFFRSCDVNKDGKISLDEWCNC 113 (113)
T ss_dssp HHHHHHHHHHH--T-SSEE-TTTTGGGGSTT--STTGGGHHHHHHHH-TT-SSSEEHHHHHHH
T ss_pred hhhhhhhHhhhcCCCCCccCHHHHHHHHHHH--hhhHHHHHHHHHHcCCCCCCCCCHHHHccC
Confidence 4566777888888888888888887775533 234456788888888888888888888653
No 139
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=97.08 E-value=0.00067 Score=57.15 Aligned_cols=61 Identities=18% Similarity=0.251 Sum_probs=42.6
Q ss_pred hHHHHHHHHHHHhhCCCCCCcccHHHHHHHhc--cCCcHHHHHHHhhhcCCCCCceeHHHHHH
Q 008641 392 SLEAVNFLEKFLSMNPDPSGCVKLLDFLSVLR--LKTCPLSDEIFGFIDVDKNGSITFKQFLY 452 (558)
Q Consensus 392 ~~~~~~~~~~F~~~D~d~~G~Is~~ef~~~l~--~~~~~~~~~lf~~~D~d~~g~Is~~Ef~~ 452 (558)
......+.-.|..+|.|+||.++..|+..+.. .....-+...++..|.|+||.||..|+..
T Consensus 50 ~~~~~~~~W~F~~LD~n~d~~L~~~El~~l~~~l~~~e~C~~~F~~~CD~n~d~~Is~~EW~~ 112 (113)
T PF10591_consen 50 SECKRVVHWKFCQLDRNKDGVLDRSELKPLRRPLMPPEHCARPFFRSCDVNKDGKISLDEWCN 112 (113)
T ss_dssp GGGHHHHHHHHHHH--T-SSEE-TTTTGGGGSTTSTTGGGHHHHHHHH-TT-SSSEEHHHHHH
T ss_pred hhhhhhhhhhHhhhcCCCCCccCHHHHHHHHHHHhhhHHHHHHHHHHcCCCCCCCCCHHHHcc
Confidence 34455677789999999999999999977766 33334578889999999999999999864
No 140
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=97.03 E-value=0.0022 Score=44.77 Aligned_cols=48 Identities=17% Similarity=0.172 Sum_probs=30.8
Q ss_pred eeHHHHHHHHHhhccCcchhHHHHHHhhhhCCCCCCcccHHHHHHHHHH
Q 008641 445 ITFKQFLYASAHVMKLPLFWQACELAFAECDPDGNGFISENQLEVTIRP 493 (558)
Q Consensus 445 Is~~Ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~ 493 (558)
++|+|...++..+.-..+ ++.+..+|+.+|++++|.+..+||..+.+.
T Consensus 2 msf~Evk~lLk~~NI~~~-~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~~ 49 (51)
T PF14788_consen 2 MSFKEVKKLLKMMNIEMD-DEYARQLFQECDKSQSGRLEGEEFEEFYKR 49 (51)
T ss_dssp BEHHHHHHHHHHTT-----HHHHHHHHHHH-SSSSSEBEHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHccCcC-HHHHHHHHHHhcccCCCCccHHHHHHHHHH
Confidence 567777777655443333 666777777777777777777777777654
No 141
>PRK05646 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=97.03 E-value=0.066 Score=54.04 Aligned_cols=160 Identities=10% Similarity=0.041 Sum_probs=95.1
Q ss_pred EEEEccccC-----CCCCCCEEEeCCCCchhHHHHhhhcc-cc-eeeccccCCCCHHHHHHHhc----ce--EEEecCCc
Q 008641 163 WIRRKGKPA-----PRQIAPIVVSNHISYIEPIFFFYELF-PT-IVASESHDSIPFVGTIIRAM----QV--IYVDRFSQ 229 (558)
Q Consensus 163 ~~~~~g~~~-----~~~~~~iivsNH~S~~D~~~l~~~~~-p~-~v~k~~l~~~p~~g~~~~~~----g~--i~v~r~~~ 229 (558)
++.+.|.+. ....|+|+++-|...||......... +. .+.+. .+.|++..++... |. +.+
T Consensus 106 ~~~~~g~e~l~~a~~~gkgvI~~t~H~GnWE~~~~~~~~~~~~~~vyr~--~~n~~~d~~~~~~R~~~g~~~i~~----- 178 (310)
T PRK05646 106 LAHIEGLEHLQQAQQEGQGVILMALHFTTLEIGAALLGQQHTIDGMYRE--HKNPVFDFIQRRGRERHNLDSTAI----- 178 (310)
T ss_pred eEEEeCHHHHHHHHhCCCCEEEEecchhHHHHHHHHHHccCCCeEEeeC--CCCHHHHHHHHHHhhccCCCcccc-----
Confidence 366777654 23568899999999999755433322 32 23332 3557777665433 21 211
Q ss_pred cchHHHHHHHHHHHhcCCCCeEEEeeCceecCC-Ccccccc-------cc----cccCCCceeEEEEEccCCCCCCCCCC
Q 008641 230 SSRKNAVSEIKRKASCDRFPRVLLFPEGTTTNG-KFLISFQ-------LG----AFIPAYPIQPVIVRYPHVHFDQSWGD 297 (558)
Q Consensus 230 ~~~~~~~~~~~~~l~~~~~~~l~iFPEGt~s~~-~~ll~Fk-------~G----af~~~~pI~Pv~i~y~~~~~~~~w~~ 297 (558)
.++.++.+.+.+++|+ .|++-+--..+.+ +...+|- +| |...++||+|+.+.....
T Consensus 179 --~~~~~r~ilk~Lk~g~--~v~il~Dq~~~~~~gv~v~FfG~~a~t~~g~a~LA~~~~apvvp~~~~r~~~-------- 246 (310)
T PRK05646 179 --EREDVRGMLKLLRAGR--AIWYAPDQDYGAKQSIFVPLFGIPAATVTATTKFARLGRARVIPFTQKRLAD-------- 246 (310)
T ss_pred --cHhhHHHHHHHHhCCC--eEEEeCCCCCCCCCCEEecCCCCcchhhhHHHHHHHhhCCcEEEEEEEEeCC--------
Confidence 2335677888888898 8887765443322 3334552 22 334899999999965421
Q ss_pred ccHHHHHHHHhccccceEEEEEecccCCCcccccCHHHHHHHHHHHHHHhcCCcccCCch
Q 008641 298 VSLGKLMFRMFTQFHNFMEVEYLPVVFPSDNQKENALRFAERTSHAMASALNAVQTSHAY 357 (558)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~v~~l~pi~~~~~~~~~~~~~~~~v~~~i~~~l~~~~~~~~~ 357 (558)
....+|++.||+... ..++.++.++++-+.+.+.....+.+|-|
T Consensus 247 --------------g~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~lE~~Ir~~P~QW~W 290 (310)
T PRK05646 247 --------------GSGYRLVIHPPLEDF--PGESEEADCLRINQWVERVVRECPEQYLW 290 (310)
T ss_pred --------------CCeEEEEEeCCCcCC--CCCCHHHHHHHHHHHHHHHHHcCcHHHHH
Confidence 123578888887642 23555566666666666666666666644
No 142
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=97.02 E-value=0.0081 Score=64.94 Aligned_cols=135 Identities=14% Similarity=0.197 Sum_probs=107.3
Q ss_pred cChHHHHHHHHHHHhhCCCCCCcccHHHHHHHhccC---Cc-HHHHHHHhhhcCCCCCceeHHHHHHHHHhhccCcchhH
Q 008641 390 ISSLEAVNFLEKFLSMNPDPSGCVKLLDFLSVLRLK---TC-PLSDEIFGFIDVDKNGSITFKQFLYASAHVMKLPLFWQ 465 (558)
Q Consensus 390 lt~~~~~~~~~~F~~~D~d~~G~Is~~ef~~~l~~~---~~-~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~~~~ 465 (558)
...+....+...|+..|++++|.++..+...++... .. ..+..+|+..|..+++++..++|..+....... .
T Consensus 130 ~~~~~~~wi~~~~~~ad~~~~~~~~~~~~~~~~~~~n~~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~~~~r----p 205 (746)
T KOG0169|consen 130 QRSRREHWIHSIFQEADKNKNGHMSFDEVLDLLKQLNVQLSESKARRLFKESDNSQTGKLEEEEFVKFRKELTKR----P 205 (746)
T ss_pred hcchHHHHHHHHHHHHccccccccchhhHHHHHHHHHHhhhHHHHHHHHHHHHhhccceehHHHHHHHHHhhccC----c
Confidence 445556678899999999999999999987776432 22 267888999988899999999999888766553 2
Q ss_pred HHHHHhhhhCCCCCCcccHHHHHHHHHHhC--CCCcHHHHHHHHHHhCCC----CCCceeHHHHHHHHHh
Q 008641 466 ACELAFAECDPDGNGFISENQLEVTIRPAI--PDLNKYEIDSLFRLFDSD----GDGRVSRDDFICCLRK 529 (558)
Q Consensus 466 ~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~--~~~~~~~i~~lf~~~D~d----~dG~Is~~eF~~~l~~ 529 (558)
++...|..+-.+ .++++.+++..++.... ...+.+.++++++.+... ..+.++.+.|.++|..
T Consensus 206 ev~~~f~~~s~~-~~~ls~~~L~~Fl~~~q~e~~~~~~~ae~ii~~~e~~k~~~~~~~l~ldgF~~yL~S 274 (746)
T KOG0169|consen 206 EVYFLFVQYSHG-KEYLSTDDLLRFLEEEQGEDGATLDEAEEIIERYEPSKEFRRHGLLSLDGFTRYLFS 274 (746)
T ss_pred hHHHHHHHHhCC-CCccCHHHHHHHHHHhcccccccHHHHHHHHHHhhhhhhccccceecHHHHHHHhcC
Confidence 688888888655 78999999999998774 367888888898887533 3466999999998865
No 143
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=96.99 E-value=0.0027 Score=63.81 Aligned_cols=66 Identities=21% Similarity=0.206 Sum_probs=54.9
Q ss_pred HHHHHHhhhcCCCCCceeHHHHHHHHHhhcc---CcchhHHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 008641 429 LSDEIFGFIDVDKNGSITFKQFLYASAHVMK---LPLFWQACELAFAECDPDGNGFISENQLEVTIRPA 494 (558)
Q Consensus 429 ~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~---~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~ 494 (558)
.++.+|+.+|.|++|.|+.+||..++..+.. .....+.+..+-+.+|.|+||.|+..||.++.+-.
T Consensus 548 ~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFrlv 616 (631)
T KOG0377|consen 548 SLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAFRLV 616 (631)
T ss_pred hHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHhhh
Confidence 4788999999999999999999988765543 33346778888899999999999999998887643
No 144
>KOG0831 consensus Acyl-CoA:diacylglycerol acyltransferase (DGAT) [Lipid transport and metabolism]
Probab=96.83 E-value=0.068 Score=52.48 Aligned_cols=138 Identities=12% Similarity=0.074 Sum_probs=82.9
Q ss_pred ceeeccccCCCCHHHHHHHhcceEEEecCCccchHHHHHHHHHHHhcCCCCeEEEeeCceec-----CCCc--ccccccc
Q 008641 199 TIVASESHDSIPFVGTIIRAMQVIYVDRFSQSSRKNAVSEIKRKASCDRFPRVLLFPEGTTT-----NGKF--LISFQLG 271 (558)
Q Consensus 199 ~~v~k~~l~~~p~~g~~~~~~g~i~v~r~~~~~~~~~~~~~~~~l~~~~~~~l~iFPEGt~s-----~~~~--ll~Fk~G 271 (558)
..++....+..|+++.+...+|.+.+.|.+ +.-+..+..+|+ +++|=.-|.-- .|.. .++=++|
T Consensus 138 ~l~tl~~~F~~P~~Re~l~~~Gl~svSk~s-------~~~~Ls~~~~Gn--av~IVvGGAqEaL~s~PG~~~L~Lk~RkG 208 (334)
T KOG0831|consen 138 KLMTLSGQFYTPFLREYLMSLGLCSVSRES-------IEYLLSKKGKGN--AVVIVVGGAQEALDSHPGKNTLTLKNRKG 208 (334)
T ss_pred HHcccccceeccHHHHHHHHcCCccccHHH-------HHHHhccCCCCC--EEEEEeCchHHHHHhCCCCceEEEecccc
Confidence 557778889999999999999988886553 333333333345 88888877642 2322 3444566
Q ss_pred ----cccCCCceeEEEEEccCCCCCCCC-CCccHHHH-----------------------HHHHhccccceEEEEEeccc
Q 008641 272 ----AFIPAYPIQPVIVRYPHVHFDQSW-GDVSLGKL-----------------------MFRMFTQFHNFMEVEYLPVV 323 (558)
Q Consensus 272 ----af~~~~pI~Pv~i~y~~~~~~~~w-~~~~~~~~-----------------------~~~~~~~~~~~~~v~~l~pi 323 (558)
|+..|.+++|+.--+....+...- +.++.+.. .+.-+-++...+.+.+|+|+
T Consensus 209 FVklAl~tGs~LVP~~sFGE~di~~q~~np~~s~lr~~Q~~~k~~~gf~~~~f~grg~~~~~~gllP~r~pi~~VVG~Pi 288 (334)
T KOG0831|consen 209 FVKLALQTGASLVPVFSFGENDVYKQVENPKGSRLRKFQEWFKKIFGFTPPIFYGRGFFQYTFGLLPFRRPITTVVGEPI 288 (334)
T ss_pred HHHHHHHhCCCcCceeecccceeeeeecCCCcchhHHHHHHHHHhcCcccceEecccccccccccccccCcceeEecCcc
Confidence 888999999998766443222110 11111110 01112233556778889999
Q ss_pred CCCcccccCHHHHHHHHHHHHH
Q 008641 324 FPSDNQKENALRFAERTSHAMA 345 (558)
Q Consensus 324 ~~~~~~~~~~~~~~~~v~~~i~ 345 (558)
+....+..+.++..+.-...|.
T Consensus 289 ~v~k~~~Pt~e~id~~H~~y~~ 310 (334)
T KOG0831|consen 289 PVPKTENPTQEQIDKYHGLYID 310 (334)
T ss_pred CCccCcCCCHHHHHHHHHHHHH
Confidence 9876555665555554444333
No 145
>PF03982 DAGAT: Diacylglycerol acyltransferase ; InterPro: IPR007130 The terminal step of triacylglycerol (TAG) formation is catalysed by the enzyme diacylglycerol acyltransferase (DAGAT) [, ].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups
Probab=96.82 E-value=0.011 Score=58.72 Aligned_cols=146 Identities=14% Similarity=0.124 Sum_probs=85.3
Q ss_pred eeccccCCCCHHHHHHHhcceEEEecCCccchHHHHHHHHHHHhcCC-CCeEEEeeCceec-----CCCcc--cccccc-
Q 008641 201 VASESHDSIPFVGTIIRAMQVIYVDRFSQSSRKNAVSEIKRKASCDR-FPRVLLFPEGTTT-----NGKFL--ISFQLG- 271 (558)
Q Consensus 201 v~k~~l~~~p~~g~~~~~~g~i~v~r~~~~~~~~~~~~~~~~l~~~~-~~~l~iFPEGt~s-----~~~~l--l~Fk~G- 271 (558)
.+-..++.+|+++.++..+|.+.++|.+- ...+++++ +.+|+|.|-|..- .+... ++=++|
T Consensus 102 ~tl~~~f~~P~~R~~~~~~G~~~~sr~s~----------~~~L~~~~~G~~v~ivpGG~~E~l~~~p~~~~l~lk~RkGF 171 (297)
T PF03982_consen 102 LTLSVNFRIPFFRDFLLWLGAVSASRESI----------RYLLSRGGSGNAVVIVPGGAAEALLAHPGRERLYLKNRKGF 171 (297)
T ss_pred EEeccceeccccchhhhhccccccccccc----------ceeecccCCCceeeeccCcHHHHhhcCCCceEEEECCcchH
Confidence 44446789999999999999999988762 22333322 1379999988753 33332 344566
Q ss_pred ---cccCCCceeEEEEEccCCCCCCCC-CCccHH----HHHHHH-------------h-------ccccceEEEEEeccc
Q 008641 272 ---AFIPAYPIQPVIVRYPHVHFDQSW-GDVSLG----KLMFRM-------------F-------TQFHNFMEVEYLPVV 323 (558)
Q Consensus 272 ---af~~~~pI~Pv~i~y~~~~~~~~w-~~~~~~----~~~~~~-------------~-------~~~~~~~~v~~l~pi 323 (558)
|.+.|+|||||.--+....+...- ..++.+ ..+.+. + .+.+..+.+.+|+||
T Consensus 172 vklAl~~Ga~LVPv~~FGE~d~~~~~~~~~~~~~r~~q~~~~~~~g~~~~~f~Grg~f~~~~~gllP~r~pi~~VVG~PI 251 (297)
T PF03982_consen 172 VKLALQHGAPLVPVYSFGENDLYDQVQNPPGSWLRRFQRWLKKKFGFSLPLFWGRGIFPSYSFGLLPYRRPITTVVGKPI 251 (297)
T ss_pred HHhHHHcCCcEEeEEEeCChhheeeccCCchhHHHHHHHHHHHHcCcceeeeecccccCCCcccccccCCceEEEeecee
Confidence 777999999999988776544211 111111 011110 1 123567888999999
Q ss_pred CCCcccccCHH---HHHHHHHHHHHHhcCCcccCCc
Q 008641 324 FPSDNQKENAL---RFAERTSHAMASALNAVQTSHA 356 (558)
Q Consensus 324 ~~~~~~~~~~~---~~~~~v~~~i~~~l~~~~~~~~ 356 (558)
+....++.+.+ ++.++--+++.+..+.....+.
T Consensus 252 ~v~~~~~Pt~e~Vd~~H~~Y~~~L~~LFd~~K~~~g 287 (297)
T PF03982_consen 252 PVPKIENPTQEDVDKLHARYIEALRELFDKHKAKYG 287 (297)
T ss_pred cccCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 97654443433 3333344444444433333333
No 146
>TIGR02207 lipid_A_htrB lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase. This model represents a narrow clade of acyltransferases, nearly all of which transfer a lauroyl group to KDO2-lipid IV-A, a lipid A precursor; these proteins are termed lipid A biosynthesis lauroyl acyltransferase, HtrB. An exception is a closely related paralog of E. coli HtrB, LpxP, which acts in cold shock conditions by transferring a palmitoleoyl rather than lauroyl group to the lipid A precursor. Members of this family are homologous to the family of acyltransferases responsible for the next step in lipid A biosynthesis.
Probab=96.77 E-value=0.15 Score=51.20 Aligned_cols=162 Identities=14% Similarity=0.178 Sum_probs=98.6
Q ss_pred EEEEccccCC-----CCCCCEEEeCCCCchhHHHHhhhc-ccce-eeccccCCCCHHHHHHHh----cceEEEecCCccc
Q 008641 163 WIRRKGKPAP-----RQIAPIVVSNHISYIEPIFFFYEL-FPTI-VASESHDSIPFVGTIIRA----MQVIYVDRFSQSS 231 (558)
Q Consensus 163 ~~~~~g~~~~-----~~~~~iivsNH~S~~D~~~l~~~~-~p~~-v~k~~l~~~p~~g~~~~~----~g~i~v~r~~~~~ 231 (558)
++.+.|.+.. ...|+|+++-|.+.|+........ .|.. |.+. .+.|.+..++.. .|.-.+.+
T Consensus 103 ~v~i~g~e~l~~a~~~gkgvI~lt~H~GnwE~~~~~~~~~~~~~~vyr~--~~n~~~d~l~~~~R~~~g~~~i~~----- 175 (303)
T TIGR02207 103 WMQIEGLEHLQRAQKQGRGVLLVGVHFLTLELGARIFGQQQPGIGVYRP--HNNPLFDWIQTRGRLRSNKAMIDR----- 175 (303)
T ss_pred cEEEECHHHHHHHHhcCCCEEEEecchhHHHHHHHHHHccCCCeEEEeC--CCCHHHHHHHHHHHHhcCCcccCc-----
Confidence 3566776542 356789999999999975443332 2433 3332 245766665532 23222321
Q ss_pred hHHHHHHHHHHHhcCCCCeEEEeeCceecC-CCccccc--------ccc----cccCCCceeEEEEEccCCCCCCCCCCc
Q 008641 232 RKNAVSEIKRKASCDRFPRVLLFPEGTTTN-GKFLISF--------QLG----AFIPAYPIQPVIVRYPHVHFDQSWGDV 298 (558)
Q Consensus 232 ~~~~~~~~~~~l~~~~~~~l~iFPEGt~s~-~~~ll~F--------k~G----af~~~~pI~Pv~i~y~~~~~~~~w~~~ 298 (558)
..++.+.+.+++|+ .|++-+--.-+. ++...+| -.| |...++||+|+.+.....
T Consensus 176 --~~~r~i~~~Lk~g~--~v~il~Dq~~~~~~g~~v~FfG~~~a~~~~g~a~LA~~~~apvip~~~~r~~~--------- 242 (303)
T TIGR02207 176 --KDLRGMIKALKNGE--RIWYAPDHDYGRKSSVFVPFFAVPDAATTTGTSILARLSKCAVVPFTPRRNED--------- 242 (303)
T ss_pred --ccHHHHHHHHhCCC--eEEEeCCCCCCCCCcEEeCCCCCCcchhHHHHHHHHHHhCCeEEEEEEEEeCC---------
Confidence 12566888899998 888876544322 2233444 223 334899999999865432
Q ss_pred cHHHHHHHHhccccceEEEEEecccCCCcccccCHHHHHHHHHHHHHHhcCCcccCCchhh
Q 008641 299 SLGKLMFRMFTQFHNFMEVEYLPVVFPSDNQKENALRFAERTSHAMASALNAVQTSHAYGD 359 (558)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~v~~l~pi~~~~~~~~~~~~~~~~v~~~i~~~l~~~~~~~~~~d 359 (558)
....+|++.||++. ...++..+.++++-+.+.+.....+.+|-|-.
T Consensus 243 -------------~~~~~i~~~~~~~~--~~~~~~~~~t~~~~~~lE~~Ir~~P~QW~W~h 288 (303)
T TIGR02207 243 -------------GSGYRLKIDPPLDD--FPGDDEIAAAARMNKIVEKMIMRAPEQYMWLH 288 (303)
T ss_pred -------------CCeEEEEEeCCCCC--CCCCCHHHHHHHHHHHHHHHHHcCcHHHHHHH
Confidence 11357788888765 23456777888888888888777777776544
No 147
>PRK06553 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=96.72 E-value=0.15 Score=51.36 Aligned_cols=161 Identities=9% Similarity=0.025 Sum_probs=97.3
Q ss_pred EEEccccC-----CCCCCCEEEeCCCCchhHHHHhhhcc--cc-eeeccccCCCCHHHHHHHhc----ceEEEecCCccc
Q 008641 164 IRRKGKPA-----PRQIAPIVVSNHISYIEPIFFFYELF--PT-IVASESHDSIPFVGTIIRAM----QVIYVDRFSQSS 231 (558)
Q Consensus 164 ~~~~g~~~-----~~~~~~iivsNH~S~~D~~~l~~~~~--p~-~v~k~~l~~~p~~g~~~~~~----g~i~v~r~~~~~ 231 (558)
+.+.|.+. ....|+|+++-|.+.||......... |. .+.+. .+.|.+..++... |.-.+..
T Consensus 117 ~~~~g~e~l~~a~a~gkgvIllt~H~GnWE~~~~~l~~~~~~~~~vyr~--~~n~~~d~~i~~~R~~~g~~~i~~----- 189 (308)
T PRK06553 117 VEVRGIEIFERLRDDGKPALIFTAHLGNWELLAIAAAAFGLDVTVLFRP--PNNPYAARKVLEARRTTMGGLVPS----- 189 (308)
T ss_pred eEecCHHHHHHHHhcCCCEEEEeeCchHHHHHHHHHHHcCCceEEEEec--CCChHHHHHHHHHHHHcCCCcccC-----
Confidence 45566543 13568899999999999765443322 33 34333 3457776655433 2122211
Q ss_pred hHHHHHHHHHHHhcCCCCeEEEeeCceecCCCcccccc-------cc----cccCCCceeEEEEEccCCCCCCCCCCccH
Q 008641 232 RKNAVSEIKRKASCDRFPRVLLFPEGTTTNGKFLISFQ-------LG----AFIPAYPIQPVIVRYPHVHFDQSWGDVSL 300 (558)
Q Consensus 232 ~~~~~~~~~~~l~~~~~~~l~iFPEGt~s~~~~ll~Fk-------~G----af~~~~pI~Pv~i~y~~~~~~~~w~~~~~ 300 (558)
....+..+.+.+++|+ .+++.|--.-+ ++...+|- +| |...++||+|+.+....
T Consensus 190 ~~~~~r~l~r~Lk~g~--~v~il~DQ~~~-~gv~v~FFG~~a~t~~~~a~LA~~~~apVvp~~~~R~~------------ 254 (308)
T PRK06553 190 GAGAAFALAGVLERGG--HVGMLVDQKFT-RGVEVTFFGRPVKTNPLLAKLARQYDCPVHGARCIRLP------------ 254 (308)
T ss_pred CChHHHHHHHHHHcCC--eEEEEecccCC-CCceeccCCCcCCCCchHHHHHHHHCCCEEEEEEEEcC------------
Confidence 2345778888899998 88888655432 23334542 22 33479999999986543
Q ss_pred HHHHHHHhccccceEEEEEecccCCCcc--cccCHHHHHHHHHHHHHHhcCCcccCCch
Q 008641 301 GKLMFRMFTQFHNFMEVEYLPVVFPSDN--QKENALRFAERTSHAMASALNAVQTSHAY 357 (558)
Q Consensus 301 ~~~~~~~~~~~~~~~~v~~l~pi~~~~~--~~~~~~~~~~~v~~~i~~~l~~~~~~~~~ 357 (558)
.+..+|++.||++.... ..++..+.++++-+.+.+.....+.+|-|
T Consensus 255 -----------~g~y~i~~~~~~~~~~~~~~~~d~~~~t~~~n~~lE~~Ir~~PeQw~W 302 (308)
T PRK06553 255 -----------GGRFRLELTERVELPRDADGQIDVQATMQALTDVVEGWVREYPGQWLW 302 (308)
T ss_pred -----------CCeEEEEEecCCCCCCCCCccccHHHHHHHHHHHHHHHHHcChHhhcc
Confidence 12357888888875322 23456677777777777776666666644
No 148
>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]
Probab=96.69 E-value=0.0038 Score=64.22 Aligned_cols=71 Identities=21% Similarity=0.345 Sum_probs=60.8
Q ss_pred ccccChHHHHHHHHHHHhhCCCCCCcccHHHHHHHhcc-------CCcHHHHHHHhhhcCCCCCceeHHHHHHHHHhhc
Q 008641 387 IFHISSLEAVNFLEKFLSMNPDPSGCVKLLDFLSVLRL-------KTCPLSDEIFGFIDVDKNGSITFKQFLYASAHVM 458 (558)
Q Consensus 387 ~~~lt~~~~~~~~~~F~~~D~d~~G~Is~~ef~~~l~~-------~~~~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~ 458 (558)
...+|++++..+++.|..+| |++|+++..|+..+++. ...++++++....+.|.+|.|+|+||+..+..+.
T Consensus 10 ~~~~tq~El~~l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~~g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~~~l~ 87 (627)
T KOG0046|consen 10 QSQLTQEELRELKEKFNKLD-DQKGYVTVYELPDAFKKAKLPLGYFVREEIKEILGEVGVDADGRVEFEEFVGIFLNLK 87 (627)
T ss_pred cccccHHHHHHHHHHHHhhc-CCCCeeehHHhHHHHHHhcccccchhHHHHHHHHhccCCCcCCccCHHHHHHHHHhhh
Confidence 34689999999999999999 99999999999777632 2245899999999999999999999999766554
No 149
>PRK06946 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=96.68 E-value=0.21 Score=49.90 Aligned_cols=163 Identities=12% Similarity=0.052 Sum_probs=99.4
Q ss_pred EEEEccccC---CCCCCCEEEeCCCCchhHHHHhhh---ccc-ceeeccccCCCCHHHHHHHhc----ceEEEecCCccc
Q 008641 163 WIRRKGKPA---PRQIAPIVVSNHISYIEPIFFFYE---LFP-TIVASESHDSIPFVGTIIRAM----QVIYVDRFSQSS 231 (558)
Q Consensus 163 ~~~~~g~~~---~~~~~~iivsNH~S~~D~~~l~~~---~~p-~~v~k~~l~~~p~~g~~~~~~----g~i~v~r~~~~~ 231 (558)
++.+.|.++ ....|+|+++-|.+.||....... ..+ ..+.+. .+.|.+..++... |.-.+.
T Consensus 94 ~~~~~g~~~~~~~~gkgvI~~t~H~GnWEl~~~~~~~~~~~~~~~vyr~--~~n~~~d~~~~~~R~~~g~~~i~------ 165 (293)
T PRK06946 94 LVQVDSAIDLTDPDGPPTIFLGLHFVGIEAGSIWLNYSLRRRVGSLYTP--MSNPLLDAIAKAARGRFGAEMVS------ 165 (293)
T ss_pred eEEEECHHHHHhcCCCCEEEEecchhHHHHHHHHHHhcccCCceEEeeC--CCCHHHHHHHHHHHHhcCCCccC------
Confidence 356666543 245678999999999997654422 123 234433 4557777665443 322231
Q ss_pred hHHHHHHHHHHHhcCCCCeEEEeeCceec-CCCcccccc-------cc----cccCCCceeEEEEEccCCCCCCCCCCcc
Q 008641 232 RKNAVSEIKRKASCDRFPRVLLFPEGTTT-NGKFLISFQ-------LG----AFIPAYPIQPVIVRYPHVHFDQSWGDVS 299 (558)
Q Consensus 232 ~~~~~~~~~~~l~~~~~~~l~iFPEGt~s-~~~~ll~Fk-------~G----af~~~~pI~Pv~i~y~~~~~~~~w~~~~ 299 (558)
....++.+.+.+++|+ .+.+-|.-..+ .++...+|- +| |...++||+|+.+.....
T Consensus 166 ~~~~~r~~~~~Lk~g~--~v~~l~Dq~~~~~~gv~v~FFG~~a~t~~~~a~LA~~~~a~vvp~~~~r~~~---------- 233 (293)
T PRK06946 166 RADSARQVLRWLRDGK--PVMLGADMDFGLRDSTFVPFFGVPACTLTAVSRLARTGGAQVVPFITEVLPD---------- 233 (293)
T ss_pred CCchHHHHHHHHhCCC--eEEEeCCCCCCCCCCeEeCCCCCCcHHhHHHHHHHHhcCCeEEEEEEEEeCC----------
Confidence 1345777888888898 88888765543 233344552 22 345899999998754321
Q ss_pred HHHHHHHHhccccceEEEEEecccCCCcccccCHHHHHHHHHHHHHHhcCCcccCCchhh
Q 008641 300 LGKLMFRMFTQFHNFMEVEYLPVVFPSDNQKENALRFAERTSHAMASALNAVQTSHAYGD 359 (558)
Q Consensus 300 ~~~~~~~~~~~~~~~~~v~~l~pi~~~~~~~~~~~~~~~~v~~~i~~~l~~~~~~~~~~d 359 (558)
....++++.||+... ..++..+.++++-+.+.+.....+.+|=|-.
T Consensus 234 ------------~~~~~~~~~~~~~~~--~~~~~~~~t~~~n~~lE~~Ir~~PeQw~W~H 279 (293)
T PRK06946 234 ------------YKGYRLRVFKPWENY--PTGDDDLDARRMNAFLEEQIRLMPEQYYWVH 279 (293)
T ss_pred ------------CCeEEEEEeCCCcCC--CCCCHHHHHHHHHHHHHHHHHcCcHhHHhHH
Confidence 112467778888752 2355666777777777777777677765433
No 150
>PRK06860 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=96.66 E-value=0.12 Score=52.08 Aligned_cols=162 Identities=14% Similarity=0.162 Sum_probs=99.7
Q ss_pred EEEEccccC-----CCCCCCEEEeCCCCchhHHHHhhhc-ccce-eeccccCCCCHHHHHHHh----cceEEEecCCccc
Q 008641 163 WIRRKGKPA-----PRQIAPIVVSNHISYIEPIFFFYEL-FPTI-VASESHDSIPFVGTIIRA----MQVIYVDRFSQSS 231 (558)
Q Consensus 163 ~~~~~g~~~-----~~~~~~iivsNH~S~~D~~~l~~~~-~p~~-v~k~~l~~~p~~g~~~~~----~g~i~v~r~~~~~ 231 (558)
++.++|.+. ...+|+|+++-|.+.||.+...... .|.. |.+. .+.|.+..++.. .|...+.+
T Consensus 109 ~v~i~g~e~l~~a~~~gkgvI~lt~H~GnwE~~~~~~~~~~~~~~vyr~--~~n~~~d~~~~~~R~~~g~~~i~~----- 181 (309)
T PRK06860 109 WTEVEGLEHIREVQAQGRGVLLVGVHFLTLELGARIFGMHNPGIGVYRP--NDNPLYDWLQTWGRLRSNKSMLDR----- 181 (309)
T ss_pred eEEEeCHHHHHHHHhCCCCEEEEecchhHHHHHHHHHHccCCCeEEeeC--CCCHHHHHHHHHHHhhcCCcCcCc-----
Confidence 366777654 2356889999999999975543332 2432 3332 345666655432 33333321
Q ss_pred hHHHHHHHHHHHhcCCCCeEEEeeCceecCC-Cccccc--------ccc----cccCCCceeEEEEEccCCCCCCCCCCc
Q 008641 232 RKNAVSEIKRKASCDRFPRVLLFPEGTTTNG-KFLISF--------QLG----AFIPAYPIQPVIVRYPHVHFDQSWGDV 298 (558)
Q Consensus 232 ~~~~~~~~~~~l~~~~~~~l~iFPEGt~s~~-~~ll~F--------k~G----af~~~~pI~Pv~i~y~~~~~~~~w~~~ 298 (558)
+.++.+.+.+++|+ .+++-|--....+ +...+| -+| |...++||+|+.+.....
T Consensus 182 --~~~r~~~k~Lk~g~--~v~il~Dq~~~~~~gv~v~FfG~~~a~t~~g~a~LA~~~~apvvp~~~~R~~~--------- 248 (309)
T PRK06860 182 --KDLKGMIKALKKGE--RIWYAPDHDYGPRSSVFVPFFAVEQAATTTGTWMLARMSKAAVIPFVPRRKPD--------- 248 (309)
T ss_pred --ccHHHHHHHHhcCC--eEEEeCCCCCCCCCCEEecCCCCCchhhHHHHHHHHHHhCCeEEEEEEEEeCC---------
Confidence 12566788888998 8888765543322 333444 222 334899999999865432
Q ss_pred cHHHHHHHHhccccceEEEEEecccCCCcccccCHHHHHHHHHHHHHHhcCCcccCCchhh
Q 008641 299 SLGKLMFRMFTQFHNFMEVEYLPVVFPSDNQKENALRFAERTSHAMASALNAVQTSHAYGD 359 (558)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~v~~l~pi~~~~~~~~~~~~~~~~v~~~i~~~l~~~~~~~~~~d 359 (558)
....+|++.+|++.. ..++..+.++.+-+.+.+.....+.+|-|-.
T Consensus 249 -------------~~~~~i~~~~~~~~~--~~~d~~~~t~~~n~~lE~~Ir~~PeQw~W~h 294 (309)
T PRK06860 249 -------------GKGYELIILPPEDSP--PLDDAEATAAWMNKVVEKCILMAPEQYMWLH 294 (309)
T ss_pred -------------CCeEEEEEecCCCCC--CCCCHHHHHHHHHHHHHHHHHcCchHHHHHH
Confidence 113578888887753 2467778888888888888777777775543
No 151
>TIGR02208 lipid_A_msbB lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase. This family consists of MsbB in E. coli and closely related proteins in other species. MsbB is homologous to HtrB (TIGR02207) and acts immediately after it in the biosynthesis of KDO-2 lipid A (also called Re LPS and Re endotoxin). These two enzymes act after creation of KDO-2 lipid IV-A by addition of the KDO sugars.
Probab=96.59 E-value=0.34 Score=48.73 Aligned_cols=162 Identities=11% Similarity=0.086 Sum_probs=99.0
Q ss_pred EEEccccC-----CCCCCCEEEeCCCCchhHHHHhhhc--ccceeeccccCCCCHHHHHHHhc----ceEEEecCCccch
Q 008641 164 IRRKGKPA-----PRQIAPIVVSNHISYIEPIFFFYEL--FPTIVASESHDSIPFVGTIIRAM----QVIYVDRFSQSSR 232 (558)
Q Consensus 164 ~~~~g~~~-----~~~~~~iivsNH~S~~D~~~l~~~~--~p~~v~k~~l~~~p~~g~~~~~~----g~i~v~r~~~~~~ 232 (558)
+.++|.+. ....|+|+++=|...+|........ .|..+.-... +.|.+..++... |.-.+. .
T Consensus 106 ~~i~g~e~l~~~~~~gkgvi~~t~H~gnwE~~~~~~~~~~~~~~~v~r~~-~n~~~d~~~~~~R~~~g~~~i~------~ 178 (305)
T TIGR02208 106 VNLMGLEHIEAAQAAGKPVIFLVPHGWAIDYAGLRLASQGLPMVTMFNNH-KNPLFDWLWNRVRSRFGGHVYA------R 178 (305)
T ss_pred eEEeCHHHHHHHHhCCCCEEEEecchhHHHHHHHHHHhcCCCceEEeeCC-CCHHHHHHHHHHHhcCCCceec------C
Confidence 56667543 2356889999999999965444332 2433332333 347776655433 222221 1
Q ss_pred HHHHHHHHHHHhcCCCCeEEEeeCceec-CCCccccccc-------c----cccCCCceeEEEEEccCCCCCCCCCCccH
Q 008641 233 KNAVSEIKRKASCDRFPRVLLFPEGTTT-NGKFLISFQL-------G----AFIPAYPIQPVIVRYPHVHFDQSWGDVSL 300 (558)
Q Consensus 233 ~~~~~~~~~~l~~~~~~~l~iFPEGt~s-~~~~ll~Fk~-------G----af~~~~pI~Pv~i~y~~~~~~~~w~~~~~ 300 (558)
...++.+.+.+++|+ .|++-+--..+ +++...+|-. | |...++||+|+.+.....
T Consensus 179 ~~~~r~i~~aLk~g~--~v~il~Dq~~~~~~gv~v~FfG~~a~t~~~~a~LA~~~~apvv~~~~~r~~~----------- 245 (305)
T TIGR02208 179 EAGIKALLASLKRGE--SGYYLPDEDHGPEQSVFVPFFATYKATLPVVGRLAKAGNAQVVPVFPGYNQV----------- 245 (305)
T ss_pred hhhHHHHHHHHhCCC--eEEEeCCCCCCCCCCeEeccCCCcchhHHHHHHHHHhcCCeEEEEEEEEECC-----------
Confidence 355778888999998 88887655543 3333455522 1 345899999999854321
Q ss_pred HHHHHHHhccccceEEEEEecccCCCcccccCHHHHHHHHHHHHHHhcCCcccCCchh
Q 008641 301 GKLMFRMFTQFHNFMEVEYLPVVFPSDNQKENALRFAERTSHAMASALNAVQTSHAYG 358 (558)
Q Consensus 301 ~~~~~~~~~~~~~~~~v~~l~pi~~~~~~~~~~~~~~~~v~~~i~~~l~~~~~~~~~~ 358 (558)
....+|++.||++.. ..++..+.++++-+.+.+.....+.+|=|-
T Consensus 246 -----------~~~~~i~~~~~~~~~--~~~~~~~~t~~~n~~lE~~Ir~~PeQw~W~ 290 (305)
T TIGR02208 246 -----------TGKFELTVRPAMATE--LSVDPEQEARAMNKEVEQFILPYPEQYMWI 290 (305)
T ss_pred -----------CCeEEEEEecCCCCC--CCCCHHHHHHHHHHHHHHHHHcCchHHHHH
Confidence 123577887877642 235777788888778877777777776543
No 152
>PRK08734 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=96.56 E-value=0.36 Score=48.55 Aligned_cols=163 Identities=13% Similarity=0.019 Sum_probs=98.4
Q ss_pred EEEccccCC-----CCCCCEEEeCCCCchhHHHHhhhc-ccce-eeccccCCCCHHHHHHHh----cceEEEecCCccch
Q 008641 164 IRRKGKPAP-----RQIAPIVVSNHISYIEPIFFFYEL-FPTI-VASESHDSIPFVGTIIRA----MQVIYVDRFSQSSR 232 (558)
Q Consensus 164 ~~~~g~~~~-----~~~~~iivsNH~S~~D~~~l~~~~-~p~~-v~k~~l~~~p~~g~~~~~----~g~i~v~r~~~~~~ 232 (558)
+.++|.+.. ...|+|+++-|.+.||........ .|.. |.+. .+.|.+..++.. .|.-.+. . .
T Consensus 97 ~~~~g~e~l~~~~~~gkgvI~lt~H~GnwE~~~~~~~~~~~~~~vyr~--~~n~~~d~~~~~~R~~~g~~~i~-~----~ 169 (305)
T PRK08734 97 RQRHGQELYDAALASGRGVIVAAPHFGNWELLNQWLSERGPIAIVYRP--PESEAVDGFLQLVRGGDNVRQVR-A----E 169 (305)
T ss_pred EEecCHHHHHHHHHcCCCEEEEccccchHHHHHHHHHccCCceEEEeC--CCCHHHHHHHHHHhccCCCeeec-C----C
Confidence 456665542 356789999999999976543332 3433 3332 345777665543 3333331 1 1
Q ss_pred HHHHHHHHHHHhcCCCCeEEEeeCceec-CCCcccccc-------cc----cccCCCceeEEEEEccCCCCCCCCCCccH
Q 008641 233 KNAVSEIKRKASCDRFPRVLLFPEGTTT-NGKFLISFQ-------LG----AFIPAYPIQPVIVRYPHVHFDQSWGDVSL 300 (558)
Q Consensus 233 ~~~~~~~~~~l~~~~~~~l~iFPEGt~s-~~~~ll~Fk-------~G----af~~~~pI~Pv~i~y~~~~~~~~w~~~~~ 300 (558)
...+..+.+.+++|+ .|++-+--... +++...+|- +| |...++||+|+.+.....
T Consensus 170 ~~~~r~li~~Lk~g~--~v~~l~Dq~~~~~~gv~v~FfG~~a~t~~g~a~LA~~~~apVvp~~~~R~~~----------- 236 (305)
T PRK08734 170 GPAVRQLFKVLKDGG--AVGILPDQQPKMGDGVFAPFFGIPALTMTLVNRLAERTGATVLYGWCERIGP----------- 236 (305)
T ss_pred chhHHHHHHHHhcCC--eEEEeCCCCCCCCCCeEeccCCCccchhhHHHHHHHHhCCeEEEEEEEEcCC-----------
Confidence 345778888899998 88887655433 223334552 22 334899999999854421
Q ss_pred HHHHHHHhccccceEEEEEecccCCCcccccCHHHHHHHHHHHHHHhcCCcccCCchhh
Q 008641 301 GKLMFRMFTQFHNFMEVEYLPVVFPSDNQKENALRFAERTSHAMASALNAVQTSHAYGD 359 (558)
Q Consensus 301 ~~~~~~~~~~~~~~~~v~~l~pi~~~~~~~~~~~~~~~~v~~~i~~~l~~~~~~~~~~d 359 (558)
....++.+.++++. ...++..+.++++-+.+.+.....+.+|-|-.
T Consensus 237 -----------~~~y~~~~~~~~~~--~~~~~~~~~~~~~n~~lE~~Ir~~PeQw~W~h 282 (305)
T PRK08734 237 -----------DLEFALHVQPADPA--VADPDPLRAATALNAGIERIARRDPAQYQWTY 282 (305)
T ss_pred -----------CCcEEEEEecCCCC--CCCCCHHHHHHHHHHHHHHHHHcCcHHhhhhh
Confidence 12356777776543 22456777777777777777777777775543
No 153
>KOG4065 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.53 E-value=0.0075 Score=49.23 Aligned_cols=58 Identities=24% Similarity=0.288 Sum_probs=41.3
Q ss_pred HHhhhhCCCCCCcccHHHHHHHHHHhC------C----CCcHHHH----HHHHHHhCCCCCCceeHHHHHHH
Q 008641 469 LAFAECDPDGNGFISENQLEVTIRPAI------P----DLNKYEI----DSLFRLFDSDGDGRVSRDDFICC 526 (558)
Q Consensus 469 ~~F~~~D~d~~G~Is~~E~~~~l~~~~------~----~~~~~~i----~~lf~~~D~d~dG~Is~~eF~~~ 526 (558)
.-|++.|.|++|.|+--|+..++.... . -.++.|+ +.+.+.-|.|+||.|+|.||.+.
T Consensus 71 HYF~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYgEflK~ 142 (144)
T KOG4065|consen 71 HYFSMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYGEFLKR 142 (144)
T ss_pred hhhhhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHHHHHhh
Confidence 457778888888888888877776432 1 1245554 44556678999999999999764
No 154
>PRK05906 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=96.45 E-value=0.086 Score=55.61 Aligned_cols=154 Identities=13% Similarity=0.120 Sum_probs=94.5
Q ss_pred CCCCCEEEeCCCCchhHHHHhhh-ccc-ceeeccccCCCCHHHHHHHhc----ceEEEecCCccchHHHHHHHHHHHhcC
Q 008641 173 RQIAPIVVSNHISYIEPIFFFYE-LFP-TIVASESHDSIPFVGTIIRAM----QVIYVDRFSQSSRKNAVSEIKRKASCD 246 (558)
Q Consensus 173 ~~~~~iivsNH~S~~D~~~l~~~-~~p-~~v~k~~l~~~p~~g~~~~~~----g~i~v~r~~~~~~~~~~~~~~~~l~~~ 246 (558)
...|+|+++-|.+.||....... ..| ..|.+. .+.|.+..++... |.-.+.. .+.++.+.+.+++|
T Consensus 138 ~gkGvIllt~H~GNWEl~~~~l~~~~p~~~vyRp--~kNp~ld~li~~~R~r~G~~lI~~------~~giR~liraLk~G 209 (454)
T PRK05906 138 EQEGAILFCGHQANWELPFLYITKRYPGLAFAKP--IKNRRLNKKIFSLRESFKGKIVPP------KNGINQALRALHQG 209 (454)
T ss_pred CCCCEEEEeehhhHHHHHHHHHHcCCCeEEEEec--CCCHHHHHHHHHHHHhcCCeeecC------chHHHHHHHHHhcC
Confidence 35688999999999996544222 234 334433 3467776655433 3222321 35677888889999
Q ss_pred CCCeEEEeeCceecCCCcccccc-------cc----cccCCCceeEEEEEccCCCCCCCCCCccHHHHHHHHhccccceE
Q 008641 247 RFPRVLLFPEGTTTNGKFLISFQ-------LG----AFIPAYPIQPVIVRYPHVHFDQSWGDVSLGKLMFRMFTQFHNFM 315 (558)
Q Consensus 247 ~~~~l~iFPEGt~s~~~~ll~Fk-------~G----af~~~~pI~Pv~i~y~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ 315 (558)
+ .+++-|--...+++...+|- +| |...++||+|+.+.-... + .
T Consensus 210 ~--~vgiL~DQ~~~~~Gv~VpFFG~~a~T~tgpA~LA~rtgApVVpv~~~R~~~-----------------------g-y 263 (454)
T PRK05906 210 E--VVGIVGDQALLSSSYSYPLFGSQAFTTTSPALLAYKTGKPVIAVAIYRKPN-----------------------G-Y 263 (454)
T ss_pred C--EEEEEeCCCCCCCceEeCCCCCccchhhHHHHHHHHhCCeEEEEEEEEeCC-----------------------e-E
Confidence 8 88888776644444445652 11 334899999999854321 1 3
Q ss_pred EEEEecccCCCc--ccccCHHHHHHHHHHHHHHhcCCcccCCchhhH
Q 008641 316 EVEYLPVVFPSD--NQKENALRFAERTSHAMASALNAVQTSHAYGDL 360 (558)
Q Consensus 316 ~v~~l~pi~~~~--~~~~~~~~~~~~v~~~i~~~l~~~~~~~~~~d~ 360 (558)
+|++.+|+.+.. ...++..+.++++-+.+.+.....+.+|=|-..
T Consensus 264 ~v~i~~~l~~~~~~~~~~d~~~~tq~~n~~LE~~IR~~PeQWlW~Hk 310 (454)
T PRK05906 264 LVVPSKKFYANKSLPIKESTEQLMDRLMRFLEKGIACKPEQWMWLHK 310 (454)
T ss_pred EEEEEcCccCcccCCcchHHHHHHHHHHHHHHHHHHhChHHhcccHH
Confidence 566666664421 223456677777777777777777877766443
No 155
>PRK08733 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=96.40 E-value=0.3 Score=49.18 Aligned_cols=160 Identities=9% Similarity=0.079 Sum_probs=96.6
Q ss_pred EEEEccccC-----CCCCCCEEEeCCCCchhHHHHhhhc-ccc-eeeccccCCCCHHHHHHHhc----ceEEEecCCccc
Q 008641 163 WIRRKGKPA-----PRQIAPIVVSNHISYIEPIFFFYEL-FPT-IVASESHDSIPFVGTIIRAM----QVIYVDRFSQSS 231 (558)
Q Consensus 163 ~~~~~g~~~-----~~~~~~iivsNH~S~~D~~~l~~~~-~p~-~v~k~~l~~~p~~g~~~~~~----g~i~v~r~~~~~ 231 (558)
++.+.|.+. ...+|+|+++-|...|+........ .|. .|.+. .+.|++..++... |.-.+.
T Consensus 109 ~v~v~g~e~l~~a~~~gkgvI~~t~H~GnWE~~~~~~~~~~~~~~vyr~--~~n~~~d~~i~~~R~~~g~~~i~------ 180 (306)
T PRK08733 109 GVQIEGLEHLQQLQQQGRGVLLVSGHFMTLEMCGRLLCDHVPLAGMYRR--HRNPVFEWAVKRGRLRYATHMFA------ 180 (306)
T ss_pred cEEEeCHHHHHHHHhCCCCEEEEecCchHHHHHHHHHHccCCceEEEeC--CCCHHHHHHHHHHHhhcCCcCcC------
Confidence 356667543 2356889999999999965433332 232 23332 3456666554432 222221
Q ss_pred hHHHHHHHHHHHhcCCCCeEEEeeCceec-CCCcccccc-------cc----cccCCCceeEEEEEccCCCCCCCCCCcc
Q 008641 232 RKNAVSEIKRKASCDRFPRVLLFPEGTTT-NGKFLISFQ-------LG----AFIPAYPIQPVIVRYPHVHFDQSWGDVS 299 (558)
Q Consensus 232 ~~~~~~~~~~~l~~~~~~~l~iFPEGt~s-~~~~ll~Fk-------~G----af~~~~pI~Pv~i~y~~~~~~~~w~~~~ 299 (558)
+..++.+.+.+++|+ .+++-|--... +.+...+|- +| |...++||+|+.+....
T Consensus 181 -~~~~r~~~kaLk~g~--~v~il~Dq~~~~~~gv~v~FfG~~a~t~~g~a~LA~~~~apvvp~~~~r~~----------- 246 (306)
T PRK08733 181 -NEDLRATIKHLKRGG--FLWYAPDQDMRGKDTVFVPFFGHPASTITATHQLARLTGCAVVPYFHRREG----------- 246 (306)
T ss_pred -cccHHHHHHHHhCCC--eEEEeCCCCCCCCCcEEeCCCCCchhHHHHHHHHHHHhCCeEEEEEEEEeC-----------
Confidence 223666788888898 88887654433 223344552 22 33489999999985421
Q ss_pred HHHHHHHHhccccceEEEEEecccCCCcccccCHHHHHHHHHHHHHHhcCCcccCCchhh
Q 008641 300 LGKLMFRMFTQFHNFMEVEYLPVVFPSDNQKENALRFAERTSHAMASALNAVQTSHAYGD 359 (558)
Q Consensus 300 ~~~~~~~~~~~~~~~~~v~~l~pi~~~~~~~~~~~~~~~~v~~~i~~~l~~~~~~~~~~d 359 (558)
+..++++.||+.. ...++..+.++++-+.+.+.....+.+|-|-.
T Consensus 247 -------------~~y~i~i~~~~~~--~~~~~i~~~t~~~~~~lE~~Ir~~P~Qw~W~h 291 (306)
T PRK08733 247 -------------GRYVLKIAPPLAD--FPSDDVIADTTRVNAAIEDMVREAPDQYLWIH 291 (306)
T ss_pred -------------CeEEEEEECCCCC--CCCCCHHHHHHHHHHHHHHHHHcCcHhhHhHH
Confidence 1246777777764 23457777788887788877777777775543
No 156
>PRK08943 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Validated
Probab=96.37 E-value=0.44 Score=48.13 Aligned_cols=162 Identities=10% Similarity=0.083 Sum_probs=98.5
Q ss_pred EEEccccC-----CCCCCCEEEeCCCCchhHHHHhhhc--ccc-eeeccccCCCCHHHHHHHh----cceEEEecCCccc
Q 008641 164 IRRKGKPA-----PRQIAPIVVSNHISYIEPIFFFYEL--FPT-IVASESHDSIPFVGTIIRA----MQVIYVDRFSQSS 231 (558)
Q Consensus 164 ~~~~g~~~-----~~~~~~iivsNH~S~~D~~~l~~~~--~p~-~v~k~~l~~~p~~g~~~~~----~g~i~v~r~~~~~ 231 (558)
+.+.|.+. ....|+|+++=|...|+........ .|. .|.+. .+.|.+..++.. .|.-.+.
T Consensus 115 ~~~~g~e~l~~a~~~gkgvI~~t~H~gnwE~~~~~~~~~~~~~~~vyr~--~~n~~~d~~~~~~R~~~g~~~i~------ 186 (314)
T PRK08943 115 VEWHGLEILEEARANGENVIFLVPHGWAIDIPAMLLASQGQPMAAMFHN--QRNPLFDWLWNRVRRRFGGRLHA------ 186 (314)
T ss_pred EEEECHHHHHHHHhCCCCEEEEEechhHHHHHHHHHHhcCCCccEEEeC--CCCHHHHHHHHHHHhhcCCeeec------
Confidence 56667553 2356889999999999965544432 243 34433 245666665533 2322222
Q ss_pred hHHHHHHHHHHHhcCCCCeEEEeeCceecC-CCcccccc-------cc----cccCCCceeEEEEEccCCCCCCCCCCcc
Q 008641 232 RKNAVSEIKRKASCDRFPRVLLFPEGTTTN-GKFLISFQ-------LG----AFIPAYPIQPVIVRYPHVHFDQSWGDVS 299 (558)
Q Consensus 232 ~~~~~~~~~~~l~~~~~~~l~iFPEGt~s~-~~~ll~Fk-------~G----af~~~~pI~Pv~i~y~~~~~~~~w~~~~ 299 (558)
....+..+.+.+++|+ .|++-+--..+. .+...+|- +| |...++||+|+.+.....
T Consensus 187 ~~~~~r~i~kaLk~g~--~v~il~Dq~~~~~~gv~v~FfG~~a~t~~g~a~LA~k~~apvvp~~~~R~~~---------- 254 (314)
T PRK08943 187 REDGIKPFISSVRQGY--WGYYLPDEDHGPEHSVFVDFFATYKATLPGIGRLAKVCRARVVPLFPVYNGK---------- 254 (314)
T ss_pred CchhHHHHHHHHhCCC--eEEEeCCCCCCCCCCEEeCCCCCchhHhHHHHHHHHHhCCeEEEEEEEEeCC----------
Confidence 1345677888898998 888887665432 23334552 22 334899999999843211
Q ss_pred HHHHHHHHhccccceEEEEEecccCCCcccccCHHHHHHHHHHHHHHhcCCcccCCchhh
Q 008641 300 LGKLMFRMFTQFHNFMEVEYLPVVFPSDNQKENALRFAERTSHAMASALNAVQTSHAYGD 359 (558)
Q Consensus 300 ~~~~~~~~~~~~~~~~~v~~l~pi~~~~~~~~~~~~~~~~v~~~i~~~l~~~~~~~~~~d 359 (558)
.+..+|++.+|++.. ..++..+.++++-+.+.+.....+.+|=|-.
T Consensus 255 ------------~~~~~i~~~~~~~~~--~~~d~~~~t~~~~~~lE~~Ir~~PeQw~W~h 300 (314)
T PRK08943 255 ------------THRLDIEIRPPMDDL--LSADDETIARRMNEEVEQFVGPHPEQYMWIL 300 (314)
T ss_pred ------------CCeEEEEEecCCCCC--CCCCHHHHHHHHHHHHHHHHHcCcHHHHHHH
Confidence 223577888887642 2356777777777777777776677665433
No 157
>PRK08706 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=96.36 E-value=0.34 Score=48.29 Aligned_cols=161 Identities=14% Similarity=0.184 Sum_probs=93.7
Q ss_pred EEEccccC-----CCCCCCEEEeCCCCchhHHHHhhhc-ccc-eeeccccCCCCHHHHHHHhc----ceEEEecCCccch
Q 008641 164 IRRKGKPA-----PRQIAPIVVSNHISYIEPIFFFYEL-FPT-IVASESHDSIPFVGTIIRAM----QVIYVDRFSQSSR 232 (558)
Q Consensus 164 ~~~~g~~~-----~~~~~~iivsNH~S~~D~~~l~~~~-~p~-~v~k~~l~~~p~~g~~~~~~----g~i~v~r~~~~~~ 232 (558)
+.+.|.+. ...+|+|+++-|.+.|+........ .|. .+.+. .+.|.+..++... |...+ -..
T Consensus 90 ~~~~~~e~l~~~~~~gkgvI~~t~H~GnWEl~~~~~~~~~~~~~i~r~--~~n~~~d~~~~~~R~~~g~~~i-----~~~ 162 (289)
T PRK08706 90 VRYRNKHYLDDALAAGEKVIILYPHFTAFEMAVYALNQDVPLISMYSH--QKNKILDEQILKGRNRYHNVFL-----IGR 162 (289)
T ss_pred eEEECHHHHHHHHhCCCCEEEEecchhHHHHHHHHHHccCCCcEEeeC--CCCHHHHHHHHHHHhccCCccc-----ccC
Confidence 56666543 2356889999999999965533332 242 23222 3446565544332 21111 012
Q ss_pred HHHHHHHHHHHh-cCCCCeEEEeeCceec-CCCcccccc-------cc----cccCCCceeEEEEEccCCCCCCCCCCcc
Q 008641 233 KNAVSEIKRKAS-CDRFPRVLLFPEGTTT-NGKFLISFQ-------LG----AFIPAYPIQPVIVRYPHVHFDQSWGDVS 299 (558)
Q Consensus 233 ~~~~~~~~~~l~-~~~~~~l~iFPEGt~s-~~~~ll~Fk-------~G----af~~~~pI~Pv~i~y~~~~~~~~w~~~~ 299 (558)
...+..+.+.++ ++. .+++.+--... +++...+|- +| |...++||+|+.+.....
T Consensus 163 ~~~~r~i~k~L~k~~~--~v~~l~Dq~~~~~~gv~v~FfG~~a~t~~g~a~LA~~~~apvvp~~~~R~~~---------- 230 (289)
T PRK08706 163 TEGLRALVKQFRKSSA--PFLYLPDQDFGRNDSVFVDFFGIQTATITGLSRIAALANAKVIPAIPVREAD---------- 230 (289)
T ss_pred hhhHHHHHHHHHhCCc--eEEEeCCCCCCCCCCEEeccCCccchhhhHHHHHHHhcCCeEEEEEEEEcCC----------
Confidence 346777888884 565 66666544332 223334552 22 334899999999865421
Q ss_pred HHHHHHHHhccccceEEEEEecccCCCcccccCHHHHHHHHHHHHHHhcCCcccCCchh
Q 008641 300 LGKLMFRMFTQFHNFMEVEYLPVVFPSDNQKENALRFAERTSHAMASALNAVQTSHAYG 358 (558)
Q Consensus 300 ~~~~~~~~~~~~~~~~~v~~l~pi~~~~~~~~~~~~~~~~v~~~i~~~l~~~~~~~~~~ 358 (558)
+..++++.+++.. ...++..+.++++-+.+.+.....+.+|=|-
T Consensus 231 -------------~~~~i~i~~~~~~--~~~~~~~~~t~~~~~~lE~~Ir~~P~QW~W~ 274 (289)
T PRK08706 231 -------------NTVTLHFYPAWDS--FPSEDAQADAQRMNRFIEERVREHPEQYFWL 274 (289)
T ss_pred -------------CcEEEEEecCCCC--CCCCCHHHHHHHHHHHHHHHHHcCcHHHHHH
Confidence 1346777777764 2245777888888888888777777776543
No 158
>PRK06628 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=96.13 E-value=0.65 Score=46.30 Aligned_cols=161 Identities=10% Similarity=0.182 Sum_probs=93.5
Q ss_pred EEEccccC---CCCCCCEEEeCCCCchhHHHHhhh-cc-cce-eeccccCCCCHHHHHHHh----cceEEEecCCccchH
Q 008641 164 IRRKGKPA---PRQIAPIVVSNHISYIEPIFFFYE-LF-PTI-VASESHDSIPFVGTIIRA----MQVIYVDRFSQSSRK 233 (558)
Q Consensus 164 ~~~~g~~~---~~~~~~iivsNH~S~~D~~~l~~~-~~-p~~-v~k~~l~~~p~~g~~~~~----~g~i~v~r~~~~~~~ 233 (558)
+.++|.+. ....|+|+++-|.+.||....... .. |.. +.+. .+.|.+..++.. .|.-.+.. ..
T Consensus 100 v~~~g~e~l~~~~gkgvIl~t~H~GnwE~~~~~l~~~~~~~~~vyr~--~~n~~~d~~~~~~R~~~g~~~i~~-----~~ 172 (290)
T PRK06628 100 IEIIGIENIKKLEGQPFLLFSGHFANWDISLKILHKFYPKVAVIYRK--ANNPYVNKLVNESRAGDKLRLIPK-----GP 172 (290)
T ss_pred EEEeCHHHHHHhcCCcEEEEEecchHHHHHHHHHHHhCCCeeEEEec--CCCHHHHHHHHHHHHhcCCceecC-----CC
Confidence 55666543 245688999999999996543333 22 333 3333 356777665533 33233321 12
Q ss_pred HHHHHHHHHHhcCCCCeEEEeeCceecCCCcccccc-------cc----cccCCCceeEEEEEccCCCCCCCCCCccHHH
Q 008641 234 NAVSEIKRKASCDRFPRVLLFPEGTTTNGKFLISFQ-------LG----AFIPAYPIQPVIVRYPHVHFDQSWGDVSLGK 302 (558)
Q Consensus 234 ~~~~~~~~~l~~~~~~~l~iFPEGt~s~~~~ll~Fk-------~G----af~~~~pI~Pv~i~y~~~~~~~~w~~~~~~~ 302 (558)
..++.+.+.+++|+ .+++.|--... ++...+|- +| |...++||+|+.+.....
T Consensus 173 ~~~r~l~k~Lk~g~--~v~il~Dq~~~-~gv~v~FFG~~a~t~~~~a~LA~~~~apvv~~~~~r~~~------------- 236 (290)
T PRK06628 173 EGSRALVRAIKESE--SIVMLVDQKMN-DGIEVPFLGHPAMTASAIAKIALQYKYPIIPCQIIRTKG------------- 236 (290)
T ss_pred chHHHHHHHHHcCC--eEEEEecccCC-CCeeeecCCCccccchHHHHHHHHHCCCEEEEEEEECCC-------------
Confidence 34677888888898 88888655432 22234442 22 334799999999865421
Q ss_pred HHHHHhccccceEEEEEecccCCCcc--cccCHHHHHHHHHHHHHHhcCCcccCCch
Q 008641 303 LMFRMFTQFHNFMEVEYLPVVFPSDN--QKENALRFAERTSHAMASALNAVQTSHAY 357 (558)
Q Consensus 303 ~~~~~~~~~~~~~~v~~l~pi~~~~~--~~~~~~~~~~~v~~~i~~~l~~~~~~~~~ 357 (558)
...++++.|++++... ..++..+.++++-+.+.+.....+.+|-|
T Consensus 237 ----------~~~~i~~~~~~~~~~~~~~~~~~~~~t~~~n~~lE~~Ir~~PeQw~W 283 (290)
T PRK06628 237 ----------SYFKVIVHPQLKFEQTGDNKADCYNIMLNINQMLGEWVKQNPAQWFW 283 (290)
T ss_pred ----------CeEEEEEcCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHcCchhhEe
Confidence 2346788888765322 23445555666666666666555665543
No 159
>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]
Probab=96.06 E-value=0.015 Score=60.00 Aligned_cols=64 Identities=22% Similarity=0.370 Sum_probs=54.5
Q ss_pred HHHHHHhhhhCCCCCCcccHHHHHHHHHHhCC---CCcHHHHHHHHHHhCCCCCCceeHHHHHHHHHh
Q 008641 465 QACELAFAECDPDGNGFISENQLEVTIRPAIP---DLNKYEIDSLFRLFDSDGDGRVSRDDFICCLRK 529 (558)
Q Consensus 465 ~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~---~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~~ 529 (558)
..++..|...| |++|+|+..|+..++...+. ...++++++++...+.|.+|.|+++||+.++..
T Consensus 19 ~~l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~~g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~~~ 85 (627)
T KOG0046|consen 19 RELKEKFNKLD-DQKGYVTVYELPDAFKKAKLPLGYFVREEIKEILGEVGVDADGRVEFEEFVGIFLN 85 (627)
T ss_pred HHHHHHHHhhc-CCCCeeehHHhHHHHHHhcccccchhHHHHHHHHhccCCCcCCccCHHHHHHHHHh
Confidence 45678899999 89999999999999988764 345889999999999999999999999986544
No 160
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=95.99 E-value=0.0098 Score=35.60 Aligned_cols=26 Identities=42% Similarity=0.869 Sum_probs=16.2
Q ss_pred HHHHHHHhCCCCCCceeHHHHHHHHH
Q 008641 503 IDSLFRLFDSDGDGRVSRDDFICCLR 528 (558)
Q Consensus 503 i~~lf~~~D~d~dG~Is~~eF~~~l~ 528 (558)
++.+|+.+|.+++|.|+++||..+++
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~~ 27 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLLK 27 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHH
Confidence 44566666666666666666666554
No 161
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=95.91 E-value=0.021 Score=45.24 Aligned_cols=64 Identities=16% Similarity=0.320 Sum_probs=52.0
Q ss_pred HHHHHhhhhCCCCCCcccHHHHHHHHHHhC-C-CCcHHHHHHHHHHhCCC----CCCceeHHHHHHHHHhC
Q 008641 466 ACELAFAECDPDGNGFISENQLEVTIRPAI-P-DLNKYEIDSLFRLFDSD----GDGRVSRDDFICCLRKN 530 (558)
Q Consensus 466 ~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~-~-~~~~~~i~~lf~~~D~d----~dG~Is~~eF~~~l~~~ 530 (558)
+++.+|+.|-. +.+.|+.++|.++|.... . .++.+++..+++.+..+ ..+.+++++|..+|...
T Consensus 1 ei~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~S~ 70 (83)
T PF09279_consen 1 EIEEIFRKYSS-DKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLFSD 70 (83)
T ss_dssp HHHHHHHHHCT-TSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHHST
T ss_pred CHHHHHHHHhC-CCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHCCC
Confidence 46788999965 678999999999997653 3 46899999999998654 46899999999988754
No 162
>PRK08025 lipid A biosynthesis palmitoleoyl acyltransferase; Reviewed
Probab=95.88 E-value=1 Score=45.26 Aligned_cols=162 Identities=12% Similarity=0.077 Sum_probs=93.3
Q ss_pred EEEEccccCC-----CCCCCEEEeCCCCchhHHHHhhhc-ccceeeccccCCCCHHHHHHHhc----ceEEEecCCccch
Q 008641 163 WIRRKGKPAP-----RQIAPIVVSNHISYIEPIFFFYEL-FPTIVASESHDSIPFVGTIIRAM----QVIYVDRFSQSSR 232 (558)
Q Consensus 163 ~~~~~g~~~~-----~~~~~iivsNH~S~~D~~~l~~~~-~p~~v~k~~l~~~p~~g~~~~~~----g~i~v~r~~~~~~ 232 (558)
++.+.|.+.. ...|+|+++-|.+.||........ .|..+.-... +.|++..++... |.-.+.
T Consensus 107 ~v~~~g~e~l~~a~~~gkgvI~lt~H~GnwE~~~~~l~~~~~~~~vyr~~-~n~~~d~~~~~~R~~~g~~~i~------- 178 (305)
T PRK08025 107 WFDVEGLDNLKRAQMQNRGVMVVGVHFMSLELGGRVMGLCQPMMATYRPH-NNKLMEWVQTRGRMRSNKAMIG------- 178 (305)
T ss_pred eEEEECHHHHHHHHhCCCCEEEEecchhHHHHHHHHHHccCCCeEEEeCC-CCHHHHHHHHHHHhccCCcCcC-------
Confidence 3667775542 356889999999999975543332 3433332333 347777665333 222232
Q ss_pred HHHHHHHHHHHhcCCCCeEEEeeCceecC-CCcccccc--------cc----cccCCCceeEEEEEccCCCCCCCCCCcc
Q 008641 233 KNAVSEIKRKASCDRFPRVLLFPEGTTTN-GKFLISFQ--------LG----AFIPAYPIQPVIVRYPHVHFDQSWGDVS 299 (558)
Q Consensus 233 ~~~~~~~~~~l~~~~~~~l~iFPEGt~s~-~~~ll~Fk--------~G----af~~~~pI~Pv~i~y~~~~~~~~w~~~~ 299 (558)
.+.++.+.+.+++|+ .+++-|--.... ++...+|- +| |...++||+|+.+.....
T Consensus 179 ~~~~r~~~~aLk~g~--~v~il~DQ~~~~~~gv~v~FfG~~~a~t~~g~~~LA~~~~apvvp~~~~R~~~---------- 246 (305)
T PRK08025 179 RNNLRGIVGALKKGE--AVWFAPDQDYGPKGSSFAPFFAVENVATTNGTYVLSRLSGAAMLTVTMVRKAD---------- 246 (305)
T ss_pred cccHHHHHHHHhCCC--eEEEeCCCCCCCCCCeEeCCCCCcchhHHHHHHHHHHhhCCeEEEEEEEEeCC----------
Confidence 112566788888898 888875543322 23334542 22 234899999999855431
Q ss_pred HHHHHHHHhccccceEEEEEecccCCCcccccCHHHHHHHHHHHHHHhcCCcccCCchhh
Q 008641 300 LGKLMFRMFTQFHNFMEVEYLPVVFPSDNQKENALRFAERTSHAMASALNAVQTSHAYGD 359 (558)
Q Consensus 300 ~~~~~~~~~~~~~~~~~v~~l~pi~~~~~~~~~~~~~~~~v~~~i~~~l~~~~~~~~~~d 359 (558)
....+|++.||+... . ++..+.++.+-+.+.+.....+.+|-|-.
T Consensus 247 ------------~~~~~i~~~~~~~~~--~-~~~~~~~~~~n~~lE~~Ir~~PeQw~W~h 291 (305)
T PRK08025 247 ------------YSGYRLFITPEMEGY--P-TDENQAAAYMNKIIEKEIMRAPEQYLWIH 291 (305)
T ss_pred ------------CCeEEEEEeCCccCC--C-CCHHHHHHHHHHHHHHHHHcCcHHHHHHH
Confidence 112367777776542 1 45555566666666666666666665433
No 163
>PRK08905 lipid A biosynthesis lauroyl acyltransferase; Validated
Probab=95.66 E-value=1 Score=44.83 Aligned_cols=161 Identities=12% Similarity=0.085 Sum_probs=95.0
Q ss_pred EEEccccC-----CCCCCCEEEeCCCCchhHHHHhhhc-ccc-eeeccccCCCCHHHHHHHhc----ceEEEecCCccch
Q 008641 164 IRRKGKPA-----PRQIAPIVVSNHISYIEPIFFFYEL-FPT-IVASESHDSIPFVGTIIRAM----QVIYVDRFSQSSR 232 (558)
Q Consensus 164 ~~~~g~~~-----~~~~~~iivsNH~S~~D~~~l~~~~-~p~-~v~k~~l~~~p~~g~~~~~~----g~i~v~r~~~~~~ 232 (558)
+.++|.+. ....++|+++-|...||........ .|. .+.+. .+.|.+..++... |.-.+. . .
T Consensus 85 ~~~~g~e~l~~a~~~gkgvIllt~H~GnwE~~~~~~~~~~~~~~v~r~--~~n~~~~~~~~~~R~~~g~~~i~-~----~ 157 (289)
T PRK08905 85 KDDHGWEHVEAALAEGRGILFLTPHLGCFEVTARYIAQRFPLTAMFRP--PRKAALRPLMEAGRARGNMRTAP-A----T 157 (289)
T ss_pred eeecCHHHHHHHHhcCCCEEEEecccchHHHHHHHHHhcCCceEEEEC--CCCHHHHHHHHHHhcccCCceec-c----C
Confidence 45666443 2356788899999999975433222 343 34333 3456666554332 211221 1 1
Q ss_pred HHHHHHHHHHHhcCCCCeEEEeeCceec-CCCccccc-------ccc----cccCCCceeEEEEEccCCCCCCCCCCccH
Q 008641 233 KNAVSEIKRKASCDRFPRVLLFPEGTTT-NGKFLISF-------QLG----AFIPAYPIQPVIVRYPHVHFDQSWGDVSL 300 (558)
Q Consensus 233 ~~~~~~~~~~l~~~~~~~l~iFPEGt~s-~~~~ll~F-------k~G----af~~~~pI~Pv~i~y~~~~~~~~w~~~~~ 300 (558)
...+..+.+.+++|+ .|++-+--..+ .++...+| -.| |...++||+|+.+.....
T Consensus 158 ~~~~~~i~~aLk~g~--~v~il~Dq~~~~~~g~~v~FfG~~a~~~~gpa~lA~~~~apvvp~~~~R~~~----------- 224 (289)
T PRK08905 158 PQGVRMLVKALRRGE--AVGILPDQVPSGGEGVWAPFFGRPAYTMTLVARLAEVTGVPVIFVAGERLPR----------- 224 (289)
T ss_pred CccHHHHHHHHhcCC--eEEEcCCCCCCCCCceEecCCCCcchHHHHHHHHHHhhCCcEEEEEEEEcCC-----------
Confidence 244677888888898 77777544332 22223344 223 334899999999865421
Q ss_pred HHHHHHHhccccceEEEEEecccCCCcccccCHHHHHHHHHHHHHHhcCCcccCCchh
Q 008641 301 GKLMFRMFTQFHNFMEVEYLPVVFPSDNQKENALRFAERTSHAMASALNAVQTSHAYG 358 (558)
Q Consensus 301 ~~~~~~~~~~~~~~~~v~~l~pi~~~~~~~~~~~~~~~~v~~~i~~~l~~~~~~~~~~ 358 (558)
....++++.+++.+. .++..+.++++-+.+++.....+.+|-|-
T Consensus 225 -----------~~~y~~~~~~~~~~~---~~~~~~~t~~~~~~lE~~Ir~~PeQW~W~ 268 (289)
T PRK08905 225 -----------GRGYRLHLRPVQEPL---PGDKAADAAVINAEIERLIRRFPTQYLWG 268 (289)
T ss_pred -----------CCcEEEEEecCCCCC---CCCHHHHHHHHHHHHHHHHHcCcHHhhhh
Confidence 123467777777652 34667777777777777777777776543
No 164
>PRK05645 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=95.47 E-value=0.77 Score=45.93 Aligned_cols=163 Identities=10% Similarity=-0.017 Sum_probs=94.7
Q ss_pred EEEccccC-----CCCCCCEEEeCCCCchhHHHHhhhc-cc-ceeeccccCCCCHHHHHHHhc----ceEEEecCCccch
Q 008641 164 IRRKGKPA-----PRQIAPIVVSNHISYIEPIFFFYEL-FP-TIVASESHDSIPFVGTIIRAM----QVIYVDRFSQSSR 232 (558)
Q Consensus 164 ~~~~g~~~-----~~~~~~iivsNH~S~~D~~~l~~~~-~p-~~v~k~~l~~~p~~g~~~~~~----g~i~v~r~~~~~~ 232 (558)
+.+.|.+. ....++|+++=|.+.|+.+...... .+ ..+.+. .+.|.+..++... |.-.+. ..
T Consensus 96 ~~~~g~e~l~~a~~~gkgvI~lt~H~GnWE~~~~~~~~~~~~~~v~r~--~~n~~~d~~~~~~R~~~g~~~i~-----~~ 168 (295)
T PRK05645 96 REVEGLEVLEQALASGKGVVGITSHLGNWEVLNHFYCSQCKPIIFYRP--PKLKAVDELLRKQRVQLGNRVAP-----ST 168 (295)
T ss_pred eEecCHHHHHHHHhcCCCEEEEecchhhHHHHHHHHHhcCCCeEEEeC--CCCHHHHHHHHHHhCCCCCeEee-----cC
Confidence 35566543 2356789999999999965433222 23 334333 3456676555443 222221 12
Q ss_pred HHHHHHHHHHHhcCCCCeEEEeeCceec-CCCcccccccc-----------cccCCCceeEEEEEccCCCCCCCCCCccH
Q 008641 233 KNAVSEIKRKASCDRFPRVLLFPEGTTT-NGKFLISFQLG-----------AFIPAYPIQPVIVRYPHVHFDQSWGDVSL 300 (558)
Q Consensus 233 ~~~~~~~~~~l~~~~~~~l~iFPEGt~s-~~~~ll~Fk~G-----------af~~~~pI~Pv~i~y~~~~~~~~w~~~~~ 300 (558)
...+..+.+.+++|+ .|.+-+--..+ .++...+|-.- +...++||+|+.+.....
T Consensus 169 ~~~~r~l~kaLk~g~--~v~il~Dq~~~~~~gv~v~FfG~~a~t~~~~~~la~~~~~pvv~~~~~r~~~----------- 235 (295)
T PRK05645 169 KEGILSVIKEVRKGG--QVGIPADPEPAESAGIFVPFLGTQALTSKFVPNMLAGGKAVGVFLHALRLPD----------- 235 (295)
T ss_pred cccHHHHHHHHhcCC--eEEEcCCCCCCCCCCeEeCCCCCchhhhhHHHHHHHhhCCeEEEEEEEEcCC-----------
Confidence 345777888888998 88887554433 22233444211 223789999999865421
Q ss_pred HHHHHHHhccccceEEEEEecccCCCcccccCHHHHHHHHHHHHHHhcCCcccCCchhh
Q 008641 301 GKLMFRMFTQFHNFMEVEYLPVVFPSDNQKENALRFAERTSHAMASALNAVQTSHAYGD 359 (558)
Q Consensus 301 ~~~~~~~~~~~~~~~~v~~l~pi~~~~~~~~~~~~~~~~v~~~i~~~l~~~~~~~~~~d 359 (558)
....+|++.++... ...++..+.++++-+.+.+.....+.+|-|-.
T Consensus 236 -----------~~~y~i~~~~~~~~--~~~~~~~~~t~~~~~~lE~~Ir~~PeQw~W~h 281 (295)
T PRK05645 236 -----------GSGYKVILEAAPED--MYSTDVEVSAAAMSKVVERYVRAYPSQYMWSM 281 (295)
T ss_pred -----------CCeEEEEEecCCcC--CCCCCHHHHHHHHHHHHHHHHHcCcHHhhhhh
Confidence 11346777665432 23356777777777777777777777775543
No 165
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=95.21 E-value=0.021 Score=34.06 Aligned_cols=26 Identities=27% Similarity=0.395 Sum_probs=15.2
Q ss_pred HHHHhhhhCCCCCCcccHHHHHHHHH
Q 008641 467 CELAFAECDPDGNGFISENQLEVTIR 492 (558)
Q Consensus 467 ~~~~F~~~D~d~~G~Is~~E~~~~l~ 492 (558)
++.+|+.+|.+++|.|+.+||..+++
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~~ 27 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLLK 27 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHH
Confidence 34556666666666666666665554
No 166
>KOG4065 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.09 E-value=0.07 Score=43.73 Aligned_cols=64 Identities=14% Similarity=0.240 Sum_probs=41.7
Q ss_pred ccccChHHHHHHHHHHHhhCCCCCCcccHHHHHHHhc---------cC----CcH-H----HHHHHhhhcCCCCCceeHH
Q 008641 387 IFHISSLEAVNFLEKFLSMNPDPSGCVKLLDFLSVLR---------LK----TCP-L----SDEIFGFIDVDKNGSITFK 448 (558)
Q Consensus 387 ~~~lt~~~~~~~~~~F~~~D~d~~G~Is~~ef~~~l~---------~~----~~~-~----~~~lf~~~D~d~~g~Is~~ 448 (558)
..++|+++..- ..|...|-|++|.++--|+.+++. -. +++ + +..+.+.-|.|+||.|+|.
T Consensus 60 ~a~mtpeqlqf--HYF~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYg 137 (144)
T KOG4065|consen 60 VAKMTPEQLQF--HYFSMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYG 137 (144)
T ss_pred hhhCCHHHHhh--hhhhhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHH
Confidence 44577776643 568888999999999999877662 10 111 3 3334444567777777777
Q ss_pred HHHH
Q 008641 449 QFLY 452 (558)
Q Consensus 449 Ef~~ 452 (558)
||+.
T Consensus 138 EflK 141 (144)
T KOG4065|consen 138 EFLK 141 (144)
T ss_pred HHHh
Confidence 7764
No 167
>KOG0035 consensus Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=94.34 E-value=0.45 Score=53.24 Aligned_cols=103 Identities=11% Similarity=-0.053 Sum_probs=82.6
Q ss_pred cccccChHHHHHHHHHHHhhCCCCCCcccHHHHHHHh---ccCCc------HHHHHHHhhhcCCCCCceeHHHHHHHHHh
Q 008641 386 SIFHISSLEAVNFLEKFLSMNPDPSGCVKLLDFLSVL---RLKTC------PLSDEIFGFIDVDKNGSITFKQFLYASAH 456 (558)
Q Consensus 386 ~~~~lt~~~~~~~~~~F~~~D~d~~G~Is~~ef~~~l---~~~~~------~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~ 456 (558)
.....++.+..+++..|..+|+...|.++.++|.+.| |.... .++..+.+..|.+..|.+++.+|...+..
T Consensus 737 ~sk~~sQ~v~~ElrAle~~~~~~d~~aa~~e~~~~~Lmslg~~~e~ee~~~~e~~~lvn~~n~l~~~qv~~~e~~ddl~R 816 (890)
T KOG0035|consen 737 DSKGTSQYVLDELRALENEQDKIDGGAASPEELLRCLMSLGYNTEEEEQGIAEWFRLVNKKNPLIQGQVQLLEFEDDLER 816 (890)
T ss_pred cccchhHHHHHHHHHHHhHHHHhhcccCCHHHHHHHHHhcCcccchhHHHHHHHHHHHhccCcccccceeHHHHHhHhhh
Confidence 3445677888999999999999999999999998876 32222 14566666777777899999999999988
Q ss_pred hccCcchhHHHHHHhhhhCCCCCCcccHHHHHH
Q 008641 457 VMKLPLFWQACELAFAECDPDGNGFISENQLEV 489 (558)
Q Consensus 457 ~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~ 489 (558)
-....+.+.++..+|+.+-++.. +|..+|+.+
T Consensus 817 ~~e~l~~~~r~i~s~~d~~ktk~-~lL~eEL~~ 848 (890)
T KOG0035|consen 817 EYEDLDTELRAILAFEDWAKTKA-YLLLEELVR 848 (890)
T ss_pred hhhhhcHHHHHHHHHHHHHcchh-HHHHHHHHh
Confidence 87777778889999998877765 888888877
No 168
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=93.82 E-value=0.12 Score=40.88 Aligned_cols=64 Identities=16% Similarity=0.136 Sum_probs=46.8
Q ss_pred HHHHHHhhhcCCCCCceeHHHHHHHHHhhccCc-chhHHHHHHhhhhCCC----CCCcccHHHHHHHHHH
Q 008641 429 LSDEIFGFIDVDKNGSITFKQFLYASAHVMKLP-LFWQACELAFAECDPD----GNGFISENQLEVTIRP 493 (558)
Q Consensus 429 ~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~-~~~~~~~~~F~~~D~d----~~G~Is~~E~~~~l~~ 493 (558)
++..+|+.+.. +.+.++.++|..++...++.. .+.+.++.+++.|..+ ..+.++.++|..+|.+
T Consensus 1 ei~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~S 69 (83)
T PF09279_consen 1 EIEEIFRKYSS-DKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLFS 69 (83)
T ss_dssp HHHHHHHHHCT-TSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHHS
T ss_pred CHHHHHHHHhC-CCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHCC
Confidence 35677888855 677888888888887776653 3477788888877544 3688999999888865
No 169
>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=93.79 E-value=0.12 Score=53.09 Aligned_cols=73 Identities=21% Similarity=0.376 Sum_probs=62.9
Q ss_pred cccccChHHHHHHHHHHHhhCCCCCCcccHHHHHHHhccC--CcHHHHHHHhhhcCCCCCceeHHHHHHHHHhhc
Q 008641 386 SIFHISSLEAVNFLEKFLSMNPDPSGCVKLLDFLSVLRLK--TCPLSDEIFGFIDVDKNGSITFKQFLYASAHVM 458 (558)
Q Consensus 386 ~~~~lt~~~~~~~~~~F~~~D~d~~G~Is~~ef~~~l~~~--~~~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~ 458 (558)
...++|++|.+++...|+.+-.|-.|.|+-.--++++... +-+++..+++..|.|.||.++..||+.++..+.
T Consensus 221 ~pw~IT~EQReYYvnQFrtvQpDp~gfisGsaAknFFtKSklpi~ELshIWeLsD~d~DGALtL~EFcAAfHLVV 295 (737)
T KOG1955|consen 221 TPWQITPEQREYYVNQFRTVQPDPHGFISGSAAKNFFTKSKLPIEELSHIWELSDVDRDGALTLSEFCAAFHLVV 295 (737)
T ss_pred CccccCHHHHHHHHhhhhcccCCcccccccHHHHhhhhhccCchHHHHHHHhhcccCccccccHHHHHhhHhhee
Confidence 3457899999999999999999999999988887777543 335899999999999999999999999987654
No 170
>KOG3555 consensus Ca2+-binding proteoglycan Testican [General function prediction only]
Probab=93.67 E-value=0.073 Score=52.16 Aligned_cols=94 Identities=15% Similarity=0.091 Sum_probs=48.7
Q ss_pred HHHHHHHHHhhCCCCCCcccHHHHHHHh-cc------CCcHHHHHHHhhhcCCCCCceeHHHHHHHHHhhccCcchhHHH
Q 008641 395 AVNFLEKFLSMNPDPSGCVKLLDFLSVL-RL------KTCPLSDEIFGFIDVDKNGSITFKQFLYASAHVMKLPLFWQAC 467 (558)
Q Consensus 395 ~~~~~~~F~~~D~d~~G~Is~~ef~~~l-~~------~~~~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~~~~~~ 467 (558)
..+++..|..+-.+.++......+...- +. .-..++.-||+.+|.|.|+.++..|...+.... .+.-+
T Consensus 210 g~RL~dWF~~lhe~s~~~~~~ss~~~~~~~~d~s~~p~CKds~gWMFnklD~N~Dl~Ld~sEl~~I~ldk-----nE~Ci 284 (434)
T KOG3555|consen 210 GNRLRDWFKALHEDSSQNDKTSSLHSAASGFDTSILPICKDSLGWMFNKLDTNYDLLLDQSELRAIELDK-----NEACI 284 (434)
T ss_pred HHHHHHHHHHHHhhhhccCcchhhcccccccccccCcchhhhhhhhhhccccccccccCHHHhhhhhccC-----chhHH
Confidence 3567778887766666655555443321 11 111245556666666666666665554333211 13344
Q ss_pred HHHhhhhCCCCCCcccHHHHHHHHHH
Q 008641 468 ELAFAECDPDGNGFISENQLEVTIRP 493 (558)
Q Consensus 468 ~~~F~~~D~d~~G~Is~~E~~~~l~~ 493 (558)
+..|..+|...||.|+-.|+...+..
T Consensus 285 kpFfnsCD~~kDg~iS~~EWC~CF~k 310 (434)
T KOG3555|consen 285 KPFFNSCDTYKDGSISTNEWCYCFQK 310 (434)
T ss_pred HHHHhhhcccccCccccchhhhhhcc
Confidence 55555555555566665555555444
No 171
>KOG0998 consensus Synaptic vesicle protein EHS-1 and related EH domain proteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=93.45 E-value=0.065 Score=61.03 Aligned_cols=136 Identities=24% Similarity=0.373 Sum_probs=104.0
Q ss_pred cChHHHHHHHHHHHhhCCCCCCcccHHHHHHHhccC--CcHHHHHHHhhhcCCCCCceeHHHHHHHHHhhccC-------
Q 008641 390 ISSLEAVNFLEKFLSMNPDPSGCVKLLDFLSVLRLK--TCPLSDEIFGFIDVDKNGSITFKQFLYASAHVMKL------- 460 (558)
Q Consensus 390 lt~~~~~~~~~~F~~~D~d~~G~Is~~ef~~~l~~~--~~~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~------- 460 (558)
++.++...+...|..+.+. +|.++-...+.+|... +...+.+++...|.|.+|.+++.||...|......
T Consensus 123 ~~~qe~aky~q~f~s~~p~-~g~~sg~~~~pil~~s~Lp~~~l~~iw~l~d~d~~g~Ld~~ef~~am~l~~~~l~~~~~p 201 (847)
T KOG0998|consen 123 ITPQEQAKYDQIFRSLSPS-NGLLSGDKAKPILLNSKLPSDVLGRIWELSDIDKDGNLDRDEFAVAMHLINDLLNGNSEP 201 (847)
T ss_pred CCHHHHHHHHHHHhccCCC-CCccccchhhhhhhcCCCChhhhccccccccccccCCCChhhhhhhhhHHHHHhhcccCC
Confidence 6677777888888888764 7888888877777533 33456678888888888889888888665532110
Q ss_pred -----------------------------------------------------------------------------cch
Q 008641 461 -----------------------------------------------------------------------------PLF 463 (558)
Q Consensus 461 -----------------------------------------------------------------------------~~~ 463 (558)
...
T Consensus 202 ~P~~~p~~lIpps~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~~~~~~s~~~~~~~~~~q~~~s~~~~vsp~d 281 (847)
T KOG0998|consen 202 VPSRLPPSLIPPSKSELSANSSSKAIPFSQPFLASMASPTTLSSLVDLSALNSNPSLSSLSLASSMQLIVSWSPKVSPSD 281 (847)
T ss_pred CCccCCcccCCcchhcccccCcccccccccccccccccccccccccchhcccCCccccccccccccccccccCcccChHH
Confidence 011
Q ss_pred hHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCcHHHHHHHHHHhCCCCCCceeHHHHHHHHH
Q 008641 464 WQACELAFAECDPDGNGFISENQLEVTIRPAIPDLNKYEIDSLFRLFDSDGDGRVSRDDFICCLR 528 (558)
Q Consensus 464 ~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~ 528 (558)
...+..+|...|.+.+|.|+..+....+... +++.+.+..++...|.++.|.+++++|.-.+-
T Consensus 282 ~~~~~~if~q~d~~~dG~I~s~~~~~~f~~~--gl~~~~l~~~w~l~d~~n~~~ls~~ef~~~~~ 344 (847)
T KOG0998|consen 282 KQKYSKIFSQVDKDNDGSISSNEARNIFLPF--GLSKPRLAHVWLLADTQNTGTLSKDEFALAMH 344 (847)
T ss_pred HHHHHHHHHhccccCCCcccccccccccccC--CCChhhhhhhhhhcchhccCcccccccchhhh
Confidence 2355678999999999999999999988774 58889999999999999999999998875553
No 172
>PLN02952 phosphoinositide phospholipase C
Probab=93.14 E-value=0.53 Score=51.15 Aligned_cols=88 Identities=17% Similarity=0.122 Sum_probs=64.3
Q ss_pred CCCceeHHHHHHHHHhhcc-CcchhHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCC--CCcHHHHHHHHHHhC------
Q 008641 441 KNGSITFKQFLYASAHVMK-LPLFWQACELAFAECDPDGNGFISENQLEVTIRPAIP--DLNKYEIDSLFRLFD------ 511 (558)
Q Consensus 441 ~~g~Is~~Ef~~~~~~~~~-~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~--~~~~~~i~~lf~~~D------ 511 (558)
+.|.++|+||..+...+.. ......++..+|..+-.++ +.++.++|..+|..... ..+.+++..+++.+-
T Consensus 13 ~~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~~~-~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~~~~~~~~~~~ 91 (599)
T PLN02952 13 DSGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSVGG-GHMGADQLRRFLVLHQDELDCTLAEAQRIVEEVINRRHHV 91 (599)
T ss_pred cCCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhCCC-CccCHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHhhcccc
Confidence 4589999999887765542 2234688999999996544 68999999999988643 356777777766542
Q ss_pred -CCCCCceeHHHHHHHHHh
Q 008641 512 -SDGDGRVSRDDFICCLRK 529 (558)
Q Consensus 512 -~d~dG~Is~~eF~~~l~~ 529 (558)
..+.+.+++++|..+|..
T Consensus 92 ~~~~~~~l~~~~F~~~l~s 110 (599)
T PLN02952 92 TRYTRHGLNLDDFFHFLLY 110 (599)
T ss_pred ccccccCcCHHHHHHHHcC
Confidence 112346899999999874
No 173
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=93.07 E-value=1.1 Score=40.23 Aligned_cols=63 Identities=21% Similarity=0.228 Sum_probs=45.9
Q ss_pred hHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCC-------CcHHHHHHHHHHhCCCCCCceeHHHHHHHH
Q 008641 464 WQACELAFAECDPDGNGFISENQLEVTIRPAIPD-------LNKYEIDSLFRLFDSDGDGRVSRDDFICCL 527 (558)
Q Consensus 464 ~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~-------~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l 527 (558)
.++++.+|.++++.+.+.++..|+.++++..... .+.-|-..++... .|.||.+..|+...+.
T Consensus 95 p~kFe~iF~kya~~~~d~LT~~E~~~m~~~nr~~~D~~GW~a~~~EW~~~y~L~-~d~dG~l~Ke~iR~vY 164 (174)
T PF05042_consen 95 PQKFEEIFSKYAKTGPDALTLRELWRMLKGNRNANDPFGWFAAFFEWGALYILA-KDKDGFLSKEDIRGVY 164 (174)
T ss_pred HHHHHHHHHHhCCCCCCCcCHHHHHHHHHhccccCCcchhhhhhhHHHHHHHHH-cCcCCcEeHHHHhhhc
Confidence 5688999999999888999999999999874321 1233444455544 5789999998876543
No 174
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=92.93 E-value=0.5 Score=51.60 Aligned_cols=96 Identities=21% Similarity=0.247 Sum_probs=75.6
Q ss_pred HHHHHHhhhcCCCCCceeHHHHHHHHHhhccCcchhHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCcHHHHHHHHH
Q 008641 429 LSDEIFGFIDVDKNGSITFKQFLYASAHVMKLPLFWQACELAFAECDPDGNGFISENQLEVTIRPAIPDLNKYEIDSLFR 508 (558)
Q Consensus 429 ~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~i~~lf~ 508 (558)
-+..+|+..|++++|.+++.+-..++..+...-. ...++..|+..|..++|.+..+++.++-...... . ++..+|.
T Consensus 137 wi~~~~~~ad~~~~~~~~~~~~~~~~~~~n~~l~-~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~~~~r--p-ev~~~f~ 212 (746)
T KOG0169|consen 137 WIHSIFQEADKNKNGHMSFDEVLDLLKQLNVQLS-ESKARRLFKESDNSQTGKLEEEEFVKFRKELTKR--P-EVYFLFV 212 (746)
T ss_pred HHHHHHHHHccccccccchhhHHHHHHHHHHhhh-HHHHHHHHHHHHhhccceehHHHHHHHHHhhccC--c-hHHHHHH
Confidence 5788999999999999999998888776654333 6778889998898899999999999988765422 2 7777777
Q ss_pred HhCCCCCCceeHHHHHHHHHh
Q 008641 509 LFDSDGDGRVSRDDFICCLRK 529 (558)
Q Consensus 509 ~~D~d~dG~Is~~eF~~~l~~ 529 (558)
.+-.+ .+.++.+++..++..
T Consensus 213 ~~s~~-~~~ls~~~L~~Fl~~ 232 (746)
T KOG0169|consen 213 QYSHG-KEYLSTDDLLRFLEE 232 (746)
T ss_pred HHhCC-CCccCHHHHHHHHHH
Confidence 77633 777887777777654
No 175
>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]
Probab=92.81 E-value=0.55 Score=49.86 Aligned_cols=148 Identities=14% Similarity=0.132 Sum_probs=87.5
Q ss_pred cccChHHHHHHHHHHHhhCCCCCCcccHHHH----HHHhccCCcH----HHHHHHhhhcCC--CCCceeHHHHHHHHHhh
Q 008641 388 FHISSLEAVNFLEKFLSMNPDPSGCVKLLDF----LSVLRLKTCP----LSDEIFGFIDVD--KNGSITFKQFLYASAHV 457 (558)
Q Consensus 388 ~~lt~~~~~~~~~~F~~~D~d~~G~Is~~ef----~~~l~~~~~~----~~~~lf~~~D~d--~~g~Is~~Ef~~~~~~~ 457 (558)
..|...-++.+.++|..-|.|.||.++-.|+ ...++.+... .++...+..-.+ .++.++..-|+.+...+
T Consensus 187 qelkp~~v~al~RIFki~D~d~D~~Lsd~Eln~fQ~~CF~~pl~p~~l~~vk~vv~e~~p~gv~~~~ltl~GFLfL~~lf 266 (625)
T KOG1707|consen 187 QELKPRCVKALKRIFKISDSDNDGALSDAELNDFQKKCFNTPLDPQELEDVKNVVQEICPDGVYERGLTLPGFLFLNTLF 266 (625)
T ss_pred ccccHHHHHHHHHHHhhhccccccccchhhhhHHHHHhcCCCCCHHHHHHHHHHHHhhcCchhhhccccccchHHHHHHH
Confidence 4567788899999999999999999999998 3345544432 334444433332 24456666666443322
Q ss_pred ccCcc-----------------------------------------hhHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCC
Q 008641 458 MKLPL-----------------------------------------FWQACELAFAECDPDGNGFISENQLEVTIRPAIP 496 (558)
Q Consensus 458 ~~~~~-----------------------------------------~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~ 496 (558)
..... ..+.+..+|..||.|+||-++.+|+..+.+..+
T Consensus 267 iergr~EttW~iLR~fgY~DsleL~~~~l~p~~~~~p~~s~ELs~~~~~Fl~~~f~~~D~d~Dg~L~p~El~~LF~~~P- 345 (625)
T KOG1707|consen 267 IERGRHETTWTILRKFGYTDSLELTDEYLPPRLKVPPDQSVELSPKGYRFLVDVFEKFDRDNDGALSPEELKDLFSTAP- 345 (625)
T ss_pred HHhccccchhhhhhhcCCcchhhhhhhhcCccccCCCCcceeccHHHHHHHHHHHHhccCCCCCCcCHHHHHHHhhhCC-
Confidence 11000 013567788888888888888888877776543
Q ss_pred CCcHHHHHHHHH-HhCCCCCCceeHHHHHH--HHHhCcchHHHHh
Q 008641 497 DLNKYEIDSLFR-LFDSDGDGRVSRDDFIC--CLRKNPLLIAIFS 538 (558)
Q Consensus 497 ~~~~~~i~~lf~-~~D~d~dG~Is~~eF~~--~l~~~~~~~~~~~ 538 (558)
...-- ...+. .--.+..|.++++-|.. .|...+++...+.
T Consensus 346 -~~pW~-~~~~~~~t~~~~~G~ltl~g~l~~WsL~Tlld~~~t~~ 388 (625)
T KOG1707|consen 346 -GSPWT-SSPYKDSTVKNERGWLTLNGFLSQWSLMTLLDPRRTLE 388 (625)
T ss_pred -CCCCC-CCcccccceecccceeehhhHHHHHHHHhhccHHHHHH
Confidence 23300 00000 00123568888888876 4455566555443
No 176
>PRK15174 Vi polysaccharide export protein VexE; Provisional
Probab=92.38 E-value=1.3 Score=49.79 Aligned_cols=148 Identities=16% Similarity=0.142 Sum_probs=79.0
Q ss_pred CCCCCEEEeCCCCchhHHHHhhhcc--cc-eeeccccCCCCHHHHHHHhcceEEEecCCccchHHHHHHHHHHHhcCCCC
Q 008641 173 RQIAPIVVSNHISYIEPIFFFYELF--PT-IVASESHDSIPFVGTIIRAMQVIYVDRFSQSSRKNAVSEIKRKASCDRFP 249 (558)
Q Consensus 173 ~~~~~iivsNH~S~~D~~~l~~~~~--p~-~v~k~~l~~~p~~g~~~~~~g~i~v~r~~~~~~~~~~~~~~~~l~~~~~~ 249 (558)
..+|+|+++-|.+.|+......... |. .+.+. .. .+-...|.-.|..++. .....+..+.+.+++|+
T Consensus 477 ~~kgvi~~t~H~gnwE~~~~~~~~~~~~~~~i~r~-~~------~~R~~~g~~~i~~~~~-~~~~~~r~i~~aLk~g~-- 546 (656)
T PRK15174 477 DQRGCIIVSAHLGAMYAGPMILSLLEMNSKWVAST-PG------VLKGGYGERLISVSDK-SEADVVRACMQTLHSGQ-- 546 (656)
T ss_pred cCCCEEEEecCcchhhHHHHHHHHcCCCceeeecc-hH------HHHHhcCCceeccCCC-CcchHHHHHHHHHHcCC--
Confidence 3568899999999999655443322 32 22222 11 2223333333432211 11345677888898998
Q ss_pred eEEEeeCceecCCCccccc-------ccc----cccCCCceeEEEEEccCCCCCCCCCCccHHHHHHHHhccccceEEEE
Q 008641 250 RVLLFPEGTTTNGKFLISF-------QLG----AFIPAYPIQPVIVRYPHVHFDQSWGDVSLGKLMFRMFTQFHNFMEVE 318 (558)
Q Consensus 250 ~l~iFPEGt~s~~~~ll~F-------k~G----af~~~~pI~Pv~i~y~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~v~ 318 (558)
.|+|-|-.....++...+| -.| |...++||+|+....... ...++++
T Consensus 547 ~v~il~Dq~~~~~~~~v~FfG~~a~~~~g~~~lA~~~~~pvv~~~~~~~~~----------------------~~~y~l~ 604 (656)
T PRK15174 547 SLVVAIDGALNLSAPTIDFFGQQITYSTFCSRLAWKMHLPTVFSVPIWKNR----------------------HIHFVLE 604 (656)
T ss_pred eEEEEeCCCCCCCCceeccCCCccCcCcHHHHHHHHHCCCEEEeEEEEecC----------------------ceeEEEE
Confidence 8888855553333333344 233 223799999999854321 1235667
Q ss_pred EecccCCCcccccCHHHHHHHHHHHHHHhcCCcccCCc
Q 008641 319 YLPVVFPSDNQKENALRFAERTSHAMASALNAVQTSHA 356 (558)
Q Consensus 319 ~l~pi~~~~~~~~~~~~~~~~v~~~i~~~l~~~~~~~~ 356 (558)
+.|+... ..+..+..++..+.+.+.+.....+|.
T Consensus 605 ~~~~~~~----~~~~~~~~~~~~~~y~~~l~~~~~~~P 638 (656)
T PRK15174 605 RMVDPLK----FESQLSFTERWKENYLQCVTRILQSDP 638 (656)
T ss_pred ecCCCcc----chhHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 7766433 123444444554455554444444444
No 177
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=92.30 E-value=0.16 Score=54.82 Aligned_cols=67 Identities=18% Similarity=0.265 Sum_probs=57.1
Q ss_pred ChHHHHHHHHHHHhhCCCCCCcccHHHHHHHhccCCc--HHHHHHHhhhcCCCCCceeHHHHHHHHHhh
Q 008641 391 SSLEAVNFLEKFLSMNPDPSGCVKLLDFLSVLRLKTC--PLSDEIFGFIDVDKNGSITFKQFLYASAHV 457 (558)
Q Consensus 391 t~~~~~~~~~~F~~~D~d~~G~Is~~ef~~~l~~~~~--~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~ 457 (558)
..-+.-+++++|..+|+..+|+++-.+-+.+|+...- ..+..++..-|.|+||+++-+||+..|..+
T Consensus 190 p~~~klKY~QlFNa~DktrsG~Lsg~qaR~aL~qS~Lpq~~LA~IW~LsDvd~DGkL~~dEfilam~li 258 (1118)
T KOG1029|consen 190 PQHNKLKYRQLFNALDKTRSGYLSGQQARSALGQSGLPQNQLAHIWTLSDVDGDGKLSADEFILAMHLI 258 (1118)
T ss_pred cchhhhHHHHHhhhcccccccccccHHHHHHHHhcCCchhhHhhheeeeccCCCCcccHHHHHHHHHHH
Confidence 4455667899999999999999999999999976543 378889999999999999999999877643
No 178
>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]
Probab=91.92 E-value=0.13 Score=50.13 Aligned_cols=66 Identities=18% Similarity=0.253 Sum_probs=46.1
Q ss_pred HHHHhhhhCCCCCCcccHHHHHHHHHHhCC-CCcHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCcc
Q 008641 467 CELAFAECDPDGNGFISENQLEVTIRPAIP-DLNKYEIDSLFRLFDSDGDGRVSRDDFICCLRKNPL 532 (558)
Q Consensus 467 ~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~-~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~~~~~ 532 (558)
+.--|..+|+|.++.|...|++-+=.-+.. .-...-.+.+|+..|.|+|-.|+++|+..+|...++
T Consensus 335 v~w~F~qLdkN~nn~i~rrEwKpFK~~l~k~s~~rkC~rk~~~yCDlNkDKkISl~Ew~~CL~~~~~ 401 (421)
T KOG4578|consen 335 VHWYFNQLDKNSNNDIERREWKPFKRVLLKKSKPRKCSRKFFKYCDLNKDKKISLDEWRGCLGVEKE 401 (421)
T ss_pred eeeeeeeecccccCccchhhcchHHHHHHhhccHHHHhhhcchhcccCCCceecHHHHhhhhccccc
Confidence 445578888888888888886544222211 234456778888888888888888888888865544
No 179
>KOG1265 consensus Phospholipase C [Lipid transport and metabolism]
Probab=91.73 E-value=1.8 Score=47.95 Aligned_cols=82 Identities=18% Similarity=0.312 Sum_probs=67.3
Q ss_pred ceeHHHHHHHHHhhccCcchhHHHHHHhhhhCCCCCCcccHHHHHHHHHHhC----------CCCcHHHHHHHHHHhCCC
Q 008641 444 SITFKQFLYASAHVMKLPLFWQACELAFAECDPDGNGFISENQLEVTIRPAI----------PDLNKYEIDSLFRLFDSD 513 (558)
Q Consensus 444 ~Is~~Ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~----------~~~~~~~i~~lf~~~D~d 513 (558)
..+++.|..++..++. ..+++.+|..+..++.-+++.++|..+|.... ...+...+..+++.+..|
T Consensus 204 ~f~~e~f~~~l~klcp----R~eie~iF~ki~~~~kpylT~~ql~dfln~~QrDpRLNeilfp~~~~~r~~~liekyEp~ 279 (1189)
T KOG1265|consen 204 DFTLEKFYRLLNKLCP----RPEIEEIFRKISGKKKPYLTKEQLVDFLNKKQRDPRLNEILFPPADPRRIQSLIEKYEPN 279 (1189)
T ss_pred hccHHHHHHHHHhcCC----chhHHHHHHHhccCCCccccHHHHHHHHhhhccCcchhhhhcCCCCHHHHHHHHHHcCCc
Confidence 3567777777777665 56799999999988888999999999997642 356788999999999877
Q ss_pred C----CCceeHHHHHHHHHh
Q 008641 514 G----DGRVSRDDFICCLRK 529 (558)
Q Consensus 514 ~----dG~Is~~eF~~~l~~ 529 (558)
+ +|.++-+-|++++..
T Consensus 280 ~~~a~~gqms~dgf~ryl~g 299 (1189)
T KOG1265|consen 280 SDNAEKGQMSTDGFVRYLMG 299 (1189)
T ss_pred hhhhhccccchhhhHHHhhC
Confidence 5 589999999999987
No 180
>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=91.57 E-value=0.55 Score=49.52 Aligned_cols=77 Identities=16% Similarity=0.175 Sum_probs=64.7
Q ss_pred cccccChHHHHHHHHHHHhhCCCCCCcccHHHHHHHhccCC----cHHHHHHHhhhcCCCCCceeHHHHHHHHHhhccCc
Q 008641 386 SIFHISSLEAVNFLEKFLSMNPDPSGCVKLLDFLSVLRLKT----CPLSDEIFGFIDVDKNGSITFKQFLYASAHVMKLP 461 (558)
Q Consensus 386 ~~~~lt~~~~~~~~~~F~~~D~d~~G~Is~~ef~~~l~~~~----~~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~ 461 (558)
....++.+++...+..|..+|.|+.|+++.++..+.|+... .+.++++.+..|.+.+|.+..+||.+++.......
T Consensus 583 ~~i~~~~~~~~~~~~rf~~lD~~k~~~~~i~~v~~vlk~~~~~~d~~~~~~~l~ea~~~~~g~v~l~e~~q~~s~~~~g~ 662 (680)
T KOG0042|consen 583 IPIKLTPEDFLRRKTRFAFLDADKKAYQAIADVLKVLKSENVGWDEDRLHEELQEADENLNGFVELREFLQLMSAIKNGC 662 (680)
T ss_pred cccccCHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhcceeeHHHHHHHHHHHhcCC
Confidence 34668999999999999999999999999999988885332 23688899999999999999999999988776554
Q ss_pred c
Q 008641 462 L 462 (558)
Q Consensus 462 ~ 462 (558)
.
T Consensus 663 ~ 663 (680)
T KOG0042|consen 663 T 663 (680)
T ss_pred h
Confidence 3
No 181
>KOG3555 consensus Ca2+-binding proteoglycan Testican [General function prediction only]
Probab=91.22 E-value=0.42 Score=47.00 Aligned_cols=65 Identities=14% Similarity=0.103 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHhhCCCCCCcccHHHHHHHhccCCcHHHHHHHhhhcCCCCCceeHHHHHHHHHhh
Q 008641 393 LEAVNFLEKFLSMNPDPSGCVKLLDFLSVLRLKTCPLSDEIFGFIDVDKNGSITFKQFLYASAHV 457 (558)
Q Consensus 393 ~~~~~~~~~F~~~D~d~~G~Is~~ef~~~l~~~~~~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~ 457 (558)
.-...+--+|..+|.|.||.++..|+..+-.-....-++.+|+..|...||.|+-.|+...+..-
T Consensus 247 ~CKds~gWMFnklD~N~Dl~Ld~sEl~~I~ldknE~CikpFfnsCD~~kDg~iS~~EWC~CF~k~ 311 (434)
T KOG3555|consen 247 ICKDSLGWMFNKLDTNYDLLLDQSELRAIELDKNEACIKPFFNSCDTYKDGSISTNEWCYCFQKS 311 (434)
T ss_pred chhhhhhhhhhccccccccccCHHHhhhhhccCchhHHHHHHhhhcccccCccccchhhhhhccC
Confidence 44566777899999999999999999766433333467889999999999999999998777543
No 182
>COG3176 Putative hemolysin [General function prediction only]
Probab=90.93 E-value=0.29 Score=47.93 Aligned_cols=128 Identities=17% Similarity=0.111 Sum_probs=75.6
Q ss_pred HHHHHhhCeEEEEEccccC-CCCCCCEEEeCCCCchhHHHHhhhcc---c--ceeec-cccCCCCHHHHHHHhcceEEEe
Q 008641 153 RCILFSFGYHWIRRKGKPA-PRQIAPIVVSNHISYIEPIFFFYELF---P--TIVAS-ESHDSIPFVGTIIRAMQVIYVD 225 (558)
Q Consensus 153 r~~~~~~g~~~~~~~g~~~-~~~~~~iivsNH~S~~D~~~l~~~~~---p--~~v~k-~~l~~~p~~g~~~~~~g~i~v~ 225 (558)
+.+..-+|++ +...+... +.+++.++||||..-.|...+.-.+. + ++++. +.+...|++... .+.|+
T Consensus 58 ~vf~~el~~~-l~~~~~~~~~d~d~fd~VcnHlgv~Dg~~~~d~~~~~vgtyR~l~~~~A~r~~~~ys~~-----ef~v~ 131 (292)
T COG3176 58 RVFSEELDAR-LDAAALERIPDQDRFDIVCNHLGVRDGVIVADLLKQLVGTYRLLANAQALRAGGFYSAL-----EFPVD 131 (292)
T ss_pred hhhhhhcCcc-cccccccccCCCCCeeEeccccceecccchhhhHhhhcCceEEeehHHHHHhCCCcccc-----cccee
Confidence 3444555765 44444444 57788999999998999777644432 2 33443 334555554322 34444
Q ss_pred cCCcc----chHHHHHHHHHHHhcCCCCeEEEeeCceecC-CCcccccccc---c----ccCCCceeEEEEEccC
Q 008641 226 RFSQS----SRKNAVSEIKRKASCDRFPRVLLFPEGTTTN-GKFLISFQLG---A----FIPAYPIQPVIVRYPH 288 (558)
Q Consensus 226 r~~~~----~~~~~~~~~~~~l~~~~~~~l~iFPEGt~s~-~~~ll~Fk~G---a----f~~~~pI~Pv~i~y~~ 288 (558)
.-... ........+.+..++|+ .+++||-|--.. .++-+.-..| + -..+.++.|+.+.+.+
T Consensus 132 ~~~~~~~~k~~e~grscv~~~yr~g~--tl~lfwaG~~ay~~~g~~~~~~gcaS~~~~~~~~~a~~~p~~~~~r~ 204 (292)
T COG3176 132 WLEELRPKKFNELGRSCVHREYREGR--TLLLFWAGLVAYLDKGRLDDMPGCASVPGLPRKHGAALAPVHHNGRN 204 (292)
T ss_pred eecccChHHHHHHHHHHHHHHHhcCC--EEEEeccchhHHhhccCcccCccccccccchhhcccccchhheeccc
Confidence 43222 22334556666778888 999999998763 2222222333 1 1267889999998654
No 183
>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]
Probab=90.86 E-value=0.18 Score=49.11 Aligned_cols=59 Identities=17% Similarity=0.200 Sum_probs=27.3
Q ss_pred HHhhhcCCCCCceeHHHHHHHHHhhccCcchhHHHHHHhhhhCCCCCCcccHHHHHHHH
Q 008641 433 IFGFIDVDKNGSITFKQFLYASAHVMKLPLFWQACELAFAECDPDGNGFISENQLEVTI 491 (558)
Q Consensus 433 lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l 491 (558)
.|..+|.|.++.|+..|++.+-..+.+......-.+.+|+.+|.|+|..|+++|++..|
T Consensus 338 ~F~qLdkN~nn~i~rrEwKpFK~~l~k~s~~rkC~rk~~~yCDlNkDKkISl~Ew~~CL 396 (421)
T KOG4578|consen 338 YFNQLDKNSNNDIERREWKPFKRVLLKKSKPRKCSRKFFKYCDLNKDKKISLDEWRGCL 396 (421)
T ss_pred eeeeecccccCccchhhcchHHHHHHhhccHHHHhhhcchhcccCCCceecHHHHhhhh
Confidence 34455555555555544443333322222223334445555555555555555555544
No 184
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=90.70 E-value=0.78 Score=41.10 Aligned_cols=101 Identities=13% Similarity=0.117 Sum_probs=63.6
Q ss_pred HHHHHHhhhcCCCCCceeHHHHHHHHHhhccCcchhHHHHHH-----hhhhCCCCCCcccHHHHHHHHHH-----hC---
Q 008641 429 LSDEIFGFIDVDKNGSITFKQFLYASAHVMKLPLFWQACELA-----FAECDPDGNGFISENQLEVTIRP-----AI--- 495 (558)
Q Consensus 429 ~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~~~~~~~~~-----F~~~D~d~~G~Is~~E~~~~l~~-----~~--- 495 (558)
.+++-...+|.|+||.|...|-...++.+...... ..+-.+ |.-.-. .+.+.---|.-.+++ .|
T Consensus 8 ~LQqHvaFFDrd~DGiI~P~dTy~GFraLGf~~~~-s~~aa~~I~~~lSy~T~--~~w~p~P~f~Iyi~nIhk~kHGSDS 84 (174)
T PF05042_consen 8 VLQQHVAFFDRDKDGIIYPWDTYQGFRALGFGILL-SLLAAFIIHGALSYPTQ--PSWIPDPFFRIYIKNIHKGKHGSDS 84 (174)
T ss_pred HHhhhhceeCCCCCeeECHHHHHHHHHHhCCCHHH-HHHHHHHHHcccCCccC--CCCCCCCceeEEeecccccccCCCc
Confidence 57888999999999999999988888887654321 111111 111000 111111111111111 01
Q ss_pred ------CCCcHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCcc
Q 008641 496 ------PDLNKYEIDSLFRLFDSDGDGRVSRDDFICCLRKNPL 532 (558)
Q Consensus 496 ------~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~~~~~ 532 (558)
-....+..+++|..++..+.+.+|+.|..++++.+-+
T Consensus 85 g~YD~eGrFvp~kFe~iF~kya~~~~d~LT~~E~~~m~~~nr~ 127 (174)
T PF05042_consen 85 GAYDTEGRFVPQKFEEIFSKYAKTGPDALTLRELWRMLKGNRN 127 (174)
T ss_pred cccccCCcCCHHHHHHHHHHhCCCCCCCcCHHHHHHHHHhccc
Confidence 1356788999999999988899999999999998654
No 185
>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=90.64 E-value=0.51 Score=48.57 Aligned_cols=63 Identities=24% Similarity=0.390 Sum_probs=54.0
Q ss_pred hHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCcHHHHHHHHHHhCCCCCCceeHHHHHHHHH
Q 008641 464 WQACELAFAECDPDGNGFISENQLEVTIRPAIPDLNKYEIDSLFRLFDSDGDGRVSRDDFICCLR 528 (558)
Q Consensus 464 ~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~ 528 (558)
++....-|+..-.|-.|+|+-.--++++.+. ++.-+|+..|++..|.|.||.++..||+.++.
T Consensus 230 ReYYvnQFrtvQpDp~gfisGsaAknFFtKS--klpi~ELshIWeLsD~d~DGALtL~EFcAAfH 292 (737)
T KOG1955|consen 230 REYYVNQFRTVQPDPHGFISGSAAKNFFTKS--KLPIEELSHIWELSDVDRDGALTLSEFCAAFH 292 (737)
T ss_pred HHHHHhhhhcccCCcccccccHHHHhhhhhc--cCchHHHHHHHhhcccCccccccHHHHHhhHh
Confidence 3455677899999999999988888888764 58889999999999999999999999998774
No 186
>KOG3866 consensus DNA-binding protein of the nucleobindin family [General function prediction only]
Probab=89.96 E-value=0.56 Score=45.44 Aligned_cols=61 Identities=21% Similarity=0.406 Sum_probs=37.4
Q ss_pred HHhhhhCCCCCCcccHHHHHHHHHHhC-----CCCcHHH-----------HHHHHHHhCCCCCCceeHHHHHHHHHh
Q 008641 469 LAFAECDPDGNGFISENQLEVTIRPAI-----PDLNKYE-----------IDSLFRLFDSDGDGRVSRDDFICCLRK 529 (558)
Q Consensus 469 ~~F~~~D~d~~G~Is~~E~~~~l~~~~-----~~~~~~~-----------i~~lf~~~D~d~dG~Is~~eF~~~l~~ 529 (558)
..|...|.|+||+++..|+..++..-. ..-.+++ -+.+++..|+|.|--||.+||++.-.+
T Consensus 248 TFF~LHD~NsDGfldeqELEaLFtkELEKvYdpkNeeDDM~EmeEErlRMREHVMk~vDtNqDRlvtleEFL~~t~~ 324 (442)
T KOG3866|consen 248 TFFALHDLNSDGFLDEQELEALFTKELEKVYDPKNEEDDMKEMEEERLRMREHVMKQVDTNQDRLVTLEEFLNDTDN 324 (442)
T ss_pred hheeeeccCCcccccHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHhcccchhhhhhHHHHHhhhhh
Confidence 445666666666666666655544321 1111111 124678899999999999999876543
No 187
>KOG4347 consensus GTPase-activating protein VRP [General function prediction only]
Probab=89.45 E-value=0.48 Score=50.75 Aligned_cols=102 Identities=18% Similarity=0.304 Sum_probs=71.8
Q ss_pred hccccccChHHHHHHHHHHHhh-----------CCCCCC---cccHHHHHHHhccC-C---c-HHHHHHHhhhcCCCCCc
Q 008641 384 VGSIFHISSLEAVNFLEKFLSM-----------NPDPSG---CVKLLDFLSVLRLK-T---C-PLSDEIFGFIDVDKNGS 444 (558)
Q Consensus 384 ~~~~~~lt~~~~~~~~~~F~~~-----------D~d~~G---~Is~~ef~~~l~~~-~---~-~~~~~lf~~~D~d~~g~ 444 (558)
+.+...++.++.+.+..+|..- |++-++ +|+...|...+... + + ....++|+..|.+.+|.
T Consensus 492 ~~~~~~lt~~dL~~lYd~f~~e~~~~~~~~~~~~p~~~~~eqyi~~~~f~~~f~~l~pw~~s~~~~~rlF~l~D~s~~g~ 571 (671)
T KOG4347|consen 492 VVQTTSLTNTDLENLYDLFKEEHLTNSIGLGRSDPDFEAFEQYIDYAQFLEVFRELLPWAVSLIFLERLFRLLDDSMTGL 571 (671)
T ss_pred hcccCccCHHHHHHHHHHHHHHHhccCcccCCCCCCchHHHHHHHHhhHHHHhhccCchhHHHHHHHHHHHhcccCCcce
Confidence 3345668888888888888642 111111 13333444443221 1 1 26788999999999999
Q ss_pred eeHHHHHHHHHhhccCcchhHHHHHHhhhhCCCCCCcccHHHH
Q 008641 445 ITFKQFLYASAHVMKLPLFWQACELAFAECDPDGNGFISENQL 487 (558)
Q Consensus 445 Is~~Ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~ 487 (558)
++|.+++..+..++.... .+.++.+|+.+|.+++ ..+.+|.
T Consensus 572 Ltf~~lv~gL~~l~~~~~-~ek~~l~y~lh~~p~~-~~d~e~~ 612 (671)
T KOG4347|consen 572 LTFKDLVSGLSILKAGDA-LEKLKLLYKLHDPPAD-ELDREEV 612 (671)
T ss_pred eEHHHHHHHHHHHHhhhH-HHHHHHHHhhccCCcc-ccccccc
Confidence 999999999987766443 6888999999999999 8999888
No 188
>KOG4347 consensus GTPase-activating protein VRP [General function prediction only]
Probab=89.20 E-value=1.8 Score=46.46 Aligned_cols=78 Identities=18% Similarity=0.241 Sum_probs=65.4
Q ss_pred eeHHHHHHHHHhhccCcchhHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCcHHHHHHHHHHhCCCCCCceeHHHH
Q 008641 445 ITFKQFLYASAHVMKLPLFWQACELAFAECDPDGNGFISENQLEVTIRPAIPDLNKYEIDSLFRLFDSDGDGRVSRDDF 523 (558)
Q Consensus 445 Is~~Ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D~d~dG~Is~~eF 523 (558)
|+|+.|...+........+..-++.+|+.+|.+++|.|++.++...|..+..+-.-+.+.-+|+.+|.++| ..+.+|-
T Consensus 535 i~~~~f~~~f~~l~pw~~s~~~~~rlF~l~D~s~~g~Ltf~~lv~gL~~l~~~~~~ek~~l~y~lh~~p~~-~~d~e~~ 612 (671)
T KOG4347|consen 535 IDYAQFLEVFRELLPWAVSLIFLERLFRLLDDSMTGLLTFKDLVSGLSILKAGDALEKLKLLYKLHDPPAD-ELDREEV 612 (671)
T ss_pred HHHhhHHHHhhccCchhHHHHHHHHHHHhcccCCcceeEHHHHHHHHHHHHhhhHHHHHHHHHhhccCCcc-ccccccc
Confidence 66888888887766555556778999999999999999999999999887655666778889999999998 8887776
No 189
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=88.52 E-value=2.3 Score=38.00 Aligned_cols=59 Identities=14% Similarity=0.279 Sum_probs=42.6
Q ss_pred hhhhCCCCCCcccHHHHHHHHHHhCC---CCcHHHHHHHHHHhCCCCCCceeHHHHHHHHHh
Q 008641 471 FAECDPDGNGFISENQLEVTIRPAIP---DLNKYEIDSLFRLFDSDGDGRVSRDDFICCLRK 529 (558)
Q Consensus 471 F~~~D~d~~G~Is~~E~~~~l~~~~~---~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~~ 529 (558)
|..|-..+...++-..|..+++..+. .++..+++.+|..+-..+...|+|++|..+|..
T Consensus 8 f~~fG~~~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~~ 69 (154)
T PF05517_consen 8 FASFGKKNGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAKGARKITFEQFLEALAE 69 (154)
T ss_dssp HHCSSTSTSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHHHH
T ss_pred HHHhcCCccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcCCCcccCHHHHHHHHHH
Confidence 33334455568888999999988753 578888999999876556667999999888864
No 190
>KOG2243 consensus Ca2+ release channel (ryanodine receptor) [Signal transduction mechanisms]
Probab=88.50 E-value=4.4 Score=46.92 Aligned_cols=59 Identities=27% Similarity=0.458 Sum_probs=49.4
Q ss_pred HHhhhhCCCCCCcccHHHHHHHHHHhCCCCcHHHHHHHHHHhCCCCCCceeHHHHHHHHH
Q 008641 469 LAFAECDPDGNGFISENQLEVTIRPAIPDLNKYEIDSLFRLFDSDGDGRVSRDDFICCLR 528 (558)
Q Consensus 469 ~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~ 528 (558)
..|+.||.||.|.|+..||.+++.... ..++.+++-+..-...|.+...+|+||++-+.
T Consensus 4061 dtfkeydpdgkgiiskkdf~kame~~k-~ytqse~dfllscae~dend~~~y~dfv~rfh 4119 (5019)
T KOG2243|consen 4061 DTFKEYDPDGKGIISKKDFHKAMEGHK-HYTQSEIDFLLSCAEADENDMFDYEDFVDRFH 4119 (5019)
T ss_pred ccchhcCCCCCccccHHHHHHHHhccc-cchhHHHHHHHHhhccCccccccHHHHHHHhc
Confidence 458999999999999999999987643 56788888888888888888999999987654
No 191
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=87.62 E-value=4 Score=32.65 Aligned_cols=67 Identities=15% Similarity=0.237 Sum_probs=44.0
Q ss_pred hHHHHHHhhhhCCCCCCcccHHHHHHHHHHh-------CC----CCcHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCcc
Q 008641 464 WQACELAFAECDPDGNGFISENQLEVTIRPA-------IP----DLNKYEIDSLFRLFDSDGDGRVSRDDFICCLRKNPL 532 (558)
Q Consensus 464 ~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~-------~~----~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~~~~~ 532 (558)
+++.+.+|+.+ .|++|.++...|..+|.+. |+ +-.+.-++..|+.. ..+-.|+.++|++.|...|.
T Consensus 2 ~dKyRylFsli-sd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~~e~sv~sCF~~~--~~~~~I~~~~Fl~wl~~ePq 78 (90)
T PF09069_consen 2 EDKYRYLFSLI-SDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGYIEPSVRSCFQQV--QLSPKITENQFLDWLMSEPQ 78 (90)
T ss_dssp HHHHHHHHHHH-S-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT--HHHHHHHHHHT--TT-S-B-HHHHHHHHHT--T
T ss_pred hHHHHHHHHHH-cCCCCCCcHHHHHHHHHHHHHHHHHhCccccccCcHHHHHHHhccc--CCCCccCHHHHHHHHHhCCC
Confidence 46788999998 5778999999998888753 32 23677788888876 25668999999999998875
Q ss_pred h
Q 008641 533 L 533 (558)
Q Consensus 533 ~ 533 (558)
.
T Consensus 79 ~ 79 (90)
T PF09069_consen 79 S 79 (90)
T ss_dssp T
T ss_pred e
Confidence 3
No 192
>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=87.36 E-value=1 Score=47.55 Aligned_cols=64 Identities=13% Similarity=0.162 Sum_probs=58.7
Q ss_pred HHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCcHHHHHHHHHHhCCCCCCceeHHHHHHHHHh
Q 008641 466 ACELAFAECDPDGNGFISENQLEVTIRPAIPDLNKYEIDSLFRLFDSDGDGRVSRDDFICCLRK 529 (558)
Q Consensus 466 ~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~~ 529 (558)
..+.-|..+|.|+.|+++.++..++++..+.+++++.++++.++.|.+.+|.+..+||.+++..
T Consensus 594 ~~~~rf~~lD~~k~~~~~i~~v~~vlk~~~~~~d~~~~~~~l~ea~~~~~g~v~l~e~~q~~s~ 657 (680)
T KOG0042|consen 594 RRKTRFAFLDADKKAYQAIADVLKVLKSENVGWDEDRLHEELQEADENLNGFVELREFLQLMSA 657 (680)
T ss_pred HHHHHHHhhcchHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhcceeeHHHHHHHHHH
Confidence 4567799999999999999999999999998999999999999999999999999999887764
No 193
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=82.71 E-value=0.82 Score=34.53 Aligned_cols=55 Identities=16% Similarity=0.241 Sum_probs=37.3
Q ss_pred hhHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCcHHHHHHHHHHhCCC-------CCCceeHHHHHH
Q 008641 463 FWQACELAFAECDPDGNGFISENQLEVTIRPAIPDLNKYEIDSLFRLFDSD-------GDGRVSRDDFIC 525 (558)
Q Consensus 463 ~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D~d-------~dG~Is~~eF~~ 525 (558)
+.+++..+|+.+ .++.++|+.+||++.|.. ++++-+.+.+... ..|.++|..|+.
T Consensus 4 s~eqv~~aFr~l-A~~KpyVT~~dLr~~l~p-------e~aey~~~~Mp~~~~~~~~~~~~~~DY~~f~~ 65 (69)
T PF08726_consen 4 SAEQVEEAFRAL-AGGKPYVTEEDLRRSLTP-------EQAEYCISRMPPYEGPDGDAIPGAYDYESFTN 65 (69)
T ss_dssp TCHHHHHHHHHH-CTSSSCEEHHHHHHHS-C-------CCHHHHHCCSEC--SSS----TTEEECHHHHC
T ss_pred CHHHHHHHHHHH-HcCCCcccHHHHHHHcCc-------HHHHHHHHHCcccCCCCcCCCCCCcCHHHHHH
Confidence 468899999999 677899999999998643 2233444433221 126799988864
No 194
>KOG0039 consensus Ferric reductase, NADH/NADPH oxidase and related proteins [Inorganic ion transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=80.12 E-value=3.5 Score=45.92 Aligned_cols=87 Identities=20% Similarity=0.307 Sum_probs=68.5
Q ss_pred CCceeHHHHHHHHHhhccCcchhHHHHHHhhhhCCCCCCcccHHHHHHHHHHhC--------CCCcHHHHHHHHHHhCCC
Q 008641 442 NGSITFKQFLYASAHVMKLPLFWQACELAFAECDPDGNGFISENQLEVTIRPAI--------PDLNKYEIDSLFRLFDSD 513 (558)
Q Consensus 442 ~g~Is~~Ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~--------~~~~~~~i~~lf~~~D~d 513 (558)
+| |+++||. ....+.++.++..|..+|. ++|.++.+|+..++.... .....+....++++.|.+
T Consensus 2 ~~-~~~~~~~------~~~~~~d~~l~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (646)
T KOG0039|consen 2 EG-ISFQELK------ITDCSYDDKLQTFFDMYDK-GDGKLTEEEVRELIMSSISANWLSLIKKQTEEYAALIMEELDPD 73 (646)
T ss_pred CC-cchhhhc------ccCCChhHHHHHHHHHHhh-hcCCccHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHhhhhcccc
Confidence 56 9999998 2233447899999999998 889999999998876542 234556677889999999
Q ss_pred CCCceeHHHHHHHHHhCcchHHH
Q 008641 514 GDGRVSRDDFICCLRKNPLLIAI 536 (558)
Q Consensus 514 ~dG~Is~~eF~~~l~~~~~~~~~ 536 (558)
..|.+.++++...+...+.....
T Consensus 74 ~~~y~~~~~~~~ll~~~~~~~~~ 96 (646)
T KOG0039|consen 74 HKGYITNEDLEILLLQIPTLLFA 96 (646)
T ss_pred ccceeeecchhHHHHhchHHHHH
Confidence 99999999999999988754443
No 195
>KOG3866 consensus DNA-binding protein of the nucleobindin family [General function prediction only]
Probab=77.76 E-value=23 Score=34.68 Aligned_cols=115 Identities=10% Similarity=0.054 Sum_probs=69.8
Q ss_pred HHHHHhhccccccChHHHHHHHHHHHhhCC--------CCCCcccHHHHHHHh----ccCCcH-HHHHHHhhhcCCCCCc
Q 008641 378 MVEMARVGSIFHISSLEAVNFLEKFLSMNP--------DPSGCVKLLDFLSVL----RLKTCP-LSDEIFGFIDVDKNGS 444 (558)
Q Consensus 378 l~e~~~~~~~~~lt~~~~~~~~~~F~~~D~--------d~~G~Is~~ef~~~l----~~~~~~-~~~~lf~~~D~d~~g~ 444 (558)
+.+-++......|+.++.+.-...|...-+ +.-| |..++.... |+.+.. .-+..|...|.|+||.
T Consensus 183 ~KehErr~yL~~l~eE~Rkeaesk~EE~~krH~~HpKvnhPG--SkdQLkEVWEE~DgLdpn~fdPKTFF~LHD~NsDGf 260 (442)
T KOG3866|consen 183 KKEHERRHYLAQLTEEERKEAESKHEESLKRHNDHPKVNHPG--SKDQLKEVWEESDGLDPNQFDPKTFFALHDLNSDGF 260 (442)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhccCccCCCCC--cHHHHHHHHHHhcCCCcccCCcchheeeeccCCccc
Confidence 334444444556777776666555543321 1223 445554443 555544 3467888899999999
Q ss_pred eeHHHHHHHHHhhc----cCcchhHH--------H---HHHhhhhCCCCCCcccHHHHHHHHHHh
Q 008641 445 ITFKQFLYASAHVM----KLPLFWQA--------C---ELAFAECDPDGNGFISENQLEVTIRPA 494 (558)
Q Consensus 445 Is~~Ef~~~~~~~~----~~~~~~~~--------~---~~~F~~~D~d~~G~Is~~E~~~~l~~~ 494 (558)
++-.|.-+++..-. .....++. + ..+.+..|.|.|..|+.+||.......
T Consensus 261 ldeqELEaLFtkELEKvYdpkNeeDDM~EmeEErlRMREHVMk~vDtNqDRlvtleEFL~~t~~k 325 (442)
T KOG3866|consen 261 LDEQELEALFTKELEKVYDPKNEEDDMKEMEEERLRMREHVMKQVDTNQDRLVTLEEFLNDTDNK 325 (442)
T ss_pred ccHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHhcccchhhhhhHHHHHhhhhhc
Confidence 99888877654322 11111111 1 245678899999999999998776543
No 196
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=76.72 E-value=5 Score=34.90 Aligned_cols=69 Identities=10% Similarity=0.125 Sum_probs=37.6
Q ss_pred CCcccHHHHHHHhcc--CCcHHHHHHHhhhcCCC-------CCceeHHHHHHHHHhhccCcchhHHHHHHhhhhCCCC
Q 008641 410 SGCVKLLDFLSVLRL--KTCPLSDEIFGFIDVDK-------NGSITFKQFLYASAHVMKLPLFWQACELAFAECDPDG 478 (558)
Q Consensus 410 ~G~Is~~ef~~~l~~--~~~~~~~~lf~~~D~d~-------~g~Is~~Ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~ 478 (558)
-+.++.+||.++-.. ..+..++.+.+.|..+| .+.|+|+.|..+|.........++-++.+|..|-...
T Consensus 5 ~~~lsp~eF~qLq~y~eys~kklkdvl~eF~~~g~~~~~~~~~~Id~egF~~Fm~~yLe~d~P~~lc~hLF~sF~~~~ 82 (138)
T PF14513_consen 5 WVSLSPEEFAQLQKYSEYSTKKLKDVLKEFHGDGSLAKYNPEEPIDYEGFKLFMKTYLEVDLPEDLCQHLFLSFQKKP 82 (138)
T ss_dssp -S-S-HHHHHHHHHHHHH----HHHHHHHH-HTSGGGGGEETTEE-HHHHHHHHHHHTT-S--HHHHHHHHHHS----
T ss_pred eeccCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHcCCCCHHHHHHHHHHHhCcc
Confidence 456777777444321 23334566666664333 4689999999999888776666888899998886554
No 197
>PLN02952 phosphoinositide phospholipase C
Probab=75.27 E-value=12 Score=40.92 Aligned_cols=84 Identities=11% Similarity=-0.060 Sum_probs=58.0
Q ss_pred CCCcccHHHHHHHhcc------CCcHHHHHHHhhhcCCCCCceeHHHHHHHHHhhccCc-chhHHHHHHhhhh-------
Q 008641 409 PSGCVKLLDFLSVLRL------KTCPLSDEIFGFIDVDKNGSITFKQFLYASAHVMKLP-LFWQACELAFAEC------- 474 (558)
Q Consensus 409 ~~G~Is~~ef~~~l~~------~~~~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~-~~~~~~~~~F~~~------- 474 (558)
+.|.+++++|...... .+.+++..+|..+-.++ +.++.++|..++...++.. .+.+.+..++..+
T Consensus 13 ~~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~~~-~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~~~~~~~~~~~ 91 (599)
T PLN02952 13 DSGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSVGG-GHMGADQLRRFLVLHQDELDCTLAEAQRIVEEVINRRHHV 91 (599)
T ss_pred cCCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhCCC-CccCHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHhhcccc
Confidence 4689999999654432 23458999999996544 6899999999998887654 2345555555433
Q ss_pred CCCCCCcccHHHHHHHHHH
Q 008641 475 DPDGNGFISENQLEVTIRP 493 (558)
Q Consensus 475 D~d~~G~Is~~E~~~~l~~ 493 (558)
...+.+.++.+.|..+|..
T Consensus 92 ~~~~~~~l~~~~F~~~l~s 110 (599)
T PLN02952 92 TRYTRHGLNLDDFFHFLLY 110 (599)
T ss_pred ccccccCcCHHHHHHHHcC
Confidence 1123456899999998853
No 198
>PF08414 NADPH_Ox: Respiratory burst NADPH oxidase; InterPro: IPR013623 This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism. It tends to occur to the N terminus of an EF-hand (IPR002048 from INTERPRO), which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants []. ; GO: 0004601 peroxidase activity, 0050664 oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor, 0055114 oxidation-reduction process; PDB: 3A8R_A.
Probab=74.77 E-value=6 Score=31.93 Aligned_cols=63 Identities=17% Similarity=0.207 Sum_probs=44.6
Q ss_pred HHHHHHHHHHhhCCCCCCcccHHHHHHHhccCCcH-HHHHHHhhhcCC---CCCceeHHHHHHHHHhhc
Q 008641 394 EAVNFLEKFLSMNPDPSGCVKLLDFLSVLRLKTCP-LSDEIFGFIDVD---KNGSITFKQFLYASAHVM 458 (558)
Q Consensus 394 ~~~~~~~~F~~~D~d~~G~Is~~ef~~~l~~~~~~-~~~~lf~~~D~d---~~g~Is~~Ef~~~~~~~~ 458 (558)
....++..|..+-. +|.+...+|.+.+|+..++ ...++|+.+-.. ..+.|+.+|+..++..+.
T Consensus 28 ~W~~VE~RFd~La~--dG~L~rs~Fg~CIGM~dSkeFA~eLFdALaRrr~i~~~~I~k~eL~efW~qis 94 (100)
T PF08414_consen 28 GWKEVEKRFDKLAK--DGLLPRSDFGECIGMKDSKEFAGELFDALARRRGIKGDSITKDELKEFWEQIS 94 (100)
T ss_dssp -HHHHHHHHHHH-B--TTBEEGGGHHHHHT--S-HHHHHHHHHHHHHHTT--SSEE-HHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCc--CCcccHHHHHHhcCCcccHHHHHHHHHHHHHhcCCccCCcCHHHHHHHHHHhh
Confidence 46778888999875 8999999999999998654 677888776432 246799999988886654
No 199
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=73.61 E-value=3.1 Score=31.45 Aligned_cols=57 Identities=14% Similarity=0.096 Sum_probs=37.0
Q ss_pred HHHHHHHHHhhCCCCCCcccHHHHHHHhccCCcHHHHHHHhhhc-C---CCCCceeHHHHHH
Q 008641 395 AVNFLEKFLSMNPDPSGCVKLLDFLSVLRLKTCPLSDEIFGFID-V---DKNGSITFKQFLY 452 (558)
Q Consensus 395 ~~~~~~~F~~~D~d~~G~Is~~ef~~~l~~~~~~~~~~lf~~~D-~---d~~g~Is~~Ef~~ 452 (558)
.+++.+.|+.+ .++.++||.+||.+.|--...+.+.+-+..+. . ...|.++|..|..
T Consensus 5 ~eqv~~aFr~l-A~~KpyVT~~dLr~~l~pe~aey~~~~Mp~~~~~~~~~~~~~~DY~~f~~ 65 (69)
T PF08726_consen 5 AEQVEEAFRAL-AGGKPYVTEEDLRRSLTPEQAEYCISRMPPYEGPDGDAIPGAYDYESFTN 65 (69)
T ss_dssp CHHHHHHHHHH-CTSSSCEEHHHHHHHS-CCCHHHHHCCSEC--SSS----TTEEECHHHHC
T ss_pred HHHHHHHHHHH-HcCCCcccHHHHHHHcCcHHHHHHHHHCcccCCCCcCCCCCCcCHHHHHH
Confidence 35678899999 77889999999998875544444433333332 1 1236788888864
No 200
>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=73.54 E-value=21 Score=30.66 Aligned_cols=96 Identities=11% Similarity=0.138 Sum_probs=47.4
Q ss_pred HHHhhccccccChHHHHHHHHHHHhhCCCC--CCcccHHHHHHHhccCCcHHHHHHHhhhcCCCCCceeHH--HHHHHHH
Q 008641 380 EMARVGSIFHISSLEAVNFLEKFLSMNPDP--SGCVKLLDFLSVLRLKTCPLSDEIFGFIDVDKNGSITFK--QFLYASA 455 (558)
Q Consensus 380 e~~~~~~~~~lt~~~~~~~~~~F~~~D~d~--~G~Is~~ef~~~l~~~~~~~~~~lf~~~D~d~~g~Is~~--Ef~~~~~ 455 (558)
++..+++...+.--+...+.++|.....+. +..++..|+...+ ..+|........+..+.. ....+.
T Consensus 25 KLR~lQk~~~l~lv~l~~v~~~f~~~~l~~~~d~~l~v~~l~~~L--------~~iy~~l~~~~p~~~~i~~~~v~~a~- 95 (127)
T PF09068_consen 25 KLRFLQKRLCLDLVDLSNVIEAFREHGLNQSNDSSLSVSQLETLL--------SSIYEFLNKRLPTLHQIPSRPVDLAV- 95 (127)
T ss_dssp HHHHHHHHTTGGG--HHHHHHHHHHTT---T-TSEEEHHHHHHHH--------HHHHHHHHHHSTTS--HH-----HHH-
T ss_pred HHHHHHHHHhheeeeHHHHHHHHHHcCCCcccCCCCCHHHHHHHH--------HHHHHHHHHHCCCCCCCCchhHHHHH-
Confidence 344455556666667777788888775443 3567777776554 344433332222222221 000000
Q ss_pred hhccCcchhHHHHHHhhhhCCCCCCcccHHHHHHHHH
Q 008641 456 HVMKLPLFWQACELAFAECDPDGNGFISENQLEVTIR 492 (558)
Q Consensus 456 ~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~ 492 (558)
+--+..++..||.+++|.|+.-+++..+.
T Consensus 96 --------~L~ln~Ll~vyD~~rtG~I~vls~KvaL~ 124 (127)
T PF09068_consen 96 --------DLLLNWLLNVYDSQRTGKIRVLSFKVALI 124 (127)
T ss_dssp --------HHHHHHHHHHH-TT--SEEEHHHHHHHHH
T ss_pred --------HHHHHHHHHHhCCCCCCeeehhHHHHHHH
Confidence 12245566778888888888877777664
No 201
>KOG4321 consensus Predicted phosphate acyltransferases [Lipid transport and metabolism]
Probab=71.48 E-value=8.8 Score=33.96 Aligned_cols=112 Identities=18% Similarity=0.186 Sum_probs=72.0
Q ss_pred EEccccC-CCCCCCEEEeCCCC-chhHHHHhhhc--cc----ceeeccccCCCCHHHHHHHhcceEEEecCCccchHHHH
Q 008641 165 RRKGKPA-PRQIAPIVVSNHIS-YIEPIFFFYEL--FP----TIVASESHDSIPFVGTIIRAMQVIYVDRFSQSSRKNAV 236 (558)
Q Consensus 165 ~~~g~~~-~~~~~~iivsNH~S-~~D~~~l~~~~--~p----~~v~k~~l~~~p~~g~~~~~~g~i~v~r~~~~~~~~~~ 236 (558)
.+.|.++ +.++|.++|--|-. .+|..++-... .. ..+...-+++.|-+|.+-.+.. |. ....
T Consensus 33 eviglenvpqegpalivyyhgaipidmyylnsrmllqrerliytigdrflfklpgwgtiseafh---vs-------pgtv 102 (279)
T KOG4321|consen 33 EVIGLENVPQEGPALIVYYHGAIPIDMYYLNSRMLLQRERLIYTIGDRFLFKLPGWGTISEAFH---VS-------PGTV 102 (279)
T ss_pred eEeecccCCCcCceEEEEEcCccceeeeeechHHHHhhhhheEeecceeEEeCCCccchhhhhc---cC-------CccH
Confidence 4455555 66778888888854 67743332221 11 3466677889998888877663 11 2345
Q ss_pred HHHHHHHhcCCCCeEEEeeCceecCC--Cc----c----cccccccccCCCceeEEEEEccC
Q 008641 237 SEIKRKASCDRFPRVLLFPEGTTTNG--KF----L----ISFQLGAFIPAYPIQPVIVRYPH 288 (558)
Q Consensus 237 ~~~~~~l~~~~~~~l~iFPEGt~s~~--~~----l----l~Fk~Gaf~~~~pI~Pv~i~y~~ 288 (558)
+.+...+.+|+ -+.|-|-|..... .. + ..|-+-|.++.+||+|+.-..-+
T Consensus 103 qscvsilrdgn--llaispggvyeaqfgdhyyellwrnrvgfakvaieakapiipcftqnlr 162 (279)
T KOG4321|consen 103 QSCVSILRDGN--LLAISPGGVYEAQFGDHYYELLWRNRVGFAKVAIEAKAPIIPCFTQNLR 162 (279)
T ss_pred HHHHHhhccCc--EEEEcCCceeeeccchHHHHHHHhccccceeeeeecCCCccchhHHHHH
Confidence 56777888888 8899998877532 21 1 23444477899999999765433
No 202
>PRK04974 glycerol-3-phosphate acyltransferase; Validated
Probab=69.77 E-value=27 Score=39.99 Aligned_cols=51 Identities=14% Similarity=0.130 Sum_probs=30.4
Q ss_pred CCCCccHHHHHHHHhccccceEEEEEecccCCCcc--cccCHHHHHHHHHHHHH
Q 008641 294 SWGDVSLGKLMFRMFTQFHNFMEVEYLPVVFPSDN--QKENALRFAERTSHAMA 345 (558)
Q Consensus 294 ~w~~~~~~~~~~~~~~~~~~~~~v~~l~pi~~~~~--~~~~~~~~~~~v~~~i~ 345 (558)
.|...+++..++.++.. +...-|+|.+|++.... +..+.+.++..+.+...
T Consensus 147 ~~~~p~~~~k~~~il~~-gR~~~v~fs~p~slr~~~~~~~~~~~~a~kl~r~a~ 199 (818)
T PRK04974 147 NWAVPGRLRKLFAILWL-GRDTFVRFSPPVSLRYMADEHGTDKRIARKLARVAR 199 (818)
T ss_pred ccccchHHHHHHHHHhh-ccccEEEecCcccHHHHHhhcCCcHHHHHHHHHHHH
Confidence 46555666666666655 55668999999986421 23444555544444333
No 203
>KOG0035 consensus Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=69.43 E-value=20 Score=40.77 Aligned_cols=97 Identities=11% Similarity=0.007 Sum_probs=70.0
Q ss_pred HHHHHHHhhhcCCCCCceeHHHHHHHHHhhccCcchh-HHHHHHh---hhhCCCCCCcccHHHHHHHHHHhCCCC-cHHH
Q 008641 428 PLSDEIFGFIDVDKNGSITFKQFLYASAHVMKLPLFW-QACELAF---AECDPDGNGFISENQLEVTIRPAIPDL-NKYE 502 (558)
Q Consensus 428 ~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~~~-~~~~~~F---~~~D~d~~G~Is~~E~~~~l~~~~~~~-~~~~ 502 (558)
.+++.+|+.+|....|..+.++|+.++.........+ .-+..+| ..-|.++.|.+++.++.+.|..--..+ ++..
T Consensus 747 ~ElrAle~~~~~~d~~aa~~e~~~~~Lmslg~~~e~ee~~~~e~~~lvn~~n~l~~~qv~~~e~~ddl~R~~e~l~~~~r 826 (890)
T KOG0035|consen 747 DELRALENEQDKIDGGAASPEELLRCLMSLGYNTEEEEQGIAEWFRLVNKKNPLIQGQVQLLEFEDDLEREYEDLDTELR 826 (890)
T ss_pred HHHHHHHhHHHHhhcccCCHHHHHHHHHhcCcccchhHHHHHHHHHHHhccCcccccceeHHHHHhHhhhhhhhhcHHHH
Confidence 3688999999999999999999999988776655432 2333444 444666779999999999988755433 3445
Q ss_pred HHHHHHHhCCCCCCceeHHHHHH
Q 008641 503 IDSLFRLFDSDGDGRVSRDDFIC 525 (558)
Q Consensus 503 i~~lf~~~D~d~dG~Is~~eF~~ 525 (558)
+-..|+.+-+++. +|..+|++.
T Consensus 827 ~i~s~~d~~ktk~-~lL~eEL~~ 848 (890)
T KOG0035|consen 827 AILAFEDWAKTKA-YLLLEELVR 848 (890)
T ss_pred HHHHHHHHHcchh-HHHHHHHHh
Confidence 6666776665543 688888776
No 204
>PF04028 DUF374: Domain of unknown function (DUF374); InterPro: IPR007172 This is a bacterial domain of unknown function.
Probab=69.18 E-value=15 Score=28.25 Aligned_cols=51 Identities=12% Similarity=0.185 Sum_probs=42.4
Q ss_pred CCCHHHHHHHhcceEEEecCCccchHHHHHHHHHHHhcCCCCeEEEeeCceec
Q 008641 208 SIPFVGTIIRAMQVIYVDRFSQSSRKNAVSEIKRKASCDRFPRVLLFPEGTTT 260 (558)
Q Consensus 208 ~~p~~g~~~~~~g~i~v~r~~~~~~~~~~~~~~~~l~~~~~~~l~iFPEGt~s 260 (558)
.--++..+++.+|.-.|.-++.+.-.+++.++.+.+++|. .++|-|.|-+.
T Consensus 21 DGe~ia~~~~~~G~~~iRGSs~rgg~~Alr~~~~~lk~G~--~~~itpDGPrG 71 (74)
T PF04028_consen 21 DGELIARVLERFGFRTIRGSSSRGGARALREMLRALKEGY--SIAITPDGPRG 71 (74)
T ss_pred CHHHHHHHHHHcCCCeEEeCCCCcHHHHHHHHHHHHHCCC--eEEEeCCCCCC
Confidence 3356788889999888877777777899999999999887 99999998654
No 205
>KOG2243 consensus Ca2+ release channel (ryanodine receptor) [Signal transduction mechanisms]
Probab=68.68 E-value=20 Score=42.07 Aligned_cols=56 Identities=20% Similarity=0.306 Sum_probs=44.4
Q ss_pred HHHhhCCCCCCcccHHHHHHHhcc---CCcHHHHHHHhhhcCCCCCceeHHHHHHHHHh
Q 008641 401 KFLSMNPDPSGCVKLLDFLSVLRL---KTCPLSDEIFGFIDVDKNGSITFKQFLYASAH 456 (558)
Q Consensus 401 ~F~~~D~d~~G~Is~~ef~~~l~~---~~~~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~ 456 (558)
.|..+|+|+.|.|+..||.+++.- ....++.-+..-...|.+...+|++|..-+..
T Consensus 4062 tfkeydpdgkgiiskkdf~kame~~k~ytqse~dfllscae~dend~~~y~dfv~rfhe 4120 (5019)
T KOG2243|consen 4062 TFKEYDPDGKGIISKKDFHKAMEGHKHYTQSEIDFLLSCAEADENDMFDYEDFVDRFHE 4120 (5019)
T ss_pred cchhcCCCCCccccHHHHHHHHhccccchhHHHHHHHHhhccCccccccHHHHHHHhcC
Confidence 478899999999999999888842 22236777777788888899999999876543
No 206
>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]
Probab=66.92 E-value=11 Score=40.38 Aligned_cols=91 Identities=13% Similarity=0.115 Sum_probs=56.5
Q ss_pred ccccChHHHHHHHHHHHhhCCCCCCcccHHHHHHHhccCCcHH-HHHHHh-hhcCCCCCceeHHHHHHHHHhhccCcchh
Q 008641 387 IFHISSLEAVNFLEKFLSMNPDPSGCVKLLDFLSVLRLKTCPL-SDEIFG-FIDVDKNGSITFKQFLYASAHVMKLPLFW 464 (558)
Q Consensus 387 ~~~lt~~~~~~~~~~F~~~D~d~~G~Is~~ef~~~l~~~~~~~-~~~lf~-~~D~d~~g~Is~~Ef~~~~~~~~~~~~~~ 464 (558)
...|+..-+..+..+|..+|.|+||.++.+|+..++...+... ....+. ..-.+..|.+++.-|+..+..........
T Consensus 306 s~ELs~~~~~Fl~~~f~~~D~d~Dg~L~p~El~~LF~~~P~~pW~~~~~~~~t~~~~~G~ltl~g~l~~WsL~Tlld~~~ 385 (625)
T KOG1707|consen 306 SVELSPKGYRFLVDVFEKFDRDNDGALSPEELKDLFSTAPGSPWTSSPYKDSTVKNERGWLTLNGFLSQWSLMTLLDPRR 385 (625)
T ss_pred ceeccHHHHHHHHHHHHhccCCCCCCcCHHHHHHHhhhCCCCCCCCCcccccceecccceeehhhHHHHHHHHhhccHHH
Confidence 3568888899999999999999999999999988874322110 000000 00123568999999998776543322222
Q ss_pred HHHHHHhhhhCCC
Q 008641 465 QACELAFAECDPD 477 (558)
Q Consensus 465 ~~~~~~F~~~D~d 477 (558)
-.-..+|--|..+
T Consensus 386 t~~~L~Ylgf~~~ 398 (625)
T KOG1707|consen 386 TLEYLAYLGFPTD 398 (625)
T ss_pred HHHHHHhcCCccc
Confidence 2223344445444
No 207
>KOG0998 consensus Synaptic vesicle protein EHS-1 and related EH domain proteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=66.62 E-value=4.7 Score=46.28 Aligned_cols=137 Identities=19% Similarity=0.253 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHhhCCCCCCcccHHHHHHHhccC-C-cHHHHHHHhhhcCCCCCceeHHHHHHHHHhhccCc---------
Q 008641 393 LEAVNFLEKFLSMNPDPSGCVKLLDFLSVLRLK-T-CPLSDEIFGFIDVDKNGSITFKQFLYASAHVMKLP--------- 461 (558)
Q Consensus 393 ~~~~~~~~~F~~~D~d~~G~Is~~ef~~~l~~~-~-~~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~--------- 461 (558)
.....+...|+..|..++|.|+-.+-...+... . ...+-+++...|..+.|.++..+|...++......
T Consensus 8 ~~q~~~~~~~~~~d~~~~G~i~g~~a~~f~~~s~L~~qvl~qiws~~d~~~~g~l~~q~f~~~lrlva~aq~~~~~~~~~ 87 (847)
T KOG0998|consen 8 PGQPLFDQYFKSADPQGDGRITGAEAVAFLSKSGLPDQVLGQIWSLADSSGKGFLNRQGFYAALRLVAQAQSGRELSAKK 87 (847)
T ss_pred CccchHHHhhhccCcccCCcccHHHhhhhhhccccchhhhhccccccccccCCccccccccccchHhhhhhcccCcCccc
Confidence 334567888999999999999999887666432 2 23667788888999999999999987765432100
Q ss_pred --------------------------------------chhHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCcHHHH
Q 008641 462 --------------------------------------LFWQACELAFAECDPDGNGFISENQLEVTIRPAIPDLNKYEI 503 (558)
Q Consensus 462 --------------------------------------~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~i 503 (558)
....+...+|+.+... +|.++-+..+.++... .++-+-+
T Consensus 88 ~~~~~~~pp~~~~~~~~~~~~~~~~~~s~~~~~p~~~~qe~aky~q~f~s~~p~-~g~~sg~~~~pil~~s--~Lp~~~l 164 (847)
T KOG0998|consen 88 VLPASAVPPPPKISHDTSPPSRPSSSTSAAPFVPAITPQEQAKYDQIFRSLSPS-NGLLSGDKAKPILLNS--KLPSDVL 164 (847)
T ss_pred cccccCCCCCCccCccCCCcccCCCCCCCcccCCCCCHHHHHHHHHHHhccCCC-CCccccchhhhhhhcC--CCChhhh
Confidence 0012455667777765 6888888888887654 4777788
Q ss_pred HHHHHHhCCCCCCceeHHHHHHHHHhCcc
Q 008641 504 DSLFRLFDSDGDGRVSRDDFICCLRKNPL 532 (558)
Q Consensus 504 ~~lf~~~D~d~dG~Is~~eF~~~l~~~~~ 532 (558)
..++...|.|.+|.++..||.-.|.-...
T Consensus 165 ~~iw~l~d~d~~g~Ld~~ef~~am~l~~~ 193 (847)
T KOG0998|consen 165 GRIWELSDIDKDGNLDRDEFAVAMHLIND 193 (847)
T ss_pred ccccccccccccCCCChhhhhhhhhHHHH
Confidence 88999999999999999999877765433
No 208
>TIGR01848 PHA_reg_PhaR polyhydroxyalkanoate synthesis repressor PhaR. Poly-B-hydroxyalkanoates are lipidlike carbon/energy storage polymers found in granular inclusions. PhaR is a regulatory protein found in general near other proteins associated with polyhydroxyalkanoate (PHA) granule biosynthesis and utilization. It is found to be a DNA-binding homotetramer that is also capable of binding short chain hydroxyalkanoic acids and PHA granules. PhaR may regulate the expression of itself, of the phasins that coat granules, and of enzymes that direct carbon flux into polymers stored in granules.
Probab=64.91 E-value=18 Score=29.71 Aligned_cols=73 Identities=14% Similarity=0.132 Sum_probs=46.9
Q ss_pred hhhCCCCCCcccHHHHHHHHHH----------hCCCCcHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCcchHH-HHhhh
Q 008641 472 AECDPDGNGFISENQLEVTIRP----------AIPDLNKYEIDSLFRLFDSDGDGRVSRDDFICCLRKNPLLIA-IFSPT 540 (558)
Q Consensus 472 ~~~D~d~~G~Is~~E~~~~l~~----------~~~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~~~~~~~~-~~~~~ 540 (558)
+.||...+-+|+.++++++++. .|+.++..-+-+++-+-..++...++-+=+.++++-..+... .+..|
T Consensus 10 RLYDT~tS~YITLedi~~lV~~g~~f~V~DakTgeDiT~~iL~QII~E~E~~g~~~lp~~~L~qlIr~yg~~~q~~~~~y 89 (107)
T TIGR01848 10 RLYDTETSSYVTLEDIRDLVREGREFQVVDSKSGDDLTRSILLQIIAEEESGGEPVLSTDFLTQIIRFYGGSMQSFVPQY 89 (107)
T ss_pred cccCCCccceeeHHHHHHHHHCCCeEEEEECCCCchhHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHhChhHHHHHHHH
Confidence 4677777778888888887764 245666666777777666666666777766666666555333 33344
Q ss_pred ccCC
Q 008641 541 LLHT 544 (558)
Q Consensus 541 l~~~ 544 (558)
+.+.
T Consensus 90 Le~s 93 (107)
T TIGR01848 90 LEAS 93 (107)
T ss_pred HHHH
Confidence 5443
No 209
>PF08976 DUF1880: Domain of unknown function (DUF1880); InterPro: IPR015070 This entry represents EF-hand calcium-binding domain-containing protein 6 that negatively regulates the androgen receptor by recruiting histone deacetylase complex, and protein DJ-1 antagonises this inhibition by abrogation of this complex [].; PDB: 1WLZ_C.
Probab=63.18 E-value=6.6 Score=32.71 Aligned_cols=32 Identities=19% Similarity=0.435 Sum_probs=23.5
Q ss_pred CcHHHHHHHHHHhCCCCCCceeHHHHHHHHHh
Q 008641 498 LNKYEIDSLFRLFDSDGDGRVSRDDFICCLRK 529 (558)
Q Consensus 498 ~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~~ 529 (558)
+++++++.++.++-.|..|.|.|.||+.-+..
T Consensus 4 LtDeQFdrLW~e~Pvn~~GrLkY~eFL~kfs~ 35 (118)
T PF08976_consen 4 LTDEQFDRLWNEMPVNAKGRLKYQEFLSKFSS 35 (118)
T ss_dssp --HHHHHHHHTTS-B-TTS-EEHHHHHHHT--
T ss_pred ccHHHhhhhhhhCcCCccCCEeHHHHHHHccc
Confidence 78999999999999999999999999876653
No 210
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=61.22 E-value=37 Score=30.26 Aligned_cols=58 Identities=26% Similarity=0.318 Sum_probs=38.4
Q ss_pred HHHhhCCCCCCcccHHHHHHHhc---c---CCc-HHHHHHHhhhcCCCCCceeHHHHHHHHHhhc
Q 008641 401 KFLSMNPDPSGCVKLLDFLSVLR---L---KTC-PLSDEIFGFIDVDKNGSITFKQFLYASAHVM 458 (558)
Q Consensus 401 ~F~~~D~d~~G~Is~~ef~~~l~---~---~~~-~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~ 458 (558)
.|..|-..+...|+-..|.+++. + ..+ ..+.-+|..+-..+..+|+|++|+.++..+.
T Consensus 7 ~f~~fG~~~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~~lA 71 (154)
T PF05517_consen 7 AFASFGKKNGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAKGARKITFEQFLEALAELA 71 (154)
T ss_dssp HHHCSSTSTSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHHHHHH
T ss_pred HHHHhcCCccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcCCCcccCHHHHHHHHHHHH
Confidence 34444455667789999977763 1 222 2678888887666667899999998886553
No 211
>KOG1265 consensus Phospholipase C [Lipid transport and metabolism]
Probab=58.35 E-value=1.2e+02 Score=34.43 Aligned_cols=85 Identities=19% Similarity=0.187 Sum_probs=63.9
Q ss_pred CCCcccHHHH-----HHHhc-cCCcHHHHHHHhhhcCCCCCceeHHHHHHHHHhhccCcc---------hhHHHHHHhhh
Q 008641 409 PSGCVKLLDF-----LSVLR-LKTCPLSDEIFGFIDVDKNGSITFKQFLYASAHVMKLPL---------FWQACELAFAE 473 (558)
Q Consensus 409 ~~G~Is~~ef-----~~~l~-~~~~~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~---------~~~~~~~~F~~ 473 (558)
++..|..++| ..++. +.+..+++++|..+..++...+|.+++..++...+.... ....+..+.+.
T Consensus 196 k~dsI~~d~f~~e~f~~~l~klcpR~eie~iF~ki~~~~kpylT~~ql~dfln~~QrDpRLNeilfp~~~~~r~~~liek 275 (1189)
T KOG1265|consen 196 KNDSIEPDDFTLEKFYRLLNKLCPRPEIEEIFRKISGKKKPYLTKEQLVDFLNKKQRDPRLNEILFPPADPRRIQSLIEK 275 (1189)
T ss_pred CcCccChhhccHHHHHHHHHhcCCchhHHHHHHHhccCCCccccHHHHHHHHhhhccCcchhhhhcCCCCHHHHHHHHHH
Confidence 3445666665 45553 455579999999999998899999999999987665432 24577888888
Q ss_pred hCCCC----CCcccHHHHHHHHHH
Q 008641 474 CDPDG----NGFISENQLEVTIRP 493 (558)
Q Consensus 474 ~D~d~----~G~Is~~E~~~~l~~ 493 (558)
|..|+ +|.++.+-|...+..
T Consensus 276 yEp~~~~a~~gqms~dgf~ryl~g 299 (1189)
T KOG1265|consen 276 YEPNSDNAEKGQMSTDGFVRYLMG 299 (1189)
T ss_pred cCCchhhhhccccchhhhHHHhhC
Confidence 86664 689999999998853
No 212
>KOG1264 consensus Phospholipase C [Lipid transport and metabolism]
Probab=57.38 E-value=62 Score=36.30 Aligned_cols=140 Identities=14% Similarity=0.183 Sum_probs=83.5
Q ss_pred ccChHHHHH-HHHHHHhhCCCCCCcccHHHHHHHhccCCc-----HHHHHHHhhhcCCCCCceeHHHHHHHHHhhccCcc
Q 008641 389 HISSLEAVN-FLEKFLSMNPDPSGCVKLLDFLSVLRLKTC-----PLSDEIFGFIDVDKNGSITFKQFLYASAHVMKLPL 462 (558)
Q Consensus 389 ~lt~~~~~~-~~~~F~~~D~d~~G~Is~~ef~~~l~~~~~-----~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~ 462 (558)
..++.++.. ++..+-..|......|+..+++..|-.... ....+-|.. |..+++.++|++|..+...++....
T Consensus 136 a~~p~qI~~wlrk~~ysvd~~~~~~isard~k~~l~qvn~k~~~~kfl~e~~te-d~~~k~dlsf~~f~~ly~~lmfs~~ 214 (1267)
T KOG1264|consen 136 APTPLQIERWLRKQIYSVDQTRENSISARDLKTILPQVNFKVSSAKFLKEKFTE-DGARKDDLSFEQFHLLYKKLMFSQQ 214 (1267)
T ss_pred CCChHHHHHHHHhhheeccchhhhheeHHhhhcccccceEEechHHHHHHHHhH-hhhccccccHHHHHHHHHHHhhccc
Confidence 355666665 456677778777778999999888743222 244444444 3345677999999988877665432
Q ss_pred hhHHH--HHHh--hhhCCCCCCcccHHHHHHHHHHhCCCC---cHHHHHHHHHHhCCC-----CCCceeHHHHHHHHHh
Q 008641 463 FWQAC--ELAF--AECDPDGNGFISENQLEVTIRPAIPDL---NKYEIDSLFRLFDSD-----GDGRVSRDDFICCLRK 529 (558)
Q Consensus 463 ~~~~~--~~~F--~~~D~d~~G~Is~~E~~~~l~~~~~~~---~~~~i~~lf~~~D~d-----~dG~Is~~eF~~~l~~ 529 (558)
....+ ...| ..=|...--.+...||+++|....... ....++..+..|-.| ..-+++++||+.++-.
T Consensus 215 ~a~l~e~~~~~~~~~~~~~d~~vV~~~ef~rFL~~~Q~e~~Asdr~av~~~~r~F~~D~~re~~EPyl~v~EFv~fLFS 293 (1267)
T KOG1264|consen 215 KAILLEFKKDFILGNTDRPDASVVYLQEFQRFLIHEQQEHWASDRNAVREFMRKFIDDTMRETAEPYLFVDEFVTFLFS 293 (1267)
T ss_pred hhhhhcccchhhhcCCCCccceEeeHHHHHHHHHhhhHHHhhhHHHHHHHHHHHHHhhhhhhccCcceeHHHHHHHHhh
Confidence 11111 1111 111222235789999999997543222 122455555555333 2347999999998854
No 213
>KOG4004 consensus Matricellular protein Osteonectin/SPARC/BM-40 [Extracellular structures]
Probab=55.36 E-value=5.1 Score=36.52 Aligned_cols=55 Identities=18% Similarity=0.354 Sum_probs=28.2
Q ss_pred HhhhcCC-CCCceeHHHHHHHHHhhccCcchhHHHHHHhhhhCCCCCCcccHHHHHHHH
Q 008641 434 FGFIDVD-KNGSITFKQFLYASAHVMKLPLFWQACELAFAECDPDGNGFISENQLEVTI 491 (558)
Q Consensus 434 f~~~D~d-~~g~Is~~Ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l 491 (558)
|..+|.. -||.+|-.|...+-+.+.. .+.-....|..+|.|+||+|+.+|+...+
T Consensus 193 f~qld~~p~d~~~sh~el~pl~ap~ip---me~c~~~f~e~cd~~nd~~ial~ew~~c~ 248 (259)
T KOG4004|consen 193 FGQLDQHPIDGYLSHTELAPLRAPLIP---MEHCTTRFFETCDLDNDKYIALDEWAGCF 248 (259)
T ss_pred eccccCCCccccccccccccccCCccc---HHhhchhhhhcccCCCCCceeHHHhhccc
Confidence 4444443 3566666665444332221 12334555666666666666666665443
No 214
>PLN02222 phosphoinositide phospholipase C 2
Probab=55.30 E-value=33 Score=37.47 Aligned_cols=64 Identities=14% Similarity=0.131 Sum_probs=41.0
Q ss_pred hHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCC--CCcHHHHHHHHHHhCC-CCCCceeHHHHHHHHHh
Q 008641 464 WQACELAFAECDPDGNGFISENQLEVTIRPAIP--DLNKYEIDSLFRLFDS-DGDGRVSRDDFICCLRK 529 (558)
Q Consensus 464 ~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~--~~~~~~i~~lf~~~D~-d~dG~Is~~eF~~~l~~ 529 (558)
..++..+|..+-. ++.++.++|..+|..... ..+.+.+..+++.+.. ...+.++++.|..+|..
T Consensus 24 ~~ei~~if~~~~~--~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~gF~~yL~s 90 (581)
T PLN02222 24 PREIKTIFEKYSE--NGVMTVDHLHRFLIDVQKQDKATREDAQSIINSASSLLHRNGLHLDAFFKYLFG 90 (581)
T ss_pred cHHHHHHHHHhcC--CCCcCHHHHHHHHHHhcCCccCCHHHHHHHHHhhhhhhhccCcCHHHHHHHhcC
Confidence 3567777777753 357777777777766532 3456667777776532 23456778888777764
No 215
>KOG4286 consensus Dystrophin-like protein [Cell motility; Signal transduction mechanisms; Cytoskeleton]
Probab=55.23 E-value=95 Score=34.53 Aligned_cols=148 Identities=14% Similarity=0.176 Sum_probs=95.7
Q ss_pred HHhhccccccChHHHHHHHHHHHhhCCCCC-CcccHHHHHHHh-----------cc----CCc--HHHHHHHhhhcCCCC
Q 008641 381 MARVGSIFHISSLEAVNFLEKFLSMNPDPS-GCVKLLDFLSVL-----------RL----KTC--PLSDEIFGFIDVDKN 442 (558)
Q Consensus 381 ~~~~~~~~~lt~~~~~~~~~~F~~~D~d~~-G~Is~~ef~~~l-----------~~----~~~--~~~~~lf~~~D~d~~ 442 (558)
+.++.+.+.+.--...-..++|...+..++ ..++..+....| |. +.+ .-+.-+++.||...+
T Consensus 405 lr~LQK~l~ldlv~ltl~l~if~~h~l~~~~e~m~~~~~i~~L~~~y~~l~e~~g~~v~v~l~vD~~lN~llNvyD~~R~ 484 (966)
T KOG4286|consen 405 LRRLQKALCLDLLSLSLALDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHGNLVNVPLCVDMCLNWLLNVYDTGRT 484 (966)
T ss_pred HHHHHHHHHhccccHHHHHHHHHHhcccccCcCCCHHHHHHHHHHHHHHHHHHcccccccchHHHHHHHHHHHhcccCCC
Confidence 334444444444555667778888876543 445555554333 11 011 135667899999999
Q ss_pred CceeHHHHHHHHHhhccCcchhHHHHHHhhhhCCCCCCcccHHHHHHH-------HHHhCC------CCcHHHHHHHHHH
Q 008641 443 GSITFKQFLYASAHVMKLPLFWQACELAFAECDPDGNGFISENQLEVT-------IRPAIP------DLNKYEIDSLFRL 509 (558)
Q Consensus 443 g~Is~~Ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~-------l~~~~~------~~~~~~i~~lf~~ 509 (558)
|.|..-+|...+..+++... +++++.+|+....++.-.+ ...|..+ .+.+|+ .--+--++..|+.
T Consensus 485 g~irvls~ki~~i~lck~~l-eek~~ylF~~vA~~~sq~~-q~~l~lLL~dliqipr~lGE~aAfGgsNvepsvrsCF~~ 562 (966)
T KOG4286|consen 485 GRIRVLSFKIGIISLCKAHL-EDKYRYLFKQVASSTSQCD-QRRLGLLLHDLIQIPRQLGEVAAFGGSNIEPSVRSCFQF 562 (966)
T ss_pred cceEEeeehhhHHHHhcchh-HHHHHHHHHHHcCchhhHH-HHHHHHHHHHHHHHHHHHhHHHhhcCCCCChHHHHHHHh
Confidence 99999999999888887655 8889999999876665443 4444433 333332 2223446777773
Q ss_pred hCCCCCCceeHHHHHHHHHhCcc
Q 008641 510 FDSDGDGRVSRDDFICCLRKNPL 532 (558)
Q Consensus 510 ~D~d~dG~Is~~eF~~~l~~~~~ 532 (558)
.++--.|++..|...+...|.
T Consensus 563 --v~~~pei~~~~f~dw~~~epq 583 (966)
T KOG4286|consen 563 --VNNKPEIEAALFLDWMRLEPQ 583 (966)
T ss_pred --cCCCCcchHHHHHHHhccCcc
Confidence 345567999999999987765
No 216
>PLN02228 Phosphoinositide phospholipase C
Probab=53.26 E-value=46 Score=36.32 Aligned_cols=65 Identities=14% Similarity=0.085 Sum_probs=43.5
Q ss_pred hhHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCC--CCcHHHHHHHHHHhCCC----CCCceeHHHHHHHHHh
Q 008641 463 FWQACELAFAECDPDGNGFISENQLEVTIRPAIP--DLNKYEIDSLFRLFDSD----GDGRVSRDDFICCLRK 529 (558)
Q Consensus 463 ~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~--~~~~~~i~~lf~~~D~d----~dG~Is~~eF~~~l~~ 529 (558)
..+++..+|..+-.+ +.++.++|..+|..... ..+.+.+.+++..+... ..|.++.+.|..+|..
T Consensus 22 ~~~ei~~if~~~s~~--~~~t~~~~~~FL~~~Q~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~gF~~yl~s 92 (567)
T PLN02228 22 PPVSIKRLFEAYSRN--GKMSFDELLRFVSEVQGERHAGLDYVQDIFHSVKHHNVFHHHGLVHLNAFYRYLFS 92 (567)
T ss_pred CcHHHHHHHHHhcCC--CccCHHHHHHHHHHhcCCccCCHHHHHHHHHHhccchhhcccCccCHHHHHHHhcC
Confidence 356777788777533 46888888888776532 24556677777777532 2356888888887764
No 217
>PLN02230 phosphoinositide phospholipase C 4
Probab=49.37 E-value=57 Score=35.81 Aligned_cols=65 Identities=14% Similarity=0.062 Sum_probs=47.5
Q ss_pred hHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCC---CCcHHHHHHHHHHhCC-------CCCCceeHHHHHHHHHh
Q 008641 464 WQACELAFAECDPDGNGFISENQLEVTIRPAIP---DLNKYEIDSLFRLFDS-------DGDGRVSRDDFICCLRK 529 (558)
Q Consensus 464 ~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~---~~~~~~i~~lf~~~D~-------d~dG~Is~~eF~~~l~~ 529 (558)
..+++.+|..|-.++ +.++.++|.++|..... ..+.+++..++..+-. -+.+.++.+.|..+|..
T Consensus 28 ~~ei~~lf~~~s~~~-~~mt~~~l~~FL~~~Q~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~F~~yL~s 102 (598)
T PLN02230 28 VADVRDLFEKYADGD-AHMSPEQLQKLMAEEGGGEGETSLEEAERIVDEVLRRKHHIAKFTRRNLTLDDFNYYLFS 102 (598)
T ss_pred cHHHHHHHHHHhCCC-CccCHHHHHHHHHHhCCCcccCCHHHHHHHHHHHHhhccccccccccccCHHHHHHHHcC
Confidence 578899999986444 79999999999987652 3466777777765421 12456999999998866
No 218
>KOG1954 consensus Endocytosis/signaling protein EHD1 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=47.98 E-value=1.8e+02 Score=29.94 Aligned_cols=56 Identities=21% Similarity=0.373 Sum_probs=42.5
Q ss_pred HHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCcHHHHHHHHHHhCCCCCCceeHHHHH
Q 008641 466 ACELAFAECDPDGNGFISENQLEVTIRPAIPDLNKYEIDSLFRLFDSDGDGRVSRDDFI 524 (558)
Q Consensus 466 ~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D~d~dG~Is~~eF~ 524 (558)
....+|-.+..- +|+|+-..-+.-+.. .+++...+-++++..|.|.||.++-+||.
T Consensus 445 ~yde~fy~l~p~-~gk~sg~~ak~~mv~--sklpnsvlgkiwklad~d~dg~ld~eefa 500 (532)
T KOG1954|consen 445 TYDEIFYTLSPV-NGKLSGRNAKKEMVK--SKLPNSVLGKIWKLADIDKDGMLDDEEFA 500 (532)
T ss_pred chHhhhhccccc-CceeccchhHHHHHh--ccCchhHHHhhhhhhcCCcccCcCHHHHH
Confidence 355667666543 578876665555433 36888899999999999999999999995
No 219
>PF12174 RST: RCD1-SRO-TAF4 (RST) plant domain; InterPro: IPR022003 This domain is found in many plant proteins including SROs and RCD1s; it is required for interaction with multiple plant transcription factors.
Probab=47.64 E-value=18 Score=27.44 Aligned_cols=46 Identities=20% Similarity=0.334 Sum_probs=23.6
Q ss_pred cccHHHHHHHHHHhCCCCcHHHHHHHHHHhCCCCCCceeHHHHHHHHHh
Q 008641 481 FISENQLEVTIRPAIPDLNKYEIDSLFRLFDSDGDGRVSRDDFICCLRK 529 (558)
Q Consensus 481 ~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~~ 529 (558)
.+++..+..++... ++.+.++.+...|+.=..++|+.+||++.++.
T Consensus 8 ~~~F~~L~~~l~~~---l~~~~~~~l~~~Y~~~k~~kIsR~~fvr~lR~ 53 (70)
T PF12174_consen 8 WMPFPMLFSALSKH---LPPSKMDLLQKHYEEFKKKKISREEFVRKLRQ 53 (70)
T ss_pred cccHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 34444555555442 34444444444444444566666666665554
No 220
>PF04876 Tenui_NCP: Tenuivirus major non-capsid protein; InterPro: IPR006960 This entry contains the tenuivirus major non-capsid protein. Proteins accumulate in large amounts in tenuivirus infected cells. They are found in the inclusion bodies that are formed after infection [].
Probab=46.20 E-value=1.5e+02 Score=26.00 Aligned_cols=84 Identities=12% Similarity=0.154 Sum_probs=51.7
Q ss_pred HHHHHhhhcCCCCCceeHHHHHHHHHhhccCcchhHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCcHHHHHHHHHH
Q 008641 430 SDEIFGFIDVDKNGSITFKQFLYASAHVMKLPLFWQACELAFAECDPDGNGFISENQLEVTIRPAIPDLNKYEIDSLFRL 509 (558)
Q Consensus 430 ~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~i~~lf~~ 509 (558)
++.+...-|.+.+|.|++..|..++...++..-+ ..|= .+..++|.++++.++.. +++.
T Consensus 85 Lehllg~~~~~~n~~i~~~~ff~~lQ~~lGdWIT--------~~~L-kh~n~MSk~Qik~L~~~------------Ii~~ 143 (175)
T PF04876_consen 85 LEHLLGGEDDSTNGLIDIGKFFDILQPKLGDWIT--------KNFL-KHPNRMSKDQIKTLCEQ------------IIEM 143 (175)
T ss_pred HHHHhcCCcCCcccceeHHHHHHHHHHHhhhHHH--------HHHH-hccchhhHHHHHHHHHH------------HHHH
Confidence 4555555455567889999999999766553221 1111 23467888888877643 2333
Q ss_pred hCCCCCCceeHHHHHHHHHhCcchHHHH
Q 008641 510 FDSDGDGRVSRDDFICCLRKNPLLIAIF 537 (558)
Q Consensus 510 ~D~d~dG~Is~~eF~~~l~~~~~~~~~~ 537 (558)
+-.+ .++-+++....++.|.+....
T Consensus 144 akae---~~dtE~Ye~vwkKmPaY~~ni 168 (175)
T PF04876_consen 144 AKAE---SSDTEHYEKVWKKMPAYFSNI 168 (175)
T ss_pred Hhcc---CCchHHHHHHHHHhhHHHHHH
Confidence 3222 245677888888888877543
No 221
>KOG2419 consensus Phosphatidylserine decarboxylase [Lipid transport and metabolism]
Probab=45.18 E-value=17 Score=39.29 Aligned_cols=109 Identities=12% Similarity=0.150 Sum_probs=55.2
Q ss_pred HHHHHhhhcCCCCCceeHHHHHHHHHhhccCcchhHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCcHHHHHHHHHH
Q 008641 430 SDEIFGFIDVDKNGSITFKQFLYASAHVMKLPLFWQACELAFAECDPDGNGFISENQLEVTIRPAIPDLNKYEIDSLFRL 509 (558)
Q Consensus 430 ~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~i~~lf~~ 509 (558)
..+++..+|.+.++..+|.+|......+.... +..-...+ ||.+..+++...+-..|.+........++.+
T Consensus 439 ~~~~~s~~d~~~~fk~sf~~~~~l~~~F~~vv-----aa~~~~~~----D~~~~k~~~~~~lDl~g~~~~~~~~~~lYs~ 509 (975)
T KOG2419|consen 439 AKRILSIVDYEEDFKLSFSEFSDLSFAFGNVV-----AANKLAWF----DMLNEKEELFKALDLNGDPAHAPKQPVLYSY 509 (975)
T ss_pred hhhcccccccccCceEeeehHHHHHHHHHHHH-----Hhhhcchh----hhcccchhheehhhccCCcccCccccchhhh
Confidence 35556666777777777777765554432210 00001111 2344455555555544543333223333332
Q ss_pred h----CCCCCCceeHHHHHHHHHhCcchHHHHhhhccCCChh
Q 008641 510 F----DSDGDGRVSRDDFICCLRKNPLLIAIFSPTLLHTDLS 547 (558)
Q Consensus 510 ~----D~d~dG~Is~~eF~~~l~~~~~~~~~~~~~l~~~~~~ 547 (558)
. -.+.-|.++.+|.+.++...-..+-++.+.+.+.+++
T Consensus 510 vS~~~~~~s~~~vtVDe~v~ll~~~i~~V~~~~er~tq~~q~ 551 (975)
T KOG2419|consen 510 VSYPFLKKSFGVVTVDELVALLALDIIQVMLYLERLTQQEQE 551 (975)
T ss_pred ccccccccccCeeEHHHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 2 1234489999999999887654444444444444433
No 222
>PF05872 DUF853: Bacterial protein of unknown function (DUF853); InterPro: IPR008571 Members of this family have a P-loop containing nucleotide triphosphate hydrolases fold. This family is restricted to bacterial proteins, none of which have currently been characterised.
Probab=42.37 E-value=83 Score=33.22 Aligned_cols=47 Identities=13% Similarity=0.164 Sum_probs=26.7
Q ss_pred HHHHHh--hccccccChHHHHHHHHHHHhhCCCCCCcccHHHHHHHhcc
Q 008641 378 MVEMAR--VGSIFHISSLEAVNFLEKFLSMNPDPSGCVKLLDFLSVLRL 424 (558)
Q Consensus 378 l~e~~~--~~~~~~lt~~~~~~~~~~F~~~D~d~~G~Is~~ef~~~l~~ 424 (558)
+-||.- +.+..+|++.|.--+.-+|+..|.++---|+.+||+.+|..
T Consensus 108 vsemGPlLLsrlL~LNdtQ~gvL~i~F~~ADd~gLlLlDLkDLra~l~~ 156 (502)
T PF05872_consen 108 VSEMGPLLLSRLLELNDTQEGVLNIVFRIADDEGLLLLDLKDLRAMLQY 156 (502)
T ss_pred HHhhchHHHHHHhccchHHHHHHHHHHHHhccCCCccccHHHHHHHHHH
Confidence 344442 34455666666666666666666555555666666555543
No 223
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=42.32 E-value=1.3e+02 Score=24.11 Aligned_cols=26 Identities=19% Similarity=0.333 Sum_probs=16.5
Q ss_pred HHHHHHHHhhCCCCCCcccHHHHHHHh
Q 008641 396 VNFLEKFLSMNPDPSGCVKLLDFLSVL 422 (558)
Q Consensus 396 ~~~~~~F~~~D~d~~G~Is~~ef~~~l 422 (558)
++++-+|+.+ .|++|.++...|...|
T Consensus 3 dKyRylFsli-sd~~g~~~~~~l~~lL 28 (90)
T PF09069_consen 3 DKYRYLFSLI-SDSNGCMDQRKLGLLL 28 (90)
T ss_dssp HHHHHHHHHH-S-TTS-B-HHHHHHHH
T ss_pred HHHHHHHHHH-cCCCCCCcHHHHHHHH
Confidence 4567778877 5778888888876554
No 224
>PF07879 PHB_acc_N: PHB/PHA accumulation regulator DNA-binding domain; InterPro: IPR012909 This domain is found at the N terminus of the polyhydroxyalkanoate (PHA) synthesis regulators. These regulators have been shown to directly bind DNA and PHA []. The invariant nature of this domain compared to the C-terminal IPR007897 from INTERPRO domain(s) suggests that it contains the DNA-binding function.
Probab=42.15 E-value=47 Score=24.54 Aligned_cols=22 Identities=14% Similarity=0.315 Sum_probs=17.4
Q ss_pred hhhCCCCCCcccHHHHHHHHHH
Q 008641 472 AECDPDGNGFISENQLEVTIRP 493 (558)
Q Consensus 472 ~~~D~d~~G~Is~~E~~~~l~~ 493 (558)
+.||...+.+|+.++++++++.
T Consensus 10 RLYDT~~s~YiTL~di~~lV~~ 31 (64)
T PF07879_consen 10 RLYDTETSSYITLEDIAQLVRE 31 (64)
T ss_pred ccccCCCceeEeHHHHHHHHHC
Confidence 4678888888888888888765
No 225
>PF02459 Adeno_terminal: Adenoviral DNA terminal protein; InterPro: IPR003391 The genome of adenovirus contains a protein covalently bound to the 5' end of each strand of the linear DNA molecule []. Since adenovirus DNA replication is initiated at the termini of the DNA molecule it has been proposed that the terminal protein serves as the primer for initiation of replication. However, the priming function now appears to reside in the precursor form of the terminal protein (pTP) found on the 5' ends of nascent DNA strands replicated in vitro [, ] and as a component of DNA-protein complexes isolated from virions of the protease-deficient adenovirus serotype 2 (Ad2) mutant tsl. The pTP is encoded by the leftward-transcribed strand of the viral genome and comprises part of a transcription unit that also encodes the single-strand DNA binding protein [].; GO: 0003677 DNA binding, 0006260 DNA replication
Probab=41.71 E-value=2.7e+02 Score=29.90 Aligned_cols=160 Identities=16% Similarity=0.182 Sum_probs=81.4
Q ss_pred CHHHHHHHHHHHHHHhcCCcccCCchhhHHHHHHhhhhcccc-chhHHHHHHhhccccccChHHHHHHHHHHHhhCCCCC
Q 008641 332 NALRFAERTSHAMASALNAVQTSHAYGDLMLLMKASELKEEN-ASSYMVEMARVGSIFHISSLEAVNFLEKFLSMNPDPS 410 (558)
Q Consensus 332 ~~~~~~~~v~~~i~~~l~~~~~~~~~~d~~~~~~a~~~~~p~-~~~~l~e~~~~~~~~~lt~~~~~~~~~~F~~~D~d~~ 410 (558)
....|.++|+..+++++..+..+.+ ..|++-..++ ...|-.-+.+......++..-+.++.-.|=...- =.
T Consensus 326 e~~~f~~EV~~tv~e~I~~LqeELT-------~~AR~~~fFnFa~~FY~~l~rl~~~~~ite~~lRRWv~YFFv~EH-IA 397 (548)
T PF02459_consen 326 EEESFEEEVRRTVAEAIRLLQEELT-------VSARNHQFFNFAVDFYELLERLEDLGRITESFLRRWVMYFFVAEH-IA 397 (548)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhh-------hhhhhhhHHHhHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHH-HH
Confidence 3457999999999999988877766 2333322221 2233344445555555666655555444432100 00
Q ss_pred Cc--------ccHHHHHHHhccCCcHHHHHHHhhhcCCCCCceeH---------HHHHHHHHhhccCcchhHHHHHHhhh
Q 008641 411 GC--------VKLLDFLSVLRLKTCPLSDEIFGFIDVDKNGSITF---------KQFLYASAHVMKLPLFWQACELAFAE 473 (558)
Q Consensus 411 G~--------Is~~ef~~~l~~~~~~~~~~lf~~~D~d~~g~Is~---------~Ef~~~~~~~~~~~~~~~~~~~~F~~ 473 (558)
-+ .....|.+..++.. ++-++..-|. +|.+-| .-|..++..+ ...+...
T Consensus 398 sTL~YLh~~L~~n~~f~R~V~l~~---~QVimrgRd~--~G~~v~sRVW~e~~~~aF~~l~~RI---------~~Dl~~~ 463 (548)
T PF02459_consen 398 STLNYLHHRLRLNRPFRRYVELNL---AQVIMRGRDE--NGEVVYSRVWNENGINAFSQLMRRI---------SRDLLAT 463 (548)
T ss_pred HHHHHHHHHHHhhHHHHHhhhhhe---eeEEEEeecC--CCcchHHHHhhhcCccHHHHHHHHH---------HHHHHHH
Confidence 00 00001111111111 1112222233 233322 2244555433 3455567
Q ss_pred hCCCCCCcccHHHHHHHHHHhCCCCcHHHHHHHHHHhCCC
Q 008641 474 CDPDGNGFISENQLEVTIRPAIPDLNKYEIDSLFRLFDSD 513 (558)
Q Consensus 474 ~D~d~~G~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D~d 513 (558)
++.-|.|.++.+|..++|......-..-+++++++....|
T Consensus 464 verag~~~~~~ee~e~~l~dI~y~~nSGDv~eIL~Q~~~n 503 (548)
T PF02459_consen 464 VERAGRGELEEEEIEQFLADIAYRDNSGDVEEILRQAALN 503 (548)
T ss_pred HhccCcccCCHHHHHHHHHHhcccccCCCHHHHHHHhhcc
Confidence 7888888899999999998876544444566666665443
No 226
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=39.48 E-value=1e+02 Score=26.87 Aligned_cols=69 Identities=14% Similarity=0.090 Sum_probs=37.0
Q ss_pred CceeHHHHHHHHHhhccCcchhHHHHHHhhhhCCC-------CCCcccHHHHHHHHHHhCC-CCcHHHHHHHHHHhCCCC
Q 008641 443 GSITFKQFLYASAHVMKLPLFWQACELAFAECDPD-------GNGFISENQLEVTIRPAIP-DLNKYEIDSLFRLFDSDG 514 (558)
Q Consensus 443 g~Is~~Ef~~~~~~~~~~~~~~~~~~~~F~~~D~d-------~~G~Is~~E~~~~l~~~~~-~~~~~~i~~lf~~~D~d~ 514 (558)
+.+|-.||.++-.-.... ..+++.+.+.|..+ ..+.|+++.|+.+|+...+ .++++-...+|..|-...
T Consensus 6 ~~lsp~eF~qLq~y~eys---~kklkdvl~eF~~~g~~~~~~~~~~Id~egF~~Fm~~yLe~d~P~~lc~hLF~sF~~~~ 82 (138)
T PF14513_consen 6 VSLSPEEFAQLQKYSEYS---TKKLKDVLKEFHGDGSLAKYNPEEPIDYEGFKLFMKTYLEVDLPEDLCQHLFLSFQKKP 82 (138)
T ss_dssp S-S-HHHHHHHHHHHHH-------HHHHHHHH-HTSGGGGGEETTEE-HHHHHHHHHHHTT-S--HHHHHHHHHHS----
T ss_pred eccCHHHHHHHHHHHHHH---HHHHHHHHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHcCCCCHHHHHHHHHHHhCcc
Confidence 567777776653222111 12344444433222 2458999999999998754 688889999999997543
No 227
>PF01146 Caveolin: Caveolin; InterPro: IPR001612 Caveolins [, , ] are a family of integral membrane proteins which are the principal components of caveolae membranes. Cavoleae are flask-shaped plasma membrane invaginations whose exact cellular function is not yet clear. Caveolins may act as scaffolding proteins within caveolar membranes by compartmentalizing and concentrating signalling molecules. Various classes of signalling molecules, including G-protein subunits, receptor and non-receptor tyrosine kinases, endothelial nitric oxide synthase (eNOS), and small GTPases, bind Cav-1 through its 'caveolin-scaffolding domain'. Currently, three different forms of caveolins are known: caveolin-1 (or VIP21), caveolin-2 and caveolin-3 (or M-caveolin). Caveolins are proteins of about 20 Kd, they form high molecular mass homo-oligomers. Structurally they seem to have N-terminal and C-terminal hydrophilic segments and a long central transmembrane domain that probably forms a hairpin in the membrane. Both extremities are known to face the cytoplasm. Caveolae are enriched with cholesterol and Cav-1 is one of the few proteins that binds cholesterol tightly and specifically.
Probab=39.03 E-value=1.3e+02 Score=26.59 Aligned_cols=22 Identities=14% Similarity=0.517 Sum_probs=11.9
Q ss_pred HHHHHhhhhhHHHHHHHHHHHH
Q 008641 94 EFVKIVVCFPIVLIRLVLFGFC 115 (558)
Q Consensus 94 ~~~~~~l~~pl~~~r~~~~~~~ 115 (558)
..+-.++.+|++++..++++++
T Consensus 72 r~Ls~ilaiP~A~~~Gi~FA~l 93 (148)
T PF01146_consen 72 RILSLILAIPLAFLWGILFACL 93 (148)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455567666555555444
No 228
>PLN02228 Phosphoinositide phospholipase C
Probab=39.00 E-value=90 Score=34.12 Aligned_cols=55 Identities=13% Similarity=0.213 Sum_probs=28.5
Q ss_pred HHHHHHhhCCCCCCcccHHHHHHHhccC-----C-cHHHHHHHhhhcCC----CCCceeHHHHHHHH
Q 008641 398 FLEKFLSMNPDPSGCVKLLDFLSVLRLK-----T-CPLSDEIFGFIDVD----KNGSITFKQFLYAS 454 (558)
Q Consensus 398 ~~~~F~~~D~d~~G~Is~~ef~~~l~~~-----~-~~~~~~lf~~~D~d----~~g~Is~~Ef~~~~ 454 (558)
+..+|..+-. ++.++.++|.+.|... . .+.+.++++.+... ..|.++.+.|..++
T Consensus 26 i~~if~~~s~--~~~~t~~~~~~FL~~~Q~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~gF~~yl 90 (567)
T PLN02228 26 IKRLFEAYSR--NGKMSFDELLRFVSEVQGERHAGLDYVQDIFHSVKHHNVFHHHGLVHLNAFYRYL 90 (567)
T ss_pred HHHHHHHhcC--CCccCHHHHHHHHHHhcCCccCCHHHHHHHHHHhccchhhcccCccCHHHHHHHh
Confidence 3444555432 2467777776666321 1 12456666666432 23456666665554
No 229
>cd07313 terB_like_2 tellurium resistance terB-like protein, subgroup 2. This family includes several uncharacterized bacterial proteins. Protein sequence homology analysis shows they are similar to tellurium resistance protein terB, but the function of this family is unknown.
Probab=37.78 E-value=1.1e+02 Score=24.77 Aligned_cols=58 Identities=9% Similarity=0.044 Sum_probs=31.3
Q ss_pred HHHHHHhhhcCCCCCceeHHHHHHHHHhhccCcchhHHHHHHhhhhCCCCCCcccHHHHH
Q 008641 429 LSDEIFGFIDVDKNGSITFKQFLYASAHVMKLPLFWQACELAFAECDPDGNGFISENQLE 488 (558)
Q Consensus 429 ~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~ 488 (558)
+..+++..+....+...++.+|...+...+.......-+..+++..-. ||.++..|-.
T Consensus 38 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~L~~vA~A--DG~~~~~E~~ 95 (104)
T cd07313 38 EAAELLAEAEALEEEAPDLYEFTSLIKEHFDYEERLELVEALWEVAYA--DGELDEYEEH 95 (104)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh--cCCCCHHHHH
Confidence 344555555444445567778877766544222223445555555543 3667776643
No 230
>PF05099 TerB: Tellurite resistance protein TerB; InterPro: IPR007791 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Direct interaction between DnaK and djlA is needed for the induction of the wcaABCDE operon which is involved in the synthesis of a colanic acid polysaccharide capsule. The colanic acid capsule may help the bacterium survive conditions outside the host [, ]; PDB: 2H5N_D 2JXU_A.
Probab=36.97 E-value=29 Score=30.01 Aligned_cols=75 Identities=19% Similarity=0.167 Sum_probs=40.3
Q ss_pred CCCcccHHHHHHH---h----ccCCcHHHHHHHhhhcCCCCCceeHHHHHHHHHhhccCcchhHHHHHHhhhhCCCCCCc
Q 008641 409 PSGCVKLLDFLSV---L----RLKTCPLSDEIFGFIDVDKNGSITFKQFLYASAHVMKLPLFWQACELAFAECDPDGNGF 481 (558)
Q Consensus 409 ~~G~Is~~ef~~~---l----~~~~~~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~ 481 (558)
-||.++.+|...+ + +.. ......+...++.......++.++...+...........-+..++.....| |.
T Consensus 36 aDG~v~~~E~~~i~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~ll~~l~~ia~AD--G~ 112 (140)
T PF05099_consen 36 ADGEVDPEEIEAIRQLLAERFGLS-PEEAEELIELADELKQEPIDLEELLRELRDSLSPEEREDLLRMLIAIAYAD--GE 112 (140)
T ss_dssp TTSS--CHHHHHHHHHHHHCGCGS-CHHHHHHHHHHCHHHHHCCHHHHHHHHHCTS--HHHHHHHHHHHHHHCTCT--TC
T ss_pred cCCCCCHHHHHHHHHHHHHhhCCC-HHHHHHHHHHHHHHHhccccHHHHHHHHHHhhchHHHHHHHHHHHHHHhcC--CC
Confidence 4788888887433 3 222 234555555555544456778888776654333222244566777777766 45
Q ss_pred ccHHH
Q 008641 482 ISENQ 486 (558)
Q Consensus 482 Is~~E 486 (558)
++..|
T Consensus 113 ~~~~E 117 (140)
T PF05099_consen 113 ISPEE 117 (140)
T ss_dssp -SCCH
T ss_pred CCHHH
Confidence 55444
No 231
>cd07313 terB_like_2 tellurium resistance terB-like protein, subgroup 2. This family includes several uncharacterized bacterial proteins. Protein sequence homology analysis shows they are similar to tellurium resistance protein terB, but the function of this family is unknown.
Probab=36.96 E-value=46 Score=27.05 Aligned_cols=52 Identities=10% Similarity=-0.022 Sum_probs=22.0
Q ss_pred CCceeHHHHHHHHHhhccC-cchhHHHHHHhhhhCCCCCCcccHHHHHHHHHH
Q 008641 442 NGSITFKQFLYASAHVMKL-PLFWQACELAFAECDPDGNGFISENQLEVTIRP 493 (558)
Q Consensus 442 ~g~Is~~Ef~~~~~~~~~~-~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~ 493 (558)
||.++-.|-..+-..+... ..+.++...+...+........+..++.+.+..
T Consensus 13 DG~v~~~E~~~i~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 65 (104)
T cd07313 13 DGEYDEEERAAIDRLLAERFGLDAEEAAELLAEAEALEEEAPDLYEFTSLIKE 65 (104)
T ss_pred cCCCCHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 5566666544333222221 112333344444443333334555555555543
No 232
>KOG3449 consensus 60S acidic ribosomal protein P2 [Translation, ribosomal structure and biogenesis]
Probab=34.44 E-value=1.7e+02 Score=24.27 Aligned_cols=53 Identities=13% Similarity=0.248 Sum_probs=43.6
Q ss_pred HHHhhhhCCCCCCcccHHHHHHHHHHhCCCCcHHHHHHHHHHhCCCCCCceeHHHHHH
Q 008641 468 ELAFAECDPDGNGFISENQLEVTIRPAIPDLNKYEIDSLFRLFDSDGDGRVSRDDFIC 525 (558)
Q Consensus 468 ~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~ 525 (558)
..+|-+++..++-..+..+++.+|...|-...++.++.++..+. |+ +.+|.+.
T Consensus 4 vaAYLL~~lgGn~~psa~DikkIl~sVG~E~d~e~i~~visel~----GK-~i~ElIA 56 (112)
T KOG3449|consen 4 VAAYLLAVLGGNASPSASDIKKILESVGAEIDDERINLVLSELK----GK-DIEELIA 56 (112)
T ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHhCcccCHHHHHHHHHHhc----CC-CHHHHHH
Confidence 45677777788888999999999999999999999999999985 33 6666653
No 233
>PF11116 DUF2624: Protein of unknown function (DUF2624); InterPro: IPR020277 This entry contains proteins with no known function.
Probab=33.69 E-value=1.9e+02 Score=22.88 Aligned_cols=48 Identities=8% Similarity=0.052 Sum_probs=30.5
Q ss_pred cccHHHHHHHHHHhCCCCcHHHHHHHHHHhCCCCCCceeHHHHHHHHH
Q 008641 481 FISENQLEVTIRPAIPDLNKYEIDSLFRLFDSDGDGRVSRDDFICCLR 528 (558)
Q Consensus 481 ~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~ 528 (558)
.||.+||....+..+.++++++++.+...+-.+.=.-.+-+|=.++++
T Consensus 14 ~iT~~eLlkyskqy~i~it~~QA~~I~~~lr~k~inIfn~~~r~~llk 61 (85)
T PF11116_consen 14 NITAKELLKYSKQYNISITKKQAEQIANILRGKNINIFNEQERKKLLK 61 (85)
T ss_pred cCCHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHH
Confidence 477778888877777777877777777776544333344444434443
No 234
>PF00404 Dockerin_1: Dockerin type I repeat; InterPro: IPR018242 Gram-positive, thermophilic anaerobes such as Clostridium thermocellum or Clostridium cellulolyticum secretes a highly active and thermostable cellulase complex (cellulosome) responsible for the degradation of crystalline cellulose [, ]. The cellulosome contains at least 30 polypeptides, the majority of the enzymes are endoglucanases (3.2.1.4 from EC), but there are also some xylanases (3.2.1.8 from EC), beta-glucosidases (3.2.1.21 from EC) and endo-beta-1,3-1,4-glucanases (3.2.1.73 from EC). Complete sequence data for many of these enzymes has been obtained. A majority of these proteins contain a highly conserved type I dockerin domain of about 65 to 70 residues, which is generally (but not always) located in the C terminus. The dockerin domain is the binding partner of the cohesin domain (see IPR002102 from INTERPRO). The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome []. The dockerin domain contains a tandem repeat of two calcium-binding loop-helix motifs (distinct from EF-hand Ca-binding motifs). These motifs are about 24 amino acids in length. This entry represents these repeated Ca-binding motifs.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3P0D_J 1OHZ_B 2CCL_B 1DAV_A 1DAQ_A 2VN5_B 2VN6_B.
Probab=31.81 E-value=65 Score=18.14 Aligned_cols=12 Identities=25% Similarity=0.517 Sum_probs=5.3
Q ss_pred CCCCCcccHHHH
Q 008641 476 PDGNGFISENQL 487 (558)
Q Consensus 476 ~d~~G~Is~~E~ 487 (558)
.|+||.|+.-++
T Consensus 2 vN~DG~vna~D~ 13 (21)
T PF00404_consen 2 VNGDGKVNAIDL 13 (21)
T ss_dssp TTSSSSSSHHHH
T ss_pred CCCCCcCCHHHH
Confidence 344444444443
No 235
>PLN02223 phosphoinositide phospholipase C
Probab=30.71 E-value=1.4e+02 Score=32.31 Aligned_cols=65 Identities=9% Similarity=-0.136 Sum_probs=46.6
Q ss_pred hHHHHHHhhhhCCCCCCcccHHHHHHHH---HHhC--CCCcHHHHHHHHHHhCCC--------CCCceeHHHHHHHHHh
Q 008641 464 WQACELAFAECDPDGNGFISENQLEVTI---RPAI--PDLNKYEIDSLFRLFDSD--------GDGRVSRDDFICCLRK 529 (558)
Q Consensus 464 ~~~~~~~F~~~D~d~~G~Is~~E~~~~l---~~~~--~~~~~~~i~~lf~~~D~d--------~dG~Is~~eF~~~l~~ 529 (558)
.++++.+|..|- +++|.++.+.+.+++ .... ...+.++++.+++.+-.. ..+.++.+.|.++|..
T Consensus 15 p~~v~~~f~~~~-~~~~~m~~~~l~~fl~~l~~~q~e~~~~~~~a~~i~~~~~~~~~~~~~~~~~~~l~~~~f~~~L~s 92 (537)
T PLN02223 15 PDLILNFFGNEF-HGYDDDMPELLPRFIELLDTEKDEDGAGLNAAEKIAAELKRRKCDILAFRNLRCLELDHLNEFLFS 92 (537)
T ss_pred cHHHHHHHHHhh-cCCCCCCHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHhhcccchhhhhccccCHHHHHHHhcC
Confidence 578889998884 566889999888888 4432 256677777777765322 1256999999998876
No 236
>PF08414 NADPH_Ox: Respiratory burst NADPH oxidase; InterPro: IPR013623 This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism. It tends to occur to the N terminus of an EF-hand (IPR002048 from INTERPRO), which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants []. ; GO: 0004601 peroxidase activity, 0050664 oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor, 0055114 oxidation-reduction process; PDB: 3A8R_A.
Probab=29.90 E-value=1.6e+02 Score=23.92 Aligned_cols=59 Identities=10% Similarity=-0.015 Sum_probs=29.9
Q ss_pred HHHHHHhhhcCCCCCceeHHHHHHHHHhhccCcchhHHHHHHhhhhC---CCCCCcccHHHHHHHHHH
Q 008641 429 LSDEIFGFIDVDKNGSITFKQFLYASAHVMKLPLFWQACELAFAECD---PDGNGFISENQLEVTIRP 493 (558)
Q Consensus 429 ~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~~~~~~~~~F~~~D---~d~~G~Is~~E~~~~l~~ 493 (558)
.+++-|+.+-. ||.+..+.|-.++... ++.+-...+|..+- .-..+.|+.+|++.+...
T Consensus 31 ~VE~RFd~La~--dG~L~rs~Fg~CIGM~----dSkeFA~eLFdALaRrr~i~~~~I~k~eL~efW~q 92 (100)
T PF08414_consen 31 EVEKRFDKLAK--DGLLPRSDFGECIGMK----DSKEFAGELFDALARRRGIKGDSITKDELKEFWEQ 92 (100)
T ss_dssp HHHHHHHHH-B--TTBEEGGGHHHHHT------S-HHHHHHHHHHHHHHTT--SSEE-HHHHHHHHHH
T ss_pred HHHHHHHHhCc--CCcccHHHHHHhcCCc----ccHHHHHHHHHHHHHhcCCccCCcCHHHHHHHHHH
Confidence 45556666655 6778777777766532 22333444443331 112356777777776654
No 237
>PLN02222 phosphoinositide phospholipase C 2
Probab=29.82 E-value=1.4e+02 Score=32.73 Aligned_cols=58 Identities=10% Similarity=0.050 Sum_probs=37.1
Q ss_pred HHHHHHHhhCCCCCCcccHHHHHHHhcc----C--CcHHHHHHHhhhcC-CCCCceeHHHHHHHHHh
Q 008641 397 NFLEKFLSMNPDPSGCVKLLDFLSVLRL----K--TCPLSDEIFGFIDV-DKNGSITFKQFLYASAH 456 (558)
Q Consensus 397 ~~~~~F~~~D~d~~G~Is~~ef~~~l~~----~--~~~~~~~lf~~~D~-d~~g~Is~~Ef~~~~~~ 456 (558)
++..+|..+-. ++.++.++|.+.|.. . ..+.++++++.+.. .+.+.++++.|..++..
T Consensus 26 ei~~if~~~~~--~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~gF~~yL~s 90 (581)
T PLN02222 26 EIKTIFEKYSE--NGVMTVDHLHRFLIDVQKQDKATREDAQSIINSASSLLHRNGLHLDAFFKYLFG 90 (581)
T ss_pred HHHHHHHHhcC--CCCcCHHHHHHHHHHhcCCccCCHHHHHHHHHhhhhhhhccCcCHHHHHHHhcC
Confidence 45556666642 468999999888732 1 12356777776532 23566888888887743
No 238
>cd02977 ArsC_family Arsenate Reductase (ArsC) family; composed of TRX-fold arsenic reductases and similar proteins including the transcriptional regulator, Spx. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX), through a single catalytic cysteine. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases. Spx is a general regulator that exerts negative and positive control over transcription initiation by binding to the C-terminal domain of the alpha subunit of RNA polymerase.
Probab=29.59 E-value=89 Score=25.45 Aligned_cols=55 Identities=11% Similarity=0.129 Sum_probs=35.8
Q ss_pred CcccHHHHHHHHHHhCCCCcHHHHH---HHHHHhCCCCCCceeHHHHHHHHHhCcchHH
Q 008641 480 GFISENQLEVTIRPAIPDLNKYEID---SLFRLFDSDGDGRVSRDDFICCLRKNPLLIA 535 (558)
Q Consensus 480 G~Is~~E~~~~l~~~~~~~~~~~i~---~lf~~~D~d~dG~Is~~eF~~~l~~~~~~~~ 535 (558)
...+.+|+.+++...+.+ .++-++ ..|+..+.+....++-+|.+++|.++|.+++
T Consensus 34 ~~~~~~~l~~~~~~~~~~-~~~li~~~~~~~~~l~~~~~~~ls~~e~~~~l~~~p~Lik 91 (105)
T cd02977 34 EPPTKEELKELLAKLGLG-VEDLFNTRGTPYRKLGLADKDELSDEEALELMAEHPKLIK 91 (105)
T ss_pred CCCCHHHHHHHHHhcCCC-HHHHHhcCCchHHHcCCccccCCCHHHHHHHHHhCcCeee
Confidence 456777888887766521 122222 3455555443467899999999999998753
No 239
>PF07308 DUF1456: Protein of unknown function (DUF1456); InterPro: IPR009921 This domain occurs in several hypothetical bacterial proteins of around 150 residues in length. The function of this domain is unknown.
Probab=29.19 E-value=1.4e+02 Score=22.44 Aligned_cols=27 Identities=19% Similarity=0.150 Sum_probs=16.6
Q ss_pred HHHHHHHHHhCCCCcHHHHHHHHHHhC
Q 008641 485 NQLEVTIRPAIPDLNKYEIDSLFRLFD 511 (558)
Q Consensus 485 ~E~~~~l~~~~~~~~~~~i~~lf~~~D 511 (558)
+++.++++..+..++.+++..+++.=|
T Consensus 17 ~~m~~if~l~~~~vs~~el~a~lrke~ 43 (68)
T PF07308_consen 17 DDMIEIFALAGFEVSKAELSAWLRKED 43 (68)
T ss_pred HHHHHHHHHcCCccCHHHHHHHHCCCC
Confidence 456666666666666666666666543
No 240
>cd03035 ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC. The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.
Probab=28.95 E-value=36 Score=28.05 Aligned_cols=52 Identities=15% Similarity=0.149 Sum_probs=33.1
Q ss_pred cccHHHHHHHHHHhCCCCcHHHH---HHHHHHhCCCCCCceeHHHHHHHHHhCcchHH
Q 008641 481 FISENQLEVTIRPAIPDLNKYEI---DSLFRLFDSDGDGRVSRDDFICCLRKNPLLIA 535 (558)
Q Consensus 481 ~Is~~E~~~~l~~~~~~~~~~~i---~~lf~~~D~d~dG~Is~~eF~~~l~~~~~~~~ 535 (558)
.++.+|+.+++...|. ++-+ ...|+.++.+....++-+|.+++|.++|.+++
T Consensus 35 p~s~~eL~~~l~~~g~---~~li~~~~~~yk~l~l~~~~~~s~~e~~~~l~~~p~Lik 89 (105)
T cd03035 35 GLDAATLERWLAKVGW---ETLLNKRGTTWRKLDDAQKAALDAAKAIALMLEHPSLIK 89 (105)
T ss_pred CCCHHHHHHHHHHhCh---HHHHccCchHHHhCChhhhccCCHHHHHHHHHhCcCeee
Confidence 5677777777776551 1111 13455554432245888999999999987664
No 241
>PF02761 Cbl_N2: CBL proto-oncogene N-terminus, EF hand-like domain; InterPro: IPR014741 Cbl (Casitas B-lineage lymphoma) is an adaptor protein that functions as a negative regulator of many signalling pathways that start from receptors at the cell surface. The N-terminal region of Cbl contains a Cbl-type phosphotyrosine-binding (Cbl-PTB) domain, which is composed of three evolutionarily conserved domains: an N-terminal four-helix bundle (4H) domain, an EF hand-like calcium-binding domain, and a divergent SH2-like domain. The calcium-bound EF-hand wedges between the 4H and SH2 domains, and roughly determines their relative orientation. The Cbl-PTB domain has also been named Cbl N-terminal (Cbl-N) or tyrosine kinase binding (TKB) domain [, ]. The N-terminal 4H domain contains four long alpha-helices. The C and D helices in this domain pack against the adjacent EF-hand-like domain, and a highly conserved loop connecting the A and B helices contacts the SH2-like domain. The EF-hand motif is similar to classical EF-hand proteins. The SH2-like domain retains the general helix-sheet-helix architecture of the SH2 fold, but lacks the secondary beta-sheet, comprising beta-strands D', E and F, and also a prominent BG loop []. This entry represents the EF hand-like domain.; GO: 0005509 calcium ion binding; PDB: 3OP0_A 3PFV_A 3VGO_A 3PLF_B 2Y1M_A 2CBL_A 3BUX_B 3BUN_B 3BUM_B 3OB1_B ....
Probab=28.92 E-value=2.9e+02 Score=21.87 Aligned_cols=48 Identities=13% Similarity=0.095 Sum_probs=29.4
Q ss_pred CcccHHHHHHHHHHhCCCCcHHHHHHHHHHhCCCCCCceeHHHHHHHH
Q 008641 480 GFISENQLEVTIRPAIPDLNKYEIDSLFRLFDSDGDGRVSRDDFICCL 527 (558)
Q Consensus 480 G~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~l 527 (558)
-.|...+|+..|.....-.+..+...+=..+|...||+||-=||--+.
T Consensus 21 ~IVPW~~F~~~L~~~h~~~~~~~~~aLk~TiDlT~n~~iS~FeFdvFt 68 (85)
T PF02761_consen 21 TIVPWSEFRQALQKVHPISSGLEAMALKSTIDLTCNDYISNFEFDVFT 68 (85)
T ss_dssp SEEEHHHHHHHHHHHS--SSHHHHHHHHHHH-TTSSSEEEHHHHHHHH
T ss_pred eEeeHHHHHHHHHHhcCCCchHHHHHHHHHHhcccCCccchhhhHHHH
Confidence 457777777777766544444555566666777777777776665443
No 242
>PF14333 DUF4389: Domain of unknown function (DUF4389)
Probab=28.47 E-value=2.8e+02 Score=21.51 Aligned_cols=12 Identities=8% Similarity=0.725 Sum_probs=7.0
Q ss_pred HHHHhhhhhHHH
Q 008641 95 FVKIVVCFPIVL 106 (558)
Q Consensus 95 ~~~~~l~~pl~~ 106 (558)
++|.++++|..+
T Consensus 6 ~~R~l~mi~~~i 17 (80)
T PF14333_consen 6 WLRLLLMIPFAI 17 (80)
T ss_pred HHHHHHHHHHHH
Confidence 566666665544
No 243
>KOG4403 consensus Cell surface glycoprotein STIM, contains SAM domain [General function prediction only]
Probab=27.89 E-value=89 Score=32.28 Aligned_cols=91 Identities=15% Similarity=0.054 Sum_probs=50.7
Q ss_pred CCCCcccHHHHHHHhccC--------CcHHHHHHHhhhcCCCCCceeHHHHHHHHHhhccCcchhHHHHHHhhhhCCCCC
Q 008641 408 DPSGCVKLLDFLSVLRLK--------TCPLSDEIFGFIDVDKNGSITFKQFLYASAHVMKLPLFWQACELAFAECDPDGN 479 (558)
Q Consensus 408 d~~G~Is~~ef~~~l~~~--------~~~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~ 479 (558)
.++...+..||+.+.... .-+.++.+-+.+|.|.+|.|+.+|=-.+++.-++..+...+-...|-- .|
T Consensus 40 agds~at~nefc~~~~~~c~s~~dklg~EAir~iHrqmDDD~nG~Id~~ESdeFlrEdmky~~~~~kr~~~fH~----dD 115 (575)
T KOG4403|consen 40 AGDSRATRNEFCEVDAPECKSEQDKLGYEAIRDIHRQMDDDHNGSIDVEESDEFLREDMKYRDSTRKRSEKFHG----DD 115 (575)
T ss_pred cCCchhhhccchhcCCchhhcccchhhHHHHHHHHHhcccccCCCcccccchHHHHHHhhcccchhhhhhhccC----Cc
Confidence 455667777776554211 112466777777777788888777666666555544433333334433 23
Q ss_pred CcccHHHHHHHHHHh-CCCCcHHH
Q 008641 480 GFISENQLEVTIRPA-IPDLNKYE 502 (558)
Q Consensus 480 G~Is~~E~~~~l~~~-~~~~~~~~ 502 (558)
..|+.+|+=+..... -.+.+.++
T Consensus 116 ~~ItVedLWeaW~~Sev~nWT~e~ 139 (575)
T KOG4403|consen 116 KHITVEDLWEAWKESEVHNWTNER 139 (575)
T ss_pred cceeHHHHHHHHHhhhhhcchHHH
Confidence 467777775554433 23444443
No 244
>KOG4301 consensus Beta-dystrobrevin [Cytoskeleton]
Probab=26.37 E-value=1.4e+02 Score=29.95 Aligned_cols=98 Identities=14% Similarity=0.126 Sum_probs=66.0
Q ss_pred HHHHHhhhcCCCCCceeHHHHHHHHHhhccCcchhHHHHHHhhhhCCCCCCcccHHHHHHHHHHhC-----------CCC
Q 008641 430 SDEIFGFIDVDKNGSITFKQFLYASAHVMKLPLFWQACELAFAECDPDGNGFISENQLEVTIRPAI-----------PDL 498 (558)
Q Consensus 430 ~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~-----------~~~ 498 (558)
+.-+...+|..+.|.++.--....+...+.... .++++.+|.... |.+|.+..-.+.++++... .+.
T Consensus 112 laflLaA~ds~~~g~~~vfavkialatlc~gk~-~dklryIfs~is-ds~gim~~i~~~~fl~evlslpT~v~e~psfg~ 189 (434)
T KOG4301|consen 112 LAFLLAAEDSEGQGKQQVFAVKIALATLCGGKI-KDKLRYIFSLIS-DSRGIMQEIQRDQFLHEVLSLPTAVFEGPSFGY 189 (434)
T ss_pred HHHHHhhcCccCCCCceeecchhhhhhhccchH-HHHHHHHHHHHc-cchHHHHHHHHHHHHHHHHcCCchhhcCCCcch
Confidence 344566788889998887777777766666544 788899998876 4568777777777776542 122
Q ss_pred cHHHHHHHHHHhCCCCCCceeHHHHHHHHHhCcchH
Q 008641 499 NKYEIDSLFRLFDSDGDGRVSRDDFICCLRKNPLLI 534 (558)
Q Consensus 499 ~~~~i~~lf~~~D~d~dG~Is~~eF~~~l~~~~~~~ 534 (558)
++.-++.-|- .+-+++.+.|+..+...|.-.
T Consensus 190 te~~a~~cf~-----qqrKv~Ln~fldtl~sdp~p~ 220 (434)
T KOG4301|consen 190 TELSARLCFL-----QQRKVELNQFLDTLMSDPPPQ 220 (434)
T ss_pred HHHHHHHHHH-----HHHHHHHHHHHHHHhcCCCch
Confidence 3333443333 345788999998888776533
No 245
>PRK09727 his operon leader peptide; Provisional
Probab=26.16 E-value=34 Score=19.40 Aligned_cols=8 Identities=50% Similarity=0.958 Sum_probs=3.2
Q ss_pred CCCCCCCC
Q 008641 4 HHRDHDHD 11 (558)
Q Consensus 4 ~~~~~~~~ 11 (558)
|||||.+|
T Consensus 9 hhhhhhpd 16 (26)
T PRK09727 9 HHHHHHPD 16 (26)
T ss_pred cccccCCC
Confidence 34444333
No 246
>PF08461 HTH_12: Ribonuclease R winged-helix domain; InterPro: IPR013668 This domain is found at the amino terminus of Ribonuclease R and a number of presumed transcriptional regulatory proteins from archaea.
Probab=26.05 E-value=89 Score=23.29 Aligned_cols=37 Identities=16% Similarity=0.288 Sum_probs=31.6
Q ss_pred CCCcccHHHHHHHHHHhCCCCcHHHHHHHHHHhCCCC
Q 008641 478 GNGFISENQLEVTIRPAIPDLNKYEIDSLFRLFDSDG 514 (558)
Q Consensus 478 ~~G~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D~d~ 514 (558)
.++-++..++.+.+...|..++++.+....+.+|.+|
T Consensus 10 ~~~P~g~~~l~~~L~~~g~~~se~avRrrLr~me~~G 46 (66)
T PF08461_consen 10 SDKPLGRKQLAEELKLRGEELSEEAVRRRLRAMERDG 46 (66)
T ss_pred cCCCCCHHHHHHHHHhcChhhhHHHHHHHHHHHHHCC
Confidence 3467999999999998898999999999999998654
No 247
>PF12174 RST: RCD1-SRO-TAF4 (RST) plant domain; InterPro: IPR022003 This domain is found in many plant proteins including SROs and RCD1s; it is required for interaction with multiple plant transcription factors.
Probab=25.43 E-value=1.6e+02 Score=22.26 Aligned_cols=48 Identities=13% Similarity=0.076 Sum_probs=26.2
Q ss_pred CceeHHHHHHHHHhhccCcchhHHHHHHhhhhCCCCCCcccHHHHHHHHHHh
Q 008641 443 GSITFKQFLYASAHVMKLPLFWQACELAFAECDPDGNGFISENQLEVTIRPA 494 (558)
Q Consensus 443 g~Is~~Ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~ 494 (558)
-.++|......+..... .+....+...|+.=..+.|+.+||.+.++..
T Consensus 7 p~~~F~~L~~~l~~~l~----~~~~~~l~~~Y~~~k~~kIsR~~fvr~lR~I 54 (70)
T PF12174_consen 7 PWMPFPMLFSALSKHLP----PSKMDLLQKHYEEFKKKKISREEFVRKLRQI 54 (70)
T ss_pred CcccHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 34555555555544433 2334444444444456677777777777654
No 248
>KOG2871 consensus Uncharacterized conserved protein [Function unknown]
Probab=25.13 E-value=59 Score=32.97 Aligned_cols=63 Identities=19% Similarity=0.272 Sum_probs=44.4
Q ss_pred hHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCcHHH-HHHHHHHhCCCCCCceeHHHHHHH
Q 008641 464 WQACELAFAECDPDGNGFISENQLEVTIRPAIPDLNKYE-IDSLFRLFDSDGDGRVSRDDFICC 526 (558)
Q Consensus 464 ~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~-i~~lf~~~D~d~dG~Is~~eF~~~ 526 (558)
.+.+++.|+.+|..++|+|+-.-++.++......+++.+ +..+=+.+|..+-|.|-.++|...
T Consensus 308 s~q~rR~f~a~d~~d~nfis~s~~~~vm~~~N~~vse~a~v~l~~~~l~pE~~~iil~~d~lg~ 371 (449)
T KOG2871|consen 308 SEQLRRNFHAYDPEDNNFISCSGLQIVMTALNRLVSEPAYVMLMRQPLDPESLGIILLEDFLGE 371 (449)
T ss_pred CHHHHhhhhccCccCCCeeecHHHHHHHHHhcccccCHHHHHHhcCccChhhcceEEecccccc
Confidence 578999999999999999999999999888764455443 333333456666666666655443
No 249
>PTZ00373 60S Acidic ribosomal protein P2; Provisional
Probab=25.04 E-value=2.7e+02 Score=23.36 Aligned_cols=54 Identities=15% Similarity=0.324 Sum_probs=42.3
Q ss_pred HHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCcHHHHHHHHHHhCCCCCCceeHHHHHH
Q 008641 467 CELAFAECDPDGNGFISENQLEVTIRPAIPDLNKYEIDSLFRLFDSDGDGRVSRDDFIC 525 (558)
Q Consensus 467 ~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~ 525 (558)
.-.+|-++-..++..+|.+++..+|+..|..+....+..+++.+.. .+.+|++.
T Consensus 5 yvaAYlL~~lgG~~~pTaddI~kIL~AaGveVd~~~~~l~~~~L~G-----KdI~ELIa 58 (112)
T PTZ00373 5 YVAAYLMCVLGGNENPTKKEVKNVLSAVNADVEDDVLDNFFKSLEG-----KTPHELIA 58 (112)
T ss_pred HHHHHHHHHHcCCCCCCHHHHHHHHHHcCCCccHHHHHHHHHHHcC-----CCHHHHHH
Confidence 3455566666677789999999999999999999999999998852 45666654
No 250
>PF13608 Potyvirid-P3: Protein P3 of Potyviral polyprotein
Probab=24.80 E-value=97 Score=32.90 Aligned_cols=35 Identities=9% Similarity=-0.022 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHhhCCCCCCcccHHHHHHHhccCCcH
Q 008641 393 LEAVNFLEKFLSMNPDPSGCVKLLDFLSVLRLKTCP 428 (558)
Q Consensus 393 ~~~~~~~~~F~~~D~d~~G~Is~~ef~~~l~~~~~~ 428 (558)
++...+...| .+....++.-|.+||.+.+.....+
T Consensus 286 ~~~~~i~~ly-~~~~~~~~~pt~eEF~e~v~~~~p~ 320 (445)
T PF13608_consen 286 KEEDEIEHLY-MLCKKHGKLPTEEEFLEYVEEVNPE 320 (445)
T ss_pred HHHHHHHHHH-HHHHHhCCCCCHHHHHHHHHhcCch
Confidence 3445566677 6666677889999999998754443
No 251
>PF12419 DUF3670: SNF2 Helicase protein ; InterPro: IPR022138 This domain family is found in bacteria, archaea and eukaryotes, and is approximately 140 amino acids in length. The family is found in association with PF00271 from PFAM, PF00176 from PFAM. Most of the proteins in this family are annotated as SNF2 helicases but there is little accompanying literature to confirm this.
Probab=24.79 E-value=1.3e+02 Score=26.27 Aligned_cols=49 Identities=16% Similarity=0.375 Sum_probs=35.2
Q ss_pred CCCcccHHHHHHHHHHhCC---------CCcHHHHHHHHHHhCCCCCC-ceeHHHHHHH
Q 008641 478 GNGFISENQLEVTIRPAIP---------DLNKYEIDSLFRLFDSDGDG-RVSRDDFICC 526 (558)
Q Consensus 478 ~~G~Is~~E~~~~l~~~~~---------~~~~~~i~~lf~~~D~d~dG-~Is~~eF~~~ 526 (558)
|+..||.+||.+++..... .++.++++++.+.+...+.+ .++..|-+++
T Consensus 80 Gd~~Ls~eEf~~L~~~~~~LV~~rg~WV~ld~~~l~~~~~~~~~~~~~~~lt~~e~Lr~ 138 (141)
T PF12419_consen 80 GDEELSEEEFEQLVEQKRPLVRFRGRWVELDPEELRRALAFLEKAPKGEKLTLAEALRA 138 (141)
T ss_pred CCEECCHHHHHHHHHcCCCeEEECCEEEEECHHHHHHHHHHHHhccccCCCCHHHHHHH
Confidence 4567888888888876431 45788888888888876555 4888877654
No 252
>PF03672 UPF0154: Uncharacterised protein family (UPF0154); InterPro: IPR005359 The proteins in this entry are functionally uncharacterised.
Probab=24.59 E-value=1.5e+02 Score=22.05 Aligned_cols=33 Identities=15% Similarity=0.180 Sum_probs=29.3
Q ss_pred CCcccHHHHHHHHHHhCCCCcHHHHHHHHHHhC
Q 008641 479 NGFISENQLEVTIRPAIPDLNKYEIDSLFRLFD 511 (558)
Q Consensus 479 ~G~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D 511 (558)
+-.|+.+-++.++..+|.+.++..++++++.+-
T Consensus 29 NPpine~mir~M~~QMG~kpSekqi~Q~m~~mk 61 (64)
T PF03672_consen 29 NPPINEKMIRAMMMQMGRKPSEKQIKQMMRSMK 61 (64)
T ss_pred CCCCCHHHHHHHHHHhCCCccHHHHHHHHHHHH
Confidence 357999999999999999999999999988763
No 253
>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=24.54 E-value=4.5e+02 Score=22.48 Aligned_cols=64 Identities=23% Similarity=0.338 Sum_probs=37.6
Q ss_pred HHHHHHhhhhCCCC--CCcccHHHHHHHHHHhC-------CCCc-----------HHHHHHHHHHhCCCCCCceeHHHHH
Q 008641 465 QACELAFAECDPDG--NGFISENQLEVTIRPAI-------PDLN-----------KYEIDSLFRLFDSDGDGRVSRDDFI 524 (558)
Q Consensus 465 ~~~~~~F~~~D~d~--~G~Is~~E~~~~l~~~~-------~~~~-----------~~~i~~lf~~~D~d~dG~Is~~eF~ 524 (558)
..+..+|+....+. +..|+..|+..++...- .... +--+.-++..||.+++|.|+.-+|.
T Consensus 41 ~~v~~~f~~~~l~~~~d~~l~v~~l~~~L~~iy~~l~~~~p~~~~i~~~~v~~a~~L~ln~Ll~vyD~~rtG~I~vls~K 120 (127)
T PF09068_consen 41 SNVIEAFREHGLNQSNDSSLSVSQLETLLSSIYEFLNKRLPTLHQIPSRPVDLAVDLLLNWLLNVYDSQRTGKIRVLSFK 120 (127)
T ss_dssp HHHHHHHHHTT---T-TSEEEHHHHHHHHHHHHHHHHHHSTTS--HH-----HHHHHHHHHHHHHH-TT--SEEEHHHHH
T ss_pred HHHHHHHHHcCCCcccCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCchhHHHHHHHHHHHHHHHhCCCCCCeeehhHHH
Confidence 45566666654432 35677777777776542 1111 1235668899999999999999887
Q ss_pred HHHH
Q 008641 525 CCLR 528 (558)
Q Consensus 525 ~~l~ 528 (558)
-.+.
T Consensus 121 vaL~ 124 (127)
T PF09068_consen 121 VALI 124 (127)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6553
No 254
>PRK00523 hypothetical protein; Provisional
Probab=24.09 E-value=1.5e+02 Score=22.53 Aligned_cols=43 Identities=16% Similarity=0.138 Sum_probs=33.8
Q ss_pred HHHhhhhCCCCCCcccHHHHHHHHHHhCCCCcHHHHHHHHHHhC
Q 008641 468 ELAFAECDPDGNGFISENQLEVTIRPAIPDLNKYEIDSLFRLFD 511 (558)
Q Consensus 468 ~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D 511 (558)
+..|+.+=++ +-.|+.+-++.++..+|.+.++..++++++.+.
T Consensus 27 rk~~~k~l~~-NPpine~mir~M~~QMGqKPSekki~Q~m~~mk 69 (72)
T PRK00523 27 KKMFKKQIRE-NPPITENMIRAMYMQMGRKPSESQIKQVMRSVK 69 (72)
T ss_pred HHHHHHHHHH-CcCCCHHHHHHHHHHhCCCccHHHHHHHHHHHH
Confidence 4445544333 357999999999999999999999999998873
No 255
>PLN02230 phosphoinositide phospholipase C 4
Probab=23.19 E-value=2.5e+02 Score=31.01 Aligned_cols=26 Identities=4% Similarity=0.061 Sum_probs=14.5
Q ss_pred HHHHHHHHhhCCCCCCcccHHHHHHHh
Q 008641 396 VNFLEKFLSMNPDPSGCVKLLDFLSVL 422 (558)
Q Consensus 396 ~~~~~~F~~~D~d~~G~Is~~ef~~~l 422 (558)
.+++.+|..+-. +++.++.++|.+.|
T Consensus 29 ~ei~~lf~~~s~-~~~~mt~~~l~~FL 54 (598)
T PLN02230 29 ADVRDLFEKYAD-GDAHMSPEQLQKLM 54 (598)
T ss_pred HHHHHHHHHHhC-CCCccCHHHHHHHH
Confidence 345555666532 23566666666666
No 256
>COG5562 Phage envelope protein [General function prediction only]
Probab=23.11 E-value=36 Score=29.23 Aligned_cols=24 Identities=29% Similarity=0.361 Sum_probs=14.6
Q ss_pred HHhhhcCCCCCceeHHHHHHHHHh
Q 008641 433 IFGFIDVDKNGSITFKQFLYASAH 456 (558)
Q Consensus 433 lf~~~D~d~~g~Is~~Ef~~~~~~ 456 (558)
+-.....+..|..||+||+..+..
T Consensus 77 i~~al~~~qsGqttF~ef~~~la~ 100 (137)
T COG5562 77 IKTALRRHQSGQTTFEEFCSALAE 100 (137)
T ss_pred HHHHHHHHhcCCccHHHHHHHHHh
Confidence 334445566677777777766654
No 257
>KOG4070 consensus Putative signal transduction protein p25 [General function prediction only; Signal transduction mechanisms]
Probab=22.82 E-value=1.9e+02 Score=25.47 Aligned_cols=46 Identities=20% Similarity=0.140 Sum_probs=29.8
Q ss_pred HHHHHhhhcCCCCCceeHHHHHHHHHhhcc----CcchhHHHHHHhhhhC
Q 008641 430 SDEIFGFIDVDKNGSITFKQFLYASAHVMK----LPLFWQACELAFAECD 475 (558)
Q Consensus 430 ~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~----~~~~~~~~~~~F~~~D 475 (558)
..-.|..+-...-+.|+|+||...+..+.. ....++.+..+.+++.
T Consensus 59 t~i~fsKvkg~~~~~~tf~~fkkal~ela~~R~k~Ks~ee~l~~I~~lla 108 (180)
T KOG4070|consen 59 TDIVFSKVKGKKARTITFEEFKKALEELATKRFKGKSKEEALDAICQLLA 108 (180)
T ss_pred cceeeeeccccccccccHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHh
Confidence 455666666666789999999888776652 2233556666665553
No 258
>TIGR02395 rpoN_sigma RNA polymerase sigma-54 factor. A sigma factor is a DNA-binding protein protein that binds to the DNA-directed RNA polymerase core to produce the holoenzyme capable of initiating transcription at specific sites. Different sigma factors act in vegetative growth, heat shock, extracytoplasmic functions (ECF), etc. This model represents the clade of sigma factors called sigma-54, or RpoN (unrelated to sigma 70-type factors such as RpoD/SigA). RpoN is responsible for enhancer-dependent transcription, and its presence characteristically is associated with varied panels of activators, most of which are enhancer-binding proteins (but see Brahmachary, et al., PubMed:15231786). RpoN may be responsible for transcription of nitrogen fixation genes, flagellins, pilins, etc., and synonyms for the gene symbol rpoN, such as ntrA, reflect these observations
Probab=22.80 E-value=8.8e+02 Score=25.63 Aligned_cols=66 Identities=12% Similarity=0.047 Sum_probs=46.7
Q ss_pred ccChHHHHHHHHHHHhhCCCCCCcccHHHHHHHhccCCcH--HHHHHHhhhcCCCCCceeHHHHHHHH
Q 008641 389 HISSLEAVNFLEKFLSMNPDPSGCVKLLDFLSVLRLKTCP--LSDEIFGFIDVDKNGSITFKQFLYAS 454 (558)
Q Consensus 389 ~lt~~~~~~~~~~F~~~D~d~~G~Is~~ef~~~l~~~~~~--~~~~lf~~~D~d~~g~Is~~Ef~~~~ 454 (558)
.++..+..-...+-..+|.+|==..+.+++...++..... .+...++.+|.-|=|.=+..|++.+=
T Consensus 90 ~~~~~~~~ia~~iI~~LD~~GyL~~~~~eia~~l~~~~~~ve~~l~~iq~leP~GIgAr~L~EcLllQ 157 (429)
T TIGR02395 90 LFTERDRKIALYIIDNLDEDGYLEIDLEEIADELEVSEEEVEKVLELIQRLDPAGVGARDLQECLLLQ 157 (429)
T ss_pred CCCHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHcCCCHHHHHHHHHHHhcCCCCccCcCCHHHHHHHH
Confidence 3566666666666667664433334589999888876543 45677888999999999999987653
No 259
>KOG4004 consensus Matricellular protein Osteonectin/SPARC/BM-40 [Extracellular structures]
Probab=22.53 E-value=36 Score=31.24 Aligned_cols=56 Identities=13% Similarity=0.207 Sum_probs=40.7
Q ss_pred HHHhhCCC-CCCcccHHHHHHHhc-cCCcH-HHHHHHhhhcCCCCCceeHHHHHHHHHh
Q 008641 401 KFLSMNPD-PSGCVKLLDFLSVLR-LKTCP-LSDEIFGFIDVDKNGSITFKQFLYASAH 456 (558)
Q Consensus 401 ~F~~~D~d-~~G~Is~~ef~~~l~-~~~~~-~~~~lf~~~D~d~~g~Is~~Ef~~~~~~ 456 (558)
.|-.+|.. .||+++-.|+.-+-. +.+-+ -+...|...|.|+||.|+.+|+...+..
T Consensus 192 qf~qld~~p~d~~~sh~el~pl~ap~ipme~c~~~f~e~cd~~nd~~ial~ew~~c~gi 250 (259)
T KOG4004|consen 192 QFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFGI 250 (259)
T ss_pred eeccccCCCccccccccccccccCCcccHHhhchhhhhcccCCCCCceeHHHhhcccCc
Confidence 35666654 589999999865432 22222 4678899999999999999999776643
No 260
>PF04695 Pex14_N: Peroxisomal membrane anchor protein (Pex14p) conserved region; InterPro: IPR006785 This conserved region defines a group of peroxisomal membrane anchor proteins which bind the PTS1 (peroxisomal targeting signal) receptor and are required for the import of PTS1-containing proteins into peroxisomes. Loss of functional Pex14p results in defects in both the PTS1 and PTS2-dependent import pathways. Deletion analysis of this conserved region implicates it in selective peroxisome degradation. In the majority of members this region is situated at the N terminus of the protein [, ].; GO: 0005777 peroxisome, 0016020 membrane; PDB: 2W85_A 2W84_A 3FF5_B.
Probab=22.52 E-value=2.6e+02 Score=24.20 Aligned_cols=49 Identities=14% Similarity=-0.093 Sum_probs=30.3
Q ss_pred hHHHHHHhhhhCCCCCCcccHHHHHHHHHHhCCCCcHHHHHHHHHHhCCCC
Q 008641 464 WQACELAFAECDPDGNGFISENQLEVTIRPAIPDLNKYEIDSLFRLFDSDG 514 (558)
Q Consensus 464 ~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D~d~ 514 (558)
++.+..+-+.+...+-..-..++=.++|+..| ++++||+++|+....+.
T Consensus 3 e~li~~A~~FL~~p~V~~sp~~~k~~FL~sKG--Lt~~EI~~al~~a~~~~ 51 (136)
T PF04695_consen 3 EDLIEQAVKFLQDPKVRNSPLEKKIAFLESKG--LTEEEIDEALGRAGSPP 51 (136)
T ss_dssp HHHHHHHHHHHCTTTCCCS-HHHHHHHHHHCT----HHHHHHHHHHHT--S
T ss_pred HHHHHHHHHHhCCcccccCCHHHHHHHHHcCC--CCHHHHHHHHHhcCCcc
Confidence 34555665555544444455666778888765 99999999999987554
No 261
>PF01023 S_100: S-100/ICaBP type calcium binding domain; InterPro: IPR013787 The calcium-binding domain found in S100 and CaBP-9k proteins is a subfamily of the EF-hand calcium-binding domain []. S100s are small dimeric acidic calcium and zinc-binding proteins abundant in the brain, with S100B playing an important role in modulating the proliferation and differentiation of neurons and glia cells []. S100 proteins have two different types of calcium-binding sites: a low affinity one with a special structure, and a 'normal' EF-hand type high-affinity site. Calbindin-D9k (CaBP-9k) also belong to this family of proteins, but it does not form dimers. CaBP-9k is a cytosolic protein expressed in a variety of tissues. Although its precise function is unknown, it appears to be under the control of the steroid hormones oestrogen and progesterone in the female reproductive system []. In the intestine, CaBP-9k may be involved in calcium absorption by mediating intracellular diffusion []. This entry represents a subdomain of the calcium-binding domain found in S100, CaBP-9k, and related proteins.; PDB: 2RGI_A 4DUQ_B 2KAY_B 2KAX_A 2CNP_A 1CNP_A 1A03_A 1JWD_B 2JTT_A 1XK4_B ....
Probab=21.87 E-value=1.3e+02 Score=20.35 Aligned_cols=28 Identities=11% Similarity=0.134 Sum_probs=16.1
Q ss_pred HHHHHhhhhC-C-CCCCcccHHHHHHHHHH
Q 008641 466 ACELAFAECD-P-DGNGFISENQLEVTIRP 493 (558)
Q Consensus 466 ~~~~~F~~~D-~-d~~G~Is~~E~~~~l~~ 493 (558)
.+..+|..|. . .+...++.+||+.++..
T Consensus 7 ~iI~vFhkYa~~~Gd~~~Lsk~Elk~Ll~~ 36 (44)
T PF01023_consen 7 TIIDVFHKYAGKEGDKDTLSKKELKELLEK 36 (44)
T ss_dssp HHHHHHHHHHTSSSSTTSEEHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCCeEcHHHHHHHHHH
Confidence 3455566553 2 22456777777777664
No 262
>KOG0039 consensus Ferric reductase, NADH/NADPH oxidase and related proteins [Inorganic ion transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=21.66 E-value=1.4e+02 Score=33.36 Aligned_cols=81 Identities=17% Similarity=0.265 Sum_probs=52.5
Q ss_pred CCcccHHHHHHHhccCCcHHHHHHHhhhcCCCCCceeHHHHHHHHHhhccC-------cchhHHHHHHhhhhCCCCCCcc
Q 008641 410 SGCVKLLDFLSVLRLKTCPLSDEIFGFIDVDKNGSITFKQFLYASAHVMKL-------PLFWQACELAFAECDPDGNGFI 482 (558)
Q Consensus 410 ~G~Is~~ef~~~l~~~~~~~~~~lf~~~D~d~~g~Is~~Ef~~~~~~~~~~-------~~~~~~~~~~F~~~D~d~~G~I 482 (558)
+| ++.+|+. .......+.++-+|..+|. ++|.++-+|+...+...... ....+....+++..|.++.|++
T Consensus 2 ~~-~~~~~~~-~~~~~~d~~l~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 78 (646)
T KOG0039|consen 2 EG-ISFQELK-ITDCSYDDKLQTFFDMYDK-GDGKLTEEEVRELIMSSISANWLSLIKKQTEEYAALIMEELDPDHKGYI 78 (646)
T ss_pred CC-cchhhhc-ccCCChhHHHHHHHHHHhh-hcCCccHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHhhhhcccccccee
Confidence 45 7777777 3344444567777777777 77778877777655433221 1123445667788888888888
Q ss_pred cHHHHHHHHHH
Q 008641 483 SENQLEVTIRP 493 (558)
Q Consensus 483 s~~E~~~~l~~ 493 (558)
..+++..++..
T Consensus 79 ~~~~~~~ll~~ 89 (646)
T KOG0039|consen 79 TNEDLEILLLQ 89 (646)
T ss_pred eecchhHHHHh
Confidence 88888777754
No 263
>cd07316 terB_like_DjlA N-terminal tellurium resistance protein terB-like domain of heat shock DnaJ-like proteins. Tellurium resistance terB-like domain of the DnaJ-like DjlA proteins. This family represents the terB-like domain of DjlA-like proteins, a subgroup of heat shock DnaJ-like proteins. Escherichia coli DjlA is a type III membrane protein with a small N-terminal transmembrane region and DnaJ-like domain on the extreme C-terminus. Overproduction has been shown to activate the RcsC pathway, which regulates the production of the capsular exopolysaccharide colanic acid. The specific function of this domain is unknown.
Probab=21.58 E-value=2.6e+02 Score=22.51 Aligned_cols=9 Identities=22% Similarity=0.302 Sum_probs=5.3
Q ss_pred CCcccHHHH
Q 008641 410 SGCVKLLDF 418 (558)
Q Consensus 410 ~G~Is~~ef 418 (558)
||.++..|.
T Consensus 13 DG~v~~~E~ 21 (106)
T cd07316 13 DGRVSEAEI 21 (106)
T ss_pred cCCcCHHHH
Confidence 566666665
No 264
>TIGR01639 P_fal_TIGR01639 Plasmodium falciparum uncharacterized domain TIGR01639. This model represents a conserved sequence region of about 60 amino acids found in over 40 predicted proteins of Plasmodium falciparum. It is not found elsewhere, including closely related species such as Plasmodium yoelii. No member of this family is characterized.
Probab=21.35 E-value=2.1e+02 Score=20.92 Aligned_cols=32 Identities=13% Similarity=0.099 Sum_probs=25.9
Q ss_pred CcccHHHHHHHHHHhCCCCcHHHHHHHHHHhC
Q 008641 480 GFISENQLEVTIRPAIPDLNKYEIDSLFRLFD 511 (558)
Q Consensus 480 G~Is~~E~~~~l~~~~~~~~~~~i~~lf~~~D 511 (558)
-.+|.+|+...+..++...+.+++-.++...-
T Consensus 8 ~~lTeEEl~~~i~~L~~~~~~~dm~~IW~~v~ 39 (61)
T TIGR01639 8 KKLSKEELNELINSLDEIPNRNDMLIIWNQVH 39 (61)
T ss_pred HHccHHHHHHHHHhhcCCCCHHHHHHHHHHHH
Confidence 45788888888888888888888888887664
No 265
>PF03960 ArsC: ArsC family; InterPro: IPR006660 Several bacterial taxon have a chromosomal resistance system, encoded by the ars operon, for the detoxification of arsenate, arsenite, and antimonite []. This system transports arsenite and antimonite out of the cell. The pump is composed of two polypeptides, the products of the arsA and arsB genes. This two-subunit enzyme produces resistance to arsenite and antimonite. Arsenate, however, must first be reduced to arsenite before it is extruded. A third gene, arsC, expands the substrate specificity to allow for arsenate pumping and resistance. ArsC is an approximately 150-residue arsenate reductase that uses reduced glutathione (GSH) to convert arsenate to arsenite with a redox active cysteine residue in the active site. ArsC forms an active quaternary complex with GSH, arsenate, and glutaredoxin 1 (Grx1). The three ligands must be present simultaneously for reduction to occur []. The arsC family also comprises the Spx proteins which are GRAM-positive bacterial transcription factors that regulate the transcription of multiple genes in response to disulphide stress []. The arsC protein structure has been solved []. It belongs to the thioredoxin superfamily fold which is defined by a beta-sheet core surrounded by alpha-helices. The active cysteine residue of ArsC is located in the loop between the first beta-strand and the first helix, which is also conserved in the Spx protein and its homologues.; PDB: 2KOK_A 1SK1_A 1SK2_A 1JZW_A 1J9B_A 1S3C_A 1SD8_A 1SD9_A 1I9D_A 1SK0_A ....
Probab=20.86 E-value=68 Score=26.50 Aligned_cols=56 Identities=16% Similarity=0.173 Sum_probs=34.0
Q ss_pred CcccHHHHHHHHHHhCCCCcH--HHHHHHHHHhCCCCCCceeHHHHHHHHHhCcchHH
Q 008641 480 GFISENQLEVTIRPAIPDLNK--YEIDSLFRLFDSDGDGRVSRDDFICCLRKNPLLIA 535 (558)
Q Consensus 480 G~Is~~E~~~~l~~~~~~~~~--~~i~~lf~~~D~d~dG~Is~~eF~~~l~~~~~~~~ 535 (558)
..++.+|+.+++...|.+..+ ..-...|+..+......++-+|.+++|.++|.+++
T Consensus 31 ~p~s~~el~~~l~~~~~~~~~lin~~~~~~k~l~~~~~~~~s~~e~i~~l~~~p~Lik 88 (110)
T PF03960_consen 31 EPLSREELRELLSKLGNGPDDLINTRSKTYKELGKLKKDDLSDEELIELLLENPKLIK 88 (110)
T ss_dssp S---HHHHHHHHHHHTSSGGGGB-TTSHHHHHTTHHHCTTSBHHHHHHHHHHSGGGB-
T ss_pred CCCCHHHHHHHHHHhcccHHHHhcCccchHhhhhhhhhhhhhhHHHHHHHHhChhhee
Confidence 358899999999888732211 00112455555223456899999999999998764
No 266
>TIGR03703 plsB glycerol-3-phosphate O-acyltransferase. Members of this protein family are PlsB, glycerol-3-phosphate O-acyltransferase, present in E. coli and numerous related species. In many bacteria, PlsB is not found, and appears to be replaced by a two enzyme system for 1-acyl-glycerol-3-phosphate biosynthesis, the PlsX/Y system.
Probab=20.49 E-value=6e+02 Score=29.35 Aligned_cols=24 Identities=8% Similarity=-0.085 Sum_probs=19.6
Q ss_pred CCCCCCEEEeCCCCchhHHHHhhh
Q 008641 172 PRQIAPIVVSNHISYIEPIFFFYE 195 (558)
Q Consensus 172 ~~~~~~iivsNH~S~~D~~~l~~~ 195 (558)
.+++|.+||--+.|..|.+++-..
T Consensus 26 ~~~~p~~yvl~~~s~~d~~~l~~~ 49 (799)
T TIGR03703 26 DPERPIVYVLPTRSLSDLLALQKA 49 (799)
T ss_pred CCCCCEEEEeCCCchhhHHHHHHH
Confidence 456789999999999997777555
No 267
>PF05399 EVI2A: Ectropic viral integration site 2A protein (EVI2A); InterPro: IPR008608 This family contains several mammalian ectropic viral integration site 2A (EVI2A) proteins. The function of this protein is unknown although it is thought to be a membrane protein and may function as an oncogene in retrovirus induced myeloid tumours [, ].; GO: 0016021 integral to membrane
Probab=20.26 E-value=5.1e+02 Score=24.28 Aligned_cols=13 Identities=31% Similarity=0.542 Sum_probs=6.5
Q ss_pred cccCCCCCCCEEE
Q 008641 168 GKPAPRQIAPIVV 180 (558)
Q Consensus 168 g~~~~~~~~~iiv 180 (558)
|+..++..+.++.
T Consensus 168 gKRqpRSNGDFLA 180 (227)
T PF05399_consen 168 GKRQPRSNGDFLA 180 (227)
T ss_pred hccCCCcccceee
Confidence 4455555554443
No 268
>PF07499 RuvA_C: RuvA, C-terminal domain; InterPro: IPR011114 In prokaryotes, RuvA, RuvB, and RuvC process the universal DNA intermediate of homologous recombination, termed Holliday junction. The tetrameric DNA helicase RuvA specifically binds to the Holliday junction and facilitates the isomerization of the junction from the stacked folded configuration to the square-planar structure []. In the RuvA tetramer, each subunit consists of three domains, I, II and III, where I and II form the major core that is responsible for Holliday junction binding and base pair rearrangements of Holliday junction executed at the crossover point, whereas domain III regulates branch migration through direct contact with RuvB. The domain represents the C-terminal domain III of RuvA. This domain plays a significant role in the ATP-dependent branch migration of the hetero-duplex through direct contact with RuvB []. Within the Holliday junction, this domain makes no interaction with the DNA.; GO: 0005524 ATP binding, 0009378 four-way junction helicase activity, 0006281 DNA repair, 0006310 DNA recombination, 0009379 Holliday junction helicase complex; PDB: 1HJP_A 1CUK_A 1C7Y_A 1IXS_A 1IXR_B 1BVS_E 2ZTC_A 2ZTD_B 2H5X_A.
Probab=20.13 E-value=3e+02 Score=18.78 Aligned_cols=39 Identities=8% Similarity=-0.053 Sum_probs=26.8
Q ss_pred HHHHHHHHHHhCCCCcHHHHHHHHHHhCCCCCCceeHHHHHHH
Q 008641 484 ENQLEVTIRPAIPDLNKYEIDSLFRLFDSDGDGRVSRDDFICC 526 (558)
Q Consensus 484 ~~E~~~~l~~~~~~~~~~~i~~lf~~~D~d~dG~Is~~eF~~~ 526 (558)
.+|....|..+| .++.++..+.+.... ...++.++.++.
T Consensus 3 ~~d~~~AL~~LG--y~~~e~~~av~~~~~--~~~~~~e~~ik~ 41 (47)
T PF07499_consen 3 LEDALEALISLG--YSKAEAQKAVSKLLE--KPGMDVEELIKQ 41 (47)
T ss_dssp HHHHHHHHHHTT--S-HHHHHHHHHHHHH--STTS-HHHHHHH
T ss_pred HHHHHHHHHHcC--CCHHHHHHHHHHhhc--CCCCCHHHHHHH
Confidence 356777887776 788888888888875 445667776653
Done!