Query 008643
Match_columns 558
No_of_seqs 548 out of 3968
Neff 7.6
Searched_HMMs 46136
Date Thu Mar 28 14:45:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008643.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008643hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0661 AarF Predicted unusual 100.0 7.4E-84 1.6E-88 695.0 47.9 416 29-449 52-467 (517)
2 PRK04750 ubiB putative ubiquin 100.0 6.2E-80 1.3E-84 669.1 45.7 419 2-420 5-441 (537)
3 TIGR01982 UbiB 2-polyprenylphe 100.0 2.1E-76 4.5E-81 634.6 48.2 419 1-420 1-434 (437)
4 KOG1235 Predicted unusual prot 100.0 1.1E-63 2.3E-68 535.9 31.2 289 35-327 94-389 (538)
5 KOG1236 Predicted unusual prot 100.0 2.6E-47 5.7E-52 386.5 28.4 375 34-409 120-555 (565)
6 KOG0581 Mitogen-activated prot 100.0 4.6E-33 9.9E-38 280.0 9.7 250 108-415 85-344 (364)
7 KOG0595 Serine/threonine-prote 100.0 2.3E-31 5E-36 270.0 10.6 198 107-361 15-224 (429)
8 KOG0575 Polo-like serine/threo 100.0 3.9E-31 8.5E-36 279.9 11.4 247 107-435 23-277 (592)
9 KOG0616 cAMP-dependent protein 100.0 8.8E-31 1.9E-35 255.7 9.5 229 103-388 44-274 (355)
10 KOG0598 Ribosomal protein S6 k 100.0 2.8E-30 6E-35 259.9 7.9 235 103-397 25-265 (357)
11 KOG0615 Serine/threonine prote 100.0 2.7E-30 5.8E-35 261.9 5.2 186 107-347 177-379 (475)
12 KOG0592 3-phosphoinositide-dep 100.0 8.4E-30 1.8E-34 265.9 7.5 246 107-403 78-332 (604)
13 KOG1234 ABC (ATP binding casse 100.0 7.5E-28 1.6E-32 233.5 17.0 330 60-400 7-349 (363)
14 KOG0583 Serine/threonine prote 100.0 5.9E-29 1.3E-33 261.6 9.4 228 107-398 22-264 (370)
15 KOG0597 Serine-threonine prote 100.0 2.4E-28 5.3E-33 255.1 12.1 244 108-415 8-260 (808)
16 KOG0605 NDR and related serine 100.0 4.6E-28 1E-32 253.1 12.8 199 104-346 142-385 (550)
17 KOG0694 Serine/threonine prote 99.9 5.4E-28 1.2E-32 258.8 13.0 231 107-387 373-604 (694)
18 KOG0591 NIMA (never in mitosis 99.9 2.5E-27 5.3E-32 230.1 13.1 236 107-401 24-273 (375)
19 KOG0593 Predicted protein kina 99.9 4.2E-27 9.1E-32 230.5 12.8 183 108-345 8-198 (396)
20 KOG0588 Serine/threonine prote 99.9 5.9E-27 1.3E-31 249.2 13.5 230 107-400 17-254 (786)
21 KOG0578 p21-activated serine/t 99.9 1.5E-26 3.2E-31 243.5 16.3 269 69-401 239-515 (550)
22 KOG0611 Predicted serine/threo 99.9 5.3E-27 1.2E-31 236.7 9.9 229 107-400 58-294 (668)
23 KOG0585 Ca2+/calmodulin-depend 99.9 9.5E-27 2.1E-31 239.6 10.9 254 107-401 102-364 (576)
24 KOG0600 Cdc2-related protein k 99.9 1.4E-26 3E-31 240.3 7.1 198 94-345 111-316 (560)
25 KOG0580 Serine/threonine prote 99.9 2.6E-26 5.6E-31 218.8 8.3 237 103-400 22-264 (281)
26 PTZ00263 protein kinase A cata 99.9 6.5E-26 1.4E-30 235.7 10.3 235 107-401 23-258 (329)
27 KOG0198 MEKK and related serin 99.9 1.2E-26 2.6E-31 236.3 4.7 239 107-401 22-268 (313)
28 cd05612 STKc_PRKX_like Catalyt 99.9 2.4E-25 5.2E-30 227.1 14.2 232 107-400 6-240 (291)
29 PF03109 ABC1: ABC1 family; I 99.9 8.7E-26 1.9E-30 199.9 8.1 119 92-212 1-119 (119)
30 KOG0192 Tyrosine kinase specif 99.9 1.8E-25 3.9E-30 233.7 10.3 235 108-400 47-290 (362)
31 cd05571 STKc_PKB Catalytic dom 99.9 9.4E-26 2E-30 233.8 7.5 237 108-401 1-238 (323)
32 cd05590 STKc_nPKC_eta Catalyti 99.9 3.3E-25 7.1E-30 229.5 11.4 235 108-401 1-239 (320)
33 KOG0201 Serine/threonine prote 99.9 5.8E-26 1.3E-30 232.4 5.3 257 95-415 8-267 (467)
34 cd05603 STKc_SGK2 Catalytic do 99.9 4.2E-25 9E-30 228.5 10.3 238 108-401 1-239 (321)
35 cd05585 STKc_YPK1_like Catalyt 99.9 3.8E-25 8.3E-30 228.0 9.7 235 110-401 1-236 (312)
36 cd05593 STKc_PKB_gamma Catalyt 99.9 2.8E-25 6.2E-30 230.9 8.7 236 108-400 1-237 (328)
37 cd05589 STKc_PKN Catalytic dom 99.9 6.4E-25 1.4E-29 227.5 11.0 235 108-401 5-244 (324)
38 KOG0661 MAPK related serine/th 99.9 2.4E-25 5.1E-30 229.6 7.5 189 108-345 16-206 (538)
39 cd05575 STKc_SGK Catalytic dom 99.9 4.7E-25 1E-29 228.4 9.7 236 108-400 1-238 (323)
40 cd05595 STKc_PKB_beta Catalyti 99.9 2.1E-25 4.6E-30 231.2 6.9 236 108-400 1-237 (323)
41 cd05602 STKc_SGK1 Catalytic do 99.9 6.3E-25 1.4E-29 227.7 10.2 237 108-400 1-238 (325)
42 cd05631 STKc_GRK4 Catalytic do 99.9 6.4E-24 1.4E-28 215.8 16.7 241 107-401 5-248 (285)
43 cd05616 STKc_cPKC_beta Catalyt 99.9 7.5E-24 1.6E-28 219.4 17.4 239 107-401 5-244 (323)
44 cd05588 STKc_aPKC Catalytic do 99.9 6.7E-24 1.4E-28 220.6 17.1 243 108-401 1-248 (329)
45 cd05618 STKc_aPKC_iota Catalyt 99.9 1.1E-24 2.4E-29 226.6 11.2 240 108-401 1-248 (329)
46 cd05592 STKc_nPKC_theta_delta 99.9 1.1E-24 2.5E-29 225.1 10.9 234 108-400 1-238 (316)
47 KOG0659 Cdk activating kinase 99.9 3.1E-24 6.8E-29 207.3 13.0 212 107-375 7-223 (318)
48 cd05617 STKc_aPKC_zeta Catalyt 99.9 7.2E-24 1.6E-28 220.1 16.6 244 108-401 1-246 (327)
49 cd05620 STKc_nPKC_delta Cataly 99.9 1.2E-24 2.6E-29 224.9 9.9 238 108-401 1-239 (316)
50 cd05615 STKc_cPKC_alpha Cataly 99.9 1.9E-24 4.2E-29 224.0 11.5 239 107-401 5-244 (323)
51 KOG0612 Rho-associated, coiled 99.9 1.7E-24 3.7E-29 241.5 11.6 218 104-375 76-303 (1317)
52 cd05628 STKc_NDR1 Catalytic do 99.9 9.4E-25 2E-29 230.0 8.9 198 107-346 6-233 (363)
53 cd05594 STKc_PKB_alpha Catalyt 99.9 5E-25 1.1E-29 228.4 6.6 236 108-400 1-238 (325)
54 KOG4250 TANK binding protein k 99.9 1.1E-24 2.4E-29 234.0 9.1 197 102-347 13-222 (732)
55 cd05604 STKc_SGK3 Catalytic do 99.9 1.3E-24 2.9E-29 225.2 9.4 190 108-345 1-192 (325)
56 cd05621 STKc_ROCK2 Catalytic d 99.9 1.3E-24 2.8E-29 230.0 9.3 192 107-345 48-243 (370)
57 KOG0574 STE20-like serine/thre 99.9 6.9E-25 1.5E-29 214.3 6.6 205 85-344 18-224 (502)
58 cd05591 STKc_nPKC_epsilon Cata 99.9 1.3E-23 2.7E-28 217.6 16.3 238 108-401 1-239 (321)
59 KOG0577 Serine/threonine prote 99.9 5.2E-24 1.1E-28 223.4 13.2 246 94-404 20-273 (948)
60 PTZ00426 cAMP-dependent protei 99.9 2.2E-24 4.8E-29 225.5 10.5 189 107-346 35-225 (340)
61 cd05599 STKc_NDR_like Catalyti 99.9 1.1E-24 2.3E-29 229.3 7.9 198 107-346 6-236 (364)
62 KOG0589 Serine/threonine prote 99.9 2E-24 4.4E-29 225.8 9.6 238 108-403 10-252 (426)
63 cd05584 STKc_p70S6K Catalytic 99.9 2.2E-24 4.8E-29 223.5 9.9 236 108-401 2-243 (323)
64 KOG0660 Mitogen-activated prot 99.9 1.5E-24 3.2E-29 217.9 8.2 215 107-371 27-245 (359)
65 cd05608 STKc_GRK1 Catalytic do 99.9 1.5E-24 3.2E-29 219.9 8.3 238 110-400 1-243 (280)
66 PLN00034 mitogen-activated pro 99.9 2.2E-24 4.7E-29 226.3 9.5 234 107-400 79-319 (353)
67 cd05626 STKc_LATS2 Catalytic d 99.9 2.2E-24 4.8E-29 228.8 9.4 197 108-346 7-245 (381)
68 cd05627 STKc_NDR2 Catalytic do 99.9 8.2E-25 1.8E-29 230.1 5.6 198 107-346 6-233 (360)
69 KOG0690 Serine/threonine prote 99.9 1.4E-23 3E-28 207.2 13.7 237 103-397 168-407 (516)
70 cd05573 STKc_ROCK_NDR_like Cat 99.9 3.7E-24 8E-29 223.5 10.2 196 107-346 6-227 (350)
71 cd05622 STKc_ROCK1 Catalytic d 99.9 2.8E-24 6.2E-29 227.3 9.3 192 107-345 48-243 (371)
72 cd05598 STKc_LATS Catalytic do 99.9 1.5E-24 3.2E-29 229.5 6.9 198 107-346 6-241 (376)
73 cd07878 STKc_p38beta_MAPK11 Ca 99.9 1.6E-23 3.4E-28 218.6 14.4 207 91-346 3-213 (343)
74 cd05096 PTKc_DDR1 Catalytic do 99.9 3.8E-24 8.3E-29 219.2 9.6 209 107-363 10-254 (304)
75 cd05614 STKc_MSK2_N N-terminal 99.9 2.3E-23 5E-28 216.4 15.3 245 107-401 5-254 (332)
76 cd05600 STKc_Sid2p_Dbf2p Catal 99.9 2.9E-24 6.4E-29 223.3 8.6 188 107-345 6-194 (333)
77 cd05587 STKc_cPKC Catalytic do 99.9 2.3E-23 4.9E-28 215.9 15.2 239 107-401 5-244 (324)
78 cd05629 STKc_NDR_like_fungal C 99.9 2.4E-24 5.1E-29 228.1 7.9 198 107-346 6-245 (377)
79 cd05570 STKc_PKC Catalytic dom 99.9 5.3E-24 1.1E-28 220.2 10.0 234 109-401 2-239 (318)
80 cd05625 STKc_LATS1 Catalytic d 99.9 2.5E-24 5.4E-29 228.3 7.6 198 107-346 6-245 (382)
81 KOG4721 Serine/threonine prote 99.9 1.2E-24 2.6E-29 227.4 4.8 216 108-387 130-349 (904)
82 cd05619 STKc_nPKC_theta Cataly 99.9 5.4E-24 1.2E-28 220.1 9.5 237 108-400 1-238 (316)
83 KOG0032 Ca2+/calmodulin-depend 99.9 2.4E-24 5.1E-29 227.0 6.6 185 108-346 41-235 (382)
84 KOG0594 Protein kinase PCTAIRE 99.9 6.2E-24 1.4E-28 213.7 8.8 195 100-345 11-217 (323)
85 KOG0599 Phosphorylase kinase g 99.9 3.1E-24 6.7E-29 207.6 5.5 261 100-415 14-292 (411)
86 cd05605 STKc_GRK4_like Catalyt 99.9 2.2E-23 4.8E-28 211.9 11.7 239 108-400 6-247 (285)
87 cd05596 STKc_ROCK Catalytic do 99.9 6.5E-24 1.4E-28 224.5 7.9 192 107-345 48-243 (370)
88 KOG4236 Serine/threonine prote 99.9 1.7E-23 3.7E-28 217.1 10.1 215 97-371 559-784 (888)
89 KOG0610 Putative serine/threon 99.9 1.6E-23 3.4E-28 213.2 9.4 247 107-422 82-381 (459)
90 cd07848 STKc_CDKL5 Catalytic d 99.9 4E-23 8.6E-28 209.4 12.2 186 107-346 6-198 (287)
91 PTZ00267 NIMA-related protein 99.9 3.5E-23 7.7E-28 226.2 12.2 239 107-402 72-316 (478)
92 cd05601 STKc_CRIK Catalytic do 99.9 7.8E-24 1.7E-28 219.7 6.3 192 107-345 6-205 (330)
93 cd05582 STKc_RSK_N N-terminal 99.9 8.8E-24 1.9E-28 218.3 6.6 235 108-401 2-241 (318)
94 KOG0658 Glycogen synthase kina 99.9 2.6E-24 5.6E-29 216.5 2.5 187 107-345 29-222 (364)
95 cd06622 PKc_MAPKK_PBS2_like Ca 99.9 1.6E-22 3.4E-27 204.9 15.6 235 108-401 7-254 (286)
96 cd05084 PTKc_Fes Catalytic dom 99.9 2E-23 4.4E-28 207.3 8.8 189 108-344 1-191 (252)
97 cd05597 STKc_DMPK_like Catalyt 99.9 2.7E-23 5.8E-28 216.3 10.0 192 107-345 6-204 (331)
98 cd05102 PTKc_VEGFR3 Catalytic 99.9 1.3E-22 2.9E-27 211.0 15.3 94 247-344 178-271 (338)
99 cd06642 STKc_STK25-YSK1 Cataly 99.9 1.5E-22 3.3E-27 204.2 14.8 193 99-345 3-197 (277)
100 cd07871 STKc_PCTAIRE3 Catalyti 99.9 2.2E-23 4.8E-28 212.1 8.2 189 107-346 10-201 (288)
101 cd07874 STKc_JNK3 Catalytic do 99.9 8.3E-23 1.8E-27 214.3 12.7 199 100-346 14-215 (355)
102 cd05632 STKc_GRK5 Catalytic do 99.9 7.9E-23 1.7E-27 207.8 11.6 239 108-400 6-247 (285)
103 cd05586 STKc_Sck1_like Catalyt 99.9 1.3E-23 2.7E-28 218.3 5.6 238 110-401 1-241 (330)
104 cd06649 PKc_MEK2 Catalytic dom 99.9 1E-22 2.2E-27 211.8 12.3 187 107-346 10-199 (331)
105 cd05624 STKc_MRCK_beta Catalyt 99.9 3.2E-23 6.9E-28 215.7 8.1 193 107-346 6-205 (331)
106 cd05607 STKc_GRK7 Catalytic do 99.9 5.8E-23 1.3E-27 207.9 9.5 188 110-346 1-191 (277)
107 KOG0696 Serine/threonine prote 99.9 2.7E-23 5.8E-28 210.5 6.9 232 104-387 350-586 (683)
108 PTZ00283 serine/threonine prot 99.9 2.9E-22 6.3E-27 219.8 15.2 247 107-402 37-290 (496)
109 KOG0197 Tyrosine kinases [Sign 99.9 3.6E-23 7.8E-28 217.3 7.6 228 108-400 212-448 (468)
110 cd05580 STKc_PKA Catalytic dom 99.9 1.2E-22 2.5E-27 206.8 10.2 233 107-400 6-240 (290)
111 KOG0582 Ste20-like serine/thre 99.9 9E-23 1.9E-27 209.2 9.3 245 107-404 31-288 (516)
112 cd05630 STKc_GRK6 Catalytic do 99.9 1.2E-22 2.6E-27 206.6 10.3 190 108-346 6-198 (285)
113 KOG0663 Protein kinase PITSLRE 99.9 1.8E-23 3.9E-28 207.5 3.5 189 108-345 82-274 (419)
114 PHA03212 serine/threonine kina 99.9 3.2E-22 6.9E-27 213.2 12.4 181 107-345 97-279 (391)
115 cd05623 STKc_MRCK_alpha Cataly 99.9 1.1E-22 2.4E-27 211.6 8.4 192 107-345 6-204 (332)
116 cd06605 PKc_MAPKK Catalytic do 99.9 9E-22 2E-26 196.6 14.7 237 107-400 6-248 (265)
117 cd06650 PKc_MEK1 Catalytic dom 99.9 3.1E-22 6.8E-27 208.5 11.7 189 107-347 10-200 (333)
118 cd06640 STKc_MST4 Catalytic do 99.9 2.3E-22 5.1E-27 203.0 10.5 195 99-345 3-197 (277)
119 cd05145 RIO1_like RIO kinase f 99.9 1.3E-21 2.8E-26 187.8 15.0 180 108-318 3-185 (190)
120 cd07875 STKc_JNK1 Catalytic do 99.9 3.1E-22 6.8E-27 210.7 11.8 191 107-345 29-221 (364)
121 cd06658 STKc_PAK5 Catalytic do 99.9 5.9E-22 1.3E-26 202.3 13.4 191 100-346 22-215 (292)
122 cd05578 STKc_Yank1 Catalytic d 99.9 6.8E-22 1.5E-26 197.1 13.5 234 107-401 5-245 (258)
123 cd05104 PTKc_Kit Catalytic dom 99.9 2.4E-22 5.1E-27 213.0 10.4 93 248-344 219-311 (375)
124 cd07859 STKc_TDY_MAPK_plant Ca 99.9 2.7E-22 5.8E-27 208.2 10.5 193 107-345 5-204 (338)
125 cd05052 PTKc_Abl Catalytic dom 99.9 3.3E-22 7.1E-27 200.3 10.5 234 107-400 11-249 (263)
126 cd05106 PTKc_CSF-1R Catalytic 99.9 2E-22 4.3E-27 213.5 9.2 94 247-344 216-309 (374)
127 KOG0033 Ca2+/calmodulin-depend 99.9 1.3E-23 2.8E-28 200.7 0.1 239 108-403 17-261 (355)
128 cd07853 STKc_NLK Catalytic dom 99.9 4.3E-22 9.3E-27 210.4 11.7 192 107-345 5-201 (372)
129 KOG0667 Dual-specificity tyros 99.9 8.1E-22 1.7E-26 211.4 13.8 185 107-345 191-384 (586)
130 cd07876 STKc_JNK2 Catalytic do 99.9 4.3E-22 9.4E-27 209.3 11.6 192 107-346 26-219 (359)
131 cd07862 STKc_CDK6 Catalytic do 99.9 2.3E-21 5E-26 196.8 16.3 192 107-345 6-205 (290)
132 cd05064 PTKc_EphR_A10 Catalyti 99.9 2.6E-22 5.7E-27 201.6 9.3 238 107-400 10-252 (266)
133 KOG4279 Serine/threonine prote 99.9 2.8E-22 6E-27 213.5 9.8 248 108-417 581-838 (1226)
134 KOG1187 Serine/threonine prote 99.9 8.6E-23 1.9E-27 214.4 5.9 188 104-346 76-275 (361)
135 cd08529 STKc_FA2-like Catalyti 99.9 9.6E-22 2.1E-26 195.1 13.1 189 107-346 5-198 (256)
136 PHA02988 hypothetical protein; 99.9 8.6E-22 1.9E-26 200.4 13.0 235 107-400 25-266 (283)
137 PTZ00036 glycogen synthase kin 99.9 3.1E-22 6.7E-27 216.5 10.1 189 107-346 71-268 (440)
138 cd08219 STKc_Nek3 Catalytic do 99.9 2.8E-22 6.1E-27 199.4 8.6 236 107-400 5-243 (255)
139 cd07869 STKc_PFTAIRE1 Catalyti 99.9 1.8E-22 3.9E-27 206.8 7.4 189 107-346 10-201 (303)
140 cd06635 STKc_TAO1 Catalytic do 99.9 2.6E-21 5.7E-26 199.8 16.0 251 88-401 13-269 (317)
141 KOG4645 MAPKKK (MAP kinase kin 99.9 4.1E-23 9E-28 233.1 2.3 237 107-400 1240-1485(1509)
142 cd05085 PTKc_Fer Catalytic dom 99.9 2.6E-21 5.6E-26 191.8 14.9 187 108-344 1-189 (250)
143 cd00192 PTKc Catalytic domain 99.9 7.4E-22 1.6E-26 195.7 11.0 238 108-400 1-251 (262)
144 cd06641 STKc_MST3 Catalytic do 99.9 8.7E-22 1.9E-26 198.9 11.2 196 98-345 2-197 (277)
145 cd06625 STKc_MEKK3_like Cataly 99.9 4.8E-22 1E-26 198.3 9.2 195 107-345 7-203 (263)
146 KOG4717 Serine/threonine prote 99.9 4.8E-22 1E-26 206.0 9.3 232 107-399 23-260 (864)
147 cd05048 PTKc_Ror Catalytic Dom 99.9 5.1E-22 1.1E-26 200.7 9.2 239 107-400 10-270 (283)
148 cd07863 STKc_CDK4 Catalytic do 99.9 1.1E-21 2.4E-26 198.8 11.5 191 107-345 5-203 (288)
149 cd06628 STKc_MAPKKK_Byr2_like 99.9 4.5E-22 9.8E-27 199.2 8.6 203 107-345 5-208 (267)
150 cd06657 STKc_PAK4 Catalytic do 99.9 8.2E-22 1.8E-26 201.4 10.6 184 108-345 26-212 (292)
151 cd05611 STKc_Rim15_like Cataly 99.9 1.4E-21 3E-26 195.1 11.9 188 108-346 2-190 (260)
152 cd06632 STKc_MEKK1_plant Catal 99.9 1.6E-21 3.4E-26 193.6 12.1 189 107-345 5-198 (258)
153 cd05581 STKc_PDK1 Catalytic do 99.9 1.1E-21 2.3E-26 197.3 11.0 231 107-386 6-257 (280)
154 cd07872 STKc_PCTAIRE2 Catalyti 99.9 7.9E-22 1.7E-26 202.7 10.3 188 107-345 11-201 (309)
155 KOG0986 G protein-coupled rece 99.9 1.1E-21 2.5E-26 201.1 11.0 239 108-400 191-432 (591)
156 KOG0193 Serine/threonine prote 99.9 8.3E-22 1.8E-26 208.6 10.3 197 98-347 387-591 (678)
157 cd08229 STKc_Nek7 Catalytic do 99.9 1.2E-21 2.7E-26 196.0 10.7 190 107-346 7-203 (267)
158 KOG0608 Warts/lats-like serine 99.9 2.5E-22 5.4E-27 212.2 5.7 200 100-345 629-867 (1034)
159 cd06659 STKc_PAK6 Catalytic do 99.9 3.2E-21 6.9E-26 197.4 13.7 191 99-345 20-213 (297)
160 PRK13184 pknD serine/threonine 99.9 3.4E-22 7.5E-27 227.7 7.1 198 107-346 7-228 (932)
161 cd06917 STKc_NAK1_like Catalyt 99.9 7.3E-21 1.6E-25 191.6 16.0 192 108-346 7-199 (277)
162 PTZ00284 protein kinase; Provi 99.9 2.5E-21 5.4E-26 211.0 13.5 191 107-346 134-342 (467)
163 cd05633 STKc_GRK3 Catalytic do 99.9 4.3E-21 9.3E-26 194.5 14.2 237 109-398 1-239 (279)
164 cd06654 STKc_PAK1 Catalytic do 99.9 6.6E-22 1.4E-26 202.2 8.2 188 108-346 26-213 (296)
165 cd06655 STKc_PAK2 Catalytic do 99.9 1.3E-21 2.8E-26 200.2 10.3 187 108-345 25-211 (296)
166 cd05088 PTKc_Tie2 Catalytic do 99.9 1.7E-21 3.7E-26 199.9 11.0 187 107-344 12-218 (303)
167 cd05049 PTKc_Trk Catalytic dom 99.9 9.9E-22 2.1E-26 198.1 9.0 190 107-344 10-219 (280)
168 cd05051 PTKc_DDR Catalytic dom 99.9 1.2E-21 2.7E-26 199.2 9.5 208 107-362 10-245 (296)
169 cd08223 STKc_Nek4 Catalytic do 99.9 1.1E-20 2.3E-25 187.9 16.0 191 107-345 5-198 (257)
170 cd06609 STKc_MST3_like Catalyt 99.9 1.2E-21 2.7E-26 197.1 9.4 188 108-345 7-194 (274)
171 cd08224 STKc_Nek6_Nek7 Catalyt 99.9 2.5E-21 5.4E-26 193.4 11.4 192 107-346 7-203 (267)
172 cd08228 STKc_Nek6 Catalytic do 99.9 2E-21 4.3E-26 194.5 10.6 192 107-346 7-203 (267)
173 PHA03209 serine/threonine kina 99.9 2.5E-21 5.4E-26 203.7 11.8 179 107-344 71-251 (357)
174 cd05068 PTKc_Frk_like Catalyti 99.8 1.2E-21 2.7E-26 195.7 8.9 234 107-400 11-248 (261)
175 cd05108 PTKc_EGFR Catalytic do 99.8 1.1E-20 2.5E-25 194.8 16.3 189 107-344 12-206 (316)
176 cd05572 STKc_cGK_PKG Catalytic 99.8 2.7E-21 5.8E-26 193.2 11.2 188 110-346 1-189 (262)
177 cd05114 PTKc_Tec_Rlk Catalytic 99.8 2E-21 4.4E-26 193.6 10.2 186 107-344 9-196 (256)
178 cd06620 PKc_MAPKK_Byr1_like Ca 99.8 2.2E-21 4.7E-26 196.7 10.5 185 108-346 11-199 (284)
179 PHA03207 serine/threonine kina 99.8 2E-21 4.3E-26 207.0 10.6 184 107-346 97-284 (392)
180 cd05097 PTKc_DDR_like Catalyti 99.8 1.3E-21 2.8E-26 199.7 8.7 208 107-362 10-244 (295)
181 cd05089 PTKc_Tie1 Catalytic do 99.8 2.3E-21 4.9E-26 198.1 10.5 234 107-400 7-262 (297)
182 cd05095 PTKc_DDR2 Catalytic do 99.8 2.8E-21 6.2E-26 197.2 11.2 140 216-359 91-242 (296)
183 cd05147 RIO1_euk RIO kinase fa 99.8 7.1E-21 1.5E-25 182.8 13.3 166 108-297 3-171 (190)
184 cd05090 PTKc_Ror1 Catalytic do 99.8 1.1E-21 2.4E-26 198.5 8.1 238 107-400 10-270 (283)
185 KOG1989 ARK protein kinase fam 99.8 1.6E-21 3.5E-26 215.0 9.8 241 107-400 42-298 (738)
186 cd05123 STKc_AGC Catalytic dom 99.8 7.7E-21 1.7E-25 188.0 13.6 235 110-401 1-236 (250)
187 cd06630 STKc_MEKK1 Catalytic d 99.8 5.1E-21 1.1E-25 191.5 12.3 196 107-346 5-205 (268)
188 cd05101 PTKc_FGFR2 Catalytic d 99.8 2.8E-21 6E-26 198.0 10.6 188 107-344 20-234 (304)
189 cd05063 PTKc_EphR_A2 Catalytic 99.8 1.4E-21 3E-26 196.0 8.1 191 107-344 10-205 (268)
190 cd05148 PTKc_Srm_Brk Catalytic 99.8 2.6E-21 5.7E-26 193.0 10.1 232 107-400 11-248 (261)
191 cd05070 PTKc_Fyn_Yrk Catalytic 99.8 1.3E-20 2.7E-25 188.3 15.0 234 108-401 12-248 (260)
192 cd06623 PKc_MAPKK_plant_like C 99.8 2.7E-21 6E-26 192.5 10.1 189 107-346 6-197 (264)
193 cd06637 STKc_TNIK Catalytic do 99.8 2.3E-21 5.1E-26 194.5 9.6 200 97-345 3-212 (272)
194 cd06629 STKc_MAPKKK_Bck1_like 99.8 3.1E-21 6.7E-26 193.8 10.4 205 102-345 1-208 (272)
195 cd05091 PTKc_Ror2 Catalytic do 99.8 2.9E-21 6.3E-26 195.4 10.3 189 108-344 11-221 (283)
196 cd05609 STKc_MAST Catalytic do 99.8 1.7E-21 3.6E-26 199.9 8.6 196 107-346 6-213 (305)
197 cd05033 PTKc_EphR Catalytic do 99.8 3.7E-21 8E-26 192.8 10.9 190 107-344 9-203 (266)
198 cd05034 PTKc_Src_like Catalyti 99.8 4.6E-21 9.9E-26 191.2 11.5 186 107-344 11-199 (261)
199 cd05059 PTKc_Tec_like Catalyti 99.8 1.8E-21 3.9E-26 194.1 8.5 186 107-344 9-196 (256)
200 cd05047 PTKc_Tie Catalytic dom 99.8 2.6E-21 5.6E-26 194.7 9.6 186 108-344 1-206 (270)
201 cd05115 PTKc_Zap-70 Catalytic 99.8 1.9E-20 4.2E-25 187.2 15.8 237 109-400 2-242 (257)
202 cd06631 STKc_YSK4 Catalytic do 99.8 2.4E-21 5.1E-26 193.9 9.1 200 107-346 5-205 (265)
203 cd05577 STKc_GRK Catalytic dom 99.8 1.4E-21 3.1E-26 197.3 7.6 236 110-399 1-239 (277)
204 cd05122 PKc_STE Catalytic doma 99.8 2.8E-21 6.1E-26 190.1 9.5 188 107-346 5-194 (253)
205 cd05579 STKc_MAST_like Catalyt 99.8 9.7E-21 2.1E-25 188.3 13.4 192 110-345 1-197 (265)
206 cd06615 PKc_MEK Catalytic doma 99.8 3E-21 6.4E-26 198.6 10.0 188 107-346 6-195 (308)
207 cd05082 PTKc_Csk Catalytic dom 99.8 2.3E-20 4.9E-25 186.0 16.1 230 107-400 11-243 (256)
208 cd05105 PTKc_PDGFR_alpha Catal 99.8 2E-21 4.3E-26 207.6 9.0 94 247-344 241-334 (400)
209 cd05072 PTKc_Lyn Catalytic dom 99.8 2.1E-21 4.5E-26 193.9 8.6 186 107-344 11-199 (261)
210 cd06613 STKc_MAP4K3_like Catal 99.8 6.8E-21 1.5E-25 189.7 12.2 185 107-345 8-200 (262)
211 smart00219 TyrKc Tyrosine kina 99.8 3.4E-21 7.3E-26 191.0 10.0 188 108-344 5-199 (258)
212 cd05606 STKc_beta_ARK Catalyti 99.8 1.2E-20 2.6E-25 191.0 14.2 189 109-346 1-193 (278)
213 cd05039 PTKc_Csk_like Catalyti 99.8 4.3E-21 9.4E-26 191.0 10.7 181 107-344 11-194 (256)
214 cd07850 STKc_JNK Catalytic dom 99.8 1E-20 2.2E-25 198.4 13.5 189 107-346 21-214 (353)
215 cd05109 PTKc_HER2 Catalytic do 99.8 4.2E-20 9.1E-25 186.6 17.5 237 107-400 12-255 (279)
216 cd07868 STKc_CDK8 Catalytic do 99.8 3.9E-21 8.4E-26 198.0 10.1 191 105-345 4-212 (317)
217 KOG0603 Ribosomal protein S6 k 99.8 1.5E-21 3.2E-26 208.6 7.0 228 107-401 327-555 (612)
218 KOG0695 Serine/threonine prote 99.8 6.7E-21 1.5E-25 188.8 11.1 232 101-379 248-483 (593)
219 cd06611 STKc_SLK_like Catalyti 99.8 9.4E-21 2E-25 191.3 12.4 188 108-346 11-205 (280)
220 cd06656 STKc_PAK3 Catalytic do 99.8 1E-21 2.3E-26 200.9 5.5 189 107-346 24-212 (297)
221 cd05113 PTKc_Btk_Bmx Catalytic 99.8 4E-21 8.6E-26 192.0 9.5 185 108-344 10-196 (256)
222 cd06612 STKc_MST1_2 Catalytic 99.8 6.7E-21 1.5E-25 189.1 11.1 186 107-345 8-195 (256)
223 cd05040 PTKc_Ack_like Catalyti 99.8 3.1E-20 6.8E-25 184.8 15.9 189 108-344 1-195 (257)
224 cd05057 PTKc_EGFR_like Catalyt 99.8 7.7E-20 1.7E-24 184.7 18.9 237 108-400 13-255 (279)
225 KOG0586 Serine/threonine prote 99.8 8.1E-22 1.8E-26 209.6 4.6 219 107-386 61-286 (596)
226 cd06643 STKc_SLK Catalytic dom 99.8 9E-21 1.9E-25 191.8 11.9 187 108-345 11-204 (282)
227 KOG0194 Protein tyrosine kinas 99.8 3.8E-22 8.2E-27 212.3 1.9 239 107-400 162-407 (474)
228 cd06627 STKc_Cdc7_like Catalyt 99.8 5.6E-21 1.2E-25 189.0 10.1 190 107-346 5-196 (254)
229 PF00069 Pkinase: Protein kina 99.8 6.6E-22 1.4E-26 196.6 3.4 189 108-346 5-196 (260)
230 cd05574 STKc_phototropin_like 99.8 4E-21 8.7E-26 197.8 9.3 198 107-346 6-229 (316)
231 cd05062 PTKc_IGF-1R Catalytic 99.8 3.5E-21 7.5E-26 194.3 8.6 190 107-344 11-216 (277)
232 PHA03211 serine/threonine kina 99.8 4.3E-21 9.3E-26 208.2 9.9 183 107-345 174-358 (461)
233 cd05069 PTKc_Yes Catalytic dom 99.8 3.5E-20 7.5E-25 185.3 15.7 233 107-400 11-247 (260)
234 cd05044 PTKc_c-ros Catalytic d 99.8 4.6E-21 1E-25 192.0 9.0 236 109-400 2-257 (269)
235 cd06619 PKc_MKK5 Catalytic dom 99.8 5E-21 1.1E-25 193.7 9.3 183 108-345 7-189 (279)
236 cd05116 PTKc_Syk Catalytic dom 99.8 2.3E-20 4.9E-25 186.3 13.9 238 109-400 2-242 (257)
237 cd06645 STKc_MAP4K3 Catalytic 99.8 2.6E-21 5.5E-26 193.9 6.9 187 108-345 15-205 (267)
238 cd05071 PTKc_Src Catalytic dom 99.8 6.2E-21 1.3E-25 191.2 9.7 185 107-344 11-198 (262)
239 cd06638 STKc_myosinIIIA Cataly 99.8 5.8E-21 1.3E-25 193.3 9.5 187 107-345 23-225 (286)
240 cd08220 STKc_Nek8 Catalytic do 99.8 9.4E-21 2E-25 188.0 10.7 187 107-345 5-197 (256)
241 PTZ00266 NIMA-related protein 99.8 3.5E-21 7.5E-26 220.5 8.4 191 107-346 18-240 (1021)
242 KOG0579 Ste20-like serine/thre 99.8 2.4E-20 5.2E-25 197.1 14.0 236 109-403 39-283 (1187)
243 cd07873 STKc_PCTAIRE1 Catalyti 99.8 5.4E-21 1.2E-25 195.6 9.0 189 107-346 11-202 (301)
244 PHA03390 pk1 serine/threonine- 99.8 6.1E-21 1.3E-25 192.2 9.2 180 109-347 23-204 (267)
245 cd05035 PTKc_Axl_like Catalyti 99.8 4.9E-20 1.1E-24 184.6 15.7 239 108-400 5-259 (273)
246 cd05067 PTKc_Lck_Blk Catalytic 99.8 7.3E-21 1.6E-25 190.0 9.7 184 108-344 12-198 (260)
247 cd05041 PTKc_Fes_like Catalyti 99.8 6.1E-21 1.3E-25 189.2 9.0 188 108-344 1-190 (251)
248 cd06644 STKc_STK10_LOK Catalyt 99.8 1.1E-20 2.3E-25 192.4 10.9 194 99-345 11-211 (292)
249 cd06648 STKc_PAK_II Catalytic 99.8 1.3E-20 2.7E-25 191.6 11.4 187 108-345 25-211 (285)
250 cd08225 STKc_Nek5 Catalytic do 99.8 1.7E-20 3.7E-25 186.3 12.1 186 107-346 5-199 (257)
251 cd07880 STKc_p38gamma_MAPK12 C 99.8 8.6E-21 1.9E-25 198.4 10.3 206 91-345 3-212 (343)
252 cd07841 STKc_CDK7 Catalytic do 99.8 6.3E-21 1.4E-25 194.4 9.0 189 108-345 6-199 (298)
253 cd05066 PTKc_EphR_A Catalytic 99.8 5.7E-21 1.2E-25 191.7 8.5 191 107-344 9-204 (267)
254 cd06633 STKc_TAO3 Catalytic do 99.8 2E-20 4.4E-25 192.9 12.9 245 94-401 15-265 (313)
255 cd07877 STKc_p38alpha_MAPK14 C 99.8 1.4E-20 3E-25 197.0 11.7 191 107-346 22-215 (345)
256 cd06624 STKc_ASK Catalytic dom 99.8 1.2E-20 2.5E-25 189.4 10.7 189 107-346 13-208 (268)
257 cd08221 STKc_Nek9 Catalytic do 99.8 8.3E-21 1.8E-25 188.8 9.5 188 108-345 6-197 (256)
258 cd08218 STKc_Nek1 Catalytic do 99.8 1.6E-20 3.4E-25 186.8 11.4 189 107-345 5-197 (256)
259 cd06614 STKc_PAK Catalytic dom 99.8 1.1E-20 2.3E-25 191.7 10.3 187 108-346 25-213 (286)
260 cd05098 PTKc_FGFR1 Catalytic d 99.8 6.2E-21 1.3E-25 195.8 8.6 190 107-344 23-237 (307)
261 cd05032 PTKc_InsR_like Catalyt 99.8 8.6E-21 1.9E-25 190.9 9.5 239 107-400 11-265 (277)
262 cd05037 PTK_Jak_rpt1 Pseudokin 99.8 1.3E-20 2.9E-25 187.2 10.7 119 217-345 73-202 (259)
263 cd05060 PTKc_Syk_like Catalyti 99.8 6.2E-20 1.3E-24 183.0 15.5 236 109-400 2-242 (257)
264 cd06646 STKc_MAP4K5 Catalytic 99.8 4.2E-21 9.2E-26 192.3 7.1 187 107-345 14-205 (267)
265 cd05079 PTKc_Jak1_rpt2 Catalyt 99.8 7.7E-20 1.7E-24 185.3 16.3 192 108-345 10-208 (284)
266 cd05065 PTKc_EphR_B Catalytic 99.8 8.2E-21 1.8E-25 190.6 9.0 191 107-344 9-206 (269)
267 PHA02882 putative serine/threo 99.8 4.1E-20 8.9E-25 188.9 14.4 202 107-345 17-229 (294)
268 cd06608 STKc_myosinIII_like Ca 99.8 2.1E-20 4.6E-25 187.1 11.9 193 107-346 11-215 (275)
269 cd06647 STKc_PAK_I Catalytic d 99.8 8.4E-21 1.8E-25 193.8 9.1 187 107-346 24-212 (293)
270 cd05111 PTK_HER3 Pseudokinase 99.8 1.7E-19 3.6E-24 182.6 18.5 124 217-344 81-206 (279)
271 cd05075 PTKc_Axl Catalytic dom 99.8 5.4E-20 1.2E-24 184.6 14.8 240 108-400 5-258 (272)
272 cd05103 PTKc_VEGFR2 Catalytic 99.8 4.1E-20 9E-25 193.2 14.4 94 247-344 183-276 (343)
273 cd05083 PTKc_Chk Catalytic dom 99.8 5.4E-21 1.2E-25 190.3 7.3 179 107-344 11-192 (254)
274 cd06626 STKc_MEKK4 Catalytic d 99.8 1.7E-20 3.6E-25 187.1 10.8 193 107-346 5-203 (264)
275 cd07839 STKc_CDK5 Catalytic do 99.8 2E-20 4.4E-25 189.1 11.6 183 108-345 6-196 (284)
276 cd05054 PTKc_VEGFR Catalytic d 99.8 8.2E-20 1.8E-24 190.7 16.4 94 247-344 177-270 (337)
277 cd06607 STKc_TAO Catalytic dom 99.8 1.8E-20 3.9E-25 192.4 11.3 193 98-345 13-210 (307)
278 cd05583 STKc_MSK_N N-terminal 99.8 3.3E-20 7.2E-25 188.3 12.9 190 108-346 6-205 (288)
279 cd05093 PTKc_TrkB Catalytic do 99.8 8.4E-21 1.8E-25 192.9 8.5 125 216-344 79-217 (288)
280 cd05053 PTKc_FGFR Catalytic do 99.8 1.1E-20 2.4E-25 192.1 9.2 191 107-344 17-229 (293)
281 cd05073 PTKc_Hck Catalytic dom 99.8 1.6E-20 3.5E-25 187.7 10.2 185 107-344 11-198 (260)
282 cd06639 STKc_myosinIIIB Cataly 99.8 1E-19 2.2E-24 185.0 16.2 187 107-345 27-229 (291)
283 cd05094 PTKc_TrkC Catalytic do 99.8 5.8E-21 1.3E-25 194.4 7.0 189 107-344 10-220 (291)
284 cd06636 STKc_MAP4K4_6 Catalyti 99.8 1.4E-20 3E-25 190.3 9.5 192 108-346 22-223 (282)
285 cd05058 PTKc_Met_Ron Catalytic 99.8 7.6E-20 1.7E-24 182.5 14.7 193 108-345 1-198 (262)
286 cd06610 STKc_OSR1_SPAK Catalyt 99.8 1.2E-20 2.6E-25 188.3 8.8 194 107-346 6-204 (267)
287 cd05112 PTKc_Itk Catalytic dom 99.8 1.8E-20 3.9E-25 186.4 10.0 186 107-344 9-196 (256)
288 cd07847 STKc_CDKL1_4 Catalytic 99.8 1.5E-20 3.3E-25 189.9 9.6 188 108-345 7-197 (286)
289 cd05055 PTKc_PDGFR Catalytic d 99.8 1.1E-20 2.3E-25 194.0 8.6 190 107-344 40-238 (302)
290 cd07846 STKc_CDKL2_3 Catalytic 99.8 2.4E-20 5.2E-25 188.6 11.0 184 107-345 6-197 (286)
291 cd05613 STKc_MSK1_N N-terminal 99.8 7.2E-20 1.6E-24 186.0 14.6 193 108-346 6-205 (290)
292 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.8 1.1E-20 2.5E-25 188.7 8.5 119 217-345 72-201 (258)
293 cd08215 STKc_Nek Catalytic dom 99.8 2.3E-20 5E-25 184.6 10.5 189 108-345 6-199 (258)
294 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.8 6.5E-20 1.4E-24 185.6 14.0 194 108-347 10-208 (283)
295 cd05042 PTKc_Aatyk Catalytic d 99.8 1.6E-20 3.4E-25 188.5 9.4 125 216-344 67-204 (269)
296 cd08530 STKc_CNK2-like Catalyt 99.8 5.4E-20 1.2E-24 182.4 13.1 235 107-400 5-244 (256)
297 cd05050 PTKc_Musk Catalytic do 99.8 1.7E-20 3.8E-25 190.3 9.7 188 107-344 10-227 (288)
298 cd06634 STKc_TAO2 Catalytic do 99.8 5.7E-20 1.2E-24 189.0 13.7 244 95-401 10-259 (308)
299 KOG0607 MAP kinase-interacting 99.8 3.7E-20 8E-25 182.9 11.2 242 98-387 75-342 (463)
300 cd05056 PTKc_FAK Catalytic dom 99.8 3.9E-20 8.5E-25 185.8 11.7 237 107-400 11-252 (270)
301 cd05099 PTKc_FGFR4 Catalytic d 99.8 1.9E-19 4E-24 185.6 16.9 190 107-344 17-231 (314)
302 cd07879 STKc_p38delta_MAPK13 C 99.8 9.6E-20 2.1E-24 190.3 14.9 198 93-345 5-211 (342)
303 cd06651 STKc_MEKK3 Catalytic d 99.8 1.9E-20 4.2E-25 187.7 9.3 197 107-345 7-205 (266)
304 cd05100 PTKc_FGFR3 Catalytic d 99.8 2.5E-20 5.4E-25 193.9 10.3 124 217-344 91-231 (334)
305 cd08217 STKc_Nek2 Catalytic do 99.8 3.1E-20 6.7E-25 184.6 10.6 236 108-400 6-253 (265)
306 cd06621 PKc_MAPKK_Pek1_like Ca 99.8 5.9E-20 1.3E-24 186.6 12.6 189 107-346 6-200 (287)
307 cd06652 STKc_MEKK2 Catalytic d 99.8 3.3E-20 7.2E-25 185.8 10.6 196 107-345 7-205 (265)
308 cd05077 PTK_Jak1_rpt1 Pseudoki 99.8 2.5E-20 5.3E-25 187.1 9.6 119 216-344 76-204 (262)
309 PLN03225 Serine/threonine-prot 99.8 5.4E-20 1.2E-24 204.4 13.2 193 104-344 133-374 (566)
310 cd05038 PTKc_Jak_rpt2 Catalyti 99.8 1.6E-20 3.6E-25 189.2 8.3 193 108-346 10-209 (284)
311 cd06606 STKc_MAPKKK Catalytic 99.8 2.3E-20 5E-25 184.3 9.1 192 107-345 5-199 (260)
312 cd05110 PTKc_HER4 Catalytic do 99.8 3.2E-20 6.9E-25 190.3 10.4 188 108-344 13-206 (303)
313 cd05045 PTKc_RET Catalytic dom 99.8 2.1E-20 4.5E-25 190.1 8.9 189 108-344 6-224 (290)
314 cd05036 PTKc_ALK_LTK Catalytic 99.8 1.6E-19 3.4E-24 182.4 15.2 190 107-344 11-216 (277)
315 cd08227 PK_STRAD_alpha Pseudok 99.8 1.8E-20 3.9E-25 194.3 8.4 196 108-346 4-207 (327)
316 cd05092 PTKc_TrkA Catalytic do 99.8 1.2E-20 2.5E-25 191.1 6.7 238 107-400 10-268 (280)
317 cd07833 STKc_CDKL Catalytic do 99.8 2.7E-20 5.8E-25 188.2 9.2 185 107-345 6-198 (288)
318 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.8 9.2E-20 2E-24 184.4 13.0 192 107-345 9-207 (284)
319 cd06653 STKc_MEKK3_like_1 Cata 99.8 3.2E-20 7E-25 185.9 9.4 196 107-345 7-205 (264)
320 cd07861 STKc_CDK1_euk Catalyti 99.8 2.3E-20 5.1E-25 188.6 8.3 189 107-345 5-198 (285)
321 cd05107 PTKc_PDGFR_beta Cataly 99.8 1.6E-20 3.5E-25 200.7 7.5 93 248-344 244-336 (401)
322 KOG1035 eIF-2alpha kinase GCN2 99.8 3.2E-20 6.8E-25 209.2 9.8 129 217-345 669-814 (1351)
323 cd07851 STKc_p38 Catalytic dom 99.8 1.4E-19 3E-24 189.2 14.0 195 100-346 12-213 (343)
324 cd05061 PTKc_InsR Catalytic do 99.8 2.2E-19 4.9E-24 182.4 15.2 190 107-344 11-216 (288)
325 cd07867 STKc_CDC2L6 Catalytic 99.8 3.4E-20 7.3E-25 190.7 9.0 190 105-345 4-212 (317)
326 cd06617 PKc_MKK3_6 Catalytic d 99.8 2.7E-19 5.8E-24 180.7 15.2 189 107-346 6-204 (283)
327 cd05576 STKc_RPK118_like Catal 99.8 2.8E-20 6.1E-25 183.9 7.7 173 113-345 4-178 (237)
328 cd07844 STKc_PCTAIRE_like Cata 99.8 5E-20 1.1E-24 187.0 9.5 188 107-345 10-200 (291)
329 cd07832 STKc_CCRK Catalytic do 99.8 4.3E-20 9.4E-25 186.5 8.9 188 108-345 6-197 (286)
330 KOG0668 Casein kinase II, alph 99.8 1.5E-20 3.2E-25 178.2 5.1 269 108-430 44-325 (338)
331 KOG0983 Mitogen-activated prot 99.8 7.5E-21 1.6E-25 184.4 3.1 227 108-397 98-337 (391)
332 KOG0604 MAP kinase-activated p 99.8 8.3E-21 1.8E-25 186.1 3.3 186 105-346 65-260 (400)
333 KOG1095 Protein tyrosine kinas 99.8 1.4E-19 3E-24 205.6 13.4 237 107-398 697-946 (1025)
334 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.8 3.6E-20 7.8E-25 187.3 7.8 118 216-343 88-215 (274)
335 KOG0614 cGMP-dependent protein 99.8 2.5E-20 5.4E-25 193.3 6.6 225 108-386 426-656 (732)
336 cd07860 STKc_CDK2_3 Catalytic 99.8 5.6E-20 1.2E-24 185.9 8.8 185 107-346 5-198 (284)
337 PF07714 Pkinase_Tyr: Protein 99.8 4.8E-20 1E-24 184.8 8.1 238 108-400 5-249 (259)
338 cd05118 STKc_CMGC Catalytic do 99.8 3E-19 6.4E-24 179.9 13.7 184 108-346 5-196 (283)
339 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.8 1.1E-19 2.5E-24 182.5 10.2 188 109-344 2-204 (269)
340 smart00090 RIO RIO-like kinase 99.8 7.5E-19 1.6E-23 174.5 15.7 188 108-328 34-226 (237)
341 cd07855 STKc_ERK5 Catalytic do 99.8 1.6E-19 3.4E-24 187.8 11.2 192 107-345 10-208 (334)
342 KOG1006 Mitogen-activated prot 99.8 1.4E-20 3E-25 181.9 3.0 209 108-374 70-290 (361)
343 cd05046 PTK_CCK4 Pseudokinase 99.8 1.1E-19 2.4E-24 182.9 9.6 188 108-344 11-213 (275)
344 cd06618 PKc_MKK7 Catalytic dom 99.8 3E-19 6.4E-24 182.3 13.0 189 107-346 20-215 (296)
345 cd07843 STKc_CDC2L1 Catalytic 99.8 6.7E-20 1.5E-24 186.5 8.1 190 107-345 10-203 (293)
346 cd07836 STKc_Pho85 Catalytic d 99.8 1.1E-19 2.4E-24 183.6 9.3 185 107-346 5-198 (284)
347 cd07837 STKc_CdkB_plant Cataly 99.8 1.6E-19 3.4E-24 183.6 10.4 190 107-345 6-208 (295)
348 cd07865 STKc_CDK9 Catalytic do 99.8 1.1E-19 2.3E-24 185.9 8.8 197 107-346 17-221 (310)
349 cd07864 STKc_CDK12 Catalytic d 99.8 2.2E-19 4.7E-24 183.2 10.5 196 107-346 12-215 (302)
350 cd08222 STKc_Nek11 Catalytic d 99.8 6.2E-19 1.3E-23 175.9 13.4 192 107-345 5-201 (260)
351 PLN00009 cyclin-dependent kina 99.8 1.5E-19 3.3E-24 183.9 9.1 189 107-345 7-200 (294)
352 cd07849 STKc_ERK1_2_like Catal 99.8 2.4E-19 5.1E-24 186.7 10.4 195 107-346 10-207 (336)
353 KOG0662 Cyclin-dependent kinas 99.8 3.5E-20 7.6E-25 169.9 3.6 202 108-368 8-217 (292)
354 cd07845 STKc_CDK10 Catalytic d 99.8 2.1E-19 4.5E-24 184.5 9.8 190 107-345 12-205 (309)
355 cd05086 PTKc_Aatyk2 Catalytic 99.8 2.4E-19 5.3E-24 180.3 9.9 124 218-345 69-204 (268)
356 cd07835 STKc_CDK1_like Catalyt 99.8 2E-19 4.4E-24 181.7 8.9 184 108-346 5-197 (283)
357 KOG0196 Tyrosine kinase, EPH ( 99.8 8E-20 1.7E-24 197.8 6.1 239 75-365 604-849 (996)
358 cd07838 STKc_CDK4_6_like Catal 99.8 4.6E-19 1E-23 178.9 11.3 190 108-345 5-202 (287)
359 cd08528 STKc_Nek10 Catalytic d 99.8 2.2E-19 4.8E-24 180.0 8.9 198 107-345 5-209 (269)
360 cd07870 STKc_PFTAIRE2 Catalyti 99.8 1.3E-19 2.9E-24 184.1 7.3 189 107-346 10-201 (291)
361 cd07854 STKc_MAPK4_6 Catalytic 99.8 5.1E-19 1.1E-23 184.9 11.8 200 107-346 10-216 (342)
362 KOG1094 Discoidin domain recep 99.8 3.1E-20 6.8E-25 195.3 2.6 215 107-370 543-760 (807)
363 KOG0984 Mitogen-activated prot 99.8 8.3E-20 1.8E-24 170.9 5.1 212 108-377 52-276 (282)
364 PRK10359 lipopolysaccharide co 99.8 7.9E-19 1.7E-23 172.0 12.2 144 107-296 36-187 (232)
365 cd07829 STKc_CDK_like Catalyti 99.8 1.4E-18 3E-23 175.0 14.1 183 108-345 5-195 (282)
366 KOG0664 Nemo-like MAPK-related 99.8 7.6E-20 1.6E-24 177.2 4.5 196 104-345 54-254 (449)
367 cd06616 PKc_MKK4 Catalytic dom 99.8 1.8E-18 3.9E-23 175.4 14.7 188 107-345 9-206 (288)
368 cd05043 PTK_Ryk Pseudokinase d 99.8 2E-18 4.4E-23 174.2 14.6 191 107-344 11-214 (280)
369 cd05074 PTKc_Tyro3 Catalytic d 99.8 2.8E-18 6.1E-23 172.3 15.3 191 108-344 5-210 (273)
370 cd05144 RIO2_C RIO kinase fami 99.8 3.3E-18 7.2E-23 165.0 15.2 162 107-301 20-183 (198)
371 cd08216 PK_STRAD Pseudokinase 99.8 2E-18 4.3E-23 177.4 14.2 143 190-345 58-206 (314)
372 cd07834 STKc_MAPK Catalytic do 99.8 5.9E-19 1.3E-23 182.8 10.3 191 107-345 5-203 (330)
373 PHA03210 serine/threonine kina 99.8 1.4E-19 3E-24 199.0 5.8 138 201-345 221-364 (501)
374 cd08226 PK_STRAD_beta Pseudoki 99.8 3.5E-19 7.6E-24 184.8 8.3 194 109-345 5-206 (328)
375 cd07858 STKc_TEY_MAPK_plant Ca 99.8 1.2E-18 2.7E-23 181.5 12.4 190 107-346 10-206 (337)
376 cd07852 STKc_MAPK15 Catalytic 99.8 1.3E-18 2.9E-23 181.0 12.6 195 108-346 13-210 (337)
377 cd07830 STKc_MAK_like Catalyti 99.8 1.9E-18 4E-23 174.5 13.3 184 108-345 5-195 (283)
378 PRK09188 serine/threonine prot 99.8 1.3E-18 2.9E-23 182.1 12.2 167 107-322 23-193 (365)
379 cd07840 STKc_CDK9_like Catalyt 99.8 3.9E-19 8.5E-24 179.2 7.7 190 108-345 5-198 (287)
380 PTZ00024 cyclin-dependent prot 99.8 3E-19 6.4E-24 185.7 7.0 206 108-345 15-230 (335)
381 smart00220 S_TKc Serine/Threon 99.8 2.3E-18 5E-23 167.8 12.5 177 114-345 1-182 (244)
382 KOG0596 Dual specificity; seri 99.8 1.6E-18 3.5E-23 181.9 12.0 234 108-401 367-619 (677)
383 cd05119 RIO RIO kinase family, 99.8 9E-18 1.9E-22 159.9 16.1 170 108-303 3-174 (187)
384 cd07831 STKc_MOK Catalytic dom 99.8 6.7E-18 1.4E-22 170.2 16.1 187 108-345 5-195 (282)
385 KOG0199 ACK and related non-re 99.8 2.7E-18 5.8E-23 183.8 13.1 238 108-400 116-359 (1039)
386 cd07866 STKc_BUR1 Catalytic do 99.8 1.3E-18 2.8E-23 177.9 9.4 198 107-345 13-223 (311)
387 cd07857 STKc_MPK1 Catalytic do 99.8 2E-18 4.4E-23 179.4 10.7 194 107-345 5-206 (332)
388 KOG1152 Signal transduction se 99.8 8.8E-19 1.9E-23 184.4 6.7 190 107-343 566-763 (772)
389 smart00221 STYKc Protein kinas 99.7 3.8E-18 8.3E-23 165.1 10.4 188 108-344 5-195 (225)
390 KOG0584 Serine/threonine prote 99.7 4E-19 8.7E-24 189.4 3.6 255 94-431 33-300 (632)
391 cd07842 STKc_CDK8_like Catalyt 99.7 7.7E-19 1.7E-23 180.1 4.8 187 108-345 6-212 (316)
392 KOG1025 Epidermal growth facto 99.7 1E-17 2.3E-22 182.1 13.3 234 107-400 701-944 (1177)
393 KOG1151 Tousled-like protein k 99.7 8.1E-19 1.8E-23 179.4 4.4 245 108-415 469-727 (775)
394 KOG0587 Traf2- and Nck-interac 99.7 6.6E-19 1.4E-23 193.2 3.5 188 108-343 25-222 (953)
395 cd00180 PKc Catalytic domain o 99.7 3.7E-17 7.9E-22 154.9 15.1 183 110-342 1-187 (215)
396 KOG2052 Activin A type IB rece 99.7 4.7E-18 1E-22 174.6 9.2 191 107-345 216-422 (513)
397 KOG3653 Transforming growth fa 99.7 2.8E-18 6.1E-23 177.4 7.2 191 108-346 216-421 (534)
398 cd07856 STKc_Sty1_Hog1 Catalyt 99.7 3.2E-17 7E-22 170.4 14.9 185 107-345 15-202 (328)
399 PLN00113 leucine-rich repeat r 99.7 5.8E-18 1.3E-22 200.3 9.7 179 107-347 695-876 (968)
400 KOG1026 Nerve growth factor re 99.7 1.1E-18 2.5E-23 191.9 3.2 235 107-399 491-748 (774)
401 PRK14879 serine/threonine prot 99.7 2.6E-16 5.6E-21 152.7 18.4 144 108-294 2-145 (211)
402 KOG0670 U4/U6-associated splic 99.7 1.9E-17 4.2E-22 172.4 10.2 184 109-345 439-631 (752)
403 KOG4278 Protein tyrosine kinas 99.7 2.4E-17 5.2E-22 174.3 10.9 233 107-400 272-510 (1157)
404 KOG4257 Focal adhesion tyrosin 99.7 2.8E-18 6.2E-23 181.6 3.3 233 107-400 394-636 (974)
405 PLN03224 probable serine/threo 99.7 7.7E-17 1.7E-21 175.8 14.5 124 217-345 258-428 (507)
406 KOG2345 Serine/threonine prote 99.7 2.8E-17 6E-22 158.0 8.4 194 107-344 26-236 (302)
407 KOG0666 Cyclin C-dependent kin 99.7 5.2E-18 1.1E-22 167.3 2.3 196 98-345 20-236 (438)
408 KOG0669 Cyclin T-dependent kin 99.7 2.5E-18 5.5E-23 165.2 -1.6 191 108-346 23-226 (376)
409 TIGR03724 arch_bud32 Kae1-asso 99.7 8.3E-16 1.8E-20 147.9 15.9 140 110-295 2-141 (199)
410 cd05610 STKc_MASTL Catalytic d 99.7 4.5E-17 9.7E-22 185.0 6.3 147 107-295 9-156 (669)
411 KOG1027 Serine/threonine prote 99.7 3.3E-17 7.2E-22 179.2 3.9 257 106-448 513-784 (903)
412 KOG1167 Serine/threonine prote 99.7 8.1E-17 1.8E-21 164.9 6.4 203 107-358 41-287 (418)
413 KOG0576 Mitogen-activated prot 99.6 2.1E-16 4.5E-21 169.1 7.0 180 108-338 21-204 (829)
414 KOG1345 Serine/threonine kinas 99.6 8.2E-16 1.8E-20 149.5 9.3 184 107-345 29-221 (378)
415 KOG0200 Fibroblast/platelet-de 99.6 2.6E-15 5.6E-20 168.5 13.6 232 109-400 303-566 (609)
416 KOG0665 Jun-N-terminal kinase 99.6 1.3E-16 2.8E-21 158.3 2.5 190 104-345 19-213 (369)
417 KOG1163 Casein kinase (serine/ 99.6 3.9E-15 8.5E-20 142.6 10.3 138 108-295 21-166 (341)
418 PRK12274 serine/threonine prot 99.6 1.9E-14 4.1E-19 138.7 13.4 139 107-297 7-146 (218)
419 PRK10345 hypothetical protein; 99.6 7.4E-15 1.6E-19 143.0 9.4 142 107-293 7-159 (210)
420 PRK09605 bifunctional UGMP fam 99.6 4.5E-14 9.8E-19 156.6 15.5 143 106-295 337-479 (535)
421 KOG1165 Casein kinase (serine/ 99.6 5.6E-15 1.2E-19 147.3 7.2 188 107-344 33-231 (449)
422 KOG1164 Casein kinase (serine/ 99.5 7.1E-14 1.5E-18 145.2 12.9 192 107-345 23-233 (322)
423 KOG0671 LAMMER dual specificit 99.5 1E-14 2.2E-19 148.0 5.5 185 108-346 95-306 (415)
424 cd05151 ChoK Choline Kinase (C 99.5 1.7E-13 3.6E-18 128.0 13.4 130 108-294 4-138 (170)
425 PF01163 RIO1: RIO1 family; I 99.5 2.9E-13 6.4E-18 129.3 12.5 175 117-325 1-181 (188)
426 cd05120 APH_ChoK_like Aminogly 99.5 6.5E-13 1.4E-17 119.9 12.8 133 108-295 4-141 (155)
427 cd05146 RIO3_euk RIO kinase fa 99.4 1.3E-12 2.7E-17 125.5 14.0 166 108-299 3-180 (197)
428 PRK01723 3-deoxy-D-manno-octul 99.4 1.2E-12 2.6E-17 130.3 12.9 149 107-294 36-193 (239)
429 PLN00181 protein SPA1-RELATED; 99.4 7.2E-13 1.6E-17 153.8 11.6 147 191-344 33-210 (793)
430 KOG1166 Mitotic checkpoint ser 99.4 1.7E-12 3.7E-17 148.2 12.7 185 107-345 703-899 (974)
431 COG3642 Mn2+-dependent serine/ 99.3 1.5E-11 3.2E-16 115.0 13.5 139 108-292 2-140 (204)
432 KOG0603 Ribosomal protein S6 k 99.3 4.8E-13 1E-17 143.8 3.8 223 110-400 2-229 (612)
433 COG0515 SPS1 Serine/threonine 99.3 7.6E-12 1.6E-16 125.2 10.7 194 108-346 6-208 (384)
434 PF06176 WaaY: Lipopolysacchar 99.3 3.9E-11 8.5E-16 116.1 15.0 81 205-293 104-184 (229)
435 KOG0606 Microtubule-associated 99.3 4.9E-12 1.1E-16 142.3 8.8 240 97-425 80-331 (1205)
436 PF14531 Kinase-like: Kinase-l 99.3 2.8E-12 6.2E-17 129.6 5.7 240 107-387 17-282 (288)
437 COG1718 RIO1 Serine/threonine 99.2 4.3E-10 9.2E-15 110.0 16.7 184 109-325 55-241 (268)
438 KOG1240 Protein kinase contain 99.2 3.5E-12 7.6E-17 143.6 -0.7 203 107-359 28-244 (1431)
439 KOG0590 Checkpoint kinase and 99.1 1.8E-11 3.9E-16 136.6 3.1 119 223-344 400-520 (601)
440 KOG3087 Serine/threonine prote 99.1 1.2E-09 2.5E-14 102.0 14.0 147 106-291 11-164 (229)
441 cd05154 ACAD10_11_like Acyl-Co 99.1 5.4E-10 1.2E-14 108.5 12.0 141 108-295 4-209 (223)
442 smart00750 KIND kinase non-cat 99.1 2.7E-10 5.8E-15 106.9 9.4 83 245-346 19-101 (176)
443 KOG1024 Receptor-like protein 99.1 1E-10 2.2E-15 119.3 6.4 187 202-400 346-542 (563)
444 COG0478 RIO-like serine/threon 99.1 1.3E-09 2.8E-14 107.8 12.9 179 108-323 97-275 (304)
445 KOG4158 BRPK/PTEN-induced prot 99.1 3.8E-11 8.3E-16 122.6 1.4 154 189-345 274-453 (598)
446 PRK15123 lipopolysaccharide co 99.0 7.9E-09 1.7E-13 104.4 13.9 102 186-292 75-194 (268)
447 KOG1290 Serine/threonine prote 98.9 3.7E-09 8.1E-14 110.7 7.8 145 98-279 71-224 (590)
448 PF06293 Kdo: Lipopolysacchari 98.7 3.6E-08 7.9E-13 95.9 9.4 105 186-295 58-173 (206)
449 TIGR02172 Fb_sc_TIGR02172 Fibr 98.6 2.3E-07 5E-12 91.6 11.6 32 262-294 153-184 (226)
450 PRK10593 hypothetical protein; 98.6 6E-07 1.3E-11 92.4 13.7 93 85-232 3-101 (297)
451 PF01636 APH: Phosphotransfera 98.6 1.4E-07 3E-12 91.9 8.6 34 262-295 166-200 (239)
452 cd05150 APH Aminoglycoside 3'- 98.6 1.5E-06 3.3E-11 86.4 16.0 34 262-295 163-196 (244)
453 KOG2270 Serine/threonine prote 98.6 2.3E-06 4.9E-11 88.1 16.9 228 103-371 146-376 (520)
454 KOG1033 eIF-2alpha kinase PEK/ 98.5 3.4E-08 7.4E-13 104.9 1.8 124 218-345 330-458 (516)
455 PRK05231 homoserine kinase; Pr 98.4 3.8E-06 8.3E-11 87.0 15.3 33 261-293 186-218 (319)
456 cd05155 APH_ChoK_like_1 Unchar 98.4 2.2E-06 4.7E-11 85.0 12.8 34 262-295 164-197 (235)
457 PRK09902 hypothetical protein; 98.4 4E-06 8.7E-11 81.2 12.8 149 104-293 20-180 (216)
458 cd05153 HomoserineK_II Homoser 98.4 5.1E-06 1.1E-10 85.0 13.5 31 262-292 175-205 (296)
459 KOG2268 Serine/threonine prote 98.2 3.8E-06 8.2E-11 85.3 9.1 161 108-299 98-258 (465)
460 COG2112 Predicted Ser/Thr prot 98.2 1.6E-05 3.5E-10 74.3 11.3 126 107-291 27-154 (201)
461 KOG0590 Checkpoint kinase and 98.1 3.3E-08 7.2E-13 110.6 -8.9 126 216-345 93-226 (601)
462 TIGR00938 thrB_alt homoserine 98.1 3.5E-05 7.7E-10 79.5 13.6 31 262-292 187-217 (307)
463 PLN02876 acyl-CoA dehydrogenas 98.1 5.4E-05 1.2E-09 88.5 14.9 107 81-232 18-132 (822)
464 cd05157 ETNK_euk Ethanolamine 98.0 5.3E-05 1.1E-09 74.7 12.4 33 262-294 170-203 (235)
465 PRK09550 mtnK methylthioribose 98.0 0.00012 2.6E-09 78.0 15.9 111 80-230 6-117 (401)
466 KOG1023 Natriuretic peptide re 98.0 2.1E-05 4.5E-10 85.1 9.7 144 190-350 6-159 (484)
467 TIGR02721 ycfN_thiK thiamine k 98.0 5.1E-05 1.1E-09 76.1 12.0 32 263-295 147-178 (256)
468 PLN02756 S-methyl-5-thioribose 98.0 0.00016 3.5E-09 76.9 15.0 85 105-228 35-119 (418)
469 PRK06148 hypothetical protein; 97.9 0.00045 9.7E-09 82.4 19.1 56 74-138 4-59 (1013)
470 PF03881 Fructosamin_kin: Fruc 97.8 0.00017 3.7E-09 73.8 11.7 94 83-229 2-97 (288)
471 KOG1243 Protein kinase [Genera 97.7 8.4E-05 1.8E-09 81.8 8.3 175 108-345 18-199 (690)
472 cd05152 MPH2' Macrolide 2'-Pho 97.7 0.00028 6E-09 71.9 11.5 33 263-295 186-219 (276)
473 KOG0601 Cyclin-dependent kinas 97.6 9.4E-06 2E-10 88.0 -0.8 190 107-344 119-322 (524)
474 COG2334 Putative homoserine ki 97.6 0.0014 3E-08 68.4 14.7 29 264-292 199-228 (331)
475 COG3173 Predicted aminoglycosi 97.6 0.0013 2.7E-08 68.0 13.7 35 262-296 198-232 (321)
476 cd05156 ChoK_euk Choline Kinas 97.5 0.00076 1.6E-08 69.2 11.8 34 262-295 179-216 (302)
477 PF10707 YrbL-PhoP_reg: PhoP r 97.5 0.0029 6.2E-08 61.2 14.3 157 107-293 6-173 (199)
478 PRK12396 5-methylribose kinase 97.4 0.0022 4.7E-08 68.1 14.0 90 77-168 6-104 (409)
479 PRK06149 hypothetical protein; 97.3 0.0034 7.4E-08 74.8 14.6 59 71-139 7-65 (972)
480 PRK11768 serine/threonine prot 97.2 0.0062 1.4E-07 63.5 14.6 31 261-293 195-225 (325)
481 TIGR02906 spore_CotS spore coa 97.2 0.003 6.6E-08 64.9 12.0 30 262-292 187-216 (313)
482 TIGR01767 MTRK 5-methylthiorib 97.2 0.00096 2.1E-08 69.9 7.8 30 261-291 191-220 (370)
483 PLN02236 choline kinase 97.1 0.0083 1.8E-07 63.1 14.5 34 262-295 200-234 (344)
484 KOG0195 Integrin-linked kinase 97.1 0.00037 8.1E-09 68.9 3.6 227 108-400 196-433 (448)
485 KOG0601 Cyclin-dependent kinas 97.0 0.0006 1.3E-08 74.2 4.0 184 108-343 271-460 (524)
486 COG3001 Uncharacterized protei 97.0 0.014 3.1E-07 57.2 12.8 96 83-232 2-99 (286)
487 KOG3741 Poly(A) ribonuclease s 96.9 0.011 2.4E-07 63.8 12.0 141 115-296 289-446 (655)
488 PF12260 PIP49_C: Protein-kina 96.8 0.0032 6.9E-08 60.4 7.0 95 196-294 12-113 (188)
489 PLN02421 phosphotransferase, a 96.7 0.018 3.9E-07 60.2 12.2 32 264-295 184-216 (330)
490 PF13095 FTA2: Kinetochore Sim 96.6 0.026 5.6E-07 54.6 11.6 55 219-290 152-206 (207)
491 KOG1266 Protein kinase [Signal 96.4 0.0091 2E-07 61.0 7.3 89 188-284 124-219 (458)
492 KOG2269 Serine/threonine prote 96.0 0.057 1.2E-06 55.5 10.9 196 100-326 251-459 (531)
493 TIGR02904 spore_ysxE spore coa 95.9 0.083 1.8E-06 54.5 11.7 31 262-292 196-226 (309)
494 PRK10271 thiK thiamine kinase; 95.8 0.0078 1.7E-07 57.5 3.4 33 263-296 78-110 (188)
495 COG5072 ALK1 Serine/threonine 95.6 0.06 1.3E-06 56.2 9.1 81 205-291 286-369 (488)
496 PF04655 APH_6_hur: Aminoglyco 95.5 0.044 9.5E-07 55.0 7.8 31 108-139 8-38 (253)
497 KOG0606 Microtubule-associated 95.5 0.0028 6.1E-08 73.1 -0.8 129 215-345 875-1031(1205)
498 cd05610 STKc_MASTL Catalytic d 95.5 0.0067 1.5E-07 69.5 2.2 77 265-345 499-576 (669)
499 PTZ00384 choline kinase; Provi 95.5 0.2 4.4E-06 53.4 13.1 30 262-292 227-256 (383)
500 PTZ00296 choline kinase; Provi 95.1 0.48 1.1E-05 51.5 14.9 73 68-141 70-152 (442)
No 1
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=100.00 E-value=7.4e-84 Score=694.97 Aligned_cols=416 Identities=43% Similarity=0.674 Sum_probs=398.5
Q ss_pred CCcchHHHHHHHHHHhcChHHHHHHHHHhcCCCCCCHHHHHHHHhhhcCCCCCChHHHHHHHHHHhCCChHhhhcccCcc
Q 008643 29 EVVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQ 108 (558)
Q Consensus 29 ~~~~~~a~~l~~~l~~lGp~~iKlGQ~lstr~dllp~~~~~eL~~Lqd~~pp~~~~~~~~~ie~elg~~~~~~f~~~~~~ 108 (558)
....+++++|+.+|++|||+|||+||+||||||++|++|++||++|||++||+|++.++++|++++|.+++++|++|+++
T Consensus 52 ~~~~~~~~rL~~~L~~LGPtfIK~GQ~LStR~Dl~p~e~~~eL~~LQD~vpp~~~~~~~~iie~eLG~~iee~F~eF~~~ 131 (517)
T COG0661 52 ELREKRAERLRLALEELGPTFIKLGQILSTRPDLVPPEYAEELAKLQDRVPPFPFEEAERIIEEELGRPIEELFSEFEPE 131 (517)
T ss_pred HHhHhHHHHHHHHHHHhCCchhhhhhHHhcCccccCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCCHHHHHHHcCCC
Confidence 34456799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHHH
Q 008643 109 TIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYTL 188 (558)
Q Consensus 109 pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~~ 188 (558)
|||+||+||||+|++ ++|++||||||||++.+.+..|+.+|+.++.+++++.+..+++++..+++||.+++..|+||++
T Consensus 132 PiAsASIaQVH~A~L-~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 132 PIASASIAQVHRAVL-KSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred chhhhhHhhheeEEe-cCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 999999999999999 6899999999999999999999999999999999999888899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHCCceecC
Q 008643 189 EARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGLFHGD 268 (558)
Q Consensus 189 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi~H~D 268 (558)
||.|+++|+++|++++.++||+|||+||+++||||||++|.++++...+++.|.|...+...++.++++|+..+||||+|
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f~~q~~~dgffHaD 290 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAFLRQLLRDGFFHAD 290 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHHHHHHHhcCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHhhcC
Q 008643 269 PHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNSSG 348 (558)
Q Consensus 269 lhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~~~~ 348 (558)
||||||+++.+|++.++|||++++++++.|..+.+.+.++.++|+..++.....+|++++.+|...+..++..++..+.+
T Consensus 291 pHpGNi~v~~~g~i~~lDfGi~g~l~~~~r~~l~~~~~a~~~rD~~~v~~~~~~~G~~~~~~~~~~~~~~i~~~~~~~~~ 370 (517)
T COG0661 291 PHPGNILVRSDGRIVLLDFGIVGRLDPKFRRYLAELLLAFLNRDYDRVAELHVELGYVPPDTDRDPLAAAIRAVLEPIYG 370 (517)
T ss_pred CCccceEEecCCcEEEEcCcceecCCHHHHHHHHHHHHHHHhhCHHHHHHHHHHhCCCCCccchHHHHHHHHHHHHhhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCChhHhhhHHHHHHhhcCCCHHHHHHHHHH
Q 008643 349 KGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKFLEVAYPYVAKRLLTDPNPALRERLIQV 428 (558)
Q Consensus 349 ~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~~~~~a~p~v~~~ll~~~~p~~r~~l~~~ 428 (558)
.++..++++.+.+.+.++++++++++|+++.++.|+++++||+|+.+||+++++..|.||+.++..+..+|. +...
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~r~p~~l~ll~r~~~~vEg~~~~ldp~~~~~~~a~p~~~~~~~~~~~~~----~~~~ 446 (517)
T COG0661 371 KPLEEISFGEILDKLFEVARRFPMRLPPELVLLQRTLLLVEGVGRQLDPRFNLWAVAQPLLAKWLKKQLSPK----LLRE 446 (517)
T ss_pred CChhhccHHHHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHHHHHhhCccccHHHHhhHHHHHHHHHhhhHH----HHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999988 4455
Q ss_pred HhcccccchHHHHHHHHHHHh
Q 008643 429 LFKDNVFQWKRLENLITLAKE 449 (558)
Q Consensus 429 l~~~~~~~~~rl~~l~~~a~~ 449 (558)
+.++....|+++..+.+.+++
T Consensus 447 l~~~~~~~~~~~~~l~~~~~~ 467 (517)
T COG0661 447 LKDEAVAVLNALPLLPRLLRD 467 (517)
T ss_pred HHHhHHHHHHHHHhhHHHHHH
Confidence 555556667777777776665
No 2
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=100.00 E-value=6.2e-80 Score=669.09 Aligned_cols=419 Identities=31% Similarity=0.479 Sum_probs=395.2
Q ss_pred chHHHHHHHHHHHHHHHHHHhh-hC------C-------CCCCcchHHHHHHHHHHhcChHHHHHHHHHhcCCCCCCHHH
Q 008643 2 SRGVEIVWSLGLYWSNLTYDCL-VG------R-------DKEVVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDY 67 (558)
Q Consensus 2 ~r~~~i~~~~~~~~~~~~~~~~-~~------~-------~~~~~~~~a~~l~~~l~~lGp~~iKlGQ~lstr~dllp~~~ 67 (558)
.|+.+|++++..|++..++++. .. . .+.....+|+++|.+|++|||+|||+||+||||||++|++|
T Consensus 5 ~R~~~I~~v~~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rlr~aLe~LGp~fIKlGQ~LStR~DllP~~~ 84 (537)
T PRK04750 5 FRLYKIIRVFLRYGLDELILSHRLTRPLRLWRRSLFWMPNRHKDKPRGERLRLALEELGPIFVKFGQMLSTRRDLFPPDI 84 (537)
T ss_pred HHHHHHHHHHHHhChHHHhhhccccchhhhhhhhhhhhhcccccccHHHHHHHHHHHcCcHHHHHHHHHHcCcccCCHHH
Confidence 6899999999999987766542 10 0 11223467999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCCChHHHHHHHHHHhCCChHhhhcccCcceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHH
Q 008643 68 MNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDL 147 (558)
Q Consensus 68 ~~eL~~Lqd~~pp~~~~~~~~~ie~elg~~~~~~f~~~~~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl 147 (558)
++||++|||++||+|++.++++|++++|.+++++|++|+++|||+||+||||+|+++.+|+.|||||+||++.+.+..|+
T Consensus 85 ~~eL~~Lqd~vpp~~~~~~~~~ie~elG~~~~~~F~~fd~~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl 164 (537)
T PRK04750 85 ADELALLQDRVPPFDGALARAIIEKALGGPVEEWFDDFDIKPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADL 164 (537)
T ss_pred HHHHHHHHcCCCCCCHHHHHHHHHHHhCCCHHHHHHhcChhhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999656999999999999999999999
Q ss_pred HHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeC
Q 008643 148 FLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWID 227 (558)
Q Consensus 148 ~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~ 227 (558)
.+|+.++.+++++.+....+++..+++||.+.+.+|+||.+|++|+.+|+++|.+.+.++||++||+||+++|||||||+
T Consensus 165 ~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~ 244 (537)
T PRK04750 165 ALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMY 244 (537)
T ss_pred HHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeec
Confidence 99999999999988877888999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEecCC----CeEEeecCcccccChhhHHHHHH
Q 008643 228 GIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDG----RIAYVDFGNVAELSQQNKQILID 303 (558)
Q Consensus 228 G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg----~l~liDFGl~~~l~~~~~~~l~~ 303 (558)
|+++++...+.+.+.+...+...++..++.|++.+||||+|||||||+++.+| +++++|||+++.++++.+..+.+
T Consensus 245 G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~~r~~l~~ 324 (537)
T PRK04750 245 GIPVSDVAALRAAGTDMKLLAERGVEVFFTQVFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKEDKRYLAE 324 (537)
T ss_pred CccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHHHHHHHHH
Confidence 99999887777778888888888999999999999999999999999999988 99999999999999999999999
Q ss_pred HHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHH
Q 008643 304 AVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIR 383 (558)
Q Consensus 304 ~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~r 383 (558)
.+.+++++|+..++..+.++|..++.+|+..+..++..++..+.+.++.+++++.+..++.++++++++++|++++++.|
T Consensus 325 ~~~a~~~~D~~~v~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~l~~i~~~~~l~~l~~~~r~~~~~ip~~l~ll~k 404 (537)
T PRK04750 325 NFLAFFNRDYRRVAELHVESGWVPPDTRVEELEFAIRAVCEPIFDKPLAEISFGHVLLRLFNTARRFNVEIQPQLVLLQK 404 (537)
T ss_pred HHHHHHhcCHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHCCCcccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhcCCCCChhHhhhHHHHHHhhcCCCHH
Q 008643 384 SLLTQEGICFTLKPDFKFLEVAYPYVAKRLLTDPNPA 420 (558)
Q Consensus 384 sl~~legi~~~LdP~~~~~~~a~p~v~~~ll~~~~p~ 420 (558)
+++++||++++|||++++++.|+||+.+++.+..+|.
T Consensus 405 tl~~lEG~~r~LdP~~d~~~~a~p~l~~~~~~~~~~~ 441 (537)
T PRK04750 405 TLLNVEGLGRQLDPQLDLWKTAKPFLERWMKEQVGPR 441 (537)
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhcChH
Confidence 9999999999999999999999999999998888764
No 3
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=100.00 E-value=2.1e-76 Score=634.59 Aligned_cols=419 Identities=36% Similarity=0.557 Sum_probs=389.4
Q ss_pred CchHHHHHHHHHHHHHHHHHHhhhC---------------CCCCCcchHHHHHHHHHHhcChHHHHHHHHHhcCCCCCCH
Q 008643 1 MSRGVEIVWSLGLYWSNLTYDCLVG---------------RDKEVVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVRE 65 (558)
Q Consensus 1 ~~r~~~i~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~a~~l~~~l~~lGp~~iKlGQ~lstr~dllp~ 65 (558)
+.|+.+|+.++..|+++.+.++..+ ..+....++|+++|..|++|||+|||+||+||||||++|+
T Consensus 1 ~~R~~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lGp~fiKlGQ~lS~r~dllp~ 80 (437)
T TIGR01982 1 LRRLRRIIRVLIRYGFLALVESPIGPLSLRLLRRLLLPFSNRENRLMSRGERLRLALEELGPTFIKFGQTLSTRADLLPA 80 (437)
T ss_pred CHHHHHHHHHHHHhCcHHHhhhhcccchhhhHhhhhhhhcccccccccHHHHHHHHHHHcCchhHHHhHHHHhCcccCCH
Confidence 4799999999999998877665211 1122345679999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCCCCChHHHHHHHHHHhCCChHhhhcccCcceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHH
Q 008643 66 DYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYR 145 (558)
Q Consensus 66 ~~~~eL~~Lqd~~pp~~~~~~~~~ie~elg~~~~~~f~~~~~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~ 145 (558)
+|+++|++|||++||+|++.+++++++++|.+++++|.+|+++|||+||+||||+|++ ++|+.|||||+||++.+.+..
T Consensus 81 ~~~~~L~~Lqd~v~p~~~~~~~~~l~~elg~~~~~~F~~fd~~plasaSigQVh~A~l-~~G~~VaVKv~rp~i~~~i~~ 159 (437)
T TIGR01982 81 DIAEELSLLQDRVPPFDFKVARKVIEAALGGPLEELFAEFEEKPLAAASIAQVHRARL-VDGKEVAVKVLRPGIEKTIAA 159 (437)
T ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHhCcCHHHHHhhCCCcceeeeehhheEEEEe-cCCCEEEEEeeCCCcHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999 699999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEee
Q 008643 146 DLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEW 225 (558)
Q Consensus 146 Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~ 225 (558)
|+.+++.++.+++++.+.....++..+++||...+.+|+||.+|++|+.+|++.+++++.+++|++|+++|+..+|||||
T Consensus 160 Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~ 239 (437)
T TIGR01982 160 DIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEW 239 (437)
T ss_pred HHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEe
Confidence 99999999999998877777789999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHH
Q 008643 226 IDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAV 305 (558)
Q Consensus 226 i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~ 305 (558)
++|+++.+.......+.+...+....+..++.++|.+|++|+|||||||+++++|+++++|||+++.+++..+..+.+++
T Consensus 240 i~G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~~~r~~l~~l~ 319 (437)
T TIGR01982 240 IDGIPLSDIAALDEAGLDRKALAENLARSFLNQVLRDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSEEDRRYLAEIL 319 (437)
T ss_pred ECCcccccHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCceeCCCCcccEEECCCCcEEEEeCCCeeECCHHHHHHHHHHH
Confidence 99999999866555566655555555667899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHH
Q 008643 306 VHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSL 385 (558)
Q Consensus 306 ~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl 385 (558)
.++..+|+..++..+..+|+.++.+|...+...+..++..+.+.+..++++..+..++.++++++++++|+++..+.|++
T Consensus 320 ~a~~~~D~~~l~~~l~~~g~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~r~l 399 (437)
T TIGR01982 320 YGFLNRDYRRVAEVHFDAGYVPSDTDMAEFEQAIRAIGEPIFGQPLKEISVGRLLAGLFKITRDFNMELQPQLLLLQKTL 399 (437)
T ss_pred HHHHhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhCCChhhCCHHHHHHHHHHHHHHCCccCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988888889999999999999999999999999999999999
Q ss_pred HHHHhhhhhcCCCCChhHhhhHHHHHHhhcCCCHH
Q 008643 386 LTQEGICFTLKPDFKFLEVAYPYVAKRLLTDPNPA 420 (558)
Q Consensus 386 ~~legi~~~LdP~~~~~~~a~p~v~~~ll~~~~p~ 420 (558)
+++||+++.|||++++++.++||+.+.+.+..+|+
T Consensus 400 ~~leg~~~~L~p~~~~~~~~~p~~~~~~~~~~~~~ 434 (437)
T TIGR01982 400 LTVEGVGRQLDPDLNMWKVAEPFVKRWIRKRLGPK 434 (437)
T ss_pred HHHHHHHHHhCCCCCHHHHHHHHHHHHHHhhcChh
Confidence 99999999999999999999999999888877764
No 4
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-63 Score=535.90 Aligned_cols=289 Identities=43% Similarity=0.638 Sum_probs=275.5
Q ss_pred HHHHHHHHHhcChHHHHHHHHHhcCCCCCCHHHHHHHHhhhcCCCCCChHHHHHHHHHHhCCChHhhhcccCcceeeeee
Q 008643 35 ARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAAS 114 (558)
Q Consensus 35 a~~l~~~l~~lGp~~iKlGQ~lstr~dllp~~~~~eL~~Lqd~~pp~~~~~~~~~ie~elg~~~~~~f~~~~~~pIg~Gs 114 (558)
|++|+++++.+||+|||+||.+|||||++|+||.++|+.|||++||+|++++.+++|+|+|.+++++|++|+++|||+||
T Consensus 94 a~~L~e~~~~nGg~yIKlGQ~lst~~dllP~Eyv~~L~~LqD~~Pp~~~ee~~~i~e~ElG~~ie~if~~f~~~piaaAS 173 (538)
T KOG1235|consen 94 AERLLELFLRNGGTYIKLGQHLSTRPDLLPKEYVKTLSELQDQAPPFPWEEAFKIFEEELGAPIEDIFSEFDEEPIAAAS 173 (538)
T ss_pred HHHHHHHHHHcCCeEEEechhhccccccCcHHHHHHHHHHhccCCCCCHHHHHHHHHHHhCCCHHHHHHhcCcchhhhcc
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHHHHHHHHH
Q 008643 115 LGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYTLEARNME 194 (558)
Q Consensus 115 ~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~~Ea~n~~ 194 (558)
+||||+|++ ++|+.||||||||++++.+..|+.+++.++.+++++.+. +++.+++||+++++.+|+||.+||+|++
T Consensus 174 laQVhrA~L-~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~---~~~~~lvdE~~~~L~~ELDF~~EA~Nae 249 (538)
T KOG1235|consen 174 LAQVHRARL-KNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPD---FDLVWLVDEIAKSLPQELDFTKEAKNAE 249 (538)
T ss_pred hhheEEEEe-cCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcC---CchhhHHHHHHhhhHhhcchHHHHHhHH
Confidence 999999999 579999999999999999999999999999999988654 5699999999999999999999999999
Q ss_pred HHHHhcCCCC---CeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHCCceecCCCC
Q 008643 195 DFLENFKDDP---TVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGLFHGDPHP 271 (558)
Q Consensus 195 ~~~~~~~~~~---~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi~H~DlhP 271 (558)
+|+++|++.+ .|.||+|||++|+++|||||||+|.+++|...+.+.|+++..+....+..+.+||+.+||||+||||
T Consensus 250 ~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~~~qIf~~GffHaDPHP 329 (538)
T KOG1235|consen 250 RFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEAYLEQIFKTGFFHADPHP 329 (538)
T ss_pred HHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHHHHHHHHhcCCccCCCCC
Confidence 9999999998 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEec----CCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCC
Q 008643 272 GNIFAMR----DGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLA 327 (558)
Q Consensus 272 gNIlv~~----dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~ 327 (558)
|||++++ ++++.+.|||+++.++...|..++++..++...|...|.+..-.+|...
T Consensus 330 GNilv~~~~~~~~~ivllDhGl~~~is~~~r~~~~~~~~a~~~~d~~~~~~~~~~~g~~~ 389 (538)
T KOG1235|consen 330 GNILVRPNPEGDEEIVLLDHGLYAVISHKTRKDYAELWLALVFEDEKAMQALAEQLGLGL 389 (538)
T ss_pred CcEEEecCCCCCccEEEEcccccccccHHHHHHHHHHHHHHhcccHHHHHHHHHHhcccc
Confidence 9999994 5789999999999999999999999999999977777777776666654
No 5
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=100.00 E-value=2.6e-47 Score=386.53 Aligned_cols=375 Identities=25% Similarity=0.340 Sum_probs=325.1
Q ss_pred HHHHHHHHHHhcChHHHHHHHHHhcCCCCCCHHHHHHHHhhhcCCCCCChHHHHHHHHHHhCC-ChHhhhcccCcceeee
Q 008643 34 RARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGR-PLEAVFSKISSQTIAA 112 (558)
Q Consensus 34 ~a~~l~~~l~~lGp~~iKlGQ~lstr~dllp~~~~~eL~~Lqd~~pp~~~~~~~~~ie~elg~-~~~~~f~~~~~~pIg~ 112 (558)
.-+-|+..++..||+|||+|||.|||+|++++++|.+|++|+.+++|.++....+.++.++|. .++++|.+|++.|||+
T Consensus 120 W~~~L~kaLE~aGPtFIKLGQWAsTR~DlFs~afC~qLSKLHs~vt~Hs~a~T~k~l~qa~~~~~~~eiF~efn~~PIGs 199 (565)
T KOG1236|consen 120 WLRLLLKALETAGPTFIKLGQWASTRRDLFSKAFCAQLSKLHSNVTPHSFAFTKKKLRQAFGVKKIEEIFSEFNREPIGS 199 (565)
T ss_pred HHHHHHHHHHhcCCceEEecccccccccccCHHHHHHHHHHhccCCCCchHHHHHHHHHHHCcCcHHHHHHhcCCccccc
Confidence 456788999999999999999999999999999999999999999999999999999999998 9999999999999999
Q ss_pred eeccEEEEEEEc---------------CCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHH
Q 008643 113 ASLGQVYRATLR---------------ETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFG 177 (558)
Q Consensus 113 Gs~GqVy~a~~~---------------~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~ 177 (558)
|+++|||+|+.+ .+.+.|||||.+|++++++++|+.||+..+...+..+. -.-.++...++.|.
T Consensus 200 G~IAQVY~atl~~a~lekd~~~~~~~~~~tq~~AiKv~Hp~V~~~ir~Dl~Il~f~Akl~~~vP~-l~wL~l~~~vkqF~ 278 (565)
T KOG1236|consen 200 GCIAQVYRATLKTAYLEKDSGKEYVQKLGTQSCAIKVLHPNVEKQIRLDLGILGFGAKLINNVPD-LSWLSLPLEVKQFS 278 (565)
T ss_pred chhhhhhhhhhhHHHhhcccchhhhcCCccceeeeeccCccHHHHHHHHHHHHhhhhhhhhhcCc-cccccCcchHHHHH
Confidence 999999999763 23468999999999999999999999999988885433 23356778899999
Q ss_pred HhhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCH-HHHHHHHHHHHH
Q 008643 178 EKLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDV-GGFLTVGVSAAL 256 (558)
Q Consensus 178 ~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~-~~~~~~~v~~~L 256 (558)
-.+...+|.++||.|+.+|..+|.....|.+|.++..++++.+|+-+|.+|.++.....-.+..... +++...++..-+
T Consensus 279 v~ln~QvdL~~EA~hL~rF~~NF~~s~~V~fP~P~~~~~~~~vl~E~~~~Gl~v~~~v~~~~~pe~l~kkva~lg~~All 358 (565)
T KOG1236|consen 279 VGLNAQVDLRQEALHLPRFTNNFSGSKKVLFPKPIAPLHTDLVLVETYERGLSVLRFVKWKSQPEALVKKVAKLGVNALL 358 (565)
T ss_pred HHHHhhcchhhhhhhhHHHHHhcccceeecCCcccccccccceeeeeccccccHHhhhhcccChHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999887654433322212 234455677778
Q ss_pred HHHHHCCceecCCCCCCEEEecC-------------------------------------------CCeEEeecCccccc
Q 008643 257 RQLLEFGLFHGDPHPGNIFAMRD-------------------------------------------GRIAYVDFGNVAEL 293 (558)
Q Consensus 257 ~~Lh~~Gi~H~DlhPgNIlv~~d-------------------------------------------g~l~liDFGl~~~l 293 (558)
+++.-++|+|+|+|||||++..+ .+++++|=|++..+
T Consensus 359 kMl~vDNFvHaDlHPGNVlirf~~t~~~~~~~~~~e~~~~i~~~L~~~~~e~~d~~~~~~~~~~~~P~lvflDtGiv~kL 438 (565)
T KOG1236|consen 359 KMLIVDNFVHADLHPGNVLIRFNKTEDNLRGVHKAEKASAIKRGLEWFRSEVRDARFTDSPDLEYEPTLVFLDTGIVTKL 438 (565)
T ss_pred HHHHhhcceecccCCCcEEEEecCCCccccccccchhhhHHhhhhhhhhhhhhhhhhhccccccCCCeEEEecchhhhcc
Confidence 88899999999999999999532 25899999999999
Q ss_pred ChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHhhc-CCCCCCCCHHHHHHHHHHHHHhcCC
Q 008643 294 SQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNSS-GKGLADFNFRSVTGQFNKLVYNYRI 372 (558)
Q Consensus 294 ~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~ 372 (558)
+...+.++...+-+....|......-++...-.....|...|...+++++.... ..++...+.++++++++.+++++.+
T Consensus 439 s~qn~~N~l~lF~av~~~~Gy~ag~lml~~Sr~q~~~d~e~F~~kvEklv~~~~st~sl~tl~i~~ll~em~tmvreH~V 518 (565)
T KOG1236|consen 439 SHQNQMNLLSLFRAVARFDGYDAGELMLERSRQQQCIDPERFARKVEKLVLKARSTKSLRTLNIGDLLSEMFTMVREHHV 518 (565)
T ss_pred ChhhHHHHHHHHHHHHHhcchhHHHHHHhhcccccCCCHHHHHHHHHHHHHHhhhhcccCcCcHHHHHHHHHHHHHHhhe
Confidence 999999999988887777666666666665555556788888888888887654 5677788999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHhhhhhcCCCCChhHhhhHHH
Q 008643 373 RIPERFSLVIRSLLTQEGICFTLKPDFKFLEVAYPYV 409 (558)
Q Consensus 373 ~lP~~~~~~~rsl~~legi~~~LdP~~~~~~~a~p~v 409 (558)
++..+|+.++-+.+.+||..++|||++++.....+|+
T Consensus 519 ~ids~f~tvvlsilvlEG~gRqLdP~lDl~~~~~~~l 555 (565)
T KOG1236|consen 519 RIDSNFTTVVLSILVLEGFGRQLDPDLDLFQLRTFLL 555 (565)
T ss_pred eeccchHHHHHHHHHHhhhccccCCCcchhhhHHHHH
Confidence 9999999999999999999999999999998554444
No 6
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=99.98 E-value=4.6e-33 Score=280.04 Aligned_cols=250 Identities=20% Similarity=0.231 Sum_probs=193.9
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCC----hhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhh
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGI----EPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEE 183 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~----~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~E 183 (558)
..||+|+-|.||+++++.||+.+|+|+++-+. .+++.+|+.+++..
T Consensus 85 ~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~------------------------------ 134 (364)
T KOG0581|consen 85 GVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSC------------------------------ 134 (364)
T ss_pred hhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhC------------------------------
Confidence 67999999999999999999999999985443 33444444443332
Q ss_pred hcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHh-cCCCCHHHHHHHHHHHHHHHHHH-
Q 008643 184 LDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIK-GAGIDVGGFLTVGVSAALRQLLE- 261 (558)
Q Consensus 184 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~-~~~~~~~~~~~~~v~~~L~~Lh~- 261 (558)
.+++++.|++.|.++.. ...++||||+||+|.++.... ...+..-..+..+|+.||.|||+
T Consensus 135 -----~spyIV~~ygaF~~~~~------------~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~ 197 (364)
T KOG0581|consen 135 -----QSPYIVGFYGAFYSNGE------------EISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEE 197 (364)
T ss_pred -----CCCCeeeEeEEEEeCCc------------eEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 25777788877776653 138999999999998864321 12333445688899999999995
Q ss_pred CCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHH
Q 008643 262 FGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEA 341 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~ 341 (558)
++|+|||+||.|||++..|++||+|||.++.+... +...+.|+..||+||-+..+.++...|+|++|..+.+
T Consensus 198 ~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS--------~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE 269 (364)
T KOG0581|consen 198 RKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS--------IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLE 269 (364)
T ss_pred cCeeeccCCHHHeeeccCCCEEeccccccHHhhhh--------hcccccccccccChhhhcCCcCCcccceecccHHHHH
Confidence 99999999999999999999999999999987664 2344568999999999999999999999999999999
Q ss_pred HHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchh-HHHHHHHHHHHHhhhhhcCCCCChhHh---hhHHHHHHhhc
Q 008643 342 IWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPER-FSLVIRSLLTQEGICFTLKPDFKFLEV---AYPYVAKRLLT 415 (558)
Q Consensus 342 l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~-~~~~~rsl~~legi~~~LdP~~~~~~~---a~p~v~~~ll~ 415 (558)
+..+.++-+...-+...+.+.+..++.+.|.++|.. |+.-+++++.. |++-||.-+.... ..||+.+....
T Consensus 270 ~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~---CL~Kdp~~R~s~~qLl~Hpfi~~~~~~ 344 (364)
T KOG0581|consen 270 LAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSC---CLRKDPSERPSAKQLLQHPFIKKFEDP 344 (364)
T ss_pred HhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHH---HhcCCcccCCCHHHHhcCHHHhhcccc
Confidence 988755444332223345666777888899999997 99999999987 9999998775443 56666654443
No 7
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97 E-value=2.3e-31 Score=269.95 Aligned_cols=198 Identities=21% Similarity=0.247 Sum_probs=156.4
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCC-----ChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPG-----IEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLL 181 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~-----~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~ 181 (558)
.+.||+||||.||+|+++.+|..||||.+... ..+.+..|+. ++
T Consensus 15 ~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~-------------------------------iL 63 (429)
T KOG0595|consen 15 SREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIK-------------------------------IL 63 (429)
T ss_pred hhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHH-------------------------------HH
Confidence 44599999999999999999999999977543 1222223332 33
Q ss_pred hhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHh-cCCCCHHHHHHHHHHHHHHHHH
Q 008643 182 EELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIK-GAGIDVGGFLTVGVSAALRQLL 260 (558)
Q Consensus 182 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~-~~~~~~~~~~~~~v~~~L~~Lh 260 (558)
.|++ |+|++++.+...++..+ |||||||+||+|.++...+ ....+..+.+..|+..|+++||
T Consensus 64 kel~----H~nIV~l~d~~~~~~~i-------------~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~ 126 (429)
T KOG0595|consen 64 KELK----HPNIVRLLDCIEDDDFI-------------YLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLH 126 (429)
T ss_pred HhcC----CcceeeEEEEEecCCeE-------------EEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3443 78888887777776655 9999999999999986554 3345566778999999999999
Q ss_pred HCCceecCCCCCCEEEecC------CCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCccc
Q 008643 261 EFGLFHGDPHPGNIFAMRD------GRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSP 334 (558)
Q Consensus 261 ~~Gi~H~DlhPgNIlv~~d------g~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~ 334 (558)
+++|+|||+||.|||++.+ -.+||.|||+++.+.+.. ..+.++|++-|||||++..+.++.++|+|+
T Consensus 127 ~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~-------~a~tlcGSplYMAPEV~~~~~YdAKADLWS 199 (429)
T KOG0595|consen 127 ENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGS-------MAETLCGSPLYMAPEVIMSQQYDAKADLWS 199 (429)
T ss_pred HCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchh-------HHHHhhCCccccCHHHHHhccccchhhHHH
Confidence 9999999999999999875 358999999999998543 346789999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 008643 335 IIPALEAIWQNSSGKGLADFNFRSVTG 361 (558)
Q Consensus 335 l~~~l~~l~~~~~~~~~~~~~~~~l~~ 361 (558)
+|..+++++.+.. ++..-+..++..
T Consensus 200 iG~Ilyq~l~g~~--Pf~a~t~~eL~~ 224 (429)
T KOG0595|consen 200 IGTILYQCLTGKP--PFDAETPKELLL 224 (429)
T ss_pred HHHHHHHHHhCCC--CccccCHHHHHH
Confidence 9999999998432 333334444443
No 8
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=3.9e-31 Score=279.90 Aligned_cols=247 Identities=19% Similarity=0.266 Sum_probs=196.3
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEec------CCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhh
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQR------PGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKL 180 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~r------p~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l 180 (558)
.+.||+|+|++||+++...+|+.||+||+. ++..+.+..|++|.+.+.
T Consensus 23 g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~-------------------------- 76 (592)
T KOG0575|consen 23 GRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLK-------------------------- 76 (592)
T ss_pred eeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcC--------------------------
Confidence 478999999999999998999999999874 445555666665555543
Q ss_pred HhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC-CCCHHHHHHHHHHHHHHHH
Q 008643 181 LEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA-GIDVGGFLTVGVSAALRQL 259 (558)
Q Consensus 181 ~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~-~~~~~~~~~~~v~~~L~~L 259 (558)
|+|+++|+..|++...| |||.|+|+.++|..+...++. .++..+.+.+||++|+.||
T Consensus 77 ---------HpnIV~f~~~FEDs~nV-------------YivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYL 134 (592)
T KOG0575|consen 77 ---------HPNIVQFYHFFEDSNNV-------------YIVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYL 134 (592)
T ss_pred ---------CCcEEeeeeEeecCCce-------------EEEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHH
Confidence 89999999999998888 999999999999877553222 4566788999999999999
Q ss_pred HHCCceecCCCCCCEEEecCCCeEEeecCcccccChh-hHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHH
Q 008643 260 LEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQ-NKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPA 338 (558)
Q Consensus 260 h~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~-~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~ 338 (558)
|++||+|||+|.||+|++.+-+|||.|||++..+..+ .|. .++||++.|+|||++...-.+.++|+|++|+.
T Consensus 135 H~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk-------~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcv 207 (592)
T KOG0575|consen 135 HSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERK-------KTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCV 207 (592)
T ss_pred HhcCceecccchhheeecCcCcEEecccceeeeecCccccc-------ceecCCCcccChhHhccCCCCCchhhhhhhhH
Confidence 9999999999999999999999999999999999844 443 34689999999999998888899999999999
Q ss_pred HHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCChhHhhhHHHHHHhhcCCC
Q 008643 339 LEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKFLEVAYPYVAKRLLTDPN 418 (558)
Q Consensus 339 l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~~~~~a~p~v~~~ll~~~~ 418 (558)
+|.++. +-.+|.-+.+ .+....+......+|..++.-++.|+.. .++-||.- .
T Consensus 208 mYtLL~-----G~PPFetk~v-kety~~Ik~~~Y~~P~~ls~~A~dLI~~---lL~~~P~~------------------R 260 (592)
T KOG0575|consen 208 MYTLLV-----GRPPFETKTV-KETYNKIKLNEYSMPSHLSAEAKDLIRK---LLRPNPSE------------------R 260 (592)
T ss_pred HHhhhh-----CCCCcccchH-HHHHHHHHhcCcccccccCHHHHHHHHH---HhcCCccc------------------C
Confidence 999986 3345554444 4445566777888999888888888754 44444432 2
Q ss_pred HHHHHHHHHHHhccccc
Q 008643 419 PALRERLIQVLFKDNVF 435 (558)
Q Consensus 419 p~~r~~l~~~l~~~~~~ 435 (558)
|.+.+.|....|+.|.+
T Consensus 261 psl~~vL~h~Ff~~g~~ 277 (592)
T KOG0575|consen 261 PSLDEVLDHPFFKSGFT 277 (592)
T ss_pred CCHHHHhcCHhhhCCCc
Confidence 45555555666665554
No 9
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.97 E-value=8.8e-31 Score=255.74 Aligned_cols=229 Identities=18% Similarity=0.223 Sum_probs=171.7
Q ss_pred cccC-cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhH
Q 008643 103 SKIS-SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLL 181 (558)
Q Consensus 103 ~~~~-~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~ 181 (558)
+.|+ .+.+|.||||.||.++.+.+|.-+|+|++... ++--|+.+.+..+. ++++
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~-------~vVklKQveH~~nE------------------k~vL 98 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQ-------KVVKLKQVEHTHNE------------------KRVL 98 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHH-------HHHHHHHHHHHhhH------------------HHHH
Confidence 3454 57999999999999999999999999997542 22222222211100 0111
Q ss_pred hhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHH-HhcCCCCHHHHHHHHHHHHHHHHH
Q 008643 182 EELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQA-IKGAGIDVGGFLTVGVSAALRQLL 260 (558)
Q Consensus 182 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~-~~~~~~~~~~~~~~~v~~~L~~Lh 260 (558)
+.+. |+.++++...+.+ .+..+|||||++||.|..+.. ..+...+.++++..+|++|++|||
T Consensus 99 ~~v~----~PFlv~l~~t~~d-------------~~~lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH 161 (355)
T KOG0616|consen 99 KAVS----HPFLVKLYGTFKD-------------NSNLYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLH 161 (355)
T ss_pred hhcc----CceeEEEEEeecc-------------CCeEEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH
Confidence 1111 2333333333333 345599999999999987643 234567788999999999999999
Q ss_pred HCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHH
Q 008643 261 EFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALE 340 (558)
Q Consensus 261 ~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~ 340 (558)
..++++||+||+|||++.+|.+|++|||+++.++..+ .++||+++|+||+++...-+...+|.|++|..+|
T Consensus 162 ~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT---------~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIY 232 (355)
T KOG0616|consen 162 SLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRT---------WTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIY 232 (355)
T ss_pred hcCeeeccCChHHeeeccCCcEEEEeccceEEecCcE---------EEecCCccccChHHhhcCCCCcchhHHHHHHHHH
Confidence 9999999999999999999999999999999998763 3568999999999999998999999999999999
Q ss_pred HHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHH
Q 008643 341 AIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQ 388 (558)
Q Consensus 341 ~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~l 388 (558)
+|+.++. |+...+- .++.+.+.+..+++|++|+..+|.|++-
T Consensus 233 EMlaG~p--PF~~~~~----~~iY~KI~~~~v~fP~~fs~~~kdLl~~ 274 (355)
T KOG0616|consen 233 EMLAGYP--PFYDDNP----IQIYEKILEGKVKFPSYFSSDAKDLLKK 274 (355)
T ss_pred HHHcCCC--CCcCCCh----HHHHHHHHhCcccCCcccCHHHHHHHHH
Confidence 9998543 2222222 4455666678999999999998888753
No 10
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=99.96 E-value=2.8e-30 Score=259.89 Aligned_cols=235 Identities=19% Similarity=0.214 Sum_probs=167.0
Q ss_pred cccC-cceeeeeeccEEEEEEEcCCCcEEEEEEecCCCh-hhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhh
Q 008643 103 SKIS-SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIE-PIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKL 180 (558)
Q Consensus 103 ~~~~-~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~-~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l 180 (558)
+.|+ .+.||+||||+||.++.+.+|+-+|+||++.... +. .|.+ .+
T Consensus 25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~--~e~~------------------------------~~ 72 (357)
T KOG0598|consen 25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEK--KEVR------------------------------HT 72 (357)
T ss_pred hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhh--hhHH------------------------------HH
Confidence 3455 5899999999999999999999999999875311 00 0111 11
Q ss_pred HhhhcHH--HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHH-HhcCCCCHHHHHHHHHHHHHH
Q 008643 181 LEELDYT--LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQA-IKGAGIDVGGFLTVGVSAALR 257 (558)
Q Consensus 181 ~~Eld~~--~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~-~~~~~~~~~~~~~~~v~~~L~ 257 (558)
..|.+.. .+|+.++.+...|++ .++.|||+||+.||.|.-... .....++..++|...+++||.
T Consensus 73 ~~Er~IL~~v~hPFiv~l~ysFQt-------------~~kLylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~ 139 (357)
T KOG0598|consen 73 KAERNILSKIKHPFIVKLIYSFQT-------------EEKLYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALG 139 (357)
T ss_pred HHHHHHHHhCCCCcEeeeEEeccc-------------CCeEEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHH
Confidence 1222111 124444444444444 445599999999999965332 223457778999999999999
Q ss_pred HHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHH
Q 008643 258 QLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIP 337 (558)
Q Consensus 258 ~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~ 337 (558)
|||+.||+|||+||+|||++.+|+++|+|||+++..-..... .+.++|+++|||||++....++..+|.|++|.
T Consensus 140 ~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~------t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGi 213 (357)
T KOG0598|consen 140 YLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDA------TRTFCGTPEYMAPEILLGKGYDKAVDWWSLGI 213 (357)
T ss_pred HHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCCCc------cccccCCccccChHHHhcCCCCcccchHhHHH
Confidence 999999999999999999999999999999999854332111 24478999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCC-chhHHHHHHHHHHHHhhhhhcCC
Q 008643 338 ALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRI-PERFSLVIRSLLTQEGICFTLKP 397 (558)
Q Consensus 338 ~l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l-P~~~~~~~rsl~~legi~~~LdP 397 (558)
.+|+|+. +..+|..... .++.+.+.+.+... |..++.-.|+++.- .+.-||
T Consensus 214 llYeML~-----G~pPF~~~~~-~~~~~~I~~~k~~~~p~~ls~~ardll~~---LL~rdp 265 (357)
T KOG0598|consen 214 LLYEMLT-----GKPPFYAEDV-KKMYDKILKGKLPLPPGYLSEEARDLLKK---LLKRDP 265 (357)
T ss_pred HHHHHhh-----CCCCCcCccH-HHHHHHHhcCcCCCCCccCCHHHHHHHHH---HhccCH
Confidence 9999998 3445543333 33344444556443 44477777776643 444455
No 11
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=2.7e-30 Score=261.94 Aligned_cols=186 Identities=20% Similarity=0.243 Sum_probs=143.8
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCCh----------hhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIE----------PIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEF 176 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~----------~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~ 176 (558)
.+.+|+|.||.|-.|..+.||+.||||++..... ..+.+++.+|+.+.
T Consensus 177 ~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~---------------------- 234 (475)
T KOG0615|consen 177 SKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLS---------------------- 234 (475)
T ss_pred eeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcC----------------------
Confidence 6889999999999999999999999999764311 11223333333322
Q ss_pred HHhhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHH
Q 008643 177 GEKLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAA 255 (558)
Q Consensus 177 ~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~ 255 (558)
|||++++++.|.... ..||||||++||.|.+.....+ .+.+..+.++.|++.|
T Consensus 235 -------------HP~IV~~~d~f~~~d-------------s~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~a 288 (475)
T KOG0615|consen 235 -------------HPNIVRIKDFFEVPD-------------SSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTA 288 (475)
T ss_pred -------------CCCEEEEeeeeecCC-------------ceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHH
Confidence 555555555444433 3399999999999988654333 3667778999999999
Q ss_pred HHHHHHCCceecCCCCCCEEEecC---CCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCC---CC
Q 008643 256 LRQLLEFGLFHGDPHPGNIFAMRD---GRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLA---KG 329 (558)
Q Consensus 256 L~~Lh~~Gi~H~DlhPgNIlv~~d---g~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~---~~ 329 (558)
+.|||+.||.|||+||+|||+..+ ..+||.|||+++...... ++.++||++.|+||+++..+-.. ..
T Consensus 289 vkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~s-------fm~TlCGTpsYvAPEVl~~kg~~~~~~k 361 (475)
T KOG0615|consen 289 VKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGS-------FMKTLCGTPSYVAPEVLASKGVEYYPSK 361 (475)
T ss_pred HHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccccce-------ehhhhcCCccccChhheecCCeecccch
Confidence 999999999999999999999876 689999999999876432 34567999999999998865433 35
Q ss_pred CCcccHHHHHHHHHHhhc
Q 008643 330 TDVSPIIPALEAIWQNSS 347 (558)
Q Consensus 330 ~Di~~l~~~l~~l~~~~~ 347 (558)
+|+|++|+.|+-+++++.
T Consensus 362 VDiWSlGcvLfvcLsG~p 379 (475)
T KOG0615|consen 362 VDIWSLGCVLFVCLSGYP 379 (475)
T ss_pred heeeeccceEEEEeccCC
Confidence 799999999999998654
No 12
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=99.96 E-value=8.4e-30 Score=265.93 Aligned_cols=246 Identities=17% Similarity=0.213 Sum_probs=169.5
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||.|||++|++|+.+.+++++||||.... .|+|. +-++|
T Consensus 78 g~~lGeGSYStV~~A~~~~t~keYAiKVl~K~---------~Iike-----------------------------~KvkY 119 (604)
T KOG0592|consen 78 GKILGEGSYSTVVLAREKATGKEYAIKVLDKR---------YIIKE-----------------------------KKVKY 119 (604)
T ss_pred hheeccccceeEEEeeecCCCceeeHhhhhHH---------HHHhh-----------------------------cccch
Confidence 57899999999999999999999999986432 11110 01122
Q ss_pred HHHHHH-HHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHH-HhcCCCCHHHHHHHHHHHHHHHHHHCCc
Q 008643 187 TLEARN-MEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQA-IKGAGIDVGGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 187 ~~Ea~n-~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~-~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi 264 (558)
..--++ +.++ .++|.|.--..........|+|+||+++|.|.++.. .........+++..+|+.+++|||.+||
T Consensus 120 V~~Ek~~l~~L----~~hPgivkLy~TFQD~~sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GI 195 (604)
T KOG0592|consen 120 VTREKEALTQL----SGHPGIVKLYFTFQDEESLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGI 195 (604)
T ss_pred hhHHHHHHHHh----hCCCCeEEEEEEeecccceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCc
Confidence 211111 1111 133333211111222456699999999999987643 2333456678899999999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHH-------HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQI-------LIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIP 337 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~-------l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~ 337 (558)
+|||+||+|||++.||+++|.|||.++.+++..... ....-...+-|+..|++||++..+..++.+|+|+|||
T Consensus 196 IHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGC 275 (604)
T KOG0592|consen 196 IHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGC 275 (604)
T ss_pred eeccCChhheeEcCCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHH
Confidence 999999999999999999999999999998765430 0000012355899999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCChhH
Q 008643 338 ALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKFLE 403 (558)
Q Consensus 338 ~l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~~~~ 403 (558)
+||+|+.+. .|+..-|---+.+.+.++-|.+|-.+|+....+++- .+.+||+-++..
T Consensus 276 ilyQmlaG~--PPFra~NeyliFqkI~~l~y~fp~~fp~~a~dLv~K-------LLv~dp~~Rlt~ 332 (604)
T KOG0592|consen 276 ILYQMLAGQ--PPFRAANEYLIFQKIQALDYEFPEGFPEDARDLIKK-------LLVRDPSDRLTS 332 (604)
T ss_pred HHHHHhcCC--CCCccccHHHHHHHHHHhcccCCCCCCHHHHHHHHH-------HHccCccccccH
Confidence 999999732 244444444566666666666655555544444444 344667665543
No 13
>KOG1234 consensus ABC (ATP binding cassette) 1 protein [General function prediction only]
Probab=99.95 E-value=7.5e-28 Score=233.45 Aligned_cols=330 Identities=24% Similarity=0.326 Sum_probs=263.2
Q ss_pred CCCCCHHHHHHHHhhhcCCCCCChHHHHHHHHHHhCCChHhhhcccCcceeeeeeccEEEEEEEcCCCcEEEEEEecCCC
Q 008643 60 PDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGI 139 (558)
Q Consensus 60 ~dllp~~~~~eL~~Lqd~~pp~~~~~~~~~ie~elg~~~~~~f~~~~~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~ 139 (558)
..++|+...+-+++.++.+..+|..+..+++..++|..|.+.|++|++.|.+++|+||||+|++ .+|.+||||+|.|++
T Consensus 7 ~~ll~p~l~qi~erVrqsAd~MP~~Ql~~vm~~~lG~nW~~Kf~~fd~~P~AaASIGQVHrArl-~~g~eVavKiQYPGv 85 (363)
T KOG1234|consen 7 GSLLPPTLGQILERVRQSADFMPPKQLEPVMWGELGGNWAQKFSSFDDGPFAAASIGQVHRARL-ADGPEVAVKIQYPGV 85 (363)
T ss_pred CCccCHHHHHHHHHhcCccccCChhhhhHHHhhhhchhHHHHHHhhccCccccccHHHHHHHHh-cCCCeeeeecCCCch
Confidence 3578999999999999999999999999999999999999999999999999999999999999 689999999999999
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCce
Q 008643 140 EPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSR 219 (558)
Q Consensus 140 ~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~ 219 (558)
.+.+..|+..+..+..+-.. ...|.-++..++..++.+..|.||.+|+....+|...+++++.++||.|+.++|+.+
T Consensus 86 a~sI~SD~~nl~~lLn~s~l---lPkGLFLd~~i~~ArkEL~~ECDYqrEA~~~~kFr~LLs~~p~f~VP~Vv~Elct~r 162 (363)
T KOG1234|consen 86 ARSIDSDANNLSRLLNFSGL---LPKGLFLDVLIEVARKELKWECDYQREAASALKFRPLLSDDPNFYVPRVVDELCTVR 162 (363)
T ss_pred hhhccCcHHHHHHHHhhccc---ccccccHHHHHHHHHHhcccccchHHHHHHHhhhHHHhcCCCCcchhHHHHhhccch
Confidence 99999999888877654432 235677888899999999999999999999999999999999999999999999999
Q ss_pred EEEEeeeCCCCCCCHHHHhcCCCCHHHHHHH-HHHHHHHHHHHCCceecCCCCCCEEEecC-CCeEEeecCcccccChhh
Q 008643 220 VLVMEWIDGIRCTDPQAIKGAGIDVGGFLTV-GVSAALRQLLEFGLFHGDPHPGNIFAMRD-GRIAYVDFGNVAELSQQN 297 (558)
Q Consensus 220 vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~-~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~d-g~l~liDFGl~~~l~~~~ 297 (558)
+++||++.|.++..... .+.+....+.. .+...|+.+++..|+.-||.-+|+|.+.. .++.++|||.++.+..+.
T Consensus 163 vlt~el~~G~pid~~~~---~sQ~~rn~i~~~~l~lcLrEif~f~fMQTDPNWsNFly~~~tk~i~LlDFGAsr~y~~~F 239 (363)
T KOG1234|consen 163 VLTLELGQGLPIDKTAK---LSQETRNYIGYKLLELCLREIFEFRFMQTDPNWSNFLYNGRTKKIELLDFGASREYGEKF 239 (363)
T ss_pred hhhhhhhcCccchhhhc---ccHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHhccCCCcceEEEEeccccccccHHH
Confidence 99999999999875422 12222333333 35678999999999999999999999753 579999999999999999
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCC-CCcccHH-HHHHHHHHhhcCCCC---CCCCH--HHHHHHHH---HHH
Q 008643 298 KQILIDAVVHAVNEDYAEMANDFTRLGFLAKG-TDVSPII-PALEAIWQNSSGKGL---ADFNF--RSVTGQFN---KLV 367 (558)
Q Consensus 298 ~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~-~Di~~l~-~~l~~l~~~~~~~~~---~~~~~--~~l~~~l~---~~~ 367 (558)
...++..+.+...+|-+.+.+--.++||++.- ++ .+. .-++.++. .+.++ .+++| ++++..+. .+|
T Consensus 240 ~d~Y~~~~~aaa~~dr~~v~e~S~~lgfLtg~Es~--~m~DAHv~sv~i--lgepfa~~~pydF~~q~~t~ri~~lipvm 315 (363)
T KOG1234|consen 240 IDKYIRLLKAAADRDREGVIEMSRELGFLTGYESK--VMEDAHVESVMI--LGEPFASDGPYDFGDQTVTDRIQNLIPVM 315 (363)
T ss_pred HHHHHHHHHHHHhcchHHHHHHHHHhcccccchHH--HHHHHhhhHhhh--ccccccCCCCcCcCccHHHHHHHhhhHHH
Confidence 99999999999999999999999999998742 22 111 11222222 11111 23444 34544444 345
Q ss_pred HhcCCCCch-hHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 368 YNYRIRIPE-RFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 368 ~~~~~~lP~-~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
.++...-|| +...+-|.+...--+|..|...+.
T Consensus 316 L~hRL~pPPeEtYsLHRklsG~fL~cakl~A~v~ 349 (363)
T KOG1234|consen 316 LRHRLCPPPEETYSLHRKLSGAFLLCAKLGATVP 349 (363)
T ss_pred HhccCCCCcHHHHHHHHHhhhHHHHHHHhcCCCc
Confidence 567666554 555566776655555666665543
No 14
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=5.9e-29 Score=261.62 Aligned_cols=228 Identities=23% Similarity=0.298 Sum_probs=167.2
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCC--------ChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPG--------IEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGE 178 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~--------~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~ 178 (558)
.+.||+|+||.|+.|+...+|+.||||+.... ..+.+.+++.+++
T Consensus 22 ~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~--------------------------- 74 (370)
T KOG0583|consen 22 GRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILR--------------------------- 74 (370)
T ss_pred eeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHH---------------------------
Confidence 57899999999999999999999999986543 1122222222222
Q ss_pred hhHhhhcHHHHHHHHHHHHHhcCCCC-CeeeceeeecCCCceEEEEeeeCCCCCCCHHHH-hcCCCCHHHHHHHHHHHHH
Q 008643 179 KLLEELDYTLEARNMEDFLENFKDDP-TVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAI-KGAGIDVGGFLTVGVSAAL 256 (558)
Q Consensus 179 ~l~~Eld~~~Ea~n~~~~~~~~~~~~-~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~-~~~~~~~~~~~~~~v~~~L 256 (558)
.+.+++ .+.+-.++ ...+..++||||+.||.|.+.... ....++..+.++.|+++|+
T Consensus 75 --------------------~~~~HpnI~~l~ev~-~t~~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav 133 (370)
T KOG0583|consen 75 --------------------RLRSHPNIIRLLEVF-ATPTKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAV 133 (370)
T ss_pred --------------------HhccCCCEeEEEEEE-ecCCeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHH
Confidence 222122 22222332 234457999999999999887654 2224456678999999999
Q ss_pred HHHHHCCceecCCCCCCEEEecC-CCeEEeecCcccccC-hhhHHHHHHHHHHHHhcCHHHHHHHHHHc-C-CCCCCCCc
Q 008643 257 RQLLEFGLFHGDPHPGNIFAMRD-GRIAYVDFGNVAELS-QQNKQILIDAVVHAVNEDYAEMANDFTRL-G-FLAKGTDV 332 (558)
Q Consensus 257 ~~Lh~~Gi~H~DlhPgNIlv~~d-g~l~liDFGl~~~l~-~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-g-~~~~~~Di 332 (558)
.|||.+|++|||+||+||+++.+ +++||+|||++.... +.. ..+..+|++.|+|||++.. + +.+..+|+
T Consensus 134 ~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~~-------~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDv 206 (370)
T KOG0583|consen 134 AYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPGEDG-------LLKTFCGSPAYAAPEVLSGKGTYSGKAADV 206 (370)
T ss_pred HHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccCCCCC-------cccCCCCCcccCCHHHhCCCCCcCCchhhh
Confidence 99999999999999999999999 999999999998874 222 2456789999999999987 5 66788999
Q ss_pred ccHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhH-HHHHHHHHHHHhhhhhcCCC
Q 008643 333 SPIIPALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERF-SLVIRSLLTQEGICFTLKPD 398 (558)
Q Consensus 333 ~~l~~~l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~-~~~~rsl~~legi~~~LdP~ 398 (558)
|++|..|+.++.+.. +|+...+.. +...+.+..+.+|.++ +.-.+.++.. ++..||.
T Consensus 207 WS~GViLy~ml~G~~-----PF~d~~~~~-l~~ki~~~~~~~p~~~~S~~~~~Li~~---mL~~~P~ 264 (370)
T KOG0583|consen 207 WSLGVILYVLLCGRL-----PFDDSNVPN-LYRKIRKGEFKIPSYLLSPEARSLIEK---MLVPDPS 264 (370)
T ss_pred hhhHHHHHHHHhCCC-----CCCCccHHH-HHHHHhcCCccCCCCcCCHHHHHHHHH---HcCCCcc
Confidence 999999999998543 333333322 3444778889999998 8777877754 4555553
No 15
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.95 E-value=2.4e-28 Score=255.09 Aligned_cols=244 Identities=19% Similarity=0.265 Sum_probs=188.1
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChh-----hHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHh
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEP-----IIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLE 182 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~-----~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~ 182 (558)
+.||.||||.||+|+.|.|++.||+|++...-+. .+.++++|++.+.
T Consensus 8 e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lk---------------------------- 59 (808)
T KOG0597|consen 8 EMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLK---------------------------- 59 (808)
T ss_pred HHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcC----------------------------
Confidence 5799999999999999999999999987543222 2444444444332
Q ss_pred hhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHh-cCCCCHHHHHHHHHHHHHHHHHH
Q 008643 183 ELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIK-GAGIDVGGFLTVGVSAALRQLLE 261 (558)
Q Consensus 183 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~-~~~~~~~~~~~~~v~~~L~~Lh~ 261 (558)
|+|+..|.+.|.....+ |+|+||+.| +|..+.... +.+++..+.+..++.+||.|||+
T Consensus 60 -------Hpniv~m~esfEt~~~~-------------~vVte~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs 118 (808)
T KOG0597|consen 60 -------HPNIVEMLESFETSAHL-------------WVVTEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHS 118 (808)
T ss_pred -------CcchhhHHHhhcccceE-------------EEEehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 89999999999887666 999999998 777654433 33566667788899999999999
Q ss_pred CCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHH
Q 008643 262 FGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEA 341 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~ 341 (558)
++|.|||+||.||++..+|.+|++|||+++..+..+ .+...+.|++-||||++++.+.++..+|+|++|+.+|+
T Consensus 119 ~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t------~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE 192 (808)
T KOG0597|consen 119 NRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNT------SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYE 192 (808)
T ss_pred cCcccccCCcceeeecCCCceeechhhhhhhcccCc------eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHH
Confidence 999999999999999999999999999999877643 23455789999999999999999999999999999999
Q ss_pred HHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCChh---HhhhHHHHHHhhc
Q 008643 342 IWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKFL---EVAYPYVAKRLLT 415 (558)
Q Consensus 342 l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~~~---~~a~p~v~~~ll~ 415 (558)
++. +-.+| +..-+.++.+.+...|.+.|+..+.-+++++. | .+.-||.-++. -...||++++.-.
T Consensus 193 ~~~-----G~PPF-~a~si~~Lv~~I~~d~v~~p~~~S~~f~nfl~--g-LL~kdP~~RltW~~Ll~HpF~k~~~~~ 260 (808)
T KOG0597|consen 193 LYV-----GQPPF-YARSITQLVKSILKDPVKPPSTASSSFVNFLQ--G-LLIKDPAQRLTWTDLLGHPFWKGKINI 260 (808)
T ss_pred Hhc-----CCCCc-hHHHHHHHHHHHhcCCCCCcccccHHHHHHHH--H-HhhcChhhcccHHHHhcChHHhhhhhh
Confidence 987 33455 33333445566667777777766666666553 2 44568877752 2367888886643
No 16
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.95 E-value=4.6e-28 Score=253.11 Aligned_cols=199 Identities=18% Similarity=0.204 Sum_probs=145.3
Q ss_pred ccC-cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHh
Q 008643 104 KIS-SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLE 182 (558)
Q Consensus 104 ~~~-~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~ 182 (558)
+|+ -++||+|+||+||.|+-+.||+-+|+|+++.. ++.-...+. .+..
T Consensus 142 DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS-------~M~~~~Qv~------------------------hV~a 190 (550)
T KOG0605|consen 142 DFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKS-------EMLKKNQVE------------------------HVRA 190 (550)
T ss_pred cchhheeeccccceeEEEEEEccCCcEEeeecccHH-------HHHhhhhHH------------------------HHHH
Confidence 455 58999999999999999999999999998753 222112221 1122
Q ss_pred hhcHHHH--HHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHh-cCCCCHHHHHHHHHHHHHHHH
Q 008643 183 ELDYTLE--ARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIK-GAGIDVGGFLTVGVSAALRQL 259 (558)
Q Consensus 183 Eld~~~E--a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~-~~~~~~~~~~~~~v~~~L~~L 259 (558)
|-|...| .+.+++++..|++... .||+|||++||++..+.... -...+..++|..+...|+.-+
T Consensus 191 ERdiL~~~ds~~vVKLyYsFQD~~~-------------LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~i 257 (550)
T KOG0605|consen 191 ERDILAEVDSPWVVKLYYSFQDKEY-------------LYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESI 257 (550)
T ss_pred HHHHhhhcCCCcEEEEEEEecCCCe-------------eEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHH
Confidence 2222222 3444555555555444 49999999999997764322 235677889999999999999
Q ss_pred HHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHH-------------------------------HH-----
Q 008643 260 LEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQIL-------------------------------ID----- 303 (558)
Q Consensus 260 h~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l-------------------------------~~----- 303 (558)
|.+|++||||||+|+||+..|++||.|||++.-+....+... .+
T Consensus 258 H~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 337 (550)
T KOG0605|consen 258 HQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTW 337 (550)
T ss_pred HHcCcccccCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHH
Confidence 999999999999999999999999999999865433211110 00
Q ss_pred -----HHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHhh
Q 008643 304 -----AVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNS 346 (558)
Q Consensus 304 -----~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~~ 346 (558)
.+....-|+++||||+++...-++..+|+|++|+++++++.++
T Consensus 338 ~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGy 385 (550)
T KOG0605|consen 338 KRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGY 385 (550)
T ss_pred HhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCC
Confidence 1112256899999999998766888999999999999999854
No 17
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=5.4e-28 Score=258.82 Aligned_cols=231 Identities=17% Similarity=0.150 Sum_probs=172.8
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.+|+||||.|+.|.++.+++.+|||+++.+..=+ ..|++-++.-. ++++ .
T Consensus 373 l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~-~d~Ve~~~~Ek------------------------rI~~---l 424 (694)
T KOG0694|consen 373 LAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQ-RDEVESLMCEK------------------------RIFE---L 424 (694)
T ss_pred EEEeccCcCceEEEEEEcCCCcEEEEEEeeccceec-cccHHHHHHHH------------------------HHHH---H
Confidence 478999999999999999999999999998763100 01111111000 0000 0
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHCCcee
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGLFH 266 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi~H 266 (558)
..+|+.+..++..|+. .+..+.||||+.||++..+.......+...++|...|+.||+|||++||++
T Consensus 425 a~~HPFL~~L~~~fQT-------------~~~l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIY 491 (694)
T KOG0694|consen 425 ANRHPFLVNLFSCFQT-------------KEHLFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIY 491 (694)
T ss_pred hccCCeEeeccccccc-------------CCeEEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCcee
Confidence 1124444444444444 455599999999999876655556667778899999999999999999999
Q ss_pred cCCCCCCEEEecCCCeEEeecCcccccC-hhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHh
Q 008643 267 GDPHPGNIFAMRDGRIAYVDFGNVAELS-QQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 267 ~DlhPgNIlv~~dg~l~liDFGl~~~l~-~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~ 345 (558)
||+|-+|||++.+|++||+||||++..- ...+ .++++|+++||||+++..+.++..+|.|++|+.||+|+.+
T Consensus 492 RDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~~-------TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~G 564 (694)
T KOG0694|consen 492 RDLKLDNLLLDTEGHVKIADFGLCKEGMGQGDR-------TSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVG 564 (694)
T ss_pred eecchhheEEcccCcEEecccccccccCCCCCc-------cccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcC
Confidence 9999999999999999999999998754 2222 3568999999999999999999999999999999999974
Q ss_pred hcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHH
Q 008643 346 SSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLT 387 (558)
Q Consensus 346 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~ 387 (558)
- .|+..-+-.++.+.|...-..||.-++.+...+++.|++
T Consensus 565 q--~PF~gddEee~FdsI~~d~~~yP~~ls~ea~~il~~ll~ 604 (694)
T KOG0694|consen 565 E--SPFPGDDEEEVFDSIVNDEVRYPRFLSKEAIAIMRRLLR 604 (694)
T ss_pred C--CCCCCCCHHHHHHHHhcCCCCCCCcccHHHHHHHHHHhc
Confidence 3 244445556666655544455788888888888888764
No 18
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=2.5e-27 Score=230.08 Aligned_cols=236 Identities=21% Similarity=0.219 Sum_probs=174.6
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||.||||.||++....+|..||.|-+.=+....- -+..+..|++.
T Consensus 24 l~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k--------------------------------~rq~~v~Ei~l 71 (375)
T KOG0591|consen 24 LKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAK--------------------------------ARQDCVKEISL 71 (375)
T ss_pred HHHHcCCcchheEEeeeccCcchhhhhhcchhhccHH--------------------------------HHHHHHHHHHH
Confidence 4689999999999999999999999985442221111 11122233333
Q ss_pred HH--HHHHHHHHHH-hcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHH-hcC--CCCHHH--HHHHHHHHHHHH
Q 008643 187 TL--EARNMEDFLE-NFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAI-KGA--GIDVGG--FLTVGVSAALRQ 258 (558)
Q Consensus 187 ~~--Ea~n~~~~~~-~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~-~~~--~~~~~~--~~~~~v~~~L~~ 258 (558)
.. .|+|+++++. .|..++.+ .+|+||||++|+|+..+.- ++. -++... .+..|++.||..
T Consensus 72 LkQL~HpNIVqYy~~~f~~~~ev------------lnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~ 139 (375)
T KOG0591|consen 72 LKQLNHPNIVQYYAHSFIEDNEV------------LNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYH 139 (375)
T ss_pred HHhcCCchHHHHHHHhhhccchh------------hHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHH
Confidence 22 3999999998 66555542 2799999999999886543 222 233333 367899999999
Q ss_pred HHH--CC--ceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCccc
Q 008643 259 LLE--FG--LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSP 334 (558)
Q Consensus 259 Lh~--~G--i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~ 334 (558)
+|. .. ++|||+||+|||++.+|.+|+.|||+++.++.++. +.|..-|++.||.|+.+....+++.+|+|+
T Consensus 140 cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~t------fA~S~VGTPyYMSPE~i~~~~Y~~kSDiWs 213 (375)
T KOG0591|consen 140 CHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKTT------FAHSLVGTPYYMSPERIHESGYNFKSDIWS 213 (375)
T ss_pred HhccccccceeeccCcchheEEcCCCceeeccchhHhHhcchhH------HHHhhcCCCcccCHHHHhcCCCCcchhHHH
Confidence 998 55 99999999999999999999999999999887643 346667999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCC-CCc-hhHHHHHHHHHHHHhhhhhcCCCCCh
Q 008643 335 IIPALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRI-RIP-ERFSLVIRSLLTQEGICFTLKPDFKF 401 (558)
Q Consensus 335 l~~~l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~lP-~~~~~~~rsl~~legi~~~LdP~~~~ 401 (558)
+|+.+++|..- ..|+..-|+-+ +.+.+.+..+ ++| ..++.-++.++.. |...||+.+.
T Consensus 214 lGCllyEMcaL--~~PF~g~n~~~----L~~KI~qgd~~~~p~~~YS~~l~~li~~---ci~vd~~~RP 273 (375)
T KOG0591|consen 214 LGCLLYEMCAL--QSPFYGDNLLS----LCKKIEQGDYPPLPDEHYSTDLRELINM---CIAVDPEQRP 273 (375)
T ss_pred HHHHHHHHHhc--CCCcccccHHH----HHHHHHcCCCCCCcHHHhhhHHHHHHHH---HccCCcccCC
Confidence 99999999873 33443334444 3444445455 488 7788888888866 7777777664
No 19
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=99.94 E-value=4.2e-27 Score=230.50 Aligned_cols=183 Identities=21% Similarity=0.245 Sum_probs=140.2
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecC-----CChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHh
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRP-----GIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLE 182 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp-----~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~ 182 (558)
-.+|+||||.||+|+++.||+.||||.... .+.+..-++++.|+.+.
T Consensus 8 gkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLk---------------------------- 59 (396)
T KOG0593|consen 8 GKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLK---------------------------- 59 (396)
T ss_pred hccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcc----------------------------
Confidence 368999999999999999999999997642 23333344444444432
Q ss_pred hhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHHHHHHHHHHH
Q 008643 183 ELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVGVSAALRQLL 260 (558)
Q Consensus 183 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~v~~~L~~Lh 260 (558)
|+|++.+.+.|+....+ +||.|||+..-|.+++. ...|.+.. +.+..|++.++.|+|
T Consensus 60 -------H~NLVnLiEVFrrkrkl-------------hLVFE~~dhTvL~eLe~-~p~G~~~~~vk~~l~Q~l~ai~~cH 118 (396)
T KOG0593|consen 60 -------HENLVNLIEVFRRKRKL-------------HLVFEYCDHTVLHELER-YPNGVPSELVKKYLYQLLKAIHFCH 118 (396)
T ss_pred -------cchHHHHHHHHHhccee-------------EEEeeecchHHHHHHHh-ccCCCCHHHHHHHHHHHHHHhhhhh
Confidence 89999999999886555 99999999877766543 33466554 458889999999999
Q ss_pred HCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-CCCCCCCCcccHHHHH
Q 008643 261 EFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-GFLAKGTDVSPIIPAL 339 (558)
Q Consensus 261 ~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-g~~~~~~Di~~l~~~l 339 (558)
.++++|||+||+|||++.+|.+|+||||+++.++.. -+.+++.+.. --|-||+++-. -.+++.+|+|++|+.+
T Consensus 119 k~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p-gd~YTDYVAT-----RWYRaPELLvGDtqYG~pVDiWAiGCv~ 192 (396)
T KOG0593|consen 119 KNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAP-GDNYTDYVAT-----RWYRAPELLVGDTQYGKPVDIWAIGCVF 192 (396)
T ss_pred hcCeecccCChhheEEecCCcEEeccchhhHhhcCC-cchhhhhhhh-----hhccChhhhcccCcCCCcccchhhhHHH
Confidence 999999999999999999999999999999999842 2334444322 12334555443 4677889999999999
Q ss_pred HHHHHh
Q 008643 340 EAIWQN 345 (558)
Q Consensus 340 ~~l~~~ 345 (558)
.+++++
T Consensus 193 aEl~~G 198 (396)
T KOG0593|consen 193 AELLTG 198 (396)
T ss_pred HHHhcC
Confidence 999974
No 20
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=5.9e-27 Score=249.22 Aligned_cols=230 Identities=20% Similarity=0.207 Sum_probs=175.5
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCC------ChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhh
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPG------IEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKL 180 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~------~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l 180 (558)
.+.+|.||-|.|-.|++..||+.+|||++... ....|.+++.||+.+
T Consensus 17 gkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi--------------------------- 69 (786)
T KOG0588|consen 17 GKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLI--------------------------- 69 (786)
T ss_pred cccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHh---------------------------
Confidence 46899999999999999999999999987543 245677788777765
Q ss_pred HhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC-CCCHHHHHHHHHHHHHHHH
Q 008643 181 LEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA-GIDVGGFLTVGVSAALRQL 259 (558)
Q Consensus 181 ~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~-~~~~~~~~~~~v~~~L~~L 259 (558)
||+|+.++++.+.++. ..|+|.||++||.|.++...+.. ....+..++.|+++|+.||
T Consensus 70 --------~HpnVl~LydVwe~~~-------------~lylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yC 128 (786)
T KOG0588|consen 70 --------EHPNVLRLYDVWENKQ-------------HLYLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYC 128 (786)
T ss_pred --------cCCCeeeeeeeeccCc-------------eEEEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHH
Confidence 3777777766655544 44999999999999987543322 2344566889999999999
Q ss_pred HHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCC-CCCCCcccHHHH
Q 008643 260 LEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFL-AKGTDVSPIIPA 338 (558)
Q Consensus 260 h~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~-~~~~Di~~l~~~ 338 (558)
|..+|+|||+||+|+|++..++|||.||||+..-.++. ++...||.+.|.+|+++..-.+ +..+|+|+.|++
T Consensus 129 H~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gk-------lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVI 201 (786)
T KOG0588|consen 129 HAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGK-------LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVI 201 (786)
T ss_pred hhhcceeccCCchhhhhhcccCEeeeccceeecccCCc-------cccccCCCcccCCchhhcCCCCCCCccccchhHHH
Confidence 99999999999999999999999999999997543321 3456789999999999987544 456899999999
Q ss_pred HHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 339 LEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 339 l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
|+.++.+.. ++++-|...++.+ +.+..|.+|..++.-++.|+.- .+.+||+-+
T Consensus 202 LfALLtG~L--PFdDdNir~LLlK----V~~G~f~MPs~Is~eaQdLLr~---ml~VDp~~R 254 (786)
T KOG0588|consen 202 LFALLTGKL--PFDDDNIRVLLLK----VQRGVFEMPSNISSEAQDLLRR---MLDVDPSTR 254 (786)
T ss_pred HHHHHhCCC--CCCCccHHHHHHH----HHcCcccCCCcCCHHHHHHHHH---HhccCcccc
Confidence 999998654 4556666555544 4456677776666666666543 444556444
No 21
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.5e-26 Score=243.50 Aligned_cols=269 Identities=17% Similarity=0.235 Sum_probs=196.2
Q ss_pred HHHHhhhcCCCCCC--hHHHHHHHHHHh-CCChHhhhcccCcceeeeeeccEEEEEEEcCCCcEEEEEEecCC---Chhh
Q 008643 69 NELCILQDDVPSFP--NQVAFNIIEEEL-GRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPG---IEPI 142 (558)
Q Consensus 69 ~eL~~Lqd~~pp~~--~~~~~~~ie~el-g~~~~~~f~~~~~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~---~~~~ 142 (558)
+...++.|+-..++ .++....+..-. ...+...|..+ +.||+|+-|.||.|+...+++.||||.+.-. -.+.
T Consensus 239 ~~~~~~~d~~~~~~~~~~~~~~~l~~v~~~~dP~~~y~~~--~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keL 316 (550)
T KOG0578|consen 239 QHKQQLSDSSAQSIVSKEEILAKLKRVVSQGDPRSKYTDF--KKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKEL 316 (550)
T ss_pred hcccccCchhccccchHHHHHHHhheeccCCChhhhhcch--hhhccccccceeeeeeccCCceEEEEEEEeccCCchhh
Confidence 33444555533333 233333333322 23445556655 6899999999999999999999999976421 1223
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEE
Q 008643 143 IYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLV 222 (558)
Q Consensus 143 i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLv 222 (558)
+-.++.+|+. .+|+|++.|.+.|--. ...|.|
T Consensus 317 ilnEi~Vm~~-----------------------------------~~H~NiVnfl~Sylv~-------------deLWVV 348 (550)
T KOG0578|consen 317 LLNEILVMRD-----------------------------------LHHPNIVNFLDSYLVG-------------DELWVV 348 (550)
T ss_pred hHHHHHHHHh-----------------------------------ccchHHHHHHHHhccc-------------ceeEEE
Confidence 3333333332 2489999999887544 344999
Q ss_pred EeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHH
Q 008643 223 MEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILI 302 (558)
Q Consensus 223 mE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~ 302 (558)
|||++|++|+|+.......+.....++++++.||++||..||+|||||..|||++.+|.+||.|||+|.+++.+...
T Consensus 349 MEym~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~K--- 425 (550)
T KOG0578|consen 349 MEYMEGGSLTDVVTKTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSK--- 425 (550)
T ss_pred EeecCCCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccCc---
Confidence 99999999999865554445555678889999999999999999999999999999999999999999999876521
Q ss_pred HHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhc--CCCCchhHHH
Q 008643 303 DAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNY--RIRIPERFSL 380 (558)
Q Consensus 303 ~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~--~~~lP~~~~~ 380 (558)
-..+-|++.+|||+++....+++++|||++|...-+|+++- .++=...-+..+.-+.... .++.|..++.
T Consensus 426 ---R~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGE-----PPYlnE~PlrAlyLIa~ng~P~lk~~~klS~ 497 (550)
T KOG0578|consen 426 ---RSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGE-----PPYLNENPLRALYLIATNGTPKLKNPEKLSP 497 (550)
T ss_pred ---cccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCC-----CCccCCChHHHHHHHhhcCCCCcCCccccCH
Confidence 12345899999999999999999999999999999998742 2221122234444444443 3567899999
Q ss_pred HHHHHHHHHhhhhhcCCCCCh
Q 008643 381 VIRSLLTQEGICFTLKPDFKF 401 (558)
Q Consensus 381 ~~rsl~~legi~~~LdP~~~~ 401 (558)
.+|.|+.. |+..||+.+-
T Consensus 498 ~~kdFL~~---cL~~dv~~Ra 515 (550)
T KOG0578|consen 498 ELKDFLDR---CLVVDVEQRA 515 (550)
T ss_pred HHHHHHHH---HhhcchhcCC
Confidence 99999988 9999997763
No 22
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.94 E-value=5.3e-27 Score=236.72 Aligned_cols=229 Identities=18% Similarity=0.222 Sum_probs=184.5
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChh------hHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhh
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEP------IIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKL 180 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~------~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l 180 (558)
.+.+|+|.||.|-+|+.+..|+.||||.+|.+..+ .|+++++||..+
T Consensus 58 ~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsL--------------------------- 110 (668)
T KOG0611|consen 58 TETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSL--------------------------- 110 (668)
T ss_pred HHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhc---------------------------
Confidence 36899999999999999899999999988865432 123333333322
Q ss_pred HhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHH
Q 008643 181 LEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQL 259 (558)
Q Consensus 181 ~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~L 259 (558)
.|+|+..+++.|.+...+ +|||||..||.|.|+...+. ......+-+++||.+++.||
T Consensus 111 --------NHPhII~IyEVFENkdKI-------------vivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYC 169 (668)
T KOG0611|consen 111 --------NHPHIIQIYEVFENKDKI-------------VIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYC 169 (668)
T ss_pred --------CCCceeehhhhhcCCceE-------------EEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHH
Confidence 288888888888886655 99999999999999865433 24455677999999999999
Q ss_pred HHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcccHHHH
Q 008643 260 LEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLG-FLAKGTDVSPIIPA 338 (558)
Q Consensus 260 h~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g-~~~~~~Di~~l~~~ 338 (558)
|.++++|||+|.+|||++.++++||.|||++-.+.++. ++.++||.+-|..|+++..- +-.|.+|-|++|..
T Consensus 170 HknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~k-------fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvL 242 (668)
T KOG0611|consen 170 HKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKK-------FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVL 242 (668)
T ss_pred hhccceecccchhheeecCCCCeeeeccchhhhhcccc-------HHHHhcCCcccCCccccCCCCCCCCccchhhHHHH
Confidence 99999999999999999999999999999998776543 34677899999999999864 45688999999999
Q ss_pred HHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 339 LEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 339 l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
||.+.. ...+++.++++.++.++..-.|..| .-|+....+||-++. .||+-+
T Consensus 243 LYtLVy--GtMPFDG~Dhk~lvrQIs~GaYrEP-~~PSdA~gLIRwmLm-------VNP~RR 294 (668)
T KOG0611|consen 243 LYTLVY--GTMPFDGRDHKRLVRQISRGAYREP-ETPSDASGLIRWMLM-------VNPERR 294 (668)
T ss_pred HHHHhh--cccccCCchHHHHHHHhhcccccCC-CCCchHHHHHHHHHh-------cCcccc
Confidence 998874 4568889999999998887776654 567888888888765 567654
No 23
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.94 E-value=9.5e-27 Score=239.59 Aligned_cols=254 Identities=19% Similarity=0.144 Sum_probs=166.9
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|+||.|.+|+...+|+-||||+....-.. +... ..........+.+ ...+|+..
T Consensus 102 ~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~---------~~~~---~~~~~a~~~~~~e--------kv~~EIai 161 (576)
T KOG0585|consen 102 IKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELR---------RQYG---FPRQPAMKLMPIE--------KVRREIAI 161 (576)
T ss_pred hhhhcCCccceEEEEeecCCCcEEEEEeechhhhh---------hhcc---cccccccccCcHH--------HHHHHHHH
Confidence 46799999999999999999999999997532100 0000 0000000001111 12222211
Q ss_pred H--HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHCC
Q 008643 187 T--LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLEFG 263 (558)
Q Consensus 187 ~--~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~~G 263 (558)
. .+|+|++++.+.+.+.. ++..|||+|||..|.+........ .+...++.|.+.+..||+|||.+|
T Consensus 162 lKkl~H~nVV~LiEvLDDP~-----------s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~Qg 230 (576)
T KOG0585|consen 162 LKKLHHPNVVKLIEVLDDPE-----------SDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQG 230 (576)
T ss_pred HHhcCCcCeeEEEEeecCcc-----------cCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcC
Confidence 1 12566666655554432 566799999999998865322222 355667889999999999999999
Q ss_pred ceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCC----CCCCCCcccHHHHH
Q 008643 264 LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGF----LAKGTDVSPIIPAL 339 (558)
Q Consensus 264 i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~----~~~~~Di~~l~~~l 339 (558)
|+||||||.|+|++.+|++||.|||.+...+...-+..-+ .+.-..|++..+||++...|- .+...|+|++|++|
T Consensus 231 iiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~-~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTL 309 (576)
T KOG0585|consen 231 IIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDD-QLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTL 309 (576)
T ss_pred eeccccchhheEEcCCCcEEeeccceeeecccCCccccHH-HHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhH
Confidence 9999999999999999999999999988763321111111 122356999999999987743 44568999999999
Q ss_pred HHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchh--HHHHHHHHHHHHhhhhhcCCCCCh
Q 008643 340 EAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPER--FSLVIRSLLTQEGICFTLKPDFKF 401 (558)
Q Consensus 340 ~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~--~~~~~rsl~~legi~~~LdP~~~~ 401 (558)
|-++-+. -+|.-.. ..++++.+...|+.+|.. .....|.++.- .+.-||+-++
T Consensus 310 YCllfG~-----~PF~~~~-~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~---lL~KdP~~Ri 364 (576)
T KOG0585|consen 310 YCLLFGQ-----LPFFDDF-ELELFDKIVNDPLEFPENPEINEDLKDLIKR---LLEKDPEQRI 364 (576)
T ss_pred HHhhhcc-----CCcccch-HHHHHHHHhcCcccCCCcccccHHHHHHHHH---HhhcChhhee
Confidence 9987532 2343222 344555666778888865 56666666543 4555666554
No 24
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.93 E-value=1.4e-26 Score=240.26 Aligned_cols=198 Identities=23% Similarity=0.243 Sum_probs=148.2
Q ss_pred hCCChHhhhcccCcceeeeeeccEEEEEEEcCCCcEEEEEEec-----CCChhhHHHHHHHHHHHHHHhhhhhhhccCCC
Q 008643 94 LGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQR-----PGIEPIIYRDLFLFRTLASFLNGISIQKLGCN 168 (558)
Q Consensus 94 lg~~~~~~f~~~~~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~r-----p~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~ 168 (558)
++..-.+.|+.+ +.||+|.||+||+|+...+|+.||+|.+| ++......+++.|||.+.
T Consensus 111 w~~r~~~~feki--~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~-------------- 174 (560)
T KOG0600|consen 111 WGPRRADSFEKI--EKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLD-------------- 174 (560)
T ss_pred ccccchHHHHHH--HHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcC--------------
Confidence 344445667666 67999999999999999999999999776 444455667777777653
Q ss_pred hHHHHHHHHHhhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHh--cCCCCHHH
Q 008643 169 AELIVDEFGEKLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIK--GAGIDVGG 246 (558)
Q Consensus 169 ~~~iv~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~--~~~~~~~~ 246 (558)
|+|+.++.+.... ..++..|||.||++. +|.-+.... +...+..+
T Consensus 175 ---------------------HpNIikL~eivt~-----------~~~~siYlVFeYMdh-DL~GLl~~p~vkft~~qIK 221 (560)
T KOG0600|consen 175 ---------------------HPNIIKLEEIVTS-----------KLSGSIYLVFEYMDH-DLSGLLSSPGVKFTEPQIK 221 (560)
T ss_pred ---------------------CCcccceeeEEEe-----------cCCceEEEEEecccc-hhhhhhcCCCcccChHHHH
Confidence 7777766543222 246778999999985 443332211 22345667
Q ss_pred HHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHH-cCC
Q 008643 247 FLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTR-LGF 325 (558)
Q Consensus 247 ~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~-~g~ 325 (558)
.++.|++.||.|||..||+|||||..||||+.+|.+||.|||+++.++......++.-++.+. |-+|+++- .--
T Consensus 222 c~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLW-----YRpPELLLG~t~ 296 (560)
T KOG0600|consen 222 CYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLW-----YRPPELLLGATS 296 (560)
T ss_pred HHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCCcccccceEEee-----ccChHHhcCCcc
Confidence 899999999999999999999999999999999999999999999888776655554444333 33455443 234
Q ss_pred CCCCCCcccHHHHHHHHHHh
Q 008643 326 LAKGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 326 ~~~~~Di~~l~~~l~~l~~~ 345 (558)
+++.+|+|+.||++.+++.+
T Consensus 297 Yg~aVDlWS~GCIl~El~~g 316 (560)
T KOG0600|consen 297 YGTAVDLWSVGCILAELFLG 316 (560)
T ss_pred cccceeehhhhHHHHHHHcC
Confidence 67889999999999999974
No 25
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.93 E-value=2.6e-26 Score=218.77 Aligned_cols=237 Identities=16% Similarity=0.181 Sum_probs=183.3
Q ss_pred cccC-cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhH
Q 008643 103 SKIS-SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLL 181 (558)
Q Consensus 103 ~~~~-~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~ 181 (558)
++|+ .+|+|.|-||.||.|+.++++--||+||.-..- | ........+.
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsq---------i----------------------~~~~v~~qlr 70 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQ---------I----------------------LKTQVEHQLR 70 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHH---------H----------------------HHhcchhhhh
Confidence 3566 789999999999999999999999999974320 0 0112223444
Q ss_pred hhhc--HHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHH---HhcCCCCHHHHHHHHHHHHH
Q 008643 182 EELD--YTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQA---IKGAGIDVGGFLTVGVSAAL 256 (558)
Q Consensus 182 ~Eld--~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~---~~~~~~~~~~~~~~~v~~~L 256 (558)
+|+. ....|+|+.+++..|-|...+ ||++||..++.+..... ....+......+..|++.|+
T Consensus 71 REiEIqs~L~hpnilrlY~~fhd~~ri-------------yLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al 137 (281)
T KOG0580|consen 71 REIEIQSHLRHPNILRLYGYFHDSKRI-------------YLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANAL 137 (281)
T ss_pred heeEeecccCCccHHhhhhheecccee-------------EEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHH
Confidence 4444 345699999999999987777 99999999888765332 12234555677899999999
Q ss_pred HHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHH
Q 008643 257 RQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPII 336 (558)
Q Consensus 257 ~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~ 336 (558)
.|+|..+++|||+||+|+|++.+|.+++.|||-+..-+...|. ++||+.+|++|++.+.-..+..+|+|++|
T Consensus 138 ~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~--------tlcgt~dyl~pEmv~~~~hd~~Vd~w~lg 209 (281)
T KOG0580|consen 138 LYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSNKRK--------TLCGTLDYLPPEMVEGRGHDKFVDLWSLG 209 (281)
T ss_pred HHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecCCCCce--------eeecccccCCHhhcCCCCccchhhHHHHH
Confidence 9999999999999999999999999999999998876655544 45689999999999998889999999999
Q ss_pred HHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 337 PALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 337 ~~l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
...++++- +..+|.-.. .++..+-+.+-.+.+|+..+.-++.+++. ++..+|.-+
T Consensus 210 vl~yeflv-----g~ppFes~~-~~etYkrI~k~~~~~p~~is~~a~dlI~~---ll~~~p~~r 264 (281)
T KOG0580|consen 210 VLCYEFLV-----GLPPFESQS-HSETYKRIRKVDLKFPSTISGGAADLISR---LLVKNPIER 264 (281)
T ss_pred HHHHHHHh-----cCCchhhhh-hHHHHHHHHHccccCCcccChhHHHHHHH---HhccCcccc
Confidence 99999986 334443332 55666667777778887777777777765 666777554
No 26
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.93 E-value=6.5e-26 Score=235.70 Aligned_cols=235 Identities=17% Similarity=0.164 Sum_probs=158.6
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|+||.||+|+.+.+|+.||||+.+..... +. + ....+.+|
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~----~~---~------------------------~~~~~~~E--- 68 (329)
T PTZ00263 23 GETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREIL----KM---K------------------------QVQHVAQE--- 68 (329)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHh----hh---h------------------------hHHHHHHH---
Confidence 57899999999999999889999999997642100 00 0 00011112
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHCCce
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLEFGLF 265 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~~Gi~ 265 (558)
.. +...+.+.+.+.+...+ ......+++|||++|++|.+...... ...+....+..|++.+|.|||+.|++
T Consensus 69 ---~~----~l~~l~hp~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~iv 140 (329)
T PTZ00263 69 ---KS----ILMELSHPFIVNMMCSF-QDENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDII 140 (329)
T ss_pred ---HH----HHHhCCCCCCCcEEEEE-EcCCEEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 11 12222233222222222 23456699999999999876543221 12333455778999999999999999
Q ss_pred ecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHh
Q 008643 266 HGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 266 H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~ 345 (558)
|+|+||.||+++.+|.++|+|||++..+..... ...+++.|+||+++.....+..+|+|++|+.+++++.+
T Consensus 141 H~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~---------~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg 211 (329)
T PTZ00263 141 YRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTF---------TLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAG 211 (329)
T ss_pred ecCCCHHHEEECCCCCEEEeeccCceEcCCCcc---------eecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcC
Confidence 999999999999999999999999987765321 23578999999999988888999999999999999974
Q ss_pred hcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCCh
Q 008643 346 SSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKF 401 (558)
Q Consensus 346 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~~ 401 (558)
.. ++...+... +.+.+....+.+|..+...++.++.. |+..||+-++
T Consensus 212 ~~--pf~~~~~~~----~~~~i~~~~~~~p~~~~~~~~~li~~---~L~~dP~~R~ 258 (329)
T PTZ00263 212 YP--PFFDDTPFR----IYEKILAGRLKFPNWFDGRARDLVKG---LLQTDHTKRL 258 (329)
T ss_pred CC--CCCCCCHHH----HHHHHhcCCcCCCCCCCHHHHHHHHH---HhhcCHHHcC
Confidence 32 222222222 22334445566676665556666654 6667775554
No 27
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.93 E-value=1.2e-26 Score=236.28 Aligned_cols=239 Identities=20% Similarity=0.248 Sum_probs=165.2
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCC---hhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhh
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGI---EPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEE 183 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~---~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~E 183 (558)
.+.||+|+||.||.+..+++|+..|||...-.- .+.+.+++.+|+.+.
T Consensus 22 ~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~----------------------------- 72 (313)
T KOG0198|consen 22 GKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLN----------------------------- 72 (313)
T ss_pred hccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCC-----------------------------
Confidence 468999999999999998889999999653221 112233333322221
Q ss_pred hcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc--CCCCHHHHHHHHHHHHHHHHHH
Q 008643 184 LDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG--AGIDVGGFLTVGVSAALRQLLE 261 (558)
Q Consensus 184 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~--~~~~~~~~~~~~v~~~L~~Lh~ 261 (558)
|+|++++++....... ...++.|||++|++|.+...... ...+..+.+.++++.||.|||+
T Consensus 73 ------~p~IV~~~G~~~~~~~-----------~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs 135 (313)
T KOG0198|consen 73 ------HPNIVQYYGSSSSREN-----------DEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHS 135 (313)
T ss_pred ------CCCEEeeCCccccccC-----------eeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 3444444432211111 14589999999999998754433 2344556788999999999999
Q ss_pred CCceecCCCCCCEEEec-CCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCC-CCCCCcccHHHHH
Q 008643 262 FGLFHGDPHPGNIFAMR-DGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFL-AKGTDVSPIIPAL 339 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~-dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~-~~~~Di~~l~~~l 339 (558)
+||+|||+||.|||+++ +|.+||.|||+++........ ........|++.+|+|+.+..|.. .+.+|+|++|+++
T Consensus 136 ~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~---~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtV 212 (313)
T KOG0198|consen 136 KGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTK---SDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTV 212 (313)
T ss_pred CCEeccCcccceEEEeCCCCeEEeccCcccccccccccc---ccccccccCCccccCchhhcCCCcCCccchhhhcCCEE
Confidence 99999999999999999 799999999999987741000 000122468999999999996644 4689999999999
Q ss_pred HHHHHhhcCCCCCCCCHHHHHHHHHHHHHhc-CCCCchhHHHHHHHHHHHHhhhhhcCCCCCh
Q 008643 340 EAIWQNSSGKGLADFNFRSVTGQFNKLVYNY-RIRIPERFSLVIRSLLTQEGICFTLKPDFKF 401 (558)
Q Consensus 340 ~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~lP~~~~~~~rsl~~legi~~~LdP~~~~ 401 (558)
-+|+++. .++..+ ......+..+..+. -..+|++++..++.++.. |...||+.+.
T Consensus 213 vEM~Tg~--~PW~~~--~~~~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~---C~~~~p~~Rp 268 (313)
T KOG0198|consen 213 VEMLTGK--PPWSEF--FEEAEALLLIGREDSLPEIPDSLSDEAKDFLRK---CFKRDPEKRP 268 (313)
T ss_pred EeccCCC--Ccchhh--cchHHHHHHHhccCCCCCCCcccCHHHHHHHHH---HhhcCcccCc
Confidence 9999852 233332 22233344444443 237888888888888876 7777776653
No 28
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.93 E-value=2.4e-25 Score=227.11 Aligned_cols=232 Identities=16% Similarity=0.149 Sum_probs=160.3
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|+||.||+|+.+.+|+.||||+........... ...+.+|+..
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~-------------------------------~~~~~~E~~~ 54 (291)
T cd05612 6 IKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQ-------------------------------EQHVHNEKRV 54 (291)
T ss_pred eeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHH-------------------------------HHHHHHHHHH
Confidence 368999999999999998899999999875421100000 0011112211
Q ss_pred H--HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHCC
Q 008643 187 T--LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLEFG 263 (558)
Q Consensus 187 ~--~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~~G 263 (558)
. ..|+|+.++...+.+...+ +++|||++|++|.++..... ........+..|++.+|.|||+.|
T Consensus 55 l~~l~hp~iv~~~~~~~~~~~~-------------~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 121 (291)
T cd05612 55 LKEVSHPFIIRLFWTEHDQRFL-------------YMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKE 121 (291)
T ss_pred HHhCCCCcHhhhHhhhccCCeE-------------EEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 1 1278888887776655443 89999999999877643222 122333457789999999999999
Q ss_pred ceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 008643 264 LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 264 i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~ 343 (558)
++|+|+||.||+++.+|.++++|||++..+..... ...++..|++|++......+..+|+|++|+.+++++
T Consensus 122 i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~---------~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~ 192 (291)
T cd05612 122 IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTW---------TLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEML 192 (291)
T ss_pred eeecCCCHHHeEECCCCCEEEEecCcchhccCCcc---------cccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHH
Confidence 99999999999999999999999999887654321 134788999999998777888999999999999999
Q ss_pred HhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 344 QNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 344 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
.+.. ++...+...+ .+.+......+|..+...++.++.. ++..||+-+
T Consensus 193 ~g~~--pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~li~~---~l~~dp~~R 240 (291)
T cd05612 193 VGYP--PFFDDNPFGI----YEKILAGKLEFPRHLDLYAKDLIKK---LLVVDRTRR 240 (291)
T ss_pred hCCC--CCCCCCHHHH----HHHHHhCCcCCCccCCHHHHHHHHH---HcCCCHHHc
Confidence 7432 2223332222 2233344556666555555555544 555666444
No 29
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=99.92 E-value=8.7e-26 Score=199.90 Aligned_cols=119 Identities=49% Similarity=0.794 Sum_probs=114.3
Q ss_pred HHhCCChHhhhcccCcceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHH
Q 008643 92 EELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAEL 171 (558)
Q Consensus 92 ~elg~~~~~~f~~~~~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~ 171 (558)
++||.+++++|++||++|||+||+||||+|++ ++|++|||||+||++.+.+..|+.+|+.++.+++++.+.. ..++..
T Consensus 1 e~lG~~~~~~F~~fd~~PlasASiaQVh~a~l-~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~-~~~~~~ 78 (119)
T PF03109_consen 1 EELGKPIDEIFDEFDPEPLASASIAQVHRARL-KDGEEVAVKVQRPGIEEQIEADLRILRRLARLLERLPPFR-RLDLEE 78 (119)
T ss_pred CCcCCCHHHHHHHCCcchhhheehhhheeeee-cccchhhhhhcchHHHHHHHHHHHHHHHHHHHHHHccccc-ccCHHH
Confidence 47999999999999999999999999999999 6899999999999999999999999999999999887766 789999
Q ss_pred HHHHHHHhhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceee
Q 008643 172 IVDEFGEKLLEELDYTLEARNMEDFLENFKDDPTVKIPRVY 212 (558)
Q Consensus 172 iv~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~ 212 (558)
+++||...+.+|+||.+|++|+.+|+.+|.+++.+.||++|
T Consensus 79 ~~~e~~~~l~~ElDf~~Ea~n~~~~~~~~~~~~~v~vP~vy 119 (119)
T PF03109_consen 79 IVDEFRDSLLEELDFRREAANLERFRKNFADSPRVYVPKVY 119 (119)
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCEecCCCC
Confidence 99999999999999999999999999999999999999987
No 30
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.92 E-value=1.8e-25 Score=233.68 Aligned_cols=235 Identities=20% Similarity=0.260 Sum_probs=158.6
Q ss_pred ceeeeeeccEEEEEEEcCCCcE-EEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 108 QTIAAASLGQVYRATLRETGED-VAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~-VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
+.+|+|+||+||+|.+ .|+. ||||+..+.-...-. .+. |
T Consensus 47 ~~iG~G~~g~V~~~~~--~g~~~vavK~~~~~~~~~~~--------------------------------~~~------f 86 (362)
T KOG0192|consen 47 EVLGSGSFGTVYKGKW--RGTDVVAVKIISDPDFDDES--------------------------------RKA------F 86 (362)
T ss_pred hhcccCCceeEEEEEe--CCceeEEEEEecchhcChHH--------------------------------HHH------H
Confidence 3499999999999999 4666 999998764311000 111 2
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHh-cCCCCHHH--HHHHHHHHHHHHHHHCC
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIK-GAGIDVGG--FLTVGVSAALRQLLEFG 263 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~-~~~~~~~~--~~~~~v~~~L~~Lh~~G 263 (558)
.+|+.-+.+ +.|.+.|.+..++.+-.....+||||++||+|.++.... +..++... .+..+++.|+.|||+.+
T Consensus 87 ~~E~~il~~----l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~ 162 (362)
T KOG0192|consen 87 RREASLLSR----LRHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEG 162 (362)
T ss_pred HHHHHHHHh----CCCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 222222222 334444444444333222458999999999999876552 34455544 46778999999999999
Q ss_pred -ceecCCCCCCEEEecCC-CeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHH--cCCCCCCCCcccHHHHH
Q 008643 264 -LFHGDPHPGNIFAMRDG-RIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTR--LGFLAKGTDVSPIIPAL 339 (558)
Q Consensus 264 -i~H~DlhPgNIlv~~dg-~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~--~g~~~~~~Di~~l~~~l 339 (558)
|+|||+||.|||++.++ ++||+|||+++....... ......|++.+|||++++ ...++.++|+|+||..+
T Consensus 163 ~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~------~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvl 236 (362)
T KOG0192|consen 163 PIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKT------SMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVL 236 (362)
T ss_pred CeeecccChhhEEEcCCCCEEEECCCccceeeccccc------cccCCCCCccccChhhhcCCCCcCCccchhhhHHHHH
Confidence 99999999999999998 999999999987664320 011246899999999999 56889999999999999
Q ss_pred HHHHHhhcCCCCCCCCHHHHHHHHHHHHHh-cCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 340 EAIWQNSSGKGLADFNFRSVTGQFNKLVYN-YRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 340 ~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
++++++. .++.+.+...+ ...++.+ ....+|......+.+++.. |+.-||+-+
T Consensus 237 WEl~t~~--~Pf~~~~~~~~---~~~v~~~~~Rp~~p~~~~~~l~~l~~~---CW~~dp~~R 290 (362)
T KOG0192|consen 237 WELLTGE--IPFEDLAPVQV---ASAVVVGGLRPPIPKECPPHLSSLMER---CWLVDPSRR 290 (362)
T ss_pred HHHHHCC--CCCCCCCHHHH---HHHHHhcCCCCCCCccCCHHHHHHHHH---hCCCCCCcC
Confidence 9999853 35555544333 3334433 2233444444444555544 777777554
No 31
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.92 E-value=9.4e-26 Score=233.77 Aligned_cols=237 Identities=17% Similarity=0.170 Sum_probs=155.4
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||+|+||.||+|+.+.+|+.||||+.++..... ..+ ...+..
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~------------------------------~~~~~~----- 44 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIA-KDE------------------------------VAHTLT----- 44 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hHH------------------------------HHHHHH-----
Confidence 36899999999999998899999999986421100 000 001111
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHCCcee
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLEFGLFH 266 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~~Gi~H 266 (558)
|.. +...+.+...+.+.. +.......+++|||++|++|.+...... ........+..|++.||.|||+.|++|
T Consensus 45 -e~~----~l~~l~hp~i~~~~~-~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH 118 (323)
T cd05571 45 -ESR----VLQNTRHPFLTALKY-SFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVY 118 (323)
T ss_pred -HHH----HHHhCCCCCCCCEEE-EEEcCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEe
Confidence 112 222222322222222 2233556799999999999866543221 122333456789999999999999999
Q ss_pred cCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHhh
Q 008643 267 GDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNS 346 (558)
Q Consensus 267 ~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~~ 346 (558)
+|+||.||+++.+|.++|+|||++......... .....++..|+||+++....++..+|+|++|+.+++++.+.
T Consensus 119 rDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~ 192 (323)
T cd05571 119 RDLKLENLMLDKDGHIKITDFGLCKEGISDGAT------MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 192 (323)
T ss_pred CCCCHHHEEECCCCCEEEeeCCCCcccccCCCc------ccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCC
Confidence 999999999999999999999998754322111 12235788999999998888889999999999999999743
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCCh
Q 008643 347 SGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKF 401 (558)
Q Consensus 347 ~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~~ 401 (558)
. ++...+...+ .+.+......+|..+..-++.++.. |+..||+-++
T Consensus 193 ~--Pf~~~~~~~~----~~~~~~~~~~~p~~~~~~~~~li~~---~L~~dP~~R~ 238 (323)
T cd05571 193 L--PFYNQDHEKL----FELILMEEIRFPRTLSPEAKSLLAG---LLKKDPKQRL 238 (323)
T ss_pred C--CCCCCCHHHH----HHHHHcCCCCCCCCCCHHHHHHHHH---HccCCHHHcC
Confidence 2 3333333332 2233344556666665555665544 5666775554
No 32
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.92 E-value=3.3e-25 Score=229.51 Aligned_cols=235 Identities=17% Similarity=0.168 Sum_probs=154.7
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||+|+||+||+|+.+.+|+.||||+.++.... .+- -......|....
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~---~~~----------------------------~~~~~~~e~~~l 49 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVIL---QDD----------------------------DVECTMTEKRIL 49 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHh---hcc----------------------------HHHHHHHHHHHH
Confidence 3689999999999999889999999997653110 000 000011111111
Q ss_pred ---HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHh-cCCCCHHHHHHHHHHHHHHHHHHCC
Q 008643 188 ---LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIK-GAGIDVGGFLTVGVSAALRQLLEFG 263 (558)
Q Consensus 188 ---~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~-~~~~~~~~~~~~~v~~~L~~Lh~~G 263 (558)
..|+|+.++...+.+ ....++||||++|++|.+..... .........+..|++.+|.|||+.|
T Consensus 50 ~~~~~h~~iv~~~~~~~~-------------~~~~~iv~Ey~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ 116 (320)
T cd05590 50 SLARNHPFLTQLYCCFQT-------------PDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKG 116 (320)
T ss_pred HhccCCCchhceeeEEEc-------------CCEEEEEEcCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 013444444333332 34559999999999987643322 1122334457789999999999999
Q ss_pred ceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 008643 264 LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 264 i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~ 343 (558)
++|+|+||+||+++.+|.++|+|||++......... .....+++.|+||++......++.+|+|++|+.+++++
T Consensus 117 ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~ 190 (320)
T cd05590 117 IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKT------TSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEML 190 (320)
T ss_pred eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCc------ccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHh
Confidence 999999999999999999999999998754322111 12235789999999998888888999999999999999
Q ss_pred HhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCCh
Q 008643 344 QNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKF 401 (558)
Q Consensus 344 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~~ 401 (558)
.+.. ++...+...+. +.+.......|+.+...++.++.. ++..||+-++
T Consensus 191 ~g~~--Pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~li~~---~L~~dP~~R~ 239 (320)
T cd05590 191 CGHA--PFEAENEDDLF----EAILNDEVVYPTWLSQDAVDILKA---FMTKNPTMRL 239 (320)
T ss_pred hCCC--CCCCCCHHHHH----HHHhcCCCCCCCCCCHHHHHHHHH---HcccCHHHCC
Confidence 7432 33333433333 233344455555555455555543 5566775544
No 33
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=5.8e-26 Score=232.39 Aligned_cols=257 Identities=16% Similarity=0.193 Sum_probs=189.3
Q ss_pred CCChHhhhcccCcceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHH
Q 008643 95 GRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVD 174 (558)
Q Consensus 95 g~~~~~~f~~~~~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~ 174 (558)
..+++..|..+ +.||.|+||.||+|.+..+++.||+|++.-+..+....
T Consensus 8 ~~~~~~~~~~~--~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIe----------------------------- 56 (467)
T KOG0201|consen 8 KIDPELLYTKL--ELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIE----------------------------- 56 (467)
T ss_pred cCCcccccccc--hhccccccceeeeeeeccccceEEEEEechhhcchhhH-----------------------------
Confidence 34556666666 68999999999999999999999999986432221111
Q ss_pred HHHHhhHhhhcHH--HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC-CCCHHHHHHHH
Q 008643 175 EFGEKLLEELDYT--LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA-GIDVGGFLTVG 251 (558)
Q Consensus 175 e~~~~l~~Eld~~--~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~-~~~~~~~~~~~ 251 (558)
-+.+|+.+. .+.+|+.+++..+-....+ +++||||.||++.+....... .+....++.+.
T Consensus 57 ----diqqei~~Ls~~~~~~it~yygsyl~g~~L-------------wiiMey~~gGsv~~lL~~~~~~~E~~i~~ilre 119 (467)
T KOG0201|consen 57 ----DIQQEISVLSQCDSPNITEYYGSYLKGTKL-------------WIIMEYCGGGSVLDLLKSGNILDEFEIAVILRE 119 (467)
T ss_pred ----HHHHHHHHHHhcCcchHHhhhhheeecccH-------------HHHHHHhcCcchhhhhccCCCCccceeeeehHH
Confidence 112222222 2357788887777655444 899999999999887544333 33334567889
Q ss_pred HHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCC
Q 008643 252 VSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTD 331 (558)
Q Consensus 252 v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~D 331 (558)
+..|+.|+|.++.+|+|+|+.||++..+|.++++|||.+.+++...... ..+-|++-+|||+++..-.+..++|
T Consensus 120 ~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr------~tfvGTPfwMAPEVI~~~~Y~~KAD 193 (467)
T KOG0201|consen 120 VLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRR------KTFVGTPFWMAPEVIKQSGYDTKAD 193 (467)
T ss_pred HHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhcc------ccccccccccchhhhccccccchhh
Confidence 9999999999999999999999999999999999999999998765432 2345899999999999767889999
Q ss_pred cccHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCChhHhhhHHHHH
Q 008643 332 VSPIIPALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKFLEVAYPYVAK 411 (558)
Q Consensus 332 i~~l~~~l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~~~~~a~p~v~~ 411 (558)
+|++|.+.+++..+. .|..+..- +..++-+....|.++-.+|+.-+|.++.. |+..||+++.. |+..+..
T Consensus 194 IWSLGITaiEla~Ge--PP~s~~hP---mrvlflIpk~~PP~L~~~~S~~~kEFV~~---CL~k~P~~Rps--A~~LLKh 263 (467)
T KOG0201|consen 194 IWSLGITAIELAKGE--PPHSKLHP---MRVLFLIPKSAPPRLDGDFSPPFKEFVEA---CLDKNPEFRPS--AKELLKH 263 (467)
T ss_pred hhhhhHHHHHHhcCC--CCCcccCc---ceEEEeccCCCCCccccccCHHHHHHHHH---HhhcCcccCcC--HHHHhhh
Confidence 999999999998632 22222211 22333345567777778899999999987 99999999854 4444444
Q ss_pred Hhhc
Q 008643 412 RLLT 415 (558)
Q Consensus 412 ~ll~ 415 (558)
.+++
T Consensus 264 ~FIk 267 (467)
T KOG0201|consen 264 KFIK 267 (467)
T ss_pred HHHH
Confidence 4444
No 34
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.92 E-value=4.2e-25 Score=228.50 Aligned_cols=238 Identities=15% Similarity=0.159 Sum_probs=154.2
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||.|+||+||+|+.+.+|+.||||+........-... ..+..|..
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~-------------------------------~~~~~e~~-- 47 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQ-------------------------------NHIMAERN-- 47 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHH-------------------------------HHHHHHHH--
Confidence 368999999999999988999999998764211000000 00111110
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHCCcee
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLEFGLFH 266 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~~Gi~H 266 (558)
.+...+.+.+.+.+-..+ ......+++|||++|++|.+...... ........+..|++.+|.|||..|++|
T Consensus 48 -------~~l~~~~h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH 119 (321)
T cd05603 48 -------VLLKNLKHPFLVGLHYSF-QTAEKLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIY 119 (321)
T ss_pred -------HHHHhCCCCCccceeeEE-EcCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 111222222222221111 22445699999999999865432211 122334457789999999999999999
Q ss_pred cCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHhh
Q 008643 267 GDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNS 346 (558)
Q Consensus 267 ~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~~ 346 (558)
+|+||+||+++.+|.++|+|||++......... .....+++.|++|+.+....++..+|+|++|+.+++++.+.
T Consensus 120 ~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~ 193 (321)
T cd05603 120 RDLKPENILLDSQGHVVLTDFGLCKEGVEPEET------TSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGL 193 (321)
T ss_pred ccCCHHHeEECCCCCEEEccCCCCccCCCCCCc------cccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCC
Confidence 999999999999999999999998753221111 11235788999999998888888999999999999998743
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCCh
Q 008643 347 SGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKF 401 (558)
Q Consensus 347 ~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~~ 401 (558)
. ++..-+... +.+.+...+..+|+.....++.++.. ++..||.-++
T Consensus 194 ~--pf~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~li~~---~l~~~p~~R~ 239 (321)
T cd05603 194 P--PFYSRDVSQ----MYDNILHKPLQLPGGKTVAACDLLVG---LLHKDQRRRL 239 (321)
T ss_pred C--CCCCCCHHH----HHHHHhcCCCCCCCCCCHHHHHHHHH---HccCCHhhcC
Confidence 2 222223222 33334455667776655555555544 6666775554
No 35
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.92 E-value=3.8e-25 Score=227.99 Aligned_cols=235 Identities=19% Similarity=0.197 Sum_probs=154.9
Q ss_pred eeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHHHH
Q 008643 110 IAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYTLE 189 (558)
Q Consensus 110 Ig~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~~E 189 (558)
||+|+||.||+|+.+.+|+.||+|+.+...... ..+ ...+.. |
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~-~~~------------------------------~~~~~~------E 43 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVS-RSE------------------------------VTHTLA------E 43 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhH------------------------------HHHHHH------H
Confidence 689999999999998899999999875321000 000 001111 1
Q ss_pred HHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHCCceecC
Q 008643 190 ARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLEFGLFHGD 268 (558)
Q Consensus 190 a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~~Gi~H~D 268 (558)
...+ ..+.+.+.+.+... .......+++|||++|++|.+...... ........+..|++.+|.|||+.|++|+|
T Consensus 44 ~~~l----~~l~h~~iv~~~~~-~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrD 118 (312)
T cd05585 44 RTVL----AQVNCPFIVPLKFS-FQSPEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRD 118 (312)
T ss_pred HHHH----HhCCCCcEeceeeE-EecCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCC
Confidence 1111 12222222222122 223456699999999999976543221 22334455778999999999999999999
Q ss_pred CCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHhhcC
Q 008643 269 PHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNSSG 348 (558)
Q Consensus 269 lhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~~~~ 348 (558)
+||+||+++.+|.++++|||++......... .....++..|+||+......++..+|+|++|+.+++++++..
T Consensus 119 lkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~- 191 (312)
T cd05585 119 LKPENILLDYQGHIALCDFGLCKLNMKDDDK------TNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLP- 191 (312)
T ss_pred CCHHHeEECCCCcEEEEECcccccCccCCCc------cccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCC-
Confidence 9999999999999999999998754322211 122357889999999988888889999999999999997532
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCCh
Q 008643 349 KGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKF 401 (558)
Q Consensus 349 ~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~~ 401 (558)
++...+... +.+.....++.+|..+...++.++.. |+..||+-++
T Consensus 192 -pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~li~~---~L~~dp~~R~ 236 (312)
T cd05585 192 -PFYDENVNE----MYRKILQEPLRFPDGFDRDAKDLLIG---LLSRDPTRRL 236 (312)
T ss_pred -CcCCCCHHH----HHHHHHcCCCCCCCcCCHHHHHHHHH---HcCCCHHHcC
Confidence 222333332 22334455667777666666666654 6666665443
No 36
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.92 E-value=2.8e-25 Score=230.85 Aligned_cols=236 Identities=16% Similarity=0.166 Sum_probs=154.0
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||+|+||+||+|+.+.+|+.||||+.++..... ..+ ... +.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-~~~------------------------------~~~------~~ 43 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIA-KDE------------------------------VAH------TL 43 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhH------------------------------HHH------HH
Confidence 36899999999999998899999999986431100 000 001 11
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHCCcee
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLEFGLFH 266 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~~Gi~H 266 (558)
+|.. ....+.+ +.+.-...+.......++||||++|++|.+...... ........+..|++.||.|||+.|++|
T Consensus 44 ~E~~----~l~~l~h-p~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH 118 (328)
T cd05593 44 TESR----VLKNTRH-PFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVY 118 (328)
T ss_pred HHHH----HHHhCCC-CCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEe
Confidence 1222 1222223 322211222233556799999999999865432221 122334457789999999999999999
Q ss_pred cCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHhh
Q 008643 267 GDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNS 346 (558)
Q Consensus 267 ~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~~ 346 (558)
+|+||.||+++.+|.++|+|||++......... .....+++.|++|+.+..+..+..+|+|++|+.+++++.+.
T Consensus 119 rDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~ 192 (328)
T cd05593 119 RDLKLENLMLDKDGHIKITDFGLCKEGITDAAT------MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 192 (328)
T ss_pred cccCHHHeEECCCCcEEEecCcCCccCCCcccc------cccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCC
Confidence 999999999999999999999998764322111 12235788999999998888889999999999999999743
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 347 SGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 347 ~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
. ++...+...+ .+.+....+.+|..+..-++.++.. ++..||+-+
T Consensus 193 ~--Pf~~~~~~~~----~~~~~~~~~~~p~~~~~~~~~li~~---~L~~dP~~R 237 (328)
T cd05593 193 L--PFYNQDHEKL----FELILMEDIKFPRTLSADAKSLLSG---LLIKDPNKR 237 (328)
T ss_pred C--CCCCCCHHHH----HHHhccCCccCCCCCCHHHHHHHHH---HcCCCHHHc
Confidence 2 3322233322 2233334455666555555555543 555666443
No 37
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.91 E-value=6.4e-25 Score=227.51 Aligned_cols=235 Identities=17% Similarity=0.142 Sum_probs=152.9
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH-
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY- 186 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~- 186 (558)
+.||+|++|.||+|+.+.+|+.||||+.++..... ..+. +.+..|...
T Consensus 5 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~------------------------------~~l~~e~~~~ 53 (324)
T cd05589 5 AVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIA-RDEV------------------------------ESLMCEKRIF 53 (324)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhHH------------------------------HHHHHHHHHH
Confidence 67999999999999998899999999986431000 0000 011111110
Q ss_pred ----HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHC
Q 008643 187 ----TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEF 262 (558)
Q Consensus 187 ----~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~ 262 (558)
...|+|+.++.+.+. .....++||||++|++|................+..+++.|+.|||+.
T Consensus 54 ~~~~~l~hp~i~~~~~~~~-------------~~~~~~lv~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~ 120 (324)
T cd05589 54 ETANSERHPFLVNLFACFQ-------------TEDHVCFVMEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHEN 120 (324)
T ss_pred HhccccCCCChhceeeEEE-------------cCCEEEEEEcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 001344444433332 244569999999999886543222222333455778999999999999
Q ss_pred CceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHH
Q 008643 263 GLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAI 342 (558)
Q Consensus 263 Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l 342 (558)
|++|+|+||+||+++.+|.++|+|||++......... .....+++.|++|+.+..+..+..+|+|++|+.++++
T Consensus 121 ~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el 194 (324)
T cd05589 121 KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDR------TSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEM 194 (324)
T ss_pred CeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCc------ccccccCccccCHhHhcCCCCCcccchhhHHHHHHHH
Confidence 9999999999999999999999999998754322111 1123578899999999888888899999999999999
Q ss_pred HHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCCh
Q 008643 343 WQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKF 401 (558)
Q Consensus 343 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~~ 401 (558)
+.+.. ++...+...+...+ .......|..+...++.++.. |+..||+-++
T Consensus 195 ~~G~~--pf~~~~~~~~~~~i----~~~~~~~p~~~~~~~~~li~~---~L~~dP~~R~ 244 (324)
T cd05589 195 LVGES--PFPGDDEEEVFDSI----VNDEVRYPRFLSREAISIMRR---LLRRNPERRL 244 (324)
T ss_pred HhCCC--CCCCCCHHHHHHHH----HhCCCCCCCCCCHHHHHHHHH---HhhcCHhHcC
Confidence 97432 33333333333332 233334444444444444433 5566776553
No 38
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.91 E-value=2.4e-25 Score=229.61 Aligned_cols=189 Identities=20% Similarity=0.272 Sum_probs=139.4
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||.|+||.||+|+.+.+|+.||||.++..... -.|.--||.+..+. =.
T Consensus 16 ~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s--~ee~~nLREvksL~----------------------------kl 65 (538)
T KOG0661|consen 16 RKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS--WEECMNLREVKSLR----------------------------KL 65 (538)
T ss_pred HHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc--HHHHHHHHHHHHHH----------------------------hc
Confidence 6799999999999999999999999987654322 11222222221110 01
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCC--CHHHHHHHHHHHHHHHHHHCCce
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGI--DVGGFLTVGVSAALRQLLEFGLF 265 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~--~~~~~~~~~v~~~L~~Lh~~Gi~ 265 (558)
++|+|+.++.+.+.++.. ..++||||++. .|.++..-+..-. ...+-+..||+.||.++|.+|||
T Consensus 66 n~hpniikL~Evi~d~~~------------~L~fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfF 132 (538)
T KOG0661|consen 66 NPHPNIIKLKEVIRDNDR------------ILYFVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFF 132 (538)
T ss_pred CCCCcchhhHHHhhccCc------------eEeeeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 358899999998887651 23999999984 5555433332222 33455889999999999999999
Q ss_pred ecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHh
Q 008643 266 HGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 266 H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~ 345 (558)
|||+||+|||+.....+||.|||+++.+...... ++. +...+...++.+++-|+++..+|+|++|+++++++.-
T Consensus 133 HRDlKPENiLi~~~~~iKiaDFGLARev~SkpPY--TeY----VSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sL 206 (538)
T KOG0661|consen 133 HRDLKPENILISGNDVIKIADFGLAREVRSKPPY--TEY----VSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSL 206 (538)
T ss_pred cccCChhheEecccceeEecccccccccccCCCc--chh----hhcccccchHHhhhccccCCchHHHHHHHHHHHHHHh
Confidence 9999999999998889999999999998765433 222 2234445566778889999999999999999999863
No 39
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.91 E-value=4.7e-25 Score=228.45 Aligned_cols=236 Identities=17% Similarity=0.193 Sum_probs=151.6
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||+|+||+||+|+.+.+|+.||||+.++.....- .+ ...+..|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-~~------------------------------~~~~~~e---- 45 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKK-KE------------------------------QKHIMAE---- 45 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhh-hH------------------------------HHHHHHH----
Confidence 368999999999999988999999998764211000 00 0001111
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCC--HHHHHHHHHHHHHHHHHHCCce
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGID--VGGFLTVGVSAALRQLLEFGLF 265 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~--~~~~~~~~v~~~L~~Lh~~Gi~ 265 (558)
. ..+...+.+...+.+...+ ......+++|||++|++|.+..... ...+ ....+..|++.||.|||+.|++
T Consensus 46 --~---~~~~~~l~hp~iv~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~giv 118 (323)
T cd05575 46 --R---NVLLKNVKHPFLVGLHYSF-QTADKLYFVLDYVNGGELFFHLQRE-RSFPEPRARFYAAEIASALGYLHSLNII 118 (323)
T ss_pred --H---HHHHhhCCCCCCCCeeEEE-EeCCEEEEEEcCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 1 1122223333323222222 2345679999999999987653322 2233 3345778999999999999999
Q ss_pred ecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHh
Q 008643 266 HGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 266 H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~ 345 (558)
|+|+||+||+++.+|.++|+|||++......... .....+++.|++|+.+..+..+..+|+|++|+.+++++.+
T Consensus 119 H~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g 192 (323)
T cd05575 119 YRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKT------TSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYG 192 (323)
T ss_pred eCCCCHHHeEECCCCcEEEeccCCCcccccCCCc------cccccCChhhcChhhhcCCCCCccccccccchhhhhhhcC
Confidence 9999999999999999999999998754322111 1123578899999999888888999999999999999974
Q ss_pred hcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 346 SSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 346 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
.. ++...+..++.. .+...+..+|+.+...++.++.. ++..||+-+
T Consensus 193 ~~--pf~~~~~~~~~~----~i~~~~~~~~~~~~~~~~~li~~---~l~~~p~~R 238 (323)
T cd05575 193 LP--PFYSRDTAEMYD----NILNKPLRLKPNISVSARHLLEG---LLQKDRTKR 238 (323)
T ss_pred CC--CCCCCCHHHHHH----HHHcCCCCCCCCCCHHHHHHHHH---HhhcCHHhC
Confidence 32 333333333322 23334455555444444444433 445555444
No 40
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.91 E-value=2.1e-25 Score=231.23 Aligned_cols=236 Identities=17% Similarity=0.179 Sum_probs=152.1
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||+|+||.||+|+.+.+|..||+|+.+...... ..+. ..+..|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~------------------------------~~~~~E---- 45 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA-KDEV------------------------------AHTVTE---- 45 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hHHH------------------------------HHHHHH----
Confidence 36899999999999998899999999986431100 0000 011111
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHCCcee
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLEFGLFH 266 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~~Gi~H 266 (558)
.. ....+.+...+.+...+ ......++||||++|++|.+...... ........+..|++.||.|||++|++|
T Consensus 46 --~~----~l~~l~hp~i~~~~~~~-~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH 118 (323)
T cd05595 46 --SR----VLQNTRHPFLTALKYAF-QTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVY 118 (323)
T ss_pred --HH----HHHhCCCCCCcceeeEE-ecCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 11 11222222222221111 22445699999999999865432221 123334557789999999999999999
Q ss_pred cCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHhh
Q 008643 267 GDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNS 346 (558)
Q Consensus 267 ~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~~ 346 (558)
+|+||.||+++.+|.++|+|||++......... .....+++.|++|+....+..+..+|+|++|+.+++++.+.
T Consensus 119 ~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~ 192 (323)
T cd05595 119 RDIKLENLMLDKDGHIKITDFGLCKEGISDGAT------MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 192 (323)
T ss_pred cCCCHHHEEEcCCCCEEecccHHhccccCCCCc------cccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCC
Confidence 999999999999999999999998754221111 11235788999999998888889999999999999999743
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 347 SGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 347 ~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
. ++...+...... .+......+|..+..-++.++.. |+..||+-+
T Consensus 193 ~--Pf~~~~~~~~~~----~~~~~~~~~p~~~~~~~~~li~~---~L~~dP~~R 237 (323)
T cd05595 193 L--PFYNQDHERLFE----LILMEEIRFPRTLSPEAKSLLAG---LLKKDPKQR 237 (323)
T ss_pred C--CCCCCCHHHHHH----HHhcCCCCCCCCCCHHHHHHHHH---HccCCHHHh
Confidence 2 333333333322 23334455565555555555544 555666433
No 41
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.91 E-value=6.3e-25 Score=227.68 Aligned_cols=237 Identities=16% Similarity=0.125 Sum_probs=150.5
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||+|+||.||+|+.+.+|+.||+|+.+......-... .++.
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~-------------------------------------~~~~ 43 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEE-------------------------------------KHIM 43 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHH-------------------------------------HHHH
Confidence 368999999999999988999999999764211000000 0000
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC-CCCHHHHHHHHHHHHHHHHHHCCcee
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA-GIDVGGFLTVGVSAALRQLLEFGLFH 266 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~-~~~~~~~~~~~v~~~L~~Lh~~Gi~H 266 (558)
.|.. .+...+.+...+.+-. +.......+++|||++|++|.+....... .......+..|++.||.|||+.|++|
T Consensus 44 ~e~~---~~l~~~~h~~Iv~~~~-~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiH 119 (325)
T cd05602 44 SERN---VLLKNVKHPFLVGLHF-SFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVY 119 (325)
T ss_pred HHHH---HHHHhCCCCCCCceeE-EEEcCCeEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 1110 1122232322222222 22334567999999999998765432211 22333457789999999999999999
Q ss_pred cCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHhh
Q 008643 267 GDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNS 346 (558)
Q Consensus 267 ~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~~ 346 (558)
||+||+||+++.+|.++|+|||++......... .....+++.|++|+++..+.++..+|+|++|+.+++++.+.
T Consensus 120 rDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~ 193 (325)
T cd05602 120 RDLKPENILLDSQGHIVLTDFGLCKENIEHNGT------TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGL 193 (325)
T ss_pred cCCCHHHeEECCCCCEEEccCCCCcccccCCCC------cccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCC
Confidence 999999999999999999999998754322111 11235788999999998888888999999999999999743
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 347 SGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 347 ~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
. ++...+....... +...+..+++.+...++.++.. ++..||+-+
T Consensus 194 ~--pf~~~~~~~~~~~----i~~~~~~~~~~~~~~~~~li~~---~l~~~p~~R 238 (325)
T cd05602 194 P--PFYSRNTAEMYDN----ILNKPLQLKPNITNSARHLLEG---LLQKDRTKR 238 (325)
T ss_pred C--CCCCCCHHHHHHH----HHhCCcCCCCCCCHHHHHHHHH---HcccCHHHC
Confidence 2 3333333333222 2334444444444444444433 444555433
No 42
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.91 E-value=6.4e-24 Score=215.79 Aligned_cols=241 Identities=18% Similarity=0.146 Sum_probs=157.4
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|+||.||+|..+.+|+.||||+.+........ .+..+
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~-------------------------------------~~~~~ 47 (285)
T cd05631 5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRK-------------------------------------GEAMA 47 (285)
T ss_pred EEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhh-------------------------------------hHHHH
Confidence 36899999999999999889999999987643211000 00111
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHH--HHHHHHHHHHHHHHHHCC
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVG--GFLTVGVSAALRQLLEFG 263 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~--~~~~~~v~~~L~~Lh~~G 263 (558)
.+|...+ ..+.+...+.+...+ ......+++|||++|++|.+...... .+.+.. ..+..|++.++.|||+.|
T Consensus 48 ~~E~~il----~~l~~~~iv~~~~~~-~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 122 (285)
T cd05631 48 LNEKRIL----EKVNSRFVVSLAYAY-ETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER 122 (285)
T ss_pred HHHHHHH----HhcCCCcEEEEEEEE-ccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 2222222 223333333333322 33456799999999999976543222 223333 446779999999999999
Q ss_pred ceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 008643 264 LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 264 i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~ 343 (558)
++|+|+||.||+++.++.++++|||++..+...... ....++..|++|++...+..+..+|+|++|+.+++++
T Consensus 123 iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~-------~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~ 195 (285)
T cd05631 123 IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETV-------RGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMI 195 (285)
T ss_pred EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCee-------cCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHH
Confidence 999999999999999999999999999876533211 1124688899999999888899999999999999999
Q ss_pred HhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCCh
Q 008643 344 QNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKF 401 (558)
Q Consensus 344 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~~ 401 (558)
.+.. ++...+.......+...+...+...|..++..++.++.. |+..||+-++
T Consensus 196 ~g~~--pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~---~l~~~P~~R~ 248 (285)
T cd05631 196 QGQS--PFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICRM---LLTKNPKERL 248 (285)
T ss_pred hCCC--CCCCCCcchhHHHHHHHhhcccccCCccCCHHHHHHHHH---HhhcCHHHhc
Confidence 7533 222211111223333333344444555555555555544 6667775443
No 43
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.91 E-value=7.5e-24 Score=219.45 Aligned_cols=239 Identities=17% Similarity=0.132 Sum_probs=158.0
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|+||.||+|+.+.+|+.||||+.++..... ..+. .. +
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~------------------------------~~------~ 47 (323)
T cd05616 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQ-DDDV------------------------------EC------T 47 (323)
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHH------------------------------HH------H
Confidence 368999999999999998899999999986532100 0000 00 0
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHCCce
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLEFGLF 265 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~~Gi~ 265 (558)
..|.. ......+++.+.....+.......++||||++|++|.+...... ........+..|++.+|.|||+.|++
T Consensus 48 ~~e~~----~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~iv 123 (323)
T cd05616 48 MVEKR----VLALSGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGII 123 (323)
T ss_pred HHHHH----HHHhccCCCeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence 11111 11222334444322222333456789999999999876543221 12333455778999999999999999
Q ss_pred ecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHh
Q 008643 266 HGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 266 H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~ 345 (558)
|+|+||+||+++.+|.++|+|||++......... .....+++.|+||+++..+.++..+|+|++|+.+++++++
T Consensus 124 HrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg 197 (323)
T cd05616 124 YRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVT------TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAG 197 (323)
T ss_pred ecCCCHHHeEECCCCcEEEccCCCceecCCCCCc------cccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhC
Confidence 9999999999999999999999998754322111 1223578999999999988889999999999999999974
Q ss_pred hcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCCh
Q 008643 346 SSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKF 401 (558)
Q Consensus 346 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~~ 401 (558)
.. ++...+...+... +......+|..++.-++.++.. ++..||+-++
T Consensus 198 ~~--Pf~~~~~~~~~~~----i~~~~~~~p~~~s~~~~~li~~---~l~~~p~~R~ 244 (323)
T cd05616 198 QA--PFEGEDEDELFQS----IMEHNVAYPKSMSKEAVAICKG---LMTKHPGKRL 244 (323)
T ss_pred CC--CCCCCCHHHHHHH----HHhCCCCCCCcCCHHHHHHHHH---HcccCHHhcC
Confidence 32 3333333333333 3344555555555555555543 5666775553
No 44
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.91 E-value=6.7e-24 Score=220.58 Aligned_cols=243 Identities=17% Similarity=0.178 Sum_probs=157.2
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||+|+||.||+|+.+.+|+.||||+.++.....- .+. ..+..|.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~-~~~------------------------------~~~~~e~--- 46 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDD-EDI------------------------------DWVQTEK--- 46 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhh-hHH------------------------------HHHHHHH---
Confidence 368999999999999988999999999865321100 000 0111111
Q ss_pred HHHHHHHHHHHhcCCCCCe-eeceeeecCCCceEEEEeeeCCCCCCCHHHHh-cCCCCHHHHHHHHHHHHHHHHHHCCce
Q 008643 188 LEARNMEDFLENFKDDPTV-KIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIK-GAGIDVGGFLTVGVSAALRQLLEFGLF 265 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v-~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~-~~~~~~~~~~~~~v~~~L~~Lh~~Gi~ 265 (558)
.+.....+++.+ .+-.. ....+..+++|||++|++|.+..... .........+..|++.+|.|||+.|++
T Consensus 47 -------~il~~~~~hp~Iv~~~~~-~~~~~~~~lv~e~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iv 118 (329)
T cd05588 47 -------HVFETASNHPFLVGLHSC-FQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGII 118 (329)
T ss_pred -------HHHHhccCCCCCCceEEE-EEcCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 111222223332 22222 22345679999999999986543221 122333445778999999999999999
Q ss_pred ecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHh
Q 008643 266 HGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 266 H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~ 345 (558)
|+|+||+||+++.+|.++|+|||++......... .....++..|++|+.+..+.++..+|+|++|+.+++++.+
T Consensus 119 H~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g 192 (329)
T cd05588 119 YRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDT------TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 192 (329)
T ss_pred ecCCCHHHeEECCCCCEEECcCccccccccCCCc------cccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHC
Confidence 9999999999999999999999998753211110 1123578899999999988888999999999999999985
Q ss_pred hcCCCCC---CCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCCh
Q 008643 346 SSGKGLA---DFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKF 401 (558)
Q Consensus 346 ~~~~~~~---~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~~ 401 (558)
..+.... +.........+.+.+...++++|..+..-++.++.. ++..||+-++
T Consensus 193 ~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~---~L~~dP~~R~ 248 (329)
T cd05588 193 RSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSLSVKASSVLKG---FLNKDPKERL 248 (329)
T ss_pred CCCcccccccccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHH---HhccCHHHcC
Confidence 3322110 000111123344455566677777666656666544 5666665443
No 45
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.91 E-value=1.1e-24 Score=226.57 Aligned_cols=240 Identities=17% Similarity=0.170 Sum_probs=158.0
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||+|+||+||+|+.+.+|+.||+|+.+....... .+. ..+..|....
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-~~~------------------------------~~~~~E~~~l 49 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDD-EDI------------------------------DWVQTEKHVF 49 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcch-hHH------------------------------HHHHHHHHHH
Confidence 369999999999999988999999999865321100 000 0111111110
Q ss_pred H---HHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCC--HHHHHHHHHHHHHHHHHHC
Q 008643 188 L---EARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGID--VGGFLTVGVSAALRQLLEF 262 (558)
Q Consensus 188 ~---Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~--~~~~~~~~v~~~L~~Lh~~ 262 (558)
. .|+|+.++...+ ...+..+++|||++|++|.+.... ....+ ....+..+++.++.|||+.
T Consensus 50 ~~~~~hp~iv~~~~~~-------------~~~~~~~lv~E~~~~~~L~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~ 115 (329)
T cd05618 50 EQASNHPFLVGLHSCF-------------QTESRLFFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEISLALNYLHER 115 (329)
T ss_pred HhcCCCCcCCceeeEE-------------EeCCEEEEEEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 0 133333332222 234566999999999998654322 22233 3345778999999999999
Q ss_pred CceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHH
Q 008643 263 GLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAI 342 (558)
Q Consensus 263 Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l 342 (558)
|++|+|+||+||+++.+|.++|+|||++......... .....+++.|++|+....+..+..+|+|++|+.++++
T Consensus 116 ~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 189 (329)
T cd05618 116 GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT------TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 189 (329)
T ss_pred CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCc------cccccCCccccCHHHHcCCCCCCccceecccHHHHHH
Confidence 9999999999999999999999999998754221111 1123578899999999988888899999999999999
Q ss_pred HHhhcCCCC---CCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCCh
Q 008643 343 WQNSSGKGL---ADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKF 401 (558)
Q Consensus 343 ~~~~~~~~~---~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~~ 401 (558)
+++..+... ...........+.+.+......+|..+...++.++.. |+..||+-++
T Consensus 190 ~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~---~L~~dP~~R~ 248 (329)
T cd05618 190 MAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKS---FLNKDPKERL 248 (329)
T ss_pred hhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCCCCCHHHHHHHHH---HhcCCHHHcC
Confidence 985432110 0000111122344445556667777766666666654 6667776554
No 46
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.91 E-value=1.1e-24 Score=225.09 Aligned_cols=234 Identities=19% Similarity=0.190 Sum_probs=150.3
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH-
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY- 186 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~- 186 (558)
+.||+|+||.||+|+.+.+|+.||||+.+...... ..+. .....|...
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~------------------------------~~~~~e~~~l 49 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLE-DDDV------------------------------ECTMVERRVL 49 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhhH------------------------------HHHHHHHHHH
Confidence 36899999999999998899999999987532100 0000 000001000
Q ss_pred --HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHCC
Q 008643 187 --TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLEFG 263 (558)
Q Consensus 187 --~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~~G 263 (558)
...|+|+.++...+ ......++||||++|++|.+...... ........+..|++.||.|||+.|
T Consensus 50 ~~~~~hp~i~~~~~~~-------------~~~~~~~lv~e~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ 116 (316)
T cd05592 50 ALAWEHPFLTHLFCTF-------------QTKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKG 116 (316)
T ss_pred HhccCCCCccceeeEE-------------EcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 01133333332222 22345689999999999876543221 123334557789999999999999
Q ss_pred ceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 008643 264 LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 264 i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~ 343 (558)
++|+|+||+||+++.+|.++|+|||++......... .....++..|++|+.+.....+..+|+|++|+.+++++
T Consensus 117 ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell 190 (316)
T cd05592 117 IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGK------ASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEML 190 (316)
T ss_pred EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCc------cccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHH
Confidence 999999999999999999999999998765332211 12235788999999998888888999999999999999
Q ss_pred HhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 344 QNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 344 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
.+.. ++...+...+... +......+|..+...++.++.. |+..||+-+
T Consensus 191 ~G~~--Pf~~~~~~~~~~~----i~~~~~~~~~~~~~~~~~ll~~---~l~~~P~~R 238 (316)
T cd05592 191 IGQS--PFHGEDEDELFDS----ILNDRPHFPRWISKEAKDCLSK---LFERDPTKR 238 (316)
T ss_pred hCCC--CCCCCCHHHHHHH----HHcCCCCCCCCCCHHHHHHHHH---HccCCHHHc
Confidence 7432 3333333333332 2233334454444444444433 444555433
No 47
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.91 E-value=3.1e-24 Score=207.25 Aligned_cols=212 Identities=20% Similarity=0.232 Sum_probs=146.7
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.+|+|.||.||+|++..+|+.||||.++.+-.+ -|.+ .+..+|+.+
T Consensus 7 ~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~k-----------------------dGi~---------~talREIK~ 54 (318)
T KOG0659|consen 7 LEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAK-----------------------DGIN---------RTALREIKL 54 (318)
T ss_pred hhhhcCcceEEEEEEEecCCCcEEEEEEeeccccc-----------------------cCcc---------HHHHHHHHH
Confidence 46799999999999999999999999988765211 0111 122233333
Q ss_pred HHH--HHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHHHHHHHHHHHHC
Q 008643 187 TLE--ARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVGVSAALRQLLEF 262 (558)
Q Consensus 187 ~~E--a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~v~~~L~~Lh~~ 262 (558)
.+| |+|+..+.+.|.+...+ .||.||++. +|....+-+..-+.+. +.+..+++.|+.|||++
T Consensus 55 Lqel~h~nIi~LiD~F~~~~~l-------------~lVfEfm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~ 120 (318)
T KOG0659|consen 55 LQELKHPNIIELIDVFPHKSNL-------------SLVFEFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSK 120 (318)
T ss_pred HHHccCcchhhhhhhccCCCce-------------EEEEEeccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhh
Confidence 322 89999999999887766 899999983 3332222222223343 45788899999999999
Q ss_pred CceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHH-HcCCCCCCCCcccHHHHHHH
Q 008643 263 GLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFT-RLGFLAKGTDVSPIIPALEA 341 (558)
Q Consensus 263 Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~-~~g~~~~~~Di~~l~~~l~~ 341 (558)
.|+|||+||.|+|++++|.+|+.|||+++.+.+..+...-+ +...+ |-|||++ ....++.++|+|+.||.+.+
T Consensus 121 ~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~~-----V~TRW-YRAPELLfGsr~Yg~~VDmWavGCI~AE 194 (318)
T KOG0659|consen 121 WILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTHQ-----VVTRW-YRAPELLFGSRQYGTGVDMWAVGCIFAE 194 (318)
T ss_pred hhhcccCCccceEEcCCCcEEeecccchhccCCCCcccccc-----eeeee-ccChHHhccchhcCCcchhhhHHHHHHH
Confidence 99999999999999999999999999999988765543211 11122 2345543 34557889999999999999
Q ss_pred HHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCc
Q 008643 342 IWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIP 375 (558)
Q Consensus 342 l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP 375 (558)
++-+. ++ |.-..-++++..+.+..+-..|
T Consensus 195 Lllr~---P~--fpG~sDidQL~~If~~LGTP~~ 223 (318)
T KOG0659|consen 195 LLLRV---PF--FPGDSDIDQLSKIFRALGTPTP 223 (318)
T ss_pred HHccC---CC--CCCCchHHHHHHHHHHcCCCCc
Confidence 98642 21 1112224666666665554444
No 48
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.91 E-value=7.2e-24 Score=220.13 Aligned_cols=244 Identities=17% Similarity=0.146 Sum_probs=159.2
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||+|+||+||+|+.+.+|+.||||+.+...... ..+ ...+..|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~------------------------------~~~~~~e---- 45 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHD-DED------------------------------IDWVQTE---- 45 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhH------------------------------HHHHHHH----
Confidence 36999999999999998899999999986532110 000 0011111
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHh-cCCCCHHHHHHHHHHHHHHHHHHCCcee
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIK-GAGIDVGGFLTVGVSAALRQLLEFGLFH 266 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~-~~~~~~~~~~~~~v~~~L~~Lh~~Gi~H 266 (558)
. .......+++.+.-...+.......++||||++|++|.+..... .........+..|++.|+.|||+.|++|
T Consensus 46 --~----~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivH 119 (327)
T cd05617 46 --K----HVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIY 119 (327)
T ss_pred --H----HHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 1 12222233443322222233456679999999999986543221 1223334567789999999999999999
Q ss_pred cCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHhh
Q 008643 267 GDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNS 346 (558)
Q Consensus 267 ~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~~ 346 (558)
+|+||+||+++.+|.++|+|||++......... .....++..|+||+....+..+..+|+|++|+.+++++.+.
T Consensus 120 rDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~ 193 (327)
T cd05617 120 RDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDT------TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGR 193 (327)
T ss_pred cCCCHHHEEEeCCCCEEEeccccceeccCCCCc------eecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCC
Confidence 999999999999999999999998753221111 11235788999999998888889999999999999999754
Q ss_pred cCCCCC-CCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCCh
Q 008643 347 SGKGLA-DFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKF 401 (558)
Q Consensus 347 ~~~~~~-~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~~ 401 (558)
.+.... .-........+.+.+...++++|..++.-++.++.. ++..||+-++
T Consensus 194 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~---~L~~dP~~R~ 246 (327)
T cd05617 194 SPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLSVKASHVLKG---FLNKDPKERL 246 (327)
T ss_pred CCCCccCCCcccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHH---HhccCHHHcC
Confidence 322110 000111223344455566777777665555555544 5566775443
No 49
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.91 E-value=1.2e-24 Score=224.95 Aligned_cols=238 Identities=18% Similarity=0.176 Sum_probs=153.0
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||+|+||.||+|+.+.+|+.||||+.++.... ...+. ....
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~------------------------------~~~~------ 43 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVL-IDDDV------------------------------ECTM------ 43 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hcchH------------------------------HHHH------
Confidence 3689999999999999889999999998653210 00000 0001
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHCCcee
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLEFGLFH 266 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~~Gi~H 266 (558)
.|.. ......+++.+.-...+....+..++||||++|++|.+...... ........+..|++.+|.|||+.|++|
T Consensus 44 ~e~~----~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH 119 (316)
T cd05620 44 VEKR----VLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIY 119 (316)
T ss_pred HHHH----HHHhccCCCCccCeeEEEEeCCEEEEEECCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 1111 11111122322111112233456799999999999876533221 122333457789999999999999999
Q ss_pred cCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHhh
Q 008643 267 GDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNS 346 (558)
Q Consensus 267 ~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~~ 346 (558)
+|+||+||+++.+|.++|+|||++......... .....++..|+||+++..+.+++.+|+|++|+.+++++.+.
T Consensus 120 rDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~ 193 (316)
T cd05620 120 RDLKLDNVMLDRDGHIKIADFGMCKENVFGDNR------ASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQ 193 (316)
T ss_pred cCCCHHHeEECCCCCEEeCccCCCeecccCCCc------eeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCC
Confidence 999999999999999999999998753211110 11235788999999999888889999999999999999743
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCCh
Q 008643 347 SGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKF 401 (558)
Q Consensus 347 ~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~~ 401 (558)
. ++...+...+ .+.+......+|..+..-++.++.. |+..||+-++
T Consensus 194 ~--Pf~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~li~~---~l~~dP~~R~ 239 (316)
T cd05620 194 S--PFHGDDEDEL----FESIRVDTPHYPRWITKESKDILEK---LFERDPTRRL 239 (316)
T ss_pred C--CCCCCCHHHH----HHHHHhCCCCCCCCCCHHHHHHHHH---HccCCHHHcC
Confidence 2 3333333322 2333334445565555555555544 5556665543
No 50
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.91 E-value=1.9e-24 Score=224.02 Aligned_cols=239 Identities=18% Similarity=0.138 Sum_probs=154.6
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|+||+||+|+.+.+|+.||||+.+...... ..+. ..+
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~------------------------------~~~------ 47 (323)
T cd05615 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQ-DDDV------------------------------ECT------ 47 (323)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHH------------------------------HHH------
Confidence 368999999999999998899999999976421100 0000 000
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHCCce
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLEFGLF 265 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~~Gi~ 265 (558)
..|.. ......+++.+.....+.......++||||++|++|.+...... ........+..+++.|+.|||+.|++
T Consensus 48 ~~e~~----~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~iv 123 (323)
T cd05615 48 MVEKR----VLALQDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGII 123 (323)
T ss_pred HHHHH----HHHhccCCCchhheeeEEecCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 11111 11122233333211112223455699999999999876543211 12334456778999999999999999
Q ss_pred ecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHh
Q 008643 266 HGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 266 H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~ 345 (558)
|+|+||+||+++.+|.++|+|||++......... .....+++.|+||++...+.++..+|+|++|+.+++++.+
T Consensus 124 HrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG 197 (323)
T cd05615 124 YRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVT------TRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAG 197 (323)
T ss_pred ccCCCHHHeEECCCCCEEEeccccccccCCCCcc------ccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhC
Confidence 9999999999999999999999998754322111 1123478899999999888888999999999999999974
Q ss_pred hcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCCh
Q 008643 346 SSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKF 401 (558)
Q Consensus 346 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~~ 401 (558)
.. ++...+...+.. .+.......|..++..++.++.- ++..||+-++
T Consensus 198 ~~--pf~~~~~~~~~~----~i~~~~~~~p~~~~~~~~~li~~---~l~~~p~~R~ 244 (323)
T cd05615 198 QP--PFDGEDEDELFQ----SIMEHNVSYPKSLSKEAVSICKG---LMTKHPSKRL 244 (323)
T ss_pred CC--CCCCCCHHHHHH----HHHhCCCCCCccCCHHHHHHHHH---HcccCHhhCC
Confidence 32 333333333322 23344555665555444444433 5556665443
No 51
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.91 E-value=1.7e-24 Score=241.49 Aligned_cols=218 Identities=17% Similarity=0.232 Sum_probs=161.4
Q ss_pred ccC-cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHh
Q 008643 104 KIS-SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLE 182 (558)
Q Consensus 104 ~~~-~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~ 182 (558)
+|+ .+.||.|.||.|+.++.+.+++.+|+|++... ..+++.- ...+.+
T Consensus 76 DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~---------eMlKr~~----------------------tA~F~E 124 (1317)
T KOG0612|consen 76 DFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKW---------EMLKRAE----------------------TACFRE 124 (1317)
T ss_pred hhHHHHHhcccccceeEEEEeeccccchhHHHhhHH---------HHhhchh----------------------HHHHHH
Confidence 344 47899999999999999999999999986431 1111100 001223
Q ss_pred hhcHHH--HHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHH
Q 008643 183 ELDYTL--EARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQL 259 (558)
Q Consensus 183 Eld~~~--Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~L 259 (558)
|-|..- -.+-+..+...|+++.++ |+||||++||+|-.+..... ...+.+++|...+..||.-+
T Consensus 125 ERDimv~~ns~Wiv~LhyAFQD~~~L-------------YlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldsl 191 (1317)
T KOG0612|consen 125 ERDIMVFGNSEWIVQLHYAFQDERYL-------------YLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSL 191 (1317)
T ss_pred HhHHHHcCCcHHHHHHHHHhcCccce-------------EEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHH
Confidence 333221 135567788889998887 99999999999876543222 34567789999999999999
Q ss_pred HHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-----CCCCCCCCccc
Q 008643 260 LEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-----GFLAKGTDVSP 334 (558)
Q Consensus 260 h~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-----g~~~~~~Di~~ 334 (558)
|+.|+||||+||.|||++..|+|+|.|||.+-.+..+..-. ....-|+|+|++|+++.. |.+++.+|+|+
T Consensus 192 H~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~-----s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWS 266 (1317)
T KOG0612|consen 192 HSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVR-----SSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWS 266 (1317)
T ss_pred HhccceeccCCcceeEecccCcEeeccchhHHhcCCCCcEE-----eccccCCCCccCHHHHHhhcCCccccCCccchhh
Confidence 99999999999999999999999999999999887543211 123458999999999873 77899999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHH-hcCCCCc
Q 008643 335 IIPALEAIWQNSSGKGLADFNFRSVTGQFNKLVY-NYRIRIP 375 (558)
Q Consensus 335 l~~~l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~lP 375 (558)
+|+.+|+|+- +-.||=...+.....+++. +..+.+|
T Consensus 267 lGV~~YEMly-----G~TPFYadslveTY~KIm~hk~~l~FP 303 (1317)
T KOG0612|consen 267 LGVFMYEMLY-----GETPFYADSLVETYGKIMNHKESLSFP 303 (1317)
T ss_pred hHHHHHHHHc-----CCCcchHHHHHHHHHHHhchhhhcCCC
Confidence 9999999985 3345645556666555553 2245555
No 52
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.91 E-value=9.4e-25 Score=230.03 Aligned_cols=198 Identities=17% Similarity=0.134 Sum_probs=135.6
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|+||.||+|+.+.+|+.||||+.+..... .. +....+..|+
T Consensus 6 ~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~-----------------------------~~~~~~~~E~-- 52 (363)
T cd05628 6 LKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADML--EK-----------------------------EQVGHIRAER-- 52 (363)
T ss_pred eEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHH--Hh-----------------------------hHHHHHHHHH--
Confidence 47899999999999999889999999998642100 00 0001111221
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHCCce
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLEFGLF 265 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~~Gi~ 265 (558)
. +...+.+...+..... .......++||||++|++|.+...... ........+..|++.||.|||+.||+
T Consensus 53 ----~----il~~~~~~~iv~~~~~-~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~giv 123 (363)
T cd05628 53 ----D----ILVEADSLWVVKMFYS-FQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFI 123 (363)
T ss_pred ----H----HHHhCCCCCcceEEEE-EecCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence 1 1122222222222222 222456699999999999877643221 12334456788999999999999999
Q ss_pred ecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHH-----------------------------HHHHHHhcCHHHH
Q 008643 266 HGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILID-----------------------------AVVHAVNEDYAEM 316 (558)
Q Consensus 266 H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~-----------------------------~~~~~~~~d~~~~ 316 (558)
|||+||+||+++.+|.++|+|||++..+....+..... .......|+..|+
T Consensus 124 HrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~ 203 (363)
T cd05628 124 HRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYI 203 (363)
T ss_pred ecCCCHHHeEECCCCCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCcccc
Confidence 99999999999999999999999998664322110000 0011235889999
Q ss_pred HHHHHHcCCCCCCCCcccHHHHHHHHHHhh
Q 008643 317 ANDFTRLGFLAKGTDVSPIIPALEAIWQNS 346 (558)
Q Consensus 317 a~~~~~~g~~~~~~Di~~l~~~l~~l~~~~ 346 (558)
||+++..+.++..+|+|++|+.+++++.+.
T Consensus 204 aPE~~~~~~~~~~~DvwSlGvil~ell~G~ 233 (363)
T cd05628 204 APEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233 (363)
T ss_pred CHHHHcCCCCCCchhhhhhHHHHHHHHhCC
Confidence 999998888889999999999999999743
No 53
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.91 E-value=5e-25 Score=228.42 Aligned_cols=236 Identities=17% Similarity=0.180 Sum_probs=151.9
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||+|+||+||+|+.+.+|+.||+|+.++..... ..+. .. +.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~-~~~~------------------------------~~------~~ 43 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA-KDEV------------------------------AH------TL 43 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhHH------------------------------HH------HH
Confidence 36899999999999998899999999986431100 0000 00 11
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHH-CCce
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLE-FGLF 265 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~-~Gi~ 265 (558)
.|.. ....+.+ +.+.-...+.......++||||++|++|.+...... ........+..|++.+|.|||+ .|++
T Consensus 44 ~e~~----~l~~~~h-p~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~iv 118 (325)
T cd05594 44 TENR----VLQNSRH-PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVV 118 (325)
T ss_pred HHHH----HHHhCCC-CCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEE
Confidence 1222 1222222 333222222333566799999999999865432221 1223334567899999999997 7999
Q ss_pred ecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHh
Q 008643 266 HGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 266 H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~ 345 (558)
|+|+||.||+++.+|.++|+|||++......... .....++..|+||+++..+..+..+|+|++|+.+++++.+
T Consensus 119 HrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG 192 (325)
T cd05594 119 YRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT------MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 192 (325)
T ss_pred ecCCCCCeEEECCCCCEEEecCCCCeecCCCCcc------cccccCCcccCCHHHHccCCCCCccccccccceeeeeccC
Confidence 9999999999999999999999998754322111 1123578899999999888888999999999999999874
Q ss_pred hcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 346 SSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 346 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
.. ++...+... +.+.+....+.+|..+..-++.++.. ++..||+-+
T Consensus 193 ~~--Pf~~~~~~~----~~~~i~~~~~~~p~~~~~~~~~li~~---~L~~dP~~R 238 (325)
T cd05594 193 RL--PFYNQDHEK----LFELILMEEIRFPRTLSPEAKSLLSG---LLKKDPKQR 238 (325)
T ss_pred CC--CCCCCCHHH----HHHHHhcCCCCCCCCCCHHHHHHHHH---HhhcCHHHh
Confidence 32 222223222 23333344555555554444554433 455566443
No 54
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.91 E-value=1.1e-24 Score=234.04 Aligned_cols=197 Identities=22% Similarity=0.263 Sum_probs=154.7
Q ss_pred hcccCcceeeeeeccEEEEEEEcCCCcEEEEEEecCC----ChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHH
Q 008643 102 FSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPG----IEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFG 177 (558)
Q Consensus 102 f~~~~~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~----~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~ 177 (558)
|.....+-+|+|+||.||+++++.+|+.||||..++. -.+...+++.+||.+.
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLn----------------------- 69 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLN----------------------- 69 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcC-----------------------
Confidence 4455568899999999999999999999999988763 3456677777777653
Q ss_pred HhhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHH--hcCCCCHHHHH--HHHHH
Q 008643 178 EKLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAI--KGAGIDVGGFL--TVGVS 253 (558)
Q Consensus 178 ~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~--~~~~~~~~~~~--~~~v~ 253 (558)
|+|++++.+.=...... .-+...+++||||.||+|...... ...|++...++ ...+.
T Consensus 70 ------------h~NIVk~f~iee~~~~~-------~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~ 130 (732)
T KOG4250|consen 70 ------------HPNIVKLFDIEETKFLG-------LVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLV 130 (732)
T ss_pred ------------chhhhhhcccCCccccC-------cccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHH
Confidence 88988886643322110 124566999999999999765322 23477766654 45688
Q ss_pred HHHHHHHHCCceecCCCCCCEEEec--CCC--eEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-CCCCC
Q 008643 254 AALRQLLEFGLFHGDPHPGNIFAMR--DGR--IAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-GFLAK 328 (558)
Q Consensus 254 ~~L~~Lh~~Gi~H~DlhPgNIlv~~--dg~--l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-g~~~~ 328 (558)
.|+.+||++||+|||+||+||++-. +|+ -||+|||.++.+++... +..+-|+.+|++|+++.. ++++.
T Consensus 131 ~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s~-------~~S~vGT~~YLhPel~E~q~~y~~ 203 (732)
T KOG4250|consen 131 SALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNSL-------FTSLVGTEEYLHPELYERQKKYTA 203 (732)
T ss_pred HHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCCe-------eeeecCchhhcChHHHhhccCcCc
Confidence 9999999999999999999999864 454 59999999999998762 234568999999999994 99999
Q ss_pred CCCcccHHHHHHHHHHhhc
Q 008643 329 GTDVSPIIPALEAIWQNSS 347 (558)
Q Consensus 329 ~~Di~~l~~~l~~l~~~~~ 347 (558)
.+|.|+||+++|+..++..
T Consensus 204 tVDLWS~GvtlY~caTG~l 222 (732)
T KOG4250|consen 204 TVDLWSFGVTLYECATGEL 222 (732)
T ss_pred eeehhhhhhHHHHHhccCC
Confidence 9999999999999998754
No 55
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.91 E-value=1.3e-24 Score=225.21 Aligned_cols=190 Identities=18% Similarity=0.186 Sum_probs=132.5
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||+|+||+||+|+.+.+|+.||||+.+......-.. ...+..|.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~-------------------------------~~~~~~e~--- 46 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKE-------------------------------QKHIMAER--- 46 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhH-------------------------------HHHHHHHH---
Confidence 35899999999999998899999999976431100000 00011111
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCC--HHHHHHHHHHHHHHHHHHCCce
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGID--VGGFLTVGVSAALRQLLEFGLF 265 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~--~~~~~~~~v~~~L~~Lh~~Gi~ 265 (558)
..+...+.+.+.+.+...+ ......+++|||++|++|.+.... ....+ ....+..|++.+|.|||+.|++
T Consensus 47 ------~~~l~~~~hp~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~lH~~giv 118 (325)
T cd05604 47 ------NVLLKNVKHPFLVGLHYSF-QTTEKLYFVLDFVNGGELFFHLQR-ERSFPEPRARFYAAEIASALGYLHSINIV 118 (325)
T ss_pred ------HHHHHhCCCCCCccEEEEE-ecCCEEEEEEcCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 0112223333323222222 335567999999999998654322 22233 3345778999999999999999
Q ss_pred ecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHh
Q 008643 266 HGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 266 H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~ 345 (558)
|+|+||+||+++.+|.++|+|||++......... .....++..|++|++...+..+..+|+|++|+.+++++.+
T Consensus 119 H~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G 192 (325)
T cd05604 119 YRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDT------TTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYG 192 (325)
T ss_pred ecCCCHHHeEECCCCCEEEeecCCcccCCCCCCC------cccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcC
Confidence 9999999999999999999999998754221111 1123578999999999888888999999999999999974
No 56
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.91 E-value=1.3e-24 Score=229.96 Aligned_cols=192 Identities=17% Similarity=0.173 Sum_probs=134.5
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|+||.||+|+.+.+|+.||+|+........ ..+ ...+.+|+
T Consensus 48 ~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~------------------------------~~~~~~e~-- 94 (370)
T cd05621 48 VKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIK-RSD------------------------------SAFFWEER-- 94 (370)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhh------------------------------HHHHHHHH--
Confidence 368999999999999998899999999875310000 000 00111111
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHCCcee
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGLFH 266 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi~H 266 (558)
.+...+.+...+.+... .......++||||++|++|.++.............+..+++.||.|||+.|++|
T Consensus 95 --------~i~~~~~hp~iv~~~~~-~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~IvH 165 (370)
T cd05621 95 --------DIMAFANSPWVVQLFCA-FQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIH 165 (370)
T ss_pred --------HHHHhCCCCCEeeEEEE-EEcCCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 12222223322222222 233456799999999999987654333233344567889999999999999999
Q ss_pred cCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc----CCCCCCCCcccHHHHHHHH
Q 008643 267 GDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL----GFLAKGTDVSPIIPALEAI 342 (558)
Q Consensus 267 ~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~----g~~~~~~Di~~l~~~l~~l 342 (558)
||+||+||+++.+|.++|+|||++..+....... .....+++.|+||+.+.. +.++..+|+|++|+.++++
T Consensus 166 rDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~-----~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyel 240 (370)
T cd05621 166 RDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVR-----CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEM 240 (370)
T ss_pred cCCCHHHEEECCCCCEEEEecccceecccCCcee-----cccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHH
Confidence 9999999999999999999999998775432110 123458899999999864 3467889999999999999
Q ss_pred HHh
Q 008643 343 WQN 345 (558)
Q Consensus 343 ~~~ 345 (558)
+.+
T Consensus 241 l~G 243 (370)
T cd05621 241 LVG 243 (370)
T ss_pred HhC
Confidence 974
No 57
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.91 E-value=6.9e-25 Score=214.34 Aligned_cols=205 Identities=19% Similarity=0.242 Sum_probs=156.7
Q ss_pred HHHHHHHHHhCCChHhhhcccCcceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhc
Q 008643 85 VAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQK 164 (558)
Q Consensus 85 ~~~~~ie~elg~~~~~~f~~~~~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~ 164 (558)
.-.+.-+..|.++++++|+-. +.+|.||||.||+|.++.+|+.||||-..-+
T Consensus 18 ~~~KLd~~sL~K~PEEVFDi~--~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-------------------------- 69 (502)
T KOG0574|consen 18 DGFKLDSSALNKPPEEVFDIV--GKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-------------------------- 69 (502)
T ss_pred cccccChhhhcCChHHHHHHH--HHhcCCcchHHHHHHHhccCcEEEEEecCcc--------------------------
Confidence 344555778899999998776 5799999999999999999999999965322
Q ss_pred cCCChHHHHHHHHHhhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCH
Q 008643 165 LGCNAELIVDEFGEKLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDV 244 (558)
Q Consensus 165 ~~~~~~~iv~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~ 244 (558)
.|+..++.|+ ++.+..| .+..+++++.+-.+ +..|+|||||..|+++|+...+...+..
T Consensus 70 --sDLQEIIKEI--SIMQQC~----S~yVVKYYGSYFK~-------------sDLWIVMEYCGAGSiSDI~R~R~K~L~E 128 (502)
T KOG0574|consen 70 --TDLQEIIKEI--SIMQQCK----SKYVVKYYGSYFKH-------------SDLWIVMEYCGAGSISDIMRARRKPLSE 128 (502)
T ss_pred --chHHHHHHHH--HHHHHcC----CchhhhhhhhhccC-------------CceEeehhhcCCCcHHHHHHHhcCCccH
Confidence 2333444433 2222222 45566666655443 4459999999999999998887776655
Q ss_pred HHH--HHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHH
Q 008643 245 GGF--LTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTR 322 (558)
Q Consensus 245 ~~~--~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~ 322 (558)
..+ +.+..+.||+|||...-+|||+|.||||++.+|..|+.|||.++++++.... ...+-|++-+|||+++.
T Consensus 129 ~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAK------RNTVIGTPFWMAPEVI~ 202 (502)
T KOG0574|consen 129 QEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAK------RNTVIGTPFWMAPEVIE 202 (502)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHh------hCccccCcccccHHHHH
Confidence 443 5566889999999999999999999999999999999999999999875432 13445899999999887
Q ss_pred cCCCCCCCCcccHHHHHHHHHH
Q 008643 323 LGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 323 ~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
---+...+|+|++|..--++-.
T Consensus 203 EIGY~~~ADIWSLGITaIEMAE 224 (502)
T KOG0574|consen 203 EIGYDTKADIWSLGITAIEMAE 224 (502)
T ss_pred HhccchhhhHhhhcchhhhhhc
Confidence 6445678999999987766665
No 58
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.91 E-value=1.3e-23 Score=217.58 Aligned_cols=238 Identities=18% Similarity=0.141 Sum_probs=150.1
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||+|+||+||+|+.+.+|+.||||+.+...... ..+. .....|.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~------------------------------~~~~~e~--- 46 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQ-DDDV------------------------------DCTMTEK--- 46 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhh-hhHH------------------------------HHHHHHH---
Confidence 35899999999999998889999999976431100 0000 0011111
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHCCcee
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLEFGLFH 266 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~~Gi~H 266 (558)
++.....+++.+....-+.......++||||++|++|.+...... ........+..+++.||.|||++|++|
T Consensus 47 -------~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH 119 (321)
T cd05591 47 -------RILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIY 119 (321)
T ss_pred -------HHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 111111223322211112223455699999999998865432211 122334557789999999999999999
Q ss_pred cCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHhh
Q 008643 267 GDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNS 346 (558)
Q Consensus 267 ~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~~ 346 (558)
+|+||.||+++.+|.++|+|||++......... .....++..|+||+.......++.+|+|++|+.+++++.+.
T Consensus 120 rDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~ 193 (321)
T cd05591 120 RDLKLDNILLDAEGHCKLADFGMCKEGILNGVT------TTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQ 193 (321)
T ss_pred cCCCHHHeEECCCCCEEEeecccceecccCCcc------ccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCC
Confidence 999999999999999999999998754322211 11235788999999998888888999999999999999743
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCCh
Q 008643 347 SGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKF 401 (558)
Q Consensus 347 ~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~~ 401 (558)
. ++...+...+... +.......|..+..-++.++.. ++..||+-++
T Consensus 194 ~--Pf~~~~~~~~~~~----i~~~~~~~p~~~~~~~~~ll~~---~L~~dp~~R~ 239 (321)
T cd05591 194 P--PFEADNEDDLFES----ILHDDVLYPVWLSKEAVSILKA---FMTKNPNKRL 239 (321)
T ss_pred C--CCCCCCHHHHHHH----HHcCCCCCCCCCCHHHHHHHHH---HhccCHHHcC
Confidence 2 3333333333322 3333344444433333444332 4555665443
No 59
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.91 E-value=5.2e-24 Score=223.42 Aligned_cols=246 Identities=20% Similarity=0.225 Sum_probs=183.0
Q ss_pred hCCChHhhhcccCcceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHH
Q 008643 94 LGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIV 173 (558)
Q Consensus 94 lg~~~~~~f~~~~~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv 173 (558)
+..+++.+|.++ ..||.||||.||.|++..+.+.||||.+.=.-...... +.
T Consensus 20 ~k~DPEklf~dL--rEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EK-----------------------Wq--- 71 (948)
T KOG0577|consen 20 FKDDPEKLFSDL--REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEK-----------------------WQ--- 71 (948)
T ss_pred ccCCHHHHHHHH--HHhcCCccceeEEeeccCccceeeeeeccccccccHHH-----------------------HH---
Confidence 345778888776 68999999999999999999999999764221111111 11
Q ss_pred HHHHHhhHhhhcHHH--HHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHH
Q 008643 174 DEFGEKLLEELDYTL--EARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLT 249 (558)
Q Consensus 174 ~e~~~~l~~Eld~~~--Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~ 249 (558)
-+..|+.|.+ .|+|...+.++|-.+ +..|||||||-| +-+|+....+.++... ..+.
T Consensus 72 -----DIlKEVrFL~~l~HPntieYkgCyLre-------------~TaWLVMEYClG-SAsDlleVhkKplqEvEIAAi~ 132 (948)
T KOG0577|consen 72 -----DILKEVRFLRQLRHPNTIEYKGCYLRE-------------HTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAIT 132 (948)
T ss_pred -----HHHHHHHHHHhccCCCcccccceeecc-------------chHHHHHHHHhc-cHHHHHHHHhccchHHHHHHHH
Confidence 2233333332 266666666655443 334899999976 6677777766665544 3467
Q ss_pred HHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHH---cCCC
Q 008643 250 VGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTR---LGFL 326 (558)
Q Consensus 250 ~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~---~g~~ 326 (558)
.|.+.||.|||+++.+|||+|.||||++..|.||+.|||.+....+.+ .+-|++.+|||+++- -|.+
T Consensus 133 ~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAn----------sFvGTPywMAPEVILAMDEGqY 202 (948)
T KOG0577|consen 133 HGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPAN----------SFVGTPYWMAPEVILAMDEGQY 202 (948)
T ss_pred HHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCchh----------cccCCccccchhHheecccccc
Confidence 789999999999999999999999999999999999999998877743 335899999998874 4889
Q ss_pred CCCCCcccHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCc-hhHHHHHHHHHHHHhhhhhcCCCCChhHh
Q 008643 327 AKGTDVSPIIPALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIP-ERFSLVIRSLLTQEGICFTLKPDFKFLEV 404 (558)
Q Consensus 327 ~~~~Di~~l~~~l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP-~~~~~~~rsl~~legi~~~LdP~~~~~~~ 404 (558)
+.++|+|++|.+.-++-... .| -||+.. +..++.+....+..++ ++++.-++.++.. |++--|.-+...+
T Consensus 203 dgkvDvWSLGITCIELAERk--PP--lFnMNA-MSALYHIAQNesPtLqs~eWS~~F~~Fvd~---CLqKipqeRptse 273 (948)
T KOG0577|consen 203 DGKVDVWSLGITCIELAERK--PP--LFNMNA-MSALYHIAQNESPTLQSNEWSDYFRNFVDS---CLQKIPQERPTSE 273 (948)
T ss_pred CCccceeeccchhhhhhhcC--CC--ccCchH-HHHHHHHHhcCCCCCCCchhHHHHHHHHHH---HHhhCcccCCcHH
Confidence 99999999998887776632 22 355554 4567778877777776 5688889999877 9998898876543
No 60
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.91 E-value=2.2e-24 Score=225.54 Aligned_cols=189 Identities=19% Similarity=0.153 Sum_probs=132.0
Q ss_pred cceeeeeeccEEEEEEEcCCC-cEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhc
Q 008643 107 SQTIAAASLGQVYRATLRETG-EDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELD 185 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G-~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld 185 (558)
.+.||+|+||.||+|+++.++ ..||||+....... .. +....+
T Consensus 35 ~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~--~~-----------------------------~~~~~~----- 78 (340)
T PTZ00426 35 IRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKII--KQ-----------------------------KQVDHV----- 78 (340)
T ss_pred EEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhh--hh-----------------------------hhHHHH-----
Confidence 478999999999999875554 68999987532100 00 000011
Q ss_pred HHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHCCc
Q 008643 186 YTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 186 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~~Gi 264 (558)
..|.. +...+.+.+.+.+...+ ...+..+++|||++|++|.+...... ........+..|++.+|.|||+.|+
T Consensus 79 -~~E~~----~l~~l~hp~Iv~~~~~~-~~~~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i 152 (340)
T PTZ00426 79 -FSERK----ILNYINHPFCVNLYGSF-KDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNI 152 (340)
T ss_pred -HHHHH----HHHhCCCCCCcceEEEE-EeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 11221 22222232222222222 22445699999999999977543221 1223334577899999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
+|||+||+||+++.+|.++|+|||++..+..... ...+++.|+||+.......+..+|+|++|+.+++++.
T Consensus 153 vHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~~---------~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~ 223 (340)
T PTZ00426 153 VYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRTY---------TLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILV 223 (340)
T ss_pred EccCCCHHHEEECCCCCEEEecCCCCeecCCCcc---------eecCChhhcCHHHHhCCCCCccccccchhhHHHHHhc
Confidence 9999999999999999999999999987654321 2357899999999988778889999999999999997
Q ss_pred hh
Q 008643 345 NS 346 (558)
Q Consensus 345 ~~ 346 (558)
+.
T Consensus 224 G~ 225 (340)
T PTZ00426 224 GC 225 (340)
T ss_pred CC
Confidence 43
No 61
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.91 E-value=1.1e-24 Score=229.31 Aligned_cols=198 Identities=18% Similarity=0.151 Sum_probs=134.5
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|+||.||+|+.+.+|+.||||+.+..... .. +....+.+|++
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~-----------------------------~~~~~~~~E~~- 53 (364)
T cd05599 6 IKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEML--EK-----------------------------EQVAHVRAERD- 53 (364)
T ss_pred EEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhh--hh-----------------------------hHHHHHHHHHH-
Confidence 47899999999999999889999999997532000 00 00011112221
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHCCce
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLEFGLF 265 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~~Gi~ 265 (558)
+...+.+...+.+.. +.......+++|||++|++|.+...... ........+..|++.||.|||+.|++
T Consensus 54 ---------il~~l~h~~iv~~~~-~~~~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~iv 123 (364)
T cd05599 54 ---------ILAEADNPWVVKLYY-SFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYI 123 (364)
T ss_pred ---------HHHhCCCCCCcceEE-EEEcCCeEEEEECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 111222222222211 2223455699999999999977643221 12334456788999999999999999
Q ss_pred ecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHH--------------------------------HHHHHHhcCH
Q 008643 266 HGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILID--------------------------------AVVHAVNEDY 313 (558)
Q Consensus 266 H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~--------------------------------~~~~~~~~d~ 313 (558)
|+|+||+||+++.+|.++++|||++..+.......... .......|++
T Consensus 124 H~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 203 (364)
T cd05599 124 HRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTP 203 (364)
T ss_pred eccCCHHHeEECCCCCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCc
Confidence 99999999999999999999999987654321110000 0001134788
Q ss_pred HHHHHHHHHcCCCCCCCCcccHHHHHHHHHHhh
Q 008643 314 AEMANDFTRLGFLAKGTDVSPIIPALEAIWQNS 346 (558)
Q Consensus 314 ~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~~ 346 (558)
.|+||++...+.++..+|+|++|+.+++++.+.
T Consensus 204 ~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~ 236 (364)
T cd05599 204 DYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGY 236 (364)
T ss_pred cccCHHHHcCCCCCCeeeeecchhHHHHhhcCC
Confidence 999999998888889999999999999999743
No 62
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.90 E-value=2e-24 Score=225.82 Aligned_cols=238 Identities=16% Similarity=0.172 Sum_probs=178.3
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||.|+||.++..+.+.++..+++|.++-.-...-.+ +...+|+++.
T Consensus 10 ~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r--------------------------------~~A~~E~~li 57 (426)
T KOG0589|consen 10 RQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPER--------------------------------RSAIQEMDLL 57 (426)
T ss_pred hhcCccccchhhhhhhccCCceEEEEEEeccccCchhh--------------------------------HHHHHHHHHH
Confidence 67999999999999999999999999875321110000 0112222221
Q ss_pred --HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHH--HHHHHHHHHHHHHHHC
Q 008643 188 --LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGG--FLTVGVSAALRQLLEF 262 (558)
Q Consensus 188 --~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~--~~~~~v~~~L~~Lh~~ 262 (558)
..|+|++.+.+.|..+.. -.+|+|+||+||++.+.....+ ...+..+ .++.|++.++.|||+.
T Consensus 58 s~~~hP~iv~y~ds~~~~~~------------~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~ 125 (426)
T KOG0589|consen 58 SKLLHPNIVEYKDSFEEDGQ------------LLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN 125 (426)
T ss_pred HhccCCCeeeeccchhcCCc------------eEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh
Confidence 125555555555544333 2599999999999998765444 2233333 4778999999999999
Q ss_pred CceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHH
Q 008643 263 GLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAI 342 (558)
Q Consensus 263 Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l 342 (558)
+|+|||+|+.|||++.++.|++.|||+++.+.++.. +...+-|++.||.|+++..-.+..++|+|++|+.++++
T Consensus 126 ~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~------~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm 199 (426)
T KOG0589|consen 126 RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDS------LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEM 199 (426)
T ss_pred hhhcccchhhhhhccccCceeecchhhhhhcCCchh------hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHH
Confidence 999999999999999999999999999999988651 22445689999999999999999999999999999999
Q ss_pred HHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCChhH
Q 008643 343 WQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKFLE 403 (558)
Q Consensus 343 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~~~~ 403 (558)
... ...+...|...+..++. ...-..+|..++.-+|.++.- +++.+|+.+..+
T Consensus 200 ~~l--k~aF~a~~m~~Li~ki~---~~~~~Plp~~ys~el~~lv~~---~l~~~P~~RPsa 252 (426)
T KOG0589|consen 200 CTL--KPAFKASNMSELILKIN---RGLYSPLPSMYSSELRSLVKS---MLRKNPEHRPSA 252 (426)
T ss_pred Hhc--ccccCccchHHHHHHHh---hccCCCCCccccHHHHHHHHH---HhhcCCccCCCH
Confidence 973 33555666666655544 444567899999889988887 888999877443
No 63
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.90 E-value=2.2e-24 Score=223.51 Aligned_cols=236 Identities=18% Similarity=0.232 Sum_probs=152.5
Q ss_pred ceeeeeeccEEEEEEEc---CCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhh
Q 008643 108 QTIAAASLGQVYRATLR---ETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEEL 184 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~---~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~El 184 (558)
+.||+|+||.||+|+.. .+|+.||||+.+..... .+... ...+..|+
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~---~~~~~---------------------------~~~~~~E~ 51 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIV---RNQKD---------------------------TAHTKAER 51 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHH---hhhhh---------------------------HHHHHHHH
Confidence 57999999999999863 46889999987642100 00000 00011111
Q ss_pred cHHH--HHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC-CCCHHHHHHHHHHHHHHHHHH
Q 008643 185 DYTL--EARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA-GIDVGGFLTVGVSAALRQLLE 261 (558)
Q Consensus 185 d~~~--Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~-~~~~~~~~~~~v~~~L~~Lh~ 261 (558)
.... .|+|+.++...+.. .+..+++|||++|++|.+....... ..+....+..|++.+|.|||+
T Consensus 52 ~il~~l~hp~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 118 (323)
T cd05584 52 NILEAVKHPFIVDLIYAFQT-------------GGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQ 118 (323)
T ss_pred HHHHhCCCCchhceeeEEec-------------CCeEEEEEeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1100 13444443333322 3456999999999998765332211 122334567899999999999
Q ss_pred CCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHH
Q 008643 262 FGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEA 341 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~ 341 (558)
.|++|+|+||+||+++.+|.++|+|||++......... .+...++..|+||+++.....+..+|+|++|+.+++
T Consensus 119 ~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 192 (323)
T cd05584 119 QGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTV------THTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYD 192 (323)
T ss_pred CCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCc------ccccCCCccccChhhccCCCCCCcceecccHHHHHH
Confidence 99999999999999999999999999998754322211 122457889999999988778889999999999999
Q ss_pred HHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCCh
Q 008643 342 IWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKF 401 (558)
Q Consensus 342 l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~~ 401 (558)
++.+.. ++...+...... .+......+|+.+..-++.++.. |+..||+-++
T Consensus 193 ll~G~~--pf~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~li~~---~l~~~p~~R~ 243 (323)
T cd05584 193 MLTGAP--PFTAENRKKTID----KILKGKLNLPPYLTPEARDLLKK---LLKRNPSSRL 243 (323)
T ss_pred HhcCCC--CCCCCCHHHHHH----HHHcCCCCCCCCCCHHHHHHHHH---HcccCHhHcC
Confidence 997432 333333322222 22334556666665555666544 6666776554
No 64
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=99.90 E-value=1.5e-24 Score=217.88 Aligned_cols=215 Identities=18% Similarity=0.182 Sum_probs=138.8
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.++||.|++|.|..|..+.+|+.||||-+..-....+ ..++..+|+.+
T Consensus 27 ~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~--------------------------------~akRtlRElkl 74 (359)
T KOG0660|consen 27 IEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQI--------------------------------DAKRTLRELKL 74 (359)
T ss_pred cccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchH--------------------------------HHHHHHHHHHH
Confidence 5899999999999999999999999996531111100 11222333321
Q ss_pred HH--HHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHCC
Q 008643 187 TL--EARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLEFG 263 (558)
Q Consensus 187 ~~--Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~~G 263 (558)
.+ .|+|+..+...+.. .. .+--...|+|+|+++ .+|..+....+ ...+-.+++..|++.||+|+|+.|
T Consensus 75 Lr~~~HeNIi~l~di~~p-------~~-~~~f~DvYiV~elMe-tDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAn 145 (359)
T KOG0660|consen 75 LRHLRHENIIGLLDIFRP-------PS-RDKFNDVYLVFELME-TDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSAN 145 (359)
T ss_pred HHHhcCCCcceEEeeccc-------cc-ccccceeEEehhHHh-hHHHHHHHcCccccHHHHHHHHHHHHHhcchhhccc
Confidence 11 14444443333222 00 111345699999994 45555433333 233445678899999999999999
Q ss_pred ceecCCCCCCEEEecCCCeEEeecCcccccChhhHHH-HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHH
Q 008643 264 LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQI-LIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAI 342 (558)
Q Consensus 264 i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~-l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l 342 (558)
++|||+||+|++++.+..+|++|||+++..++..... +++.+ ..-+...++-++...-++..+|+|+.||.+.++
T Consensus 146 ViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYV----aTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEm 221 (359)
T KOG0660|consen 146 VIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEYV----ATRWYRAPELLLNSSEYTKAIDIWSVGCILAEM 221 (359)
T ss_pred ccccccchhheeeccCCCEEeccccceeeccccCcccchhcce----eeeeecCHHHHhccccccchhhhhhhhHHHHHH
Confidence 9999999999999999999999999999986532221 12222 122333334445566788999999999999999
Q ss_pred HHhhcCCCCCCCCHHHHHHHHHHHHHhcC
Q 008643 343 WQNSSGKGLADFNFRSVTGQFNKLVYNYR 371 (558)
Q Consensus 343 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 371 (558)
+++. + -|...+-+.++.-++.--+
T Consensus 222 L~gk---p--lFpG~d~v~Ql~lI~~~lG 245 (359)
T KOG0660|consen 222 LTGK---P--LFPGKDYVHQLQLILELLG 245 (359)
T ss_pred HcCC---C--CCCCCchHHHHHHHHHhcC
Confidence 9742 2 2334444566665554444
No 65
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.90 E-value=1.5e-24 Score=219.88 Aligned_cols=238 Identities=16% Similarity=0.151 Sum_probs=151.6
Q ss_pred eeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHHHH
Q 008643 110 IAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYTLE 189 (558)
Q Consensus 110 Ig~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~~E 189 (558)
||+|+||+||+|..+.+|+.||||+......... .. ... +..|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~-~~------------------------------~~~------~~~E 43 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKR-KG------------------------------YEG------AMVE 43 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhh-HH------------------------------HHH------HHHH
Confidence 6899999999999988999999998754211000 00 000 1122
Q ss_pred HHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHh---cCCCCHH--HHHHHHHHHHHHHHHHCCc
Q 008643 190 ARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIK---GAGIDVG--GFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 190 a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~---~~~~~~~--~~~~~~v~~~L~~Lh~~Gi 264 (558)
...+ ..+ +++.+.....+....+..+++|||++|++|.+..... ....+.. ..+..|++.++.|||+.|+
T Consensus 44 ~~il----~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i 118 (280)
T cd05608 44 KRIL----AKV-HSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRI 118 (280)
T ss_pred HHHH----HhC-CCCcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 2222 222 2333322222223345679999999999997643211 1123333 3467899999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
+|+|+||.||+++.+|.++++|||++..+...... .....++..|++|+....+..+..+|+|++|..++++++
T Consensus 119 ~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~------~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~ 192 (280)
T cd05608 119 IYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSK------TKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIA 192 (280)
T ss_pred ccCCCCHHHEEECCCCCEEEeeCccceecCCCCcc------ccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHh
Confidence 99999999999999999999999999876543221 012346788999999998888889999999999999997
Q ss_pred hhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 345 NSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 345 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
+..+ +...+.......+...+...+..+|+.++..++.++.. |+..||+-+
T Consensus 193 g~~p--f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~---~l~~~P~~R 243 (280)
T cd05608 193 ARGP--FRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEA---LLAKDPEKR 243 (280)
T ss_pred CCCC--CCCCCcchhHHHHHHhhcccCCCCcccCCHHHHHHHHH---HhcCCHHHh
Confidence 5332 22111111112222223334445555555555555543 556666544
No 66
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.90 E-value=2.2e-24 Score=226.33 Aligned_cols=234 Identities=16% Similarity=0.201 Sum_probs=148.1
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|+||.||+|+++.+|+.||||+.......... ..+.+|+..
T Consensus 79 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~---------------------------------~~~~~E~~~ 125 (353)
T PLN00034 79 VNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVR---------------------------------RQICREIEI 125 (353)
T ss_pred hhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHH---------------------------------HHHHHHHHH
Confidence 46899999999999999889999999998654322111 111122211
Q ss_pred HH--HHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHCCc
Q 008643 187 TL--EARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 187 ~~--Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi 264 (558)
.. .|+|+.++.+.+.+ .+..+++|||++|++|.+... ........+..+++.+|.|||+.|+
T Consensus 126 l~~l~h~~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~---~~~~~~~~i~~qi~~aL~~LH~~~i 189 (353)
T PLN00034 126 LRDVNHPNVVKCHDMFDH-------------NGEIQVLLEFMDGGSLEGTHI---ADEQFLADVARQILSGIAYLHRRHI 189 (353)
T ss_pred HHhCCCCCcceeeeEecc-------------CCeEEEEEecCCCCccccccc---CCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 10 14444444433322 345589999999998865311 1112223477899999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-----CCCCCCCCcccHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-----GFLAKGTDVSPIIPAL 339 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-----g~~~~~~Di~~l~~~l 339 (558)
+|+|+||.||+++.++.++|+|||++..+...... .....++..|++|+.+.. .+.+..+|+|++|+.+
T Consensus 190 vHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil 263 (353)
T PLN00034 190 VHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDP------CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSI 263 (353)
T ss_pred eecCCCHHHEEEcCCCCEEEcccccceeccccccc------ccccccCccccCccccccccccCcCCCcchhHHHHHHHH
Confidence 99999999999999999999999998876532211 012347888999998743 2334578999999999
Q ss_pred HHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 340 EAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 340 ~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
++++.+...... -...+....+..+....+...|..+..-++.++.. |+..||+-+
T Consensus 264 ~el~~g~~pf~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~---~l~~~P~~R 319 (353)
T PLN00034 264 LEFYLGRFPFGV--GRQGDWASLMCAICMSQPPEAPATASREFRHFISC---CLQREPAKR 319 (353)
T ss_pred HHHHhCCCCCCC--CCCccHHHHHHHHhccCCCCCCCccCHHHHHHHHH---HccCChhhC
Confidence 999875432221 11112222222233333444444444444444433 555555444
No 67
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.90 E-value=2.2e-24 Score=228.80 Aligned_cols=197 Identities=18% Similarity=0.163 Sum_probs=133.5
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||+|+||+||+|+.+.+|+.||||+.+..... . .+....+..|++
T Consensus 7 ~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~--~-----------------------------~~~~~~~~~E~~-- 53 (381)
T cd05626 7 KTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVL--N-----------------------------RNQVAHVKAERD-- 53 (381)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhh--h-----------------------------hHHHHHHHHHHH--
Confidence 6899999999999999999999999987642100 0 000011122221
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHCCcee
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLEFGLFH 266 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~~Gi~H 266 (558)
+...+.+...+.+...+ ......++||||++|++|.++..... ........+..|++.+|.|||..||+|
T Consensus 54 --------il~~l~h~~iv~l~~~~-~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givH 124 (381)
T cd05626 54 --------ILAEADNEWVVKLYYSF-QDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIH 124 (381)
T ss_pred --------HHHhcCCCCeeeeEEEE-ecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 11222232222222222 23456799999999999877543221 122334567789999999999999999
Q ss_pred cCCCCCCEEEecCCCeEEeecCcccccChhhHHH---------------------------------H--------HHHH
Q 008643 267 GDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQI---------------------------------L--------IDAV 305 (558)
Q Consensus 267 ~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~---------------------------------l--------~~~~ 305 (558)
||+||+||+++.+|+++|+|||++..+....... + ....
T Consensus 125 rDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (381)
T cd05626 125 RDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCL 204 (381)
T ss_pred cCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccc
Confidence 9999999999999999999999976442110000 0 0000
Q ss_pred HHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHhh
Q 008643 306 VHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNS 346 (558)
Q Consensus 306 ~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~~ 346 (558)
.....|+..|+||+.+....++..+|+|++|+.+++++.+.
T Consensus 205 ~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~ 245 (381)
T cd05626 205 AHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQ 245 (381)
T ss_pred cccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCC
Confidence 11235889999999998777888999999999999999753
No 68
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.90 E-value=8.2e-25 Score=230.14 Aligned_cols=198 Identities=17% Similarity=0.141 Sum_probs=135.6
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|+||+||+|+.+.+|+.||||+.+..... .. +....+..|
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~-----------------------------~~~~~~~~e--- 51 (360)
T cd05627 6 LKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADML--EK-----------------------------EQVAHIRAE--- 51 (360)
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHh--hh-----------------------------hhHHHHHHH---
Confidence 37899999999999999889999999998642100 00 000111112
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHCCce
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLEFGLF 265 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~~Gi~ 265 (558)
... ...+.+...+.... ........++||||++|++|.+...... ........+..|++.+|.|||+.|++
T Consensus 52 ---~~~----l~~l~~~~iv~~~~-~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~giv 123 (360)
T cd05627 52 ---RDI----LVEADGAWVVKMFY-SFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFI 123 (360)
T ss_pred ---HHH----HHhCCCCCEeeEEE-EEEcCCEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 221 12222222222222 2233456799999999999877643221 22334456788999999999999999
Q ss_pred ecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHH-----------------------------HHHHHHhcCHHHH
Q 008643 266 HGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILID-----------------------------AVVHAVNEDYAEM 316 (558)
Q Consensus 266 H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~-----------------------------~~~~~~~~d~~~~ 316 (558)
|+|+||+||+++.+|.++|+|||++..+.......... .......|+..|+
T Consensus 124 HrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 203 (360)
T cd05627 124 HRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYI 203 (360)
T ss_pred ccCCCHHHEEECCCCCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCcccc
Confidence 99999999999999999999999987664321110000 0001235788999
Q ss_pred HHHHHHcCCCCCCCCcccHHHHHHHHHHhh
Q 008643 317 ANDFTRLGFLAKGTDVSPIIPALEAIWQNS 346 (558)
Q Consensus 317 a~~~~~~g~~~~~~Di~~l~~~l~~l~~~~ 346 (558)
||+++....++..+|+|++|+.+++++.+.
T Consensus 204 APE~~~~~~~~~~~DiwSlGvilyel~tG~ 233 (360)
T cd05627 204 APEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233 (360)
T ss_pred CHHHHcCCCCCCcceeccccceeeecccCC
Confidence 999998888889999999999999999743
No 69
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.90 E-value=1.4e-23 Score=207.22 Aligned_cols=237 Identities=16% Similarity=0.167 Sum_probs=177.7
Q ss_pred cccC-cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhH
Q 008643 103 SKIS-SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLL 181 (558)
Q Consensus 103 ~~~~-~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~ 181 (558)
.+|+ .+.+|+|.||.|-.++-+.+|+-+|+|+.+..+.- .+| |++..+-
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKevii--akd----------------------------EVAHTlT 217 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVII--AKD----------------------------EVAHTLT 217 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhhee--ehH----------------------------Hhhhhhh
Confidence 3455 57899999999999999999999999998875421 111 1111111
Q ss_pred h-hhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCH-HHHhcCCCCHHHHHHHHHHHHHHHH
Q 008643 182 E-ELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDP-QAIKGAGIDVGGFLTVGVSAALRQL 259 (558)
Q Consensus 182 ~-Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~-~~~~~~~~~~~~~~~~~v~~~L~~L 259 (558)
+ .+=....|+.+..+...|+.+..+ ++||||..||.|.-. ...+-...+..+++-..|.++|.||
T Consensus 218 E~RVL~~~~HPFLt~LKYsFQt~drl-------------CFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YL 284 (516)
T KOG0690|consen 218 ENRVLQNCRHPFLTSLKYSFQTQDRL-------------CFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYL 284 (516)
T ss_pred HHHHHHhccCcHHHHhhhhhccCceE-------------EEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhh
Confidence 0 000112366677777777776555 999999999998643 3334446778889999999999999
Q ss_pred HHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHH
Q 008643 260 LEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPAL 339 (558)
Q Consensus 260 h~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l 339 (558)
|+.+|+.||+|.+|++++.||++||.|||+++.--.... ....+||+++|+||+++.-.-+...+|.|.+|+.+
T Consensus 285 Hs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~------t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVM 358 (516)
T KOG0690|consen 285 HSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGD------TTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVM 358 (516)
T ss_pred hhCCeeeeechhhhheeccCCceEeeecccchhcccccc------eeccccCChhhcCchhhccccccceeehhhhhHHH
Confidence 999999999999999999999999999999985322111 12457899999999999988888999999999999
Q ss_pred HHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCC
Q 008643 340 EAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKP 397 (558)
Q Consensus 340 ~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP 397 (558)
|+|+.+..+.. +-+ -+.+++++.-..+++|..++.-+|++++= .+.-||
T Consensus 359 YEMmCGRLPFy--n~d----h~kLFeLIl~ed~kFPr~ls~eAktLLsG---LL~kdP 407 (516)
T KOG0690|consen 359 YEMMCGRLPFY--NKD----HEKLFELILMEDLKFPRTLSPEAKTLLSG---LLKKDP 407 (516)
T ss_pred HHHHhccCccc--ccc----hhHHHHHHHhhhccCCccCCHHHHHHHHH---HhhcCh
Confidence 99997544322 111 24566777777889999999999998753 455667
No 70
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.90 E-value=3.7e-24 Score=223.53 Aligned_cols=196 Identities=19% Similarity=0.199 Sum_probs=139.1
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||.|++|+||+|+.+.+|+.||||+.+...... ..+ ...+..|++.
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~------------------------------~~~~~~e~~~ 54 (350)
T cd05573 6 IKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIK-RNQ------------------------------IAHVRAERDI 54 (350)
T ss_pred EEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhh-ccH------------------------------HHHHHHHHHH
Confidence 368999999999999998899999999976421100 000 0011112111
Q ss_pred HH--HHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHh-cCCCCHHHHHHHHHHHHHHHHHHCC
Q 008643 187 TL--EARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIK-GAGIDVGGFLTVGVSAALRQLLEFG 263 (558)
Q Consensus 187 ~~--Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~-~~~~~~~~~~~~~v~~~L~~Lh~~G 263 (558)
.. .|+|+.++...+.+.. ..++||||++|++|.+..... .........+..|++.||.|||..|
T Consensus 55 l~~~~~~~i~~~~~~~~~~~-------------~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~g 121 (350)
T cd05573 55 LADADSPWIVKLYYSFQDEE-------------HLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLG 121 (350)
T ss_pred HHhcCCCCccchhhheecCC-------------eEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 11 1556666655554433 449999999999997764332 1123334557789999999999999
Q ss_pred ceecCCCCCCEEEecCCCeEEeecCcccccChhhHHH-----------------------HHHHHHHHHhcCHHHHHHHH
Q 008643 264 LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQI-----------------------LIDAVVHAVNEDYAEMANDF 320 (558)
Q Consensus 264 i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~-----------------------l~~~~~~~~~~d~~~~a~~~ 320 (558)
++|+|+||+||+++.+|.++|+|||++..+....... ..........++..|+||++
T Consensus 122 iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~ 201 (350)
T cd05573 122 FIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEV 201 (350)
T ss_pred eeccCCCHHHeEECCCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHH
Confidence 9999999999999999999999999998765433000 00000112347889999999
Q ss_pred HHcCCCCCCCCcccHHHHHHHHHHhh
Q 008643 321 TRLGFLAKGTDVSPIIPALEAIWQNS 346 (558)
Q Consensus 321 ~~~g~~~~~~Di~~l~~~l~~l~~~~ 346 (558)
+..+.+++.+|+|++|+.+++++.+.
T Consensus 202 ~~~~~~~~~~DiwSlG~il~ell~g~ 227 (350)
T cd05573 202 LRGTPYGLECDWWSLGVILYEMLYGF 227 (350)
T ss_pred HcCCCCCCceeeEecchhhhhhccCC
Confidence 99888899999999999999999753
No 71
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.90 E-value=2.8e-24 Score=227.35 Aligned_cols=192 Identities=17% Similarity=0.192 Sum_probs=134.0
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|+||.||+|+.+.+|+.||+|+....... -..+ ...+.+|.
T Consensus 48 ~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~-~~~~------------------------------~~~~~~e~-- 94 (371)
T cd05622 48 VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI-KRSD------------------------------SAFFWEER-- 94 (371)
T ss_pred EEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhh-hhHH------------------------------HHHHHHHH--
Confidence 47899999999999999989999999987531000 0000 00111111
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHCCcee
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGLFH 266 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi~H 266 (558)
.....+.+...+.+...+ ......+++|||++|++|.++.............+..+++.+|.|||+.|++|
T Consensus 95 --------~i~~~~~hp~iv~~~~~~-~~~~~~~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH 165 (371)
T cd05622 95 --------DIMAFANSPWVVQLFYAF-QDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH 165 (371)
T ss_pred --------HHHHhCCCCCCCeEEEEE-EcCCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCEEe
Confidence 122222233223222222 23456799999999999987654332233334557789999999999999999
Q ss_pred cCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc----CCCCCCCCcccHHHHHHHH
Q 008643 267 GDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL----GFLAKGTDVSPIIPALEAI 342 (558)
Q Consensus 267 ~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~----g~~~~~~Di~~l~~~l~~l 342 (558)
+|+||+||+++.+|+++|+|||++..+....... .....+++.|+||+++.. +.++..+|+|++|+.++++
T Consensus 166 rDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~-----~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyel 240 (371)
T cd05622 166 RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR-----CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 240 (371)
T ss_pred CCCCHHHEEECCCCCEEEEeCCceeEcCcCCccc-----ccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHH
Confidence 9999999999999999999999998775432110 112357899999999874 3467889999999999999
Q ss_pred HHh
Q 008643 343 WQN 345 (558)
Q Consensus 343 ~~~ 345 (558)
+.+
T Consensus 241 l~G 243 (371)
T cd05622 241 LVG 243 (371)
T ss_pred HhC
Confidence 974
No 72
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.90 E-value=1.5e-24 Score=229.47 Aligned_cols=198 Identities=19% Similarity=0.194 Sum_probs=133.3
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|+||.||+|+.+.+|+.||||+.+..... . .+....+.+|++
T Consensus 6 ~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~---~----------------------------~~~~~~~~~E~~- 53 (376)
T cd05598 6 IKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVL---M----------------------------RNQAAHVKAERD- 53 (376)
T ss_pred EEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHH---h----------------------------hhhHHHHHHHHH-
Confidence 47899999999999999889999999987532000 0 000011112221
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC-CCCHHHHHHHHHHHHHHHHHHCCce
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA-GIDVGGFLTVGVSAALRQLLEFGLF 265 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~-~~~~~~~~~~~v~~~L~~Lh~~Gi~ 265 (558)
+...+.+...+.+... ....+..+++|||++|++|.++...... ..+....+..|++.||.|||+.||+
T Consensus 54 ---------il~~l~h~~iv~~~~~-~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~iv 123 (376)
T cd05598 54 ---------ILAEADNEWVVKLYYS-FQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFI 123 (376)
T ss_pred ---------HHHhCCCCCcceEEEE-EEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 1112222222222222 2335567999999999999876432211 2233455678999999999999999
Q ss_pred ecCCCCCCEEEecCCCeEEeecCcccccChhh----------------------------------HHHH---HHHHHHH
Q 008643 266 HGDPHPGNIFAMRDGRIAYVDFGNVAELSQQN----------------------------------KQIL---IDAVVHA 308 (558)
Q Consensus 266 H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~----------------------------------~~~l---~~~~~~~ 308 (558)
|||+||+||+++.+|.++|+|||++..+.... +... .......
T Consensus 124 HrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (376)
T cd05598 124 HRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHS 203 (376)
T ss_pred eCCCCHHHEEECCCCCEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccc
Confidence 99999999999999999999999975331000 0000 0000112
Q ss_pred HhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHhh
Q 008643 309 VNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNS 346 (558)
Q Consensus 309 ~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~~ 346 (558)
..|++.|+||+++.....+..+|+|++|+.+++++.+.
T Consensus 204 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~ 241 (376)
T cd05598 204 LVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQ 241 (376)
T ss_pred cCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCC
Confidence 35788999999998888889999999999999998743
No 73
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.90 E-value=1.6e-23 Score=218.59 Aligned_cols=207 Identities=15% Similarity=0.189 Sum_probs=143.6
Q ss_pred HHHhCCChHhhhcccC-cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCCh
Q 008643 91 EEELGRPLEAVFSKIS-SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNA 169 (558)
Q Consensus 91 e~elg~~~~~~f~~~~-~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~ 169 (558)
++|++....++...|. .++||+|+||+||+|....+|+.||||+.+.........
T Consensus 3 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~------------------------ 58 (343)
T cd07878 3 RQELNKTVWEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHA------------------------ 58 (343)
T ss_pred HHHHhHHHhhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHH------------------------
Confidence 3445544444444454 479999999999999998899999999876532111000
Q ss_pred HHHHHHHHHhhHhhhcHH--HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHH
Q 008643 170 ELIVDEFGEKLLEELDYT--LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGF 247 (558)
Q Consensus 170 ~~iv~e~~~~l~~Eld~~--~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~ 247 (558)
..+.+|+... ..|+|+.++.+.+...... ......+++||++ |+++.++.............
T Consensus 59 --------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-------~~~~~~~~~~~~~-~~~l~~~~~~~~l~~~~~~~ 122 (343)
T cd07878 59 --------RRTYRELRLLKHMKHENVIGLLDVFTPATSI-------ENFNEVYLVTNLM-GADLNNIVKCQKLSDEHVQF 122 (343)
T ss_pred --------HHHHHHHHHHHhcCCCchhhhhhhhcccccc-------cccCcEEEEeecC-CCCHHHHHhcCCCCHHHHHH
Confidence 0011121111 1267888877766433211 1234458999988 66776543322223334456
Q ss_pred HHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-CCC
Q 008643 248 LTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-GFL 326 (558)
Q Consensus 248 ~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-g~~ 326 (558)
+..|++.||.|||++|++|+|+||+||+++.+|.++|+|||++........ ...++..|++|+++.. ...
T Consensus 123 i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---------~~~~t~~y~aPE~~~~~~~~ 193 (343)
T cd07878 123 LIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADDEMT---------GYVATRWYRAPEIMLNWMHY 193 (343)
T ss_pred HHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecCCCcC---------CccccccccCchHhcCCccC
Confidence 788999999999999999999999999999999999999999987654321 1235778899998865 456
Q ss_pred CCCCCcccHHHHHHHHHHhh
Q 008643 327 AKGTDVSPIIPALEAIWQNS 346 (558)
Q Consensus 327 ~~~~Di~~l~~~l~~l~~~~ 346 (558)
+..+|+|++|+.+++++.+.
T Consensus 194 ~~~~DiwslG~il~el~~g~ 213 (343)
T cd07878 194 NQTVDIWSVGCIMAELLKGK 213 (343)
T ss_pred CchhhhHhHHHHHHHHHHCC
Confidence 78899999999999999753
No 74
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.90 E-value=3.8e-24 Score=219.20 Aligned_cols=209 Identities=14% Similarity=0.142 Sum_probs=140.0
Q ss_pred cceeeeeeccEEEEEEEcC----------------CCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChH
Q 008643 107 SQTIAAASLGQVYRATLRE----------------TGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAE 170 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~----------------~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~ 170 (558)
.+.||+|+||.||+|++.. ++..||||+.++........
T Consensus 10 ~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~------------------------- 64 (304)
T cd05096 10 KEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARN------------------------- 64 (304)
T ss_pred eeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHH-------------------------
Confidence 4689999999999998632 34479999988754321111
Q ss_pred HHHHHHHHhhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC----------
Q 008643 171 LIVDEFGEKLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA---------- 240 (558)
Q Consensus 171 ~iv~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~---------- 240 (558)
+|.+|...+. .+.+.+.+.+...+ ......+++|||++|++|.++......
T Consensus 65 --------------~~~~E~~~l~----~l~h~niv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 125 (304)
T cd05096 65 --------------DFLKEVKILS----RLKDPNIIRLLGVC-VDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDA 125 (304)
T ss_pred --------------HHHHHHHHHh----hcCCCCeeEEEEEE-ecCCceEEEEecCCCCcHHHHHHhccccccccccccc
Confidence 1122222222 22333323222222 224567999999999999776432211
Q ss_pred ----------CCCHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHh
Q 008643 241 ----------GIDVGGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVN 310 (558)
Q Consensus 241 ----------~~~~~~~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~ 310 (558)
.......+..+++.|+.|||+.|++|+|+||+||+++.+|.++|+|||++..+....... ......
T Consensus 126 ~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~----~~~~~~ 201 (304)
T cd05096 126 VPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYR----IQGRAV 201 (304)
T ss_pred cccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEEcCCccEEECCCccceecccCceeE----ecCcCC
Confidence 011123477899999999999999999999999999999999999999998664432110 001122
Q ss_pred cCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHhhcCCCCCCCCHHHHHHHH
Q 008643 311 EDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNSSGKGLADFNFRSVTGQF 363 (558)
Q Consensus 311 ~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~~~~~~~~~~~~~~l~~~l 363 (558)
++..|++|+....+..++.+|+|++|..+++++......++...+...+....
T Consensus 202 ~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~ 254 (304)
T cd05096 202 LPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENA 254 (304)
T ss_pred CCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHH
Confidence 35678999999888899999999999999999875444455555544444433
No 75
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.90 E-value=2.3e-23 Score=216.40 Aligned_cols=245 Identities=16% Similarity=0.172 Sum_probs=154.1
Q ss_pred cceeeeeeccEEEEEEEc---CCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhh
Q 008643 107 SQTIAAASLGQVYRATLR---ETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEE 183 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~---~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~E 183 (558)
.+.||+|+||.||+|+.. .+|+.||+|+.+...... +. ...+.+..|
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~---~~---------------------------~~~~~~~~e 54 (332)
T cd05614 5 LKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQ---KA---------------------------KTVEHTRTE 54 (332)
T ss_pred EEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhh---hh---------------------------hHHHHHHHH
Confidence 368999999999999863 478999999975421000 00 000011111
Q ss_pred hcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHC
Q 008643 184 LDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLEF 262 (558)
Q Consensus 184 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~~ 262 (558)
. .....+.+++.+.....+.......+++|||++|++|.+...... ........+..+++.+|.|||+.
T Consensus 55 ------~----~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 124 (332)
T cd05614 55 ------R----NVLEHVRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKL 124 (332)
T ss_pred ------H----HHHHhccCCCCcccEEEEEecCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 1 222233344444333223334556789999999999876543221 12233345778999999999999
Q ss_pred CceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcccHHHHHHH
Q 008643 263 GLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLG-FLAKGTDVSPIIPALEA 341 (558)
Q Consensus 263 Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g-~~~~~~Di~~l~~~l~~ 341 (558)
|++|||+||+|||++.+|.++|+|||++..+....... .....++..|++|+.+... ..+..+|+|++|+.+++
T Consensus 125 ~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~e 199 (332)
T cd05614 125 GIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKER-----TYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFE 199 (332)
T ss_pred CcEecCCCHHHeEECCCCCEEEeeCcCCccccccCCCc-----cccccCCccccCHHHhcCCCCCCCccccccchhhhhh
Confidence 99999999999999999999999999988654322111 1123578899999998743 36778999999999999
Q ss_pred HHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCCh
Q 008643 342 IWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKF 401 (558)
Q Consensus 342 l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~~ 401 (558)
++++... +...+.......+...+.+....+|+.+...++.++.. |+..||+-++
T Consensus 200 lltg~~p--f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~---~l~~dp~~R~ 254 (332)
T cd05614 200 LLTGASP--FTLEGERNTQSEVSRRILKCDPPFPSFIGPEAQDLLHK---LLRKDPKKRL 254 (332)
T ss_pred hhcCCCC--CCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHH---HcCCCHHHcC
Confidence 9975332 21111111122233333344445555555555665544 5666665554
No 76
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.90 E-value=2.9e-24 Score=223.30 Aligned_cols=188 Identities=23% Similarity=0.190 Sum_probs=134.7
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|+||+||+|+.+.+|+.||||+.+...... .. ....+..|+
T Consensus 6 ~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~----~~---------------------------~~~~~~~e~-- 52 (333)
T cd05600 6 LTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFK----LN---------------------------EVRHVLTER-- 52 (333)
T ss_pred EEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhh----hh---------------------------HHHHHHHHH--
Confidence 468999999999999998889999999976431100 00 000111121
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHCCce
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLEFGLF 265 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~~Gi~ 265 (558)
. ....+.+...+.+... .......+++|||++|++|.++..... ........+..+++.+|.|||+.|++
T Consensus 53 ----~----~l~~~~h~~iv~~~~~-~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iv 123 (333)
T cd05600 53 ----D----ILTTTKSEWLVKLLYA-FQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYI 123 (333)
T ss_pred ----H----HHHhCCCCCCccEEEE-EEcCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 1 2222222222222222 223456799999999999987643221 12333455778999999999999999
Q ss_pred ecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHh
Q 008643 266 HGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 266 H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~ 345 (558)
|+|+||.||+++.+|.++|+|||++...... .....+++.|++|+++..+.++..+|+|++|+.+++++.+
T Consensus 124 H~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g 194 (333)
T cd05600 124 HRDLKPENFLIDASGHIKLTDFGLSKGIVTY---------ANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCG 194 (333)
T ss_pred ccCCCHHHEEECCCCCEEEEeCcCCcccccc---------cCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhC
Confidence 9999999999999999999999999866541 1123478889999999888888999999999999999874
No 77
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.90 E-value=2.3e-23 Score=215.92 Aligned_cols=239 Identities=18% Similarity=0.129 Sum_probs=153.9
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|+||.||+|+.+.+|+.||||+.++..... ..+. .. +
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-~~~~------------------------------~~------~ 47 (324)
T cd05587 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQ-DDDV------------------------------EC------T 47 (324)
T ss_pred EEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHH------------------------------HH------H
Confidence 368999999999999998889999999986531100 0000 00 1
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHCCce
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLEFGLF 265 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~~Gi~ 265 (558)
..|... .....+++.+.....+.......++||||++|++|.+...... ........+..|++.||.|||+.|++
T Consensus 48 ~~e~~~----l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iv 123 (324)
T cd05587 48 MVEKRV----LALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGII 123 (324)
T ss_pred HHHHHH----HHhcCCCCceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 112222 2222333333222222233556799999999999876543221 12333455778999999999999999
Q ss_pred ecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHh
Q 008643 266 HGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 266 H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~ 345 (558)
|+|+||+||+++.+|.++|+|||++......... .....++..|++|+++..+..+..+|+|++|+.+++++++
T Consensus 124 H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG 197 (324)
T cd05587 124 YRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKT------TRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAG 197 (324)
T ss_pred ecCCCHHHeEEcCCCCEEEeecCcceecCCCCCc------eeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhC
Confidence 9999999999999999999999998653211111 1123478899999999888888899999999999999974
Q ss_pred hcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCCh
Q 008643 346 SSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKF 401 (558)
Q Consensus 346 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~~ 401 (558)
.. ++...+...+... +.+....+|..+..-++.++.. ++..||.-++
T Consensus 198 ~~--pf~~~~~~~~~~~----i~~~~~~~~~~~~~~~~~li~~---~l~~~P~~R~ 244 (324)
T cd05587 198 QP--PFDGEDEDELFQS----IMEHNVSYPKSLSKEAVSICKG---LLTKHPAKRL 244 (324)
T ss_pred CC--CCCCCCHHHHHHH----HHcCCCCCCCCCCHHHHHHHHH---HhhcCHHHcC
Confidence 32 3333333333332 3344445555444444444433 5556665443
No 78
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.90 E-value=2.4e-24 Score=228.07 Aligned_cols=198 Identities=17% Similarity=0.131 Sum_probs=132.8
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|+||.||+|+.+.+|+.||||+...... ... +....+..|+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~-----------------------------~~~~~~~~E~-- 52 (377)
T cd05629 6 VKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEM--FKK-----------------------------DQLAHVKAER-- 52 (377)
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHH--HHh-----------------------------HHHHHHHHHH--
Confidence 3789999999999999989999999998753200 000 0000111121
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHCCce
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLEFGLF 265 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~~Gi~ 265 (558)
. +...+.+...+.+-.. .......++||||++|++|.+...... ...+....+..|++.+|.|||+.|++
T Consensus 53 ----~----il~~l~hp~iv~~~~~-~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~giv 123 (377)
T cd05629 53 ----D----VLAESDSPWVVSLYYS-FQDAQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFI 123 (377)
T ss_pred ----H----HHHhCCCCCcceEEEE-EEcCCeeEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 1 1222223222222222 223455799999999999976543211 12233455788999999999999999
Q ss_pred ecCCCCCCEEEecCCCeEEeecCcccccChhhHHHH-----------------------------------HH------H
Q 008643 266 HGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQIL-----------------------------------ID------A 304 (558)
Q Consensus 266 H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l-----------------------------------~~------~ 304 (558)
|||+||+||+++.+|.++++|||++..+........ .. .
T Consensus 124 HrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (377)
T cd05629 124 HRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRL 203 (377)
T ss_pred ccCCCHHHEEECCCCCEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccc
Confidence 999999999999999999999999864322110000 00 0
Q ss_pred HHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHhh
Q 008643 305 VVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNS 346 (558)
Q Consensus 305 ~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~~ 346 (558)
......|++.|+||+++....++..+|+|++|+.+++++.+.
T Consensus 204 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~ 245 (377)
T cd05629 204 MAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGW 245 (377)
T ss_pred cccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCC
Confidence 000134788999999998877888999999999999999743
No 79
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.90 E-value=5.3e-24 Score=220.21 Aligned_cols=234 Identities=18% Similarity=0.168 Sum_probs=150.9
Q ss_pred eeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH-
Q 008643 109 TIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT- 187 (558)
Q Consensus 109 pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~- 187 (558)
.||.|+||.||+|+++.+|+.||||+.+...... ..+. ..+..|....
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~------------------------------~~~~~e~~il~ 50 (318)
T cd05570 2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQ-DDDV------------------------------ECTMTEKRVLA 50 (318)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhh-hhHH------------------------------HHHHHHHHHHH
Confidence 5899999999999998889999999976431100 0000 0001111000
Q ss_pred --HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHh-cCCCCHHHHHHHHHHHHHHHHHHCCc
Q 008643 188 --LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIK-GAGIDVGGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 188 --~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~-~~~~~~~~~~~~~v~~~L~~Lh~~Gi 264 (558)
..|+|+.++...+ ......+++|||++|++|.+..... .........+..+++.+|.|||+.|+
T Consensus 51 ~~~~h~~i~~~~~~~-------------~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i 117 (318)
T cd05570 51 LAGKHPFLTQLHSCF-------------QTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGI 117 (318)
T ss_pred hccCCCCccceeeEE-------------EcCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 0133333333222 2244569999999999987643222 11223334577899999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
+|+|+||.||+++.+|.++|+|||++......... .....+++.|++|+++..+..+..+|+|++|+.+++++.
T Consensus 118 vH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~ 191 (318)
T cd05570 118 IYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVT------TSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLA 191 (318)
T ss_pred EccCCCHHHeEECCCCcEEecccCCCeecCcCCCc------ccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhh
Confidence 99999999999999999999999998653221111 012347889999999988888899999999999999997
Q ss_pred hhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCCh
Q 008643 345 NSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKF 401 (558)
Q Consensus 345 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~~ 401 (558)
+.. ++...+...+ ...+......+|..+...++.++.. |+..||+-++
T Consensus 192 G~~--pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~li~~---~l~~dP~~R~ 239 (318)
T cd05570 192 GQS--PFEGDDEDEL----FQSILEDEVRYPRWLSKEAKSILKS---FLTKNPEKRL 239 (318)
T ss_pred CCC--CCCCCCHHHH----HHHHHcCCCCCCCcCCHHHHHHHHH---HccCCHHHcC
Confidence 432 3333333332 2233344445555554445555543 5566665543
No 80
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.90 E-value=2.5e-24 Score=228.26 Aligned_cols=198 Identities=18% Similarity=0.190 Sum_probs=133.1
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|+||+||+|+.+.+|+.||||+.+..... . .+....+..|+
T Consensus 6 ~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~--~-----------------------------~~~~~~~~~E~-- 52 (382)
T cd05625 6 IKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVL--L-----------------------------RNQVAHVKAER-- 52 (382)
T ss_pred EEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhh--h-----------------------------HHHHHHHHHHH--
Confidence 37899999999999999889999999987532100 0 00001111222
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHCCce
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLEFGLF 265 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~~Gi~ 265 (558)
. +...+.+...+.+...+ ......++||||++|++|.+...... ...+....+..|++.+|.|||+.||+
T Consensus 53 ----~----il~~~~h~~iv~~~~~~-~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~iv 123 (382)
T cd05625 53 ----D----ILAEADNEWVVRLYYSF-QDKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFI 123 (382)
T ss_pred ----H----HHHhCCCCcCCeEEEEE-EeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 1 22222232222222222 22455699999999999876543221 12334456778999999999999999
Q ss_pred ecCCCCCCEEEecCCCeEEeecCcccccChhh--------------------------------------HHH---HHHH
Q 008643 266 HGDPHPGNIFAMRDGRIAYVDFGNVAELSQQN--------------------------------------KQI---LIDA 304 (558)
Q Consensus 266 H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~--------------------------------------~~~---l~~~ 304 (558)
|||+||+|||++.+|.++|+|||++..+.... +.. ....
T Consensus 124 HrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (382)
T cd05625 124 HRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRC 203 (382)
T ss_pred cCCCCHHHEEECCCCCEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccc
Confidence 99999999999999999999999975432100 000 0000
Q ss_pred HHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHhh
Q 008643 305 VVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNS 346 (558)
Q Consensus 305 ~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~~ 346 (558)
......|++.|+||+++....++..+|+|++|+.+++++.+.
T Consensus 204 ~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~ 245 (382)
T cd05625 204 LAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQ 245 (382)
T ss_pred cccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCC
Confidence 011235788999999998777888999999999999999753
No 81
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.90 E-value=1.2e-24 Score=227.41 Aligned_cols=216 Identities=19% Similarity=0.219 Sum_probs=164.6
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+=+|+|+-|.||+|++ .++.||||..+ +.-..|+..||.+.
T Consensus 130 eWlGSGaQGAVF~Grl--~netVAVKKV~----elkETdIKHLRkLk--------------------------------- 170 (904)
T KOG4721|consen 130 EWLGSGAQGAVFLGRL--HNETVAVKKVR----ELKETDIKHLRKLK--------------------------------- 170 (904)
T ss_pred hhhccCcccceeeeec--cCceehhHHHh----hhhhhhHHHHHhcc---------------------------------
Confidence 5689999999999999 48999999644 44567777777654
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHH--HHHHHHHHHHHHHHCCce
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGF--LTVGVSAALRQLLEFGLF 265 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~--~~~~v~~~L~~Lh~~Gi~ 265 (558)
|+||..|.+.+...|.+ +|+||||.-|.|..+.+..+ .+.+..+ +..+|+.|+.|||.+.|+
T Consensus 171 --H~NII~FkGVCtqsPcy-------------CIiMEfCa~GqL~~VLka~~-~itp~llv~Wsk~IA~GM~YLH~hKII 234 (904)
T KOG4721|consen 171 --HPNIITFKGVCTQSPCY-------------CIIMEFCAQGQLYEVLKAGR-PITPSLLVDWSKGIAGGMNYLHLHKII 234 (904)
T ss_pred --CcceeeEeeeecCCcee-------------EEeeeccccccHHHHHhccC-ccCHHHHHHHHHHhhhhhHHHHHhhHh
Confidence 89999998888777766 89999999998876543221 2444433 678999999999999999
Q ss_pred ecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHh
Q 008643 266 HGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 266 H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~ 345 (558)
|||+|.-||||+.+..|||+|||.++.+++.... ..++|+..+|||++++...++.++|||+||+.|++|+++
T Consensus 235 HRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STk-------MSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~ 307 (904)
T KOG4721|consen 235 HRDLKSPNILISYDDVVKISDFGTSKELSDKSTK-------MSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTG 307 (904)
T ss_pred hhccCCCceEeeccceEEeccccchHhhhhhhhh-------hhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhc
Confidence 9999999999999999999999999888764221 235689999999999999999999999999999999985
Q ss_pred hcCCCCCCCCHHHHHHHHHHHHH--hcCCCCchhHHHHHHHHHH
Q 008643 346 SSGKGLADFNFRSVTGQFNKLVY--NYRIRIPERFSLVIRSLLT 387 (558)
Q Consensus 346 ~~~~~~~~~~~~~l~~~l~~~~~--~~~~~lP~~~~~~~rsl~~ 387 (558)
- .++.+.+-..++--+-.-.. -.|-.+|..|.+++|....
T Consensus 308 E--iPYkdVdssAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~ 349 (904)
T KOG4721|consen 308 E--IPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWN 349 (904)
T ss_pred C--CCccccchheeEEeccCCcccccCcccCchHHHHHHHHHHh
Confidence 2 34444443322211111111 1244577888888887443
No 82
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.90 E-value=5.4e-24 Score=220.12 Aligned_cols=237 Identities=16% Similarity=0.160 Sum_probs=151.2
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||+|+||.||+|+.+.+|+.||||+.++..... ..+. .....|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~------------------------------~~~~~e---- 45 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLM-DDDV------------------------------ECTMVE---- 45 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-cchH------------------------------HHHHHH----
Confidence 36899999999999998889999999987532100 0000 000111
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHh-cCCCCHHHHHHHHHHHHHHHHHHCCcee
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIK-GAGIDVGGFLTVGVSAALRQLLEFGLFH 266 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~-~~~~~~~~~~~~~v~~~L~~Lh~~Gi~H 266 (558)
... +...+.+...+.+...+ ......+++|||++|++|.+..... .........+..|++.|+.|||+.|++|
T Consensus 46 --~~~---l~~~~~hp~iv~~~~~~-~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH 119 (316)
T cd05619 46 --KRV---LSLAWEHPFLTHLYCTF-QTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVY 119 (316)
T ss_pred --HHH---HHhccCCCcCcceEEEE-EeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEe
Confidence 111 11111222222222222 2245568999999999997654321 1233344567889999999999999999
Q ss_pred cCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHhh
Q 008643 267 GDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNS 346 (558)
Q Consensus 267 ~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~~ 346 (558)
+|+||.||+++.+|.++++|||++......... .....++..|++|++.....++..+|+|++|+.+++++.+.
T Consensus 120 rdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~ 193 (316)
T cd05619 120 RDLKLDNILLDTDGHIKIADFGMCKENMLGDAK------TCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQ 193 (316)
T ss_pred CCCCHHHEEECCCCCEEEccCCcceECCCCCCc------eeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCC
Confidence 999999999999999999999998753221111 01234788999999998888889999999999999999743
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 347 SGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 347 ~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
. ++...+...+... +.......|..+...++.++.. ++..||+-+
T Consensus 194 ~--pf~~~~~~~~~~~----i~~~~~~~~~~~~~~~~~li~~---~l~~~P~~R 238 (316)
T cd05619 194 S--PFHGHDEEELFQS----IRMDNPCYPRWLTREAKDILVK---LFVREPERR 238 (316)
T ss_pred C--CCCCCCHHHHHHH----HHhCCCCCCccCCHHHHHHHHH---HhccCHhhc
Confidence 2 3333343333322 2233334555555555555433 445555444
No 83
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.90 E-value=2.4e-24 Score=227.02 Aligned_cols=185 Identities=21% Similarity=0.258 Sum_probs=142.8
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCCh------hhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIE------PIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLL 181 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~------~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~ 181 (558)
+.||.|.||+||+|+.+.+|+.+|+|++..... +.+.+++.+|+.+.
T Consensus 41 ~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~--------------------------- 93 (382)
T KOG0032|consen 41 RELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLS--------------------------- 93 (382)
T ss_pred hhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhcc---------------------------
Confidence 789999999999999999999999998864322 23444444444332
Q ss_pred hhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 008643 182 EELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLE 261 (558)
Q Consensus 182 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~ 261 (558)
. +.+.|.++.+|.. ....++|||+++|+.|.+..............+..|++.+++|||+
T Consensus 94 ----------------~---hpniv~l~~~~e~-~~~~~lvmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~ 153 (382)
T KOG0032|consen 94 ----------------G---HPNIVQLKDAFED-PDSVYLVMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHS 153 (382)
T ss_pred ----------------C---CCCEEEEEEEEEc-CCeEEEEEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHh
Confidence 0 3344444444443 4566999999999999886543313333445678899999999999
Q ss_pred CCceecCCCCCCEEEecC----CCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHH
Q 008643 262 FGLFHGDPHPGNIFAMRD----GRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIP 337 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~d----g~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~ 337 (558)
.|++|||+||+|+|+... +.++++|||++..+....+ .+.++|++.|+||+......+++.+|+|++|+
T Consensus 154 ~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~-------~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gv 226 (382)
T KOG0032|consen 154 LGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGER-------LHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGV 226 (382)
T ss_pred CCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCce-------EeeecCCccccCchhhcCCCCCcccchhHHHH
Confidence 999999999999999643 5899999999998887322 34567999999999999888999999999999
Q ss_pred HHHHHHHhh
Q 008643 338 ALEAIWQNS 346 (558)
Q Consensus 338 ~l~~l~~~~ 346 (558)
.+|-++.++
T Consensus 227 i~yiLL~G~ 235 (382)
T KOG0032|consen 227 ILYILLSGV 235 (382)
T ss_pred HHHHHhhCC
Confidence 999998743
No 84
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=99.90 E-value=6.2e-24 Score=213.75 Aligned_cols=195 Identities=19% Similarity=0.245 Sum_probs=134.3
Q ss_pred hhhcccCcceeeeeeccEEEEEEEcCCCcEEEEEEecCC-----ChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHH
Q 008643 100 AVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPG-----IEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVD 174 (558)
Q Consensus 100 ~~f~~~~~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~-----~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~ 174 (558)
+.|+.+ +.||.|+||.||+|+.+.+|+.||+|.+|-. +.....+++.+++.+.
T Consensus 11 ~~~~~~--eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~-------------------- 68 (323)
T KOG0594|consen 11 FDYEKV--EKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLS-------------------- 68 (323)
T ss_pred HHHHHH--HHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhC--------------------
Confidence 334444 4599999999999999999999999998743 3333344444444432
Q ss_pred HHHHhhHhhhcHHHHHHH-HHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc---CCCCH--HHHH
Q 008643 175 EFGEKLLEELDYTLEARN-MEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG---AGIDV--GGFL 248 (558)
Q Consensus 175 e~~~~l~~Eld~~~Ea~n-~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~---~~~~~--~~~~ 248 (558)
|+| ++++.+.+..... ....+..++|+||++ .+|.++..... .+.+. .+.+
T Consensus 69 ---------------~~~~iv~L~dv~~~~~~-------~~~~~~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~ 125 (323)
T KOG0594|consen 69 ---------------HANHIVRLHDVIHTSNN-------HRGIGKLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSF 125 (323)
T ss_pred ---------------CCcceEEEEeeeeeccc-------ccccceEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHH
Confidence 333 3333333322221 011236689999997 35554433322 35554 4668
Q ss_pred HHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCC
Q 008643 249 TVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLG-FLA 327 (558)
Q Consensus 249 ~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g-~~~ 327 (558)
..|++.|+.|||++||+|||+||.||+++++|.+|++|||+++...-..+.. ..-+ .+--|-+||++-.. .++
T Consensus 126 m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~y-t~ev-----vTlWYRaPEvLlGs~~Ys 199 (323)
T KOG0594|consen 126 MRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMRTY-TPEV-----VTLWYRAPEVLLGSTSYS 199 (323)
T ss_pred HHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHHhcCCcccc-cccE-----EEeeccCHHHhcCCCcCC
Confidence 8999999999999999999999999999999999999999999766333321 1111 12224566765443 578
Q ss_pred CCCCcccHHHHHHHHHHh
Q 008643 328 KGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 328 ~~~Di~~l~~~l~~l~~~ 345 (558)
+.+|+|++|+.+.+++.+
T Consensus 200 ~~vDiWs~GcIfaEm~~~ 217 (323)
T KOG0594|consen 200 TSVDIWSLGCIFAEMFTR 217 (323)
T ss_pred CCcchHhHHHHHHHHHhC
Confidence 899999999999999984
No 85
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.89 E-value=3.1e-24 Score=207.59 Aligned_cols=261 Identities=17% Similarity=0.212 Sum_probs=184.2
Q ss_pred hhhcccC-cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHH
Q 008643 100 AVFSKIS-SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGE 178 (558)
Q Consensus 100 ~~f~~~~-~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~ 178 (558)
+.|..++ .+.+|.|..+.|-++..+.+|.++|+|++.-..... ..+. ..++.+
T Consensus 14 ~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~-------------------------~~e~-~~~~~E 67 (411)
T KOG0599|consen 14 GFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTE-------------------------SGET-PYEMRE 67 (411)
T ss_pred hHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEeccccc-------------------------CCcc-HHHHHH
Confidence 4555666 568999999999999999999999999875322110 0111 334444
Q ss_pred hhHhhhcHHHH---HHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHh-cCCCCHHHHHHHHHHH
Q 008643 179 KLLEELDYTLE---ARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIK-GAGIDVGGFLTVGVSA 254 (558)
Q Consensus 179 ~l~~Eld~~~E---a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~-~~~~~~~~~~~~~v~~ 254 (558)
...+|++..+. |+++..+.+.+..+ +-.++|.|.++-|.|.|+.... ..+....+.+++|+..
T Consensus 68 aT~~Ev~ILRqv~GHP~II~l~D~yes~-------------sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfe 134 (411)
T KOG0599|consen 68 ATRQEISILRQVMGHPYIIDLQDVYESD-------------AFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFE 134 (411)
T ss_pred HHHHHHHHHHHhcCCCcEEEeeeeccCc-------------chhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHH
Confidence 44555543221 34444443333333 3348999999999999875432 2244556789999999
Q ss_pred HHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCC------CCC
Q 008643 255 ALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGF------LAK 328 (558)
Q Consensus 255 ~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~------~~~ 328 (558)
++.|||..+|+|||+||+|||++++-+++|.|||+++++.+..+. .-+||++.|+||+.++... ++.
T Consensus 135 gVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~GekL-------relCGTPgYLAPEtikC~m~e~~pGYs~ 207 (411)
T KOG0599|consen 135 GVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPGEKL-------RELCGTPGYLAPETIKCSMYENHPGYSK 207 (411)
T ss_pred HHHHHHHhhhhhcccChhheeeccccceEEeccceeeccCCchhH-------HHhcCCCcccChhheeeecccCCCCccc
Confidence 999999999999999999999999999999999999999987664 2358999999999987543 345
Q ss_pred CCCcccHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHh--cCCCCch--hHHHHHHHHHHHHhhhhhcCCCCChhHh
Q 008643 329 GTDVSPIIPALEAIWQNSSGKGLADFNFRSVTGQFNKLVYN--YRIRIPE--RFSLVIRSLLTQEGICFTLKPDFKFLEV 404 (558)
Q Consensus 329 ~~Di~~l~~~l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~lP~--~~~~~~rsl~~legi~~~LdP~~~~~~~ 404 (558)
.+|.|+.|..++.++.+. .+|=... .-.+.+++.+ |.|+-|. +++.-.|.+++. +++.||.-++...
T Consensus 208 EVD~Wa~GVImyTLLaGc-----pPFwHRk-QmlMLR~ImeGkyqF~speWadis~~~KdLIsr---lLqVdp~~Ritak 278 (411)
T KOG0599|consen 208 EVDEWACGVIMYTLLAGC-----PPFWHRK-QMLMLRMIMEGKYQFRSPEWADISATVKDLISR---LLQVDPTKRITAK 278 (411)
T ss_pred hhhHHHHHHHHHHHHcCC-----CchhHHH-HHHHHHHHHhcccccCCcchhhccccHHHHHHH---HHeeCchhcccHH
Confidence 689999999999998743 3431211 1223344444 5566664 466678888877 8899998887654
Q ss_pred ---hhHHHHHHhhc
Q 008643 405 ---AYPYVAKRLLT 415 (558)
Q Consensus 405 ---a~p~v~~~ll~ 415 (558)
+.||....+..
T Consensus 279 e~LaHpff~q~~~~ 292 (411)
T KOG0599|consen 279 EALAHPFFIQIAQQ 292 (411)
T ss_pred HHhcChHHHHHHHh
Confidence 67777655544
No 86
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.89 E-value=2.2e-23 Score=211.85 Aligned_cols=239 Identities=18% Similarity=0.175 Sum_probs=155.6
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||+|+||+||+|....+|+.||||+.+........ .+..+.
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-------------------------------------~~~~~~ 48 (285)
T cd05605 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRK-------------------------------------GEAMAL 48 (285)
T ss_pred EEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhh-------------------------------------hHHHHH
Confidence 6799999999999999889999999987643211000 011112
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCH--HHHHHHHHHHHHHHHHHCCc
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDV--GGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~--~~~~~~~v~~~L~~Lh~~Gi 264 (558)
+|...+ ..+.+...+.+...+ ......+++|||++|++|.+...... ...+. ...+..|++.++.|||+.|+
T Consensus 49 ~E~~~l----~~l~h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 123 (285)
T cd05605 49 NEKQIL----EKVNSRFVVSLAYAY-ETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERI 123 (285)
T ss_pred HHHHHH----HhcCCCCEeeeeeee-cCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 222222 222232222222222 22345799999999999976543222 22333 34467899999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
+|+|+||.||+++.++.++++|||++..+...... ....++..|++|++...+..+..+|+|++|..+++++.
T Consensus 124 vH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~ 196 (285)
T cd05605 124 VYRDLKPENILLDDYGHIRISDLGLAVEIPEGETI-------RGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIE 196 (285)
T ss_pred EecCCCHHHEEECCCCCEEEeeCCCceecCCCCcc-------ccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHH
Confidence 99999999999999999999999998876433211 11236778999999988888888999999999999997
Q ss_pred hhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 345 NSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 345 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
+.. ++..-+.......+...+...+...|+.+...++.++.. |+..||+-+
T Consensus 197 g~~--pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~---~l~~~P~~R 247 (285)
T cd05605 197 GKS--PFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSICRQ---LLTKDPGFR 247 (285)
T ss_pred CCC--CCCCCchhhHHHHHHHHhhhcccccCcccCHHHHHHHHH---HccCCHHHh
Confidence 432 222222222223344444444555555555555666544 556666443
No 87
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.89 E-value=6.5e-24 Score=224.48 Aligned_cols=192 Identities=16% Similarity=0.184 Sum_probs=133.1
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|+||.||+|+.+.+|+.||||+.+...... ..+ ...+.+|
T Consensus 48 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~------------------------------~~~~~~e--- 93 (370)
T cd05596 48 IKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIK-RSD------------------------------SAFFWEE--- 93 (370)
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhh------------------------------HHHHHHH---
Confidence 478999999999999998899999999975320000 000 0001111
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHCCcee
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGLFH 266 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi~H 266 (558)
. .......+...+.+.. +.......++||||++|++|.++.............+..+++.||.|||+.|++|
T Consensus 94 ---~----~il~~~~h~~iv~~~~-~~~~~~~~~lv~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH 165 (370)
T cd05596 94 ---R----DIMAHANSEWIVQLHY-AFQDDKYLYMVMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMGFIH 165 (370)
T ss_pred ---H----HHHHhCCCCCcceEEE-EEecCCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 1 1122222322222222 2233456799999999999987643322233344557789999999999999999
Q ss_pred cCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc----CCCCCCCCcccHHHHHHHH
Q 008643 267 GDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL----GFLAKGTDVSPIIPALEAI 342 (558)
Q Consensus 267 ~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~----g~~~~~~Di~~l~~~l~~l 342 (558)
+|+||+|||++.+|.++|+|||++..+....... .....+++.|+||+++.. +..+..+|+|++|+.++++
T Consensus 166 rDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyel 240 (370)
T cd05596 166 RDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVR-----CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 240 (370)
T ss_pred cCCCHHHEEEcCCCCEEEEeccceeeccCCCccc-----CCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHH
Confidence 9999999999999999999999998765432110 012357889999998864 3467889999999999999
Q ss_pred HHh
Q 008643 343 WQN 345 (558)
Q Consensus 343 ~~~ 345 (558)
+.+
T Consensus 241 ltG 243 (370)
T cd05596 241 LVG 243 (370)
T ss_pred HhC
Confidence 974
No 88
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.89 E-value=1.7e-23 Score=217.09 Aligned_cols=215 Identities=20% Similarity=0.265 Sum_probs=158.6
Q ss_pred ChHhhhcccCcceeeeeeccEEEEEEEcCCCcEEEEEEecC-----CChhhHHHHHHHHHHHHHHhhhhhhhccCCChHH
Q 008643 97 PLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRP-----GIEPIIYRDLFLFRTLASFLNGISIQKLGCNAEL 171 (558)
Q Consensus 97 ~~~~~f~~~~~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp-----~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~ 171 (558)
.+..+|.-|.++.+|+|-||.||-|.++++|+.|||||+.. .-+.+++.+++
T Consensus 559 d~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVa----------------------- 615 (888)
T KOG4236|consen 559 DISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVA----------------------- 615 (888)
T ss_pred hHHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHH-----------------------
Confidence 56788999999999999999999999999999999999743 22222333332
Q ss_pred HHHHHHHhhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCC--CHHHHHH
Q 008643 172 IVDEFGEKLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGI--DVGGFLT 249 (558)
Q Consensus 172 iv~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~--~~~~~~~ 249 (558)
+.++. ++|.|..-....+...+.+.|||-+.|.-|.-+...++..+ ...+++.
T Consensus 616 ------------------------ILq~l-~HPGiV~le~M~ET~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlv 670 (888)
T KOG4236|consen 616 ------------------------ILQNL-HHPGIVNLECMFETPERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLV 670 (888)
T ss_pred ------------------------HHHhc-CCCCeeEEEEeecCCceEEEEehhhcchHHHHHHHhhcccchHHHHHHHH
Confidence 33332 45566555666666677789999999855544333333333 3456788
Q ss_pred HHHHHHHHHHHHCCceecCCCCCCEEEecC---CCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCC
Q 008643 250 VGVSAALRQLLEFGLFHGDPHPGNIFAMRD---GRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFL 326 (558)
Q Consensus 250 ~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~d---g~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~ 326 (558)
.||+.+|+|||-.||+|+|+||+|+|+... -++||+|||.++.+.++.-. ..+-|++.|+||++++..-+
T Consensus 671 tQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFR-------rsVVGTPAYLaPEVLrnkGy 743 (888)
T KOG4236|consen 671 TQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFR-------RSVVGTPAYLAPEVLRNKGY 743 (888)
T ss_pred HHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhhh-------hhhcCCccccCHHHHhhccc
Confidence 999999999999999999999999999654 58999999999999875422 34568999999999998778
Q ss_pred CCCCCcccHHHHHHHHHHhhcCCCCCCCCHH-HHHHHHHHHHHhcC
Q 008643 327 AKGTDVSPIIPALEAIWQNSSGKGLADFNFR-SVTGQFNKLVYNYR 371 (558)
Q Consensus 327 ~~~~Di~~l~~~l~~l~~~~~~~~~~~~~~~-~l~~~l~~~~~~~~ 371 (558)
....|+|+.|+++|--+++.+ +||-+ ++-+++.....-||
T Consensus 744 NrSLDMWSVGVIiYVsLSGTF-----PFNEdEdIndQIQNAaFMyP 784 (888)
T KOG4236|consen 744 NRSLDMWSVGVIIYVSLSGTF-----PFNEDEDINDQIQNAAFMYP 784 (888)
T ss_pred cccccceeeeEEEEEEecccc-----cCCCccchhHHhhccccccC
Confidence 889999999988887665322 34433 34555554444444
No 89
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.89 E-value=1.6e-23 Score=213.25 Aligned_cols=247 Identities=21% Similarity=0.212 Sum_probs=165.4
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
-+.+|.|.+|.||.|+++.++..+|+||+....... -+.+.+ .+..+.++.-+|
T Consensus 82 lk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~-------rkKl~R------------------a~tE~eIL~~lD- 135 (459)
T KOG0610|consen 82 LKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLAS-------RKKLKR------------------AQTEREILSLLD- 135 (459)
T ss_pred HHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhh-------hhHHHH------------------HHHHHHHHHhcC-
Confidence 368999999999999998888999999986432111 000000 011112222222
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc---CCCCHHHHHHHHHHHHHHHHHHCC
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG---AGIDVGGFLTVGVSAALRQLLEFG 263 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~---~~~~~~~~~~~~v~~~L~~Lh~~G 263 (558)
|+-+..++..|..+... +|+||||+||+|..+...+. ...+..++|...|+.||+|||-.|
T Consensus 136 ---HPFlPTLYa~fet~~~~-------------cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlG 199 (459)
T KOG0610|consen 136 ---HPFLPTLYASFETDKYS-------------CLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLG 199 (459)
T ss_pred ---CCccchhhheeecccee-------------EEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhc
Confidence 55555555555554444 89999999999986543322 246677899999999999999999
Q ss_pred ceecCCCCCCEEEecCCCeEEeecCcccccChh-------h--------------------H---H-H------------
Q 008643 264 LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQ-------N--------------------K---Q-I------------ 300 (558)
Q Consensus 264 i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~-------~--------------------~---~-~------------ 300 (558)
|+.||+||+||||.+||+|.|.||-++.+.+-. . + . .
T Consensus 200 ivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~ 279 (459)
T KOG0610|consen 200 IVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRS 279 (459)
T ss_pred eeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhcccccccccccccccc
Confidence 999999999999999999999999987654210 0 0 0 0
Q ss_pred HHHHH-------HHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCC
Q 008643 301 LIDAV-------VHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIR 373 (558)
Q Consensus 301 l~~~~-------~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 373 (558)
+.+.+ ...+-|+-+|+||++++..-.+..+|+|.+|.-+|+|+-+ ..|+..-+-. ..+..++. .+.+
T Consensus 280 ~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG--~TPFKG~~~~---~Tl~NIv~-~~l~ 353 (459)
T KOG0610|consen 280 LPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYG--TTPFKGSNNK---ETLRNIVG-QPLK 353 (459)
T ss_pred chhhhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhC--CCCcCCCCch---hhHHHHhc-CCCc
Confidence 00010 0124578899999999998899999999999999999853 2233332222 33444443 3556
Q ss_pred CchhHHHHHHHHHHHHhhhhhcCCCCChhHhhhHHHHHHhhcCCCHHHH
Q 008643 374 IPERFSLVIRSLLTQEGICFTLKPDFKFLEVAYPYVAKRLLTDPNPALR 422 (558)
Q Consensus 374 lP~~~~~~~rsl~~legi~~~LdP~~~~~~~a~p~v~~~ll~~~~p~~r 422 (558)
+|.+- .+...|+..|.+.|.+||+.++-
T Consensus 354 Fp~~~---------------------~vs~~akDLIr~LLvKdP~kRlg 381 (459)
T KOG0610|consen 354 FPEEP---------------------EVSSAAKDLIRKLLVKDPSKRLG 381 (459)
T ss_pred CCCCC---------------------cchhHHHHHHHHHhccChhhhhc
Confidence 66431 23345666667777778777663
No 90
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.89 E-value=4e-23 Score=209.40 Aligned_cols=186 Identities=19% Similarity=0.201 Sum_probs=136.9
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCCh-----hhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIE-----PIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLL 181 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~-----~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~ 181 (558)
.+.||+|++|.||+|+.+.+|+.||||+.+.... +.+..++.+++.
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~----------------------------- 56 (287)
T cd07848 6 LGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRT----------------------------- 56 (287)
T ss_pred EEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHh-----------------------------
Confidence 3689999999999999988999999998764321 111222222211
Q ss_pred hhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCH--HHHHHHHHHHHHHHH
Q 008643 182 EELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDV--GGFLTVGVSAALRQL 259 (558)
Q Consensus 182 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~--~~~~~~~v~~~L~~L 259 (558)
+ .|+|+.++.+.+.... ..++||||++|+.+..+... ..+.+. ...+..|++.+|.||
T Consensus 57 --l----~h~~iv~~~~~~~~~~-------------~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~qi~~~L~~l 116 (287)
T cd07848 57 --L----KQENIVELKEAFRRRG-------------KLYLVFEYVEKNMLELLEEM-PNGVPPEKVRSYIYQLIKAIHWC 116 (287)
T ss_pred --C----CCccccchhhhEecCC-------------EEEEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHH
Confidence 1 2677777776665543 34899999998766543221 123333 345778999999999
Q ss_pred HHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHH
Q 008643 260 LEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPAL 339 (558)
Q Consensus 260 h~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l 339 (558)
|+.|++|+|+||+||+++.+|.++|+|||++..+........ ....++..|++|+....+.++..+|+|++|+.+
T Consensus 117 H~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil 191 (287)
T cd07848 117 HKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANY-----TEYVATRWYRSPELLLGAPYGKAVDMWSVGCIL 191 (287)
T ss_pred HHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccccc-----cccccccccCCcHHHcCCCCCCchhHHhHHHHH
Confidence 999999999999999999999999999999987754322111 112367789999999888888899999999999
Q ss_pred HHHHHhh
Q 008643 340 EAIWQNS 346 (558)
Q Consensus 340 ~~l~~~~ 346 (558)
++++.+.
T Consensus 192 ~el~~g~ 198 (287)
T cd07848 192 GELSDGQ 198 (287)
T ss_pred HHHHhCC
Confidence 9999753
No 91
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.89 E-value=3.5e-23 Score=226.20 Aligned_cols=239 Identities=18% Similarity=0.136 Sum_probs=156.8
Q ss_pred cceeeeeeccEEEEEEEcCC-CcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhc
Q 008643 107 SQTIAAASLGQVYRATLRET-GEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELD 185 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~-G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld 185 (558)
.+.||.|++|.||+|....+ ++.||+|.......... ..+
T Consensus 72 ~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~----------------------------------~~~----- 112 (478)
T PTZ00267 72 TTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQA----------------------------------AYA----- 112 (478)
T ss_pred EEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHH----------------------------------HHH-----
Confidence 57899999999999998767 78899997543211100 001
Q ss_pred HHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHH--h-cCCCCH--HHHHHHHHHHHHHHHH
Q 008643 186 YTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAI--K-GAGIDV--GGFLTVGVSAALRQLL 260 (558)
Q Consensus 186 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~--~-~~~~~~--~~~~~~~v~~~L~~Lh 260 (558)
..|. ++...+.|.+.+.+...+ ...+..+|||||++|++|.+.... . ...++. ...+..|++.+|.|+|
T Consensus 113 -~~E~----~~l~~l~Hpniv~~~~~~-~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH 186 (478)
T PTZ00267 113 -RSEL----HCLAACDHFGIVKHFDDF-KSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVH 186 (478)
T ss_pred -HHHH----HHHHhCCCCCEeEEEEEE-EECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1121 222333333333333322 334667999999999999765321 1 112333 3457789999999999
Q ss_pred HCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHH
Q 008643 261 EFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALE 340 (558)
Q Consensus 261 ~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~ 340 (558)
+.|++|||+||.||+++.+|.++|+|||++..+....... ......|++.|++|+.+..+.++..+|+|++|+.++
T Consensus 187 ~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ 262 (478)
T PTZ00267 187 SRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLD----VASSFCGTPYYLAPELWERKRYSKKADMWSLGVILY 262 (478)
T ss_pred hCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccccc----cccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHH
Confidence 9999999999999999999999999999998776432211 112345788999999998888889999999999999
Q ss_pred HHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCChh
Q 008643 341 AIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKFL 402 (558)
Q Consensus 341 ~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~~~ 402 (558)
+++.+.. ++...+...+... +........|..+..-++.++.. |+..||+-+..
T Consensus 263 el~tg~~--Pf~~~~~~~~~~~---~~~~~~~~~~~~~s~~~~~li~~---~L~~dP~~Rps 316 (478)
T PTZ00267 263 ELLTLHR--PFKGPSQREIMQQ---VLYGKYDPFPCPVSSGMKALLDP---LLSKNPALRPT 316 (478)
T ss_pred HHHhCCC--CCCCCCHHHHHHH---HHhCCCCCCCccCCHHHHHHHHH---HhccChhhCcC
Confidence 9997432 3333333333332 33222223344444445555544 66777876643
No 92
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.89 E-value=7.8e-24 Score=219.73 Aligned_cols=192 Identities=19% Similarity=0.169 Sum_probs=133.4
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|+||.||+|+.+.+|+.||||+.+...... . +....+.+|+
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~--~-----------------------------~~~~~~~~e~-- 52 (330)
T cd05601 6 KSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLA--Q-----------------------------ETVSFFEEER-- 52 (330)
T ss_pred EEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhh--h-----------------------------hHHHHHHHHH--
Confidence 468999999999999998899999999986431100 0 0000111111
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCC--HHHHHHHHHHHHHHHHHHCCc
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGID--VGGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~--~~~~~~~~v~~~L~~Lh~~Gi 264 (558)
.+.....+...+.+... .......++||||++|++|.++........+ ....+..|++.+|.|||+.|+
T Consensus 53 --------~i~~~~~~~~i~~~~~~-~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i 123 (330)
T cd05601 53 --------DILSISNSPWIPQLQYA-FQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGY 123 (330)
T ss_pred --------HHHHhCCCCCCcceeeE-EecCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 11112222222222222 2224567999999999999876543322333 334577899999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHH------cCCCCCCCCcccHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTR------LGFLAKGTDVSPIIPA 338 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~------~g~~~~~~Di~~l~~~ 338 (558)
+|+|+||.||+++.+|+++|+|||++..+....... .....+++.|++|+++. .+.++..+|+|++|+.
T Consensus 124 ~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~i 198 (330)
T cd05601 124 VHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVN-----SKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVI 198 (330)
T ss_pred EcccCchHheEECCCCCEEeccCCCCeECCCCCcee-----eecccCCccccCHHHhccccccccCCCCCcceeecccce
Confidence 999999999999999999999999998775432210 11234788899999986 4556788999999999
Q ss_pred HHHHHHh
Q 008643 339 LEAIWQN 345 (558)
Q Consensus 339 l~~l~~~ 345 (558)
+++++.+
T Consensus 199 l~el~~g 205 (330)
T cd05601 199 AYEMIYG 205 (330)
T ss_pred eeeeccC
Confidence 9999874
No 93
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.89 E-value=8.8e-24 Score=218.30 Aligned_cols=235 Identities=18% Similarity=0.241 Sum_probs=151.9
Q ss_pred ceeeeeeccEEEEEEE---cCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhh
Q 008643 108 QTIAAASLGQVYRATL---RETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEEL 184 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~---~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~El 184 (558)
+.||+|+||.||+++. +.+|+.||||+.+...... .+ ...
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~--~~------------------------------~~~----- 44 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKV--RD------------------------------RVR----- 44 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhh--hh------------------------------HHH-----
Confidence 5799999999999876 3578999999876421100 00 000
Q ss_pred cHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCC--HHHHHHHHHHHHHHHHHHC
Q 008643 185 DYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGID--VGGFLTVGVSAALRQLLEF 262 (558)
Q Consensus 185 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~--~~~~~~~~v~~~L~~Lh~~ 262 (558)
+..|...+ ..+.+.+.+.+-..+ ......+++|||++|++|.+.... ....+ ....+..|++.+|.|||+.
T Consensus 45 -~~~E~~~l----~~l~h~niv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~lH~~ 117 (318)
T cd05582 45 -TKMERDIL----AEVNHPFIVKLHYAF-QTEGKLYLILDFLRGGDLFTRLSK-EVMFTEEDVKFYLAELALALDHLHSL 117 (318)
T ss_pred -HHHHHHHH----HhCCCCCcccEEEEE-EcCCEEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 11122211 122222222222222 224556999999999988765322 22233 3345778999999999999
Q ss_pred CceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHH
Q 008643 263 GLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAI 342 (558)
Q Consensus 263 Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l 342 (558)
|++|+|+||+||+++.+|.++|+|||++.......... ....++..|++|+.......+..+|+|++|+.++++
T Consensus 118 ~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~------~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el 191 (318)
T cd05582 118 GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKA------YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEM 191 (318)
T ss_pred CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCce------ecccCChhhcCHHHHcCCCCCCccceeccceEeeee
Confidence 99999999999999999999999999987654432111 123578899999999877778899999999999999
Q ss_pred HHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCCh
Q 008643 343 WQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKF 401 (558)
Q Consensus 343 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~~ 401 (558)
+++.. ++...+...... .+.+....+|+.+...++.++.. |+..||+-++
T Consensus 192 ~tg~~--p~~~~~~~~~~~----~i~~~~~~~p~~~~~~~~~li~~---~l~~~P~~R~ 241 (318)
T cd05582 192 LTGSL--PFQGKDRKETMT----MILKAKLGMPQFLSPEAQSLLRA---LFKRNPANRL 241 (318)
T ss_pred ccCCC--CCCCCCHHHHHH----HHHcCCCCCCCCCCHHHHHHHHH---HhhcCHhHcC
Confidence 87432 232223222222 23344455665555555555544 5666665553
No 94
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.89 E-value=2.6e-24 Score=216.52 Aligned_cols=187 Identities=24% Similarity=0.283 Sum_probs=132.6
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.+|+||||.||+|.+..++++||||..-++-+ --.+|+.+|+.+ |
T Consensus 29 ~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r-~knrEl~im~~l-------------------------------~- 75 (364)
T KOG0658|consen 29 VRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR-YKNRELQIMRKL-------------------------------D- 75 (364)
T ss_pred eEEEeecccceEEEEEEcCCCceeEEEEecCCCC-cCcHHHHHHHhc-------------------------------C-
Confidence 5789999999999999999999999997655422 223555555532 1
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHH-----hcCCCCHHHHHHHHHHHHHHHHHH
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAI-----KGAGIDVGGFLTVGVSAALRQLLE 261 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~-----~~~~~~~~~~~~~~v~~~L~~Lh~ 261 (558)
|+|++++...|.....- -++ ...|||||++- +|.+.... .+...-..+++..|+..|+.|||+
T Consensus 76 ---HpNIV~L~~~f~~~~~~--d~~------~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~ 143 (364)
T KOG0658|consen 76 ---HPNIVRLLYFFSSSTES--DEV------YLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHS 143 (364)
T ss_pred ---CcCeeeEEEEEEecCCC--chh------HHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHh
Confidence 77777765554332110 000 12589999974 55443321 111233447899999999999999
Q ss_pred CCceecCCCCCCEEEecC-CCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHH-HHcCCCCCCCCcccHHHHH
Q 008643 262 FGLFHGDPHPGNIFAMRD-GRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDF-TRLGFLAKGTDVSPIIPAL 339 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~d-g~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~-~~~g~~~~~~Di~~l~~~l 339 (558)
+||.|||+||.|+|++++ |.+||+|||.++.+....... +.++.-|.. |||+ ...-.++..+|+||.|+.+
T Consensus 144 ~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epni------SYicSRyYR-aPELifga~~Yt~~IDiWSaGCV~ 216 (364)
T KOG0658|consen 144 HGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPNI------SYICSRYYR-APELIFGATEYTTSIDIWSAGCVM 216 (364)
T ss_pred cCcccCCCChheEEEcCCCCeEEeccCCcceeeccCCCce------eEEEecccc-CHHHHcCccccCceeEEhhhhHHH
Confidence 999999999999999987 999999999999998765541 222333433 4444 4445678889999999999
Q ss_pred HHHHHh
Q 008643 340 EAIWQN 345 (558)
Q Consensus 340 ~~l~~~ 345 (558)
.|++-+
T Consensus 217 aELl~g 222 (364)
T KOG0658|consen 217 AELLKG 222 (364)
T ss_pred HHHhcC
Confidence 999864
No 95
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.89 E-value=1.6e-22 Score=204.90 Aligned_cols=235 Identities=20% Similarity=0.255 Sum_probs=162.9
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||.|++|.||+|+...+|+.||+|..+......... .+.+|++..
T Consensus 7 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~---------------------------------~~~~e~~~l 53 (286)
T cd06622 7 DELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFN---------------------------------QIIMELDIL 53 (286)
T ss_pred hhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHH---------------------------------HHHHHHHHH
Confidence 67999999999999998899999999876432211000 111121111
Q ss_pred --HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc--CCCCH--HHHHHHHHHHHHHHHHH
Q 008643 188 --LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG--AGIDV--GGFLTVGVSAALRQLLE 261 (558)
Q Consensus 188 --~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~--~~~~~--~~~~~~~v~~~L~~Lh~ 261 (558)
..|+|+.++.+.+...+.+ +++|||++|++|..+..... ...+. ...+..+++.++.|||+
T Consensus 54 ~~~~~~~i~~~~~~~~~~~~~-------------~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~ 120 (286)
T cd06622 54 HKAVSPYIVDFYGAFFIEGAV-------------YMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE 120 (286)
T ss_pred HhcCCCcHHhhhhheecCCeE-------------EEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 1267888888877665444 89999999999876543221 12333 34567889999999996
Q ss_pred -CCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCC------CCCCCccc
Q 008643 262 -FGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFL------AKGTDVSP 334 (558)
Q Consensus 262 -~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~------~~~~Di~~ 334 (558)
.|++|+|+||.||+++.++.++++|||++..+...... ...+.+.+++|+.+..+.. +..+|+|+
T Consensus 121 ~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~--------~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Diws 192 (286)
T cd06622 121 EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAK--------TNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWS 192 (286)
T ss_pred cCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCccc--------cCCCccCccCcchhcCCCCCccCCCCcccchHh
Confidence 69999999999999999999999999998766432211 1235667889998765433 66799999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCCh
Q 008643 335 IIPALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKF 401 (558)
Q Consensus 335 l~~~l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~~ 401 (558)
+|+.+++++.+.. ++...+.......+..+....+..+|+.+...++.++.. |+..+|+-++
T Consensus 193 lG~il~~l~~g~~--pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~---~l~~~p~~Rp 254 (286)
T cd06622 193 LGLSILEMALGRY--PYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAK---CLNKIPNRRP 254 (286)
T ss_pred HHHHHHHHHhCCC--CCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHH---HcccCcccCC
Confidence 9999999997533 333333444444555555555566777776677777765 6777887663
No 96
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.89 E-value=2e-23 Score=207.29 Aligned_cols=189 Identities=20% Similarity=0.201 Sum_probs=130.7
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||+|+||+||+|+++.+|+.||+|+.+......... .+.+|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~---------------------------------~~~~e---- 43 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKA---------------------------------KFLQE---- 43 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHH---------------------------------HHHHH----
Confidence 46899999999999998899999999876543221111 11111
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHHHHHHHHHHHHCCce
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVGVSAALRQLLEFGLF 265 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~v~~~L~~Lh~~Gi~ 265 (558)
.. +...+.+.+.+.+..+ .......+++|||++|++|.+.........+.. ..+..|++.+|.|||..|++
T Consensus 44 --~~----~l~~l~h~~i~~~~~~-~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~ 116 (252)
T cd05084 44 --AR----ILKQYSHPNIVRLIGV-CTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCI 116 (252)
T ss_pred --HH----HHHhCCCCCcceEEEE-EcCCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 11 1122223222222222 223455689999999999887643322233433 34678899999999999999
Q ss_pred ecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 266 HGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 266 H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
|+|+||+||+++.++.++++|||++.......... .......+..|++|+....+..+..+|+|++|..+++++.
T Consensus 117 H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~ 191 (252)
T cd05084 117 HRDLAARNCLVTEKNVLKISDFGMSREEEDGVYAS----TGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFS 191 (252)
T ss_pred ccccchheEEEcCCCcEEECccccCcccccccccc----cCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999987654321110 0011122456899999988888889999999999999986
No 97
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.89 E-value=2.7e-23 Score=216.26 Aligned_cols=192 Identities=18% Similarity=0.183 Sum_probs=132.0
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|+||+||+|+.+.+|+.||||+.++... ... .....+.+|.+.
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~-----------------------------~~~~~~~~e~~~ 54 (331)
T cd05597 6 LKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEM--LKR-----------------------------AETACFREERDV 54 (331)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHH--hhh-----------------------------hhHHHHHHHHHH
Confidence 4689999999999999988999999999753100 000 000111222211
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCC--CHHHHHHHHHHHHHHHHHHCCc
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGI--DVGGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~--~~~~~~~~~v~~~L~~Lh~~Gi 264 (558)
.... +++.+.....+.......++||||++|++|.++........ .....+..|++.+|.|||+.|+
T Consensus 55 ----------l~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 123 (331)
T cd05597 55 ----------LVNG-DRRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGY 123 (331)
T ss_pred ----------HHhC-CCCCCCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 1112 22222111111122455699999999999987654322223 3345677899999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-----CCCCCCCCcccHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-----GFLAKGTDVSPIIPAL 339 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-----g~~~~~~Di~~l~~~l 339 (558)
+|+|+||+||+++.+|+++|+|||++..+....... .....++..|++|+++.. +..+..+|+|++|+.+
T Consensus 124 vH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l 198 (331)
T cd05597 124 VHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQ-----SNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCM 198 (331)
T ss_pred EECCCCHHHEEECCCCCEEEEECCceeecCCCCCcc-----ccceeccccccCHHHHhhccccccCCCCcceeehhhhHH
Confidence 999999999999999999999999987765432210 011247888999999873 5567789999999999
Q ss_pred HHHHHh
Q 008643 340 EAIWQN 345 (558)
Q Consensus 340 ~~l~~~ 345 (558)
++++.+
T Consensus 199 ~el~~g 204 (331)
T cd05597 199 YEMLYG 204 (331)
T ss_pred HHHhhC
Confidence 999974
No 98
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.89 E-value=1.3e-22 Score=211.04 Aligned_cols=94 Identities=16% Similarity=0.121 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCC
Q 008643 247 FLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFL 326 (558)
Q Consensus 247 ~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~ 326 (558)
.+..|++.||.|||+.|++|+|+||+||+++.++.++|+|||++..+....... ..+...++..|+||+.+..+.+
T Consensus 178 ~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~ 253 (338)
T cd05102 178 CYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYV----RKGSARLPLKWMAPESIFDKVY 253 (338)
T ss_pred HHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchh----cccCCCCCccccCcHHhhcCCC
Confidence 356799999999999999999999999999999999999999998764322110 0111234567999999988888
Q ss_pred CCCCCcccHHHHHHHHHH
Q 008643 327 AKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 327 ~~~~Di~~l~~~l~~l~~ 344 (558)
+..+|+|++|..++++++
T Consensus 254 ~~~sDiwslG~il~el~~ 271 (338)
T cd05102 254 TTQSDVWSFGVLLWEIFS 271 (338)
T ss_pred CcccCHHHHHHHHHHHHh
Confidence 999999999999999986
No 99
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.89 E-value=1.5e-22 Score=204.21 Aligned_cols=193 Identities=17% Similarity=0.187 Sum_probs=139.7
Q ss_pred HhhhcccCcceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHH
Q 008643 99 EAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGE 178 (558)
Q Consensus 99 ~~~f~~~~~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~ 178 (558)
.+.|..+ +.||+|++|.||+|.+..+|+.||+|+.+.........
T Consensus 3 ~~~y~~~--~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~--------------------------------- 47 (277)
T cd06642 3 EELFTKL--ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIE--------------------------------- 47 (277)
T ss_pred HHHHHHH--HHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHH---------------------------------
Confidence 4455544 67999999999999998889999999876432211100
Q ss_pred hhHhhhcHH--HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHH
Q 008643 179 KLLEELDYT--LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAAL 256 (558)
Q Consensus 179 ~l~~Eld~~--~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L 256 (558)
.+..|+... ..|+|+.++...+...+ ..++||||++|+++.+..............+..+++.++
T Consensus 48 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~-------------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~~l 114 (277)
T cd06642 48 DIQQEITVLSQCDSPYITRYYGSYLKGT-------------KLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGL 114 (277)
T ss_pred HHHHHHHHHHcCCCCccHhhhcccccCC-------------ceEEEEEccCCCcHHHHhhcCCCCHHHHHHHHHHHHHHH
Confidence 111111111 12677777766655443 349999999999987653222112223344678899999
Q ss_pred HHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHH
Q 008643 257 RQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPII 336 (558)
Q Consensus 257 ~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~ 336 (558)
.+||+.|++|+|+||+||+++.+|.++++|||++..+....... ....++..|++|+.+..+..+..+|+|++|
T Consensus 115 ~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG 188 (277)
T cd06642 115 DYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR------NTFVGTPFWMAPEVIKQSAYDFKADIWSLG 188 (277)
T ss_pred HHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcchhh------hcccCcccccCHHHhCcCCCchhhhHHHHH
Confidence 99999999999999999999999999999999998776533211 122467788999999888888899999999
Q ss_pred HHHHHHHHh
Q 008643 337 PALEAIWQN 345 (558)
Q Consensus 337 ~~l~~l~~~ 345 (558)
..+++++++
T Consensus 189 ~il~el~tg 197 (277)
T cd06642 189 ITAIELAKG 197 (277)
T ss_pred HHHHHHHhC
Confidence 999999874
No 100
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.88 E-value=2.2e-23 Score=212.15 Aligned_cols=189 Identities=16% Similarity=0.117 Sum_probs=127.6
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||.|+||.||+|+.+.+|+.||+|+.+........ . .+.
T Consensus 10 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~-------------------------~--------~~~----- 51 (288)
T cd07871 10 LDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAP-------------------------C--------TAI----- 51 (288)
T ss_pred eeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcc-------------------------h--------hHH-----
Confidence 46899999999999999889999999987643211000 0 001
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCC--HHHHHHHHHHHHHHHHHHCCc
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGID--VGGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~--~~~~~~~~v~~~L~~Lh~~Gi 264 (558)
+|.. ....+.+.+.+.+..++ ......+++|||++| ++.+.........+ ....+..|++.||.|||+.|+
T Consensus 52 -~E~~----~l~~l~h~niv~~~~~~-~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i 124 (288)
T cd07871 52 -REVS----LLKNLKHANIVTLHDII-HTERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKI 124 (288)
T ss_pred -HHHH----HHHhCCCCCEeeEEEEE-cCCCeEEEEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 1111 12222233222222222 223456899999987 66544322222223 334577899999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-CCCCCCCCcccHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-GFLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-g~~~~~~Di~~l~~~l~~l~ 343 (558)
+|+|+||+||+++.+|.++++|||++......... .....++..|+||+.+.. ...+..+|+|++|+.+++++
T Consensus 125 vH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~ 198 (288)
T cd07871 125 LHRDLKPQNLLINEKGELKLADFGLARAKSVPTKT------YSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMA 198 (288)
T ss_pred ccCCCCHHHEEECCCCCEEECcCcceeeccCCCcc------ccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998765432211 011235778999998764 34677899999999999999
Q ss_pred Hhh
Q 008643 344 QNS 346 (558)
Q Consensus 344 ~~~ 346 (558)
++.
T Consensus 199 ~g~ 201 (288)
T cd07871 199 TGR 201 (288)
T ss_pred hCC
Confidence 753
No 101
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.88 E-value=8.3e-23 Score=214.28 Aligned_cols=199 Identities=17% Similarity=0.152 Sum_probs=134.9
Q ss_pred hhhcccC-cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHH
Q 008643 100 AVFSKIS-SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGE 178 (558)
Q Consensus 100 ~~f~~~~-~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~ 178 (558)
.+...|. .+.||+|+||.||+|....+|+.||||+.......... ..
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~--------------------------------~~ 61 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTH--------------------------------AK 61 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHH--------------------------------HH
Confidence 3444454 57899999999999999889999999987643211000 00
Q ss_pred hhHhhhcHH--HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHH
Q 008643 179 KLLEELDYT--LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAAL 256 (558)
Q Consensus 179 ~l~~Eld~~--~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L 256 (558)
.+.+|+... ..|+|+.++.+.+...... +.....+++|||++|. +.+... ..........+..|++.||
T Consensus 62 ~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-------~~~~~~~lv~e~~~~~-l~~~~~-~~l~~~~~~~~~~qi~~aL 132 (355)
T cd07874 62 RAYRELVLMKCVNHKNIISLLNVFTPQKSL-------EEFQDVYLVMELMDAN-LCQVIQ-MELDHERMSYLLYQMLCGI 132 (355)
T ss_pred HHHHHHHHHHHhCCCchhceeeeeeccccc-------cccceeEEEhhhhccc-HHHHHh-hcCCHHHHHHHHHHHHHHH
Confidence 111111111 1256666655444322111 1123458999999874 322211 1112222345778999999
Q ss_pred HHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHH
Q 008643 257 RQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPII 336 (558)
Q Consensus 257 ~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~ 336 (558)
.|||+.|++|+|+||+||+++.+|.++|+|||++......... ....++..|+||+.+....+++.+|+|++|
T Consensus 133 ~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~-------~~~~~t~~y~aPE~~~~~~~~~~~DiwslG 205 (355)
T cd07874 133 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-------TPYVVTRYYRAPEVILGMGYKENVDIWSVG 205 (355)
T ss_pred HHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCCcccc-------CCccccCCccCHHHHcCCCCCchhhHHHHH
Confidence 9999999999999999999999999999999999876543211 112357789999999877788899999999
Q ss_pred HHHHHHHHhh
Q 008643 337 PALEAIWQNS 346 (558)
Q Consensus 337 ~~l~~l~~~~ 346 (558)
+.+++++.+.
T Consensus 206 ~il~el~~g~ 215 (355)
T cd07874 206 CIMGEMVRHK 215 (355)
T ss_pred HHHHHHHhCC
Confidence 9999999743
No 102
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.88 E-value=7.9e-23 Score=207.79 Aligned_cols=239 Identities=16% Similarity=0.121 Sum_probs=153.8
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||+|+||.||+|+...+|+.||+|+..+.....-. . +..+.
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~-------------------------------~------~~~~~ 48 (285)
T cd05632 6 RVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRK-------------------------------G------ESMAL 48 (285)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhh-------------------------------H------HHHHH
Confidence 6799999999999999889999999987653211000 0 00011
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHH--HHHHHHHHHHHHHHHHCCc
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVG--GFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~--~~~~~~v~~~L~~Lh~~Gi 264 (558)
+|...+. .+.+...+.+...+ ......+++|||++|+++.+...... .+.+.. ..+..|++.++.|||..|+
T Consensus 49 ~E~~il~----~l~~~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i 123 (285)
T cd05632 49 NEKQILE----KVNSQFVVNLAYAY-ETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENT 123 (285)
T ss_pred HHHHHHH----HcCCcCceeEEEEE-ecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 2222222 22333333332222 23456789999999998876543222 233333 4567899999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
+|+|+||+||+++.++.++++|||++......... ....++..+++|+....+..+..+|+|++|..+++++.
T Consensus 124 iH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~-------~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~ 196 (285)
T cd05632 124 VYRDLKPENILLDDYGHIRISDLGLAVKIPEGESI-------RGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIE 196 (285)
T ss_pred eecCCCHHHEEECCCCCEEEecCCcceecCCCCcc-------cCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHh
Confidence 99999999999999999999999998766432211 11246788999999988888889999999999999997
Q ss_pred hhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 345 NSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 345 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
+.. ++...+.......+.+.+.......++.+...+..++.. |+..||+-+
T Consensus 197 g~~--P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~---~l~~~P~~R 247 (285)
T cd05632 197 GQS--PFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKM---LLTKDPKQR 247 (285)
T ss_pred CCC--CCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHHH---HccCCHhHc
Confidence 433 332222222223333333333334444444444444433 555666433
No 103
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.88 E-value=1.3e-23 Score=218.26 Aligned_cols=238 Identities=18% Similarity=0.162 Sum_probs=146.2
Q ss_pred eeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHHHH
Q 008643 110 IAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYTLE 189 (558)
Q Consensus 110 Ig~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~~E 189 (558)
||+|+||.||+|+.+.+|+.||||+..... +..+-.+.+ .. .|
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~---~~~~~~~~~----------------------------~~------~e 43 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKE---IVAKKEVAH----------------------------TI------GE 43 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHH---HhhhhHHHH----------------------------HH------HH
Confidence 699999999999998899999999874210 000000000 00 01
Q ss_pred HHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHCCceecC
Q 008643 190 ARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLEFGLFHGD 268 (558)
Q Consensus 190 a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~~Gi~H~D 268 (558)
. ++... ..+.+++.+.--..+.......+++|||++|++|.+...... ........+..|++.++.|||+.|++|+|
T Consensus 44 ~-~~l~~-~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrD 121 (330)
T cd05586 44 R-NILVR-TLLDESPFIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRD 121 (330)
T ss_pred H-HHHHH-hccCCCCcCcceEEEEecCCeEEEEEcCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecc
Confidence 1 11110 011123322211122233456799999999999865432211 12233445778999999999999999999
Q ss_pred CCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcccHHHHHHHHHHhhc
Q 008643 269 PHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLG-FLAKGTDVSPIIPALEAIWQNSS 347 (558)
Q Consensus 269 lhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g-~~~~~~Di~~l~~~l~~l~~~~~ 347 (558)
+||.||+++.+|.++|+|||++......... .....++..|++|+.+..+ ..+..+|+|++|+.+++++.+..
T Consensus 122 lkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~ 195 (330)
T cd05586 122 LKPENILLDATGHIALCDFGLSKANLTDNKT------TNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWS 195 (330)
T ss_pred CCHHHeEECCCCCEEEecCCcCcCCCCCCCC------ccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCC
Confidence 9999999999999999999998754322211 1123578899999988643 36788999999999999987432
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCCchh-HHHHHHHHHHHHhhhhhcCCCCCh
Q 008643 348 GKGLADFNFRSVTGQFNKLVYNYRIRIPER-FSLVIRSLLTQEGICFTLKPDFKF 401 (558)
Q Consensus 348 ~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~-~~~~~rsl~~legi~~~LdP~~~~ 401 (558)
++..-+... +.+.+.....++|.. +...++.++.. ++..||+.++
T Consensus 196 --Pf~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~li~~---~L~~~P~~R~ 241 (330)
T cd05586 196 --PFYAEDTQQ----MYRNIAFGKVRFPKNVLSDEGRQFVKG---LLNRNPQHRL 241 (330)
T ss_pred --CCCCCCHHH----HHHHHHcCCCCCCCccCCHHHHHHHHH---HcCCCHHHCC
Confidence 222222222 222233333444432 33344444433 5556665554
No 104
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.88 E-value=1e-22 Score=211.84 Aligned_cols=187 Identities=20% Similarity=0.222 Sum_probs=135.6
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|++|.||+|+.+.+|..||+|+.+....... ...+.+|+.
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~---------------------------------~~~~~~E~~- 55 (331)
T cd06649 10 ISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAI---------------------------------RNQIIRELQ- 55 (331)
T ss_pred EEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHH---------------------------------HHHHHHHHH-
Confidence 3689999999999999988999999999876432211 111222221
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCH--HHHHHHHHHHHHHHHHHC-C
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDV--GGFLTVGVSAALRQLLEF-G 263 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~--~~~~~~~v~~~L~~Lh~~-G 263 (558)
. ...+.+.+.+.+..++. ..+..+++|||++|++|.++.... ...+. ...+..+++.++.|||+. |
T Consensus 56 -----~----l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~ 124 (331)
T cd06649 56 -----V----LHECNSPYIVGFYGAFY-SDGEISICMEHMDGGSLDQVLKEA-KRIPEEILGKVSIAVLRGLAYLREKHQ 124 (331)
T ss_pred -----H----HHHCCCCCCCeEEEEEE-ECCEEEEEeecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhhcCC
Confidence 1 11222333333333322 245669999999999998764322 22333 345678899999999985 6
Q ss_pred ceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 008643 264 LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 264 i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~ 343 (558)
++|+|+||+||+++.+|.++|+|||++..+..... ....++..|++|+.+..+.++..+|+|++|+.+++++
T Consensus 125 ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--------~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~ 196 (331)
T cd06649 125 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--------NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELA 196 (331)
T ss_pred EEcCCCChhhEEEcCCCcEEEccCccccccccccc--------ccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHH
Confidence 99999999999999999999999999987654321 1234788899999998888889999999999999999
Q ss_pred Hhh
Q 008643 344 QNS 346 (558)
Q Consensus 344 ~~~ 346 (558)
.+.
T Consensus 197 tg~ 199 (331)
T cd06649 197 IGR 199 (331)
T ss_pred hCC
Confidence 754
No 105
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.88 E-value=3.2e-23 Score=215.69 Aligned_cols=193 Identities=15% Similarity=0.129 Sum_probs=135.4
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|+||.||+|+.+.+|+.||||+....... -..+. ..+.+|
T Consensus 6 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~------------------------------~~~~~e--- 51 (331)
T cd05624 6 IKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEML-KRAET------------------------------ACFREE--- 51 (331)
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHH-hhHHH------------------------------HHHHHH---
Confidence 36899999999999999889999999987531000 00000 001111
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCC--HHHHHHHHHHHHHHHHHHCCc
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGID--VGGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~--~~~~~~~~v~~~L~~Lh~~Gi 264 (558)
.. ..... +++.+.....+.......++||||++|++|.++.......++ ....+..|++.+|+|+|+.|+
T Consensus 52 ---~~----~l~~~-~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~i 123 (331)
T cd05624 52 ---RN----VLVNG-DCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHY 123 (331)
T ss_pred ---HH----HHHhC-CCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 11 11112 233333222333345667999999999999876543222333 345577899999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-----CCCCCCCCcccHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-----GFLAKGTDVSPIIPAL 339 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-----g~~~~~~Di~~l~~~l 339 (558)
+|+|+||+||+++.+|.++|+|||++..+....... .....+++.|++|+++.. +..+..+|+|++|+.+
T Consensus 124 iHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil 198 (331)
T cd05624 124 VHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQ-----SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCM 198 (331)
T ss_pred eeccCchHHEEEcCCCCEEEEeccceeeccCCCcee-----eccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhh
Confidence 999999999999999999999999998765432210 112357889999999875 5567889999999999
Q ss_pred HHHHHhh
Q 008643 340 EAIWQNS 346 (558)
Q Consensus 340 ~~l~~~~ 346 (558)
++++.+.
T Consensus 199 ~ell~g~ 205 (331)
T cd05624 199 YEMLYGE 205 (331)
T ss_pred hhhhhCC
Confidence 9999743
No 106
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.88 E-value=5.8e-23 Score=207.93 Aligned_cols=188 Identities=16% Similarity=0.175 Sum_probs=131.9
Q ss_pred eeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHHHH
Q 008643 110 IAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYTLE 189 (558)
Q Consensus 110 Ig~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~~E 189 (558)
||+|+||+||+++.+.+|+.||+|+...........+ .... .|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~-------------------------------~~~~------~E 43 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGE-------------------------------KMAL------LE 43 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhh-------------------------------HHHH------HH
Confidence 6899999999999988999999998753211000000 0001 11
Q ss_pred HHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHH--HHHHHHHHHHHHHHHCCcee
Q 008643 190 ARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGG--FLTVGVSAALRQLLEFGLFH 266 (558)
Q Consensus 190 a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~--~~~~~v~~~L~~Lh~~Gi~H 266 (558)
.. +...+.+...+.+...+ +.....+++|||++|++|.+...... .+.+... .+..|++.++.+||+.|++|
T Consensus 44 ~~----il~~l~hp~i~~~~~~~-~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH 118 (277)
T cd05607 44 KE----ILEKVNSPFIVNLAYAF-ESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVY 118 (277)
T ss_pred HH----HHHhcCCCcEEEEEEEE-ecCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEE
Confidence 11 12223233222222222 33456799999999999876543222 2344443 45679999999999999999
Q ss_pred cCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHhh
Q 008643 267 GDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNS 346 (558)
Q Consensus 267 ~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~~ 346 (558)
+|+||.||+++.++.++++|||++..+...... ....++..|++|+....+..+..+|+|++|+.+++++.+.
T Consensus 119 ~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~ 191 (277)
T cd05607 119 RDMKPENVLLDDQGNCRLSDLGLAVELKDGKTI-------TQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGR 191 (277)
T ss_pred ccCChHhEEEcCCCCEEEeeceeeeecCCCcee-------eccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCC
Confidence 999999999999999999999998876543211 1124678899999998888889999999999999999754
No 107
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.88 E-value=2.7e-23 Score=210.46 Aligned_cols=232 Identities=16% Similarity=0.134 Sum_probs=164.2
Q ss_pred ccC-cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHH--H-HHHHHHhhhhhhhccCCChHHHHHHHHHh
Q 008643 104 KIS-SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFL--F-RTLASFLNGISIQKLGCNAELIVDEFGEK 179 (558)
Q Consensus 104 ~~~-~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~i--l-r~~~~~~~~~~~~~~~~~~~~iv~e~~~~ 179 (558)
+|+ ...||+||||.|-.|..+.+.+.+||||.+.++.-+ ..|++. . +++..+
T Consensus 350 DFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQ-dDDvectm~EKrvLAL----------------------- 405 (683)
T KOG0696|consen 350 DFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQ-DDDVECTMVEKRVLAL----------------------- 405 (683)
T ss_pred ccceEEEeccCccceeeeecccCcchhhhhhhhccceeee-cCcccceehhhhheec-----------------------
Confidence 444 578999999999999998888999999998775311 011110 0 011000
Q ss_pred hHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCC-HHHHhcCCCCHHHHHHHHHHHHHHH
Q 008643 180 LLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTD-PQAIKGAGIDVGGFLTVGVSAALRQ 258 (558)
Q Consensus 180 l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d-~~~~~~~~~~~~~~~~~~v~~~L~~ 258 (558)
-..-+.+.++...|+....+ |+||||+.||+|.- +....+...+.+.+|...|..||-+
T Consensus 406 -------~~kppFL~qlHScFQTmDRL-------------yFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFF 465 (683)
T KOG0696|consen 406 -------PGKPPFLVQLHSCFQTMDRL-------------YFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFF 465 (683)
T ss_pred -------CCCCchHHHHHHHhhhhhhe-------------eeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhh
Confidence 00124455666777665554 99999999999853 3344555677888899999999999
Q ss_pred HHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHH
Q 008643 259 LLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPA 338 (558)
Q Consensus 259 Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~ 338 (558)
||+.||+.||+|..||+++.+|++||.||||+++---+.. ...+++|+++|+||+++....++..+|.|++|+.
T Consensus 466 Lh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~------TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVL 539 (683)
T KOG0696|consen 466 LHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGV------TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVL 539 (683)
T ss_pred hhcCCeeeeeccccceEeccCCceEeeecccccccccCCc------ceeeecCCCcccccceEEecccccchhHHHHHHH
Confidence 9999999999999999999999999999999985322111 1245789999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHH
Q 008643 339 LEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLT 387 (558)
Q Consensus 339 l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~ 387 (558)
|++++.+ ..+++.-+-.++.+.+.+--..||-.+..+...+.+++++
T Consensus 540 LyEmlaG--QpPFdGeDE~elF~aI~ehnvsyPKslSkEAv~ickg~lt 586 (683)
T KOG0696|consen 540 LYEMLAG--QPPFDGEDEDELFQAIMEHNVSYPKSLSKEAVAICKGLLT 586 (683)
T ss_pred HHHHHcC--CCCCCCCCHHHHHHHHHHccCcCcccccHHHHHHHHHHhh
Confidence 9999973 3344444444444443333333444444444455555543
No 108
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.88 E-value=2.9e-22 Score=219.79 Aligned_cols=247 Identities=16% Similarity=0.128 Sum_probs=155.9
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|+||.||+|+.+.+|+.||||+.+...... .+. ..+..|+..
T Consensus 37 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~--~~~------------------------------~~~~~Ei~~ 84 (496)
T PTZ00283 37 SRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSE--ADK------------------------------NRAQAEVCC 84 (496)
T ss_pred EEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCH--HHH------------------------------HHHHHHHHH
Confidence 478999999999999998899999999876532110 000 001111111
Q ss_pred HH--HHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc---CCCCH--HHHHHHHHHHHHHHH
Q 008643 187 TL--EARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG---AGIDV--GGFLTVGVSAALRQL 259 (558)
Q Consensus 187 ~~--Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~---~~~~~--~~~~~~~v~~~L~~L 259 (558)
.. .|.|+.++...+...... ........+++|||++|++|.+...... ..++. ...+..|++.+|.|+
T Consensus 85 l~~~~h~~iv~~~~~~~~~~~~-----~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~l 159 (496)
T PTZ00283 85 LLNCDFFSIVKCHEDFAKKDPR-----NPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHV 159 (496)
T ss_pred HhcCCCCcEEEeecceeccccc-----CcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHH
Confidence 10 122222222111110000 0000112479999999999977543221 12222 345778999999999
Q ss_pred HHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHH
Q 008643 260 LEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPAL 339 (558)
Q Consensus 260 h~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l 339 (558)
|..|++|+|+||+||+++.+|.++|+|||+++.+....... ......+++.|++|+++..+.++..+|+|++|+.+
T Consensus 160 H~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~----~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvil 235 (496)
T PTZ00283 160 HSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDD----VGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLL 235 (496)
T ss_pred HhCCEecCCCCHHHEEEeCCCCEEEEecccCeecccccccc----ccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHH
Confidence 99999999999999999999999999999988765322111 11224578899999999988888999999999999
Q ss_pred HHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCChh
Q 008643 340 EAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKFL 402 (558)
Q Consensus 340 ~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~~~ 402 (558)
++++.+.. ++...+...+... ........+|+.+..-++.++.. |+..||+-+..
T Consensus 236 yeLltG~~--Pf~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~li~~---~L~~dP~~RPs 290 (496)
T PTZ00283 236 YELLTLKR--PFDGENMEEVMHK---TLAGRYDPLPPSISPEMQEIVTA---LLSSDPKRRPS 290 (496)
T ss_pred HHHHHCCC--CCCCCCHHHHHHH---HhcCCCCCCCCCCCHHHHHHHHH---HcccChhhCcC
Confidence 99998432 3334444433332 22222223455444445555544 67778887754
No 109
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.88 E-value=3.6e-23 Score=217.30 Aligned_cols=228 Identities=14% Similarity=0.202 Sum_probs=160.7
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCCh--hhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhc
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIE--PIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELD 185 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~--~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld 185 (558)
+.||+|-||.||.|++ ....+||||.++++.. +...++..+|+.+.
T Consensus 212 ~~LG~G~FG~V~~g~~-~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~------------------------------- 259 (468)
T KOG0197|consen 212 RELGSGQFGEVWLGKW-NGSTKVAVKTIKEGSMSPEAFLREAQIMKKLR------------------------------- 259 (468)
T ss_pred HHhcCCccceEEEEEE-cCCCcccceEEeccccChhHHHHHHHHHHhCc-------------------------------
Confidence 5699999999999999 4555999999988621 22233333333321
Q ss_pred HHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHh-cCCCCHH--HHHHHHHHHHHHHHHHC
Q 008643 186 YTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIK-GAGIDVG--GFLTVGVSAALRQLLEF 262 (558)
Q Consensus 186 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~-~~~~~~~--~~~~~~v~~~L~~Lh~~ 262 (558)
|+|++++++...... ..+|||||++.|+|.++.... ...++.. ..+..||++|+.||.++
T Consensus 260 ----H~~lV~l~gV~~~~~-------------piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~ 322 (468)
T KOG0197|consen 260 ----HEKLVKLYGVCTKQE-------------PIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK 322 (468)
T ss_pred ----ccCeEEEEEEEecCC-------------ceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC
Confidence 444444444333322 359999999999998876542 2223333 34778999999999999
Q ss_pred CceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHH
Q 008643 263 GLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAI 342 (558)
Q Consensus 263 Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l 342 (558)
++|||||-..||||++++.+||.||||++.+.++....- .-..--..+.||+.+..|..+.++|+|+||+.|+++
T Consensus 323 ~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~-----~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~ 397 (468)
T KOG0197|consen 323 NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTAS-----EGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWEL 397 (468)
T ss_pred CccchhhhhhheeeccCceEEEcccccccccCCCceeec-----CCCCCCceecCHHHHhhCCcccccceeehhhhHHHH
Confidence 999999999999999999999999999996655432110 000113456899999999999999999999999999
Q ss_pred HHhhcCCCCCCCCHHHHHHHHHHHHHhcCCC----CchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 343 WQNSSGKGLADFNFRSVTGQFNKLVYNYRIR----IPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 343 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~----lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
++. ...+...++..+++..+.+ .|... +|+++..+++ . |...+|+.+
T Consensus 398 fT~-G~~py~~msn~ev~~~le~---GyRlp~P~~CP~~vY~lM~----~---CW~~~P~~R 448 (468)
T KOG0197|consen 398 FTY-GRVPYPGMSNEEVLELLER---GYRLPRPEGCPDEVYELMK----S---CWHEDPEDR 448 (468)
T ss_pred hcc-CCCCCCCCCHHHHHHHHhc---cCcCCCCCCCCHHHHHHHH----H---HhhCCcccC
Confidence 984 3335566766666665443 44443 4555554444 3 899999766
No 110
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.88 E-value=1.2e-22 Score=206.80 Aligned_cols=233 Identities=18% Similarity=0.194 Sum_probs=155.8
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|++|.||+|....+|+.||||+.++...... +....+.
T Consensus 6 ~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~-------------------------------~~~~~~~----- 49 (290)
T cd05580 6 IKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKL-------------------------------KQVEHVL----- 49 (290)
T ss_pred EEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhh-------------------------------hHHHHHH-----
Confidence 3689999999999999988999999998764211000 0000111
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCH--HHHHHHHHHHHHHHHHHCCc
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDV--GGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~--~~~~~~~v~~~L~~Lh~~Gi 264 (558)
+|.. ....+.+.+.+.+...+. .....+++|||++|++|.+..... ..++. ...+..+++.+|.+||+.|+
T Consensus 50 -~e~~----~l~~l~h~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l~~lH~~~i 122 (290)
T cd05580 50 -NEKR----ILQSIRHPFLVNLYGSFQ-DDSNLYLVMEYVPGGELFSHLRKS-GRFPEPVARFYAAQVVLALEYLHSLDI 122 (290)
T ss_pred -HHHH----HHHhCCCCCccceeeEEE-cCCeEEEEEecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 1111 122222322233333222 244568999999999997754332 22333 34467899999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
+|+|+||.||+++.+|.++++|||++..+.... ....++..+++|+....+..+..+|+|++|..+++++.
T Consensus 123 ~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~ 193 (290)
T cd05580 123 VYRDLKPENLLLDSDGYIKITDFGFAKRVKGRT---------YTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLA 193 (290)
T ss_pred ecCCCCHHHEEECCCCCEEEeeCCCccccCCCC---------CCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHh
Confidence 999999999999999999999999998776541 12346778999999887777888999999999999997
Q ss_pred hhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 345 NSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 345 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
+.. ++...+... ..+.+......+|..+..-++.++.. |+..||+.+
T Consensus 194 g~~--p~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~li~~---~l~~~p~~R 240 (290)
T cd05580 194 GYP--PFFDDNPIQ----IYEKILEGKVRFPSFFSPDAKDLIRN---LLQVDLTKR 240 (290)
T ss_pred CCC--CCCCCCHHH----HHHHHhcCCccCCccCCHHHHHHHHH---HccCCHHHc
Confidence 432 222223222 22223345566676666666666654 666677554
No 111
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.88 E-value=9e-23 Score=209.23 Aligned_cols=245 Identities=19% Similarity=0.170 Sum_probs=161.9
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||.|.-++||+|+.+.+++.||||+..-+ ....|+..+++ |+.-
T Consensus 31 ~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLE---kc~~~ld~l~k------------------------------E~~~ 77 (516)
T KOG0582|consen 31 QEVIGVGASAVVYLARCIPTNEVVAIKIINLE---KCNNDLDALRK------------------------------EVQT 77 (516)
T ss_pred EEEEeccceeEeeeeeecccCCEEEEEEeehh---hhhhhHHHHHH------------------------------HHHH
Confidence 36899999999999999999999999987422 11222221111 1100
Q ss_pred --HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHH-hcCCCCHH--HHHHHHHHHHHHHHHH
Q 008643 187 --TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAI-KGAGIDVG--GFLTVGVSAALRQLLE 261 (558)
Q Consensus 187 --~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~-~~~~~~~~--~~~~~~v~~~L~~Lh~ 261 (558)
...|+|+..++..| ......|+||.|+.||++.++... -..|++.. ..+.++++.||.|||.
T Consensus 78 msl~~HPNIv~~~~sF-------------vv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~ 144 (516)
T KOG0582|consen 78 MSLIDHPNIVTYHCSF-------------VVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQ 144 (516)
T ss_pred hhhcCCCCcceEEEEE-------------EecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHh
Confidence 00144444433333 335566999999999999987543 23355554 3467889999999999
Q ss_pred CCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHH--cCCCCCCCCcccHHHHH
Q 008643 262 FGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTR--LGFLAKGTDVSPIIPAL 339 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~--~g~~~~~~Di~~l~~~l 339 (558)
+|.+|||+|+|||||+.||.|+|.|||.+..+-+.......+. ..+.+++.+|||++.. .--++.++|||+||.+.
T Consensus 145 ~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf--~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA 222 (516)
T KOG0582|consen 145 NGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVTRF--NTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITA 222 (516)
T ss_pred cCceecccccccEEEcCCCcEEEcCceeeeeecccCceeeEee--ccccCcccccChHHhhhcccCccchhhhhhhhHHH
Confidence 9999999999999999999999999999887765332111111 4556899999999843 23356789999999988
Q ss_pred HHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCC-----CCch-hHHHHHHHHHHHHhhhhhcCCCCChhHh
Q 008643 340 EAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRI-----RIPE-RFSLVIRSLLTQEGICFTLKPDFKFLEV 404 (558)
Q Consensus 340 ~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-----~lP~-~~~~~~rsl~~legi~~~LdP~~~~~~~ 404 (558)
-++..+. .|+..+. -+..+...+...|. .+|. .....-+++-.+-+.|+.-||.-+..+.
T Consensus 223 ~ELA~G~--aPf~k~p---PmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAs 288 (516)
T KOG0582|consen 223 CELAHGH--APFSKYP---PMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTAS 288 (516)
T ss_pred HHHhcCC--CCcccCC---hHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHH
Confidence 8887643 2333332 12333333333332 2222 2333444566666779999999886554
No 112
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.88 E-value=1.2e-22 Score=206.56 Aligned_cols=190 Identities=18% Similarity=0.165 Sum_probs=134.4
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||+|+||+||+|..+.+|+.||||...+....... ....+.
T Consensus 6 ~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~-------------------------------~~~~~~------ 48 (285)
T cd05630 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRK-------------------------------GESMAL------ 48 (285)
T ss_pred EEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchH-------------------------------HHHHHH------
Confidence 6799999999999999999999999987653211000 000111
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCH--HHHHHHHHHHHHHHHHHCCc
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDV--GGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~--~~~~~~~v~~~L~~Lh~~Gi 264 (558)
+|.. +...+.+...+.+...+. .....+++|||++|++|.+...... .+.+. ...+..|++.++.|||+.|+
T Consensus 49 ~E~~----il~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i 123 (285)
T cd05630 49 NEKQ----ILEKVNSRFVVSLAYAYE-TKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERI 123 (285)
T ss_pred HHHH----HHHhCCCCCeeeeeEEEe-cCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 1221 222233333332322222 2456789999999999977543222 23333 34567899999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
+|+|+||.||+++.++.++++|||++......... ....++..+++|+....+..+..+|+|++|..+++++.
T Consensus 124 iH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~-------~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~ 196 (285)
T cd05630 124 VYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI-------KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIA 196 (285)
T ss_pred EeCCCCHHHEEECCCCCEEEeeccceeecCCCccc-------cCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHh
Confidence 99999999999999999999999998765433211 11246788999999988888899999999999999997
Q ss_pred hh
Q 008643 345 NS 346 (558)
Q Consensus 345 ~~ 346 (558)
+.
T Consensus 197 g~ 198 (285)
T cd05630 197 GQ 198 (285)
T ss_pred CC
Confidence 43
No 113
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=99.87 E-value=1.8e-23 Score=207.53 Aligned_cols=189 Identities=20% Similarity=0.185 Sum_probs=130.4
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
..|++|+||.||+|++++|++.||+|.++++.++ -|+... -.+|++..
T Consensus 82 nrI~EGtyGiVYRakdk~t~eIVALKr~kmekek-----------------------~GFPIt---------sLREIniL 129 (419)
T KOG0663|consen 82 NRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEK-----------------------EGFPIT---------SLREINIL 129 (419)
T ss_pred hhcccCcceeEEEeccCCcceeEEeeeccccccc-----------------------CCCcch---------hHHHHHHH
Confidence 5799999999999999999999999998876432 122221 12333221
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeee-cCCCceEEEEeeeCCCCCCCHHHH-h-cCCCCHHHHHHHHHHHHHHHHHHCCc
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYK-RLSGSRVLVMEWIDGIRCTDPQAI-K-GAGIDVGGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~-~~~~~~vLvmE~i~G~~L~d~~~~-~-~~~~~~~~~~~~~v~~~L~~Lh~~Gi 264 (558)
-.+.|.+.|.|-.|+- .--...|||||||+. +|..+... . .......+++..|++.|++|||.+.|
T Consensus 130 ----------l~~~H~NIV~vkEVVvG~~~d~iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wi 198 (419)
T KOG0663|consen 130 ----------LKARHPNIVEVKEVVVGSNMDKIYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWI 198 (419)
T ss_pred ----------HhcCCCCeeeeEEEEeccccceeeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhcee
Confidence 1112333444444432 223456999999985 33332211 1 22345567899999999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHH-HcCCCCCCCCcccHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFT-RLGFLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~-~~g~~~~~~Di~~l~~~l~~l~ 343 (558)
+|||+||+|+|+++.|.+|++|||+++.+....+. ++..++.+. |-||+++ ..-.++..+|+|++||++.+++
T Consensus 199 lHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~-~T~lVVTLW-----YRaPELLLG~~tyst~iDMWSvGCI~aE~l 272 (419)
T KOG0663|consen 199 LHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKP-YTPLVVTLW-----YRAPELLLGAKTYSTAVDMWSVGCIFAELL 272 (419)
T ss_pred EecccchhheeeccCCcEEecccchhhhhcCCccc-CcceEEEee-----ecCHHHhcCCcccCcchhhhhHHHHHHHHH
Confidence 99999999999999999999999999998875322 222333222 3344443 3345677899999999999999
Q ss_pred Hh
Q 008643 344 QN 345 (558)
Q Consensus 344 ~~ 345 (558)
..
T Consensus 273 ~~ 274 (419)
T KOG0663|consen 273 TQ 274 (419)
T ss_pred hc
Confidence 74
No 114
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.87 E-value=3.2e-22 Score=213.24 Aligned_cols=181 Identities=16% Similarity=0.108 Sum_probs=128.0
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|+||.||+|+++.+|+.||||+... ..+.+++.+++.+
T Consensus 97 ~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---~~~~~E~~il~~l--------------------------------- 140 (391)
T PHA03212 97 LETFTPGAEGFAFACIDNKTCEHVVIKAGQR---GGTATEAHILRAI--------------------------------- 140 (391)
T ss_pred EEEEcCCCCeEEEEEEECCCCCEEEEechhh---hhhHHHHHHHHhC---------------------------------
Confidence 4789999999999999999999999996432 1122222222211
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCH--HHHHHHHHHHHHHHHHHCCc
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDV--GGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~--~~~~~~~v~~~L~~Lh~~Gi 264 (558)
.|+|+.++. ..+ ......+++||++.| .+.+.... ....+. ...+..|++.||.|||++||
T Consensus 141 --~HpnIv~~~------------~~~-~~~~~~~lv~e~~~~-~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~ylH~~~I 203 (391)
T PHA03212 141 --NHPSIIQLK------------GTF-TYNKFTCLILPRYKT-DLYCYLAA-KRNIAICDILAIERSVLRAIQYLHENRI 203 (391)
T ss_pred --CCCCCCCEe------------EEE-EECCeeEEEEecCCC-CHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 133333332 222 224456899999964 44433221 223333 34577899999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
+|||+||+||+++.+|.++|+|||++.......... .....+++.|++|+++..+.+++.+|+|++|+.++++++
T Consensus 204 vHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt 278 (391)
T PHA03212 204 IHRDIKAENIFINHPGDVCLGDFGAACFPVDINANK-----YYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMAT 278 (391)
T ss_pred ccCCCChHhEEEcCCCCEEEEeCCcccccccccccc-----cccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999986543221111 112357888999999988888899999999999999997
Q ss_pred h
Q 008643 345 N 345 (558)
Q Consensus 345 ~ 345 (558)
+
T Consensus 279 g 279 (391)
T PHA03212 279 C 279 (391)
T ss_pred C
Confidence 5
No 115
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.87 E-value=1.1e-22 Score=211.65 Aligned_cols=192 Identities=16% Similarity=0.151 Sum_probs=132.9
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|+||.||+++.+.+++.||+|+...... ... .....+.+|
T Consensus 6 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~--~~~-----------------------------~~~~~~~~e--- 51 (332)
T cd05623 6 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEM--LKR-----------------------------AETACFREE--- 51 (332)
T ss_pred EEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHH--HHh-----------------------------hHHHHHHHH---
Confidence 4689999999999999988899999998742100 000 000011111
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCC--HHHHHHHHHHHHHHHHHHCCc
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGID--VGGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~--~~~~~~~~v~~~L~~Lh~~Gi 264 (558)
.. ..... +++.+.-...+.......++||||++|++|.++........+ ....+..|++.++.|||+.|+
T Consensus 52 ---~~----~l~~~-~~~~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~i 123 (332)
T cd05623 52 ---RD----VLVNG-DNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHY 123 (332)
T ss_pred ---HH----HHhhC-CCCCEeeEEEEEecCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 11 11222 233332222222334667999999999999876543222233 345677899999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHH-----cCCCCCCCCcccHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTR-----LGFLAKGTDVSPIIPAL 339 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~-----~g~~~~~~Di~~l~~~l 339 (558)
+|+|+||.||+++.+|+++|+|||++..+....... .....|+..|++|+++. .+..+..+|+|++|+.+
T Consensus 124 iHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil 198 (332)
T cd05623 124 VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ-----SSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCM 198 (332)
T ss_pred EecCCCHHHEEECCCCCEEEeecchheecccCCcce-----ecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHH
Confidence 999999999999999999999999987654322110 11234788999999986 34567889999999999
Q ss_pred HHHHHh
Q 008643 340 EAIWQN 345 (558)
Q Consensus 340 ~~l~~~ 345 (558)
++++.+
T Consensus 199 ~ell~g 204 (332)
T cd05623 199 YEMLYG 204 (332)
T ss_pred HHHhcC
Confidence 999974
No 116
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.87 E-value=9e-22 Score=196.56 Aligned_cols=237 Identities=22% Similarity=0.254 Sum_probs=158.7
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||.|++|.||+|.++.+|+.||+|+........... .+..|++.
T Consensus 6 ~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~---------------------------------~~~~e~~~ 52 (265)
T cd06605 6 LGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQK---------------------------------QILRELDI 52 (265)
T ss_pred HHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHH---------------------------------HHHHHHHH
Confidence 367999999999999998899999999887653221111 11112211
Q ss_pred HH--HHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHHHHHHHHHHHH-
Q 008643 187 TL--EARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVGVSAALRQLLE- 261 (558)
Q Consensus 187 ~~--Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~v~~~L~~Lh~- 261 (558)
.. .|+|+.++...+... +..+++|||++|++|.++........+.. ..+..+++.++.++|.
T Consensus 53 l~~~~~~~i~~~~~~~~~~-------------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~ 119 (265)
T cd06605 53 LHKCNSPYIVGFYGAFYNN-------------GDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEK 119 (265)
T ss_pred HHHCCCCchhhhheeeecC-------------CEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCC
Confidence 11 156666655544333 34589999999999987654332223332 3467889999999999
Q ss_pred CCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHH
Q 008643 262 FGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEA 341 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~ 341 (558)
.|++|+|+||+||+++.+|.++++|||.+..+....... ..++..|++|+.......+..+|+|++|..+++
T Consensus 120 ~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~--------~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~ 191 (265)
T cd06605 120 HKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKT--------FVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIE 191 (265)
T ss_pred CCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhc--------ccCChhccCHHHHcCCCCCchhhHHHHHHHHHH
Confidence 999999999999999999999999999987665432221 456788999999988888888999999999999
Q ss_pred HHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchh-HHHHHHHHHHHHhhhhhcCCCCC
Q 008643 342 IWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPER-FSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 342 l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~-~~~~~rsl~~legi~~~LdP~~~ 400 (558)
++.+........-........+.......+..+|.. +..-++.++.. |+..||+-+
T Consensus 192 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~---~l~~~p~~R 248 (265)
T cd06605 192 LATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNL---CLIKDPRER 248 (265)
T ss_pred HHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHH---HcCCCchhC
Confidence 997432211111011122333333444444455554 44455555544 666666554
No 117
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.87 E-value=3.1e-22 Score=208.47 Aligned_cols=189 Identities=20% Similarity=0.249 Sum_probs=133.9
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|+||.||+|+++.+|..||+|+.+........ ..+.+|+
T Consensus 10 ~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~---------------------------------~~~~~E~-- 54 (333)
T cd06650 10 ISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIR---------------------------------NQIIREL-- 54 (333)
T ss_pred eccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHH---------------------------------HHHHHHH--
Confidence 36899999999999999889999999987654322110 0111121
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC-CCCHHHHHHHHHHHHHHHHHH-CCc
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA-GIDVGGFLTVGVSAALRQLLE-FGL 264 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~-~~~~~~~~~~~v~~~L~~Lh~-~Gi 264 (558)
+.+ ..+.+.+.+.+...+.+ ....+++|||++|++|.++...... .......+..+++.++.|||+ +|+
T Consensus 55 ----~~l----~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i 125 (333)
T cd06650 55 ----QVL----HECNSPYIVGFYGAFYS-DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 125 (333)
T ss_pred ----HHH----HHCCCCcccceeEEEEE-CCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCE
Confidence 111 11222222333333322 4566999999999999876432221 222234567789999999997 589
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
+|+|+||+||+++.+|.++++|||++..+..... ....++..|++|+.+.....+..+|+|++|+.+++++.
T Consensus 126 vH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~ 197 (333)
T cd06650 126 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--------NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAI 197 (333)
T ss_pred EecCCChhhEEEcCCCCEEEeeCCcchhhhhhcc--------ccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999876543211 12346788999999988778889999999999999987
Q ss_pred hhc
Q 008643 345 NSS 347 (558)
Q Consensus 345 ~~~ 347 (558)
+..
T Consensus 198 g~~ 200 (333)
T cd06650 198 GRY 200 (333)
T ss_pred CCC
Confidence 543
No 118
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.87 E-value=2.3e-22 Score=203.05 Aligned_cols=195 Identities=17% Similarity=0.156 Sum_probs=136.4
Q ss_pred HhhhcccCcceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHH
Q 008643 99 EAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGE 178 (558)
Q Consensus 99 ~~~f~~~~~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~ 178 (558)
++.|..+ +.||+|++|+||+|+++.+|+.||||+........ .
T Consensus 3 ~~~y~~~--~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~---~-------------------------------- 45 (277)
T cd06640 3 EELFTKL--ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAED---E-------------------------------- 45 (277)
T ss_pred HHhhhhh--hhcccCCCeEEEEEEEccCCEEEEEEEEeccccHH---H--------------------------------
Confidence 3444444 67999999999999998889999999875321110 0
Q ss_pred hhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHH
Q 008643 179 KLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQ 258 (558)
Q Consensus 179 ~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~ 258 (558)
.-++.+|.. +...+.+...+.+...+. .....++||||++|++|.+..............+..+++.++.+
T Consensus 46 ----~~~~~~e~~----~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~ 116 (277)
T cd06640 46 ----IEDIQQEIT----VLSQCDSPYVTKYYGSYL-KGTKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDY 116 (277)
T ss_pred ----HHHHHHHHH----HHHhCCCCCEeeEEEEEE-ECCEEEEEEecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 001122222 222233333333333333 24667999999999999775432222222233466789999999
Q ss_pred HHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHH
Q 008643 259 LLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPA 338 (558)
Q Consensus 259 Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~ 338 (558)
+|..|++|+|++|+||+++.+++++++|||++..+....... ....++..+++|+....+..+..+|+|++|..
T Consensus 117 lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~i 190 (277)
T cd06640 117 LHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR------NTFVGTPFWMAPEVIQQSAYDSKADIWSLGIT 190 (277)
T ss_pred HHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCcccc------ccccCcccccCHhHhccCCCccHHHHHHHHHH
Confidence 999999999999999999999999999999998765432111 11235667889999888888889999999999
Q ss_pred HHHHHHh
Q 008643 339 LEAIWQN 345 (558)
Q Consensus 339 l~~l~~~ 345 (558)
+++++++
T Consensus 191 l~el~tg 197 (277)
T cd06640 191 AIELAKG 197 (277)
T ss_pred HHHHHHC
Confidence 9999974
No 119
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.87 E-value=1.3e-21 Score=187.85 Aligned_cols=180 Identities=24% Similarity=0.306 Sum_probs=120.3
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
.+||+|++|+||+|++. +|+.||||+.+++... ...+...+.....+. ......+...++.++ +.
T Consensus 3 ~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~---------~~ 67 (190)
T cd05145 3 GCISTGKEANVYHARTG-DGEELAVKIYKTSTLS-FKDRDKYIEGDPRFR----SRYSKSNPRKLVFAW---------AE 67 (190)
T ss_pred ceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcce-EeeHHHHhcCCcccc----cccccCCHHHHHHHH---------HH
Confidence 58999999999999995 9999999999987432 111111111000000 000011222222222 34
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCC--HHHHHHHHHHHHHHHHHH-CCc
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGID--VGGFLTVGVSAALRQLLE-FGL 264 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~--~~~~~~~~v~~~L~~Lh~-~Gi 264 (558)
.|++++.++.. +.+.+|.++.. ...+|||||++|+.+... .+.....+ ....+..+++.++.++|. .||
T Consensus 68 ~E~~~l~~l~~-----~~i~~p~~~~~--~~~~lVmE~~~g~~~~~~-~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~gi 139 (190)
T cd05145 68 KEFRNLKRLYE-----AGVPVPEPILL--KKNVLVMEFIGDDGSPAP-RLKDVPLEEEEAEELYEQVVEQMRRLYQEAGL 139 (190)
T ss_pred HHHHHHHHHHh-----CCCCCceEEEe--cCCEEEEEEecCCCchhh-hhhhccCCHHHHHHHHHHHHHHHHHHHHhCCE
Confidence 67888888854 45677887764 345999999999855432 12223333 334577889999999999 999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMAN 318 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~ 318 (558)
+|+||||+||+++ +|+++++|||++..++...-. .++.+|+..+..
T Consensus 140 vHrDlkP~NIll~-~~~~~liDFG~a~~~~~~~~~-------~~~~~~~~~~~~ 185 (190)
T cd05145 140 VHGDLSEYNILYH-DGKPYIIDVSQAVELDHPNAL-------EFLRRDIRNINR 185 (190)
T ss_pred ecCCCChhhEEEE-CCCEEEEEcccceecCCCCHH-------HHHHHHHHHHHH
Confidence 9999999999998 899999999999998765332 334566666554
No 120
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.87 E-value=3.1e-22 Score=210.73 Aligned_cols=191 Identities=16% Similarity=0.138 Sum_probs=129.9
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|+||.||+|..+.+++.||||+........-. ...+.+|+..
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~--------------------------------~~~~~~E~~~ 76 (364)
T cd07875 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTH--------------------------------AKRAYRELVL 76 (364)
T ss_pred EEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchh--------------------------------HHHHHHHHHH
Confidence 47899999999999999889999999987643211000 0011111111
Q ss_pred H--HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHCCc
Q 008643 187 T--LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 187 ~--~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi 264 (558)
. ..|+|+.++...+...... ......++||||++|. +.+... ..........+..|++.||.|||+.|+
T Consensus 77 l~~l~h~~ii~~~~~~~~~~~~-------~~~~~~~lv~e~~~~~-l~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~i 147 (364)
T cd07875 77 MKCVNHKNIIGLLNVFTPQKSL-------EEFQDVYIVMELMDAN-LCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAGI 147 (364)
T ss_pred HHhcCCCCccccceeecccccc-------cccCeEEEEEeCCCCC-HHHHHH-hcCCHHHHHHHHHHHHHHHHHHhhCCe
Confidence 0 0144444444333221110 1123458999999873 332211 111222334577899999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
+|+|+||+||+++.+|.++|+|||++......... ....++..|+||+++....+++.+|+|++|+.+++++.
T Consensus 148 vH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~-------~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~ 220 (364)
T cd07875 148 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-------TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK 220 (364)
T ss_pred ecCCCCHHHEEECCCCcEEEEeCCCccccCCCCcc-------cCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHh
Confidence 99999999999999999999999999866442111 11236778999999988888889999999999999997
Q ss_pred h
Q 008643 345 N 345 (558)
Q Consensus 345 ~ 345 (558)
+
T Consensus 221 g 221 (364)
T cd07875 221 G 221 (364)
T ss_pred C
Confidence 4
No 121
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.87 E-value=5.9e-22 Score=202.30 Aligned_cols=191 Identities=21% Similarity=0.254 Sum_probs=138.9
Q ss_pred hhhcccCcceeeeeeccEEEEEEEcCCCcEEEEEEecCCChh---hHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHH
Q 008643 100 AVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEP---IIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEF 176 (558)
Q Consensus 100 ~~f~~~~~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~---~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~ 176 (558)
+.+..+ ..||+|++|.||++....+|..||||........ .+..++.+++
T Consensus 22 ~~~~~~--~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~------------------------- 74 (292)
T cd06658 22 EYLDSF--IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMR------------------------- 74 (292)
T ss_pred HHHhhh--hcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHH-------------------------
Confidence 444444 5799999999999999888999999986432111 1111111111
Q ss_pred HHhhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHH
Q 008643 177 GEKLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAAL 256 (558)
Q Consensus 177 ~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L 256 (558)
.+ .|+|+.++.+.+...+ ..+++|||++|+++.++........+....+..+++.++
T Consensus 75 ------~l----~h~~ii~~~~~~~~~~-------------~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~l 131 (292)
T cd06658 75 ------DY----HHENVVDMYNSYLVGD-------------ELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRAL 131 (292)
T ss_pred ------hC----CCCcHHHHHHheecCC-------------eEEEEEeCCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 11 2677777777665443 349999999999987754322223334455778999999
Q ss_pred HHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHH
Q 008643 257 RQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPII 336 (558)
Q Consensus 257 ~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~ 336 (558)
.+||+.|++|+|+||.||+++.+++++++|||++..+....... ....++..|++|+.......+..+|+|++|
T Consensus 132 ~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG 205 (292)
T cd06658 132 SYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKR------KSLVGTPYWMAPEVISRLPYGTEVDIWSLG 205 (292)
T ss_pred HHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccC------ceeecCccccCHHHHccCCCCchhhHHHHH
Confidence 99999999999999999999999999999999987654322110 112357789999998877788899999999
Q ss_pred HHHHHHHHhh
Q 008643 337 PALEAIWQNS 346 (558)
Q Consensus 337 ~~l~~l~~~~ 346 (558)
..+++++.+.
T Consensus 206 vil~el~~g~ 215 (292)
T cd06658 206 IMVIEMIDGE 215 (292)
T ss_pred HHHHHHHhCC
Confidence 9999999753
No 122
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.87 E-value=6.8e-22 Score=197.05 Aligned_cols=234 Identities=15% Similarity=0.150 Sum_probs=158.6
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCCh------hhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhh
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIE------PIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKL 180 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~------~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l 180 (558)
.++||.|++|.||+|+...+|+.||+|+...... +.+..++.+++
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~----------------------------- 55 (258)
T cd05578 5 LRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQ----------------------------- 55 (258)
T ss_pred EEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHH-----------------------------
Confidence 3689999999999999988899999998764211 11111111111
Q ss_pred HhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHh-cCCCCHHHHHHHHHHHHHHHH
Q 008643 181 LEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIK-GAGIDVGGFLTVGVSAALRQL 259 (558)
Q Consensus 181 ~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~-~~~~~~~~~~~~~v~~~L~~L 259 (558)
.+ .|+|+..+...+..... .+++|||++|++|.+..... .........+..+++.++.+|
T Consensus 56 --~l----~h~~i~~~~~~~~~~~~-------------~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~l 116 (258)
T cd05578 56 --EL----NHPFLVNLWYSFQDEEN-------------MYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYL 116 (258)
T ss_pred --hC----CCCChHHHHHhhcCCCe-------------EEEEEeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHH
Confidence 11 26777777777665443 49999999999998764333 122223345778899999999
Q ss_pred HHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHH
Q 008643 260 LEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPAL 339 (558)
Q Consensus 260 h~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l 339 (558)
|..|++|+|++|.||+++.++.++++|||.+........ .....++..+++|+.......+..+|+|++|..+
T Consensus 117 h~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~-------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l 189 (258)
T cd05578 117 HSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTL-------TTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTA 189 (258)
T ss_pred HhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCcc-------ccccCCChhhcCHHHHcccCCCCcccchhhHHHH
Confidence 999999999999999999999999999999887765431 1223467789999998877788899999999999
Q ss_pred HHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCCh
Q 008643 340 EAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKF 401 (558)
Q Consensus 340 ~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~~ 401 (558)
++++.+.. ++...+.. ....+.+.........|+.+...+..++.. |+..||+-++
T Consensus 190 ~~l~~g~~--p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~l~~~p~~R~ 245 (258)
T cd05578 190 YECLRGKR--PYRGHSRT-IRDQIRAKQETADVLYPATWSTEAIDAINK---LLERDPQKRL 245 (258)
T ss_pred HHHHhCCC--CCCCCCcc-HHHHHHHHhccccccCcccCcHHHHHHHHH---HccCChhHcC
Confidence 99997532 22222211 112222222223334444444444455444 5666665553
No 123
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.87 E-value=2.4e-22 Score=212.96 Aligned_cols=93 Identities=16% Similarity=0.103 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCC
Q 008643 248 LTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLA 327 (558)
Q Consensus 248 ~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~ 327 (558)
+..+++.+|.|||+.|++|+|+||.||+++.++.++++|||++..+........ .+...+...|++|+....+.++
T Consensus 219 ~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~ 294 (375)
T cd05104 219 FSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVV----KGNARLPVKWMAPESIFNCVYT 294 (375)
T ss_pred HHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcccccc----cCCCCCCcceeChhHhcCCCCC
Confidence 567899999999999999999999999999999999999999987654322110 1112234568999999888899
Q ss_pred CCCCcccHHHHHHHHHH
Q 008643 328 KGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 328 ~~~Di~~l~~~l~~l~~ 344 (558)
..+|+|++|..++++++
T Consensus 295 ~~sDi~slG~~l~ellt 311 (375)
T cd05104 295 FESDVWSYGILLWEIFS 311 (375)
T ss_pred CCCCHHHHHHHHHHHHh
Confidence 99999999999999986
No 124
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.87 E-value=2.7e-22 Score=208.17 Aligned_cols=193 Identities=20% Similarity=0.193 Sum_probs=128.1
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|++|.||+|+.+.+|+.||||+.+......- + . ..+.
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~--~----------------------~--------~~~~----- 47 (338)
T cd07859 5 QEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVS--D----------------------A--------TRIL----- 47 (338)
T ss_pred EEEEeecCCeEEEEEEECCCCCEEEEEEechhhccch--h----------------------H--------HHHH-----
Confidence 3689999999999999988999999998753211100 0 0 0111
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecC----CCceEEEEeeeCCCCCCCHHHHh-cCCCCHHHHHHHHHHHHHHHHHH
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRL----SGSRVLVMEWIDGIRCTDPQAIK-GAGIDVGGFLTVGVSAALRQLLE 261 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~----~~~~vLvmE~i~G~~L~d~~~~~-~~~~~~~~~~~~~v~~~L~~Lh~ 261 (558)
+|... ...+.+.+.+.+..++... ....+++|||++| +|.+..... ....+....+..|++.||.|||+
T Consensus 48 -~E~~~----l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~ 121 (338)
T cd07859 48 -REIKL----LRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHHQFFLYQLLRALKYIHT 121 (338)
T ss_pred -HHHHH----HHhCCCCCEeeecceEeccCCCCCceEEEEEecCCC-CHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHH
Confidence 12221 1222233333333332211 1246899999964 554432211 11233345577899999999999
Q ss_pred CCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc--CCCCCCCCcccHHHHH
Q 008643 262 FGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL--GFLAKGTDVSPIIPAL 339 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~--g~~~~~~Di~~l~~~l 339 (558)
.|++|+|+||+||+++.+|.++|+|||++.......... .......++..|+||++... +.+++.+|+|++|+.+
T Consensus 122 ~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl 198 (338)
T cd07859 122 ANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA---IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIF 198 (338)
T ss_pred CCeecCCCCHHHeEECCCCcEEEccCccccccccccCcc---ccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHH
Confidence 999999999999999999999999999997653321111 00011246778999998865 5677889999999999
Q ss_pred HHHHHh
Q 008643 340 EAIWQN 345 (558)
Q Consensus 340 ~~l~~~ 345 (558)
++++++
T Consensus 199 ~el~tg 204 (338)
T cd07859 199 AEVLTG 204 (338)
T ss_pred HHHHcC
Confidence 999974
No 125
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.87 E-value=3.3e-22 Score=200.27 Aligned_cols=234 Identities=14% Similarity=0.161 Sum_probs=150.3
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChh--hHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhh
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEP--IIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEEL 184 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~--~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~El 184 (558)
.+.||.|++|.||+|..+.+++.||+|+...+... .+..++.+++. +
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~-------------------------------l 59 (263)
T cd05052 11 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKE-------------------------------I 59 (263)
T ss_pred eeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHh-------------------------------C
Confidence 46899999999999999888999999987654211 11111111111 1
Q ss_pred cHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHH--HHHHHHHHHHHHHHHH
Q 008643 185 DYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVG--GFLTVGVSAALRQLLE 261 (558)
Q Consensus 185 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~--~~~~~~v~~~L~~Lh~ 261 (558)
.|+|+.++...+.. ....+++|||++|++|.+...... ...+.. ..+..|++.++.+||.
T Consensus 60 ----~h~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~ 122 (263)
T cd05052 60 ----KHPNLVQLLGVCTR-------------EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 122 (263)
T ss_pred ----CCCChhheEEEEcC-------------CCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 14444444433332 334589999999999987643222 123333 3467899999999999
Q ss_pred CCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHH
Q 008643 262 FGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEA 341 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~ 341 (558)
.|++|+|+||.||+++.++.++++|||++..+........ .....+..|++|+....+..++.+|+|++|+.+++
T Consensus 123 ~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e 197 (263)
T cd05052 123 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH-----AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 197 (263)
T ss_pred CCEeecccCcceEEEcCCCcEEeCCCccccccccceeecc-----CCCCCccccCCHHHhccCCCCchhHHHHHHHHHHH
Confidence 9999999999999999999999999999987654321110 00112456889998888888889999999999999
Q ss_pred HHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 342 IWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 342 l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
+++. ...++...+..++...+ ...++...|..+...++.++.. |+..||+-+
T Consensus 198 l~t~-g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~---cl~~~p~~R 249 (263)
T cd05052 198 IATY-GMSPYPGIDLSQVYELL---EKGYRMERPEGCPPKVYELMRA---CWQWNPSDR 249 (263)
T ss_pred HHcC-CCCCCCCCCHHHHHHHH---HCCCCCCCCCCCCHHHHHHHHH---HccCCcccC
Confidence 9962 11233333333332222 2223334444333334444433 555566544
No 126
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.87 E-value=2e-22 Score=213.52 Aligned_cols=94 Identities=16% Similarity=0.090 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCC
Q 008643 247 FLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFL 326 (558)
Q Consensus 247 ~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~ 326 (558)
.+..+++.+|.|||+.|++|||+||.||+++.++.++|+|||++..+....... ......++..|++|+....+.+
T Consensus 216 ~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~ 291 (374)
T cd05106 216 RFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYV----VKGNARLPVKWMAPESIFDCVY 291 (374)
T ss_pred HHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCccee----eccCCCCccceeCHHHhcCCCC
Confidence 467889999999999999999999999999999999999999998764432111 0111223456899999988889
Q ss_pred CCCCCcccHHHHHHHHHH
Q 008643 327 AKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 327 ~~~~Di~~l~~~l~~l~~ 344 (558)
+..+|+|++|..++++++
T Consensus 292 ~~~~DvwSlGvil~ellt 309 (374)
T cd05106 292 TVQSDVWSYGILLWEIFS 309 (374)
T ss_pred CccccHHHHHHHHHHHHh
Confidence 999999999999999985
No 127
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.87 E-value=1.3e-23 Score=200.67 Aligned_cols=239 Identities=15% Similarity=0.171 Sum_probs=162.4
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH-
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY- 186 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~- 186 (558)
+.||+|.|+.||++..+.+|+.+|+|++.-..-. ..+.+. +.+|...
T Consensus 17 e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~------------------------~~~~e~--------l~rEarIC 64 (355)
T KOG0033|consen 17 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS------------------------ARDFQK--------LEREARIC 64 (355)
T ss_pred HHHccCchHHHHHHHhccchHHHHHHHhhhhhhc------------------------cccHHH--------HHHHHHHH
Confidence 5799999999999999999999999986432110 001111 1112111
Q ss_pred -HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHh-cCCCCHHHHHHHHHHHHHHHHHHCCc
Q 008643 187 -TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIK-GAGIDVGGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 187 -~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~-~~~~~~~~~~~~~v~~~L~~Lh~~Gi 264 (558)
...|+|+.++.+.+... +-++||.|+++|+.|..-+..+ -.++-...-+.+|++.+|.|+|.+||
T Consensus 65 ~~LqHP~IvrL~~ti~~~-------------~~~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~I 131 (355)
T KOG0033|consen 65 RKLQHPNIVRLHDSIQEE-------------SFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGI 131 (355)
T ss_pred HhcCCCcEeehhhhhccc-------------ceeEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 11256666655554443 3459999999999885322111 11233345588999999999999999
Q ss_pred eecCCCCCCEEEecC---CCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRD---GRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEA 341 (558)
Q Consensus 265 ~H~DlhPgNIlv~~d---g~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~ 341 (558)
+|||+||.|+++... .-+|++|||++..++.... .+-..|++.+|+|++++...++..+|+|+-|+.|+-
T Consensus 132 vHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~-------~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfi 204 (355)
T KOG0033|consen 132 VHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEA-------WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYI 204 (355)
T ss_pred eeccCChhheeeeeccCCCceeecccceEEEeCCccc-------cccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHH
Confidence 999999999999643 4699999999999984321 234568999999999999999999999999999999
Q ss_pred HHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCChhH
Q 008643 342 IWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKFLE 403 (558)
Q Consensus 342 l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~~~~ 403 (558)
++.++. |+.+-+-..+.+++.+-.++++-+-=+..+.-.|+++.- .+.+||.-+|..
T Consensus 205 LL~G~~--PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~Lvrr---ML~~dP~kRIta 261 (355)
T KOG0033|consen 205 LLVGYP--PFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRR---MLTVNPKKRITA 261 (355)
T ss_pred HHhCCC--CCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHH---HhccChhhhccH
Confidence 998654 333434445555555444444432212344455555544 566788777643
No 128
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.87 E-value=4.3e-22 Score=210.42 Aligned_cols=192 Identities=14% Similarity=0.157 Sum_probs=129.0
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|+||+||+|+...+|+.||||+.......... .+.+.+|+..
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~--------------------------------~~~~~~E~~~ 52 (372)
T cd07853 5 DRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVS--------------------------------CKRVFRELKM 52 (372)
T ss_pred cceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHH--------------------------------HHHHHHHHHH
Confidence 47899999999999999889999999987532211000 0011122211
Q ss_pred H--HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCC--HHHHHHHHHHHHHHHHHHC
Q 008643 187 T--LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGID--VGGFLTVGVSAALRQLLEF 262 (558)
Q Consensus 187 ~--~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~--~~~~~~~~v~~~L~~Lh~~ 262 (558)
. ..|+|+.++.+.+..... ......+++|||+.+ ++.+... ....++ ....+..|++.||.|||+.
T Consensus 53 l~~l~h~niv~~~~~~~~~~~--------~~~~~~~lv~e~~~~-~l~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~ 122 (372)
T cd07853 53 LCFFKHDNVLSALDILQPPHI--------DPFEEIYVVTELMQS-DLHKIIV-SPQPLSSDHVKVFLYQILRGLKYLHSA 122 (372)
T ss_pred HHhCCCCCcCCHhheecCCCc--------cccceEEEEeecccc-CHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 1 125666666665543321 011245899999975 4433221 112233 3445778999999999999
Q ss_pred CceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-CCCCCCCCcccHHHHHHH
Q 008643 263 GLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-GFLAKGTDVSPIIPALEA 341 (558)
Q Consensus 263 Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-g~~~~~~Di~~l~~~l~~ 341 (558)
|++|+|+||+||+++.+|.++|+|||++........... ....++..|++|+.+.. ..++..+|+|++|+.+++
T Consensus 123 ~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~e 197 (372)
T cd07853 123 GILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHM-----TQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAE 197 (372)
T ss_pred CeeCCCCChHHEEECCCCCEEeccccceeecccCccccC-----CCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHH
Confidence 999999999999999999999999999876543221110 01124667889998765 345778999999999999
Q ss_pred HHHh
Q 008643 342 IWQN 345 (558)
Q Consensus 342 l~~~ 345 (558)
++.+
T Consensus 198 l~~g 201 (372)
T cd07853 198 LLGR 201 (372)
T ss_pred HHcC
Confidence 9874
No 129
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.87 E-value=8.1e-22 Score=211.35 Aligned_cols=185 Identities=22% Similarity=0.218 Sum_probs=133.6
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCCh--hhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhh
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIE--PIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEEL 184 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~--~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~El 184 (558)
.+.||+|+||||-+|.+++||+.||||+++.... .+...++.+|..+
T Consensus 191 ~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~l------------------------------- 239 (586)
T KOG0667|consen 191 LEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELL------------------------------- 239 (586)
T ss_pred EEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHH-------------------------------
Confidence 5789999999999999999999999999876532 2222222222222
Q ss_pred cHHHHHHHHHHHHHhcCCCCCeeeceeee--cCCCceEEEEeeeCCCCCCCHHHHhcC-CC--CHHHHHHHHHHHHHHHH
Q 008643 185 DYTLEARNMEDFLENFKDDPTVKIPRVYK--RLSGSRVLVMEWIDGIRCTDPQAIKGA-GI--DVGGFLTVGVSAALRQL 259 (558)
Q Consensus 185 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~vLvmE~i~G~~L~d~~~~~~~-~~--~~~~~~~~~v~~~L~~L 259 (558)
.+ ........+.+.+. .+.+..+||.|.++ .+|.++.+..+. |+ ...+.+..|++.+|..|
T Consensus 240 ------------n~-~d~~~~~n~Vrm~d~F~fr~HlciVfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L 305 (586)
T KOG0667|consen 240 ------------NK-HDPDDKYNIVRMLDYFYFRNHLCIVFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFL 305 (586)
T ss_pred ------------hc-cCCCCCeeEEEeeeccccccceeeeehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 11 01122223333332 33556699999985 677776554443 44 34466889999999999
Q ss_pred HHCCceecCCCCCCEEEecC--CCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHH
Q 008643 260 LEFGLFHGDPHPGNIFAMRD--GRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIP 337 (558)
Q Consensus 260 h~~Gi~H~DlhPgNIlv~~d--g~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~ 337 (558)
|+.||+||||||+|||+..- .+||++|||.+...++..- .++ .+--|-|||++-.+.+...+|+|++||
T Consensus 306 ~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vy-tYi--------QSRfYRAPEVILGlpY~~~IDmWSLGC 376 (586)
T KOG0667|consen 306 HELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVY-TYI--------QSRFYRAPEVILGLPYDTAIDMWSLGC 376 (586)
T ss_pred HhCCeeeccCChhheeeccCCcCceeEEecccccccCCcce-eee--------eccccccchhhccCCCCCccceeehhh
Confidence 99999999999999999754 4799999999998776432 222 233456888888888899999999999
Q ss_pred HHHHHHHh
Q 008643 338 ALEAIWQN 345 (558)
Q Consensus 338 ~l~~l~~~ 345 (558)
++.|++.+
T Consensus 377 IlAEL~tG 384 (586)
T KOG0667|consen 377 ILAELFTG 384 (586)
T ss_pred hHHhHhcC
Confidence 99999985
No 130
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.87 E-value=4.3e-22 Score=209.28 Aligned_cols=192 Identities=18% Similarity=0.163 Sum_probs=128.5
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|+||.||+|+.+.+|+.||||+.......... ...+.+|+..
T Consensus 26 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~--------------------------------~~~~~~E~~~ 73 (359)
T cd07876 26 LKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTH--------------------------------AKRAYRELVL 73 (359)
T ss_pred EEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhH--------------------------------HHHHHHHHHH
Confidence 47999999999999999889999999987543211000 0011111111
Q ss_pred H--HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHCCc
Q 008643 187 T--LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 187 ~--~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi 264 (558)
. ..|+|+.++...+.....+ ......+++|||++|..+... . ..........+..|++.||.|||++|+
T Consensus 74 l~~l~h~niv~~~~~~~~~~~~-------~~~~~~~lv~e~~~~~l~~~~-~-~~~~~~~~~~~~~qi~~~L~~LH~~~i 144 (359)
T cd07876 74 LKCVNHKNIISLLNVFTPQKSL-------EEFQDVYLVMELMDANLCQVI-H-MELDHERMSYLLYQMLCGIKHLHSAGI 144 (359)
T ss_pred HHhCCCCCEeeeeeeeccCCCc-------cccceeEEEEeCCCcCHHHHH-h-ccCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 0 0134444433332211110 112345899999987432211 1 111222334577899999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
+|+|+||+||+++.+|.++|+|||++......... ....++..|++|+.+....++..+|+|++|+.+++++.
T Consensus 145 vHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~-------~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~t 217 (359)
T cd07876 145 IHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMM-------TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVK 217 (359)
T ss_pred ccCCCCHHHEEECCCCCEEEecCCCccccccCccC-------CCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHh
Confidence 99999999999999999999999998765432110 11235677899999888788889999999999999997
Q ss_pred hh
Q 008643 345 NS 346 (558)
Q Consensus 345 ~~ 346 (558)
+.
T Consensus 218 g~ 219 (359)
T cd07876 218 GS 219 (359)
T ss_pred CC
Confidence 53
No 131
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.87 E-value=2.3e-21 Score=196.80 Aligned_cols=192 Identities=20% Similarity=0.172 Sum_probs=129.3
Q ss_pred cceeeeeeccEEEEEEEcC-CCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhc
Q 008643 107 SQTIAAASLGQVYRATLRE-TGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELD 185 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~-~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld 185 (558)
.+.||+|+||.||+|+... +|+.||||+.+......-. ...
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~--------------------------------~~~------ 47 (290)
T cd07862 6 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGM--------------------------------PLS------ 47 (290)
T ss_pred eeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCc--------------------------------hHH------
Confidence 3689999999999999844 5788999987643211000 000
Q ss_pred HHHHHHHHHHHHHhcCCCCCeeeceeee----cCCCceEEEEeeeCCCCCCCHHHHh-cCCCCH--HHHHHHHHHHHHHH
Q 008643 186 YTLEARNMEDFLENFKDDPTVKIPRVYK----RLSGSRVLVMEWIDGIRCTDPQAIK-GAGIDV--GGFLTVGVSAALRQ 258 (558)
Q Consensus 186 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~----~~~~~~vLvmE~i~G~~L~d~~~~~-~~~~~~--~~~~~~~v~~~L~~ 258 (558)
+..|...+.+ ...+.+.+.+.+..++. +..+..+++|||++| ++.+..... ..+.+. ...+..|++.||.|
T Consensus 48 ~~~e~~~l~~-l~~~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~ 125 (290)
T cd07862 48 TIREVAVLRH-LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDF 125 (290)
T ss_pred HHHHHHHHHh-hcccCCCCcceEEEEEecccCCCCCcEEEEEccCCC-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 0111111111 11122333333333321 123457899999975 555443221 122333 34577899999999
Q ss_pred HHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHH
Q 008643 259 LLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPA 338 (558)
Q Consensus 259 Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~ 338 (558)
||+.|++|+|+||+||+++.+|.++++|||++........ .....++..|+||+.+..+..+..+|+|++|+.
T Consensus 126 lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~i 198 (290)
T cd07862 126 LHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-------LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCI 198 (290)
T ss_pred HHHCCeeeCCCCHHHEEEcCCCCEEEccccceEeccCCcc-------cccccccccccChHHHhCCCCCCccchHHHHHH
Confidence 9999999999999999999999999999999987654311 112346788999999988888889999999999
Q ss_pred HHHHHHh
Q 008643 339 LEAIWQN 345 (558)
Q Consensus 339 l~~l~~~ 345 (558)
+++++++
T Consensus 199 l~el~~g 205 (290)
T cd07862 199 FAEMFRR 205 (290)
T ss_pred HHHHHcC
Confidence 9999864
No 132
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.87 E-value=2.6e-22 Score=201.59 Aligned_cols=238 Identities=14% Similarity=0.174 Sum_probs=150.2
Q ss_pred cceeeeeeccEEEEEEEc---CCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhh
Q 008643 107 SQTIAAASLGQVYRATLR---ETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEE 183 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~---~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~E 183 (558)
.+.||+|+||.||+|+++ ..+..||+|+.+.+....... .
T Consensus 10 ~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~---------------------------------~---- 52 (266)
T cd05064 10 ERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRR---------------------------------G---- 52 (266)
T ss_pred eeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHH---------------------------------H----
Confidence 468999999999999874 346789999887653211100 1
Q ss_pred hcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCH--HHHHHHHHHHHHHHHHH
Q 008643 184 LDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDV--GGFLTVGVSAALRQLLE 261 (558)
Q Consensus 184 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~--~~~~~~~v~~~L~~Lh~ 261 (558)
+..|...+ ..+.+.+.+.+...+. .....+++|||++|++|.+.........+. ...+..+++.|+.|||+
T Consensus 53 --~~~e~~~l----~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~ 125 (266)
T cd05064 53 --FLAEALTL----GQFDHSNIVRLEGVIT-RGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSE 125 (266)
T ss_pred --HHHHHHHH----hcCCCCCcCeEEEEEe-cCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 11112111 1123333333333222 245679999999999998765433223333 34567889999999999
Q ss_pred CCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHH
Q 008643 262 FGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEA 341 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~ 341 (558)
.|++|+|+||.||+++.++.++++|||............ .....++..|++|+....+..+..+|+|++|+.+++
T Consensus 126 ~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~e 200 (266)
T cd05064 126 MGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYT-----TMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWE 200 (266)
T ss_pred CCEeeccccHhhEEEcCCCcEEECCCcccccccccchhc-----ccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHH
Confidence 999999999999999999999999999876543221110 001123456889999988888999999999999999
Q ss_pred HHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 342 IWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 342 l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
++.. ...++...+..++...+ ........|+.+...++.++.. |+..+|+-+
T Consensus 201 ll~~-g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~---c~~~~p~~R 252 (266)
T cd05064 201 VMSY-GERPYWDMSGQDVIKAV---EDGFRLPAPRNCPNLLHQLMLD---CWQKERGER 252 (266)
T ss_pred HhcC-CCCCcCcCCHHHHHHHH---HCCCCCCCCCCCCHHHHHHHHH---HcCCCchhC
Confidence 7742 12233334433333322 2223344455444445555543 566666544
No 133
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.87 E-value=2.8e-22 Score=213.53 Aligned_cols=248 Identities=19% Similarity=0.213 Sum_probs=183.0
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
-.+|+|.||.||-|+++.+....|||-+...- +++.+-+++|+.+.
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekd----------------------------------sr~~QPLhEEIaLH 626 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKD----------------------------------SREVQPLHEEIALH 626 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeeccccc----------------------------------chhhccHHHHHHHH
Confidence 37999999999999999898999999653211 12223455665553
Q ss_pred --HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC----CCCHHHHHHHHHHHHHHHHHH
Q 008643 188 --LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA----GIDVGGFLTVGVSAALRQLLE 261 (558)
Q Consensus 188 --~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~----~~~~~~~~~~~v~~~L~~Lh~ 261 (558)
..|+|++++.+.+..+..+ -+.||-++||+|+++...+=. +.....+|..||+.||+|||+
T Consensus 627 ~~LrHkNIVrYLGs~senGf~-------------kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHe 693 (1226)
T KOG4279|consen 627 STLRHKNIVRYLGSVSENGFF-------------KIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHE 693 (1226)
T ss_pred HHHhhHhHHHHhhccCCCCeE-------------EEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhh
Confidence 4699999999998777665 789999999999987543222 234456799999999999999
Q ss_pred CCceecCCCCCCEEEec-CCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCC--CCCCCCcccHHHH
Q 008643 262 FGLFHGDPHPGNIFAMR-DGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGF--LAKGTDVSPIIPA 338 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~-dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~--~~~~~Di~~l~~~ 338 (558)
+.|+|||+|-.|+||+. .|.+||.|||.++++..-+. ...++.|+..||||+++..|. +++.+|+|++|++
T Consensus 694 n~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP------~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT 767 (1226)
T KOG4279|consen 694 NKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINP------CTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCT 767 (1226)
T ss_pred cceeeccccCCcEEEeeccceEEecccccchhhccCCc------cccccccchhhhChHhhccCCcCCCchhhhhhccce
Confidence 99999999999999975 69999999999988753221 123456899999999999986 4566899999999
Q ss_pred HHHHHHhhcCCCCCCCCHHHHHHH-HHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCChhHhhhHHHHHHhhcCC
Q 008643 339 LEAIWQNSSGKGLADFNFRSVTGQ-FNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKFLEVAYPYVAKRLLTDP 417 (558)
Q Consensus 339 l~~l~~~~~~~~~~~~~~~~l~~~-l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~~~~~a~p~v~~~ll~~~ 417 (558)
+-+|-++. .|+-+. +.-... |.--+++-+..+|.+++.-.|+++ .++..|+-.-.+.|...+..-++.+.
T Consensus 768 ~vEMATGr--PPF~El--gspqAAMFkVGmyKvHP~iPeelsaeak~Fi-----lrcFepd~~~R~sA~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 768 MVEMATGR--PPFVEL--GSPQAAMFKVGMYKVHPPIPEELSAEAKNFI-----LRCFEPDPCDRPSAKDLLQDPFLQHN 838 (1226)
T ss_pred eEeeccCC--CCeeec--CChhHhhhhhcceecCCCCcHHHHHHHHHHH-----HHHcCCCcccCccHHHhccCcccccC
Confidence 98887632 122211 111222 223367777899999999999998 55666666555666665555555544
No 134
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.87 E-value=8.6e-23 Score=214.43 Aligned_cols=188 Identities=21% Similarity=0.241 Sum_probs=140.8
Q ss_pred ccC-cceeeeeeccEEEEEEEcCCCcEEEEEEecCCCh---hhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHh
Q 008643 104 KIS-SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIE---PIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEK 179 (558)
Q Consensus 104 ~~~-~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~---~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~ 179 (558)
.|+ ...||.|+||.||+|.+ .+|..||||....... ..+..++.++..+
T Consensus 76 ~Fs~~~~ig~Ggfg~VYkG~l-~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l-------------------------- 128 (361)
T KOG1187|consen 76 NFSESNLIGEGGFGTVYKGVL-SDGTVVAVKRLSSNSGQGEREFLNEVEILSRL-------------------------- 128 (361)
T ss_pred CCchhcceecCCCeEEEEEEE-CCCCEEEEEEecCCCCcchhHHHHHHHHHhcC--------------------------
Confidence 566 46899999999999999 6789999997766542 2233333333222
Q ss_pred hHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC-CCCH--HHHHHHHHHHHH
Q 008643 180 LLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA-GIDV--GGFLTVGVSAAL 256 (558)
Q Consensus 180 l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~-~~~~--~~~~~~~v~~~L 256 (558)
.|+|++++.+.+.+.. ..++||.||+++|+|.+....... .++. .-.+..+++.||
T Consensus 129 ---------~H~Nlv~LlGyC~e~~------------~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL 187 (361)
T KOG1187|consen 129 ---------RHPNLVKLLGYCLEGG------------EHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGL 187 (361)
T ss_pred ---------CCcCcccEEEEEecCC------------ceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 1566655555443322 146999999999999876544333 3343 335778899999
Q ss_pred HHHHHCC---ceecCCCCCCEEEecCCCeEEeecCcccccCh-hhHHHHHHHHHHHH-hcCHHHHHHHHHHcCCCCCCCC
Q 008643 257 RQLLEFG---LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQ-QNKQILIDAVVHAV-NEDYAEMANDFTRLGFLAKGTD 331 (558)
Q Consensus 257 ~~Lh~~G---i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~-~~~~~l~~~~~~~~-~~d~~~~a~~~~~~g~~~~~~D 331 (558)
.|||+.. |+|||+||.|||+|.+.+.|++|||++..... .... ... .|++.|++|++...|.++.++|
T Consensus 188 ~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~~~-------~~~~~gt~gY~~PEy~~~g~lt~KsD 260 (361)
T KOG1187|consen 188 AYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDTSV-------STTVMGTFGYLAPEYASTGKLTEKSD 260 (361)
T ss_pred HHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCccccce-------eeecCCCCccCChhhhccCCcCcccc
Confidence 9999865 99999999999999999999999999966654 2211 111 6899999999999999999999
Q ss_pred cccHHHHHHHHHHhh
Q 008643 332 VSPIIPALEAIWQNS 346 (558)
Q Consensus 332 i~~l~~~l~~l~~~~ 346 (558)
+|+||..+.+++++.
T Consensus 261 VySFGVvllElitgr 275 (361)
T KOG1187|consen 261 VYSFGVVLLELITGR 275 (361)
T ss_pred cccchHHHHHHHhCC
Confidence 999999999998753
No 135
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.87 E-value=9.6e-22 Score=195.15 Aligned_cols=189 Identities=16% Similarity=0.165 Sum_probs=134.2
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|++|.||+|+.+.+|+.|++|............ ..+..|+..
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~--------------------------------~~~~~e~~~ 52 (256)
T cd08529 5 LNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRRER--------------------------------EEAIDEARV 52 (256)
T ss_pred eEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHH--------------------------------HHHHHHHHH
Confidence 368999999999999998899999999875321110000 011111110
Q ss_pred H--HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHh-cCCCCHHH--HHHHHHHHHHHHHHH
Q 008643 187 T--LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIK-GAGIDVGG--FLTVGVSAALRQLLE 261 (558)
Q Consensus 187 ~--~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~-~~~~~~~~--~~~~~v~~~L~~Lh~ 261 (558)
. ..|+|+.++...+.. ....+++|||++|++|.++.... ....+... .+..+++.++.+||+
T Consensus 53 l~~l~h~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~ 119 (256)
T cd08529 53 LAKLDSSYIIRYYESFLD-------------KGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHS 119 (256)
T ss_pred HHhcCCCCeehheeeecc-------------CCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 0 013444443333322 34569999999999998765432 22334333 356789999999999
Q ss_pred CCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHH
Q 008643 262 FGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEA 341 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~ 341 (558)
.|++|+|+||.||+++.+++++++|||++..+....... ....+++.+++|++...+..++.+|+|++|..+++
T Consensus 120 ~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ 193 (256)
T cd08529 120 KKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFA------NTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYE 193 (256)
T ss_pred CCcccCCCCcceEEEeCCCCEEEcccccceeccCccchh------hccccCccccCHHHhcCCCCCCccchHHHHHHHHH
Confidence 999999999999999999999999999988776532211 12346778899999998888899999999999999
Q ss_pred HHHhh
Q 008643 342 IWQNS 346 (558)
Q Consensus 342 l~~~~ 346 (558)
++.+.
T Consensus 194 l~~g~ 198 (256)
T cd08529 194 CCTGK 198 (256)
T ss_pred HHhCC
Confidence 99843
No 136
>PHA02988 hypothetical protein; Provisional
Probab=99.87 E-value=8.6e-22 Score=200.40 Aligned_cols=235 Identities=10% Similarity=0.066 Sum_probs=152.9
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
...||+|++|.||+|.+ +|+.||||+.+...... . ++.+.+.
T Consensus 25 ~~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~---------------------------~----~~~~~~~----- 66 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGH---------------------------K----VLIDITE----- 66 (283)
T ss_pred CeEEeeCCceEEEEEEE--CCEEEEEEecccccccc---------------------------H----HHHHHHH-----
Confidence 46899999999999998 79999999876532110 0 0001111
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeec---CCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHH-
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKR---LSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLE- 261 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~---~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~- 261 (558)
+|...+.+ +.+++-+.+-..+.+ .....+++|||++|++|.+...... ........+..+++.++.++|.
T Consensus 67 -~E~~~l~~----l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~ 141 (283)
T PHA02988 67 -NEIKNLRR----IDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKY 141 (283)
T ss_pred -HHHHHHHh----cCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhc
Confidence 22222222 233333333333322 1345689999999999987654322 1233334567889999999998
Q ss_pred CCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc--CCCCCCCCcccHHHHH
Q 008643 262 FGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL--GFLAKGTDVSPIIPAL 339 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~--g~~~~~~Di~~l~~~l 339 (558)
.|++|+|+||.||+++.+|.++++|||++..++.... ...++..|++|++... +.++..+|+|++|..+
T Consensus 142 ~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~---------~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil 212 (283)
T PHA02988 142 TNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPF---------KNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVL 212 (283)
T ss_pred CCCCCCcCChhhEEECCCCcEEEcccchHhhhccccc---------cccCcccccCHHHhhhccccccchhhhhHHHHHH
Confidence 5999999999999999999999999999876543211 1125677899999875 5678899999999999
Q ss_pred HHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 340 EAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 340 ~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
++++.+. .++...+..++...+.. ....+.+|......++.++.. |+..||+-+
T Consensus 213 ~el~~g~--~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~~l~~li~~---cl~~dp~~R 266 (283)
T PHA02988 213 WEIFTGK--IPFENLTTKEIYDLIIN--KNNSLKLPLDCPLEIKCIVEA---CTSHDSIKR 266 (283)
T ss_pred HHHHHCC--CCCCCCCHHHHHHHHHh--cCCCCCCCCcCcHHHHHHHHH---HhcCCcccC
Confidence 9999843 34444554444333211 223444554444455555554 677777554
No 137
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.87 E-value=3.1e-22 Score=216.54 Aligned_cols=189 Identities=17% Similarity=0.180 Sum_probs=125.8
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|+||.||+|+.+.+|+.||||....... ...+++.+++.+
T Consensus 71 ~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~-~~~~Ei~il~~l--------------------------------- 116 (440)
T PTZ00036 71 GNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQ-YKNRELLIMKNL--------------------------------- 116 (440)
T ss_pred eEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcc-hHHHHHHHHHhc---------------------------------
Confidence 4789999999999999988999999997653311 112233222221
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeec--CCCceEEEEeeeCCCCCCCHHH-Hh--cCCCC--HHHHHHHHHHHHHHHH
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKR--LSGSRVLVMEWIDGIRCTDPQA-IK--GAGID--VGGFLTVGVSAALRQL 259 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~vLvmE~i~G~~L~d~~~-~~--~~~~~--~~~~~~~~v~~~L~~L 259 (558)
.|+|+.++...+.... +.. .....+++|||++|. +.+... .. ....+ ....+..|++.||.||
T Consensus 117 --~h~niv~l~~~~~~~~-------~~~~~~~~~l~lvmE~~~~~-l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yL 186 (440)
T PTZ00036 117 --NHINIIFLKDYYYTEC-------FKKNEKNIFLNVVMEFIPQT-VHKYMKHYARNNHALPLFLVKLYSYQLCRALAYI 186 (440)
T ss_pred --CCCCCcceeeeEeecc-------cccCCCceEEEEEEecCCcc-HHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 1444444332221100 000 011246899999873 333221 11 11222 3345778999999999
Q ss_pred HHCCceecCCCCCCEEEecCC-CeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-CCCCCCCCcccHHH
Q 008643 260 LEFGLFHGDPHPGNIFAMRDG-RIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-GFLAKGTDVSPIIP 337 (558)
Q Consensus 260 h~~Gi~H~DlhPgNIlv~~dg-~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-g~~~~~~Di~~l~~ 337 (558)
|+.||+|||+||+||+++.++ .++|+|||++..+....... ...++..|+||+++.. ..++..+|+|++|+
T Consensus 187 H~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~~~~-------~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGv 259 (440)
T PTZ00036 187 HSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSV-------SYICSRFYRAPELMLGATNYTTHIDLWSLGC 259 (440)
T ss_pred HHCCEecCCcCHHHEEEcCCCCceeeeccccchhccCCCCcc-------cCCCCcCccCHHHhcCCCCCCcHHHHHHHHH
Confidence 999999999999999998765 79999999998765432211 1235778999998754 35678899999999
Q ss_pred HHHHHHHhh
Q 008643 338 ALEAIWQNS 346 (558)
Q Consensus 338 ~l~~l~~~~ 346 (558)
.+++++.+.
T Consensus 260 il~elltG~ 268 (440)
T PTZ00036 260 IIAEMILGY 268 (440)
T ss_pred HHHHHHhCC
Confidence 999999753
No 138
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.86 E-value=2.8e-22 Score=199.44 Aligned_cols=236 Identities=17% Similarity=0.177 Sum_probs=155.3
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||.|++|.||++..+.+|+.||+|..+........ +. +
T Consensus 5 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~---------------------------------~~------~ 45 (255)
T cd08219 5 LRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAV---------------------------------ED------S 45 (255)
T ss_pred EEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHH---------------------------------HH------H
Confidence 36899999999999999889999999987532111000 00 1
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC-CCCH--HHHHHHHHHHHHHHHHHCC
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA-GIDV--GGFLTVGVSAALRQLLEFG 263 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~-~~~~--~~~~~~~v~~~L~~Lh~~G 263 (558)
..|.. ....+.+.+.+.+... .+..+..+++|||++|+++.+....... ..+. ...+..+++.++.+||++|
T Consensus 46 ~~e~~----~l~~l~h~~i~~~~~~-~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~ 120 (255)
T cd08219 46 RKEAV----LLAKMKHPNIVAFKES-FEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKR 120 (255)
T ss_pred HHHHH----HHHhCCCCCcceEEEE-EEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 11111 1222333333333333 2345677999999999988765432221 2232 3446789999999999999
Q ss_pred ceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 008643 264 LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 264 i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~ 343 (558)
++|+|+||.||+++.++.++++|||++..+....... ....++..+++|+.+.....++.+|+|++|..+++++
T Consensus 121 i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~ 194 (255)
T cd08219 121 VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYA------CTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELC 194 (255)
T ss_pred cccCCCCcceEEECCCCcEEEcccCcceeeccccccc------ccccCCccccCHHHHccCCcCchhhhhhhchhheehh
Confidence 9999999999999999999999999988765432211 1234677799999998888889999999999999999
Q ss_pred HhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 344 QNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 344 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
.+.. ++..-+.... ...+.......+|..+...++.++.. |+..||+-+
T Consensus 195 ~g~~--p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~li~~---~l~~~P~~R 243 (255)
T cd08219 195 TLKH--PFQANSWKNL---ILKVCQGSYKPLPSHYSYELRSLIKQ---MFKRNPRSR 243 (255)
T ss_pred hccC--CCCCCCHHHH---HHHHhcCCCCCCCcccCHHHHHHHHH---HHhCCcccC
Confidence 7433 2322233222 22222233333555555555665543 566677655
No 139
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.86 E-value=1.8e-22 Score=206.84 Aligned_cols=189 Identities=17% Similarity=0.150 Sum_probs=127.0
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||.|+||.||+|+.+.+|+.||||+.+........ ..+
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~---------------------------------------~~~ 50 (303)
T cd07869 10 LEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTP---------------------------------------FTA 50 (303)
T ss_pred eeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccc---------------------------------------hhH
Confidence 47899999999999999889999999987643211000 000
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCH--HHHHHHHHHHHHHHHHHCCc
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDV--GGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~--~~~~~~~v~~~L~~Lh~~Gi 264 (558)
.+|.. ....+.+.+.+.+..++. .....+++|||++| ++.+.......+.+. ...+..|++.||.|||+.|+
T Consensus 51 ~~E~~----~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i 124 (303)
T cd07869 51 IREAS----LLKGLKHANIVLLHDIIH-TKETLTLVFEYVHT-DLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYI 124 (303)
T ss_pred HHHHH----HHhhCCCCCcCeEEEEEe-cCCeEEEEEECCCc-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 11111 122223333333333332 24566999999976 443332222222333 34577899999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-CCCCCCCCcccHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-GFLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-g~~~~~~Di~~l~~~l~~l~ 343 (558)
+|+|+||+||+++.+|.++|+|||++.......... ....++..|+||+++.. ...+..+|+|++|+.+++++
T Consensus 125 vH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~ 198 (303)
T cd07869 125 LHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTY------SNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMI 198 (303)
T ss_pred ecCCCCHHHEEECCCCCEEECCCCcceeccCCCccC------CCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHH
Confidence 999999999999999999999999987543221110 11235677999998754 34567789999999999999
Q ss_pred Hhh
Q 008643 344 QNS 346 (558)
Q Consensus 344 ~~~ 346 (558)
.+.
T Consensus 199 ~g~ 201 (303)
T cd07869 199 QGV 201 (303)
T ss_pred hCC
Confidence 753
No 140
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.86 E-value=2.6e-21 Score=199.76 Aligned_cols=251 Identities=22% Similarity=0.250 Sum_probs=160.5
Q ss_pred HHHHHHhCCChHhhhcccCcceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCC
Q 008643 88 NIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGC 167 (558)
Q Consensus 88 ~~ie~elg~~~~~~f~~~~~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~ 167 (558)
.+....++..++..|... +.||+|+||+||+|+...+|+.||+|+.+.......
T Consensus 13 ~~~~~~~~~~~~~~f~~~--~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~------------------------ 66 (317)
T cd06635 13 EIAELFFKEDPEKLFTDL--REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSN------------------------ 66 (317)
T ss_pred HHHHHhcCCCchhhhhhh--heeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCch------------------------
Confidence 345566778888887654 689999999999999988999999998754311100
Q ss_pred ChHHHHHHHHHhhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHH--
Q 008643 168 NAELIVDEFGEKLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVG-- 245 (558)
Q Consensus 168 ~~~~iv~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~-- 245 (558)
+....+. .|.. +...+.+.+.+.+...+. .....+++|||+.| ++.+........++..
T Consensus 67 -------~~~~~~~------~e~~----~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~ 127 (317)
T cd06635 67 -------EKWQDII------KEVK----FLQRIKHPNSIEYKGCYL-REHTAWLVMEYCLG-SASDLLEVHKKPLQEVEI 127 (317)
T ss_pred -------HHHHHHH------HHHH----HHHhCCCCCEEEEEEEEe-eCCeEEEEEeCCCC-CHHHHHHHhcCCCCHHHH
Confidence 0001111 1222 222333333333333332 24567899999986 5555433333334433
Q ss_pred HHHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHH---
Q 008643 246 GFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTR--- 322 (558)
Q Consensus 246 ~~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~--- 322 (558)
..+..+++.++.+||..|++|+|++|+||+++.+|.++++|||++....... ...+++.|++|+.+.
T Consensus 128 ~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~----------~~~~~~~y~aPE~~~~~~ 197 (317)
T cd06635 128 AAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPAN----------SFVGTPYWMAPEVILAMD 197 (317)
T ss_pred HHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCCcc----------cccCCccccChhhhhcCC
Confidence 3467789999999999999999999999999999999999999987655422 123667789999873
Q ss_pred cCCCCCCCCcccHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCC-chhHHHHHHHHHHHHhhhhhcCCCCCh
Q 008643 323 LGFLAKGTDVSPIIPALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRI-PERFSLVIRSLLTQEGICFTLKPDFKF 401 (558)
Q Consensus 323 ~g~~~~~~Di~~l~~~l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l-P~~~~~~~rsl~~legi~~~LdP~~~~ 401 (558)
.+..++.+|+|++|+.+++++.+.. ++...+... .+..+........ ++.+...++.++.. |+..+|+-++
T Consensus 198 ~~~~~~~~Dv~slGvil~el~~g~~--p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~li~~---~l~~~p~~Rp 269 (317)
T cd06635 198 EGQYDGKVDVWSLGITCIELAERKP--PLFNMNAMS---ALYHIAQNESPTLQSNEWSDYFRNFVDS---CLQKIPQDRP 269 (317)
T ss_pred CCCCCccccHHHHHHHHHHHHhCCC--CCCCccHHH---HHHHHHhccCCCCCCccccHHHHHHHHH---HccCCcccCc
Confidence 4567888999999999999997532 222222222 2222222222222 22334445555544 6677777663
No 141
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.86 E-value=4.1e-23 Score=233.13 Aligned_cols=237 Identities=19% Similarity=0.244 Sum_probs=166.6
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEec--CC---ChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQR--PG---IEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLL 181 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~r--p~---~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~ 181 (558)
...||.|-||+||.|....+|+-.|||-++ ++ .-+.+..++.++..+
T Consensus 1240 g~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~l---------------------------- 1291 (1509)
T KOG4645|consen 1240 GNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGL---------------------------- 1291 (1509)
T ss_pred ccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhc----------------------------
Confidence 347999999999999999999999999543 22 122233333333322
Q ss_pred hhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC-CCCHHHHHHHHHHHHHHHHH
Q 008643 182 EELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA-GIDVGGFLTVGVSAALRQLL 260 (558)
Q Consensus 182 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~-~~~~~~~~~~~v~~~L~~Lh 260 (558)
-|+|+++++..=.|.. ..+|-||||+||+|.++...... .+-..+.+..|++.|+.|||
T Consensus 1292 -------nHpNlV~YyGVEvHRe-------------kv~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH 1351 (1509)
T KOG4645|consen 1292 -------NHPNLVRYYGVEVHRE-------------KVYIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLH 1351 (1509)
T ss_pred -------cCccccccCceeecHH-------------HHHHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHH
Confidence 1677766655433333 33799999999999987543322 23345678899999999999
Q ss_pred HCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCC---CCCCCCcccHHH
Q 008643 261 EFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGF---LAKGTDVSPIIP 337 (558)
Q Consensus 261 ~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~---~~~~~Di~~l~~ 337 (558)
++||+||||||.||+++.+|-+|+.|||.+..+...... +...+- -..|++.||||+.+...- .....|+|++||
T Consensus 1352 ~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~-~~~el~-~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGC 1429 (1509)
T KOG4645|consen 1352 EHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQT-MPGELQ-SMMGTPMYMAPEVITGTKGKGHGGAADIWSLGC 1429 (1509)
T ss_pred hcCceecCCCccceeeecCCcEEeecccceeEecCchhc-CCHHHH-hhcCCchhcCchhhcccccCCCCcchhhhcccc
Confidence 999999999999999999999999999999988765322 222222 345899999999987532 234579999999
Q ss_pred HHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 338 ALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 338 ~l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
.+-+|.++.. |+.++ ..-.+-++++...+..++|..++...|.++.. |+.=||..+
T Consensus 1430 VVlEM~tGkr--PW~~~--dne~aIMy~V~~gh~Pq~P~~ls~~g~dFle~---Cl~~dP~~R 1485 (1509)
T KOG4645|consen 1430 VVLEMATGKR--PWAEL--DNEWAIMYHVAAGHKPQIPERLSSEGRDFLEH---CLEQDPKMR 1485 (1509)
T ss_pred eEEEeecCCC--chhhc--cchhHHHhHHhccCCCCCchhhhHhHHHHHHH---HHhcCchhh
Confidence 9999987432 33333 22234456666678889999877666666654 555555433
No 142
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.86 E-value=2.6e-21 Score=191.78 Aligned_cols=187 Identities=17% Similarity=0.158 Sum_probs=131.0
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||+|++|.||+|.. .++..||+|+.+........ .++.
T Consensus 1 ~~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~~~~~~~---------------------------------------~~~~ 40 (250)
T cd05085 1 ELLGKGNFGEVFKGTL-KDKTPVAVKTCKEDLPQELK---------------------------------------IKFL 40 (250)
T ss_pred CccCCCCCceEEEEEe-cCCcEEEEEecCCcCCHHHH---------------------------------------HHHH
Confidence 3689999999999998 58999999987765432111 0122
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHHHHHHHHHHHHCCce
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVGVSAALRQLLEFGLF 265 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~v~~~L~~Lh~~Gi~ 265 (558)
+|...+. .+.+.+.+.+...+ ...+..+++|||++|++|.+.........+.. ..+..++..++.++|..|++
T Consensus 41 ~e~~~l~----~l~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~ 115 (250)
T cd05085 41 SEARILK----QYDHPNIVKLIGVC-TQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCI 115 (250)
T ss_pred HHHHHHH----hCCCCCcCeEEEEE-ecCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 2222222 22333333333333 23456799999999999977643333233333 34567899999999999999
Q ss_pred ecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 266 HGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 266 H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
|+|+||+||+++.++.++++|||++.......... .......+.|++|+....+..+..+|+|++|..+++++.
T Consensus 116 H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~ 189 (250)
T cd05085 116 HRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSS-----SGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFS 189 (250)
T ss_pred ecccChheEEEcCCCeEEECCCccceecccccccc-----CCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhc
Confidence 99999999999999999999999987654321110 001122456889999988888889999999999999986
No 143
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.86 E-value=7.4e-22 Score=195.72 Aligned_cols=238 Identities=18% Similarity=0.239 Sum_probs=152.1
Q ss_pred ceeeeeeccEEEEEEEcCC---CcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhh
Q 008643 108 QTIAAASLGQVYRATLRET---GEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEEL 184 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~---G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~El 184 (558)
+.||+|+||.||+|..... +..|+||+.+......... .+..|
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~---------------------------------~~~~e- 46 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERK---------------------------------DFLKE- 46 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHH---------------------------------HHHHH-
Confidence 4689999999999999655 8899999987653321000 11111
Q ss_pred cHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHh--------cCCCCHH--HHHHHHHHH
Q 008643 185 DYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIK--------GAGIDVG--GFLTVGVSA 254 (558)
Q Consensus 185 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~--------~~~~~~~--~~~~~~v~~ 254 (558)
... ...+.+...+.+..++. .....+++|||++|++|.+..... ....+.. ..+..+++.
T Consensus 47 -----~~~----l~~~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 116 (262)
T cd00192 47 -----ARV----MKKLGHPNVVRLLGVCT-EEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAK 116 (262)
T ss_pred -----HHH----HhhcCCCChheeeeeec-CCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHH
Confidence 111 11222222222222222 245569999999999998765433 1223333 457788999
Q ss_pred HHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCccc
Q 008643 255 ALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSP 334 (558)
Q Consensus 255 ~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~ 334 (558)
++.+||+.|++|+|++|.||+++.++.++++|||.+..+....... ......++..|++|+....+..+..+|+|+
T Consensus 117 al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s 192 (262)
T cd00192 117 GMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYR----KKTGGKLPIRWMAPESLKDGIFTSKSDVWS 192 (262)
T ss_pred HHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccccccc----cccCCCcCccccCHHHhccCCcchhhccHH
Confidence 9999999999999999999999999999999999998776542100 011123567789999998888888999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 335 IIPALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 335 l~~~l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
+|..++++++.- ..++...+...+...+. .......|..+...++.++.. |+..+|+-+
T Consensus 193 lG~il~~l~~~g-~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~li~~---~l~~~p~~R 251 (262)
T cd00192 193 FGVLLWEIFTLG-ATPYPGLSNEEVLEYLR---KGYRLPKPEYCPDELYELMLS---CWQLDPEDR 251 (262)
T ss_pred HHHHHHHHHhcC-CCCCCCCCHHHHHHHHH---cCCCCCCCccCChHHHHHHHH---HccCCcccC
Confidence 999999998731 12333334433333322 233334444444444444433 555566443
No 144
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.86 E-value=8.7e-22 Score=198.86 Aligned_cols=196 Identities=17% Similarity=0.149 Sum_probs=135.8
Q ss_pred hHhhhcccCcceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHH
Q 008643 98 LEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFG 177 (558)
Q Consensus 98 ~~~~f~~~~~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~ 177 (558)
+++.|... +.||+|+||.||+|....+|+.||||+..........
T Consensus 2 ~~~~~~~~--~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~--------------------------------- 46 (277)
T cd06641 2 PEELFTKL--EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEI--------------------------------- 46 (277)
T ss_pred HHHhhhhh--eeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHH---------------------------------
Confidence 34555544 5799999999999999788999999986532111000
Q ss_pred HhhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHH
Q 008643 178 EKLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALR 257 (558)
Q Consensus 178 ~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~ 257 (558)
-++.+|...+ ..+.+...+.+...+ ......+++|||++|+++.++.............+..+++.++.
T Consensus 47 ------~~~~~e~~~l----~~l~h~~iv~~~~~~-~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~ 115 (277)
T cd06641 47 ------EDIQQEITVL----SQCDSPYVTKYYGSY-LKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLD 115 (277)
T ss_pred ------HHHHHHHHHH----HhcCCCCEeEEEEEE-EeCCeEEEEEEeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 0112222222 222333333333322 23456799999999998876533221222223446788999999
Q ss_pred HHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHH
Q 008643 258 QLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIP 337 (558)
Q Consensus 258 ~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~ 337 (558)
+||+.|++|+|+||+||+++.+|.++++|||++..+...... .....++..+++|+....+..+..+|+|++|+
T Consensus 116 ~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ 189 (277)
T cd06641 116 YLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK------RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGI 189 (277)
T ss_pred HHccCCeecCCCCHHhEEECCCCCEEEeecccceecccchhh------hccccCCccccChhhhccCCCCchhhHHHHHH
Confidence 999999999999999999999999999999998876543211 11123566788999888777788899999999
Q ss_pred HHHHHHHh
Q 008643 338 ALEAIWQN 345 (558)
Q Consensus 338 ~l~~l~~~ 345 (558)
.+++++.+
T Consensus 190 ~l~~l~~g 197 (277)
T cd06641 190 TAIELAKG 197 (277)
T ss_pred HHHHHHcC
Confidence 99999874
No 145
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.86 E-value=4.8e-22 Score=198.31 Aligned_cols=195 Identities=16% Similarity=0.158 Sum_probs=134.3
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhh-HHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhc
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPI-IYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELD 185 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~-i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld 185 (558)
.+.||.|++|.||+|....+|++||+|+.+...... ....+ ..
T Consensus 7 ~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~------------------------------~~------ 50 (263)
T cd06625 7 GKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEV------------------------------NA------ 50 (263)
T ss_pred cceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHH------------------------------HH------
Confidence 578999999999999998899999999876542110 00000 01
Q ss_pred HHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHCCc
Q 008643 186 YTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 186 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~~Gi 264 (558)
+.+|...+ ..+.+.+-+.+.. +.......+++|||++|++|.+...... ........+..+++.++.+||+.|+
T Consensus 51 ~~~e~~~l----~~l~~~~i~~~~~-~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i 125 (263)
T cd06625 51 LECEIQLL----KNLQHERIVQYYG-CLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMI 125 (263)
T ss_pred HHHHHHHH----HhCCCCCeeeeEE-EEccCCeEEEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 12222222 2222322222222 2233456799999999999876543221 1223334577899999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
+|+|+||+||+++.+++++|+|||++..+........ ......++..|++|+.......+..+|+|++|..+++++.
T Consensus 126 ~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~ 202 (263)
T cd06625 126 VHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGT---GMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLT 202 (263)
T ss_pred ecCCCCHHHEEEcCCCCEEEeecccceeccccccccc---cccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHh
Confidence 9999999999999999999999999887654221110 0011235667899999888778889999999999999998
Q ss_pred h
Q 008643 345 N 345 (558)
Q Consensus 345 ~ 345 (558)
+
T Consensus 203 g 203 (263)
T cd06625 203 E 203 (263)
T ss_pred C
Confidence 4
No 146
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.86 E-value=4.8e-22 Score=205.97 Aligned_cols=232 Identities=18% Similarity=0.182 Sum_probs=171.3
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
++.||+|-|+.|..|++..+|+.|||||+.......+. ...+++|+..
T Consensus 23 ekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~s--------------------------------t~hlfqEVRC 70 (864)
T KOG4717|consen 23 EKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLS--------------------------------TGHLFQEVRC 70 (864)
T ss_pred hhhhcCCceehhhhhhhhcccceeEEEEecccccchhh--------------------------------hhHHHHHHHH
Confidence 57899999999999999999999999998654221110 1134444432
Q ss_pred H--HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCC--CHHHHHHHHHHHHHHHHHHC
Q 008643 187 T--LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGI--DVGGFLTVGVSAALRQLLEF 262 (558)
Q Consensus 187 ~--~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~--~~~~~~~~~v~~~L~~Lh~~ 262 (558)
. -.|+|++|+++.+.. .++.||++|.=+||+|.|++.....|+ +..+.|+.||..++.|+|..
T Consensus 71 MKLVQHpNiVRLYEViDT-------------QTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqL 137 (864)
T KOG4717|consen 71 MKLVQHPNIVRLYEVIDT-------------QTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQL 137 (864)
T ss_pred HHHhcCcCeeeeeehhcc-------------cceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhh
Confidence 2 135666666555433 566799999999999999887666664 55678999999999999999
Q ss_pred CceecCCCCCCEEEec-CCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcccHHHHHH
Q 008643 263 GLFHGDPHPGNIFAMR-DGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLG-FLAKGTDVSPIIPALE 340 (558)
Q Consensus 263 Gi~H~DlhPgNIlv~~-dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g-~~~~~~Di~~l~~~l~ 340 (558)
.++|||+||+|+.+-+ -|-+|+.|||++-.+.+..+. ...||...|-||+++-.. +-.|.+|+|++|++||
T Consensus 138 HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL-------~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILy 210 (864)
T KOG4717|consen 138 HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKL-------TTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILY 210 (864)
T ss_pred hhhcccCCcceeEEeeecCceEeeeccccccCCCcchh-------hcccchhhccCchhhhcCccCCcchhhhHHHHHHH
Confidence 9999999999997754 599999999999999887654 345789999999887654 5568899999999999
Q ss_pred HHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCC
Q 008643 341 AIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDF 399 (558)
Q Consensus 341 ~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~ 399 (558)
.+..+ ..|+..-|-.+-+.. +.+..+.+|..++.-.|.++.- .+.-||.-
T Consensus 211 MLVCG--q~PFqeANDSETLTm----ImDCKYtvPshvS~eCrdLI~s---MLvRdPkk 260 (864)
T KOG4717|consen 211 MLVCG--QPPFQEANDSETLTM----IMDCKYTVPSHVSKECRDLIQS---MLVRDPKK 260 (864)
T ss_pred HHHhC--CCccccccchhhhhh----hhcccccCchhhhHHHHHHHHH---HHhcCchh
Confidence 88763 334555554443333 4456667888777777777653 34444443
No 147
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.86 E-value=5.1e-22 Score=200.68 Aligned_cols=239 Identities=15% Similarity=0.206 Sum_probs=148.5
Q ss_pred cceeeeeeccEEEEEEEcCCC-----cEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhH
Q 008643 107 SQTIAAASLGQVYRATLRETG-----EDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLL 181 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G-----~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~ 181 (558)
.+.||.|++|.||+|.....+ ..||+|..+......... .+.
T Consensus 10 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~---------------------------------~~~ 56 (283)
T cd05048 10 LEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQ---------------------------------EFR 56 (283)
T ss_pred hhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHH---------------------------------HHH
Confidence 478999999999999985444 679999876543221110 111
Q ss_pred hhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC---------------CCCHH-
Q 008643 182 EELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA---------------GIDVG- 245 (558)
Q Consensus 182 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~---------------~~~~~- 245 (558)
+| ... ...+.+...+.+...+ ......+++|||++|++|.+....... ..+..
T Consensus 57 ~e------i~~----l~~l~h~~i~~~~~~~-~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~ 125 (283)
T cd05048 57 QE------AEL----MSDLQHPNIVCLLGVC-TKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSD 125 (283)
T ss_pred HH------HHH----HHhcCCcccceEEEEE-cCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHH
Confidence 12 221 2222233222222222 224557899999999998775433211 12222
Q ss_pred -HHHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC
Q 008643 246 -GFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLG 324 (558)
Q Consensus 246 -~~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g 324 (558)
..+..+++.++.|||+.|++|+|+||+||+++.++.++|+|||++..+......... ....++..|+||+....+
T Consensus 126 ~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~ 201 (283)
T cd05048 126 FLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQ----SKSLLPVRWMPPEAILYG 201 (283)
T ss_pred HHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcEEECCCcceeecccccccccc----CCCcccccccCHHHhccC
Confidence 346788999999999999999999999999999999999999998765432211000 111235679999998888
Q ss_pred CCCCCCCcccHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 325 FLAKGTDVSPIIPALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 325 ~~~~~~Di~~l~~~l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
.+++.+|+|++|+.++++++. ...++...+..++...+. .......|..+..-++.++.. |+..||+-+
T Consensus 202 ~~~~~sDv~slG~il~el~~~-g~~p~~~~~~~~~~~~i~---~~~~~~~~~~~~~~~~~l~~~---c~~~~p~~R 270 (283)
T cd05048 202 KFTTESDIWSFGVVLWEIFSY-GLQPYYGFSNQEVIEMIR---SRQLLPCPEDCPARVYALMIE---CWNEIPARR 270 (283)
T ss_pred cCchhhhHHHHHHHHHHHHcC-CCCCCCCCCHHHHHHHHH---cCCcCCCcccCCHHHHHHHHH---HccCChhhC
Confidence 889999999999999999861 112333344444333221 222233333333333444433 666666544
No 148
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.86 E-value=1.1e-21 Score=198.78 Aligned_cols=191 Identities=19% Similarity=0.191 Sum_probs=129.6
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChh-----hHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEP-----IIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLL 181 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~-----~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~ 181 (558)
.+.||+|++|.||+|+.+.+|+.||+|+.+..... ....++.+++.+..
T Consensus 5 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~-------------------------- 58 (288)
T cd07863 5 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEA-------------------------- 58 (288)
T ss_pred eeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhh--------------------------
Confidence 36799999999999999889999999987643211 11222222221110
Q ss_pred hhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHh-cCCCCH--HHHHHHHHHHHHHH
Q 008643 182 EELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIK-GAGIDV--GGFLTVGVSAALRQ 258 (558)
Q Consensus 182 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~-~~~~~~--~~~~~~~v~~~L~~ 258 (558)
..|+|+.++.+.+.... .+.....+++|||++| ++.+..... ..+.+. ...+..|++.|+.|
T Consensus 59 ------~~h~ni~~~~~~~~~~~--------~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~ 123 (288)
T cd07863 59 ------FDHPNIVRLMDVCATSR--------TDRETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDF 123 (288)
T ss_pred ------cCCCCeeeeeeeecccc--------CCCCceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHH
Confidence 01333333322221100 0112345899999986 454432221 112333 34577899999999
Q ss_pred HHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHH
Q 008643 259 LLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPA 338 (558)
Q Consensus 259 Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~ 338 (558)
+|+.|++|+|+||+||+++.+|.++++|||++..+...... ....++..|++|+.+..+..+..+|+|++|+.
T Consensus 124 lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~ 196 (288)
T cd07863 124 LHANCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQMAL-------TPVVVTLWYRAPEVLLQSTYATPVDMWSVGCI 196 (288)
T ss_pred HHhCCeecCCCCHHHEEECCCCCEEECccCccccccCcccC-------CCccccccccCchHhhCCCCCCcchhhhHHHH
Confidence 99999999999999999999999999999998766532211 11235677999999988888899999999999
Q ss_pred HHHHHHh
Q 008643 339 LEAIWQN 345 (558)
Q Consensus 339 l~~l~~~ 345 (558)
+++++.+
T Consensus 197 l~~l~~g 203 (288)
T cd07863 197 FAEMFRR 203 (288)
T ss_pred HHHHHhC
Confidence 9999864
No 149
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.86 E-value=4.5e-22 Score=199.15 Aligned_cols=203 Identities=16% Similarity=0.146 Sum_probs=135.6
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
...||.|++|+||+|....+++.||+|+........-. ...-.++.+.+.+|+
T Consensus 5 ~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~-------------------------~~~~~~~~~~~~~e~-- 57 (267)
T cd06628 5 GALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASS-------------------------KDRKRSMLDALAREI-- 57 (267)
T ss_pred cceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccch-------------------------hHHHHHHHHHHHHHH--
Confidence 36899999999999999888999999987643211000 000011111222222
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHCCce
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLEFGLF 265 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~~Gi~ 265 (558)
. +...+.+...+.+.... ......+++|||++|++|.++..... ........+..+++.++.++|+.|++
T Consensus 58 ----~----~l~~l~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~iv 128 (267)
T cd06628 58 ----A----LLKELQHENIVQYLGSS-LDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGII 128 (267)
T ss_pred ----H----HHHhcCCCCeeeEEEEE-EeCCccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 2 22233343333333322 23456789999999998876643221 12233345778999999999999999
Q ss_pred ecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHh
Q 008643 266 HGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 266 H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~ 345 (558)
|+|++|.||+++.++.++++|||++..+.......-.........+...|++|+....+..+..+|+|++|+.+++++++
T Consensus 129 H~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g 208 (267)
T cd06628 129 HRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTG 208 (267)
T ss_pred cccCCHHHEEEcCCCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhC
Confidence 99999999999999999999999998775321100000000112356778999998888888889999999999999974
No 150
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.86 E-value=8.2e-22 Score=201.36 Aligned_cols=184 Identities=20% Similarity=0.251 Sum_probs=132.4
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChh---hHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhh
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEP---IIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEEL 184 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~---~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~El 184 (558)
..||+|++|+||+|..+.+|+.||||+.+..... .+..++.+++. +
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~-------------------------------l 74 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRD-------------------------------Y 74 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHh-------------------------------c
Confidence 5699999999999999889999999986432111 11111111111 1
Q ss_pred cHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHCCc
Q 008643 185 DYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 185 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi 264 (558)
.|+|+.++.+.+.. ....+++|||++|++|.++........+....+..+++.++.+||+.|+
T Consensus 75 ----~h~~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~gi 137 (292)
T cd06657 75 ----QHENVVEMYNSYLV-------------GDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGV 137 (292)
T ss_pred ----CCcchhheeeEEEe-------------CCEEEEEEecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 14444444443332 3445899999999998775432222333444577899999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
+|+|+||+||+++.+|.++++|||++..+....... ....+++.+++|+....+..++.+|+|++|..++++++
T Consensus 138 vH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~t 211 (292)
T cd06657 138 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR------KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD 211 (292)
T ss_pred ecCCCCHHHEEECCCCCEEEcccccceecccccccc------cccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHh
Confidence 999999999999999999999999987765432211 11235677899998887777888999999999999997
Q ss_pred h
Q 008643 345 N 345 (558)
Q Consensus 345 ~ 345 (558)
+
T Consensus 212 g 212 (292)
T cd06657 212 G 212 (292)
T ss_pred C
Confidence 4
No 151
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.86 E-value=1.4e-21 Score=195.10 Aligned_cols=188 Identities=19% Similarity=0.164 Sum_probs=129.5
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
++||.|++|.||+|+.+.+|+.||||+.+......... . ..+ .
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~------------------------------~-~~~------~ 44 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQ------------------------------V-TNV------K 44 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHH------------------------------H-HHH------H
Confidence 57999999999999998899999999876431100000 0 000 0
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHCCcee
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLEFGLFH 266 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~~Gi~H 266 (558)
.|.. .......+.+.+.+...+. .....+++|||++|++|.++..... ........+..|++.+|.++|..|++|
T Consensus 45 ~e~~---~~~~~~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H 120 (260)
T cd05611 45 AERA---IMMIQGESPYVAKLYYSFQ-SKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIH 120 (260)
T ss_pred HHHH---HHhhcCCCCCeeeeeeeEE-cCCeEEEEEeccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 0000 0111112222222222222 2345699999999999987643221 122334457789999999999999999
Q ss_pred cCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHhh
Q 008643 267 GDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNS 346 (558)
Q Consensus 267 ~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~~ 346 (558)
+|++|.||+++.++.++++|||++...... ....++..|++|+....+..+..+|+|++|..+++++.+.
T Consensus 121 ~dl~p~nil~~~~~~~~l~dfg~~~~~~~~----------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~ 190 (260)
T cd05611 121 RDIKPENLLIDQTGHLKLTDFGLSRNGLEN----------KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGY 190 (260)
T ss_pred CCCCHHHeEECCCCcEEEeecccceecccc----------ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCC
Confidence 999999999999999999999988754431 1224677788999888777788899999999999999743
No 152
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.86 E-value=1.6e-21 Score=193.63 Aligned_cols=189 Identities=15% Similarity=0.154 Sum_probs=131.3
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|++|+||+|+.+.+|+.|++|+........... +..+.+..|++.
T Consensus 5 ~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~-----------------------------~~~~~~~~e~~~ 55 (258)
T cd06632 5 GELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQ-----------------------------EAVKQLEQEIAL 55 (258)
T ss_pred cceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccch-----------------------------HHHHHHHHHHHH
Confidence 478999999999999997799999999875432110000 000111222211
Q ss_pred HH--HHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHHHHHHHHHHHHC
Q 008643 187 TL--EARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVGVSAALRQLLEF 262 (558)
Q Consensus 187 ~~--Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~v~~~L~~Lh~~ 262 (558)
.. .|+|+.++...+.+ ....+++|||++|++|.++..... ..+.. ..+..+++.++.+||+.
T Consensus 56 l~~~~h~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~ 121 (258)
T cd06632 56 LSKLQHPNIVQYLGTERE-------------EDNLYIFLELVPGGSLAKLLKKYG-SFPEPVIRLYTRQILLGLEYLHDR 121 (258)
T ss_pred HHhcCCCCchheeeeEec-------------CCeEEEEEEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 10 13344443332222 345589999999999877643221 23333 34677899999999999
Q ss_pred CceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCC-CCCCCCcccHHHHHHH
Q 008643 263 GLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGF-LAKGTDVSPIIPALEA 341 (558)
Q Consensus 263 Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~-~~~~~Di~~l~~~l~~ 341 (558)
|++|+|++|+||+++.++.++++|||++........ .....++..+++|+....+. .+..+|+|++|..+++
T Consensus 122 ~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~-------~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~ 194 (258)
T cd06632 122 NTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSF-------AKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLE 194 (258)
T ss_pred CcccCCCCHHHEEECCCCCEEEccCccceecccccc-------ccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHH
Confidence 999999999999999999999999999887654331 11234677788998887665 7788999999999999
Q ss_pred HHHh
Q 008643 342 IWQN 345 (558)
Q Consensus 342 l~~~ 345 (558)
++.+
T Consensus 195 l~~g 198 (258)
T cd06632 195 MATG 198 (258)
T ss_pred HHhC
Confidence 9974
No 153
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.86 E-value=1.1e-21 Score=197.26 Aligned_cols=231 Identities=17% Similarity=0.158 Sum_probs=152.5
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCCh------hhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhh
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIE------PIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKL 180 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~------~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l 180 (558)
.++||+|++|+||+|+.+.+|+.||+|+..+... ..+..+..+++.
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~---------------------------- 57 (280)
T cd05581 6 GKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTR---------------------------- 57 (280)
T ss_pred eeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHh----------------------------
Confidence 4689999999999999988999999999764211 011111111111
Q ss_pred HhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHh-cCCCCHHHHHHHHHHHHHHHH
Q 008643 181 LEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIK-GAGIDVGGFLTVGVSAALRQL 259 (558)
Q Consensus 181 ~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~-~~~~~~~~~~~~~v~~~L~~L 259 (558)
+ ..|+|+.++.+.+.+.. ..+++|||++|++|.+..... .........+..+++.++.+|
T Consensus 58 ---l---~~~~~i~~~~~~~~~~~-------------~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~L 118 (280)
T cd05581 58 ---L---NGHPGIIKLYYTFQDEE-------------NLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYL 118 (280)
T ss_pred ---c---ccCCCchhHHHHhcCCc-------------eEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 1 12667777777665544 348999999999997754322 123334455778999999999
Q ss_pred HHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHH--------------HHHHHHHhcCHHHHHHHHHHcCC
Q 008643 260 LEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILI--------------DAVVHAVNEDYAEMANDFTRLGF 325 (558)
Q Consensus 260 h~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~--------------~~~~~~~~~d~~~~a~~~~~~g~ 325 (558)
|+.|++|+|+||+||+++.+|+++++|||++..+......... ........++..+++|+....+.
T Consensus 119 h~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~ 198 (280)
T cd05581 119 HSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKP 198 (280)
T ss_pred HHCCeeecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCC
Confidence 9999999999999999999999999999999877654321000 00011223567788999888888
Q ss_pred CCCCCCcccHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHH
Q 008643 326 LAKGTDVSPIIPALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLL 386 (558)
Q Consensus 326 ~~~~~Di~~l~~~l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~ 386 (558)
.+..+|+|++|..+++++.+.. ++...+.......+.......+..+|+.+..+++.++
T Consensus 199 ~~~~~Di~slG~~l~~l~~g~~--p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 257 (280)
T cd05581 199 AGKSSDLWALGCIIYQMLTGKP--PFRGSNEYLTFQKILKLEYSFPPNFPPDAKDLIEKLL 257 (280)
T ss_pred CChhhhHHHHHHHHHHHHhCCC--CCCCccHHHHHHHHHhcCCCCCCccCHHHHHHHHHHh
Confidence 8888999999999999997432 2222222222222222222334445555555555433
No 154
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.86 E-value=7.9e-22 Score=202.65 Aligned_cols=188 Identities=16% Similarity=0.102 Sum_probs=126.3
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|+||.||+|+.+.+++.||||+.+......... . +
T Consensus 11 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~---------------------------------~------~ 51 (309)
T cd07872 11 LEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPC---------------------------------T------A 51 (309)
T ss_pred EEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcch---------------------------------h------H
Confidence 468999999999999998899999999876432110000 0 0
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCC--HHHHHHHHHHHHHHHHHHCCc
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGID--VGGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~--~~~~~~~~v~~~L~~Lh~~Gi 264 (558)
.+|.. ....+.+.+.+.+...+. .....+++|||+++ .+.+.........+ ....+..|++.+|.|||+.|+
T Consensus 52 ~~E~~----~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i 125 (309)
T cd07872 52 IREVS----LLKDLKHANIVTLHDIVH-TDKSLTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKV 125 (309)
T ss_pred HHHHH----HHHhCCCCCcceEEEEEe-eCCeEEEEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 11111 111222333333333322 24556999999986 44433222222223 334567899999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-CCCCCCCCcccHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-GFLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-g~~~~~~Di~~l~~~l~~l~ 343 (558)
+|+|+||+||+++.+|.++++|||++.......... ....++..|++|+.... +..+..+|+|++|+.+++++
T Consensus 126 vH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~ 199 (309)
T cd07872 126 LHRDLKPQNLLINERGELKLADFGLARAKSVPTKTY------SNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMA 199 (309)
T ss_pred ecCCCCHHHEEECCCCCEEECccccceecCCCcccc------ccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 999999999999999999999999987654322110 01124677889988764 44677899999999999999
Q ss_pred Hh
Q 008643 344 QN 345 (558)
Q Consensus 344 ~~ 345 (558)
++
T Consensus 200 tg 201 (309)
T cd07872 200 SG 201 (309)
T ss_pred hC
Confidence 75
No 155
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.86 E-value=1.1e-21 Score=201.14 Aligned_cols=239 Identities=16% Similarity=0.143 Sum_probs=174.2
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||.|+||.||-++.+.||+-+|+|...... ++ ++ ..|---.
T Consensus 191 RvlGkGGFGEV~acqvraTGKMYAcKkL~KKR---iK------kr----------------------------~ge~maL 233 (591)
T KOG0986|consen 191 RVLGKGGFGEVCACQVRATGKMYACKKLDKKR---IK------KR----------------------------KGETMAL 233 (591)
T ss_pred EEEecccccceeEEEEecchhhHHHHHHHHHH---HH------Hh----------------------------hhhHHhh
Confidence 68999999999999999999999999643210 00 00 0011112
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHH-HHhcCCCCH--HHHHHHHHHHHHHHHHHCCc
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQ-AIKGAGIDV--GGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~-~~~~~~~~~--~~~~~~~v~~~L~~Lh~~Gi 264 (558)
+|...+.+. +.+.|+.-..-.+.....+|||..|+||+|.-.+ .....|.+. ..+|..+|++||+.||..+|
T Consensus 234 nEk~iL~kV-----~s~FiVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~i 308 (591)
T KOG0986|consen 234 NEKQILEKV-----SSPFIVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRI 308 (591)
T ss_pred HHHHHHHHh-----ccCcEEEEeeeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcce
Confidence 333333333 3334433333345567789999999999996432 233345544 45788899999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
+.||+||+|||+|+.|++.|+|.|++..+++..... --.|+..||||+++..+.++..+|.|++|+.||+|+.
T Consensus 309 VYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~~-------~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~ 381 (591)
T KOG0986|consen 309 VYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPIR-------GRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIA 381 (591)
T ss_pred eeccCChhheeeccCCCeEeeccceEEecCCCCccc-------cccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHc
Confidence 999999999999999999999999999998765432 1148999999999999999999999999999999997
Q ss_pred hhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 345 NSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 345 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
+.. |+....-+.--.++.+.+.+.+...|..|+.-.|++... .+.-||+.+
T Consensus 382 G~s--PFr~~KeKvk~eEvdrr~~~~~~ey~~kFS~eakslc~~---LL~Kdp~~R 432 (591)
T KOG0986|consen 382 GHS--PFRQRKEKVKREEVDRRTLEDPEEYSDKFSEEAKSLCEG---LLTKDPEKR 432 (591)
T ss_pred ccC--chhhhhhhhhHHHHHHHHhcchhhcccccCHHHHHHHHH---HHccCHHHh
Confidence 432 222222222234677778888889999999999998755 566677544
No 156
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.86 E-value=8.3e-22 Score=208.61 Aligned_cols=197 Identities=17% Similarity=0.219 Sum_probs=140.2
Q ss_pred hHhhhcccC-cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHH
Q 008643 98 LEAVFSKIS-SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEF 176 (558)
Q Consensus 98 ~~~~f~~~~-~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~ 176 (558)
|+..++++. .+.||+|+||.||||++. .+||||+..-.-.. ++-
T Consensus 387 WeIp~~ev~l~~rIGsGsFGtV~Rg~wh---GdVAVK~Lnv~~pt--------------------------------~~q 431 (678)
T KOG0193|consen 387 WEIPPEEVLLGERIGSGSFGTVYRGRWH---GDVAVKLLNVDDPT--------------------------------PEQ 431 (678)
T ss_pred cccCHHHhhccceeccccccceeecccc---cceEEEEEecCCCC--------------------------------HHH
Confidence 334444444 578999999999999993 38999987532111 011
Q ss_pred HHhhHhhhcHH--HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHHH
Q 008643 177 GEKLLEELDYT--LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVGV 252 (558)
Q Consensus 177 ~~~l~~Eld~~--~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~v 252 (558)
.+.+..|+... ..|.|+.-|.+.+-.++. .+|+.||+|-+|.......+...+.. ..+.+|+
T Consensus 432 lqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~--------------AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQi 497 (678)
T KOG0193|consen 432 LQAFKNEVAVLKKTRHENILLFMGACMNPPL--------------AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQI 497 (678)
T ss_pred HHHHHHHHHHHhhcchhhheeeehhhcCCce--------------eeeehhccCchhhhhccchhhhhhHHHHHHHHHHH
Confidence 11222232211 137788888777765542 58999999999987766555544444 4578899
Q ss_pred HHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCC---CCCC
Q 008643 253 SAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGF---LAKG 329 (558)
Q Consensus 253 ~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~---~~~~ 329 (558)
+.|+.|||..+|+|+|+|..|||+.++++|+|.|||++..-..-... .-+..-.+..-|||||+++++- +++.
T Consensus 498 aqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~----~q~~qp~gsilwmAPEvIRmqd~nPfS~q 573 (678)
T KOG0193|consen 498 AQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGE----QQLEQPHGSLLWMAPEVIRMQDDNPFSFQ 573 (678)
T ss_pred HHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeeeeeccc----cccCCCccchhhhcHHHHhhcccCCCCcc
Confidence 99999999999999999999999999999999999998643211100 0011234677899999999865 4567
Q ss_pred CCcccHHHHHHHHHHhhc
Q 008643 330 TDVSPIIPALEAIWQNSS 347 (558)
Q Consensus 330 ~Di~~l~~~l~~l~~~~~ 347 (558)
+|+|+||..+|+++++..
T Consensus 574 SDVYaFGiV~YELltg~l 591 (678)
T KOG0193|consen 574 SDVYAFGIVWYELLTGEL 591 (678)
T ss_pred cchhhhhHHHHHHHhCcC
Confidence 899999999999998644
No 157
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.86 E-value=1.2e-21 Score=196.02 Aligned_cols=190 Identities=19% Similarity=0.130 Sum_probs=132.9
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|++|.||+|+.+.+|+.||||.....-..... ....+.+|+..
T Consensus 7 ~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~-------------------------------~~~~~~~e~~~ 55 (267)
T cd08229 7 EKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAK-------------------------------ARADCIKEIDL 55 (267)
T ss_pred hhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHH-------------------------------HHHHHHHHHHH
Confidence 46899999999999999889999999976431100000 00011122211
Q ss_pred H--HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHh-c--CCCCHH--HHHHHHHHHHHHHH
Q 008643 187 T--LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIK-G--AGIDVG--GFLTVGVSAALRQL 259 (558)
Q Consensus 187 ~--~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~-~--~~~~~~--~~~~~~v~~~L~~L 259 (558)
. ..|+|+.++...+... ...+++|||++|++|.+..... . ...+.. ..+..+++.++.+|
T Consensus 56 l~~~~h~~i~~~~~~~~~~-------------~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~L 122 (267)
T cd08229 56 LKQLNHPNVIKYYASFIED-------------NELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHM 122 (267)
T ss_pred HHHccCCchhhhhheeEeC-------------CeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHH
Confidence 1 1245555555444332 3448999999999998754321 1 123333 34567899999999
Q ss_pred HHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHH
Q 008643 260 LEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPAL 339 (558)
Q Consensus 260 h~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l 339 (558)
|+.|++|+|+||.||+++.+|.++++|||++..+...... .+...++..+++|+.......+..+|+|++|..+
T Consensus 123 H~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il 196 (267)
T cd08229 123 HSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLL 196 (267)
T ss_pred HHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCcc------cccccCCcCccCHHHhcCCCccchhhHHHHHHHH
Confidence 9999999999999999999999999999998766543211 1223467778899998877788889999999999
Q ss_pred HHHHHhh
Q 008643 340 EAIWQNS 346 (558)
Q Consensus 340 ~~l~~~~ 346 (558)
++++.+.
T Consensus 197 ~~l~~g~ 203 (267)
T cd08229 197 YEMAALQ 203 (267)
T ss_pred HHHHhCC
Confidence 9999753
No 158
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.86 E-value=2.5e-22 Score=212.23 Aligned_cols=200 Identities=23% Similarity=0.268 Sum_probs=144.9
Q ss_pred hhhcccCcceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHh
Q 008643 100 AVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEK 179 (558)
Q Consensus 100 ~~f~~~~~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~ 179 (558)
..|-.+ ++||-|.||.|..++...|...+|+|.+|.. |+-.-..++ .
T Consensus 629 SmFvki--k~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKa-------DVl~rnQva------------------------H 675 (1034)
T KOG0608|consen 629 SMFVKI--KTIGVGAFGEVCLVRKVDTRALYAMKTLRKA-------DVLMRNQVA------------------------H 675 (1034)
T ss_pred cceEEE--eeecccccceeEEEeecchhhHHHHhhhHHH-------HHHhhhhhh------------------------h
Confidence 445455 7999999999999998778788999976532 221111111 2
Q ss_pred hHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeec--CCCceEEEEeeeCCCCCCCHH-HHhcCCCCHHHHHHHHHHHHH
Q 008643 180 LLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKR--LSGSRVLVMEWIDGIRCTDPQ-AIKGAGIDVGGFLTVGVSAAL 256 (558)
Q Consensus 180 l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~vLvmE~i~G~~L~d~~-~~~~~~~~~~~~~~~~v~~~L 256 (558)
+..|-|...||.| ++| .+.|.. .....|+||+||+||++-.+. ...-..++.+++|...+.|++
T Consensus 676 VKAERDILAEADn-----------~WV--VrLyySFQDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAi 742 (1034)
T KOG0608|consen 676 VKAERDILAEADN-----------EWV--VRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAI 742 (1034)
T ss_pred hhhhhhhHhhcCC-----------cce--EEEEEEeccCCceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 3445555555543 333 233332 245569999999999987652 222223566788999999999
Q ss_pred HHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccC------------------------------------hhhHHH
Q 008643 257 RQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELS------------------------------------QQNKQI 300 (558)
Q Consensus 257 ~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~------------------------------------~~~~~~ 300 (558)
++.|..||+||||||.||||+.||+|||.|||+|.-+. .+.+..
T Consensus 743 esVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~ 822 (1034)
T KOG0608|consen 743 ESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQ 822 (1034)
T ss_pred HHHHhccceecccCccceEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhh
Confidence 99999999999999999999999999999999986431 001122
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHh
Q 008643 301 LIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 301 l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~ 345 (558)
...++.|.+-|+..|+||+++..--++.-.|.|+.|++|++|+-+
T Consensus 823 h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g 867 (1034)
T KOG0608|consen 823 HQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVG 867 (1034)
T ss_pred hhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhC
Confidence 234566778899999999998876677889999999999999864
No 159
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.85 E-value=3.2e-21 Score=197.40 Aligned_cols=191 Identities=18% Similarity=0.235 Sum_probs=138.7
Q ss_pred HhhhcccCcceeeeeeccEEEEEEEcCCCcEEEEEEecCCChh---hHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHH
Q 008643 99 EAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEP---IIYRDLFLFRTLASFLNGISIQKLGCNAELIVDE 175 (558)
Q Consensus 99 ~~~f~~~~~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~---~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e 175 (558)
...|+.+ ..||.|+||.||+|+...+|+.||||+.+..... .+.+++.++
T Consensus 20 ~~~~~~~--~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l------------------------- 72 (297)
T cd06659 20 RSLLENY--IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIM------------------------- 72 (297)
T ss_pred hhhHHhh--hhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHH-------------------------
Confidence 3444433 4799999999999999889999999987543211 111111111
Q ss_pred HHHhhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHH
Q 008643 176 FGEKLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAA 255 (558)
Q Consensus 176 ~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~ 255 (558)
..+ .|+|+.++.+.+.... ..+++|||++|++|.+..............+..+++.+
T Consensus 73 ------~~l----~hp~i~~~~~~~~~~~-------------~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~ 129 (297)
T cd06659 73 ------RDY----QHQNVVEMYKSYLVGE-------------ELWVLMEFLQGGALTDIVSQTRLNEEQIATVCESVLQA 129 (297)
T ss_pred ------HhC----CCCchhhhhhheeeCC-------------eEEEEEecCCCCCHHHHHhhcCCCHHHHHHHHHHHHHH
Confidence 111 2677777777654433 34899999999988765432222233334577899999
Q ss_pred HHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccH
Q 008643 256 LRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPI 335 (558)
Q Consensus 256 L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l 335 (558)
+.+||+.|++|+|+||+||+++.+|.++|+|||++..+....... ....++..|++|+....+..+...|+|++
T Consensus 130 L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~sl 203 (297)
T cd06659 130 LCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR------KSLVGTPYWMAPEVISRTPYGTEVDIWSL 203 (297)
T ss_pred HHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccc------cceecCccccCHHHHccCCCCchhhHHHH
Confidence 999999999999999999999999999999999987655432211 12246778999999887778889999999
Q ss_pred HHHHHHHHHh
Q 008643 336 IPALEAIWQN 345 (558)
Q Consensus 336 ~~~l~~l~~~ 345 (558)
|..+++++.+
T Consensus 204 G~il~el~~g 213 (297)
T cd06659 204 GIMVIEMVDG 213 (297)
T ss_pred HHHHHHHHhC
Confidence 9999999974
No 160
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.85 E-value=3.4e-22 Score=227.70 Aligned_cols=198 Identities=17% Similarity=0.161 Sum_probs=135.5
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|++|.||+|+.+.+|+.||||+.+......- ...+.+
T Consensus 7 i~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e-------------------------------~~~~rf------ 49 (932)
T PRK13184 7 IRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENP-------------------------------LLKKRF------ 49 (932)
T ss_pred EEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCH-------------------------------HHHHHH------
Confidence 4689999999999999988999999999875432110 001111
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHh--c--------CCCCHH--HHHHHHHHH
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIK--G--------AGIDVG--GFLTVGVSA 254 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~--~--------~~~~~~--~~~~~~v~~ 254 (558)
.+|.. ....+.+.+.+.+..++. .....+++|||++|++|.++.... . .+.+.. ..+..+++.
T Consensus 50 lrEi~----ILs~L~HPNIVkl~~v~~-d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~ 124 (932)
T PRK13184 50 LREAK----IAADLIHPGIVPVYSICS-DGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICA 124 (932)
T ss_pred HHHHH----HHHhCCCcCcCeEEEEEe-eCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHH
Confidence 12222 222233333333333332 245679999999999997754321 0 011112 235678999
Q ss_pred HHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHH----------HH--HHHHHHhcCHHHHHHHHHH
Q 008643 255 ALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQIL----------ID--AVVHAVNEDYAEMANDFTR 322 (558)
Q Consensus 255 ~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l----------~~--~~~~~~~~d~~~~a~~~~~ 322 (558)
+|.|||+.|++|||+||+||+++.+|.++++|||++........... .. .......|++.|+||+...
T Consensus 125 AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~ 204 (932)
T PRK13184 125 TIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLL 204 (932)
T ss_pred HHHHHHHCCccccCCchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhc
Confidence 99999999999999999999999999999999999987632110000 00 0001134788999999998
Q ss_pred cCCCCCCCCcccHHHHHHHHHHhh
Q 008643 323 LGFLAKGTDVSPIIPALEAIWQNS 346 (558)
Q Consensus 323 ~g~~~~~~Di~~l~~~l~~l~~~~ 346 (558)
.+..+..+|+|++|+.+++++++.
T Consensus 205 g~~~S~kSDIWSLGVILyELLTG~ 228 (932)
T PRK13184 205 GVPASESTDIYALGVILYQMLTLS 228 (932)
T ss_pred CCCCCcHhHHHHHHHHHHHHHHCC
Confidence 888888999999999999999853
No 161
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.85 E-value=7.3e-21 Score=191.64 Aligned_cols=192 Identities=18% Similarity=0.159 Sum_probs=133.3
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||.|++|+||+|+...+|+.||||+.+......... . +.
T Consensus 7 ~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~---------------------------------~------~~ 47 (277)
T cd06917 7 ELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVS---------------------------------D------IQ 47 (277)
T ss_pred hheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHH---------------------------------H------HH
Confidence 67999999999999998899999999876543211000 0 11
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHCCceec
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGLFHG 267 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi~H~ 267 (558)
.|...+.++.. ..+.+.+.+... ....+..+++|||++|++|.++........+....+..+++.++.+||+.|++|+
T Consensus 48 ~e~~~l~~l~~-~~~~~vi~~~~~-~~~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~ 125 (277)
T cd06917 48 REVALLSQLRQ-SQPPNITKYYGS-YLKGPRLWIIMEYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVGVIHR 125 (277)
T ss_pred HHHHHHHHhcc-CCCCCeeeEeee-eeeCCEEEEEEecCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 22222222211 112222323222 2335567899999999999876433221222334567789999999999999999
Q ss_pred CCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCC-CCCCCCcccHHHHHHHHHHhh
Q 008643 268 DPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGF-LAKGTDVSPIIPALEAIWQNS 346 (558)
Q Consensus 268 DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~-~~~~~Di~~l~~~l~~l~~~~ 346 (558)
|++|.||+++.+|.++++|||.+..+....... ....++..|++|+....|. .+..+|+|++|..+++++.+.
T Consensus 126 dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~ 199 (277)
T cd06917 126 DIKAANILVTNTGNVKLCDFGVAALLNQNSSKR------STFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGN 199 (277)
T ss_pred CcCHHHEEEcCCCCEEEccCCceeecCCCcccc------ccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCC
Confidence 999999999999999999999998776543211 1123667788999876554 477899999999999999753
No 162
>PTZ00284 protein kinase; Provisional
Probab=99.85 E-value=2.5e-21 Score=211.05 Aligned_cols=191 Identities=18% Similarity=0.159 Sum_probs=127.9
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||.|+||.||+|+++.+|+.||||+.+.... ... ....|+.+
T Consensus 134 ~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~--~~~---------------------------------~~~~e~~~ 178 (467)
T PTZ00284 134 LSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK--YTR---------------------------------DAKIEIQF 178 (467)
T ss_pred EEEEEeccCEEEEEEEEcCCCeEEEEEEEecchh--hHH---------------------------------HHHHHHHH
Confidence 3689999999999999988999999999863210 000 01112211
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHh-cCCCCHHHHHHHHHHHHHHHHHH-CCc
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIK-GAGIDVGGFLTVGVSAALRQLLE-FGL 264 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~-~~~~~~~~~~~~~v~~~L~~Lh~-~Gi 264 (558)
..+.... ......+.+.+...+.......+++||++ |+.+.+..... .........+..|++.||.|||. .||
T Consensus 179 l~~l~~~----~~~~~~~i~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gI 253 (467)
T PTZ00284 179 MEKVRQA----DPADRFPLMKIQRYFQNETGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHL 253 (467)
T ss_pred HHHHhhc----CcccCcceeeeEEEEEcCCceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCe
Confidence 1111110 00111122333333433345678999988 55555433211 12233345577899999999997 599
Q ss_pred eecCCCCCCEEEecCC----------------CeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCC
Q 008643 265 FHGDPHPGNIFAMRDG----------------RIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAK 328 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg----------------~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~ 328 (558)
+||||||+|||++.+| ++||+|||.+....... ....++..|+|||++..+.++.
T Consensus 254 iHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~~---------~~~~gt~~Y~APE~~~~~~~~~ 324 (467)
T PTZ00284 254 MHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERHSR---------TAIVSTRHYRSPEVVLGLGWMY 324 (467)
T ss_pred ecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCcccc---------ccccCCccccCcHHhhcCCCCc
Confidence 9999999999998765 49999999876433221 1235788999999998888888
Q ss_pred CCCcccHHHHHHHHHHhh
Q 008643 329 GTDVSPIIPALEAIWQNS 346 (558)
Q Consensus 329 ~~Di~~l~~~l~~l~~~~ 346 (558)
.+|+|++|+.+++++.+.
T Consensus 325 ~~DiwSlGvil~elltG~ 342 (467)
T PTZ00284 325 STDMWSMGCIIYELYTGK 342 (467)
T ss_pred HHHHHHHHHHHHHHHhCC
Confidence 999999999999999853
No 163
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.85 E-value=4.3e-21 Score=194.54 Aligned_cols=237 Identities=16% Similarity=0.186 Sum_probs=149.6
Q ss_pred eeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHHH
Q 008643 109 TIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYTL 188 (558)
Q Consensus 109 pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~~ 188 (558)
.||+|+||.||+|+...+|+.||||+.++.....-..+. .+..
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~-------------------------------------~~~~ 43 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGET-------------------------------------LALN 43 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHH-------------------------------------HHHH
Confidence 379999999999999888999999988754221100000 0000
Q ss_pred HHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHCCceec
Q 008643 189 EARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLEFGLFHG 267 (558)
Q Consensus 189 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~~Gi~H~ 267 (558)
| ..+.++.... +++.+.....+.......+++|||++|++|.+...... ........+..|++.++.|||..|++|+
T Consensus 44 ~-~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~ 121 (279)
T cd05633 44 E-RIMLSLVSTG-DCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYR 121 (279)
T ss_pred H-HHHHHHHhhC-CCCcEeEEEEEEecCCeEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCC
Confidence 1 1111222211 23333222222223456789999999999976543221 1223334577899999999999999999
Q ss_pred CCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcccHHHHHHHHHHhh
Q 008643 268 DPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLG-FLAKGTDVSPIIPALEAIWQNS 346 (558)
Q Consensus 268 DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g-~~~~~~Di~~l~~~l~~l~~~~ 346 (558)
|+||+||+++.++.++++|||++........ ....++..|++|+....+ ..+..+|+|++|+.+++++.+.
T Consensus 122 dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~ 193 (279)
T cd05633 122 DLKPANILLDEHGHVRISDLGLACDFSKKKP--------HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGH 193 (279)
T ss_pred CCCHHHEEECCCCCEEEccCCcceeccccCc--------cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCC
Confidence 9999999999999999999999876643221 112467889999987643 4677899999999999999753
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCC
Q 008643 347 SGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPD 398 (558)
Q Consensus 347 ~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~ 398 (558)
.. +...... ....+.+.....+..+|+.+..-++.++.. ++..||+
T Consensus 194 ~p--f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~---~l~~~p~ 239 (279)
T cd05633 194 SP--FRQHKTK-DKHEIDRMTLTVNVELPDSFSPELKSLLEG---LLQRDVS 239 (279)
T ss_pred CC--cCCCCCc-CHHHHHHHhhcCCcCCccccCHHHHHHHHH---HhcCCHH
Confidence 32 2111111 112233334445556666655555555543 4555553
No 164
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.85 E-value=6.6e-22 Score=202.22 Aligned_cols=188 Identities=20% Similarity=0.177 Sum_probs=133.5
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||.|++|.||+|+.+.+|+.||+|.......... .. +.
T Consensus 26 ~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~----------------------------------~~------~~ 65 (296)
T cd06654 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK----------------------------------EL------II 65 (296)
T ss_pred EEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchH----------------------------------HH------HH
Confidence 679999999999999988999999998754321110 00 11
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHCCceec
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGLFHG 267 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi~H~ 267 (558)
+|.. ....+.+.+.+.+...+ ......++||||++|++|.++.............+..+++.++.+||..|++|+
T Consensus 66 ~e~~----~l~~~~h~~v~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~ 140 (296)
T cd06654 66 NEIL----VMRENKNPNIVNYLDSY-LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHR 140 (296)
T ss_pred HHHH----HHHhCCCCCEeeEEEEE-EeCCEEEEeecccCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccC
Confidence 1111 11122233323222222 224567999999999999876432222222334567789999999999999999
Q ss_pred CCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHhh
Q 008643 268 DPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNS 346 (558)
Q Consensus 268 DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~~ 346 (558)
|+||.||+++.++.++++|||++.......... ....+++.|++|+....+..++.+|+|++|+.+++++.+.
T Consensus 141 dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~ 213 (296)
T cd06654 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR------STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213 (296)
T ss_pred CCCHHHEEEcCCCCEEECccccchhcccccccc------CcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCC
Confidence 999999999999999999999988665432211 1124677899999998888889999999999999999754
No 165
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.85 E-value=1.3e-21 Score=200.19 Aligned_cols=187 Identities=19% Similarity=0.196 Sum_probs=131.7
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||.|++|.||+|+...+|+.|+||........... .+.+|+
T Consensus 25 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~----------------------------------~~~~e~--- 67 (296)
T cd06655 25 EKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKE----------------------------------LIINEI--- 67 (296)
T ss_pred EEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHH----------------------------------HHHHHH---
Confidence 6899999999999999889999999976432111000 011111
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHCCceec
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGLFHG 267 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi~H~ 267 (558)
. ....+.+.+.+.+...+ ......+++|||++|++|.+.........+....+..+++.++.+||+.|++|+
T Consensus 68 ---~----~l~~l~h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~ 139 (296)
T cd06655 68 ---L----VMKELKNPNIVNFLDSF-LVGDELFVVMEYLAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQVIHR 139 (296)
T ss_pred ---H----HHHhcCCCceeeeeeeE-ecCceEEEEEEecCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccC
Confidence 1 11112222222222222 223456999999999999775433222333344567789999999999999999
Q ss_pred CCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHh
Q 008643 268 DPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 268 DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~ 345 (558)
|+||.||+++.+|.++++|||++..+....... ....++..|++|+....+..+..+|+|++|+.+++++.+
T Consensus 140 dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg 211 (296)
T cd06655 140 DIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKR------STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEG 211 (296)
T ss_pred CCCHHHEEECCCCCEEEccCccchhcccccccC------CCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhC
Confidence 999999999999999999999988765433211 122467789999998877788899999999999999974
No 166
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.85 E-value=1.7e-21 Score=199.86 Aligned_cols=187 Identities=17% Similarity=0.112 Sum_probs=124.5
Q ss_pred cceeeeeeccEEEEEEEcCCCcEE--EEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhh
Q 008643 107 SQTIAAASLGQVYRATLRETGEDV--AIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEEL 184 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~V--AVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~El 184 (558)
.+.||.|+||+||+|+++.+|..+ ++|..+....... ...+.+|+
T Consensus 12 ~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~---------------------------------~~~~~~Ei 58 (303)
T cd05088 12 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDD---------------------------------HRDFAGEL 58 (303)
T ss_pred eeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHH---------------------------------HHHHHHHH
Confidence 478999999999999997788755 5665443221100 01111222
Q ss_pred cHHHHHHHHHHHHHhcCCCCCe-eeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC---------------CCCH--HH
Q 008643 185 DYTLEARNMEDFLENFKDDPTV-KIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA---------------GIDV--GG 246 (558)
Q Consensus 185 d~~~Ea~n~~~~~~~~~~~~~v-~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~---------------~~~~--~~ 246 (558)
..+ ..+.+++.+ .+... ....+..+++|||++|++|.+....... .++. ..
T Consensus 59 ------~~l----~~l~~h~~iv~~~~~-~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 127 (303)
T cd05088 59 ------EVL----CKLGHHPNIINLLGA-CEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 127 (303)
T ss_pred ------HHH----HHhcCCCCcceEEEE-ECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHH
Confidence 111 112122222 22222 2334567999999999998775432211 1222 23
Q ss_pred HHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCC
Q 008643 247 FLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFL 326 (558)
Q Consensus 247 ~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~ 326 (558)
.+..|++.++.+||+.|++|+|+||+||+++.++.++++|||++......... ........|++|+....+..
T Consensus 128 ~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~ 200 (303)
T cd05088 128 HFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKK-------TMGRLPVRWMAIESLNYSVY 200 (303)
T ss_pred HHHHHHHHHHHHHHhCCccccccchheEEecCCCcEEeCccccCcccchhhhc-------ccCCCcccccCHHHHhccCC
Confidence 46788999999999999999999999999999999999999998643221110 00112456889998888888
Q ss_pred CCCCCcccHHHHHHHHHH
Q 008643 327 AKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 327 ~~~~Di~~l~~~l~~l~~ 344 (558)
++.+|+|++|..++++++
T Consensus 201 ~~~~Di~slG~il~ellt 218 (303)
T cd05088 201 TTNSDVWSYGVLLWEIVS 218 (303)
T ss_pred cccccchhhhhHHHHHHh
Confidence 889999999999999986
No 167
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.85 E-value=9.9e-22 Score=198.09 Aligned_cols=190 Identities=15% Similarity=0.131 Sum_probs=127.8
Q ss_pred cceeeeeeccEEEEEEEcC-----CCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhH
Q 008643 107 SQTIAAASLGQVYRATLRE-----TGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLL 181 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~-----~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~ 181 (558)
.+.||.|++|.||+|+... +++.||||+.+........ ..
T Consensus 10 ~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~---------------------------------~~-- 54 (280)
T cd05049 10 KRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDAR---------------------------------KD-- 54 (280)
T ss_pred HhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHH---------------------------------HH--
Confidence 3679999999999998742 3578999987644221110 01
Q ss_pred hhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC-------------CCC--HHH
Q 008643 182 EELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA-------------GID--VGG 246 (558)
Q Consensus 182 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~-------------~~~--~~~ 246 (558)
+.+|...+.+ +.+.+.+.+...+ ......+++|||++|++|.++...... ..+ ...
T Consensus 55 ----~~~e~~~l~~----l~~~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~ 125 (280)
T cd05049 55 ----FEREAELLTN----FQHENIVKFYGVC-TEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLL 125 (280)
T ss_pred ----HHHHHHHHHh----cCCCCchheeeEE-ecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHH
Confidence 1122222111 2222222222222 223566999999999999876432211 112 223
Q ss_pred HHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCC
Q 008643 247 FLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFL 326 (558)
Q Consensus 247 ~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~ 326 (558)
.+..+++.++.++|..|++|+|+||+||+++.++.++++|||++..+......... .....++.|+||+.+..+..
T Consensus 126 ~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~ 201 (280)
T cd05049 126 QIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVG----GHTMLPIRWMPPESIMYRKF 201 (280)
T ss_pred HHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEEECCcccceecccCcceecC----CCCcccceecChhhhccCCc
Confidence 46788999999999999999999999999999999999999998765332110000 01123567899999998999
Q ss_pred CCCCCcccHHHHHHHHHH
Q 008643 327 AKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 327 ~~~~Di~~l~~~l~~l~~ 344 (558)
++.+|+|++|..++++++
T Consensus 202 ~~~~Di~slG~il~e~~~ 219 (280)
T cd05049 202 TTESDVWSFGVVLWEIFT 219 (280)
T ss_pred chhhhHHHHHHHHHHHHh
Confidence 999999999999999986
No 168
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.85 E-value=1.2e-21 Score=199.19 Aligned_cols=208 Identities=16% Similarity=0.176 Sum_probs=137.4
Q ss_pred cceeeeeeccEEEEEEEcCCC----------------cEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChH
Q 008643 107 SQTIAAASLGQVYRATLRETG----------------EDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAE 170 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G----------------~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~ 170 (558)
.+.||+|+||.||+|+...++ ..||+|+.+.+.......
T Consensus 10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~------------------------- 64 (296)
T cd05051 10 VEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNARE------------------------- 64 (296)
T ss_pred cccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHH-------------------------
Confidence 468999999999999875433 468999887653221000
Q ss_pred HHHHHHHHhhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC----------
Q 008643 171 LIVDEFGEKLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA---------- 240 (558)
Q Consensus 171 ~iv~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~---------- 240 (558)
. +..|.. ....+.+.+.+.+...+ ......+++|||++|++|.+.......
T Consensus 65 --------~------~~~e~~----~l~~l~~~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 125 (296)
T cd05051 65 --------D------FLKEVK----ILSRLSDPNIARLLGVC-TVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSK 125 (296)
T ss_pred --------H------HHHHHH----HHHhcCCCCEeEEEEEE-ecCCCcEEEEecCCCCCHHHHHHhcccccccccccCC
Confidence 1 111122 22222333333333222 223567999999999998775432220
Q ss_pred CCCHH--HHHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHH
Q 008643 241 GIDVG--GFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMAN 318 (558)
Q Consensus 241 ~~~~~--~~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~ 318 (558)
..+.. ..+..+++.++.+||+.|++|+|+||+||+++.++.++++|||++..+........ .....++..|++|
T Consensus 126 ~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aP 201 (296)
T cd05051 126 SLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRV----QGRAPLPIRWMAW 201 (296)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeecCCCceEEccccceeecccCcceee----cCcCCCCceecCH
Confidence 12333 34668899999999999999999999999999999999999999876543221100 0112345678999
Q ss_pred HHHHcCCCCCCCCcccHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 008643 319 DFTRLGFLAKGTDVSPIIPALEAIWQNSSGKGLADFNFRSVTGQ 362 (558)
Q Consensus 319 ~~~~~g~~~~~~Di~~l~~~l~~l~~~~~~~~~~~~~~~~l~~~ 362 (558)
+....+..++.+|+|++|..++++++.....++...+...+...
T Consensus 202 E~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~ 245 (296)
T cd05051 202 ESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIEN 245 (296)
T ss_pred HHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHH
Confidence 99888888999999999999999987433344444444444333
No 169
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.85 E-value=1.1e-20 Score=187.93 Aligned_cols=191 Identities=18% Similarity=0.137 Sum_probs=133.0
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|++|.||+|+.+.+|+.||||......... .. .+.+
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~--~~------------------------------~~~~------ 46 (257)
T cd08223 5 VRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASR--RE------------------------------RKAA------ 46 (257)
T ss_pred EEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCH--HH------------------------------HHHH------
Confidence 368999999999999998889999999864321100 00 0001
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC-CCCHH--HHHHHHHHHHHHHHHHCC
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA-GIDVG--GFLTVGVSAALRQLLEFG 263 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~-~~~~~--~~~~~~v~~~L~~Lh~~G 263 (558)
.+|. .....+.+.+.+.+...+.......+++|||++|+++.+....... ..+.. ..+..+++.++.++|+.|
T Consensus 47 ~~e~----~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ 122 (257)
T cd08223 47 EQEA----QLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH 122 (257)
T ss_pred HHHH----HHHHhCCCCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 1111 2222333333333333222233456899999999998765433222 23333 346678999999999999
Q ss_pred ceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 008643 264 LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 264 i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~ 343 (558)
++|+|+||.||+++.++.++++|||++..+...... .....+++.|++|+....+..+..+|+|++|..+++++
T Consensus 123 i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~ 196 (257)
T cd08223 123 ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDM------ASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMA 196 (257)
T ss_pred eeccCCCchhEEEecCCcEEEecccceEEecccCCc------cccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHH
Confidence 999999999999999999999999998766432211 11224577889999998888888999999999999998
Q ss_pred Hh
Q 008643 344 QN 345 (558)
Q Consensus 344 ~~ 345 (558)
+.
T Consensus 197 ~g 198 (257)
T cd08223 197 TL 198 (257)
T ss_pred cC
Confidence 74
No 170
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.85 E-value=1.2e-21 Score=197.11 Aligned_cols=188 Identities=21% Similarity=0.226 Sum_probs=134.1
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||.|++|.||+|+...+|+.||+|+........ +. ..+.+|+
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~---~~------------------------------~~~~~e~--- 50 (274)
T cd06609 7 ECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAED---EI------------------------------EDIQQEI--- 50 (274)
T ss_pred hhhcCCCCeEEEEEEECCCCeEEEEEEeeccccch---HH------------------------------HHHHHHH---
Confidence 67999999999999998899999999875331100 00 0011111
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHCCceec
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGLFHG 267 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi~H~ 267 (558)
+....+.+.+.+.+... .......++++||++|++|.+.......+......+..|++.++.++|..|++|+
T Consensus 51 -------~~l~~l~h~~i~~~~~~-~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~ 122 (274)
T cd06609 51 -------QFLSQCRSPYITKYYGS-FLKGSKLWIIMEYCGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEEGKIHR 122 (274)
T ss_pred -------HHHHHcCCCCeeeeeEE-EEECCeEEEEEEeeCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 12222333332322222 2234667999999999999776443322333445577899999999999999999
Q ss_pred CCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHh
Q 008643 268 DPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 268 DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~ 345 (558)
|++|.||+++.+|.++++|||++..+....... ....++..|++|+....+..++.+|+|++|..+++++++
T Consensus 123 dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~------~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg 194 (274)
T cd06609 123 DIKAANILLSEEGDVKLADFGVSGQLTSTMSKR------NTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKG 194 (274)
T ss_pred CCCHHHEEECCCCCEEEcccccceeeccccccc------ccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhC
Confidence 999999999999999999999998876542110 112356678999999888888999999999999999974
No 171
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.85 E-value=2.5e-21 Score=193.40 Aligned_cols=192 Identities=17% Similarity=0.109 Sum_probs=131.0
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||.|++|.||+|..+.+|+.||+|..++...... +....+.+|+.
T Consensus 7 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-------------------------------~~~~~~~~ei~- 54 (267)
T cd08224 7 EKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDA-------------------------------KARQDCLKEID- 54 (267)
T ss_pred eeeeccCCceEEEEEEEcCCCCEEEEEEeecccccch-------------------------------hhHHHHHHHHH-
Confidence 4689999999999999988999999998764211000 00011112221
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHh-c--CCCCHH--HHHHHHHHHHHHHHHH
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIK-G--AGIDVG--GFLTVGVSAALRQLLE 261 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~-~--~~~~~~--~~~~~~v~~~L~~Lh~ 261 (558)
....+.+...+.+...+ ......+++|||++|++|.+..... . ...+.. ..+..+++.++.+||+
T Consensus 55 ---------~l~~~~~~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~ 124 (267)
T cd08224 55 ---------LLKQLDHPNVIKYLASF-IENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHS 124 (267)
T ss_pred ---------HHHhCCCCCeeeeeeee-ecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHh
Confidence 12222222222222222 2234568999999999997654321 1 112322 3467789999999999
Q ss_pred CCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHH
Q 008643 262 FGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEA 341 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~ 341 (558)
.|++|+|+||.||+++.+|.++++|||++..+....... ....++..|++|+.......+..+|+|++|..+++
T Consensus 125 ~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~------~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~ 198 (267)
T cd08224 125 KRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA------HSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYE 198 (267)
T ss_pred CCEecCCcChhhEEECCCCcEEEeccceeeeccCCCccc------ceecCCccccCHHHhccCCCCchhcHHHHHHHHHH
Confidence 999999999999999999999999999987665432211 11235667889998877777888999999999999
Q ss_pred HHHhh
Q 008643 342 IWQNS 346 (558)
Q Consensus 342 l~~~~ 346 (558)
++++.
T Consensus 199 l~~g~ 203 (267)
T cd08224 199 MAALQ 203 (267)
T ss_pred HHHCC
Confidence 99854
No 172
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.85 E-value=2e-21 Score=194.48 Aligned_cols=192 Identities=17% Similarity=0.098 Sum_probs=133.4
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||.|++|.||+|+.+.+|+.||||..++....... . +.++
T Consensus 7 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~-------------------------------~------~~~~ 49 (267)
T cd08228 7 EKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAK-------------------------------A------RQDC 49 (267)
T ss_pred eeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHH-------------------------------H------HHHH
Confidence 46899999999999999889999999976542110000 0 0011
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHh---cCCCCHH--HHHHHHHHHHHHHHHH
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIK---GAGIDVG--GFLTVGVSAALRQLLE 261 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~---~~~~~~~--~~~~~~v~~~L~~Lh~ 261 (558)
.+|. ++...+.+...+.+...+. .....+++|||++|++|.+..... ....+.. ..+..+++.++.|||+
T Consensus 50 ~~e~----~~l~~l~h~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~ 124 (267)
T cd08228 50 VKEI----DLLKQLNHPNVIKYLDSFI-EDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHS 124 (267)
T ss_pred HHHH----HHHHhCCCcceeeeeeeEE-ECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 1111 1222223332222222222 235568999999999987654321 1123332 3467789999999999
Q ss_pred CCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHH
Q 008643 262 FGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEA 341 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~ 341 (558)
.|++|+|+||+||+++.+|.++++|||++..+...... .....++..+++|+.......+..+|+|++|..+++
T Consensus 125 ~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~~------~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~e 198 (267)
T cd08228 125 RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYE 198 (267)
T ss_pred CCeeCCCCCHHHEEEcCCCCEEECccccceeccchhHH------HhcCCCCccccChhhhccCCCCchhhHHHHHHHHHH
Confidence 99999999999999999999999999998877653321 123356778899998877777888999999999999
Q ss_pred HHHhh
Q 008643 342 IWQNS 346 (558)
Q Consensus 342 l~~~~ 346 (558)
++++.
T Consensus 199 l~~g~ 203 (267)
T cd08228 199 MAALQ 203 (267)
T ss_pred HhcCC
Confidence 99743
No 173
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.85 E-value=2.5e-21 Score=203.66 Aligned_cols=179 Identities=13% Similarity=0.137 Sum_probs=131.3
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|++|+||+|+.+.+++.||+|+...+.. ..+..+++. +
T Consensus 71 ~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~~---~~E~~~l~~-------------------------------l-- 114 (357)
T PHA03209 71 IKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGTT---LIEAMLLQN-------------------------------V-- 114 (357)
T ss_pred EEEecCCCCeEEEEEEECCCCceEEEEeCCcccc---HHHHHHHHh-------------------------------C--
Confidence 4789999999999999988899999998654321 122222221 1
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCH--HHHHHHHHHHHHHHHHHCCc
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDV--GGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~--~~~~~~~v~~~L~~Lh~~Gi 264 (558)
.|+|+.++++.+... ...+++||++.| .+.+.........+. ...+..|++.||.|||++|+
T Consensus 115 --~h~~iv~~~~~~~~~-------------~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i 178 (357)
T PHA03209 115 --NHPSVIRMKDTLVSG-------------AITCMVLPHYSS-DLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRI 178 (357)
T ss_pred --CCCCCcChhheEEeC-------------CeeEEEEEccCC-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 156666666555443 334899999975 454433222223333 34577899999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
+|||+||+||+++.++.++|+|||++......... ....++..|++|+.+..+.++..+|+|++|+.+++++.
T Consensus 179 vHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~ 251 (357)
T PHA03209 179 IHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAF-------LGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLA 251 (357)
T ss_pred ecCCCCHHHEEECCCCCEEEecCccccccccCccc-------ccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHH
Confidence 99999999999999999999999998743322111 12347888999999988888899999999999999986
No 174
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.85 E-value=1.2e-21 Score=195.71 Aligned_cols=234 Identities=15% Similarity=0.165 Sum_probs=147.0
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||.|++|.||+|.. .+++.||||..+++-... . ++
T Consensus 11 ~~~lg~g~~~~v~~~~~-~~~~~v~iK~~~~~~~~~--~---------------------------------------~~ 48 (261)
T cd05068 11 LRKLGAGQFGEVWEGLW-NNTTPVAVKTLKPGTMDP--K---------------------------------------DF 48 (261)
T ss_pred EEEecccCCccEEEEEe-cCCeEEEEEeeCCCcccH--H---------------------------------------HH
Confidence 37899999999999998 577899999887642110 0 01
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCH--HHHHHHHHHHHHHHHHHCC
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDV--GGFLTVGVSAALRQLLEFG 263 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~--~~~~~~~v~~~L~~Lh~~G 263 (558)
..|...+.+ +.+.+.+.+.. +.......+++|||++|++|.+...... ...+. ...+..+++.++.+||+.|
T Consensus 49 ~~e~~~l~~----l~h~~i~~~~~-~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 123 (261)
T cd05068 49 LAEAQIMKK----LRHPKLIQLYA-VCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN 123 (261)
T ss_pred HHHHHHHHH----CCCCCccceeE-EEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 112221111 22222222222 2223455699999999999987643322 12333 3346678999999999999
Q ss_pred ceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 008643 264 LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 264 i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~ 343 (558)
++|+|+||+||+++.+|.++++|||++..+......... .......|++|+....+..+..+|+|++|..+++++
T Consensus 124 i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~ 198 (261)
T cd05068 124 YIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEARE-----GAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIV 198 (261)
T ss_pred eeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccC-----CCcCceeccCccccccCCCCchhhHHHHHHHHHHHH
Confidence 999999999999999999999999999877632211000 001134688999888778888999999999999998
Q ss_pred H-hhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 344 Q-NSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 344 ~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
+ +. .++...+...+... +...++...|.....-++.++.. |...||+-+
T Consensus 199 t~g~--~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~---~l~~~P~~R 248 (261)
T cd05068 199 TYGR--MPYPGMTNAEVLQQ---VDQGYRMPCPPGCPKELYDIMLD---CWKEDPDDR 248 (261)
T ss_pred hcCC--CCCCCCCHHHHHHH---HHcCCCCCCCCcCCHHHHHHHHH---HhhcCcccC
Confidence 7 32 12333333333222 22233333344333344444433 555666544
No 175
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.85 E-value=1.1e-20 Score=194.78 Aligned_cols=189 Identities=17% Similarity=0.159 Sum_probs=129.6
Q ss_pred cceeeeeeccEEEEEEEcCCCcE----EEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHh
Q 008643 107 SQTIAAASLGQVYRATLRETGED----VAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLE 182 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~----VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~ 182 (558)
.+.||+|+||+||+|++..+|+. ||||+.+......... .+.
T Consensus 12 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~---------------------------------~~~- 57 (316)
T cd05108 12 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK---------------------------------EIL- 57 (316)
T ss_pred eeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHH---------------------------------HHH-
Confidence 47899999999999998666664 8999876532211110 111
Q ss_pred hhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHHHHHHHHHHH
Q 008643 183 ELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVGVSAALRQLL 260 (558)
Q Consensus 183 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~v~~~L~~Lh 260 (558)
.|. .....+.+.+.+.+...+. ....++++||++++++.+.........+.. ..+..+++.||.|||
T Consensus 58 -----~e~----~~l~~l~h~niv~~~g~~~--~~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH 126 (316)
T cd05108 58 -----DEA----YVMASVDNPHVCRLLGICL--TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 126 (316)
T ss_pred -----HHH----HHHHhCCCCCCCeEEEEEc--CCCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH
Confidence 111 1222233333332222221 345689999999999987644333233333 345679999999999
Q ss_pred HCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHH
Q 008643 261 EFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALE 340 (558)
Q Consensus 261 ~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~ 340 (558)
+.|++|+|+||+||+++.++.++|+|||++..+......... .....+..|++|+....+..+..+|+|++|..++
T Consensus 127 ~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~----~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~ 202 (316)
T cd05108 127 ERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHA----EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 202 (316)
T ss_pred hcCeeccccchhheEecCCCcEEEccccccccccCCCcceec----cCCccceeecChHHhccCCCCchhhhHHHHHHHH
Confidence 999999999999999999999999999999877543321100 0011245688999988888889999999999999
Q ss_pred HHHH
Q 008643 341 AIWQ 344 (558)
Q Consensus 341 ~l~~ 344 (558)
++++
T Consensus 203 el~t 206 (316)
T cd05108 203 ELMT 206 (316)
T ss_pred HHHc
Confidence 9885
No 176
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.85 E-value=2.7e-21 Score=193.18 Aligned_cols=188 Identities=18% Similarity=0.164 Sum_probs=131.2
Q ss_pred eeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHHHH
Q 008643 110 IAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYTLE 189 (558)
Q Consensus 110 Ig~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~~E 189 (558)
||.|++|.||+|+...+|+.||+|+.++.....- +..+.+.+|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~-------------------------------~~~~~~~~e------ 43 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVET-------------------------------GQQEHIFSE------ 43 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhh-------------------------------hHHHHHHHH------
Confidence 6899999999999988899999999864321100 000111111
Q ss_pred HHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC-CCCHHHHHHHHHHHHHHHHHHCCceecC
Q 008643 190 ARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA-GIDVGGFLTVGVSAALRQLLEFGLFHGD 268 (558)
Q Consensus 190 a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~-~~~~~~~~~~~v~~~L~~Lh~~Gi~H~D 268 (558)
. ++...+.+.+.+.+...+ ......+++|||++|++|.+....... .......+..+++.++.++|+.|++|+|
T Consensus 44 ~----~~l~~l~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~d 118 (262)
T cd05572 44 K----EILEECNHPFIVKLYRTF-KDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRD 118 (262)
T ss_pred H----HHHHhCCCCCEeeeeeeE-EcCCccEEEEecCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCC
Confidence 1 122223232222222222 224456899999999999775432211 2223345667899999999999999999
Q ss_pred CCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHhh
Q 008643 269 PHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNS 346 (558)
Q Consensus 269 lhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~~ 346 (558)
+||.||+++.+|.++++|||.+..+...... ....++..+++|+.......+..+|+|++|..+++++.+.
T Consensus 119 l~~~nilv~~~~~~~l~df~~~~~~~~~~~~-------~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~ 189 (262)
T cd05572 119 LKPENLLLDSNGYVKLVDFGFAKKLKSGQKT-------WTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGR 189 (262)
T ss_pred CCHHHEEEcCCCCEEEeeCCcccccCccccc-------ccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCC
Confidence 9999999999999999999999887654311 1124567789999887777788899999999999999753
No 177
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.85 E-value=2e-21 Score=193.58 Aligned_cols=186 Identities=15% Similarity=0.116 Sum_probs=127.6
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|+||.||+|++ .++..||+|..+.+... +-+|
T Consensus 9 ~~~lg~G~~~~vy~~~~-~~~~~~a~K~~~~~~~~-----------------------------------------~~~~ 46 (256)
T cd05114 9 MKELGSGQFGVVHLGKW-RAQIKVAIKAINEGAMS-----------------------------------------EEDF 46 (256)
T ss_pred eeEecCCcCceEEEEEe-ccCceEEEEecccCCcc-----------------------------------------HHHH
Confidence 36799999999999998 57789999986643110 0011
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCH--HHHHHHHHHHHHHHHHHCCc
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDV--GGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~--~~~~~~~v~~~L~~Lh~~Gi 264 (558)
.+|..-+.+ +.+.+.+.+...+ ......+++|||++|++|.+.........+. ...+..+++.++.+||..|+
T Consensus 47 ~~e~~~l~~----l~h~~i~~~~~~~-~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 121 (256)
T cd05114 47 IEEAKVMMK----LSHPKLVQLYGVC-TQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSF 121 (256)
T ss_pred HHHHHHHHH----CCCCCceeEEEEE-ccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 112221111 1222222222222 2345569999999999997754322222333 34466789999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
+|+|+||+||+++.++.++++|||.+..+....... .....+...|++|+.......+..+|+|++|..+++++.
T Consensus 122 ~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~ 196 (256)
T cd05114 122 IHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTS-----SSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFT 196 (256)
T ss_pred cccccCcceEEEcCCCeEEECCCCCccccCCCceec-----cCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHc
Confidence 999999999999999999999999988664321110 001123457889999887777889999999999999987
No 178
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.85 E-value=2.2e-21 Score=196.72 Aligned_cols=185 Identities=21% Similarity=0.251 Sum_probs=131.0
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||+|++|+||+|....+|+.||+|+.......... +.+..|+...
T Consensus 11 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~---------------------------------~~~~~E~~~l 57 (284)
T cd06620 11 SDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVR---------------------------------KQILRELQIM 57 (284)
T ss_pred HHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHH---------------------------------HHHHHHHHHH
Confidence 6899999999999999888999999987654221111 1111222111
Q ss_pred H--HHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHH-CC
Q 008643 188 L--EARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLE-FG 263 (558)
Q Consensus 188 ~--Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~-~G 263 (558)
. +|+|+.++.+.+ ......++||||++|++|.+...... ...+....+..+++.++.|||+ +|
T Consensus 58 ~~l~h~~i~~~~~~~-------------~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~ 124 (284)
T cd06620 58 HECRSPYIVSFYGAF-------------LNENNICMCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHR 124 (284)
T ss_pred HHcCCCCcceEeeeE-------------ecCCEEEEEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 0 133333333222 22356699999999999976543211 1223334567789999999996 79
Q ss_pred ceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 008643 264 LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 264 i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~ 343 (558)
++|+|++|.||+++.+++++++|||++........ ....++..+++|+....+..+..+|+|++|+.+++++
T Consensus 125 i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~--------~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~ 196 (284)
T cd06620 125 IMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIA--------DTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELA 196 (284)
T ss_pred eeccCCCHHHEEECCCCcEEEccCCcccchhhhcc--------CccccCcccCCHHHHccCCCCccchHHHHHHHHHHHH
Confidence 99999999999999999999999999876533211 1224677889999988788888999999999999998
Q ss_pred Hhh
Q 008643 344 QNS 346 (558)
Q Consensus 344 ~~~ 346 (558)
.+.
T Consensus 197 tg~ 199 (284)
T cd06620 197 LGK 199 (284)
T ss_pred hCC
Confidence 743
No 179
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.85 E-value=2e-21 Score=207.05 Aligned_cols=184 Identities=16% Similarity=0.176 Sum_probs=130.0
Q ss_pred cceeeeeeccEEEEEEEc--CCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhh
Q 008643 107 SQTIAAASLGQVYRATLR--ETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEEL 184 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~--~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~El 184 (558)
.+.||.|++|.||+|..+ .++..||||+...+. ...+++.+++.+.
T Consensus 97 ~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~--~~~~E~~il~~l~------------------------------ 144 (392)
T PHA03207 97 LSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK--TPGREIDILKTIS------------------------------ 144 (392)
T ss_pred EEeecCCCCeEEEEEEEcCCccceeEEEEeccccc--cHHHHHHHHHhcC------------------------------
Confidence 478999999999999863 356789999876431 2223333332221
Q ss_pred cHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCC--CHHHHHHHHHHHHHHHHHHC
Q 008643 185 DYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGI--DVGGFLTVGVSAALRQLLEF 262 (558)
Q Consensus 185 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~--~~~~~~~~~v~~~L~~Lh~~ 262 (558)
|+|+.++...+.. ....+++||++.| .+.+... ....+ .....+..|++.||.|||+.
T Consensus 145 -----h~~iv~~~~~~~~-------------~~~~~lv~e~~~~-~l~~~l~-~~~~l~~~~~~~i~~ql~~aL~~LH~~ 204 (392)
T PHA03207 145 -----HRAIINLIHAYRW-------------KSTVCMVMPKYKC-DLFTYVD-RSGPLPLEQAITIQRRLLEALAYLHGR 204 (392)
T ss_pred -----CCCccceeeeEee-------------CCEEEEEehhcCC-CHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 4444444333322 3445899999975 4443321 12223 33445778999999999999
Q ss_pred CceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHH
Q 008643 263 GLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAI 342 (558)
Q Consensus 263 Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l 342 (558)
|++|+|+||.||+++.+|.++|+|||++..+........ .....++..|++|+++..+.++..+|+|++|+.++++
T Consensus 205 givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el 280 (392)
T PHA03207 205 GIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQ----CYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEM 280 (392)
T ss_pred CccccCCCHHHEEEcCCCCEEEccCccccccCccccccc----ccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHH
Confidence 999999999999999999999999999977654321100 0123478899999999888888899999999999999
Q ss_pred HHhh
Q 008643 343 WQNS 346 (558)
Q Consensus 343 ~~~~ 346 (558)
+.+.
T Consensus 281 ~~g~ 284 (392)
T PHA03207 281 SVKN 284 (392)
T ss_pred HHCC
Confidence 9753
No 180
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.85 E-value=1.3e-21 Score=199.65 Aligned_cols=208 Identities=14% Similarity=0.176 Sum_probs=137.1
Q ss_pred cceeeeeeccEEEEEEEcCC------------C--cEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHH
Q 008643 107 SQTIAAASLGQVYRATLRET------------G--EDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELI 172 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~------------G--~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~i 172 (558)
.+.||+|+||.||+|+...+ + ..||||+.+++.......
T Consensus 10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~--------------------------- 62 (295)
T cd05097 10 KEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARN--------------------------- 62 (295)
T ss_pred hhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHH---------------------------
Confidence 36799999999999987432 2 258999988764321111
Q ss_pred HHHHHHhhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC-----------C
Q 008643 173 VDEFGEKLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA-----------G 241 (558)
Q Consensus 173 v~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~-----------~ 241 (558)
. |.+|...+. .+.+...+.+...+ ......+++|||++|++|.+....... .
T Consensus 63 ------~------~~~ei~~l~----~l~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 125 (295)
T cd05097 63 ------D------FLKEIKIMS----RLKNPNIIRLLGVC-VSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPS 125 (295)
T ss_pred ------H------HHHHHHHHH----hCCCCCcCeEEEEE-cCCCccEEEEecCCCCcHHHHHHhccccccccccccCCc
Confidence 1 112222222 22333333332222 234567999999999999876432210 1
Q ss_pred CCHH--HHHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHH
Q 008643 242 IDVG--GFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMAND 319 (558)
Q Consensus 242 ~~~~--~~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~ 319 (558)
.+.. ..+..+++.++.|||+.|++|+|+||+||+++.++.++++|||++..+....... ..+...+...|++|+
T Consensus 126 ~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE 201 (295)
T cd05097 126 VSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYR----IQGRAVLPIRWMAWE 201 (295)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcCCCcEEecccccccccccCccee----ccCcCcCceeecChh
Confidence 1222 3366789999999999999999999999999999999999999987654322110 011122356789999
Q ss_pred HHHcCCCCCCCCcccHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 008643 320 FTRLGFLAKGTDVSPIIPALEAIWQNSSGKGLADFNFRSVTGQ 362 (558)
Q Consensus 320 ~~~~g~~~~~~Di~~l~~~l~~l~~~~~~~~~~~~~~~~l~~~ 362 (558)
....+.++..+|+|++|..++++++.....++...+...+...
T Consensus 202 ~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~ 244 (295)
T cd05097 202 SILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIEN 244 (295)
T ss_pred hhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHH
Confidence 9888888999999999999999997544444444444444333
No 181
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.85 E-value=2.3e-21 Score=198.12 Aligned_cols=234 Identities=18% Similarity=0.156 Sum_probs=143.6
Q ss_pred cceeeeeeccEEEEEEEcCCCc--EEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhh
Q 008643 107 SQTIAAASLGQVYRATLRETGE--DVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEEL 184 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~--~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~El 184 (558)
.+.||+|+||+||+|+++.+|. .+++|..+........ +.+.+|+
T Consensus 7 ~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~---------------------------------~~~~~E~ 53 (297)
T cd05089 7 EDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDH---------------------------------RDFAGEL 53 (297)
T ss_pred eeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHH---------------------------------HHHHHHH
Confidence 5689999999999999977765 4688876532211100 0111111
Q ss_pred cHHH---HHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc---------------CCCC--H
Q 008643 185 DYTL---EARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG---------------AGID--V 244 (558)
Q Consensus 185 d~~~---Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~---------------~~~~--~ 244 (558)
.... .|+|+.++...+. ..+..+++|||+++++|.+...... ...+ .
T Consensus 54 ~~l~~l~~hp~iv~~~~~~~-------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~ 120 (297)
T cd05089 54 EVLCKLGHHPNIINLLGACE-------------NRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQ 120 (297)
T ss_pred HHHHhhcCCCchhheEEEEc-------------cCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHH
Confidence 1100 1333333333222 2344589999999999877643211 0122 2
Q ss_pred HHHHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC
Q 008643 245 GGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLG 324 (558)
Q Consensus 245 ~~~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g 324 (558)
...+..|++.++.+||+.|++|+|+||+||+++.++.++++|||++.......... .......|++|+....+
T Consensus 121 ~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~-------~~~~~~~y~aPE~~~~~ 193 (297)
T cd05089 121 LLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVYVKKT-------MGRLPVRWMAIESLNYS 193 (297)
T ss_pred HHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEECCcCCCccccceeccC-------CCCcCccccCchhhccC
Confidence 23467899999999999999999999999999999999999999986433211110 01123468899988877
Q ss_pred CCCCCCCcccHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 325 FLAKGTDVSPIIPALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 325 ~~~~~~Di~~l~~~l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
..+..+|+|++|+.++++++. ...++...+...+... +........|..+...++.++.. |+..+|+.+
T Consensus 194 ~~~~~~DvwSlG~il~el~t~-g~~pf~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~---~l~~~p~~R 262 (297)
T cd05089 194 VYTTKSDVWSFGVLLWEIVSL-GGTPYCGMTCAELYEK---LPQGYRMEKPRNCDDEVYELMRQ---CWRDRPYER 262 (297)
T ss_pred CCCchhhHHHHHHHHHHHHcC-CCCCCCCCCHHHHHHH---HhcCCCCCCCCCCCHHHHHHHHH---HcCCChhhC
Confidence 888899999999999999851 1223333333333332 22233333444444444444443 555555443
No 182
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.85 E-value=2.8e-21 Score=197.17 Aligned_cols=140 Identities=15% Similarity=0.131 Sum_probs=101.8
Q ss_pred CCceEEEEeeeCCCCCCCHHHHhcCC----------CC--HHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeE
Q 008643 216 SGSRVLVMEWIDGIRCTDPQAIKGAG----------ID--VGGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIA 283 (558)
Q Consensus 216 ~~~~vLvmE~i~G~~L~d~~~~~~~~----------~~--~~~~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~ 283 (558)
....+++|||++|++|.++....... .+ ....+..+++.++.+||+.|++|+|+||.||+++.++.++
T Consensus 91 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~~~~~~ 170 (296)
T cd05095 91 SDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNYTIK 170 (296)
T ss_pred CCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcCCCCEE
Confidence 45569999999999997764332111 11 2345678899999999999999999999999999999999
Q ss_pred EeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHhhcCCCCCCCCHHHH
Q 008643 284 YVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNSSGKGLADFNFRSV 359 (558)
Q Consensus 284 liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~~~~~~~~~~~~~~l 359 (558)
++|||++..+........ .+.......+++|+....+.++..+|+|++|+.++++++.....++...+...+
T Consensus 171 l~dfg~~~~~~~~~~~~~----~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~ 242 (296)
T cd05095 171 IADFGMSRNLYSGDYYRI----QGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQV 242 (296)
T ss_pred eccCcccccccCCcceec----cCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHH
Confidence 999999887643321100 011122456788888888888999999999999999997544444444444443
No 183
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.85 E-value=7.1e-21 Score=182.75 Aligned_cols=166 Identities=25% Similarity=0.306 Sum_probs=109.9
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
..||+|++|+||+|.+. +|+.||||+++++.......| ..+....++- ......++..++.++ ..
T Consensus 3 ~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~---------~~ 67 (190)
T cd05147 3 GCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRD-RYVSGEFRFR----HGYCKSNPRKMVRTW---------AE 67 (190)
T ss_pred CccccccceEEEEEECC-CCCEEEEEEEEecccccccHH-HhhcCCchhh----ccccCCCHHHHHHHH---------HH
Confidence 57999999999999995 999999999998743221111 1100000000 000112333333322 24
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHHHHHHHHHH-HHCCc
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVGVSAALRQL-LEFGL 264 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~v~~~L~~L-h~~Gi 264 (558)
.|++++.++.. +.+..|.++. ....+|||||++|+.+.... ....+.+.. ..+..+++.++.++ |..|+
T Consensus 68 ~E~~~l~~l~~-----~~v~~p~~~~--~~~~~iVmE~i~g~~l~~~~-~~~~~~~~~~~~~i~~qi~~~L~~l~H~~gi 139 (190)
T cd05147 68 KEMRNLKRLVT-----AGIPCPEPIL--LKSHVLVMEFIGDDGWAAPR-LKDAPLSESKARELYLQVIQIMRILYQDCRL 139 (190)
T ss_pred HHHHHHHHHHH-----CCCCCCcEEE--ecCCEEEEEEeCCCCCcchh-hhcCCCCHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 67888888864 2344565553 34459999999997665432 223344443 34677899999999 69999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhh
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQN 297 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~ 297 (558)
+||||||+||+++ +|+++|+|||++.......
T Consensus 140 iHrDlkP~NIli~-~~~v~LiDFG~a~~~~~~~ 171 (190)
T cd05147 140 VHADLSEYNLLYH-DGKLYIIDVSQSVEHDHPH 171 (190)
T ss_pred ccCCCCHHHEEEE-CCcEEEEEccccccCCCcC
Confidence 9999999999998 5899999999998665443
No 184
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.85 E-value=1.1e-21 Score=198.54 Aligned_cols=238 Identities=16% Similarity=0.210 Sum_probs=148.3
Q ss_pred cceeeeeeccEEEEEEEc----CCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHh
Q 008643 107 SQTIAAASLGQVYRATLR----ETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLE 182 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~----~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~ 182 (558)
.+.||+|+||+||+|+.. .++..|++|..+......-..
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~------------------------------------- 52 (283)
T cd05090 10 MEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWG------------------------------------- 52 (283)
T ss_pred eeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHH-------------------------------------
Confidence 368999999999999863 356789999876432110000
Q ss_pred hhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC----------------CCCHH-
Q 008643 183 ELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA----------------GIDVG- 245 (558)
Q Consensus 183 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~----------------~~~~~- 245 (558)
++.+|.. ....+.+.+.+.+...+ ......+++|||++|++|.++...... .++..
T Consensus 53 --~~~~E~~----~l~~l~h~niv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (283)
T cd05090 53 --EFQQEAS----LMAELHHPNIVCLLGVV-TQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGD 125 (283)
T ss_pred --HHHHHHH----HHhhCCCCCeeeEEEEE-ecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHH
Confidence 0112222 22223333333333322 224566999999999998776432211 12222
Q ss_pred -HHHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC
Q 008643 246 -GFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLG 324 (558)
Q Consensus 246 -~~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g 324 (558)
..+..+++.++.|||+.|++|+|+||.||+++.++.++++|||++..+........ .....++..|++|+....+
T Consensus 126 ~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~ 201 (283)
T cd05090 126 FLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRV----QPKSLLPIRWMPPEAIMYG 201 (283)
T ss_pred HHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcEEeccccccccccCCcceec----ccCCCccceecChHHhccC
Confidence 23667899999999999999999999999999999999999999987643321110 0112235668999998878
Q ss_pred CCCCCCCcccHHHHHHHHHH-hhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 325 FLAKGTDVSPIIPALEAIWQ-NSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 325 ~~~~~~Di~~l~~~l~~l~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
..++.+|+|++|..++++++ +.. ++...+...+...+. .......|..+...++.++.. |+..||+-+
T Consensus 202 ~~~~~~Dv~slG~il~el~~~g~~--p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~li~~---cl~~~p~~R 270 (283)
T cd05090 202 KFSSDSDIWSFGVVLWEIFSFGLQ--PYYGFSNQEVIEMVR---KRQLLPCSEDCPPRMYSLMTE---CWQEGPSRR 270 (283)
T ss_pred CCCchhhhHHHHHHHHHHHcCCCC--CCCCCCHHHHHHHHH---cCCcCCCCCCCCHHHHHHHHH---HcccCcccC
Confidence 88899999999999999996 221 222233333322221 122233444444445555544 666666544
No 185
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.85 E-value=1.6e-21 Score=215.00 Aligned_cols=241 Identities=15% Similarity=0.151 Sum_probs=159.3
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCC---hhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhh
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGI---EPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEE 183 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~---~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~E 183 (558)
++.|++|+|++||.|.+...|.+||+|.+.-.- ...+.+|+.+|+.+.
T Consensus 42 ~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~----------------------------- 92 (738)
T KOG1989|consen 42 EKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLS----------------------------- 92 (738)
T ss_pred EEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhc-----------------------------
Confidence 468999999999999997666999999765331 233445555555443
Q ss_pred hcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHh-cCC--CCHHHHHHHHHHHHHHHHH
Q 008643 184 LDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIK-GAG--IDVGGFLTVGVSAALRQLL 260 (558)
Q Consensus 184 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~-~~~--~~~~~~~~~~v~~~L~~Lh 260 (558)
-|+|++.|.+.......- .. -.-+..|.||||.|+.|-|....+ ..+ ++....|+.+++.|+.+||
T Consensus 93 -----gh~nIV~yidss~~~~~~---~~---~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH 161 (738)
T KOG1989|consen 93 -----GHKNIVSYIDSSAINRSS---NN---GVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMH 161 (738)
T ss_pred -----CCCceeeEeccccccccC---CC---ceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHh
Confidence 167777776632111100 00 001237999999998887764422 223 4444568889999999999
Q ss_pred HCC--ceecCCCCCCEEEecCCCeEEeecCcccccCh-----hhHHHHHHHHHHHHhcCHHHHHHHHHHc---CCCCCCC
Q 008643 261 EFG--LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQ-----QNKQILIDAVVHAVNEDYAEMANDFTRL---GFLAKGT 330 (558)
Q Consensus 261 ~~G--i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~-----~~~~~l~~~~~~~~~~d~~~~a~~~~~~---g~~~~~~ 330 (558)
... ++|||||-+|||+..+|+.||||||.+..... ..+..+-+-+. -+.++.|=+||++++ -.++.++
T Consensus 162 ~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~--k~TTp~YRsPEMIDlysg~pI~eKs 239 (738)
T KOG1989|consen 162 YLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIE--KYTTPQYRSPEMIDLYSGLPIGEKS 239 (738)
T ss_pred cCCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHH--hhCCccccChHHHhhhcCCCCcchh
Confidence 998 99999999999999999999999999875432 12222222111 245778888888775 3477899
Q ss_pred CcccHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 331 DVSPIIPALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 331 Di~~l~~~l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
|||++|+.||.++- +..++..-.--.|+. -+|.|...+.++--++.|+.. |+.-||+-+
T Consensus 240 DIWALGclLYkLCy--~t~PFe~sg~laIln------g~Y~~P~~p~ys~~l~~LI~~---mL~~nP~~R 298 (738)
T KOG1989|consen 240 DIWALGCLLYKLCY--FTTPFEESGKLAILN------GNYSFPPFPNYSDRLKDLIRT---MLQPNPDER 298 (738)
T ss_pred HHHHHHHHHHHHHH--hCCCcCcCcceeEEe------ccccCCCCccHHHHHHHHHHH---HhccCcccC
Confidence 99999999999984 333433221111111 134444435677777777765 778888765
No 186
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.85 E-value=7.7e-21 Score=187.96 Aligned_cols=235 Identities=20% Similarity=0.240 Sum_probs=154.5
Q ss_pred eeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHHHH
Q 008643 110 IAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYTLE 189 (558)
Q Consensus 110 Ig~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~~E 189 (558)
||.|++|.||+|....+|+.||+|+.+........ .. ..+..|. .+.+.+ .
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~-~~----------------------~~~~~e~--~~l~~l----~ 51 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRK-EV----------------------EHTLTER--NILSRI----N 51 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchH-HH----------------------HHHHHHH--HHHHHc----C
Confidence 68999999999999878999999998754321100 00 0000011 011111 1
Q ss_pred HHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHCCceecC
Q 008643 190 ARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLEFGLFHGD 268 (558)
Q Consensus 190 a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~~Gi~H~D 268 (558)
|+|+..+...+.+...+ +++|||++|++|.+...... ........+..+++.++.++|..|++|+|
T Consensus 52 h~~i~~~~~~~~~~~~~-------------~~v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~ 118 (250)
T cd05123 52 HPFIVKLHYAFQTEEKL-------------YLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRD 118 (250)
T ss_pred CCcHHHHHHHeecCCee-------------EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecC
Confidence 67777777766555444 99999999998876543321 12233345678899999999999999999
Q ss_pred CCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHhhcC
Q 008643 269 PHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNSSG 348 (558)
Q Consensus 269 lhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~~~~ 348 (558)
+||.||+++.++.++++|||++......... .....++..+++|+.......++..|+|++|..+++++.+..
T Consensus 119 l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~------~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~- 191 (250)
T cd05123 119 LKPENILLDADGHIKLTDFGLAKELSSEGSR------TNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKP- 191 (250)
T ss_pred CCcceEEEcCCCcEEEeecCcceecccCCCc------ccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCC-
Confidence 9999999999999999999999876543211 112346777889999887777888999999999999998532
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCCh
Q 008643 349 KGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKF 401 (558)
Q Consensus 349 ~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~~ 401 (558)
++...+...+ .+.+....+.+|..+..-++.++.. |+..||+-++
T Consensus 192 -p~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~i~~---~l~~~p~~R~ 236 (250)
T cd05123 192 -PFYAEDRKEI----YEKILKDPLRFPEFLSPEARDLISG---LLQKDPTKRL 236 (250)
T ss_pred -CCCCCCHHHH----HHHHhcCCCCCCCCCCHHHHHHHHH---HhcCCHhhCC
Confidence 2222222222 2223334455555443334444433 4556665553
No 187
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.85 E-value=5.1e-21 Score=191.47 Aligned_cols=196 Identities=19% Similarity=0.172 Sum_probs=133.7
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|++|+||+|..+.+|+.||+|+.+........ +. +....+..|+..
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~-~~---------------------------~~~~~~~~e~~~ 56 (268)
T cd06630 5 GQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSE-QE---------------------------EVVEALRKEIRL 56 (268)
T ss_pred cceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchh-HH---------------------------HHHHHHHHHHHH
Confidence 46799999999999999899999999998653211100 00 000111122211
Q ss_pred HH--HHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCC--HHHHHHHHHHHHHHHHHHC
Q 008643 187 TL--EARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGID--VGGFLTVGVSAALRQLLEF 262 (558)
Q Consensus 187 ~~--Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~--~~~~~~~~v~~~L~~Lh~~ 262 (558)
.. .|+|+.++.+.+.+. ...+++|||++|++|.+..... ...+ ....+..|++.|+.+||+.
T Consensus 57 l~~l~h~~iv~~~~~~~~~-------------~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~al~~LH~~ 122 (268)
T cd06630 57 MARLNHPHIIRMLGATCED-------------SHFNLFVEWMAGGSVSHLLSKY-GAFKEAVIINYTEQLLRGLSYLHEN 122 (268)
T ss_pred HHHcCCCceehhhceeccC-------------CeEEEEEeccCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 10 145555555444433 3448999999999998764322 2233 3344678999999999999
Q ss_pred CceecCCCCCCEEEecCC-CeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHH
Q 008643 263 GLFHGDPHPGNIFAMRDG-RIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEA 341 (558)
Q Consensus 263 Gi~H~DlhPgNIlv~~dg-~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~ 341 (558)
|++|+|++|+||+++.+| .++++|||++..+....... ........++..+++|+.......+..+|+|++|..+++
T Consensus 123 ~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~ 200 (268)
T cd06630 123 QIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGA--GEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIE 200 (268)
T ss_pred CeecCCCCHHHEEEcCCCCEEEEcccccccccccccccC--CccccccccccceeCHhHhccCCCCcccchHHHHHHHHH
Confidence 999999999999998776 59999999988775431110 000011235678899999877777888999999999999
Q ss_pred HHHhh
Q 008643 342 IWQNS 346 (558)
Q Consensus 342 l~~~~ 346 (558)
++.+.
T Consensus 201 l~~g~ 205 (268)
T cd06630 201 MATAK 205 (268)
T ss_pred HHhCC
Confidence 99753
No 188
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.85 E-value=2.8e-21 Score=198.00 Aligned_cols=188 Identities=14% Similarity=0.135 Sum_probs=128.0
Q ss_pred cceeeeeeccEEEEEEEc-------CCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHh
Q 008643 107 SQTIAAASLGQVYRATLR-------ETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEK 179 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~-------~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~ 179 (558)
.++||+|+||.||+|+.. .++..||+|+.+......-. ..
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~---------------------------------~~ 66 (304)
T cd05101 20 GKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDL---------------------------------SD 66 (304)
T ss_pred cceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHH---------------------------------HH
Confidence 479999999999999752 23558999988654221100 01
Q ss_pred hHhhhcHHH---HHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC---------------C
Q 008643 180 LLEELDYTL---EARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA---------------G 241 (558)
Q Consensus 180 l~~Eld~~~---Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~---------------~ 241 (558)
+.+|+.... .|+|+.++...+.+ ....+++|||+++++|.++...... .
T Consensus 67 ~~~E~~~l~~l~~h~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~ 133 (304)
T cd05101 67 LVSEMEMMKMIGKHKNIINLLGACTQ-------------DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQ 133 (304)
T ss_pred HHHHHHHHHhhccCCCchheeEEEec-------------CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCccc
Confidence 112221110 13444443333322 3445899999999998776543211 1
Q ss_pred CCH--HHHHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHH
Q 008643 242 IDV--GGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMAND 319 (558)
Q Consensus 242 ~~~--~~~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~ 319 (558)
.+. ...+..|++.++.|||++|++|+|+||.||+++.+|.++++|||.+..+........ .....+.+.|++|+
T Consensus 134 ~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~----~~~~~~~~~y~aPE 209 (304)
T cd05101 134 MTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKK----TTNGRLPVKWMAPE 209 (304)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCCCcEEECCCccceeccccccccc----ccCCCCCceeeCch
Confidence 111 234567999999999999999999999999999999999999999987754322110 01112346789999
Q ss_pred HHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 320 FTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 320 ~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
....+.++..+|+|++|..+++++.
T Consensus 210 ~~~~~~~~~~~Di~slG~~l~el~~ 234 (304)
T cd05101 210 ALFDRVYTHQSDVWSFGVLMWEIFT 234 (304)
T ss_pred hhccCCCCchhhHHHHHHHHHHHHc
Confidence 8887778888999999999999986
No 189
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.85 E-value=1.4e-21 Score=195.96 Aligned_cols=191 Identities=17% Similarity=0.217 Sum_probs=131.6
Q ss_pred cceeeeeeccEEEEEEEcCCCc---EEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhh
Q 008643 107 SQTIAAASLGQVYRATLRETGE---DVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEE 183 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~---~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~E 183 (558)
.+.||+|++|+||+|+++.+|. .||||..+++.......+
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~------------------------------------- 52 (268)
T cd05063 10 QKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQD------------------------------------- 52 (268)
T ss_pred eeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHH-------------------------------------
Confidence 4789999999999999976665 799998876532211100
Q ss_pred hcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCH--HHHHHHHHHHHHHHHHH
Q 008643 184 LDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDV--GGFLTVGVSAALRQLLE 261 (558)
Q Consensus 184 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~--~~~~~~~v~~~L~~Lh~ 261 (558)
+.+|. +....+.+.+.+.+...+. .....+++|||++|++|.+.........+. ...+..+++.++.++|+
T Consensus 53 --~~~e~----~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~ 125 (268)
T cd05063 53 --FLSEA----SIMGQFSHHNIIRLEGVVT-KFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSD 125 (268)
T ss_pred --HHHHH----HHHhcCCCCCeeEEEEEEc-cCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 11122 1222233333333333332 234568999999999997764332222233 34467889999999999
Q ss_pred CCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHH
Q 008643 262 FGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEA 341 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~ 341 (558)
.|++|+|+||.||+++.++.++++|||++..+.......... ......+.|++|+.+..+..+..+|+|++|..+++
T Consensus 126 ~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~---~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~e 202 (268)
T cd05063 126 MNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTT---SGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWE 202 (268)
T ss_pred CCeeccccchhhEEEcCCCcEEECCCccceecccccccceec---cCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHH
Confidence 999999999999999999999999999988765432221110 01112346889999888888889999999999999
Q ss_pred HHH
Q 008643 342 IWQ 344 (558)
Q Consensus 342 l~~ 344 (558)
++.
T Consensus 203 ll~ 205 (268)
T cd05063 203 VMS 205 (268)
T ss_pred HHh
Confidence 875
No 190
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.85 E-value=2.6e-21 Score=192.97 Aligned_cols=232 Identities=15% Similarity=0.170 Sum_probs=149.7
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCCh---hhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhh
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIE---PIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEE 183 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~---~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~E 183 (558)
.+.||.|++|.||+|+.+ +++.|++|+.+.... ..+..++.++ ..
T Consensus 11 ~~~ig~g~~~~vy~~~~~-~~~~~~~k~~~~~~~~~~~~~~~e~~~l-------------------------------~~ 58 (261)
T cd05148 11 ERKLGSGYFGEVWEGLWK-NRVRVAIKILKSDDLLKQQDFQKEVQAL-------------------------------KR 58 (261)
T ss_pred hhhhccCCCccEEEeEec-CCCcEEEEeccccchhhHHHHHHHHHHH-------------------------------hc
Confidence 367999999999999995 599999999765422 1111111111 11
Q ss_pred hcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCH--HHHHHHHHHHHHHHHH
Q 008643 184 LDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDV--GGFLTVGVSAALRQLL 260 (558)
Q Consensus 184 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~--~~~~~~~v~~~L~~Lh 260 (558)
++ |+|+.++...+.+ ....+++|||++|++|.+...... ...+. ...+..+++.++.+||
T Consensus 59 l~----~~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH 121 (261)
T cd05148 59 LR----HKHLISLFAVCSV-------------GEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLE 121 (261)
T ss_pred CC----CcchhheeeeEec-------------CCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 11 4555554443333 234589999999999987643221 12233 3446678999999999
Q ss_pred HCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHH
Q 008643 261 EFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALE 340 (558)
Q Consensus 261 ~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~ 340 (558)
+.|++|+|++|.||+++.++.++++|||.+..+...... .+...+.+.+++|+....+..+..+|+|++|..++
T Consensus 122 ~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~------~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~ 195 (261)
T cd05148 122 EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYL------SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLY 195 (261)
T ss_pred HCCeeccccCcceEEEcCCceEEEccccchhhcCCcccc------ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHH
Confidence 999999999999999999999999999999876543211 01122355688999988888888999999999999
Q ss_pred HHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 341 AIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 341 ~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
++++. ...++...+....... +...+....|.....-++.++.. |+..||+-+
T Consensus 196 ~l~~~-g~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~---~l~~~p~~R 248 (261)
T cd05148 196 EMFTY-GQVPYPGMNNHEVYDQ---ITAGYRMPCPAKCPQEIYKIMLE---CWAAEPEDR 248 (261)
T ss_pred HHHcC-CCCCCCcCCHHHHHHH---HHhCCcCCCCCCCCHHHHHHHHH---HcCCCchhC
Confidence 99862 1112223333333332 22233333343333334444433 666677544
No 191
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.85 E-value=1.3e-20 Score=188.30 Aligned_cols=234 Identities=18% Similarity=0.233 Sum_probs=155.0
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||.|++|+||+|.. .++..||+|..+++.... . ++.
T Consensus 12 ~~ig~g~~~~v~~~~~-~~~~~~~~k~~~~~~~~~-----------------------------------~------~~~ 49 (260)
T cd05070 12 KKLGNGQFGEVWMGTW-NGNTKVAVKTLKPGTMSP-----------------------------------E------SFL 49 (260)
T ss_pred heeccccCceEEEEEe-cCCceeEEEEecCCCCCH-----------------------------------H------HHH
Confidence 6799999999999998 578889999987642210 0 011
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCH--HHHHHHHHHHHHHHHHHCCc
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDV--GGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~--~~~~~~~v~~~L~~Lh~~Gi 264 (558)
+|.. +...+.+...+.+...+. ....+++|||++|++|.+...... ...+. ...+..+++.++.|||+.|+
T Consensus 50 ~E~~----~l~~l~~~~i~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i 123 (260)
T cd05070 50 EEAQ----IMKKLRHDKLVQLYAVVS--EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNY 123 (260)
T ss_pred HHHH----HHHhcCCCceEEEEeEEC--CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 2221 223334444444443332 455799999999999877643221 12332 34567889999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
+|+|+||+||+++.++.++++|||.+..+........ ....+...|++|+....+..+..+|+|++|..++++++
T Consensus 124 ~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~ 198 (260)
T cd05070 124 IHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTAR-----QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVT 198 (260)
T ss_pred ccCCCccceEEEeCCceEEeCCceeeeeccCcccccc-----cCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHh
Confidence 9999999999999999999999999987654321100 01123456899999888888889999999999999997
Q ss_pred hhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCCh
Q 008643 345 NSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKF 401 (558)
Q Consensus 345 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~~ 401 (558)
. ...++...+..+.... +....+...|......+++++.. |+..||+-+.
T Consensus 199 ~-g~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~---~l~~~p~~Rp 248 (260)
T cd05070 199 K-GRVPYPGMNNREVLEQ---VERGYRMPCPQDCPISLHELMLQ---CWKKDPEERP 248 (260)
T ss_pred c-CCCCCCCCCHHHHHHH---HHcCCCCCCCCcCCHHHHHHHHH---HcccCcccCc
Confidence 2 1123333333333333 22334445555555556666654 6666776654
No 192
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.85 E-value=2.7e-21 Score=192.54 Aligned_cols=189 Identities=17% Similarity=0.187 Sum_probs=135.7
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||.|++|.||+|+.+.+|+.|+||+.+......... . +
T Consensus 6 ~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~---------------------------------~------~ 46 (264)
T cd06623 6 VKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRK---------------------------------Q------L 46 (264)
T ss_pred eeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHH---------------------------------H------H
Confidence 378999999999999998889999999887653210000 0 1
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCH--HHHHHHHHHHHHHHHHH-CC
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDV--GGFLTVGVSAALRQLLE-FG 263 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~--~~~~~~~v~~~L~~Lh~-~G 263 (558)
..|...+.+ +.+...+.+...+ ......+++|||++|++|.+..... ...+. ...+..+++.++.++|+ .|
T Consensus 47 ~~e~~~l~~----l~~~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~~ 120 (264)
T cd06623 47 LRELKTLRS----CESPYVVKCYGAF-YKEGEISIVLEYMDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLHTKRH 120 (264)
T ss_pred HHHHHHHHh----cCCCCeeeEEEEE-ccCCeEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhccCC
Confidence 112222222 2222222222222 2346679999999999998764332 22333 34567889999999999 99
Q ss_pred ceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 008643 264 LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 264 i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~ 343 (558)
++|+|+||+||+++.+|.++++|||++..+....... ....+...|++|+....+..+..+|+|++|..+++++
T Consensus 121 ~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~------~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~ 194 (264)
T cd06623 121 IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQC------NTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECA 194 (264)
T ss_pred CccCCCCHHHEEECCCCCEEEccCccceecccCCCcc------cceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHH
Confidence 9999999999999999999999999998775433221 1123567788999998888888999999999999999
Q ss_pred Hhh
Q 008643 344 QNS 346 (558)
Q Consensus 344 ~~~ 346 (558)
.+.
T Consensus 195 tg~ 197 (264)
T cd06623 195 LGK 197 (264)
T ss_pred hCC
Confidence 753
No 193
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.85 E-value=2.3e-21 Score=194.53 Aligned_cols=200 Identities=18% Similarity=0.219 Sum_probs=133.9
Q ss_pred ChHhhhcccCcceeeeeeccEEEEEEEcCCCcEEEEEEecCCCh--hhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHH
Q 008643 97 PLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIE--PIIYRDLFLFRTLASFLNGISIQKLGCNAELIVD 174 (558)
Q Consensus 97 ~~~~~f~~~~~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~--~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~ 174 (558)
+++..|+.. +.||+|++|+||+|+.+.+++.||+|+...... ..+..++.+++.+.
T Consensus 3 ~~~~~y~~~--~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~-------------------- 60 (272)
T cd06637 3 DPAGIFELV--ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYS-------------------- 60 (272)
T ss_pred ChhhhhhHH--HheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhc--------------------
Confidence 344555443 679999999999999988999999998753311 11222222111110
Q ss_pred HHHHhhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCC--HHHHHHHH
Q 008643 175 EFGEKLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGID--VGGFLTVG 251 (558)
Q Consensus 175 e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~--~~~~~~~~ 251 (558)
.|+|+.++.+.+..... .......+++|||+.|++|.+...... ...+ ....+..|
T Consensus 61 --------------~h~~i~~~~~~~~~~~~-------~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~q 119 (272)
T cd06637 61 --------------HHRNIATYYGAFIKKNP-------PGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICRE 119 (272)
T ss_pred --------------CCCCeeeEeeEEeecCC-------CCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHH
Confidence 13333333222211100 001234689999999999987644322 1223 23456789
Q ss_pred HHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-----CCC
Q 008643 252 VSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-----GFL 326 (558)
Q Consensus 252 v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-----g~~ 326 (558)
++.++.|||+.|++|+|+||+||+++.++.++++|||++..+....... ....+++.|++|++... +.+
T Consensus 120 i~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~~~------~~~~g~~~y~aPE~~~~~~~~~~~~ 193 (272)
T cd06637 120 ILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRR------NTFIGTPYWMAPEVIACDENPDATY 193 (272)
T ss_pred HHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceecccccccC------CcccccccccCHhHhccccCcCCCC
Confidence 9999999999999999999999999999999999999988764422110 12236778899998752 346
Q ss_pred CCCCCcccHHHHHHHHHHh
Q 008643 327 AKGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 327 ~~~~Di~~l~~~l~~l~~~ 345 (558)
+..+|+|++|+.+++++.+
T Consensus 194 ~~~~Dv~slGv~l~el~~g 212 (272)
T cd06637 194 DFKSDLWSLGITAIEMAEG 212 (272)
T ss_pred CchhhHHHHHHHHHHHHhC
Confidence 6789999999999999974
No 194
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.85 E-value=3.1e-21 Score=193.83 Aligned_cols=205 Identities=18% Similarity=0.143 Sum_probs=135.5
Q ss_pred hcccCcceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhH
Q 008643 102 FSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLL 181 (558)
Q Consensus 102 f~~~~~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~ 181 (558)
|.++..++||.|++|+||+|....+|+.||||..+.........+. ...+..+.+.
T Consensus 1 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~------------------------~~~~~~~~~~ 56 (272)
T cd06629 1 FKWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDS------------------------RQKDMVKALR 56 (272)
T ss_pred CceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccch------------------------HHHHHHHHHH
Confidence 4456678999999999999999888999999987532111000000 0000111112
Q ss_pred hhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHH
Q 008643 182 EELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLL 260 (558)
Q Consensus 182 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh 260 (558)
.| .. ....+.+.+.+.+... .......+++|||++|++|.+...... ........+..+++.++.++|
T Consensus 57 ~e------~~----~l~~l~h~~i~~~~~~-~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH 125 (272)
T cd06629 57 SE------IE----TLKDLDHLNIVQYLGF-ETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLH 125 (272)
T ss_pred HH------HH----HHHhcCCCCcceEEEE-eccCCceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh
Confidence 22 11 2223333333333222 233456789999999999877543221 122233456789999999999
Q ss_pred HCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCC--CCCCCCcccHHHH
Q 008643 261 EFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGF--LAKGTDVSPIIPA 338 (558)
Q Consensus 261 ~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~--~~~~~Di~~l~~~ 338 (558)
+.|++|+|+||+||+++.+|.++++|||++.......... ......++..|++|+....+. .+..+|+|++|..
T Consensus 126 ~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~ 201 (272)
T cd06629 126 SKGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDND----QNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCV 201 (272)
T ss_pred hCCeeecCCChhhEEEcCCCeEEEeecccccccccccccc----ccccccCCccccCHHHhccccCCCCccchhHHHHHH
Confidence 9999999999999999999999999999987654321110 011234667788998877654 6778999999999
Q ss_pred HHHHHHh
Q 008643 339 LEAIWQN 345 (558)
Q Consensus 339 l~~l~~~ 345 (558)
+++++.+
T Consensus 202 l~~l~~g 208 (272)
T cd06629 202 VLEMFAG 208 (272)
T ss_pred HHHHHhC
Confidence 9999974
No 195
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.85 E-value=2.9e-21 Score=195.36 Aligned_cols=189 Identities=14% Similarity=0.163 Sum_probs=128.7
Q ss_pred ceeeeeeccEEEEEEEcC-----CCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHh
Q 008643 108 QTIAAASLGQVYRATLRE-----TGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLE 182 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~-----~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~ 182 (558)
+.||.|+||.||+|+... ++..||||+.+......... .+..
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~---------------------------------~~~~ 57 (283)
T cd05091 11 EELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLRE---------------------------------EFKH 57 (283)
T ss_pred HHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHH---------------------------------HHHH
Confidence 578999999999998743 35789999987543221110 1111
Q ss_pred hhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC---------------CCCHH--
Q 008643 183 ELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA---------------GIDVG-- 245 (558)
Q Consensus 183 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~---------------~~~~~-- 245 (558)
| . .+...+.+.+.+.+..... .....++++||++++++.+....... ..+..
T Consensus 58 e------~----~~~~~l~h~~iv~~~~~~~-~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (283)
T cd05091 58 E------A----MMRSRLQHPNIVCLLGVVT-KEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADF 126 (283)
T ss_pred H------H----HHHhcCCCCCcCeEEEEEc-CCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHH
Confidence 1 1 1222233333333322222 23456899999999988766432211 12222
Q ss_pred HHHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCC
Q 008643 246 GFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGF 325 (558)
Q Consensus 246 ~~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~ 325 (558)
..+..|++.++.|+|++|++|+|+||.||+++.++.++++|||++..+........ .....+++.|++|+....+.
T Consensus 127 ~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~ 202 (283)
T cd05091 127 VHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKL----MGNSLLPIRWMSPEAIMYGK 202 (283)
T ss_pred HHHHHHHHHHHHHHHHcCccccccchhheEecCCCceEecccccccccccchheee----ccCccCCccccCHHHHhcCC
Confidence 34667999999999999999999999999999999999999999887654322110 01112356799999998888
Q ss_pred CCCCCCcccHHHHHHHHHH
Q 008643 326 LAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 326 ~~~~~Di~~l~~~l~~l~~ 344 (558)
.++.+|+|++|..+++++.
T Consensus 203 ~~~~~Dv~slG~~l~el~~ 221 (283)
T cd05091 203 FSIDSDIWSYGVVLWEVFS 221 (283)
T ss_pred CCcchhHHHHHHHHHHHHc
Confidence 8999999999999999986
No 196
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.84 E-value=1.7e-21 Score=199.88 Aligned_cols=196 Identities=19% Similarity=0.202 Sum_probs=130.3
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|++|.||+|+.+.+++.|++|...+..... .. ....+.+|
T Consensus 6 ~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~-~~------------------------------~~~~~~~e--- 51 (305)
T cd05609 6 IKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLIL-RN------------------------------QIQQVFVE--- 51 (305)
T ss_pred eeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhh-HH------------------------------HHHHHHHH---
Confidence 478999999999999998899999999875431100 00 00011112
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecC--CCceEEEEeeeCCCCCCCHHHHhcC-CCCHHHHHHHHHHHHHHHHHHCC
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRL--SGSRVLVMEWIDGIRCTDPQAIKGA-GIDVGGFLTVGVSAALRQLLEFG 263 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~vLvmE~i~G~~L~d~~~~~~~-~~~~~~~~~~~v~~~L~~Lh~~G 263 (558)
.. ....+.+ +. +++++..+ ....+++|||++|++|.++...... .......+..+++.++.|+|+.|
T Consensus 52 ---~~----~l~~~~~-~~--i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 121 (305)
T cd05609 52 ---RD----ILTFAEN-PF--VVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYG 121 (305)
T ss_pred ---HH----HHHhCCC-CC--eeeeEEEEecCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 11 1122223 32 23444433 3445899999999998776432211 12223446678999999999999
Q ss_pred ceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHH---------HHHHHHHHhcCHHHHHHHHHHcCCCCCCCCccc
Q 008643 264 LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQIL---------IDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSP 334 (558)
Q Consensus 264 i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l---------~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~ 334 (558)
++|+|+||+||+++.+|.++++|||++..........+ .........++..|++|+....+..++.+|+|+
T Consensus 122 i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s 201 (305)
T cd05609 122 IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWA 201 (305)
T ss_pred ccccCCchHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHH
Confidence 99999999999999999999999998763111000000 000001123567789999887777889999999
Q ss_pred HHHHHHHHHHhh
Q 008643 335 IIPALEAIWQNS 346 (558)
Q Consensus 335 l~~~l~~l~~~~ 346 (558)
+|+.+++++.+.
T Consensus 202 lG~vl~el~~g~ 213 (305)
T cd05609 202 MGIILYEFLVGC 213 (305)
T ss_pred HHHHHHHHHhCC
Confidence 999999998753
No 197
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.84 E-value=3.7e-21 Score=192.80 Aligned_cols=190 Identities=18% Similarity=0.198 Sum_probs=130.0
Q ss_pred cceeeeeeccEEEEEEEcCC---CcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhh
Q 008643 107 SQTIAAASLGQVYRATLRET---GEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEE 183 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~---G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~E 183 (558)
.+.||+|+||.||+|+++.+ ...||||+.++........+
T Consensus 9 ~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~------------------------------------- 51 (266)
T cd05033 9 EKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLD------------------------------------- 51 (266)
T ss_pred eeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHH-------------------------------------
Confidence 47899999999999998543 45899999876532211111
Q ss_pred hcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHHHHHHHHHHHH
Q 008643 184 LDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVGVSAALRQLLE 261 (558)
Q Consensus 184 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~v~~~L~~Lh~ 261 (558)
|..|... ...+.+...+.+...+. .....+++|||++|++|.+.........+.. ..+..+++.++.+||+
T Consensus 52 --~~~e~~~----l~~l~h~~i~~~~~~~~-~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~ 124 (266)
T cd05033 52 --FLTEASI----MGQFDHPNIIRLEGVVT-KSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSE 124 (266)
T ss_pred --HHHHHHH----HHhCCCCCcceEeEEEe-cCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 1111111 12222222222222222 2345689999999999987654332233333 3466789999999999
Q ss_pred CCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHH
Q 008643 262 FGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEA 341 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~ 341 (558)
.|++|+|+||.||+++.++.++++|||++..+......... ........|++|+....+..++.+|+|++|..+++
T Consensus 125 ~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~----~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~ 200 (266)
T cd05033 125 MNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTT----KGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWE 200 (266)
T ss_pred CCcccCCCCcceEEEcCCCCEEECccchhhcccccccceec----cCCCCCccccChhhhccCCCccccchHHHHHHHHH
Confidence 99999999999999999999999999999887521111000 01123456899999888888899999999999999
Q ss_pred HHH
Q 008643 342 IWQ 344 (558)
Q Consensus 342 l~~ 344 (558)
++.
T Consensus 201 l~~ 203 (266)
T cd05033 201 VMS 203 (266)
T ss_pred HHc
Confidence 875
No 198
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.84 E-value=4.6e-21 Score=191.22 Aligned_cols=186 Identities=18% Similarity=0.167 Sum_probs=128.8
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|++|.||+|.+ .++..||||+.+++.... . . +
T Consensus 11 ~~~ig~g~~~~v~~~~~-~~~~~~~vK~~~~~~~~~---------------------------~--------~------~ 48 (261)
T cd05034 11 ERKLGAGQFGEVWMGTW-NGTTKVAVKTLKPGTMSP---------------------------E--------A------F 48 (261)
T ss_pred eeeeccCcceEEEEEEE-cCCceEEEEEecCCccCH---------------------------H--------H------H
Confidence 46899999999999998 577899999887542210 0 0 1
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCH--HHHHHHHHHHHHHHHHHCC
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDV--GGFLTVGVSAALRQLLEFG 263 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~--~~~~~~~v~~~L~~Lh~~G 263 (558)
..|...+ ..+.+...+.+... .......+++|||++|++|.+...... ...+. ...+..+++.++.+||+.|
T Consensus 49 ~~e~~~l----~~l~h~~i~~~~~~-~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~ 123 (261)
T cd05034 49 LQEAQIM----KKLRHDKLVQLYAV-CSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN 123 (261)
T ss_pred HHHHHHH----hhCCCCCEeeeeee-eecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 1111111 11222222222211 122356799999999999877543322 12233 3456788999999999999
Q ss_pred ceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 008643 264 LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 264 i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~ 343 (558)
++|+|+||+||+++.++.++++|||.+..+........ .....+..|++|+....+..++.+|+|++|..+++++
T Consensus 124 i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~-----~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~ 198 (261)
T cd05034 124 YIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAR-----EGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIV 198 (261)
T ss_pred cccCCcchheEEEcCCCCEEECccccceeccchhhhhh-----hccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHH
Confidence 99999999999999999999999999887764221110 1112345688999988788888999999999999998
Q ss_pred H
Q 008643 344 Q 344 (558)
Q Consensus 344 ~ 344 (558)
+
T Consensus 199 t 199 (261)
T cd05034 199 T 199 (261)
T ss_pred h
Confidence 6
No 199
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.84 E-value=1.8e-21 Score=194.14 Aligned_cols=186 Identities=15% Similarity=0.125 Sum_probs=128.8
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||.|++|.||+|.. .++..+|||+.+++.... + . +
T Consensus 9 ~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~~~-------------------------------~----~------~ 46 (256)
T cd05059 9 LKELGSGQFGVVHLGKW-RGKIDVAIKMIREGAMSE-------------------------------D----D------F 46 (256)
T ss_pred hhhhccCCCceEEEeEe-cCCccEEEEEeccCCCCH-------------------------------H----H------H
Confidence 46799999999999998 477889999876542110 0 0 1
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHHHHHHHHHHHHCCc
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~v~~~L~~Lh~~Gi 264 (558)
..|.. ....+.+...+.+.. +....+..+++|||++|++|.+.........+.. ..+..+++.++.+||+.|+
T Consensus 47 ~~e~~----~l~~l~~~~i~~~~~-~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i 121 (256)
T cd05059 47 IEEAK----VMMKLSHPNLVQLYG-VCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGF 121 (256)
T ss_pred HHHHH----HHHhCCCCCEEEEEE-EEcCCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 11111 112222322222222 2233456799999999999987654332223333 3467889999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
+|+|+||+||+++.+|.++++|||++....+..... .........|++|+....+.++..+|+|++|..+++++.
T Consensus 122 ~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~-----~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~ 196 (256)
T cd05059 122 IHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTS-----SQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFS 196 (256)
T ss_pred ccccccHhhEEECCCCcEEECCcccceecccccccc-----cCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhc
Confidence 999999999999999999999999987664321110 000112346889999888888889999999999999986
No 200
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.84 E-value=2.6e-21 Score=194.66 Aligned_cols=186 Identities=18% Similarity=0.121 Sum_probs=124.1
Q ss_pred ceeeeeeccEEEEEEEcCCCc--EEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhc
Q 008643 108 QTIAAASLGQVYRATLRETGE--DVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELD 185 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~--~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld 185 (558)
+.||+|++|.||+|+++.+|. .+++|..+......... .
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~---------------------------------~------ 41 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHR---------------------------------D------ 41 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHH---------------------------------H------
Confidence 368999999999999977776 46888766432111000 1
Q ss_pred HHHHHHHHHHHHHhcCCCCC-eeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC---------------CCC--HHHH
Q 008643 186 YTLEARNMEDFLENFKDDPT-VKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA---------------GID--VGGF 247 (558)
Q Consensus 186 ~~~Ea~n~~~~~~~~~~~~~-v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~---------------~~~--~~~~ 247 (558)
+..|...+.+ +.+++. +.+...+ ...+..+++|||++|++|.+....... ... ....
T Consensus 42 ~~~E~~~l~~----l~~h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 116 (270)
T cd05047 42 FAGELEVLCK----LGHHPNIINLLGAC-EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 116 (270)
T ss_pred HHHHHHHHHh----hccCCCeeeEEEEE-ecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHH
Confidence 1111121111 212222 2222222 224456999999999998776432210 122 2244
Q ss_pred HHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCC
Q 008643 248 LTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLA 327 (558)
Q Consensus 248 ~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~ 327 (558)
+..+++.++.|||+.|++|+|+||.||+++.++.++++|||++......... .....+..|++|+.......+
T Consensus 117 ~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~~~~-------~~~~~~~~y~apE~~~~~~~~ 189 (270)
T cd05047 117 FAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKK-------TMGRLPVRWMAIESLNYSVYT 189 (270)
T ss_pred HHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCccccchhhhc-------cCCCCccccCChHHHccCCCC
Confidence 6788999999999999999999999999999999999999998643221111 011224568899998888888
Q ss_pred CCCCcccHHHHHHHHHH
Q 008643 328 KGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 328 ~~~Di~~l~~~l~~l~~ 344 (558)
..+|+|++|..++++++
T Consensus 190 ~~~Di~slG~il~el~~ 206 (270)
T cd05047 190 TNSDVWSYGVLLWEIVS 206 (270)
T ss_pred chhhHHHHHHHHHHHHc
Confidence 89999999999999985
No 201
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.84 E-value=1.9e-20 Score=187.24 Aligned_cols=237 Identities=18% Similarity=0.168 Sum_probs=150.3
Q ss_pred eeeeeeccEEEEEEEc--CCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 109 TIAAASLGQVYRATLR--ETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 109 pIg~Gs~GqVy~a~~~--~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.||+|+||.||+|+++ .++..||||+..+........ . +
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~---------------------------------~------~ 42 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRD---------------------------------E------M 42 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHH---------------------------------H------H
Confidence 3899999999999874 345679999987653221110 1 1
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHHHHHHHHHHHHCCc
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~v~~~L~~Lh~~Gi 264 (558)
.+|.. ....+.+.+.+.+..++. ....+++|||++|++|.+.........+.. ..+..+++.++.+||..|+
T Consensus 43 ~~E~~----~l~~l~h~~ii~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 116 (257)
T cd05115 43 MREAE----IMHQLDNPYIVRMIGVCE--AEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNF 116 (257)
T ss_pred HHHHH----HHHhcCCCCeEEEEEEEc--CCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCe
Confidence 11222 222233444444444332 345689999999999987654333333433 3467889999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
+|+|+||+||+++.++.++++|||++..+......... .....+++.|++|+....+..+..+|+|++|..+++++.
T Consensus 117 ~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~ 193 (257)
T cd05115 117 VHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKA---RSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFS 193 (257)
T ss_pred eecccchheEEEcCCCcEEeccCCccccccCCccceec---cCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhc
Confidence 99999999999999999999999998766443221100 000112467889999888888889999999999999885
Q ss_pred hhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 345 NSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 345 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
. ...++...+..++... +....+..+|+....-++.++.. |+..||+-+
T Consensus 194 ~-g~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~li~~---c~~~~~~~R 242 (257)
T cd05115 194 Y-GQKPYKKMKGPEVMSF---IEQGKRLDCPAECPPEMYALMKD---CWIYKWEDR 242 (257)
T ss_pred C-CCCCcCcCCHHHHHHH---HHCCCCCCCCCCCCHHHHHHHHH---HcCCChhhC
Confidence 1 1223333333332222 22223344555444445555544 666677544
No 202
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.84 E-value=2.4e-21 Score=193.93 Aligned_cols=200 Identities=18% Similarity=0.150 Sum_probs=132.9
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||.|+||+||+|.. .+|+.||||..+......... .+....+.+|+
T Consensus 5 ~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~----------------------------~~~~~~~~~e~-- 53 (265)
T cd06631 5 GEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAA----------------------------EKEYEKLQEEV-- 53 (265)
T ss_pred cceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhH----------------------------HHHHHHHHHHH--
Confidence 46799999999999988 689999999876432110000 00001122222
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHCCce
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLEFGLF 265 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~~Gi~ 265 (558)
.. ...+.+.+.+.+...+. .....+++|||++|++|.+...... ...+....+..+++.++.++|+.|++
T Consensus 54 ----~~----l~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~ 124 (265)
T cd06631 54 ----DL----LKSLKHVNIVQYLGTCL-DDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVV 124 (265)
T ss_pred ----HH----HHhcCCCCEeeEeeEee-cCCeEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 21 22223333233332222 2456799999999999987643221 12233344678999999999999999
Q ss_pred ecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHh
Q 008643 266 HGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 266 H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~ 345 (558)
|+|++|+||+++.+|.++++|||++..+.................++..+++|+.......++.+|+|++|..+++++++
T Consensus 125 H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g 204 (265)
T cd06631 125 HRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATG 204 (265)
T ss_pred cCCcCHHhEEECCCCeEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhC
Confidence 99999999999999999999999987653211000000001123467788999998877788899999999999999985
Q ss_pred h
Q 008643 346 S 346 (558)
Q Consensus 346 ~ 346 (558)
.
T Consensus 205 ~ 205 (265)
T cd06631 205 K 205 (265)
T ss_pred C
Confidence 3
No 203
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.84 E-value=1.4e-21 Score=197.26 Aligned_cols=236 Identities=16% Similarity=0.155 Sum_probs=148.5
Q ss_pred eeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHHHH
Q 008643 110 IAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYTLE 189 (558)
Q Consensus 110 Ig~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~~E 189 (558)
||+|+||.||+|..+.+|+.||+|+.......... .+..+..|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~-------------------------------------~~~~~~~e 43 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRK-------------------------------------GEQMALNE 43 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhh-------------------------------------hhHHHHHH
Confidence 68999999999999889999999987643211000 00011122
Q ss_pred HHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHH--HHHHHHHHHHHHHHHHCCcee
Q 008643 190 ARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVG--GFLTVGVSAALRQLLEFGLFH 266 (558)
Q Consensus 190 a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~--~~~~~~v~~~L~~Lh~~Gi~H 266 (558)
...+ ..+.+...+.+...+ ......+++|||++|++|.+...... ...+.. ..+..+++.++.+||..|++|
T Consensus 44 ~~~l----~~l~~~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H 118 (277)
T cd05577 44 KKIL----EKVSSRFIVSLAYAF-ETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVY 118 (277)
T ss_pred HHHH----HhCCCCCEeeeeeEE-ecCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 2222 222222222222222 23456799999999999976543322 133433 345679999999999999999
Q ss_pred cCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHhh
Q 008643 267 GDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNS 346 (558)
Q Consensus 267 ~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~~ 346 (558)
+|++|.||+++.++.++++|||.+..+...... ....++..+++|+....+..+..+|+|++|..+++++.+.
T Consensus 119 ~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~-------~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~ 191 (277)
T cd05577 119 RDLKPENVLLDDHGNVRISDLGLAVELKGGKKI-------KGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGR 191 (277)
T ss_pred CCCCHHHEEECCCCCEEEccCcchhhhccCCcc-------ccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCC
Confidence 999999999999999999999998765432111 1123566788999988777888899999999999998753
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCC
Q 008643 347 SGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDF 399 (558)
Q Consensus 347 ~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~ 399 (558)
. ++...+.......+.+.....+...|+.+..-++.++.. |+..||+-
T Consensus 192 ~--p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~---~l~~~p~~ 239 (277)
T cd05577 192 S--PFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEA---LLQKDPEK 239 (277)
T ss_pred C--CCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHH---HccCChhH
Confidence 3 222211111112233333334444554444444555433 44555543
No 204
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.84 E-value=2.8e-21 Score=190.05 Aligned_cols=188 Identities=22% Similarity=0.246 Sum_probs=135.8
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.++||+|++|.||+|..+.+|+.|++|+.+....... ..+
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~----------------------------------~~~------ 44 (253)
T cd05122 5 LEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKK----------------------------------EKI------ 44 (253)
T ss_pred eeeeccCCceEEEEEEECCCCcEEEEEEecccchhHH----------------------------------HHH------
Confidence 4689999999999999987899999999876532100 011
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHHHHHHHHHHHHCCc
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~v~~~L~~Lh~~Gi 264 (558)
.+|.. ....+.+...+.+.. ........+++|||++|++|.+.........+.. ..+..++..++.+||..|+
T Consensus 45 ~~e~~----~l~~l~~~~i~~~~~-~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i 119 (253)
T cd05122 45 INEIQ----ILKKCKHPNIVKYYG-SYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGI 119 (253)
T ss_pred HHHHH----HHHhCCCCCEeEEEE-EEecCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCE
Confidence 11111 122222222222222 2222466799999999999987654432233333 3467789999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
+|+|++|+||+++.+|.++|+|||.+..+..... .....++..+++|+....+..+...|+|++|..++++++
T Consensus 120 ~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-------~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~ 192 (253)
T cd05122 120 IHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA-------RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAE 192 (253)
T ss_pred ecCCCCHHHEEEccCCeEEEeecccccccccccc-------ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHh
Confidence 9999999999999999999999999988776432 012246778899999988888889999999999999997
Q ss_pred hh
Q 008643 345 NS 346 (558)
Q Consensus 345 ~~ 346 (558)
+.
T Consensus 193 g~ 194 (253)
T cd05122 193 GK 194 (253)
T ss_pred CC
Confidence 43
No 205
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.84 E-value=9.7e-21 Score=188.26 Aligned_cols=192 Identities=20% Similarity=0.170 Sum_probs=134.3
Q ss_pred eeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHHH-
Q 008643 110 IAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYTL- 188 (558)
Q Consensus 110 Ig~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~~- 188 (558)
||+|++|+||+|+...+|+.|++|+........ .+....+.+|++...
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~-------------------------------~~~~~~~~~e~~~l~~ 49 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIR-------------------------------KNQVDQVLTERDILSQ 49 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhh-------------------------------hhHHHHHHHHHHHHHh
Confidence 589999999999998789999999876532110 001111222222211
Q ss_pred -HHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHCCcee
Q 008643 189 -EARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLEFGLFH 266 (558)
Q Consensus 189 -Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~~Gi~H 266 (558)
.|+|+.++...+.... ..+++|||++|++|.++..... ........+..|++.+|.+||+.|++|
T Consensus 50 ~~h~~i~~~~~~~~~~~-------------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H 116 (265)
T cd05579 50 AQSPYVVKLYYSFQGKK-------------NLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIH 116 (265)
T ss_pred CCCcchhHHHHheecCc-------------EEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeec
Confidence 2677777776655433 3489999999999877543222 122233457789999999999999999
Q ss_pred cCCCCCCEEEecCCCeEEeecCcccccChhhHHH--HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 267 GDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQI--LIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 267 ~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~--l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
+|++|.||+++.++.++++|||++.......... ..........++..+++|+....+..+...|+|++|..++++++
T Consensus 117 ~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~ 196 (265)
T cd05579 117 RDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLV 196 (265)
T ss_pred CCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHh
Confidence 9999999999999999999999887543321100 00000112235677889998887778888999999999999997
Q ss_pred h
Q 008643 345 N 345 (558)
Q Consensus 345 ~ 345 (558)
+
T Consensus 197 g 197 (265)
T cd05579 197 G 197 (265)
T ss_pred C
Confidence 4
No 206
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.84 E-value=3e-21 Score=198.56 Aligned_cols=188 Identities=21% Similarity=0.246 Sum_probs=134.7
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|+||.||+|....+|..||+|..+....... ...+..|++
T Consensus 6 ~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~---------------------------------~~~~~~E~~- 51 (308)
T cd06615 6 LGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAI---------------------------------RNQIIRELK- 51 (308)
T ss_pred EeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHH---------------------------------HHHHHHHHH-
Confidence 4679999999999999988999999998765432111 111122221
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHH-CCc
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLE-FGL 264 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~-~Gi 264 (558)
....+.+.+.+.+...+.. ....+++|||++|++|.++..... ...+....+..+++.++.|||+ +|+
T Consensus 52 ---------~l~~l~h~~iv~~~~~~~~-~~~~~lv~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i 121 (308)
T cd06615 52 ---------VLHECNSPYIVGFYGAFYS-DGEISICMEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKI 121 (308)
T ss_pred ---------HHHhCCCCCCCeEEEEEee-CCEEEEEeeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCE
Confidence 1222233333333333322 456699999999999987643221 1223345678899999999997 699
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
+|+|+||+||+++.+|.++++|||++..+..... ....++..+++|+.......+..+|+|++|..+++++.
T Consensus 122 ~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~--------~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~ 193 (308)
T cd06615 122 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--------NSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAI 193 (308)
T ss_pred EECCCChHHEEEecCCcEEEccCCCccccccccc--------ccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHh
Confidence 9999999999999999999999999876643221 12245678889999887778889999999999999997
Q ss_pred hh
Q 008643 345 NS 346 (558)
Q Consensus 345 ~~ 346 (558)
+.
T Consensus 194 g~ 195 (308)
T cd06615 194 GR 195 (308)
T ss_pred CC
Confidence 54
No 207
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.84 E-value=2.3e-20 Score=186.01 Aligned_cols=230 Identities=19% Similarity=0.232 Sum_probs=150.5
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|++|.||+|.. .|..||+|..+..... + ++
T Consensus 11 ~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~~~~------------------------------------~------~~ 46 (256)
T cd05082 11 LQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATA------------------------------------Q------AF 46 (256)
T ss_pred eeeecccCCCeEEEEEE--cCCcEEEEEeCCCchH------------------------------------H------HH
Confidence 47899999999999987 5889999987543110 0 01
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCC-CCHH--HHHHHHHHHHHHHHHHCC
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAG-IDVG--GFLTVGVSAALRQLLEFG 263 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~-~~~~--~~~~~~v~~~L~~Lh~~G 263 (558)
..|... ...+.+.+.+.+...+....+..+++|||++|++|.+........ .+.. ..+..+++.++.+||..|
T Consensus 47 ~~e~~~----l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 122 (256)
T cd05082 47 LAEASV----MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN 122 (256)
T ss_pred HHHHHH----HHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 112222 222334444444444444445679999999999998764332221 2222 346678999999999999
Q ss_pred ceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 008643 264 LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 264 i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~ 343 (558)
++|+|+||+||+++.+|.++++|||++........ ....+..|++|+....+.++..+|+|++|..+++++
T Consensus 123 i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~---------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~ 193 (256)
T cd05082 123 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD---------TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY 193 (256)
T ss_pred EeccccchheEEEcCCCcEEecCCccceeccccCC---------CCccceeecCHHHHccCCCCchhhhHHHHHHHHHHH
Confidence 99999999999999999999999999876543221 112345689999998888888999999999999998
Q ss_pred HhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 344 QNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 344 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
+. ...++...+...+...+ ...++..+|+.....++.++.. |...+|+-+
T Consensus 194 ~~-g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~---~l~~~p~~R 243 (256)
T cd05082 194 SF-GRVPYPRIPLKDVVPRV---EKGYKMDAPDGCPPVVYDVMKQ---CWHLDAATR 243 (256)
T ss_pred hC-CCCCCCCCCHHHHHHHH---hcCCCCCCCCCCCHHHHHHHHH---HhcCChhhC
Confidence 62 11133333443333322 2233444444444445555543 555666544
No 208
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.84 E-value=2e-21 Score=207.63 Aligned_cols=94 Identities=16% Similarity=0.093 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCC
Q 008643 247 FLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFL 326 (558)
Q Consensus 247 ~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~ 326 (558)
.+..|++.++.|||..|++|+|+||.||+++.++.++++|||++..+........ .....+...|++|+.+..+..
T Consensus 241 ~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~ 316 (400)
T cd05105 241 SFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVS----KGSTFLPVKWMAPESIFDNLY 316 (400)
T ss_pred HHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccc----cCCcCCCcceEChhhhcCCCC
Confidence 3667899999999999999999999999999999999999999887643321100 011123466899999888888
Q ss_pred CCCCCcccHHHHHHHHHH
Q 008643 327 AKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 327 ~~~~Di~~l~~~l~~l~~ 344 (558)
++.+|+|++|+.+++++.
T Consensus 317 ~~~~DiwSlGvil~ellt 334 (400)
T cd05105 317 TTLSDVWSYGILLWEIFS 334 (400)
T ss_pred CchhhHHHHHHHHHHHHH
Confidence 899999999999999985
No 209
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.84 E-value=2.1e-21 Score=193.86 Aligned_cols=186 Identities=15% Similarity=0.154 Sum_probs=130.2
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|++|.||+|.. .++..||+|...+.-.. . +.+.
T Consensus 11 ~~~lg~g~~g~v~~~~~-~~~~~v~iK~~~~~~~~---~--------------------------------~~~~----- 49 (261)
T cd05072 11 VKKLGAGQFGEVWMGYY-NNSTKVAVKTLKPGTMS---V--------------------------------QAFL----- 49 (261)
T ss_pred eeecCCcCCceEEEEEe-cCCceEEEEEccCCchh---H--------------------------------HHHH-----
Confidence 36899999999999998 57889999987653211 0 0111
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHH--HHHHHHHHHHHHHHHHCC
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVG--GFLTVGVSAALRQLLEFG 263 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~--~~~~~~v~~~L~~Lh~~G 263 (558)
.|... ...+.+.+.+.+.. +.......+++|||++|++|.+...... ...+.. ..+..+++.++.|||..|
T Consensus 50 -~e~~~----l~~l~h~~i~~~~~-~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~ 123 (261)
T cd05072 50 -EEANL----MKTLQHDKLVRLYA-VVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN 123 (261)
T ss_pred -HHHHH----HHhCCCCCeeeEEE-EEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 11111 12223333222222 2233456789999999999987654322 223332 346688999999999999
Q ss_pred ceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 008643 264 LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 264 i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~ 343 (558)
++|+|++|+||+++.++.++++|||.+..+....... .....++..|++|+....+..++.+|+|++|..+++++
T Consensus 124 i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~ 198 (261)
T cd05072 124 YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTA-----REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIV 198 (261)
T ss_pred eeccccchhhEEecCCCcEEECCCccceecCCCceec-----cCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHH
Confidence 9999999999999999999999999998765432110 00112345689999998888888999999999999998
Q ss_pred H
Q 008643 344 Q 344 (558)
Q Consensus 344 ~ 344 (558)
+
T Consensus 199 t 199 (261)
T cd05072 199 T 199 (261)
T ss_pred c
Confidence 6
No 210
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.84 E-value=6.8e-21 Score=189.71 Aligned_cols=185 Identities=22% Similarity=0.240 Sum_probs=132.2
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChh---hHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhh
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEP---IIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEE 183 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~---~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~E 183 (558)
.++||.|++|.||+|....+++.+++|+....... .+..++.+++.
T Consensus 8 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~------------------------------- 56 (262)
T cd06613 8 IQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKE------------------------------- 56 (262)
T ss_pred EEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHh-------------------------------
Confidence 47899999999999999888999999998643221 11111111111
Q ss_pred hcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHHHHHHHHHHHH
Q 008643 184 LDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVGVSAALRQLLE 261 (558)
Q Consensus 184 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~v~~~L~~Lh~ 261 (558)
+ .|+|+.++.+. + ......+++|||++|++|.++........+.. ..+..+++.++.+||+
T Consensus 57 ~----~h~~i~~~~~~------------~-~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~ 119 (262)
T cd06613 57 C----RHPNIVAYFGS------------Y-LRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHE 119 (262)
T ss_pred C----CCCChhceEEE------------E-EeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 0 13333333222 2 22455689999999999987654432334433 4467889999999999
Q ss_pred CCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC---CCCCCCCcccHHHH
Q 008643 262 FGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLG---FLAKGTDVSPIIPA 338 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g---~~~~~~Di~~l~~~ 338 (558)
.|++|+|++|.||+++.+|.++++|||++..+....... ....++..+++|+..... ..+..+|+|++|..
T Consensus 120 ~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~------~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~ 193 (262)
T cd06613 120 TGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKR------KSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGIT 193 (262)
T ss_pred CCceecCCChhhEEECCCCCEEECccccchhhhhhhhcc------ccccCCccccCchhhcccccCCcCchhhhHHHHHH
Confidence 999999999999999999999999999988765432110 112356678899988766 67788999999999
Q ss_pred HHHHHHh
Q 008643 339 LEAIWQN 345 (558)
Q Consensus 339 l~~l~~~ 345 (558)
+++++++
T Consensus 194 l~~~~tg 200 (262)
T cd06613 194 AIELAEL 200 (262)
T ss_pred HHHHHhC
Confidence 9999974
No 211
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.84 E-value=3.4e-21 Score=191.00 Aligned_cols=188 Identities=19% Similarity=0.237 Sum_probs=130.3
Q ss_pred ceeeeeeccEEEEEEEcCCC----cEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhh
Q 008643 108 QTIAAASLGQVYRATLRETG----EDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEE 183 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G----~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~E 183 (558)
+.||.|+||+||+|+...++ ..||+|+.++....... ..+..|
T Consensus 5 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~---------------------------------~~~~~e 51 (258)
T smart00219 5 KKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQI---------------------------------EEFLRE 51 (258)
T ss_pred ceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHH---------------------------------HHHHHH
Confidence 68999999999999997655 89999998765322100 011111
Q ss_pred hcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCC-CCHH--HHHHHHHHHHHHHHH
Q 008643 184 LDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAG-IDVG--GFLTVGVSAALRQLL 260 (558)
Q Consensus 184 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~-~~~~--~~~~~~v~~~L~~Lh 260 (558)
+ . +...+.+...+.+...+ ...+..+++|||++|++|.+........ .+.. ..+..+++.++.+||
T Consensus 52 ~------~----~l~~l~~~~i~~~~~~~-~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh 120 (258)
T smart00219 52 A------R----IMRKLDHPNIVKLLGVC-TEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLE 120 (258)
T ss_pred H------H----HHHhcCCCchheEEEEE-cCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHh
Confidence 1 1 11222222222222211 2235679999999999998764432221 3333 446788999999999
Q ss_pred HCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHH
Q 008643 261 EFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALE 340 (558)
Q Consensus 261 ~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~ 340 (558)
+.|++|+|++|+||+++.++.++++|||++.......... . ....+++.+++|+....+..+..+|+|++|..++
T Consensus 121 ~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~--~---~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~ 195 (258)
T smart00219 121 SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYK--K---KGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLW 195 (258)
T ss_pred cCCeeecccccceEEEccCCeEEEcccCCceecccccccc--c---ccCCCcccccChHHhccCCCCcchhHHHHHHHHH
Confidence 9999999999999999999999999999998776441110 0 0112456788999888888899999999999999
Q ss_pred HHHH
Q 008643 341 AIWQ 344 (558)
Q Consensus 341 ~l~~ 344 (558)
+++.
T Consensus 196 ~l~~ 199 (258)
T smart00219 196 EIFT 199 (258)
T ss_pred HHHh
Confidence 9986
No 212
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.84 E-value=1.2e-20 Score=191.02 Aligned_cols=189 Identities=15% Similarity=0.148 Sum_probs=129.1
Q ss_pred eeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHHH
Q 008643 109 TIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYTL 188 (558)
Q Consensus 109 pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~~ 188 (558)
.||+|++|.||+|+...+|+.||+|+..+.....-..+. .+..
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~-------------------------------------~~~~ 43 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGET-------------------------------------LALN 43 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHH-------------------------------------HHHH
Confidence 379999999999999888999999987653211000000 0011
Q ss_pred HHHHHHHHHHhcCCCCCee-eceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCC--HHHHHHHHHHHHHHHHHHCCce
Q 008643 189 EARNMEDFLENFKDDPTVK-IPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGID--VGGFLTVGVSAALRQLLEFGLF 265 (558)
Q Consensus 189 Ea~n~~~~~~~~~~~~~v~-vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~--~~~~~~~~v~~~L~~Lh~~Gi~ 265 (558)
|... .+..... +++.+. ....+ ......++||||++|++|.+..... ..++ ....+..|++.++.|||+.|++
T Consensus 44 ~~~~-~~~~~~~-~~~~i~~~~~~~-~~~~~~~~v~e~~~g~~L~~~l~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~i~ 119 (278)
T cd05606 44 ERIM-LSLVSTG-DCPFIVCMSYAF-HTPDKLSFILDLMNGGDLHYHLSQH-GVFSEAEMRFYAAEIILGLEHMHNRFVV 119 (278)
T ss_pred HHHH-HHHHHhC-CCCcEeeeeeee-ecCCEEEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence 1111 1111111 223221 11111 2234568999999999997654322 1223 3345778999999999999999
Q ss_pred ecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcccHHHHHHHHHH
Q 008643 266 HGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLG-FLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 266 H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g-~~~~~~Di~~l~~~l~~l~~ 344 (558)
|+|++|.||+++.++.++++|||++..+...... ...++..|++|+....+ ..+..+|+|++|..++++++
T Consensus 120 H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~--------~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~ 191 (278)
T cd05606 120 YRDLKPANILLDEHGHVRISDLGLACDFSKKKPH--------ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLR 191 (278)
T ss_pred cCCCCHHHEEECCCCCEEEccCcCccccCccCCc--------CcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHh
Confidence 9999999999999999999999998766543221 22467889999998755 46788999999999999997
Q ss_pred hh
Q 008643 345 NS 346 (558)
Q Consensus 345 ~~ 346 (558)
+.
T Consensus 192 g~ 193 (278)
T cd05606 192 GH 193 (278)
T ss_pred CC
Confidence 53
No 213
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.84 E-value=4.3e-21 Score=191.03 Aligned_cols=181 Identities=19% Similarity=0.185 Sum_probs=129.0
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||.|++|.||+|.. .|+.||||..+.... . .+.+..|++
T Consensus 11 ~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~-~----------------------------------~~~~~~e~~- 52 (256)
T cd05039 11 GATIGKGEFGDVMLGDY--RGQKVAVKCLKDDST-A----------------------------------AQAFLAEAS- 52 (256)
T ss_pred eeeeecCCCceEEEEEe--cCcEEEEEEeccchh-H----------------------------------HHHHHHHHH-
Confidence 47899999999999998 489999998765421 0 001111211
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc---CCCCHHHHHHHHHHHHHHHHHHCC
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG---AGIDVGGFLTVGVSAALRQLLEFG 263 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~---~~~~~~~~~~~~v~~~L~~Lh~~G 263 (558)
+...+.+.+.+.+...+. ..+..+++|||++|++|.+...... ........+..+++.++.+||..|
T Consensus 53 ---------~l~~l~~~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~ 122 (256)
T cd05039 53 ---------VMTTLRHPNLVQLLGVVL-QGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN 122 (256)
T ss_pred ---------HHHhcCCcceeeeEEEEc-CCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 112222222232222222 2566799999999999987644332 122333456789999999999999
Q ss_pred ceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 008643 264 LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 264 i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~ 343 (558)
++|+|+||+||+++.+|.++++|||.+........ .......+++|+....+..+..+|+|++|..+++++
T Consensus 123 i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~---------~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~ 193 (256)
T cd05039 123 FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD---------SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY 193 (256)
T ss_pred ccchhcccceEEEeCCCCEEEcccccccccccccc---------cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999987743321 112345678899888888888999999999999998
Q ss_pred H
Q 008643 344 Q 344 (558)
Q Consensus 344 ~ 344 (558)
.
T Consensus 194 ~ 194 (256)
T cd05039 194 S 194 (256)
T ss_pred h
Confidence 5
No 214
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.84 E-value=1e-20 Score=198.40 Aligned_cols=189 Identities=19% Similarity=0.217 Sum_probs=128.6
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChh-----hHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEP-----IIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLL 181 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~-----~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~ 181 (558)
.+.||+|++|.||+|+.+.+|+.||||+....... .+..++.+++.+
T Consensus 21 ~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l---------------------------- 72 (353)
T cd07850 21 LKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLV---------------------------- 72 (353)
T ss_pred EEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhc----------------------------
Confidence 47899999999999999889999999986432111 111111111110
Q ss_pred hhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 008643 182 EELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLE 261 (558)
Q Consensus 182 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~ 261 (558)
.|+|+.++...+...... +.....++||||++| ++.+.... .........+..|++.+|.+||.
T Consensus 73 -------~h~~iv~~~~~~~~~~~~-------~~~~~~~lv~e~~~~-~l~~~~~~-~l~~~~~~~~~~ql~~aL~~LH~ 136 (353)
T cd07850 73 -------NHKNIIGLLNVFTPQKSL-------EEFQDVYLVMELMDA-NLCQVIQM-DLDHERMSYLLYQMLCGIKHLHS 136 (353)
T ss_pred -------CCCCCcceeeeeccCCCc-------cccCcEEEEEeccCC-CHHHHHhh-cCCHHHHHHHHHHHHHHHHHHHh
Confidence 133333333222211100 111345899999976 44433211 12233344577899999999999
Q ss_pred CCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHH
Q 008643 262 FGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEA 341 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~ 341 (558)
.|++|+|+||+||+++.+|.++++|||++......... ....++..|++|+.......+..+|+|++|+.+++
T Consensus 137 ~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~ 209 (353)
T cd07850 137 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-------TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 209 (353)
T ss_pred CCeeeCCCCHHHEEECCCCCEEEccCccceeCCCCCCC-------CCCcccccccCHHHHhCCCCCCchhhHhHHHHHHH
Confidence 99999999999999999999999999999876543211 11134667889999988888899999999999999
Q ss_pred HHHhh
Q 008643 342 IWQNS 346 (558)
Q Consensus 342 l~~~~ 346 (558)
++.+.
T Consensus 210 l~~g~ 214 (353)
T cd07850 210 MIRGT 214 (353)
T ss_pred HHHCC
Confidence 99743
No 215
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.84 E-value=4.2e-20 Score=186.63 Aligned_cols=237 Identities=17% Similarity=0.178 Sum_probs=146.7
Q ss_pred cceeeeeeccEEEEEEEcCCCc----EEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHh
Q 008643 107 SQTIAAASLGQVYRATLRETGE----DVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLE 182 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~----~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~ 182 (558)
.+.||+|++|.||+|++..+|+ .||||+.+......... .
T Consensus 12 ~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~---------------------------------~--- 55 (279)
T cd05109 12 VKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANK---------------------------------E--- 55 (279)
T ss_pred eeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHH---------------------------------H---
Confidence 3789999999999999877776 48999876543221111 0
Q ss_pred hhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCH--HHHHHHHHHHHHHHHH
Q 008643 183 ELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDV--GGFLTVGVSAALRQLL 260 (558)
Q Consensus 183 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~--~~~~~~~v~~~L~~Lh 260 (558)
+..|... ...+.++..+.+-... .....+++|||++++++.+.........+. ...+..+++.++.|||
T Consensus 56 ---~~~e~~~----l~~~~~~~i~~~~~~~--~~~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH 126 (279)
T cd05109 56 ---ILDEAYV----MAGVGSPYVCRLLGIC--LTSTVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLE 126 (279)
T ss_pred ---HHHHHHH----HHhcCCCCCceEEEEE--cCCCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1111111 1122222222111111 234568999999999987654332222333 3346789999999999
Q ss_pred HCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHH
Q 008643 261 EFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALE 340 (558)
Q Consensus 261 ~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~ 340 (558)
+.|++|+|+||+||+++.++.++|+|||++..+......... ........|++|+....+.++..+|+|++|..++
T Consensus 127 ~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~----~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~ 202 (279)
T cd05109 127 EVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHA----DGGKVPIKWMALESILHRRFTHQSDVWSYGVTVW 202 (279)
T ss_pred HCCeeccccccceEEEcCCCcEEECCCCceeecccccceeec----CCCccchhhCCHHHhccCCCCchhHHHHHHHHHH
Confidence 999999999999999999999999999999877543211000 0012346788999988787888999999999999
Q ss_pred HHHHhhcCCCCCCCCHHHHHHHHHHHHHh-cCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 341 AIWQNSSGKGLADFNFRSVTGQFNKLVYN-YRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 341 ~l~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
++++. ...++.......+.. .+.. .....|+.+..-++.++.. |+..||+-+
T Consensus 203 el~t~-g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~li~~---~l~~dp~~R 255 (279)
T cd05109 203 ELMTF-GAKPYDGIPAREIPD----LLEKGERLPQPPICTIDVYMIMVK---CWMIDSECR 255 (279)
T ss_pred HHHcC-CCCCCCCCCHHHHHH----HHHCCCcCCCCccCCHHHHHHHHH---HcCCChhhC
Confidence 98762 112333333333222 2222 2233344444444444443 666666554
No 216
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.84 E-value=3.9e-21 Score=197.98 Aligned_cols=191 Identities=17% Similarity=0.210 Sum_probs=126.5
Q ss_pred cCcceeeeeeccEEEEEEEc--CCCcEEEEEEecCC-ChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhH
Q 008643 105 ISSQTIAAASLGQVYRATLR--ETGEDVAIKVQRPG-IEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLL 181 (558)
Q Consensus 105 ~~~~pIg~Gs~GqVy~a~~~--~~G~~VAVKv~rp~-~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~ 181 (558)
++.+.||.|+||.||+|+.+ .+++.||+|+.+.. ....+.+++.+++.+
T Consensus 4 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l---------------------------- 55 (317)
T cd07868 4 YEGCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLREL---------------------------- 55 (317)
T ss_pred ccccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhc----------------------------
Confidence 33568999999999999974 36789999987643 222222333222221
Q ss_pred hhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc--------CCCC--HHHHHHHH
Q 008643 182 EELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG--------AGID--VGGFLTVG 251 (558)
Q Consensus 182 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~--------~~~~--~~~~~~~~ 251 (558)
.|+|+.++...+... .....+++|||+++ .+.+...... ...+ ....+..|
T Consensus 56 -------~h~niv~~~~~~~~~-----------~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q 116 (317)
T cd07868 56 -------KHPNVISLQKVFLSH-----------ADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQ 116 (317)
T ss_pred -------CCCCCcceeeeEecC-----------CCcEEEEEEeccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHH
Confidence 144444443333211 12345899999976 4433322111 0122 23457889
Q ss_pred HHHHHHHHHHCCceecCCCCCCEEEe----cCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-CCC
Q 008643 252 VSAALRQLLEFGLFHGDPHPGNIFAM----RDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-GFL 326 (558)
Q Consensus 252 v~~~L~~Lh~~Gi~H~DlhPgNIlv~----~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-g~~ 326 (558)
++.||.|||+.|++|+|+||+||+++ .+|.++|+|||++..+....... . -.....++..|+||+++.. ...
T Consensus 117 i~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~-~--~~~~~~~t~~y~aPE~~~~~~~~ 193 (317)
T cd07868 117 ILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPL-A--DLDPVVVTFWYRAPELLLGARHY 193 (317)
T ss_pred HHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccc-c--ccCCccccccccCCHHHcCCCCc
Confidence 99999999999999999999999994 56799999999998765432110 0 0011235778999998865 456
Q ss_pred CCCCCcccHHHHHHHHHHh
Q 008643 327 AKGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 327 ~~~~Di~~l~~~l~~l~~~ 345 (558)
+..+|+|++|+.+++++.+
T Consensus 194 ~~~~DiwslG~il~el~~g 212 (317)
T cd07868 194 TKAIDIWAIGCIFAELLTS 212 (317)
T ss_pred CchhhHHHHHHHHHHHHhC
Confidence 7889999999999999975
No 217
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.84 E-value=1.5e-21 Score=208.57 Aligned_cols=228 Identities=17% Similarity=0.154 Sum_probs=163.3
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
...+|.|||+.|.++..+.+++..+||++.... .....+..++. +
T Consensus 327 ~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~-~~~~~e~~~~~----------------------------------~ 371 (612)
T KOG0603|consen 327 REELGEGSFSAVKYCESSPTDQEPAVKIISKRA-DDNQDEIPISL----------------------------------L 371 (612)
T ss_pred ccccCCCCccceeeeeccccccchhheeccccc-cccccccchhh----------------------------------h
Confidence 345999999999999999999999999875431 11111111111 1
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHCCcee
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGLFH 266 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi~H 266 (558)
...|+|+......+.+...+ ++|||.++|+.+.+..............|..++..++.|||++|+||
T Consensus 372 ~~~h~niv~~~~v~~~~~~~-------------~~v~e~l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~gvvh 438 (612)
T KOG0603|consen 372 VRDHPNIVKSHDVYEDGKEI-------------YLVMELLDGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQGVVH 438 (612)
T ss_pred hcCCCcceeecceecCCcee-------------eeeehhccccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcCeee
Confidence 12367777766666665544 99999999988876543333222233458899999999999999999
Q ss_pred cCCCCCCEEE-ecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHh
Q 008643 267 GDPHPGNIFA-MRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 267 ~DlhPgNIlv-~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~ 345 (558)
||+||+|||+ +..|+++|+|||..+.+.++. -.-+-+-.|.||++...--+++..|+|++|..||+|+.+
T Consensus 439 RDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~---------~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G 509 (612)
T KOG0603|consen 439 RDLKPGNILLDGSAGHLRLTYFGFWSELERSC---------DTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTG 509 (612)
T ss_pred cCCChhheeecCCCCcEEEEEechhhhCchhh---------cccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhC
Confidence 9999999999 588999999999999988761 111236678899999988889999999999999999986
Q ss_pred hcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCCh
Q 008643 346 SSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKF 401 (558)
Q Consensus 346 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~~ 401 (558)
.......+-+ .++...+...++. ...+..+|+|++. +++.||.-++
T Consensus 510 ~tp~~~~P~~-----~ei~~~i~~~~~s--~~vS~~AKdLl~~---LL~~dP~~Rl 555 (612)
T KOG0603|consen 510 RTLFAAHPAG-----IEIHTRIQMPKFS--ECVSDEAKDLLQQ---LLQVDPALRL 555 (612)
T ss_pred CCccccCCch-----HHHHHhhcCCccc--cccCHHHHHHHHH---hccCChhhCc
Confidence 4433222221 2333333333333 6777888888877 7888886664
No 218
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.84 E-value=6.7e-21 Score=188.77 Aligned_cols=232 Identities=16% Similarity=0.160 Sum_probs=164.1
Q ss_pred hhcccC-cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHh
Q 008643 101 VFSKIS-SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEK 179 (558)
Q Consensus 101 ~f~~~~-~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~ 179 (558)
-..+|+ ...||.|||+.|..+++++|.+.+|+||.+..+.. -.-|..++-.
T Consensus 248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~n-----------------------ddedidwvqt----- 299 (593)
T KOG0695|consen 248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVN-----------------------DDEDIDWVQT----- 299 (593)
T ss_pred ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcC-----------------------CcccchhHHh-----
Confidence 345666 67999999999999999999999999997654321 1111111111
Q ss_pred hHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCC-HHHHhcCCCCHHHHHHHHHHHHHHH
Q 008643 180 LLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTD-PQAIKGAGIDVGGFLTVGVSAALRQ 258 (558)
Q Consensus 180 l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d-~~~~~~~~~~~~~~~~~~v~~~L~~ 258 (558)
.+ ...+.-.++|.+.=-+-.....++.++|.||++|++|.- ....++...+-++++...++.+|.|
T Consensus 300 ----------ek---~vfe~asn~pflvglhscfqtesrlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~f 366 (593)
T KOG0695|consen 300 ----------EK---HVFEQASNNPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNF 366 (593)
T ss_pred ----------hH---HHHHhccCCCeEEehhhhhcccceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHH
Confidence 11 111222233333222223333566799999999999853 3344555666678899999999999
Q ss_pred HHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHH
Q 008643 259 LLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPA 338 (558)
Q Consensus 259 Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~ 338 (558)
||+.||+.||+|..|+|++..|++|+.|+||++.--...- ...+++|++.|+||++++...+...+|.|++|+.
T Consensus 367 lh~rgiiyrdlkldnvlldaeghikltdygmcke~l~~gd------~tstfcgtpnyiapeilrgeeygfsvdwwalgvl 440 (593)
T KOG0695|consen 367 LHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGD------TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVL 440 (593)
T ss_pred HhhcCeeeeeccccceEEccCCceeecccchhhcCCCCCc------ccccccCCCcccchhhhcccccCceehHHHHHHH
Confidence 9999999999999999999999999999999986422111 1356789999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCCCC-CH-HHHHHHHHHHHHhcCCCCchhHH
Q 008643 339 LEAIWQNSSGKGLADF-NF-RSVTGQFNKLVYNYRIRIPERFS 379 (558)
Q Consensus 339 l~~l~~~~~~~~~~~~-~~-~~l~~~l~~~~~~~~~~lP~~~~ 379 (558)
+.+|+.+..+...-.. |- ..--+.+++++.+..+++|..++
T Consensus 441 mfemmagrspfdivgm~n~d~ntedylfqvilekqiriprsls 483 (593)
T KOG0695|consen 441 MFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPRSLS 483 (593)
T ss_pred HHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccceee
Confidence 9999875332211111 10 11235577788888999998765
No 219
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.84 E-value=9.4e-21 Score=191.31 Aligned_cols=188 Identities=21% Similarity=0.206 Sum_probs=131.1
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||.|++|+||+|+.+.++..||+|+.+........ ++.
T Consensus 11 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~----------------------------------------~~~ 50 (280)
T cd06611 11 GELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELE----------------------------------------DFM 50 (280)
T ss_pred HHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHH----------------------------------------HHH
Confidence 5799999999999999888999999998654221110 011
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCC--CCHHHHHHHHHHHHHHHHHHCCce
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAG--IDVGGFLTVGVSAALRQLLEFGLF 265 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~--~~~~~~~~~~v~~~L~~Lh~~Gi~ 265 (558)
.|.. ....+.+...+.+...+. .....+++|||++|++|.+........ .+....+..+++.++.|||+.|++
T Consensus 51 ~e~~----~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~ 125 (280)
T cd06611 51 VEID----ILSECKHPNIVGLYEAYF-YENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVI 125 (280)
T ss_pred HHHH----HHHhCCCCceeEEEEEEe-cCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 1211 222233333333333222 245669999999999997764432222 333455778999999999999999
Q ss_pred ecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-----CCCCCCCCcccHHHHHH
Q 008643 266 HGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-----GFLAKGTDVSPIIPALE 340 (558)
Q Consensus 266 H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-----g~~~~~~Di~~l~~~l~ 340 (558)
|+|+||.||+++.+|.++++|||++.......... ....+++.|++|+.... ...+..+|+|++|..++
T Consensus 126 h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~------~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~ 199 (280)
T cd06611 126 HRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKR------DTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLI 199 (280)
T ss_pred cCCCChhhEEECCCCCEEEccCccchhhccccccc------ceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHH
Confidence 99999999999999999999999887654322111 11236777889988753 23456799999999999
Q ss_pred HHHHhh
Q 008643 341 AIWQNS 346 (558)
Q Consensus 341 ~l~~~~ 346 (558)
+++.+.
T Consensus 200 ~l~~g~ 205 (280)
T cd06611 200 ELAQME 205 (280)
T ss_pred HHHhCC
Confidence 998743
No 220
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.84 E-value=1e-21 Score=200.87 Aligned_cols=189 Identities=20% Similarity=0.162 Sum_probs=133.2
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|++|.||+|+.+.+|+.||+|.......... +.+.
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~----------------------------------~~~~----- 64 (297)
T cd06656 24 FEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKK----------------------------------ELII----- 64 (297)
T ss_pred eeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchH----------------------------------HHHH-----
Confidence 3689999999999999988999999998754321100 0011
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHCCcee
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGLFH 266 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi~H 266 (558)
.|.. ......+.+.+.+.. +.......+++|||++|+++.+..............+..+++.++.+||+.|++|
T Consensus 65 -~e~~----~l~~~~h~~i~~~~~-~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H 138 (297)
T cd06656 65 -NEIL----VMRENKNPNIVNYLD-SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQVIH 138 (297)
T ss_pred -HHHH----HHHhCCCCCEeeEEE-EEecCCEEEEeecccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 1111 111222222222222 2233556799999999999987643221122233446678999999999999999
Q ss_pred cCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHhh
Q 008643 267 GDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNS 346 (558)
Q Consensus 267 ~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~~ 346 (558)
+|+||+||+++.+|.++++|||++.......... ....+++.|++|+....+..++.+|+|++|+.+++++++.
T Consensus 139 ~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~ 212 (297)
T cd06656 139 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR------STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE 212 (297)
T ss_pred CCCCHHHEEECCCCCEEECcCccceEccCCccCc------CcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999988765443211 1223677889999988887888999999999999999853
No 221
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.84 E-value=4e-21 Score=191.95 Aligned_cols=185 Identities=15% Similarity=0.118 Sum_probs=127.5
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||+|++|.||.|.. .++..||||..+.+.... . ++.
T Consensus 10 ~~lg~G~~~~vy~~~~-~~~~~~aik~~~~~~~~~---------------------------~--------------~~~ 47 (256)
T cd05113 10 KELGTGQFGVVKYGKW-RGQYDVAIKMIKEGSMSE---------------------------D--------------EFI 47 (256)
T ss_pred eEecCcccceEEEEEe-cCCCcEEEEEcCCCcccH---------------------------H--------------HHH
Confidence 5799999999999988 466679999876532100 0 011
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHHHHHHHHHHHHCCce
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVGVSAALRQLLEFGLF 265 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~v~~~L~~Lh~~Gi~ 265 (558)
+|...+ ..+.+.+-+.+...+ ......+++|||+.|++|.+.........+.. ..+..+++.++.+||+.|++
T Consensus 48 ~e~~~l----~~l~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 122 (256)
T cd05113 48 EEAKVM----MKLSHEKLVQLYGVC-TKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFI 122 (256)
T ss_pred HHHHHH----hcCCCCCeeeEEEEE-ccCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 122221 122222222222222 22345699999999999887643322233333 44678899999999999999
Q ss_pred ecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 266 HGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 266 H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
|+|+||+||+++.++.++++|||.+..+........ ....++..|++|+....+..+..+|+|++|..++++++
T Consensus 123 H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~-----~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~ 196 (256)
T cd05113 123 HRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSS-----VGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYS 196 (256)
T ss_pred ccccCcceEEEcCCCCEEECCCccceecCCCceeec-----CCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhc
Confidence 999999999999999999999999876643211100 00123467889999888888889999999999999986
No 222
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.84 E-value=6.7e-21 Score=189.05 Aligned_cols=186 Identities=20% Similarity=0.198 Sum_probs=134.3
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|++|.||+|+.+.+|+.|++|..+.... ...+.+|
T Consensus 8 ~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~------------------------------------~~~~~~e--- 48 (256)
T cd06612 8 LEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED------------------------------------LQEIIKE--- 48 (256)
T ss_pred hhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH------------------------------------HHHHHHH---
Confidence 3679999999999999987799999998754311 0011112
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCH--HHHHHHHHHHHHHHHHHCCc
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDV--GGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~--~~~~~~~v~~~L~~Lh~~Gi 264 (558)
...+. .+.+.+.+.+...+.+ ....+++|||++|++|.+.........+. ...+..+++.++.+||..|+
T Consensus 49 ---~~~~~----~l~~~~i~~~~~~~~~-~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i 120 (256)
T cd06612 49 ---ISILK----QCDSPYIVKYYGSYFK-NTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKK 120 (256)
T ss_pred ---HHHHH----hCCCCcEeeeeeeeec-CCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 22211 2223333333332222 35568999999999998765433333333 34567889999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
+|+|++|+||+++.+|.++++|||++..+....... ....++..+++|+.......+..+|+|++|..+++++.
T Consensus 121 ~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~ 194 (256)
T cd06612 121 IHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKR------NTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAE 194 (256)
T ss_pred ccCCCCcceEEECCCCcEEEcccccchhcccCcccc------ccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHh
Confidence 999999999999999999999999998876543211 11235778899999888778888999999999999997
Q ss_pred h
Q 008643 345 N 345 (558)
Q Consensus 345 ~ 345 (558)
+
T Consensus 195 g 195 (256)
T cd06612 195 G 195 (256)
T ss_pred C
Confidence 4
No 223
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.84 E-value=3.1e-20 Score=184.76 Aligned_cols=189 Identities=18% Similarity=0.217 Sum_probs=130.5
Q ss_pred ceeeeeeccEEEEEEEcC-CCc--EEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhh
Q 008643 108 QTIAAASLGQVYRATLRE-TGE--DVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEEL 184 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~-~G~--~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~El 184 (558)
+.||+|++|.||+|.+.. +|+ .||||+.+++..... .+.+..|+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~---------------------------------~~~~~~e~ 47 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDI---------------------------------MDDFLKEA 47 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHH---------------------------------HHHHHHHH
Confidence 468999999999999854 333 699999877543200 00111111
Q ss_pred cHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHH--HHHHHHHHHHHHHHHH
Q 008643 185 DYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVG--GFLTVGVSAALRQLLE 261 (558)
Q Consensus 185 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~--~~~~~~v~~~L~~Lh~ 261 (558)
. ....+.+.+.+.+...+.. ...+++|||++|++|.+...... ...+.. ..+..|++.+|.++|.
T Consensus 48 ------~----~l~~l~h~~iv~~~~~~~~--~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~ 115 (257)
T cd05040 48 ------A----IMHSLDHENLIRLYGVVLT--HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLES 115 (257)
T ss_pred ------H----HHhhcCCCCccceeEEEcC--CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHh
Confidence 1 2222233333333333333 56789999999999987643322 123333 3356789999999999
Q ss_pred CCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHH
Q 008643 262 FGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEA 341 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~ 341 (558)
.|++|+|+||+||+++.++.++++|||++..+.......... ....++..|++|+......++..+|+|++|..+++
T Consensus 116 ~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~---~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~e 192 (257)
T cd05040 116 KRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVME---EHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWE 192 (257)
T ss_pred CCccccccCcccEEEecCCEEEeccccccccccccccceecc---cCCCCCceecCHHHhcccCcCchhhhHHHHHHHHH
Confidence 999999999999999999999999999998775432110000 01235667899999888788889999999999999
Q ss_pred HHH
Q 008643 342 IWQ 344 (558)
Q Consensus 342 l~~ 344 (558)
+++
T Consensus 193 l~t 195 (257)
T cd05040 193 MFT 195 (257)
T ss_pred HHh
Confidence 986
No 224
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.84 E-value=7.7e-20 Score=184.70 Aligned_cols=237 Identities=17% Similarity=0.162 Sum_probs=153.3
Q ss_pred ceeeeeeccEEEEEEEcCCCc----EEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhh
Q 008643 108 QTIAAASLGQVYRATLRETGE----DVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEE 183 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~----~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~E 183 (558)
+.||+|+||+||+|.++.+|+ .||+|+..........
T Consensus 13 ~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~--------------------------------------- 53 (279)
T cd05057 13 KVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKAN--------------------------------------- 53 (279)
T ss_pred ceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHH---------------------------------------
Confidence 689999999999999876665 5899987654321000
Q ss_pred hcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHHHHHHHHHHHH
Q 008643 184 LDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVGVSAALRQLLE 261 (558)
Q Consensus 184 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~v~~~L~~Lh~ 261 (558)
..+.+|...+.+ +.+.+.+.+..... +...+++|||++|++|.+.........+.. ..+..+++.++.|||+
T Consensus 54 ~~~~~e~~~l~~----l~h~~i~~~~~~~~--~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~ 127 (279)
T cd05057 54 KEILDEAYVMAS----VDHPHVVRLLGICL--SSQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEE 127 (279)
T ss_pred HHHHHHHHHHHh----CCCCCcceEEEEEe--cCceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 011222232222 23443344443333 367799999999999987644332233333 3466899999999999
Q ss_pred CCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHH
Q 008643 262 FGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEA 341 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~ 341 (558)
.|++|+|+||+||+++.++.++++|||++..+........ .........|++|+....+..+..+|+|++|..+++
T Consensus 128 ~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~----~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~e 203 (279)
T cd05057 128 KRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYH----AEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWE 203 (279)
T ss_pred CCEEecccCcceEEEcCCCeEEECCCcccccccCccccee----cCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHH
Confidence 9999999999999999999999999999987764322110 001112456889998888888889999999999999
Q ss_pred HHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 342 IWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 342 l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
+++. ...++...+..++...+ ....++..|+.....++.++.. |+..||+-+
T Consensus 204 l~~~-g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~---~l~~~p~~R 255 (279)
T cd05057 204 LMTF-GAKPYEGIPAVEIPDLL---EKGERLPQPPICTIDVYMVLVK---CWMIDAESR 255 (279)
T ss_pred HhcC-CCCCCCCCCHHHHHHHH---hCCCCCCCCCCCCHHHHHHHHH---HcCCChhhC
Confidence 8861 12233444444433322 2233444555444444555443 666666544
No 225
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.84 E-value=8.1e-22 Score=209.55 Aligned_cols=219 Identities=20% Similarity=0.173 Sum_probs=162.3
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhh-----HHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPI-----IYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLL 181 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~-----i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~ 181 (558)
.+.||+|.||.|..|++..+|..||||++....... ..+++.+|+.
T Consensus 61 ~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~----------------------------- 111 (596)
T KOG0586|consen 61 IKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKS----------------------------- 111 (596)
T ss_pred eeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHh-----------------------------
Confidence 468999999999999999999999999886542211 2233333322
Q ss_pred hhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC-CCCHHHHHHHHHHHHHHHHH
Q 008643 182 EELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA-GIDVGGFLTVGVSAALRQLL 260 (558)
Q Consensus 182 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~-~~~~~~~~~~~v~~~L~~Lh 260 (558)
.+|+|+++++..+.....+ |+||||+.|+.+.++...... ....++.++.|+.++++|||
T Consensus 112 ------l~HPnIvkl~~v~~t~~~l-------------ylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH 172 (596)
T KOG0586|consen 112 ------LNHPNIVKLFSVIETEATL-------------YLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCH 172 (596)
T ss_pred ------cCCcceeeeeeeeeeccee-------------EEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHh
Confidence 2488888877766555444 999999999999886543222 23445678899999999999
Q ss_pred HCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-CCCCCCCCcccHHHHH
Q 008643 261 EFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-GFLAKGTDVSPIIPAL 339 (558)
Q Consensus 261 ~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-g~~~~~~Di~~l~~~l 339 (558)
.++|+|||||..|++++.+-+++|+|||++..+.... +....+|.+.|.||++... .+..|.+|+|+++..+
T Consensus 173 ~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~-------~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvl 245 (596)
T KOG0586|consen 173 SKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGL-------MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVL 245 (596)
T ss_pred hcceeccccchhhcccccccceeeeccccceeecccc-------cccccCCCCCccChHhhcCcccCCcceehhhhhhhh
Confidence 9999999999999999999999999999999887543 3456789999999998874 6778999999999999
Q ss_pred HHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHH
Q 008643 340 EAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLL 386 (558)
Q Consensus 340 ~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~ 386 (558)
|.+..+..+ |+... +..+..-+..+.+++|-+++--.+.++
T Consensus 246 y~LV~GsLP-----FDG~~-lk~Lr~rvl~gk~rIp~~ms~dce~lL 286 (596)
T KOG0586|consen 246 YALVEGSLP-----FDGQN-LKELRPRVLRGKYRIPFYMSCDCEDLL 286 (596)
T ss_pred eeeeecccc-----cCCcc-cccccchheeeeecccceeechhHHHH
Confidence 998875432 32222 223334444566677766555555544
No 226
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.84 E-value=9e-21 Score=191.82 Aligned_cols=187 Identities=22% Similarity=0.199 Sum_probs=130.1
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||.|++|.||+|....+|..+++|.......+... ++.
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~----------------------------------------~~~ 50 (282)
T cd06643 11 GELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELE----------------------------------------DYM 50 (282)
T ss_pred hhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHH----------------------------------------HHH
Confidence 5799999999999999888999999987544221110 011
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHHHHHHHHHHHHCCce
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVGVSAALRQLLEFGLF 265 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~v~~~L~~Lh~~Gi~ 265 (558)
+|.. ....+.+.+.+.+...+. .....+++|||++|+++.+.........+.. ..+..+++.+|.+||+.|++
T Consensus 51 ~e~~----~l~~l~h~~ii~~~~~~~-~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~ 125 (282)
T cd06643 51 VEID----ILASCDHPNIVKLLDAFY-YENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKII 125 (282)
T ss_pred HHHH----HHHHCCCCCeeeEEEEEe-eCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 1111 122233333333333332 2456799999999998866433222233333 45678899999999999999
Q ss_pred ecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHH-----cCCCCCCCCcccHHHHHH
Q 008643 266 HGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTR-----LGFLAKGTDVSPIIPALE 340 (558)
Q Consensus 266 H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~-----~g~~~~~~Di~~l~~~l~ 340 (558)
|+|+||.||+++.+|+++++|||++......... .....++..|++|++.. ....+..+|+|++|+.++
T Consensus 126 H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~ 199 (282)
T cd06643 126 HRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQR------RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLI 199 (282)
T ss_pred ecCCCcccEEEccCCCEEEccccccccccccccc------cccccccccccCHhhccccCCCCCCCCccchhhhHHHHHH
Confidence 9999999999999999999999998765432111 01124677899999874 344566899999999999
Q ss_pred HHHHh
Q 008643 341 AIWQN 345 (558)
Q Consensus 341 ~l~~~ 345 (558)
+++.+
T Consensus 200 el~~g 204 (282)
T cd06643 200 EMAQI 204 (282)
T ss_pred HHccC
Confidence 99864
No 227
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.84 E-value=3.8e-22 Score=212.32 Aligned_cols=239 Identities=20% Similarity=0.247 Sum_probs=163.7
Q ss_pred cceeeeeeccEEEEEEEcCCCc----EEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHh
Q 008643 107 SQTIAAASLGQVYRATLRETGE----DVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLE 182 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~----~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~ 182 (558)
.+.||+|.||.||+|+++..+. .||||..+-... ..+ .+
T Consensus 162 ~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~--~~~-----------------------------------~~ 204 (474)
T KOG0194|consen 162 GKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSE--LTK-----------------------------------EQ 204 (474)
T ss_pred cceeecccccEEEEEEEEecCCceeeeeEEEeeccccc--ccH-----------------------------------HH
Confidence 5789999999999999975433 389997663110 000 01
Q ss_pred hhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHHHHHHHHHHH
Q 008643 183 ELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVGVSAALRQLL 260 (558)
Q Consensus 183 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~v~~~L~~Lh 260 (558)
-.+|.+||+-+ ..+.|.+.|.+-.| .......+++||+|+||+|.++..-....++.. ..+..+.++||+|||
T Consensus 205 ~~e~m~EArvM----r~l~H~NVVr~yGV-a~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh 279 (474)
T KOG0194|consen 205 IKEFMKEARVM----RQLNHPNVVRFYGV-AVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLH 279 (474)
T ss_pred HHHHHHHHHHH----HhCCCCCEEEEEEE-EcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHH
Confidence 12244555533 33444444433332 234567799999999999998754433234443 346788999999999
Q ss_pred HCCceecCCCCCCEEEecCCCeEEeecCcccccChhhH-HHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHH
Q 008643 261 EFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNK-QILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPAL 339 (558)
Q Consensus 261 ~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~-~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l 339 (558)
..+++||||-..|+|++.++.+||+|||+++.-+.... .... .--..++||+.+..|.+++.+|+|++|+.+
T Consensus 280 ~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~~~~~-------klPirWLAPEtl~~~~~s~kTDV~sfGV~~ 352 (474)
T KOG0194|consen 280 SKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMKKFLK-------KLPIRWLAPETLNTGIFSFKTDVWSFGVLL 352 (474)
T ss_pred HCCCcchhHhHHHheecCCCeEEeCccccccCCcceeeccccc-------cCcceecChhhhccCccccccchhheeeeE
Confidence 99999999999999999999999999999876542111 0000 123568899999999999999999999999
Q ss_pred HHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 340 EAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 340 ~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
+++++.-.. |+...+..++...+. ...|+.++|+.-...++.++.. |...||+.+
T Consensus 353 ~Eif~~g~~-Py~g~~~~~v~~kI~--~~~~r~~~~~~~p~~~~~~~~~---c~~~~p~~R 407 (474)
T KOG0194|consen 353 WEIFENGAE-PYPGMKNYEVKAKIV--KNGYRMPIPSKTPKELAKVMKQ---CWKKDPEDR 407 (474)
T ss_pred EeeeccCCC-CCCCCCHHHHHHHHH--hcCccCCCCCCCHHHHHHHHHH---hccCChhhc
Confidence 999986444 667777666555432 2345555555555555555543 888888765
No 228
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.84 E-value=5.6e-21 Score=188.99 Aligned_cols=190 Identities=21% Similarity=0.221 Sum_probs=135.7
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.++||+|++|.||+|+.+.+|+.|+||......... . ....+.+|
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~------------------------------~~~~~~~e--- 49 (254)
T cd06627 5 GDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKE--E------------------------------ALKSIMQE--- 49 (254)
T ss_pred eeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCH--H------------------------------HHHHHHHH---
Confidence 478999999999999998889999999886542210 0 00111112
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHHHHHHHHHHHHCCc
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~v~~~L~~Lh~~Gi 264 (558)
.. ....+.+...+.+...+ ......+++|||++|++|.+..... ...+.. ..+..+++.++.++|+.|+
T Consensus 50 ---~~----~l~~l~~~~i~~~~~~~-~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~i 120 (254)
T cd06627 50 ---ID----LLKNLKHPNIVKYIGSI-ETSDSLYIILEYAENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLHEQGV 120 (254)
T ss_pred ---HH----HHHhCCCCCccEEEEEE-EeCCEEEEEEecCCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHhhCCc
Confidence 12 22222333323222222 2246678999999999887754322 223333 3467889999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
+|+|+||+||+++.+|.++++|||++......... .....++..|++|+.......+...|+|++|..+++++.
T Consensus 121 ~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~ 194 (254)
T cd06627 121 IHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD------DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLT 194 (254)
T ss_pred ccCCCCHHHEEECCCCCEEEeccccceecCCCccc------ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHh
Confidence 99999999999999999999999999887664432 112346778999999887777888999999999999997
Q ss_pred hh
Q 008643 345 NS 346 (558)
Q Consensus 345 ~~ 346 (558)
+.
T Consensus 195 g~ 196 (254)
T cd06627 195 GN 196 (254)
T ss_pred CC
Confidence 43
No 229
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.84 E-value=6.6e-22 Score=196.56 Aligned_cols=189 Identities=21% Similarity=0.282 Sum_probs=135.4
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||+|++|.||+|+.+.+|+.||+|+............ ...
T Consensus 5 ~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~--------------------------------~~~------ 46 (260)
T PF00069_consen 5 KKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEERE--------------------------------ENI------ 46 (260)
T ss_dssp EEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHH--------------------------------HHH------
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccc--------------------------------hhh------
Confidence 689999999999999998999999999876532211100 000
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCC--HHHHHHHHHHHHHHHHHHCCce
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGID--VGGFLTVGVSAALRQLLEFGLF 265 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~--~~~~~~~~v~~~L~~Lh~~Gi~ 265 (558)
.|...+.+ +.+...+.+..++.. ....+++|||++|++|.++.. .....+ ....+..+++.+|.+||+.|++
T Consensus 47 ~e~~~~~~----l~~~~i~~~~~~~~~-~~~~~~v~~~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~ 120 (260)
T PF00069_consen 47 REIKILRR----LRHPNIVQILDVFQD-DNYLYIVMEYCPGGSLQDYLQ-KNKPLSEEEILKIAYQILEALAYLHSKGIV 120 (260)
T ss_dssp HHHHHHHH----HTBTTBCHEEEEEEE-SSEEEEEEEEETTEBHHHHHH-HHSSBBHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred hhhhcccc----ccccccccccccccc-ccccccccccccccccccccc-cccccccccccccccccccccccccccccc
Confidence 12222222 233333333333333 677789999999998877654 223333 3345778999999999999999
Q ss_pred ecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHH-cCCCCCCCCcccHHHHHHHHHH
Q 008643 266 HGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTR-LGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 266 H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~-~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
|+|+||+||+++.+|.++++|||.+..+...... .....++..+.+|+... ....+..+|+|++|..+++++.
T Consensus 121 H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~ 194 (260)
T PF00069_consen 121 HRDIKPENILLDENGEVKLIDFGSSVKLSENNEN------FNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLT 194 (260)
T ss_dssp ESSBSGGGEEESTTSEEEESSGTTTEESTSTTSE------BSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccc------cccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999998753211100 01124677889999998 7788889999999999999998
Q ss_pred hh
Q 008643 345 NS 346 (558)
Q Consensus 345 ~~ 346 (558)
+.
T Consensus 195 ~~ 196 (260)
T PF00069_consen 195 GK 196 (260)
T ss_dssp SS
T ss_pred cc
Confidence 43
No 230
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.84 E-value=4e-21 Score=197.78 Aligned_cols=198 Identities=16% Similarity=0.118 Sum_probs=131.6
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|++|.||+|+...+|+.||+|...+...... .. .+.+.
T Consensus 6 ~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~-~~------------------------------~~~~~----- 49 (316)
T cd05574 6 IKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKR-NK------------------------------VKRVL----- 49 (316)
T ss_pred eeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchH-HH------------------------------HHHHH-----
Confidence 3689999999999999988899999998865421110 00 00111
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCH--HHHHHHHHHHHHHHHHHCC
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDV--GGFLTVGVSAALRQLLEFG 263 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~--~~~~~~~v~~~L~~Lh~~G 263 (558)
.|... ...+.+...+.+... .......+++|||+.|++|.++..... ...+. ...+..+++.+|.|||..|
T Consensus 50 -~e~~~----l~~l~~~~i~~~~~~-~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ 123 (316)
T cd05574 50 -TEQEI----LATLDHPFLPTLYAS-FQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLG 123 (316)
T ss_pred -HHHHH----HHhCCCCCchhheee-eecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCC
Confidence 11111 112222221111111 123455699999999999987644221 12333 3346689999999999999
Q ss_pred ceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHH----------------HH-------HHHHhcCHHHHHHHH
Q 008643 264 LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILID----------------AV-------VHAVNEDYAEMANDF 320 (558)
Q Consensus 264 i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~----------------~~-------~~~~~~d~~~~a~~~ 320 (558)
++|+|+||.||+++.+|.++++|||++............. .. .....++..|++|+.
T Consensus 124 i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~ 203 (316)
T cd05574 124 IVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEV 203 (316)
T ss_pred eeccCCChHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHH
Confidence 9999999999999999999999999987654322110000 00 001124667899999
Q ss_pred HHcCCCCCCCCcccHHHHHHHHHHhh
Q 008643 321 TRLGFLAKGTDVSPIIPALEAIWQNS 346 (558)
Q Consensus 321 ~~~g~~~~~~Di~~l~~~l~~l~~~~ 346 (558)
...+..+..+|+|++|..+++++.+.
T Consensus 204 ~~~~~~~~~~Di~slG~ll~~l~~g~ 229 (316)
T cd05574 204 ISGDGHGSAVDWWTLGILLYEMLYGT 229 (316)
T ss_pred HcCCCCCchHHHHHHHHHHHHHhhCC
Confidence 98887888999999999999999743
No 231
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.84 E-value=3.5e-21 Score=194.33 Aligned_cols=190 Identities=16% Similarity=0.117 Sum_probs=128.4
Q ss_pred cceeeeeeccEEEEEEEc-----CCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhH
Q 008643 107 SQTIAAASLGQVYRATLR-----ETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLL 181 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~-----~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~ 181 (558)
.+.||.|++|+||+|+++ .++..||||+.+......-.
T Consensus 11 ~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~------------------------------------- 53 (277)
T cd05062 11 SRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRER------------------------------------- 53 (277)
T ss_pred eeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHH-------------------------------------
Confidence 367999999999999863 24578999987543211000
Q ss_pred hhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCC---------CCHH--HHHHH
Q 008643 182 EELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAG---------IDVG--GFLTV 250 (558)
Q Consensus 182 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~---------~~~~--~~~~~ 250 (558)
.++.+|.. +...+.+.+.+.+...+ ...+..+++|||++|++|.++....... .+.. ..+..
T Consensus 54 --~~~~~e~~----~l~~l~~~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (277)
T cd05062 54 --IEFLNEAS----VMKEFNCHHVVRLLGVV-SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAG 126 (277)
T ss_pred --HHHHHHHH----HHHhCCCCCeeeEEEEE-cCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHH
Confidence 01111221 22223333333332222 3345679999999999998764322111 1222 23567
Q ss_pred HHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCC
Q 008643 251 GVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGT 330 (558)
Q Consensus 251 ~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~ 330 (558)
+++.++.|||+.|++|+|+||.||+++.++.++++|||++..+........ .....++..|++|+.+..+..++.+
T Consensus 127 ~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~ 202 (277)
T cd05062 127 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVRWMSPESLKDGVFTTYS 202 (277)
T ss_pred HHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECCCCCccccCCcceeec----CCCCccCHhhcChhHhhcCCcCchh
Confidence 899999999999999999999999999999999999999876543211000 0011235679999999988899999
Q ss_pred CcccHHHHHHHHHH
Q 008643 331 DVSPIIPALEAIWQ 344 (558)
Q Consensus 331 Di~~l~~~l~~l~~ 344 (558)
|+|++|..++++++
T Consensus 203 Di~slG~~l~el~~ 216 (277)
T cd05062 203 DVWSFGVVLWEIAT 216 (277)
T ss_pred HHHHHHHHHHHHHc
Confidence 99999999999986
No 232
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.84 E-value=4.3e-21 Score=208.22 Aligned_cols=183 Identities=12% Similarity=0.077 Sum_probs=129.0
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||.|+||.||+|++..+++.||||..... ....++.+++
T Consensus 174 ~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~~---~~~~E~~iL~----------------------------------- 215 (461)
T PHA03211 174 HRALTPGSEGCVFESSHPDYPQRVVVKAGWYA---SSVHEARLLR----------------------------------- 215 (461)
T ss_pred EEEEccCCCeEEEEEEECCCCCEEEEeccccc---CHHHHHHHHH-----------------------------------
Confidence 46899999999999999889999999953211 1112222222
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCH--HHHHHHHHHHHHHHHHHCCc
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDV--GGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~--~~~~~~~v~~~L~~Lh~~Gi 264 (558)
.+.+.+.+.+..++ ...+..+++||++.| .+.+........++. ...+..|++.+|.|||..||
T Consensus 216 ------------~L~HpnIv~l~~~~-~~~~~~~lv~e~~~~-~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gI 281 (461)
T PHA03211 216 ------------RLSHPAVLALLDVR-VVGGLTCLVLPKYRS-DLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGI 281 (461)
T ss_pred ------------HCCCCCCCcEEEEE-EECCEEEEEEEccCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 22233323222222 224566899999965 554432222222333 34577899999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
+|+|+||+|||++.++.++|+|||++..+........ .....|+..|++|+++..+.++..+|+|++|+.+++++.
T Consensus 282 vHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~----~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~ 357 (461)
T PHA03211 282 IHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPF----HYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAV 357 (461)
T ss_pred EECcCCHHHEEECCCCCEEEcccCCceeccccccccc----ccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999976643221110 112357889999999988888889999999999999975
Q ss_pred h
Q 008643 345 N 345 (558)
Q Consensus 345 ~ 345 (558)
.
T Consensus 358 g 358 (461)
T PHA03211 358 H 358 (461)
T ss_pred c
Confidence 3
No 233
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.84 E-value=3.5e-20 Score=185.27 Aligned_cols=233 Identities=17% Similarity=0.202 Sum_probs=151.9
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|++|+||+|.+ .++..||+|..+++... . .. +
T Consensus 11 ~~~ig~g~~~~v~~~~~-~~~~~~~lK~~~~~~~~--~---------------------------------~~------~ 48 (260)
T cd05069 11 DVKLGQGCFGEVWMGTW-NGTTKVAIKTLKPGTMM--P---------------------------------EA------F 48 (260)
T ss_pred eeeecCcCCCeEEEEEE-cCCceEEEEEcccCCcc--H---------------------------------HH------H
Confidence 36799999999999998 45667999987764210 0 00 1
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC-CCCH--HHHHHHHHHHHHHHHHHCC
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA-GIDV--GGFLTVGVSAALRQLLEFG 263 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~-~~~~--~~~~~~~v~~~L~~Lh~~G 263 (558)
.+|. ++...+.+.+.+.+...+. ....+++|||++|++|.+....... ..+. ...+..+++.++.|||+.|
T Consensus 49 ~~E~----~~l~~l~h~~i~~~~~~~~--~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~ 122 (260)
T cd05069 49 LQEA----QIMKKLRHDKLVPLYAVVS--EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMN 122 (260)
T ss_pred HHHH----HHHHhCCCCCeeeEEEEEc--CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 1111 2233334444444433332 3457899999999998776433221 1222 3346778999999999999
Q ss_pred ceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 008643 264 LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 264 i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~ 343 (558)
++|+|+||+||+++.++.++|+|||.+..+........ ....++..|++|+....+..+..+|+|++|..+++++
T Consensus 123 i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~-----~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~ 197 (260)
T cd05069 123 YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTAR-----QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELV 197 (260)
T ss_pred EeecccCcceEEEcCCCeEEECCCccceEccCCccccc-----CCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999977643321100 0112356788999888888888999999999999998
Q ss_pred H-hhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 344 Q-NSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 344 ~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
+ +.. ++...+..+... .+...++...|..+...++.++.. |+..||+-+
T Consensus 198 t~g~~--p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~li~~---~l~~~p~~R 247 (260)
T cd05069 198 TKGRV--PYPGMVNREVLE---QVERGYRMPCPQGCPESLHELMKL---CWKKDPDER 247 (260)
T ss_pred hCCCC--CCCCCCHHHHHH---HHHcCCCCCCCcccCHHHHHHHHH---HccCCcccC
Confidence 6 322 222222222222 223334444455555555555544 666777665
No 234
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.84 E-value=4.6e-21 Score=192.04 Aligned_cols=236 Identities=19% Similarity=0.201 Sum_probs=145.4
Q ss_pred eeeeeeccEEEEEEEcCCC------cEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHh
Q 008643 109 TIAAASLGQVYRATLRETG------EDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLE 182 (558)
Q Consensus 109 pIg~Gs~GqVy~a~~~~~G------~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~ 182 (558)
.||+|++|.||+|+.+..+ +.||||....+...... ..
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~---------------------------------~~--- 45 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEK---------------------------------KE--- 45 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhH---------------------------------HH---
Confidence 6899999999999985433 68999976543211000 00
Q ss_pred hhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc------CCCCHH--HHHHHHHHH
Q 008643 183 ELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG------AGIDVG--GFLTVGVSA 254 (558)
Q Consensus 183 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~------~~~~~~--~~~~~~v~~ 254 (558)
+.+|.. ....+.+..-+.+...+ ......+++|||++|++|.+...... ...+.. ..+..+++.
T Consensus 46 ---~~~e~~----~l~~l~h~~i~~~~~~~-~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 117 (269)
T cd05044 46 ---FLKEAH----LMSNFNHPNIVKLLGVC-LLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAK 117 (269)
T ss_pred ---HHHHHH----HHHhcCCCCeeeEeeee-cCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHH
Confidence 111111 11222233223222222 22445799999999999987643221 112222 346678999
Q ss_pred HHHHHHHCCceecCCCCCCEEEecCC-----CeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCC
Q 008643 255 ALRQLLEFGLFHGDPHPGNIFAMRDG-----RIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKG 329 (558)
Q Consensus 255 ~L~~Lh~~Gi~H~DlhPgNIlv~~dg-----~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~ 329 (558)
++.|+|+.|++|+|+||+||+++.++ .++++|||++..+........ .+....+..|++|+.+..+..++.
T Consensus 118 ~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~ 193 (269)
T cd05044 118 GCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRK----EGEGLLPVRWMAPESLLDGKFTTQ 193 (269)
T ss_pred HHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCccccccccccccccc----CcccCCCccccCHHHHccCCcccc
Confidence 99999999999999999999999887 899999999986643221100 011123467899999998999999
Q ss_pred CCcccHHHHHHHHHH-hhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 330 TDVSPIIPALEAIWQ-NSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 330 ~Di~~l~~~l~~l~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
+|+|++|..++++++ +.. ++...+..+... .+.....+..|..+...++.++.. |+..+|+-+
T Consensus 194 ~Dv~slG~il~ellt~g~~--p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~li~~---~l~~~p~~R 257 (269)
T cd05044 194 SDVWSFGVLMWEILTLGQQ--PYPALNNQEVLQ---HVTAGGRLQKPENCPDKIYQLMTN---CWAQDPSER 257 (269)
T ss_pred hhHHHHHHHHHHHHHcCCC--CCcccCHHHHHH---HHhcCCccCCcccchHHHHHHHHH---HcCCCcccC
Confidence 999999999999986 321 222222222222 222233444454444445555543 555666544
No 235
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.84 E-value=5e-21 Score=193.70 Aligned_cols=183 Identities=19% Similarity=0.198 Sum_probs=131.4
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||+|++|.||+|++..+|+.||||+...+...... ..+.+|+
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~---------------------------------~~~~~E~--- 50 (279)
T cd06619 7 EILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQ---------------------------------KQIMSEL--- 50 (279)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHH---------------------------------HHHHHHH---
Confidence 6899999999999999889999999987644211100 0111121
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHCCceec
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGLFHG 267 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi~H~ 267 (558)
.. ...+.+.+.+.+...+ ......+++|||++|+++... ..........+..+++.++.|||+.|++|+
T Consensus 51 ---~~----l~~l~h~~iv~~~~~~-~~~~~~~lv~e~~~~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~ 119 (279)
T cd06619 51 ---EI----LYKCDSPYIIGFYGAF-FVENRISICTEFMDGGSLDVY---RKIPEHVLGRIAVAVVKGLTYLWSLKILHR 119 (279)
T ss_pred ---HH----HHhCCCCCeeeEEEEE-EECCEEEEEEecCCCCChHHh---hcCCHHHHHHHHHHHHHHHHHHHHCCEeeC
Confidence 11 1122222222222222 224556899999999988543 122223334577899999999999999999
Q ss_pred CCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHh
Q 008643 268 DPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 268 DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~ 345 (558)
|+||.||+++.+|.++++|||++..+...... ...++..|++|+....+..+..+|+|++|..+++++++
T Consensus 120 dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~--------~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g 189 (279)
T cd06619 120 DVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAK--------TYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALG 189 (279)
T ss_pred CCCHHHEEECCCCCEEEeeCCcceeccccccc--------CCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhC
Confidence 99999999999999999999999876543221 23467889999998877788899999999999999974
No 236
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.84 E-value=2.3e-20 Score=186.30 Aligned_cols=238 Identities=17% Similarity=0.164 Sum_probs=149.6
Q ss_pred eeeeeeccEEEEEEE--cCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 109 TIAAASLGQVYRATL--RETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 109 pIg~Gs~GqVy~a~~--~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.||+|+||.||+|.+ +.++..||||+.+........ . +.+..|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~----------------------------~----~~~~~e--- 46 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPAL----------------------------K----DELLRE--- 46 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHH----------------------------H----HHHHHH---
Confidence 589999999999965 357889999997643211000 0 011111
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHCCce
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLEFGLF 265 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~~Gi~ 265 (558)
. .....+.+.+.+.+...+. ....+++|||+++++|.+...... ...+....+..|++.++.++|+.|++
T Consensus 47 ---~----~~l~~l~h~~i~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~ 117 (257)
T cd05116 47 ---A----NVMQQLDNPYIVRMIGICE--AESWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFV 117 (257)
T ss_pred ---H----HHHHhCCCCCcceEEEEEc--CCCcEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 1 1122223333232222221 234589999999999977643222 12233345678999999999999999
Q ss_pred ecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHh
Q 008643 266 HGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 266 H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~ 345 (558)
|+|+||.||+++.++.++++|||++..+......... .....+.+.+++|+....+..+..+|+|++|..++++++.
T Consensus 118 H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~ 194 (257)
T cd05116 118 HRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKA---KTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSY 194 (257)
T ss_pred ecccchhhEEEcCCCeEEECCCccccccCCCCCeeee---cCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999876543211000 0001234678899998888888899999999999999861
Q ss_pred hcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 346 SSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 346 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
...++...+...+...+. ......+|+.....++.++.. |...||+.+
T Consensus 195 -g~~p~~~~~~~~~~~~i~---~~~~~~~~~~~~~~l~~li~~---~~~~~p~~R 242 (257)
T cd05116 195 -GQKPYKGMKGNEVTQMIE---SGERMECPQRCPPEMYDLMKL---CWTYGVDER 242 (257)
T ss_pred -CCCCCCCCCHHHHHHHHH---CCCCCCCCCCCCHHHHHHHHH---HhccCchhC
Confidence 122344444444333322 222334555555555555554 666777655
No 237
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.83 E-value=2.6e-21 Score=193.89 Aligned_cols=187 Identities=20% Similarity=0.190 Sum_probs=130.3
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||+|++|+||+|+...+|+.||+|+.+........ .+.+|+
T Consensus 15 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~----------------------------------~~~~e~--- 57 (267)
T cd06645 15 QRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFA----------------------------------VVQQEI--- 57 (267)
T ss_pred HHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHH----------------------------------HHHHHH---
Confidence 6799999999999999889999999998754221100 001111
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHCCcee
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLEFGLFH 266 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~~Gi~H 266 (558)
.....+.+.+.+.+...+ ......+++|||++|++|.++..... ........+..+++.++.|||..|++|
T Consensus 58 -------~~~~~l~h~~ii~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 129 (267)
T cd06645 58 -------IMMKDCKHSNIVAYFGSY-LRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMH 129 (267)
T ss_pred -------HHHHhCCCCCeeeEEEEE-EeCCEEEEEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 111222222222222222 22455689999999999987643222 122333457788999999999999999
Q ss_pred cCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHH---cCCCCCCCCcccHHHHHHHHH
Q 008643 267 GDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTR---LGFLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 267 ~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~---~g~~~~~~Di~~l~~~l~~l~ 343 (558)
+|+||+||+++.+|.++++|||++..+....... ....+++.|++|+... .+.++..+|+|++|+.+++++
T Consensus 130 ~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~ 203 (267)
T cd06645 130 RDIKGANILLTDNGHVKLADFGVSAQITATIAKR------KSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELA 203 (267)
T ss_pred CCCCHHHEEECCCCCEEECcceeeeEccCccccc------ccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHh
Confidence 9999999999999999999999987664322110 1123677899999874 455677899999999999998
Q ss_pred Hh
Q 008643 344 QN 345 (558)
Q Consensus 344 ~~ 345 (558)
..
T Consensus 204 ~~ 205 (267)
T cd06645 204 EL 205 (267)
T ss_pred cC
Confidence 74
No 238
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.83 E-value=6.2e-21 Score=191.19 Aligned_cols=185 Identities=16% Similarity=0.149 Sum_probs=128.6
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||.|++|.||+|++. ++..||+|+.++..... . ++
T Consensus 11 ~~~lg~g~~~~v~~~~~~-~~~~valK~~~~~~~~~-----------------------------------~------~~ 48 (262)
T cd05071 11 EVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP-----------------------------------E------AF 48 (262)
T ss_pred eeecCCCCCCcEEEEEec-CCceEEEEecccCccCH-----------------------------------H------HH
Confidence 367999999999999984 55679999876532100 0 01
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCC--HHHHHHHHHHHHHHHHHHCC
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGID--VGGFLTVGVSAALRQLLEFG 263 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~--~~~~~~~~v~~~L~~Lh~~G 263 (558)
..|...+. .+.+.+.+.+...+. ....+++|||++|++|.++..... ...+ ....+..+++.+|.++|+.|
T Consensus 49 ~~E~~~l~----~l~~~~i~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~ 122 (262)
T cd05071 49 LQEAQVMK----KLRHEKLVQLYAVVS--EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN 122 (262)
T ss_pred HHHHHHHH----hCCCCCcceEEEEEC--CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 11222221 222333232222221 345689999999999877643221 1122 33456788999999999999
Q ss_pred ceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 008643 264 LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 264 i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~ 343 (558)
++|+|+||+||+++.++.++|+|||.+..+....... .....++..|++|+....+.++..+|+|++|..+++++
T Consensus 123 i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~-----~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ell 197 (262)
T cd05071 123 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-----RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 197 (262)
T ss_pred ccccccCcccEEEcCCCcEEeccCCceeecccccccc-----ccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHH
Confidence 9999999999999999999999999998765432110 01123456789999888888888999999999999998
Q ss_pred H
Q 008643 344 Q 344 (558)
Q Consensus 344 ~ 344 (558)
+
T Consensus 198 t 198 (262)
T cd05071 198 T 198 (262)
T ss_pred c
Confidence 7
No 239
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.83 E-value=5.8e-21 Score=193.28 Aligned_cols=187 Identities=19% Similarity=0.214 Sum_probs=128.4
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCC--hhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhh
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGI--EPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEEL 184 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~--~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~El 184 (558)
.+.||+|++|.||+|+.+.+|+.||+|+.++.. ...+..++.+++
T Consensus 23 ~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~--------------------------------- 69 (286)
T cd06638 23 IETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILK--------------------------------- 69 (286)
T ss_pred eeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHH---------------------------------
Confidence 468999999999999998899999999875421 111111111111
Q ss_pred cHHHHHHHHHHHHHhcCCCCCeeeceeee----cCCCceEEEEeeeCCCCCCCHHHHh---cCCCCH--HHHHHHHHHHH
Q 008643 185 DYTLEARNMEDFLENFKDDPTVKIPRVYK----RLSGSRVLVMEWIDGIRCTDPQAIK---GAGIDV--GGFLTVGVSAA 255 (558)
Q Consensus 185 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~----~~~~~~vLvmE~i~G~~L~d~~~~~---~~~~~~--~~~~~~~v~~~ 255 (558)
++. .+.+.+.+...+. ......+++|||++|++|.+..... ....+. ...+..+++.+
T Consensus 70 ----------~l~---~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~ 136 (286)
T cd06638 70 ----------ALS---DHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMG 136 (286)
T ss_pred ----------HHh---cCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHH
Confidence 110 1222222322221 1124469999999999998754311 112222 23467789999
Q ss_pred HHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-----CCCCCCC
Q 008643 256 LRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-----GFLAKGT 330 (558)
Q Consensus 256 L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-----g~~~~~~ 330 (558)
+.|||..|++|+|+||+||+++.+|.++++|||++..+...... .....++..|++|+.... +.++..+
T Consensus 137 l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~ 210 (286)
T cd06638 137 LQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLR------RNTSVGTPFWMAPEVIACEQQLDSTYDARC 210 (286)
T ss_pred HHHHHhCCccccCCCHHhEEECCCCCEEEccCCceeecccCCCc------cccccCCCcccChhhhchhhhccccccchh
Confidence 99999999999999999999999999999999998776532211 011236778899988653 3356789
Q ss_pred CcccHHHHHHHHHHh
Q 008643 331 DVSPIIPALEAIWQN 345 (558)
Q Consensus 331 Di~~l~~~l~~l~~~ 345 (558)
|+|++|+.+++++++
T Consensus 211 Dv~slGvi~~el~~g 225 (286)
T cd06638 211 DVWSLGITAIELGDG 225 (286)
T ss_pred hhhhHHHHHHHHhcC
Confidence 999999999999874
No 240
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.83 E-value=9.4e-21 Score=188.03 Aligned_cols=187 Identities=17% Similarity=0.104 Sum_probs=130.4
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||.|++|.||+|..+.+++.||||+........ +....+.+|+..
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--------------------------------~~~~~~~~e~~~ 52 (256)
T cd08220 5 IRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTK--------------------------------DERLAAQNECQV 52 (256)
T ss_pred EEEecccCceEEEEEEEcCCCcEEEEEEEecccccc--------------------------------HHHHHHHHHHHH
Confidence 368999999999999998899999999875431100 000011111111
Q ss_pred HH--HHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC-CCCHH--HHHHHHHHHHHHHHHH
Q 008643 187 TL--EARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA-GIDVG--GFLTVGVSAALRQLLE 261 (558)
Q Consensus 187 ~~--Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~-~~~~~--~~~~~~v~~~L~~Lh~ 261 (558)
.. .|+|+.++.+.+. .....+++|||++|++|.+....... ..+.. ..+..+++.++.++|+
T Consensus 53 l~~~~~~~i~~~~~~~~-------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~ 119 (256)
T cd08220 53 LKLLSHPNIIEYYENFL-------------EDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHT 119 (256)
T ss_pred HhhCCCCchhheeeeEe-------------cCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 00 1333333332222 23456999999999999876543222 23333 3456789999999999
Q ss_pred CCceecCCCCCCEEEecCC-CeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHH
Q 008643 262 FGLFHGDPHPGNIFAMRDG-RIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALE 340 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~dg-~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~ 340 (558)
+|++|+|++|+||+++.++ .++++|||++..+...... ....++..|++|+.......+..+|+|++|..++
T Consensus 120 ~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ 192 (256)
T cd08220 120 KLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKA-------YTVVGTPCYISPELCEGKPYNQKSDIWALGCVLY 192 (256)
T ss_pred CCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCccc-------cccccCCcccCchhccCCCCCcccchHHHHHHHH
Confidence 9999999999999998654 5799999999877653321 1123567889999988887888999999999999
Q ss_pred HHHHh
Q 008643 341 AIWQN 345 (558)
Q Consensus 341 ~l~~~ 345 (558)
+++++
T Consensus 193 ~l~~~ 197 (256)
T cd08220 193 ELASL 197 (256)
T ss_pred HHHhC
Confidence 99974
No 241
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.83 E-value=3.5e-21 Score=220.48 Aligned_cols=191 Identities=15% Similarity=0.102 Sum_probs=131.1
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||.|+||.||+|+.+.+++.||+|++....... .....+..|+
T Consensus 18 l~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e--------------------------------~~~~~~~~EI-- 63 (1021)
T PTZ00266 18 IKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKE--------------------------------REKSQLVIEV-- 63 (1021)
T ss_pred EEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCH--------------------------------HHHHHHHHHH--
Confidence 478999999999999999899999999876432110 0001112222
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeee-cCCCceEEEEeeeCCCCCCCHHHHh--c-CCCCHH--HHHHHHHHHHHHHHH
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYK-RLSGSRVLVMEWIDGIRCTDPQAIK--G-AGIDVG--GFLTVGVSAALRQLL 260 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~-~~~~~~vLvmE~i~G~~L~d~~~~~--~-~~~~~~--~~~~~~v~~~L~~Lh 260 (558)
. +...+.+...+.+...+. ......+|||||++|++|.+..... . ..++.. ..+..|++.+|.|||
T Consensus 64 ----~----IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLH 135 (1021)
T PTZ00266 64 ----N----VMRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCH 135 (1021)
T ss_pred ----H----HHHHcCCCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1 222233433343333332 2234568999999999998764321 1 123433 346789999999999
Q ss_pred HC-------CceecCCCCCCEEEecC-----------------CCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHH
Q 008643 261 EF-------GLFHGDPHPGNIFAMRD-----------------GRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEM 316 (558)
Q Consensus 261 ~~-------Gi~H~DlhPgNIlv~~d-----------------g~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~ 316 (558)
.. +|+|+||||.|||++.+ +.++|+|||++..+..... .....+++.|+
T Consensus 136 s~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~-------~~s~vGTp~Ym 208 (1021)
T PTZ00266 136 NLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESM-------AHSCVGTPYYW 208 (1021)
T ss_pred hcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCcccccccccc-------ccccCCCcccc
Confidence 85 49999999999999642 3489999999987654321 12235788999
Q ss_pred HHHHHHc--CCCCCCCCcccHHHHHHHHHHhh
Q 008643 317 ANDFTRL--GFLAKGTDVSPIIPALEAIWQNS 346 (558)
Q Consensus 317 a~~~~~~--g~~~~~~Di~~l~~~l~~l~~~~ 346 (558)
+|+++.. ..+++.+|+|+||+++++++++.
T Consensus 209 APEvL~ge~~~~s~KSDVWSLG~ILYELLTGk 240 (1021)
T PTZ00266 209 SPELLLHETKSYDDKSDMWALGCIIYELCSGK 240 (1021)
T ss_pred CHHHHhccCCCCCchhHHHHHHHHHHHHHHCC
Confidence 9998853 44678899999999999999843
No 242
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.83 E-value=2.4e-20 Score=197.09 Aligned_cols=236 Identities=20% Similarity=0.192 Sum_probs=171.5
Q ss_pred eeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHHH
Q 008643 109 TIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYTL 188 (558)
Q Consensus 109 pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~~ 188 (558)
.+|-|.||.||+|..+.++-..|-|++.-.-.+.+.. ++-|+ .++.|.|
T Consensus 39 ELGDGAFGKVyKA~nket~~lAAaKvIetkseEELED--------------------------ylVEI--eILa~Cd--- 87 (1187)
T KOG0579|consen 39 ELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELED--------------------------YLVEI--EILAECD--- 87 (1187)
T ss_pred hhcCccchhhhhhhcccchhhhhhhhhcccchhHHhh--------------------------hhhhh--hhhhcCC---
Confidence 4799999999999998888888889875433222111 11011 1223333
Q ss_pred HHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC--CCCHHHHHHHHHHHHHHHHHHCCcee
Q 008643 189 EARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA--GIDVGGFLTVGVSAALRQLLEFGLFH 266 (558)
Q Consensus 189 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~--~~~~~~~~~~~v~~~L~~Lh~~Gi~H 266 (558)
|+++++++..|..++.+ ++..|||.||-++.+.---.. ..+..+.++.+++.+|.|||+.+|+|
T Consensus 88 -HP~ivkLl~ayy~enkL-------------wiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIH 153 (1187)
T KOG0579|consen 88 -HPVIVKLLSAYYFENKL-------------WILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIH 153 (1187)
T ss_pred -ChHHHHHHHHHhccCce-------------EEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhh
Confidence 89999999988776655 999999999988765322222 34556778999999999999999999
Q ss_pred cCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-----CCCCCCCCcccHHHHHHH
Q 008643 267 GDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-----GFLAKGTDVSPIIPALEA 341 (558)
Q Consensus 267 ~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-----g~~~~~~Di~~l~~~l~~ 341 (558)
||+|.||||++-||.+++.|||.+......... . ..+-|++.+|||+++.. ..++..+|+|++|.+|-+
T Consensus 154 RDLKAGNiL~TldGdirLADFGVSAKn~~t~qk--R----DsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIE 227 (1187)
T KOG0579|consen 154 RDLKAGNILLTLDGDIRLADFGVSAKNKSTRQK--R----DSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIE 227 (1187)
T ss_pred hhccccceEEEecCcEeeecccccccchhHHhh--h----ccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHH
Confidence 999999999999999999999998766543211 1 12347999999988754 345567899999999988
Q ss_pred HHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCC--chhHHHHHHHHHHHHhhhhhcCCCCChhH
Q 008643 342 IWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRI--PERFSLVIRSLLTQEGICFTLKPDFKFLE 403 (558)
Q Consensus 342 l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l--P~~~~~~~rsl~~legi~~~LdP~~~~~~ 403 (558)
|... ..|-.+.|. +.-+.++....|..+ |+.++.-++.++.. |+.-||+-+..+
T Consensus 228 MAqi--EPPHhelnp---MRVllKiaKSePPTLlqPS~Ws~~F~DfLk~---cL~Knp~~Rp~a 283 (1187)
T KOG0579|consen 228 MAQI--EPPHHELNP---MRVLLKIAKSEPPTLLQPSHWSRSFSDFLKR---CLVKNPRNRPPA 283 (1187)
T ss_pred Hhcc--CCCccccch---HHHHHHHhhcCCCcccCcchhhhHHHHHHHH---HHhcCCccCCCH
Confidence 8752 233334443 344566666777654 88888888888876 888999877544
No 243
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.83 E-value=5.4e-21 Score=195.61 Aligned_cols=189 Identities=17% Similarity=0.147 Sum_probs=125.1
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||.|++|.||+|+.+.+|+.||+|..+......... .+.+|+
T Consensus 11 ~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~---------------------------------~~~~E~-- 55 (301)
T cd07873 11 LDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPC---------------------------------TAIREV-- 55 (301)
T ss_pred eeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchh---------------------------------HHHHHH--
Confidence 478999999999999998899999999876432211000 001111
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCH--HHHHHHHHHHHHHHHHHCCc
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDV--GGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~--~~~~~~~v~~~L~~Lh~~Gi 264 (558)
. ....+.+.+-+.+..++. .....+++|||++| ++.+.........+. ...+..+++.+|.+||+.|+
T Consensus 56 ----~----~l~~l~h~nI~~~~~~~~-~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i 125 (301)
T cd07873 56 ----S----LLKDLKHANIVTLHDIIH-TEKSLTLVFEYLDK-DLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKV 125 (301)
T ss_pred ----H----HHHhcCCCCcceEEEEEe-cCCeEEEEEecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 1 111222222222222222 23456899999985 554432222222333 34567899999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcccHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLG-FLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g-~~~~~~Di~~l~~~l~~l~ 343 (558)
+|+|+||+||+++.++.++++|||++.......... ....++..+++|+..... ..+..+|+|++|..+++++
T Consensus 126 ~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~ 199 (301)
T cd07873 126 LHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY------SNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMS 199 (301)
T ss_pred eCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcc------cccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHH
Confidence 999999999999999999999999987654322110 011246678888887643 3566789999999999999
Q ss_pred Hhh
Q 008643 344 QNS 346 (558)
Q Consensus 344 ~~~ 346 (558)
++.
T Consensus 200 tg~ 202 (301)
T cd07873 200 TGR 202 (301)
T ss_pred hCC
Confidence 753
No 244
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.83 E-value=6.1e-21 Score=192.17 Aligned_cols=180 Identities=14% Similarity=0.101 Sum_probs=130.8
Q ss_pred eeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHHH
Q 008643 109 TIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYTL 188 (558)
Q Consensus 109 pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~~ 188 (558)
.+|.|+||+||+++.+.+|..+|+|+..+...... |+.
T Consensus 23 ~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~---------------------------------------e~~--- 60 (267)
T PHA03390 23 KLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI---------------------------------------EPM--- 60 (267)
T ss_pred eecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh---------------------------------------hHH---
Confidence 36999999999999989999999999764311100 000
Q ss_pred HHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHCCceec
Q 008643 189 EARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLEFGLFHG 267 (558)
Q Consensus 189 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~~Gi~H~ 267 (558)
...+.. .+.+.+.+...+.. ....+++|||++|++|.+...... ...+....+..|++.++.++|+.|++|+
T Consensus 61 ----~~~~~~--~h~~iv~~~~~~~~-~~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~ 133 (267)
T PHA03390 61 ----VHQLMK--DNPNFIKLYYSVTT-LKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHN 133 (267)
T ss_pred ----HHHHhh--cCCCEEEEEEEEec-CCeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeC
Confidence 000000 12222233333322 346799999999999977643322 1233334577899999999999999999
Q ss_pred CCCCCCEEEecCC-CeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHhh
Q 008643 268 DPHPGNIFAMRDG-RIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNS 346 (558)
Q Consensus 268 DlhPgNIlv~~dg-~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~~ 346 (558)
|+||+||+++.++ +++++|||++........ ..++..+++|+....+..++.+|+|++|..+++++.+.
T Consensus 134 dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~----------~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~ 203 (267)
T PHA03390 134 DIKLENVLYDRAKDRIYLCDYGLCKIIGTPSC----------YDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGK 203 (267)
T ss_pred CCCHHHEEEeCCCCeEEEecCccceecCCCcc----------CCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCC
Confidence 9999999999998 999999999887654321 24677899999998888888999999999999999864
Q ss_pred c
Q 008643 347 S 347 (558)
Q Consensus 347 ~ 347 (558)
.
T Consensus 204 ~ 204 (267)
T PHA03390 204 H 204 (267)
T ss_pred C
Confidence 3
No 245
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.83 E-value=4.9e-20 Score=184.63 Aligned_cols=239 Identities=13% Similarity=0.139 Sum_probs=145.9
Q ss_pred ceeeeeeccEEEEEEEcCC---CcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhh
Q 008643 108 QTIAAASLGQVYRATLRET---GEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEEL 184 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~---G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~El 184 (558)
+.||+|+||.||+|.+..+ +..||||+.+...... .++. .
T Consensus 5 ~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~--~~~~------------------------------~----- 47 (273)
T cd05035 5 KILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTY--SEIE------------------------------E----- 47 (273)
T ss_pred cccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCH--HHHH------------------------------H-----
Confidence 6799999999999998543 3789999876432210 0000 0
Q ss_pred cHHHHHHHHHHHHHhcCCCCCeeeceeeecC-----CCceEEEEeeeCCCCCCCHHHHhcC-----CCCH--HHHHHHHH
Q 008643 185 DYTLEARNMEDFLENFKDDPTVKIPRVYKRL-----SGSRVLVMEWIDGIRCTDPQAIKGA-----GIDV--GGFLTVGV 252 (558)
Q Consensus 185 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-----~~~~vLvmE~i~G~~L~d~~~~~~~-----~~~~--~~~~~~~v 252 (558)
+..|.. ....+.+.+.+.+...+.+. ....+++|||+++++|.+....... ..+. ...+..++
T Consensus 48 -~~~e~~----~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i 122 (273)
T cd05035 48 -FLSEAA----CMKDFDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDI 122 (273)
T ss_pred -HHHHHH----HHHhCCCCCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHH
Confidence 111111 11222232222222222211 1235899999999998765433211 1232 23467899
Q ss_pred HHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCc
Q 008643 253 SAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDV 332 (558)
Q Consensus 253 ~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di 332 (558)
+.+|.|||+.|++|+|+||+||+++.++.++++|||++..+........ .........+++|+....+..+..+|+
T Consensus 123 ~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~----~~~~~~~~~~~~pe~~~~~~~~~~~Dv 198 (273)
T cd05035 123 ALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQ----GRIAKMPVKWIAIESLADRVYTSKSDV 198 (273)
T ss_pred HHHHHHHHhCCeeccccchheEEECCCCeEEECCccceeeccccccccc----cccccCCccccCHhhcccCCCCcccch
Confidence 9999999999999999999999999999999999999887644321100 011223456889998887888899999
Q ss_pred ccHHHHHHHHHH-hhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 333 SPIIPALEAIWQ-NSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 333 ~~l~~~l~~l~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
|++|+.+++++. +.. ++...+-.++.+. +........|..+..-+..++.. |+..||+-+
T Consensus 199 ~SlG~il~el~~~g~~--p~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~---~l~~~p~~R 259 (273)
T cd05035 199 WAFGVTMWEIATRGQT--PYPGVENHEIYDY---LRHGNRLKQPEDCLDELYDLMYS---CWRADPKDR 259 (273)
T ss_pred HHHHHHHHHHHhCCCC--CCCCCCHHHHHHH---HHcCCCCCCCcCCCHHHHHHHHH---HcCCChhhC
Confidence 999999999986 221 2223332222222 22233344454444444444433 566666544
No 246
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.83 E-value=7.3e-21 Score=190.00 Aligned_cols=184 Identities=15% Similarity=0.166 Sum_probs=129.8
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||+|++|.||+|.. .+|+.||+|..+...... . ++.
T Consensus 12 ~~ig~G~~g~v~~~~~-~~~~~~a~K~~~~~~~~~---------------------------~--------------~~~ 49 (260)
T cd05067 12 KKLGAGQFGEVWMGYY-NGHTKVAIKSLKQGSMSP---------------------------E--------------AFL 49 (260)
T ss_pred eeeccCccceEEeeec-CCCceEEEEEecCCCCcH---------------------------H--------------HHH
Confidence 6899999999999998 688999999876542210 0 011
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHH--HHHHHHHHHHHHHHHHCCc
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVG--GFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~--~~~~~~v~~~L~~Lh~~Gi 264 (558)
.|.. ....+.+.+.+.+...+ .....+++|||++|++|.+...... ...+.. ..+..+++.++.+||..|+
T Consensus 50 ~E~~----~l~~l~h~~i~~~~~~~--~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i 123 (260)
T cd05067 50 AEAN----LMKQLQHPRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNY 123 (260)
T ss_pred HHHH----HHHhcCCcCeeeEEEEE--ccCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCe
Confidence 1211 11222233333333322 1345699999999999977543222 123333 3456789999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
+|+|+||.||+++.++.++++|||++.......... .....+.+.|++|+....+..++..|+|++|..+++++.
T Consensus 124 ~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~-----~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~ 198 (260)
T cd05067 124 IHRDLRAANILVSETLCCKIADFGLARLIEDNEYTA-----REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 198 (260)
T ss_pred ecccccHHhEEEcCCCCEEEccCcceeecCCCCccc-----ccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHh
Confidence 999999999999999999999999998766322110 011123567899999988888899999999999999986
No 247
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.83 E-value=6.1e-21 Score=189.22 Aligned_cols=188 Identities=19% Similarity=0.179 Sum_probs=128.6
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||.|++|.||+|.+.. |+.||+|+.+....... ... +.
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~---------------------------------~~~------~~ 40 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDL---------------------------------KRK------FL 40 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHH---------------------------------HHH------HH
Confidence 368999999999999954 99999998765422100 001 11
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHHHHHHHHHHHHCCce
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVGVSAALRQLLEFGLF 265 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~v~~~L~~Lh~~Gi~ 265 (558)
+|. +....+.+ +.+.-...+.......+++|||++|++|.+.........+.. ..+..++..++.++|++|++
T Consensus 41 ~e~----~~l~~l~~-~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~ 115 (251)
T cd05041 41 QEA----EILKQYDH-PNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCI 115 (251)
T ss_pred HHH----HHHHhCCC-CCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 111 22223333 333222222233566799999999999877643322233333 33557889999999999999
Q ss_pred ecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 266 HGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 266 H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
|+|++|.||+++.+++++++|||++.......... . .........|++|+....+..+..+|+|++|..++++++
T Consensus 116 h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~-~---~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t 190 (251)
T cd05041 116 HRDLAARNCLVGENNVLKISDFGMSREEEGGIYTV-S---DGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFS 190 (251)
T ss_pred hhhcCcceEEEcCCCcEEEeeccccccccCCccee-c---cccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHh
Confidence 99999999999999999999999987664321100 0 000112345888998888888899999999999999996
No 248
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.83 E-value=1.1e-20 Score=192.41 Aligned_cols=194 Identities=21% Similarity=0.220 Sum_probs=131.1
Q ss_pred HhhhcccCcceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHH
Q 008643 99 EAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGE 178 (558)
Q Consensus 99 ~~~f~~~~~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~ 178 (558)
.+.|+-. +.||.|++|.||+|+...+|+.|++|+......+...
T Consensus 11 ~~~y~i~--~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~---------------------------------- 54 (292)
T cd06644 11 NEVWEII--GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELE---------------------------------- 54 (292)
T ss_pred chhhhhh--heecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHH----------------------------------
Confidence 3444433 5799999999999999888999999997654221100
Q ss_pred hhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCH--HHHHHHHHHHHH
Q 008643 179 KLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDV--GGFLTVGVSAAL 256 (558)
Q Consensus 179 ~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~--~~~~~~~v~~~L 256 (558)
. +..|... ...+.+.+.+.+...+ ...+..+++|||++|+.+...........+. ...+..|++.++
T Consensus 55 ~------~~~e~~~----l~~l~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l 123 (292)
T cd06644 55 D------YMVEIEI----LATCNHPYIVKLLGAF-YWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEAL 123 (292)
T ss_pred H------HHHHHHH----HHhCCCCcEeeeEEEE-EeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHH
Confidence 0 1111121 1222333323222222 2355679999999999886543322233333 345778899999
Q ss_pred HHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-----CCCCCCCC
Q 008643 257 RQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-----GFLAKGTD 331 (558)
Q Consensus 257 ~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-----g~~~~~~D 331 (558)
.+||+.|++|+|+||.||+++.+|+++|+|||++.......... ....++..|++|+++.. ...+..+|
T Consensus 124 ~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~D 197 (292)
T cd06644 124 QYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRR------DSFIGTPYWMAPEVVMCETMKDTPYDYKAD 197 (292)
T ss_pred HHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecccccccc------ceecCCccccCceeeccccccCCCCCchhh
Confidence 99999999999999999999999999999999887543321110 11235677888887742 33456789
Q ss_pred cccHHHHHHHHHHh
Q 008643 332 VSPIIPALEAIWQN 345 (558)
Q Consensus 332 i~~l~~~l~~l~~~ 345 (558)
+|++|+.+++++.+
T Consensus 198 v~slG~il~el~~g 211 (292)
T cd06644 198 IWSLGITLIEMAQI 211 (292)
T ss_pred hHhHHHHHHHHhcC
Confidence 99999999999874
No 249
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.83 E-value=1.3e-20 Score=191.62 Aligned_cols=187 Identities=22% Similarity=0.222 Sum_probs=131.8
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||+|++|.||+|..+.+|+.|++|+.+-..... . +.+.+|+
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~--~--------------------------------~~~~~e~--- 67 (285)
T cd06648 25 VKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQR--R--------------------------------ELLFNEV--- 67 (285)
T ss_pred eEeccCCCeEEEEEEECCCCCEEEEEEEeccchhH--H--------------------------------HHHHHHH---
Confidence 69999999999999998899999999764221100 0 0011111
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHCCceec
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGLFHG 267 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi~H~ 267 (558)
. ....+.+.+.+.+.. +.......+++|||++|++|.+.........+....+..+++.++.++|++|++|+
T Consensus 68 ---~----~l~~~~h~~vv~~~~-~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~ 139 (285)
T cd06648 68 ---V----IMRDYQHPNIVEMYS-SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQGVIHR 139 (285)
T ss_pred ---H----HHHHcCCCChheEEE-EEEcCCeEEEEEeccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 1 111222222222222 22335667999999999999876433222223334577899999999999999999
Q ss_pred CCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHh
Q 008643 268 DPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 268 DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~ 345 (558)
|++|.||+++.+|.++++|||++..+....... ....+++.|++|+....+..+..+|+|++|..+++++.+
T Consensus 140 dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g 211 (285)
T cd06648 140 DIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRR------KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDG 211 (285)
T ss_pred CCChhhEEEcCCCcEEEcccccchhhccCCccc------ccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhC
Confidence 999999999999999999999887654332111 112367789999998877788889999999999999974
No 250
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.83 E-value=1.7e-20 Score=186.27 Aligned_cols=186 Identities=18% Similarity=0.216 Sum_probs=134.5
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCC-----hhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGI-----EPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLL 181 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~-----~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~ 181 (558)
.++||+|++|.||+|..+.+|..||+|.....- .+.+..++.+++.
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~----------------------------- 55 (257)
T cd08225 5 IKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAK----------------------------- 55 (257)
T ss_pred EEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHh-----------------------------
Confidence 468999999999999998899999999865321 1111122211111
Q ss_pred hhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC-CCCH--HHHHHHHHHHHHHH
Q 008643 182 EELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA-GIDV--GGFLTVGVSAALRQ 258 (558)
Q Consensus 182 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~-~~~~--~~~~~~~v~~~L~~ 258 (558)
+ .|+|+.++...+.+.. ..+++|||++|++|.+....... ..+. ...+..+++.++.|
T Consensus 56 --~----~h~~i~~~~~~~~~~~-------------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 116 (257)
T cd08225 56 --M----KHPNIVTFFASFQENG-------------RLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKH 116 (257)
T ss_pred --C----CCCChhhhhheeccCC-------------eEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHH
Confidence 1 1566666665554433 44899999999998775433221 1232 33466789999999
Q ss_pred HHHCCceecCCCCCCEEEecCCC-eEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHH
Q 008643 259 LLEFGLFHGDPHPGNIFAMRDGR-IAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIP 337 (558)
Q Consensus 259 Lh~~Gi~H~DlhPgNIlv~~dg~-l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~ 337 (558)
||..|++|+|++|.||+++.++. ++++|||.+..+...... .....+++.+++|+....+..+..+|+|++|.
T Consensus 117 lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~------~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~ 190 (257)
T cd08225 117 IHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMEL------AYTCVGTPYYLSPEICQNRPYNNKTDIWSLGC 190 (257)
T ss_pred HHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCccc------ccccCCCccccCHHHHcCCCCCchhhHHHHHH
Confidence 99999999999999999998865 699999998877543221 11224677899999988888888999999999
Q ss_pred HHHHHHHhh
Q 008643 338 ALEAIWQNS 346 (558)
Q Consensus 338 ~l~~l~~~~ 346 (558)
.+++++.+.
T Consensus 191 il~~l~~g~ 199 (257)
T cd08225 191 VLYELCTLK 199 (257)
T ss_pred HHHHHHhCC
Confidence 999999743
No 251
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.83 E-value=8.6e-21 Score=198.37 Aligned_cols=206 Identities=19% Similarity=0.223 Sum_probs=138.4
Q ss_pred HHHhCCChHhhhcccC-cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCCh
Q 008643 91 EEELGRPLEAVFSKIS-SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNA 169 (558)
Q Consensus 91 e~elg~~~~~~f~~~~-~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~ 169 (558)
++|++..+.++...|. .+.||.|++|.||+|..+.+|+.||||+.........
T Consensus 3 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-------------------------- 56 (343)
T cd07880 3 RQEVNKTIWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSEL-------------------------- 56 (343)
T ss_pred hhhhhhhhhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchH--------------------------
Confidence 4556666665555554 5789999999999999988999999998754321100
Q ss_pred HHHHHHHHHhhHhhhcHHH--HHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHH
Q 008643 170 ELIVDEFGEKLLEELDYTL--EARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGF 247 (558)
Q Consensus 170 ~~iv~e~~~~l~~Eld~~~--Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~ 247 (558)
....+..|++... +|+|+.++.+.+..+... ......+++|||+ |+++.++........+....
T Consensus 57 ------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-------~~~~~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~ 122 (343)
T cd07880 57 ------FAKRAYRELRLLKHMKHENVIGLLDVFTPDLSL-------DRFHDFYLVMPFM-GTDLGKLMKHEKLSEDRIQF 122 (343)
T ss_pred ------HHHHHHHHHHHHHhcCCCCccceeeeecCCccc-------cccceEEEEEecC-CCCHHHHHhcCCCCHHHHHH
Confidence 0001112221111 245555444443322211 1123458999999 66776543322223334455
Q ss_pred HHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-CCC
Q 008643 248 LTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-GFL 326 (558)
Q Consensus 248 ~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-g~~ 326 (558)
+..|++.++.+||..|++|+|+||+||+++.+|.++++|||++........ ...++..+++|+.... ...
T Consensus 123 i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~---------~~~~~~~y~aPE~~~~~~~~ 193 (343)
T cd07880 123 LVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSEMT---------GYVVTRWYRAPEVILNWMHY 193 (343)
T ss_pred HHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccccCcc---------ccccCCcccCHHHHhCCCCC
Confidence 778999999999999999999999999999999999999999987654221 1134566788888764 346
Q ss_pred CCCCCcccHHHHHHHHHHh
Q 008643 327 AKGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 327 ~~~~Di~~l~~~l~~l~~~ 345 (558)
+...|+|++|..+++++.+
T Consensus 194 ~~~~Di~slG~ll~~l~~g 212 (343)
T cd07880 194 TQTVDIWSVGCIMAEMLTG 212 (343)
T ss_pred CcHHHHHHHHHHHHHHHhC
Confidence 6789999999999999874
No 252
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.83 E-value=6.3e-21 Score=194.36 Aligned_cols=189 Identities=19% Similarity=0.190 Sum_probs=129.5
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||.|++|+||+|..+.+|+.||||..+......... +....+..|++..
T Consensus 6 ~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~-----------------------------~~~~~~~~e~~~l 56 (298)
T cd07841 6 KKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKD-----------------------------GINFTALREIKLL 56 (298)
T ss_pred eeeeeccccEEEEEEECCCCcEEEEEEEeccccccccc-----------------------------hhhHHHHHHHHHH
Confidence 57999999999999998889999999987543210000 0001111121111
Q ss_pred --HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCH--HHHHHHHHHHHHHHHHHCC
Q 008643 188 --LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDV--GGFLTVGVSAALRQLLEFG 263 (558)
Q Consensus 188 --~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~--~~~~~~~v~~~L~~Lh~~G 263 (558)
..|+|+.++.+.+.+ ....++||||+ +++|.++........+. ...+..|++.+|.+||.+|
T Consensus 57 ~~~~h~~i~~~~~~~~~-------------~~~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ 122 (298)
T cd07841 57 QELKHPNIIGLLDVFGH-------------KSNINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNW 122 (298)
T ss_pred hhcCCCCChhhhheeec-------------CCEEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 114555555554443 33458999999 77876654322212333 3446789999999999999
Q ss_pred ceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-CCCCCCCCcccHHHHHHHH
Q 008643 264 LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-GFLAKGTDVSPIIPALEAI 342 (558)
Q Consensus 264 i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-g~~~~~~Di~~l~~~l~~l 342 (558)
++|+|++|+||+++.+|.++|+|||++..+....... ....++..|++|+.... ...+..+|+|++|+.++++
T Consensus 123 i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~ 196 (298)
T cd07841 123 ILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKM------THQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAEL 196 (298)
T ss_pred eeecCCChhhEEEcCCCCEEEccceeeeeccCCCccc------cccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998775432110 00123556788887753 4567789999999999999
Q ss_pred HHh
Q 008643 343 WQN 345 (558)
Q Consensus 343 ~~~ 345 (558)
+.+
T Consensus 197 ~~g 199 (298)
T cd07841 197 LLR 199 (298)
T ss_pred HcC
Confidence 975
No 253
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.83 E-value=5.7e-21 Score=191.73 Aligned_cols=191 Identities=17% Similarity=0.188 Sum_probs=130.1
Q ss_pred cceeeeeeccEEEEEEEcCCCc---EEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhh
Q 008643 107 SQTIAAASLGQVYRATLRETGE---DVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEE 183 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~---~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~E 183 (558)
.+.||+|+||.||+|+++.+|. .||+|..++....... ..
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~---------------------------------~~---- 51 (267)
T cd05066 9 EKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQR---------------------------------RD---- 51 (267)
T ss_pred eeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHH---------------------------------HH----
Confidence 4689999999999999865544 7999987654321100 01
Q ss_pred hcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHHHHHHHHHHHH
Q 008643 184 LDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVGVSAALRQLLE 261 (558)
Q Consensus 184 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~v~~~L~~Lh~ 261 (558)
+..|.. ....+.+.+.+.+...+. .....+++|||++|++|.+.........+.. ..+..+++.++.+||+
T Consensus 52 --~~~e~~----~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~ 124 (267)
T cd05066 52 --FLSEAS----IMGQFDHPNIIHLEGVVT-KSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSD 124 (267)
T ss_pred --HHHHHH----HHHhCCCCCcceEEEEEe-cCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 111111 122233333333333332 2455689999999999987654332223333 3466789999999999
Q ss_pred CCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHH
Q 008643 262 FGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEA 341 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~ 341 (558)
.|++|+|+||+||+++.++.++++|||++..+......... ......+..+++|+....+..+..+|+|++|..+++
T Consensus 125 ~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~---~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~e 201 (267)
T cd05066 125 MGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYT---TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWE 201 (267)
T ss_pred CCEeehhhchhcEEECCCCeEEeCCCCcccccccccceeee---cCCCccceeecCHhHhccCccCchhhhHHHHHHHHH
Confidence 99999999999999999999999999999876543211000 000112346789999988888899999999999999
Q ss_pred HHH
Q 008643 342 IWQ 344 (558)
Q Consensus 342 l~~ 344 (558)
++.
T Consensus 202 ll~ 204 (267)
T cd05066 202 VMS 204 (267)
T ss_pred Hhc
Confidence 875
No 254
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.83 E-value=2e-20 Score=192.86 Aligned_cols=245 Identities=21% Similarity=0.266 Sum_probs=152.2
Q ss_pred hCCChHhhhcccCcceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHH
Q 008643 94 LGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIV 173 (558)
Q Consensus 94 lg~~~~~~f~~~~~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv 173 (558)
++..++++|..+ +.||.|++|.||+|+...+|+.|++|+.......... .
T Consensus 15 ~~~~~~~~~~~~--~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~-~--------------------------- 64 (313)
T cd06633 15 YKDDPEEIFVGL--HEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNE-K--------------------------- 64 (313)
T ss_pred ccCCHHHHhhcc--eeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchH-H---------------------------
Confidence 456677777655 5699999999999999889999999987543111000 0
Q ss_pred HHHHHhhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHH
Q 008643 174 DEFGEKLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVG 251 (558)
Q Consensus 174 ~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~ 251 (558)
...+..| .. ....+.+.+.+.+..++.+ ....+++|||+.| ++.+........++.. ..+..+
T Consensus 65 ---~~~~~~E------~~----~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~q 129 (313)
T cd06633 65 ---WQDIIKE------VK----FLQQLKHPNTIEYKGCYLK-EHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHG 129 (313)
T ss_pred ---HHHHHHH------HH----HHHhCCCCCCccEEEEEEe-CCEEEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHH
Confidence 0011111 11 2222333333333333332 3556899999976 4444332222233333 336678
Q ss_pred HHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHH---cCCCCC
Q 008643 252 VSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTR---LGFLAK 328 (558)
Q Consensus 252 v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~---~g~~~~ 328 (558)
++.++.|||+.|++|+|++|+||+++.+|.++++|||++....... ...++..|++|+.+. .+..+.
T Consensus 130 i~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~----------~~~~~~~y~aPE~~~~~~~~~~~~ 199 (313)
T cd06633 130 ALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPAN----------SFVGTPYWMAPEVILAMDEGQYDG 199 (313)
T ss_pred HHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCCCC----------CccccccccChhhccccCCCCCCc
Confidence 9999999999999999999999999999999999999986543321 123566788999874 356777
Q ss_pred CCCcccHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCC-chhHHHHHHHHHHHHhhhhhcCCCCCh
Q 008643 329 GTDVSPIIPALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRI-PERFSLVIRSLLTQEGICFTLKPDFKF 401 (558)
Q Consensus 329 ~~Di~~l~~~l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l-P~~~~~~~rsl~~legi~~~LdP~~~~ 401 (558)
.+|+|++|..+++++.+.. ++...+. ...+..+........ .+.+..-++.++.. |+..+|+-++
T Consensus 200 ~sDv~slGvil~el~~g~~--p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~li~~---~l~~~P~~Rp 265 (313)
T cd06633 200 KVDVWSLGITCIELAERKP--PLFNMNA---MSALYHIAQNDSPTLQSNEWTDSFRGFVDY---CLQKIPQERP 265 (313)
T ss_pred hhhHHHHHHHHHHHHhCCC--CCCCCCh---HHHHHHHHhcCCCCCCccccCHHHHHHHHH---HccCChhhCc
Confidence 8999999999999987432 2222221 222233332222221 22233345555554 6667776554
No 255
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.83 E-value=1.4e-20 Score=196.97 Aligned_cols=191 Identities=17% Similarity=0.165 Sum_probs=127.8
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.++||+|++|.||+|....+|+.||||+........... +.+.+|+..
T Consensus 22 ~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~--------------------------------~~~~~Ei~~ 69 (345)
T cd07877 22 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--------------------------------KRTYRELRL 69 (345)
T ss_pred EEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHH--------------------------------HHHHHHHHH
Confidence 478999999999999998899999999876532111000 011112111
Q ss_pred HH--HHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHCCc
Q 008643 187 TL--EARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 187 ~~--Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi 264 (558)
.. .|+|+.++.+.+..... .......+++++++ |+++.+.........+....+..|++.|+.|||+.|+
T Consensus 70 l~~l~h~~iv~~~~~~~~~~~-------~~~~~~~~lv~~~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i 141 (345)
T cd07877 70 LKHMKHENVIGLLDVFTPARS-------LEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 141 (345)
T ss_pred HHHcCCCcccceeeeeeeccc-------ccccccEEEEehhc-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 10 24444444333221110 11123457888887 6666554332222333445577899999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-CCCCCCCCcccHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-GFLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-g~~~~~~Di~~l~~~l~~l~ 343 (558)
+|+|+||+||+++.+|.++++|||++........ ...++..+++|+.... ...+..+|+|++|+.+++++
T Consensus 142 vH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~~~---------~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~ 212 (345)
T cd07877 142 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 212 (345)
T ss_pred eecCCChHHEEEcCCCCEEEeccccccccccccc---------ccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHH
Confidence 9999999999999999999999999876543221 1234566888887754 45677899999999999998
Q ss_pred Hhh
Q 008643 344 QNS 346 (558)
Q Consensus 344 ~~~ 346 (558)
.+.
T Consensus 213 ~g~ 215 (345)
T cd07877 213 TGR 215 (345)
T ss_pred hCC
Confidence 743
No 256
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.83 E-value=1.2e-20 Score=189.43 Aligned_cols=189 Identities=17% Similarity=0.123 Sum_probs=129.5
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
...||+|++|.||+|+++.++..||+|........... . +
T Consensus 13 ~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~----------------------------------~------~ 52 (268)
T cd06624 13 RVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQ----------------------------------P------L 52 (268)
T ss_pred eEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHH----------------------------------H------H
Confidence 46899999999999999888999999987654221100 0 1
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCC--CH--HHHHHHHHHHHHHHHHHC
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGI--DV--GGFLTVGVSAALRQLLEF 262 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~--~~--~~~~~~~v~~~L~~Lh~~ 262 (558)
.+|...+ ..+.+.+.+.+...+ ......+++|||++|++|.+......... +. ...+..|++.++.+||..
T Consensus 53 ~~e~~~l----~~l~h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~ 127 (268)
T cd06624 53 HEEIALH----SYLKHRNIVQYLGSD-SENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN 127 (268)
T ss_pred HHHHHHH----HhcCCCCeeeeeeee-ccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC
Confidence 1111111 122232222222211 22345689999999999987654322222 22 234667999999999999
Q ss_pred CceecCCCCCCEEEec-CCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCC--CCCCCCcccHHHHH
Q 008643 263 GLFHGDPHPGNIFAMR-DGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGF--LAKGTDVSPIIPAL 339 (558)
Q Consensus 263 Gi~H~DlhPgNIlv~~-dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~--~~~~~Di~~l~~~l 339 (558)
|++|+|+||.||+++. ++.++++|||++..+...... .....++..|++|+.+..+. .+..+|+|++|..+
T Consensus 128 ~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl 201 (268)
T cd06624 128 QIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPC------TETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTI 201 (268)
T ss_pred CEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCc------cccCCCCccccChhhhccccccCCchhhhHHHHHHH
Confidence 9999999999999976 679999999998766432211 01124677889999886554 56789999999999
Q ss_pred HHHHHhh
Q 008643 340 EAIWQNS 346 (558)
Q Consensus 340 ~~l~~~~ 346 (558)
++++.+.
T Consensus 202 ~~l~~g~ 208 (268)
T cd06624 202 VEMATGK 208 (268)
T ss_pred HHHHhCC
Confidence 9999743
No 257
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.83 E-value=8.3e-21 Score=188.78 Aligned_cols=188 Identities=14% Similarity=0.091 Sum_probs=133.1
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCC-hhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGI-EPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~-~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
+.||.|++|+||.++...+|+.|++|...... ...-. .. +
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~---------------------------------~~------~ 46 (256)
T cd08221 6 RVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKER---------------------------------RD------A 46 (256)
T ss_pred eEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHH---------------------------------HH------H
Confidence 68999999999999998999999999764321 11000 01 1
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHH--HHHHHHHHHHHHHHHHCC
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVG--GFLTVGVSAALRQLLEFG 263 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~--~~~~~~v~~~L~~Lh~~G 263 (558)
.+|.. ....+.+.+.+.+...+.+ ....+++|||++|++|.+...... ...+.. ..+..+++.++.+||+.|
T Consensus 47 ~~e~~----~l~~~~h~~i~~~~~~~~~-~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 121 (256)
T cd08221 47 LNEIV----ILSLLQHPNIIAYYNHFMD-DNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG 121 (256)
T ss_pred HHHHH----HHHhCCCCCeeEEEeEEec-CCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 12222 2222334333434333333 566799999999999987654321 123333 346678999999999999
Q ss_pred ceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 008643 264 LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 264 i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~ 343 (558)
++|+|++|+||+++.++.++++|||.+......... .....++..|++|+.......+..+|+|++|..+++++
T Consensus 122 i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~------~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~ 195 (256)
T cd08221 122 ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSM------AETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELL 195 (256)
T ss_pred ccccCCChHhEEEeCCCCEEECcCcceEEccccccc------ccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHH
Confidence 999999999999999999999999998876543311 11223677889999887666777899999999999998
Q ss_pred Hh
Q 008643 344 QN 345 (558)
Q Consensus 344 ~~ 345 (558)
.+
T Consensus 196 ~g 197 (256)
T cd08221 196 TL 197 (256)
T ss_pred HC
Confidence 74
No 258
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.83 E-value=1.6e-20 Score=186.81 Aligned_cols=189 Identities=19% Similarity=0.186 Sum_probs=132.2
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCC-ChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhc
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPG-IEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELD 185 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~-~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld 185 (558)
.+.||+|++|.||.++.+.+|+.||+|..... ...... ..+.+|
T Consensus 5 ~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~---------------------------------~~~~~e-- 49 (256)
T cd08218 5 VKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKER---------------------------------EESRKE-- 49 (256)
T ss_pred EEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHH---------------------------------HHHHHH--
Confidence 36899999999999999889999999986421 100000 011111
Q ss_pred HHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHH--HHHHHHHHHHHHHHHHC
Q 008643 186 YTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVG--GFLTVGVSAALRQLLEF 262 (558)
Q Consensus 186 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~--~~~~~~v~~~L~~Lh~~ 262 (558)
. +....+.+...+.+... ....+..+++|||++|++|.+...... ...+.. ..+..+++.++.++|+.
T Consensus 50 ----~----~~l~~l~~~~i~~~~~~-~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 120 (256)
T cd08218 50 ----V----AVLSNMKHPNIVQYQES-FEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR 120 (256)
T ss_pred ----H----HHHHhCCCCCeeeeEee-ecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 1 12222333222222222 233456799999999999876543322 123333 34678899999999999
Q ss_pred CceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHH
Q 008643 263 GLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAI 342 (558)
Q Consensus 263 Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l 342 (558)
|++|+|++|.||+++.++.++++|||++..+....... ....++..+++|+....+..+..+|+|++|..++++
T Consensus 121 ~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l 194 (256)
T cd08218 121 KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELA------RTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEM 194 (256)
T ss_pred CEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhh------hhccCCccccCHHHhCCCCCCCccchhHHHHHHHHH
Confidence 99999999999999999999999999998775532211 122356778999998888888889999999999999
Q ss_pred HHh
Q 008643 343 WQN 345 (558)
Q Consensus 343 ~~~ 345 (558)
+.+
T Consensus 195 ~~g 197 (256)
T cd08218 195 CTL 197 (256)
T ss_pred HcC
Confidence 974
No 259
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.83 E-value=1.1e-20 Score=191.69 Aligned_cols=187 Identities=24% Similarity=0.293 Sum_probs=135.0
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.+|.|++|+||+|.+..++..|++|+.+..... ...+..|+
T Consensus 25 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-----------------------------------~~~~~~e~--- 66 (286)
T cd06614 25 EKIGEGASGEVYKATDRATGKEVAIKKMRLRKQN-----------------------------------KELIINEI--- 66 (286)
T ss_pred HhccCCCCeEEEEEEEccCCcEEEEEEEecCchh-----------------------------------HHHHHHHH---
Confidence 6899999999999999878999999998754320 00111111
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHHHHHHHHHHHHCCce
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVGVSAALRQLLEFGLF 265 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~v~~~L~~Lh~~Gi~ 265 (558)
. ....+.+.+.+.+...+. .....+++|||++|++|.++........+.. ..+..+++.++.+||..|++
T Consensus 67 ---~----~l~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~ 138 (286)
T cd06614 67 ---L----IMKDCKHPNIVDYYDSYL-VGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVI 138 (286)
T ss_pred ---H----HHHHCCCCCeeEEEEEEE-ECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 1 112222333333333322 3467799999999999988755443233333 34678899999999999999
Q ss_pred ecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHh
Q 008643 266 HGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 266 H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~ 345 (558)
|+|++|+||+++.+|.++++|||.+..+...... .....++..|++|+....+..+..+|+|++|..+++++++
T Consensus 139 H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g 212 (286)
T cd06614 139 HRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSK------RNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEG 212 (286)
T ss_pred eCCCChhhEEEcCCCCEEECccchhhhhccchhh------hccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhC
Confidence 9999999999999999999999998766543221 1122356778899988877778899999999999999975
Q ss_pred h
Q 008643 346 S 346 (558)
Q Consensus 346 ~ 346 (558)
.
T Consensus 213 ~ 213 (286)
T cd06614 213 E 213 (286)
T ss_pred C
Confidence 3
No 260
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.83 E-value=6.2e-21 Score=195.84 Aligned_cols=190 Identities=14% Similarity=0.114 Sum_probs=127.7
Q ss_pred cceeeeeeccEEEEEEEcC-------CCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHh
Q 008643 107 SQTIAAASLGQVYRATLRE-------TGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEK 179 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~-------~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~ 179 (558)
.+.||+|+||.||+|+... ++..||+|+.++.....-.. .
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~---------------------------------~ 69 (307)
T cd05098 23 GKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLS---------------------------------D 69 (307)
T ss_pred eeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHH---------------------------------H
Confidence 4789999999999998632 33579999987653211000 0
Q ss_pred hHhhhcHHHHHHHHHHHHHhc-CCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC---------------CCC
Q 008643 180 LLEELDYTLEARNMEDFLENF-KDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA---------------GID 243 (558)
Q Consensus 180 l~~Eld~~~Ea~n~~~~~~~~-~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~---------------~~~ 243 (558)
+..| ... ...+ .+...+.+...+. .....+++|||++|++|.++...... ..+
T Consensus 70 ~~~e------~~~----l~~l~~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~ 138 (307)
T cd05098 70 LISE------MEM----MKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLS 138 (307)
T ss_pred HHHH------HHH----HHHhcCCCCEeeEEEEEe-cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCC
Confidence 1111 111 1112 1222223333322 24567999999999999876543211 122
Q ss_pred H--HHHHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHH
Q 008643 244 V--GGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFT 321 (558)
Q Consensus 244 ~--~~~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~ 321 (558)
. ...+..+++.+|.|||++|++|+|+||+||+++.++.++++|||.+..+........ .........|++|+..
T Consensus 139 ~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~----~~~~~~~~~y~aPE~~ 214 (307)
T cd05098 139 FKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK----TTNGRLPVKWMAPEAL 214 (307)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCCCcEEECCCcccccccccchhhc----cccCCCccceeChHHh
Confidence 2 234678899999999999999999999999999999999999999876643211100 0001123568999988
Q ss_pred HcCCCCCCCCcccHHHHHHHHHH
Q 008643 322 RLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 322 ~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
..+..+..+|+|++|..+++++.
T Consensus 215 ~~~~~~~~~DvwslG~~l~el~~ 237 (307)
T cd05098 215 FDRIYTHQSDVWSFGVLLWEIFT 237 (307)
T ss_pred ccCCCCcHHHHHHHHHHHHHHHc
Confidence 88888889999999999999985
No 261
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.83 E-value=8.6e-21 Score=190.94 Aligned_cols=239 Identities=15% Similarity=0.149 Sum_probs=148.5
Q ss_pred cceeeeeeccEEEEEEEcCC-----CcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhH
Q 008643 107 SQTIAAASLGQVYRATLRET-----GEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLL 181 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~-----G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~ 181 (558)
.+.||+|++|.||+|..+.. +..||+|....+.....
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~-------------------------------------- 52 (277)
T cd05032 11 IRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRE-------------------------------------- 52 (277)
T ss_pred EeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHH--------------------------------------
Confidence 46899999999999998543 37899998754421100
Q ss_pred hhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC---------CCCH--HHHHHH
Q 008643 182 EELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA---------GIDV--GGFLTV 250 (558)
Q Consensus 182 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~---------~~~~--~~~~~~ 250 (558)
...+.+|.. ....+.+...+.+...+. .....+++|||+++++|.+....... ..+. ...+..
T Consensus 53 -~~~~~~e~~----~l~~~~~~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (277)
T cd05032 53 -RIEFLNEAS----VMKEFNCHHVVRLLGVVS-TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAA 126 (277)
T ss_pred -HHHHHHHHH----HHHhCCCCceeEEEEEEc-CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHH
Confidence 001111222 222233333333333222 24567999999999999876432211 1122 233567
Q ss_pred HHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCC
Q 008643 251 GVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGT 330 (558)
Q Consensus 251 ~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~ 330 (558)
+++.++.|||+.|++|+|++|+||+++.+|.++++|||++..+........ .....++..|++|+....+..++.+
T Consensus 127 ~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~ 202 (277)
T cd05032 127 EIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRK----GGKGLLPVRWMAPESLKDGVFTTKS 202 (277)
T ss_pred HHHHHHHHHHhCCccccccChheEEEcCCCCEEECCcccchhhccCccccc----CCCCCccccccCHHHHhcCCCCccc
Confidence 899999999999999999999999999999999999999876643321100 0111235678999999888899999
Q ss_pred CcccHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 331 DVSPIIPALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 331 Di~~l~~~l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
|+|++|..++++++. ...++...+...+...+ ........|..+...++.++.. |+..+|+-+
T Consensus 203 Di~slG~il~el~t~-g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~---~l~~~p~~R 265 (277)
T cd05032 203 DVWSFGVVLWEMATL-AEQPYQGLSNEEVLKFV---IDGGHLDLPENCPDKLLELMRM---CWQYNPKMR 265 (277)
T ss_pred chHHHHHHHHHhhcc-CCCCCccCCHHHHHHHH---hcCCCCCCCCCCCHHHHHHHHH---HcCCChhhC
Confidence 999999999999862 11122222333332222 2222334455444444455443 556666544
No 262
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.83 E-value=1.3e-20 Score=187.24 Aligned_cols=119 Identities=20% Similarity=0.137 Sum_probs=94.6
Q ss_pred CceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHHHHHHHHHHHHCCceecCCCCCCEEEecCC-------CeEEeec
Q 008643 217 GSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDG-------RIAYVDF 287 (558)
Q Consensus 217 ~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg-------~l~liDF 287 (558)
...+++|||++|++|.++........+.. ..+..|++.+|.|||+.|++|+|+||+||+++.++ .++++||
T Consensus 73 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Df 152 (259)
T cd05037 73 DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDP 152 (259)
T ss_pred CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCC
Confidence 45589999999999987654433233433 34567999999999999999999999999999888 7999999
Q ss_pred CcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC--CCCCCCCcccHHHHHHHHHHh
Q 008643 288 GNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLG--FLAKGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 288 Gl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g--~~~~~~Di~~l~~~l~~l~~~ 345 (558)
|++..+.... ...++..|++|+....+ ..+..+|+|++|..+++++..
T Consensus 153 g~a~~~~~~~----------~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~ 202 (259)
T cd05037 153 GIPITVLSRE----------ERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSN 202 (259)
T ss_pred Cccccccccc----------ccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhC
Confidence 9988765411 11245668899988766 678889999999999999874
No 263
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.83 E-value=6.2e-20 Score=182.99 Aligned_cols=236 Identities=16% Similarity=0.136 Sum_probs=148.9
Q ss_pred eeeeeeccEEEEEEEcCCC---cEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhc
Q 008643 109 TIAAASLGQVYRATLRETG---EDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELD 185 (558)
Q Consensus 109 pIg~Gs~GqVy~a~~~~~G---~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld 185 (558)
.||.|++|+||+|+...++ ..||+|+.+........ ..
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~---------------------------------~~------ 42 (257)
T cd05060 2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGK---------------------------------KE------ 42 (257)
T ss_pred ccCccCceeEEEeEeeccCCCcceEEEEecccccchHHH---------------------------------HH------
Confidence 5899999999999875444 78999988754321000 01
Q ss_pred HHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHCCc
Q 008643 186 YTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 186 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~~Gi 264 (558)
+..|.. ....+.+...+.+..++ .....+++|||++|++|.+...... ........+..+++.++.+||..|+
T Consensus 43 ~~~e~~----~l~~l~h~~iv~~~~~~--~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i 116 (257)
T cd05060 43 FLREAS----VMAQLDHPCIVRLIGVC--KGEPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHF 116 (257)
T ss_pred HHHHHH----HHHhcCCCCeeeEEEEE--cCCceEEEEEeCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCe
Confidence 111111 12223333333333332 2445799999999999887643322 1222334577899999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
+|+|+||.||+++.++.++++|||++..+......... .....+...|++|+....+.++..+|+|++|..++++++
T Consensus 117 ~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~ 193 (257)
T cd05060 117 VHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRA---TTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFS 193 (257)
T ss_pred eccCcccceEEEcCCCcEEeccccccceeecCCccccc---ccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHc
Confidence 99999999999999999999999999876543221100 000112346889999988888999999999999999986
Q ss_pred -hhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 345 -NSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 345 -~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
+.. ++...+-.++...+ ....+...|......++.++.. |+..+|+-+
T Consensus 194 ~g~~--p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~li~~---cl~~~p~~R 242 (257)
T cd05060 194 YGAK--PYGEMKGAEVIAML---ESGERLPRPEECPQEIYSIMLS---CWKYRPEDR 242 (257)
T ss_pred CCCC--CcccCCHHHHHHHH---HcCCcCCCCCCCCHHHHHHHHH---HhcCChhhC
Confidence 322 33333333332222 1222334454444445555544 555666544
No 264
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.83 E-value=4.2e-21 Score=192.30 Aligned_cols=187 Identities=18% Similarity=0.145 Sum_probs=129.7
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|++|.||+|+.+.+|+.||+|+.+........ . +
T Consensus 14 ~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~----------------------------------~------~ 53 (267)
T cd06646 14 IQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFS----------------------------------L------I 53 (267)
T ss_pred hheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHH----------------------------------H------H
Confidence 47899999999999999889999999998654221100 0 1
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCC--HHHHHHHHHHHHHHHHHHCCc
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGID--VGGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~--~~~~~~~~v~~~L~~Lh~~Gi 264 (558)
.+|... ...+.+.+.+.+...+ ......+++|||++|++|.+..... ...+ ....+..|++.++.+||+.|+
T Consensus 54 ~~e~~~----l~~~~h~~ii~~~~~~-~~~~~~~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i 127 (267)
T cd06646 54 QQEIFM----VKECKHCNIVAYFGSY-LSREKLWICMEYCGGGSLQDIYHVT-GPLSELQIAYVCRETLQGLAYLHSKGK 127 (267)
T ss_pred HHHHHH----HHhcCCCCeeeeeEEE-EeCCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 111111 1122233222222222 2245668999999999997754322 2233 334567899999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHH---cCCCCCCCCcccHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTR---LGFLAKGTDVSPIIPALEA 341 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~---~g~~~~~~Di~~l~~~l~~ 341 (558)
+|+|++|+||+++.+|.++++|||++..+....... ....++..|++|+... .+..+..+|+|++|..+++
T Consensus 128 ~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~e 201 (267)
T cd06646 128 MHRDIKGANILLTDNGDVKLADFGVAAKITATIAKR------KSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIE 201 (267)
T ss_pred cccCCCHHHEEECCCCCEEECcCccceeeccccccc------CccccCccccCHhHcccccCCCCcchhhHHHHHHHHHH
Confidence 999999999999999999999999998764322110 1123567788999873 3445677999999999999
Q ss_pred HHHh
Q 008643 342 IWQN 345 (558)
Q Consensus 342 l~~~ 345 (558)
++++
T Consensus 202 l~~g 205 (267)
T cd06646 202 LAEL 205 (267)
T ss_pred HHhC
Confidence 9874
No 265
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.83 E-value=7.7e-20 Score=185.32 Aligned_cols=192 Identities=16% Similarity=0.156 Sum_probs=132.8
Q ss_pred ceeeeeeccEEEEEEE----cCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhh
Q 008643 108 QTIAAASLGQVYRATL----RETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEE 183 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~----~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~E 183 (558)
+.||+|+||.||.|+. +.+|..||+|..++........ .
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~---------------------------------~---- 52 (284)
T cd05079 10 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIA---------------------------------D---- 52 (284)
T ss_pred eecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHH---------------------------------H----
Confidence 5799999999999985 3578899999987653221100 1
Q ss_pred hcHHHHHHHHHHHHHhcCCCCCeeeceeeecC-CCceEEEEeeeCCCCCCCHHHHhcCCCCH--HHHHHHHHHHHHHHHH
Q 008643 184 LDYTLEARNMEDFLENFKDDPTVKIPRVYKRL-SGSRVLVMEWIDGIRCTDPQAIKGAGIDV--GGFLTVGVSAALRQLL 260 (558)
Q Consensus 184 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~vLvmE~i~G~~L~d~~~~~~~~~~~--~~~~~~~v~~~L~~Lh 260 (558)
+.+|.. ....+.+.+.+.+...+... ....+++|||++|++|.+.........+. ...+..+++.+|.++|
T Consensus 53 --~~~e~~----~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH 126 (284)
T cd05079 53 --LKKEIE----ILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLG 126 (284)
T ss_pred --HHHHHH----HHHhCCCCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 111111 22223344444444433332 24568999999999998764332222333 3456789999999999
Q ss_pred HCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHH
Q 008643 261 EFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALE 340 (558)
Q Consensus 261 ~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~ 340 (558)
+.|++|+|+||.||+++.+|.++++|||++..+....... .......++..|++|+....+..++.+|+|++|..++
T Consensus 127 ~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~---~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ 203 (284)
T cd05079 127 SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYY---TVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLY 203 (284)
T ss_pred HCCeeecccchheEEEcCCCCEEECCCccccccccCccce---eecCCCCCCccccCHHHhccCCCCccccchhhhhhhh
Confidence 9999999999999999999999999999998765432110 0011123455688999888788888999999999999
Q ss_pred HHHHh
Q 008643 341 AIWQN 345 (558)
Q Consensus 341 ~l~~~ 345 (558)
++++.
T Consensus 204 ellt~ 208 (284)
T cd05079 204 ELLTY 208 (284)
T ss_pred hhhcC
Confidence 99863
No 266
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.83 E-value=8.2e-21 Score=190.62 Aligned_cols=191 Identities=19% Similarity=0.203 Sum_probs=129.0
Q ss_pred cceeeeeeccEEEEEEEcCCCc---EEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhh
Q 008643 107 SQTIAAASLGQVYRATLRETGE---DVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEE 183 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~---~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~E 183 (558)
.+.||+|++|.||+|+++.+|. .||||+........... .+..|
T Consensus 9 ~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~---------------------------------~~~~e 55 (269)
T cd05065 9 EEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRR---------------------------------DFLSE 55 (269)
T ss_pred EeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHH---------------------------------HHHHH
Confidence 4679999999999999976665 59999976542211110 11112
Q ss_pred hcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHHHHHHHHHHHH
Q 008643 184 LDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVGVSAALRQLLE 261 (558)
Q Consensus 184 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~v~~~L~~Lh~ 261 (558)
.. ....+.+.+.+.+...+ ......+++|||++|++|.+.........+.. ..+..+++.++.+||+
T Consensus 56 ------~~----~l~~l~h~ni~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~ 124 (269)
T cd05065 56 ------AS----IMGQFDHPNIIHLEGVV-TKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSE 124 (269)
T ss_pred ------HH----HHHhCCCcCcceEEEEE-CCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 11 11222333323222222 23455689999999999877644332233333 3466789999999999
Q ss_pred CCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhc--CHHHHHHHHHHcCCCCCCCCcccHHHHH
Q 008643 262 FGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNE--DYAEMANDFTRLGFLAKGTDVSPIIPAL 339 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~--d~~~~a~~~~~~g~~~~~~Di~~l~~~l 339 (558)
.|++|+|+||.||+++.++.++++|||.+..+........ ......+ +..|++|+....+..+..+|+|++|..+
T Consensus 125 ~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~---~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l 201 (269)
T cd05065 125 MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPT---YTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVM 201 (269)
T ss_pred CCEeecccChheEEEcCCCcEEECCCccccccccCccccc---cccccCCCcceeecCHhHhccCcccchhhhhhhHHHH
Confidence 9999999999999999999999999999876543221100 0011111 3468899998888888899999999999
Q ss_pred HHHHH
Q 008643 340 EAIWQ 344 (558)
Q Consensus 340 ~~l~~ 344 (558)
++++.
T Consensus 202 ~e~l~ 206 (269)
T cd05065 202 WEVMS 206 (269)
T ss_pred HHHhc
Confidence 99874
No 267
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.83 E-value=4.1e-20 Score=188.90 Aligned_cols=202 Identities=15% Similarity=0.157 Sum_probs=126.5
Q ss_pred cceeeeeeccEEEEEEEcCC---CcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhh
Q 008643 107 SQTIAAASLGQVYRATLRET---GEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEE 183 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~---G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~E 183 (558)
.+.||+|+||.||+|....+ +..+|+|+....-. .+..+...++.+.
T Consensus 17 ~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~-~~~~e~~~~~~~~----------------------------- 66 (294)
T PHA02882 17 DKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENE-TIVMETLVYNNIY----------------------------- 66 (294)
T ss_pred eeEEecCCCceEEEEEEcCCcccccceEEEeccccCC-chhhHHHHHHhhh-----------------------------
Confidence 46899999999999998666 66788887543211 1112221111110
Q ss_pred hcHHHHHHHHHHHHHhcCCCCCeeeceeeecCC------CceEEEEeeeCCCCCCCHHHHh-cCCCCHHHHHHHHHHHHH
Q 008643 184 LDYTLEARNMEDFLENFKDDPTVKIPRVYKRLS------GSRVLVMEWIDGIRCTDPQAIK-GAGIDVGGFLTVGVSAAL 256 (558)
Q Consensus 184 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~------~~~vLvmE~i~G~~L~d~~~~~-~~~~~~~~~~~~~v~~~L 256 (558)
..+.......+.......+|..+.... ...+++||++.+ .+.+..... ..+......+..|++.++
T Consensus 67 ------~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~qi~~~l 139 (294)
T PHA02882 67 ------DIDKIALWKNIHNIDHLGIPKYYGCGSFKRCRMYYRFILLEKLVE-NTKEIFKRIKCKNKKLIKNIMKDMLTTL 139 (294)
T ss_pred ------hHHHHHHHHHhccCCCCCCCcEEEeeeEecCCceEEEEEEehhcc-CHHHHHHhhccCCHHHHHHHHHHHHHHH
Confidence 011111112222222334455543211 123677777643 232221111 112222345778999999
Q ss_pred HHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHH-HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccH
Q 008643 257 RQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQI-LIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPI 335 (558)
Q Consensus 257 ~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~-l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l 335 (558)
.|+|+.|++|||+||+||+++.++.++++|||++..+....... ..........+++.|++|+......++..+|+|++
T Consensus 140 ~~lH~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSl 219 (294)
T PHA02882 140 EYIHEHGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESL 219 (294)
T ss_pred HHHHhCCeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHH
Confidence 99999999999999999999999999999999998764322110 00001122357889999999988888999999999
Q ss_pred HHHHHHHHHh
Q 008643 336 IPALEAIWQN 345 (558)
Q Consensus 336 ~~~l~~l~~~ 345 (558)
|+.+++++++
T Consensus 220 G~~l~el~~g 229 (294)
T PHA02882 220 GYCMLKWAGI 229 (294)
T ss_pred HHHHHHHHhC
Confidence 9999999874
No 268
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.83 E-value=2.1e-20 Score=187.10 Aligned_cols=193 Identities=21% Similarity=0.191 Sum_probs=131.9
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCCh--hhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhh
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIE--PIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEEL 184 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~--~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~El 184 (558)
.++||+|++|.||+|..+.+++.|++|+...... +.+..++.+++.+
T Consensus 11 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~------------------------------- 59 (275)
T cd06608 11 VEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKY------------------------------- 59 (275)
T ss_pred eeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHh-------------------------------
Confidence 3789999999999999988899999999875432 1122222221111
Q ss_pred cHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc---CCCC--HHHHHHHHHHHHHHHH
Q 008643 185 DYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG---AGID--VGGFLTVGVSAALRQL 259 (558)
Q Consensus 185 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~---~~~~--~~~~~~~~v~~~L~~L 259 (558)
.+|+|+.++.+.+..... .......+++|||++|++|.++..... ...+ ....+..|++.++.+|
T Consensus 60 ---~~h~~i~~~~~~~~~~~~-------~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~l 129 (275)
T cd06608 60 ---SNHPNIATFYGAFIKKNP-------PGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYL 129 (275)
T ss_pred ---cCCCChheEEEEEEecCC-------CCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 013444333332221110 011234589999999999987654322 2233 3345778999999999
Q ss_pred HHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC-----CCCCCCCccc
Q 008643 260 LEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLG-----FLAKGTDVSP 334 (558)
Q Consensus 260 h~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g-----~~~~~~Di~~ 334 (558)
|+.|++|+|++|.||+++.+|.++++|||++.......... ....++..|++|+..... .++..+|+|+
T Consensus 130 H~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~s 203 (275)
T cd06608 130 HENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRR------NTFIGTPYWMAPEVIACDEQPDASYDARSDVWS 203 (275)
T ss_pred hcCCcccCCCCHHHEEEccCCeEEECCCccceecccchhhh------cCccccccccCHhHhcccccccCCccccccHHH
Confidence 99999999999999999999999999999987765432211 112357778999987542 2456789999
Q ss_pred HHHHHHHHHHhh
Q 008643 335 IIPALEAIWQNS 346 (558)
Q Consensus 335 l~~~l~~l~~~~ 346 (558)
+|..+++++++.
T Consensus 204 lG~il~~l~~g~ 215 (275)
T cd06608 204 LGITAIELADGK 215 (275)
T ss_pred hHHHHHHHHhCC
Confidence 999999999753
No 269
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.83 E-value=8.4e-21 Score=193.79 Aligned_cols=187 Identities=20% Similarity=0.200 Sum_probs=132.8
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|++|.||+|....+|..||+|+......... ..+.+|+..
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~----------------------------------~~~~~e~~~ 69 (293)
T cd06647 24 FEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKK----------------------------------ELIINEILV 69 (293)
T ss_pred eeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHH----------------------------------HHHHHHHHH
Confidence 4789999999999999878899999998643211100 001111110
Q ss_pred H--HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHCCc
Q 008643 187 T--LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 187 ~--~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi 264 (558)
. ..|+|+.++.+.+.. ....+++|||++|++|.+..............+..+++.++.+||+.|+
T Consensus 70 l~~l~hp~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~gi 136 (293)
T cd06647 70 MRENKHPNIVNYLDSYLV-------------GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 136 (293)
T ss_pred HhhcCCCCeeehhheeee-------------CCcEEEEEecCCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 0 013444444433322 3456999999999999775432222223334567889999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
+|+|+||+||+++.++.++++|||++..+....... ....+.+.|++|+....+..+..+|+|++|..+++++.
T Consensus 137 ~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~------~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~ 210 (293)
T cd06647 137 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR------STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVE 210 (293)
T ss_pred eeccCCHHHEEEcCCCCEEEccCcceeccccccccc------ccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHh
Confidence 999999999999999999999999887665433211 11236677899999888888889999999999999997
Q ss_pred hh
Q 008643 345 NS 346 (558)
Q Consensus 345 ~~ 346 (558)
+.
T Consensus 211 g~ 212 (293)
T cd06647 211 GE 212 (293)
T ss_pred CC
Confidence 43
No 270
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.83 E-value=1.7e-19 Score=182.65 Aligned_cols=124 Identities=18% Similarity=0.102 Sum_probs=98.0
Q ss_pred CceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccC
Q 008643 217 GSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELS 294 (558)
Q Consensus 217 ~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~ 294 (558)
...+++|||+++++|.+.........+.. ..+..|++.++.|+|+.|++|+|+||.||+++.++.++++|||++..+.
T Consensus 81 ~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~ 160 (279)
T cd05111 81 ASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLY 160 (279)
T ss_pred CccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceecc
Confidence 34579999999999987654333333433 3467899999999999999999999999999999999999999998765
Q ss_pred hhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 295 QQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 295 ~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
+...... .....+...|++|+....+.++..+|+|++|..++++++
T Consensus 161 ~~~~~~~----~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t 206 (279)
T cd05111 161 PDDKKYF----YSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMS 206 (279)
T ss_pred CCCcccc----cCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHc
Confidence 4332111 111234567899999988888999999999999999986
No 271
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.83 E-value=5.4e-20 Score=184.60 Aligned_cols=240 Identities=14% Similarity=0.135 Sum_probs=147.7
Q ss_pred ceeeeeeccEEEEEEEcCCCc--EEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhc
Q 008643 108 QTIAAASLGQVYRATLRETGE--DVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELD 185 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~--~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld 185 (558)
+.||+|+||.||+|++..+++ .||||..+......-. . ..
T Consensus 5 ~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~--~------------------------------~~------ 46 (272)
T cd05075 5 KTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSE--M------------------------------ED------ 46 (272)
T ss_pred cccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHH--H------------------------------HH------
Confidence 579999999999999966665 6999987654321100 0 00
Q ss_pred HHHHHHHHHHHHHhcCCCCCeeeceeee-----cCCCceEEEEeeeCCCCCCCHHHHhcC-----CCCHH--HHHHHHHH
Q 008643 186 YTLEARNMEDFLENFKDDPTVKIPRVYK-----RLSGSRVLVMEWIDGIRCTDPQAIKGA-----GIDVG--GFLTVGVS 253 (558)
Q Consensus 186 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~-----~~~~~~vLvmE~i~G~~L~d~~~~~~~-----~~~~~--~~~~~~v~ 253 (558)
+..|...+ ..+.+.+.+.+..... ......+++|||++|++|.+....... .++.. ..+..|++
T Consensus 47 ~~~E~~~l----~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 122 (272)
T cd05075 47 FLSEAVCM----KEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIA 122 (272)
T ss_pred HHHHHHHH----HhCCCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHH
Confidence 11222222 2223333333332221 112346899999999998765432211 12332 34678899
Q ss_pred HHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcc
Q 008643 254 AALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVS 333 (558)
Q Consensus 254 ~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~ 333 (558)
.++.|||++|++|+|+||+||+++.++.++++|||++..+....... .......++.+++|+....+..++.+|+|
T Consensus 123 ~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~----~~~~~~~~~~~~~pe~~~~~~~~~~~Di~ 198 (272)
T cd05075 123 SGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYR----QGRIAKMPVKWIAIESLADRVYTTKSDVW 198 (272)
T ss_pred HHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcccccCccccee----cCCcccCCcccCCHHHccCCCcChHHHHH
Confidence 99999999999999999999999999999999999998765432100 00112345678899998888888999999
Q ss_pred cHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 334 PIIPALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 334 ~l~~~l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
++|..+++++... ..++...+...+...+ .....+..|+.+...++.++.. |+..||+-+
T Consensus 199 slG~il~el~~~g-~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~---~l~~~p~~R 258 (272)
T cd05075 199 SFGVTMWEIATRG-QTPYPGVENSEIYDYL---RQGNRLKQPPDCLDGLYSLMSS---CWLLNPKDR 258 (272)
T ss_pred HHHHHHHHHHcCC-CCCCCCCCHHHHHHHH---HcCCCCCCCCCCCHHHHHHHHH---HcCCCcccC
Confidence 9999999998621 1122223333322222 1222233444444444555544 566666544
No 272
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.83 E-value=4.1e-20 Score=193.23 Aligned_cols=94 Identities=16% Similarity=0.111 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCC
Q 008643 247 FLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFL 326 (558)
Q Consensus 247 ~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~ 326 (558)
.+..+++.++.|||+.|++|+|+||.||+++.++.++++|||++..+....... ......+++.|++|+....+.+
T Consensus 183 ~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~ 258 (343)
T cd05103 183 CYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYV----RKGDARLPLKWMAPETIFDRVY 258 (343)
T ss_pred HHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchh----hcCCCCCCcceECcHHhcCCCC
Confidence 356789999999999999999999999999999999999999988764322110 0011234567889998887778
Q ss_pred CCCCCcccHHHHHHHHHH
Q 008643 327 AKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 327 ~~~~Di~~l~~~l~~l~~ 344 (558)
+..+|+|++|..++++++
T Consensus 259 ~~~~Di~slG~~l~el~~ 276 (343)
T cd05103 259 TIQSDVWSFGVLLWEIFS 276 (343)
T ss_pred CchhhHHHHHHHHHHHHH
Confidence 889999999999999985
No 273
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.83 E-value=5.4e-21 Score=190.30 Aligned_cols=179 Identities=20% Similarity=0.196 Sum_probs=127.4
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|++|.||++.. +|+.||+|+.+..... ..+..|+
T Consensus 11 ~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~~~------------------------------------~~~~~e~-- 50 (254)
T cd05083 11 GEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDVTA------------------------------------QAFLEET-- 50 (254)
T ss_pred eeeeccCCCCceEeccc--CCCceEEEeecCcchH------------------------------------HHHHHHH--
Confidence 47899999999999975 7899999987643211 0111111
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC-CCCHH--HHHHHHHHHHHHHHHHCC
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA-GIDVG--GFLTVGVSAALRQLLEFG 263 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~-~~~~~--~~~~~~v~~~L~~Lh~~G 263 (558)
. ....+.+.+.+.+...+. ....+++|||++|++|.+....... ..+.. ..+..+++.++.++|+.|
T Consensus 51 ----~----~l~~~~~~~i~~~~~~~~--~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ 120 (254)
T cd05083 51 ----A----VMTKLHHKNLVRLLGVIL--HNGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKK 120 (254)
T ss_pred ----H----HHHhCCCCCcCeEEEEEc--CCCcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 1 122233444444443332 2346899999999999876543222 23333 336778999999999999
Q ss_pred ceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 008643 264 LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 264 i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~ 343 (558)
++|+|+||+||+++.+|.++++|||++......... ......|++|+....+..+...|+|++|..+++++
T Consensus 121 ~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~---------~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~ 191 (254)
T cd05083 121 LVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDN---------SKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVF 191 (254)
T ss_pred eeccccCcceEEEcCCCcEEECCCccceeccccCCC---------CCCCceecCHHHhccCCcCchhhHHHHHHHHHHHH
Confidence 999999999999999999999999998764332110 12245688899888888888999999999999998
Q ss_pred H
Q 008643 344 Q 344 (558)
Q Consensus 344 ~ 344 (558)
.
T Consensus 192 ~ 192 (254)
T cd05083 192 S 192 (254)
T ss_pred h
Confidence 5
No 274
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.83 E-value=1.7e-20 Score=187.09 Aligned_cols=193 Identities=20% Similarity=0.220 Sum_probs=133.9
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|++|.||+|+...+|+.|++|+.+..... ..+ ...+.+|+..
T Consensus 5 ~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~------------------------------~~~~~~e~~~ 52 (264)
T cd06626 5 GNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND--PKT------------------------------IKEIADEMKV 52 (264)
T ss_pred eeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc--hHH------------------------------HHHHHHHHHH
Confidence 36899999999999999788999999998654321 000 0111112111
Q ss_pred HH--HHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHCC
Q 008643 187 TL--EARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLEFG 263 (558)
Q Consensus 187 ~~--Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~~G 263 (558)
.. .|+|+.++.+... .....++++||++|++|.+...... ...+....+..+++.++.+||+.|
T Consensus 53 ~~~l~~~~i~~~~~~~~-------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~ 119 (264)
T cd06626 53 LELLKHPNLVKYYGVEV-------------HREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHG 119 (264)
T ss_pred HHhCCCCChhheeeeEe-------------cCCEEEEEEecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCC
Confidence 00 1333333332221 2345689999999999987643321 223344456789999999999999
Q ss_pred ceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCC---CCCCCCcccHHHHHH
Q 008643 264 LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGF---LAKGTDVSPIIPALE 340 (558)
Q Consensus 264 i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~---~~~~~Di~~l~~~l~ 340 (558)
++|+|++|+||+++.++.++++|||.+..+....... . .......++..+++|+....+. .+..+|+|++|..++
T Consensus 120 i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~-~-~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~ 197 (264)
T cd06626 120 IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTM-G-EEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVL 197 (264)
T ss_pred cccCCCCHHHEEECCCCCEEEcccccccccCCCCCcc-c-ccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHH
Confidence 9999999999999999999999999998775433211 0 0001134567788999887665 678899999999999
Q ss_pred HHHHhh
Q 008643 341 AIWQNS 346 (558)
Q Consensus 341 ~l~~~~ 346 (558)
+++.+.
T Consensus 198 ~l~~g~ 203 (264)
T cd06626 198 EMATGK 203 (264)
T ss_pred HHHhCC
Confidence 999743
No 275
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.83 E-value=2e-20 Score=189.07 Aligned_cols=183 Identities=19% Similarity=0.228 Sum_probs=130.2
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCCh-----hhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHh
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIE-----PIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLE 182 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~-----~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~ 182 (558)
+.||+|++|.||+|+.+.+|+.||+|+.+.... ..+..++.+++.+
T Consensus 6 ~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l----------------------------- 56 (284)
T cd07839 6 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL----------------------------- 56 (284)
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhc-----------------------------
Confidence 679999999999999988999999998764311 1222233222221
Q ss_pred hhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCC--HHHHHHHHHHHHHHHHH
Q 008643 183 ELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGID--VGGFLTVGVSAALRQLL 260 (558)
Q Consensus 183 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~--~~~~~~~~v~~~L~~Lh 260 (558)
.|+|+.++.+.+.+.. ..+++|||++| ++.+.........+ ....+..|++.+|.|||
T Consensus 57 ------~h~~i~~~~~~~~~~~-------------~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH 116 (284)
T cd07839 57 ------KHKNIVRLYDVLHSDK-------------KLTLVFEYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCH 116 (284)
T ss_pred ------CCCCeeeHHHHhccCC-------------ceEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1566666666665543 34899999986 44443221122233 33457789999999999
Q ss_pred HCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcccHHHHH
Q 008643 261 EFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLG-FLAKGTDVSPIIPAL 339 (558)
Q Consensus 261 ~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g-~~~~~~Di~~l~~~l 339 (558)
..|++|+|+||+||+++.+|+++++|||++..+....... ....++..|++|+.+..+ ..++.+|+|++|+.+
T Consensus 117 ~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il 190 (284)
T cd07839 117 SHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCY------SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIF 190 (284)
T ss_pred HCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCc------CCCccccCCcChHHHhCCcccCcHHHHHHHHHHH
Confidence 9999999999999999999999999999987654322110 011245678899987653 357789999999999
Q ss_pred HHHHHh
Q 008643 340 EAIWQN 345 (558)
Q Consensus 340 ~~l~~~ 345 (558)
++++++
T Consensus 191 ~~l~tg 196 (284)
T cd07839 191 AELANA 196 (284)
T ss_pred HHHHhc
Confidence 999974
No 276
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.83 E-value=8.2e-20 Score=190.71 Aligned_cols=94 Identities=16% Similarity=0.108 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCC
Q 008643 247 FLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFL 326 (558)
Q Consensus 247 ~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~ 326 (558)
.+..+++.++.|||+.||+|+|+||+||+++.+++++|+|||++..+........ .+...++..|++|+....+..
T Consensus 177 ~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~ 252 (337)
T cd05054 177 SYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVR----KGDARLPLKWMAPESIFDKVY 252 (337)
T ss_pred HHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhh----ccCCCCCccccCcHHhcCCCC
Confidence 4668899999999999999999999999999999999999999987754322110 111234567999999888888
Q ss_pred CCCCCcccHHHHHHHHHH
Q 008643 327 AKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 327 ~~~~Di~~l~~~l~~l~~ 344 (558)
+..+|+|++|+.++++++
T Consensus 253 ~~~~Di~SlGv~l~el~t 270 (337)
T cd05054 253 TTQSDVWSFGVLLWEIFS 270 (337)
T ss_pred CccccHHHHHHHHHHHHH
Confidence 999999999999999986
No 277
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.83 E-value=1.8e-20 Score=192.36 Aligned_cols=193 Identities=23% Similarity=0.254 Sum_probs=130.9
Q ss_pred hHhhhcccCcceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHH
Q 008643 98 LEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFG 177 (558)
Q Consensus 98 ~~~~f~~~~~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~ 177 (558)
+++.|... +.||+|++|.||+|+.+.+|+.||+|+.......... ..
T Consensus 13 ~~~~y~~~--~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~-------------------------------~~ 59 (307)
T cd06607 13 PEKLFTDL--REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNE-------------------------------KW 59 (307)
T ss_pred cchhhhhh--eeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHH-------------------------------HH
Confidence 34444433 6799999999999999888999999987532111000 00
Q ss_pred HhhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHHHHHH
Q 008643 178 EKLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVGVSAA 255 (558)
Q Consensus 178 ~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~v~~~ 255 (558)
..+.+|+ .+...+.+.+.+.+..++.. ....+++|||++| .+.+.........+.. ..+..|++.+
T Consensus 60 ~~~~~Ei----------~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~~~~ql~~~ 127 (307)
T cd06607 60 QDIIKEV----------RFLQQLRHPNTIEYKGCYLR-EHTAWLVMEYCLG-SASDILEVHKKPLQEVEIAAICHGALQG 127 (307)
T ss_pred HHHHHHH----------HHHHhCCCCCEEEEEEEEEe-CCeEEEEHHhhCC-CHHHHHHHcccCCCHHHHHHHHHHHHHH
Confidence 0111121 12223334444444444332 4567899999986 4433322222233333 3467789999
Q ss_pred HHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHH---cCCCCCCCCc
Q 008643 256 LRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTR---LGFLAKGTDV 332 (558)
Q Consensus 256 L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~---~g~~~~~~Di 332 (558)
+.|||..|++|+|++|+||+++.+|.++++|||++........ ..+++.|++|+.+. .+..+..+|+
T Consensus 128 L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~----------~~~~~~y~aPE~~~~~~~~~~~~~sDv 197 (307)
T cd06607 128 LAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPANS----------FVGTPYWMAPEVILAMDEGQYDGKVDV 197 (307)
T ss_pred HHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCCCC----------ccCCccccCceeeeccCCCCCCcccch
Confidence 9999999999999999999999999999999999876654321 23567788988763 3567788999
Q ss_pred ccHHHHHHHHHHh
Q 008643 333 SPIIPALEAIWQN 345 (558)
Q Consensus 333 ~~l~~~l~~l~~~ 345 (558)
|++|..+++++++
T Consensus 198 ~s~G~il~el~tg 210 (307)
T cd06607 198 WSLGITCIELAER 210 (307)
T ss_pred HHHHHHHHHHHcC
Confidence 9999999999974
No 278
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.83 E-value=3.3e-20 Score=188.26 Aligned_cols=190 Identities=15% Similarity=0.169 Sum_probs=129.2
Q ss_pred ceeeeeeccEEEEEEEc---CCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhh
Q 008643 108 QTIAAASLGQVYRATLR---ETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEEL 184 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~---~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~El 184 (558)
+.||+|++|.||+|+.. .+++.||||+.+..... ... +....+..|+
T Consensus 6 ~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~---~~~---------------------------~~~~~~~~E~ 55 (288)
T cd05583 6 RVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIV---QKA---------------------------KTAEHTRTER 55 (288)
T ss_pred EEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHH---hhh---------------------------hHHHHHHHHH
Confidence 68999999999999863 46789999987642110 000 0001112222
Q ss_pred cHHH---HHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCC--HHHHHHHHHHHHHHHH
Q 008643 185 DYTL---EARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGID--VGGFLTVGVSAALRQL 259 (558)
Q Consensus 185 d~~~---Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~--~~~~~~~~v~~~L~~L 259 (558)
.... .|+|+.++...+.+ ....++||||++|++|.+..... ...+ ....+..|++.++.+|
T Consensus 56 ~~l~~~~~~~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~ql~~~l~~l 121 (288)
T cd05583 56 QVLEAVRRCPFLVTLHYAFQT-------------DTKLHLILDYVNGGELFTHLYQR-EHFTESEVRVYIAEIVLALDHL 121 (288)
T ss_pred HHHHhccCCcchhhhheeeec-------------CCEEEEEEecCCCCcHHHHHhhc-CCcCHHHHHHHHHHHHHHHHHH
Confidence 2111 14555555444433 33458999999999887653221 2222 2344567899999999
Q ss_pred HHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCC--CCCCCCcccHHH
Q 008643 260 LEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGF--LAKGTDVSPIIP 337 (558)
Q Consensus 260 h~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~--~~~~~Di~~l~~ 337 (558)
|..|++|+|+||.||+++.++.++++|||++..+....... .....++..+++|+....+. .+..+|+|++|.
T Consensus 122 H~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~ 196 (288)
T cd05583 122 HQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEER-----AYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGV 196 (288)
T ss_pred HHCCeeccCCCHHHeEECCCCCEEEEECccccccccccccc-----cccccCCccccCHHHhcCCCCCCcchhhhHHHHH
Confidence 99999999999999999999999999999987765432110 11234677888999876654 677899999999
Q ss_pred HHHHHHHhh
Q 008643 338 ALEAIWQNS 346 (558)
Q Consensus 338 ~l~~l~~~~ 346 (558)
.+++++.+.
T Consensus 197 il~el~tg~ 205 (288)
T cd05583 197 LTFELLTGA 205 (288)
T ss_pred HHHHHHhCC
Confidence 999999743
No 279
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.83 E-value=8.4e-21 Score=192.93 Aligned_cols=125 Identities=13% Similarity=0.078 Sum_probs=95.7
Q ss_pred CCceEEEEeeeCCCCCCCHHHHhcC------------CCCHH--HHHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCC
Q 008643 216 SGSRVLVMEWIDGIRCTDPQAIKGA------------GIDVG--GFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGR 281 (558)
Q Consensus 216 ~~~~vLvmE~i~G~~L~d~~~~~~~------------~~~~~--~~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~ 281 (558)
....+++|||++|++|.++...... .++.. ..+..+++.+|.|||..|++|+|+||.||+++.++.
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~ 158 (288)
T cd05093 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLL 158 (288)
T ss_pred CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCc
Confidence 4566999999999998765432211 12332 346789999999999999999999999999999999
Q ss_pred eEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 282 IAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 282 l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
++++|||++..+........ .....++..|++|+.+..+..++.+|+|++|+.++++++
T Consensus 159 ~kl~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t 217 (288)
T cd05093 159 VKIGDFGMSRDVYSTDYYRV----GGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 217 (288)
T ss_pred EEeccCCccccccCCceeec----CCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHh
Confidence 99999999886643221100 001123567899999988888889999999999999986
No 280
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.83 E-value=1.1e-20 Score=192.06 Aligned_cols=191 Identities=16% Similarity=0.120 Sum_probs=127.9
Q ss_pred cceeeeeeccEEEEEEEcCC-----CcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhH
Q 008643 107 SQTIAAASLGQVYRATLRET-----GEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLL 181 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~-----G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~ 181 (558)
.+.||+|++|.||+|..+.. +..||+|+.+......... .+.
T Consensus 17 ~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~---------------------------------~~~ 63 (293)
T cd05053 17 GKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLS---------------------------------DLV 63 (293)
T ss_pred eeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHH---------------------------------HHH
Confidence 37899999999999998533 3689999887543221000 011
Q ss_pred hhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc---------------CCCCHH-
Q 008643 182 EELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG---------------AGIDVG- 245 (558)
Q Consensus 182 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~---------------~~~~~~- 245 (558)
.| ..-+.++ -.+.+.+.+...+. ..+..+++|||++|++|.++..... ...+..
T Consensus 64 ~E------~~~l~~l---~~h~~i~~~~~~~~-~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~ 133 (293)
T cd05053 64 SE------MEMMKMI---GKHKNIINLLGVCT-QEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKD 133 (293)
T ss_pred HH------HHHHHhh---cCCCCeeeEEEEEc-CCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHH
Confidence 12 1111111 02222233333222 3456799999999999877643211 012222
Q ss_pred -HHHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC
Q 008643 246 -GFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLG 324 (558)
Q Consensus 246 -~~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g 324 (558)
..+..|++.++.|||+.|++|+|+||.||+++.+|.++++|||.+..+......... ....+.+.|++|+.+..+
T Consensus 134 ~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~ 209 (293)
T cd05053 134 LVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKT----TNGRLPVKWMAPEALFDR 209 (293)
T ss_pred HHHHHHHHHHHHHHHHHCCccccccceeeEEEcCCCeEEeCccccccccccccceecc----CCCCCCccccCHHHhccC
Confidence 236778999999999999999999999999999999999999999876542211000 001124568899988888
Q ss_pred CCCCCCCcccHHHHHHHHHH
Q 008643 325 FLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 325 ~~~~~~Di~~l~~~l~~l~~ 344 (558)
..+..+|+|++|+.+++++.
T Consensus 210 ~~~~~~Di~slG~il~el~~ 229 (293)
T cd05053 210 VYTHQSDVWSFGVLLWEIFT 229 (293)
T ss_pred CcCcccceeehhhHHHHHhc
Confidence 88889999999999999886
No 281
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.83 E-value=1.6e-20 Score=187.69 Aligned_cols=185 Identities=17% Similarity=0.201 Sum_probs=131.4
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||.|++|.||+|.. .++..||+|+.+++.... .. +
T Consensus 11 ~~~lg~g~~~~vy~~~~-~~~~~~~iK~~~~~~~~~-----------------------------------~~------~ 48 (260)
T cd05073 11 EKKLGAGQFGEVWMATY-NKHTKVAVKTMKPGSMSV-----------------------------------EA------F 48 (260)
T ss_pred EeEecCccceEEEEEEe-cCCccEEEEecCCChhHH-----------------------------------HH------H
Confidence 47899999999999997 577789999876542110 00 1
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHH--HHHHHHHHHHHHHHHHCC
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVG--GFLTVGVSAALRQLLEFG 263 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~--~~~~~~v~~~L~~Lh~~G 263 (558)
.+|.. +...+.+.+.+.+...+.+ ...+++|||++|++|.+...... ...+.. ..+..+++.++.++|+.|
T Consensus 49 ~~e~~----~l~~l~~~~i~~~~~~~~~--~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~ 122 (260)
T cd05073 49 LAEAN----VMKTLQHDKLVKLHAVVTK--EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN 122 (260)
T ss_pred HHHHH----HHHhcCCCCcceEEEEEcC--CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCC
Confidence 11111 2223344444444444433 56799999999999877643321 122322 346688999999999999
Q ss_pred ceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 008643 264 LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 264 i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~ 343 (558)
++|+|+||.||+++.++.++++|||.+..+........ ....+.+.|++|+....+..+..+|+|++|..+++++
T Consensus 123 i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~-----~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~ 197 (260)
T cd05073 123 YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR-----EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIV 197 (260)
T ss_pred ccccccCcceEEEcCCCcEEECCCcceeeccCCCcccc-----cCCcccccccCHhHhccCCcCccccchHHHHHHHHHH
Confidence 99999999999999999999999999887654221100 0112346688999998888888999999999999998
Q ss_pred H
Q 008643 344 Q 344 (558)
Q Consensus 344 ~ 344 (558)
+
T Consensus 198 t 198 (260)
T cd05073 198 T 198 (260)
T ss_pred h
Confidence 6
No 282
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.83 E-value=1e-19 Score=184.99 Aligned_cols=187 Identities=21% Similarity=0.249 Sum_probs=129.6
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCCh--hhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhh
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIE--PIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEEL 184 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~--~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~El 184 (558)
.+.||+|++|.||+|+.+.+|+.||+|+..+... ..+..
T Consensus 27 ~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~--------------------------------------- 67 (291)
T cd06639 27 IETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEA--------------------------------------- 67 (291)
T ss_pred EEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHH---------------------------------------
Confidence 3689999999999999988999999999764311 11111
Q ss_pred cHHHHHHHHHHHHHhcCCCCCeeeceeeecC----CCceEEEEeeeCCCCCCCHHHH---hcCCCC--HHHHHHHHHHHH
Q 008643 185 DYTLEARNMEDFLENFKDDPTVKIPRVYKRL----SGSRVLVMEWIDGIRCTDPQAI---KGAGID--VGGFLTVGVSAA 255 (558)
Q Consensus 185 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~----~~~~vLvmE~i~G~~L~d~~~~---~~~~~~--~~~~~~~~v~~~ 255 (558)
|...+.++ ..+.+.+.+...+... .+..+++|||++|++|.+.... ...... ....+..+++.+
T Consensus 68 ----e~~~l~~l---~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~a 140 (291)
T cd06639 68 ----EYNILQSL---PNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLG 140 (291)
T ss_pred ----HHHHHHHh---cCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHH
Confidence 11111111 1223333333333211 2457999999999999875432 111222 234467889999
Q ss_pred HHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCC-----CCCCC
Q 008643 256 LRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGF-----LAKGT 330 (558)
Q Consensus 256 L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~-----~~~~~ 330 (558)
+.+||+.|++|+|+||+||+++.++.++++|||.+..+....... ....++..|++|+....+. .+..+
T Consensus 141 l~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~ 214 (291)
T cd06639 141 LQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRR------NTSVGTPFWMAPEVIACEQQYDYSYDARC 214 (291)
T ss_pred HHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccchhcccccccc------cCccCCccccChhhhcCCCCcccccCCcc
Confidence 999999999999999999999999999999999988765422110 1123567788999876543 46789
Q ss_pred CcccHHHHHHHHHHh
Q 008643 331 DVSPIIPALEAIWQN 345 (558)
Q Consensus 331 Di~~l~~~l~~l~~~ 345 (558)
|+|++|+.+++++++
T Consensus 215 Di~slGvi~~el~~g 229 (291)
T cd06639 215 DVWSLGITAIELGDG 229 (291)
T ss_pred chHHHHHHHHHHhhC
Confidence 999999999999974
No 283
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.83 E-value=5.8e-21 Score=194.38 Aligned_cols=189 Identities=14% Similarity=0.103 Sum_probs=128.4
Q ss_pred cceeeeeeccEEEEEEEc-----CCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhH
Q 008643 107 SQTIAAASLGQVYRATLR-----ETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLL 181 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~-----~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~ 181 (558)
.+.||.|++|.||+|... .++..|++|..+......
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~--------------------------------------- 50 (291)
T cd05094 10 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAA--------------------------------------- 50 (291)
T ss_pred eeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHH---------------------------------------
Confidence 468999999999999853 245678999875432110
Q ss_pred hhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC---------------CCC--H
Q 008643 182 EELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA---------------GID--V 244 (558)
Q Consensus 182 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~---------------~~~--~ 244 (558)
+-.+.+|...+ ..+.+.+.+.+.. +.......+++|||++|++|.++...... ..+ .
T Consensus 51 -~~~~~~e~~~l----~~l~h~~i~~~~~-~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (291)
T cd05094 51 -RKDFQREAELL----TNLQHEHIVKFYG-VCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQ 124 (291)
T ss_pred -HHHHHHHHHHH----hcCCCCCcceEEE-EEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHH
Confidence 00111222222 2223332222222 22334567999999999999876543211 122 2
Q ss_pred HHHHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC
Q 008643 245 GGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLG 324 (558)
Q Consensus 245 ~~~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g 324 (558)
...+..++..++.+||+.|++|+|+||.||+++.++.++++|||++............ ....++..|++|+....+
T Consensus 125 ~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~ 200 (291)
T cd05094 125 MLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVG----GHTMLPIRWMPPESIMYR 200 (291)
T ss_pred HHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEECCCCcccccCCCceeecC----CCCCcceeecChHHhccC
Confidence 3446788999999999999999999999999999999999999998765443211000 111245678999998888
Q ss_pred CCCCCCCcccHHHHHHHHHH
Q 008643 325 FLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 325 ~~~~~~Di~~l~~~l~~l~~ 344 (558)
.+++.+|+|++|..++++++
T Consensus 201 ~~~~~~Di~slG~il~el~t 220 (291)
T cd05094 201 KFTTESDVWSFGVILWEIFT 220 (291)
T ss_pred CCCchhhHHHHHHHHHHHHh
Confidence 88889999999999999986
No 284
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.82 E-value=1.4e-20 Score=190.26 Aligned_cols=192 Identities=18% Similarity=0.213 Sum_probs=128.1
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChh--hHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhc
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEP--IIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELD 185 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~--~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld 185 (558)
+.+|+|+||+||+|+++.+|+.||+|+....... .+..++.+++.+
T Consensus 22 ~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~-------------------------------- 69 (282)
T cd06636 22 EVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKY-------------------------------- 69 (282)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHh--------------------------------
Confidence 6899999999999999889999999987543111 111111111110
Q ss_pred HHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC-CCCHH--HHHHHHHHHHHHHHHHC
Q 008643 186 YTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA-GIDVG--GFLTVGVSAALRQLLEF 262 (558)
Q Consensus 186 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~-~~~~~--~~~~~~v~~~L~~Lh~~ 262 (558)
..|+|+.++...+.... ........+++|||++|++|.++...... ..+.. ..+..|++.++.|||+.
T Consensus 70 --~~h~~i~~~~~~~~~~~-------~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~ 140 (282)
T cd06636 70 --SHHRNIATYYGAFIKKS-------PPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH 140 (282)
T ss_pred --cCCCcEEEEeeehhccc-------ccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 01233333222221100 00113456899999999999876543222 23332 34667899999999999
Q ss_pred CceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-----CCCCCCCCcccHHH
Q 008643 263 GLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-----GFLAKGTDVSPIIP 337 (558)
Q Consensus 263 Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-----g~~~~~~Di~~l~~ 337 (558)
|++|+|+||.||+++.++.++++|||++..+...... .....++..|++|+.+.. ..++..+|+|++|+
T Consensus 141 ~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~ 214 (282)
T cd06636 141 KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGR------RNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGI 214 (282)
T ss_pred CcccCCCCHHHEEECCCCCEEEeeCcchhhhhccccC------CCcccccccccCHhhcCcccCcCcCCCcccchhHHHH
Confidence 9999999999999999999999999998765432111 011236778899998752 33556799999999
Q ss_pred HHHHHHHhh
Q 008643 338 ALEAIWQNS 346 (558)
Q Consensus 338 ~l~~l~~~~ 346 (558)
.+++++.+.
T Consensus 215 ~l~el~~g~ 223 (282)
T cd06636 215 TAIEMAEGA 223 (282)
T ss_pred HHHHHHhCC
Confidence 999999753
No 285
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.82 E-value=7.6e-20 Score=182.50 Aligned_cols=193 Identities=15% Similarity=0.126 Sum_probs=127.5
Q ss_pred ceeeeeeccEEEEEEEcC---CCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhh
Q 008643 108 QTIAAASLGQVYRATLRE---TGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEEL 184 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~---~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~El 184 (558)
+.||+|+||+||+|.+.. ++..||||......... +. ..+.+|+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~---~~------------------------------~~~~~e~ 47 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLE---EV------------------------------EQFLKEG 47 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHH---HH------------------------------HHHHHHH
Confidence 358999999999998743 34579999764321110 00 0011111
Q ss_pred cHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHHHHHHHHHHHHC
Q 008643 185 DYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVGVSAALRQLLEF 262 (558)
Q Consensus 185 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~v~~~L~~Lh~~ 262 (558)
.+...+.+.+.+.+........+..+++|||+.+++|.+............ ..+..+++.++.|||+.
T Consensus 48 ----------~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 117 (262)
T cd05058 48 ----------IIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASK 117 (262)
T ss_pred ----------HHHccCCCCCcceEEEEeecCCCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 112223333333333333333455789999999999977643322222333 23557899999999999
Q ss_pred CceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHH
Q 008643 263 GLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAI 342 (558)
Q Consensus 263 Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l 342 (558)
|++|+|+||+||+++.++.++++|||++..+.......... .....+...|++|+....+..+..+|+|++|..++++
T Consensus 118 ~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el 195 (262)
T cd05058 118 KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHN--HTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 195 (262)
T ss_pred CccccccCcceEEEcCCCcEEECCccccccccCCcceeecc--cccCcCCccccChhHhccCccchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988664422110000 0112245678999998877788899999999999999
Q ss_pred HHh
Q 008643 343 WQN 345 (558)
Q Consensus 343 ~~~ 345 (558)
+..
T Consensus 196 ~~~ 198 (262)
T cd05058 196 MTR 198 (262)
T ss_pred HcC
Confidence 873
No 286
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.82 E-value=1.2e-20 Score=188.26 Aligned_cols=194 Identities=20% Similarity=0.150 Sum_probs=134.9
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||.|++|+||+|....+|..|++|+........ +.. . +
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~---~~~------------------------------~------~ 46 (267)
T cd06610 6 IEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT---SVD------------------------------E------L 46 (267)
T ss_pred eeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch---HHH------------------------------H------H
Confidence 468999999999999988889999999875432111 000 0 1
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC--CCCH--HHHHHHHHHHHHHHHHHC
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA--GIDV--GGFLTVGVSAALRQLLEF 262 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~--~~~~--~~~~~~~v~~~L~~Lh~~ 262 (558)
..|.. ....+.+.+.+.+...+ ......+++|||++|+++.+....... ..+. ...+..+++.++.+||+.
T Consensus 47 ~~e~~----~l~~l~~~~i~~~~~~~-~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~ 121 (267)
T cd06610 47 RKEVQ----AMSQCNHPNVVKYYTSF-VVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN 121 (267)
T ss_pred HHHHH----HHHhcCCCCEEEEEEEE-eeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 11111 11222333333332222 335667999999999999876543211 2333 344678999999999999
Q ss_pred CceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcccHHHHHHH
Q 008643 263 GLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLG-FLAKGTDVSPIIPALEA 341 (558)
Q Consensus 263 Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g-~~~~~~Di~~l~~~l~~ 341 (558)
|++|+|++|.||+++.++.++++|||++..+........ .......++..|++|+....+ ..+..+|+|++|..+++
T Consensus 122 ~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~--~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~ 199 (267)
T cd06610 122 GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTR--KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIE 199 (267)
T ss_pred CeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccc--cccccccCChhhcChHHHccccCcCcccchHhHhHHHHH
Confidence 999999999999999999999999999887765332110 001122467788999988777 67888999999999999
Q ss_pred HHHhh
Q 008643 342 IWQNS 346 (558)
Q Consensus 342 l~~~~ 346 (558)
++++.
T Consensus 200 l~~g~ 204 (267)
T cd06610 200 LATGA 204 (267)
T ss_pred HHhCC
Confidence 99843
No 287
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.82 E-value=1.8e-20 Score=186.39 Aligned_cols=186 Identities=16% Similarity=0.112 Sum_probs=128.7
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|++|+||+|.+ .++..+|+|+.+.+.... -+|
T Consensus 9 ~~~ig~g~~g~v~~~~~-~~~~~~~~k~~~~~~~~~-----------------------------------------~~~ 46 (256)
T cd05112 9 VQEIGSGQFGLVWLGYW-LEKRKVAIKTIREGAMSE-----------------------------------------EDF 46 (256)
T ss_pred EeeecCcccceEEEEEE-eCCCeEEEEECCCCCCCH-----------------------------------------HHH
Confidence 46899999999999998 468899999876542110 011
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHHHHHHHHHHHHCCc
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~v~~~L~~Lh~~Gi 264 (558)
..|...+.+ +.+...+.+.. +....+..+++|||++|++|.+.........+.. ..+..++..++.+||+.|+
T Consensus 47 ~~e~~~l~~----l~~~~i~~~~~-~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i 121 (256)
T cd05112 47 IEEAQVMMK----LSHPKLVQLYG-VCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNV 121 (256)
T ss_pred HHHHHHHHh----CCCCCeeeEEE-EEccCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 122222222 22222222222 2233456799999999999877643332223333 3466789999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
+|+|+||+||+++.++.++++|||++.......... ......+..+++|+....+..+..+|+|++|..+++++.
T Consensus 122 ~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~-----~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~ 196 (256)
T cd05112 122 IHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTS-----STGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFS 196 (256)
T ss_pred cccccccceEEEcCCCeEEECCCcceeecccCcccc-----cCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHc
Confidence 999999999999999999999999987664321110 001113457889999888888889999999999999986
No 288
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.82 E-value=1.5e-20 Score=189.86 Aligned_cols=188 Identities=21% Similarity=0.195 Sum_probs=128.2
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||+|++|+||+|+++.+|+.||+|+.......... .+. +.
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~--------------------------------~~~------~~ 48 (286)
T cd07847 7 SKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVI--------------------------------KKI------AL 48 (286)
T ss_pred eeecccCCeEEEEEEECCCCcEEEEEEEeecccCccc--------------------------------cHH------HH
Confidence 6799999999999999888999999987532110000 000 11
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCH--HHHHHHHHHHHHHHHHHCCce
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDV--GGFLTVGVSAALRQLLEFGLF 265 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~--~~~~~~~v~~~L~~Lh~~Gi~ 265 (558)
.|.. +...+.+.+.+.+...+. .....+++|||++|+.+...... ....+. ...+..+++.++.+||+.|++
T Consensus 49 ~e~~----~l~~~~h~~i~~~~~~~~-~~~~~~~v~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~ql~~~l~~LH~~~i~ 122 (286)
T cd07847 49 REIR----MLKQLKHPNLVNLIEVFR-RKRKLHLVFEYCDHTVLNELEKN-PRGVPEHLIKKIIWQTLQAVNFCHKHNCI 122 (286)
T ss_pred HHHH----HHHhCCCCCEeeeeeEEe-eCCEEEEEEeccCccHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence 1111 222233333333333332 24566899999999777654321 112333 345778999999999999999
Q ss_pred ecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-CCCCCCCCcccHHHHHHHHHH
Q 008643 266 HGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-GFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 266 H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-g~~~~~~Di~~l~~~l~~l~~ 344 (558)
|+|+||.||+++.+|+++++|||++..+....... ....+...+++|+.... ...+..+|+|++|..+++++.
T Consensus 123 H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~ 196 (286)
T cd07847 123 HRDVKPENILITKQGQIKLCDFGFARILTGPGDDY------TDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLT 196 (286)
T ss_pred ecCCChhhEEEcCCCcEEECccccceecCCCcccc------cCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHh
Confidence 99999999999999999999999998776543210 01124556778887764 345778999999999999997
Q ss_pred h
Q 008643 345 N 345 (558)
Q Consensus 345 ~ 345 (558)
+
T Consensus 197 g 197 (286)
T cd07847 197 G 197 (286)
T ss_pred C
Confidence 4
No 289
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.82 E-value=1.1e-20 Score=193.97 Aligned_cols=190 Identities=17% Similarity=0.169 Sum_probs=129.1
Q ss_pred cceeeeeeccEEEEEEE-----cCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhH
Q 008643 107 SQTIAAASLGQVYRATL-----RETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLL 181 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~-----~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~ 181 (558)
.+.||.|++|+||+|+. ..++..||||+.+........ ..+.
T Consensus 40 ~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~---------------------------------~~~~ 86 (302)
T cd05055 40 GKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSER---------------------------------EALM 86 (302)
T ss_pred cceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHH---------------------------------HHHH
Confidence 47899999999999985 234568999987754321100 0111
Q ss_pred hhhcHHHHHHHHHHHHHhcC-CCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC-CCCHH--HHHHHHHHHHHH
Q 008643 182 EELDYTLEARNMEDFLENFK-DDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA-GIDVG--GFLTVGVSAALR 257 (558)
Q Consensus 182 ~Eld~~~Ea~n~~~~~~~~~-~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~-~~~~~--~~~~~~v~~~L~ 257 (558)
+|+ . +...+. +.+-+.+...+ ......+++|||+.|++|.+....... ..+.. ..+..+++.++.
T Consensus 87 ~E~------~----~l~~l~~h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~ 155 (302)
T cd05055 87 SEL------K----IMSHLGNHENIVNLLGAC-TIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMA 155 (302)
T ss_pred HHH------H----HHHhccCCCCcceEEEEE-ecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHH
Confidence 111 1 111221 22222222222 223456999999999999876433221 13333 446678999999
Q ss_pred HHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHH
Q 008643 258 QLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIP 337 (558)
Q Consensus 258 ~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~ 337 (558)
|+|+.|++|+|+||+||+++.++.++++|||++..+........ .....+...|++|+....+..+..+|+|++|.
T Consensus 156 ~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGv 231 (302)
T cd05055 156 FLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVV----KGNARLPVKWMAPESIFNCVYTFESDVWSYGI 231 (302)
T ss_pred HHHHCCeehhhhccceEEEcCCCeEEECCCcccccccCCCceee----cCCCCcccccCCHhhhccCCCCcHhHHHHHHH
Confidence 99999999999999999999999999999999887654321100 01112356789999988888889999999999
Q ss_pred HHHHHHH
Q 008643 338 ALEAIWQ 344 (558)
Q Consensus 338 ~l~~l~~ 344 (558)
.++++++
T Consensus 232 il~el~t 238 (302)
T cd05055 232 LLWEIFS 238 (302)
T ss_pred HHHHHHh
Confidence 9999986
No 290
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.82 E-value=2.4e-20 Score=188.60 Aligned_cols=184 Identities=19% Similarity=0.244 Sum_probs=132.5
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChh-----hHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEP-----IIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLL 181 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~-----~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~ 181 (558)
.+.||+|++|+||+|+.+.+|+.||+|+....... .+..++.+++.
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~----------------------------- 56 (286)
T cd07846 6 LGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQ----------------------------- 56 (286)
T ss_pred eeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHh-----------------------------
Confidence 36899999999999999888999999986432211 11122222111
Q ss_pred hhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCH--HHHHHHHHHHHHHHH
Q 008643 182 EELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDV--GGFLTVGVSAALRQL 259 (558)
Q Consensus 182 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~--~~~~~~~v~~~L~~L 259 (558)
..|+|+.++.+.+..... .+++|||++|+.+.+.... ..+.+. ...+..+++.++.||
T Consensus 57 ------l~h~~i~~~~~~~~~~~~-------------~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~L 116 (286)
T cd07846 57 ------LRHENLVNLIEVFRRKKR-------------LYLVFEFVDHTVLDDLEKY-PNGLDESRVRKYLFQILRGIEFC 116 (286)
T ss_pred ------cCCcchhhHHHhcccCCe-------------EEEEEecCCccHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHH
Confidence 126777777777655443 4999999999877654322 122333 344677899999999
Q ss_pred HHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-CCCCCCCCcccHHHH
Q 008643 260 LEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-GFLAKGTDVSPIIPA 338 (558)
Q Consensus 260 h~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-g~~~~~~Di~~l~~~ 338 (558)
|+.|++|+|++|+||+++.++.++++|||++..+....... ....+...+++|+.... +..+..+|+|++|..
T Consensus 117 H~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~ 190 (286)
T cd07846 117 HSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVY------TDYVATRWYRAPELLVGDTKYGRAVDIWAVGCL 190 (286)
T ss_pred HHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcccc------CcccceeeccCcHHhccccccCchHhHHHHHHH
Confidence 99999999999999999999999999999988765433210 11124566788887754 345677999999999
Q ss_pred HHHHHHh
Q 008643 339 LEAIWQN 345 (558)
Q Consensus 339 l~~l~~~ 345 (558)
+++++.+
T Consensus 191 l~el~~g 197 (286)
T cd07846 191 VTEMLTG 197 (286)
T ss_pred HHHHHcC
Confidence 9999975
No 291
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.82 E-value=7.2e-20 Score=185.96 Aligned_cols=193 Identities=17% Similarity=0.193 Sum_probs=127.8
Q ss_pred ceeeeeeccEEEEEEEc---CCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhh
Q 008643 108 QTIAAASLGQVYRATLR---ETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEEL 184 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~---~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~El 184 (558)
+.||+|++|.||.|+.. .+|+.||+|+.+......-. ...+.+..|+
T Consensus 6 ~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~------------------------------~~~~~~~~e~ 55 (290)
T cd05613 6 KVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKA------------------------------KTTEHTRTER 55 (290)
T ss_pred eeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcc------------------------------hHHHHHHHHH
Confidence 67999999999999874 47899999987643110000 0000111111
Q ss_pred cHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCH--HHHHHHHHHHHHHHHHHC
Q 008643 185 DYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDV--GGFLTVGVSAALRQLLEF 262 (558)
Q Consensus 185 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~--~~~~~~~v~~~L~~Lh~~ 262 (558)
++...+.+++.+.-.....+.....+++|||++|++|.+..... ...+. ...+..+++.++.+||+.
T Consensus 56 ----------~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH~~ 124 (290)
T cd05613 56 ----------QVLEHIRQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQR-ERFKEQEVQIYSGEIVLALEHLHKL 124 (290)
T ss_pred ----------HHHHhcccCCChhceeeEeecCCeEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 12222222222221111122234558999999999987754322 22332 334556899999999999
Q ss_pred CceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC--CCCCCCCcccHHHHHH
Q 008643 263 GLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLG--FLAKGTDVSPIIPALE 340 (558)
Q Consensus 263 Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g--~~~~~~Di~~l~~~l~ 340 (558)
|++|+|++|.||+++.+|+++++|||++..+....... .....++..|++|+....+ ..+..+|+|++|..++
T Consensus 125 ~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~ 199 (290)
T cd05613 125 GIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVER-----AYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMY 199 (290)
T ss_pred CeeccCCCHHHeEECCCCCEEEeeCccceecccccccc-----cccccCCcccCChhhccCCCCCCCccccHHHHHHHHH
Confidence 99999999999999999999999999998765432111 1123467778899987643 3567899999999999
Q ss_pred HHHHhh
Q 008643 341 AIWQNS 346 (558)
Q Consensus 341 ~l~~~~ 346 (558)
+++++.
T Consensus 200 ~ll~g~ 205 (290)
T cd05613 200 ELLTGA 205 (290)
T ss_pred HHhcCC
Confidence 999743
No 292
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.82 E-value=1.1e-20 Score=188.72 Aligned_cols=119 Identities=17% Similarity=0.131 Sum_probs=92.8
Q ss_pred CceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCC--------eEEee
Q 008643 217 GSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGR--------IAYVD 286 (558)
Q Consensus 217 ~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~--------l~liD 286 (558)
...+++|||++|++|.+.........+.. ..+..|++.++.|||+.|++|+|+||.||+++.++. ++++|
T Consensus 72 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d 151 (258)
T cd05078 72 DESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSD 151 (258)
T ss_pred CCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecc
Confidence 44589999999999977643333223333 346789999999999999999999999999988765 69999
Q ss_pred cCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-CCCCCCCCcccHHHHHHHHHHh
Q 008643 287 FGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-GFLAKGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 287 FGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-g~~~~~~Di~~l~~~l~~l~~~ 345 (558)
||.+....... ...++..|++|+.+.. +.++..+|+|++|..+++++.+
T Consensus 152 ~g~~~~~~~~~----------~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g 201 (258)
T cd05078 152 PGISITVLPKE----------ILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSG 201 (258)
T ss_pred cccccccCCch----------hccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcC
Confidence 99887654321 1245677899998875 3467789999999999999874
No 293
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.82 E-value=2.3e-20 Score=184.59 Aligned_cols=189 Identities=20% Similarity=0.205 Sum_probs=131.8
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||.|++|.||+|....+|..|++|+........ +....+.+|+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--------------------------------~~~~~~~~e~--- 50 (258)
T cd08215 6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSE--------------------------------KEREDALNEV--- 50 (258)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEeecccCCh--------------------------------HHHHHHHHHH---
Confidence 67999999999999998889999999875432110 0000111111
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc---CCCCHH--HHHHHHHHHHHHHHHHC
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG---AGIDVG--GFLTVGVSAALRQLLEF 262 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~---~~~~~~--~~~~~~v~~~L~~Lh~~ 262 (558)
. ....+.+...+.+...+ ......+++|||++|++|.+...... ...+.. ..+..+++.++.+||+.
T Consensus 51 ---~----~l~~l~~~~~~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~ 122 (258)
T cd08215 51 ---K----ILKKLNHPNIIKYYESF-EEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR 122 (258)
T ss_pred ---H----HHHhcCCCChhheEEEE-ecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC
Confidence 1 11122222222222222 22356689999999999977544321 233333 34677899999999999
Q ss_pred CceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHH
Q 008643 263 GLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAI 342 (558)
Q Consensus 263 Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l 342 (558)
|++|+|++|.||+++.++.++++|||++........ ......+++.+++|+.......+..+|+|++|..++++
T Consensus 123 ~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l 196 (258)
T cd08215 123 KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVD------LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYEL 196 (258)
T ss_pred CEecccCChHHeEEcCCCcEEECCccceeecccCcc------eecceeeeecccChhHhccCCCCccccHHHHHHHHHHH
Confidence 999999999999999999999999999987655431 11223466778899988877788899999999999999
Q ss_pred HHh
Q 008643 343 WQN 345 (558)
Q Consensus 343 ~~~ 345 (558)
+.+
T Consensus 197 ~~g 199 (258)
T cd08215 197 CTL 199 (258)
T ss_pred HcC
Confidence 864
No 294
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.82 E-value=6.5e-20 Score=185.61 Aligned_cols=194 Identities=14% Similarity=0.113 Sum_probs=131.7
Q ss_pred ceeeeeeccEEEEEEE----cCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhh
Q 008643 108 QTIAAASLGQVYRATL----RETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEE 183 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~----~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~E 183 (558)
+.||.|+||+||.+.. ..+|..||+|+.+........ ..
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~---------------------------------~~---- 52 (283)
T cd05080 10 RVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNT---------------------------------SG---- 52 (283)
T ss_pred eecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHH---------------------------------HH----
Confidence 6799999999988653 357889999998754321100 01
Q ss_pred hcHHHHHHHHHHHHHhcCCCCCeeeceeeecC-CCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHC
Q 008643 184 LDYTLEARNMEDFLENFKDDPTVKIPRVYKRL-SGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEF 262 (558)
Q Consensus 184 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~ 262 (558)
+..|.. +...+.+.+.+.+...+... ....+++|||++|++|.+..............+..+++.++.+||+.
T Consensus 53 --~~~E~~----~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~ 126 (283)
T cd05080 53 --WKKEIN----ILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQ 126 (283)
T ss_pred --HHHHHH----HHHhCCCCCEeeEEEEEecCCCceEEEEecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 111221 22233333333333322222 23468999999999998765433323333445778999999999999
Q ss_pred CceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHH
Q 008643 263 GLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAI 342 (558)
Q Consensus 263 Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l 342 (558)
|++|+|+||+||+++.++.++++|||++..+......... .....+...+++|+....+..++.+|+|++|..++++
T Consensus 127 ~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el 203 (283)
T cd05080 127 HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV---REDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYEL 203 (283)
T ss_pred CeeccccChheEEEcCCCcEEEeecccccccCCcchhhcc---CCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHH
Confidence 9999999999999999999999999998876543221000 0011234457889988888889999999999999999
Q ss_pred HHhhc
Q 008643 343 WQNSS 347 (558)
Q Consensus 343 ~~~~~ 347 (558)
+++..
T Consensus 204 ~tg~~ 208 (283)
T cd05080 204 LTHCD 208 (283)
T ss_pred HhCCC
Confidence 98543
No 295
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.82 E-value=1.6e-20 Score=188.51 Aligned_cols=125 Identities=15% Similarity=0.070 Sum_probs=91.9
Q ss_pred CCceEEEEeeeCCCCCCCHHHHhcCC------CCHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCc
Q 008643 216 SGSRVLVMEWIDGIRCTDPQAIKGAG------IDVGGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGN 289 (558)
Q Consensus 216 ~~~~vLvmE~i~G~~L~d~~~~~~~~------~~~~~~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl 289 (558)
....+++|||++|++|.++....... .+....+..|++.++.|||+.|++|+|+||.||+++.+++++++|||+
T Consensus 67 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~ 146 (269)
T cd05042 67 SIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGL 146 (269)
T ss_pred CCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEecccc
Confidence 45569999999999998764332211 122245678999999999999999999999999999999999999999
Q ss_pred ccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-------CCCCCCCCcccHHHHHHHHHH
Q 008643 290 VAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-------GFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 290 ~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-------g~~~~~~Di~~l~~~l~~l~~ 344 (558)
+.......... . .....+...|++|+.... ...+..+|+|++|..++++++
T Consensus 147 ~~~~~~~~~~~--~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~ 204 (269)
T cd05042 147 ALEQYPEDYYI--T--KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFT 204 (269)
T ss_pred ccccccchhee--c--cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHh
Confidence 86543321100 0 001123456888998753 234667999999999999987
No 296
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.82 E-value=5.4e-20 Score=182.37 Aligned_cols=235 Identities=16% Similarity=0.154 Sum_probs=152.4
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||.|++|.||+++.+.+|+.||+|+........-.. ... ..|+ .+...+
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~-~~~-----------------------~~e~--~~l~~l-- 56 (256)
T cd08530 5 LKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKER-EDA-----------------------VNEI--RILASV-- 56 (256)
T ss_pred eeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHH-HHH-----------------------HHHH--HHHHhC--
Confidence 367999999999999998899999999876532111000 000 0000 011111
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc---CCCCHH--HHHHHHHHHHHHHHHH
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG---AGIDVG--GFLTVGVSAALRQLLE 261 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~---~~~~~~--~~~~~~v~~~L~~Lh~ 261 (558)
.|+|+.++.+.+.+. ...+++|||++|++|.+...... ...+.. ..+..+++.++.+||+
T Consensus 57 --~~~~i~~~~~~~~~~-------------~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~ 121 (256)
T cd08530 57 --NHPNIISYKEAFLDG-------------NKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHE 121 (256)
T ss_pred --CCCCchhhhhhhccC-------------CEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 145555555554433 44599999999999877543211 223333 3466789999999999
Q ss_pred CCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHH
Q 008643 262 FGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEA 341 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~ 341 (558)
.|++|+|++|.||+++.+++++++|||++........ ....+++.+++|+.+.....++.+|+|++|..+++
T Consensus 122 ~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~--------~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~ 193 (256)
T cd08530 122 QKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMA--------KTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYE 193 (256)
T ss_pred CCcccCCCCcceEEEecCCcEEEeeccchhhhccCCc--------ccccCCccccCHHHHCCCCCCchhhHHHHHHHHHH
Confidence 9999999999999999999999999999877655311 11235778899999988778888999999999999
Q ss_pred HHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 342 IWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 342 l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
++.+.. ++...+...+... ........+|..+...++.++.. |+..+|+-+
T Consensus 194 l~~g~~--p~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~---~l~~~p~~R 244 (256)
T cd08530 194 MATFAP--PFEARSMQDLRYK---VQRGKYPPIPPIYSQDLQNFIRS---MLQVKPKLR 244 (256)
T ss_pred HHhCCC--CCCCCCHHHHHHH---HhcCCCCCCchhhCHHHHHHHHH---HcCCCcccC
Confidence 987432 3333333322221 22222233444454455555543 555566554
No 297
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.82 E-value=1.7e-20 Score=190.31 Aligned_cols=188 Identities=15% Similarity=0.103 Sum_probs=126.4
Q ss_pred cceeeeeeccEEEEEEEc-----CCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhH
Q 008643 107 SQTIAAASLGQVYRATLR-----ETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLL 181 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~-----~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~ 181 (558)
.+.||.|+||.||+|... .++..||+|+.+.+....... .+.
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~---------------------------------~~~ 56 (288)
T cd05050 10 VRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQA---------------------------------DFQ 56 (288)
T ss_pred cccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHH---------------------------------HHH
Confidence 368999999999999974 257899999887543221111 011
Q ss_pred hhhcHHH--HHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC-------------------
Q 008643 182 EELDYTL--EARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA------------------- 240 (558)
Q Consensus 182 ~Eld~~~--Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~------------------- 240 (558)
+|+.... .|+|+.++...+.+ ....+++|||++|++|.+.......
T Consensus 57 ~ei~~l~~l~h~~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 123 (288)
T cd05050 57 REAALMAEFDHPNIVKLLGVCAV-------------GKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLN 123 (288)
T ss_pred HHHHHHHhcCCCchheEEEEEcC-------------CCccEEEEecCCCCCHHHHHHHcCcccccccccccccccccccc
Confidence 1111100 13333333222222 3345899999999998776432211
Q ss_pred --CCCH--HHHHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHH
Q 008643 241 --GIDV--GGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEM 316 (558)
Q Consensus 241 --~~~~--~~~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~ 316 (558)
..+. ...+..+++.+|.++|..|++|+|+||.||+++.++.++++|||++..+....-... .........|+
T Consensus 124 ~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~----~~~~~~~~~y~ 199 (288)
T cd05050 124 PLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKA----SENDAIPIRWM 199 (288)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEecCCCceEECccccceecccCccccc----cCCCccChhhc
Confidence 1111 234778899999999999999999999999999999999999999876543211000 00011245688
Q ss_pred HHHHHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 317 ANDFTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 317 a~~~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
+|+....+.++..+|+|++|+.++++++
T Consensus 200 aPE~~~~~~~~~~~Dv~slG~il~el~~ 227 (288)
T cd05050 200 PPESIFYNRYTTESDVWAYGVVLWEIFS 227 (288)
T ss_pred CHHHHhcCCCCchhHHHHHHHHHHHHHh
Confidence 9999888888889999999999999985
No 298
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.82 E-value=5.7e-20 Score=189.00 Aligned_cols=244 Identities=21% Similarity=0.226 Sum_probs=152.5
Q ss_pred CCChHhhhcccCcceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHH
Q 008643 95 GRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVD 174 (558)
Q Consensus 95 g~~~~~~f~~~~~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~ 174 (558)
....+..|... +.||.|++|+||+|+.+.+|+.||||..+......-.
T Consensus 10 ~~~~~~~~~~~--~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~------------------------------ 57 (308)
T cd06634 10 KDDPEKLFSDL--REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE------------------------------ 57 (308)
T ss_pred cCCcHHHHHHH--HheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChH------------------------------
Confidence 33455555544 6799999999999999889999999987542111000
Q ss_pred HHHHhhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHHH
Q 008643 175 EFGEKLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVGV 252 (558)
Q Consensus 175 e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~v 252 (558)
....+.+| . +....+.+.+.+.+...+. .....++||||+.| ++.+.........+.. ..+..++
T Consensus 58 -~~~~~~~e------~----~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~~l 124 (308)
T cd06634 58 -KWQDIIKE------V----RFLQKLRHPNTIQYRGCYL-REHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAVTHGA 124 (308)
T ss_pred -HHHHHHHH------H----HHHHhCCCCCcccEEEEEE-cCCeeEEEEEccCC-CHHHHHHHcCCCCCHHHHHHHHHHH
Confidence 00011111 1 1222233333333333322 24567899999975 5554433323333333 3456789
Q ss_pred HHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHH---cCCCCCC
Q 008643 253 SAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTR---LGFLAKG 329 (558)
Q Consensus 253 ~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~---~g~~~~~ 329 (558)
+.++.+||+.|++|+|++|.||+++.+|.++++|||++..+..... ..++..|++|+... .+..+..
T Consensus 125 ~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~----------~~~~~~y~aPE~~~~~~~~~~~~~ 194 (308)
T cd06634 125 LQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX----------FVGTPYWMAPEVILAMDEGQYDGK 194 (308)
T ss_pred HHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCccc----------ccCCccccCHHHHhhcccCCCCcc
Confidence 9999999999999999999999999999999999999887654321 23567788999874 3556778
Q ss_pred CCcccHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCC-CchhHHHHHHHHHHHHhhhhhcCCCCCh
Q 008643 330 TDVSPIIPALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIR-IPERFSLVIRSLLTQEGICFTLKPDFKF 401 (558)
Q Consensus 330 ~Di~~l~~~l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-lP~~~~~~~rsl~~legi~~~LdP~~~~ 401 (558)
+|+|++|+.+++++.+.. ++...+.. ............. .+..+...++.++.. |+..+|+-+.
T Consensus 195 ~Di~slG~il~el~~g~~--p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~---cl~~~P~~Rp 259 (308)
T cd06634 195 VDVWSLGITCIELAERKP--PLFNMNAM---SALYHIAQNESPALQSGHWSEYFRNFVDS---CLQKIPQDRP 259 (308)
T ss_pred cchHHHHHHHHHHHcCCC--CCccccHH---HHHHHHhhcCCCCcCcccccHHHHHHHHH---HhhCCcccCC
Confidence 999999999999987432 22222221 1122222222211 233444455555554 6777887774
No 299
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.82 E-value=3.7e-20 Score=182.89 Aligned_cols=242 Identities=17% Similarity=0.208 Sum_probs=170.0
Q ss_pred hHhhhcccCcceeeeeeccEEEEEEEcCCCcEEEEEEecCC---ChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHH
Q 008643 98 LEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPG---IEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVD 174 (558)
Q Consensus 98 ~~~~f~~~~~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~---~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~ 174 (558)
+++.| .+..+.+|+|.+|.|-.|+...+|.++|||++... .+.++.+++.++...
T Consensus 75 F~d~Y-kLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~C--------------------- 132 (463)
T KOG0607|consen 75 FEDMY-KLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQC--------------------- 132 (463)
T ss_pred HHHHH-HhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHh---------------------
Confidence 44444 34467899999999999999899999999987532 233334444333322
Q ss_pred HHHHhhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHh-cCCCCHHHHHHHHHH
Q 008643 175 EFGEKLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIK-GAGIDVGGFLTVGVS 253 (558)
Q Consensus 175 e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~-~~~~~~~~~~~~~v~ 253 (558)
+-|+|+.++.+.|.++..+ |||||-+.||+|-..+..+ ..+...+..+...|.
T Consensus 133 -------------qgh~nilqLiefFEdd~~F-------------YLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia 186 (463)
T KOG0607|consen 133 -------------QGHKNILQLIEFFEDDTRF-------------YLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIA 186 (463)
T ss_pred -------------cCCccHHHHHHHhcccceE-------------EEEEecccCchHHHHHHHhhhccHHHHHHHHHHHH
Confidence 2489999999999997666 9999999999986644332 235556667888899
Q ss_pred HHHHHHHHCCceecCCCCCCEEEecCC---CeEEeecCcccccChhhHHH-HHHHHHHHHhcCHHHHHHHHHHc-----C
Q 008643 254 AALRQLLEFGLFHGDPHPGNIFAMRDG---RIAYVDFGNVAELSQQNKQI-LIDAVVHAVNEDYAEMANDFTRL-----G 324 (558)
Q Consensus 254 ~~L~~Lh~~Gi~H~DlhPgNIlv~~dg---~l~liDFGl~~~l~~~~~~~-l~~~~~~~~~~d~~~~a~~~~~~-----g 324 (558)
++|.+||..||-|||+||+|||-.... -+||+||-+...+...+--. ...--+..-.|..++|||+++.. -
T Consensus 187 ~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~ 266 (463)
T KOG0607|consen 187 SALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQAT 266 (463)
T ss_pred HHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccc
Confidence 999999999999999999999997554 48999998776543211000 00000123468899999998864 4
Q ss_pred CCCCCCCcccHHHHHHHHHHhhcCCC-C--C--CCCHH----HHHHHHHHHHHhcCCCCchh----HHHHHHHHHH
Q 008643 325 FLAKGTDVSPIIPALEAIWQNSSGKG-L--A--DFNFR----SVTGQFNKLVYNYRIRIPER----FSLVIRSLLT 387 (558)
Q Consensus 325 ~~~~~~Di~~l~~~l~~l~~~~~~~~-~--~--~~~~~----~l~~~l~~~~~~~~~~lP~~----~~~~~rsl~~ 387 (558)
+++...|.|++|.++|-|+.+|.+.. . . .|+-+ .-.+.+++-+.+..+.+|.. ++...|.++.
T Consensus 267 ~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlis 342 (463)
T KOG0607|consen 267 FYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLIS 342 (463)
T ss_pred cccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHH
Confidence 57788999999999999999764321 0 0 12222 24567788888888888852 3444444443
No 300
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.82 E-value=3.9e-20 Score=185.77 Aligned_cols=237 Identities=19% Similarity=0.223 Sum_probs=147.1
Q ss_pred cceeeeeeccEEEEEEEcCC---CcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhh
Q 008643 107 SQTIAAASLGQVYRATLRET---GEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEE 183 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~---G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~E 183 (558)
.+.||.|++|.||+|+...+ ...||||..+........ +.+.+|
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~---------------------------------~~~~~e 57 (270)
T cd05056 11 GRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVR---------------------------------EKFLQE 57 (270)
T ss_pred eeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHH---------------------------------HHHHHH
Confidence 47899999999999998433 246899987654321100 011111
Q ss_pred hcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHHHHHHHHHHHH
Q 008643 184 LDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVGVSAALRQLLE 261 (558)
Q Consensus 184 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~v~~~L~~Lh~ 261 (558)
+ . ....+.+.+.+.+..++. ....+++|||++|++|.+.........+.. ..+..+++.++.++|+
T Consensus 58 ~------~----~l~~~~h~~i~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~ 125 (270)
T cd05056 58 A------Y----IMRQFDHPHIVKLIGVIT--ENPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLES 125 (270)
T ss_pred H------H----HHHhCCCCchhceeEEEc--CCCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 1 1 111222222222222221 244589999999999987654323233333 3466789999999999
Q ss_pred CCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHH
Q 008643 262 FGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEA 341 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~ 341 (558)
.|++|+|+||.||+++.++.++++|||++..+....... .....+...|++|+.......+..+|+|++|..+++
T Consensus 126 ~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e 200 (270)
T cd05056 126 KRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYK-----ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWE 200 (270)
T ss_pred CCeeccccChheEEEecCCCeEEccCceeeeccccccee-----cCCCCccccccChhhhccCCCCchhhhHHHHHHHHH
Confidence 999999999999999999999999999987765432110 001123456889998887778889999999999999
Q ss_pred HHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 342 IWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 342 l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
++.. ...++...+..+... .+....+...|+.+...++.++.. |...+|+-+
T Consensus 201 l~~~-g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~li~~---~l~~~P~~R 252 (270)
T cd05056 201 ILML-GVKPFQGVKNNDVIG---RIENGERLPMPPNCPPTLYSLMTK---CWAYDPSKR 252 (270)
T ss_pred HHHc-CCCCCCCCCHHHHHH---HHHcCCcCCCCCCCCHHHHHHHHH---HcCCChhhC
Confidence 8852 111333333333222 222233344455554455555543 556666544
No 301
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.82 E-value=1.9e-19 Score=185.61 Aligned_cols=190 Identities=14% Similarity=0.131 Sum_probs=128.0
Q ss_pred cceeeeeeccEEEEEEEc-------CCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHh
Q 008643 107 SQTIAAASLGQVYRATLR-------ETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEK 179 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~-------~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~ 179 (558)
.+.||+|++|.||+|+.. .++..||+|+.+......... .
T Consensus 17 ~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~---------------------------------~ 63 (314)
T cd05099 17 GKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLA---------------------------------D 63 (314)
T ss_pred eeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHH---------------------------------H
Confidence 478999999999999862 234579999877543211000 0
Q ss_pred hHhhhcHHHHHHHHHHHHHhcC-CCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC---------------CCC
Q 008643 180 LLEELDYTLEARNMEDFLENFK-DDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA---------------GID 243 (558)
Q Consensus 180 l~~Eld~~~Ea~n~~~~~~~~~-~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~---------------~~~ 243 (558)
+..|+ ++...+. +.+.+.+..++ ...+..+++|||++|++|.++...... ..+
T Consensus 64 ~~~E~----------~~l~~l~~h~~iv~~~~~~-~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~ 132 (314)
T cd05099 64 LISEM----------ELMKLIGKHKNIINLLGVC-TQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLS 132 (314)
T ss_pred HHHHH----------HHHHhccCCCCeeeEEEEE-ccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccC
Confidence 11111 1122222 22222222222 223456899999999999876543211 122
Q ss_pred HH--HHHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHH
Q 008643 244 VG--GFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFT 321 (558)
Q Consensus 244 ~~--~~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~ 321 (558)
.. ..+..+++.++.|+|++|++|+|+||+||+++.+|+++++|||.++.+........ .....+...|++|+..
T Consensus 133 ~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~ 208 (314)
T cd05099 133 FKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKK----TSNGRLPVKWMAPEAL 208 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCCCcEEEccccccccccccccccc----cccCCCCccccCHHHH
Confidence 22 23567899999999999999999999999999999999999999987654321110 0111234578999999
Q ss_pred HcCCCCCCCCcccHHHHHHHHHH
Q 008643 322 RLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 322 ~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
..+.++..+|+|++|..+++++.
T Consensus 209 ~~~~~~~~~DiwslG~~l~el~~ 231 (314)
T cd05099 209 FDRVYTHQSDVWSFGILMWEIFT 231 (314)
T ss_pred ccCCcCccchhhHHHHHHHHHHh
Confidence 88888899999999999999986
No 302
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.82 E-value=9.6e-20 Score=190.30 Aligned_cols=198 Identities=19% Similarity=0.255 Sum_probs=135.3
Q ss_pred HhCCChHhhhcccC-cceeeeeeccEEEEEEEcCCCcEEEEEEecCCCh-h----hHHHHHHHHHHHHHHhhhhhhhccC
Q 008643 93 ELGRPLEAVFSKIS-SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIE-P----IIYRDLFLFRTLASFLNGISIQKLG 166 (558)
Q Consensus 93 elg~~~~~~f~~~~-~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~-~----~i~~Dl~ilr~~~~~~~~~~~~~~~ 166 (558)
+.+..+.++...|. .++||+|++|.||+|+.+.+|+.||||+.+.... + .+.+++.+++.+
T Consensus 5 ~~~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l------------- 71 (342)
T cd07879 5 EVNKTVWELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHM------------- 71 (342)
T ss_pred hhhhhhhccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhc-------------
Confidence 44545545555555 6899999999999999988999999998754321 1 111222222111
Q ss_pred CChHHHHHHHHHhhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCC--CH
Q 008643 167 CNAELIVDEFGEKLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGI--DV 244 (558)
Q Consensus 167 ~~~~~iv~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~--~~ 244 (558)
.|+|+.++.+.+...... ......+++|||+.+ .+. ....... +.
T Consensus 72 ----------------------~h~niv~~~~~~~~~~~~-------~~~~~~~lv~e~~~~-~l~---~~~~~~~~~~~ 118 (342)
T cd07879 72 ----------------------QHENVIGLLDVFTSAVSG-------DEFQDFYLVMPYMQT-DLQ---KIMGHPLSEDK 118 (342)
T ss_pred ----------------------CCCCccchhheecccccC-------CCCceEEEEeccccc-CHH---HHHcCCCCHHH
Confidence 256666665554432211 112345899999964 332 2222223 33
Q ss_pred HHHHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-
Q 008643 245 GGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL- 323 (558)
Q Consensus 245 ~~~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~- 323 (558)
...+..+++.++.+||..|++|+|+||+||+++.+|.++++|||++........ ...++..|++|+....
T Consensus 119 ~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~~~---------~~~~~~~y~aPE~~~~~ 189 (342)
T cd07879 119 VQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAEMT---------GYVVTRWYRAPEVILNW 189 (342)
T ss_pred HHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCCCC---------CceeeecccChhhhcCc
Confidence 345678899999999999999999999999999999999999999876543221 1124566889998765
Q ss_pred CCCCCCCCcccHHHHHHHHHHh
Q 008643 324 GFLAKGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 324 g~~~~~~Di~~l~~~l~~l~~~ 345 (558)
...+..+|+|++|..+++++.+
T Consensus 190 ~~~~~~~Dv~slGvil~el~~g 211 (342)
T cd07879 190 MHYNQTVDIWSVGCIMAEMLTG 211 (342)
T ss_pred cccCchHHHHHHHHHHHHHHhC
Confidence 3467789999999999999974
No 303
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.82 E-value=1.9e-20 Score=187.74 Aligned_cols=197 Identities=17% Similarity=0.146 Sum_probs=133.8
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|++|.||+|....+|..||+|+.+......... +....+.
T Consensus 7 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~-----------------------------~~~~~~~----- 52 (266)
T cd06651 7 GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETS-----------------------------KEVSALE----- 52 (266)
T ss_pred cceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhH-----------------------------HHHHHHH-----
Confidence 478999999999999998899999999876432110000 0000111
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecC-CCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHCCc
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRL-SGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~~Gi 264 (558)
+|.. ....+.+.+-+.+...+... ....+++|||++|++|.+...... ........+..+++.++.+||+.|+
T Consensus 53 -~e~~----~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i 127 (266)
T cd06651 53 -CEIQ----LLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMI 127 (266)
T ss_pred -HHHH----HHHHcCCCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 1222 22233333333333333322 245689999999999976543221 1222334467899999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
+|+|++|.||+++.+++++++|||++..+........ -.....++..|++|+.+.....+..+|+|++|+.+++++.
T Consensus 128 ~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~ 204 (266)
T cd06651 128 VHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGT---GIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLT 204 (266)
T ss_pred eeCCCCHHHEEECCCCCEEEccCCCccccccccccCC---ccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHH
Confidence 9999999999999999999999999876643211100 0011346778899999887777888999999999999997
Q ss_pred h
Q 008643 345 N 345 (558)
Q Consensus 345 ~ 345 (558)
+
T Consensus 205 g 205 (266)
T cd06651 205 E 205 (266)
T ss_pred C
Confidence 4
No 304
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.82 E-value=2.5e-20 Score=193.89 Aligned_cols=124 Identities=14% Similarity=0.074 Sum_probs=94.0
Q ss_pred CceEEEEeeeCCCCCCCHHHHhcC---------------CCCHH--HHHHHHHHHHHHHHHHCCceecCCCCCCEEEecC
Q 008643 217 GSRVLVMEWIDGIRCTDPQAIKGA---------------GIDVG--GFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRD 279 (558)
Q Consensus 217 ~~~vLvmE~i~G~~L~d~~~~~~~---------------~~~~~--~~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~d 279 (558)
...+++|||++|++|.++...... ..... ..+..|++.++.|||+.|++|+|+||.||+++.+
T Consensus 91 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~ 170 (334)
T cd05100 91 GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTED 170 (334)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCC
Confidence 456899999999998776433211 11222 2366799999999999999999999999999999
Q ss_pred CCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 280 GRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 280 g~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
+.++|+|||.+..+......... ......+.|++|+.+..+..+..+|+|++|..+++++.
T Consensus 171 ~~~kL~Dfg~~~~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~ 231 (334)
T cd05100 171 NVMKIADFGLARDVHNIDYYKKT----TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFT 231 (334)
T ss_pred CcEEECCcccceecccccccccc----cCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHh
Confidence 99999999998876542211000 00122356899999888888889999999999999986
No 305
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.82 E-value=3.1e-20 Score=184.62 Aligned_cols=236 Identities=18% Similarity=0.175 Sum_probs=149.5
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.+|.|++|.||+|....+|+.||+|+........-.. ..+..|+.
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~--------------------------------~~~~~e~~-- 51 (265)
T cd08217 6 ETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEK--------------------------------QQLVSEVN-- 51 (265)
T ss_pred eeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHH--------------------------------HHHHHHHH--
Confidence 67999999999999998899999999875432110000 01111111
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeee-cCCCceEEEEeeeCCCCCCCHHHHh---cCCCCHH--HHHHHHHHHHHHHHH-
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYK-RLSGSRVLVMEWIDGIRCTDPQAIK---GAGIDVG--GFLTVGVSAALRQLL- 260 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~-~~~~~~vLvmE~i~G~~L~d~~~~~---~~~~~~~--~~~~~~v~~~L~~Lh- 260 (558)
....+.+.+.+.+...+. ......+++|||++|++|.+..... ....+.. ..+..+++.++.++|
T Consensus 52 --------~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~ 123 (265)
T cd08217 52 --------ILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHN 123 (265)
T ss_pred --------HHHhcCCCccceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhc
Confidence 111122222222222111 1233458999999999998764332 1123332 346778999999999
Q ss_pred ----HCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHH
Q 008643 261 ----EFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPII 336 (558)
Q Consensus 261 ----~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~ 336 (558)
..|++|+|+||+||+++.+|.++++|||++..+....... ....++..+++|+.+..+..+..+|+|++|
T Consensus 124 ~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~------~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG 197 (265)
T cd08217 124 RSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFA------KTYVGTPYYMSPEQLNHMSYDEKSDIWSLG 197 (265)
T ss_pred CccccCcceecCCCHHHEEEecCCCEEEecccccccccCCcccc------cccccCCCccChhhhcCCCCCchhHHHHHH
Confidence 9999999999999999999999999999998876543210 112357778999998888888889999999
Q ss_pred HHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcC-CCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 337 PALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYR-IRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 337 ~~l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
..+++++++.. ++...+...+.. .+.... ..+|+.+...++.++.. |...+|+-+
T Consensus 198 ~il~~l~~g~~--p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~---~l~~~p~~R 253 (265)
T cd08217 198 CLIYELCALSP--PFTARNQLQLAS----KIKEGKFRRIPYRYSSELNEVIKS---MLNVDPDKR 253 (265)
T ss_pred HHHHHHHHCCC--cccCcCHHHHHH----HHhcCCCCCCccccCHHHHHHHHH---HccCCcccC
Confidence 99999997532 223333333322 222222 23454444445555443 555566444
No 306
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.82 E-value=5.9e-20 Score=186.62 Aligned_cols=189 Identities=23% Similarity=0.225 Sum_probs=134.2
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||.|++|.||+|.++.+++.||+|+......... ...+.+|
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~---------------------------------~~~~~~e--- 49 (287)
T cd06621 6 LSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDL---------------------------------QKQILRE--- 49 (287)
T ss_pred EEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHH---------------------------------HHHHHHH---
Confidence 4789999999999999988899999998765422100 0111112
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeec-CCCceEEEEeeeCCCCCCCHHHH-hc--CCCC--HHHHHHHHHHHHHHHHH
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKR-LSGSRVLVMEWIDGIRCTDPQAI-KG--AGID--VGGFLTVGVSAALRQLL 260 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~-~~~~~vLvmE~i~G~~L~d~~~~-~~--~~~~--~~~~~~~~v~~~L~~Lh 260 (558)
.. ....+.+.+.+.+...+.+ ..+..+++|||++|++|.++... .. ...+ ....+..+++.+|.|||
T Consensus 50 ---~~----~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH 122 (287)
T cd06621 50 ---LE----INKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLH 122 (287)
T ss_pred ---HH----HHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 11 2222333333333333332 23456899999999999775332 11 1122 23457789999999999
Q ss_pred HCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHH
Q 008643 261 EFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALE 340 (558)
Q Consensus 261 ~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~ 340 (558)
..|++|+|++|+||+++.++.++++|||++..+...... ...++..|++|+....+..+..+|+|++|+.++
T Consensus 123 ~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~--------~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~ 194 (287)
T cd06621 123 SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAG--------TFTGTSFYMAPERIQGKPYSITSDVWSLGLTLL 194 (287)
T ss_pred HCCcccCCCCHHHEEEecCCeEEEeeccccccccccccc--------cccCCccccCHHHhcCCCCCchhhHHHHHHHHH
Confidence 999999999999999999999999999998766433211 123566788999888888888999999999999
Q ss_pred HHHHhh
Q 008643 341 AIWQNS 346 (558)
Q Consensus 341 ~l~~~~ 346 (558)
+++.+.
T Consensus 195 ~l~~g~ 200 (287)
T cd06621 195 EVAQNR 200 (287)
T ss_pred HHHhCC
Confidence 999854
No 307
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.82 E-value=3.3e-20 Score=185.76 Aligned_cols=196 Identities=16% Similarity=0.147 Sum_probs=132.0
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhH-HHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhc
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPII-YRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELD 185 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i-~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld 185 (558)
.+.||+|++|.||+|..+.+|+.||||+.+......- ...+ ..
T Consensus 7 ~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~------------------------------~~------ 50 (265)
T cd06652 7 GKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEV------------------------------NA------ 50 (265)
T ss_pred eeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHH------------------------------HH------
Confidence 4689999999999999988999999998753211100 0000 01
Q ss_pred HHHHHHHHHHHHHhcCCCCCeeeceeeecC-CCceEEEEeeeCCCCCCCHHHHhcC-CCCHHHHHHHHHHHHHHHHHHCC
Q 008643 186 YTLEARNMEDFLENFKDDPTVKIPRVYKRL-SGSRVLVMEWIDGIRCTDPQAIKGA-GIDVGGFLTVGVSAALRQLLEFG 263 (558)
Q Consensus 186 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~vLvmE~i~G~~L~d~~~~~~~-~~~~~~~~~~~v~~~L~~Lh~~G 263 (558)
+.+|...+.+ +.+.+.+.+...+.+. ....+++|||++|++|.+....... .......+..+++.++.++|+.|
T Consensus 51 ~~~E~~~l~~----l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~ 126 (265)
T cd06652 51 LECEIQLLKN----LLHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNM 126 (265)
T ss_pred HHHHHHHHHh----cCCCCeeeEEeEeccCCCceEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 1222222222 2233323322222211 2346799999999999876432211 22233456788999999999999
Q ss_pred ceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 008643 264 LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 264 i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~ 343 (558)
++|+|+||.||+++.+|.++++|||++..+....... .-.....++..|++|+.+.....+..+|+|++|+.+++++
T Consensus 127 i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~ 203 (265)
T cd06652 127 IVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSG---TGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEML 203 (265)
T ss_pred EecCCCCHHHEEecCCCCEEECcCccccccccccccc---cccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHh
Confidence 9999999999999999999999999987654311000 0011124667889999988777788899999999999999
Q ss_pred Hh
Q 008643 344 QN 345 (558)
Q Consensus 344 ~~ 345 (558)
.+
T Consensus 204 ~g 205 (265)
T cd06652 204 TE 205 (265)
T ss_pred hC
Confidence 74
No 308
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.82 E-value=2.5e-20 Score=187.14 Aligned_cols=119 Identities=18% Similarity=0.104 Sum_probs=91.5
Q ss_pred CCceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCC-------eEEee
Q 008643 216 SGSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGR-------IAYVD 286 (558)
Q Consensus 216 ~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~-------l~liD 286 (558)
....+++|||++|+++...........+.. ..+..|++.|+.|||+.|++|+|+||.||+++.+|. ++++|
T Consensus 76 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d 155 (262)
T cd05077 76 DVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSD 155 (262)
T ss_pred CCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCC
Confidence 345689999999998876543322223333 346789999999999999999999999999987764 89999
Q ss_pred cCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHH-cCCCCCCCCcccHHHHHHHHHH
Q 008643 287 FGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTR-LGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 287 FGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~-~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
||++..+..... ..++..|++|+.+. .+..+..+|+|++|..+++++.
T Consensus 156 ~g~~~~~~~~~~----------~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~ 204 (262)
T cd05077 156 PGIPITVLSRQE----------CVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICY 204 (262)
T ss_pred CCCCccccCccc----------ccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHh
Confidence 999876543211 12466789999876 4567778999999999999974
No 309
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.82 E-value=5.4e-20 Score=204.36 Aligned_cols=193 Identities=16% Similarity=0.151 Sum_probs=122.5
Q ss_pred ccC-cceeeeeeccEEEEEEEcCC----CcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHH
Q 008643 104 KIS-SQTIAAASLGQVYRATLRET----GEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGE 178 (558)
Q Consensus 104 ~~~-~~pIg~Gs~GqVy~a~~~~~----G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~ 178 (558)
.|. .+.||+|+||+||+|++..+ |..||||........ +......+..
T Consensus 133 ~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~----e~~~~e~l~~----------------------- 185 (566)
T PLN03225 133 DFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV----EIWMNERVRR----------------------- 185 (566)
T ss_pred CeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh----HHHHHHHHHh-----------------------
Confidence 444 57899999999999999878 899999986543211 1111111000
Q ss_pred hhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCC----------------
Q 008643 179 KLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGI---------------- 242 (558)
Q Consensus 179 ~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~---------------- 242 (558)
..+.++..+...+..... .......+++|||+++++|.++........
T Consensus 186 ---------~~~~~~~~~~~~~~~~~~-------~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~ 249 (566)
T PLN03225 186 ---------ACPNSCADFVYGFLEPVS-------SKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKG 249 (566)
T ss_pred ---------hchhhHHHHHHhhhcccc-------cccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhcccc
Confidence 001112222222211100 111345589999999998876543211100
Q ss_pred -----CHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEec-CCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHH
Q 008643 243 -----DVGGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMR-DGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEM 316 (558)
Q Consensus 243 -----~~~~~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~-dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~ 316 (558)
.....+..|++.+|.|||+.||+|||+||+|||++. +++++|+|||++..+....... .....+++.|+
T Consensus 250 ~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~-----~~~~~~t~~Y~ 324 (566)
T PLN03225 250 LERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYI-----PKEFLLDPRYA 324 (566)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEeCCCCcEEEEeCCCccccccccccC-----CcccccCCCcc
Confidence 011246788999999999999999999999999986 5899999999998654321110 01124577888
Q ss_pred HHHHHHcCCC----------------------CCCCCcccHHHHHHHHHH
Q 008643 317 ANDFTRLGFL----------------------AKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 317 a~~~~~~g~~----------------------~~~~Di~~l~~~l~~l~~ 344 (558)
||+.+..... +..+|+|++|+.+++++.
T Consensus 325 APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~ 374 (566)
T PLN03225 325 APEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAF 374 (566)
T ss_pred ChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHh
Confidence 8886543322 234599999999999985
No 310
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.82 E-value=1.6e-20 Score=189.19 Aligned_cols=193 Identities=18% Similarity=0.189 Sum_probs=128.9
Q ss_pred ceeeeeeccEEEEEEEcC----CCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhh
Q 008643 108 QTIAAASLGQVYRATLRE----TGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEE 183 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~----~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~E 183 (558)
+.||+|++|.||+|++.. +|+.||||+.++....... ..
T Consensus 10 ~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~---------------------------------~~---- 52 (284)
T cd05038 10 KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHR---------------------------------SD---- 52 (284)
T ss_pred eeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHH---------------------------------HH----
Confidence 689999999999999743 4789999998765322000 00
Q ss_pred hcHHHHHHHHHHHHHhcCCCCCeeeceeeec-CCCceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHHHHHHHHHHH
Q 008643 184 LDYTLEARNMEDFLENFKDDPTVKIPRVYKR-LSGSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVGVSAALRQLL 260 (558)
Q Consensus 184 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~-~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~v~~~L~~Lh 260 (558)
+..|.. ....+.+...+.+...... .....+++|||++|++|.++........+.. ..+..+++.+|.+||
T Consensus 53 --~~~ei~----~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH 126 (284)
T cd05038 53 --FEREIE----ILRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLG 126 (284)
T ss_pred --HHHHHH----HHHhCCCCChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHH
Confidence 111111 1111222222222221111 1234689999999999987654333223333 446788999999999
Q ss_pred HCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHH
Q 008643 261 EFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALE 340 (558)
Q Consensus 261 ~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~ 340 (558)
+.|++|+|+||.||+++.++.++++|||++..+......... .........+++|+....+..+...|+|++|..++
T Consensus 127 ~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~---~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~ 203 (284)
T cd05038 127 SQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYV---KEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLY 203 (284)
T ss_pred hCCeecCCCCHHhEEEcCCCCEEEcccccccccccCCcceec---cCCCCCcccccCcHHHccCCCCcccchHHHhhhhh
Confidence 999999999999999999999999999999887633211000 00112334577888887777888899999999999
Q ss_pred HHHHhh
Q 008643 341 AIWQNS 346 (558)
Q Consensus 341 ~l~~~~ 346 (558)
+++++.
T Consensus 204 el~tg~ 209 (284)
T cd05038 204 ELFTYG 209 (284)
T ss_pred eeeccC
Confidence 998753
No 311
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.82 E-value=2.3e-20 Score=184.31 Aligned_cols=192 Identities=20% Similarity=0.196 Sum_probs=135.6
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|++|.||+|..+.+|+.|++|+.+..... ... ...+..|+
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~------------------------------~~~~~~e~-- 50 (260)
T cd06606 5 GELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS--EEE------------------------------LEALEREI-- 50 (260)
T ss_pred eeEeeecCceEEEEEEECCCCcEEEEEEeeccccc--hHH------------------------------HHHHHHHH--
Confidence 37899999999999999879999999998654321 000 00111111
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecC-CCceEEEEeeeCCCCCCCHHHHhcCCCCH--HHHHHHHHHHHHHHHHHCC
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRL-SGSRVLVMEWIDGIRCTDPQAIKGAGIDV--GGFLTVGVSAALRQLLEFG 263 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~vLvmE~i~G~~L~d~~~~~~~~~~~--~~~~~~~v~~~L~~Lh~~G 263 (558)
. ....+.+.+.+.+.....+. ....+++|||++|++|.+...... ..+. ...+..+++.++.+||+.|
T Consensus 51 ----~----~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~ 121 (260)
T cd06606 51 ----R----ILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHSNG 121 (260)
T ss_pred ----H----HHHHcCCCCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 1 22222333322222222221 156789999999999987644322 2333 3446788999999999999
Q ss_pred ceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 008643 264 LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 264 i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~ 343 (558)
++|+|++|.||+++.+|.++|+|||.+.......... ......++..+++|+....+..+..+|+|++|..+++++
T Consensus 122 ~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~----~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~ 197 (260)
T cd06606 122 IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGE----GTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMA 197 (260)
T ss_pred ccccCCCHHHEEEcCCCCEEEcccccEEecccccccc----cccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHH
Confidence 9999999999999999999999999998876653210 011234678889999988888888999999999999999
Q ss_pred Hh
Q 008643 344 QN 345 (558)
Q Consensus 344 ~~ 345 (558)
.+
T Consensus 198 ~g 199 (260)
T cd06606 198 TG 199 (260)
T ss_pred hC
Confidence 84
No 312
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.82 E-value=3.2e-20 Score=190.33 Aligned_cols=188 Identities=19% Similarity=0.164 Sum_probs=128.3
Q ss_pred ceeeeeeccEEEEEEEcCCCc----EEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhh
Q 008643 108 QTIAAASLGQVYRATLRETGE----DVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEE 183 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~----~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~E 183 (558)
+.||+|++|+||+|+++.+|+ .||+|+..+........
T Consensus 13 ~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~-------------------------------------- 54 (303)
T cd05110 13 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANV-------------------------------------- 54 (303)
T ss_pred cccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHH--------------------------------------
Confidence 689999999999999877776 46888876543211100
Q ss_pred hcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHHHHHHHHHHHH
Q 008643 184 LDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVGVSAALRQLLE 261 (558)
Q Consensus 184 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~v~~~L~~Lh~ 261 (558)
.+.+|.. ....+.+.+.+.+...+. ....+++|||++++++.+.........+.. ..+..+++.+|.|||+
T Consensus 55 -~~~~e~~----~~~~l~h~niv~~~~~~~--~~~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~ 127 (303)
T cd05110 55 -EFMDEAL----IMASMDHPHLVRLLGVCL--SPTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE 127 (303)
T ss_pred -HHHHHHH----HHHhCCCCCcccEEEEEc--CCCceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhh
Confidence 0111111 122222333333333222 234579999999999877644332223333 4467899999999999
Q ss_pred CCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHH
Q 008643 262 FGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEA 341 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~ 341 (558)
.|++|+|+||+||+++.++.++++|||++..+......... ........|++|+.......+..+|+|++|..+++
T Consensus 128 ~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~----~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~e 203 (303)
T cd05110 128 RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA----DGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWE 203 (303)
T ss_pred cCeeccccccceeeecCCCceEEccccccccccCccccccc----CCCccccccCCHHHhccCCCChHHHHHHHHHHHHH
Confidence 99999999999999999999999999999876543221100 01123456889998887778888999999999999
Q ss_pred HHH
Q 008643 342 IWQ 344 (558)
Q Consensus 342 l~~ 344 (558)
+++
T Consensus 204 l~t 206 (303)
T cd05110 204 LMT 206 (303)
T ss_pred HHh
Confidence 876
No 313
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.82 E-value=2.1e-20 Score=190.05 Aligned_cols=189 Identities=17% Similarity=0.180 Sum_probs=125.9
Q ss_pred ceeeeeeccEEEEEEEcC-----CCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHh
Q 008643 108 QTIAAASLGQVYRATLRE-----TGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLE 182 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~-----~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~ 182 (558)
+.||+|+||.||+|+... ++..|++|+.+.+....-. ..+..
T Consensus 6 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~---------------------------------~~~~~ 52 (290)
T cd05045 6 KTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSEL---------------------------------RDLLS 52 (290)
T ss_pred ccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHH---------------------------------HHHHH
Confidence 679999999999998742 2357999987654321000 01111
Q ss_pred hhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC----------------------
Q 008643 183 ELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA---------------------- 240 (558)
Q Consensus 183 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~---------------------- 240 (558)
|+ . ....+.+.+-+.+...+ ......+++|||++|++|.++......
T Consensus 53 E~------~----~l~~l~h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (290)
T cd05045 53 EF------N----LLKQVNHPHVIKLYGAC-SQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDE 121 (290)
T ss_pred HH------H----HHhhCCCCCEeeEEEEE-ecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccc
Confidence 11 1 11222233223222222 234556999999999998775432110
Q ss_pred -CCCHH--HHHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHH
Q 008643 241 -GIDVG--GFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMA 317 (558)
Q Consensus 241 -~~~~~--~~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a 317 (558)
..+.. ..+..+++.++.+||+.|++|+|+||.||+++.++.++++|||++..+....... . .........|++
T Consensus 122 ~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~--~--~~~~~~~~~y~a 197 (290)
T cd05045 122 RALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYV--K--RSKGRIPVKWMA 197 (290)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCCCcEEeccccccccccCccchh--c--ccCCCCCccccC
Confidence 11222 2456789999999999999999999999999999999999999987664332110 0 011223567889
Q ss_pred HHHHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 318 NDFTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 318 ~~~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
|+.......+..+|+|++|..++++++
T Consensus 198 pE~~~~~~~~~~~Di~slG~~l~el~t 224 (290)
T cd05045 198 IESLFDHIYTTQSDVWSFGVLLWEIVT 224 (290)
T ss_pred HHHHccCCcchHhHHHHHHHHHHHHHh
Confidence 998877778888999999999999986
No 314
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.82 E-value=1.6e-19 Score=182.42 Aligned_cols=190 Identities=18% Similarity=0.180 Sum_probs=128.8
Q ss_pred cceeeeeeccEEEEEEEcC-----CCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhH
Q 008643 107 SQTIAAASLGQVYRATLRE-----TGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLL 181 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~-----~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~ 181 (558)
.+.||.|++|.||+|.++. ++..||+|..+.......
T Consensus 11 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~-------------------------------------- 52 (277)
T cd05036 11 LRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQD-------------------------------------- 52 (277)
T ss_pred eeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHH--------------------------------------
Confidence 3689999999999999965 677899998764322110
Q ss_pred hhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC------CCCHHH--HHHHHHH
Q 008643 182 EELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA------GIDVGG--FLTVGVS 253 (558)
Q Consensus 182 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~------~~~~~~--~~~~~v~ 253 (558)
+.++..|.. ....+.+..-+.+... .......+++|||++|++|.++...... ..+... .+..+++
T Consensus 53 -~~~~~~e~~----~l~~l~~~~i~~~~~~-~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~ 126 (277)
T cd05036 53 -ESDFLMEAL----IMSKFNHQNIVRLIGV-SFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVA 126 (277)
T ss_pred -HHHHHHHHH----HHHhCCCCCEeeEEEE-EccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHH
Confidence 111222222 2222333322222222 2224556899999999999876543321 123222 3677899
Q ss_pred HHHHHHHHCCceecCCCCCCEEEecCC---CeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCC
Q 008643 254 AALRQLLEFGLFHGDPHPGNIFAMRDG---RIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGT 330 (558)
Q Consensus 254 ~~L~~Lh~~Gi~H~DlhPgNIlv~~dg---~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~ 330 (558)
.++.|||+.|++|+|+||+||+++.+| .++++|||++..+........ .........|++|+....+.++..+
T Consensus 127 ~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~ 202 (277)
T cd05036 127 KGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRK----GGRAMLPIKWMPPEAFLDGIFTSKT 202 (277)
T ss_pred HHHHHHHHCCEeecccchheEEEeccCCCcceEeccCccccccCCccceec----CCCCCccHhhCCHHHHhcCCcCchh
Confidence 999999999999999999999998765 599999999987643211000 0001124578999999888899999
Q ss_pred CcccHHHHHHHHHH
Q 008643 331 DVSPIIPALEAIWQ 344 (558)
Q Consensus 331 Di~~l~~~l~~l~~ 344 (558)
|+|++|+.+++++.
T Consensus 203 DiwslG~il~el~~ 216 (277)
T cd05036 203 DVWSFGVLLWEIFS 216 (277)
T ss_pred HHHHHHHHHHHHHc
Confidence 99999999999985
No 315
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.82 E-value=1.8e-20 Score=194.34 Aligned_cols=196 Identities=14% Similarity=0.105 Sum_probs=129.4
Q ss_pred ceeeee--eccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhc
Q 008643 108 QTIAAA--SLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELD 185 (558)
Q Consensus 108 ~pIg~G--s~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld 185 (558)
+.||.| +++.||+++.+.+|+.||||..+...... +....+.+|+
T Consensus 4 ~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~--------------------------------~~~~~~~~e~- 50 (327)
T cd08227 4 TVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTN--------------------------------EMVTFLQGEL- 50 (327)
T ss_pred hhccccccceEEEEEEeecccCcEEEEEEechhhccH--------------------------------HHHHHHHHHH-
Confidence 468888 78999999999999999999876432110 0001111122
Q ss_pred HHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCH--HHHHHHHHHHHHHHHHHC
Q 008643 186 YTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDV--GGFLTVGVSAALRQLLEF 262 (558)
Q Consensus 186 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~--~~~~~~~v~~~L~~Lh~~ 262 (558)
++...+.+.+-+.+... ....+..++||||++|+++.++..... .+.+. ...+..|++.||.|||+.
T Consensus 51 ---------~~l~~l~hpniv~~~~~-~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~ 120 (327)
T cd08227 51 ---------HVSKLFNHPNIVPYRAT-FIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHM 120 (327)
T ss_pred ---------HHHHhcCCCCeeeEEEE-EEECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 12223333332322222 223456699999999999987654322 22333 345778899999999999
Q ss_pred CceecCCCCCCEEEecCCCeEEeecCcccccChhhHH-HHHHHHHHHHhcCHHHHHHHHHHcC--CCCCCCCcccHHHHH
Q 008643 263 GLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQ-ILIDAVVHAVNEDYAEMANDFTRLG--FLAKGTDVSPIIPAL 339 (558)
Q Consensus 263 Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~-~l~~~~~~~~~~d~~~~a~~~~~~g--~~~~~~Di~~l~~~l 339 (558)
|++|+|+||.||+++.++++++.|||....+...... ...........++..|++|+.+..+ .++..+|+|++|+.+
T Consensus 121 ~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il 200 (327)
T cd08227 121 GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITA 200 (327)
T ss_pred CEecCCCChhhEEEecCCcEEEcccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHH
Confidence 9999999999999999999999999876544321110 0000000112245668999988753 367789999999999
Q ss_pred HHHHHhh
Q 008643 340 EAIWQNS 346 (558)
Q Consensus 340 ~~l~~~~ 346 (558)
++++.+.
T Consensus 201 ~el~~g~ 207 (327)
T cd08227 201 CELANGH 207 (327)
T ss_pred HHHHHCC
Confidence 9999853
No 316
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.82 E-value=1.2e-20 Score=191.10 Aligned_cols=238 Identities=13% Similarity=0.135 Sum_probs=145.9
Q ss_pred cceeeeeeccEEEEEEEc-----CCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhH
Q 008643 107 SQTIAAASLGQVYRATLR-----ETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLL 181 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~-----~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~ 181 (558)
.+.||.|+||.||+|... .++..||+|........ ..
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~-~~------------------------------------- 51 (280)
T cd05092 10 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASES-AR------------------------------------- 51 (280)
T ss_pred ccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHH-HH-------------------------------------
Confidence 468999999999999752 34678999976532211 00
Q ss_pred hhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC--------------CCCH--H
Q 008643 182 EELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA--------------GIDV--G 245 (558)
Q Consensus 182 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~--------------~~~~--~ 245 (558)
-++.+|.. ....+.+.+.+.+... .......+++|||++|++|.++...... ..+. .
T Consensus 52 --~~~~~e~~----~l~~l~h~~i~~~~~~-~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~ 124 (280)
T cd05092 52 --QDFQREAE----LLTVLQHQHIVRFYGV-CTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQM 124 (280)
T ss_pred --HHHHHHHH----HHhcCCCCCCceEEEE-EecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHH
Confidence 01122222 2223333333333222 2334567999999999999776432211 1222 2
Q ss_pred HHHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCC
Q 008643 246 GFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGF 325 (558)
Q Consensus 246 ~~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~ 325 (558)
..+..|++.++.|||+.|++|+|+||+||+++.++.++++|||++..+........ .....++..|++|+....+.
T Consensus 125 ~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~ 200 (280)
T cd05092 125 LAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRV----GGRTMLPIRWMPPESILYRK 200 (280)
T ss_pred HHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEEECCCCceeEcCCCceeec----CCCccccccccCHHHhccCC
Confidence 34667899999999999999999999999999999999999999876543221100 01112345688999888888
Q ss_pred CCCCCCcccHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 326 LAKGTDVSPIIPALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 326 ~~~~~Di~~l~~~l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
++..+|+|++|+.++++++. ...++...+...... ......+...|..+..-++.++.. |+..||+-+
T Consensus 201 ~~~~~Di~slG~il~el~~~-g~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~li~~---cl~~~P~~R 268 (280)
T cd05092 201 FTTESDIWSFGVVLWEIFTY-GKQPWYQLSNTEAIE---CITQGRELERPRTCPPEVYAIMQG---CWQREPQQR 268 (280)
T ss_pred cCchhhHHHHHHHHHHHHcC-CCCCCccCCHHHHHH---HHHcCccCCCCCCCCHHHHHHHHH---HccCChhhC
Confidence 88899999999999999862 111222333333222 222222333333333334444444 666777554
No 317
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.81 E-value=2.7e-20 Score=188.22 Aligned_cols=185 Identities=21% Similarity=0.230 Sum_probs=130.1
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCCh-----hhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIE-----PIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLL 181 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~-----~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~ 181 (558)
.+.||+|++|.||+|+++.+|+.||||+.+.... +.+..++.+++.+
T Consensus 6 ~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l---------------------------- 57 (288)
T cd07833 6 LGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQL---------------------------- 57 (288)
T ss_pred EEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhc----------------------------
Confidence 3689999999999999988999999998764321 1112222211111
Q ss_pred hhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCH--HHHHHHHHHHHHHHH
Q 008643 182 EELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDV--GGFLTVGVSAALRQL 259 (558)
Q Consensus 182 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~--~~~~~~~v~~~L~~L 259 (558)
+|+|+.++.+.+.. ....+++|||++++.+..... ...+.+. ...+..+++.++.+|
T Consensus 58 -------~~~~i~~~~~~~~~-------------~~~~~iv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~L 116 (288)
T cd07833 58 -------RHENIVNLKEAFRR-------------KGRLYLVFEYVERTLLELLEA-SPGGLPPDAVRSYIWQLLQAIAYC 116 (288)
T ss_pred -------CCCCeeehhheEEE-------------CCEEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHH
Confidence 13343333333322 345699999999866654322 2222333 345678899999999
Q ss_pred HHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcccHHHH
Q 008643 260 LEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLG-FLAKGTDVSPIIPA 338 (558)
Q Consensus 260 h~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g-~~~~~~Di~~l~~~ 338 (558)
|+.|++|+|++|+||+++.+|.++++|||++..+........ ....++..+++|+..... ..+..+|+|++|..
T Consensus 117 H~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~-----~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~ 191 (288)
T cd07833 117 HSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPL-----TDYVATRWYRAPELLVGDTNYGKPVDVWAIGCI 191 (288)
T ss_pred HHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccc-----cCcccccCCcCCchhcCCCCcCchhhHHHHHHH
Confidence 999999999999999999999999999999887765432100 111245668899888777 77788999999999
Q ss_pred HHHHHHh
Q 008643 339 LEAIWQN 345 (558)
Q Consensus 339 l~~l~~~ 345 (558)
+++++.+
T Consensus 192 l~~l~~g 198 (288)
T cd07833 192 MAELLDG 198 (288)
T ss_pred HHHHHhC
Confidence 9999974
No 318
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.81 E-value=9.2e-20 Score=184.44 Aligned_cols=192 Identities=19% Similarity=0.157 Sum_probs=129.8
Q ss_pred cceeeeeeccEEEEEEE----cCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHh
Q 008643 107 SQTIAAASLGQVYRATL----RETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLE 182 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~----~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~ 182 (558)
.+.||+|+||.||+|+. ..+|+.||||..+........ .
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~----------------------------------~--- 51 (284)
T cd05081 9 IQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLR----------------------------------D--- 51 (284)
T ss_pred eeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHH----------------------------------H---
Confidence 36899999999999985 357889999987654221100 0
Q ss_pred hhcHHHHHHHHHHHHHhcCCCCCeeeceeeecC-CCceEEEEeeeCCCCCCCHHHHhcCCCC--HHHHHHHHHHHHHHHH
Q 008643 183 ELDYTLEARNMEDFLENFKDDPTVKIPRVYKRL-SGSRVLVMEWIDGIRCTDPQAIKGAGID--VGGFLTVGVSAALRQL 259 (558)
Q Consensus 183 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~vLvmE~i~G~~L~d~~~~~~~~~~--~~~~~~~~v~~~L~~L 259 (558)
+.+|.. ....+.+.+.+.+..+.... ....+++|||++|++|.+.........+ ....+..+++.+|.||
T Consensus 52 ---~~~e~~----~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~L 124 (284)
T cd05081 52 ---FEREIE----ILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYL 124 (284)
T ss_pred ---HHHHHH----HHHhCCCCCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHH
Confidence 111111 12223333333332222211 2346899999999999876433222233 3345678999999999
Q ss_pred HHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHH
Q 008643 260 LEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPAL 339 (558)
Q Consensus 260 h~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l 339 (558)
|+.|++|+|+||+||+++.+++++++|||++..+......... .........|++|+....+..+..+|+|++|..+
T Consensus 125 H~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 201 (284)
T cd05081 125 GSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKV---REPGESPIFWYAPESLTESKFSVASDVWSFGVVL 201 (284)
T ss_pred HHCCceeccCCHhhEEECCCCeEEECCCcccccccCCCcceee---cCCCCCceEeeCHHHhccCCcChHHHHHHHHHHH
Confidence 9999999999999999999999999999999877543211000 0001123347889988878888889999999999
Q ss_pred HHHHHh
Q 008643 340 EAIWQN 345 (558)
Q Consensus 340 ~~l~~~ 345 (558)
++++..
T Consensus 202 ~el~~~ 207 (284)
T cd05081 202 YELFTY 207 (284)
T ss_pred HHHhhc
Confidence 999874
No 319
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.81 E-value=3.2e-20 Score=185.94 Aligned_cols=196 Identities=16% Similarity=0.151 Sum_probs=132.9
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|++|.||+|+++.+|+.||+|+........... +....+.
T Consensus 7 ~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~-----------------------------~~~~~~~----- 52 (264)
T cd06653 7 GKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETS-----------------------------KEVNALE----- 52 (264)
T ss_pred eeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhh-----------------------------HHHHHHH-----
Confidence 468999999999999998899999999864321110000 0000111
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecC-CCceEEEEeeeCCCCCCCHHHHhcCCCC--HHHHHHHHHHHHHHHHHHCC
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRL-SGSRVLVMEWIDGIRCTDPQAIKGAGID--VGGFLTVGVSAALRQLLEFG 263 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~vLvmE~i~G~~L~d~~~~~~~~~~--~~~~~~~~v~~~L~~Lh~~G 263 (558)
+|.. ....+.+...+.+...+.+. ....+++|||++|++|.+..... ...+ ....+..+++.++.+||+.|
T Consensus 53 -~ei~----~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~al~~LH~~~ 126 (264)
T cd06653 53 -CEIQ----LLKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAY-GALTENVTRRYTRQILQGVSYLHSNM 126 (264)
T ss_pred -HHHH----HHHHcCCCCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 1222 22233343333333333322 34568999999999987654321 1223 33446789999999999999
Q ss_pred ceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 008643 264 LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 264 i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~ 343 (558)
++|+|+||+||+++.++.++++|||++..+......... .....++..|++|+.......+..+|+|++|+.+++++
T Consensus 127 i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 203 (264)
T cd06653 127 IVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTG---IKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEML 203 (264)
T ss_pred EecCCCCHHHEEEcCCCCEEECccccccccccccccCcc---ccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHH
Confidence 999999999999999999999999999876431110000 01123567789999988777788899999999999999
Q ss_pred Hh
Q 008643 344 QN 345 (558)
Q Consensus 344 ~~ 345 (558)
++
T Consensus 204 ~g 205 (264)
T cd06653 204 TE 205 (264)
T ss_pred hC
Confidence 74
No 320
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.81 E-value=2.3e-20 Score=188.57 Aligned_cols=189 Identities=16% Similarity=0.134 Sum_probs=124.1
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|++|.||+|+.+.+|+.||||+.+......- ....+..|+
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~--------------------------------~~~~~~~e~-- 50 (285)
T cd07861 5 IEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEG--------------------------------VPSTAIREI-- 50 (285)
T ss_pred eeEecccCceEEEEEEECCCCcEEEEEEeccccccCC--------------------------------chHHHHHHH--
Confidence 3689999999999999988999999998764321100 000011111
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc--CCCCHH--HHHHHHHHHHHHHHHHC
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG--AGIDVG--GFLTVGVSAALRQLLEF 262 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~--~~~~~~--~~~~~~v~~~L~~Lh~~ 262 (558)
. ....+.+.+.+.+...+. .....+++|||++| .+.+...... ...+.. ..+..|++.+|.|||+.
T Consensus 51 ----~----~l~~l~h~~i~~~~~~~~-~~~~~~~v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~ 120 (285)
T cd07861 51 ----S----LLKELQHPNIVCLQDVLM-QESRLYLIFEFLSM-DLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR 120 (285)
T ss_pred ----H----HHHhcCCCCEeeeEEEEe-eCCeEEEEEecCCC-CHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC
Confidence 1 111222222222222222 23456999999985 5544322111 123333 34678999999999999
Q ss_pred CceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcccHHHHHHH
Q 008643 263 GLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLG-FLAKGTDVSPIIPALEA 341 (558)
Q Consensus 263 Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g-~~~~~~Di~~l~~~l~~ 341 (558)
|++|+|+||.||+++.+|.++|+|||++.......... ..-.++..+++|+..... ..+..+|+|++|+.+++
T Consensus 121 ~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~ 194 (285)
T cd07861 121 RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVY------THEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAE 194 (285)
T ss_pred CeeecCCCHHHEEEcCCCcEEECcccceeecCCCcccc------cCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999987654322110 001235668889877543 35677999999999999
Q ss_pred HHHh
Q 008643 342 IWQN 345 (558)
Q Consensus 342 l~~~ 345 (558)
++++
T Consensus 195 l~tg 198 (285)
T cd07861 195 MATK 198 (285)
T ss_pred HHHC
Confidence 9985
No 321
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.81 E-value=1.6e-20 Score=200.66 Aligned_cols=93 Identities=16% Similarity=0.126 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCC
Q 008643 248 LTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLA 327 (558)
Q Consensus 248 ~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~ 327 (558)
+..+++.+|.|||..|++|+|+||.||+++.++.++++|||++..+....... . .....+++.|++|+....+..+
T Consensus 244 ~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~--~--~~~~~~~~~y~aPE~~~~~~~~ 319 (401)
T cd05107 244 FSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYI--S--KGSTFLPLKWMAPESIFNNLYT 319 (401)
T ss_pred HHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcceecccccccc--c--CCCcCCCCceeChHHhcCCCCC
Confidence 55789999999999999999999999999999999999999998654321100 0 0011235678999998888888
Q ss_pred CCCCcccHHHHHHHHHH
Q 008643 328 KGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 328 ~~~Di~~l~~~l~~l~~ 344 (558)
+.+|+|++|..+++++.
T Consensus 320 ~~~DvwslGvil~e~l~ 336 (401)
T cd05107 320 TLSDVWSFGILLWEIFT 336 (401)
T ss_pred cHhHHHHHHHHHHHHHH
Confidence 89999999999999986
No 322
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.81 E-value=3.2e-20 Score=209.16 Aligned_cols=129 Identities=17% Similarity=0.099 Sum_probs=97.8
Q ss_pred CceEEEEeeeCCCCCCCHHHHhcCC--CCHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccC
Q 008643 217 GSRVLVMEWIDGIRCTDPQAIKGAG--IDVGGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELS 294 (558)
Q Consensus 217 ~~~vLvmE~i~G~~L~d~~~~~~~~--~~~~~~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~ 294 (558)
...||-||||+-..+.+++...... .+..-.++++|++||.|+|+.|++|||+||.|||+++++.|||.|||++....
T Consensus 669 ~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~ 748 (1351)
T KOG1035|consen 669 LILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLK 748 (1351)
T ss_pred eEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhh
Confidence 3468999999987777765544443 44455678999999999999999999999999999999999999999998743
Q ss_pred hhhHHHHHHHH------------HHHHhcCHHHHHHHHHHcC---CCCCCCCcccHHHHHHHHHHh
Q 008643 295 QQNKQILIDAV------------VHAVNEDYAEMANDFTRLG---FLAKGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 295 ~~~~~~l~~~~------------~~~~~~d~~~~a~~~~~~g---~~~~~~Di~~l~~~l~~l~~~ 345 (558)
........... ....-|+.-|+||++...- .++.++|+|++|..+.+||..
T Consensus 749 ~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yP 814 (1351)
T KOG1035|consen 749 ENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYP 814 (1351)
T ss_pred hhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhcc
Confidence 21111000000 0012477889999998754 378899999999999999974
No 323
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.81 E-value=1.4e-19 Score=189.22 Aligned_cols=195 Identities=19% Similarity=0.220 Sum_probs=135.9
Q ss_pred hhhcccC-cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChh-----hHHHHHHHHHHHHHHhhhhhhhccCCChHHHH
Q 008643 100 AVFSKIS-SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEP-----IIYRDLFLFRTLASFLNGISIQKLGCNAELIV 173 (558)
Q Consensus 100 ~~f~~~~-~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~-----~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv 173 (558)
++...+. ..+||+|++|+||+|+...+|+.||||+....... .+..++.+++.
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~--------------------- 70 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKH--------------------- 70 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHh---------------------
Confidence 3333444 57899999999999999888999999987643211 11112211111
Q ss_pred HHHHHhhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHH
Q 008643 174 DEFGEKLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVS 253 (558)
Q Consensus 174 ~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~ 253 (558)
..|+|+.++...+...... ......+++|||+ |++|.++......+.+....+..+++
T Consensus 71 --------------l~h~~iv~~~~~~~~~~~~-------~~~~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~ql~ 128 (343)
T cd07851 71 --------------MDHENVIGLLDVFTPASSL-------EDFQDVYLVTHLM-GADLNNIVKCQKLSDDHIQFLVYQIL 128 (343)
T ss_pred --------------ccCCCHHHHHHHhhccccc-------cccccEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHH
Confidence 1367777777665443221 1123458999999 45665543322223333455778999
Q ss_pred HHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCc
Q 008643 254 AALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLG-FLAKGTDV 332 (558)
Q Consensus 254 ~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g-~~~~~~Di 332 (558)
.++.+||..|++|+|++|.||+++.+|+++++|||++........ ...++..|++|+....+ ..+..+|+
T Consensus 129 ~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~---------~~~~~~~y~aPE~~~~~~~~~~~~Dv 199 (343)
T cd07851 129 RGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDEMT---------GYVATRWYRAPEIMLNWMHYNQTVDI 199 (343)
T ss_pred HHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccccccccc---------CCcccccccCHHHHhCCCCCCchHhH
Confidence 999999999999999999999999999999999999987654311 11245668888887643 46678999
Q ss_pred ccHHHHHHHHHHhh
Q 008643 333 SPIIPALEAIWQNS 346 (558)
Q Consensus 333 ~~l~~~l~~l~~~~ 346 (558)
|++|..+++++++.
T Consensus 200 wslGv~l~elltg~ 213 (343)
T cd07851 200 WSVGCIMAELLTGK 213 (343)
T ss_pred HHHHHHHHHHHhCC
Confidence 99999999999853
No 324
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.81 E-value=2.2e-19 Score=182.44 Aligned_cols=190 Identities=16% Similarity=0.120 Sum_probs=127.3
Q ss_pred cceeeeeeccEEEEEEEcC-----CCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhH
Q 008643 107 SQTIAAASLGQVYRATLRE-----TGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLL 181 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~-----~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~ 181 (558)
.+.||+|++|.||+|..+. .+..||+|..+...... .
T Consensus 11 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~--~------------------------------------ 52 (288)
T cd05061 11 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR--E------------------------------------ 52 (288)
T ss_pred eeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHH--H------------------------------------
Confidence 3689999999999997642 35589999865432110 0
Q ss_pred hhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCC---------CC--HHHHHHH
Q 008643 182 EELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAG---------ID--VGGFLTV 250 (558)
Q Consensus 182 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~---------~~--~~~~~~~ 250 (558)
..++.+|.. +...+.+...+.+...+ ......+++|||++|++|.+........ .. ....+..
T Consensus 53 -~~~~~~e~~----~l~~l~~~~i~~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (288)
T cd05061 53 -RIEFLNEAS----VMKGFTCHHVVRLLGVV-SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 126 (288)
T ss_pred -HHHHHHHHH----HHHhCCCCCeeeEEEEE-cCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHH
Confidence 011112222 22223332222222222 2345679999999999998865432110 11 1234667
Q ss_pred HHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCC
Q 008643 251 GVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGT 330 (558)
Q Consensus 251 ~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~ 330 (558)
+++.++.|||++|++|+|+||.||+++.++.++++|||++..+........ .....++..|++|+....+..+..+
T Consensus 127 ~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~~----~~~~~~~~~y~~pE~~~~~~~~~~~ 202 (288)
T cd05061 127 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVRWMAPESLKDGVFTTSS 202 (288)
T ss_pred HHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECcCCccccccccccccc----cCCCcccccccCHHHhccCCCChHh
Confidence 899999999999999999999999999999999999999876543221000 0001134568899998888889999
Q ss_pred CcccHHHHHHHHHH
Q 008643 331 DVSPIIPALEAIWQ 344 (558)
Q Consensus 331 Di~~l~~~l~~l~~ 344 (558)
|+|++|+.+++++.
T Consensus 203 DvwslG~~l~el~~ 216 (288)
T cd05061 203 DMWSFGVVLWEITS 216 (288)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999986
No 325
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.81 E-value=3.4e-20 Score=190.68 Aligned_cols=190 Identities=15% Similarity=0.179 Sum_probs=125.7
Q ss_pred cCcceeeeeeccEEEEEEEcC--CCcEEEEEEecCCC-hhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhH
Q 008643 105 ISSQTIAAASLGQVYRATLRE--TGEDVAIKVQRPGI-EPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLL 181 (558)
Q Consensus 105 ~~~~pIg~Gs~GqVy~a~~~~--~G~~VAVKv~rp~~-~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~ 181 (558)
++...||+|+||.||+|+.+. ++..||+|..+... .....+++.
T Consensus 4 ~~g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~--------------------------------- 50 (317)
T cd07867 4 YEGCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIA--------------------------------- 50 (317)
T ss_pred eeceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHH---------------------------------
Confidence 344689999999999999743 56789999876431 111111111
Q ss_pred hhhcHHHHHHHHHHHHHhcCCCCCeeeceeeec-CCCceEEEEeeeCCCCCCCHHHHhc--------CCCCH--HHHHHH
Q 008643 182 EELDYTLEARNMEDFLENFKDDPTVKIPRVYKR-LSGSRVLVMEWIDGIRCTDPQAIKG--------AGIDV--GGFLTV 250 (558)
Q Consensus 182 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~-~~~~~vLvmE~i~G~~L~d~~~~~~--------~~~~~--~~~~~~ 250 (558)
+...+.+.+.+.+..++.. .....+++|||+++ .+.+...... ..++. ...+..
T Consensus 51 --------------~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~ 115 (317)
T cd07867 51 --------------LLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLY 115 (317)
T ss_pred --------------HHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHH
Confidence 2222334444444444332 23456899999986 4433322110 11222 235678
Q ss_pred HHHHHHHHHHHCCceecCCCCCCEEE----ecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-CC
Q 008643 251 GVSAALRQLLEFGLFHGDPHPGNIFA----MRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-GF 325 (558)
Q Consensus 251 ~v~~~L~~Lh~~Gi~H~DlhPgNIlv----~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-g~ 325 (558)
|++.||.|||+.|++|+|+||+||++ +.+|+++|+|||++..+....... . -.....++..|+||+.+.. ..
T Consensus 116 qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~-~--~~~~~~~t~~y~aPE~~~~~~~ 192 (317)
T cd07867 116 QILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPL-A--DLDPVVVTFWYRAPELLLGARH 192 (317)
T ss_pred HHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccc-c--ccCcceecccccCcHHhcCCCc
Confidence 99999999999999999999999999 456799999999998765432110 0 0011235778999998865 44
Q ss_pred CCCCCCcccHHHHHHHHHHh
Q 008643 326 LAKGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 326 ~~~~~Di~~l~~~l~~l~~~ 345 (558)
.+..+|+|++|+.+++++++
T Consensus 193 ~~~~~DiwSlG~il~el~tg 212 (317)
T cd07867 193 YTKAIDIWAIGCIFAELLTS 212 (317)
T ss_pred cCcHHHHHhHHHHHHHHHhC
Confidence 67889999999999999985
No 326
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.81 E-value=2.7e-19 Score=180.65 Aligned_cols=189 Identities=20% Similarity=0.165 Sum_probs=126.5
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|+||.||+|+.+.+|+.||||+.+........ . .+..|+
T Consensus 6 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~--~-------------------------------~~~~e~-- 50 (283)
T cd06617 6 IEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQ--K-------------------------------RLLMDL-- 50 (283)
T ss_pred EEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHH--H-------------------------------HHHHHH--
Confidence 36799999999999999889999999988765322110 0 011111
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHH-h--cCCCCHH--HHHHHHHHHHHHHHHH
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAI-K--GAGIDVG--GFLTVGVSAALRQLLE 261 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~-~--~~~~~~~--~~~~~~v~~~L~~Lh~ 261 (558)
.. ......+.+.+.+...+. ..+..+++|||++| .+.+.... . ....+.. ..+..|++.++.+||+
T Consensus 51 ----~~---~~~~~~~~~iv~~~~~~~-~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 121 (283)
T cd06617 51 ----DI---SMRSVDCPYTVTFYGALF-REGDVWICMEVMDT-SLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHS 121 (283)
T ss_pred ----HH---HHHHcCCCCeeeeeEEEe-cCCcEEEEhhhhcc-cHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 11 111122222233333222 24567999999985 44433221 1 1123333 3567899999999999
Q ss_pred C-CceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc----CCCCCCCCcccHH
Q 008643 262 F-GLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL----GFLAKGTDVSPII 336 (558)
Q Consensus 262 ~-Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~----g~~~~~~Di~~l~ 336 (558)
+ |++|+|+||+||+++.+++++++|||++..+...... ....++..|++|+.+.. ...+..+|+|++|
T Consensus 122 ~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG 194 (283)
T cd06617 122 KLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAK-------TIDAGCKPYMAPERINPELNQKGYDVKSDVWSLG 194 (283)
T ss_pred cCCeecCCCCHHHEEECCCCCEEEeeccccccccccccc-------ccccCCccccChhhcCCcccccccCccccchhhH
Confidence 7 9999999999999999999999999998876432211 11235667889998754 2246779999999
Q ss_pred HHHHHHHHhh
Q 008643 337 PALEAIWQNS 346 (558)
Q Consensus 337 ~~l~~l~~~~ 346 (558)
+.+++++.+.
T Consensus 195 ~~l~~l~~g~ 204 (283)
T cd06617 195 ITMIELATGR 204 (283)
T ss_pred HHHHHHHhCC
Confidence 9999999854
No 327
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.81 E-value=2.8e-20 Score=183.92 Aligned_cols=173 Identities=16% Similarity=0.112 Sum_probs=126.8
Q ss_pred eeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHHHHHHH
Q 008643 113 ASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYTLEARN 192 (558)
Q Consensus 113 Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~~Ea~n 192 (558)
|++|.||+|+++.+|+.||+|+.+..... ..+. + .+. ..-++|
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~~--~~~~---~---------------------------~~~-----~~~~~~ 46 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSEY--SRER---L---------------------------TII-----PHCVPN 46 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhhh--hhHH---H---------------------------HHH-----hcCCCc
Confidence 88999999999999999999988654210 0000 0 000 011466
Q ss_pred HHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHHHHHHHHHHHHCCceecCCC
Q 008643 193 MEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVGVSAALRQLLEFGLFHGDPH 270 (558)
Q Consensus 193 ~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~v~~~L~~Lh~~Gi~H~Dlh 270 (558)
+.++.+.+.+.. ..+++|||++|++|.+..... ...+.. ..+..+++.++.|+|+.|++|+|+|
T Consensus 47 i~~~~~~~~~~~-------------~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlk 112 (237)
T cd05576 47 MVCLHKYIVSED-------------SVFLVLQHAEGGKLWSHISKF-LNIPEECVKRWAAEMVVALDALHREGIVCRDLN 112 (237)
T ss_pred eeehhhheecCC-------------eEEEEEecCCCCCHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCC
Confidence 666666655443 348999999999997754322 234333 4467889999999999999999999
Q ss_pred CCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHh
Q 008643 271 PGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 271 PgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~ 345 (558)
|.||+++.+|.++++|||.+..+..... ...++..+++|+....+..++..|+|++|..+++++++
T Consensus 113 p~Nil~~~~~~~~l~df~~~~~~~~~~~---------~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g 178 (237)
T cd05576 113 PNNILLDDRGHIQLTYFSRWSEVEDSCD---------GEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTG 178 (237)
T ss_pred HHHEEEcCCCCEEEecccchhccccccc---------cCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHC
Confidence 9999999999999999998766544211 11234557889988777778899999999999999974
No 328
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.81 E-value=5e-20 Score=187.03 Aligned_cols=188 Identities=18% Similarity=0.155 Sum_probs=125.7
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.++||+|++|.||+|+.+.+|+.||||..+......... . +
T Consensus 10 ~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~---------------------------------~------~ 50 (291)
T cd07844 10 LDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPF---------------------------------T------A 50 (291)
T ss_pred EEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCch---------------------------------h------H
Confidence 478999999999999998899999999876542110000 0 0
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCH--HHHHHHHHHHHHHHHHHCCc
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDV--GGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~--~~~~~~~v~~~L~~Lh~~Gi 264 (558)
.+|.. +...+.+.+.+.+..+ .......++||||++| +|.+.........+. ...+..+++.||.|||+.|+
T Consensus 51 ~~E~~----~l~~l~h~~i~~~~~~-~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i 124 (291)
T cd07844 51 IREAS----LLKDLKHANIVTLHDI-IHTKKTLTLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRV 124 (291)
T ss_pred HHHHH----HHhhCCCcceeeEEEE-EecCCeEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 11111 1222223322222222 2234566999999986 665543222223333 34567799999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-CCCCCCCCcccHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-GFLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-g~~~~~~Di~~l~~~l~~l~ 343 (558)
+|+|+||.||+++.+|.++++|||++.......... ....++..+++|+.... ...+..+|+|++|..+++++
T Consensus 125 ~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~ 198 (291)
T cd07844 125 LHRDLKPQNLLISERGELKLADFGLARAKSVPSKTY------SNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMA 198 (291)
T ss_pred ecccCCHHHEEEcCCCCEEECccccccccCCCCccc------cccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHH
Confidence 999999999999999999999999987543221110 00123556788887754 34567899999999999999
Q ss_pred Hh
Q 008643 344 QN 345 (558)
Q Consensus 344 ~~ 345 (558)
.+
T Consensus 199 ~g 200 (291)
T cd07844 199 TG 200 (291)
T ss_pred hC
Confidence 75
No 329
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.81 E-value=4.3e-20 Score=186.50 Aligned_cols=188 Identities=20% Similarity=0.214 Sum_probs=128.9
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCCh-hhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIE-PIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~-~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
+.||.|++|.||+|+.+.+|+.||||+.+.... .... ..+..|+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~---------------------------------~~~~~e~-- 50 (286)
T cd07832 6 GRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIP---------------------------------NQALREI-- 50 (286)
T ss_pred eecccCCCcEEEEEEECCCCceEEEEEEEcccccchhh---------------------------------HHHHHHH--
Confidence 579999999999999988999999998764321 1000 0111111
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHHHHHHHHHHHHCCc
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~v~~~L~~Lh~~Gi 264 (558)
. +...+.+.+.+.+...+ ......++||||+ |++|.+.........+.. ..+..+++.+|.|||+.|+
T Consensus 51 ----~----~l~~~~~~~i~~~~~~~-~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 120 (286)
T cd07832 51 ----K----ALQACQHPYVVKLLDVF-PHGSGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGI 120 (286)
T ss_pred ----H----HHHhCCCCCCcceeeEE-ecCCeeEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 1 11122222222222222 2245569999999 989877543333333433 4467899999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcccHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLG-FLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g-~~~~~~Di~~l~~~l~~l~ 343 (558)
+|+|+||.||+++.+|.++++|||++........... ....++..+++|+..... ..++.+|+|++|..+++++
T Consensus 121 ~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~ 195 (286)
T cd07832 121 MHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLY-----SHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELL 195 (286)
T ss_pred ecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCcc-----ccccCcccccCceeeeccccCCchhHHHHHHHHHHHHH
Confidence 9999999999999999999999999987765432100 112356778888876543 4577899999999999999
Q ss_pred Hh
Q 008643 344 QN 345 (558)
Q Consensus 344 ~~ 345 (558)
.+
T Consensus 196 tg 197 (286)
T cd07832 196 NG 197 (286)
T ss_pred cC
Confidence 75
No 330
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.81 E-value=1.5e-20 Score=178.21 Aligned_cols=269 Identities=14% Similarity=0.183 Sum_probs=182.3
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.+|.|.++.|+.|....+.+.++||+.+|--.+.|.+++.||+.+.+
T Consensus 44 rk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~g-------------------------------- 91 (338)
T KOG0668|consen 44 RKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRG-------------------------------- 91 (338)
T ss_pred HHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccC--------------------------------
Confidence 579999999999999888999999999999999999999999988752
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHCCceec
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGLFHG 267 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi~H~ 267 (558)
++|+..+.....+.. +...-|+.||+++.+...+- .....-..+.+..+++.+|.|||+.||+||
T Consensus 92 --g~NIi~L~DiV~Dp~-----------SktpaLiFE~v~n~Dfk~ly--~tl~d~dIryY~~elLkALdyCHS~GImHR 156 (338)
T KOG0668|consen 92 --GPNIIKLLDIVKDPE-----------SKTPSLIFEYVNNTDFKQLY--PTLTDYDIRYYIYELLKALDYCHSMGIMHR 156 (338)
T ss_pred --CCCeeehhhhhcCcc-----------ccCchhHhhhhccccHHHHh--hhhchhhHHHHHHHHHHHHhHHHhcCcccc
Confidence 677777777665532 33446889999886554321 111222346788999999999999999999
Q ss_pred CCCCCCEEEecC-CCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHhh
Q 008643 268 DPHPGNIFAMRD-GRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNS 346 (558)
Q Consensus 268 DlhPgNIlv~~d-g~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~~ 346 (558)
|+||.|++|++. -.++++|||++....+..-.... .. ..|-.=++-++....+....|+|++|+.+..+.-..
T Consensus 157 DVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnVR-----VA-SRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrk 230 (338)
T KOG0668|consen 157 DVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR-----VA-SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 230 (338)
T ss_pred cCCcceeeechhhceeeeeecchHhhcCCCceeeee-----ee-hhhcCCchheeechhccccHHHHHHHHHHHHHHhcc
Confidence 999999999975 57999999999876654322111 00 011111233345566677889999999999988654
Q ss_pred cCCCCCCCCHHHH--------HHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC--hhHhhhHHHHHHhhcC
Q 008643 347 SGKGLADFNFRSV--------TGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK--FLEVAYPYVAKRLLTD 416 (558)
Q Consensus 347 ~~~~~~~~~~~~l--------~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~--~~~~a~p~v~~~ll~~ 416 (558)
.+.--..-|..++ ++++.+-+.+|.+.+||.|..++..-... .-.+-.+++-+ ...+|-.++.+.|.-|
T Consensus 231 epFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk-~w~~Fi~~~n~hl~~peaiDlldklLrYD 309 (338)
T KOG0668|consen 231 EPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRK-PWSRFINSENQHLVSPEAIDLLDKLLRYD 309 (338)
T ss_pred CcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccc-cHHHhCCccccccCChHHHHHHHHHHhhc
Confidence 3332233455543 46677778899999999998766543211 00111222222 2256777777777766
Q ss_pred CC--HHHHHHHHHHHh
Q 008643 417 PN--PALRERLIQVLF 430 (558)
Q Consensus 417 ~~--p~~r~~l~~~l~ 430 (558)
.. +..++.+....|
T Consensus 310 HqeRlTakEam~HpyF 325 (338)
T KOG0668|consen 310 HQERLTAKEAMAHPYF 325 (338)
T ss_pred cccccchHHHhcCchH
Confidence 43 333444444444
No 331
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.81 E-value=7.5e-21 Score=184.38 Aligned_cols=227 Identities=21% Similarity=0.235 Sum_probs=146.9
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCC-h---hhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhh
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGI-E---PIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEE 183 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~-~---~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~E 183 (558)
.-+|+|+-|+|++++.+.+|...|||-++..- . ++|..|+.++-.-
T Consensus 98 ~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s------------------------------ 147 (391)
T KOG0983|consen 98 GDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKS------------------------------ 147 (391)
T ss_pred HhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhc------------------------------
Confidence 46899999999999999999999999887532 2 1222332221110
Q ss_pred hcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHH---HHHHHHHHHHHHH
Q 008643 184 LDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGF---LTVGVSAALRQLL 260 (558)
Q Consensus 184 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~---~~~~v~~~L~~Lh 260 (558)
+..+.+++.++.|-.+..| ++.||.+. .-+..+....+..+ ++.+ +...+..+|.||-
T Consensus 148 ----~dcpyIV~c~GyFi~n~dV-------------~IcMelMs-~C~ekLlkrik~pi-PE~ilGk~tva~v~AL~YLK 208 (391)
T KOG0983|consen 148 ----HDCPYIVQCFGYFITNTDV-------------FICMELMS-TCAEKLLKRIKGPI-PERILGKMTVAIVKALYYLK 208 (391)
T ss_pred ----cCCCeeeeeeeEEeeCchH-------------HHHHHHHH-HHHHHHHHHhcCCc-hHHhhhhhHHHHHHHHHHHH
Confidence 0023344444444433333 67788763 11111211112222 2222 3455778889986
Q ss_pred -HCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC---CCCCCCCcccHH
Q 008643 261 -EFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLG---FLAKGTDVSPII 336 (558)
Q Consensus 261 -~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g---~~~~~~Di~~l~ 336 (558)
.||++|||+||.|||++..|++|++|||+++++.+..... -..|-+.||||+-+.-. -+.-.+|+|++|
T Consensus 209 eKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAht-------rsAGC~~YMaPERidp~~~~kYDiRaDVWSlG 281 (391)
T KOG0983|consen 209 EKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHT-------RSAGCAAYMAPERIDPPDKPKYDIRADVWSLG 281 (391)
T ss_pred HhcceeecccCccceEEccCCCEEeecccccceeecccccc-------cccCCccccCccccCCCCCCccchhhhhhhhc
Confidence 5799999999999999999999999999999987653221 12478899999887643 233457999999
Q ss_pred HHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchh--HHHHHHHHHHHHhhhhhcCC
Q 008643 337 PALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPER--FSLVIRSLLTQEGICFTLKP 397 (558)
Q Consensus 337 ~~l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~--~~~~~rsl~~legi~~~LdP 397 (558)
..+.++.++.++-...+.+|.. +.+++.+.|..+|+. |+..+++++.. |++-|+
T Consensus 282 ITlveLaTg~yPy~~c~tdFe~----ltkvln~ePP~L~~~~gFSp~F~~fv~~---CL~kd~ 337 (391)
T KOG0983|consen 282 ITLVELATGQYPYKGCKTDFEV----LTKVLNEEPPLLPGHMGFSPDFQSFVKD---CLTKDH 337 (391)
T ss_pred cchhhhhcccCCCCCCCccHHH----HHHHHhcCCCCCCcccCcCHHHHHHHHH---HhhcCc
Confidence 9999999876554444455544 344555777777753 56666666654 555555
No 332
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.81 E-value=8.3e-21 Score=186.15 Aligned_cols=186 Identities=19% Similarity=0.172 Sum_probs=135.3
Q ss_pred cCcceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhh
Q 008643 105 ISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEEL 184 (558)
Q Consensus 105 ~~~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~El 184 (558)
++.+.||.|--|.|-.+..+.||+.+|+||.+-.-.
T Consensus 65 is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~K-------------------------------------------- 100 (400)
T KOG0604|consen 65 ISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSPK-------------------------------------------- 100 (400)
T ss_pred ehhhhhccccCCceEEEEeccchhhhHHHHHhcCHH--------------------------------------------
Confidence 456889999999999999999999999999764311
Q ss_pred cHHHHHHHHHHHHHhcC-CCCCeeeceeeec-C--CCceEEEEeeeCCCCCCCHHHHhcC---CCCHHHHHHHHHHHHHH
Q 008643 185 DYTLEARNMEDFLENFK-DDPTVKIPRVYKR-L--SGSRVLVMEWIDGIRCTDPQAIKGA---GIDVGGFLTVGVSAALR 257 (558)
Q Consensus 185 d~~~Ea~n~~~~~~~~~-~~~~v~vP~v~~~-~--~~~~vLvmE~i~G~~L~d~~~~~~~---~~~~~~~~~~~v~~~L~ 257 (558)
|++-+++.-... +...|.|-.||.. + .....+|||+++||.|......+.. .+....-+..+|..+++
T Consensus 101 -----ARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~ 175 (400)
T KOG0604|consen 101 -----ARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVR 175 (400)
T ss_pred -----HHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHH
Confidence 111111211111 1222334444431 2 2344689999999999765443322 12334458889999999
Q ss_pred HHHHCCceecCCCCCCEEEec---CCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCccc
Q 008643 258 QLLEFGLFHGDPHPGNIFAMR---DGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSP 334 (558)
Q Consensus 258 ~Lh~~Gi~H~DlhPgNIlv~~---dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~ 334 (558)
|||..+|-|||+||+|+|.+. |..+||+|||+++.-....- +..-+-++.|+||++....-++...|+|+
T Consensus 176 ~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~-------L~TPc~TPyYvaPevlg~eKydkscdmwS 248 (400)
T KOG0604|consen 176 YLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGD-------LMTPCFTPYYVAPEVLGPEKYDKSCDMWS 248 (400)
T ss_pred HHHhcchhhccCChhheeeecCCCCcceEecccccccccCCCcc-------ccCCcccccccCHHHhCchhcCCCCCccc
Confidence 999999999999999999975 45799999999987653211 22346789999999998888888999999
Q ss_pred HHHHHHHHHHhh
Q 008643 335 IIPALEAIWQNS 346 (558)
Q Consensus 335 l~~~l~~l~~~~ 346 (558)
+|+++|-++.+|
T Consensus 249 lgVimYIlLCGy 260 (400)
T KOG0604|consen 249 LGVIMYILLCGY 260 (400)
T ss_pred hhHHHHHhhcCC
Confidence 999999998864
No 333
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.81 E-value=1.4e-19 Score=205.58 Aligned_cols=237 Identities=17% Similarity=0.204 Sum_probs=166.1
Q ss_pred cceeeeeeccEEEEEEEcCC-Cc----EEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhH
Q 008643 107 SQTIAAASLGQVYRATLRET-GE----DVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLL 181 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~-G~----~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~ 181 (558)
.+.||+|.||.||+|..... |. .||||..++... ..
T Consensus 697 ~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~---------------------------------------~~ 737 (1025)
T KOG1095|consen 697 LRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSS---------------------------------------EQ 737 (1025)
T ss_pred eeeeccccccceEEEEEecCCCCccceEEEEEeccccCC---------------------------------------HH
Confidence 36899999999999998532 32 388888766532 24
Q ss_pred hhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHh------cCCCCHHHH--HHHHHH
Q 008643 182 EELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIK------GAGIDVGGF--LTVGVS 253 (558)
Q Consensus 182 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~------~~~~~~~~~--~~~~v~ 253 (558)
++.+|.+||..+.+| .|.+.|..-.|..+ .+..++++|||+||+|..+.+.. ...+....+ +..+|+
T Consensus 738 ~~~~Fl~Ea~~m~~f----~HpNiv~liGv~l~-~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA 812 (1025)
T KOG1095|consen 738 EVSDFLKEALLMSKF----DHPNIVSLIGVCLD-SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVA 812 (1025)
T ss_pred HHHHHHHHHHHHhcC----CCcceeeEEEeecC-CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHh
Confidence 456788888876554 56667777777766 78889999999999998875544 334555554 557899
Q ss_pred HHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcc
Q 008643 254 AALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVS 333 (558)
Q Consensus 254 ~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~ 333 (558)
.|++||++++||||||-..|+|++....+||.||||++.+....-...-. - ..--..+|+||.+.-|..+.++|+|
T Consensus 813 ~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~--~--a~lPvkWm~PEsl~d~iFtskSDvW 888 (1025)
T KOG1095|consen 813 KGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYRKHG--E--AMLPVKWMPPESLKDGIFTSKSDVW 888 (1025)
T ss_pred hhhHHHHhCCCcCcchhhhheeecccCcEEEcccchhHhhhhchheeccC--c--cccceecCCHHHHhhcccccccchh
Confidence 99999999999999999999999999999999999999654432211000 0 0113568999999999999999999
Q ss_pred cHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCC
Q 008643 334 PIIPALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPD 398 (558)
Q Consensus 334 ~l~~~l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~ 398 (558)
+||+.++|+|+. ...|+.+.+-.+++.. .+....+.-|++....+-.++.. |++-+|+
T Consensus 889 sFGVllWEifsl-G~~PY~~~~n~~v~~~---~~~ggRL~~P~~CP~~ly~lM~~---CW~~~pe 946 (1025)
T KOG1095|consen 889 SFGVLLWEIFSL-GATPYPSRSNFEVLLD---VLEGGRLDPPSYCPEKLYQLMLQ---CWKHDPE 946 (1025)
T ss_pred hhHHHHHHHHhC-CCCCCCCcchHHHHHH---HHhCCccCCCCCCChHHHHHHHH---HccCChh
Confidence 999999999984 2334555544444332 23333333344333333344443 6666663
No 334
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.81 E-value=3.6e-20 Score=187.30 Aligned_cols=118 Identities=19% Similarity=0.122 Sum_probs=89.6
Q ss_pred CCceEEEEeeeCCCCCCCHHHHhcCCCCH--HHHHHHHHHHHHHHHHHCCceecCCCCCCEEEecCC-------CeEEee
Q 008643 216 SGSRVLVMEWIDGIRCTDPQAIKGAGIDV--GGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDG-------RIAYVD 286 (558)
Q Consensus 216 ~~~~vLvmE~i~G~~L~d~~~~~~~~~~~--~~~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg-------~l~liD 286 (558)
.+..++||||++|++|.+.........+. ...+..|++.++.|||+.|++|+|+||.||+++.+| .++++|
T Consensus 88 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d 167 (274)
T cd05076 88 GSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSD 167 (274)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecC
Confidence 45678999999999987654332223333 344678999999999999999999999999998654 489999
Q ss_pred cCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-CCCCCCCCcccHHHHHHHHH
Q 008643 287 FGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-GFLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 287 FGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-g~~~~~~Di~~l~~~l~~l~ 343 (558)
||.+........ ..++..|++|+.... ...++.+|+|++|..+++++
T Consensus 168 ~g~~~~~~~~~~----------~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~ 215 (274)
T cd05076 168 PGVSFTALSREE----------RVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEIC 215 (274)
T ss_pred Cccccccccccc----------cccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHH
Confidence 998765432211 124667889987764 45678899999999999986
No 335
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.80 E-value=2.5e-20 Score=193.30 Aligned_cols=225 Identities=17% Similarity=0.173 Sum_probs=162.3
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCC-ChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPG-IEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~-~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
..+|-|+||.|-....+.....+|+|+++.. +.+.-. .+.+..|-+.
T Consensus 426 aTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQ--------------------------------qeHv~sEr~I 473 (732)
T KOG0614|consen 426 ATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQ--------------------------------QEHVFSERNI 473 (732)
T ss_pred hhcccCccceEEEEEecccchHHHHHHHhHhhccchhH--------------------------------HHHHHhHHHH
Confidence 4789999999999988543334888877542 111000 0112222222
Q ss_pred HHH--HHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC-CCCHHHHHHHHHHHHHHHHHHCC
Q 008643 187 TLE--ARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA-GIDVGGFLTVGVSAALRQLLEFG 263 (558)
Q Consensus 187 ~~E--a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~-~~~~~~~~~~~v~~~L~~Lh~~G 263 (558)
..| .+.+++++..|+++..| |+.||-|=||.+..+..-+.. ..+..+++..++..++.|||++|
T Consensus 474 m~~~~s~fIvrLYrTfrd~kyv-------------YmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~ 540 (732)
T KOG0614|consen 474 MMECRSDFIVRLYRTFRDSKYV-------------YMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKG 540 (732)
T ss_pred HHhcCchHHHHHHHHhccchhh-------------hhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcC
Confidence 222 57899999999999888 999999999999876433322 34567889999999999999999
Q ss_pred ceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 008643 264 LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 264 i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~ 343 (558)
|+.||+||+|++++.+|.+||+|||+++.+....+. .++||+++|+||+++-..-.+..+|.|++|..+++++
T Consensus 541 iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KT-------wTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL 613 (732)
T KOG0614|consen 541 IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKT-------WTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELL 613 (732)
T ss_pred ceeccCChhheeeccCCceEEeehhhHHHhccCCce-------eeecCCcccccchhhhccCcchhhHHHHHHHHHHHHH
Confidence 999999999999999999999999999999876654 4568999999999988777788899999999999999
Q ss_pred HhhcCCCCCCCCHHHHHHHHHHHH--HhcCCCCchhHHHHHHHHH
Q 008643 344 QNSSGKGLADFNFRSVTGQFNKLV--YNYRIRIPERFSLVIRSLL 386 (558)
Q Consensus 344 ~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~lP~~~~~~~rsl~ 386 (558)
.+.. |++..+.-.....+.+-+ ..+|-+++.+...++|.|.
T Consensus 614 ~G~p--PFs~~dpmktYn~ILkGid~i~~Pr~I~k~a~~Lik~LC 656 (732)
T KOG0614|consen 614 TGSP--PFSGVDPMKTYNLILKGIDKIEFPRRITKTATDLIKKLC 656 (732)
T ss_pred cCCC--CCCCCchHHHHHHHHhhhhhhhcccccchhHHHHHHHHH
Confidence 8432 333322222222222222 2345556666666666553
No 336
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.80 E-value=5.6e-20 Score=185.88 Aligned_cols=185 Identities=19% Similarity=0.233 Sum_probs=128.0
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCCh-----hhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIE-----PIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLL 181 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~-----~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~ 181 (558)
.++||+|++|+||+|+.+.+|+.||||..+.... ..+..++.+++.+
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l---------------------------- 56 (284)
T cd07860 5 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL---------------------------- 56 (284)
T ss_pred eeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhc----------------------------
Confidence 3689999999999999988999999998764321 1122222222211
Q ss_pred hhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCH--HHHHHHHHHHHHHH
Q 008643 182 EELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDV--GGFLTVGVSAALRQ 258 (558)
Q Consensus 182 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~--~~~~~~~v~~~L~~ 258 (558)
.|+|+.++.+.+.+. ...+++|||+.+ ++.+...... ..++. ...+..+++.++.|
T Consensus 57 -------~h~~i~~~~~~~~~~-------------~~~~~v~e~~~~-~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~ 115 (284)
T cd07860 57 -------NHPNIVKLLDVIHTE-------------NKLYLVFEFLHQ-DLKKFMDASPLSGIPLPLIKSYLFQLLQGLAF 115 (284)
T ss_pred -------CCCCCcchhhhcccC-------------CcEEEEeecccc-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 156666666655443 334899999964 5544332211 22333 34467889999999
Q ss_pred HHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-CCCCCCCCcccHHH
Q 008643 259 LLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-GFLAKGTDVSPIIP 337 (558)
Q Consensus 259 Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-g~~~~~~Di~~l~~ 337 (558)
||..|++|+|++|+||+++.+|.++++|||++..+....... ....++..+++|+.... ...+..+|+|++|.
T Consensus 116 lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~ 189 (284)
T cd07860 116 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY------THEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 189 (284)
T ss_pred HHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCcccc------ccccccccccCCeEEecCCCCCcHHHHHHHHH
Confidence 999999999999999999999999999999987654322110 01123556788886543 33567799999999
Q ss_pred HHHHHHHhh
Q 008643 338 ALEAIWQNS 346 (558)
Q Consensus 338 ~l~~l~~~~ 346 (558)
.+++++++.
T Consensus 190 il~~l~tg~ 198 (284)
T cd07860 190 IFAEMVTRR 198 (284)
T ss_pred HHHHHHHCC
Confidence 999999854
No 337
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.80 E-value=4.8e-20 Score=184.83 Aligned_cols=238 Identities=22% Similarity=0.313 Sum_probs=152.6
Q ss_pred ceeeeeeccEEEEEEEc----CCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhh
Q 008643 108 QTIAAASLGQVYRATLR----ETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEE 183 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~----~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~E 183 (558)
+.||.|+||.||+|+++ ..+..|+||+..+.......
T Consensus 5 ~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~--------------------------------------- 45 (259)
T PF07714_consen 5 KQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEE--------------------------------------- 45 (259)
T ss_dssp EEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHH---------------------------------------
T ss_pred eEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccc---------------------------------------
Confidence 57999999999999996 34678999998764322110
Q ss_pred hcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHh-cCCCCHHH--HHHHHHHHHHHHHH
Q 008643 184 LDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIK-GAGIDVGG--FLTVGVSAALRQLL 260 (558)
Q Consensus 184 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~-~~~~~~~~--~~~~~v~~~L~~Lh 260 (558)
-++..|... ...+.+++-+.+-.++. .....+++|||+++++|.++.... ....+... .+..+++.||.|||
T Consensus 46 ~~~~~e~~~----l~~l~h~ni~~~~g~~~-~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh 120 (259)
T PF07714_consen 46 EEFLNEIQI----LRKLRHPNIVKLYGFCI-ENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLH 120 (259)
T ss_dssp HHHHHHHHH----HHTHSBTTBE-EEEEEE-SSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHH
T ss_pred eeeeecccc----ccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 011222222 22234444444444444 345579999999999998865544 23444443 36789999999999
Q ss_pred HCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHH
Q 008643 261 EFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALE 340 (558)
Q Consensus 261 ~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~ 340 (558)
+.+++|+|++|.||+++.++.+||+|||++.......... ..........+++|+....+..+..+|+|++|..++
T Consensus 121 ~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~----~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ 196 (259)
T PF07714_consen 121 SNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYK----NDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLY 196 (259)
T ss_dssp HTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEE----ESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccc----cccccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999998773211100 001123456788999999888899999999999999
Q ss_pred HHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 341 AIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 341 ~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
++++... .++.+.+...+...+. .......|..+..-+..++.. |+..||+-+
T Consensus 197 ei~~~~~-~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~li~~---C~~~~p~~R 249 (259)
T PF07714_consen 197 EILTLGK-FPFSDYDNEEIIEKLK---QGQRLPIPDNCPKDIYSLIQQ---CWSHDPEKR 249 (259)
T ss_dssp HHHTTSS-GTTTTSCHHHHHHHHH---TTEETTSBTTSBHHHHHHHHH---HT-SSGGGS
T ss_pred ccccccc-cccccccccccccccc---ccccceeccchhHHHHHHHHH---HcCCChhhC
Confidence 9998421 2445555555444432 222233344444444455544 666777543
No 338
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.80 E-value=3e-19 Score=179.93 Aligned_cols=184 Identities=20% Similarity=0.246 Sum_probs=132.0
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChh-----hHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHh
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEP-----IIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLE 182 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~-----~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~ 182 (558)
+.||.|++|.||+|....+|+.|++|..+..... .+..++.+++.
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~------------------------------ 54 (283)
T cd05118 5 GKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKE------------------------------ 54 (283)
T ss_pred eeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHH------------------------------
Confidence 5799999999999999889999999987654322 11111111111
Q ss_pred hhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCC--HHHHHHHHHHHHHHHHH
Q 008643 183 ELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGID--VGGFLTVGVSAALRQLL 260 (558)
Q Consensus 183 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~--~~~~~~~~v~~~L~~Lh 260 (558)
+ .|+|+.++.+.+.+. ...+++|||+++ ++.+.........+ ....+..+++.++.+||
T Consensus 55 -l----~~~~i~~~~~~~~~~-------------~~~~~v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH 115 (283)
T cd05118 55 -L----NHPNIIKLLDVFRHK-------------GDLYLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCH 115 (283)
T ss_pred -h----cCCCcchHHHhhccC-------------CCEEEEEeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHH
Confidence 1 155666666655443 344899999986 55544332222333 33457789999999999
Q ss_pred HCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcccHHHHH
Q 008643 261 EFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLG-FLAKGTDVSPIIPAL 339 (558)
Q Consensus 261 ~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g-~~~~~~Di~~l~~~l 339 (558)
..|++|+|+||.||+++.++.++++|||.+..+....+.. ....++..+++|+....+ ..+..+|+|++|..+
T Consensus 116 ~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~------~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l 189 (283)
T cd05118 116 SHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPY------THYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIF 189 (283)
T ss_pred HCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccc------cCccCcccccCcHHHhcCCCCCchhHHHHHHHHH
Confidence 9999999999999999999999999999998776543110 111245667888887765 677889999999999
Q ss_pred HHHHHhh
Q 008643 340 EAIWQNS 346 (558)
Q Consensus 340 ~~l~~~~ 346 (558)
++++++.
T Consensus 190 ~~l~tg~ 196 (283)
T cd05118 190 AELLSRR 196 (283)
T ss_pred HHHHhCC
Confidence 9999853
No 339
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.80 E-value=1.1e-19 Score=182.46 Aligned_cols=188 Identities=14% Similarity=0.074 Sum_probs=124.3
Q ss_pred eeeeeeccEEEEEEEc--CCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 109 TIAAASLGQVYRATLR--ETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 109 pIg~Gs~GqVy~a~~~--~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.||+|+||.||+|... .++..+|+|..+...... .+.++
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~---------------------------------------~~~~~ 42 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQ---------------------------------------EQMKF 42 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChH---------------------------------------HHHHH
Confidence 5899999999999863 245679999876542110 01112
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC----CCCH--HHHHHHHHHHHHHHHH
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA----GIDV--GGFLTVGVSAALRQLL 260 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~----~~~~--~~~~~~~v~~~L~~Lh 260 (558)
.+|.. +...+.+.+.+.+...+ ......+++|||++|++|.++...... ..+. ...+..|++.++.|||
T Consensus 43 ~~E~~----~l~~l~h~~iv~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH 117 (269)
T cd05087 43 LEEAQ----PYRSLQHSNLLQCLGQC-TEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH 117 (269)
T ss_pred HHHHH----HHHhCCCCCEeeEEEEE-cCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH
Confidence 22222 22233333333332222 224556899999999999876533221 1222 2346778999999999
Q ss_pred HCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC-------CCCCCCCcc
Q 008643 261 EFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLG-------FLAKGTDVS 333 (558)
Q Consensus 261 ~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g-------~~~~~~Di~ 333 (558)
+.|++|+|+||.||+++.++.++++|||++........... .....+...|++|++.... ..+..+|+|
T Consensus 118 ~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Diw 193 (269)
T cd05087 118 KNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVT----PDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVW 193 (269)
T ss_pred HCCEeccccCcceEEEcCCCcEEECCccccccccCcceeec----CCCcCCcccccCHhHhccccccccccCCCccchhH
Confidence 99999999999999999999999999999865433211100 0112345678899987632 236789999
Q ss_pred cHHHHHHHHHH
Q 008643 334 PIIPALEAIWQ 344 (558)
Q Consensus 334 ~l~~~l~~l~~ 344 (558)
++|..++++++
T Consensus 194 slG~~l~el~~ 204 (269)
T cd05087 194 SLGVTIWELFE 204 (269)
T ss_pred HHHHHHHHHHh
Confidence 99999999985
No 340
>smart00090 RIO RIO-like kinase.
Probab=99.80 E-value=7.5e-19 Score=174.50 Aligned_cols=188 Identities=27% Similarity=0.350 Sum_probs=128.1
Q ss_pred ceeeeeeccEEEEEE-EcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhc-cCCChHHHHHHHHHhhHhhhc
Q 008643 108 QTIAAASLGQVYRAT-LRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQK-LGCNAELIVDEFGEKLLEELD 185 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~-~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~-~~~~~~~iv~e~~~~l~~Eld 185 (558)
++||+|++|+||+|+ ...+|+.||||+.+++.......+. +........ ...++...+ +..
T Consensus 34 ~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~---------~~~ 96 (237)
T smart00090 34 GCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDR--------YVDGDFRFKYRKINPRKLV---------RLW 96 (237)
T ss_pred CeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhh--------hcccchhhccCCCCHHHHH---------HHH
Confidence 689999999999999 5579999999999876432110000 000000000 000111111 122
Q ss_pred HHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCH--HHHHHHHHHHHHHHHHHCC
Q 008643 186 YTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDV--GGFLTVGVSAALRQLLEFG 263 (558)
Q Consensus 186 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~--~~~~~~~v~~~L~~Lh~~G 263 (558)
+..|++++.++.. ..+.+|.++.. +..++||||++|.++.... ......+. ...+..+++.++.++|..|
T Consensus 97 ~~~E~~~L~~L~~-----~~i~~p~~~~~--~~~~lV~E~~~g~~L~~~~-~~~~~~~~~~~~~i~~qi~~~l~~LH~~g 168 (237)
T smart00090 97 AEKEFRNLQRLYE-----AGVPVPKPIAW--RRNVLVMEFIGGDGLPAPR-LKDVEPEEEEEFELYDDILEEMRKLYKEG 168 (237)
T ss_pred HHHHHHHHHHHHh-----cCCCCCeeeEe--cCceEEEEEecCCcccccc-cccCCcchHHHHHHHHHHHHHHHHHHhcC
Confidence 4678888888854 25667887753 4569999999998876532 11222222 2356789999999999999
Q ss_pred -ceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCC
Q 008643 264 -LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAK 328 (558)
Q Consensus 264 -i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~ 328 (558)
++|+|+||+||+++ +++++++|||++......... .+..+|...+...+.+.|..+.
T Consensus 169 ~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~~~~~~~-------~~~~~d~~~~~~~~~~~~~~~~ 226 (237)
T smart00090 169 ELVHGDLSEYNILVH-DGKVVIIDVSQSVELDHPMAL-------EFLERDIRNIIRFFRRKGVDEL 226 (237)
T ss_pred CEEeCCCChhhEEEE-CCCEEEEEChhhhccCCcchH-------HHHHHHHHHHHHHHHHcCCCcC
Confidence 99999999999999 899999999999987765533 3456888888888888877544
No 341
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.80 E-value=1.6e-19 Score=187.84 Aligned_cols=192 Identities=14% Similarity=0.134 Sum_probs=129.4
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChh-----hHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEP-----IIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLL 181 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~-----~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~ 181 (558)
.+.||.|++|.||+|+.+.+|+.||+|+....... .+..++.++
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l------------------------------- 58 (334)
T cd07855 10 IENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKIL------------------------------- 58 (334)
T ss_pred eeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHH-------------------------------
Confidence 46899999999999999889999999987643211 111111111
Q ss_pred hhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHH
Q 008643 182 EELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLL 260 (558)
Q Consensus 182 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh 260 (558)
..+ .|+|+.++.+.+..... .....+++|||+.| ++.+...... ...+....+..+++.+|.+||
T Consensus 59 ~~l----~h~~iv~~~~~~~~~~~---------~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH 124 (334)
T cd07855 59 RHF----KHDNIIAIRDILRPPGA---------DFKDVYVVMDLMES-DLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIH 124 (334)
T ss_pred Hhc----CCCCccCHHHhccccCC---------CCceEEEEEehhhh-hHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 111 15666666655543221 12345899999975 5544322111 122334457789999999999
Q ss_pred HCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-CCCCCCCCcccHHHHH
Q 008643 261 EFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-GFLAKGTDVSPIIPAL 339 (558)
Q Consensus 261 ~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-g~~~~~~Di~~l~~~l 339 (558)
..|++|+|+||+||+++.+|.++++|||++..+....... ........++..|++|+.... +..+..+|+|++|+.+
T Consensus 125 ~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l 202 (334)
T cd07855 125 SANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEH--KYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIF 202 (334)
T ss_pred HCCeecCCCCHHHEEEcCCCcEEecccccceeecccCcCC--CcccccccccccccChHHhcCCcccccccchHHHHHHH
Confidence 9999999999999999999999999999987664322110 000011134566788887654 4577889999999999
Q ss_pred HHHHHh
Q 008643 340 EAIWQN 345 (558)
Q Consensus 340 ~~l~~~ 345 (558)
++++.+
T Consensus 203 ~el~~g 208 (334)
T cd07855 203 AEMLGR 208 (334)
T ss_pred HHHHcC
Confidence 999864
No 342
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.80 E-value=1.4e-20 Score=181.94 Aligned_cols=209 Identities=21% Similarity=0.240 Sum_probs=147.9
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
..||.|+||.|++-.++++|+..|||.+|-...+ .| .++++.|+|..
T Consensus 70 g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~---ke------------------------------q~rll~e~d~~ 116 (361)
T KOG1006|consen 70 GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIE---KE------------------------------QKRLLMEHDTV 116 (361)
T ss_pred HHhcCCcchhhhhhhcCccCcEEEEEEeeeccch---HH------------------------------HHHHHHHHHHH
Confidence 5799999999999999999999999998865431 11 12344455543
Q ss_pred H---HHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHH----HhcCCCCHHHH--HHHHHHHHHHH
Q 008643 188 L---EARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQA----IKGAGIDVGGF--LTVGVSAALRQ 258 (558)
Q Consensus 188 ~---Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~----~~~~~~~~~~~--~~~~v~~~L~~ 258 (558)
. +.+|+++|++.+-.+... |+.||.++ .+++.+.. ..+..++..-+ +......||.|
T Consensus 117 mks~~cp~IVkfyGa~F~EGdc-------------WiCMELMd-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~y 182 (361)
T KOG1006|consen 117 MKSSNCPNIVKFYGALFSEGDC-------------WICMELMD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDY 182 (361)
T ss_pred HhhcCCcHHHHHhhhhhcCCce-------------eeeHHHHh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHH
Confidence 2 468999999877665444 99999997 45543221 22223333222 33345688999
Q ss_pred HH-HCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC-C-CCCCCCcccH
Q 008643 259 LL-EFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLG-F-LAKGTDVSPI 335 (558)
Q Consensus 259 Lh-~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g-~-~~~~~Di~~l 335 (558)
|- +..++|||+||+|||++..|.+|+||||+++++.+....+ .-.|--.||||+-+.-. - +.-.+|+|++
T Consensus 183 LK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT-------~daGCrpYmAPERi~p~~~gyDiRSDvWSL 255 (361)
T KOG1006|consen 183 LKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKT-------VDAGCRPYMAPERIDPSDKGYDIRSDVWSL 255 (361)
T ss_pred HHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhh-------hccCCccccChhccCCccCCcchhhhhhhh
Confidence 97 5689999999999999999999999999999886543221 12366788999887642 2 4456899999
Q ss_pred HHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCC
Q 008643 336 IPALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRI 374 (558)
Q Consensus 336 ~~~l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l 374 (558)
|.+|+++-++.+ |.. .+..+++++..++...|..+
T Consensus 256 GITL~EvAtG~f--Pyr--~w~svfeql~~Vv~gdpp~l 290 (361)
T KOG1006|consen 256 GITLYEVATGNF--PYR--KWDSVFEQLCQVVIGDPPIL 290 (361)
T ss_pred cceEeeeecCCC--Ccc--hHHHHHHHHHHHHcCCCCee
Confidence 999999987533 333 34568888888888776554
No 343
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.80 E-value=1.1e-19 Score=182.88 Aligned_cols=188 Identities=11% Similarity=0.105 Sum_probs=125.0
Q ss_pred ceeeeeeccEEEEEEEcC-----CCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHh
Q 008643 108 QTIAAASLGQVYRATLRE-----TGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLE 182 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~-----~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~ 182 (558)
+.||.|+||.||+|+.+. +...|++|+.......... ..
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~---------------------------------~~--- 54 (275)
T cd05046 11 TTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQ---------------------------------SE--- 54 (275)
T ss_pred eeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHH---------------------------------HH---
Confidence 679999999999999753 3467999976432111000 01
Q ss_pred hhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC--------CCC--HHHHHHHHH
Q 008643 183 ELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA--------GID--VGGFLTVGV 252 (558)
Q Consensus 183 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~--------~~~--~~~~~~~~v 252 (558)
+.+|.. +...+.+.+.+.+...+ ......+++|||++|++|.+....... ..+ ....+..++
T Consensus 55 ---~~~E~~----~l~~l~h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l 126 (275)
T cd05046 55 ---FRRELD----MFRKLSHKNVVRLLGLC-REAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQI 126 (275)
T ss_pred ---HHHHHH----HHHhcCCcceeeeEEEE-CCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHH
Confidence 111222 22222232222222222 223456999999999999876543221 122 234567899
Q ss_pred HHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCc
Q 008643 253 SAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDV 332 (558)
Q Consensus 253 ~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di 332 (558)
+.++.|||+.|++|+|+||.||+++.++.+++.|||++........... ....+...|++|+....+...+.+|+
T Consensus 127 ~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~y~~PE~~~~~~~~~~~Di 201 (275)
T cd05046 127 ALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKL-----RNALIPLRWLAPEAVQEDDFSTKSDV 201 (275)
T ss_pred HHHHHHhhhcCcccCcCccceEEEeCCCcEEEcccccccccCccccccc-----CCceeEEeecChhhhccCCCCchhhH
Confidence 9999999999999999999999999999999999999865432211100 00112345888998887778888999
Q ss_pred ccHHHHHHHHHH
Q 008643 333 SPIIPALEAIWQ 344 (558)
Q Consensus 333 ~~l~~~l~~l~~ 344 (558)
|++|..+++++.
T Consensus 202 ~slG~~l~~l~~ 213 (275)
T cd05046 202 WSFGVLMWEVFT 213 (275)
T ss_pred HHHHHHHHHHHh
Confidence 999999999986
No 344
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.80 E-value=3e-19 Score=182.26 Aligned_cols=189 Identities=22% Similarity=0.233 Sum_probs=129.7
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|++|.||+|....+|+.||||+.+......... .+++.+.. +..
T Consensus 20 ~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~--~~~~e~~~------------------------~~~---- 69 (296)
T cd06618 20 LGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENK--RILMDLDV------------------------VLK---- 69 (296)
T ss_pred eeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHH--HHHHHHHH------------------------HHh----
Confidence 578999999999999997779999999986432111000 00111000 000
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHHHHHHHHHHHH-CC
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVGVSAALRQLLE-FG 263 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~v~~~L~~Lh~-~G 263 (558)
...|+|+.++.+.+.... ..+++|||+.+ .+.++........+.. ..+..+++.++.|||+ .|
T Consensus 70 ~~~~~~i~~~~~~~~~~~-------------~~~~v~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ 135 (296)
T cd06618 70 SHDCPYIVKCYGYFITDS-------------DVFICMELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHG 135 (296)
T ss_pred ccCCCchHhhheeeecCC-------------eEEEEeeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCC
Confidence 112567777766655443 34899999865 4444332222233333 3477889999999997 69
Q ss_pred ceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCC----CCCCCCcccHHHHH
Q 008643 264 LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGF----LAKGTDVSPIIPAL 339 (558)
Q Consensus 264 i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~----~~~~~Di~~l~~~l 339 (558)
++|+|++|.||+++.++.++|+|||++..+....... ...++..+++|+.+.... .+..+|+|++|..+
T Consensus 136 i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il 208 (296)
T cd06618 136 VIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKT-------RSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISL 208 (296)
T ss_pred EecCCCcHHHEEEcCCCCEEECccccchhccCCCccc-------CCCCCccccCHhhcCCCCCccccccchhHHHHHHHH
Confidence 9999999999999999999999999988765432211 113566788999886443 67789999999999
Q ss_pred HHHHHhh
Q 008643 340 EAIWQNS 346 (558)
Q Consensus 340 ~~l~~~~ 346 (558)
++++.+.
T Consensus 209 ~el~~g~ 215 (296)
T cd06618 209 VELATGQ 215 (296)
T ss_pred HHHHhCC
Confidence 9999743
No 345
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.80 E-value=6.7e-20 Score=186.47 Aligned_cols=190 Identities=17% Similarity=0.141 Sum_probs=128.6
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||.|++|.||+|..+.+|+.||||..+...... .+....
T Consensus 10 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--------------------------------~~~~~~------ 51 (293)
T cd07843 10 LNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKE--------------------------------GFPITS------ 51 (293)
T ss_pred hhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccc--------------------------------cchhhH------
Confidence 378999999999999998889999999876432110 000011
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeec-CCCceEEEEeeeCCCCCCCHHHHhcCCCCH--HHHHHHHHHHHHHHHHHCC
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKR-LSGSRVLVMEWIDGIRCTDPQAIKGAGIDV--GGFLTVGVSAALRQLLEFG 263 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~-~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~--~~~~~~~v~~~L~~Lh~~G 263 (558)
.+|...+. .+.+.+.+.+...+.. .....+++|||+++ +|.+.........+. ...+..+++.+|.|||+.|
T Consensus 52 ~~e~~~l~----~l~h~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ 126 (293)
T cd07843 52 LREINILL----KLQHPNIVTVKEVVVGSNLDKIYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNW 126 (293)
T ss_pred HHHHHHHH----hcCCCCEEEEEEEEEecCCCcEEEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 11222222 2233333333322221 12678999999986 665543332222333 3457789999999999999
Q ss_pred ceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcccHHHHHHHH
Q 008643 264 LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLG-FLAKGTDVSPIIPALEAI 342 (558)
Q Consensus 264 i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g-~~~~~~Di~~l~~~l~~l 342 (558)
++|+|++|+||+++.+|.++++|||++..+....... ....++..+++|+..... ..+..+|+|++|..++++
T Consensus 127 i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~------~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l 200 (293)
T cd07843 127 ILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPY------TQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAEL 200 (293)
T ss_pred eeeccCCHHHEEECCCCcEEEeecCceeeccCCcccc------ccccccccccCchhhcCCccccchhhHHHHHHHHHHH
Confidence 9999999999999999999999999988775532111 111245678888887643 356789999999999999
Q ss_pred HHh
Q 008643 343 WQN 345 (558)
Q Consensus 343 ~~~ 345 (558)
+.+
T Consensus 201 ~~g 203 (293)
T cd07843 201 LTK 203 (293)
T ss_pred HhC
Confidence 974
No 346
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.80 E-value=1.1e-19 Score=183.58 Aligned_cols=185 Identities=18% Similarity=0.219 Sum_probs=124.8
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChh----hHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHh
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEP----IIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLE 182 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~----~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~ 182 (558)
.+.||.|++|+||+|+.+.+|+.||||+.+..... .+..++.+++.
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~------------------------------ 54 (284)
T cd07836 5 LEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKE------------------------------ 54 (284)
T ss_pred eeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHh------------------------------
Confidence 36899999999999999889999999988654211 11111111110
Q ss_pred hhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc--CCCCH--HHHHHHHHHHHHHH
Q 008643 183 ELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG--AGIDV--GGFLTVGVSAALRQ 258 (558)
Q Consensus 183 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~--~~~~~--~~~~~~~v~~~L~~ 258 (558)
+ .|+|+.++.+.+ ......+++|||++| ++.+...... ..++. ...+..+++.++.+
T Consensus 55 -l----~h~~i~~~~~~~-------------~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~ 115 (284)
T cd07836 55 -L----KHENIVRLHDVI-------------HTENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAF 115 (284)
T ss_pred -h----cCCCEeeeeeeE-------------eeCCcEEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHH
Confidence 0 123332222222 224556999999986 5544432221 12333 34467899999999
Q ss_pred HHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcccHHH
Q 008643 259 LLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLG-FLAKGTDVSPIIP 337 (558)
Q Consensus 259 Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g-~~~~~~Di~~l~~ 337 (558)
||+.|++|+|+||+||+++.+|.++++|||++..+....... ....++..|++|+....+ ..+..+|+|++|.
T Consensus 116 lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~------~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~ 189 (284)
T cd07836 116 CHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTF------SNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGC 189 (284)
T ss_pred HHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcccc------ccccccccccChHHhcCCCCCCcHHHHHHHHH
Confidence 999999999999999999999999999999987654322110 001235668888876543 3567799999999
Q ss_pred HHHHHHHhh
Q 008643 338 ALEAIWQNS 346 (558)
Q Consensus 338 ~l~~l~~~~ 346 (558)
.+++++++.
T Consensus 190 ~l~~l~~g~ 198 (284)
T cd07836 190 IMAEMITGR 198 (284)
T ss_pred HHHHHHhCC
Confidence 999999853
No 347
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.80 E-value=1.6e-19 Score=183.63 Aligned_cols=190 Identities=18% Similarity=0.191 Sum_probs=123.5
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChh-----hHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEP-----IIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLL 181 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~-----~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~ 181 (558)
.+.||.|++|.||+|+.+.+|+.||||+.+..... .+..++.+++.+
T Consensus 6 ~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l---------------------------- 57 (295)
T cd07837 6 LEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQML---------------------------- 57 (295)
T ss_pred eeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHc----------------------------
Confidence 36799999999999999889999999987543211 111111111111
Q ss_pred hhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc----CCCC--HHHHHHHHHHHH
Q 008643 182 EELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG----AGID--VGGFLTVGVSAA 255 (558)
Q Consensus 182 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~----~~~~--~~~~~~~~v~~~ 255 (558)
..|+|+.++...+..... .-....+++|||++| ++.+...... ...+ ....+..+++.+
T Consensus 58 ------~~~~~i~~~~~~~~~~~~--------~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~ 122 (295)
T cd07837 58 ------SESIYIVRLLDVEHVEEK--------NGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKG 122 (295)
T ss_pred ------cCCCCccceeeeEeecCC--------CCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHH
Confidence 012333333222211110 001125899999997 5655432211 1123 334467899999
Q ss_pred HHHHHHCCceecCCCCCCEEEec-CCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-CCCCCCCCcc
Q 008643 256 LRQLLEFGLFHGDPHPGNIFAMR-DGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-GFLAKGTDVS 333 (558)
Q Consensus 256 L~~Lh~~Gi~H~DlhPgNIlv~~-dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-g~~~~~~Di~ 333 (558)
|.|||..|++|+|+||+||+++. ++.++++|||++..+......... ..+++.+++|+.... ...+..+|+|
T Consensus 123 L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~~~~~------~~~~~~~~aPE~~~~~~~~~~~~Di~ 196 (295)
T cd07837 123 VAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSYTH------EIVTLWYRAPEVLLGSTHYSTPVDIW 196 (295)
T ss_pred HHHHHHCCeeecCCChHHEEEecCCCeEEEeecccceecCCCccccCC------cccccCCCChHHhhCCCCCCchHHHH
Confidence 99999999999999999999998 899999999998766432111000 013556788887754 3457889999
Q ss_pred cHHHHHHHHHHh
Q 008643 334 PIIPALEAIWQN 345 (558)
Q Consensus 334 ~l~~~l~~l~~~ 345 (558)
++|..+++++++
T Consensus 197 slG~~l~~l~~g 208 (295)
T cd07837 197 SVGCIFAEMSRK 208 (295)
T ss_pred HHHHHHHHHHcC
Confidence 999999999874
No 348
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.79 E-value=1.1e-19 Score=185.88 Aligned_cols=197 Identities=18% Similarity=0.197 Sum_probs=126.0
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChh-----hHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEP-----IIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLL 181 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~-----~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~ 181 (558)
.+.||.|++|.||+|+.+.+|+.||||+....... ....++.+++.+
T Consensus 17 ~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l---------------------------- 68 (310)
T cd07865 17 LAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLL---------------------------- 68 (310)
T ss_pred EEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhC----------------------------
Confidence 47899999999999999889999999986532111 011111111111
Q ss_pred hhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCC--HHHHHHHHHHHHHHHH
Q 008643 182 EELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGID--VGGFLTVGVSAALRQL 259 (558)
Q Consensus 182 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~--~~~~~~~~v~~~L~~L 259 (558)
.|+|+.++.+.+..... .+....+..+++|||+.+ ++.+.........+ ....+..|++.++.||
T Consensus 69 -------~h~~iv~~~~~~~~~~~-----~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~l 135 (310)
T cd07865 69 -------KHENVVNLIEICRTKAT-----PYNRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYI 135 (310)
T ss_pred -------CCCCccceEEEEecccc-----cccCCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH
Confidence 13333333222111100 011223456999999976 44333222211233 3345778999999999
Q ss_pred HHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCC-CCCCCCcccHHHH
Q 008643 260 LEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGF-LAKGTDVSPIIPA 338 (558)
Q Consensus 260 h~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~-~~~~~Di~~l~~~ 338 (558)
|++|++|+|+||+||+++.+|.++++|||++..+....... .. ......+...|++|+....+. .++.+|+|++|..
T Consensus 136 H~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~-~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~ 213 (310)
T cd07865 136 HRNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSK-PN-RYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCI 213 (310)
T ss_pred HHCCeeccCCCHHHEEECCCCcEEECcCCCcccccCCcccC-CC-CccCcccCccccCcHHhcCCcccCchhhhHHHHHH
Confidence 99999999999999999999999999999998765432110 00 000112456688999876443 5678999999999
Q ss_pred HHHHHHhh
Q 008643 339 LEAIWQNS 346 (558)
Q Consensus 339 l~~l~~~~ 346 (558)
+++++++.
T Consensus 214 l~el~t~~ 221 (310)
T cd07865 214 MAEMWTRS 221 (310)
T ss_pred HHHHHhCC
Confidence 99999753
No 349
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.79 E-value=2.2e-19 Score=183.20 Aligned_cols=196 Identities=20% Similarity=0.194 Sum_probs=127.7
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChh-----hHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEP-----IIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLL 181 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~-----~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~ 181 (558)
.+.||+|++|+||+|+.+.+|+.||||+.+..... ....++.+++.+
T Consensus 12 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l---------------------------- 63 (302)
T cd07864 12 IGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQL---------------------------- 63 (302)
T ss_pred eeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhC----------------------------
Confidence 46899999999999999888999999988654211 111122111111
Q ss_pred hhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCC--HHHHHHHHHHHHHHHH
Q 008643 182 EELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGID--VGGFLTVGVSAALRQL 259 (558)
Q Consensus 182 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~--~~~~~~~~v~~~L~~L 259 (558)
.|+|+.++.+.+..... +..+.+..+..+++|||++| .+.+.........+ ....+..+++.+|.||
T Consensus 64 -------~h~~i~~~~~~~~~~~~---~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L 132 (302)
T cd07864 64 -------NHRNIVNLKEIVTDKQD---ALDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYC 132 (302)
T ss_pred -------CCCCeeeeeheecCcch---hhhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 14444444433322210 00011112356899999987 33332211111233 3345778999999999
Q ss_pred HHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-CCCCCCCCcccHHHH
Q 008643 260 LEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-GFLAKGTDVSPIIPA 338 (558)
Q Consensus 260 h~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-g~~~~~~Di~~l~~~ 338 (558)
|+.|++|+|+||+||+++.++.++++|||.+..+........ .....+..|++|+.... ...++.+|+|++|+.
T Consensus 133 H~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~-----~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~ 207 (302)
T cd07864 133 HKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPY-----TNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 207 (302)
T ss_pred HhCCeecCCCCHHHEEECCCCcEEeCcccccccccCCccccc-----ccceeccCccChHHhcCCCCCCchhHHHHHHHH
Confidence 999999999999999999999999999999987654321100 00113456788887754 345778999999999
Q ss_pred HHHHHHhh
Q 008643 339 LEAIWQNS 346 (558)
Q Consensus 339 l~~l~~~~ 346 (558)
+++++.+.
T Consensus 208 ~~el~~g~ 215 (302)
T cd07864 208 LGELFTKK 215 (302)
T ss_pred HHHHHhCC
Confidence 99999753
No 350
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.79 E-value=6.2e-19 Score=175.91 Aligned_cols=192 Identities=15% Similarity=0.119 Sum_probs=131.7
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|++|.||+|+...++..+++|+.+..........- ......|. .+...+
T Consensus 5 ~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~e~--~~l~~l-- 59 (260)
T cd08222 5 QQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNE---------------------TVQANQEA--QLLSKL-- 59 (260)
T ss_pred eeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcch---------------------HHHHHHHH--HHHHhC--
Confidence 36899999999999999777788888886542211000000 00000000 111111
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHH---hcCCCCH--HHHHHHHHHHHHHHHHH
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAI---KGAGIDV--GGFLTVGVSAALRQLLE 261 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~---~~~~~~~--~~~~~~~v~~~L~~Lh~ 261 (558)
.|+|+.++...+.+... .+++|||++|++|.+.... .....+. ...+..+++.++.+||+
T Consensus 60 --~h~~i~~~~~~~~~~~~-------------~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~ 124 (260)
T cd08222 60 --DHPAIVKFHASFLERDA-------------FCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQ 124 (260)
T ss_pred --CCCcHHHHHHHHhcCCc-------------eEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH
Confidence 27788888877655433 3899999999998765432 1112333 34567889999999999
Q ss_pred CCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHH
Q 008643 262 FGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEA 341 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~ 341 (558)
.|++|+|++|.||+++ ++.++++|||.+..+...... .....++..+++|+.......+..+|+|++|..+++
T Consensus 125 ~~i~h~~l~~~nili~-~~~~~l~d~g~~~~~~~~~~~------~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~ 197 (260)
T cd08222 125 RRILHRDLKAKNIFLK-NNLLKIGDFGVSRLLMGSCDL------ATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYE 197 (260)
T ss_pred cCccccCCChhheEee-cCCEeecccCceeecCCCccc------ccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHH
Confidence 9999999999999996 577999999998766432211 112345677889998876667778999999999999
Q ss_pred HHHh
Q 008643 342 IWQN 345 (558)
Q Consensus 342 l~~~ 345 (558)
++..
T Consensus 198 l~~~ 201 (260)
T cd08222 198 MCCL 201 (260)
T ss_pred HHhC
Confidence 9874
No 351
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.79 E-value=1.5e-19 Score=183.91 Aligned_cols=189 Identities=16% Similarity=0.146 Sum_probs=122.9
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||.|++|.||+|+.+.+|+.||||..+...... +.... +
T Consensus 7 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~--------------------------------~~~~~------~ 48 (294)
T PLN00009 7 VEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDE--------------------------------GVPST------A 48 (294)
T ss_pred EEEecCCCCEEEEEEEecCCCcEEEEEehhhccccc--------------------------------cchHH------H
Confidence 468999999999999998899999999865321100 00000 1
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHH--HHHHHHHHHHHHHHHHCC
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVG--GFLTVGVSAALRQLLEFG 263 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~--~~~~~~v~~~L~~Lh~~G 263 (558)
.+|.. ....+.+.+.+.+...+ ......++||||+++ .+.+...... ...+.. ..+..+++.+|.+||+.|
T Consensus 49 ~~e~~----~l~~l~h~~i~~~~~~~-~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ 122 (294)
T PLN00009 49 IREIS----LLKEMQHGNIVRLQDVV-HSEKRLYLVFEYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHR 122 (294)
T ss_pred HHHHH----HHHhccCCCEeeEEEEE-ecCCeEEEEEecccc-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 11222 22222333323222222 234567999999975 5543321111 112222 346678999999999999
Q ss_pred ceecCCCCCCEEEec-CCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-CCCCCCCCcccHHHHHHH
Q 008643 264 LFHGDPHPGNIFAMR-DGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-GFLAKGTDVSPIIPALEA 341 (558)
Q Consensus 264 i~H~DlhPgNIlv~~-dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-g~~~~~~Di~~l~~~l~~ 341 (558)
++|+|++|.||+++. ++.++++|||++..+....... ....++..|++|+.... ...+..+|+|++|..+++
T Consensus 123 i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~ 196 (294)
T PLN00009 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTF------THEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAE 196 (294)
T ss_pred eeCCCCCcceEEEECCCCEEEEcccccccccCCCcccc------ccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHH
Confidence 999999999999985 4679999999997654321110 00123567888998765 346778999999999999
Q ss_pred HHHh
Q 008643 342 IWQN 345 (558)
Q Consensus 342 l~~~ 345 (558)
++++
T Consensus 197 l~tg 200 (294)
T PLN00009 197 MVNQ 200 (294)
T ss_pred HHhC
Confidence 9985
No 352
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.79 E-value=2.4e-19 Score=186.69 Aligned_cols=195 Identities=16% Similarity=0.145 Sum_probs=128.0
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|++|.||+|+.+.+|+.||||+..+.-..... ..+.+|+..
T Consensus 10 ~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~---------------------------------~~~~~E~~~ 56 (336)
T cd07849 10 LSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFC---------------------------------QRTLREIKI 56 (336)
T ss_pred EEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhH---------------------------------HHHHHHHHH
Confidence 47899999999999999889999999987653211100 011112111
Q ss_pred HH--HHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHCCc
Q 008643 187 TL--EARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 187 ~~--Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi 264 (558)
.. .|+|+.++.+.+..... ......+++|||+++ ++.+.........+....+..|++.+|.+||+.|+
T Consensus 57 l~~l~h~niv~~~~~~~~~~~--------~~~~~~~lv~e~~~~-~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~i 127 (336)
T cd07849 57 LRRFKHENIIGILDIIRPPSF--------ESFNDVYIVQELMET-DLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSANV 127 (336)
T ss_pred HHhCCCCCcCchhheeecccc--------cccceEEEEehhccc-CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 11 14555555443322110 112345899999976 44332211112223334577899999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-CCCCCCCCcccHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-GFLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-g~~~~~~Di~~l~~~l~~l~ 343 (558)
+|+|+||.||+++.+|.++++|||++..........- ......++..|+||+.... ...+..+|+|++|..+++++
T Consensus 128 vH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~ 204 (336)
T cd07849 128 LHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTG---FLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEML 204 (336)
T ss_pred eccCCCHHHEEECCCCCEEECcccceeeccccccccC---CcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999876643221100 0011234667889987643 45677899999999999999
Q ss_pred Hhh
Q 008643 344 QNS 346 (558)
Q Consensus 344 ~~~ 346 (558)
.+.
T Consensus 205 ~G~ 207 (336)
T cd07849 205 SNR 207 (336)
T ss_pred hCC
Confidence 853
No 353
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.79 E-value=3.5e-20 Score=169.86 Aligned_cols=202 Identities=19% Similarity=0.258 Sum_probs=137.6
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecC-----CChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHh
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRP-----GIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLE 182 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp-----~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~ 182 (558)
+.||+|.||.|++|+.+.+++.||+|..|- ++.....+++-+++.+.
T Consensus 8 ekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelk---------------------------- 59 (292)
T KOG0662|consen 8 EKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK---------------------------- 59 (292)
T ss_pred HhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhh----------------------------
Confidence 679999999999999999999999998773 34444444544444332
Q ss_pred hhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHHHHHHHHHHH
Q 008643 183 ELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVGVSAALRQLL 260 (558)
Q Consensus 183 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~v~~~L~~Lh 260 (558)
|+|+++++..+..+..+ .||.|||+. .|..+-..-...+++. +.+..|++.|+.++|
T Consensus 60 -------hknivrl~dvlhsdkkl-------------tlvfe~cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fch 118 (292)
T KOG0662|consen 60 -------HKNIVRLHDVLHSDKKL-------------TLVFEFCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCH 118 (292)
T ss_pred -------hcceeehhhhhccCcee-------------EEeHHHhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhh
Confidence 89999999988776655 799999973 3322211112224443 457789999999999
Q ss_pred HCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHH-HHHHcCCCCCCCCcccHHHHH
Q 008643 261 EFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMAN-DFTRLGFLAKGTDVSPIIPAL 339 (558)
Q Consensus 261 ~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~-~~~~~g~~~~~~Di~~l~~~l 339 (558)
++++.|||+||.|++|+.+|.+|+.|||+++.+.-..+-.-.+. +.+ -|-+| .++....++...|+|+-|+.+
T Consensus 119 shnvlhrdlkpqnllin~ngelkladfglarafgipvrcysaev-vtl-----wyrppdvlfgakly~tsidmwsagcif 192 (292)
T KOG0662|consen 119 SHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEV-VTL-----WYRPPDVLFGAKLYSTSIDMWSAGCIF 192 (292)
T ss_pred hhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEeeecee-eee-----eccCcceeeeeehhccchHhhhcchHH
Confidence 99999999999999999999999999999987654332211111 111 11122 233344567788999999999
Q ss_pred HHHHHhhcCCCCCCCCHHHHHHHHHHHHH
Q 008643 340 EAIWQNSSGKGLADFNFRSVTGQFNKLVY 368 (558)
Q Consensus 340 ~~l~~~~~~~~~~~~~~~~l~~~l~~~~~ 368 (558)
.++-.. |.+ -|.-.++.+++.++.+
T Consensus 193 aelana--grp--lfpg~dvddqlkrif~ 217 (292)
T KOG0662|consen 193 AELANA--GRP--LFPGNDVDDQLKRIFR 217 (292)
T ss_pred HHHhhc--CCC--CCCCCcHHHHHHHHHH
Confidence 887642 222 2333344455555444
No 354
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.79 E-value=2.1e-19 Score=184.54 Aligned_cols=190 Identities=20% Similarity=0.155 Sum_probs=127.2
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||.|++|.||+|+.+.+|+.||+|+.+...... + . ...+
T Consensus 12 ~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~---~--------------------~---------------~~~~ 53 (309)
T cd07845 12 LNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD---G--------------------I---------------PISS 53 (309)
T ss_pred eeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC---C--------------------C---------------cchh
Confidence 467999999999999998899999999876432110 0 0 0000
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecC-CCceEEEEeeeCCCCCCCHHHHhcCCCC--HHHHHHHHHHHHHHHHHHCC
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRL-SGSRVLVMEWIDGIRCTDPQAIKGAGID--VGGFLTVGVSAALRQLLEFG 263 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~vLvmE~i~G~~L~d~~~~~~~~~~--~~~~~~~~v~~~L~~Lh~~G 263 (558)
.+|.. ....+.+.+.+.+..++... .+..+++|||+++ ++.+.........+ ....+..|++.++.+||..|
T Consensus 54 ~~E~~----~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ 128 (309)
T cd07845 54 LREIT----LLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENF 128 (309)
T ss_pred hHHHH----HHHhCCCCCCcceEEEEecCCCCeEEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 11111 11223344444444443322 2456999999986 45443322122222 33457789999999999999
Q ss_pred ceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-CCCCCCCCcccHHHHHHHH
Q 008643 264 LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-GFLAKGTDVSPIIPALEAI 342 (558)
Q Consensus 264 i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-g~~~~~~Di~~l~~~l~~l 342 (558)
++|+|+||+||+++.+|.++|+|||++..+....... .....+..|++|+.... ...+..+|+|++|..++++
T Consensus 129 i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el 202 (309)
T cd07845 129 IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPM------TPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAEL 202 (309)
T ss_pred eecCCCCHHHEEECCCCCEEECccceeeecCCccCCC------CcccccccccChhhhcCCCCcCchHHHHHHHHHHHHH
Confidence 9999999999999999999999999998765432110 00012455788888754 4467789999999999999
Q ss_pred HHh
Q 008643 343 WQN 345 (558)
Q Consensus 343 ~~~ 345 (558)
+.+
T Consensus 203 ~~g 205 (309)
T cd07845 203 LAH 205 (309)
T ss_pred HhC
Confidence 975
No 355
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.79 E-value=2.4e-19 Score=180.25 Aligned_cols=124 Identities=13% Similarity=0.064 Sum_probs=88.8
Q ss_pred ceEEEEeeeCCCCCCCHHHHhcC---CCCH--HHHHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccc
Q 008643 218 SRVLVMEWIDGIRCTDPQAIKGA---GIDV--GGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAE 292 (558)
Q Consensus 218 ~~vLvmE~i~G~~L~d~~~~~~~---~~~~--~~~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~ 292 (558)
..+++|||++|++|.+....... ..+. ...+..+++.|+.|||+.|++|+|+||+||+++.++.++++|||++..
T Consensus 69 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~ 148 (268)
T cd05086 69 PYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPS 148 (268)
T ss_pred ccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccc
Confidence 34899999999999776443211 1122 234667899999999999999999999999999999999999998764
Q ss_pred cChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC-------CCCCCCCcccHHHHHHHHHHh
Q 008643 293 LSQQNKQILIDAVVHAVNEDYAEMANDFTRLG-------FLAKGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 293 l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g-------~~~~~~Di~~l~~~l~~l~~~ 345 (558)
......... .....++..|++|++.... ..+..+|+|++|..++++++.
T Consensus 149 ~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~ 204 (268)
T cd05086 149 RYKEDYIET----EDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFEN 204 (268)
T ss_pred cCcchhhhc----ccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhC
Confidence 322111000 0112345678888876421 235678999999999999863
No 356
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.79 E-value=2e-19 Score=181.65 Aligned_cols=184 Identities=20% Similarity=0.233 Sum_probs=126.8
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCCh-----hhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHh
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIE-----PIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLE 182 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~-----~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~ 182 (558)
+.||.|++|+||+|+.+.+|..||||+.+.+.. ..+..++.+++
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~------------------------------- 53 (283)
T cd07835 5 EKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLK------------------------------- 53 (283)
T ss_pred eEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHH-------------------------------
Confidence 679999999999999988999999998764321 11111111111
Q ss_pred hhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHH--HHHHHHHHHHHHHH
Q 008643 183 ELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVG--GFLTVGVSAALRQL 259 (558)
Q Consensus 183 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~--~~~~~~v~~~L~~L 259 (558)
.+ .|+|+.++.+.+.+. ...+++|||+++ ++.+...... ...+.. ..+..+++.+|.+|
T Consensus 54 ~l----~~~~iv~~~~~~~~~-------------~~~~iv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~l 115 (283)
T cd07835 54 EL----NHPNIVRLLDVVHSE-------------NKLYLVFEFLDL-DLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYC 115 (283)
T ss_pred hc----CCCCccCHhheeccC-------------CeEEEEEeccCc-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 11 145555555544332 445899999964 6655432222 123333 34678899999999
Q ss_pred HHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcccHHHH
Q 008643 260 LEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLG-FLAKGTDVSPIIPA 338 (558)
Q Consensus 260 h~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g-~~~~~~Di~~l~~~ 338 (558)
|..|++|+|++|+||+++.+|.++++|||++..+....... ....++..+++|+....+ ..+..+|+|++|..
T Consensus 116 H~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~------~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~ 189 (283)
T cd07835 116 HSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTY------THEVVTLWYRAPEILLGSRQYSTPVDIWSIGCI 189 (283)
T ss_pred HHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcccc------CccccccCCCCCceeecCcccCcHHHHHHHHHH
Confidence 99999999999999999999999999999987664322110 001135567888866543 45778999999999
Q ss_pred HHHHHHhh
Q 008643 339 LEAIWQNS 346 (558)
Q Consensus 339 l~~l~~~~ 346 (558)
+++++++.
T Consensus 190 l~~l~~g~ 197 (283)
T cd07835 190 FAEMVNRR 197 (283)
T ss_pred HHHHHhCC
Confidence 99999853
No 357
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.79 E-value=8e-20 Score=197.79 Aligned_cols=239 Identities=15% Similarity=0.207 Sum_probs=171.7
Q ss_pred hcCCCCCChHHHHHHHHHHhCCChHhhhcccCcceeeeeeccEEEEEEEcCCCc---EEEEEEecCCChhhHHHHHHHHH
Q 008643 75 QDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGE---DVAIKVQRPGIEPIIYRDLFLFR 151 (558)
Q Consensus 75 qd~~pp~~~~~~~~~ie~elg~~~~~~f~~~~~~pIg~Gs~GqVy~a~~~~~G~---~VAVKv~rp~~~~~i~~Dl~ilr 151 (558)
..-+.|+.++.-.+.+. |+-+.++--+-.+ ++.||+|.||.||+|+++..|+ .||||..+-+-.+..+
T Consensus 604 k~YiDP~TYEDPnqAvr-eFakEId~s~i~I-e~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gytekqr------- 674 (996)
T KOG0196|consen 604 KTYIDPHTYEDPNQAVR-EFAKEIDPSCVKI-EKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQR------- 674 (996)
T ss_pred eeecCCccccCccHHHH-HhhhhcChhheEE-EEEEecccccceecccccCCCCcceeEEEeeeccCccHHHH-------
Confidence 33455666554333322 2222222222233 4789999999999999987774 6999999887655333
Q ss_pred HHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCC
Q 008643 152 TLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRC 231 (558)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L 231 (558)
.||..||.- .+.|.|++.++.-.|+.. +....+++|||++++|
T Consensus 675 --------------------------------rdFL~EAsI----MGQFdHPNIIrLEGVVTk-s~PvMIiTEyMENGsL 717 (996)
T KOG0196|consen 675 --------------------------------RDFLSEASI----MGQFDHPNIIRLEGVVTK-SKPVMIITEYMENGSL 717 (996)
T ss_pred --------------------------------hhhhhhhhh----cccCCCCcEEEEEEEEec-CceeEEEhhhhhCCcH
Confidence 346666664 345566666666555542 4556799999999999
Q ss_pred CCHHHHhcCCCCHHHH--HHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHH
Q 008643 232 TDPQAIKGAGIDVGGF--LTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAV 309 (558)
Q Consensus 232 ~d~~~~~~~~~~~~~~--~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~ 309 (558)
+.....+.......++ ..++|.+|++||-++|++|||+-..|||++.+-..|+.|||+++.+.++.-..+ ...
T Consensus 718 DsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~y-----tt~ 792 (996)
T KOG0196|consen 718 DSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAY-----TTL 792 (996)
T ss_pred HHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecccCCCccc-----ccc
Confidence 9886655544444444 568899999999999999999999999999999999999999998866542111 111
Q ss_pred hc--CHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 008643 310 NE--DYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNSSGKGLADFNFRSVTGQFNK 365 (558)
Q Consensus 310 ~~--d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~~~~~~~~~~~~~~l~~~l~~ 365 (558)
.| -..+.||+.+.....+..+|+|++|..++++++ |...|+.+++-++++..+.+
T Consensus 793 GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmS-yGERPYWdmSNQdVIkaIe~ 849 (996)
T KOG0196|consen 793 GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS-YGERPYWDMSNQDVIKAIEQ 849 (996)
T ss_pred CCccceeecChhHhhhcccCchhhccccceEEEEecc-cCCCcccccchHHHHHHHHh
Confidence 12 234678999999999999999999999999987 56678888888777666543
No 358
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.78 E-value=4.6e-19 Score=178.90 Aligned_cols=190 Identities=21% Similarity=0.203 Sum_probs=127.0
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhh-HHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPI-IYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~-i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
+.||.|++|.||+|+.+.+|+.||||+.+...... ... .+..|++
T Consensus 5 ~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~---------------------------------~~~~e~~- 50 (287)
T cd07838 5 AEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPL---------------------------------STLREIA- 50 (287)
T ss_pred EEecccCceEEEEEEECCCCCEEEEEEeccccccchhhh---------------------------------hHHHHHH-
Confidence 57999999999999997789999999987432210 000 0111111
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeec----CCCceEEEEeeeCCCCCCCHHHHh-cCCCCH--HHHHHHHHHHHHHHH
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKR----LSGSRVLVMEWIDGIRCTDPQAIK-GAGIDV--GGFLTVGVSAALRQL 259 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~----~~~~~vLvmE~i~G~~L~d~~~~~-~~~~~~--~~~~~~~v~~~L~~L 259 (558)
.+.++ ..+.+...+.+...+.. .+...+++|||+++ ++.+..... ....+. ...+..+++.+|.+|
T Consensus 51 -----~l~~l-~~~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~L 123 (287)
T cd07838 51 -----LLKQL-ESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFL 123 (287)
T ss_pred -----HHHHh-hccCCCCcceEEEEEeeccCCCCceeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHH
Confidence 11111 11112222222222221 12236899999986 555433221 112333 344678899999999
Q ss_pred HHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHH
Q 008643 260 LEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPAL 339 (558)
Q Consensus 260 h~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l 339 (558)
|..|++|+|++|+||+++.+++++++|||.+..+...... ....++..+++|+....+..+..+|+|++|..+
T Consensus 124 H~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~~~-------~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l 196 (287)
T cd07838 124 HSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMAL-------TSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIF 196 (287)
T ss_pred HHCCeeeccCChhhEEEccCCCEEEeccCcceeccCCccc-------ccccccccccChHHhccCCCCCcchhhhHHHHH
Confidence 9999999999999999999999999999998876543211 011245668899998888888899999999999
Q ss_pred HHHHHh
Q 008643 340 EAIWQN 345 (558)
Q Consensus 340 ~~l~~~ 345 (558)
++++++
T Consensus 197 ~~l~~~ 202 (287)
T cd07838 197 AELFRR 202 (287)
T ss_pred HHHHhC
Confidence 999974
No 359
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.78 E-value=2.2e-19 Score=180.01 Aligned_cols=198 Identities=16% Similarity=0.154 Sum_probs=131.8
Q ss_pred cceeeeeeccEEEEEEEcC-CCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhc
Q 008643 107 SQTIAAASLGQVYRATLRE-TGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELD 185 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~-~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld 185 (558)
.+.||+|++|.||+|.++. +++.||||..+.........+ .... .....+..|+.
T Consensus 5 ~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~--------------------~~~~----~~~~~~~~e~~ 60 (269)
T cd08528 5 LEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDK--------------------RERD----KSIGDIVSEVT 60 (269)
T ss_pred hhhhcCCCCceEEEEEEcCCCCceeeeeEeecccccccccc--------------------ccch----HHHHHHHHHHH
Confidence 3679999999999999966 578999998764321100000 0000 00001111221
Q ss_pred HHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHH-h--cCCCCHH--HHHHHHHHHHHHHHH
Q 008643 186 YTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAI-K--GAGIDVG--GFLTVGVSAALRQLL 260 (558)
Q Consensus 186 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~-~--~~~~~~~--~~~~~~v~~~L~~Lh 260 (558)
. +.....+.+.+..... .......+++|||++|++|.+.... . ....+.. ..+..+++.++.+||
T Consensus 61 ~---------l~~~~~h~~i~~~~~~-~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh 130 (269)
T cd08528 61 I---------IKEQLRHPNIVRYYKT-FLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLH 130 (269)
T ss_pred H---------HhhcCCCCCeeeEEee-EccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhc
Confidence 1 1111222222222222 2234567999999999999775432 1 1223333 345678999999999
Q ss_pred H-CCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHH
Q 008643 261 E-FGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPAL 339 (558)
Q Consensus 261 ~-~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l 339 (558)
. .|++|+|+||.||+++.++.++++|||++........ .....++..+++|+....+..+..+|+|++|..+
T Consensus 131 ~~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~-------~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll 203 (269)
T cd08528 131 KEKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPESK-------LTSVVGTILYSCPEIVKNEPYGEKADVWAFGCIL 203 (269)
T ss_pred cCCceeecCCCHHHEEECCCCcEEEecccceeecccccc-------cccccCcccCcChhhhcCCCCchHHHHHHHHHHH
Confidence 5 7899999999999999999999999999987765431 1223467778899999888888899999999999
Q ss_pred HHHHHh
Q 008643 340 EAIWQN 345 (558)
Q Consensus 340 ~~l~~~ 345 (558)
++++.+
T Consensus 204 ~~l~~g 209 (269)
T cd08528 204 YQMCTL 209 (269)
T ss_pred HHHHhC
Confidence 999974
No 360
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.78 E-value=1.3e-19 Score=184.10 Aligned_cols=189 Identities=16% Similarity=0.138 Sum_probs=125.0
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|++|.||+|..+.+|+.||||+.+........ ..+
T Consensus 10 ~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~---------------------------------------~~~ 50 (291)
T cd07870 10 LEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVP---------------------------------------FTA 50 (291)
T ss_pred EEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCc---------------------------------------HHH
Confidence 47899999999999999889999999987643211100 001
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCC--HHHHHHHHHHHHHHHHHHCCc
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGID--VGGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~--~~~~~~~~v~~~L~~Lh~~Gi 264 (558)
.+|... ...+.+.+.+.+... .......+++|||+++ ++.+.......... ....+..+++.+|.+||..|+
T Consensus 51 ~~e~~~----l~~l~h~ni~~~~~~-~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i 124 (291)
T cd07870 51 IREASL----LKGLKHANIVLLHDI-IHTKETLTFVFEYMHT-DLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHI 124 (291)
T ss_pred HHHHHH----HHhcCCCCEeEEEEE-EecCCeEEEEEecccC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 112211 122233332222222 2234567899999975 44333221112222 334567899999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcccHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLG-FLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g-~~~~~~Di~~l~~~l~~l~ 343 (558)
+|+|+||+||+++.+|+++++|||++.......... ....++..+++|+....+ ..+..+|+|++|..+++++
T Consensus 125 ~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~ 198 (291)
T cd07870 125 LHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTY------SSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEML 198 (291)
T ss_pred ccCCCChHHEEEcCCCcEEEeccccccccCCCCCCC------CCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHH
Confidence 999999999999999999999999987543321110 011246678888877542 3566789999999999999
Q ss_pred Hhh
Q 008643 344 QNS 346 (558)
Q Consensus 344 ~~~ 346 (558)
++.
T Consensus 199 ~g~ 201 (291)
T cd07870 199 QGQ 201 (291)
T ss_pred hCC
Confidence 853
No 361
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.78 E-value=5.1e-19 Score=184.86 Aligned_cols=200 Identities=14% Similarity=0.104 Sum_probs=130.4
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCCh---hhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhh
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIE---PIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEE 183 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~---~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~E 183 (558)
.++||.|++|.||+|+.+.+|+.||+|+....-. +.+..++.+++.+
T Consensus 10 ~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l------------------------------ 59 (342)
T cd07854 10 LRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRL------------------------------ 59 (342)
T ss_pred EEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhc------------------------------
Confidence 4799999999999999988999999998743221 1222333332221
Q ss_pred hcHHHHHHHHHHHHHhcCCCCCeeec--eeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 008643 184 LDYTLEARNMEDFLENFKDDPTVKIP--RVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLE 261 (558)
Q Consensus 184 ld~~~Ea~n~~~~~~~~~~~~~v~vP--~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~ 261 (558)
.|+|+.++.+.+.....-... ....+ -...+++|||+++ ++.+.........+....+..|++.|+.+||+
T Consensus 60 -----~h~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~lv~e~~~~-~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~ 132 (342)
T cd07854 60 -----DHDNIVKVYEVLGPSGSDLTEDVGSLTE-LNSVYIVQEYMET-DLANVLEQGPLSEEHARLFMYQLLRGLKYIHS 132 (342)
T ss_pred -----CCCcchhhHhhhcccccccccccccccc-cceEEEEeecccc-cHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 256666666655443211000 00000 1235899999975 55433221122334445678899999999999
Q ss_pred CCceecCCCCCCEEEec-CCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-CCCCCCCCcccHHHHH
Q 008643 262 FGLFHGDPHPGNIFAMR-DGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-GFLAKGTDVSPIIPAL 339 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~-dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-g~~~~~~Di~~l~~~l 339 (558)
.|++|+|+||+||+++. ++.++++|||++..+....... .......++..+++|+.... ...+..+|+|++|+.+
T Consensus 133 ~givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil 209 (342)
T cd07854 133 ANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHK---GYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIF 209 (342)
T ss_pred CCcccCCCCHHHEEEcCCCceEEECCcccceecCCccccc---cccccccccccccCHHHHhCccccCchhhHHHHHHHH
Confidence 99999999999999975 5678999999998764322110 00001124556888887643 3456789999999999
Q ss_pred HHHHHhh
Q 008643 340 EAIWQNS 346 (558)
Q Consensus 340 ~~l~~~~ 346 (558)
++++.+.
T Consensus 210 ~el~~g~ 216 (342)
T cd07854 210 AEMLTGK 216 (342)
T ss_pred HHHHhCC
Confidence 9998743
No 362
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.78 E-value=3.1e-20 Score=195.35 Aligned_cols=215 Identities=15% Similarity=0.162 Sum_probs=158.4
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|-||.||.|.. ..+..||||..||+.....+.| |
T Consensus 543 ~ekiGeGqFGEVhLCev-eg~lkVAVK~Lr~~a~~~~r~~---------------------------------------F 582 (807)
T KOG1094|consen 543 KEKIGEGQFGEVHLCEV-EGPLKVAVKILRPDATKNARND---------------------------------------F 582 (807)
T ss_pred hhhhcCcccceeEEEEe-cCceEEEEeecCcccchhHHHH---------------------------------------H
Confidence 46899999999999999 5679999999999865433222 2
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCC-CH--HHHHHHHHHHHHHHHHHCC
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGI-DV--GGFLTVGVSAALRQLLEFG 263 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~-~~--~~~~~~~v~~~L~~Lh~~G 263 (558)
..|.+.+.+ ++|++.+.+-.+.-. ....+++|||++.|+|.++........ +. ...+..|+.+|++||-+.+
T Consensus 583 ~kEIkiLsq----LkhPNIveLvGVC~~-DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~n 657 (807)
T KOG1094|consen 583 LKEIKILSR----LKHPNIVELLGVCVQ-DDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLN 657 (807)
T ss_pred HHHHHHHhc----cCCCCeeEEEeeeec-CCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhc
Confidence 333333222 245544444444321 234489999999999988755443322 22 2247889999999999999
Q ss_pred ceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 008643 264 LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 264 i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~ 343 (558)
|+|||+.+.|+|++.++++||+||||++.+-...-...- +-.--...+||.+.+-+|..+..+|+|++|.++++++
T Consensus 658 fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vq----gr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~ 733 (807)
T KOG1094|consen 658 FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQ----GRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVF 733 (807)
T ss_pred hhhccccccceeecCcccEEecCcccccccccCCceeee----cceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHH
Confidence 999999999999999999999999999976543221100 0000134689999999999999999999999999999
Q ss_pred HhhcCCCCCCCCHHHHHHHHHHHHHhc
Q 008643 344 QNSSGKGLADFNFRSVTGQFNKLVYNY 370 (558)
Q Consensus 344 ~~~~~~~~~~~~~~~l~~~l~~~~~~~ 370 (558)
......++.+..-.++.+...++....
T Consensus 734 ~~C~e~Py~~lt~e~vven~~~~~~~~ 760 (807)
T KOG1094|consen 734 MLCREQPYSQLTDEQVVENAGEFFRDQ 760 (807)
T ss_pred HHHhhCchhhhhHHHHHHhhhhhcCCC
Confidence 998889988888777777776666543
No 363
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.78 E-value=8.3e-20 Score=170.94 Aligned_cols=212 Identities=19% Similarity=0.202 Sum_probs=144.4
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||.|++|+|-+-++..+|.-.|||-++-.+..+ ..++++.|+|..
T Consensus 52 ~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q---------------------------------~q~r~L~dldi~ 98 (282)
T KOG0984|consen 52 EELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQ---------------------------------EQKRLLMDLDII 98 (282)
T ss_pred hhhcCCccchhhheeeccCCeEEEEeeehhhcChH---------------------------------HHHHHHHhhhhh
Confidence 46899999999999999999999999877554321 122344455532
Q ss_pred HH---HHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHH--HHhcCCCCHH---HHHHHHHHHHHHHH
Q 008643 188 LE---ARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQ--AIKGAGIDVG---GFLTVGVSAALRQL 259 (558)
Q Consensus 188 ~E---a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~--~~~~~~~~~~---~~~~~~v~~~L~~L 259 (558)
+. .+.++.|++.+.. ++..++.||.++ .+++.+. .+++.+.-++ -.+..-+..||.+|
T Consensus 99 ~r~~~CPf~V~FyGa~~r-------------egdvwIcME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L 164 (282)
T KOG0984|consen 99 MRTVDCPFTVHFYGALFR-------------EGDVWICMELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFL 164 (282)
T ss_pred ccCCCCCeEEEeehhhhc-------------cccEEEeHHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHH
Confidence 21 2233334433333 455599999996 4554322 2233332222 23555688999999
Q ss_pred HHC-CceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCC----CCCCCccc
Q 008643 260 LEF-GLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFL----AKGTDVSP 334 (558)
Q Consensus 260 h~~-Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~----~~~~Di~~ 334 (558)
|+. .++|||+||+|||++.+|++|+||||+++.+.+.... .+-.|--.||||+.+.-+.- +-++|+|+
T Consensus 165 ~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAk-------t~daGCkpYmaPEri~~e~n~~gY~vksDvWS 237 (282)
T KOG0984|consen 165 HSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAK-------TMDAGCKPYMAPERINPELNQKGYSVKSDVWS 237 (282)
T ss_pred HHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHH-------HHhcCCCccCChhhcCcccCcccceeehhhhh
Confidence 965 8999999999999999999999999999998775432 22347778999999876543 34689999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchh
Q 008643 335 IIPALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPER 377 (558)
Q Consensus 335 l~~~l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~ 377 (558)
+|..+-++-...++ +. +...-.+++.+++.+-+.++|..
T Consensus 238 LGItmiElA~lr~P--Y~--~w~tpF~qLkqvVeep~P~Lp~~ 276 (282)
T KOG0984|consen 238 LGITMIEMAILRFP--YE--SWGTPFQQLKQVVEEPSPQLPAD 276 (282)
T ss_pred hhhhhhhhhhcccc--cc--ccCCHHHHHHHHhcCCCCCCccc
Confidence 99999888764332 22 22333466777777777777753
No 364
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.78 E-value=7.9e-19 Score=171.99 Aligned_cols=144 Identities=16% Similarity=0.269 Sum_probs=104.4
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.+|.|+||.||.+.. ++..+|||+.+|..... +- +..++...=-|
T Consensus 36 ~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~---~~----------------------------~~~~f~~g~~~ 82 (232)
T PRK10359 36 IKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRT---ER----------------------------FLKSFVKGDYY 82 (232)
T ss_pred EEEecCCCceEEEEEec--CCCcEEEEEechhcCch---HH----------------------------HHHhhhhhHHH
Confidence 37899999999999755 57799999999875331 00 00111111114
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeee---c-----CCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHH
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYK---R-----LSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQ 258 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~---~-----~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~ 258 (558)
.+|+.++.++.. +.+..|..+. + +++..+|+|||++|.+|.+... .+. ....++..++.+
T Consensus 83 e~Ea~~l~rL~~-----~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~~--~~~~~i~~~l~~ 150 (232)
T PRK10359 83 ENLIVQTDRVRS-----EGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE-----ISE--DVKAKIKASIES 150 (232)
T ss_pred HHHHHHHHHHHH-----CCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhh-----ccH--HHHHHHHHHHHH
Confidence 667888888733 4555565552 2 3567899999999998876521 122 245588999999
Q ss_pred HHHCCceecCCCCCCEEEecCCCeEEeecCcccccChh
Q 008643 259 LLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQ 296 (558)
Q Consensus 259 Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~ 296 (558)
+|+.|++|+||||+|++++++| ++++|||.+.....+
T Consensus 151 lH~~gi~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~ 187 (232)
T PRK10359 151 LHQHGMVSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQR 187 (232)
T ss_pred HHHcCCccCCCChHHEEEeCCC-EEEEECCCcccccch
Confidence 9999999999999999999999 999999999877543
No 365
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.78 E-value=1.4e-18 Score=175.01 Aligned_cols=183 Identities=19% Similarity=0.222 Sum_probs=133.2
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCCh-----hhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHh
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIE-----PIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLE 182 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~-----~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~ 182 (558)
+.||+|++|.||+|+...+|+.||+|+.+.... +....++.+++.
T Consensus 5 ~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~------------------------------ 54 (282)
T cd07829 5 EKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKE------------------------------ 54 (282)
T ss_pred hcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHh------------------------------
Confidence 579999999999999988899999999876431 111222222221
Q ss_pred hhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCH--HHHHHHHHHHHHHHHH
Q 008643 183 ELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDV--GGFLTVGVSAALRQLL 260 (558)
Q Consensus 183 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~--~~~~~~~v~~~L~~Lh 260 (558)
+ .|+|+.++.+.+.+... .+++|||+++ +|.+.........+. ...+..+++.++.+||
T Consensus 55 -~----~~~~i~~~~~~~~~~~~-------------~~~v~e~~~~-~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH 115 (282)
T cd07829 55 -L----KHPNIVKLLDVIHTERK-------------LYLVFEYCDM-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCH 115 (282)
T ss_pred -c----CCCCHHHHHhhhhcCCc-------------eEEEecCcCc-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH
Confidence 1 16777777776655433 4899999985 676654333223333 3446688999999999
Q ss_pred HCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcccHHHHH
Q 008643 261 EFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLG-FLAKGTDVSPIIPAL 339 (558)
Q Consensus 261 ~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g-~~~~~~Di~~l~~~l 339 (558)
..|++|+|++|.||+++.+|.++++|||.+.......... .....+..+++|+.+..+ ..++..|+|++|..+
T Consensus 116 ~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~------~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l 189 (282)
T cd07829 116 SHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTY------THEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIF 189 (282)
T ss_pred HCCcccCCCChheEEEcCCCCEEEecCCcccccCCCcccc------CccccCcCcCChHHhcCCcCCCccccHHHHHHHH
Confidence 9999999999999999999999999999988765433211 011234567888888766 778889999999999
Q ss_pred HHHHHh
Q 008643 340 EAIWQN 345 (558)
Q Consensus 340 ~~l~~~ 345 (558)
++++.+
T Consensus 190 ~~l~~~ 195 (282)
T cd07829 190 AEMITG 195 (282)
T ss_pred HHHHhC
Confidence 999975
No 366
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.78 E-value=7.6e-20 Score=177.19 Aligned_cols=196 Identities=16% Similarity=0.198 Sum_probs=128.1
Q ss_pred ccC-cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHh
Q 008643 104 KIS-SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLE 182 (558)
Q Consensus 104 ~~~-~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~ 182 (558)
+++ ++|||-|.||.||..++.++|+.||.|.. |++-..+..-- ++++
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~-pnvfq~L~s~k-------------------------------rvFr 101 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKM-PNVFQNLASCK-------------------------------RVFR 101 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhc-chHHHHHHHHH-------------------------------HHHH
Confidence 444 68999999999999999999999999965 23222211111 2222
Q ss_pred hhcHH--HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHH-HhcCCCCHHHHHHHHHHHHHHHH
Q 008643 183 ELDYT--LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQA-IKGAGIDVGGFLTVGVSAALRQL 259 (558)
Q Consensus 183 Eld~~--~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~-~~~~~~~~~~~~~~~v~~~L~~L 259 (558)
|+... ..|.|.....+.++... .+|-.+.|.++|.+.. +|..++. -.....|-.+.+..||+.||+||
T Consensus 102 e~kmLcfFkHdNVLSaLDILQPph--------~dfFqEiYV~TELmQS-DLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYL 172 (449)
T KOG0664|consen 102 EIKMLSSFRHDNVLSLLDILQPAN--------PSFFQELYVLTELMQS-DLHKIIVSPQALTPDHVKVFVYQILRGLKYL 172 (449)
T ss_pred HHHHHHhhccccHHHHHHhcCCCC--------chHHHHHHHHHHHHHh-hhhheeccCCCCCcchhhhhHHHHHhhhHHH
Confidence 22211 12333333333332211 0111222445555542 2222111 11123455677889999999999
Q ss_pred HHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-CCCCCCCCcccHHHH
Q 008643 260 LEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-GFLAKGTDVSPIIPA 338 (558)
Q Consensus 260 h~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-g~~~~~~Di~~l~~~ 338 (558)
|..||.|||+||||++++.+..+||+|||+++.-+.+.+..+..-++. -.|-||+++-. .-++..+|+|+.|+.
T Consensus 173 HsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hMTqEVVT-----QYYRAPEiLMGaRhYs~AvDiWSVGCI 247 (449)
T KOG0664|consen 173 HTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNMTHEVVT-----QYYRAPELLMGARRYTGAVDIWSVGCI 247 (449)
T ss_pred hhcchhhccCCCccEEeccCceEEecccccccccchhhhhhhHHHHHH-----HHhccHHHhhcchhhcCccceehhhHH
Confidence 999999999999999999999999999999998888777766655442 23446666543 457788999999999
Q ss_pred HHHHHHh
Q 008643 339 LEAIWQN 345 (558)
Q Consensus 339 l~~l~~~ 345 (558)
+.+++++
T Consensus 248 FaELLgR 254 (449)
T KOG0664|consen 248 FAELLQR 254 (449)
T ss_pred HHHHHhh
Confidence 9999876
No 367
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.78 E-value=1.8e-18 Score=175.39 Aligned_cols=188 Identities=20% Similarity=0.155 Sum_probs=124.2
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|++|.||+++.+.+|+.||||..+........ .. +
T Consensus 9 ~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~---------------------------------~~------~ 49 (288)
T cd06616 9 LGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQ---------------------------------KR------L 49 (288)
T ss_pred HHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHH---------------------------------HH------H
Confidence 35799999999999999889999999987643211000 01 1
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHH---H-hcCCCCHH--HHHHHHHHHHHHHHH
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQA---I-KGAGIDVG--GFLTVGVSAALRQLL 260 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~---~-~~~~~~~~--~~~~~~v~~~L~~Lh 260 (558)
..|...+.++ ..+...+.+...+. .....+++|||+++ ++.+... . .....+.. ..+..+++.++.|||
T Consensus 50 ~~e~~~l~~~---~~~~~iv~~~~~~~-~~~~~~~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh 124 (288)
T cd06616 50 LMDLDVVMRS---SDCPYIVKFYGALF-REGDCWICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLK 124 (288)
T ss_pred HHHHHHHHHh---cCCCCEeeeeeEEe-cCCcEEEEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh
Confidence 1111111111 11222222222222 24566899999874 4433211 1 11223333 446788999999999
Q ss_pred H-CCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC---CCCCCCCcccHH
Q 008643 261 E-FGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLG---FLAKGTDVSPII 336 (558)
Q Consensus 261 ~-~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g---~~~~~~Di~~l~ 336 (558)
+ .|++|+|+||.||+++.+|.++++|||++..+...... ....++..+++|+....+ .++..+|+|++|
T Consensus 125 ~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG 197 (288)
T cd06616 125 EELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAK-------TRDAGCRPYMAPERIDPSARDGYDVRSDVWSLG 197 (288)
T ss_pred hcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCCcc-------ccccCccCccCHHHhccccccCCcchhhhhHHH
Confidence 7 59999999999999999999999999998765432111 112356678899988765 677889999999
Q ss_pred HHHHHHHHh
Q 008643 337 PALEAIWQN 345 (558)
Q Consensus 337 ~~l~~l~~~ 345 (558)
..+++++++
T Consensus 198 ~il~el~~g 206 (288)
T cd06616 198 ITLYEVATG 206 (288)
T ss_pred HHHHHHHhC
Confidence 999999874
No 368
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.78 E-value=2e-18 Score=174.23 Aligned_cols=191 Identities=13% Similarity=0.087 Sum_probs=131.9
Q ss_pred cceeeeeeccEEEEEEEcC----CCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHh
Q 008643 107 SQTIAAASLGQVYRATLRE----TGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLE 182 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~----~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~ 182 (558)
.+.||+|+||.||+|.... ++..|++|..+......... .
T Consensus 11 ~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~---------------------------------~--- 54 (280)
T cd05043 11 SDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVT---------------------------------L--- 54 (280)
T ss_pred eeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHH---------------------------------H---
Confidence 4689999999999999854 26889999876543211000 0
Q ss_pred hhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-------CCCCHH--HHHHHHHH
Q 008643 183 ELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-------AGIDVG--GFLTVGVS 253 (558)
Q Consensus 183 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-------~~~~~~--~~~~~~v~ 253 (558)
+.+|.. ....+.+.+.+.+...+.......++++||+++++|.+...... ..++.. ..+..+++
T Consensus 55 ---~~~e~~----~l~~l~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~ 127 (280)
T cd05043 55 ---LLQESC----LLYGLSHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIA 127 (280)
T ss_pred ---HHHHHH----HHHhCCCCCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHH
Confidence 112222 12223344444444433333456789999999999877643321 112332 34667899
Q ss_pred HHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcc
Q 008643 254 AALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVS 333 (558)
Q Consensus 254 ~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~ 333 (558)
.++.|||+.|++|+|++|.||+++.++.++++|||+++.+.+...... .....+...|++|+.......+..+|+|
T Consensus 128 ~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~----~~~~~~~~~y~apE~~~~~~~~~~~Di~ 203 (280)
T cd05043 128 CGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCL----GDNENRPVKWMALESLVNKEYSSASDVW 203 (280)
T ss_pred HHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCCcccccCCceEEe----CCCCCcchhccCHHHHhcCCCCchhhHH
Confidence 999999999999999999999999999999999999987644321100 0012345678999998877788899999
Q ss_pred cHHHHHHHHHH
Q 008643 334 PIIPALEAIWQ 344 (558)
Q Consensus 334 ~l~~~l~~l~~ 344 (558)
++|..++++++
T Consensus 204 slG~~l~el~~ 214 (280)
T cd05043 204 SFGVLLWELMT 214 (280)
T ss_pred HhHHHHHHHhc
Confidence 99999999986
No 369
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.78 E-value=2.8e-18 Score=172.26 Aligned_cols=191 Identities=14% Similarity=0.115 Sum_probs=125.0
Q ss_pred ceeeeeeccEEEEEEEcC---CCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhh
Q 008643 108 QTIAAASLGQVYRATLRE---TGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEEL 184 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~---~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~El 184 (558)
+.||+|++|.||+|.++. +|+.||||+.+.+.......+ .
T Consensus 5 ~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~--------------------------------~----- 47 (273)
T cd05074 5 RMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIE--------------------------------E----- 47 (273)
T ss_pred hcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHH--------------------------------H-----
Confidence 679999999999998743 578999998876532211000 0
Q ss_pred cHHHHHHHHHHHHHhcCCCCCeeeceeeecC-----CCceEEEEeeeCCCCCCCHHHHhcC-----CCCH--HHHHHHHH
Q 008643 185 DYTLEARNMEDFLENFKDDPTVKIPRVYKRL-----SGSRVLVMEWIDGIRCTDPQAIKGA-----GIDV--GGFLTVGV 252 (558)
Q Consensus 185 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-----~~~~vLvmE~i~G~~L~d~~~~~~~-----~~~~--~~~~~~~v 252 (558)
+.+|.. ....+.+.+.+.+....... ....++++||.+++++.+....... ..+. ...+..++
T Consensus 48 -~~~E~~----~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i 122 (273)
T cd05074 48 -FLREAA----CMKEFDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDI 122 (273)
T ss_pred -HHHHHH----HHhcCCCCCcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Confidence 111111 11122222222222211110 1123688999999988765432211 1222 24567889
Q ss_pred HHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCc
Q 008643 253 SAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDV 332 (558)
Q Consensus 253 ~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di 332 (558)
+.++.|||+.|++|+|+||.||+++.++.++++|||.+..+......... ....+...+++|+....+..+..+|+
T Consensus 123 ~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~~sDi 198 (273)
T cd05074 123 ASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQG----CASKLPVKWLALESLADNVYTTHSDV 198 (273)
T ss_pred HHHHHHHHhCCEeecccchhhEEEcCCCCEEECcccccccccCCcceecC----CCccCchhhcCHhHHhcCccchhhhh
Confidence 99999999999999999999999999999999999998876432210000 01123456788888888888889999
Q ss_pred ccHHHHHHHHHH
Q 008643 333 SPIIPALEAIWQ 344 (558)
Q Consensus 333 ~~l~~~l~~l~~ 344 (558)
|++|..+++++.
T Consensus 199 ~slG~il~el~~ 210 (273)
T cd05074 199 WAFGVTMWEIMT 210 (273)
T ss_pred HHHHHHHHHHhh
Confidence 999999999986
No 370
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.78 E-value=3.3e-18 Score=165.01 Aligned_cols=162 Identities=20% Similarity=0.275 Sum_probs=111.8
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChh--hHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhh
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEP--IIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEEL 184 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~--~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~El 184 (558)
.++||+|++|+||+|.. .+|+.||||+.+++... ....+...+.. ....... -..+.
T Consensus 20 ~~~i~~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~------~~~~~ 78 (198)
T cd05144 20 GNQIGVGKESDVYLALD-PDGNPVALKFHRLGRTSFRKVKRKRDYLGD--------------RKHASWL------YLSRL 78 (198)
T ss_pred CCccccCcceEEEEEEc-CCCCEEEEEEEecccchhhhhcchHHHHhc--------------cccchhH------HHhHH
Confidence 47899999999999998 58999999998765311 01100000000 0000000 01122
Q ss_pred cHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHCCc
Q 008643 185 DYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 185 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi 264 (558)
.+..|...+.++.. ..+.+|.++. .+..+++|||++|+++.+... ......+..++..++.++|..|+
T Consensus 79 ~~~~E~~~l~~l~~-----~~i~v~~~~~--~~~~~lv~e~~~g~~L~~~~~-----~~~~~~~~~~i~~~l~~lh~~gi 146 (198)
T cd05144 79 AAQKEFAALKALYE-----EGFPVPKPID--WNRHAVVMEYIDGVELYRVRV-----LEDPEEVLDEILEEIVKAYKHGI 146 (198)
T ss_pred HHHHHHHHHHHHHH-----cCCCCCceee--cCCceEEEEEeCCcchhhccc-----cccHHHHHHHHHHHHHHHHHCCC
Confidence 24455566655533 2245677765 356699999999998876421 12234566788999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQIL 301 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l 301 (558)
+|+|+||+||+++.+++++++|||++..++.+.++.+
T Consensus 147 ~H~Dl~p~Nill~~~~~~~liDfg~~~~~~~~~~~~~ 183 (198)
T cd05144 147 IHGDLSEFNILVDDDEKIYIIDWPQMVSTDHPNAEEL 183 (198)
T ss_pred CcCCCCcccEEEcCCCcEEEEECCccccCCCccHHHH
Confidence 9999999999999999999999999999998887765
No 371
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.78 E-value=2e-18 Score=177.43 Aligned_cols=143 Identities=13% Similarity=0.165 Sum_probs=103.4
Q ss_pred HHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCH--HHHHHHHHHHHHHHHHHCCcee
Q 008643 190 ARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDV--GGFLTVGVSAALRQLLEFGLFH 266 (558)
Q Consensus 190 a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~--~~~~~~~v~~~L~~Lh~~Gi~H 266 (558)
|+|+.++...+.... ..+++|||++++++.++..... .+.+. ...+..+++.||.|||++|++|
T Consensus 58 h~~i~~~~~~~~~~~-------------~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH 124 (314)
T cd08216 58 HPNILPYVTSFIVDS-------------ELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIH 124 (314)
T ss_pred CcchhhhhheeecCC-------------eEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 677777766654433 3499999999999987654321 22333 3456789999999999999999
Q ss_pred cCCCCCCEEEecCCCeEEeecCcccccChhhHHH-HHHHHHHHHhcCHHHHHHHHHHcC--CCCCCCCcccHHHHHHHHH
Q 008643 267 GDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQI-LIDAVVHAVNEDYAEMANDFTRLG--FLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 267 ~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~-l~~~~~~~~~~d~~~~a~~~~~~g--~~~~~~Di~~l~~~l~~l~ 343 (558)
+|+||+||+++.+|.+++.|||.+..+....... ..........++..|++|+.+... .+++.+|+|++|..+++++
T Consensus 125 ~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~ 204 (314)
T cd08216 125 RSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELA 204 (314)
T ss_pred CCCCcceEEEecCCceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHH
Confidence 9999999999999999999999887664322110 000001122355678899988653 3567899999999999998
Q ss_pred Hh
Q 008643 344 QN 345 (558)
Q Consensus 344 ~~ 345 (558)
.+
T Consensus 205 ~g 206 (314)
T cd08216 205 NG 206 (314)
T ss_pred hC
Confidence 74
No 372
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.78 E-value=5.9e-19 Score=182.78 Aligned_cols=191 Identities=17% Similarity=0.191 Sum_probs=132.8
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCCh-----hhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIE-----PIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLL 181 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~-----~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~ 181 (558)
.+.||.|++|.||+|+...+|+.||||+..+... +.+..++.+++.
T Consensus 5 ~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~----------------------------- 55 (330)
T cd07834 5 LKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRH----------------------------- 55 (330)
T ss_pred eeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHh-----------------------------
Confidence 3689999999999999987899999998765431 112222222211
Q ss_pred hhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCC--HHHHHHHHHHHHHHHH
Q 008643 182 EELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGID--VGGFLTVGVSAALRQL 259 (558)
Q Consensus 182 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~--~~~~~~~~v~~~L~~L 259 (558)
+ .|+|+.++.+.+..... ...+..+++|||+++ ++.+..... ...+ ....+..+++.++.+|
T Consensus 56 --l----~~~~i~~~~~~~~~~~~--------~~~~~~~lv~e~~~~-~l~~~l~~~-~~l~~~~~~~i~~~l~~~l~~L 119 (330)
T cd07834 56 --L----RHENIIGLLDILRPPSP--------EDFNDVYIVTELMET-DLHKVIKSP-QPLTDDHIQYFLYQILRGLKYL 119 (330)
T ss_pred --c----CCcchhhhhhhhcccCc--------ccccceEEEecchhh-hHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHH
Confidence 1 26777777766554431 012345899999985 454432111 1223 3345778999999999
Q ss_pred HHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcccHHHH
Q 008643 260 LEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLG-FLAKGTDVSPIIPA 338 (558)
Q Consensus 260 h~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g-~~~~~~Di~~l~~~ 338 (558)
|..|++|+|+||+||+++.+|+++++|||++.......... .......++..|++|+..... ..+..+|+|++|..
T Consensus 120 H~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~i 196 (330)
T cd07834 120 HSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEK---GFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCI 196 (330)
T ss_pred HhCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccccccc---ccccccccccCcCCceeeecccCCCcchhHHHHHHH
Confidence 99999999999999999999999999999998876543110 000111245567888887766 67788999999999
Q ss_pred HHHHHHh
Q 008643 339 LEAIWQN 345 (558)
Q Consensus 339 l~~l~~~ 345 (558)
+++++.+
T Consensus 197 l~~l~~g 203 (330)
T cd07834 197 FAELLTR 203 (330)
T ss_pred HHHHHcC
Confidence 9999874
No 373
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.77 E-value=1.4e-19 Score=199.00 Aligned_cols=138 Identities=14% Similarity=0.094 Sum_probs=98.2
Q ss_pred CCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC------CCCHHHHHHHHHHHHHHHHHHCCceecCCCCCCE
Q 008643 201 KDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA------GIDVGGFLTVGVSAALRQLLEFGLFHGDPHPGNI 274 (558)
Q Consensus 201 ~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~------~~~~~~~~~~~v~~~L~~Lh~~Gi~H~DlhPgNI 274 (558)
.+.+.+.+-.++. .....+++||++.+ .+.+....... .......+..|++.||.|||++||+|||+||+||
T Consensus 221 ~HpnIv~l~~~~~-~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NI 298 (501)
T PHA03210 221 NHENILKIEEILR-SEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENI 298 (501)
T ss_pred CCCCcCcEeEEEE-ECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHE
Confidence 3444333333332 24556899999865 33222111110 0112334778999999999999999999999999
Q ss_pred EEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHh
Q 008643 275 FAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 275 lv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~ 345 (558)
|++.+|.++|+|||++..+....... .....++..|++|+++..+.++..+|+|++|+.+++++.+
T Consensus 299 Ll~~~~~vkL~DFGla~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~ 364 (501)
T PHA03210 299 FLNCDGKIVLGDFGTAMPFEKEREAF-----DYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSH 364 (501)
T ss_pred EECCCCCEEEEeCCCceecCcccccc-----cccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHC
Confidence 99999999999999998775432110 0113478889999999888788899999999999999974
No 374
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.77 E-value=3.5e-19 Score=184.79 Aligned_cols=194 Identities=13% Similarity=0.135 Sum_probs=124.9
Q ss_pred eeeee--eccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 109 TIAAA--SLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 109 pIg~G--s~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.||.| ++|+||+|+++.+|+.||||+.+...... ... +.+.+|+
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~--~~~------------------------------~~~~~e~-- 50 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTE--EHL------------------------------KALQNEV-- 50 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCH--HHH------------------------------HHHHHHH--
Confidence 34555 99999999998899999999976532110 000 0111111
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHh-cCCCCHHH--HHHHHHHHHHHHHHHCC
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIK-GAGIDVGG--FLTVGVSAALRQLLEFG 263 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~-~~~~~~~~--~~~~~v~~~L~~Lh~~G 263 (558)
.....+.+.+.+.+..++. .....+++|||+.|+++.++.... ..+.+... .+..|++.+|.|||+.|
T Consensus 51 --------~~~~~l~h~niv~~~~~~~-~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ 121 (328)
T cd08226 51 --------VLSHFFRHPNIMTSWTVFT-TGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNG 121 (328)
T ss_pred --------HHHHhCCCCCcceEeeeEe-cCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 1222333333333333322 234569999999999987754332 12344433 46789999999999999
Q ss_pred ceecCCCCCCEEEecCCCeEEeecCcccccChhhHH-HHHHHHHHHHhcCHHHHHHHHHHcCC--CCCCCCcccHHHHHH
Q 008643 264 LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQ-ILIDAVVHAVNEDYAEMANDFTRLGF--LAKGTDVSPIIPALE 340 (558)
Q Consensus 264 i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~-~l~~~~~~~~~~d~~~~a~~~~~~g~--~~~~~Di~~l~~~l~ 340 (558)
++|+|+||+||+++.++.+++.|||.+......... ...............|++|+....+. +++.+|+|++|+.++
T Consensus 122 ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~ 201 (328)
T cd08226 122 YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITAC 201 (328)
T ss_pred eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHH
Confidence 999999999999999999999999865433221100 00000000112344588999986543 567899999999999
Q ss_pred HHHHh
Q 008643 341 AIWQN 345 (558)
Q Consensus 341 ~l~~~ 345 (558)
+++.+
T Consensus 202 el~~g 206 (328)
T cd08226 202 ELATG 206 (328)
T ss_pred HHHhC
Confidence 99874
No 375
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.77 E-value=1.2e-18 Score=181.47 Aligned_cols=190 Identities=17% Similarity=0.155 Sum_probs=130.4
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChh-----hHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEP-----IIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLL 181 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~-----~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~ 181 (558)
.++||+|++|.||+|+...+|+.||||..++.... ....++.+++.
T Consensus 10 ~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~----------------------------- 60 (337)
T cd07858 10 IKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRH----------------------------- 60 (337)
T ss_pred EEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHh-----------------------------
Confidence 46899999999999999889999999987653211 11112111111
Q ss_pred hhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHh-cCCCCHHHHHHHHHHHHHHHHH
Q 008643 182 EELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIK-GAGIDVGGFLTVGVSAALRQLL 260 (558)
Q Consensus 182 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~-~~~~~~~~~~~~~v~~~L~~Lh 260 (558)
+ .|+|+.++.+.+..... ......+++|||+++ .|.+..... ....+....+..+++.+|.+||
T Consensus 61 --l----~h~ni~~~~~~~~~~~~--------~~~~~~~lv~e~~~~-~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 125 (337)
T cd07858 61 --L----DHENVIAIKDIMPPPHR--------EAFNDVYIVYELMDT-DLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIH 125 (337)
T ss_pred --c----CCCCccchHHheecccc--------cccCcEEEEEeCCCC-CHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1 25666666665433210 111345999999974 554432211 1122333457789999999999
Q ss_pred HCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-CCCCCCCCcccHHHHH
Q 008643 261 EFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-GFLAKGTDVSPIIPAL 339 (558)
Q Consensus 261 ~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-g~~~~~~Di~~l~~~l 339 (558)
+.|++|+|+||.||+++.+|.++|+|||++......... . ....++..+++|+.... +..+..+|+|++|..+
T Consensus 126 ~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~--~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il 199 (337)
T cd07858 126 SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDF--M----TEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIF 199 (337)
T ss_pred hCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCccc--c----cccccccCccChHHHhcCCCCCCcccHHHHHHHH
Confidence 999999999999999999999999999998876543211 0 11124566888887764 4577889999999999
Q ss_pred HHHHHhh
Q 008643 340 EAIWQNS 346 (558)
Q Consensus 340 ~~l~~~~ 346 (558)
++++.+.
T Consensus 200 ~~l~~g~ 206 (337)
T cd07858 200 AELLGRK 206 (337)
T ss_pred HHHHcCC
Confidence 9998643
No 376
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.77 E-value=1.3e-18 Score=180.98 Aligned_cols=195 Identities=21% Similarity=0.197 Sum_probs=124.5
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||+|++|.||+|.++.+|+.||||........... ...+..|+
T Consensus 13 ~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~--------------------------------~~~~~~E~--- 57 (337)
T cd07852 13 QKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATD--------------------------------AQRTFREI--- 57 (337)
T ss_pred HhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchh--------------------------------hhhhhHHH---
Confidence 6899999999999999888999999976432111000 00011111
Q ss_pred HHHHHHHHHHHhc-CCCCCeeeceeeecC-CCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHCCce
Q 008643 188 LEARNMEDFLENF-KDDPTVKIPRVYKRL-SGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGLF 265 (558)
Q Consensus 188 ~Ea~n~~~~~~~~-~~~~~v~vP~v~~~~-~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi~ 265 (558)
. ....+ .+.+.+.+..++... ....+++|||++| +|.+..............+..+++.+|.+||+.|++
T Consensus 58 ---~----~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i~ 129 (337)
T cd07852 58 ---M----FLQELGDHPNIVKLLNVIKAENDKDIYLVFEYMET-DLHAVIRANILEDVHKRYIMYQLLKALKYIHSGNVI 129 (337)
T ss_pred ---H----HHHHhcCCCCccceeeeeccCCCceEEEEeccccc-CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 1 11122 122222222222211 2245899999985 554432211112222344778999999999999999
Q ss_pred ecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHH-cCCCCCCCCcccHHHHHHHHHH
Q 008643 266 HGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTR-LGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 266 H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~-~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
|+|+||+||+++.+|.++++|||++..+.......-.. ......++..|++|+... .+..+..+|+|++|..++++++
T Consensus 130 H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~t 208 (337)
T cd07852 130 HRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENP-VLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLL 208 (337)
T ss_pred cCCCCHHHEEEcCCCcEEEeeccchhccccccccccCc-chhcccccccccCceeeeccccccccchHHHHHHHHHHHHh
Confidence 99999999999999999999999998765432110000 001123566788888654 3556778999999999999997
Q ss_pred hh
Q 008643 345 NS 346 (558)
Q Consensus 345 ~~ 346 (558)
+.
T Consensus 209 g~ 210 (337)
T cd07852 209 GK 210 (337)
T ss_pred CC
Confidence 53
No 377
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.77 E-value=1.9e-18 Score=174.46 Aligned_cols=184 Identities=18% Similarity=0.206 Sum_probs=129.4
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||+|++|.||+|+.+.+|+.|+||..+..... . .+... .+|++..
T Consensus 5 ~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-~-~~~~~-------------------------------~~e~~~l 51 (283)
T cd07830 5 KQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS-W-EECMN-------------------------------LREVKSL 51 (283)
T ss_pred eeeccCCceEEEEEEECCCCcEEEEEEehhhccc-h-hHHHH-------------------------------HHHHHHH
Confidence 5799999999999999878999999987543221 0 00000 0111111
Q ss_pred ---HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCH--HHHHHHHHHHHHHHHHH
Q 008643 188 ---LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDV--GGFLTVGVSAALRQLLE 261 (558)
Q Consensus 188 ---~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~--~~~~~~~v~~~L~~Lh~ 261 (558)
.+|+|+.++...+.+... .+++|||+ ++++.+...... ..++. ...+..+++.++.|||+
T Consensus 52 ~~~~~h~~i~~~~~~~~~~~~-------------~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~ 117 (283)
T cd07830 52 RKLNEHPNIVKLKEVFRENDE-------------LYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHK 117 (283)
T ss_pred HhccCCCCchhHHHHhhcCCc-------------EEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 126677777777665443 48999999 556655433222 12333 34467889999999999
Q ss_pred CCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHH-cCCCCCCCCcccHHHHHH
Q 008643 262 FGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTR-LGFLAKGTDVSPIIPALE 340 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~-~g~~~~~~Di~~l~~~l~ 340 (558)
+|++|+|+||+||+++.++.++++|||.+..+....... ...++..+++|+... ....+..+|+|++|..++
T Consensus 118 ~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~-------~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~ 190 (283)
T cd07830 118 HGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYT-------DYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMA 190 (283)
T ss_pred CCcccCCCChhhEEEcCCCCEEEeecccceeccCCCCcC-------CCCCcccccCceeeecCcCcCCccchhhHHHHHH
Confidence 999999999999999999999999999998765432210 012456678888664 345678899999999999
Q ss_pred HHHHh
Q 008643 341 AIWQN 345 (558)
Q Consensus 341 ~l~~~ 345 (558)
+++++
T Consensus 191 el~~g 195 (283)
T cd07830 191 ELYTL 195 (283)
T ss_pred HHHhC
Confidence 99985
No 378
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.77 E-value=1.3e-18 Score=182.12 Aligned_cols=167 Identities=18% Similarity=0.224 Sum_probs=108.2
Q ss_pred cceeeeeeccEEEEEEEcC-CCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhc
Q 008643 107 SQTIAAASLGQVYRATLRE-TGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELD 185 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~-~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld 185 (558)
.+.||+|+||+||+|+++. +|+.||||+..+.... ...+ .....
T Consensus 23 ~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~-~~~~----------------------------~~~~~------ 67 (365)
T PRK09188 23 TAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPW-WSKP----------------------------LARHL------ 67 (365)
T ss_pred ccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccc-cccH----------------------------HHHHH------
Confidence 4789999999999999865 6788899986533110 0000 00011
Q ss_pred HHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHCCce
Q 008643 186 YTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGLF 265 (558)
Q Consensus 186 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi~ 265 (558)
+.+|...+.++ .+.+. +|.++. .+..+|+|||++|++|... ...+ ...+..+++.+|.|||+.|++
T Consensus 68 ~~~E~~iL~~L----~h~~i--v~~l~~--~~~~~LVmE~~~G~~L~~~---~~~~---~~~~~~~i~~aL~~lH~~gIi 133 (365)
T PRK09188 68 AAREIRALKTV----RGIGV--VPQLLA--TGKDGLVRGWTEGVPLHLA---RPHG---DPAWFRSAHRALRDLHRAGIT 133 (365)
T ss_pred HHHHHHHHHhc----cCCCC--CcEEEE--cCCcEEEEEccCCCCHHHh---Cccc---hHHHHHHHHHHHHHHHHCCCe
Confidence 23334433333 33332 355554 3567999999999888521 1111 134677899999999999999
Q ss_pred ecCC-CCCCEEEecCCCeEEeecCcccccChhhHHHHHH--HHHHHHhcCHHHHHHHHHH
Q 008643 266 HGDP-HPGNIFAMRDGRIAYVDFGNVAELSQQNKQILID--AVVHAVNEDYAEMANDFTR 322 (558)
Q Consensus 266 H~Dl-hPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~--~~~~~~~~d~~~~a~~~~~ 322 (558)
|||+ ||+||+++.+|+++|+|||+++.+.......... .=+..+.+++.+++|+...
T Consensus 134 HrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~ 193 (365)
T PRK09188 134 HNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALT 193 (365)
T ss_pred eCCCCCcceEEEcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCC
Confidence 9999 9999999999999999999999886643222110 0012344555566665543
No 379
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.77 E-value=3.9e-19 Score=179.22 Aligned_cols=190 Identities=20% Similarity=0.203 Sum_probs=126.3
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||+|++|.||+|+...+|+.||||+.+...... ++... +.
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~--------------------------------~~~~~------~~ 46 (287)
T cd07840 5 AQIGEGTYGQVYKARNKKTGELVALKKIRMENEKE--------------------------------GFPIT------AI 46 (287)
T ss_pred EEeccCCCeEEEEEEECCCCeEEEEEEEecccccc--------------------------------cchHH------HH
Confidence 57999999999999998889999999987643110 00001 11
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecC-CCceEEEEeeeCCCCCCCHHHHhcCCCCH--HHHHHHHHHHHHHHHHHCCc
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRL-SGSRVLVMEWIDGIRCTDPQAIKGAGIDV--GGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~vLvmE~i~G~~L~d~~~~~~~~~~~--~~~~~~~v~~~L~~Lh~~Gi 264 (558)
.|...+. .+.+.+.+.+..++... ....+++|||+++ ++.+.........+. ...+..+++.++.+||..|+
T Consensus 47 ~e~~~l~----~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~ 121 (287)
T cd07840 47 REIKLLQ----KLRHPNIVRLKEIVTSKGKGSIYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGI 121 (287)
T ss_pred HHHHHHH----hccCCCeeeheeeEecCCCCcEEEEeccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 1111111 11222223233333222 2567999999986 554433222123333 34577889999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-CCCCCCCCcccHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-GFLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-g~~~~~~Di~~l~~~l~~l~ 343 (558)
+|+|+||+||+++.+|.++++|||++..+........ ....++..+++|+.... ...++.+|+|++|..+++++
T Consensus 122 ~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~-----~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~ 196 (287)
T cd07840 122 LHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADY-----TNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELF 196 (287)
T ss_pred eeccCcHHHeEEcCCCCEEEccccceeeccCCCcccc-----cccccccccCCceeeEccccCChHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999987765432110 01123556788886542 34577899999999999999
Q ss_pred Hh
Q 008643 344 QN 345 (558)
Q Consensus 344 ~~ 345 (558)
++
T Consensus 197 t~ 198 (287)
T cd07840 197 LG 198 (287)
T ss_pred hC
Confidence 75
No 380
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.77 E-value=3e-19 Score=185.66 Aligned_cols=206 Identities=16% Similarity=0.077 Sum_probs=125.0
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||+|++|.||+|+++.+|+.||||+.+.........+ .+. .+.+. ..+.++.
T Consensus 15 ~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~---~~~-------------------~~~~~----~~~~~~~ 68 (335)
T PTZ00024 15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTK---DRQ-------------------LVGMC----GIHFTTL 68 (335)
T ss_pred hcccCCCceeEEEEEECCCCCeEEEEEeecccccccccc---chh-------------------hhccc----ccchhHH
Confidence 579999999999999988999999998764321110000 000 00000 0000111
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHh-cCCCCHHHHHHHHHHHHHHHHHHCCcee
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIK-GAGIDVGGFLTVGVSAALRQLLEFGLFH 266 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~-~~~~~~~~~~~~~v~~~L~~Lh~~Gi~H 266 (558)
.|.. ....+.+...+.+...+ ......+++|||++| ++.+..... .........+..+++.++.+||+.|++|
T Consensus 69 ~E~~----~l~~l~h~~iv~~~~~~-~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H 142 (335)
T PTZ00024 69 RELK----IMNEIKHENIMGLVDVY-VEGDFINLVMDIMAS-DLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMH 142 (335)
T ss_pred HHHH----HHHhCCCcceeeeeEEE-ecCCcEEEEEecccc-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 2222 12222233223222222 224556899999986 554432211 1123334457789999999999999999
Q ss_pred cCCCCCCEEEecCCCeEEeecCcccccChhhHHH--------HHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcccHHH
Q 008643 267 GDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQI--------LIDAVVHAVNEDYAEMANDFTRLG-FLAKGTDVSPIIP 337 (558)
Q Consensus 267 ~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~--------l~~~~~~~~~~d~~~~a~~~~~~g-~~~~~~Di~~l~~ 337 (558)
+|+||+||+++.+|.++++|||++.......... ..........++..+++|+....+ ..+..+|+|++|+
T Consensus 143 ~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~ 222 (335)
T PTZ00024 143 RDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGC 222 (335)
T ss_pred ccccHHHeEECCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHH
Confidence 9999999999999999999999997665110000 000000011234557788876543 3567789999999
Q ss_pred HHHHHHHh
Q 008643 338 ALEAIWQN 345 (558)
Q Consensus 338 ~l~~l~~~ 345 (558)
.+++++++
T Consensus 223 ~l~el~tg 230 (335)
T PTZ00024 223 IFAELLTG 230 (335)
T ss_pred HHHHHHhC
Confidence 99999984
No 381
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.77 E-value=2.3e-18 Score=167.83 Aligned_cols=177 Identities=28% Similarity=0.339 Sum_probs=130.4
Q ss_pred eccEEEEEEEcCCCcEEEEEEecCCChh----hHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHHHH
Q 008643 114 SLGQVYRATLRETGEDVAIKVQRPGIEP----IIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYTLE 189 (558)
Q Consensus 114 s~GqVy~a~~~~~G~~VAVKv~rp~~~~----~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~~E 189 (558)
+||+||+|+...+|+.||+|+.+..... .+..++..++. + .
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~-------------------------------l----~ 45 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKK-------------------------------L----K 45 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHh-------------------------------C----C
Confidence 5899999999778999999998765432 12222211111 1 2
Q ss_pred HHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC-CCCHHHHHHHHHHHHHHHHHHCCceecC
Q 008643 190 ARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA-GIDVGGFLTVGVSAALRQLLEFGLFHGD 268 (558)
Q Consensus 190 a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~-~~~~~~~~~~~v~~~L~~Lh~~Gi~H~D 268 (558)
++|+.++.+.+... ...+++|||+++++|.+....... .......+..+++.++.+||..|++|+|
T Consensus 46 ~~~i~~~~~~~~~~-------------~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~ 112 (244)
T smart00220 46 HPNIVRLYDVFEDE-------------DKLYLVMEYCDGGDLFDLLKKRGRLSEDEARFYARQILSALEYLHSNGIIHRD 112 (244)
T ss_pred CCcHHHHHhheeeC-------------CEEEEEEeCCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCC
Confidence 56666666554432 445899999999988775433221 2222334667899999999999999999
Q ss_pred CCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHh
Q 008643 269 PHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 269 lhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~ 345 (558)
++|.||+++.++.++++|||.+..+..... .....+.+.+++|+....+..++..|+|++|..+++++.+
T Consensus 113 i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~-------~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~ 182 (244)
T smart00220 113 LKPENILLDEDGHVKLADFGLARQLDPGGL-------LTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTG 182 (244)
T ss_pred cCHHHeEECCCCcEEEccccceeeeccccc-------cccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhC
Confidence 999999999999999999999988766431 1123467778899998888888899999999999999974
No 382
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.77 E-value=1.6e-18 Score=181.93 Aligned_cols=234 Identities=18% Similarity=0.207 Sum_probs=149.7
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||+|+-+.||++.. .+.+-+|+|...-. ..|-. .+ .. |.
T Consensus 367 k~iG~GGSSkV~kV~~-s~~~iyalkkv~~~-----~~D~q-----------------------tl----~g------y~ 407 (677)
T KOG0596|consen 367 KQIGSGGSSKVFKVLN-SDKQIYALKKVVLL-----EADNQ-----------------------TL----DG------YR 407 (677)
T ss_pred HhhcCCCcceeeeeec-CCCcchhhhHHHHh-----hcCHH-----------------------HH----HH------HH
Confidence 6899999999999998 56677777642110 00100 01 11 23
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCC--HHHHHHHHHHHHHHHHHHCCce
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGID--VGGFLTVGVSAALRQLLEFGLF 265 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~--~~~~~~~~v~~~L~~Lh~~Gi~ 265 (558)
+|-.- ..-++++..|.--..|.-..+..||||||=+ .+|..+...+..... ..+.|..|++.+++++|++||+
T Consensus 408 nEI~l----L~KLkg~~~IIqL~DYEv~d~~lYmvmE~Gd-~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIV 482 (677)
T KOG0596|consen 408 NEIAL----LNKLKGHDKIIQLYDYEVTDGYLYMVMECGD-IDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIV 482 (677)
T ss_pred HHHHH----HHHhcCCceEEEEeeeeccCceEEEEeeccc-ccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhcee
Confidence 33333 3333444444333334444677899999854 455554333333233 4577899999999999999999
Q ss_pred ecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCC-----------CCCCCCccc
Q 008643 266 HGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGF-----------LAKGTDVSP 334 (558)
Q Consensus 266 H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~-----------~~~~~Di~~ 334 (558)
|.|+||.|+++ -.|++||||||++..+.+++...+-+. -.|++.||+|+.+...- +++.+|+|+
T Consensus 483 HSDLKPANFLl-VkG~LKLIDFGIA~aI~~DTTsI~kds----QvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWS 557 (677)
T KOG0596|consen 483 HSDLKPANFLL-VKGRLKLIDFGIANAIQPDTTSIVKDS----QVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWS 557 (677)
T ss_pred ecCCCcccEEE-EeeeEEeeeechhcccCccccceeecc----ccCcccccCHHHHhhccccccCCCcceeecCccchhh
Confidence 99999999998 679999999999999988776543332 35799999988765321 457789999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHh-cCCC---Cchh--HHHHHHHHHHHHhhhhhcCCCCCh
Q 008643 335 IIPALEAIWQNSSGKGLADFNFRSVTGQFNKLVYN-YRIR---IPER--FSLVIRSLLTQEGICFTLKPDFKF 401 (558)
Q Consensus 335 l~~~l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~---lP~~--~~~~~rsl~~legi~~~LdP~~~~ 401 (558)
+||+||.|.-+ ..|+.. +......+..++.- +.+. +|++ +..++|. |+..||+-++
T Consensus 558 LGCILYqMvYg--ktPf~~--~~n~~aKl~aI~~P~~~Iefp~~~~~~~li~~mK~-------CL~rdPkkR~ 619 (677)
T KOG0596|consen 558 LGCILYQMVYG--KTPFGQ--IINQIAKLHAITDPNHEIEFPDIPENDELIDVMKC-------CLARDPKKRW 619 (677)
T ss_pred hhhHHHHHHhc--CCchHH--HHHHHHHHHhhcCCCccccccCCCCchHHHHHHHH-------HHhcCcccCC
Confidence 99999999852 222222 23344555544421 2222 3343 3334443 7788887664
No 383
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.77 E-value=9e-18 Score=159.87 Aligned_cols=170 Identities=26% Similarity=0.352 Sum_probs=112.2
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
++||+|++|+||+|+. .+|++||||+.+++.......+..++... ... ....+...+ ......
T Consensus 3 ~~lg~G~~g~Vy~a~~-~~~~~vavKv~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~---------~~~~~~ 65 (187)
T cd05119 3 GPIGTGKEADVYLALD-GDGEPVAVKIYRTGRTSFKKRKRYRTGDY---RFG----RKKSNWRYL---------SRLWAE 65 (187)
T ss_pred cccccccceeEEEEEC-CCCCEEEEEEEecCccchhhhhhhhHHHH---Hhc----cCCcchhhh---------hhHHHH
Confidence 5799999999999998 48999999999886543222221111000 000 000111111 111123
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCC-CHHHHHHHHHHHHHHHHHH-CCce
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGI-DVGGFLTVGVSAALRQLLE-FGLF 265 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~-~~~~~~~~~v~~~L~~Lh~-~Gi~ 265 (558)
.|++++.++... .+.+|+++. +...+++|||++|+.+... .+..... +....+..++..++.++|. .|++
T Consensus 66 ~e~~~l~~l~~~-----~~~~~~~~~--~~~~~lv~e~~~g~~~~~~-~l~~~~~~~~~~~~~~~~~~~l~~lh~~~~iv 137 (187)
T cd05119 66 KEFRNLKRLYEA-----GVPVPKPID--LNRHVLVMEFIGGDGIPAP-RLKDVRLLEDPEELYDQILELMRKLYREAGLV 137 (187)
T ss_pred HHHHHHHHHHHc-----CCCCCceEe--cCCCEEEEEEeCCCCccCh-hhhhhhhcccHHHHHHHHHHHHHHHhhccCcC
Confidence 566777676543 355677765 3456999999999544321 1111111 4455677889999999999 9999
Q ss_pred ecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHH
Q 008643 266 HGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILID 303 (558)
Q Consensus 266 H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~ 303 (558)
|+|+||+||+++ ++.++++|||++.....+....+.+
T Consensus 138 H~Dl~p~Nili~-~~~~~liDfg~a~~~~~~~~~~~~~ 174 (187)
T cd05119 138 HGDLSEYNILVD-DGKVYIIDVPQAVEIDHPNAEEFLR 174 (187)
T ss_pred cCCCChhhEEEE-CCcEEEEECcccccccCcchHHHHH
Confidence 999999999999 9999999999999888766665443
No 384
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.77 E-value=6.7e-18 Score=170.17 Aligned_cols=187 Identities=17% Similarity=0.167 Sum_probs=124.1
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||.|++|+||+|+.+.+|+.||||+.+......... ....|+
T Consensus 5 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~---------------------------------~~~~e~--- 48 (282)
T cd07831 5 GKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQV---------------------------------NNLREI--- 48 (282)
T ss_pred eeccccccceEEEEEEcCCCcEEEEEEehhccCCchhh---------------------------------hHHHHH---
Confidence 57999999999999998899999999876532110000 000111
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecC-CCceEEEEeeeCCCCCCCHHHHhcCCCCH--HHHHHHHHHHHHHHHHHCCc
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRL-SGSRVLVMEWIDGIRCTDPQAIKGAGIDV--GGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~vLvmE~i~G~~L~d~~~~~~~~~~~--~~~~~~~v~~~L~~Lh~~Gi 264 (558)
. .+.....+.+.+.+...+.+. .+..+++|||++| ++.+.........+. ...+..+++.+|.+||..|+
T Consensus 49 ---~---~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i 121 (282)
T cd07831 49 ---Q---ALRRLSPHPNILRLIEVLFDRKTGRLALVFELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGI 121 (282)
T ss_pred ---H---HHhhcCCCCCccceEEEEecCCCCcEEEEEecCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 1 111111122223333333321 2567999999986 444332221222333 34567899999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHH-cCCCCCCCCcccHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTR-LGFLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~-~g~~~~~~Di~~l~~~l~~l~ 343 (558)
+|+|++|.||+++. |.++++|||++..+....... ...++..|++|+... .+..+..+|+|++|+.+++++
T Consensus 122 ~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~ 193 (282)
T cd07831 122 FHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYT-------EYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEIL 193 (282)
T ss_pred eecccCHHHEEEcC-CCeEEEecccccccccCCCcC-------CCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHH
Confidence 99999999999999 999999999998764332110 012456788888654 456778899999999999999
Q ss_pred Hh
Q 008643 344 QN 345 (558)
Q Consensus 344 ~~ 345 (558)
.+
T Consensus 194 ~~ 195 (282)
T cd07831 194 SL 195 (282)
T ss_pred cC
Confidence 74
No 385
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.76 E-value=2.7e-18 Score=183.84 Aligned_cols=238 Identities=18% Similarity=0.198 Sum_probs=161.4
Q ss_pred ceeeeeeccEEEEEEEcCC-Cc--EEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhh
Q 008643 108 QTIAAASLGQVYRATLRET-GE--DVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEEL 184 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~-G~--~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~El 184 (558)
|.||+|+||.|++|.++.. |. .||||+.+++....+..
T Consensus 116 e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~md--------------------------------------- 156 (1039)
T KOG0199|consen 116 ELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMD--------------------------------------- 156 (1039)
T ss_pred HHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHH---------------------------------------
Confidence 5789999999999998643 33 69999999875443222
Q ss_pred cHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHH-hcCCCCHH--HHHHHHHHHHHHHHHH
Q 008643 185 DYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAI-KGAGIDVG--GFLTVGVSAALRQLLE 261 (558)
Q Consensus 185 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~-~~~~~~~~--~~~~~~v~~~L~~Lh~ 261 (558)
||++|+..+.++ .|...|+...++. .....+|||.+++|+|.+.... .+..+-.. ..|..||+.|+.||..
T Consensus 157 dflrEas~M~~L----~H~hliRLyGvVl--~qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLes 230 (1039)
T KOG0199|consen 157 DFLREASHMLKL----QHPHLIRLYGVVL--DQPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLES 230 (1039)
T ss_pred HHHHHHHHHHhc----cCcceeEEeeeec--cchhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhh
Confidence 234444444333 2222232222222 2444799999999999775433 11222222 3478899999999999
Q ss_pred CCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHH
Q 008643 262 FGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEA 341 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~ 341 (558)
.+++|||+-..|+++-....|||+|||+++.+......... ..-..=-+.+.||+.++.+.++..+|+|.+|++|++
T Consensus 231 krlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm---~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWE 307 (1039)
T KOG0199|consen 231 KRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVM---APQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWE 307 (1039)
T ss_pred hhhhhhhhhhhhheecccceeeeecccceeccCCCCcceEe---cCCCcCcccccCHhHhccccccccchhhhhhhhHHh
Confidence 99999999999999999889999999999998764332100 000112467889999999999999999999999999
Q ss_pred HHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 342 IWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 342 l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
||+. ...++...+-..++..+.+ +..+.-|++....|-+++.. |+.-+|.-+
T Consensus 308 MFty-GEePW~G~~g~qIL~~iD~---~erLpRPk~csedIY~imk~---cWah~paDR 359 (1039)
T KOG0199|consen 308 MFTY-GEEPWVGCRGIQILKNIDA---GERLPRPKYCSEDIYQIMKN---CWAHNPADR 359 (1039)
T ss_pred hhcc-CCCCCCCCCHHHHHHhccc---cccCCCCCCChHHHHHHHHH---hccCCcccc
Confidence 9973 3445555555566555442 22333445555555555544 888888765
No 386
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.76 E-value=1.3e-18 Score=177.87 Aligned_cols=198 Identities=16% Similarity=0.153 Sum_probs=128.9
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChh-----hHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEP-----IIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLL 181 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~-----~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~ 181 (558)
.+.||+|++|.||+|+.+.+|+.||||+....... ...+++.+++.+
T Consensus 13 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l---------------------------- 64 (311)
T cd07866 13 LGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKL---------------------------- 64 (311)
T ss_pred EEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhc----------------------------
Confidence 46899999999999999889999999987543211 122222222211
Q ss_pred hhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCC--HHHHHHHHHHHHHHHH
Q 008643 182 EELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGID--VGGFLTVGVSAALRQL 259 (558)
Q Consensus 182 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~--~~~~~~~~v~~~L~~L 259 (558)
.|+|+.++.+.+...... ........+++|||+++. +...........+ ....+..+++.+|.||
T Consensus 65 -------~h~~i~~~~~~~~~~~~~-----~~~~~~~~~lv~~~~~~~-l~~~~~~~~~~~~~~~~~~i~~~l~~al~~l 131 (311)
T cd07866 65 -------KHPNVVPLIDMAVERPDK-----SKRKRGSVYMVTPYMDHD-LSGLLENPSVKLTESQIKCYMLQLLEGINYL 131 (311)
T ss_pred -------CCCCccchhhheeccccc-----ccccCceEEEEEecCCcC-HHHHHhccccCCCHHHHHHHHHHHHHHHHHH
Confidence 155665555544322110 011123458999999763 3222111111223 3345778999999999
Q ss_pred HHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHH-----HHHHHHhcCHHHHHHHHHHcC-CCCCCCCcc
Q 008643 260 LEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILID-----AVVHAVNEDYAEMANDFTRLG-FLAKGTDVS 333 (558)
Q Consensus 260 h~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~-----~~~~~~~~d~~~~a~~~~~~g-~~~~~~Di~ 333 (558)
|..|++|+|+||+||+++.+|.++++|||++............. .......++..|++|+....+ ..+..+|+|
T Consensus 132 H~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~ 211 (311)
T cd07866 132 HENHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIW 211 (311)
T ss_pred HhCCeecCCCCHHHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhH
Confidence 99999999999999999999999999999998664322110000 000111245668899987643 467789999
Q ss_pred cHHHHHHHHHHh
Q 008643 334 PIIPALEAIWQN 345 (558)
Q Consensus 334 ~l~~~l~~l~~~ 345 (558)
++|..+++++.+
T Consensus 212 slG~il~el~~g 223 (311)
T cd07866 212 GIGCVFAEMFTR 223 (311)
T ss_pred HHHHHHHHHHhC
Confidence 999999999975
No 387
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.76 E-value=2e-18 Score=179.37 Aligned_cols=194 Identities=18% Similarity=0.144 Sum_probs=125.0
Q ss_pred cceeeeeeccEEEEEEEcCC--CcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhh
Q 008643 107 SQTIAAASLGQVYRATLRET--GEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEEL 184 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~--G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~El 184 (558)
.+.||+|++|.||+|+.+.+ |..||||+.+....... ..+.+..|+
T Consensus 5 ~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~--------------------------------~~~~~~~E~ 52 (332)
T cd07857 5 IKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKI--------------------------------LAKRALREL 52 (332)
T ss_pred EEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccch--------------------------------hHHHHHHHH
Confidence 36799999999999999777 88999998764321100 000111121
Q ss_pred cHH---HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCC--HHHHHHHHHHHHHHHH
Q 008643 185 DYT---LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGID--VGGFLTVGVSAALRQL 259 (558)
Q Consensus 185 d~~---~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~--~~~~~~~~v~~~L~~L 259 (558)
+.. ..|+|+.++..... .........+++|||+++ +|.+... .....+ ....+..|++.+|.+|
T Consensus 53 ~~l~~l~~h~~iv~~~~~~~---------~~~~~~~~~~~~~e~~~~-~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~L 121 (332)
T cd07857 53 KLLRHFRGHKNITCLYDMDI---------VFPGNFNELYLYEELMEA-DLHQIIR-SGQPLTDAHFQSFIYQILCGLKYI 121 (332)
T ss_pred HHHHHhcCCCChheeeeeee---------eccccCCcEEEEEecccC-CHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHH
Confidence 111 12344443322110 001112345899999864 5544321 122233 3345778999999999
Q ss_pred HHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcccHHHH
Q 008643 260 LEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLG-FLAKGTDVSPIIPA 338 (558)
Q Consensus 260 h~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g-~~~~~~Di~~l~~~ 338 (558)
|..|++|+|+||+||+++.+|.++|+|||++..+......... ......++..|++|+....+ ..+..+|+|++|..
T Consensus 122 H~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~ 199 (332)
T cd07857 122 HSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAG--FMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCI 199 (332)
T ss_pred HhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccccccccc--cccCcccCccccCcHHHhCCCCCCcHHHHHHHHHH
Confidence 9999999999999999999999999999999876543221000 00112356778999977543 45678999999999
Q ss_pred HHHHHHh
Q 008643 339 LEAIWQN 345 (558)
Q Consensus 339 l~~l~~~ 345 (558)
+++++.+
T Consensus 200 l~~l~~g 206 (332)
T cd07857 200 LAELLGR 206 (332)
T ss_pred HHHHHhC
Confidence 9999864
No 388
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.75 E-value=8.8e-19 Score=184.41 Aligned_cols=190 Identities=23% Similarity=0.246 Sum_probs=141.9
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
-+|+|.|.||+|..|+++++..+|+||.+... +|-.|- |+. -.++| ++..|+..
T Consensus 566 lq~lG~GAyGkV~lai~K~n~~eVViK~I~Ke---RIL~Dt--------Wvr---DrkLG------------tVp~EIqI 619 (772)
T KOG1152|consen 566 LQPLGEGAYGKVNLAIHKENNYEVVIKMIFKE---RILVDT--------WVR---DRKLG------------TVPSEIQI 619 (772)
T ss_pred eeeccccccceEEEeeecccceEEEeeehhhh---hhhhhh--------hhc---ccccC------------ccchhHHH
Confidence 57999999999999999999999999987543 111110 000 00111 11222222
Q ss_pred H-----HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeee-CCCCCCCHHHHhcC-CCCHHHHHHHHHHHHHHHH
Q 008643 187 T-----LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWI-DGIRCTDPQAIKGA-GIDVGGFLTVGVSAALRQL 259 (558)
Q Consensus 187 ~-----~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i-~G~~L~d~~~~~~~-~~~~~~~~~~~v~~~L~~L 259 (558)
. +-|+|+.++...|+++.++ ||+||-- +|.+|.+++..+.. .+..++.++.||..+++.|
T Consensus 620 la~l~~~sH~NIlKlLdfFEddd~y-------------yl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hl 686 (772)
T KOG1152|consen 620 LATLNKHSHENILKLLDFFEDDDYY-------------YLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHL 686 (772)
T ss_pred HHHhhhcCccchhhhhheeecCCee-------------EEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccc
Confidence 1 1389999999999998877 8999853 56777777655433 4566788999999999999
Q ss_pred HHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcccHHHH
Q 008643 260 LEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLG-FLAKGTDVSPIIPA 338 (558)
Q Consensus 260 h~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g-~~~~~~Di~~l~~~ 338 (558)
|..||+|||+|-+|++++.+|-++++|||.+.......- -.+.|+.+|.||+++... +.....|+|++|..
T Consensus 687 h~~~ivhrdikdenvivd~~g~~klidfgsaa~~ksgpf--------d~f~gtv~~aapevl~g~~y~gk~qdiwalgil 758 (772)
T KOG1152|consen 687 HDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSGPF--------DVFVGTVDYAAPEVLGGEKYLGKPQDIWALGIL 758 (772)
T ss_pred cccCceecccccccEEEecCCeEEEeeccchhhhcCCCc--------ceeeeeccccchhhhCCCccCCCcchhhhhhhe
Confidence 999999999999999999999999999999876544322 234578899999998864 55677899999988
Q ss_pred HHHHH
Q 008643 339 LEAIW 343 (558)
Q Consensus 339 l~~l~ 343 (558)
||.+.
T Consensus 759 lytiv 763 (772)
T KOG1152|consen 759 LYTIV 763 (772)
T ss_pred eeEEE
Confidence 87654
No 389
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.75 E-value=3.8e-18 Score=165.09 Aligned_cols=188 Identities=23% Similarity=0.268 Sum_probs=127.4
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
++||+|++|+||+|....+++.|++|+.+..... ... .. +.
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~---~~~------------------------------~~------~~ 45 (225)
T smart00221 5 KKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE---KQR------------------------------EE------FL 45 (225)
T ss_pred eEeecCCCeEEEEEEEcCCCcEEEEEeeccccch---HHH------------------------------HH------HH
Confidence 6899999999999999777999999998765322 000 01 11
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCH--HHHHHHHHHHHHHHHHHCCce
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDV--GGFLTVGVSAALRQLLEFGLF 265 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~--~~~~~~~v~~~L~~Lh~~Gi~ 265 (558)
.|...+.++ .+...+.+.. +.......+++|||++|++|.+.........+. ...+..+++.++.++|..|++
T Consensus 46 ~e~~~~~~~----~~~~i~~~~~-~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~ 120 (225)
T smart00221 46 REIRILKKL----KHPNIVKLYG-VFEDPEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIV 120 (225)
T ss_pred HHHHHHHhC----CCCChhhhee-eeecCCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 111211111 1211111111 122235668999999999887764432211332 334667899999999999999
Q ss_pred ecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHH-HcCCCCCCCCcccHHHHHHHHHH
Q 008643 266 HGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFT-RLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 266 H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~-~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
|+|++|.|++++.+++++++|||.+..+...... ......+...+++|+.. .....++..|+|++|..+++++.
T Consensus 121 h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~-----~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~ 195 (225)
T smart00221 121 HRDLKPENILLGMDGLVKLADFGLARFIHRDLAA-----LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLW 195 (225)
T ss_pred cCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc-----cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHH
Confidence 9999999999999999999999999887654200 00111245567788877 55556678999999999999997
No 390
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.75 E-value=4e-19 Score=189.38 Aligned_cols=255 Identities=19% Similarity=0.208 Sum_probs=173.9
Q ss_pred hCCChHhhhcccCcceeeeeeccEEEEEEEcCCCcEEE---EEE----ecCCChhhHHHHHHHHHHHHHHhhhhhhhccC
Q 008643 94 LGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVA---IKV----QRPGIEPIIYRDLFLFRTLASFLNGISIQKLG 166 (558)
Q Consensus 94 lg~~~~~~f~~~~~~pIg~Gs~GqVy~a~~~~~G~~VA---VKv----~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~ 166 (558)
.+......|-.|+ +.||+|+|=.||+|.+..+|.+|| ||+ +.|.-.+++..++.+|+.+
T Consensus 33 ve~~p~gRy~k~~-evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL------------- 98 (632)
T KOG0584|consen 33 VEKDPTGRYLKFD-EVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSL------------- 98 (632)
T ss_pred cccCCCCceeehh-hhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccC-------------
Confidence 3455666777776 579999999999999988998887 342 1122223333333333322
Q ss_pred CChHHHHHHHHHhhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHh-cCCCCHH
Q 008643 167 CNAELIVDEFGEKLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIK-GAGIDVG 245 (558)
Q Consensus 167 ~~~~~iv~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~-~~~~~~~ 245 (558)
.|+|+.+|+..+.+... ....+++|.+.+|+|..+.... ..++...
T Consensus 99 ----------------------~H~NIirfy~SW~d~~n-----------~~in~iTEL~TSGtLr~Y~kk~~~vn~kai 145 (632)
T KOG0584|consen 99 ----------------------KHPNIIRFYDSWVDTDN-----------KTINFITELFTSGTLREYRKKHRRVNIKAI 145 (632)
T ss_pred ----------------------CCCceeeeeeheecCCC-----------ceeeeeeecccCCcHHHHHHHhccCCHHHH
Confidence 27888888777665433 2238999999999999875432 2244455
Q ss_pred HHHHHHHHHHHHHHHHC--CceecCCCCCCEEEec-CCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHH
Q 008643 246 GFLTVGVSAALRQLLEF--GLFHGDPHPGNIFAMR-DGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTR 322 (558)
Q Consensus 246 ~~~~~~v~~~L~~Lh~~--Gi~H~DlhPgNIlv~~-dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~ 322 (558)
+.|.+||+.||.|||.+ -|+|||+|-.||||+- .|.|||.|.|++..+...... .+-|+++.|||+++.
T Consensus 146 k~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~ak--------svIGTPEFMAPEmYE 217 (632)
T KOG0584|consen 146 KSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAK--------SVIGTPEFMAPEMYE 217 (632)
T ss_pred HHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccccc--------eeccCccccChHHHh
Confidence 67999999999999987 4999999999999985 499999999999876554322 245899999999999
Q ss_pred cCCCCCCCCcccHHHHHHHHHHhhcCCCCCCC-CHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCCh
Q 008643 323 LGFLAKGTDVSPIIPALEAIWQNSSGKGLADF-NFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKF 401 (558)
Q Consensus 323 ~g~~~~~~Di~~l~~~l~~l~~~~~~~~~~~~-~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~~ 401 (558)
.-+...+|+|+||.++.+|.+.-+ |+..- +. .++++.+... .-|..|. ..-||
T Consensus 218 -E~YnE~VDVYaFGMCmLEMvT~eY--PYsEC~n~----AQIYKKV~SG--iKP~sl~-------------kV~dP---- 271 (632)
T KOG0584|consen 218 -ENYNELVDVYAFGMCMLEMVTSEY--PYSECTNP----AQIYKKVTSG--IKPAALS-------------KVKDP---- 271 (632)
T ss_pred -hhcchhhhhhhhhHHHHHHHhccC--ChhhhCCH----HHHHHHHHcC--CCHHHhh-------------ccCCH----
Confidence 445788999999999999987533 22221 22 3444444332 2344332 23355
Q ss_pred hHhhhHHHHHHhhcCC-CHHHHHHHHHHHhc
Q 008643 402 LEVAYPYVAKRLLTDP-NPALRERLIQVLFK 431 (558)
Q Consensus 402 ~~~a~p~v~~~ll~~~-~p~~r~~l~~~l~~ 431 (558)
.++-||.++|.... .+..++-|....|.
T Consensus 272 --evr~fIekCl~~~~~R~sa~eLL~d~Ff~ 300 (632)
T KOG0584|consen 272 --EVREFIEKCLATKSERLSAKELLKDPFFD 300 (632)
T ss_pred --HHHHHHHHHhcCchhccCHHHHhhChhhc
Confidence 56788888888722 23445555555553
No 391
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.74 E-value=7.7e-19 Score=180.15 Aligned_cols=187 Identities=20% Similarity=0.210 Sum_probs=124.1
Q ss_pred ceeeeeeccEEEEEEEcC--CCcEEEEEEecCCCh------hhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHh
Q 008643 108 QTIAAASLGQVYRATLRE--TGEDVAIKVQRPGIE------PIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEK 179 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~--~G~~VAVKv~rp~~~------~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~ 179 (558)
+.||+|++|.||+|..+. +|+.||||+.++... +...+++.+
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~------------------------------ 55 (316)
T cd07842 6 GCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIAL------------------------------ 55 (316)
T ss_pred EEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHH------------------------------
Confidence 569999999999999977 789999999876421 111111111
Q ss_pred hHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecC-CCceEEEEeeeCCCCCCCHHHHh-cC---CCCH--HHHHHHHH
Q 008643 180 LLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRL-SGSRVLVMEWIDGIRCTDPQAIK-GA---GIDV--GGFLTVGV 252 (558)
Q Consensus 180 l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~vLvmE~i~G~~L~d~~~~~-~~---~~~~--~~~~~~~v 252 (558)
...+.+.+.+.+...+... ....++||||+++ ++.+..... .. .++. ...+..|+
T Consensus 56 -----------------l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi 117 (316)
T cd07842 56 -----------------LRELKHENVVSLVEVFLEHADKSVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQI 117 (316)
T ss_pred -----------------HHhcCCCCccceEEEEeCCCCceEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHH
Confidence 1112232223333333221 2456999999986 333322111 11 1222 33567899
Q ss_pred HHHHHHHHHCCceecCCCCCCEEEec----CCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCC
Q 008643 253 SAALRQLLEFGLFHGDPHPGNIFAMR----DGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLG-FLA 327 (558)
Q Consensus 253 ~~~L~~Lh~~Gi~H~DlhPgNIlv~~----dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g-~~~ 327 (558)
+.++.|||+.|++|+|+||.||+++. +|.++++|||++..+......... .....++..|++|+.+..+ ..+
T Consensus 118 ~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~ 194 (316)
T cd07842 118 LNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLAD---LDPVVVTIWYRAPELLLGARHYT 194 (316)
T ss_pred HHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccc---cCCccccccccCHHHHhCCCCCC
Confidence 99999999999999999999999999 899999999998876543221000 0011245668899987653 456
Q ss_pred CCCCcccHHHHHHHHHHh
Q 008643 328 KGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 328 ~~~Di~~l~~~l~~l~~~ 345 (558)
..+|+|++|..+++++.+
T Consensus 195 ~~~Dv~slG~~l~~l~~~ 212 (316)
T cd07842 195 KAIDIWAIGCIFAELLTL 212 (316)
T ss_pred cHHHHHHHHHHHHHHHhc
Confidence 789999999999999874
No 392
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.74 E-value=1e-17 Score=182.07 Aligned_cols=234 Identities=17% Similarity=0.178 Sum_probs=172.2
Q ss_pred cceeeeeeccEEEEEEEcCCCc----EEEEEEecCCCh----hhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHH
Q 008643 107 SQTIAAASLGQVYRATLRETGE----DVAIKVQRPGIE----PIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGE 178 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~----~VAVKv~rp~~~----~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~ 178 (558)
.+.||+|.||.||+|.+-..|+ +|||||....-. ..+..|..+|.
T Consensus 701 ~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~ma--------------------------- 753 (1177)
T KOG1025|consen 701 DKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMA--------------------------- 753 (1177)
T ss_pred hceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHh---------------------------
Confidence 4689999999999999976675 789998764321 11222221111
Q ss_pred hhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHH--HHHHHHHHHH
Q 008643 179 KLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGG--FLTVGVSAAL 256 (558)
Q Consensus 179 ~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~--~~~~~v~~~L 256 (558)
..+|+|+.|+.+...... ..||++|+++|.|.|+...++..+-... .|..||..|+
T Consensus 754 --------sldHpnl~RLLgvc~~s~--------------~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM 811 (1177)
T KOG1025|consen 754 --------SLDHPNLLRLLGVCMLST--------------LQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGM 811 (1177)
T ss_pred --------cCCCchHHHHhhhcccch--------------HHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHH
Confidence 123899999988765432 3689999999999998777666554443 4778999999
Q ss_pred HHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHH
Q 008643 257 RQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPII 336 (558)
Q Consensus 257 ~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~ 336 (558)
.|||+++++|||+-..|+|+..-..+|+.|||+++.+.++..+..+. ...--..+||=+.+....+++.+|+|++|
T Consensus 812 ~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~~----~gK~pikwmale~i~~~~~thqSDVWsfG 887 (1177)
T KOG1025|consen 812 KYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAP----GGKVPIKWMALESIRIRKYTHQSDVWSFG 887 (1177)
T ss_pred HHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCccccccccc----ccccCcHHHHHHHhhccCCCchhhhhhhh
Confidence 99999999999999999999999999999999999998877664322 12235678898999999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 337 PALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 337 ~~l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
+.++++++ +...+...++..++-+-+.+ ...+.-||--...+-.++.- |+.+|++.+
T Consensus 888 VtiWElmT-FGa~Py~gi~~~eI~dlle~---geRLsqPpiCtiDVy~~mvk---Cwmid~~~r 944 (1177)
T KOG1025|consen 888 VTIWELMT-FGAKPYDGIPAEEIPDLLEK---GERLSQPPICTIDVYMVMVK---CWMIDADSR 944 (1177)
T ss_pred hhHHHHHh-cCCCccCCCCHHHhhHHHhc---cccCCCCCCccHHHHHHHHH---HhccCcccC
Confidence 99999987 44556666666655443221 12245566666555555554 788888766
No 393
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.74 E-value=8.1e-19 Score=179.38 Aligned_cols=245 Identities=16% Similarity=0.169 Sum_probs=155.2
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHH--HHhhHhhhc
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEF--GEKLLEELD 185 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~--~~~l~~Eld 185 (558)
..+|.|+|+.||+|.+....+-||||+-.-+- ..+.+- -+...... ...+..|+|
T Consensus 469 hLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK--~WrdEK---------------------KeNYhKHAcREyrIHKeLD 525 (775)
T KOG1151|consen 469 HLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNK--NWRDEK---------------------KENYHKHACREYRIHKELD 525 (775)
T ss_pred HHhccccHHHHHHhcccchhheeeEeeehhcc--chhhHh---------------------hhhHHHHHHHHHhhhhccC
Confidence 45899999999999997778899999864321 111100 00000000 113444444
Q ss_pred HHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC-CCCHHHHHHHHHHHHHHHHHHC--
Q 008643 186 YTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA-GIDVGGFLTVGVSAALRQLLEF-- 262 (558)
Q Consensus 186 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~-~~~~~~~~~~~v~~~L~~Lh~~-- 262 (558)
|+.++++++.|.- .+...+.|+|||+|.+|+-+....+. ....++.+..||..+|.||.+.
T Consensus 526 ----HpRIVKlYDyfsl------------DtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikp 589 (775)
T KOG1151|consen 526 ----HPRIVKLYDYFSL------------DTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKP 589 (775)
T ss_pred ----cceeeeeeeeeee------------ccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCC
Confidence 4444444433322 24556899999999999876544332 4556677888999999999975
Q ss_pred CceecCCCCCCEEEec---CCCeEEeecCcccccChhhHHHHHH-HHHHHHhcCHHHHHHHHHHcCC----CCCCCCccc
Q 008643 263 GLFHGDPHPGNIFAMR---DGRIAYVDFGNVAELSQQNKQILID-AVVHAVNEDYAEMANDFTRLGF----LAKGTDVSP 334 (558)
Q Consensus 263 Gi~H~DlhPgNIlv~~---dg~l~liDFGl~~~l~~~~~~~l~~-~~~~~~~~d~~~~a~~~~~~g~----~~~~~Di~~ 334 (558)
-|+|-|+||||||+-. -|.+||.|||+++.++++.-..... -+..-..|+|-|++|+.+-.|. ++.++|+|+
T Consensus 590 PIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWS 669 (775)
T KOG1151|consen 590 PIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWS 669 (775)
T ss_pred CeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEe
Confidence 6999999999999954 3789999999999887654331111 1122356899999999887774 445689999
Q ss_pred HHHHHHHHHHhhcCCCCCC-CCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCChhHhhhHHHHHHh
Q 008643 335 IIPALEAIWQNSSGKGLAD-FNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKFLEVAYPYVAKRL 413 (558)
Q Consensus 335 l~~~l~~l~~~~~~~~~~~-~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~~~~~a~p~v~~~l 413 (558)
+|+++|..+-+ .+++.. .+-.+++++ +.++..-.+++|+ .--+..+|+.||.|+|
T Consensus 670 vGVIFyQClYG--rKPFGhnqsQQdILqe-NTIlkAtEVqFP~---------------------KPvVsseAkaFIRRCL 725 (775)
T KOG1151|consen 670 VGVIFYQCLYG--RKPFGHNQSQQDILQE-NTILKATEVQFPP---------------------KPVVSSEAKAFIRRCL 725 (775)
T ss_pred eehhhhhhhcc--CCCCCCchhHHHHHhh-hchhcceeccCCC---------------------CCccCHHHHHHHHHHH
Confidence 99998887642 223322 122233222 3334344444443 2234467777777777
Q ss_pred hc
Q 008643 414 LT 415 (558)
Q Consensus 414 l~ 415 (558)
..
T Consensus 726 aY 727 (775)
T KOG1151|consen 726 AY 727 (775)
T ss_pred Hh
Confidence 64
No 394
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.74 E-value=6.6e-19 Score=193.20 Aligned_cols=188 Identities=19% Similarity=0.210 Sum_probs=137.8
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChh--hHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhc
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEP--IIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELD 185 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~--~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld 185 (558)
+.||.|.+|+||+++.+++|+.+|||++.|.... .++.+..+++...
T Consensus 25 evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~------------------------------- 73 (953)
T KOG0587|consen 25 EVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYS------------------------------- 73 (953)
T ss_pred EEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhcc-------------------------------
Confidence 6899999999999999999999999999987543 3333333333221
Q ss_pred HHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC-CC--CHHHHHHHHHHHHHHHHHHC
Q 008643 186 YTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA-GI--DVGGFLTVGVSAALRQLLEF 262 (558)
Q Consensus 186 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~-~~--~~~~~~~~~v~~~L~~Lh~~ 262 (558)
-|+|...|+..|..... .-....|||||||.||+.+|+..--.. .+ +....+.+.++.|+.+||.+
T Consensus 74 ---~hpnv~~fyg~~~k~~~--------~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n 142 (953)
T KOG0587|consen 74 ---HHPNVATFYGAFIKKDP--------GNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN 142 (953)
T ss_pred ---CCCCcceEEEEEEEecC--------CCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc
Confidence 15555555554432111 124567999999999999997653331 12 23345677899999999999
Q ss_pred CceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCC-----CCCCCCcccHHH
Q 008643 263 GLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGF-----LAKGTDVSPIIP 337 (558)
Q Consensus 263 Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~-----~~~~~Di~~l~~ 337 (558)
.++|||+|-.|||++.+|.||++|||.+.+++...... .+.-|++-+|||+++.... ++...|+|++|.
T Consensus 143 kviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~grR------nT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGI 216 (953)
T KOG0587|consen 143 KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVGRR------NTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGI 216 (953)
T ss_pred ceeeecccCceEEEeccCcEEEeeeeeeeeeecccccc------cCcCCCcccccceeeecccCCCCCcccccchhhccc
Confidence 99999999999999999999999999999998653332 2234899999999987543 344578999986
Q ss_pred HHHHHH
Q 008643 338 ALEAIW 343 (558)
Q Consensus 338 ~l~~l~ 343 (558)
+--++-
T Consensus 217 TaIEla 222 (953)
T KOG0587|consen 217 TAIEMA 222 (953)
T ss_pred eeehhc
Confidence 655543
No 395
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.74 E-value=3.7e-17 Score=154.92 Aligned_cols=183 Identities=21% Similarity=0.244 Sum_probs=129.0
Q ss_pred eeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHHHH
Q 008643 110 IAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYTLE 189 (558)
Q Consensus 110 Ig~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~~E 189 (558)
||+|++|+||+++...+|++++||+.++..... ....+ .+|
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~---------------------------------~~~~~------~~e 41 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS---------------------------------LLEEL------LRE 41 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh---------------------------------HHHHH------HHH
Confidence 689999999999996669999999988764321 00011 112
Q ss_pred HHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCH--HHHHHHHHHHHHHHHHHCCceec
Q 008643 190 ARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDV--GGFLTVGVSAALRQLLEFGLFHG 267 (558)
Q Consensus 190 a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~--~~~~~~~v~~~L~~Lh~~Gi~H~ 267 (558)
...+ ..+.+ +.+.-+.-+....+..+++|||++|++|.+.........+. ...+..++..++.+||..|++|+
T Consensus 42 ~~~~----~~l~~-~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~ 116 (215)
T cd00180 42 IEIL----KKLNH-PNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHR 116 (215)
T ss_pred HHHH----HhcCC-CCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence 2222 22222 23322222333346789999999999888764433123333 34467789999999999999999
Q ss_pred CCCCCCEEEec-CCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcccHHHHHHHH
Q 008643 268 DPHPGNIFAMR-DGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLG-FLAKGTDVSPIIPALEAI 342 (558)
Q Consensus 268 DlhPgNIlv~~-dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g-~~~~~~Di~~l~~~l~~l 342 (558)
|++|+||+++. +++++++|||.+......... .....+...+++|+....+ ..+...|+|++|..++++
T Consensus 117 dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~------~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l 187 (215)
T cd00180 117 DLKPENILLDSDNGKVKLADFGLSKLLTSDKSL------LKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL 187 (215)
T ss_pred CCCHhhEEEeCCCCcEEEecCCceEEccCCcch------hhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH
Confidence 99999999999 899999999999877665320 1122356777888888776 777889999999888887
No 396
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.74 E-value=4.7e-18 Score=174.65 Aligned_cols=191 Identities=20% Similarity=0.249 Sum_probs=145.0
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|-||.|++|++ -|+.||||+....-+....+|-+|...+.
T Consensus 216 ~e~IGkGRyGEVwrG~w--rGe~VAVKiF~srdE~SWfrEtEIYqTvm-------------------------------- 261 (513)
T KOG2052|consen 216 QEIIGKGRFGEVWRGRW--RGEDVAVKIFSSRDERSWFRETEIYQTVM-------------------------------- 261 (513)
T ss_pred EEEecCccccceeeccc--cCCceEEEEecccchhhhhhHHHHHHHHH--------------------------------
Confidence 37899999999999999 49999999998777777777776666542
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHH--HHHHHHHHHHHHHH---
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGF--LTVGVSAALRQLLE--- 261 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~--~~~~v~~~L~~Lh~--- 261 (558)
..|.|+..|.+.=..++.- .|..+||++|-+.|+|.|+.. ...++.... +..-+++||.+||.
T Consensus 262 -LRHENILgFIaaD~~~~gs---------~TQLwLvTdYHe~GSL~DyL~--r~tv~~~~ml~LalS~AsGLaHLH~eI~ 329 (513)
T KOG2052|consen 262 -LRHENILGFIAADNKDNGS---------WTQLWLVTDYHEHGSLYDYLN--RNTVTTEGMLKLALSIASGLAHLHMEIV 329 (513)
T ss_pred -hccchhhhhhhccccCCCc---------eEEEEEeeecccCCcHHHHHh--hccCCHHHHHHHHHHHhhhHHHHHHHHh
Confidence 2388998887653333222 578899999999999999743 345555544 44567899999994
Q ss_pred -----CCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCC------CCC
Q 008643 262 -----FGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLA------KGT 330 (558)
Q Consensus 262 -----~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~------~~~ 330 (558)
-+|-|||+|..||||..+|..+|.|+|++-..+..+.. ++.-...-.|+-.|||||+++--.-. ..+
T Consensus 330 GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~--idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~A 407 (513)
T KOG2052|consen 330 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDT--IDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRA 407 (513)
T ss_pred cCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCCc--ccCCCCCccceeeccChHHhhhhcChhhhhhhhHH
Confidence 26999999999999999999999999999877665421 11111122478899999998754322 247
Q ss_pred CcccHHHHHHHHHHh
Q 008643 331 DVSPIIPALEAIWQN 345 (558)
Q Consensus 331 Di~~l~~~l~~l~~~ 345 (558)
|+|+||-.++++..+
T Consensus 408 DIYafgLVlWEiarR 422 (513)
T KOG2052|consen 408 DIYAFGLVLWEIARR 422 (513)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999865
No 397
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.73 E-value=2.8e-18 Score=177.43 Aligned_cols=191 Identities=18% Similarity=0.112 Sum_probs=139.9
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||+|.||.||+|.+ +++.||||+....-.+....+-.|.+ .. .
T Consensus 216 eli~~Grfg~V~KaqL--~~~~VAVKifp~~~kqs~~~Ek~Iy~-------------------------------lp--~ 260 (534)
T KOG3653|consen 216 ELIGRGRFGCVWKAQL--DNRLVAVKIFPEQEKQSFQNEKNIYS-------------------------------LP--G 260 (534)
T ss_pred HHhhcCccceeehhhc--cCceeEEEecCHHHHHHHHhHHHHHh-------------------------------cc--C
Confidence 5799999999999999 57999999987654333333222211 11 3
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHC-----
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEF----- 262 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~----- 262 (558)
.+|+|+.+|...=+..... ....+||+||-+.|+|.++....-..+.....+..-+..||.|||+.
T Consensus 261 m~h~nIl~Fi~~ekr~t~~---------~~eywLVt~fh~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d 331 (534)
T KOG3653|consen 261 MKHENILQFIGAEKRGTAD---------RMEYWLVTEFHPKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGD 331 (534)
T ss_pred ccchhHHHhhchhccCCcc---------ccceeEEeeeccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCC
Confidence 4699999997654433211 22448999999999999975544333333444666789999999963
Q ss_pred ----CceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCC------CCCc
Q 008643 263 ----GLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAK------GTDV 332 (558)
Q Consensus 263 ----Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~------~~Di 332 (558)
+|.|||+|..|||+..|+..+|.|||++..+.+....+= .+.--|+-.||||+++....--. .+|+
T Consensus 332 ~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d----~~~qVGT~RYMAPEvLEgainl~d~~Afkr~Dv 407 (534)
T KOG3653|consen 332 HHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGD----THGQVGTRRYMAPEVLEGAINLQDRDAFKRIDV 407 (534)
T ss_pred CCCCccccccccccceEEccCCcEEeeccceeEEecCCCCCcc----hhhhhhhhhhcCHHHHhhhcccccHHHHHHHHH
Confidence 799999999999999999999999999999876433211 12234789999999998544322 3799
Q ss_pred ccHHHHHHHHHHhh
Q 008643 333 SPIIPALEAIWQNS 346 (558)
Q Consensus 333 ~~l~~~l~~l~~~~ 346 (558)
|++|-.++++.++.
T Consensus 408 YamgLVLWEi~SRC 421 (534)
T KOG3653|consen 408 YAMGLVLWEIASRC 421 (534)
T ss_pred HHHHHHHHHHHhhc
Confidence 99999999999873
No 398
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.73 E-value=3.2e-17 Score=170.42 Aligned_cols=185 Identities=15% Similarity=0.191 Sum_probs=127.1
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.++||.|++|.||+|..+.+|+.||||+......... ..+.+..|+
T Consensus 15 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~--------------------------------~~~~~~~E~-- 60 (328)
T cd07856 15 LQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPV--------------------------------LAKRTYREL-- 60 (328)
T ss_pred EEeecccCCeEEEEEEECCCCCEEEEEEecccccccc--------------------------------hhHHHHHHH--
Confidence 4799999999999999988999999997653211100 000111111
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCC--HHHHHHHHHHHHHHHHHHCCc
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGID--VGGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~--~~~~~~~~v~~~L~~Lh~~Gi 264 (558)
. ....+.+.+.+.+...+.......+++|||+. +++.+.. .....+ ....+..+++.++.+||+.|+
T Consensus 61 ----~----~l~~l~hpniv~~~~~~~~~~~~~~lv~e~~~-~~L~~~~--~~~~~~~~~~~~~~~ql~~aL~~LH~~~i 129 (328)
T cd07856 61 ----K----LLKHLRHENIISLSDIFISPLEDIYFVTELLG-TDLHRLL--TSRPLEKQFIQYFLYQILRGLKYVHSAGV 129 (328)
T ss_pred ----H----HHHhcCCCCeeeEeeeEecCCCcEEEEeehhc-cCHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 1 12223344444444444443456789999985 4554432 222222 234567899999999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-CCCCCCCCcccHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL-GFLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-g~~~~~~Di~~l~~~l~~l~ 343 (558)
+|+|++|.||+++.+|.++++|||.+........ ...++..+++|+.... ...++.+|+|++|..+++++
T Consensus 130 iH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~---------~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~ 200 (328)
T cd07856 130 VHRDLKPSNILINENCDLKICDFGLARIQDPQMT---------GYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEML 200 (328)
T ss_pred ccCCCCHHHEeECCCCCEEeCccccccccCCCcC---------CCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999876543221 1124556788887644 35677899999999999999
Q ss_pred Hh
Q 008643 344 QN 345 (558)
Q Consensus 344 ~~ 345 (558)
++
T Consensus 201 tg 202 (328)
T cd07856 201 EG 202 (328)
T ss_pred hC
Confidence 75
No 399
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.73 E-value=5.8e-18 Score=200.27 Aligned_cols=179 Identities=15% Similarity=0.150 Sum_probs=127.8
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||+|+||.||+|+.+.+|..||||..+..... ...++.+++ .+
T Consensus 695 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~l~-------------------------------~l-- 740 (968)
T PLN00113 695 ENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI-PSSEIADMG-------------------------------KL-- 740 (968)
T ss_pred ccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc-cHHHHHHHh-------------------------------hC--
Confidence 46899999999999999889999999987532110 011111111 11
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHH---HCC
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLL---EFG 263 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh---~~G 263 (558)
.|+|+.++.+.+.+ ....++||||++|++|.++. +.........+..+++.|+.|+| ..+
T Consensus 741 --~HpnIv~~~~~~~~-------------~~~~~lv~Ey~~~g~L~~~l--~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ 803 (968)
T PLN00113 741 --QHPNIVKLIGLCRS-------------EKGAYLIHEYIEGKNLSEVL--RNLSWERRRKIAIGIAKALRFLHCRCSPA 803 (968)
T ss_pred --CCCCcceEEEEEEc-------------CCCCEEEEeCCCCCcHHHHH--hcCCHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 14444444333322 33458999999999998764 33344455567889999999999 669
Q ss_pred ceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 008643 264 LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 264 i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~ 343 (558)
++|+|+||.||+++.++..++. ||..+....... ..+++.|+|||....+.++..+|+|++|+.+++++
T Consensus 804 iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~~----------~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~ 872 (968)
T PLN00113 804 VVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDTK----------CFISSAYVAPETRETKDITEKSDIYGFGLILIELL 872 (968)
T ss_pred eecCCCCHHhEEECCCCceEEE-eccccccccCCC----------ccccccccCcccccCCCCCcccchhhHHHHHHHHH
Confidence 9999999999999988877664 666544322211 12567899999998888899999999999999999
Q ss_pred Hhhc
Q 008643 344 QNSS 347 (558)
Q Consensus 344 ~~~~ 347 (558)
++..
T Consensus 873 tg~~ 876 (968)
T PLN00113 873 TGKS 876 (968)
T ss_pred hCCC
Confidence 8543
No 400
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.73 E-value=1.1e-18 Score=191.94 Aligned_cols=235 Identities=16% Similarity=0.229 Sum_probs=157.5
Q ss_pred cceeeeeeccEEEEEEEc-----CCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhH
Q 008643 107 SQTIAAASLGQVYRATLR-----ETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLL 181 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~-----~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~ 181 (558)
.+.+|+|.||.||+|+.. .+-.-||||..+.....+...
T Consensus 491 ~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~------------------------------------ 534 (774)
T KOG1026|consen 491 KEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQ------------------------------------ 534 (774)
T ss_pred hhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHH------------------------------------
Confidence 367999999999999873 123479999887665443333
Q ss_pred hhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC-------C------CCHHH--
Q 008643 182 EELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA-------G------IDVGG-- 246 (558)
Q Consensus 182 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~-------~------~~~~~-- 246 (558)
||++|+. +...|.|.+.|++-.+..+ ....++|.||++.|+|.++...... + +...+
T Consensus 535 ---dF~REae----Lla~l~H~nIVrLlGVC~~-~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L 606 (774)
T KOG1026|consen 535 ---DFRREAE----LLAELQHPNIVRLLGVCRE-GDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFL 606 (774)
T ss_pred ---HHHHHHH----HHHhccCCCeEEEEEEEcc-CCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHH
Confidence 3333332 2333344444444444332 3455999999999999876544322 1 22333
Q ss_pred HHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhc---CHHHHHHHHHHc
Q 008643 247 FLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNE---DYAEMANDFTRL 323 (558)
Q Consensus 247 ~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~---d~~~~a~~~~~~ 323 (558)
.+..||+.|+.||-++.|+||||-..|.||.++-.|||.||||++.+-...-.. .... -..+|+||-+-.
T Consensus 607 ~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk-------~~~~t~lPIRWMppEsIly 679 (774)
T KOG1026|consen 607 HIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYK-------VRGNTLLPIRWMPPESILY 679 (774)
T ss_pred HHHHHHHHHHHHHHhCcccccchhhhhceeccceEEEecccccchhhhhhhhhc-------ccCCceeeeecCCHHHhhc
Confidence 367899999999999999999999999999999999999999999876543322 1111 246899999999
Q ss_pred CCCCCCCCcccHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCC
Q 008643 324 GFLAKGTDVSPIIPALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDF 399 (558)
Q Consensus 324 g~~~~~~Di~~l~~~l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~ 399 (558)
|-++.++|+|++|+.|+++|+. .-.|.-.++-.++++.+.+ ..-...|.....-+.+++.- |....|.-
T Consensus 680 ~kFTteSDVWs~GVvLWEIFsy-G~QPy~glSn~EVIe~i~~---g~lL~~Pe~CP~~vY~LM~~---CW~~~P~~ 748 (774)
T KOG1026|consen 680 GKFTTESDVWSFGVVLWEIFSY-GKQPYYGLSNQEVIECIRA---GQLLSCPENCPTEVYSLMLE---CWNENPKR 748 (774)
T ss_pred Ccccchhhhhhhhhhhhhhhcc-ccCcccccchHHHHHHHHc---CCcccCCCCCCHHHHHHHHH---HhhcCccc
Confidence 9999999999999999999984 2345555555555444321 12233333333333344333 77777744
No 401
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.72 E-value=2.6e-16 Score=152.75 Aligned_cols=144 Identities=24% Similarity=0.269 Sum_probs=105.5
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
++||+|++|.||+|+. +|..|+||+..+.....-..+.. .....+.
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~--------------------------------~~~~~~~ 47 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDER--------------------------------IRRERTR 47 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHH--------------------------------HHHHHHH
Confidence 5799999999999988 78899999877643221111100 0111234
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHCCceec
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGLFHG 267 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi~H~ 267 (558)
+|..++.++. ++.+.+|.++....+..+++|||++|.+|.+.... ... ....+..++..++.++|..|++|+
T Consensus 48 ~E~~~l~~l~-----~~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~~~~--~~~-~~~~i~~~i~~~l~~lH~~~i~H~ 119 (211)
T PRK14879 48 REARIMSRAR-----KAGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINS--NGM-EELELSREIGRLVGKLHSAGIIHG 119 (211)
T ss_pred HHHHHHHHHH-----HCCCCCCeEEEEeCCCCEEEEEEeCCcCHHHHHHh--ccH-HHHHHHHHHHHHHHHHHhCCcccC
Confidence 4555555543 34578888887667788999999999999775432 111 334567788999999999999999
Q ss_pred CCCCCCEEEecCCCeEEeecCcccccC
Q 008643 268 DPHPGNIFAMRDGRIAYVDFGNVAELS 294 (558)
Q Consensus 268 DlhPgNIlv~~dg~l~liDFGl~~~l~ 294 (558)
|+||+||+++ ++.++++|||.+....
T Consensus 120 Dl~p~Nil~~-~~~~~liDf~~a~~~~ 145 (211)
T PRK14879 120 DLTTSNMILS-GGKIYLIDFGLAEFSK 145 (211)
T ss_pred CCCcccEEEE-CCCEEEEECCcccCCC
Confidence 9999999998 8999999999988644
No 402
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.71 E-value=1.9e-17 Score=172.40 Aligned_cols=184 Identities=20% Similarity=0.225 Sum_probs=137.3
Q ss_pred eeeeeeccEEEEEEEcCCCcEEEEEEecCCC--hhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 109 TIAAASLGQVYRATLRETGEDVAIKVQRPGI--EPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 109 pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~--~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
-.|+|-|+.|.+|.+..-|..||||++|.+- .+.=..++.||+.+.. .|.+.
T Consensus 439 ~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~-----------AD~Ed--------------- 492 (752)
T KOG0670|consen 439 YTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLND-----------ADPED--------------- 492 (752)
T ss_pred ccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhc-----------cCchh---------------
Confidence 4689999999999998889999999999762 2334567777776641 12111
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCC------CCHHHHHHHHHHHHHHHHH
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAG------IDVGGFLTVGVSAALRQLL 260 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~------~~~~~~~~~~v~~~L~~Lh 260 (558)
-.++.++...|.+.+.+ |||.|-+. .+|.++ +++.| +...+.|..|+..+|+.|-
T Consensus 493 ---k~Hclrl~r~F~hknHL-------------ClVFE~Ls-lNLRev--LKKyG~nvGL~ikaVRsYaqQLflALklLK 553 (752)
T KOG0670|consen 493 ---KFHCLRLFRHFKHKNHL-------------CLVFEPLS-LNLREV--LKKYGRNVGLHIKAVRSYAQQLFLALKLLK 553 (752)
T ss_pred ---hhHHHHHHHHhhhccee-------------EEEehhhh-chHHHH--HHHhCcccceeehHHHHHHHHHHHHHHHHH
Confidence 35778898999887777 89988763 344443 34433 3445679999999999999
Q ss_pred HCCceecCCCCCCEEEecC-CCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHH
Q 008643 261 EFGLFHGDPHPGNIFAMRD-GRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPAL 339 (558)
Q Consensus 261 ~~Gi~H~DlhPgNIlv~~d-g~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l 339 (558)
..||+|+||||.|||+++. ..+||||||.+...++..-.. .++.- -|-||+++-.-.+..+.|+|+.||+|
T Consensus 554 ~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~eneitP---YLVSR-----FYRaPEIiLG~~yd~~iD~WSvgctL 625 (752)
T KOG0670|consen 554 KCGVLHADIKPDNILVNESKNILKLCDFGSASFASENEITP---YLVSR-----FYRAPEIILGLPYDYPIDTWSVGCTL 625 (752)
T ss_pred hcCeeecccCccceEeccCcceeeeccCccccccccccccH---HHHHH-----hccCcceeecCcccCCccceeeceee
Confidence 9999999999999999876 468999999999887654322 22221 13366766555577889999999999
Q ss_pred HHHHHh
Q 008643 340 EAIWQN 345 (558)
Q Consensus 340 ~~l~~~ 345 (558)
|+++++
T Consensus 626 YElYtG 631 (752)
T KOG0670|consen 626 YELYTG 631 (752)
T ss_pred EEeecc
Confidence 999986
No 403
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.71 E-value=2.4e-17 Score=174.30 Aligned_cols=233 Identities=14% Similarity=0.169 Sum_probs=172.3
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChh--hHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhh
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEP--IIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEEL 184 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~--~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~El 184 (558)
...+|-|-||.||.|.+++-.-.||||..+.+..+ .+..+. .+..||
T Consensus 272 khKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEA-------------------------------AvMKei 320 (1157)
T KOG4278|consen 272 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEA-------------------------------AVMKEI 320 (1157)
T ss_pred eeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHH-------------------------------HHHHhh
Confidence 56899999999999999988899999988765322 111222 233344
Q ss_pred cHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCC-CCHH--HHHHHHHHHHHHHHHH
Q 008643 185 DYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAG-IDVG--GFLTVGVSAALRQLLE 261 (558)
Q Consensus 185 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~-~~~~--~~~~~~v~~~L~~Lh~ 261 (558)
. |+|++++...+.+.+.+ ||++|||..|+|.|+....... ++.. .....||.+++.||..
T Consensus 321 k----HpNLVqLLGVCT~EpPF-------------YIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEk 383 (1157)
T KOG4278|consen 321 K----HPNLVQLLGVCTHEPPF-------------YIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEK 383 (1157)
T ss_pred c----CccHHHHhhhhccCCCe-------------EEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHH
Confidence 3 89999999999998877 9999999999998875432222 2221 2356789999999999
Q ss_pred CCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHH
Q 008643 262 FGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEA 341 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~ 341 (558)
.+|+|||+-..|.|+.++.-+|+.|||+++.+..++....+. ..-...+.||+-+...-++-++|+|+||+.|++
T Consensus 384 knFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAG-----AKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWE 458 (1157)
T KOG4278|consen 384 KNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAG-----AKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWE 458 (1157)
T ss_pred hhhhhhhhhhhhccccccceEEeeccchhhhhcCCceecccC-----ccCcccccCcccccccccccchhhHHHHHHHHH
Confidence 999999999999999999999999999999887765432111 112345667777777777888999999999999
Q ss_pred HHHhhcCCCCCCCCHHHHHHHHHHHH-HhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 342 IWQNSSGKGLADFNFRSVTGQFNKLV-YNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 342 l~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
+-+ |...++..++..++.+.+.+-. .+.|--+|+....++|+ |+.-.|.-+
T Consensus 459 IAT-YGMsPYPGidlSqVY~LLEkgyRM~~PeGCPpkVYeLMra-------CW~WsPsDR 510 (1157)
T KOG4278|consen 459 IAT-YGMSPYPGIDLSQVYGLLEKGYRMDGPEGCPPKVYELMRA-------CWNWSPSDR 510 (1157)
T ss_pred HHh-cCCCCCCCccHHHHHHHHhccccccCCCCCCHHHHHHHHH-------HhcCCcccC
Confidence 876 3444666777666555443321 13456689998888887 777777654
No 404
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.71 E-value=2.8e-18 Score=181.64 Aligned_cols=233 Identities=17% Similarity=0.213 Sum_probs=162.4
Q ss_pred cceeeeeeccEEEEEEEcC--CCc--EEEEEEecCCChh----hHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHH
Q 008643 107 SQTIAAASLGQVYRATLRE--TGE--DVAIKVQRPGIEP----IIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGE 178 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~--~G~--~VAVKv~rp~~~~----~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~ 178 (558)
.+.||.|-||.||+|++.. .|+ -||||.-+.+... .+-.+..+||.
T Consensus 394 ~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrn-------------------------- 447 (974)
T KOG4257|consen 394 KRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRN-------------------------- 447 (974)
T ss_pred HHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHh--------------------------
Confidence 3579999999999999842 233 5889987764332 22222222222
Q ss_pred hhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHH--HHHHHHHHHH
Q 008643 179 KLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGG--FLTVGVSAAL 256 (558)
Q Consensus 179 ~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~--~~~~~v~~~L 256 (558)
+| |+|+.++.+.+... ..|+|||.++-|.|..+...++..++... ++..|++.+|
T Consensus 448 -----fd----HphIikLIGv~~e~--------------P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~tal 504 (974)
T KOG4257|consen 448 -----FD----HPHIIKLIGVCVEQ--------------PMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTAL 504 (974)
T ss_pred -----CC----Ccchhheeeeeecc--------------ceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHH
Confidence 11 56666665544333 33899999999999888766666666554 5788999999
Q ss_pred HHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHH
Q 008643 257 RQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPII 336 (558)
Q Consensus 257 ~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~ 336 (558)
.|||+..|+|||+-..|||+.....+|+.|||+++.++++.-..-. ...-...+|+|+-+...-.+..+|+|-||
T Consensus 505 aYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS-----~~kLPIKWmaPESINfRrFTtASDVWMFg 579 (974)
T KOG4257|consen 505 AYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKAS-----RGKLPIKWMAPESINFRRFTTASDVWMFG 579 (974)
T ss_pred HHHHhhchhhhhhhhhheeecCcceeeecccchhhhccccchhhcc-----ccccceeecCccccchhcccchhhHHHHH
Confidence 9999999999999999999999999999999999999876533210 11224568999999988889999999999
Q ss_pred HHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 337 PALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 337 ~~l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
+.++++++. .-+++....-.++.. .+-......+|+.....+-++++. |+..+|.-+
T Consensus 580 VCmWEIl~l-GvkPfqgvkNsDVI~---~iEnGeRlP~P~nCPp~LYslmsk---cWayeP~kR 636 (974)
T KOG4257|consen 580 VCMWEILSL-GVKPFQGVKNSDVIG---HIENGERLPCPPNCPPALYSLMSK---CWAYEPSKR 636 (974)
T ss_pred HHHHHHHHh-cCCccccccccceEE---EecCCCCCCCCCCCChHHHHHHHH---HhccCcccC
Confidence 999999973 122222222223322 222234455666666666677776 999999654
No 405
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.71 E-value=7.7e-17 Score=175.76 Aligned_cols=124 Identities=20% Similarity=0.138 Sum_probs=87.7
Q ss_pred CceEEEEeeeCCCCCCCHHHHhcC-------------------------CCCHHHHHHHHHHHHHHHHHHCCceecCCCC
Q 008643 217 GSRVLVMEWIDGIRCTDPQAIKGA-------------------------GIDVGGFLTVGVSAALRQLLEFGLFHGDPHP 271 (558)
Q Consensus 217 ~~~vLvmE~i~G~~L~d~~~~~~~-------------------------~~~~~~~~~~~v~~~L~~Lh~~Gi~H~DlhP 271 (558)
+..+|||||+++++|.++...... ..+....+..+++.++.|+|..|++|+|+||
T Consensus 258 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp 337 (507)
T PLN03224 258 GSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKP 337 (507)
T ss_pred CceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCch
Confidence 456999999999988765432100 0112234677899999999999999999999
Q ss_pred CCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCC----------------------CCC
Q 008643 272 GNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFL----------------------AKG 329 (558)
Q Consensus 272 gNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~----------------------~~~ 329 (558)
+||+++.++.++++|||++..+....... ......++.|++||.+..... .+.
T Consensus 338 ~NILl~~~~~~kL~DFGla~~~~~~~~~~-----~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~ 412 (507)
T PLN03224 338 ENLLVTVDGQVKIIDFGAAVDMCTGINFN-----PLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDL 412 (507)
T ss_pred HhEEECCCCcEEEEeCcCccccccCCccC-----ccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCc
Confidence 99999999999999999987654321100 001123567788777643221 124
Q ss_pred CCcccHHHHHHHHHHh
Q 008643 330 TDVSPIIPALEAIWQN 345 (558)
Q Consensus 330 ~Di~~l~~~l~~l~~~ 345 (558)
.|+|++|+.+++++..
T Consensus 413 ~DvwSlGvil~em~~~ 428 (507)
T PLN03224 413 FDSYTAGVLLMQMCVP 428 (507)
T ss_pred cchhhHHHHHHHHHhC
Confidence 6999999999999874
No 406
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.70 E-value=2.8e-17 Score=157.97 Aligned_cols=194 Identities=18% Similarity=0.167 Sum_probs=131.7
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.+|.|+|+-||.+..-.+++.+|+|.+.-.-.+.+ +...+|+|+
T Consensus 26 ~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~----------------------------------e~~~rEid~ 71 (302)
T KOG2345|consen 26 QRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDI----------------------------------EEALREIDN 71 (302)
T ss_pred eeeecCCCceeeeeecccCcccchhhheeeccchHHH----------------------------------HHHHHHHHH
Confidence 3679999999999999888999999996532211111 112233333
Q ss_pred H--HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC-C--CCHHH--HHHHHHHHHHHHH
Q 008643 187 T--LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA-G--IDVGG--FLTVGVSAALRQL 259 (558)
Q Consensus 187 ~--~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~-~--~~~~~--~~~~~v~~~L~~L 259 (558)
. .+++|+.+.....-.. ..+.+...||+..|..-|++.+.....+. | .+..+ .++.+++.||++|
T Consensus 72 ~rkf~s~~vl~l~dh~l~~--------~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~l 143 (302)
T KOG2345|consen 72 HRKFNSPNVLRLVDHQLRE--------EKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEAL 143 (302)
T ss_pred HHhhCCcchHHHHHHHHHh--------hccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHH
Confidence 2 1345555544332111 01125567999999988888775543322 2 44444 4778999999999
Q ss_pred HHCC--ceecCCCCCCEEEecCCCeEEeecCcccccChh---hHH--HHHHHHHHHHhcCHHHHHHHHHHc---CCCCCC
Q 008643 260 LEFG--LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQ---NKQ--ILIDAVVHAVNEDYAEMANDFTRL---GFLAKG 329 (558)
Q Consensus 260 h~~G--i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~---~~~--~l~~~~~~~~~~d~~~~a~~~~~~---g~~~~~ 329 (558)
|+.+ +.|+|+||+||++..+|.+++.|||.+....-. .++ .+-+- +.-+-+..|-||+++.. ..++.+
T Consensus 144 H~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~--a~e~Ct~pyRAPELf~vk~~~ti~er 221 (302)
T KOG2345|consen 144 HEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEW--AEERCTIPYRAPELFNVKSHCTITER 221 (302)
T ss_pred hccCCcccccCCCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHH--HHHhCCCcccCchheecccCcccccc
Confidence 9999 999999999999999999999999999876421 111 11111 11234566778888874 456788
Q ss_pred CCcccHHHHHHHHHH
Q 008643 330 TDVSPIIPALEAIWQ 344 (558)
Q Consensus 330 ~Di~~l~~~l~~l~~ 344 (558)
+|+|++|+++|.++-
T Consensus 222 tDIWSLGCtLYa~mf 236 (302)
T KOG2345|consen 222 TDIWSLGCTLYAMMF 236 (302)
T ss_pred cchhhhhHHHHHHHH
Confidence 999999999999985
No 407
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.69 E-value=5.2e-18 Score=167.33 Aligned_cols=196 Identities=21% Similarity=0.246 Sum_probs=133.5
Q ss_pred hHhhhcccCcceeeeeeccEEEEEEEcCCCc----EEEEEEecC-----CChhhHHHHHHHHHHHHHHhhhhhhhccCCC
Q 008643 98 LEAVFSKISSQTIAAASLGQVYRATLRETGE----DVAIKVQRP-----GIEPIIYRDLFLFRTLASFLNGISIQKLGCN 168 (558)
Q Consensus 98 ~~~~f~~~~~~pIg~Gs~GqVy~a~~~~~G~----~VAVKv~rp-----~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~ 168 (558)
++.+|.+-.-..||+|.||.||+|.-+.++- ++|+|..+- |+.....+++.++|.+.
T Consensus 20 ve~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~-------------- 85 (438)
T KOG0666|consen 20 VEDLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELK-------------- 85 (438)
T ss_pred HHHHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhc--------------
Confidence 3445433335679999999999997654432 688886543 44555555555544432
Q ss_pred hHHHHHHHHHhhHhhhcHHHHHHHHHHHHHhcCC-CCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC----CCC
Q 008643 169 AELIVDEFGEKLLEELDYTLEARNMEDFLENFKD-DPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA----GID 243 (558)
Q Consensus 169 ~~~iv~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~-~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~----~~~ 243 (558)
|+|+..+.+.|-. +..| +|+.||.+. +|..++...+. .++
T Consensus 86 ---------------------h~nvi~Lv~Vfl~~d~~v-------------~l~fdYAEh-DL~~II~fHr~~~~~~lp 130 (438)
T KOG0666|consen 86 ---------------------HPNVISLVKVFLSHDKKV-------------WLLFDYAEH-DLWHIIKFHRASKAKQLP 130 (438)
T ss_pred ---------------------CCcchhHHHHHhccCceE-------------EEEehhhhh-hHHHHHHHhccchhccCC
Confidence 7888888877765 3444 899999985 44334333222 233
Q ss_pred H--HHHHHHHHHHHHHHHHHCCceecCCCCCCEEEecC----CCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHH
Q 008643 244 V--GGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRD----GRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMA 317 (558)
Q Consensus 244 ~--~~~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~d----g~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a 317 (558)
+ .+-+..|++.|+.|||++=++|||+||.||+++.| |++||.|||+++.+...-+..... .-+--+.-|-|
T Consensus 131 ~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~---d~VVVTiWYRA 207 (438)
T KOG0666|consen 131 RSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASL---DPVVVTIWYRA 207 (438)
T ss_pred HHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccC---CceEEEEEecC
Confidence 2 24577899999999999999999999999999988 899999999998776543221000 00011233556
Q ss_pred HHHHH-cCCCCCCCCcccHHHHHHHHHHh
Q 008643 318 NDFTR-LGFLAKGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 318 ~~~~~-~g~~~~~~Di~~l~~~l~~l~~~ 345 (558)
|+++- ..-+++.+|+|++||++.++++.
T Consensus 208 PELLLGa~hYT~AiDvWAiGCIfaElLtl 236 (438)
T KOG0666|consen 208 PELLLGARHYTKAIDVWAIGCIFAELLTL 236 (438)
T ss_pred hHHhcccccccchhhhHHHHHHHHHHHcc
Confidence 66654 34578899999999999999864
No 408
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.68 E-value=2.5e-18 Score=165.16 Aligned_cols=191 Identities=18% Similarity=0.248 Sum_probs=128.8
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEe-----cCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHh
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQ-----RPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLE 182 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~-----rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~ 182 (558)
..||+|.||.||+|+.+.+|+.||+|.. +.|..... .+
T Consensus 23 ~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpita-------------------------------------lr 65 (376)
T KOG0669|consen 23 AKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITA-------------------------------------LR 65 (376)
T ss_pred HhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHH-------------------------------------HH
Confidence 5799999999999999999999999853 12222222 33
Q ss_pred hhcHHHH--HHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHH--hcCCCCHHHHHHHHHHHHHHH
Q 008643 183 ELDYTLE--ARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAI--KGAGIDVGGFLTVGVSAALRQ 258 (558)
Q Consensus 183 Eld~~~E--a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~--~~~~~~~~~~~~~~v~~~L~~ 258 (558)
|++...- |.|...+.+.++.... |. -.+.+..+||+.+|+. +|.-+... .+..+...+.+..++..||.|
T Consensus 66 eikiL~~lkHenv~nliEic~tk~T---p~--~r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~ 139 (376)
T KOG0669|consen 66 EIKILQLLKHENVVNLIEICRTKAT---PT--NRDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYY 139 (376)
T ss_pred HHHHHHHhcchhHHHHHHHHhhccC---Cc--ccccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHH
Confidence 4443332 6666666665544221 11 1134557999999985 22222111 122344456788999999999
Q ss_pred HHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHH---HHHHHHHHHHhcCHHHHHHHHHH-cCCCCCCCCccc
Q 008643 259 LLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQ---ILIDAVVHAVNEDYAEMANDFTR-LGFLAKGTDVSP 334 (558)
Q Consensus 259 Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~---~l~~~~~~~~~~d~~~~a~~~~~-~g~~~~~~Di~~ 334 (558)
+|+..|+|||+||.|+||+.+|.+|+.|||+++.++..... .+..-++ +.-|..++++- ...+++..|+|.
T Consensus 140 iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvv-----TLwYrppEllLG~r~yg~~iDiWg 214 (376)
T KOG0669|consen 140 IHRNKILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVV-----TLWYRPPELLLGDREYGPPIDIWG 214 (376)
T ss_pred HHHhhHHhhcccHhhEEEcCCceEEeeccccccceecccccCCCCccccee-----eeecCCHHHhhcccccCCcchhHh
Confidence 99999999999999999999999999999999877643221 1111111 33344444433 345778899999
Q ss_pred HHHHHHHHHHhh
Q 008643 335 IIPALEAIWQNS 346 (558)
Q Consensus 335 l~~~l~~l~~~~ 346 (558)
-|+.+.++|++.
T Consensus 215 AgCimaeMwtrs 226 (376)
T KOG0669|consen 215 AGCIMAEMWTRS 226 (376)
T ss_pred HHHHHHHHHccC
Confidence 999999999863
No 409
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.68 E-value=8.3e-16 Score=147.88 Aligned_cols=140 Identities=24% Similarity=0.270 Sum_probs=101.0
Q ss_pred eeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHHHH
Q 008643 110 IAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYTLE 189 (558)
Q Consensus 110 Ig~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~~E 189 (558)
||+|++|.||+|.. +|.+|+||+..+.....-..|.. .+.-.+.+|
T Consensus 2 ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~--------------------------------~~~~~~~~E 47 (199)
T TIGR03724 2 IAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDER--------------------------------IRRERTRNE 47 (199)
T ss_pred CCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHH--------------------------------HHHHHHHHH
Confidence 79999999999986 68999999865432110000000 000112334
Q ss_pred HHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHCCceecCC
Q 008643 190 ARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGLFHGDP 269 (558)
Q Consensus 190 a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi~H~Dl 269 (558)
..++.++.. +.+.+|.++.......+++|||++|+++.+.... .+ . .+..++..++.++|..|++|+|+
T Consensus 48 ~~~l~~l~~-----~~i~~p~~~~~~~~~~~lv~e~~~g~~l~~~~~~--~~---~-~~~~~i~~~l~~lH~~gi~H~Dl 116 (199)
T TIGR03724 48 ARLLSRARK-----AGVNTPVVYDVDPDNKTIVMEYIEGKPLKDVIEE--GN---D-ELLREIGRLVGKLHKAGIVHGDL 116 (199)
T ss_pred HHHHHHHHH-----CCCCCCEEEEEECCCCEEEEEEECCccHHHHHhh--cH---H-HHHHHHHHHHHHHHHCCeecCCC
Confidence 555555432 3577888887777778999999999998765321 11 1 56778999999999999999999
Q ss_pred CCCCEEEecCCCeEEeecCcccccCh
Q 008643 270 HPGNIFAMRDGRIAYVDFGNVAELSQ 295 (558)
Q Consensus 270 hPgNIlv~~dg~l~liDFGl~~~l~~ 295 (558)
||+||+++ +++++++|||++.....
T Consensus 117 ~~~Nil~~-~~~~~liDfg~a~~~~~ 141 (199)
T TIGR03724 117 TTSNIIVR-DDKLYLIDFGLGKYSDE 141 (199)
T ss_pred CcceEEEE-CCcEEEEECCCCcCCCc
Confidence 99999998 89999999999887544
No 410
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.67 E-value=4.5e-17 Score=184.95 Aligned_cols=147 Identities=22% Similarity=0.234 Sum_probs=101.7
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||.|+||.||+|++..+|+.||||+.+...... ......+..|+
T Consensus 9 ~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~-------------------------------~~~~~~~~~E~-- 55 (669)
T cd05610 9 VKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMIN-------------------------------KNMVHQVQAER-- 55 (669)
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccC-------------------------------HHHHHHHHHHH--
Confidence 478999999999999998899999999986431100 00001111121
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHCCce
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLEFGLF 265 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~~Gi~ 265 (558)
. ....+.+...+.+... .......++||||+.|++|.++..... ........+..+++.+|.|||..||+
T Consensus 56 ----~----~l~~l~hp~Iv~~~~~-~~~~~~~~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIi 126 (669)
T cd05610 56 ----D----ALALSKSPFIVHLYYS-LQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGII 126 (669)
T ss_pred ----H----HHHhcCCCCcCeEEEE-EEECCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 1 1122233332322222 233456799999999999987653221 12334456788999999999999999
Q ss_pred ecCCCCCCEEEecCCCeEEeecCcccccCh
Q 008643 266 HGDPHPGNIFAMRDGRIAYVDFGNVAELSQ 295 (558)
Q Consensus 266 H~DlhPgNIlv~~dg~l~liDFGl~~~l~~ 295 (558)
|+||||+|||++.+|.++|+|||++.....
T Consensus 127 HrDLKP~NILl~~~g~vkL~DFGls~~~~~ 156 (669)
T cd05610 127 HRDLKPDNMLISNEGHIKLTDFGLSKVTLN 156 (669)
T ss_pred eCCccHHHEEEcCCCCEEEEeCCCCccccC
Confidence 999999999999999999999999986543
No 411
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.66 E-value=3.3e-17 Score=179.18 Aligned_cols=257 Identities=18% Similarity=0.202 Sum_probs=165.1
Q ss_pred Ccceeeeeecc-EEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhh
Q 008643 106 SSQTIAAASLG-QVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEEL 184 (558)
Q Consensus 106 ~~~pIg~Gs~G-qVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~El 184 (558)
+++.+|.|+-| .||+|.. .|++||||..-+ |+.....+|+
T Consensus 513 ~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~-------------------------------------e~~~~A~rEi 553 (903)
T KOG1027|consen 513 PKEILGYGSNGTVVFRGVY--EGREVAVKRLLE-------------------------------------EFFDFAQREI 553 (903)
T ss_pred cHHHcccCCCCcEEEEEee--CCceehHHHHhh-------------------------------------HhHHHHHHHH
Confidence 36778899986 5899999 799999996433 3333344555
Q ss_pred cHHH---HHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHh-----cCC-CCHHHHHHHHHHHH
Q 008643 185 DYTL---EARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIK-----GAG-IDVGGFLTVGVSAA 255 (558)
Q Consensus 185 d~~~---Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~-----~~~-~~~~~~~~~~v~~~ 255 (558)
+..+ +|+|++|++..=++... .|+..|.|. .+|.|+.... ..+ +++ .....|+..|
T Consensus 554 ~lL~eSD~H~NviRyyc~E~d~qF-------------~YIalELC~-~sL~dlie~~~~d~~~~~~i~~-~~~l~q~~~G 618 (903)
T KOG1027|consen 554 QLLQESDEHPNVIRYYCSEQDRQF-------------LYIALELCA-CSLQDLIESSGLDVEMQSDIDP-ISVLSQIASG 618 (903)
T ss_pred HHHHhccCCCceEEEEeeccCCce-------------EEEEehHhh-hhHHHHHhccccchhhcccccH-HHHHHHHHHH
Confidence 5444 36666666544444333 489999996 4666654432 011 222 3456789999
Q ss_pred HHHHHHCCceecCCCCCCEEEec---CC--CeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCC
Q 008643 256 LRQLLEFGLFHGDPHPGNIFAMR---DG--RIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGT 330 (558)
Q Consensus 256 L~~Lh~~Gi~H~DlhPgNIlv~~---dg--~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~ 330 (558)
|.+||..+|+|||+||.||||.. +| +++|.|||+++.+..+... +.. .....|+..+.||+++.....+..+
T Consensus 619 laHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS-~~r--~s~~sGt~GW~APE~L~~~~~~~av 695 (903)
T KOG1027|consen 619 LAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSS-FSR--LSGGSGTSGWQAPEQLREDRKTQAV 695 (903)
T ss_pred HHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcch-hhc--ccCCCCcccccCHHHHhccccCccc
Confidence 99999999999999999999986 34 7899999999999875433 111 2345789999999999999988999
Q ss_pred CcccHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCChhHhhhHHHH
Q 008643 331 DVSPIIPALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKFLEVAYPYVA 410 (558)
Q Consensus 331 Di~~l~~~l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~~~~~a~p~v~ 410 (558)
|+.++||.++-++++ +.-+| ++...+=..++... . + ...|.|+-+- +|...|.
T Consensus 696 DiFslGCvfyYvltg----G~HpF--Gd~~~R~~NIl~~~-~-----------~-------L~~L~~~~d~--eA~dLI~ 748 (903)
T KOG1027|consen 696 DIFSLGCVFYYVLTG----GSHPF--GDSLERQANILTGN-Y-----------T-------LVHLEPLPDC--EAKDLIS 748 (903)
T ss_pred chhhcCceEEEEecC----CccCC--CchHHhhhhhhcCc-c-----------c-------eeeeccCchH--HHHHHHH
Confidence 999999998877753 22222 22222111111111 0 0 1112222221 4444444
Q ss_pred HHhhcCCCHHHHHHHHHHHhcccccchHHHHHHHHHHH
Q 008643 411 KRLLTDPNPALRERLIQVLFKDNVFQWKRLENLITLAK 448 (558)
Q Consensus 411 ~~ll~~~~p~~r~~l~~~l~~~~~~~~~rl~~l~~~a~ 448 (558)
+.+ ++.|..|....++|..--.+.|...-.+++.+.
T Consensus 749 ~ml--~~dP~~RPsa~~VL~HPlFW~~ekrL~Fl~dvS 784 (903)
T KOG1027|consen 749 RML--NPDPQLRPSATDVLNHPLFWDSEKRLSFLRDVS 784 (903)
T ss_pred Hhc--CCCcccCCCHHHHhCCCccCChHHHHHHHHhhh
Confidence 433 346777888888887766777765444444443
No 412
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.66 E-value=8.1e-17 Score=164.94 Aligned_cols=203 Identities=19% Similarity=0.174 Sum_probs=146.9
Q ss_pred cceeeeeeccEEEEEEEcC---CCcEEEEEEecC-CChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHh
Q 008643 107 SQTIAAASLGQVYRATLRE---TGEDVAIKVQRP-GIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLE 182 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~---~G~~VAVKv~rp-~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~ 182 (558)
.++||.|+|+.||+|++.. .++.||+|-+.+ .-...+..++..|..+.+
T Consensus 41 v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG--------------------------- 93 (418)
T KOG1167|consen 41 VNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGG--------------------------- 93 (418)
T ss_pred hccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhcc---------------------------
Confidence 3689999999999999976 678999997654 344567777777776642
Q ss_pred hhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHC
Q 008643 183 ELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEF 262 (558)
Q Consensus 183 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~ 262 (558)
+.|+..+..++.+...| ++||||.+.....++ ....+....+.|.+.+..+|.++|.+
T Consensus 94 -------~~ni~~~~~~~rnnd~v-------------~ivlp~~~H~~f~~l--~~~l~~~~i~~Yl~~ll~Al~~~h~~ 151 (418)
T KOG1167|consen 94 -------SDNIIKLNGCFRNNDQV-------------AIVLPYFEHDRFRDL--YRSLSLAEIRWYLRNLLKALAHLHKN 151 (418)
T ss_pred -------chhhhcchhhhccCCee-------------EEEecccCccCHHHH--HhcCCHHHHHHHHHHHHHHhhhhhcc
Confidence 56777888888887777 899999998766654 34455666778899999999999999
Q ss_pred CceecCCCCCCEEEec-CCCeEEeecCcccccChhhHHHHHHH------------------HHH----------------
Q 008643 263 GLFHGDPHPGNIFAMR-DGRIAYVDFGNVAELSQQNKQILIDA------------------VVH---------------- 307 (558)
Q Consensus 263 Gi~H~DlhPgNIlv~~-dg~l~liDFGl~~~l~~~~~~~l~~~------------------~~~---------------- 307 (558)
||+|||+||+|++.+. .++-.|+|||++...+...+..-... +.+
T Consensus 152 GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~ 231 (418)
T KOG1167|consen 152 GIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRP 231 (418)
T ss_pred CccccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCcc
Confidence 9999999999999985 48899999999985332221111111 000
Q ss_pred ----HHhcCHHHHHHH-HHHcCCCCCCCCcccHHHHHHHHHHhhcCCCCCCCCHHH
Q 008643 308 ----AVNEDYAEMAND-FTRLGFLAKGTDVSPIIPALEAIWQNSSGKGLADFNFRS 358 (558)
Q Consensus 308 ----~~~~d~~~~a~~-~~~~g~~~~~~Di~~l~~~l~~l~~~~~~~~~~~~~~~~ 358 (558)
-..|++.+-||+ +.+.+--++.+|+|+.|+.+..+++..++.--...++..
T Consensus 232 ~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~a 287 (418)
T KOG1167|consen 232 SERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADA 287 (418)
T ss_pred ceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccch
Confidence 023455544444 445666778899999999999998876544333334333
No 413
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.64 E-value=2.1e-16 Score=169.14 Aligned_cols=180 Identities=19% Similarity=0.252 Sum_probs=131.9
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
..||+|++|.||||+++.+|+..|||+.+-.... |+..+-+|. .+.+|-
T Consensus 21 qrvgsgTygdvyKaRd~~s~elaavkvVkLep~d--------------------------d~~~iqqei--~~~~dc--- 69 (829)
T KOG0576|consen 21 QRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGD--------------------------DFSGIQQEI--GMLRDC--- 69 (829)
T ss_pred eeecCCcccchhhhcccccCchhhheeeeccCCc--------------------------cccccccce--eeeecC---
Confidence 5799999999999999999999999998643221 111111111 111222
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC-CCCHHHHHHHHHHHHHHHHHHCCcee
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA-GIDVGGFLTVGVSAALRQLLEFGLFH 266 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~-~~~~~~~~~~~v~~~L~~Lh~~Gi~H 266 (558)
.|+|+..+.+.+-..... +++||||.|++|.|+...... .........+....+++|+|..|-+|
T Consensus 70 -~h~nivay~gsylr~dkl-------------wicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~h 135 (829)
T KOG0576|consen 70 -RHPNIVAYFGSYLRRDKL-------------WICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIH 135 (829)
T ss_pred -CCcChHHHHhhhhhhcCc-------------EEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCccc
Confidence 288888888776554444 999999999999986433211 23334556778899999999999999
Q ss_pred cCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc---CCCCCCCCcccHHHH
Q 008643 267 GDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL---GFLAKGTDVSPIIPA 338 (558)
Q Consensus 267 ~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~---g~~~~~~Di~~l~~~ 338 (558)
||+|-+||+++..|.+++.|||.+++++...-.. ..+-|++.+||+|+... |-+....|+|+.|..
T Consensus 136 RdiKGanilltd~gDvklaDfgvsaqitati~Kr------ksfiGtpywmapEvaaverkggynqlcdiwa~git 204 (829)
T KOG0576|consen 136 RDIKGANILLTDEGDVKLADFGVSAQITATIAKR------KSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGIT 204 (829)
T ss_pred ccccccceeecccCceeecccCchhhhhhhhhhh------hcccCCccccchhHHHHHhcccccccccccccccc
Confidence 9999999999999999999999999886532110 12348999999988764 556677899999843
No 414
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.63 E-value=8.2e-16 Score=149.48 Aligned_cols=184 Identities=16% Similarity=0.163 Sum_probs=124.8
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEec-CCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhc
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQR-PGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELD 185 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~r-p~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld 185 (558)
.+.+|.|.||.+-.|+++.+.+.+++|... |... ...++.||...++
T Consensus 29 ~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt----------------------------~~dF~rEfhY~~~---- 76 (378)
T KOG1345|consen 29 NKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTT----------------------------QADFVREFHYSFF---- 76 (378)
T ss_pred HHHhcccceeeEEeeeccCCceEEEeeccCcchhh----------------------------HHHHHHHhcccee----
Confidence 478999999999999999999999999653 3211 1122223322221
Q ss_pred HHHHHHHHHHHHH-hcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHCCc
Q 008643 186 YTLEARNMEDFLE-NFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 186 ~~~Ea~n~~~~~~-~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi 264 (558)
..-|+|+..-++ .|+.... .+++|||++-++|..-......|+...+.+..|+.+++.|||+.++
T Consensus 77 -Ls~H~hIi~tY~vaFqt~d~-------------YvF~qE~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsknl 142 (378)
T KOG1345|consen 77 -LSPHQHIIDTYEVAFQTSDA-------------YVFVQEFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSKNL 142 (378)
T ss_pred -eccchhhhHHHHHHhhcCce-------------EEEeeccCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhccch
Confidence 123677666554 3444332 3899999999998764322233445567899999999999999999
Q ss_pred eecCCCCCCEEEec--CCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc---C--CCCCCCCcccHHH
Q 008643 265 FHGDPHPGNIFAMR--DGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL---G--FLAKGTDVSPIIP 337 (558)
Q Consensus 265 ~H~DlhPgNIlv~~--dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~---g--~~~~~~Di~~l~~ 337 (558)
+|||+|.+||||-. .-++|++|||......... +-.+....|-+|+.... + .+.|.+|+|.||.
T Consensus 143 VHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV---------~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGI 213 (378)
T KOG1345|consen 143 VHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTV---------KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGI 213 (378)
T ss_pred hhcccccceEEEecCCccEEEeeecccccccCcee---------hhhhhhcccCCcHHHhhccccceEecccccchheee
Confidence 99999999999953 3589999999987665421 22222233333333221 2 2467899999999
Q ss_pred HHHHHHHh
Q 008643 338 ALEAIWQN 345 (558)
Q Consensus 338 ~l~~l~~~ 345 (558)
.++..+++
T Consensus 214 i~f~cltG 221 (378)
T KOG1345|consen 214 IFFYCLTG 221 (378)
T ss_pred eeeeeecC
Confidence 88887764
No 415
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.62 E-value=2.6e-15 Score=168.54 Aligned_cols=232 Identities=14% Similarity=0.171 Sum_probs=155.1
Q ss_pred eeeeeeccEEEEEEEc---CC----CcEEEEEEecCCChh----hHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHH
Q 008643 109 TIAAASLGQVYRATLR---ET----GEDVAIKVQRPGIEP----IIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFG 177 (558)
Q Consensus 109 pIg~Gs~GqVy~a~~~---~~----G~~VAVKv~rp~~~~----~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~ 177 (558)
++|+|.||+|++|..+ .. ...||||..+..... .+..++.+|+.++
T Consensus 303 ~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g----------------------- 359 (609)
T KOG0200|consen 303 YLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELG----------------------- 359 (609)
T ss_pred eeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhc-----------------------
Confidence 9999999999999863 11 457999998766543 3344444444432
Q ss_pred HhhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc---------------CCC
Q 008643 178 EKLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG---------------AGI 242 (558)
Q Consensus 178 ~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~---------------~~~ 242 (558)
.|+|+..+.+.... .+..++++||+..|+|.++....+ ..+
T Consensus 360 -----------~H~niv~llG~~t~-------------~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L 415 (609)
T KOG0200|consen 360 -----------KHPNIVNLLGACTQ-------------DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDAL 415 (609)
T ss_pred -----------CCcchhhheeeecc-------------CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCc
Confidence 16666666554433 344599999999999987755444 013
Q ss_pred CHHHH--HHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhc--CHHHHHH
Q 008643 243 DVGGF--LTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNE--DYAEMAN 318 (558)
Q Consensus 243 ~~~~~--~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~--d~~~~a~ 318 (558)
....+ +..||+.|++||.+..++|||+-..|||+..+..+|++|||+++........... + ..+ -..+|||
T Consensus 416 ~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~----~-~~~~LP~kWmAp 490 (609)
T KOG0200|consen 416 TTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTK----S-SAGTLPVKWMAP 490 (609)
T ss_pred CHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCCCEEEEccccceeccCCCCceEec----C-CCCccceeecCH
Confidence 33333 5689999999999999999999999999999999999999999965543221000 0 001 2348999
Q ss_pred HHHHcCCCCCCCCcccHHHHHHHHHHhhcCCCCCCCC-HHHHHHHHHHHHH-hcCCCCchhHHHHHHHHHHHHhhhhhcC
Q 008643 319 DFTRLGFLAKGTDVSPIIPALEAIWQNSSGKGLADFN-FRSVTGQFNKLVY-NYRIRIPERFSLVIRSLLTQEGICFTLK 396 (558)
Q Consensus 319 ~~~~~g~~~~~~Di~~l~~~l~~l~~~~~~~~~~~~~-~~~l~~~l~~~~~-~~~~~lP~~~~~~~rsl~~legi~~~Ld 396 (558)
+.+....++..+|+|++|..|+++++- .+.|+..+. ..++...+.+--+ +.|..+++++..+++. |...+
T Consensus 491 Esl~~~~ft~kSDVWSfGI~L~EifsL-G~~PYp~~~~~~~l~~~l~~G~r~~~P~~c~~eiY~iM~~-------CW~~~ 562 (609)
T KOG0200|consen 491 ESLFDRVFTSKSDVWSFGILLWEIFTL-GGTPYPGIPPTEELLEFLKEGNRMEQPEHCSDEIYDLMKS-------CWNAD 562 (609)
T ss_pred HHhccCcccccchhhHHHHHHHHHhhC-CCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHH-------HhCCC
Confidence 999988899999999999999999873 334444433 2233221111000 1233344555544444 77788
Q ss_pred CCCC
Q 008643 397 PDFK 400 (558)
Q Consensus 397 P~~~ 400 (558)
|+.+
T Consensus 563 p~~R 566 (609)
T KOG0200|consen 563 PEDR 566 (609)
T ss_pred cccC
Confidence 8766
No 416
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.62 E-value=1.3e-16 Score=158.32 Aligned_cols=190 Identities=19% Similarity=0.234 Sum_probs=129.3
Q ss_pred ccCcceeeeeeccEEEEEEEcCCCcEEEEE-EecCCC----hhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHH
Q 008643 104 KISSQTIAAASLGQVYRATLRETGEDVAIK-VQRPGI----EPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGE 178 (558)
Q Consensus 104 ~~~~~pIg~Gs~GqVy~a~~~~~G~~VAVK-v~rp~~----~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~ 178 (558)
+.+-.|++.|.- -|..|-+.-.+++||+| +++|-. .++..+++.++..+
T Consensus 19 y~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v------------------------- 72 (369)
T KOG0665|consen 19 YVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCV------------------------- 72 (369)
T ss_pred eeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhh-------------------------
Confidence 445578888876 67778777889999998 455511 12223333333222
Q ss_pred hhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHH
Q 008643 179 KLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQ 258 (558)
Q Consensus 179 ~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~ 258 (558)
+|+|+.++...|... -..+.-...|+|||++++ +|..... .+.+-.....+..|+++|+++
T Consensus 73 ----------~~~nii~l~n~ftP~-------~~l~~~~e~y~v~e~m~~-nl~~vi~-~elDH~tis~i~yq~~~~ik~ 133 (369)
T KOG0665|consen 73 ----------NHKNIISLLNVFTPQ-------KTLEEFQEVYLVMELMDA-NLCQVIL-MELDHETISYILYQMLCGIKH 133 (369)
T ss_pred ----------cccceeeeeeccCcc-------ccHHHHHhHHHHHHhhhh-HHHHHHH-HhcchHHHHHHHHHHHHHHHH
Confidence 366666665554322 222223445899999985 5555443 223334456788999999999
Q ss_pred HHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHH
Q 008643 259 LLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPA 338 (558)
Q Consensus 259 Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~ 338 (558)
+|+.||+|||+||+||++..++.+|++|||++..-....+. ... +...|...++.++.+| +.+.+|+|+.|++
T Consensus 134 lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~~m--tpy----VvtRyyrapevil~~~-~ke~vdiwSvGci 206 (369)
T KOG0665|consen 134 LHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDFMM--TPY----VVTRYYRAPEVILGMG-YKENVDIWSVGCI 206 (369)
T ss_pred HHhcceeecccCcccceecchhheeeccchhhcccCccccc--Cch----hheeeccCchheeccC-CcccchhhhhhhH
Confidence 99999999999999999999999999999999876654222 111 1223444445556677 7889999999999
Q ss_pred HHHHHHh
Q 008643 339 LEAIWQN 345 (558)
Q Consensus 339 l~~l~~~ 345 (558)
+.++..+
T Consensus 207 ~gEli~~ 213 (369)
T KOG0665|consen 207 MGELILG 213 (369)
T ss_pred HHHHhhc
Confidence 9999865
No 417
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.59 E-value=3.9e-15 Score=142.63 Aligned_cols=138 Identities=20% Similarity=0.297 Sum_probs=102.9
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChh-hHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEP-IIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~-~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
++||+||||.+|.|....+|++||||+-+..+.. ++.
T Consensus 21 rkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~------------------------------------------ 58 (341)
T KOG1163|consen 21 RKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLL------------------------------------------ 58 (341)
T ss_pred EeecCCchhheeeeeeccCCceEEEEeecccCCCcchh------------------------------------------
Confidence 7899999999999999999999999997655321 111
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecC--CCceEEEEeeeCCCCCCCHHHHhcCC--CCHHHHHHHHHHHHHHHHHHC
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRL--SGSRVLVMEWIDGIRCTDPQAIKGAG--IDVGGFLTVGVSAALRQLLEF 262 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~vLvmE~i~G~~L~d~~~~~~~~--~~~~~~~~~~v~~~L~~Lh~~ 262 (558)
.|+ +.+..++. .+-+|.+.+-. ....+|||+.+ |.+|.++-...+.. ......+.-|++.-++|+|.+
T Consensus 59 -yEs----kvY~iL~~--g~GiP~i~~y~~e~~ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r 130 (341)
T KOG1163|consen 59 -YES----KVYRILQG--GVGIPHIRHYGTEKDYNVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLR 130 (341)
T ss_pred -HHH----HHHHHhcc--CCCCchhhhhccccccceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhh
Confidence 111 34444444 34557666544 44568999988 78888775554433 333445677899999999999
Q ss_pred CceecCCCCCCEEEecC---CCeEEeecCcccccCh
Q 008643 263 GLFHGDPHPGNIFAMRD---GRIAYVDFGNVAELSQ 295 (558)
Q Consensus 263 Gi~H~DlhPgNIlv~~d---g~l~liDFGl~~~l~~ 295 (558)
+|+|||+||+|+|..-+ .++.++|||+++.+-+
T Consensus 131 ~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d 166 (341)
T KOG1163|consen 131 NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRD 166 (341)
T ss_pred ccccccCCccceeeccccccceEEEEeccchhhhcc
Confidence 99999999999999643 6899999999997754
No 418
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.58 E-value=1.9e-14 Score=138.66 Aligned_cols=139 Identities=16% Similarity=0.175 Sum_probs=93.7
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
...+++|+||+||.+.. .+++|+.+...-. -..++.+++ .. +
T Consensus 7 ~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~--------~~~~~~~~~----------------------~l------~ 48 (218)
T PRK12274 7 NEPLKSDTFGRILLVRG--GERKFVRRDLSAA--------PWWLRGVAW----------------------WL------A 48 (218)
T ss_pred ceeecCCCcceEEEeec--CCceeeecccccc--------hhhhhhHHH----------------------HH------H
Confidence 46899999999997765 6777765543211 000111110 01 2
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHCCcee
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGLFH 266 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi~H 266 (558)
.+|...+.++ .+. ..+|.++.- +..+++|||++|.+|.+... . . ...+..++..++.++|+.|++|
T Consensus 49 ~rE~~iL~~L----~~~--~~vP~ll~~--~~~~lvmeyI~G~~L~~~~~---~--~-~~~~~~qi~~~L~~lH~~GIvH 114 (218)
T PRK12274 49 RREALALRQL----DGL--PRTPRLLHW--DGRHLDRSYLAGAAMYQRPP---R--G-DLAYFRAARRLLQQLHRCGVAH 114 (218)
T ss_pred HHHHHHHHhc----CCC--CCCCEEEEE--cCEEEEEeeecCccHHhhhh---h--h-hHHHHHHHHHHHHHHHHCcCcc
Confidence 3344444443 232 345777652 55799999999998854211 1 1 1235678889999999999999
Q ss_pred cCC-CCCCEEEecCCCeEEeecCcccccChhh
Q 008643 267 GDP-HPGNIFAMRDGRIAYVDFGNVAELSQQN 297 (558)
Q Consensus 267 ~Dl-hPgNIlv~~dg~l~liDFGl~~~l~~~~ 297 (558)
+|+ ||+||+++.+|+++|+|||++....+..
T Consensus 115 rDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~ 146 (218)
T PRK12274 115 NDLAKEANWLVQEDGSPAVIDFQLAVRGNPRA 146 (218)
T ss_pred CCCCCcceEEEcCCCCEEEEECCCceecCCcc
Confidence 999 7999999999999999999998766544
No 419
>PRK10345 hypothetical protein; Provisional
Probab=99.57 E-value=7.4e-15 Score=142.99 Aligned_cols=142 Identities=15% Similarity=0.132 Sum_probs=86.7
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCC---ChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhh
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPG---IEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEE 183 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~---~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~E 183 (558)
.++||+|++|.||. ++.++.. +||+.+++ ..+.+.+|+.+++.+.+. .
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~--------------------------~ 57 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRR--------------------------L 57 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhcc--------------------------C
Confidence 57999999999995 6566666 69998764 223333343333332100 0
Q ss_pred hcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCce-EEEEee--eCCCCCCCHHHHhcCCCCHHHHHHHHHHHHH-HHH
Q 008643 184 LDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSR-VLVMEW--IDGIRCTDPQAIKGAGIDVGGFLTVGVSAAL-RQL 259 (558)
Q Consensus 184 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~-vLvmE~--i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L-~~L 259 (558)
. .|+|+.++++.+.++.. .+.. .++||| +.+++|.++... ...+....+..+++.++ +||
T Consensus 58 ~----~h~nIvr~yg~~et~~g----------~g~v~~~I~e~~G~~~~tL~~~l~~--~~~~e~~~~~~~~L~~l~~yL 121 (210)
T PRK10345 58 I----DWSGIPRYYGTVETDCG----------TGYVYDVIADFDGKPSITLTEFAEQ--CRYEEDVAQLRQLLKKLKRYL 121 (210)
T ss_pred C----CCcccceeeEEEEeCCC----------CeEEEEEEecCCCCcchhHHHHHHc--ccccHhHHHHHHHHHHHHHHH
Confidence 0 13444444433332210 0111 378999 556888876532 23333334455666565 999
Q ss_pred HHCCceecCCCCCCEEEecC----CCeEEeecCccccc
Q 008643 260 LEFGLFHGDPHPGNIFAMRD----GRIAYVDFGNVAEL 293 (558)
Q Consensus 260 h~~Gi~H~DlhPgNIlv~~d----g~l~liDFGl~~~l 293 (558)
|++||+|||+||+||+++.. ++++|+|||-...+
T Consensus 122 h~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~~~ 159 (210)
T PRK10345 122 LDNRIVTMELKPQNILCQRISESEVIPVVCDNIGESTF 159 (210)
T ss_pred HHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCcce
Confidence 99999999999999999743 38999995444444
No 420
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.55 E-value=4.5e-14 Score=156.61 Aligned_cols=143 Identities=24% Similarity=0.294 Sum_probs=101.1
Q ss_pred CcceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhc
Q 008643 106 SSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELD 185 (558)
Q Consensus 106 ~~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld 185 (558)
..+.||+|++|.||+|.+ .+..+++|+..+.....-..+ ..+ ..-.
T Consensus 337 ~~~~iG~G~~g~Vy~~~~--~~~~~v~k~~~~~~~~~~~~~-------------------------------~~~-~~~~ 382 (535)
T PRK09605 337 PDHLIGKGAEADIKKGEY--LGRDAVIKERVPKGYRHPELD-------------------------------ERL-RTER 382 (535)
T ss_pred ccceeccCCcEEEEEEee--cCccceeEEEecccccchhHH-------------------------------HHH-HHHH
Confidence 357899999999999988 455667775433211100000 000 0112
Q ss_pred HHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHCCce
Q 008643 186 YTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGLF 265 (558)
Q Consensus 186 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi~ 265 (558)
+.+|...+.++. ++.+.+|.++.......+++|||++|++|.+... ....+..++..++.++|+.|++
T Consensus 383 ~~~E~~~l~~l~-----~~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~-------~~~~~~~~i~~~L~~lH~~gii 450 (535)
T PRK09605 383 TRAEARLLSEAR-----RAGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLE-------GNPELVRKVGEIVAKLHKAGIV 450 (535)
T ss_pred HHHHHHHHHhhc-----ccCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHH-------HHHHHHHHHHHHHHHHHhCCCc
Confidence 344555555542 3456677777766677899999999999876532 2345677899999999999999
Q ss_pred ecCCCCCCEEEecCCCeEEeecCcccccCh
Q 008643 266 HGDPHPGNIFAMRDGRIAYVDFGNVAELSQ 295 (558)
Q Consensus 266 H~DlhPgNIlv~~dg~l~liDFGl~~~l~~ 295 (558)
|+|+||+||++ .+++++++|||+++..+.
T Consensus 451 HrDlkp~NILl-~~~~~~liDFGla~~~~~ 479 (535)
T PRK09605 451 HGDLTTSNFIV-RDDRLYLIDFGLGKYSDL 479 (535)
T ss_pred cCCCChHHEEE-ECCcEEEEeCcccccCCc
Confidence 99999999999 688999999999987654
No 421
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.55 E-value=5.6e-15 Score=147.29 Aligned_cols=188 Identities=20% Similarity=0.266 Sum_probs=123.8
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||.||||..+.|+.--++++||||.-... .+.+.+-+|+
T Consensus 33 GkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk----------------------------S~APQLrdEY---------- 74 (449)
T KOG1165|consen 33 GKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK----------------------------SEAPQLRDEY---------- 74 (449)
T ss_pred ccccccCcceeeecccccccCceEEEEecccc----------------------------CCcchHHHHH----------
Confidence 46899999999999999889999999974221 1222223333
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeee--cCCCceEEEEeeeCCCCCCCHHHHhcC--CCCHHHHHHHHHHHHHHHHHHC
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYK--RLSGSRVLVMEWIDGIRCTDPQAIKGA--GIDVGGFLTVGVSAALRQLLEF 262 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~vLvmE~i~G~~L~d~~~~~~~--~~~~~~~~~~~v~~~L~~Lh~~ 262 (558)
+++..+...+. ||.+|. ...-...||||.+ |-+|.|+-..... .+.....+..|++.-++++|++
T Consensus 75 --------r~YKlL~g~~G--IP~vYYFGqeG~~NiLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k 143 (449)
T KOG1165|consen 75 --------RTYKLLGGTEG--IPQVYYFGQEGKYNILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEK 143 (449)
T ss_pred --------HHHHHHcCCCC--CCceeeeccccchhhhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhc
Confidence 56666665554 466654 4445568999988 7888887555443 3444456788999999999999
Q ss_pred CceecCCCCCCEEEecCC-----CeEEeecCcccccCh-hhHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcccH
Q 008643 263 GLFHGDPHPGNIFAMRDG-----RIAYVDFGNVAELSQ-QNKQILIDAVVHAVNEDYAEMANDFTRLG-FLAKGTDVSPI 335 (558)
Q Consensus 263 Gi~H~DlhPgNIlv~~dg-----~l~liDFGl~~~l~~-~~~~~l~~~~~~~~~~d~~~~a~~~~~~g-~~~~~~Di~~l 335 (558)
.++.||+||+|+||...| .|.++||||++.+-+ +++..+.---...+.|+..||.=.-. +| .-+..-|+.++
T Consensus 144 ~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTH-lGrEQSRRDDLEaL 222 (449)
T KOG1165|consen 144 DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTH-LGREQSRRDDLEAL 222 (449)
T ss_pred ceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCccccccccccceeeeEeecc-ccchhhhhhhHHHh
Confidence 999999999999997543 589999999998754 33221110000123456666541111 12 12334577777
Q ss_pred HHHHHHHHH
Q 008643 336 IPALEAIWQ 344 (558)
Q Consensus 336 ~~~l~~l~~ 344 (558)
|-.+.-++.
T Consensus 223 GHvFmYFLR 231 (449)
T KOG1165|consen 223 GHVFMYFLR 231 (449)
T ss_pred hhhhhhhcc
Confidence 766554444
No 422
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.52 E-value=7.1e-14 Score=145.21 Aligned_cols=192 Identities=14% Similarity=0.180 Sum_probs=128.7
Q ss_pred cceeeeeeccEEEEEEEcCCC-cEEEEEEecCCChh---hHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHh
Q 008643 107 SQTIAAASLGQVYRATLRETG-EDVAIKVQRPGIEP---IIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLE 182 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G-~~VAVKv~rp~~~~---~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~ 182 (558)
.+.||+|+||+||.+....++ ..+|+|+....... .+..+..++..+.
T Consensus 23 ~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~---------------------------- 74 (322)
T KOG1164|consen 23 GKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLE---------------------------- 74 (322)
T ss_pred eeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHh----------------------------
Confidence 578999999999999986553 68999987643211 3344443333321
Q ss_pred hhcHHHHHHHHHHHHHhcCCCCCeeeceeeecC---CCceEEEEeeeCCCCCCCHHHHhc-C--CCCHHHHHHHHHHHHH
Q 008643 183 ELDYTLEARNMEDFLENFKDDPTVKIPRVYKRL---SGSRVLVMEWIDGIRCTDPQAIKG-A--GIDVGGFLTVGVSAAL 256 (558)
Q Consensus 183 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~---~~~~vLvmE~i~G~~L~d~~~~~~-~--~~~~~~~~~~~v~~~L 256 (558)
. ....-.+|.+++.. ....++||+.+ |.+|.++..... . .......+..|++.+|
T Consensus 75 ---------------~---~~~~~~~~~~~~~G~~~~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l 135 (322)
T KOG1164|consen 75 ---------------K---KNGPSHFPKLLDHGRSTEDFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNAL 135 (322)
T ss_pred ---------------h---hcCCCCCCEEEEeccCCCceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHH
Confidence 1 12234567777655 23468999987 788887643322 1 2333445778899999
Q ss_pred HHHHHCCceecCCCCCCEEEecC-----CCeEEeecCccc--ccChhhHHHHH--HHHHHHHhcCHHHHHHHHHHcCCCC
Q 008643 257 RQLLEFGLFHGDPHPGNIFAMRD-----GRIAYVDFGNVA--ELSQQNKQILI--DAVVHAVNEDYAEMANDFTRLGFLA 327 (558)
Q Consensus 257 ~~Lh~~Gi~H~DlhPgNIlv~~d-----g~l~liDFGl~~--~l~~~~~~~l~--~~~~~~~~~d~~~~a~~~~~~g~~~ 327 (558)
+++|+.|++|||+||+|+.+... ..+.++|||+++ .+......... ...-+...|+..|...........+
T Consensus 136 ~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~ 215 (322)
T KOG1164|consen 136 EDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQG 215 (322)
T ss_pred HHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccC
Confidence 99999999999999999999865 359999999999 43221111000 0000233478888888887777788
Q ss_pred CCCCcccHHHHHHHHHHh
Q 008643 328 KGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 328 ~~~Di~~l~~~l~~l~~~ 345 (558)
+.-|+|++.-.+.++...
T Consensus 216 r~DDles~~Y~l~el~~g 233 (322)
T KOG1164|consen 216 RRDDLESLFYMLLELLKG 233 (322)
T ss_pred CchhhhhHHHHHHHHhcC
Confidence 888999977666666643
No 423
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.51 E-value=1e-14 Score=147.97 Aligned_cols=185 Identities=19% Similarity=0.221 Sum_probs=125.1
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecC--CChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhc
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRP--GIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELD 185 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp--~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld 185 (558)
..+|+|.||+|-.+.++.++..|||||+|. ...+....++.++.
T Consensus 95 ~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLq---------------------------------- 140 (415)
T KOG0671|consen 95 DLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQ---------------------------------- 140 (415)
T ss_pred hhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHH----------------------------------
Confidence 579999999999999999999999998763 11122222222222
Q ss_pred HHHHHHHHHHHHHhc-CCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Q 008643 186 YTLEARNMEDFLENF-KDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIK---GAGIDVGGFLTVGVSAALRQLLE 261 (558)
Q Consensus 186 ~~~Ea~n~~~~~~~~-~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~---~~~~~~~~~~~~~v~~~L~~Lh~ 261 (558)
++.+.- .....+..-.-+.+|.+..++|.|.+ |.++.|..... ...++..+.+..|++.++.+||+
T Consensus 141 ---------ki~~~DP~g~~rcv~m~~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~ 210 (415)
T KOG0671|consen 141 ---------KINESDPNGKFRCVQMRDWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHD 210 (415)
T ss_pred ---------HHHhcCCCCceEEEeeehhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHh
Confidence 222211 01122333334567788889999987 55665543221 12345556788999999999999
Q ss_pred CCceecCCCCCCEEEec--------------------CCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHH
Q 008643 262 FGLFHGDPHPGNIFAMR--------------------DGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFT 321 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~--------------------dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~ 321 (558)
.+++|-|+||+||++.. +-.|+++|||.+..-.+.. . .+-.+-.|-||+++
T Consensus 211 ~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h-s--------~iVsTRHYRAPEVi 281 (415)
T KOG0671|consen 211 LKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH-S--------TIVSTRHYRAPEVI 281 (415)
T ss_pred cceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCc-c--------eeeeccccCCchhe
Confidence 99999999999999842 1258999999998665543 1 12234556566654
Q ss_pred -HcCCCCCCCCcccHHHHHHHHHHhh
Q 008643 322 -RLGFLAKGTDVSPIIPALEAIWQNS 346 (558)
Q Consensus 322 -~~g~~~~~~Di~~l~~~l~~l~~~~ 346 (558)
.+|+ +...|+|++|++|.+++.+.
T Consensus 282 LgLGw-S~pCDvWSiGCIL~ElytG~ 306 (415)
T KOG0671|consen 282 LGLGW-SQPCDVWSIGCILVELYTGE 306 (415)
T ss_pred eccCc-CCccCceeeeeEEEEeeccc
Confidence 4565 55689999999999998753
No 424
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.51 E-value=1.7e-13 Score=128.02 Aligned_cols=130 Identities=21% Similarity=0.256 Sum_probs=97.0
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+|++.|..++||+++. +|+.|++|+..++... ..++.
T Consensus 4 ~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~~-----------------------------------------~~~~~ 40 (170)
T cd05151 4 SPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTEL-----------------------------------------LINRE 40 (170)
T ss_pred eecCCcccCceEEEEE--CCeEEEEEeCCCCccc-----------------------------------------ccCHH
Confidence 6899999999999998 4889999997665210 12334
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHCCc---
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGL--- 264 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi--- 264 (558)
.|+..+..+... ..+|+++....+..+++|||++|.++.+.. ........++...+..||..++
T Consensus 41 ~E~~~l~~l~~~------~~~P~~~~~~~~~~~lv~e~i~G~~l~~~~-------~~~~~~~~~l~~~l~~LH~~~~~~~ 107 (170)
T cd05151 41 NEAENSKLAAEA------GIGPKLYYFDPETGVLITEFIEGSELLTED-------FSDPENLEKIAKLLKKLHSSPLPDL 107 (170)
T ss_pred HHHHHHHHHHHh------CCCCceEEEeCCCCeEEEEecCCCcccccc-------ccCHHHHHHHHHHHHHHhCCCCCCc
Confidence 455555555432 136888876666779999999999887530 1112345678899999999885
Q ss_pred --eecCCCCCCEEEecCCCeEEeecCcccccC
Q 008643 265 --FHGDPHPGNIFAMRDGRIAYVDFGNVAELS 294 (558)
Q Consensus 265 --~H~DlhPgNIlv~~dg~l~liDFGl~~~l~ 294 (558)
+|+|+||+||+++ +++++++|||.+..-+
T Consensus 108 ~~~HgD~~~~Nil~~-~~~~~liDf~~a~~~~ 138 (170)
T cd05151 108 VPCHNDLLPGNFLLD-DGRLWLIDWEYAGMND 138 (170)
T ss_pred eeecCCCCcCcEEEE-CCeEEEEecccccCCC
Confidence 9999999999998 7889999999987543
No 425
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.48 E-value=2.9e-13 Score=129.26 Aligned_cols=175 Identities=23% Similarity=0.336 Sum_probs=99.6
Q ss_pred EEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhh---hccCCChHHHHHHHHHhhHhhhcHHHHHHHH
Q 008643 117 QVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISI---QKLGCNAELIVDEFGEKLLEELDYTLEARNM 193 (558)
Q Consensus 117 qVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~---~~~~~~~~~iv~e~~~~l~~Eld~~~Ea~n~ 193 (558)
-||.|.. .+|++||||+-|.+... .+. .......-.. .....+... ........|++++
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~-Fk~-------~~~y~~~~~r~~~~~~~~~~~~---------~~~~~~~~E~~~L 62 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTS-FKR-------RKKYRDYDYRFKKYRHKSSWRY---------LIREWAKKEFRNL 62 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---S-S-H-------HHHHTTTSTTSTTC--G--CHH---------HHHHHHHHHHHHH
T ss_pred CEEEEEC-CCCCEEEEEEeccCceE-EEE-------eeeeecccchhcccccccCHHH---------HHHHHHHHHHHHH
Confidence 3899999 78999999999876322 111 1111110000 000011111 1122345678887
Q ss_pred HHHHHhcCCCCCeeeceeeecCCCceEEEEeeeC--CCCCCCHHHHhcCCCCHHHHHHHHHHH-HHHHHHHCCceecCCC
Q 008643 194 EDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWID--GIRCTDPQAIKGAGIDVGGFLTVGVSA-ALRQLLEFGLFHGDPH 270 (558)
Q Consensus 194 ~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~--G~~L~d~~~~~~~~~~~~~~~~~~v~~-~L~~Lh~~Gi~H~Dlh 270 (558)
.+++ ...+.+|+++. .++.+||||||+ |.++..+........+....+ .++.. ....+|..|++|+|++
T Consensus 63 ~~l~-----~~Gv~vP~p~~--~~~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~-~~il~~~~~~~~~~givHGDLs 134 (188)
T PF01163_consen 63 KRLY-----EAGVPVPKPYD--YNRNVIVMEYIGEDGVPLPRLKDVDLSPEEPKELL-EEILEEIIKMLHKAGIVHGDLS 134 (188)
T ss_dssp HHCC-----CTT-SS--EEE--EETTEEEEE--EETTEEGGCHHHCGGGGSTHHHHH-HHHHHHHHHHHHCTTEEESS-S
T ss_pred HHHH-----HCCccCCcEEE--EeCCEEEEEecCCCccchhhHHhccccchhHHHHH-HHHHHHHHHHHHhcCceecCCC
Confidence 7763 34688999985 467899999999 888877544332223344444 44444 5556789999999999
Q ss_pred CCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCC
Q 008643 271 PGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGF 325 (558)
Q Consensus 271 PgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~ 325 (558)
+.||+++.+ ++.+||||.+.....+.... ++.+|...+..-+-+.|.
T Consensus 135 ~~NIlv~~~-~~~iIDf~qav~~~~p~a~~-------~l~RDi~ni~~fF~~~~~ 181 (188)
T PF01163_consen 135 EYNILVDDG-KVYIIDFGQAVDSSHPNAEE-------LLRRDIENIIRFFKKKGV 181 (188)
T ss_dssp TTSEEEETT-CEEE--GTTEEETTSTTHHH-------HHHHHHHHHHHHHHCCC-
T ss_pred hhhEEeecc-eEEEEecCcceecCCccHHH-------HHHHHHHHHHHHHHHhCC
Confidence 999999866 99999999998877544332 334677777666655553
No 426
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.46 E-value=6.5e-13 Score=119.88 Aligned_cols=133 Identities=21% Similarity=0.312 Sum_probs=96.4
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
++++.|+++.||+++. ++..++||+.++... +.++.
T Consensus 4 ~~i~~g~~~~v~~~~~--~~~~~~iK~~~~~~~------------------------------------------~~~~~ 39 (155)
T cd05120 4 KLLKGGLTNRVYLLGT--KDEDYVLKINPSREK------------------------------------------GADRE 39 (155)
T ss_pred eecccccccceEEEEe--cCCeEEEEecCCCCc------------------------------------------hhHHH
Confidence 6799999999999998 348899999876532 00122
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCC--CceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHC---
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLS--GSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEF--- 262 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~--~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~--- 262 (558)
.|...+.++... ...+|+++.... +..+++|||++|..+... .......+..++..++.++|..
T Consensus 40 ~e~~~~~~l~~~-----~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~------~~~~~~~~~~~~~~~l~~lh~~~~~ 108 (155)
T cd05120 40 REVAILQLLARK-----GLPVPKVLASGESDGWSYLLMEWIEGETLDEV------SEEEKEDIAEQLAELLAKLHQLPLL 108 (155)
T ss_pred HHHHHHHHHHHc-----CCCCCeEEEEcCCCCccEEEEEecCCeecccC------CHHHHHHHHHHHHHHHHHHhCCCce
Confidence 333333344332 345666665433 468999999999888653 1122344567788999999984
Q ss_pred CceecCCCCCCEEEecCCCeEEeecCcccccCh
Q 008643 263 GLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQ 295 (558)
Q Consensus 263 Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~ 295 (558)
|++|+|+||+||++++++.++++|||.+...++
T Consensus 109 ~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~~~ 141 (155)
T cd05120 109 VLCHGDLHPGNILVDDGKILGIIDWEYAGYGPP 141 (155)
T ss_pred EEEecCCCcceEEEECCcEEEEEecccccCCCh
Confidence 799999999999999989999999999876544
No 427
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.44 E-value=1.3e-12 Score=125.50 Aligned_cols=166 Identities=20% Similarity=0.236 Sum_probs=108.9
Q ss_pred ceeeeeeccEEEEEEEcC------CCcEEEEEEecCCChhhHHHHHHHHHHHHHHhh---hhhhhccCCChHHHHHHHHH
Q 008643 108 QTIAAASLGQVYRATLRE------TGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLN---GISIQKLGCNAELIVDEFGE 178 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~------~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~---~~~~~~~~~~~~~iv~e~~~ 178 (558)
-+||.|-=+.||.|.... .+..||||+.|....+--. ...++. ++.......++..++..+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~--------~~~y~~~~~rf~~~~~k~~~~~~~~~w-- 72 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKN--------RDKYIKDDYRFKDRFSKLNPRKIIRMW-- 72 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcC--------hhhhccCCcccccCcCCCCHHHHHHHH--
Confidence 378999999999998732 2579999998865322100 011110 000000112333333333
Q ss_pred hhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCH--HHHHHHHHHHHH
Q 008643 179 KLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDV--GGFLTVGVSAAL 256 (558)
Q Consensus 179 ~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~--~~~~~~~v~~~L 256 (558)
-..|.+++.+++.. .+.+|.++. ..+.+|||||+.|..+... .++....+. ...+..++..++
T Consensus 73 -------a~kE~r~L~rl~~~-----Gv~vP~pi~--~~~~~lvME~Ig~~~~~~~-~Lkd~~~~~~~~~~i~~~i~~~l 137 (197)
T cd05146 73 -------AEKEMHNLKRMQKA-----GIPCPEVVV--LKKHVLVMSFIGDDQVPAP-KLKDAKLNDEEMKNAYYQVLSMM 137 (197)
T ss_pred -------HHHHHHHHHHHHHc-----CCCCCeEEE--ecCCEEEEEEcCCCCccch-hhhccccCHHHHHHHHHHHHHHH
Confidence 24678898888764 588999986 4788999999987544321 122222222 223456788888
Q ss_pred HHH-HHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHH
Q 008643 257 RQL-LEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQ 299 (558)
Q Consensus 257 ~~L-h~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~ 299 (558)
..+ |..|++|+||+|.||++. +|+++++|||.+-..+.....
T Consensus 138 ~~l~H~~glVHGDLs~~NIL~~-~~~v~iIDF~qav~~~hp~a~ 180 (197)
T cd05146 138 KQLYKECNLVHADLSEYNMLWH-DGKVWFIDVSQSVEPTHPHGL 180 (197)
T ss_pred HHHHHhCCeecCCCCHHHEEEE-CCcEEEEECCCceeCCCCCHH
Confidence 877 899999999999999996 688999999999888755433
No 428
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.43 E-value=1.2e-12 Score=130.27 Aligned_cols=149 Identities=19% Similarity=0.261 Sum_probs=96.3
Q ss_pred cceee-eeeccEEEEEEEcCCCcEEEEEEec-CCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhh
Q 008643 107 SQTIA-AASLGQVYRATLRETGEDVAIKVQR-PGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEEL 184 (558)
Q Consensus 107 ~~pIg-~Gs~GqVy~a~~~~~G~~VAVKv~r-p~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~El 184 (558)
...|| .|+.|.||.+.. +|+.++||..+ +++...+.++-... .....-
T Consensus 36 ~~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~----------------------------~~~~~~ 85 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLF----------------------------TGLERT 85 (239)
T ss_pred CceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccc----------------------------cchhhh
Confidence 35787 899999999988 58899999764 33322111110000 000111
Q ss_pred cHHHHHHHHHHHHHhcCCCCCeeeceeeecC------CCceEEEEeeeCC-CCCCCHHHHhcCCCCHHHHHHHHHHHHHH
Q 008643 185 DYTLEARNMEDFLENFKDDPTVKIPRVYKRL------SGSRVLVMEWIDG-IRCTDPQAIKGAGIDVGGFLTVGVSAALR 257 (558)
Q Consensus 185 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~------~~~~vLvmE~i~G-~~L~d~~~~~~~~~~~~~~~~~~v~~~L~ 257 (558)
.+.+|...+.++.. ..+.+|.++... ....+++|||++| .+|.+.. .....+. ....++..++.
T Consensus 86 r~~rE~~ll~~L~~-----~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l--~~~~l~~--~~~~~i~~~l~ 156 (239)
T PRK01723 86 RAFAEFRLLAQLYE-----AGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALL--QEAPLSE--EQWQAIGQLIA 156 (239)
T ss_pred HHHHHHHHHHHHHh-----CCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHH--hcCCCCH--HHHHHHHHHHH
Confidence 12344555555532 345556554321 1233599999998 5665542 2222232 23567899999
Q ss_pred HHHHCCceecCCCCCCEEEecCCCeEEeecCcccccC
Q 008643 258 QLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELS 294 (558)
Q Consensus 258 ~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~ 294 (558)
+||+.||+|+|+||+|||+++++.++++|||.+..-.
T Consensus 157 ~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~~~ 193 (239)
T PRK01723 157 RFHDAGVYHADLNAHNILLDPDGKFWLIDFDRGELRT 193 (239)
T ss_pred HHHHCCCCCCCCCchhEEEcCCCCEEEEECCCcccCC
Confidence 9999999999999999999999999999999988765
No 429
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.41 E-value=7.2e-13 Score=153.78 Aligned_cols=147 Identities=10% Similarity=-0.003 Sum_probs=94.2
Q ss_pred HHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCH--HHHHHHHHHHHHHHHHHCCceecC
Q 008643 191 RNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDV--GGFLTVGVSAALRQLLEFGLFHGD 268 (558)
Q Consensus 191 ~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~--~~~~~~~v~~~L~~Lh~~Gi~H~D 268 (558)
.|+.++.+.|.... |... .....+.+|||++ ++|.++.......++. ...+..|++.||.|||++||+|||
T Consensus 33 ~~~~~~~~~~~~~~----~~~~--~~~~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrD 105 (793)
T PLN00181 33 DYVRSLLGSHKEGN----LDGL--DDDSIVRALECED-VSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHN 105 (793)
T ss_pred HHHHHhhcccCCcc----cccc--ccchhhhhhccCC-ccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence 47777777663321 1111 1223478899874 4777654322222333 345788999999999999999999
Q ss_pred CCCCCEEEecCCCeEEeec-------------------CcccccChhh---HHHHHH-------HHHHHHhcCHHHHHHH
Q 008643 269 PHPGNIFAMRDGRIAYVDF-------------------GNVAELSQQN---KQILID-------AVVHAVNEDYAEMAND 319 (558)
Q Consensus 269 lhPgNIlv~~dg~l~liDF-------------------Gl~~~l~~~~---~~~l~~-------~~~~~~~~d~~~~a~~ 319 (558)
+||+|||++..|+++++|| |+++...... ...... .......++..|+|||
T Consensus 106 lKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 185 (793)
T PLN00181 106 VRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPE 185 (793)
T ss_pred CCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChh
Confidence 9999999976555555555 4443321100 000000 0001123567799999
Q ss_pred HHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 320 FTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 320 ~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
++..+.++..+|+|++|+.+++++.
T Consensus 186 ~~~~~~~~~~sDVwSlGviL~ELl~ 210 (793)
T PLN00181 186 EDNGSSSNCASDVYRLGVLLFELFC 210 (793)
T ss_pred hhccCCCCchhhhhhHHHHHHHHhh
Confidence 9888888999999999999999987
No 430
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.39 E-value=1.7e-12 Score=148.20 Aligned_cols=185 Identities=20% Similarity=0.230 Sum_probs=118.1
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.||.|+||+||+|.. .+|+.||+|+++|...- |++|...+...+ .
T Consensus 703 ~~e~G~g~y~~vy~a~~-~~~~~~alK~e~P~~~W----EfYI~~q~~~RL-----------------------k----- 749 (974)
T KOG1166|consen 703 SKEIGEGSYGSVYVATH-SNGKLVALKVEKPPNPW----EFYICLQVMERL-----------------------K----- 749 (974)
T ss_pred EeeeccccceEEEEeec-CCCcEEEEEeecCCCce----eeeehHHHHHhh-----------------------c-----
Confidence 36799999999999999 46999999999987543 333333322111 1
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCH--HHHHHHHHHHHHHHHHHCCc
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDV--GGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~--~~~~~~~v~~~L~~Lh~~Gi 264 (558)
...-+.+..+...+. +.+..+|++||.+-|+|-|+.. .....+. .-++..+++..+++||.+||
T Consensus 750 ~~~~~~~~~~~~a~~-------------~~~~S~lv~ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~lH~~~I 815 (974)
T KOG1166|consen 750 PQMLPSIMHISSAHV-------------FQNASVLVSEYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEHLHAMGI 815 (974)
T ss_pred hhhhcchHHHHHHHc-------------cCCcceeeeeccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHHHHhcce
Confidence 000122222322221 2344589999999999988755 2223333 34567889999999999999
Q ss_pred eecCCCCCCEEEecC-------CCeEEeecCcccccC---hhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCccc
Q 008643 265 FHGDPHPGNIFAMRD-------GRIAYVDFGNVAELS---QQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSP 334 (558)
Q Consensus 265 ~H~DlhPgNIlv~~d-------g~l~liDFGl~~~l~---~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~ 334 (558)
+|+||||.|+++... --++|||||-+-.+. +.++- ....++-..-..++.....-+..+|.+-
T Consensus 816 IHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~~~~F-------~~~~~td~f~C~EM~~grpWtYq~DyfG 888 (974)
T KOG1166|consen 816 IHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPDGTKF-------KAVWHTDLFDCIEMREGRPWTYQIDYFG 888 (974)
T ss_pred ecccCCcceeEeecccCCCCcccceEEEecccceeeeEcCCCcEE-------eeeeccccchhHHHhcCCCCchhhhhHH
Confidence 999999999999632 359999999875443 22110 0011122222334444444556678888
Q ss_pred HHHHHHHHHHh
Q 008643 335 IIPALEAIWQN 345 (558)
Q Consensus 335 l~~~l~~l~~~ 345 (558)
+..+++-|+.+
T Consensus 889 lAa~~h~mLFG 899 (974)
T KOG1166|consen 889 LAATVHVMLFG 899 (974)
T ss_pred HHHHHHHHHHH
Confidence 88777777643
No 431
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.34 E-value=1.5e-11 Score=114.99 Aligned_cols=139 Identities=27% Similarity=0.288 Sum_probs=99.9
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
.++++|.=+.+|.+.+ -|.++++|..-|..-..-..|..+ ..| ...
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~kl-------------------------------rr~-Rt~ 47 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKL-------------------------------RRE-RTR 47 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHH-------------------------------HHH-HHH
Confidence 4678899999999977 466789997655432211222211 111 135
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHCCceec
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGLFHG 267 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi~H~ 267 (558)
+|++.+.+.+.. .|.+|.+|.-......|+|||++|..+.+..... . .-+...+-.-+.-||..||+|+
T Consensus 48 ~Earil~~a~~~-----GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~~~----~--~~~~r~vG~~vg~lH~~givHG 116 (204)
T COG3642 48 REARILAKAREA-----GVPVPIVYDVDPDNGLIVMEYIEGELLKDALEEA----R--PDLLREVGRLVGKLHKAGIVHG 116 (204)
T ss_pred HHHHHHHHHHHc-----CCCCCeEEEEcCCCCEEEEEEeCChhHHHHHHhc----c--hHHHHHHHHHHHHHHhcCeecC
Confidence 678888887664 7889999998888889999999998887653222 1 2234445566778999999999
Q ss_pred CCCCCCEEEecCCCeEEeecCcccc
Q 008643 268 DPHPGNIFAMRDGRIAYVDFGNVAE 292 (558)
Q Consensus 268 DlhPgNIlv~~dg~l~liDFGl~~~ 292 (558)
||.+.||++.. +++.++|||+...
T Consensus 117 DLTtsNiIl~~-~~i~~IDfGLg~~ 140 (204)
T COG3642 117 DLTTSNIILSG-GRIYFIDFGLGEF 140 (204)
T ss_pred CCccceEEEeC-CcEEEEECCcccc
Confidence 99999999954 5599999999863
No 432
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.34 E-value=4.8e-13 Score=143.79 Aligned_cols=223 Identities=17% Similarity=0.206 Sum_probs=158.8
Q ss_pred eeeeeccEEEEEEE---cCCCcEEEEEEecCCChhh-HHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhc
Q 008643 110 IAAASLGQVYRATL---RETGEDVAIKVQRPGIEPI-IYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELD 185 (558)
Q Consensus 110 Ig~Gs~GqVy~a~~---~~~G~~VAVKv~rp~~~~~-i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld 185 (558)
+|.|++|.|+.++- ...|.-+|+|+++..-... ... .
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~---------------------------------------~ 42 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT---------------------------------------H 42 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhccccccccccccc---------------------------------------c
Confidence 58899999987654 2456779999987532110 000 0
Q ss_pred HHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC-CCCHHHHHHHHHHHHHHHHHHCCc
Q 008643 186 YTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA-GIDVGGFLTVGVSAALRQLLEFGL 264 (558)
Q Consensus 186 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~-~~~~~~~~~~~v~~~L~~Lh~~Gi 264 (558)
-.....+.+....++.+.-+.+..+..++.+++++|+.|+.+......... .....+++...++.++.++|..|+
T Consensus 43 ----t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~i 118 (612)
T KOG0603|consen 43 ----TKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGI 118 (612)
T ss_pred ----cccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHH
Confidence 011112333344566777777777778899999999999887653221111 122334566678889999999999
Q ss_pred eecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHH
Q 008643 265 FHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQ 344 (558)
Q Consensus 265 ~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~ 344 (558)
+|+|+|+.||+++.+|++++.|||..+..-+.... ||++.|||+++.+ | ....+|.|++++...++++
T Consensus 119 iyrd~k~enilld~~Ghi~~tdfglske~v~~~~~----------cgt~eymApEI~~-g-h~~a~D~ws~gvl~fellt 186 (612)
T KOG0603|consen 119 AYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA----------CGTYEYRAPEIIN-G-HLSAADWWSFGVLAFELLT 186 (612)
T ss_pred HHhcccccceeecccCccccCCchhhhHhHhhhhc----------ccchhhhhhHhhh-c-cCCcccchhhhhhHHHHhh
Confidence 99999999999999999999999998876554432 7899999999999 3 3567899999999999998
Q ss_pred hhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 345 NSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 345 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
+. .+|.. ++...+.+-.+.+|..++..+++++.. ....+|..+
T Consensus 187 g~-----~pf~~-----~~~~~Il~~~~~~p~~l~~~a~~~~~~---l~~r~p~nr 229 (612)
T KOG0603|consen 187 GT-----LPFGG-----DTMKRILKAELEMPRELSAEARSLFRQ---LFKRNPENR 229 (612)
T ss_pred CC-----CCCch-----HHHHHHhhhccCCchhhhHHHHHHHHH---HHhhCHHHH
Confidence 43 23322 344455566788999999999999876 666666433
No 433
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.31 E-value=7.6e-12 Score=125.19 Aligned_cols=194 Identities=26% Similarity=0.322 Sum_probs=128.8
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.+|.|+||+||++... ..+++|+..+...... .....+.
T Consensus 6 ~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~-------------------------------~~~~~~~------ 45 (384)
T COG0515 6 RKLGEGSFGEVYLARDR---KLVALKVLAKKLESKS-------------------------------KEVERFL------ 45 (384)
T ss_pred EeecCCCCeEEEEEEec---cEEEEEeechhhccch-------------------------------hHHHHHH------
Confidence 57899999999999994 8899998876533211 0001111
Q ss_pred HHHHHHHHHHHhcCCCC-CeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhc----CCCCHHHHHHHHHHHHHHHHHHC
Q 008643 188 LEARNMEDFLENFKDDP-TVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKG----AGIDVGGFLTVGVSAALRQLLEF 262 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~-~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~----~~~~~~~~~~~~v~~~L~~Lh~~ 262 (558)
.|.. ....+.+.+ .+.+-..+ ......+++++|+.|+.+.+...... ........+..+++.++.++|..
T Consensus 46 ~e~~----~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~ 120 (384)
T COG0515 46 REIQ----ILASLNHPPNIVKLYDFF-QDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK 120 (384)
T ss_pred HHHH----HHHHccCCcceeeEEEEE-ecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 1122 223333332 22222222 22233599999999999984433221 22233455778899999999999
Q ss_pred CceecCCCCCCEEEecCC-CeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc---CCCCCCCCcccHHHH
Q 008643 263 GLFHGDPHPGNIFAMRDG-RIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL---GFLAKGTDVSPIIPA 338 (558)
Q Consensus 263 Gi~H~DlhPgNIlv~~dg-~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~---g~~~~~~Di~~l~~~ 338 (558)
|++|||+||.||+++..+ .++++|||++..+.................++..+++|+.... +......|+|++|..
T Consensus 121 ~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~ 200 (384)
T COG0515 121 GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGIT 200 (384)
T ss_pred CeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHH
Confidence 999999999999999988 7999999999865543211100001123457888999999887 578888999999988
Q ss_pred HHHHHHhh
Q 008643 339 LEAIWQNS 346 (558)
Q Consensus 339 l~~l~~~~ 346 (558)
++.++...
T Consensus 201 ~~~~~~~~ 208 (384)
T COG0515 201 LYELLTGL 208 (384)
T ss_pred HHHHHhCC
Confidence 88866543
No 434
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=99.31 E-value=3.9e-11 Score=116.11 Aligned_cols=81 Identities=31% Similarity=0.522 Sum_probs=63.0
Q ss_pred CeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEE
Q 008643 205 TVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAY 284 (558)
Q Consensus 205 ~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~l 284 (558)
.+.+-+-.+.+++..+|+||||+|.++.+...+. .-+...+..++.++|.+|++|+||||||++++ ++.+++
T Consensus 104 yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~i~-------e~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~-~~~i~i 175 (229)
T PF06176_consen 104 YLAAEKKIFRYTSSYVLLMEYIEGVELNDIEDID-------EDLAEKIVEAIKQLHKHGFYHGDPHPGNFLVS-NNGIRI 175 (229)
T ss_pred eeeeeeeeccceeEEEEEEEEecCeecccchhcC-------HHHHHHHHHHHHHHHHcCCccCCCCcCcEEEE-CCcEEE
Confidence 3444455567788889999999999998864321 12334566789999999999999999999987 555999
Q ss_pred eecCccccc
Q 008643 285 VDFGNVAEL 293 (558)
Q Consensus 285 iDFGl~~~l 293 (558)
+||+..+..
T Consensus 176 ID~~~k~~~ 184 (229)
T PF06176_consen 176 IDTQGKRMS 184 (229)
T ss_pred EECcccccc
Confidence 999987754
No 435
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.29 E-value=4.9e-12 Score=142.32 Aligned_cols=240 Identities=22% Similarity=0.226 Sum_probs=154.1
Q ss_pred ChHhhhcccCcceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHH
Q 008643 97 PLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEF 176 (558)
Q Consensus 97 ~~~~~f~~~~~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~ 176 (558)
|.++-|+.| +.|..|++|-||..+++.+.+++|+|+.+.++.
T Consensus 80 p~e~df~~I--klisngAygavylvrh~~trqrfa~kiNkq~li------------------------------------ 121 (1205)
T KOG0606|consen 80 PSESDFNTI--KLISNGAYGAVYLVRHKETRQRFAMKINKQNLI------------------------------------ 121 (1205)
T ss_pred CCcccccee--EeeccCCCCceeeeeccccccchhhcccccchh------------------------------------
Confidence 445545555 789999999999999988999999998765421
Q ss_pred HHhhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHH
Q 008643 177 GEKLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAAL 256 (558)
Q Consensus 177 ~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L 256 (558)
.+|+..| .+++.| | +++.+. ++..|--+.. ...++
T Consensus 122 -------------lRnilt~----a~npfv---------------v------gDc~tl--lk~~g~lPvd-----mvla~ 156 (1205)
T KOG0606|consen 122 -------------LRNILTF----AGNPFV---------------V------GDCATL--LKNIGPLPVD-----MVLAV 156 (1205)
T ss_pred -------------hhccccc----cCCcce---------------e------chhhhh--cccCCCCcch-----hhHHh
Confidence 2332222 333433 1 233222 1122221211 25789
Q ss_pred HHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccC----hhhHHHHHHHHHH-----HHhcCHHHHHHHHHHcCCCC
Q 008643 257 RQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELS----QQNKQILIDAVVH-----AVNEDYAEMANDFTRLGFLA 327 (558)
Q Consensus 257 ~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~----~~~~~~l~~~~~~-----~~~~d~~~~a~~~~~~g~~~ 327 (558)
+|+|..||+|||+||.|++|+.-|++|+.|||++...- ...++..++-..| -+++++.|.+|+++-+--+.
T Consensus 157 Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgyg 236 (1205)
T KOG0606|consen 157 EYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYG 236 (1205)
T ss_pred HhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccC
Confidence 99999999999999999999999999999999876432 2223333333333 25899999999999887788
Q ss_pred CCCCcccHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhc---CCCCchhHHHHHHHHHHHHhhhhhcCCCCChhHh
Q 008643 328 KGTDVSPIIPALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNY---RIRIPERFSLVIRSLLTQEGICFTLKPDFKFLEV 404 (558)
Q Consensus 328 ~~~Di~~l~~~l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~---~~~lP~~~~~~~rsl~~legi~~~LdP~~~~~~~ 404 (558)
..+|+|++|.++|+++-+... +....-.+++.++......+ ...+|++...++..|+..--+|+..-+ -.+.-.
T Consensus 237 kpvdwwamGiIlyeFLVgcvp--ffGdtpeelfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~-ga~evk 313 (1205)
T KOG0606|consen 237 KPVDWWAMGIILYEFLVGCVP--FFGDTPEELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTG-GALEVK 313 (1205)
T ss_pred CCccHHHHHHHHHHHheeeee--ccCCCHHHHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhcccc-hhhhhh
Confidence 999999999999998864322 11112223333322222222 356889999999999877666655544 444445
Q ss_pred hhHHHHHHhhcCCCHHHHHHH
Q 008643 405 AYPYVAKRLLTDPNPALRERL 425 (558)
Q Consensus 405 a~p~v~~~ll~~~~p~~r~~l 425 (558)
+.+|+.. .|.+.-+|..+
T Consensus 314 ~h~ff~~---LDw~~llRqka 331 (1205)
T KOG0606|consen 314 QHGFFQL---LDWKSLLRQKA 331 (1205)
T ss_pred hccceee---cccchhhhhhc
Confidence 5555432 24444444444
No 436
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.28 E-value=2.8e-12 Score=129.56 Aligned_cols=240 Identities=20% Similarity=0.204 Sum_probs=121.4
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.++||.|+++.||.+++..||+++|||+..-.. +.-..+++-++.-.-....+.. .-+
T Consensus 17 ~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~-~~~~~~~~~~~~e~l~~~~~~~---~~~------------------ 74 (288)
T PF14531_consen 17 GRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPA-DASANEYEQLKEEQLAITLFPG---VKN------------------ 74 (288)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEEESS-TTHTTHHHHHHHHHHGGGGSTT-----S------------------
T ss_pred ccccccCCceEEEEEEEccCCceEEEEEEeccc-ccchHHHHHHHHHHHHhhhhcc---CCC------------------
Confidence 578999999999999999999999999864322 2223333333332211111000 001
Q ss_pred HHHHHHHHHHHHhcCCCCCeeece---eeecCC-------CceEEEEeeeCCCCCCCHHHH-hcCCCC-------HHHHH
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPR---VYKRLS-------GSRVLVMEWIDGIRCTDPQAI-KGAGID-------VGGFL 248 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~---v~~~~~-------~~~vLvmE~i~G~~L~d~~~~-~~~~~~-------~~~~~ 248 (558)
...+.+....+.....+.++. ....-. -..++.|+-+.+ +|.+.... ...... ....+
T Consensus 75 ---p~~a~~~~r~l~P~d~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~-dL~~~~~~l~~~~~~~~~l~~~arl~l 150 (288)
T PF14531_consen 75 ---PKEAYRHLRFLVPLDLLRIPGKPPFFERGPGQSIYWVLNRFLLMPRAQG-DLQDLVEALFSRAQTHSPLAFAARLSL 150 (288)
T ss_dssp ---HHHHHHHH-B---SEEEEETTS-SEEEECETTEEEEEESEEEEEE--SE-EHHHHHHHHHHHTTTSHHHHHHHHHHH
T ss_pred ---HHHHHHhceEEeeeEEEEEcCCCcceecCCCCccceeehhhhccchhhh-cHHHHHHHHhhcccccchhHHHHHHHH
Confidence 111111112222222222221 111000 123667777653 44443221 111111 11234
Q ss_pred HHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC----
Q 008643 249 TVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLG---- 324 (558)
Q Consensus 249 ~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g---- 324 (558)
..|+...+.++|..|++|+|++|.|++++++|.+.|.||+.+.......... ..+..+.+|+.....
T Consensus 151 T~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~---------~~~~~~~PPe~~~~~~~~~ 221 (288)
T PF14531_consen 151 TVQMIRLVANLHSYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRCS---------EFPVAFTPPELESCAGQFG 221 (288)
T ss_dssp HHHHHHHHHHHHHTTEEEST-SGGGEEE-TTS-EEE--GGGEEETTEEEEGG---------GS-TTTS-HHHHHHHTSCH
T ss_pred HHHHHHHHHHHhhcceEecccceeeEEEcCCCCEEEcChHHHeecCceeecc---------CCCcccCChhhhhhhcccC
Confidence 5778899999999999999999999999999999999999887665533210 011222333333321
Q ss_pred ----CCCCCCCcccHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHH
Q 008643 325 ----FLAKGTDVSPIIPALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLT 387 (558)
Q Consensus 325 ----~~~~~~Di~~l~~~l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~ 387 (558)
.++...|.|.+|..++.+|....+.+........ .. ....-. .+|..+..+++.|+.
T Consensus 222 ~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~--~~---~f~~C~-~~Pe~v~~LI~~lL~ 282 (288)
T PF14531_consen 222 QNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADP--EW---DFSRCR-DMPEPVQFLIRGLLQ 282 (288)
T ss_dssp HSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTS--GG---GGTTSS----HHHHHHHHHHT-
T ss_pred cccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccc--cc---cchhcC-CcCHHHHHHHHHHcc
Confidence 2456679999999999999875544432211110 00 111223 678888777777653
No 437
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=99.22 E-value=4.3e-10 Score=110.05 Aligned_cols=184 Identities=24% Similarity=0.297 Sum_probs=122.4
Q ss_pred eeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHHH
Q 008643 109 TIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYTL 188 (558)
Q Consensus 109 pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~~ 188 (558)
+|.+|--+.||+|.. .++..||||+.+.....--..+-++...- + ......+...++..+ -+.
T Consensus 55 ~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~-----R--f~~~~~~rr~lv~~W---------~~k 117 (268)
T COG1718 55 CISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDP-----R--FRNSRSNRRKLVFAW---------ARK 117 (268)
T ss_pred eecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcCh-----h--hhcCCCCHHHHHHHH---------HHH
Confidence 788888999999998 68999999999876443222221111110 0 011223555555554 345
Q ss_pred HHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCH--HHHHHHHHHHHHHHHHH-CCce
Q 008643 189 EARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDV--GGFLTVGVSAALRQLLE-FGLF 265 (558)
Q Consensus 189 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~--~~~~~~~v~~~L~~Lh~-~Gi~ 265 (558)
|-+|+.+.++. .|++|+++. .-..+|+||||..... -.-.++..+... ...+..++..++.-|.. .|++
T Consensus 118 Ef~NL~R~~eA-----GVrvP~Pi~--~~~nVLvMEfIg~~g~-pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LV 189 (268)
T COG1718 118 EFRNLKRAYEA-----GVRVPEPIA--FRNNVLVMEFIGDDGL-PAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLV 189 (268)
T ss_pred HHHHHHHHHHc-----CCCCCCcee--ecCCeEEEEeccCCCC-CCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCcc
Confidence 77898888764 588999887 4566999999965411 111223333222 34455566677776665 9999
Q ss_pred ecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCC
Q 008643 266 HGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGF 325 (558)
Q Consensus 266 H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~ 325 (558)
|+|+..=|||+. +|.+.+||||.+.......... ++.+|...++..|-+.|.
T Consensus 190 HgDLSEyNiL~~-~~~p~iID~~QaV~~~hp~a~e-------~L~RDv~Ni~~fF~r~gv 241 (268)
T COG1718 190 HGDLSEYNILVH-DGEPYIIDVSQAVTIDHPNAFE-------FLERDVRNIARFFRRKGV 241 (268)
T ss_pred cccchhhheEEE-CCeEEEEECccccccCCCchHH-------HHHHHHHHHHHHHHHcCC
Confidence 999999999998 8999999999998877544332 334677777777766554
No 438
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.16 E-value=3.5e-12 Score=143.59 Aligned_cols=203 Identities=17% Similarity=0.172 Sum_probs=118.4
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
.+.+|++-|=.|.+|++ +.|. |+|||.-.... .+++ +.|.+++.++-.-
T Consensus 28 ~~~LGstRFlKv~r~k~-~eG~-vVvKVFvk~~p-------------------------~~sL----~~~~qrL~~ik~~ 76 (1431)
T KOG1240|consen 28 VENLGSTRFLKVARAKD-REGL-VVVKVFVKQDP-------------------------TISL----RPFKQRLEEIKFA 76 (1431)
T ss_pred ecccCchhhhhhhhccC-CCce-EEEEEEeccCC-------------------------CCCc----hHHHHHHHHHHHH
Confidence 56899999999999999 5777 99998522110 0111 1222222222111
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC-CCCHHHHHHHHHHHHHHHHHHCCce
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA-GIDVGGFLTVGVSAALRQLLEFGLF 265 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~-~~~~~~~~~~~v~~~L~~Lh~~Gi~ 265 (558)
..+++|+.-|......+.. .|||-+|+.. +|.|....+.. ..-+.+.+.-|++.++.|+|..|+.
T Consensus 77 l~~~pn~lPfqk~~~t~kA-------------AylvRqyvkh-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVc 142 (1431)
T KOG1240|consen 77 LMKAPNCLPFQKVLVTDKA-------------AYLVRQYVKH-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVC 142 (1431)
T ss_pred hhcCCcccchHHHHHhhHH-------------HHHHHHHHhh-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCcc
Confidence 2234444433333222111 1444455432 34333222211 1223467888999999999999999
Q ss_pred ecCCCCCCEEEecCCCeEEeecCcccc--cChhhHHHHHHHHHHHHhcCHHHHHHHHHHc-----------CCCCCCCCc
Q 008643 266 HGDPHPGNIFAMRDGRIAYVDFGNVAE--LSQQNKQILIDAVVHAVNEDYAEMANDFTRL-----------GFLAKGTDV 332 (558)
Q Consensus 266 H~DlhPgNIlv~~dg~l~liDFGl~~~--l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~-----------g~~~~~~Di 332 (558)
|+|||.+||||+.-+-+.|.||..-+. +++++...+. .++-+..+..-|+|||-+-- +.++|.-|+
T Consensus 143 HGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~-fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDI 221 (1431)
T KOG1240|consen 143 HGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFT-FFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDI 221 (1431)
T ss_pred ccccccceEEEeeechhhhhcccccCCccCCCCCcccce-EEEecCCceeeecChHhhhccccccccCCcccccChhhhh
Confidence 999999999999999999999986653 2222221111 11112223334566554322 226778899
Q ss_pred ccHHHHHHHHHHhhcCCCCCCCCHHHH
Q 008643 333 SPIIPALEAIWQNSSGKGLADFNFRSV 359 (558)
Q Consensus 333 ~~l~~~l~~l~~~~~~~~~~~~~~~~l 359 (558)
.+.|+.+.++|.. +...|+..++
T Consensus 222 FS~GCViaELf~E----g~PlF~LSQL 244 (1431)
T KOG1240|consen 222 FSAGCVIAELFLE----GRPLFTLSQL 244 (1431)
T ss_pred hhhhHHHHHHHhc----CCCcccHHHH
Confidence 9999999999974 3345665554
No 439
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.13 E-value=1.8e-11 Score=136.60 Aligned_cols=119 Identities=13% Similarity=0.054 Sum_probs=90.7
Q ss_pred EeeeCCCCCCCHHHHh-cCCCCHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHH
Q 008643 223 MEWIDGIRCTDPQAIK-GAGIDVGGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQIL 301 (558)
Q Consensus 223 mE~i~G~~L~d~~~~~-~~~~~~~~~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l 301 (558)
||||++ +|....... .........+..|+..|++|+|..|+-|||+||.|++++.+|.+|++|||.+....-......
T Consensus 400 mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~ 478 (601)
T KOG0590|consen 400 MEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNI 478 (601)
T ss_pred hhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcchhh
Confidence 999999 887654333 344556678899999999999999999999999999999999999999999876543322211
Q ss_pred HHHHHHHHhcCHHHHHHHHHHcCCCCC-CCCcccHHHHHHHHHH
Q 008643 302 IDAVVHAVNEDYAEMANDFTRLGFLAK-GTDVSPIIPALEAIWQ 344 (558)
Q Consensus 302 ~~~~~~~~~~d~~~~a~~~~~~g~~~~-~~Di~~l~~~l~~l~~ 344 (558)
....-+.|.-.|+|||+.....+.| .+|+|+.+.++..|..
T Consensus 479 --~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~ 520 (601)
T KOG0590|consen 479 --HESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMIL 520 (601)
T ss_pred --hhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEec
Confidence 1122345777889999888766655 4899999877665554
No 440
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.12 E-value=1.2e-09 Score=102.02 Aligned_cols=147 Identities=24% Similarity=0.257 Sum_probs=103.0
Q ss_pred CcceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhc
Q 008643 106 SSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELD 185 (558)
Q Consensus 106 ~~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld 185 (558)
+.+++-+|.-|.|+++.. .|+...||-..+.--.--..|..+-+. +
T Consensus 11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~--------------------------R------ 56 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRK--------------------------R------ 56 (229)
T ss_pred cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHH--------------------------H------
Confidence 357899999999999998 799999997544322212222222221 1
Q ss_pred HHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCC-CCCHHHHh--cCCCCHH-HHHHHHHHHHHHHHHH
Q 008643 186 YTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIR-CTDPQAIK--GAGIDVG-GFLTVGVSAALRQLLE 261 (558)
Q Consensus 186 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~-L~d~~~~~--~~~~~~~-~~~~~~v~~~L~~Lh~ 261 (558)
..+|++-+.+++.. .+.+|.+|..-.....|.|||++|.+ +.+..... ....+.. .-..+.+-..+.-||.
T Consensus 57 t~~Ear~l~k~~~~-----GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ 131 (229)
T KOG3087|consen 57 TKQEARLLAKCRAL-----GIPAPRLIFIDTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHD 131 (229)
T ss_pred HHHHHHHHHHHHHh-----CCCCceEEEEecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhh
Confidence 24567777777665 68889999877788899999999943 33332211 1122332 2355667788899999
Q ss_pred CCceecCCCCCCEEEecCC-C--eEEeecCccc
Q 008643 262 FGLFHGDPHPGNIFAMRDG-R--IAYVDFGNVA 291 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~dg-~--l~liDFGl~~ 291 (558)
.+++|+|+..+||++.++| + +.++|||++.
T Consensus 132 ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 132 NDIIHGDLTTSNILLRSDGNQITPILIDFGLSS 164 (229)
T ss_pred CCeecccccccceEEecCCCcCceEEEeecchh
Confidence 9999999999999998775 3 4899999864
No 441
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.11 E-value=5.4e-10 Score=108.54 Aligned_cols=141 Identities=21% Similarity=0.246 Sum_probs=86.1
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+|++.|..+.||+++. .+|+.+++|+.+++.... ...++.
T Consensus 4 ~~l~~G~~n~~~~v~~-~~g~~~ilK~~~~~~~~~---------------------------------------~~~~~~ 43 (223)
T cd05154 4 RQLSGGQSNLTYLLTA-GGGRRLVLRRPPPGALLP---------------------------------------SAHDVA 43 (223)
T ss_pred eecCCCccceEEEEEe-cCCcceEEEeCCCcccCc---------------------------------------ccccHH
Confidence 7899999999999998 457899999876542100 001233
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCC-----ceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHHHHH------
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSG-----SRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVGVSA------ 254 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~-----~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~v~~------ 254 (558)
.|...+..+.. ..+.+|+++..... ..+++|||++|.++.+.... ...+.. ..+..++..
T Consensus 44 ~E~~~~~~l~~-----~~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH 116 (223)
T cd05154 44 REYRVLRALAG-----TGVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRDRLLR--PELSPEERRALARALADTLAALH 116 (223)
T ss_pred HHHHHHHHhhC-----CCCCCCCEEEECCCCCccCCceEEEEEeCCEecCCCCCC--CCCCHHHHHHHHHHHHHHHHHHh
Confidence 44444444432 14567777654333 45899999999887653200 000000 000111111
Q ss_pred -------------------------------------------HHHHHH-------HCCceecCCCCCCEEEec--CCCe
Q 008643 255 -------------------------------------------ALRQLL-------EFGLFHGDPHPGNIFAMR--DGRI 282 (558)
Q Consensus 255 -------------------------------------------~L~~Lh-------~~Gi~H~DlhPgNIlv~~--dg~l 282 (558)
.+.++. ..+++|+|+||+||++++ ++.+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~ 196 (223)
T cd05154 117 SVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVV 196 (223)
T ss_pred CCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEE
Confidence 112221 357899999999999998 5678
Q ss_pred EEeecCcccccCh
Q 008643 283 AYVDFGNVAELSQ 295 (558)
Q Consensus 283 ~liDFGl~~~l~~ 295 (558)
.++||+.+..-++
T Consensus 197 ~iID~e~~~~g~~ 209 (223)
T cd05154 197 AVLDWELATLGDP 209 (223)
T ss_pred EEEeccccccCCh
Confidence 9999999875443
No 442
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.11 E-value=2.7e-10 Score=106.90 Aligned_cols=83 Identities=20% Similarity=0.133 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcC
Q 008643 245 GGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLG 324 (558)
Q Consensus 245 ~~~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g 324 (558)
...+..|++.||.|||+.| ||+||+++.++.+++ ||++........ .++..|+||+++..+
T Consensus 19 ~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~~-----------~g~~~y~aPE~~~~~ 79 (176)
T smart00750 19 IWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPEQS-----------RVDPYFMAPEVIQGQ 79 (176)
T ss_pred HHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeeccccC-----------CCcccccChHHhcCC
Confidence 3457789999999999999 999999999999999 999887654321 368899999999988
Q ss_pred CCCCCCCcccHHHHHHHHHHhh
Q 008643 325 FLAKGTDVSPIIPALEAIWQNS 346 (558)
Q Consensus 325 ~~~~~~Di~~l~~~l~~l~~~~ 346 (558)
.+++.+|+|++|+.+++++++.
T Consensus 80 ~~~~~~DiwSlG~il~elltg~ 101 (176)
T smart00750 80 SYTEKADIYSLGITLYEALDYE 101 (176)
T ss_pred CCcchhhHHHHHHHHHHHHhCC
Confidence 8899999999999999999753
No 443
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.10 E-value=1e-10 Score=119.30 Aligned_cols=187 Identities=12% Similarity=0.071 Sum_probs=127.5
Q ss_pred CCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC-------CCCHHH--HHHHHHHHHHHHHHHCCceecCCCCC
Q 008643 202 DDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA-------GIDVGG--FLTVGVSAALRQLLEFGLFHGDPHPG 272 (558)
Q Consensus 202 ~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~-------~~~~~~--~~~~~v~~~L~~Lh~~Gi~H~DlhPg 272 (558)
|.+-..|-.+.-+.....+....+..-++|.....+-+. .+...+ ....|+.+|+.+||.+|++|.|+-..
T Consensus 346 H~nll~V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaR 425 (563)
T KOG1024|consen 346 HPNLLSVLGVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAAR 425 (563)
T ss_pred CCCccceeEEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhh
Confidence 444455556655555555666677766676655443221 111222 35678999999999999999999999
Q ss_pred CEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHhhcCCCCC
Q 008643 273 NIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNSSGKGLA 352 (558)
Q Consensus 273 NIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~~~~~~~~ 352 (558)
|.+|++.-++|++|=.+++.+-+..-.-+.+ --|+...+|+.+.+....++..+|+|+||..++++++- .+.|..
T Consensus 426 NCvIdd~LqVkltDsaLSRDLFP~DYhcLGD----nEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtl-g~~Pya 500 (563)
T KOG1024|consen 426 NCVIDDQLQVKLTDSALSRDLFPGDYHCLGD----NENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTL-GKLPYA 500 (563)
T ss_pred cceehhheeEEeccchhccccCcccccccCC----CCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhc-CCCCcc
Confidence 9999999999999999998876654322111 12445678998888888899999999999999999873 334555
Q ss_pred CCCHHHHHHHHHHHH-HhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 353 DFNFRSVTGQFNKLV-YNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 353 ~~~~~~l~~~l~~~~-~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
+++--++-..+.+-- ...|+.+|.++..++-- |+.++|+-+
T Consensus 501 eIDPfEm~~ylkdGyRlaQP~NCPDeLf~vMac-------CWallpeeR 542 (563)
T KOG1024|consen 501 EIDPFEMEHYLKDGYRLAQPFNCPDELFTVMAC-------CWALLPEER 542 (563)
T ss_pred ccCHHHHHHHHhccceecCCCCCcHHHHHHHHH-------HHhcCcccC
Confidence 555444333222111 13688999987654322 889999655
No 444
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=99.08 E-value=1.3e-09 Score=107.78 Aligned_cols=179 Identities=21% Similarity=0.299 Sum_probs=113.8
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
++||-|-=+.||.|.. ..|.++|||.-|-|... .+. .+.-...+.. ....+ .+..- -+.-.
T Consensus 97 ~~IGvGKEsdVY~~~~-~~g~~~~vKfHR~Grts-Frk----vk~~R~y~~~----~~h~s---Wl~~s------Rl~A~ 157 (304)
T COG0478 97 TKIGVGKESDVYVAID-PKGRKVAVKFHRLGRTS-FRK----VKRNRDYLAD----KEHGS---WLYVS------RLAAE 157 (304)
T ss_pred cccccCccceEEEEEC-CCCCEEEEEEeecCchh-hhh----hcchhhhhcc----ccCcc---hhhhH------HHHHH
Confidence 6899999999999999 68999999998877321 110 0000000000 00000 00000 01112
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHCCceec
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGLFHG 267 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi~H~ 267 (558)
+|...+.+++ +..+.||+++. .++++++|||++|..|....- ...++. -+...++.-+.-+.+.|++|+
T Consensus 158 rEf~~L~~L~-----~~G~~VP~P~~--~nRHaVvMe~ieG~eL~~~r~---~~en~~-~il~~il~~~~~~~~~GiVHG 226 (304)
T COG0478 158 REFEALQRLY-----PEGVKVPKPIA--WNRHAVVMEYIEGVELYRLRL---DVENPD-EILDKILEEVRKAYRRGIVHG 226 (304)
T ss_pred HHHHHHHHhh-----hcCCCCCCccc--cccceeeeehcccceeecccC---cccCHH-HHHHHHHHHHHHHHHcCcccc
Confidence 3344444442 34578899886 578899999999988876421 112233 334445666666779999999
Q ss_pred CCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHc
Q 008643 268 DPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRL 323 (558)
Q Consensus 268 DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~ 323 (558)
|+.+=||++++||.+.++||-.+...+......+ +.+|...+..-|-+.
T Consensus 227 DlSefNIlV~~dg~~~vIDwPQ~v~~~hp~a~e~-------l~RDv~nii~yFrrk 275 (304)
T COG0478 227 DLSEFNILVTEDGDIVVIDWPQAVPISHPDAEEL-------LERDVENIIKYFRRK 275 (304)
T ss_pred CCchheEEEecCCCEEEEeCcccccCCCCCHHHH-------HHhHHHHHHHHHHHh
Confidence 9999999999999999999999888776554432 235666666555443
No 445
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.06 E-value=3.8e-11 Score=122.62 Aligned_cols=154 Identities=17% Similarity=0.165 Sum_probs=98.9
Q ss_pred HHHHHHHHHHhcCCCCC------eeec-----eeeecC---CCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHH
Q 008643 189 EARNMEDFLENFKDDPT------VKIP-----RVYKRL---SGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSA 254 (558)
Q Consensus 189 Ea~n~~~~~~~~~~~~~------v~vP-----~v~~~~---~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~ 254 (558)
.|+|++++...|.+.-. +.-| +.|.+. ....|+||...+. +|..+...+..+.....++..|++.
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~~s~r~~~~~laQlLE 352 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRHRSYRTGRVILAQLLE 352 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCCCchHHHHHHHHHHHH
Confidence 47888887777765311 1111 223222 2346899987653 5555444344444455678889999
Q ss_pred HHHHHHHCCceecCCCCCCEEEe--cCC--CeEEeecCcccccChhhHHHHHHHHHH--HHhcCHHHHHHHHHHcCC---
Q 008643 255 ALRQLLEFGLFHGDPHPGNIFAM--RDG--RIAYVDFGNVAELSQQNKQILIDAVVH--AVNEDYAEMANDFTRLGF--- 325 (558)
Q Consensus 255 ~L~~Lh~~Gi~H~DlhPgNIlv~--~dg--~l~liDFGl~~~l~~~~~~~l~~~~~~--~~~~d~~~~a~~~~~~g~--- 325 (558)
++.+||.+|+-|||+|.+|||+. +|+ .+++.|||.+---+...-. .....+ -..|+..-|||++...-.
T Consensus 353 av~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlq--lpy~S~~Vd~GGNa~lmAPEi~ta~PGp~ 430 (598)
T KOG4158|consen 353 AVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQ--LPYESDEVDLGGNAKLMAPEIATAVPGPN 430 (598)
T ss_pred HHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccc--cccccccccCCCcceecchhhhhcCCCCc
Confidence 99999999999999999999995 343 6899999987422110000 000011 124677778999876421
Q ss_pred --C-CCCCCcccHHHHHHHHHHh
Q 008643 326 --L-AKGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 326 --~-~~~~Di~~l~~~l~~l~~~ 345 (558)
+ -.++|.|+.|..-|++|+.
T Consensus 431 avvny~kAD~WA~GalaYEIfg~ 453 (598)
T KOG4158|consen 431 AVVNYEKADTWAAGALAYEIFGR 453 (598)
T ss_pred eeeccchhhhhhhhhhHHHHhcc
Confidence 1 1357999999999999975
No 446
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.97 E-value=7.9e-09 Score=104.40 Aligned_cols=102 Identities=15% Similarity=0.083 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHHhcCCCCCeeecee--eecC-----CCceEEEEeeeCCC-CCCCHHHHh-cCCC--CHHHHHHHHHHH
Q 008643 186 YTLEARNMEDFLENFKDDPTVKIPRV--YKRL-----SGSRVLVMEWIDGI-RCTDPQAIK-GAGI--DVGGFLTVGVSA 254 (558)
Q Consensus 186 ~~~Ea~n~~~~~~~~~~~~~v~vP~v--~~~~-----~~~~vLvmE~i~G~-~L~d~~~~~-~~~~--~~~~~~~~~v~~ 254 (558)
+.+|.+++.++.+. .+.+|.+ |.+. ....+||||+++|. ++.++.... .... .....+..++..
T Consensus 75 a~rE~~~l~~L~~~-----GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~ 149 (268)
T PRK15123 75 ADREWRAIHRLHEV-----GVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVAT 149 (268)
T ss_pred HHHHHHHHHHHHHc-----CCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHH
Confidence 45667888888664 5667766 4322 23578999999985 666653211 1111 233456677899
Q ss_pred HHHHHHHCCceecCCCCCCEEEec-------CCCeEEeecCcccc
Q 008643 255 ALRQLLEFGLFHGDPHPGNIFAMR-------DGRIAYVDFGNVAE 292 (558)
Q Consensus 255 ~L~~Lh~~Gi~H~DlhPgNIlv~~-------dg~l~liDFGl~~~ 292 (558)
.+..||..|++|+|++|+|||++. ++.+.+|||+.+..
T Consensus 150 ~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 150 MVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred HHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence 999999999999999999999975 46899999998853
No 447
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.88 E-value=3.7e-09 Score=110.73 Aligned_cols=145 Identities=17% Similarity=0.185 Sum_probs=92.3
Q ss_pred hHhhhc---ccCcceeeeeeccEEEEEEEcCCCcEEEEEEecCC--ChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHH
Q 008643 98 LEAVFS---KISSQTIAAASLGQVYRATLRETGEDVAIKVQRPG--IEPIIYRDLFLFRTLASFLNGISIQKLGCNAELI 172 (558)
Q Consensus 98 ~~~~f~---~~~~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~--~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~i 172 (558)
+.+.|. +.-.+.+|=|-|++||.|.+..+.+-||+||++.. ..+....++.+|+.++.-=. ...
T Consensus 71 IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp------~~~----- 139 (590)
T KOG1290|consen 71 IGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDP------NDP----- 139 (590)
T ss_pred ccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCC------CCC-----
Confidence 455554 22257899999999999999989999999999853 23344455555555431000 000
Q ss_pred HHHHHHhhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHH-hcCCCCH--HHHHH
Q 008643 173 VDEFGEKLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAI-KGAGIDV--GGFLT 249 (558)
Q Consensus 173 v~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~-~~~~~~~--~~~~~ 249 (558)
-...++++...|.+... -....+||.|++ |-.|-.++.. .-.|++. .+-+.
T Consensus 140 ----------------~~~~VV~LlD~FkhsGp---------NG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~ 193 (590)
T KOG1290|consen 140 ----------------GKKCVVQLLDHFKHSGP---------NGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEIC 193 (590)
T ss_pred ----------------CCceeeeeeccceecCC---------CCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHH
Confidence 01233444444443210 012238999998 5555444322 2235444 45688
Q ss_pred HHHHHHHHHHH-HCCceecCCCCCCEEEecC
Q 008643 250 VGVSAALRQLL-EFGLFHGDPHPGNIFAMRD 279 (558)
Q Consensus 250 ~~v~~~L~~Lh-~~Gi~H~DlhPgNIlv~~d 279 (558)
+||+.||.||| +.||+|-|+||+|||+..+
T Consensus 194 ~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~ 224 (590)
T KOG1290|consen 194 RQVLTGLDYLHRECGIIHTDLKPENVLLCST 224 (590)
T ss_pred HHHHHHHHHHHHhcCccccCCCcceeeeecc
Confidence 99999999999 5699999999999999643
No 448
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.74 E-value=3.6e-08 Score=95.87 Aligned_cols=105 Identities=20% Similarity=0.221 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHHhcCCCCCeeeceeeecC------CCceEEEEeeeCCC-CCCCHHHHh-cCCCCHHHHHHHHHHHHHH
Q 008643 186 YTLEARNMEDFLENFKDDPTVKIPRVYKRL------SGSRVLVMEWIDGI-RCTDPQAIK-GAGIDVGGFLTVGVSAALR 257 (558)
Q Consensus 186 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~------~~~~vLvmE~i~G~-~L~d~~~~~-~~~~~~~~~~~~~v~~~L~ 257 (558)
..+|..|+.++.+. .|.+|.++.-. ..+.+|+||+++|. +|.+..... .........+..++...+.
T Consensus 58 a~~E~~~~~~L~~~-----Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~ 132 (206)
T PF06293_consen 58 AKREWRNLQRLREA-----GIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIA 132 (206)
T ss_pred HHHHHHHHHHHHHc-----CCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHH
Confidence 45567888888653 56777775421 13458999999984 566543321 1223344567788999999
Q ss_pred HHHHCCceecCCCCCCEEEecCC---CeEEeecCcccccCh
Q 008643 258 QLLEFGLFHGDPHPGNIFAMRDG---RIAYVDFGNVAELSQ 295 (558)
Q Consensus 258 ~Lh~~Gi~H~DlhPgNIlv~~dg---~l~liDFGl~~~l~~ 295 (558)
.||+.||+|+|++|+|||++.++ ++.++||+-+..-..
T Consensus 133 ~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~~ 173 (206)
T PF06293_consen 133 KLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRPS 173 (206)
T ss_pred HHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCCC
Confidence 99999999999999999999887 899999998876553
No 449
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.64 E-value=2.3e-07 Score=91.61 Aligned_cols=32 Identities=25% Similarity=0.444 Sum_probs=27.6
Q ss_pred CCceecCCCCCCEEEecCCCeEEeecCcccccC
Q 008643 262 FGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELS 294 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~ 294 (558)
..++|+|+||+||+++.+| +.++||+.++.-+
T Consensus 153 ~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~~Gd 184 (226)
T TIGR02172 153 STCLHGDFQIGNLITSGKG-TYWIDLGDFGYGN 184 (226)
T ss_pred CceEecCCCCCcEEEcCCC-cEEEechhcCcCC
Confidence 3578999999999999888 9999999887544
No 450
>PRK10593 hypothetical protein; Provisional
Probab=98.59 E-value=6e-07 Score=92.36 Aligned_cols=93 Identities=19% Similarity=0.278 Sum_probs=63.8
Q ss_pred HHHHHHHHHhCCChHhhhcccCcceeeeeeccEEEEEEEcCCCcEEEEEEecCC-ChhhHHHHHHHHHHHHHHhhhhhhh
Q 008643 85 VAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPG-IEPIIYRDLFLFRTLASFLNGISIQ 163 (558)
Q Consensus 85 ~~~~~ie~elg~~~~~~f~~~~~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~-~~~~i~~Dl~ilr~~~~~~~~~~~~ 163 (558)
.+.+.+++.+|.++.+ .++||.|.+++||+... .+| .+.+|+.+.. -...
T Consensus 3 ~~~~~~~~~~~~~~~~------~~~i~~G~~~~vy~~~~-~~~-~~~~k~~~~~~~~~~--------------------- 53 (297)
T PRK10593 3 QLRAELSHLLGEKLSR------VECISEQPYAALWALYD-SQG-NPMPLMARSFSTPGV--------------------- 53 (297)
T ss_pred HHHHHHHHHhchhhhe------eeecCCccceeEEEEEc-CCC-CEEEEEecccccchH---------------------
Confidence 4556677777764443 37999999999999877 344 5788986542 1111
Q ss_pred ccCCChHHHHHHHHHhhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecC-----CCceEEEEeeeCCCCCC
Q 008643 164 KLGCNAELIVDEFGEKLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRL-----SGSRVLVMEWIDGIRCT 232 (558)
Q Consensus 164 ~~~~~~~~iv~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-----~~~~vLvmE~i~G~~L~ 232 (558)
+..|+.++..+.+ ...++||+|+... .+..+|+|||++|.++.
T Consensus 54 ----------------------~~~Ea~~L~~L~~----~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G~~~~ 101 (297)
T PRK10593 54 ----------------------AQQEAWKLSMLAR----SGTVRMPTVYGVMTHEQSPGPDVLLLERLRGVSVE 101 (297)
T ss_pred ----------------------HHHHHHHHHHHcc----CCCCCcCcEEEEeccCCcCCCeEEEEeccCCEecC
Confidence 3456666666643 2358999999632 36689999999998763
No 451
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.59 E-value=1.4e-07 Score=91.93 Aligned_cols=34 Identities=44% Similarity=0.667 Sum_probs=24.3
Q ss_pred CCceecCCCCCCEEEe-cCCCeEEeecCcccccCh
Q 008643 262 FGLFHGDPHPGNIFAM-RDGRIAYVDFGNVAELSQ 295 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~-~dg~l~liDFGl~~~l~~ 295 (558)
.+++|+|+||+||+++ .+|++.++||+.++.-++
T Consensus 166 ~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~~~~ 200 (239)
T PF01636_consen 166 PVLIHGDLHPGNILVDPSDGRIGIIDFEDAGWGDP 200 (239)
T ss_dssp EEEE-SS-SGGGEEEESSTTEEEE--GTT-EEEET
T ss_pred cEEEEeccccccceeeeccceeEEEecccceECCH
Confidence 5799999999999999 677889999998876543
No 452
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.58 E-value=1.5e-06 Score=86.36 Aligned_cols=34 Identities=21% Similarity=0.327 Sum_probs=28.9
Q ss_pred CCceecCCCCCCEEEecCCCeEEeecCcccccCh
Q 008643 262 FGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQ 295 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~ 295 (558)
..++|+|+||+||+++.++.+.|+||+.++.-++
T Consensus 163 ~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~gdp 196 (244)
T cd05150 163 LVVTHGDACLPNIIVDPGKFSGFIDLGRLGVADR 196 (244)
T ss_pred eEEECCCCCCccEEEeCCcEEEEEEccccccccH
Confidence 3589999999999999877788999998875443
No 453
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=98.58 E-value=2.3e-06 Score=88.12 Aligned_cols=228 Identities=19% Similarity=0.265 Sum_probs=137.2
Q ss_pred cccCcceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHh
Q 008643 103 SKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLE 182 (558)
Q Consensus 103 ~~~~~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~ 182 (558)
.+++ -+|..|--+.||.|+- .+|..+|||+.+..+.---.+|-++--.. ++....-..++..+|.-|+
T Consensus 146 ~~in-GCiSTGKEANVYHat~-~dG~~~AIKIYKTSILvFKDRdRYV~GEf-----RFRhgyck~NPRKMVk~WA----- 213 (520)
T KOG2270|consen 146 VEIN-GCISTGKEANVYHATE-EDGSEFAIKIYKTSILVFKDRDRYVSGEF-----RFRHGYCKHNPRKMVKTWA----- 213 (520)
T ss_pred eecc-cccccCccceeEeeec-CCCceEEEEEEeeeEEEEechhhhcccee-----eeecccccCCcHHHHHHHH-----
Confidence 3444 4788999999999999 79999999998765432222222111000 0000011236777777764
Q ss_pred hhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCC--HHHHHHHHHHHHHHHH-
Q 008643 183 ELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGID--VGGFLTVGVSAALRQL- 259 (558)
Q Consensus 183 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~--~~~~~~~~v~~~L~~L- 259 (558)
..|.+|+.|++.. .|++|.++. -..+||||+|+.+-.. -...++...+. ...-+-.++...++-|
T Consensus 214 ----EKE~RNLkRl~~a-----GIP~PePIl--Lk~hVLVM~FlGrdgw-~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY 281 (520)
T KOG2270|consen 214 ----EKEMRNLKRLNNA-----GIPCPEPIL--LKNHVLVMEFLGRDGW-AAPKLKDASLSTSKARELYQQCVRIMRRLY 281 (520)
T ss_pred ----HHHHHHHHHHHhc-----CCCCCCcee--eecceEeeeeccCCCC-cCcccccccCChHHHHHHHHHHHHHHHHHH
Confidence 3467999998653 466776654 5667999999963221 11223333333 2233344455555554
Q ss_pred HHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHH
Q 008643 260 LEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPAL 339 (558)
Q Consensus 260 h~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l 339 (558)
+..+++|+||.-=|+|+ .+|.+.+||-+.+-..+......+. ..|...+..-|-++|... .+ +
T Consensus 282 ~~c~LVHADLSEfN~Ly-hdG~lyiIDVSQSVE~DHP~aldFL-------RmDc~NVn~FF~r~gv~v-----~t----~ 344 (520)
T KOG2270|consen 282 QKCRLVHADLSEFNLLY-HDGKLYIIDVSQSVEHDHPHALDFL-------RMDCNNVNDFFRRLGVAV-----MT----V 344 (520)
T ss_pred HHhceeccchhhhhheE-ECCEEEEEEccccccCCChhHHHHH-------HHHHHHHHHHHHHcCCee-----ec----H
Confidence 57899999999999998 6899999999988877765443322 345556666666666432 11 1
Q ss_pred HHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcC
Q 008643 340 EAIWQNSSGKGLADFNFRSVTGQFNKLVYNYR 371 (558)
Q Consensus 340 ~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 371 (558)
.++|.-.........+....+..+..++...+
T Consensus 345 r~LFefI~d~~i~~~nmd~~l~~l~~~~~~r~ 376 (520)
T KOG2270|consen 345 RELFEFITDPTITLENMDAYLEELKAIIISRD 376 (520)
T ss_pred HHHHHHhhccccchhhHHHHHHHHHHHHhcCc
Confidence 22333333445555666666666666555444
No 454
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=98.51 E-value=3.4e-08 Score=104.94 Aligned_cols=124 Identities=19% Similarity=0.159 Sum_probs=96.2
Q ss_pred ceEEEEeeeCCCCCCCHHHHhcCCCC----HHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCccccc
Q 008643 218 SRVLVMEWIDGIRCTDPQAIKGAGID----VGGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAEL 293 (558)
Q Consensus 218 ~~vLvmE~i~G~~L~d~~~~~~~~~~----~~~~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l 293 (558)
..++.|+||+-..|.++..-+..+.. ....+..|+..+++| .|.+|+|+||.||+...+++++|.|||++...
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~ 406 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQ 406 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheeec
Confidence 46899999999999887643433322 334466778888888 99999999999999999999999999999887
Q ss_pred ChhhHHHHHHHHHH-HHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHh
Q 008643 294 SQQNKQILIDAVVH-AVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 294 ~~~~~~~l~~~~~~-~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~ 345 (558)
...... .....-| --.++.-||.|+.+...-++..+|+|++|..+++++..
T Consensus 407 ~~~~~~-~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~ 458 (516)
T KOG1033|consen 407 DKDETV-APAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQ 458 (516)
T ss_pred ccCCcc-cchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHH
Confidence 654410 0001111 12478889999999999999999999999999999974
No 455
>PRK05231 homoserine kinase; Provisional
Probab=98.45 E-value=3.8e-06 Score=86.98 Aligned_cols=33 Identities=21% Similarity=0.282 Sum_probs=27.4
Q ss_pred HCCceecCCCCCCEEEecCCCeEEeecCccccc
Q 008643 261 EFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAEL 293 (558)
Q Consensus 261 ~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l 293 (558)
..|++|+|+||+||+++.+....++||+.++.-
T Consensus 186 p~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~~ 218 (319)
T PRK05231 186 PRGVIHADLFRDNVLFEGDRLSGFIDFYFACND 218 (319)
T ss_pred CcccCCCCCCCCcEEEECCceEEEEecccccCC
Confidence 349999999999999986555589999988643
No 456
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.45 E-value=2.2e-06 Score=84.97 Aligned_cols=34 Identities=32% Similarity=0.465 Sum_probs=27.4
Q ss_pred CCceecCCCCCCEEEecCCCeEEeecCcccccCh
Q 008643 262 FGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQ 295 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~ 295 (558)
.+++|+|+||+|++++.++...++||+.+..-++
T Consensus 164 ~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~gDp 197 (235)
T cd05155 164 PVWFHGDLAPGNLLVQDGRLSAVIDFGCLGVGDP 197 (235)
T ss_pred ceEEeCCCCCCcEEEECCCEEEEEeCcccCcCCh
Confidence 4699999999999997655457999998865443
No 457
>PRK09902 hypothetical protein; Provisional
Probab=98.40 E-value=4e-06 Score=81.20 Aligned_cols=149 Identities=14% Similarity=0.144 Sum_probs=97.0
Q ss_pred ccCcceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhh
Q 008643 104 KISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEE 183 (558)
Q Consensus 104 ~~~~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~E 183 (558)
.+++---+.|+.+.|++-.+ .|..+-+|-|...+...+. . .. .+
T Consensus 20 wve~pN~~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s~r-------------~-------P~--------------g~ 63 (216)
T PRK09902 20 WVEEPNYRRNGMSGVQCVER--NGKKLYVKRMTHHLFHSVR-------------Y-------PF--------------GR 63 (216)
T ss_pred eecCCCcCCCCcceEEEEEe--CCcEEEEEeccCccccccc-------------C-------CC--------------Cc
Confidence 34433467799999999877 6778999987533222100 0 00 11
Q ss_pred hcHHHHHHHHHHHHHhcCCCCCeeeceeeecC------CCceEEEEeeeCC-CCCCCHHHHhcC---CCCHHHHHHHHHH
Q 008643 184 LDYTLEARNMEDFLENFKDDPTVKIPRVYKRL------SGSRVLVMEWIDG-IRCTDPQAIKGA---GIDVGGFLTVGVS 253 (558)
Q Consensus 184 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~------~~~~vLvmE~i~G-~~L~d~~~~~~~---~~~~~~~~~~~v~ 253 (558)
--|.+|-.++.++.+. .+.||.+.... ..+.+||+|-++| .+|.++...... +......+...+.
T Consensus 64 ptf~rE~~~L~~L~~~-----GvPVP~pvf~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va 138 (216)
T PRK09902 64 PTIVREVAVIKELERA-----GVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVA 138 (216)
T ss_pred hHHHHHHHHHHHHHHc-----CCCCCccceeeeeccCCceEEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHH
Confidence 2244555677777654 45566665211 2346899999876 345444221111 1222346777889
Q ss_pred HHHHHHHHCCceecCCCCCCEEEecCCC--eEEeecCccccc
Q 008643 254 AALRQLLEFGLFHGDPHPGNIFAMRDGR--IAYVDFGNVAEL 293 (558)
Q Consensus 254 ~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~--l~liDFGl~~~l 293 (558)
..+..||..|+.|+|+-+-||+++.+|. +++|||--++..
T Consensus 139 ~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~~ 180 (216)
T PRK09902 139 LAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRR 180 (216)
T ss_pred HHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccchh
Confidence 9999999999999999999999987777 999999766543
No 458
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=98.36 E-value=5.1e-06 Score=85.02 Aligned_cols=31 Identities=23% Similarity=0.263 Sum_probs=27.8
Q ss_pred CCceecCCCCCCEEEecCCCeEEeecCcccc
Q 008643 262 FGLFHGDPHPGNIFAMRDGRIAYVDFGNVAE 292 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~ 292 (558)
.+++|+|+||+|++++.++.+.++||+.+..
T Consensus 175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~ 205 (296)
T cd05153 175 RGVIHADLFRDNVLFDGDELSGVIDFYFACT 205 (296)
T ss_pred CcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence 5899999999999999877789999998864
No 459
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=98.25 E-value=3.8e-06 Score=85.27 Aligned_cols=161 Identities=22% Similarity=0.331 Sum_probs=105.4
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYT 187 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~ 187 (558)
+.||-|--+-||.+-. ..|++.++|+.|-|-.. .+-++.-...+. .+....|+ -+.-|.-.
T Consensus 98 nqIGVGKESDIY~v~d-~~G~~~~lK~HRLGRtS-----FR~Vk~kRDY~r------~r~~~sWl-------yLSRlaa~ 158 (465)
T KOG2268|consen 98 NQIGVGKESDIYVVAD-EEGNPLILKLHRLGRTS-----FRNVKNKRDYLR------KRKSGSWL-------YLSRLAAT 158 (465)
T ss_pred cccccccccceEEEec-CCCCchhHHHHhhhhhh-----HHHhhhhhhhHh------cCCccchh-------hhHHHHHH
Confidence 5789999999999999 78999999987755211 111111000000 00000010 01111122
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHCCceec
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGLFHG 267 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi~H~ 267 (558)
.|-..+..+++ ..++||+++. .++++.|||+++|.+|..+... .++..++. .+...+.-|-.+|++|+
T Consensus 159 kEfafmkaL~e-----~gfpVPkpiD--~~RH~Vvmelv~g~Pl~~v~~v----~d~~~ly~-~lm~~Iv~la~~GlIHg 226 (465)
T KOG2268|consen 159 KEFAFMKALYE-----RGFPVPKPID--HNRHCVVMELVDGYPLRQVRHV----EDPPTLYD-DLMGLIVRLANHGLIHG 226 (465)
T ss_pred HHHHHHHHHHH-----cCCCCCCccc--ccceeeHHHhhcccceeeeeec----CChHHHHH-HHHHHHHHHHHcCceec
Confidence 33344444432 3578899887 7889999999999999875332 23444443 35566677889999999
Q ss_pred CCCCCCEEEecCCCeEEeecCcccccChhhHH
Q 008643 268 DPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQ 299 (558)
Q Consensus 268 DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~ 299 (558)
|-.-=||++..++++++|||-.|-..+....+
T Consensus 227 DFNEFNimv~dd~~i~vIDFPQmvS~sh~nA~ 258 (465)
T KOG2268|consen 227 DFNEFNIMVKDDDKIVVIDFPQMVSTSHPNAE 258 (465)
T ss_pred ccchheeEEecCCCEEEeechHhhccCCCccc
Confidence 99999999999999999999988777765544
No 460
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.19 E-value=1.6e-05 Score=74.33 Aligned_cols=126 Identities=25% Similarity=0.313 Sum_probs=82.2
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCCh-hhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhc
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIE-PIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELD 185 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~-~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld 185 (558)
.+.+|+|..|.||.+.+ .|.+||+|++|++.. ..+.
T Consensus 27 ~~~L~KG~~s~Vyl~~~--~~~~~a~Kvrr~ds~r~~l~----------------------------------------- 63 (201)
T COG2112 27 EKELAKGTTSVVYLGEW--RGGEVALKVRRRDSPRRNLE----------------------------------------- 63 (201)
T ss_pred hhhhhcccccEEEEeec--cCceEEEEEecCCcchhhHH-----------------------------------------
Confidence 35799999999999999 577999999997643 2222
Q ss_pred HHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHCCce
Q 008643 186 YTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGLF 265 (558)
Q Consensus 186 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi~ 265 (558)
.||+.++..... -..|++|. -+..++.|||++|.+|.+.... .+...+ ..++..-.-|-..||-
T Consensus 64 --kEakiLeil~g~------~~~p~vy~--yg~~~i~me~i~G~~L~~~~~~----~~rk~l--~~vlE~a~~LD~~GI~ 127 (201)
T COG2112 64 --KEAKILEILAGE------GVTPEVYF--YGEDFIRMEYIDGRPLGKLEIG----GDRKHL--LRVLEKAYKLDRLGIE 127 (201)
T ss_pred --HHHHHHHHhhhc------CCCceEEE--echhhhhhhhhcCcchhhhhhc----ccHHHH--HHHHHHHHHHHHhccc
Confidence 234433333222 23566665 3455677999999998765321 122221 2233333335577999
Q ss_pred ecCCC-CCCEEEecCCCeEEeecCccc
Q 008643 266 HGDPH-PGNIFAMRDGRIAYVDFGNVA 291 (558)
Q Consensus 266 H~Dlh-PgNIlv~~dg~l~liDFGl~~ 291 (558)
|..++ |...++..++++.||||--++
T Consensus 128 H~El~~~~k~vlv~~~~~~iIDFd~At 154 (201)
T COG2112 128 HGELSRPWKNVLVNDRDVYIIDFDSAT 154 (201)
T ss_pred hhhhcCCceeEEecCCcEEEEEccchh
Confidence 99997 444455567799999998876
No 461
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=98.14 E-value=3.3e-08 Score=110.58 Aligned_cols=126 Identities=17% Similarity=0.167 Sum_probs=100.2
Q ss_pred CCceEEEEeeeCCCCCCCHH-HHh--cCCCCHHHHHHHHHHHHHHHHH-HCCceecCCCCCCEEEecCC-CeEEeecCcc
Q 008643 216 SGSRVLVMEWIDGIRCTDPQ-AIK--GAGIDVGGFLTVGVSAALRQLL-EFGLFHGDPHPGNIFAMRDG-RIAYVDFGNV 290 (558)
Q Consensus 216 ~~~~vLvmE~i~G~~L~d~~-~~~--~~~~~~~~~~~~~v~~~L~~Lh-~~Gi~H~DlhPgNIlv~~dg-~l~liDFGl~ 290 (558)
....++.++|.+|+.+.+.. ... ....+....+..++..++.|+| +.|+.|+|++|.|.+++..| .+++.|||++
T Consensus 93 ~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~A 172 (601)
T KOG0590|consen 93 PRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLA 172 (601)
T ss_pred CcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhh
Confidence 44558999999999988765 222 2234556789999999999999 99999999999999999999 9999999999
Q ss_pred cccCh-hhHHHHHHHHHHHHhc-CHHHHHHHHHHc-CCCCCCCCcccHHHHHHHHHHh
Q 008643 291 AELSQ-QNKQILIDAVVHAVNE-DYAEMANDFTRL-GFLAKGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 291 ~~l~~-~~~~~l~~~~~~~~~~-d~~~~a~~~~~~-g~~~~~~Di~~l~~~l~~l~~~ 345 (558)
..+.. ..... .....+| ++.|+++++... ++..+.+|+|+.|..+..++.+
T Consensus 173 t~~~~~~g~~~----~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g 226 (601)
T KOG0590|consen 173 TAYRNKNGAER----SLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTG 226 (601)
T ss_pred ccccccCCcce----eeecccCCCCCCCCcccccchhhcCCCcccccccccccccccC
Confidence 98876 33332 1233456 899999888765 6788899999999888877654
No 462
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=98.12 E-value=3.5e-05 Score=79.48 Aligned_cols=31 Identities=26% Similarity=0.366 Sum_probs=28.2
Q ss_pred CCceecCCCCCCEEEecCCCeEEeecCcccc
Q 008643 262 FGLFHGDPHPGNIFAMRDGRIAYVDFGNVAE 292 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~ 292 (558)
.|++|+|+|++|++++.++...++||+.+..
T Consensus 187 ~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~ 217 (307)
T TIGR00938 187 RGVIHADLFPDNVLFDGDSVKGVIDFYFACT 217 (307)
T ss_pred CccCCCCCCcCcEEEECCceEEEeecccccC
Confidence 6899999999999999888779999998864
No 463
>PLN02876 acyl-CoA dehydrogenase
Probab=98.05 E-value=5.4e-05 Score=88.52 Aligned_cols=107 Identities=13% Similarity=0.237 Sum_probs=62.5
Q ss_pred CChHHHHHHHHHHhCCChHhhhcccCcceeeeeeccEEEEEEEcCCC---cEEEEEEecCCChhhHHHHHHHHHHHHHHh
Q 008643 81 FPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETG---EDVAIKVQRPGIEPIIYRDLFLFRTLASFL 157 (558)
Q Consensus 81 ~~~~~~~~~ie~elg~~~~~~f~~~~~~pIg~Gs~GqVy~a~~~~~G---~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~ 157 (558)
++.+.....+.+.++. +....+.+.-++++.|....+|+.... +| ..+++|...++....-
T Consensus 18 ~d~~~l~~~l~~~~~~-~~~~~~~~~v~~l~gG~sn~ty~l~~~-~~~~~~~~VLR~~p~~~~~~~-------------- 81 (822)
T PLN02876 18 FDEDALLRYAAANVAG-FPVPPSTFKVSQFGHGQSNPTFLLEVG-NGGSVKRYVLRKKPPGKLLQS-------------- 81 (822)
T ss_pred CCHHHHHHHHHHhCCC-cCCCccceeEEEeCCCCcCceEEEEEC-CCCcceeEEEEeCCCCccCcc--------------
Confidence 5555555566554421 111111134578999999999998873 33 4788887665421100
Q ss_pred hhhhhhccCCChHHHHHHHHHhhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCC-----CceEEEEeeeCCCCCC
Q 008643 158 NGISIQKLGCNAELIVDEFGEKLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLS-----GSRVLVMEWIDGIRCT 232 (558)
Q Consensus 158 ~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~-----~~~vLvmE~i~G~~L~ 232 (558)
.-++.+|.+.+..+. .+..++||+++.... +..++||||++|..+.
T Consensus 82 -------------------------~~~~~rE~~~l~~L~----~~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~~~~ 132 (822)
T PLN02876 82 -------------------------AHAVEREYQVLRALG----EHTDVPVPKVYCLCTDASVIGTAFYIMEYLEGRIFV 132 (822)
T ss_pred -------------------------HHHHHHHHHHHHHHh----hcCCCCCCcEEEEecCCCcCCCceEEEEecCCcccC
Confidence 001233444444332 235688999987533 4578999999997654
No 464
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=98.04 E-value=5.3e-05 Score=74.71 Aligned_cols=33 Identities=18% Similarity=0.303 Sum_probs=28.4
Q ss_pred CCceecCCCCCCEEEec-CCCeEEeecCcccccC
Q 008643 262 FGLFHGDPHPGNIFAMR-DGRIAYVDFGNVAELS 294 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~-dg~l~liDFGl~~~l~ 294 (558)
.+++|+|++|+||+++. ++.+.++||-.++.-.
T Consensus 170 ~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~~~ 203 (235)
T cd05157 170 IVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGYNY 203 (235)
T ss_pred EEEEcCCCCcCcEEEeCCCCCEEEEEcccCCcCc
Confidence 36999999999999998 5889999998876443
No 465
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=98.04 E-value=0.00012 Score=78.00 Aligned_cols=111 Identities=18% Similarity=0.197 Sum_probs=64.5
Q ss_pred CCChHHHHHHHHHHhCCChHhhhcccCcceeeeeeccEEEEEEEcCCC-cEEEEEEecCCChhhHHHHHHHHHHHHHHhh
Q 008643 80 SFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETG-EDVAIKVQRPGIEPIIYRDLFLFRTLASFLN 158 (558)
Q Consensus 80 p~~~~~~~~~ie~elg~~~~~~f~~~~~~pIg~Gs~GqVy~a~~~~~G-~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~ 158 (558)
++..+.+...+.+..|.-- .-+..+.++||.|.+..||+.+. .+| +.|+||...|.+...-
T Consensus 6 ~l~~~~v~~yl~~~~~~~~--~~~~~~~~elggGn~N~VyrV~~-~~g~~svIVKqa~p~~r~~g--------------- 67 (401)
T PRK09550 6 TLTEEDAVEYAALKLGLFD--PKALLTAREIGDGNLNLVFRVSD-TEGGKSVIVKQALPYVRVVG--------------- 67 (401)
T ss_pred eCCHhHHHHHHHHhcCCCC--CcccceeeEcCCCceEEEEEEEe-CCCCeEEEEEecCccccccc---------------
Confidence 3444455555544433210 11234457999999999999999 455 5999998765432100
Q ss_pred hhhhhccCCChHHHHHHHHHhhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCC
Q 008643 159 GISIQKLGCNAELIVDEFGEKLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIR 230 (558)
Q Consensus 159 ~~~~~~~~~~~~~iv~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~ 230 (558)
..+..+.. ....|+..+..+... ....||++|.......+++|||+++..
T Consensus 68 ----~~wpl~~e--------------R~~~Eae~L~~l~~~----~p~~VPkV~~~D~~~~~lVME~L~~~~ 117 (401)
T PRK09550 68 ----ESWPLTLD--------------RARIEAEALKIQAKY----VPDLVPKVYHYDEELAVTVMEDLSDHK 117 (401)
T ss_pred ----ccccccHH--------------HHHHHHHHHHHHHhh----CCCCCCeEEEECCCCCEEEEecCCCcc
Confidence 00000000 023345555444432 234699999877777899999998743
No 466
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=98.02 E-value=2.1e-05 Score=85.09 Aligned_cols=144 Identities=17% Similarity=0.177 Sum_probs=104.0
Q ss_pred HHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHH--HHHHHHHHHHHHHHHHCCc-ee
Q 008643 190 ARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVG--GFLTVGVSAALRQLLEFGL-FH 266 (558)
Q Consensus 190 a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~--~~~~~~v~~~L~~Lh~~Gi-~H 266 (558)
|.|+.+|.+..-+.+.+ +.+.+||.-++|.|.........|.. -.+.+.+..|+.|+|.--+ +|
T Consensus 6 h~n~~~f~g~~~~~~~~-------------~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~h 72 (484)
T KOG1023|consen 6 HDNLNKFIGASVDGPEM-------------IVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYH 72 (484)
T ss_pred hhhhhhheeeEecCCce-------------EEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceee
Confidence 78888998877666554 88999999999999876655555432 2345678899999997654 99
Q ss_pred cCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCC-------CCCCCCcccHHHHH
Q 008643 267 GDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGF-------LAKGTDVSPIIPAL 339 (558)
Q Consensus 267 ~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~-------~~~~~Di~~l~~~l 339 (558)
+-+++.|.+++..-.+|+.|||+.....+.... ...+....+.-+.+|++.+... .+...|+|+++..+
T Consensus 73 g~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~----~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~ 148 (484)
T KOG1023|consen 73 GALKSSNCLVDSRWVLKLTDFGLNSLLEETAEP----EAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIM 148 (484)
T ss_pred eeeccccceeeeeEEEEechhhhcccccccccc----cccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHH
Confidence 999999999999999999999998877430000 0011112344556677776531 35568999999999
Q ss_pred HHHHHhhcCCC
Q 008643 340 EAIWQNSSGKG 350 (558)
Q Consensus 340 ~~l~~~~~~~~ 350 (558)
++++......+
T Consensus 149 ~ei~~r~~~~~ 159 (484)
T KOG1023|consen 149 YEILFRSGPFD 159 (484)
T ss_pred HHHHhccCccc
Confidence 99998654333
No 467
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=98.01 E-value=5.1e-05 Score=76.07 Aligned_cols=32 Identities=19% Similarity=0.318 Sum_probs=27.8
Q ss_pred CceecCCCCCCEEEecCCCeEEeecCcccccCh
Q 008643 263 GLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQ 295 (558)
Q Consensus 263 Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~ 295 (558)
.++|+|++|+||+++.+| +.++||..++.-++
T Consensus 147 ~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~~gdp 178 (256)
T TIGR02721 147 APLHMDVHAYNLVVTPQG-LKLIDWEYASDGDI 178 (256)
T ss_pred eeecCCCCcCcEEEeCCC-CEEEeccccCcCCH
Confidence 689999999999999877 89999998875544
No 468
>PLN02756 S-methyl-5-thioribose kinase
Probab=97.96 E-value=0.00016 Score=76.95 Aligned_cols=85 Identities=18% Similarity=0.190 Sum_probs=52.6
Q ss_pred cCcceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhh
Q 008643 105 ISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEEL 184 (558)
Q Consensus 105 ~~~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~El 184 (558)
...++||-|....||+... .+..|+||...|.+...-. .+..+.. ++
T Consensus 35 l~~~eiggGn~N~VyrV~~--~~~svVVKqa~p~~r~vga-------------------~wpl~~~-----------R~- 81 (418)
T PLN02756 35 LKIKEVGDGNLNFVYIVVS--SSGSFVIKQALPYIRCIGE-------------------SWPMTKE-----------RA- 81 (418)
T ss_pred ceEEEcCCCceeeEEEEEc--CCccEEEEeCCccccCCCc-------------------cccCCcc-----------HH-
Confidence 4457899999999999887 4567999987765431000 0000000 00
Q ss_pred cHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCC
Q 008643 185 DYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDG 228 (558)
Q Consensus 185 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G 228 (558)
..|+..+....+ ...+.||++|.-.....+++|||+++
T Consensus 82 --~~Ea~aL~~~~~----~~p~~VPkVy~~ded~~vlvME~L~~ 119 (418)
T PLN02756 82 --YFEATALREHGR----LCPDHVPEVYHFDRTMALIGMRYLEP 119 (418)
T ss_pred --HHHHHHHHHhhh----cCCCCCCeEEEECCCCCEEEEeecCC
Confidence 112232222222 23468999998877888999999988
No 469
>PRK06148 hypothetical protein; Provisional
Probab=97.90 E-value=0.00045 Score=82.42 Aligned_cols=56 Identities=20% Similarity=0.392 Sum_probs=44.2
Q ss_pred hhcCCCCCChHHHHHHHHHHhCCChHhhhcccCcceeeeeeccEEEEEEEcCCCcEEEEEEecCC
Q 008643 74 LQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPG 138 (558)
Q Consensus 74 Lqd~~pp~~~~~~~~~ie~elg~~~~~~f~~~~~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~ 138 (558)
+....|.++.+.+.+.+++.+|..- + .++|++ ..-++|+... .+|..+++|+.+|.
T Consensus 4 ~~~~~p~~s~~~~~~~~~~~ygl~~-----~--~~~L~s-~~d~nf~v~~-~~g~~yVLKi~~~~ 59 (1013)
T PRK06148 4 LSHPAPEFTTKDAEALLAQHFGISA-----T--ATPLDG-ERDLNFRLTT-DDGADYILKIVNPS 59 (1013)
T ss_pred CCCCCCCCCHHHHHHHHHHHcCCce-----E--EeecCC-cCCceEEEEe-CCCCeEEEEEcCCc
Confidence 4456788999999999999998742 1 257754 5688999987 68889999999886
No 470
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=97.81 E-value=0.00017 Score=73.77 Aligned_cols=94 Identities=19% Similarity=0.352 Sum_probs=55.9
Q ss_pred hHHHHHHHHHHhCCChHhhhcccCcceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhh
Q 008643 83 NQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISI 162 (558)
Q Consensus 83 ~~~~~~~ie~elg~~~~~~f~~~~~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~ 162 (558)
+..+.+.|++.+|.+..- -+.++|+.|.+.++|+.. .+++.+.||+........
T Consensus 2 w~~i~~~~~~~~~~~~~i----~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~~~~~~~-------------------- 55 (288)
T PF03881_consen 2 WQAIEQQISEQLGADFKI----TSIEPVSGGDINEAYRLD--TDGGSYFVKVNSESGRDM-------------------- 55 (288)
T ss_dssp HHHHHHHHHHHHTS---------EEEEE--SSSSEEEEEE--TTS-EEEEEEEEGGGCCH--------------------
T ss_pred hHHHHHHHHHHhCCCCce----eeeEecCCCChhheEEEE--CCCccEEEEecChhhHHH--------------------
Confidence 356778888989876211 113799999999999987 478899999986332221
Q ss_pred hccCCChHHHHHHHHHhhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeee--cCCCceEEEEeeeCCC
Q 008643 163 QKLGCNAELIVDEFGEKLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYK--RLSGSRVLVMEWIDGI 229 (558)
Q Consensus 163 ~~~~~~~~~iv~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~vLvmE~i~G~ 229 (558)
|..|+..+..+.+ ...+.||+++. .+.+..+|+|||++.+
T Consensus 56 -----------------------f~~Ea~gL~~L~~----~~~~~vP~vi~~G~~~~~~fLlle~l~~~ 97 (288)
T PF03881_consen 56 -----------------------FEGEAEGLKALAE----ANPIRVPKVIAWGEYDDDAFLLLEFLEMG 97 (288)
T ss_dssp -----------------------HHHHHHHHHHHCH----TTTSBS--EEEEEE-SSCCEEEEE-----
T ss_pred -----------------------HHHHHHHHHHHHh----cCCCCCCeEEEEEeecCCceEEEEeecCC
Confidence 3456666666643 24577888876 4456779999999987
No 471
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=97.73 E-value=8.4e-05 Score=81.77 Aligned_cols=175 Identities=18% Similarity=0.180 Sum_probs=110.5
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCCh---hhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhh
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGIE---PIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEEL 184 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~---~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~El 184 (558)
++.+-++.+....|..+.+|.+|.|.+..-.-. +.+.+-..-|+.
T Consensus 18 e~~~~~~~a~~~~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKt-------------------------------- 65 (690)
T KOG1243|consen 18 EETAFSSEALWPDGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKT-------------------------------- 65 (690)
T ss_pred ccccCCCcccccccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhh--------------------------------
Confidence 344555555555777778999999997643222 111111111111
Q ss_pred cHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHH-HCC
Q 008643 185 DYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLL-EFG 263 (558)
Q Consensus 185 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh-~~G 263 (558)
..|+|+.++.+.+...+.+ |||+|.+. +|..+ +++.+.........||.++|.+|| +.+
T Consensus 66 ---lRHP~Il~yL~t~e~~~~~-------------ylvTErV~--Pl~~~--lk~l~~~~v~~Gl~qIl~AL~FL~~d~~ 125 (690)
T KOG1243|consen 66 ---LRHPNILSYLDTTEEEGTL-------------YLVTERVR--PLETV--LKELGKEEVCLGLFQILAALSFLNDDCN 125 (690)
T ss_pred ---ccCchhhhhhhhhcccCce-------------EEEeeccc--cHHHH--HHHhHHHHHHHHHHHHHHHHHHHhccCC
Confidence 1288999988887776544 99999985 44432 334443334456678999999997 678
Q ss_pred ceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCC---CCCcccHHHHHH
Q 008643 264 LFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAK---GTDVSPIIPALE 340 (558)
Q Consensus 264 i~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~---~~Di~~l~~~l~ 340 (558)
++|+++.-+.|+++..|..+|.+|-.+...+...... -+.+....+.......+ ..|.|.+++.++
T Consensus 126 lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~-----------~~~~~~~s~~~P~~~~~s~~s~D~~~Lg~li~ 194 (690)
T KOG1243|consen 126 LVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPA-----------KSLYLIESFDDPEEIDPSEWSIDSWGLGCLIE 194 (690)
T ss_pred eeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCccc-----------ccchhhhcccChhhcCccccchhhhhHHHHHH
Confidence 9999999999999999999999999887665433100 00000000000000111 258888899999
Q ss_pred HHHHh
Q 008643 341 AIWQN 345 (558)
Q Consensus 341 ~l~~~ 345 (558)
+++.+
T Consensus 195 el~ng 199 (690)
T KOG1243|consen 195 ELFNG 199 (690)
T ss_pred HHhCc
Confidence 98876
No 472
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=97.72 E-value=0.00028 Score=71.88 Aligned_cols=33 Identities=33% Similarity=0.588 Sum_probs=28.0
Q ss_pred CceecCCCCCCEEEecCCCe-EEeecCcccccCh
Q 008643 263 GLFHGDPHPGNIFAMRDGRI-AYVDFGNVAELSQ 295 (558)
Q Consensus 263 Gi~H~DlhPgNIlv~~dg~l-~liDFGl~~~l~~ 295 (558)
.++|+|+||+||+++.+|++ .++||+.+..-++
T Consensus 186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iGDP 219 (276)
T cd05152 186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKVGDP 219 (276)
T ss_pred eeEeCCCCCCcEEEeCCCCEEEEECcHhcccCCH
Confidence 58999999999999876764 6999999876655
No 473
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=97.63 E-value=9.4e-06 Score=87.95 Aligned_cols=190 Identities=18% Similarity=0.140 Sum_probs=119.8
Q ss_pred cceeee--eeccEEEEEEE--cCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHh
Q 008643 107 SQTIAA--ASLGQVYRATL--RETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLE 182 (558)
Q Consensus 107 ~~pIg~--Gs~GqVy~a~~--~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~ 182 (558)
...+|. |++|+||.++. +.++..+|+|.++--...-... .+. .+
T Consensus 119 ~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~----~~k----------------------------~~ 166 (524)
T KOG0601|consen 119 SSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDS----KRK----------------------------LR 166 (524)
T ss_pred ccccccCCCCCceeecccCCcccCCcccccccccCCCCCcccc----ccc----------------------------cc
Confidence 467899 99999999999 8999999999864211100000 000 01
Q ss_pred hhcHH---HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHH--HHHHHHHH---
Q 008643 183 ELDYT---LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGG--FLTVGVSA--- 254 (558)
Q Consensus 183 Eld~~---~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~--~~~~~v~~--- 254 (558)
|.+.. ..|.|..+ -...|+.++..++-+|++. ..+..+........+... -.......
T Consensus 167 ~~~s~~~i~~~~~~v~-------------~~~~~e~~~~lfiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~ 232 (524)
T KOG0601|consen 167 EFLSHHKIDSHENPVR-------------DSPAWEGSGILFIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDV 232 (524)
T ss_pred hhhcccccCccccccc-------------cCcccccCCcceeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhccc
Confidence 11100 01222222 2233555777789999886 455544332222222222 23344555
Q ss_pred -HHHHHHHCCceecCCCCCCEEEecC-CCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCc
Q 008643 255 -ALRQLLEFGLFHGDPHPGNIFAMRD-GRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDV 332 (558)
Q Consensus 255 -~L~~Lh~~Gi~H~DlhPgNIlv~~d-g~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di 332 (558)
|+..+|..+++|-|++|.|++...+ ...++.|||.+..+.+..-....... --..++.-|++++..+ |..+...|+
T Consensus 233 ~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~-~r~~~~~~Y~~ke~~~-~l~~~~~di 310 (524)
T KOG0601|consen 233 TALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVS-KRPEGDCIYAAKELLN-GLATFASDI 310 (524)
T ss_pred ccccccCCCcccccccchhheecccccceeecCCcceeEEccCCccccceeee-ecCCCCceEeChhhhc-cccchHhhh
Confidence 9999999999999999999999999 78899999999999875422111100 0014677788888766 667778899
Q ss_pred ccHHHHHHHHHH
Q 008643 333 SPIIPALEAIWQ 344 (558)
Q Consensus 333 ~~l~~~l~~l~~ 344 (558)
++++..+.+...
T Consensus 311 ~sl~ev~l~~~l 322 (524)
T KOG0601|consen 311 FSLGEVILEAIL 322 (524)
T ss_pred cchhhhhHhhHh
Confidence 999877655443
No 474
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=97.60 E-value=0.0014 Score=68.35 Aligned_cols=29 Identities=31% Similarity=0.666 Sum_probs=26.2
Q ss_pred ceecCCCCCCEEEecCCC-eEEeecCcccc
Q 008643 264 LFHGDPHPGNIFAMRDGR-IAYVDFGNVAE 292 (558)
Q Consensus 264 i~H~DlhPgNIlv~~dg~-l~liDFGl~~~ 292 (558)
++|+|+||+||+++.+.. ..++|||-++.
T Consensus 199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa~~ 228 (331)
T COG2334 199 IIHGDLHPDNVLFDDDTDVSGFIDFDDAGY 228 (331)
T ss_pred eeecCCCccceeEcCCCCeeeEEEcccccc
Confidence 999999999999998875 89999998763
No 475
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=97.56 E-value=0.0013 Score=68.04 Aligned_cols=35 Identities=23% Similarity=0.234 Sum_probs=31.1
Q ss_pred CCceecCCCCCCEEEecCCCeEEeecCcccccChh
Q 008643 262 FGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQ 296 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~ 296 (558)
..++|+|.|++|+++++++-+.++||+++..-++.
T Consensus 198 ~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGDP~ 232 (321)
T COG3173 198 PVLVHGDYRPGNLIIDPGRPTGVLDWELATLGDPL 232 (321)
T ss_pred ceeeeCCcccCCEEEeCCCeeEEEeccccccCCcH
Confidence 36899999999999999999999999999866553
No 476
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.53 E-value=0.00076 Score=69.23 Aligned_cols=34 Identities=21% Similarity=0.367 Sum_probs=29.3
Q ss_pred CCceecCCCCCCEEEecC----CCeEEeecCcccccCh
Q 008643 262 FGLFHGDPHPGNIFAMRD----GRIAYVDFGNVAELSQ 295 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~d----g~l~liDFGl~~~l~~ 295 (558)
.++.|+|+||+||+++.+ +.++++||..++.-.+
T Consensus 179 ~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~~p 216 (302)
T cd05156 179 VVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYNYR 216 (302)
T ss_pred ceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCCCc
Confidence 478999999999999975 8999999999885544
No 477
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.49 E-value=0.0029 Score=61.21 Aligned_cols=157 Identities=23% Similarity=0.277 Sum_probs=92.9
Q ss_pred cceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 107 SQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 107 ~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
..+||+|+.=.||. + .+.....|||.+|.....-.. ...++.++.+. . -.+...+|+++
T Consensus 6 ~~~i~~G~~R~cy~--H-P~dp~~cIKV~~~~~~~~~~~-------~~~~~k~~~~~---~--------~~~~~~~E~~~ 64 (199)
T PF10707_consen 6 SDLIAQGGERDCYQ--H-PDDPNLCIKVMRPDRGERRRP-------FKRWLKRLRPK---S--------RYRQNRRELRY 64 (199)
T ss_pred CcccccCCCceEEE--C-CCCCCeEEEEEcccccccccc-------chhHHHhhccc---c--------hhHHHHHHHHH
Confidence 46899999999984 3 566778999999875111111 11111111110 0 01122334332
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCC--CceEEEEeeeCC--CCCCC-HHH-HhcCCCCHHHHHHHHHHHHHHHHH
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLS--GSRVLVMEWIDG--IRCTD-PQA-IKGAGIDVGGFLTVGVSAALRQLL 260 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~--~~~vLvmE~i~G--~~L~d-~~~-~~~~~~~~~~~~~~~v~~~L~~Lh 260 (558)
-..+.. -....+..+|++|.... -..-+|+|.|.. |.+.. +.. +...+.+. .+...+....+++.
T Consensus 65 ------y~~l~~-~~~~~~~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~~~~--~~~~~L~~f~~~l~ 135 (199)
T PF10707_consen 65 ------YKQLSL-RRGVDWSHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKEGGLTE--ELRQALDEFKRYLL 135 (199)
T ss_pred ------HHHHhh-ccCCcccccccEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHcCCccH--HHHHHHHHHHHHHH
Confidence 222221 23456678899887443 345689998854 22222 222 23334443 45566778889999
Q ss_pred HCCceecCCCCCCEEEecC--C--CeEEee-cCccccc
Q 008643 261 EFGLFHGDPHPGNIFAMRD--G--RIAYVD-FGNVAEL 293 (558)
Q Consensus 261 ~~Gi~H~DlhPgNIlv~~d--g--~l~liD-FGl~~~l 293 (558)
+++|+.+|++|+||++... | ++.++| ||-...+
T Consensus 136 ~~~Iv~~dl~~~NIv~~~~~~~~~~lvlIDG~G~~~~i 173 (199)
T PF10707_consen 136 DHHIVIRDLNPHNIVVQRRDSGEFRLVLIDGLGEKELI 173 (199)
T ss_pred HcCCeecCCCcccEEEEecCCCceEEEEEeCCCCcccc
Confidence 9999999999999999754 2 689999 5654443
No 478
>PRK12396 5-methylribose kinase; Reviewed
Probab=97.45 E-value=0.0022 Score=68.12 Aligned_cols=90 Identities=12% Similarity=0.111 Sum_probs=56.1
Q ss_pred CCCCCChHHHHHHHHHHhCCChHhhhcccCcceeeeeeccEEEEEEEcCCCcEEEEEEecCCC---------hhhHHHHH
Q 008643 77 DVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGI---------EPIIYRDL 147 (558)
Q Consensus 77 ~~pp~~~~~~~~~ie~elg~~~~~~f~~~~~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~---------~~~i~~Dl 147 (558)
..-++..+.+...+.+.+|. +..- +.+.-++||-|...-||++.+..+++.|+||--.|-+ .++...+.
T Consensus 6 ~y~~l~~~~v~~yl~~~l~~-~~~~-~~~~~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~ 83 (409)
T PRK12396 6 KYFLMEANDVIVYVKEKLSK-FEHA-KGLQCKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIES 83 (409)
T ss_pred cceeCCHhHHHHHHHHhcCC-CCCc-ccceeeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHH
Confidence 34455666666666655552 1111 2333579999999999999983336789999544322 34566777
Q ss_pred HHHHHHHHHhhhhhhhccCCC
Q 008643 148 FLFRTLASFLNGISIQKLGCN 168 (558)
Q Consensus 148 ~ilr~~~~~~~~~~~~~~~~~ 168 (558)
..|+..+.+.....|.-..+|
T Consensus 84 ~aL~~~~~~~P~~VP~vy~~D 104 (409)
T PRK12396 84 DVLQLEEELAPGLVPKVYLFD 104 (409)
T ss_pred HHHHHHHhhCCCcCCeEEEEC
Confidence 888887776665554433344
No 479
>PRK06149 hypothetical protein; Provisional
Probab=97.27 E-value=0.0034 Score=74.84 Aligned_cols=59 Identities=14% Similarity=0.196 Sum_probs=42.1
Q ss_pred HHhhhcCCCCCChHHHHHHHHHHhCCChHhhhcccCcceeeeeeccEEEEEEEcCCCcEEEEEEecCCC
Q 008643 71 LCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGI 139 (558)
Q Consensus 71 L~~Lqd~~pp~~~~~~~~~ie~elg~~~~~~f~~~~~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~ 139 (558)
+..+....|.++.+++.+++++.+|..- + -.+++++. -.+|+.+. . +..+++|+.++..
T Consensus 7 ~~~~~~~~p~ls~~~~~~ll~~~ygl~~-~------~~~L~s~~-d~nf~v~t-~-~~~yVLKi~~~~~ 65 (972)
T PRK06149 7 IDRSSLPAPDVSEAQAERILAEHYGLSG-T------LTELGSQQ-DRNFRVDS-D-GGRFVLKICHAAY 65 (972)
T ss_pred hccCCCCCCCCCHHHHHHHHHHhcCCce-E------EEecCCcC-cceEEEEe-c-CCcEEEEeCCccC
Confidence 4456667888999999999999888641 1 24665444 47898876 3 4578899998753
No 480
>PRK11768 serine/threonine protein kinase; Provisional
Probab=97.24 E-value=0.0062 Score=63.47 Aligned_cols=31 Identities=35% Similarity=0.513 Sum_probs=26.0
Q ss_pred HCCceecCCCCCCEEEecCCCeEEeecCccccc
Q 008643 261 EFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAEL 293 (558)
Q Consensus 261 ~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l 293 (558)
..|++|+|+||+||+++ + .+.++||+.++.-
T Consensus 195 ~~~liHgD~h~~NvL~~-d-~~~iIDFDd~~~g 225 (325)
T PRK11768 195 RLLRLHGDCHPGNILWR-D-GPHFVDLDDARMG 225 (325)
T ss_pred CccceecCCCchhcccc-C-CcEEEeCCCCCCC
Confidence 34799999999999994 4 6899999998743
No 481
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=97.22 E-value=0.003 Score=64.87 Aligned_cols=30 Identities=23% Similarity=0.277 Sum_probs=26.4
Q ss_pred CCceecCCCCCCEEEecCCCeEEeecCcccc
Q 008643 262 FGLFHGDPHPGNIFAMRDGRIAYVDFGNVAE 292 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~ 292 (558)
.|++|+|+|++|++++. +.+.++||+.+..
T Consensus 187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~~ 216 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCTI 216 (313)
T ss_pred CceEcCCCCcccEEEeC-CcEEEEECccccc
Confidence 58999999999999987 7899999997653
No 482
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=97.20 E-value=0.00096 Score=69.95 Aligned_cols=30 Identities=30% Similarity=0.395 Sum_probs=24.7
Q ss_pred HCCceecCCCCCCEEEecCCCeEEeecCccc
Q 008643 261 EFGLFHGDPHPGNIFAMRDGRIAYVDFGNVA 291 (558)
Q Consensus 261 ~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~ 291 (558)
...++|+|+|||||++++++ ++++||-.+.
T Consensus 191 ~~~llHGDl~~gNi~~~~~~-~~~iD~e~~~ 220 (370)
T TIGR01767 191 AETLLHGDLHSGSIFVSEHE-TKVIDPEFAF 220 (370)
T ss_pred cceeeeccCCcccEEEcCCC-CEEEcCcccc
Confidence 34789999999999997654 8899997654
No 483
>PLN02236 choline kinase
Probab=97.15 E-value=0.0083 Score=63.08 Aligned_cols=34 Identities=24% Similarity=0.351 Sum_probs=28.7
Q ss_pred CCceecCCCCCCEEEec-CCCeEEeecCcccccCh
Q 008643 262 FGLFHGDPHPGNIFAMR-DGRIAYVDFGNVAELSQ 295 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~-dg~l~liDFGl~~~l~~ 295 (558)
..+.|+|++++||+++. ++.++++||..++.-++
T Consensus 200 ~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~~~~ 234 (344)
T PLN02236 200 IGFCHNDLQYGNIMIDEETRAITIIDYEYASYNPV 234 (344)
T ss_pred ceEEeCCCCcCcEEEeCCCCcEEEEeehhccccch
Confidence 37899999999999986 47899999998875443
No 484
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=97.12 E-value=0.00037 Score=68.89 Aligned_cols=227 Identities=15% Similarity=0.165 Sum_probs=130.6
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecC-CChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRP-GIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp-~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
..++..-.|..++|++ .|..+++|+..- +...++.+|... ||-+ +.
T Consensus 196 tkl~e~hsgelwrgrw--qgndivakil~vr~~t~risrdfne-------------------------efp~-----lr- 242 (448)
T KOG0195|consen 196 TKLAESHSGELWRGRW--QGNDIVAKILNVREVTARISRDFNE-------------------------EFPA-----LR- 242 (448)
T ss_pred hhhccCCCcccccccc--cCcchhhhhhhhhhcchhhcchhhh-------------------------hCcc-----ee-
Confidence 3566777899999999 577888887642 222233333210 0000 00
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC-CC--CHHHHHHHHHHHHHHHHHHCC
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA-GI--DVGGFLTVGVSAALRQLLEFG 263 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~-~~--~~~~~~~~~v~~~L~~Lh~~G 263 (558)
...|+|+.-....+..+|.. +++..|++-++|......... -. ..+-.+...+..|+.|||+..
T Consensus 243 ifshpnilpvlgacnsppnl-------------v~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhsle 309 (448)
T KOG0195|consen 243 IFSHPNILPVLGACNSPPNL-------------VIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLE 309 (448)
T ss_pred eecCCchhhhhhhccCCCCc-------------eEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcc
Confidence 01267777777777776665 899999998888765322111 12 233345667889999999753
Q ss_pred --ceecCCCCCCEEEecCCC--eEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCC---CCCCCcccHH
Q 008643 264 --LFHGDPHPGNIFAMRDGR--IAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFL---AKGTDVSPII 336 (558)
Q Consensus 264 --i~H~DlhPgNIlv~~dg~--l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~---~~~~Di~~l~ 336 (558)
+----+....++|++|-+ +...|--++-+ ...| ...+.+|+|+.+....- -...|+|+|.
T Consensus 310 p~ipr~~lns~hvmidedltarismad~kfsfq--e~gr-----------~y~pawmspealqrkped~n~raadmwsfa 376 (448)
T KOG0195|consen 310 PMIPRFYLNSKHVMIDEDLTARISMADTKFSFQ--EVGR-----------AYSPAWMSPEALQRKPEDLNIRAADMWSFA 376 (448)
T ss_pred hhhhhhhcccceEEecchhhhheecccceeeee--cccc-----------ccCcccCCHHHHhcCchhcchhhhhHHHHH
Confidence 222235677888887743 44444222211 1111 12556777776654322 2347999999
Q ss_pred HHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHhhhhhcCCCCC
Q 008643 337 PALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFK 400 (558)
Q Consensus 337 ~~l~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lP~~~~~~~rsl~~legi~~~LdP~~~ 400 (558)
..++++-++. .++.+++--+.--++ .+......+||..+.-+-.++.+ |..-||.-+
T Consensus 377 illwel~tre--vpfadlspmecgmki--aleglrv~ippgis~hm~klm~i---cmnedpgkr 433 (448)
T KOG0195|consen 377 ILLWELNTRE--VPFADLSPMECGMKI--ALEGLRVHIPPGISRHMNKLMNI---CMNEDPGKR 433 (448)
T ss_pred HHHHHhhccc--cccccCCchhhhhhh--hhccccccCCCCccHHHHHHHHH---HhcCCCCcC
Confidence 9999987642 344444332221111 12345667899887666666554 888887544
No 485
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=96.98 E-value=0.0006 Score=74.21 Aligned_cols=184 Identities=18% Similarity=0.118 Sum_probs=110.7
Q ss_pred ceeeeeeccEEEEEEEc-CCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcH
Q 008643 108 QTIAAASLGQVYRATLR-ETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDY 186 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~-~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~ 186 (558)
..||.|.|+-|+....+ .++..+++|-...++.. ...|+.-+..+ +-
T Consensus 271 ~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~-~~~di~sl~ev-------------------~l------------ 318 (524)
T KOG0601|consen 271 SKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLAT-FASDIFSLGEV-------------------IL------------ 318 (524)
T ss_pred EEccCCccccceeeeecCCCCceEeChhhhccccc-hHhhhcchhhh-------------------hH------------
Confidence 68999999999998865 67788999965544332 12222211111 00
Q ss_pred HHHHHHHHHHHHhcCCCCCeeece--eeecCCCceEEEEeeeCCCCCCCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHCC
Q 008643 187 TLEARNMEDFLENFKDDPTVKIPR--VYKRLSGSRVLVMEWIDGIRCTDPQAIKG-AGIDVGGFLTVGVSAALRQLLEFG 263 (558)
Q Consensus 187 ~~Ea~n~~~~~~~~~~~~~v~vP~--v~~~~~~~~vLvmE~i~G~~L~d~~~~~~-~~~~~~~~~~~~v~~~L~~Lh~~G 263 (558)
|+ .+.. ...++. .-|..-...++..|||+|++......... ...+.......++..++.++|+.+
T Consensus 319 --~~--------~l~~--~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~ 386 (524)
T KOG0601|consen 319 --EA--------ILGS--HLPSVGKNSSWSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKL 386 (524)
T ss_pred --hh--------Hhhc--ccccCCCCCCccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchh
Confidence 00 0000 112222 33444455579999999988765443222 234555567788999999999999
Q ss_pred ceecCCCCCCEEEecC-CCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHH-HHHHHHHcCCCCCCCCcccHHHHHHH
Q 008643 264 LFHGDPHPGNIFAMRD-GRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAE-MANDFTRLGFLAKGTDVSPIIPALEA 341 (558)
Q Consensus 264 i~H~DlhPgNIlv~~d-g~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~-~a~~~~~~g~~~~~~Di~~l~~~l~~ 341 (558)
++|.|++|.||++..+ +..++.|||....+.-.. .+.+- .|.-+ .++.+.+--.+...+|+++++..+.+
T Consensus 387 ~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~------~~~~~--~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e 458 (524)
T KOG0601|consen 387 FVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSS------GVFHH--IDRLYPIAEILLEDYPHLSKADIFSLGLSVDE 458 (524)
T ss_pred hhcccccccceeeccchhhhhccccccccccceec------ccccc--cccccccchhhccccccccccccccccccccc
Confidence 9999999999999886 778899999886533211 11111 12222 23333333444556777777655544
Q ss_pred HH
Q 008643 342 IW 343 (558)
Q Consensus 342 l~ 343 (558)
..
T Consensus 459 ~~ 460 (524)
T KOG0601|consen 459 AI 460 (524)
T ss_pred cc
Confidence 43
No 486
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.96 E-value=0.014 Score=57.16 Aligned_cols=96 Identities=17% Similarity=0.234 Sum_probs=63.9
Q ss_pred hHHHHHHHHHHhCCChHhhhcccCcceeeeeeccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhh
Q 008643 83 NQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISI 162 (558)
Q Consensus 83 ~~~~~~~ie~elg~~~~~~f~~~~~~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~ 162 (558)
|..+.+.+.+.+|.. ++ -+.++|.-|.+-+.|+..+ ...++-||+.......
T Consensus 2 w~~i~~qlse~~g~~--~i---~er~~v~gG~inea~~v~d--g~~~~FvK~n~~~~~~--------------------- 53 (286)
T COG3001 2 WQAISQQLSEQLGEG--EI---KEREEVSGGDINEAWRLRD--GTDPFFVKCNQREQLS--------------------- 53 (286)
T ss_pred hHHHHHHHHHHhCch--hh---hcccccCCccccceeEeec--CCcceEEEecchhhHH---------------------
Confidence 445666777778875 22 1245777777777776655 5568999986532111
Q ss_pred hccCCChHHHHHHHHHhhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecC--CCceEEEEeeeCCCCCC
Q 008643 163 QKLGCNAELIVDEFGEKLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRL--SGSRVLVMEWIDGIRCT 232 (558)
Q Consensus 163 ~~~~~~~~~iv~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~vLvmE~i~G~~L~ 232 (558)
-|..|+.+++.+.+ .+.|.||+|+..- .+..||||||++-+++.
T Consensus 54 ----------------------~f~AEa~gL~~la~----s~ti~VP~vi~~G~~~~~sylVle~L~~~~~d 99 (286)
T COG3001 54 ----------------------MFTAEADGLELLAR----SNTITVPKVIAVGASRDHSYLVLEYLPTGPLD 99 (286)
T ss_pred ----------------------HHHHHHHHHHHHHh----cCCccccceEEecCCCCeeEEEEeeccCCCCC
Confidence 14556677666654 3568999998654 35679999999987776
No 487
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=96.85 E-value=0.011 Score=63.81 Aligned_cols=141 Identities=18% Similarity=0.102 Sum_probs=92.6
Q ss_pred ccEEEEEEEcCCCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHhhHhhhcHHHHHHHHH
Q 008643 115 LGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYTLEARNME 194 (558)
Q Consensus 115 ~GqVy~a~~~~~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~~~iv~e~~~~l~~Eld~~~Ea~n~~ 194 (558)
-...|+|+...||..|+.|..+-+-......|.. +++.|++. -|.|++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~-----------------------lve~wkkl---------~h~NvV 336 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTS-----------------------LVEAWKKL---------CHTNVV 336 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchH-----------------------HHHHHHHh---------ccCcee
Confidence 3678999999999999999874321111112221 22222211 278888
Q ss_pred HHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCC-CCCCHHH--------------HhcCCCCHHH--HHHHHHHHHHH
Q 008643 195 DFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGI-RCTDPQA--------------IKGAGIDVGG--FLTVGVSAALR 257 (558)
Q Consensus 195 ~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~-~L~d~~~--------------~~~~~~~~~~--~~~~~v~~~L~ 257 (558)
.|++.|.....- ....++|.+|.++. +|.++.- ....+..... .+..|+..+|.
T Consensus 337 ~frevf~t~tF~---------D~SlvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~ 407 (655)
T KOG3741|consen 337 PFREVFLTYTFG---------DLSLVLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALY 407 (655)
T ss_pred ehhhhhhhhccC---------cceEEEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHH
Confidence 888887633211 34458999998862 3322110 0111122232 36679999999
Q ss_pred HHHHCCceecCCCCCCEEEecCCCeEEeecCcccccChh
Q 008643 258 QLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQ 296 (558)
Q Consensus 258 ~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~ 296 (558)
++|+.|+--.-+.|.+|+++.+-+++|.-.|++..+.++
T Consensus 408 sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d 446 (655)
T KOG3741|consen 408 SIHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQED 446 (655)
T ss_pred HHHhcCceeecccHhHeEeeCcceEEEecccceeeecCC
Confidence 999999999999999999988889999999998876543
No 488
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=96.81 E-value=0.0032 Score=60.38 Aligned_cols=95 Identities=16% Similarity=0.215 Sum_probs=67.9
Q ss_pred HHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCC----HHHHhcCCCCHHHHHHHHHHHHHHHHHH---CCceecC
Q 008643 196 FLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTD----PQAIKGAGIDVGGFLTVGVSAALRQLLE---FGLFHGD 268 (558)
Q Consensus 196 ~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d----~~~~~~~~~~~~~~~~~~v~~~L~~Lh~---~Gi~H~D 268 (558)
+...|.+.+ ++|+++.. | .+++++||+..+++.. ........+.....+..+++..+.+++. ..+.-.|
T Consensus 12 ll~~l~~~~--~~pk~lG~-C-G~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcD 87 (188)
T PF12260_consen 12 LLQLLQGSE--PFPKLLGS-C-GRFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFFYLCD 87 (188)
T ss_pred HHHHcCCCC--CCCCeeeE-C-CCEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcEEEee
Confidence 334455544 78999884 3 4477999998776532 1112233344455677888888888876 4588899
Q ss_pred CCCCCEEEecCCCeEEeecCcccccC
Q 008643 269 PHPGNIFAMRDGRIAYVDFGNVAELS 294 (558)
Q Consensus 269 lhPgNIlv~~dg~l~liDFGl~~~l~ 294 (558)
.+|+|+-++.+|+++++|...+...+
T Consensus 88 v~~~nfgv~~~~~lk~iDld~v~~~~ 113 (188)
T PF12260_consen 88 VSPDNFGVNDDGRLKLIDLDDVFVED 113 (188)
T ss_pred cchHHeEEeCCCcEEEEechhcchhH
Confidence 99999999999999999998876543
No 489
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.68 E-value=0.018 Score=60.15 Aligned_cols=32 Identities=22% Similarity=0.435 Sum_probs=27.4
Q ss_pred ceecCCCCCCEEEec-CCCeEEeecCcccccCh
Q 008643 264 LFHGDPHPGNIFAMR-DGRIAYVDFGNVAELSQ 295 (558)
Q Consensus 264 i~H~DlhPgNIlv~~-dg~l~liDFGl~~~l~~ 295 (558)
+.|.|++|+||++++ ++++++|||..++.-++
T Consensus 184 ~CHnDl~~~NiL~~~~~~~l~lID~EYag~nd~ 216 (330)
T PLN02421 184 FAHNDLLSGNLMLNEDEGKLYFIDFEYGSYSYR 216 (330)
T ss_pred EEECCCCcccEEEeCCCCcEEEEcccccCCCcc
Confidence 789999999999975 47899999998875544
No 490
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=96.61 E-value=0.026 Score=54.59 Aligned_cols=55 Identities=22% Similarity=0.250 Sum_probs=40.0
Q ss_pred eEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCcc
Q 008643 219 RVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNV 290 (558)
Q Consensus 219 ~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~ 290 (558)
+-||.||++...-. ...-..++..-+..+|..||+-+|+|+.|.. +| +|+|||.+
T Consensus 152 ~aIVKD~v~~~~~~------------~~~~~~~~~~dl~~~~k~gI~~~Dv~~~ny~---~G--~lvDfs~~ 206 (207)
T PF13095_consen 152 RAIVKDFVPDDPPL------------QIRDIPQMLRDLKILHKLGIVPRDVKPRNYR---GG--KLVDFSSS 206 (207)
T ss_pred EEEEEeecCCcccc------------chhHHHHHHHHHHHHHHCCeeeccCcccccc---CC--EEEecccC
Confidence 36888888764411 1112345667788999999999999999997 44 78999964
No 491
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=96.40 E-value=0.0091 Score=60.98 Aligned_cols=89 Identities=19% Similarity=0.214 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHC
Q 008643 188 LEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA-----GIDVGGFLTVGVSAALRQLLEF 262 (558)
Q Consensus 188 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~-----~~~~~~~~~~~v~~~L~~Lh~~ 262 (558)
..|.|+.+|...+.+...-.+|++ ++++||+..+++....+..+. .....+.+..||++||.|||..
T Consensus 124 lvHsnlvkfH~yw~d~K~~e~~rv--------iFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~ 195 (458)
T KOG1266|consen 124 LVHSNLVKFHKYWTDKKYEEKPRV--------IFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC 195 (458)
T ss_pred HHHHHHHHHHHhhcccccccccce--------EEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc
Confidence 359999999998877654344443 789999999998775432211 1223356889999999999987
Q ss_pred --CceecCCCCCCEEEecCCCeEE
Q 008643 263 --GLFHGDPHPGNIFAMRDGRIAY 284 (558)
Q Consensus 263 --Gi~H~DlhPgNIlv~~dg~l~l 284 (558)
-++|+.+.-.-|++.++|-+|+
T Consensus 196 ~PpiihgnlTc~tifiq~ngLIki 219 (458)
T KOG1266|consen 196 DPPIIHGNLTCDTIFIQHNGLIKI 219 (458)
T ss_pred CCccccCCcchhheeecCCceEEe
Confidence 4999999999999998887765
No 492
>KOG2269 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.03 E-value=0.057 Score=55.49 Aligned_cols=196 Identities=22% Similarity=0.258 Sum_probs=113.3
Q ss_pred hhhcccCcceeeeeeccEEEEEEEc--C--------CCcEEEEEEecCCChhhHHHHHHHHHHHHHHhhhhhhhccCCCh
Q 008643 100 AVFSKISSQTIAAASLGQVYRATLR--E--------TGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNA 169 (558)
Q Consensus 100 ~~f~~~~~~pIg~Gs~GqVy~a~~~--~--------~G~~VAVKv~rp~~~~~i~~Dl~ilr~~~~~~~~~~~~~~~~~~ 169 (558)
.+++.++ -.|+.|.-+.|..|.-- . .-+++||||.+..+.+--.+|-+|--.. ++-.+ ....++
T Consensus 251 gvle~i~-GiIsTGKEsvvlHAY~GS~E~~~qd~ql~ptecAIKvfKTTLnEFKnRd~YiKDDf-RFKDR----FSK~Np 324 (531)
T KOG2269|consen 251 GVLESID-GIISTGKESVVLHAYAGSNEHGHQDPQLSPTECAIKVFKTTLNEFKNRDEYIKDDF-RFKDR----FSKQNP 324 (531)
T ss_pred hhHHhhh-hhhhcCcceEEEEeccCcccccccCcccCchHHHHHHHHHHHHHHhhhhhhhccch-hhhhh----hcccCc
Confidence 4455555 36788888888877320 1 1246888887654433333333221110 01111 112344
Q ss_pred HHHHHHHHHhhHhhhcHHHHHHHHHHHHHhcCCCCCeeeceeeecCCCceEEEEeeeCCCCCCCHHHHhcC--CCCHHHH
Q 008643 170 ELIVDEFGEKLLEELDYTLEARNMEDFLENFKDDPTVKIPRVYKRLSGSRVLVMEWIDGIRCTDPQAIKGA--GIDVGGF 247 (558)
Q Consensus 170 ~~iv~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~d~~~~~~~--~~~~~~~ 247 (558)
..|+.-++ ..|..|+.|+... .+.+|.++. -.+++|||.||...-+... .++.. .-+..+.
T Consensus 325 R~i~~mWA---------EkEmhNL~RMq~~-----GlpcP~vV~--lkkhvLVMsFiGd~~~aAP-kLK~v~l~d~E~~~ 387 (531)
T KOG2269|consen 325 RGILKMWA---------EKEMHNLSRMQKH-----GLPCPQVVK--LKKHVLVMSFIGDQGLAAP-KLKNVELTDDERRN 387 (531)
T ss_pred HHHHHHHH---------HHHHHHHHHHHhc-----CCCCCceee--eecceEEEEeecCCCCCCc-cccccccChHHHHH
Confidence 44544442 2456788888664 344555543 4567999999954333211 12222 2223344
Q ss_pred HHHHHHHHHHHH-HHCCceecCCCCCCEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCC
Q 008643 248 LTVGVSAALRQL-LEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFL 326 (558)
Q Consensus 248 ~~~~v~~~L~~L-h~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~ 326 (558)
.-.|+...+..| |+.-++|+|+.--|+|..+ |++.+||-.-+...+..... .++.+|...+..-+.+.|..
T Consensus 388 aY~q~~~~M~~lY~Ec~LVHADlSEyN~Lw~~-gKvw~IDVsQsvep~HP~~L-------eFL~RDc~Ni~~FF~r~G~p 459 (531)
T KOG2269|consen 388 AYDQVQSIMCRLYKECLLVHADLSEYNLLWTP-GKVWVIDVSQSVEPSHPRSL-------EFLTRDCQNIITFFTRIGTP 459 (531)
T ss_pred HHHHHHHHHHHHHHhhheeecchhhhhheecC-CceEEEechhccCCCCcchh-------HHHHHHHHHHHHHHHhcCCC
Confidence 556777777776 6889999999999999976 59999998776655433221 23346777777777777754
No 493
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=95.86 E-value=0.083 Score=54.52 Aligned_cols=31 Identities=13% Similarity=0.139 Sum_probs=28.1
Q ss_pred CCceecCCCCCCEEEecCCCeEEeecCcccc
Q 008643 262 FGLFHGDPHPGNIFAMRDGRIAYVDFGNVAE 292 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~ 292 (558)
.|++|+|++++|++++.+|.+.++||-.+..
T Consensus 196 ~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~ 226 (309)
T TIGR02904 196 TVLVHGKLSLSHFLYDETRGGYFINFEKASF 226 (309)
T ss_pred eeeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence 3899999999999999999999999987764
No 494
>PRK10271 thiK thiamine kinase; Provisional
Probab=95.79 E-value=0.0078 Score=57.46 Aligned_cols=33 Identities=21% Similarity=0.387 Sum_probs=28.1
Q ss_pred CceecCCCCCCEEEecCCCeEEeecCcccccChh
Q 008643 263 GLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQ 296 (558)
Q Consensus 263 Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~l~~~ 296 (558)
-..|+|+||+|++++.+| ++++||+.++.-++.
T Consensus 78 ~p~H~D~~~~N~~~~~~~-~~lIDwe~a~~gDp~ 110 (188)
T PRK10271 78 APLHMDVHAGNLVHSASG-LRLIDWEYAGDGDIA 110 (188)
T ss_pred eeecCCCCCccEEEECCC-EEEEeCCcccCCCHH
Confidence 468999999999998776 999999999876653
No 495
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=95.58 E-value=0.06 Score=56.25 Aligned_cols=81 Identities=15% Similarity=0.101 Sum_probs=48.6
Q ss_pred Ceeeceeee-cCCCceEEEEeeeCCCCCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHH--CCceecCCCCCCEEEecCCC
Q 008643 205 TVKIPRVYK-RLSGSRVLVMEWIDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLE--FGLFHGDPHPGNIFAMRDGR 281 (558)
Q Consensus 205 ~v~vP~v~~-~~~~~~vLvmE~i~G~~L~d~~~~~~~~~~~~~~~~~~v~~~L~~Lh~--~Gi~H~DlhPgNIlv~~dg~ 281 (558)
...-|.++. +.+-..|++|++- |+++.-.. .........+.... ..+-+..+ .-+=|||+|-+||+|+ +|+
T Consensus 286 ~~e~~~vv~~de~~y~yl~~kdh-gt~is~ik---~~~~~e~lsff~s~-~sil~~lekkf~fehrnlt~~niLId-~Gn 359 (488)
T COG5072 286 FLETLKVVSLDETLYLYLHFKDH-GTPISIIK---ADRSEEELSFFWSC-ISILDILEKKFPFEHRNLTLDNILID-EGN 359 (488)
T ss_pred hhhcceEEecCCceEEEEEEecC-Cceeeeee---cccHHHHHHHHHHH-HHHHhhhhhcCCcccccccccceeee-cCc
Confidence 344455555 3344457777764 66665321 11111222222222 23333333 4678999999999998 999
Q ss_pred eEEeecCccc
Q 008643 282 IAYVDFGNVA 291 (558)
Q Consensus 282 l~liDFGl~~ 291 (558)
|.||||-+++
T Consensus 360 vtLIDfklsR 369 (488)
T COG5072 360 VTLIDFKLSR 369 (488)
T ss_pred eEEEEeeeee
Confidence 9999999988
No 496
>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []. Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process
Probab=95.53 E-value=0.044 Score=55.02 Aligned_cols=31 Identities=19% Similarity=0.160 Sum_probs=27.1
Q ss_pred ceeeeeeccEEEEEEEcCCCcEEEEEEecCCC
Q 008643 108 QTIAAASLGQVYRATLRETGEDVAIKVQRPGI 139 (558)
Q Consensus 108 ~pIg~Gs~GqVy~a~~~~~G~~VAVKv~rp~~ 139 (558)
.++..|+.+.|+.++. .+|+++++|+..|..
T Consensus 8 ~~~~~g~~s~V~pv~~-~dG~~avLKl~~p~~ 38 (253)
T PF04655_consen 8 GPPAHGSSSLVVPVRR-ADGTPAVLKLAPPHA 38 (253)
T ss_pred CCCCCCcceEEEEEEc-CCCCeEEEEecCCcc
Confidence 4677899999999998 799999999998763
No 497
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=95.53 E-value=0.0028 Score=73.13 Aligned_cols=129 Identities=16% Similarity=0.140 Sum_probs=93.4
Q ss_pred CCCceEEEEeeeCCCCCCCHHHHhcCC---CCHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEecCCCeEEeecCccc
Q 008643 215 LSGSRVLVMEWIDGIRCTDPQAIKGAG---IDVGGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVA 291 (558)
Q Consensus 215 ~~~~~vLvmE~i~G~~L~d~~~~~~~~---~~~~~~~~~~v~~~L~~Lh~~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~ 291 (558)
..+..+|+|+|..|+.+... ++..+ .++.+.+...+....++||..-+.|+|++|.|+++..+|+..+.|||...
T Consensus 875 ~rsP~~L~~~~~~~~~~~Sk--l~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~ 952 (1205)
T KOG0606|consen 875 CRSPLPLVGHYLNGGDLPSK--LHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLS 952 (1205)
T ss_pred CCCCcchhhHHhccCCchhh--hhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCcccccc
Confidence 34667899999999877653 23332 34556666677888999999999999999999999999999999998332
Q ss_pred ccC---------------------hh-hHHHHHH---HHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHHHh
Q 008643 292 ELS---------------------QQ-NKQILID---AVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQN 345 (558)
Q Consensus 292 ~l~---------------------~~-~~~~l~~---~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~~~ 345 (558)
... .. .+..+-. ..-+.+.++++|++|+..-.....+.+|.|+.+..+.+.+.+
T Consensus 953 ~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g 1031 (1205)
T KOG0606|consen 953 KVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTG 1031 (1205)
T ss_pred ccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcC
Confidence 211 00 1111110 112345688899999988877778889999999998888863
No 498
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=95.52 E-value=0.0067 Score=69.54 Aligned_cols=77 Identities=8% Similarity=-0.019 Sum_probs=57.1
Q ss_pred eecCCCCC-CEEEecCCCeEEeecCcccccChhhHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 008643 265 FHGDPHPG-NIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIW 343 (558)
Q Consensus 265 ~H~DlhPg-NIlv~~dg~l~liDFGl~~~l~~~~~~~l~~~~~~~~~~d~~~~a~~~~~~g~~~~~~Di~~l~~~l~~l~ 343 (558)
-|.++.|. |+++++++..++.|||....+........ .+...|+..|++|+++....++..+|+|++|+.+++++
T Consensus 499 ~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~----~~~~vGT~~Y~APE~l~~~~~~~~~DiwSlG~il~Ell 574 (669)
T cd05610 499 PTQKPRPHGNLYQTPKQVKIGTPYRTPKSVRRGAAPVE----GERILGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFL 574 (669)
T ss_pred CCCCCCCCCceeECCccccccccCCCchhhhccccccc----CCceeeCccccCHHHcCCCCCCcHHHHHHHHHHHHHHH
Confidence 45666666 77778888889999998876543322110 11234789999999987777788899999999999999
Q ss_pred Hh
Q 008643 344 QN 345 (558)
Q Consensus 344 ~~ 345 (558)
++
T Consensus 575 tG 576 (669)
T cd05610 575 TG 576 (669)
T ss_pred HC
Confidence 85
No 499
>PTZ00384 choline kinase; Provisional
Probab=95.48 E-value=0.2 Score=53.44 Aligned_cols=30 Identities=23% Similarity=0.306 Sum_probs=25.0
Q ss_pred CCceecCCCCCCEEEecCCCeEEeecCcccc
Q 008643 262 FGLFHGDPHPGNIFAMRDGRIAYVDFGNVAE 292 (558)
Q Consensus 262 ~Gi~H~DlhPgNIlv~~dg~l~liDFGl~~~ 292 (558)
..+.|.|++++||+.+ ++.+.+|||--++.
T Consensus 227 ~VfCHNDL~~gNIL~~-~~~l~lID~EYA~~ 256 (383)
T PTZ00384 227 VLFCHNDLFFTNILDF-NQGIYFIDFDFAGF 256 (383)
T ss_pred eeeeeccCCcccEEec-CCCEEEEEeccccC
Confidence 5789999999999874 56799999977653
No 500
>PTZ00296 choline kinase; Provisional
Probab=95.15 E-value=0.48 Score=51.54 Aligned_cols=73 Identities=11% Similarity=0.152 Sum_probs=42.7
Q ss_pred HHHHHhhhcC-CCCCChHHHHHHHHHHhCCChHhh-hcccCcceeeeeeccEEEEEEEcCC--------CcEEEEEEecC
Q 008643 68 MNELCILQDD-VPSFPNQVAFNIIEEELGRPLEAV-FSKISSQTIAAASLGQVYRATLRET--------GEDVAIKVQRP 137 (558)
Q Consensus 68 ~~eL~~Lqd~-~pp~~~~~~~~~ie~elg~~~~~~-f~~~~~~pIg~Gs~GqVy~a~~~~~--------G~~VAVKv~rp 137 (558)
.++|..+-.. .+-...+.+..++.+... .|..+ -++++-+++..|=--++|++..... ++.|.+++.-+
T Consensus 70 ~~~l~~~~~~~~~~~~~~~~~~i~~~~vp-~W~~~~~~~I~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~ 148 (442)
T PTZ00296 70 KNDIPLCAQEFSDLTDPLYIKKICLEKVP-EWRRFTEDDVRVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGK 148 (442)
T ss_pred hhhhhHHHHhhcccCChHHHHHHHHHHCC-ccccCCcccEEEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCC
Confidence 3455554444 334455556655554332 23211 1234557888888899999987421 56899999776
Q ss_pred CChh
Q 008643 138 GIEP 141 (558)
Q Consensus 138 ~~~~ 141 (558)
+...
T Consensus 149 ~te~ 152 (442)
T PTZ00296 149 DVDE 152 (442)
T ss_pred Cccc
Confidence 6443
Done!