Query 008645
Match_columns 558
No_of_seqs 250 out of 817
Neff 5.8
Searched_HMMs 46136
Date Thu Mar 28 14:47:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008645.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008645hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02517 phosphatidylcholine-s 100.0 9.6E-83 2.1E-87 689.6 22.2 466 37-525 70-609 (642)
2 KOG2369 Lecithin:cholesterol a 100.0 1.9E-70 4.1E-75 579.7 19.5 386 43-530 32-449 (473)
3 PF02450 LCAT: Lecithin:choles 100.0 5E-67 1.1E-71 557.9 21.3 366 74-520 2-389 (389)
4 PLN02733 phosphatidylcholine-s 100.0 4.7E-55 1E-59 470.9 23.8 351 37-500 15-405 (440)
5 PF01674 Lipase_2: Lipase (cla 98.8 8.1E-09 1.7E-13 102.9 7.6 110 132-244 16-131 (219)
6 COG2267 PldB Lysophospholipase 98.7 3.2E-08 6.9E-13 102.8 9.1 95 132-240 48-145 (298)
7 PF07819 PGAP1: PGAP1-like pro 98.7 4.6E-08 9.9E-13 97.8 7.6 69 170-248 64-135 (225)
8 TIGR01607 PST-A Plasmodium sub 98.6 1.1E-07 2.5E-12 99.7 8.6 98 133-236 62-185 (332)
9 COG1075 LipA Predicted acetylt 98.2 2.2E-06 4.9E-11 90.6 7.1 96 133-242 74-170 (336)
10 PLN02965 Probable pheophorbida 98.1 9.5E-06 2E-10 81.0 8.9 88 132-235 17-106 (255)
11 PF05057 DUF676: Putative seri 98.1 1E-05 2.2E-10 80.2 8.5 108 133-245 19-134 (217)
12 PLN02211 methyl indole-3-aceta 98.0 1.6E-05 3.5E-10 81.1 8.5 87 132-234 32-120 (273)
13 PF12697 Abhydrolase_6: Alpha/ 98.0 1.4E-05 3.1E-10 74.6 7.2 90 132-238 12-103 (228)
14 PHA02857 monoglyceride lipase; 98.0 4.4E-05 9.5E-10 76.6 10.8 91 131-235 38-131 (276)
15 PRK10749 lysophospholipase L2; 98.0 2.8E-05 6.2E-10 81.2 9.7 91 132-235 68-165 (330)
16 PRK00870 haloalkane dehalogena 98.0 3E-05 6.4E-10 79.3 9.5 90 130-235 58-149 (302)
17 TIGR01836 PHA_synth_III_C poly 97.9 2.5E-05 5.5E-10 82.2 7.4 86 134-237 83-172 (350)
18 PLN02298 hydrolase, alpha/beta 97.9 4.5E-05 9.8E-10 79.1 8.6 90 133-236 75-169 (330)
19 PLN02385 hydrolase; alpha/beta 97.7 0.00013 2.9E-09 76.6 9.5 89 133-235 103-196 (349)
20 PRK10985 putative hydrolase; P 97.7 0.00016 3.4E-09 75.5 9.4 94 132-240 74-172 (324)
21 PLN02824 hydrolase, alpha/beta 97.7 0.00015 3.3E-09 73.6 8.9 90 131-236 42-137 (294)
22 PF06028 DUF915: Alpha/beta hy 97.6 7.8E-05 1.7E-09 76.2 6.1 78 150-239 68-146 (255)
23 TIGR03101 hydr2_PEP hydrolase, 97.6 0.00023 5E-09 73.2 9.2 89 133-236 44-134 (266)
24 KOG2029 Uncharacterized conser 97.5 0.0002 4.4E-09 79.5 7.8 118 154-274 489-617 (697)
25 PRK11126 2-succinyl-6-hydroxy- 97.5 0.00037 7.9E-09 68.1 8.7 84 132-235 16-101 (242)
26 TIGR02427 protocat_pcaD 3-oxoa 97.5 0.00029 6.3E-09 67.0 7.1 85 132-235 27-113 (251)
27 TIGR03695 menH_SHCHC 2-succiny 97.4 0.0005 1.1E-08 65.1 8.5 87 132-235 15-104 (251)
28 PLN02511 hydrolase 97.4 0.00041 8.8E-09 74.6 8.7 92 133-237 117-211 (388)
29 PRK10349 carboxylesterase BioH 97.4 0.00041 9E-09 68.8 8.0 81 131-235 26-108 (256)
30 PLN02652 hydrolase; alpha/beta 97.4 0.00053 1.2E-08 74.2 9.0 92 132-236 150-244 (395)
31 TIGR03100 hydr1_PEP hydrolase, 97.4 0.0009 1.9E-08 68.3 9.8 86 133-236 45-134 (274)
32 TIGR02240 PHA_depoly_arom poly 97.4 0.00047 1E-08 69.5 7.6 86 132-236 39-126 (276)
33 TIGR03056 bchO_mg_che_rel puta 97.4 0.00084 1.8E-08 66.3 9.1 87 132-236 42-130 (278)
34 PRK03592 haloalkane dehalogena 97.3 0.00071 1.5E-08 68.8 8.6 87 131-235 40-127 (295)
35 KOG3724 Negative regulator of 97.3 0.00028 6.1E-09 80.5 5.7 70 167-246 154-230 (973)
36 TIGR03611 RutD pyrimidine util 97.3 0.00074 1.6E-08 65.1 7.9 85 132-234 27-113 (257)
37 TIGR01250 pro_imino_pep_2 prol 97.3 0.0011 2.4E-08 64.7 9.0 86 133-234 41-129 (288)
38 PF00561 Abhydrolase_1: alpha/ 97.3 0.00041 8.9E-09 66.1 5.6 51 173-236 28-79 (230)
39 PLN02872 triacylglycerol lipas 97.3 0.00036 7.9E-09 75.5 5.7 89 136-235 98-196 (395)
40 TIGR03343 biphenyl_bphD 2-hydr 97.2 0.0013 2.9E-08 65.7 8.7 83 136-235 51-135 (282)
41 TIGR01839 PHA_synth_II poly(R) 97.1 0.0016 3.5E-08 73.1 8.5 92 135-239 237-331 (560)
42 PLN02679 hydrolase, alpha/beta 97.1 0.0018 3.8E-08 68.8 8.5 87 132-235 102-190 (360)
43 TIGR01738 bioH putative pimelo 97.0 0.0015 3.3E-08 62.0 7.1 80 131-234 17-98 (245)
44 TIGR01838 PHA_synth_I poly(R)- 97.0 0.0021 4.6E-08 72.2 9.2 90 135-237 210-303 (532)
45 PF12695 Abhydrolase_5: Alpha/ 97.0 0.0028 6.1E-08 56.6 8.1 79 132-234 13-93 (145)
46 PRK07868 acyl-CoA synthetase; 97.0 0.0019 4E-08 77.7 8.8 84 137-237 91-178 (994)
47 PRK10673 acyl-CoA esterase; Pr 97.0 0.0024 5.3E-08 62.6 8.1 82 133-234 31-114 (255)
48 PRK13604 luxD acyl transferase 96.9 0.0023 5.1E-08 67.1 7.5 66 133-203 52-123 (307)
49 PRK03204 haloalkane dehalogena 96.9 0.0034 7.3E-08 64.2 8.4 86 132-235 48-135 (286)
50 COG3545 Predicted esterase of 96.9 0.0048 1E-07 59.6 8.8 93 169-278 44-153 (181)
51 PLN02578 hydrolase 96.8 0.0037 8.1E-08 66.0 8.3 85 132-235 100-186 (354)
52 PRK05855 short chain dehydroge 96.7 0.0037 8E-08 69.1 7.5 91 132-236 39-131 (582)
53 PLN03087 BODYGUARD 1 domain co 96.6 0.0072 1.6E-07 67.2 9.3 88 132-237 215-310 (481)
54 cd00741 Lipase Lipase. Lipase 96.6 0.0055 1.2E-07 56.9 7.1 66 169-243 8-74 (153)
55 PLN03084 alpha/beta hydrolase 96.6 0.0075 1.6E-07 65.2 9.1 89 131-236 140-232 (383)
56 PF05990 DUF900: Alpha/beta hy 96.6 0.015 3.3E-07 58.5 10.7 60 171-234 75-135 (233)
57 KOG1455 Lysophospholipase [Lip 96.6 0.0066 1.4E-07 63.2 8.0 75 132-207 69-148 (313)
58 PLN02894 hydrolase, alpha/beta 96.5 0.011 2.5E-07 63.9 9.8 88 131-235 118-210 (402)
59 PF01764 Lipase_3: Lipase (cla 96.4 0.0081 1.8E-07 54.3 6.2 64 172-242 47-111 (140)
60 PF00975 Thioesterase: Thioest 96.3 0.012 2.6E-07 57.3 7.5 91 131-237 13-105 (229)
61 PRK05077 frsA fermentation/res 96.3 0.012 2.7E-07 64.0 8.1 87 132-236 209-300 (414)
62 PF06821 Ser_hydrolase: Serine 96.3 0.004 8.7E-08 59.9 3.9 53 169-237 40-92 (171)
63 cd00707 Pancreat_lipase_like P 96.2 0.023 4.9E-07 58.5 9.5 51 172-235 93-146 (275)
64 PRK08775 homoserine O-acetyltr 96.2 0.013 2.8E-07 61.6 7.4 85 133-237 84-174 (343)
65 PLN02606 palmitoyl-protein thi 96.1 0.019 4.1E-07 60.1 8.3 41 190-241 97-137 (306)
66 PRK14875 acetoin dehydrogenase 96.1 0.022 4.7E-07 59.5 8.8 86 131-236 144-232 (371)
67 PF07082 DUF1350: Protein of u 96.1 0.062 1.3E-06 54.8 11.5 125 133-275 35-168 (250)
68 TIGR03230 lipo_lipase lipoprot 96.1 0.019 4.1E-07 63.2 8.5 72 150-234 73-152 (442)
69 KOG2564 Predicted acetyltransf 96.1 0.02 4.4E-07 59.2 7.9 72 133-208 89-166 (343)
70 PLN02633 palmitoyl protein thi 96.0 0.009 2E-07 62.6 5.3 56 170-241 81-136 (314)
71 PLN00021 chlorophyllase 96.0 0.022 4.8E-07 59.9 8.3 93 132-239 66-168 (313)
72 PF02089 Palm_thioest: Palmito 95.9 0.01 2.2E-07 61.6 4.9 41 189-241 81-121 (279)
73 TIGR01249 pro_imino_pep_1 prol 95.9 0.015 3.3E-07 59.9 6.3 79 140-235 48-129 (306)
74 COG4814 Uncharacterized protei 95.8 0.02 4.3E-07 58.4 6.5 59 171-237 118-177 (288)
75 KOG4178 Soluble epoxide hydrol 95.6 0.042 9.1E-07 57.9 8.0 88 132-237 58-149 (322)
76 PRK11071 esterase YqiA; Provis 95.4 0.094 2E-06 50.9 9.6 60 136-208 21-81 (190)
77 TIGR01392 homoserO_Ac_trn homo 95.4 0.026 5.7E-07 59.4 6.2 50 170-236 111-162 (351)
78 KOG2541 Palmitoyl protein thio 95.4 0.028 6.1E-07 57.8 5.8 42 189-242 93-134 (296)
79 cd00519 Lipase_3 Lipase (class 95.2 0.045 9.8E-07 54.2 6.9 64 171-243 110-174 (229)
80 PF08538 DUF1749: Protein of u 95.2 0.045 9.7E-07 57.4 6.8 90 132-234 50-146 (303)
81 KOG1454 Predicted hydrolase/ac 95.1 0.043 9.3E-07 58.1 6.5 89 133-238 73-168 (326)
82 TIGR01849 PHB_depoly_PhaZ poly 94.9 0.081 1.8E-06 57.7 7.9 97 133-247 118-221 (406)
83 PF05277 DUF726: Protein of un 94.9 0.048 1E-06 58.2 6.1 56 187-250 218-277 (345)
84 KOG4409 Predicted hydrolase/ac 94.8 0.13 2.7E-06 54.9 8.9 88 138-242 110-200 (365)
85 COG2819 Predicted hydrolase of 94.8 0.035 7.5E-07 57.1 4.6 51 172-235 121-171 (264)
86 PF01083 Cutinase: Cutinase; 94.8 0.22 4.7E-06 48.2 9.9 92 144-242 35-128 (179)
87 PRK10566 esterase; Provisional 94.8 0.094 2E-06 51.7 7.6 74 133-208 42-127 (249)
88 TIGR03502 lipase_Pla1_cef extr 94.7 0.071 1.5E-06 62.6 7.3 78 131-208 462-575 (792)
89 COG4782 Uncharacterized protei 94.6 0.073 1.6E-06 56.9 6.5 62 172-239 174-236 (377)
90 PRK07581 hypothetical protein; 94.6 0.052 1.1E-06 56.6 5.4 36 188-236 123-159 (339)
91 PLN02980 2-oxoglutarate decarb 94.5 0.1 2.2E-06 66.3 8.6 86 132-234 1385-1478(1655)
92 KOG4840 Predicted hydrolases o 94.2 0.06 1.3E-06 54.2 4.6 85 133-233 54-141 (299)
93 KOG4667 Predicted esterase [Li 94.2 0.12 2.7E-06 51.8 6.8 84 133-236 50-139 (269)
94 PLN02162 triacylglycerol lipas 94.1 0.098 2.1E-06 57.7 6.4 66 172-242 261-327 (475)
95 COG3243 PhaC Poly(3-hydroxyalk 94.0 0.13 2.8E-06 56.1 7.0 83 136-236 130-217 (445)
96 TIGR01840 esterase_phb esteras 94.0 0.11 2.4E-06 50.7 6.1 54 173-239 77-133 (212)
97 PF11187 DUF2974: Protein of u 93.9 0.11 2.5E-06 52.1 6.1 50 177-235 73-122 (224)
98 PF00326 Peptidase_S9: Prolyl 93.8 0.16 3.4E-06 49.3 6.8 89 134-236 3-99 (213)
99 PRK00175 metX homoserine O-ace 93.8 0.11 2.4E-06 55.6 6.2 52 169-236 130-182 (379)
100 PLN00413 triacylglycerol lipas 93.7 0.13 2.8E-06 56.9 6.5 64 174-242 269-333 (479)
101 PRK06489 hypothetical protein; 93.7 0.1 2.2E-06 55.2 5.6 35 188-235 153-188 (360)
102 PRK11460 putative hydrolase; P 93.7 0.4 8.6E-06 47.9 9.5 39 170-208 82-123 (232)
103 PF10230 DUF2305: Uncharacteri 93.5 0.31 6.7E-06 50.0 8.6 93 130-235 14-121 (266)
104 PF07859 Abhydrolase_3: alpha/ 93.5 0.27 5.8E-06 47.3 7.7 84 135-234 18-108 (211)
105 PF11288 DUF3089: Protein of u 93.5 0.18 4E-06 50.2 6.5 53 172-230 77-131 (207)
106 TIGR02821 fghA_ester_D S-formy 93.4 0.15 3.2E-06 52.1 6.0 50 173-235 123-172 (275)
107 PF05728 UPF0227: Uncharacteri 93.4 0.35 7.5E-06 47.4 8.2 66 131-208 14-79 (187)
108 KOG1838 Alpha/beta hydrolase [ 93.4 0.31 6.7E-06 53.1 8.5 104 121-237 130-236 (409)
109 PRK10162 acetyl esterase; Prov 93.1 0.53 1.2E-05 49.3 9.8 91 133-235 99-194 (318)
110 KOG2624 Triglyceride lipase-ch 92.9 0.1 2.2E-06 57.0 4.1 93 137-241 98-202 (403)
111 PRK06765 homoserine O-acetyltr 92.9 0.16 3.5E-06 55.1 5.7 53 169-237 144-197 (389)
112 COG0596 MhpC Predicted hydrola 92.8 0.21 4.5E-06 46.4 5.6 37 188-237 88-124 (282)
113 COG3208 GrsT Predicted thioest 92.5 0.2 4.4E-06 50.9 5.3 25 187-211 73-97 (244)
114 PLN02934 triacylglycerol lipas 92.5 0.24 5.1E-06 55.3 6.3 67 173-244 305-372 (515)
115 PLN02442 S-formylglutathione h 92.4 0.31 6.6E-06 50.2 6.7 52 172-236 126-178 (283)
116 PLN02408 phospholipase A1 92.2 0.23 4.9E-06 53.6 5.6 46 189-242 201-246 (365)
117 PF06259 Abhydrolase_8: Alpha/ 92.0 0.33 7.1E-06 47.2 6.0 55 172-239 91-147 (177)
118 PF06342 DUF1057: Alpha/beta h 91.8 0.41 8.9E-06 49.9 6.7 80 133-235 50-136 (297)
119 COG3571 Predicted hydrolase of 91.1 0.91 2E-05 43.9 7.7 95 131-241 29-129 (213)
120 PF06057 VirJ: Bacterial virul 91.1 0.68 1.5E-05 45.7 7.1 92 135-241 19-112 (192)
121 PLN02310 triacylglycerol lipas 90.9 0.36 7.7E-06 52.7 5.5 64 169-241 189-253 (405)
122 COG1647 Esterase/lipase [Gener 90.8 1.6 3.5E-05 44.1 9.5 88 132-238 29-120 (243)
123 PLN02454 triacylglycerol lipas 90.8 0.43 9.4E-06 52.2 6.0 67 174-246 211-280 (414)
124 PLN02571 triacylglycerol lipas 90.8 0.43 9.3E-06 52.2 6.0 72 168-242 207-280 (413)
125 KOG2382 Predicted alpha/beta h 90.7 0.34 7.4E-06 51.1 5.0 37 171-208 105-142 (315)
126 COG0429 Predicted hydrolase of 90.7 0.86 1.9E-05 48.5 7.9 92 132-236 91-185 (345)
127 COG3319 Thioesterase domains o 90.5 1.3 2.9E-05 45.5 9.0 91 131-237 13-104 (257)
128 TIGR00976 /NonD putative hydro 90.3 0.43 9.3E-06 53.8 5.7 83 138-236 46-132 (550)
129 PF07224 Chlorophyllase: Chlor 90.1 0.61 1.3E-05 48.2 5.9 111 113-241 43-161 (307)
130 PF00756 Esterase: Putative es 90.0 0.33 7.2E-06 48.0 4.0 50 173-235 100-149 (251)
131 PF00151 Lipase: Lipase; Inte 89.1 0.87 1.9E-05 48.4 6.6 53 173-236 132-189 (331)
132 PLN02802 triacylglycerol lipas 89.1 0.59 1.3E-05 52.2 5.4 50 189-246 331-380 (509)
133 KOG1552 Predicted alpha/beta h 88.9 1.3 2.9E-05 45.4 7.4 67 153-236 91-162 (258)
134 PRK10439 enterobactin/ferric e 88.4 2.2 4.7E-05 46.8 9.2 87 135-236 227-323 (411)
135 PF12740 Chlorophyllase2: Chlo 88.2 2.3 5E-05 43.9 8.6 109 113-238 14-132 (259)
136 PF02230 Abhydrolase_2: Phosph 87.9 1.1 2.4E-05 43.9 6.0 57 168-237 83-141 (216)
137 smart00824 PKS_TE Thioesterase 87.9 2.2 4.7E-05 39.8 7.8 38 187-234 63-100 (212)
138 KOG4372 Predicted alpha/beta h 87.1 0.13 2.8E-06 55.7 -1.2 46 188-239 150-197 (405)
139 PLN03037 lipase class 3 family 85.3 1.4 3E-05 49.5 5.5 64 170-242 299-364 (525)
140 PF12048 DUF3530: Protein of u 84.8 2.4 5.1E-05 44.7 6.9 114 99-236 81-229 (310)
141 PF08237 PE-PPE: PE-PPE domain 84.0 2.6 5.7E-05 42.4 6.5 57 172-236 33-89 (225)
142 PLN02324 triacylglycerol lipas 83.9 1.5 3.2E-05 48.1 5.0 72 169-241 197-269 (415)
143 PLN02719 triacylglycerol lipas 83.1 1.7 3.7E-05 48.7 5.1 54 189-244 299-352 (518)
144 KOG1515 Arylacetamide deacetyl 82.6 7.3 0.00016 41.7 9.5 100 130-240 107-211 (336)
145 PRK04940 hypothetical protein; 82.5 1.9 4.1E-05 42.2 4.6 38 172-209 43-81 (180)
146 COG0657 Aes Esterase/lipase [L 82.2 6.3 0.00014 40.7 8.7 90 116-210 80-174 (312)
147 PLN02847 triacylglycerol lipas 81.8 1.4 3E-05 50.2 3.9 34 173-206 235-269 (633)
148 COG4757 Predicted alpha/beta h 80.1 2.4 5.3E-05 43.3 4.5 67 132-203 44-120 (281)
149 PRK10252 entF enterobactin syn 79.7 5.9 0.00013 48.8 8.7 90 130-234 1080-1169(1296)
150 PLN02761 lipase class 3 family 79.6 2.8 6.1E-05 47.2 5.3 52 189-242 295-347 (527)
151 PLN02753 triacylglycerol lipas 78.4 4 8.7E-05 46.0 6.0 52 188-242 312-364 (531)
152 PTZ00472 serine carboxypeptida 77.6 4.7 0.0001 44.8 6.4 41 170-210 149-193 (462)
153 KOG4569 Predicted lipase [Lipi 77.5 3.9 8.5E-05 43.5 5.5 57 171-238 157-214 (336)
154 COG0412 Dienelactone hydrolase 77.4 8.8 0.00019 38.7 7.7 77 132-208 41-132 (236)
155 PF08840 BAAT_C: BAAT / Acyl-C 77.4 2.6 5.5E-05 41.8 3.8 52 171-236 5-56 (213)
156 KOG4627 Kynurenine formamidase 72.6 5.1 0.00011 40.3 4.4 98 137-254 89-188 (270)
157 PF09752 DUF2048: Uncharacteri 68.7 8.6 0.00019 41.3 5.4 66 138-203 114-190 (348)
158 KOG2385 Uncharacterized conser 68.5 9.5 0.00021 42.9 5.8 56 187-250 445-504 (633)
159 PF01738 DLH: Dienelactone hyd 66.9 16 0.00034 35.5 6.6 85 132-234 28-130 (218)
160 KOG4540 Putative lipase essent 65.1 7.4 0.00016 40.9 3.9 39 165-203 252-291 (425)
161 COG5153 CVT17 Putative lipase 65.1 7.4 0.00016 40.9 3.9 39 165-203 252-291 (425)
162 PF10503 Esterase_phd: Esteras 63.4 12 0.00027 37.6 5.1 53 174-239 80-135 (220)
163 KOG3967 Uncharacterized conser 62.6 9.2 0.0002 38.7 3.9 43 188-242 190-232 (297)
164 PF06500 DUF1100: Alpha/beta h 61.5 7.2 0.00016 42.9 3.3 88 134-236 207-296 (411)
165 PF12146 Hydrolase_4: Putative 60.5 13 0.00028 31.2 3.9 49 131-180 29-79 (79)
166 COG4188 Predicted dienelactone 59.1 23 0.00049 38.4 6.4 19 188-206 159-177 (365)
167 PF10340 DUF2424: Protein of u 58.2 22 0.00049 38.6 6.3 59 171-238 174-236 (374)
168 COG2945 Predicted hydrolase of 57.6 29 0.00063 34.6 6.4 84 133-237 48-138 (210)
169 COG0400 Predicted esterase [Ge 57.1 21 0.00046 35.6 5.5 38 172-209 80-120 (207)
170 COG2021 MET2 Homoserine acetyl 54.4 22 0.00048 38.5 5.4 46 185-243 142-189 (368)
171 KOG3975 Uncharacterized conser 48.6 33 0.00072 35.6 5.3 49 173-232 93-143 (301)
172 PF00300 His_Phos_1: Histidine 47.8 25 0.00055 31.6 4.1 40 155-196 111-152 (158)
173 COG1506 DAP2 Dipeptidyl aminop 47.5 38 0.00082 39.1 6.3 78 129-208 407-493 (620)
174 COG3741 HutG N-formylglutamate 46.6 15 0.00032 38.1 2.5 37 169-205 127-163 (272)
175 KOG3101 Esterase D [General fu 45.2 10 0.00022 38.5 1.0 36 189-235 142-178 (283)
176 COG0627 Predicted esterase [Ge 44.5 26 0.00056 37.3 4.1 35 173-207 135-171 (316)
177 PF03403 PAF-AH_p_II: Platelet 37.1 30 0.00065 37.5 3.2 33 189-236 229-261 (379)
178 TIGR02017 hutG_amidohyd N-form 35.3 42 0.0009 34.7 3.8 32 169-200 121-152 (263)
179 PF07819 PGAP1: PGAP1-like pro 34.4 24 0.00052 35.3 1.9 16 40-55 3-18 (225)
180 PF04083 Abhydro_lipase: Parti 32.8 30 0.00065 28.0 1.8 18 37-54 39-56 (63)
181 PF05013 FGase: N-formylglutam 32.1 51 0.0011 32.8 3.7 31 169-199 113-143 (222)
182 cd00286 Tubulin_FtsZ Tubulin/F 32.0 1.3E+02 0.0029 31.6 7.0 37 170-210 74-115 (328)
183 PRK03482 phosphoglycerate muta 31.7 1.3E+02 0.0027 29.4 6.5 49 155-208 111-160 (215)
184 PF05677 DUF818: Chlamydia CHL 31.4 55 0.0012 35.4 4.0 40 169-208 192-235 (365)
185 cd00312 Esterase_lipase Estera 29.4 38 0.00083 37.3 2.6 37 189-236 177-213 (493)
186 PF02879 PGM_PMM_II: Phosphogl 28.9 48 0.001 28.6 2.6 41 170-210 2-45 (104)
187 COG3946 VirJ Type IV secretory 28.7 1.6E+02 0.0034 32.8 6.8 72 133-209 275-347 (456)
188 PF11144 DUF2920: Protein of u 28.5 99 0.0021 34.1 5.4 32 173-204 168-200 (403)
189 PRK13462 acid phosphatase; Pro 28.1 1.4E+02 0.0031 29.1 6.1 41 165-208 116-157 (203)
190 KOG3253 Predicted alpha/beta h 28.0 1E+02 0.0023 35.8 5.6 43 187-241 249-291 (784)
191 PRK05371 x-prolyl-dipeptidyl a 27.4 1.6E+02 0.0034 35.2 7.2 82 136-235 270-372 (767)
192 PF00135 COesterase: Carboxyle 26.5 99 0.0021 33.9 5.2 46 179-235 196-244 (535)
193 PF04301 DUF452: Protein of un 26.4 58 0.0013 32.7 3.0 20 188-207 57-76 (213)
194 PF00091 Tubulin: Tubulin/FtsZ 26.0 99 0.0022 30.5 4.6 40 171-210 106-150 (216)
195 PF05577 Peptidase_S28: Serine 25.8 1.8E+02 0.0038 31.7 6.9 56 169-237 90-149 (434)
196 COG2382 Fes Enterochelin ester 25.3 89 0.0019 33.1 4.2 69 136-207 117-196 (299)
197 PF03959 FSH1: Serine hydrolas 24.1 1.2E+02 0.0026 29.7 4.8 47 189-240 102-149 (212)
198 PF12715 Abhydrolase_7: Abhydr 23.9 87 0.0019 34.4 3.9 32 188-233 226-257 (390)
199 TIGR03162 ribazole_cobC alpha- 23.6 95 0.0021 29.0 3.8 40 166-208 115-155 (177)
200 KOG1551 Uncharacterized conser 23.0 1.3E+02 0.0029 31.7 4.8 50 154-203 150-210 (371)
201 PRK10115 protease 2; Provision 22.7 54 0.0012 38.5 2.2 79 129-208 458-544 (686)
202 smart00855 PGAM Phosphoglycera 21.5 1.6E+02 0.0034 26.9 4.7 32 166-197 116-150 (155)
203 PF05448 AXE1: Acetyl xylan es 20.9 1.5E+02 0.0033 31.4 5.0 57 173-244 157-216 (320)
204 PF02129 Peptidase_S15: X-Pro 20.9 91 0.002 31.5 3.3 78 140-236 52-136 (272)
No 1
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=100.00 E-value=9.6e-83 Score=689.62 Aligned_cols=466 Identities=23% Similarity=0.375 Sum_probs=335.7
Q ss_pred CCCCCceEEEeCCcccccceeccccCCCCCCCCCCCCcccccch-hhhhccccccccccccccCCCCCCCCcccCCCCCC
Q 008645 37 GDYPKLSGIIIPGFASTQLRAWSILDCPYSPLDFNPLDLVWLDT-TKLLSAVNCWLKCMTLDPYNQTDNPECKSRPDSGL 115 (558)
Q Consensus 37 ~~~~k~PVILVPGi~GS~Lea~~~l~c~~~~~~~~~~~~lWln~-~~ll~~~~Cw~d~m~L~~~n~~~~pGv~irP~~G~ 115 (558)
|..+||||||||||++|+||+|....|+.. .| ++|||++. ..++...+||+++|+||+.++.++|||+|||..|+
T Consensus 70 g~~~khPVVlVPGiiStgLE~W~~~~C~~~--~f--rkRlWg~~~~~~~~~~~CWld~m~LD~~Tg~dppGVkIRa~~G~ 145 (642)
T PLN02517 70 GLTAKHPVVFVPGIVTGGLELWEGHQCAEG--LF--RKRLWGGTFGEVYKRPLCWVEHMSLDNETGLDPPGIRVRAVSGL 145 (642)
T ss_pred CCCcCCCEEEeCchhhcchhhccCcccccc--hh--hhccccchhhheecCHHHHHHhceeCCCCCCCCCCeEEEecCCh
Confidence 788999999999999999999998778753 23 36999963 44555678999999999888899999999998999
Q ss_pred cccccccCCCcccchhhHHHHHHHHHHHcCCccccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcC-CcEEEEE
Q 008645 116 SAITELDPGYITGPLSSVWKEWVKWCIEFGIEANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRG-GPSLVLA 194 (558)
Q Consensus 116 ~aie~Ldp~~~~~~~~~~y~~li~~L~~~GY~~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g-~~VvLIa 194 (558)
+|+++|+|+|+ +|++||++|+++||++++|++||||||+++..+|++++||.+||++||.+++.+| +||+|||
T Consensus 146 ~AvD~f~pgY~------vw~kLIe~L~~iGY~~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~ 219 (642)
T PLN02517 146 VAADYFAPGYF------VWAVLIANLARIGYEEKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVP 219 (642)
T ss_pred heehhccccce------eHHHHHHHHHHcCCCCCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 99999999986 7899999999999999999999999999998899999999999999999999884 6999999
Q ss_pred eCCCcHHHHHHHHHhhcc--CCCccchhhhhhhhceEEEecCCCCCchhhhhhhhcCCCCCCC---------Cc----h-
Q 008645 195 HSLGNNVFRYFLEWLKLE--IPPKQYIKWLDEHIHAYFAVGSPFLGATQSVKATLSGETSGLP---------VS----E- 258 (558)
Q Consensus 195 HSMGGlva~~fL~~~~~~--~~~~~~~~Wkdk~I~~~I~lg~P~~Gs~~al~~llsG~~~glp---------i~----~- 258 (558)
|||||+++++||+|++.+ .++++.++|++|||+++|+||+||+|++|++++++||++.+++ +. +
T Consensus 220 HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lGs~Kav~allSGE~kdt~~l~a~~~~~l~~~~~r~ 299 (642)
T PLN02517 220 HSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLGVPKAVSGLFSAEAKDIAVARAIAPGVLDSDLFGL 299 (642)
T ss_pred eCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccccCCcHHHHHHHhccccccchhhcchhhhhhhhhhhcc
Confidence 999999999999997532 2334579999999999999999999999999999999987765 11 1
Q ss_pred ---HHHHHHHhhcCccccccCCcccccCCCcccccccCCCccCC--------Cccccchhhh--ccCC----CCCCCcee
Q 008645 259 ---GTARLMFNSFGSSLWMMPFSKYCRADNKYWKHFSGGTRKDH--------HIHQCDEQEF--RSNY----SGWPTNLI 321 (558)
Q Consensus 259 ---~~~r~~~rs~pS~~~LLP~~~~~~~~~~~Wg~~~~~~~~~~--------~~~~~~~~~~--~~~~----~~w~~~~v 321 (558)
....+|.|||+|+++|||.. |+++|||...++.+.. .++++..... +.+. ..=-.+++
T Consensus 300 ~~~~~~~~~~Rs~~si~sMlPkG-----G~~iWgn~~~apdd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i 374 (642)
T PLN02517 300 QTLQHVMRMTRTWDSTMSMLPKG-----GETIWGDLDWSPEEGYNCDGKKQKNNDTQLANQDNGNSDVKQKEPVNYGRII 374 (642)
T ss_pred hhhHHHHHHHhhhcchHHhccCC-----cccccCCCCCCCCcccccccccccCccccccccccccccccccccccccceE
Confidence 12226999999999999986 6788887554444421 1111111000 0000 00002344
Q ss_pred EEecCCc----ccccCCCCccccccCCcc-ccccCCC----------------cccccccccccccchhhhcc--ccChh
Q 008645 322 NIEIPSI----RGLEAYPSVSEVAHNNFS-SIECGLP----------------TQLSFSAREISDGTFFKAIE--DYDPE 378 (558)
Q Consensus 322 ~v~tp~~----~~~~~~~~~~~~~~~n~~-~~~~~~~----------------~~~~yta~di~~g~~f~~i~--~~~~~ 378 (558)
.+..+.. ..++.+........+|.+ +..|... ..++||+.+..+ ++.... .+..-
T Consensus 375 ~f~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~--~l~~~~p~~~~r~ 452 (642)
T PLN02517 375 SFGKDVAEAPSSQIERIDFKDAVKGNSVASNTSCGDVWTEYHEMGREGIKAVAEYKVYTAGSVLD--LLRFVAPKMMQRG 452 (642)
T ss_pred EeccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccCCCHHHHHH--HHHhcCHHHHHHh
Confidence 4433221 001111111111111211 1122211 146788876665 333221 10000
Q ss_pred HHHHHHH------HhhhcCCCCCCCCCC-CCCCCCcceEEEEecCCCCCceeEEeCCCCCCCCCCccccceeeeeccccc
Q 008645 379 SKRLLHL------LEKSYHGDPVLNPLT-PWDRPPIKNIFCIYGIDSKTEVGYYFAPSGKPYPDNWIITDVIYEIEGSLF 451 (558)
Q Consensus 379 ~~~~~~~------~~~~~~~~p~~npl~-~~~~pP~v~v~CiYGvgv~T~~~y~Y~~~~~~~pd~~~~~~~~ye~~~s~~ 451 (558)
.....+. ..++.....|.|||+ +||+||+|+|||+||||+||||+|+|+.+..+ ..++.|.+|.++.
T Consensus 453 ~~~~s~Gia~~~~~~~~~~~~~W~NPLe~~LP~AP~mkIyC~YGVG~PTERaY~Y~~~~~~------~~~l~~~iD~~~~ 526 (642)
T PLN02517 453 DAHFSYGIADNLDDPKYQHYKYWSNPLETKLPNAPEMEIYSLYGVGIPTERSYVYKLSPSD------ECSIPFQIDTSAD 526 (642)
T ss_pred hccccccccccccccccccccccCChhhccCCCCCCceEEEEecCCCCccceeeeccCCcc------cccCceEEecccC
Confidence 0000000 111222235999998 89999999999999999999999999865221 1456788887775
Q ss_pred cCC-CceecCCCCCCCCCcccccccHHH-Hcc-cCC-CceeeeeCC----CCCcCCCCccee-ccccccCCcccCCCCCC
Q 008645 452 SRS-GNLVEGNPGPTSGDETVPYHSLSW-CKN-WLG-PKVNITRAP----QSEHDGSDMQVE-LNVEHQEEADIVPNMTR 522 (558)
Q Consensus 452 ~~~-~~~~~g~~~~gdGDGTVpl~SL~~-C~~-W~~-~~v~~~~~p----~~~H~~~~~~~~-~~~~~~~~~di~~n~~~ 522 (558)
... -..+.++|.++||||||||.||++ |++ |++ .++|+..++ ...|.+.....+ +|+++++|||||||..+
T Consensus 527 ~~~~~~~v~~GV~~~dGDgTVpllS~g~MC~kgW~~~~r~NPag~~v~i~E~~H~P~~~~~~grG~~sg~HVDIlG~~~l 606 (642)
T PLN02517 527 GGDEDSCLKGGVYFVDGDETVPVLSAGFMCAKGWRGKTRFNPSGIRTYIREYQHSPPANLLEGRGTQSGAHVDIMGNFAL 606 (642)
T ss_pred CCcccccccCceEEecCCCceeehhhhhhhhhhhccCCccCCCCCeeEEEEccCCCcccccCCCCCCccchhhhcccHHH
Confidence 432 124567788999999999999995 966 987 688888888 467888755555 49999999999999975
Q ss_pred CCc
Q 008645 523 SPR 525 (558)
Q Consensus 523 ~~~ 525 (558)
...
T Consensus 607 ~e~ 609 (642)
T PLN02517 607 IED 609 (642)
T ss_pred HHH
Confidence 443
No 2
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=100.00 E-value=1.9e-70 Score=579.69 Aligned_cols=386 Identities=32% Similarity=0.584 Sum_probs=301.8
Q ss_pred eEEEeCCcccccceeccccC-CCCCCCCC------CCCcc--cccchhhhhc-ccccccc--ccccccCCCCCCCCcccC
Q 008645 43 SGIIIPGFASTQLRAWSILD-CPYSPLDF------NPLDL--VWLDTTKLLS-AVNCWLK--CMTLDPYNQTDNPECKSR 110 (558)
Q Consensus 43 PVILVPGi~GS~Lea~~~l~-c~~~~~~~------~~~~~--lWln~~~ll~-~~~Cw~d--~m~L~~~n~~~~pGv~ir 110 (558)
||++|||++|++|++ +++ .|....-| ..+|| ||+++..+++ .++||++ +|.||+++++++|||++|
T Consensus 32 pv~lv~g~gg~~l~~--v~~~~p~vv~~W~~~~~a~~~FrkrLW~~~~~l~~~~~~cw~~~~~lvld~~tGLd~pg~~lR 109 (473)
T KOG2369|consen 32 PVLLVPGDGGSQLHP--VLDGKPGVVRLWVCIKCAEGYFRKRLWLDLNMLLPKTIDCWCDNEHLVLDPETGLDPPGVKLR 109 (473)
T ss_pred ceEEecCCccccccc--eecCCCCEEEEEEeecCchHHHhHHHhhhccccccccccccccceEEeecCccCCCCCcceee
Confidence 999999999999999 555 45433211 13344 9999999998 7999999 667788899999999999
Q ss_pred CCCCCcccccccCCCcccchhhHHHHHHHHHHHcCCc-cccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcC-C
Q 008645 111 PDSGLSAITELDPGYITGPLSSVWKEWVKWCIEFGIE-ANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRG-G 188 (558)
Q Consensus 111 P~~G~~aie~Ldp~~~~~~~~~~y~~li~~L~~~GY~-~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g-~ 188 (558)
+.|++|++||||+|+ +|++||++|+.+||+ +++|++||||||+++..+|++|+|+.+||.+||.+|+.+| +
T Consensus 110 -vpgf~s~~~ld~~y~------~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~~e~rd~yl~kLK~~iE~~~~~~G~k 182 (473)
T KOG2369|consen 110 -VPGFESLDYLDPGYW------YWHELIENLVGIGYERGKTLFGAPYDWRLSYHNSEERDQYLSKLKKKIETMYKLNGGK 182 (473)
T ss_pred -cCCceeeecccchhH------HHHHHHHHHHhhCcccCceeeccccchhhccCChhHHHHHHHHHHHHHHHHHHHcCCC
Confidence 445699999999994 999999999999997 8999999999999999999999999999999999999998 7
Q ss_pred cEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCCCchhhhhhhhcC--CCCCCC-CchHHHHHHH
Q 008645 189 PSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGATQSVKATLSG--ETSGLP-VSEGTARLMF 265 (558)
Q Consensus 189 ~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs~~al~~llsG--~~~glp-i~~~~~r~~~ 265 (558)
||+||+|||||++++|||+|++.+ .+.|+++||++||.||+||+|++++++.++|| ++.+.+ +.+..+|.++
T Consensus 183 kVvlisHSMG~l~~lyFl~w~~~~-----~~~W~~k~I~sfvnig~p~lG~~k~v~~l~Sge~d~~~~~~~~~~~lr~~~ 257 (473)
T KOG2369|consen 183 KVVLISHSMGGLYVLYFLKWVEAE-----GPAWCDKYIKSFVNIGAPWLGSPKAVKLLASGEKDNNGDPSLAPFKLREEQ 257 (473)
T ss_pred ceEEEecCCccHHHHHHHhccccc-----chhHHHHHHHHHHccCchhcCChHHHhHhhccccccCcccccchhhhhhhc
Confidence 999999999999999999998643 26999999999999999999999999999999 555554 3556788888
Q ss_pred hhc-Ccccc---ccCCcccccCCCcccccccCCCccCCCccccchhhhccCCCCCCCce--eEEecCCcccccCCCCccc
Q 008645 266 NSF-GSSLW---MMPFSKYCRADNKYWKHFSGGTRKDHHIHQCDEQEFRSNYSGWPTNL--INIEIPSIRGLEAYPSVSE 339 (558)
Q Consensus 266 rs~-pS~~~---LLP~~~~~~~~~~~Wg~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~--v~v~tp~~~~~~~~~~~~~ 339 (558)
|++ -+..| |||+.. ...+| .+.+ +.+.+|.
T Consensus 258 ~~~~~ts~w~~sllpk~e----~~~~f----------------------------~~~~~~~~~~~~~------------ 293 (473)
T KOG2369|consen 258 RSMRMTSFWISSLLPKGE----CIDFF----------------------------TEREDMILLSTPE------------ 293 (473)
T ss_pred ccccccccchhhcccCCc----ccccc----------------------------ccchhhhhccchh------------
Confidence 888 67777 999741 01233 3333 4555554
Q ss_pred cccCCccccccCCCccccccc---ccccccchhh--hccccChhHHHHHHHHhhhcCCCCCCCCC-CCCCCCCcceEEEE
Q 008645 340 VAHNNFSSIECGLPTQLSFSA---REISDGTFFK--AIEDYDPESKRLLHLLEKSYHGDPVLNPL-TPWDRPPIKNIFCI 413 (558)
Q Consensus 340 ~~~~n~~~~~~~~~~~~~yta---~di~~g~~f~--~i~~~~~~~~~~~~~~~~~~~~~p~~npl-~~~~~pP~v~v~Ci 413 (558)
++||+ .|+.. ||. ++.+... +.+..-+.||+ +.++.||+|+||||
T Consensus 294 ----------------~~yt~~~~~d~~~--ffa~~~~~f~~g-----------~~~~~~~~~~~lt~~~~aP~v~vyCi 344 (473)
T KOG2369|consen 294 ----------------KNYTAGELNDLKL--FFAPKDIHFSAG-----------NLWPKYWVNPLLTKLPMAPGVEVYCI 344 (473)
T ss_pred ----------------hhhcccchhhhHh--hcchhhhhhhcC-----------CcchhcccCcccccccCCCCceEEEe
Confidence 47777 55554 555 4444221 01122233333 47899999999999
Q ss_pred ecCCCCCceeEEeCCCCCCCCCCccccceeeeeccccccCCCceecCCCCCCCCCcccccccHHHHcccCCCceeeeeCC
Q 008645 414 YGIDSKTEVGYYFAPSGKPYPDNWIITDVIYEIEGSLFSRSGNLVEGNPGPTSGDETVPYHSLSWCKNWLGPKVNITRAP 493 (558)
Q Consensus 414 YGvgv~T~~~y~Y~~~~~~~pd~~~~~~~~ye~~~s~~~~~~~~~~g~~~~gdGDGTVpl~SL~~C~~W~~~~v~~~~~p 493 (558)
||+|+|||++|+|+.+.++||+. +++.+ + ++|+..++|||||||+.|+.+|++|++.++|...+-
T Consensus 345 YGvgvpTe~~y~y~~~~~~f~~~-----------~~~~~--~--~~~~~~~~DGDgTVp~~S~~~c~~w~g~~~~~~~~~ 409 (473)
T KOG2369|consen 345 YGVGVPTERAYYYGLETSPFPDR-----------GSLVD--G--LKGGIFYGDGDGTVPLVSASMCANWQGKQFNAGIAV 409 (473)
T ss_pred ccCCCCCcceeEeccCCCCCCcc-----------cchhc--c--ccCceeecCCCCccchHHHHhhhhhhcccccccccc
Confidence 99999999999999876666552 33332 1 455667899999999999999999999986632221
Q ss_pred ---CCCcCCCCcceeccccccCCcccCCCCCCCCceeEEE
Q 008645 494 ---QSEHDGSDMQVELNVEHQEEADIVPNMTRSPRVKYIT 530 (558)
Q Consensus 494 ---~~~H~~~~~~~~~~~~~~~~~di~~n~~~~~~~~~~~ 530 (558)
.-.|.+..+.++.|+++.+|+|||+|-.+...+..++
T Consensus 410 ~~~~~~~~~~~~~~~~G~~~a~Hv~ilg~~~l~e~i~k~~ 449 (473)
T KOG2369|consen 410 TREEDKHQPVNLDESHGSSSAEHVDILGDEELLEEILKVL 449 (473)
T ss_pred ccccccCCCccccccCCccchhhhhhccChHHHHHHHHHh
Confidence 1235556799999999999999999986444443333
No 3
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=100.00 E-value=5e-67 Score=557.89 Aligned_cols=366 Identities=34% Similarity=0.633 Sum_probs=280.3
Q ss_pred cccccchhhhhc-cccccccccccccCCCC-----CCCCcccC-CCCC-CcccccccCCCcccchhhHHHHHHHHHHHcC
Q 008645 74 DLVWLDTTKLLS-AVNCWLKCMTLDPYNQT-----DNPECKSR-PDSG-LSAITELDPGYITGPLSSVWKEWVKWCIEFG 145 (558)
Q Consensus 74 ~~lWln~~~ll~-~~~Cw~d~m~L~~~n~~-----~~pGv~ir-P~~G-~~aie~Ldp~~~~~~~~~~y~~li~~L~~~G 145 (558)
|+||+|++.+++ ..+||+++|+|. ||+. +.|||+|| |+|| +++|++|||.++.+.. +|++||+.|++.|
T Consensus 2 ~~~W~~~~~~~~~~~~c~~~~~~l~-~d~~~~~~~~~~gv~i~~~~~g~~~~i~~ld~~~~~~~~--~~~~li~~L~~~G 78 (389)
T PF02450_consen 2 FELWLNLELFIPRVWDCFFDNMRLV-YDPKTWHYSNDPGVEIRVPGFGGTSGIEYLDPSFITGYW--YFAKLIENLEKLG 78 (389)
T ss_pred ccccCCCcccccccCCcccccceEE-EcCCCCceecCCCceeecCCCCceeeeeecccccccccc--hHHHHHHHHHhcC
Confidence 689999998887 689999999997 6653 35899998 7999 8999999998876554 9999999999999
Q ss_pred Cc-cccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhh
Q 008645 146 IE-ANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDE 224 (558)
Q Consensus 146 Y~-~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk 224 (558)
|+ +.+|++||||||+++. ++++|+++||++||++++.+++||+||||||||+++++||+++.. +.|+++
T Consensus 79 Y~~~~~l~~~pYDWR~~~~---~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~~~-------~~W~~~ 148 (389)
T PF02450_consen 79 YDRGKDLFAAPYDWRLSPA---ERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWMPQ-------EEWKDK 148 (389)
T ss_pred cccCCEEEEEeechhhchh---hHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhccc-------hhhHHh
Confidence 95 6799999999999988 568899999999999999998899999999999999999998641 339999
Q ss_pred hhceEEEecCCCCCchhhhhhhhcCCCCCCCC-chHHHH------HHHhhcCcccc-ccCCcccccCCCcccccccCCCc
Q 008645 225 HIHAYFAVGSPFLGATQSVKATLSGETSGLPV-SEGTAR------LMFNSFGSSLW-MMPFSKYCRADNKYWKHFSGGTR 296 (558)
Q Consensus 225 ~I~~~I~lg~P~~Gs~~al~~llsG~~~glpi-~~~~~r------~~~rs~pS~~~-LLP~~~~~~~~~~~Wg~~~~~~~ 296 (558)
||+++|+||+||+||++|++.+++|++.++++ ....+| .++|+++|..| |||+++ ...|++
T Consensus 149 ~i~~~i~i~~p~~Gs~~a~~~~~sG~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~llp~~~-----~~~~~~------ 217 (389)
T PF02450_consen 149 YIKRFISIGTPFGGSPKALRALLSGDNEGIPFLSPLSLRSLESFPSVQRLLPSRTWGLLPSGG-----DKIWGN------ 217 (389)
T ss_pred hhhEEEEeCCCCCCChHHHHHHhhhhhhhhhhhhhHHHhHhhhchhhheecccccceeccCcc-----ccccCC------
Confidence 99999999999999999999999999998874 555666 78888888888 999873 456653
Q ss_pred cCCCccccchhhhccCCCCCC--CceeEEecCCcccccCCCCccccccCCccccccCCCcccccccccccccchhhhccc
Q 008645 297 KDHHIHQCDEQEFRSNYSGWP--TNLINIEIPSIRGLEAYPSVSEVAHNNFSSIECGLPTQLSFSAREISDGTFFKAIED 374 (558)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~w~--~~~v~v~tp~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~yta~di~~g~~f~~i~~ 374 (558)
.|+ .+++.+.|++....- +. .......+||+.|+.+ +|++++.
T Consensus 218 ------------------~~~~~~d~v~~~~~~~~~~~-----------~~----~~~~~~~nyt~~d~~~--~~~d~~~ 262 (389)
T PF02450_consen 218 ------------------FWPSQEDEVLITTPSRGKFI-----------NF----KSIPSSSNYTADDIEE--FFKDIGF 262 (389)
T ss_pred ------------------cCcCcccccccccccccccc-----------cc----cccccccceeHHHHHH--hhhhcCh
Confidence 233 566777666541100 00 1122446999999987 9999886
Q ss_pred cChhHH--HHHHHHhhhcCCCCCCCCCC-CCCCCCcceEEEEecCCCCCceeEEeCCCCCCCCCCccccceeeeeccccc
Q 008645 375 YDPESK--RLLHLLEKSYHGDPVLNPLT-PWDRPPIKNIFCIYGIDSKTEVGYYFAPSGKPYPDNWIITDVIYEIEGSLF 451 (558)
Q Consensus 375 ~~~~~~--~~~~~~~~~~~~~p~~npl~-~~~~pP~v~v~CiYGvgv~T~~~y~Y~~~~~~~pd~~~~~~~~ye~~~s~~ 451 (558)
...... .........-..+.+.+||+ +++ ||+|+||||||+|+|||++|+|.+. +++|.+.|..++..
T Consensus 263 ~~~~~~~~s~~~~~~~~e~~~~~~~pL~~~lp-aP~v~iyCiYG~g~pTe~~y~Y~~~----~~~~~i~d~~~~~~---- 333 (389)
T PF02450_consen 263 PSGQKPSYSFWEMYKDKEYYKYWSNPLETNLP-APGVKIYCIYGVGVPTERSYYYKQS----PDNWPIFDSSFPDQ---- 333 (389)
T ss_pred hhhcccchhhhhhhhcccccccccccccccCC-CCCceEEEeCCCCCCCcceEEEecC----CCcccccCCcccCC----
Confidence 332110 00111111013457788887 456 9999999999999999999999854 33343444444432
Q ss_pred cCCCceecCCCCCCCCCcccccccHHHHcccCCCceeeeeCCCCCcCCCCcceeccccccCCcccCCCC
Q 008645 452 SRSGNLVEGNPGPTSGDETVPYHSLSWCKNWLGPKVNITRAPQSEHDGSDMQVELNVEHQEEADIVPNM 520 (558)
Q Consensus 452 ~~~~~~~~g~~~~gdGDGTVpl~SL~~C~~W~~~~v~~~~~p~~~H~~~~~~~~~~~~~~~~~di~~n~ 520 (558)
.+.. + ++.++|||||||++||++|++|++.++++..+ | .+..++ .+.+|+|||+|.
T Consensus 334 --~~~~-s-gv~~~dGDGTVPl~SL~~C~~W~~~~~~~~~v----h----~~~~~g-~s~~HvdILg~~ 389 (389)
T PF02450_consen 334 --PPTS-S-GVIYGDGDGTVPLRSLGMCKKWRGPQVNIEPV----H----LFPLRG-QSAEHVDILGSN 389 (389)
T ss_pred --Cccc-C-ceEECCCCChhhHHHHHHHHHhCCcccceeEC----C----CcCCCC-CCccHhHHhcCC
Confidence 1111 0 23368999999999999999999998773222 3 444444 899999999984
No 4
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=100.00 E-value=4.7e-55 Score=470.95 Aligned_cols=351 Identities=20% Similarity=0.260 Sum_probs=256.0
Q ss_pred CCCCCceEEEeCCcccccceeccccCCCCCCCCCCCCcccccchhhhhccccccccccccccCCCC-----CC-CCcccC
Q 008645 37 GDYPKLSGIIIPGFASTQLRAWSILDCPYSPLDFNPLDLVWLDTTKLLSAVNCWLKCMTLDPYNQT-----DN-PECKSR 110 (558)
Q Consensus 37 ~~~~k~PVILVPGi~GS~Lea~~~l~c~~~~~~~~~~~~lWln~~~ll~~~~Cw~d~m~L~~~n~~-----~~-pGv~ir 110 (558)
++..++|||||||++||+|+|. ... .. +.+++|+++... ..|+.++|.+. ||.. +. |||+++
T Consensus 15 ~~~~~~PViLvPG~~gS~L~a~--~~~--~~----~~~~~W~~l~~~---~~~~~~~l~~~-yd~~t~~~~~~~~gv~i~ 82 (440)
T PLN02733 15 VDPDLDPVLLVPGIGGSILNAV--DKD--GG----NEERVWVRIFAA---DHEFRKKLWSR-YDPKTGKTVSLDPKTEIV 82 (440)
T ss_pred CCCCCCcEEEeCCCCcceeEEe--ecC--CC----CccceeEEchhc---CHHHHHHhhhe-eCcccCceecCCCCceEE
Confidence 5677999999999999999994 211 11 236789887644 34667777775 5433 24 699987
Q ss_pred -CC--CCCcccccccCCCc-ccchhhHHHHHHHHHHHcCC-ccccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHh
Q 008645 111 -PD--SGLSAITELDPGYI-TGPLSSVWKEWVKWCIEFGI-EANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKL 185 (558)
Q Consensus 111 -P~--~G~~aie~Ldp~~~-~~~~~~~y~~li~~L~~~GY-~~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~ 185 (558)
|+ +|+++|++|||... ....+.+|++||+.|++.|| ++.||+|||||||++.. .++++++|+++||++++.
T Consensus 83 vp~~~~g~~~i~~ldp~~~~~~~~~~~~~~li~~L~~~GY~~~~dL~g~gYDwR~~~~----~~~~~~~Lk~lIe~~~~~ 158 (440)
T PLN02733 83 VPDDRYGLYAIDILDPDVIIRLDEVYYFHDMIEQLIKWGYKEGKTLFGFGYDFRQSNR----LPETMDGLKKKLETVYKA 158 (440)
T ss_pred cCCCCCCceeeEEecCccccCcchHHHHHHHHHHHHHcCCccCCCcccCCCCcccccc----HHHHHHHHHHHHHHHHHH
Confidence 85 67999999999863 23567899999999999999 46899999999998642 366899999999999988
Q ss_pred cC-CcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCCCchhh-hhhhhcCCCC-----CCC-Cc
Q 008645 186 RG-GPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGATQS-VKATLSGETS-----GLP-VS 257 (558)
Q Consensus 186 ~g-~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs~~a-l~~llsG~~~-----glp-i~ 257 (558)
++ +||+||||||||+++++||... ++|.+++|+++|+||+||.||+++ .+.+++|.+. +.+ ++
T Consensus 159 ~g~~kV~LVGHSMGGlva~~fl~~~---------p~~~~k~I~~~I~la~P~~Gs~~~i~~~l~~g~~~v~~~~~~~~~s 229 (440)
T PLN02733 159 SGGKKVNIISHSMGGLLVKCFMSLH---------SDVFEKYVNSWIAIAAPFQGAPGFITDSLLTGVSFVEGWESEFFVS 229 (440)
T ss_pred cCCCCEEEEEECHhHHHHHHHHHHC---------CHhHHhHhccEEEECCCCCCCchhHHHHHhcCchhhhhhhhhhccC
Confidence 75 5999999999999999999862 355589999999999999999999 5789999875 333 47
Q ss_pred hHHHHHHHhhcCccccccCCcccccCCCcc-cccccCCCccCCCccccchhhhccCCCCCCCceeEE------ecCCccc
Q 008645 258 EGTARLMFNSFGSSLWMMPFSKYCRADNKY-WKHFSGGTRKDHHIHQCDEQEFRSNYSGWPTNLINI------EIPSIRG 330 (558)
Q Consensus 258 ~~~~r~~~rs~pS~~~LLP~~~~~~~~~~~-Wg~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~v~v------~tp~~~~ 330 (558)
+..+|+++|++||+++|||++ .+ |+ +.+++ .+|+-.
T Consensus 230 ~~~~~~~~rs~~s~~~llP~~-------~~~w~-----------------------------~~~~~~~~~~~~~~~g~- 272 (440)
T PLN02733 230 KWSMHQLLIECPSIYELMANP-------DFKWE-----------------------------EPPELQVWRKKSDNDGN- 272 (440)
T ss_pred HHHHHHHHHhcccHHHHcCCC-------CCCCC-----------------------------CCceEEEeeeccCCCCc-
Confidence 888999999999999999998 33 53 22233 133310
Q ss_pred ccCCCCccccccCCccccccCCCcccccccccccccchhhhccccCh------------hHHHHH--HHHhhhcCCCCCC
Q 008645 331 LEAYPSVSEVAHNNFSSIECGLPTQLSFSAREISDGTFFKAIEDYDP------------ESKRLL--HLLEKSYHGDPVL 396 (558)
Q Consensus 331 ~~~~~~~~~~~~~n~~~~~~~~~~~~~yta~di~~g~~f~~i~~~~~------------~~~~~~--~~~~~~~~~~p~~ 396 (558)
.| -...+|++.|+.+ ||+++ +.+. ..++++ ++..+.++.
T Consensus 273 ------------~~--------~~~~~Y~~~d~~~--~~~~~-~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---- 325 (440)
T PLN02733 273 ------------SS--------VVLESYGPLESIE--VFEDA-LSNNTLNYDGEKIPLPFNFDILKWANETRRILS---- 325 (440)
T ss_pred ------------cc--------ccccccCHHHHHH--HHHHH-HhcCceecccccccCcchHHHHHHHHHhHhhhc----
Confidence 00 0124799999998 99985 2111 112221 122223222
Q ss_pred CCCCCCCCCCcceEEEEecCCCCCceeEEeCCCCCCCCCCccccceeeeeccccccCCCceecCCCCCCCCCcccccccH
Q 008645 397 NPLTPWDRPPIKNIFCIYGIDSKTEVGYYFAPSGKPYPDNWIITDVIYEIEGSLFSRSGNLVEGNPGPTSGDETVPYHSL 476 (558)
Q Consensus 397 npl~~~~~pP~v~v~CiYGvgv~T~~~y~Y~~~~~~~pd~~~~~~~~ye~~~s~~~~~~~~~~g~~~~gdGDGTVpl~SL 476 (558)
+...||+|++|||||+|++|+.++.|..+..++.|. . .+....|++++ +|||||||++|+
T Consensus 326 ----~~~~p~~V~~yciygsg~~T~~~~~y~~~~~~~~~~---~--------~~~~~~p~~~y-----~dGDGTV~~~S~ 385 (440)
T PLN02733 326 ----SAKLPKGVKFYNIYGTSLDTPFDVCYGSEKSPIEDL---S--------EILHTEPEYTY-----VDGDGTVPVESA 385 (440)
T ss_pred ----cCCCCCCceEEEEecCCCCCcceEEecCCCCcccch---h--------hhcccCceEEE-----eCCCCEEecchh
Confidence 235899999999999999999999998553232221 0 11113466665 799999999999
Q ss_pred HHHcccCCCceeeeeCCCCCcCCC
Q 008645 477 SWCKNWLGPKVNITRAPQSEHDGS 500 (558)
Q Consensus 477 ~~C~~W~~~~v~~~~~p~~~H~~~ 500 (558)
.+|. |. .++...+| .+|.+.
T Consensus 386 ~~~~-~~--~~~~~~l~-~~H~~i 405 (440)
T PLN02733 386 KADG-LN--AVARVGVP-GDHRGI 405 (440)
T ss_pred hccC-cc--ccccccCC-chHHHH
Confidence 9996 73 24445556 777653
No 5
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.82 E-value=8.1e-09 Score=102.93 Aligned_cols=110 Identities=15% Similarity=0.197 Sum_probs=70.9
Q ss_pred hHHHHHHHHHHHcCCccccceeecCCCCCCCchhhh---hhHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHHHH
Q 008645 132 SVWKEWVKWCIEFGIEANSIIAAPYDWRLSPSKLEE---RDLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFLEW 208 (558)
Q Consensus 132 ~~y~~li~~L~~~GY~~~~L~gapYDWRls~~~~e~---~d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL~~ 208 (558)
..|..+++.|.+.||....|++.-|.-+........ .-++..+|+++|++.++.+|.||.||||||||+++|++++.
T Consensus 16 ~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGakVDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 16 SNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGAKVDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp GGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT--EEEEEETCHHHHHHHHHHH
T ss_pred hCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCCEEEEEEcCCcCHHHHHHHHH
Confidence 467889999999999877899999987765222211 23456899999999999898899999999999999999987
Q ss_pred hhccCCCcc---chhhhhhhhceEEEecCCCCCchhhhh
Q 008645 209 LKLEIPPKQ---YIKWLDEHIHAYFAVGSPFLGATQSVK 244 (558)
Q Consensus 209 ~~~~~~~~~---~~~Wkdk~I~~~I~lg~P~~Gs~~al~ 244 (558)
.+.. ++. ...+ ...|..+|.|++|..|......
T Consensus 96 ~~~~--d~~~~lg~~~-~~~v~t~v~lag~n~G~~~~~~ 131 (219)
T PF01674_consen 96 GGGA--DKVVNLGPPL-TSKVGTFVGLAGANHGLTSCGL 131 (219)
T ss_dssp CTGG--GTEEE----G-GG-EEEEEEES--TT--CGHC-
T ss_pred cCCC--CcccCccccc-cccccccccccccccccccccc
Confidence 5310 000 0112 2468889999988888776644
No 6
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=98.73 E-value=3.2e-08 Score=102.79 Aligned_cols=95 Identities=21% Similarity=0.248 Sum_probs=76.3
Q ss_pred hHHHHHHHHHHHcCCc--cccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCcHHHHHHHHH
Q 008645 132 SVWKEWVKWCIEFGIE--ANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLR-GGPSLVLAHSLGNNVFRYFLEW 208 (558)
Q Consensus 132 ~~y~~li~~L~~~GY~--~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~-g~~VvLIaHSMGGlva~~fL~~ 208 (558)
.-|..+++.|...||+ ..|++|++..-|........+++|..+|+.+++.+.+.+ +.|++|+||||||+++..|+..
T Consensus 48 ~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~ 127 (298)
T COG2267 48 GRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLAR 127 (298)
T ss_pred HHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHh
Confidence 3688899999999996 468899988875333445568999999999999998754 5699999999999999999986
Q ss_pred hhccCCCccchhhhhhhhceEEEecCCCCCch
Q 008645 209 LKLEIPPKQYIKWLDEHIHAYFAVGSPFLGAT 240 (558)
Q Consensus 209 ~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs~ 240 (558)
.. .+|+++| |++|+.+..
T Consensus 128 ~~-------------~~i~~~v-LssP~~~l~ 145 (298)
T COG2267 128 YP-------------PRIDGLV-LSSPALGLG 145 (298)
T ss_pred CC-------------ccccEEE-EECccccCC
Confidence 42 4799999 557775544
No 7
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.66 E-value=4.6e-08 Score=97.76 Aligned_cols=69 Identities=16% Similarity=0.254 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHHH--hc-CCcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCCCchhhhhhh
Q 008645 170 LYFHKLKLTFETALK--LR-GGPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGATQSVKAT 246 (558)
Q Consensus 170 ~y~~~Lk~lIE~~~~--~~-g~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs~~al~~l 246 (558)
+|..+..+.|.+.++ .. ..+|+||||||||+++|.++.... .....|+.+|++|+|+.|++.+....
T Consensus 64 ~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~----------~~~~~v~~iitl~tPh~g~~~~~d~~ 133 (225)
T PF07819_consen 64 EFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPN----------YDPDSVKTIITLGTPHRGSPLAFDRS 133 (225)
T ss_pred HHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccc----------cccccEEEEEEEcCCCCCccccchHH
Confidence 344444444444441 11 348999999999999999987421 11247999999999999999886555
Q ss_pred hc
Q 008645 247 LS 248 (558)
Q Consensus 247 ls 248 (558)
+.
T Consensus 134 ~~ 135 (225)
T PF07819_consen 134 LD 135 (225)
T ss_pred HH
Confidence 43
No 8
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=98.60 E-value=1.1e-07 Score=99.71 Aligned_cols=98 Identities=13% Similarity=0.097 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHcCCc--cccceeecCCCCC--CCchhhhhhHHHHHHHHHHHHHHH-------------------hc--C
Q 008645 133 VWKEWVKWCIEFGIE--ANSIIAAPYDWRL--SPSKLEERDLYFHKLKLTFETALK-------------------LR--G 187 (558)
Q Consensus 133 ~y~~li~~L~~~GY~--~~~L~gapYDWRl--s~~~~e~~d~y~~~Lk~lIE~~~~-------------------~~--g 187 (558)
|+..+++.|.+.||. ..|++|++..=+. ........+++.+++.++++.+.+ .+ +
T Consensus 62 y~~~~~~~l~~~G~~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (332)
T TIGR01607 62 YKDSWIENFNKNGYSVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENR 141 (332)
T ss_pred eeHHHHHHHHHCCCcEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCC
Confidence 346899999999996 4688888754322 122223567888999999998764 22 4
Q ss_pred CcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhh-hhceEEEecCCC
Q 008645 188 GPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDE-HIHAYFAVGSPF 236 (558)
Q Consensus 188 ~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk-~I~~~I~lg~P~ 236 (558)
.|++|+||||||++++.|++.... .+.|+++ .|+++|.+++++
T Consensus 142 ~p~~l~GhSmGg~i~~~~~~~~~~------~~~~~~~~~i~g~i~~s~~~ 185 (332)
T TIGR01607 142 LPMYIIGLSMGGNIALRLLELLGK------SNENNDKLNIKGCISLSGMI 185 (332)
T ss_pred CceeEeeccCccHHHHHHHHHhcc------ccccccccccceEEEeccce
Confidence 699999999999999999986532 3678876 899999998877
No 9
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.21 E-value=2.2e-06 Score=90.55 Aligned_cols=96 Identities=18% Similarity=0.175 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHcCCccccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcCC-cEEEEEeCCCcHHHHHHHHHhhc
Q 008645 133 VWKEWVKWCIEFGIEANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRGG-PSLVLAHSLGNNVFRYFLEWLKL 211 (558)
Q Consensus 133 ~y~~li~~L~~~GY~~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g~-~VvLIaHSMGGlva~~fL~~~~~ 211 (558)
.|..+-..|+..||-..++...-+++=...... ..-.++|.+.|++.++..|. ||.||||||||+++|||++.+..
T Consensus 74 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~~ql~~~V~~~l~~~ga~~v~LigHS~GG~~~ry~~~~~~~ 150 (336)
T COG1075 74 NFLPLDYRLAILGWLTNGVYAFELSGGDGTYSL---AVRGEQLFAYVDEVLAKTGAKKVNLIGHSMGGLDSRYYLGVLGG 150 (336)
T ss_pred hhhhhhhhhcchHHHhcccccccccccCCCccc---cccHHHHHHHHHHHHhhcCCCceEEEeecccchhhHHHHhhcCc
Confidence 344445556777775444544444422222211 12356899999999998876 89999999999999999987642
Q ss_pred cCCCccchhhhhhhhceEEEecCCCCCchhh
Q 008645 212 EIPPKQYIKWLDEHIHAYFAVGSPFLGATQS 242 (558)
Q Consensus 212 ~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs~~a 242 (558)
. ..|++++++++|+.|+..+
T Consensus 151 ~-----------~~V~~~~tl~tp~~Gt~~~ 170 (336)
T COG1075 151 A-----------NRVASVVTLGTPHHGTELA 170 (336)
T ss_pred c-----------ceEEEEEEeccCCCCchhh
Confidence 1 4799999999999999887
No 10
>PLN02965 Probable pheophorbidase
Probab=98.12 E-value=9.5e-06 Score=80.95 Aligned_cols=88 Identities=15% Similarity=0.132 Sum_probs=64.0
Q ss_pred hHHHHHHHHHHHcCCc--cccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHHHHh
Q 008645 132 SVWKEWVKWCIEFGIE--ANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFLEWL 209 (558)
Q Consensus 132 ~~y~~li~~L~~~GY~--~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL~~~ 209 (558)
..|..+++.|.+.||+ .-|++|++..-+...... ..+.+.+++.++|++.- .++|++||||||||.++..++...
T Consensus 17 ~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~-~~~~~a~dl~~~l~~l~--~~~~~~lvGhSmGG~ia~~~a~~~ 93 (255)
T PLN02965 17 WCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVS-SSDQYNRPLFALLSDLP--PDHKVILVGHSIGGGSVTEALCKF 93 (255)
T ss_pred CcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccC-CHHHHHHHHHHHHHhcC--CCCCEEEEecCcchHHHHHHHHhC
Confidence 4789999999999995 368888886643221111 24567778888887531 125899999999999999888753
Q ss_pred hccCCCccchhhhhhhhceEEEecCC
Q 008645 210 KLEIPPKQYIKWLDEHIHAYFAVGSP 235 (558)
Q Consensus 210 ~~~~~~~~~~~Wkdk~I~~~I~lg~P 235 (558)
. ..|+++|.+++.
T Consensus 94 p-------------~~v~~lvl~~~~ 106 (255)
T PLN02965 94 T-------------DKISMAIYVAAA 106 (255)
T ss_pred c-------------hheeEEEEEccc
Confidence 1 368999988764
No 11
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.09 E-value=1e-05 Score=80.23 Aligned_cols=108 Identities=16% Similarity=0.159 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHc--CCccccceeecCC--CCCCCchhhhhhHHHHHHHHHHHHHHHhcC---CcEEEEEeCCCcHHHHHH
Q 008645 133 VWKEWVKWCIEF--GIEANSIIAAPYD--WRLSPSKLEERDLYFHKLKLTFETALKLRG---GPSLVLAHSLGNNVFRYF 205 (558)
Q Consensus 133 ~y~~li~~L~~~--GY~~~~L~gapYD--WRls~~~~e~~d~y~~~Lk~lIE~~~~~~g---~~VvLIaHSMGGlva~~f 205 (558)
.|..+.+.|... .+....+...+|+ +...... .+...++|.+.|.+..+... .|+++|||||||+|+|+.
T Consensus 19 d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~T~~g---I~~~g~rL~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~a 95 (217)
T PF05057_consen 19 DMRYLKNHLEKIPEDLPNARIVVLGYSNNEFKTFDG---IDVCGERLAEEILEHIKDYESKIRKISFIGHSLGGLIARYA 95 (217)
T ss_pred HHHHHHHHHHHhhhhcchhhhhhhcccccccccchh---hHHHHHHHHHHHHHhccccccccccceEEEecccHHHHHHH
Confidence 455555555553 3322344444443 2222221 23345566555555544332 379999999999999999
Q ss_pred HHHhhccCCCccchhh-hhhhhceEEEecCCCCCchhhhhh
Q 008645 206 LEWLKLEIPPKQYIKW-LDEHIHAYFAVGSPFLGATQSVKA 245 (558)
Q Consensus 206 L~~~~~~~~~~~~~~W-kdk~I~~~I~lg~P~~Gs~~al~~ 245 (558)
|........ ..+.- ..-+...||++|+|+.|+..+-..
T Consensus 96 l~~~~~~~~--~~~~~~~~~~~~~fitlatPH~G~~~~~~~ 134 (217)
T PF05057_consen 96 LGLLHDKPQ--YFPGFFQKIKPHNFITLATPHLGSRYASST 134 (217)
T ss_pred HHHhhhccc--cccccccceeeeeEEEeCCCCCCCcccccc
Confidence 987643210 00011 112566899999999999877544
No 12
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=98.02 E-value=1.6e-05 Score=81.06 Aligned_cols=87 Identities=14% Similarity=0.087 Sum_probs=59.3
Q ss_pred hHHHHHHHHHHHcCCc--cccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHHHHh
Q 008645 132 SVWKEWVKWCIEFGIE--ANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFLEWL 209 (558)
Q Consensus 132 ~~y~~li~~L~~~GY~--~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL~~~ 209 (558)
..|..+++.|++.||. ..|++++..+-.. +...-..+++.+.+.++|++.. .+++|+||||||||+++..++...
T Consensus 32 ~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~-~~~~~~~~~~~~~l~~~i~~l~--~~~~v~lvGhS~GG~v~~~~a~~~ 108 (273)
T PLN02211 32 WCWYKIRCLMENSGYKVTCIDLKSAGIDQSD-ADSVTTFDEYNKPLIDFLSSLP--ENEKVILVGHSAGGLSVTQAIHRF 108 (273)
T ss_pred CcHHHHHHHHHhCCCEEEEecccCCCCCCCC-cccCCCHHHHHHHHHHHHHhcC--CCCCEEEEEECchHHHHHHHHHhC
Confidence 3789999999999995 3577776644221 1111133456666666666431 136899999999999999888642
Q ss_pred hccCCCccchhhhhhhhceEEEecC
Q 008645 210 KLEIPPKQYIKWLDEHIHAYFAVGS 234 (558)
Q Consensus 210 ~~~~~~~~~~~Wkdk~I~~~I~lg~ 234 (558)
. +.|+++|.+++
T Consensus 109 p-------------~~v~~lv~~~~ 120 (273)
T PLN02211 109 P-------------KKICLAVYVAA 120 (273)
T ss_pred h-------------hheeEEEEecc
Confidence 1 36899999854
No 13
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=98.00 E-value=1.4e-05 Score=74.58 Aligned_cols=90 Identities=9% Similarity=0.037 Sum_probs=59.3
Q ss_pred hHHHHHHHHHHHcCCcc--ccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHHHHh
Q 008645 132 SVWKEWVKWCIEFGIEA--NSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFLEWL 209 (558)
Q Consensus 132 ~~y~~li~~L~~~GY~~--~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL~~~ 209 (558)
..|..+++.|. .||.. -|++|++..-+.........+++.+++.++|++.- .+|++||||||||.++..++...
T Consensus 12 ~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~lvG~S~Gg~~a~~~a~~~ 87 (228)
T PF12697_consen 12 ESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALG---IKKVILVGHSMGGMIALRLAARY 87 (228)
T ss_dssp GGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTT---TSSEEEEEETHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhcccccc---ccccccccccccccccccccccc
Confidence 47888999994 78852 35554443332221011123456666777666432 26899999999999999988753
Q ss_pred hccCCCccchhhhhhhhceEEEecCCCCC
Q 008645 210 KLEIPPKQYIKWLDEHIHAYFAVGSPFLG 238 (558)
Q Consensus 210 ~~~~~~~~~~~Wkdk~I~~~I~lg~P~~G 238 (558)
. ..|+++|.++++...
T Consensus 88 p-------------~~v~~~vl~~~~~~~ 103 (228)
T PF12697_consen 88 P-------------DRVKGLVLLSPPPPL 103 (228)
T ss_dssp G-------------GGEEEEEEESESSSH
T ss_pred c-------------cccccceeecccccc
Confidence 1 279999999877743
No 14
>PHA02857 monoglyceride lipase; Provisional
Probab=97.98 E-value=4.4e-05 Score=76.60 Aligned_cols=91 Identities=14% Similarity=0.102 Sum_probs=61.6
Q ss_pred hhHHHHHHHHHHHcCCc--cccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEeCCCcHHHHHHHH
Q 008645 131 SSVWKEWVKWCIEFGIE--ANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRG-GPSLVLAHSLGNNVFRYFLE 207 (558)
Q Consensus 131 ~~~y~~li~~L~~~GY~--~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g-~~VvLIaHSMGGlva~~fL~ 207 (558)
+..|..+++.|.+.||. .-|++|++..=+. ....+....+.+++.+.++...+... .|++|+||||||.++..+..
T Consensus 38 ~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~-~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~ 116 (276)
T PHA02857 38 SGRYEELAENISSLGILVFSHDHIGHGRSNGE-KMMIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAY 116 (276)
T ss_pred cchHHHHHHHHHhCCCEEEEccCCCCCCCCCc-cCCcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHH
Confidence 45789999999999995 3577777653221 11122334556666666665443333 48999999999999988775
Q ss_pred HhhccCCCccchhhhhhhhceEEEecCC
Q 008645 208 WLKLEIPPKQYIKWLDEHIHAYFAVGSP 235 (558)
Q Consensus 208 ~~~~~~~~~~~~~Wkdk~I~~~I~lg~P 235 (558)
.. .+.|+++|.++++
T Consensus 117 ~~-------------p~~i~~lil~~p~ 131 (276)
T PHA02857 117 KN-------------PNLFTAMILMSPL 131 (276)
T ss_pred hC-------------ccccceEEEeccc
Confidence 32 1258999998764
No 15
>PRK10749 lysophospholipase L2; Provisional
Probab=97.98 E-value=2.8e-05 Score=81.17 Aligned_cols=91 Identities=16% Similarity=0.169 Sum_probs=65.7
Q ss_pred hHHHHHHHHHHHcCCc--cccceeecCCCCCCCc----hhhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEeCCCcHHHHH
Q 008645 132 SVWKEWVKWCIEFGIE--ANSIIAAPYDWRLSPS----KLEERDLYFHKLKLTFETALKLRG-GPSLVLAHSLGNNVFRY 204 (558)
Q Consensus 132 ~~y~~li~~L~~~GY~--~~~L~gapYDWRls~~----~~e~~d~y~~~Lk~lIE~~~~~~g-~~VvLIaHSMGGlva~~ 204 (558)
..|..++..|.+.||. .-|++|++-.-|.... .....+++.+++..+++...+..+ .|++|+||||||.+++.
T Consensus 68 ~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~ 147 (330)
T PRK10749 68 VKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTL 147 (330)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHH
Confidence 3688899999999996 3578887765432111 112457788999999988765533 58999999999999998
Q ss_pred HHHHhhccCCCccchhhhhhhhceEEEecCC
Q 008645 205 FLEWLKLEIPPKQYIKWLDEHIHAYFAVGSP 235 (558)
Q Consensus 205 fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P 235 (558)
++.... ..|+++|.++++
T Consensus 148 ~a~~~p-------------~~v~~lvl~~p~ 165 (330)
T PRK10749 148 FLQRHP-------------GVFDAIALCAPM 165 (330)
T ss_pred HHHhCC-------------CCcceEEEECch
Confidence 886421 258999977543
No 16
>PRK00870 haloalkane dehalogenase; Provisional
Probab=97.97 E-value=3e-05 Score=79.32 Aligned_cols=90 Identities=8% Similarity=-0.016 Sum_probs=62.4
Q ss_pred hhhHHHHHHHHHHHcCCc--cccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHHH
Q 008645 130 LSSVWKEWVKWCIEFGIE--ANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFLE 207 (558)
Q Consensus 130 ~~~~y~~li~~L~~~GY~--~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL~ 207 (558)
....|..+++.|.+.||. .-|++|+++.=+......-..+++.+.+.+++++. ..+||+||||||||.++..+..
T Consensus 58 ~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~ 134 (302)
T PRK00870 58 WSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQL---DLTDVTLVCQDWGGLIGLRLAA 134 (302)
T ss_pred chhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc---CCCCEEEEEEChHHHHHHHHHH
Confidence 345799999999988996 36888888753221111112355667777766643 3358999999999999998886
Q ss_pred HhhccCCCccchhhhhhhhceEEEecCC
Q 008645 208 WLKLEIPPKQYIKWLDEHIHAYFAVGSP 235 (558)
Q Consensus 208 ~~~~~~~~~~~~~Wkdk~I~~~I~lg~P 235 (558)
... +.|+++|.+++.
T Consensus 135 ~~p-------------~~v~~lvl~~~~ 149 (302)
T PRK00870 135 EHP-------------DRFARLVVANTG 149 (302)
T ss_pred hCh-------------hheeEEEEeCCC
Confidence 421 359999988653
No 17
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=97.89 E-value=2.5e-05 Score=82.20 Aligned_cols=86 Identities=13% Similarity=0.136 Sum_probs=62.4
Q ss_pred HHHHHHHHHHcCCccccceeecCCCCCCCch--hhhhhHHHHH-HHHHHHHHHHhcCC-cEEEEEeCCCcHHHHHHHHHh
Q 008645 134 WKEWVKWCIEFGIEANSIIAAPYDWRLSPSK--LEERDLYFHK-LKLTFETALKLRGG-PSLVLAHSLGNNVFRYFLEWL 209 (558)
Q Consensus 134 y~~li~~L~~~GY~~~~L~gapYDWRls~~~--~e~~d~y~~~-Lk~lIE~~~~~~g~-~VvLIaHSMGGlva~~fL~~~ 209 (558)
+..+++.|.+.||+ ..-+|||..... ....++|..+ +.+.|+.+.+..+. |++|+||||||.++..++...
T Consensus 83 ~~~~~~~L~~~G~~-----V~~~D~~g~g~s~~~~~~~d~~~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~ 157 (350)
T TIGR01836 83 DRSLVRGLLERGQD-----VYLIDWGYPDRADRYLTLDDYINGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALY 157 (350)
T ss_pred CchHHHHHHHCCCe-----EEEEeCCCCCHHHhcCCHHHHHHHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhC
Confidence 35689999999996 345588853211 0123556544 88888888877654 899999999999998877642
Q ss_pred hccCCCccchhhhhhhhceEEEecCCCC
Q 008645 210 KLEIPPKQYIKWLDEHIHAYFAVGSPFL 237 (558)
Q Consensus 210 ~~~~~~~~~~~Wkdk~I~~~I~lg~P~~ 237 (558)
. ..|+++|++++|+.
T Consensus 158 ~-------------~~v~~lv~~~~p~~ 172 (350)
T TIGR01836 158 P-------------DKIKNLVTMVTPVD 172 (350)
T ss_pred c-------------hheeeEEEeccccc
Confidence 1 25999999999984
No 18
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=97.86 E-value=4.5e-05 Score=79.08 Aligned_cols=90 Identities=13% Similarity=0.139 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHcCCcc--ccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhc---CCcEEEEEeCCCcHHHHHHHH
Q 008645 133 VWKEWVKWCIEFGIEA--NSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLR---GGPSLVLAHSLGNNVFRYFLE 207 (558)
Q Consensus 133 ~y~~li~~L~~~GY~~--~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~---g~~VvLIaHSMGGlva~~fL~ 207 (558)
.|..+++.|.+.||.. .|++|+++.-+. .......+.+.++++.+|+.+.... +.|++|+||||||.++..+..
T Consensus 75 ~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~-~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~ 153 (330)
T PLN02298 75 TFQSTAIFLAQMGFACFALDLEGHGRSEGL-RAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHL 153 (330)
T ss_pred ehhHHHHHHHhCCCEEEEecCCCCCCCCCc-cccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHh
Confidence 5677888999999963 577777765332 1111234668889999999876532 458999999999999987665
Q ss_pred HhhccCCCccchhhhhhhhceEEEecCCC
Q 008645 208 WLKLEIPPKQYIKWLDEHIHAYFAVGSPF 236 (558)
Q Consensus 208 ~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~ 236 (558)
.. | ..|+++|.++++.
T Consensus 154 ~~-----p--------~~v~~lvl~~~~~ 169 (330)
T PLN02298 154 AN-----P--------EGFDGAVLVAPMC 169 (330)
T ss_pred cC-----c--------ccceeEEEecccc
Confidence 31 1 2599999996654
No 19
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=97.72 E-value=0.00013 Score=76.60 Aligned_cols=89 Identities=13% Similarity=0.042 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHcCCc--cccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHh---cCCcEEEEEeCCCcHHHHHHHH
Q 008645 133 VWKEWVKWCIEFGIE--ANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKL---RGGPSLVLAHSLGNNVFRYFLE 207 (558)
Q Consensus 133 ~y~~li~~L~~~GY~--~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~---~g~~VvLIaHSMGGlva~~fL~ 207 (558)
+|..+++.|.+.||. ..|++|++..=+.. ......+.+.+++.++++.+... .+.|++|+||||||.++..+..
T Consensus 103 ~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~-~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~ 181 (349)
T PLN02385 103 FFEGIARKIASSGYGVFAMDYPGFGLSEGLH-GYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHL 181 (349)
T ss_pred HHHHHHHHHHhCCCEEEEecCCCCCCCCCCC-CCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHH
Confidence 578899999999995 35777776543211 11123456777788887766432 2348999999999999988765
Q ss_pred HhhccCCCccchhhhhhhhceEEEecCC
Q 008645 208 WLKLEIPPKQYIKWLDEHIHAYFAVGSP 235 (558)
Q Consensus 208 ~~~~~~~~~~~~~Wkdk~I~~~I~lg~P 235 (558)
... ..|+++|.+++.
T Consensus 182 ~~p-------------~~v~glVLi~p~ 196 (349)
T PLN02385 182 KQP-------------NAWDGAILVAPM 196 (349)
T ss_pred hCc-------------chhhheeEeccc
Confidence 421 258999998653
No 20
>PRK10985 putative hydrolase; Provisional
Probab=97.69 E-value=0.00016 Score=75.47 Aligned_cols=94 Identities=15% Similarity=0.106 Sum_probs=61.5
Q ss_pred hHHHHHHHHHHHcCCcc--ccceeecCCCCCCCchhh--hhhHHHHHHHHHHHHHHHhcC-CcEEEEEeCCCcHHHHHHH
Q 008645 132 SVWKEWVKWCIEFGIEA--NSIIAAPYDWRLSPSKLE--ERDLYFHKLKLTFETALKLRG-GPSLVLAHSLGNNVFRYFL 206 (558)
Q Consensus 132 ~~y~~li~~L~~~GY~~--~~L~gapYDWRls~~~~e--~~d~y~~~Lk~lIE~~~~~~g-~~VvLIaHSMGGlva~~fL 206 (558)
.++..+++.|.+.||.. .|.+|..- ++.... -.....+++...|+.+.+..+ .|++++||||||.++..++
T Consensus 74 ~~~~~~~~~l~~~G~~v~~~d~rG~g~----~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~ 149 (324)
T PRK10985 74 PYAHGLLEAAQKRGWLGVVMHFRGCSG----EPNRLHRIYHSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLL 149 (324)
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCCCC----CccCCcceECCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHH
Confidence 35677999999999952 34444321 111100 001235678888887776555 4899999999999888777
Q ss_pred HHhhccCCCccchhhhhhhhceEEEecCCCCCch
Q 008645 207 EWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGAT 240 (558)
Q Consensus 207 ~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs~ 240 (558)
..... +..|+++|++++|+.+..
T Consensus 150 ~~~~~-----------~~~~~~~v~i~~p~~~~~ 172 (324)
T PRK10985 150 AKEGD-----------DLPLDAAVIVSAPLMLEA 172 (324)
T ss_pred HhhCC-----------CCCccEEEEEcCCCCHHH
Confidence 64211 124899999999997553
No 21
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=97.68 E-value=0.00015 Score=73.62 Aligned_cols=90 Identities=13% Similarity=0.130 Sum_probs=62.6
Q ss_pred hhHHHHHHHHHHHcCC-ccccceeecCCCCCCCc-----hhhhhhHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHH
Q 008645 131 SSVWKEWVKWCIEFGI-EANSIIAAPYDWRLSPS-----KLEERDLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRY 204 (558)
Q Consensus 131 ~~~y~~li~~L~~~GY-~~~~L~gapYDWRls~~-----~~e~~d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~ 204 (558)
+..|..++..|.+.+- -.-|++|++..=+..+. ..-..+++.++|..+|++. ..+|++||||||||.++..
T Consensus 42 ~~~w~~~~~~L~~~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l---~~~~~~lvGhS~Gg~va~~ 118 (294)
T PLN02824 42 ADHWRKNTPVLAKSHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV---VGDPAFVICNSVGGVVGLQ 118 (294)
T ss_pred hhHHHHHHHHHHhCCeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHh---cCCCeEEEEeCHHHHHHHH
Confidence 3478899999987642 13578888775443211 0113456777888887754 3468999999999999998
Q ss_pred HHHHhhccCCCccchhhhhhhhceEEEecCCC
Q 008645 205 FLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPF 236 (558)
Q Consensus 205 fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~ 236 (558)
|..... +.|+++|.++++.
T Consensus 119 ~a~~~p-------------~~v~~lili~~~~ 137 (294)
T PLN02824 119 AAVDAP-------------ELVRGVMLINISL 137 (294)
T ss_pred HHHhCh-------------hheeEEEEECCCc
Confidence 876421 3699999998764
No 22
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=97.64 E-value=7.8e-05 Score=76.18 Aligned_cols=78 Identities=18% Similarity=0.186 Sum_probs=51.8
Q ss_pred cceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcCC-cEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhce
Q 008645 150 SIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRGG-PSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHA 228 (558)
Q Consensus 150 ~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g~-~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~ 228 (558)
.++-.-|++..... ......-|++.++.+.++++- ++.+|||||||+.+.+||.....+. .--.|.+
T Consensus 68 PiIqV~F~~n~~~~----~~~qa~wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~--------~~P~l~K 135 (255)
T PF06028_consen 68 PIIQVNFEDNRNAN----YKKQAKWLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDK--------NLPKLNK 135 (255)
T ss_dssp -EEEEEESSTT-CH----HHHHHHHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGT--------TS-EEEE
T ss_pred CEEEEEecCCCcCC----HHHHHHHHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCC--------CCcccce
Confidence 45555666655311 233466788888888888876 7999999999999999998653210 0015899
Q ss_pred EEEecCCCCCc
Q 008645 229 YFAVGSPFLGA 239 (558)
Q Consensus 229 ~I~lg~P~~Gs 239 (558)
+|+||+||-|.
T Consensus 136 ~V~Ia~pfng~ 146 (255)
T PF06028_consen 136 LVTIAGPFNGI 146 (255)
T ss_dssp EEEES--TTTT
T ss_pred EEEeccccCcc
Confidence 99999999776
No 23
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=97.62 E-value=0.00023 Score=73.15 Aligned_cols=89 Identities=7% Similarity=-0.068 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHcCCc--cccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHHHHhh
Q 008645 133 VWKEWVKWCIEFGIE--ANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFLEWLK 210 (558)
Q Consensus 133 ~y~~li~~L~~~GY~--~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL~~~~ 210 (558)
.|..+++.|.+.||. ..|++|++..-.. ... ...+.+.++++..++.+.+....||+|+||||||.++..+.....
T Consensus 44 ~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~-~~~-~~~~~~~~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p 121 (266)
T TIGR03101 44 MVALQARAFAAGGFGVLQIDLYGCGDSAGD-FAA-ARWDVWKEDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLA 121 (266)
T ss_pred HHHHHHHHHHHCCCEEEEECCCCCCCCCCc-ccc-CCHHHHHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCc
Confidence 678889999999996 3577777654211 111 123456777888877766543458999999999999987765421
Q ss_pred ccCCCccchhhhhhhhceEEEecCCC
Q 008645 211 LEIPPKQYIKWLDEHIHAYFAVGSPF 236 (558)
Q Consensus 211 ~~~~~~~~~~Wkdk~I~~~I~lg~P~ 236 (558)
..|+++|.+++..
T Consensus 122 -------------~~v~~lVL~~P~~ 134 (266)
T TIGR03101 122 -------------AKCNRLVLWQPVV 134 (266)
T ss_pred -------------cccceEEEecccc
Confidence 2588899886443
No 24
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.53 E-value=0.0002 Score=79.50 Aligned_cols=118 Identities=14% Similarity=0.077 Sum_probs=71.5
Q ss_pred ecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhc---CCcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEE
Q 008645 154 APYDWRLSPSKLEERDLYFHKLKLTFETALKLR---GGPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYF 230 (558)
Q Consensus 154 apYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~---g~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I 230 (558)
.=||||--....+.+.....+..++.|+..+.. ++||+-||||||||+++..|-..--..-|+..+-|+ ..+++|
T Consensus 489 sit~w~~~~p~e~~r~sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~k--NtrGii 566 (697)
T KOG2029|consen 489 SITDWRARCPAEAHRRSLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNK--NTRGII 566 (697)
T ss_pred chhhhcccCcccchhhHHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhc--cCCceE
Confidence 457899632222234455666667777665533 459999999999999998875321111233345565 468899
Q ss_pred EecCCCCCchhhhhhhhcCCCCCCC------C--chHHHHHHHhhcCccccc
Q 008645 231 AVGSPFLGATQSVKATLSGETSGLP------V--SEGTARLMFNSFGSSLWM 274 (558)
Q Consensus 231 ~lg~P~~Gs~~al~~llsG~~~glp------i--~~~~~r~~~rs~pS~~~L 274 (558)
.++.|+.|+..|=..--+. ..+.| + +...++++.|.|-+.+..
T Consensus 567 Fls~PHrGS~lA~~k~~~~-~llsPS~ev~eleknn~~l~~L~~~F~g~~~~ 617 (697)
T KOG2029|consen 567 FLSVPHRGSRLAGWKNESS-SLLSPSNEVKELEKNNPDLLNLHRRFDGSSHG 617 (697)
T ss_pred EEecCCCCCccccccccch-hhcCchHHHHHHhhcCHHHHHHHHhhcchhhc
Confidence 9999999999873211100 01112 1 223467788888755443
No 25
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=97.51 E-value=0.00037 Score=68.05 Aligned_cols=84 Identities=12% Similarity=0.025 Sum_probs=54.6
Q ss_pred hHHHHHHHHHHHcCCcc--ccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHHHHh
Q 008645 132 SVWKEWVKWCIEFGIEA--NSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFLEWL 209 (558)
Q Consensus 132 ~~y~~li~~L~~~GY~~--~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL~~~ 209 (558)
..|..+++.|. +|.. -|++|++..=+.. ....+.+.+++.++|++. ..+|++||||||||.++..+....
T Consensus 16 ~~w~~~~~~l~--~~~vi~~D~~G~G~S~~~~---~~~~~~~~~~l~~~l~~~---~~~~~~lvG~S~Gg~va~~~a~~~ 87 (242)
T PRK11126 16 QDWQPVGEALP--DYPRLYIDLPGHGGSAAIS---VDGFADVSRLLSQTLQSY---NILPYWLVGYSLGGRIAMYYACQG 87 (242)
T ss_pred HHHHHHHHHcC--CCCEEEecCCCCCCCCCcc---ccCHHHHHHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHhC
Confidence 47889999883 5752 4565555432211 123455666666666642 235899999999999999887653
Q ss_pred hccCCCccchhhhhhhhceEEEecCC
Q 008645 210 KLEIPPKQYIKWLDEHIHAYFAVGSP 235 (558)
Q Consensus 210 ~~~~~~~~~~~Wkdk~I~~~I~lg~P 235 (558)
. ++.|+++|.++++
T Consensus 88 ~------------~~~v~~lvl~~~~ 101 (242)
T PRK11126 88 L------------AGGLCGLIVEGGN 101 (242)
T ss_pred C------------cccccEEEEeCCC
Confidence 1 1249999987655
No 26
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=97.46 E-value=0.00029 Score=67.05 Aligned_cols=85 Identities=6% Similarity=-0.027 Sum_probs=55.3
Q ss_pred hHHHHHHHHHHHcCCc--cccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHHHHh
Q 008645 132 SVWKEWVKWCIEFGIE--ANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFLEWL 209 (558)
Q Consensus 132 ~~y~~li~~L~~~GY~--~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL~~~ 209 (558)
..|..+++.|. .||. ..|++|++..-+.... . ..+++.+++.+.++.. ...+|+|+||||||.++..++...
T Consensus 27 ~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~-~-~~~~~~~~~~~~i~~~---~~~~v~liG~S~Gg~~a~~~a~~~ 100 (251)
T TIGR02427 27 RMWDPVLPALT-PDFRVLRYDKRGHGLSDAPEGP-Y-SIEDLADDVLALLDHL---GIERAVFCGLSLGGLIAQGLAARR 100 (251)
T ss_pred hhHHHHHHHhh-cccEEEEecCCCCCCCCCCCCC-C-CHHHHHHHHHHHHHHh---CCCceEEEEeCchHHHHHHHHHHC
Confidence 36788888886 4785 3577777665322111 1 2344556666666543 235899999999999998877642
Q ss_pred hccCCCccchhhhhhhhceEEEecCC
Q 008645 210 KLEIPPKQYIKWLDEHIHAYFAVGSP 235 (558)
Q Consensus 210 ~~~~~~~~~~~Wkdk~I~~~I~lg~P 235 (558)
.+.|+++|.++++
T Consensus 101 -------------p~~v~~li~~~~~ 113 (251)
T TIGR02427 101 -------------PDRVRALVLSNTA 113 (251)
T ss_pred -------------HHHhHHHhhccCc
Confidence 1358888888654
No 27
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=97.44 E-value=0.0005 Score=65.10 Aligned_cols=87 Identities=10% Similarity=0.091 Sum_probs=51.1
Q ss_pred hHHHHHHHHHHHcCCcc--ccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCcHHHHHHHHH
Q 008645 132 SVWKEWVKWCIEFGIEA--NSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLR-GGPSLVLAHSLGNNVFRYFLEW 208 (558)
Q Consensus 132 ~~y~~li~~L~~~GY~~--~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~-g~~VvLIaHSMGGlva~~fL~~ 208 (558)
..|..+++.|. .||.. -|+++++..=+..... ...+.+.++.++....+.. .++++|+||||||.++..+...
T Consensus 15 ~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia~~~a~~ 90 (251)
T TIGR03695 15 ADWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIE---RYDFEEAAQDILATLLDQLGIEPFFLVGYSMGGRIALYYALQ 90 (251)
T ss_pred hhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccC---hhhHHHHHHHHHHHHHHHcCCCeEEEEEeccHHHHHHHHHHh
Confidence 46889999998 78852 3555544431111001 1112222222233333333 3589999999999999888765
Q ss_pred hhccCCCccchhhhhhhhceEEEecCC
Q 008645 209 LKLEIPPKQYIKWLDEHIHAYFAVGSP 235 (558)
Q Consensus 209 ~~~~~~~~~~~~Wkdk~I~~~I~lg~P 235 (558)
.. +.|+++|.++++
T Consensus 91 ~~-------------~~v~~lil~~~~ 104 (251)
T TIGR03695 91 YP-------------ERVQGLILESGS 104 (251)
T ss_pred Cc-------------hheeeeEEecCC
Confidence 31 258999987654
No 28
>PLN02511 hydrolase
Probab=97.44 E-value=0.00041 Score=74.64 Aligned_cols=92 Identities=11% Similarity=0.035 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHcCCcc--ccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcCC-cEEEEEeCCCcHHHHHHHHHh
Q 008645 133 VWKEWVKWCIEFGIEA--NSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRGG-PSLVLAHSLGNNVFRYFLEWL 209 (558)
Q Consensus 133 ~y~~li~~L~~~GY~~--~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g~-~VvLIaHSMGGlva~~fL~~~ 209 (558)
++..++..|.+.||.. .|++|++-.=+..+... ...+.++|+..|+.+..+.++ |+++|||||||.++..|+...
T Consensus 117 y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~~--~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~ 194 (388)
T PLN02511 117 YVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQFY--SASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEE 194 (388)
T ss_pred HHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcCEE--cCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhc
Confidence 5667888888899953 46666554322222111 134677899999888776654 899999999999999888653
Q ss_pred hccCCCccchhhhhhhhceEEEecCCCC
Q 008645 210 KLEIPPKQYIKWLDEHIHAYFAVGSPFL 237 (558)
Q Consensus 210 ~~~~~~~~~~~Wkdk~I~~~I~lg~P~~ 237 (558)
.. ...|.+.|.|++|+.
T Consensus 195 ~~-----------~~~v~~~v~is~p~~ 211 (388)
T PLN02511 195 GE-----------NCPLSGAVSLCNPFD 211 (388)
T ss_pred CC-----------CCCceEEEEECCCcC
Confidence 21 124899999999984
No 29
>PRK10349 carboxylesterase BioH; Provisional
Probab=97.43 E-value=0.00041 Score=68.76 Aligned_cols=81 Identities=17% Similarity=0.105 Sum_probs=51.8
Q ss_pred hhHHHHHHHHHHHcCCc--cccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHHHH
Q 008645 131 SSVWKEWVKWCIEFGIE--ANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFLEW 208 (558)
Q Consensus 131 ~~~y~~li~~L~~~GY~--~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL~~ 208 (558)
+..|..+++.|.+. |. .-|++|++..=+.... . +.++++.+.+...++++||||||||.++.++...
T Consensus 26 ~~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~~~---~-------~~~~~~~l~~~~~~~~~lvGhS~Gg~ia~~~a~~ 94 (256)
T PRK10349 26 AEVWRCIDEELSSH-FTLHLVDLPGFGRSRGFGAL---S-------LADMAEAVLQQAPDKAIWLGWSLGGLVASQIALT 94 (256)
T ss_pred hhHHHHHHHHHhcC-CEEEEecCCCCCCCCCCCCC---C-------HHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHHh
Confidence 35789999999754 74 3577777654321111 1 1222333323334589999999999999988764
Q ss_pred hhccCCCccchhhhhhhhceEEEecCC
Q 008645 209 LKLEIPPKQYIKWLDEHIHAYFAVGSP 235 (558)
Q Consensus 209 ~~~~~~~~~~~~Wkdk~I~~~I~lg~P 235 (558)
. ...|+++|.++++
T Consensus 95 ~-------------p~~v~~lili~~~ 108 (256)
T PRK10349 95 H-------------PERVQALVTVASS 108 (256)
T ss_pred C-------------hHhhheEEEecCc
Confidence 2 1369999988653
No 30
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=97.40 E-value=0.00053 Score=74.18 Aligned_cols=92 Identities=13% Similarity=0.139 Sum_probs=61.3
Q ss_pred hHHHHHHHHHHHcCCcc--ccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEeCCCcHHHHHHHHH
Q 008645 132 SVWKEWVKWCIEFGIEA--NSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRG-GPSLVLAHSLGNNVFRYFLEW 208 (558)
Q Consensus 132 ~~y~~li~~L~~~GY~~--~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g-~~VvLIaHSMGGlva~~fL~~ 208 (558)
..|..+++.|.+.||.. .|++|++-.-+.. ......+.+.+++..+++.+...+. .|++|+||||||+++..++..
T Consensus 150 ~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~-~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~~ 228 (395)
T PLN02652 150 GRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLH-GYVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAASY 228 (395)
T ss_pred HHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC-CCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHhc
Confidence 35889999999999952 4555554422211 1111345677888888888876553 489999999999999876542
Q ss_pred hhccCCCccchhhhhhhhceEEEecCCC
Q 008645 209 LKLEIPPKQYIKWLDEHIHAYFAVGSPF 236 (558)
Q Consensus 209 ~~~~~~~~~~~~Wkdk~I~~~I~lg~P~ 236 (558)
-+ ....|+++|..+ |+
T Consensus 229 p~-----------~~~~v~glVL~s-P~ 244 (395)
T PLN02652 229 PS-----------IEDKLEGIVLTS-PA 244 (395)
T ss_pred cC-----------cccccceEEEEC-cc
Confidence 10 012588999774 54
No 31
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=97.37 E-value=0.0009 Score=68.25 Aligned_cols=86 Identities=3% Similarity=-0.141 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHcCCc--cccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhc-C-CcEEEEEeCCCcHHHHHHHHH
Q 008645 133 VWKEWVKWCIEFGIE--ANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLR-G-GPSLVLAHSLGNNVFRYFLEW 208 (558)
Q Consensus 133 ~y~~li~~L~~~GY~--~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~-g-~~VvLIaHSMGGlva~~fL~~ 208 (558)
.|..+++.|.+.||. .-|++|.+-.-. .....+.+.+++.+.++...+.. + .+|+|+||||||+++..+...
T Consensus 45 ~~~~la~~l~~~G~~v~~~Dl~G~G~S~~----~~~~~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~ 120 (274)
T TIGR03100 45 QFVLLARRLAEAGFPVLRFDYRGMGDSEG----ENLGFEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA 120 (274)
T ss_pred HHHHHHHHHHHCCCEEEEeCCCCCCCCCC----CCCCHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh
Confidence 577899999999996 346666543211 11123456778888888776543 4 369999999999999876532
Q ss_pred hhccCCCccchhhhhhhhceEEEecCCC
Q 008645 209 LKLEIPPKQYIKWLDEHIHAYFAVGSPF 236 (558)
Q Consensus 209 ~~~~~~~~~~~~Wkdk~I~~~I~lg~P~ 236 (558)
...|+++|.+++++
T Consensus 121 --------------~~~v~~lil~~p~~ 134 (274)
T TIGR03100 121 --------------DLRVAGLVLLNPWV 134 (274)
T ss_pred --------------CCCccEEEEECCcc
Confidence 13599999997654
No 32
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=97.36 E-value=0.00047 Score=69.45 Aligned_cols=86 Identities=8% Similarity=-0.070 Sum_probs=58.2
Q ss_pred hHHHHHHHHHHHcCCc--cccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHHHHh
Q 008645 132 SVWKEWVKWCIEFGIE--ANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFLEWL 209 (558)
Q Consensus 132 ~~y~~li~~L~~~GY~--~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL~~~ 209 (558)
..|..+++.|.+ +|. .-|++|++..-+-. . ....+.+.+.+.++|++. .-+|++||||||||.++..+....
T Consensus 39 ~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~-~-~~~~~~~~~~~~~~i~~l---~~~~~~LvG~S~GG~va~~~a~~~ 112 (276)
T TIGR02240 39 ELVFPFIEALDP-DLEVIAFDVPGVGGSSTPR-H-PYRFPGLAKLAARMLDYL---DYGQVNAIGVSWGGALAQQFAHDY 112 (276)
T ss_pred HHHHHHHHHhcc-CceEEEECCCCCCCCCCCC-C-cCcHHHHHHHHHHHHHHh---CcCceEEEEECHHHHHHHHHHHHC
Confidence 478889998876 564 36888888764321 1 112344555555555543 224899999999999999887642
Q ss_pred hccCCCccchhhhhhhhceEEEecCCC
Q 008645 210 KLEIPPKQYIKWLDEHIHAYFAVGSPF 236 (558)
Q Consensus 210 ~~~~~~~~~~~Wkdk~I~~~I~lg~P~ 236 (558)
.+.|+++|.++++.
T Consensus 113 -------------p~~v~~lvl~~~~~ 126 (276)
T TIGR02240 113 -------------PERCKKLILAATAA 126 (276)
T ss_pred -------------HHHhhheEEeccCC
Confidence 13699999997765
No 33
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=97.35 E-value=0.00084 Score=66.27 Aligned_cols=87 Identities=9% Similarity=0.008 Sum_probs=55.2
Q ss_pred hHHHHHHHHHHHcCCc--cccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHHHHh
Q 008645 132 SVWKEWVKWCIEFGIE--ANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFLEWL 209 (558)
Q Consensus 132 ~~y~~li~~L~~~GY~--~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL~~~ 209 (558)
..|..+++.|.+ +|. .-|++|++..-+.. ......+.+.+.+.+++++. ..+|++|+||||||.++..+....
T Consensus 42 ~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~~l~~~i~~~---~~~~~~lvG~S~Gg~~a~~~a~~~ 116 (278)
T TIGR03056 42 HSWRDLMPPLAR-SFRVVAPDLPGHGFTRAPF-RFRFTLPSMAEDLSALCAAE---GLSPDGVIGHSAGAAIALRLALDG 116 (278)
T ss_pred HHHHHHHHHHhh-CcEEEeecCCCCCCCCCcc-ccCCCHHHHHHHHHHHHHHc---CCCCceEEEECccHHHHHHHHHhC
Confidence 468889998876 574 24666665532211 10112344556666665532 235899999999999999887642
Q ss_pred hccCCCccchhhhhhhhceEEEecCCC
Q 008645 210 KLEIPPKQYIKWLDEHIHAYFAVGSPF 236 (558)
Q Consensus 210 ~~~~~~~~~~~Wkdk~I~~~I~lg~P~ 236 (558)
. ..++++|.+++++
T Consensus 117 p-------------~~v~~~v~~~~~~ 130 (278)
T TIGR03056 117 P-------------VTPRMVVGINAAL 130 (278)
T ss_pred C-------------cccceEEEEcCcc
Confidence 1 2478999987764
No 34
>PRK03592 haloalkane dehalogenase; Provisional
Probab=97.34 E-value=0.00071 Score=68.75 Aligned_cols=87 Identities=10% Similarity=0.055 Sum_probs=60.3
Q ss_pred hhHHHHHHHHHHHcCC-ccccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHHHHh
Q 008645 131 SSVWKEWVKWCIEFGI-EANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFLEWL 209 (558)
Q Consensus 131 ~~~y~~li~~L~~~GY-~~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL~~~ 209 (558)
...|..+++.|.+.+- -.-|++|++..=+-... -..+.+.+++..++++. ...|++||||||||.++..+....
T Consensus 40 ~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~--~~~~~~a~dl~~ll~~l---~~~~~~lvGhS~Gg~ia~~~a~~~ 114 (295)
T PRK03592 40 SYLWRNIIPHLAGLGRCLAPDLIGMGASDKPDID--YTFADHARYLDAWFDAL---GLDDVVLVGHDWGSALGFDWAARH 114 (295)
T ss_pred HHHHHHHHHHHhhCCEEEEEcCCCCCCCCCCCCC--CCHHHHHHHHHHHHHHh---CCCCeEEEEECHHHHHHHHHHHhC
Confidence 3478899999988752 12477777665432211 13356677777777754 235899999999999998887642
Q ss_pred hccCCCccchhhhhhhhceEEEecCC
Q 008645 210 KLEIPPKQYIKWLDEHIHAYFAVGSP 235 (558)
Q Consensus 210 ~~~~~~~~~~~Wkdk~I~~~I~lg~P 235 (558)
...|+++|.++++
T Consensus 115 -------------p~~v~~lil~~~~ 127 (295)
T PRK03592 115 -------------PDRVRGIAFMEAI 127 (295)
T ss_pred -------------hhheeEEEEECCC
Confidence 1369999999874
No 35
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.31 E-value=0.00028 Score=80.47 Aligned_cols=70 Identities=13% Similarity=0.163 Sum_probs=50.8
Q ss_pred hhhHHHHHHHHHHHHHHHhc-CCc------EEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCCCc
Q 008645 167 ERDLYFHKLKLTFETALKLR-GGP------SLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGA 239 (558)
Q Consensus 167 ~~d~y~~~Lk~lIE~~~~~~-g~~------VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs 239 (558)
...+|..+--+.|-..|+.. ..+ |+||||||||.|||..+.. +.-++.-|..+|++|+|+.-.
T Consensus 154 dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tl----------kn~~~~sVntIITlssPH~a~ 223 (973)
T KOG3724|consen 154 DQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTL----------KNEVQGSVNTIITLSSPHAAP 223 (973)
T ss_pred HHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhh----------hhhccchhhhhhhhcCcccCC
Confidence 34456555555666666651 223 9999999999999988763 223456799999999999999
Q ss_pred hhhhhhh
Q 008645 240 TQSVKAT 246 (558)
Q Consensus 240 ~~al~~l 246 (558)
+.++...
T Consensus 224 Pl~~D~~ 230 (973)
T KOG3724|consen 224 PLPLDRF 230 (973)
T ss_pred CCCCcHH
Confidence 9887643
No 36
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=97.30 E-value=0.00074 Score=65.13 Aligned_cols=85 Identities=8% Similarity=-0.001 Sum_probs=55.2
Q ss_pred hHHHHHHHHHHHcCCc--cccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHHHHh
Q 008645 132 SVWKEWVKWCIEFGIE--ANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFLEWL 209 (558)
Q Consensus 132 ~~y~~li~~L~~~GY~--~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL~~~ 209 (558)
..|..+++.|.+ ||. .-|++|++..-+..... -..+++.+.+.+.|++. .-++++|+||||||.++..+....
T Consensus 27 ~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~-~~~~~~~~~~~~~i~~~---~~~~~~l~G~S~Gg~~a~~~a~~~ 101 (257)
T TIGR03611 27 SYWAPQLDVLTQ-RFHVVTYDHRGTGRSPGELPPG-YSIAHMADDVLQLLDAL---NIERFHFVGHALGGLIGLQLALRY 101 (257)
T ss_pred hHHHHHHHHHHh-ccEEEEEcCCCCCCCCCCCccc-CCHHHHHHHHHHHHHHh---CCCcEEEEEechhHHHHHHHHHHC
Confidence 367788888875 674 24666655443321111 13355666777777643 224899999999999999887642
Q ss_pred hccCCCccchhhhhhhhceEEEecC
Q 008645 210 KLEIPPKQYIKWLDEHIHAYFAVGS 234 (558)
Q Consensus 210 ~~~~~~~~~~~Wkdk~I~~~I~lg~ 234 (558)
...|+++|.+++
T Consensus 102 -------------~~~v~~~i~~~~ 113 (257)
T TIGR03611 102 -------------PERLLSLVLINA 113 (257)
T ss_pred -------------hHHhHHheeecC
Confidence 126899998864
No 37
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=97.28 E-value=0.0011 Score=64.72 Aligned_cols=86 Identities=16% Similarity=0.120 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHcCCc--cccceeecCCCCCCCch-hhhhhHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHHHHh
Q 008645 133 VWKEWVKWCIEFGIE--ANSIIAAPYDWRLSPSK-LEERDLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFLEWL 209 (558)
Q Consensus 133 ~y~~li~~L~~~GY~--~~~L~gapYDWRls~~~-~e~~d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL~~~ 209 (558)
.|..+...|.+.||. .-|++|++..-+..... .-..+.+.+++..++++. ..++++||||||||.++..++...
T Consensus 41 ~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~liG~S~Gg~ia~~~a~~~ 117 (288)
T TIGR01250 41 YLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKL---GLDKFYLLGHSWGGMLAQEYALKY 117 (288)
T ss_pred HHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHc---CCCcEEEEEeehHHHHHHHHHHhC
Confidence 566677777777985 35777765533211110 012244555555554432 224799999999999999888642
Q ss_pred hccCCCccchhhhhhhhceEEEecC
Q 008645 210 KLEIPPKQYIKWLDEHIHAYFAVGS 234 (558)
Q Consensus 210 ~~~~~~~~~~~Wkdk~I~~~I~lg~ 234 (558)
. ..|+++|.+++
T Consensus 118 p-------------~~v~~lvl~~~ 129 (288)
T TIGR01250 118 G-------------QHLKGLIISSM 129 (288)
T ss_pred c-------------cccceeeEecc
Confidence 1 35889987754
No 38
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=97.27 E-value=0.00041 Score=66.07 Aligned_cols=51 Identities=16% Similarity=0.197 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHhcCC-cEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCC
Q 008645 173 HKLKLTFETALKLRGG-PSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPF 236 (558)
Q Consensus 173 ~~Lk~lIE~~~~~~g~-~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~ 236 (558)
.++.+.++...+..|. ++++|||||||.++..++.... ++|+++|.++++.
T Consensus 28 ~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p-------------~~v~~lvl~~~~~ 79 (230)
T PF00561_consen 28 DDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYP-------------ERVKKLVLISPPP 79 (230)
T ss_dssp HHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSG-------------GGEEEEEEESESS
T ss_pred HHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCc-------------hhhcCcEEEeeec
Confidence 3445555555555554 7999999999999999987531 2799999998874
No 39
>PLN02872 triacylglycerol lipase
Probab=97.26 E-value=0.00036 Score=75.54 Aligned_cols=89 Identities=10% Similarity=0.050 Sum_probs=61.7
Q ss_pred HHHHHHHHcCCcc--ccceeecCCCCCC---Cchhh----hhhHHH-HHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHH
Q 008645 136 EWVKWCIEFGIEA--NSIIAAPYDWRLS---PSKLE----ERDLYF-HKLKLTFETALKLRGGPSLVLAHSLGNNVFRYF 205 (558)
Q Consensus 136 ~li~~L~~~GY~~--~~L~gapYDWRls---~~~~e----~~d~y~-~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~f 205 (558)
.+...|.+.||+. .|++|..|.++.. +...+ ..+++. .+|.++|+.+.+..+.|+++|||||||.++..+
T Consensus 98 sla~~La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~ 177 (395)
T PLN02872 98 SLGFILADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAA 177 (395)
T ss_pred chHHHHHhCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHH
Confidence 3666788999975 5899988776422 11110 223444 689999999887667799999999999999755
Q ss_pred HHHhhccCCCccchhhhhhhhceEEEecCC
Q 008645 206 LEWLKLEIPPKQYIKWLDEHIHAYFAVGSP 235 (558)
Q Consensus 206 L~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P 235 (558)
+.. ++ ..+.|+.++.+++.
T Consensus 178 ~~~----------p~-~~~~v~~~~~l~P~ 196 (395)
T PLN02872 178 LTQ----------PN-VVEMVEAAALLCPI 196 (395)
T ss_pred hhC----------hH-HHHHHHHHHHhcch
Confidence 532 12 23468888888555
No 40
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=97.20 E-value=0.0013 Score=65.65 Aligned_cols=83 Identities=8% Similarity=-0.005 Sum_probs=52.1
Q ss_pred HHHHHHHHcCCc--cccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHHHHhhccC
Q 008645 136 EWVKWCIEFGIE--ANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFLEWLKLEI 213 (558)
Q Consensus 136 ~li~~L~~~GY~--~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL~~~~~~~ 213 (558)
+.+..|.+.||. .-|++|++.+-+...... ....+.+.+.++++.. .-++++|+||||||.++..+....
T Consensus 51 ~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~-~~~~~~~~l~~~l~~l---~~~~~~lvG~S~Gg~ia~~~a~~~---- 122 (282)
T TIGR03343 51 RNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQ-RGLVNARAVKGLMDAL---DIEKAHLVGNSMGGATALNFALEY---- 122 (282)
T ss_pred HHHHHHHhCCCEEEEECCCCCCCCCCCcCccc-ccchhHHHHHHHHHHc---CCCCeeEEEECchHHHHHHHHHhC----
Confidence 445667777896 357777766543321111 0012344555555432 224899999999999999887642
Q ss_pred CCccchhhhhhhhceEEEecCC
Q 008645 214 PPKQYIKWLDEHIHAYFAVGSP 235 (558)
Q Consensus 214 ~~~~~~~Wkdk~I~~~I~lg~P 235 (558)
.+.|+++|.++++
T Consensus 123 ---------p~~v~~lvl~~~~ 135 (282)
T TIGR03343 123 ---------PDRIGKLILMGPG 135 (282)
T ss_pred ---------hHhhceEEEECCC
Confidence 1369999999865
No 41
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=97.07 E-value=0.0016 Score=73.10 Aligned_cols=92 Identities=14% Similarity=0.191 Sum_probs=69.1
Q ss_pred HHHHHHHHHcCCccccceeecCCCCCCCchhh--hhhHHHHHHHHHHHHHHHhcCC-cEEEEEeCCCcHHHHHHHHHhhc
Q 008645 135 KEWVKWCIEFGIEANSIIAAPYDWRLSPSKLE--ERDLYFHKLKLTFETALKLRGG-PSLVLAHSLGNNVFRYFLEWLKL 211 (558)
Q Consensus 135 ~~li~~L~~~GY~~~~L~gapYDWRls~~~~e--~~d~y~~~Lk~lIE~~~~~~g~-~VvLIaHSMGGlva~~fL~~~~~ 211 (558)
..+|++|.+.||+. +==|||-+-.... ..++|.+.+.+.|+.+.+..|. +|.++||||||.++...|..+..
T Consensus 237 ~SlVr~lv~qG~~V-----flIsW~nP~~~~r~~~ldDYv~~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA 311 (560)
T TIGR01839 237 KSFVQYCLKNQLQV-----FIISWRNPDKAHREWGLSTYVDALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQA 311 (560)
T ss_pred chHHHHHHHcCCeE-----EEEeCCCCChhhcCCCHHHHHHHHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHh
Confidence 67999999999972 3337886433322 3488999999999999988876 79999999999999876554432
Q ss_pred cCCCccchhhhhhhhceEEEecCCCCCc
Q 008645 212 EIPPKQYIKWLDEHIHAYFAVGSPFLGA 239 (558)
Q Consensus 212 ~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs 239 (558)
.. .++.|++++.+++|+--+
T Consensus 312 ~~--------~~~~V~sltllatplDf~ 331 (560)
T TIGR01839 312 LG--------QLRKVNSLTYLVSLLDST 331 (560)
T ss_pred cC--------CCCceeeEEeeecccccC
Confidence 10 123699999999998644
No 42
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=97.07 E-value=0.0018 Score=68.77 Aligned_cols=87 Identities=7% Similarity=0.055 Sum_probs=56.6
Q ss_pred hHHHHHHHHHHHcCCc--cccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHHHHh
Q 008645 132 SVWKEWVKWCIEFGIE--ANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFLEWL 209 (558)
Q Consensus 132 ~~y~~li~~L~~~GY~--~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL~~~ 209 (558)
..|..++..|.+ +|. .-|+.|++..-+..... -..+.+.+.+..+++.. ..+|++||||||||.++..+....
T Consensus 102 ~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~-~~~~~~a~~l~~~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~~ 176 (360)
T PLN02679 102 PHWRRNIGVLAK-NYTVYAIDLLGFGASDKPPGFS-YTMETWAELILDFLEEV---VQKPTVLIGNSVGSLACVIAASES 176 (360)
T ss_pred HHHHHHHHHHhc-CCEEEEECCCCCCCCCCCCCcc-ccHHHHHHHHHHHHHHh---cCCCeEEEEECHHHHHHHHHHHhc
Confidence 478899999876 785 35777777653321111 12244556666666532 235899999999999997665421
Q ss_pred hccCCCccchhhhhhhhceEEEecCC
Q 008645 210 KLEIPPKQYIKWLDEHIHAYFAVGSP 235 (558)
Q Consensus 210 ~~~~~~~~~~~Wkdk~I~~~I~lg~P 235 (558)
. ...|+++|.++++
T Consensus 177 ~------------P~rV~~LVLi~~~ 190 (360)
T PLN02679 177 T------------RDLVRGLVLLNCA 190 (360)
T ss_pred C------------hhhcCEEEEECCc
Confidence 0 1369999999765
No 43
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=97.04 E-value=0.0015 Score=62.02 Aligned_cols=80 Identities=16% Similarity=0.096 Sum_probs=49.9
Q ss_pred hhHHHHHHHHHHHcCCc--cccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHHHH
Q 008645 131 SSVWKEWVKWCIEFGIE--ANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFLEW 208 (558)
Q Consensus 131 ~~~y~~li~~L~~~GY~--~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL~~ 208 (558)
...|..+++.|.+ +|. .-|+.|++..-+.... .+..+++.+.+....|++||||||||.++..+...
T Consensus 17 ~~~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~~~~----------~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~ 85 (245)
T TIGR01738 17 AEVFRCLDEELSA-HFTLHLVDLPGHGRSRGFGPL----------SLADAAEAIAAQAPDPAIWLGWSLGGLVALHIAAT 85 (245)
T ss_pred hhhHHHHHHhhcc-CeEEEEecCCcCccCCCCCCc----------CHHHHHHHHHHhCCCCeEEEEEcHHHHHHHHHHHH
Confidence 3478888888864 564 2466665553222111 12333333333334689999999999999888764
Q ss_pred hhccCCCccchhhhhhhhceEEEecC
Q 008645 209 LKLEIPPKQYIKWLDEHIHAYFAVGS 234 (558)
Q Consensus 209 ~~~~~~~~~~~~Wkdk~I~~~I~lg~ 234 (558)
.. ..|+++|.+++
T Consensus 86 ~p-------------~~v~~~il~~~ 98 (245)
T TIGR01738 86 HP-------------DRVRALVTVAS 98 (245)
T ss_pred CH-------------HhhheeeEecC
Confidence 21 25899998854
No 44
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=97.04 E-value=0.0021 Score=72.18 Aligned_cols=90 Identities=17% Similarity=0.245 Sum_probs=58.8
Q ss_pred HHHHHHHHHcCCccccceeecCCCCCCCchh--hhhhHHHH-HHHHHHHHHHHhcCC-cEEEEEeCCCcHHHHHHHHHhh
Q 008645 135 KEWVKWCIEFGIEANSIIAAPYDWRLSPSKL--EERDLYFH-KLKLTFETALKLRGG-PSLVLAHSLGNNVFRYFLEWLK 210 (558)
Q Consensus 135 ~~li~~L~~~GY~~~~L~gapYDWRls~~~~--e~~d~y~~-~Lk~lIE~~~~~~g~-~VvLIaHSMGGlva~~fL~~~~ 210 (558)
+.+++.|.+.||+ .+-.|||-.-... -..++|.. .+...|+.+.+..|. ||+++||||||.++...|..+.
T Consensus 210 ~Slv~~L~~qGf~-----V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~a 284 (532)
T TIGR01838 210 NSLVRWLVEQGHT-----VFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLA 284 (532)
T ss_pred hHHHHHHHHCCcE-----EEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHH
Confidence 4799999999996 3445666321110 02356664 478888887776665 7999999999998644333221
Q ss_pred ccCCCccchhhhhhhhceEEEecCCCC
Q 008645 211 LEIPPKQYIKWLDEHIHAYFAVGSPFL 237 (558)
Q Consensus 211 ~~~~~~~~~~Wkdk~I~~~I~lg~P~~ 237 (558)
.. -.++.|+++|.+++|..
T Consensus 285 a~--------~~~~rv~slvll~t~~D 303 (532)
T TIGR01838 285 AR--------GDDKRIKSATFFTTLLD 303 (532)
T ss_pred Hh--------CCCCccceEEEEecCcC
Confidence 10 00236999999999864
No 45
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=97.01 E-value=0.0028 Score=56.62 Aligned_cols=79 Identities=9% Similarity=0.113 Sum_probs=54.3
Q ss_pred hHHHHHHHHHHHcCCccccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHH--hcCCcEEEEEeCCCcHHHHHHHHHh
Q 008645 132 SVWKEWVKWCIEFGIEANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALK--LRGGPSLVLAHSLGNNVFRYFLEWL 209 (558)
Q Consensus 132 ~~y~~li~~L~~~GY~~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~--~~g~~VvLIaHSMGGlva~~fL~~~ 209 (558)
..|..+.+.|.+.||.. +-.|+|...... -...+++.++.+.+ ..-.+++|+||||||.++..++..
T Consensus 13 ~~~~~~~~~l~~~G~~v-----~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~- 81 (145)
T PF12695_consen 13 RDYQPLAEALAEQGYAV-----VAFDYPGHGDSD-----GADAVERVLADIRAGYPDPDRIILIGHSMGGAIAANLAAR- 81 (145)
T ss_dssp HHHHHHHHHHHHTTEEE-----EEESCTTSTTSH-----HSHHHHHHHHHHHHHHCTCCEEEEEEETHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHCCCEE-----EEEecCCCCccc-----hhHHHHHHHHHHHhhcCCCCcEEEEEEccCcHHHHHHhhh-
Confidence 46889999999999952 223666543321 12355666665422 223489999999999999887763
Q ss_pred hccCCCccchhhhhhhhceEEEecC
Q 008645 210 KLEIPPKQYIKWLDEHIHAYFAVGS 234 (558)
Q Consensus 210 ~~~~~~~~~~~Wkdk~I~~~I~lg~ 234 (558)
+..|+++|++++
T Consensus 82 -------------~~~v~~~v~~~~ 93 (145)
T PF12695_consen 82 -------------NPRVKAVVLLSP 93 (145)
T ss_dssp -------------STTESEEEEESE
T ss_pred -------------ccceeEEEEecC
Confidence 136999999977
No 46
>PRK07868 acyl-CoA synthetase; Validated
Probab=97.00 E-value=0.0019 Score=77.68 Aligned_cols=84 Identities=14% Similarity=0.089 Sum_probs=57.9
Q ss_pred HHHHHHHcCCccccceeecCCCCCCCchh----hhhhHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHHHHhhcc
Q 008645 137 WVKWCIEFGIEANSIIAAPYDWRLSPSKL----EERDLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFLEWLKLE 212 (558)
Q Consensus 137 li~~L~~~GY~~~~L~gapYDWRls~~~~----e~~d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL~~~~~~ 212 (558)
+++.|.+.||+ .+-.||+.+.... ...++|...|.+.++.+.+..+.+|+||||||||.++..|.....
T Consensus 91 ~v~~L~~~g~~-----v~~~d~G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~~~v~lvG~s~GG~~a~~~aa~~~-- 163 (994)
T PRK07868 91 AVGILHRAGLD-----PWVIDFGSPDKVEGGMERNLADHVVALSEAIDTVKDVTGRDVHLVGYSQGGMFCYQAAAYRR-- 163 (994)
T ss_pred HHHHHHHCCCE-----EEEEcCCCCChhHcCccCCHHHHHHHHHHHHHHHHHhhCCceEEEEEChhHHHHHHHHHhcC--
Confidence 68999999986 2333677543221 133555556666666655556779999999999999987765311
Q ss_pred CCCccchhhhhhhhceEEEecCCCC
Q 008645 213 IPPKQYIKWLDEHIHAYFAVGSPFL 237 (558)
Q Consensus 213 ~~~~~~~~Wkdk~I~~~I~lg~P~~ 237 (558)
++.|+++|.+++|..
T Consensus 164 ----------~~~v~~lvl~~~~~d 178 (994)
T PRK07868 164 ----------SKDIASIVTFGSPVD 178 (994)
T ss_pred ----------CCccceEEEEecccc
Confidence 236999999999953
No 47
>PRK10673 acyl-CoA esterase; Provisional
Probab=96.99 E-value=0.0024 Score=62.64 Aligned_cols=82 Identities=10% Similarity=0.049 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHcCCc--cccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHHHHhh
Q 008645 133 VWKEWVKWCIEFGIE--ANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFLEWLK 210 (558)
Q Consensus 133 ~y~~li~~L~~~GY~--~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL~~~~ 210 (558)
.|..++..|.+ +|. .-|++|++-+=+. ... ...++.+++.+.|+.. ..++++||||||||.++..+.....
T Consensus 31 ~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~--~~~-~~~~~~~d~~~~l~~l---~~~~~~lvGhS~Gg~va~~~a~~~~ 103 (255)
T PRK10673 31 NLGVLARDLVN-DHDIIQVDMRNHGLSPRD--PVM-NYPAMAQDLLDTLDAL---QIEKATFIGHSMGGKAVMALTALAP 103 (255)
T ss_pred HHHHHHHHHhh-CCeEEEECCCCCCCCCCC--CCC-CHHHHHHHHHHHHHHc---CCCceEEEEECHHHHHHHHHHHhCH
Confidence 57888888865 463 2355444322111 111 2244555566655542 2348999999999999998876421
Q ss_pred ccCCCccchhhhhhhhceEEEecC
Q 008645 211 LEIPPKQYIKWLDEHIHAYFAVGS 234 (558)
Q Consensus 211 ~~~~~~~~~~Wkdk~I~~~I~lg~ 234 (558)
..|+++|.+++
T Consensus 104 -------------~~v~~lvli~~ 114 (255)
T PRK10673 104 -------------DRIDKLVAIDI 114 (255)
T ss_pred -------------hhcceEEEEec
Confidence 35999999854
No 48
>PRK13604 luxD acyl transferase; Provisional
Probab=96.90 E-value=0.0023 Score=67.10 Aligned_cols=66 Identities=11% Similarity=-0.032 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHcCCccccceeecCCCCCCCchhh------hhhHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHH
Q 008645 133 VWKEWVKWCIEFGIEANSIIAAPYDWRLSPSKLE------ERDLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFR 203 (558)
Q Consensus 133 ~y~~li~~L~~~GY~~~~L~gapYDWRls~~~~e------~~d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~ 203 (558)
.|..+++.|.+.||. ..-||+|....+++ .......++...|+.+.+....++.|+||||||.++.
T Consensus 52 ~~~~~A~~La~~G~~-----vLrfD~rg~~GeS~G~~~~~t~s~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~ 123 (307)
T PRK13604 52 HFAGLAEYLSSNGFH-----VIRYDSLHHVGLSSGTIDEFTMSIGKNSLLTVVDWLNTRGINNLGLIAASLSARIAY 123 (307)
T ss_pred HHHHHHHHHHHCCCE-----EEEecCCCCCCCCCCccccCcccccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHH
Confidence 489999999999995 34577764322110 0112346788888888765555899999999999973
No 49
>PRK03204 haloalkane dehalogenase; Provisional
Probab=96.89 E-value=0.0034 Score=64.21 Aligned_cols=86 Identities=7% Similarity=-0.059 Sum_probs=52.2
Q ss_pred hHHHHHHHHHHHcCCc--cccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHHHHh
Q 008645 132 SVWKEWVKWCIEFGIE--ANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFLEWL 209 (558)
Q Consensus 132 ~~y~~li~~L~~~GY~--~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL~~~ 209 (558)
..|..+++.|.+ +|. .-|++|++..=+...... ..+++.+.+..++++. .-++++|+||||||++++.+....
T Consensus 48 ~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~lvG~S~Gg~va~~~a~~~ 122 (286)
T PRK03204 48 FLYRDIIVALRD-RFRCVAPDYLGFGLSERPSGFGY-QIDEHARVIGEFVDHL---GLDRYLSMGQDWGGPISMAVAVER 122 (286)
T ss_pred HHHHHHHHHHhC-CcEEEEECCCCCCCCCCCCcccc-CHHHHHHHHHHHHHHh---CCCCEEEEEECccHHHHHHHHHhC
Confidence 468888988875 474 246666654322110000 1233444555555432 224899999999999998887642
Q ss_pred hccCCCccchhhhhhhhceEEEecCC
Q 008645 210 KLEIPPKQYIKWLDEHIHAYFAVGSP 235 (558)
Q Consensus 210 ~~~~~~~~~~~Wkdk~I~~~I~lg~P 235 (558)
...|+++|.++++
T Consensus 123 -------------p~~v~~lvl~~~~ 135 (286)
T PRK03204 123 -------------ADRVRGVVLGNTW 135 (286)
T ss_pred -------------hhheeEEEEECcc
Confidence 1369999977654
No 50
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=96.88 E-value=0.0048 Score=59.64 Aligned_cols=93 Identities=24% Similarity=0.312 Sum_probs=62.2
Q ss_pred hHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCCCchhhhhhhhc
Q 008645 169 DLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGATQSVKATLS 248 (558)
Q Consensus 169 d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs~~al~~lls 248 (558)
+++..+|.+.|.. ..+|++|||||+|++.+.+|+.... ..|++++.+++|.-+.++.......
T Consensus 44 ~dWi~~l~~~v~a----~~~~~vlVAHSLGc~~v~h~~~~~~-------------~~V~GalLVAppd~~~~~~~~~~~~ 106 (181)
T COG3545 44 DDWIARLEKEVNA----AEGPVVLVAHSLGCATVAHWAEHIQ-------------RQVAGALLVAPPDVSRPEIRPKHLM 106 (181)
T ss_pred HHHHHHHHHHHhc----cCCCeEEEEecccHHHHHHHHHhhh-------------hccceEEEecCCCccccccchhhcc
Confidence 4444444444332 3458999999999999999998642 3699999999999888654432222
Q ss_pred CCC--C--CCC-------------CchHHHHHHHhhcCccccccCCc
Q 008645 249 GET--S--GLP-------------VSEGTARLMFNSFGSSLWMMPFS 278 (558)
Q Consensus 249 G~~--~--glp-------------i~~~~~r~~~rs~pS~~~LLP~~ 278 (558)
... . -+| .+.+....+.+.|+|.+-.+...
T Consensus 107 tf~~~p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~wgs~lv~~g~~ 153 (181)
T COG3545 107 TFDPIPREPLPFPSVVVASRNDPYVSYEHAEDLANAWGSALVDVGEG 153 (181)
T ss_pred ccCCCccccCCCceeEEEecCCCCCCHHHHHHHHHhccHhheecccc
Confidence 211 0 111 13455678899999998888765
No 51
>PLN02578 hydrolase
Probab=96.82 E-value=0.0037 Score=66.04 Aligned_cols=85 Identities=9% Similarity=0.062 Sum_probs=55.5
Q ss_pred hHHHHHHHHHHHcCCc--cccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHHHHh
Q 008645 132 SVWKEWVKWCIEFGIE--ANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFLEWL 209 (558)
Q Consensus 132 ~~y~~li~~L~~~GY~--~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL~~~ 209 (558)
..|..++..|.+ +|. .-|+.|++..=+.... . ..+.+.+++..++++.. .+|++||||||||.++..+....
T Consensus 100 ~~w~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~~-~-~~~~~a~~l~~~i~~~~---~~~~~lvG~S~Gg~ia~~~A~~~ 173 (354)
T PLN02578 100 FHWRYNIPELAK-KYKVYALDLLGFGWSDKALIE-Y-DAMVWRDQVADFVKEVV---KEPAVLVGNSLGGFTALSTAVGY 173 (354)
T ss_pred HHHHHHHHHHhc-CCEEEEECCCCCCCCCCcccc-c-CHHHHHHHHHHHHHHhc---cCCeEEEEECHHHHHHHHHHHhC
Confidence 367788888864 574 2466666543221111 1 22445567777776553 46899999999999999888753
Q ss_pred hccCCCccchhhhhhhhceEEEecCC
Q 008645 210 KLEIPPKQYIKWLDEHIHAYFAVGSP 235 (558)
Q Consensus 210 ~~~~~~~~~~~Wkdk~I~~~I~lg~P 235 (558)
. ..|+++|.++++
T Consensus 174 p-------------~~v~~lvLv~~~ 186 (354)
T PLN02578 174 P-------------ELVAGVALLNSA 186 (354)
T ss_pred h-------------HhcceEEEECCC
Confidence 1 368999988654
No 52
>PRK05855 short chain dehydrogenase; Validated
Probab=96.70 E-value=0.0037 Score=69.13 Aligned_cols=91 Identities=13% Similarity=0.065 Sum_probs=57.3
Q ss_pred hHHHHHHHHHHHcCCc--cccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHHHHh
Q 008645 132 SVWKEWVKWCIEFGIE--ANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFLEWL 209 (558)
Q Consensus 132 ~~y~~li~~L~~~GY~--~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL~~~ 209 (558)
..|..+++.| ..||. ..|++|++..-+......-..+++.+++..+|+... ..+|++|+||||||.++..++...
T Consensus 39 ~~w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~l~--~~~~~~lvGhS~Gg~~a~~~a~~~ 115 (582)
T PRK05855 39 EVWDGVAPLL-ADRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDAVS--PDRPVHLLAHDWGSIQGWEAVTRP 115 (582)
T ss_pred HHHHHHHHHh-hcceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHHHhC--CCCcEEEEecChHHHHHHHHHhCc
Confidence 4688999999 56785 356777665443222111124567778888887542 234799999999999997766531
Q ss_pred hccCCCccchhhhhhhhceEEEecCCC
Q 008645 210 KLEIPPKQYIKWLDEHIHAYFAVGSPF 236 (558)
Q Consensus 210 ~~~~~~~~~~~Wkdk~I~~~I~lg~P~ 236 (558)
.....+..++.+++|.
T Consensus 116 -----------~~~~~v~~~~~~~~~~ 131 (582)
T PRK05855 116 -----------RAAGRIASFTSVSGPS 131 (582)
T ss_pred -----------cchhhhhhheeccCCc
Confidence 1123455566666654
No 53
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=96.65 E-value=0.0072 Score=67.20 Aligned_cols=88 Identities=13% Similarity=0.090 Sum_probs=52.4
Q ss_pred hHHHH-HHHHHHH---cCCc--cccceeecCCCCCCCchhhhhhHHHHHHH-HHHHHHHHhcC-CcEEEEEeCCCcHHHH
Q 008645 132 SVWKE-WVKWCIE---FGIE--ANSIIAAPYDWRLSPSKLEERDLYFHKLK-LTFETALKLRG-GPSLVLAHSLGNNVFR 203 (558)
Q Consensus 132 ~~y~~-li~~L~~---~GY~--~~~L~gapYDWRls~~~~e~~d~y~~~Lk-~lIE~~~~~~g-~~VvLIaHSMGGlva~ 203 (558)
..|.. ++..|.+ .+|. .-|++|++..-+.. ...-..+++.+.+. .+++ ..+ +|++|+||||||++++
T Consensus 215 ~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~-~~~ytl~~~a~~l~~~ll~----~lg~~k~~LVGhSmGG~iAl 289 (481)
T PLN03087 215 AFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPA-DSLYTLREHLEMIERSVLE----RYKVKSFHIVAHSLGCILAL 289 (481)
T ss_pred HHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCC-CCcCCHHHHHHHHHHHHHH----HcCCCCEEEEEECHHHHHHH
Confidence 35664 5566653 5775 24666655432211 11112234444442 3333 234 5899999999999999
Q ss_pred HHHHHhhccCCCccchhhhhhhhceEEEecCCCC
Q 008645 204 YFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFL 237 (558)
Q Consensus 204 ~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~ 237 (558)
++.... + ..|+++|.+++|..
T Consensus 290 ~~A~~~---------P----e~V~~LVLi~~~~~ 310 (481)
T PLN03087 290 ALAVKH---------P----GAVKSLTLLAPPYY 310 (481)
T ss_pred HHHHhC---------h----HhccEEEEECCCcc
Confidence 887642 1 26999999988754
No 54
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.63 E-value=0.0055 Score=56.87 Aligned_cols=66 Identities=17% Similarity=0.050 Sum_probs=45.9
Q ss_pred hHHHHHHHHHHHHHHHhcC-CcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCCCchhhh
Q 008645 169 DLYFHKLKLTFETALKLRG-GPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGATQSV 243 (558)
Q Consensus 169 d~y~~~Lk~lIE~~~~~~g-~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs~~al 243 (558)
......++.++++....+. .+++|+||||||-+|......+... ....+..++++++|-.|.....
T Consensus 8 ~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~---------~~~~~~~~~~fg~p~~~~~~~~ 74 (153)
T cd00741 8 RSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGR---------GLGRLVRVYTFGPPRVGNAAFA 74 (153)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhc---------cCCCceEEEEeCCCcccchHHH
Confidence 3345666777777665543 4899999999999998766555321 1234678999999988876543
No 55
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=96.63 E-value=0.0075 Score=65.16 Aligned_cols=89 Identities=8% Similarity=0.079 Sum_probs=62.5
Q ss_pred hhHHHHHHHHHHHcCCc--cccceeecCCCCCCCc--hhhhhhHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHH
Q 008645 131 SSVWKEWVKWCIEFGIE--ANSIIAAPYDWRLSPS--KLEERDLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFL 206 (558)
Q Consensus 131 ~~~y~~li~~L~~~GY~--~~~L~gapYDWRls~~--~~e~~d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL 206 (558)
...|..++..|.+ +|. .-|+.|++..-+-... ..-..+.+.+.|..++++. .-.+++||||||||.++.+|.
T Consensus 140 ~~~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l---~~~~~~LvG~s~GG~ia~~~a 215 (383)
T PLN03084 140 AYSYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDEL---KSDKVSLVVQGYFSPPVVKYA 215 (383)
T ss_pred HHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHh---CCCCceEEEECHHHHHHHHHH
Confidence 4579999999976 785 3588888776543211 0113456677777777654 224899999999999998887
Q ss_pred HHhhccCCCccchhhhhhhhceEEEecCCC
Q 008645 207 EWLKLEIPPKQYIKWLDEHIHAYFAVGSPF 236 (558)
Q Consensus 207 ~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~ 236 (558)
... .+.|+++|.+++|.
T Consensus 216 ~~~-------------P~~v~~lILi~~~~ 232 (383)
T PLN03084 216 SAH-------------PDKIKKLILLNPPL 232 (383)
T ss_pred HhC-------------hHhhcEEEEECCCC
Confidence 642 13699999998875
No 56
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=96.62 E-value=0.015 Score=58.55 Aligned_cols=60 Identities=18% Similarity=0.033 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHhc-CCcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecC
Q 008645 171 YFHKLKLTFETALKLR-GGPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGS 234 (558)
Q Consensus 171 y~~~Lk~lIE~~~~~~-g~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~ 234 (558)
....|.++|+...+.. .++|+|||||||+-+++..|+.+.... ...-....|..+|++++
T Consensus 75 s~~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~----~~~~~~~~~~~viL~Ap 135 (233)
T PF05990_consen 75 SGPALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEG----ERPDVKARFDNVILAAP 135 (233)
T ss_pred HHHHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcc----cchhhHhhhheEEEECC
Confidence 3466888888877763 458999999999999999999765321 10011236888887753
No 57
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=96.61 E-value=0.0066 Score=63.25 Aligned_cols=75 Identities=16% Similarity=0.113 Sum_probs=52.9
Q ss_pred hHHHHHHHHHHHcCCc--cccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHH--hc-CCcEEEEEeCCCcHHHHHHH
Q 008645 132 SVWKEWVKWCIEFGIE--ANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALK--LR-GGPSLVLAHSLGNNVFRYFL 206 (558)
Q Consensus 132 ~~y~~li~~L~~~GY~--~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~--~~-g~~VvLIaHSMGGlva~~fL 206 (558)
..|..+...|...||. +.|..|++-.=-+.. ....++..+.++...++.... .+ |.|.+|+||||||.|++.+-
T Consensus 69 ~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~-yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~ 147 (313)
T KOG1455|consen 69 WRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHA-YVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIA 147 (313)
T ss_pred hhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcc-cCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHH
Confidence 4688899999999996 346666655333222 233567777888888886543 33 56999999999999998654
Q ss_pred H
Q 008645 207 E 207 (558)
Q Consensus 207 ~ 207 (558)
.
T Consensus 148 ~ 148 (313)
T KOG1455|consen 148 L 148 (313)
T ss_pred h
Confidence 4
No 58
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=96.53 E-value=0.011 Score=63.90 Aligned_cols=88 Identities=14% Similarity=0.081 Sum_probs=49.5
Q ss_pred hhHHHHHHHHHHHcCCcc--ccceeecCCCCCCCc--hhhh-hhHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHH
Q 008645 131 SSVWKEWVKWCIEFGIEA--NSIIAAPYDWRLSPS--KLEE-RDLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYF 205 (558)
Q Consensus 131 ~~~y~~li~~L~~~GY~~--~~L~gapYDWRls~~--~~e~-~d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~f 205 (558)
...|...++.|.+ +|.. -|++|++..-|.... ..+. .+.+.+.+.++++. ..-.+++|+||||||.++..+
T Consensus 118 ~~~~~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~---l~~~~~~lvGhS~GG~la~~~ 193 (402)
T PLN02894 118 QGFFFRNFDALAS-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKA---KNLSNFILLGHSFGGYVAAKY 193 (402)
T ss_pred hhHHHHHHHHHHh-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHH---cCCCCeEEEEECHHHHHHHHH
Confidence 3467777888876 4742 455555543332111 0011 11223333333321 122489999999999999988
Q ss_pred HHHhhccCCCccchhhhhhhhceEEEecCC
Q 008645 206 LEWLKLEIPPKQYIKWLDEHIHAYFAVGSP 235 (558)
Q Consensus 206 L~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P 235 (558)
+.... ..|+++|.++++
T Consensus 194 a~~~p-------------~~v~~lvl~~p~ 210 (402)
T PLN02894 194 ALKHP-------------EHVQHLILVGPA 210 (402)
T ss_pred HHhCc-------------hhhcEEEEECCc
Confidence 76421 368999987543
No 59
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.35 E-value=0.0081 Score=54.27 Aligned_cols=64 Identities=13% Similarity=0.132 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHhcC-CcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCCCchhh
Q 008645 172 FHKLKLTFETALKLRG-GPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGATQS 242 (558)
Q Consensus 172 ~~~Lk~lIE~~~~~~g-~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs~~a 242 (558)
.+.+.+.|++..+.+. .++++.||||||-+|..+..++... .+.....-..++.|+|-.|..+.
T Consensus 47 ~~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~~~-------~~~~~~~~~~~~fg~P~~~~~~~ 111 (140)
T PF01764_consen 47 YDQILDALKELVEKYPDYSIVITGHSLGGALASLAAADLASH-------GPSSSSNVKCYTFGAPRVGNSAF 111 (140)
T ss_dssp HHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHHC-------TTTSTTTEEEEEES-S--BEHHH
T ss_pred HHHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhhhhc-------ccccccceeeeecCCccccCHHH
Confidence 3455555555555554 3799999999999998877665421 11112345677788887665543
No 60
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=96.29 E-value=0.012 Score=57.26 Aligned_cols=91 Identities=12% Similarity=0.050 Sum_probs=57.0
Q ss_pred hhHHHHHHHHHHHcCCccccceeecCCCCCCCch-hhhhhHHHHHHHHHHHHHHHhcCC-cEEEEEeCCCcHHHHHHHHH
Q 008645 131 SSVWKEWVKWCIEFGIEANSIIAAPYDWRLSPSK-LEERDLYFHKLKLTFETALKLRGG-PSLVLAHSLGNNVFRYFLEW 208 (558)
Q Consensus 131 ~~~y~~li~~L~~~GY~~~~L~gapYDWRls~~~-~e~~d~y~~~Lk~lIE~~~~~~g~-~VvLIaHSMGGlva~~fL~~ 208 (558)
...|..|++.|... ...+++..+.-+..... ....++ -....++++.+.... |.+|+|||+||.+|....+.
T Consensus 13 ~~~y~~la~~l~~~---~~~v~~i~~~~~~~~~~~~~si~~---la~~y~~~I~~~~~~gp~~L~G~S~Gg~lA~E~A~~ 86 (229)
T PF00975_consen 13 ASSYRPLARALPDD---VIGVYGIEYPGRGDDEPPPDSIEE---LASRYAEAIRARQPEGPYVLAGWSFGGILAFEMARQ 86 (229)
T ss_dssp GGGGHHHHHHHTTT---EEEEEEECSTTSCTTSHEESSHHH---HHHHHHHHHHHHTSSSSEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCC---eEEEEEEecCCCCCCCCCCCCHHH---HHHHHHHHhhhhCCCCCeeehccCccHHHHHHHHHH
Confidence 34789999998874 13466666666531111 111122 233444444444433 99999999999999988887
Q ss_pred hhccCCCccchhhhhhhhceEEEecCCCC
Q 008645 209 LKLEIPPKQYIKWLDEHIHAYFAVGSPFL 237 (558)
Q Consensus 209 ~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~ 237 (558)
++.. ...+..++.|.+|.-
T Consensus 87 Le~~----------G~~v~~l~liD~~~p 105 (229)
T PF00975_consen 87 LEEA----------GEEVSRLILIDSPPP 105 (229)
T ss_dssp HHHT----------T-SESEEEEESCSST
T ss_pred HHHh----------hhccCceEEecCCCC
Confidence 7532 235889999986653
No 61
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=96.27 E-value=0.012 Score=64.05 Aligned_cols=87 Identities=8% Similarity=0.086 Sum_probs=55.0
Q ss_pred hHHHHHHHHHHHcCCc--cccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHh---cCCcEEEEEeCCCcHHHHHHH
Q 008645 132 SVWKEWVKWCIEFGIE--ANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKL---RGGPSLVLAHSLGNNVFRYFL 206 (558)
Q Consensus 132 ~~y~~li~~L~~~GY~--~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~---~g~~VvLIaHSMGGlva~~fL 206 (558)
..|..+++.|.+.||. ..|++|.++.-+..... . ........++.+... ...++.|+||||||.++..+.
T Consensus 209 ~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~~--d---~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A 283 (414)
T PRK05077 209 DYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLTQ--D---SSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLA 283 (414)
T ss_pred hhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCccc--c---HHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHH
Confidence 4678889999999995 35777776643321110 1 111112334433332 234899999999999998665
Q ss_pred HHhhccCCCccchhhhhhhhceEEEecCCC
Q 008645 207 EWLKLEIPPKQYIKWLDEHIHAYFAVGSPF 236 (558)
Q Consensus 207 ~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~ 236 (558)
... ...|+++|+++++.
T Consensus 284 ~~~-------------p~ri~a~V~~~~~~ 300 (414)
T PRK05077 284 YLE-------------PPRLKAVACLGPVV 300 (414)
T ss_pred HhC-------------CcCceEEEEECCcc
Confidence 431 12599999998875
No 62
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=96.26 E-value=0.004 Score=59.86 Aligned_cols=53 Identities=19% Similarity=0.239 Sum_probs=35.9
Q ss_pred hHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCC
Q 008645 169 DLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFL 237 (558)
Q Consensus 169 d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~ 237 (558)
+.+...|++.|.. ..++++|||||+|++.+.+||.. . ..+.|++++.+|+|-.
T Consensus 40 ~~W~~~l~~~i~~----~~~~~ilVaHSLGc~~~l~~l~~-~-----------~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 40 DEWVQALDQAIDA----IDEPTILVAHSLGCLTALRWLAE-Q-----------SQKKVAGALLVAPFDP 92 (171)
T ss_dssp HHHHHHHHHCCHC-----TTTEEEEEETHHHHHHHHHHHH-T-----------CCSSEEEEEEES--SC
T ss_pred HHHHHHHHHHHhh----cCCCeEEEEeCHHHHHHHHHHhh-c-----------ccccccEEEEEcCCCc
Confidence 4455555555442 34579999999999999999951 1 1247999999977753
No 63
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.24 E-value=0.023 Score=58.52 Aligned_cols=51 Identities=16% Similarity=0.168 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHhcC---CcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCC
Q 008645 172 FHKLKLTFETALKLRG---GPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSP 235 (558)
Q Consensus 172 ~~~Lk~lIE~~~~~~g---~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P 235 (558)
.+.+.++|+.+.+..+ ++++||||||||.++..+...+. +.|+++|.|.+.
T Consensus 93 ~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~-------------~~v~~iv~LDPa 146 (275)
T cd00707 93 GAELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLN-------------GKLGRITGLDPA 146 (275)
T ss_pred HHHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhc-------------CccceeEEecCC
Confidence 3456777777665432 47999999999999987766531 259999999433
No 64
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=96.16 E-value=0.013 Score=61.58 Aligned_cols=85 Identities=13% Similarity=0.040 Sum_probs=54.0
Q ss_pred HHHHHHH---HHHHcCCc--cccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcCCc-EEEEEeCCCcHHHHHHH
Q 008645 133 VWKEWVK---WCIEFGIE--ANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRGGP-SLVLAHSLGNNVFRYFL 206 (558)
Q Consensus 133 ~y~~li~---~L~~~GY~--~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g~~-VvLIaHSMGGlva~~fL 206 (558)
.|..+++ .|...+|. .-|++|+.-.-... -...++.++|..++++. .-++ ++||||||||.|+..+.
T Consensus 84 ~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~~----~~~~~~a~dl~~ll~~l---~l~~~~~lvG~SmGG~vA~~~A 156 (343)
T PRK08775 84 WWEGLVGSGRALDPARFRLLAFDFIGADGSLDVP----IDTADQADAIALLLDAL---GIARLHAFVGYSYGALVGLQFA 156 (343)
T ss_pred cchhccCCCCccCccccEEEEEeCCCCCCCCCCC----CCHHHHHHHHHHHHHHc---CCCcceEEEEECHHHHHHHHHH
Confidence 4667775 46444674 35777654321111 12245677777777653 2224 57999999999999888
Q ss_pred HHhhccCCCccchhhhhhhhceEEEecCCCC
Q 008645 207 EWLKLEIPPKQYIKWLDEHIHAYFAVGSPFL 237 (558)
Q Consensus 207 ~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~ 237 (558)
.... ..|+++|.+++...
T Consensus 157 ~~~P-------------~~V~~LvLi~s~~~ 174 (343)
T PRK08775 157 SRHP-------------ARVRTLVVVSGAHR 174 (343)
T ss_pred HHCh-------------HhhheEEEECcccc
Confidence 7531 36999999977543
No 65
>PLN02606 palmitoyl-protein thioesterase
Probab=96.13 E-value=0.019 Score=60.10 Aligned_cols=41 Identities=27% Similarity=0.414 Sum_probs=35.3
Q ss_pred EEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCCCchh
Q 008645 190 SLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGATQ 241 (558)
Q Consensus 190 VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs~~ 241 (558)
+.+||+|-||+++|.+++++... --|+.+|++|+|+.|...
T Consensus 97 ~naIGfSQGglflRa~ierc~~~-----------p~V~nlISlggph~Gv~g 137 (306)
T PLN02606 97 YNIVAESQGNLVARGLIEFCDNA-----------PPVINYVSLGGPHAGVAA 137 (306)
T ss_pred eEEEEEcchhHHHHHHHHHCCCC-----------CCcceEEEecCCcCCccc
Confidence 89999999999999999987420 149999999999998765
No 66
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=96.11 E-value=0.022 Score=59.50 Aligned_cols=86 Identities=9% Similarity=-0.033 Sum_probs=52.0
Q ss_pred hhHHHHHHHHHHHcCCc--cccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEeCCCcHHHHHHHH
Q 008645 131 SSVWKEWVKWCIEFGIE--ANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRG-GPSLVLAHSLGNNVFRYFLE 207 (558)
Q Consensus 131 ~~~y~~li~~L~~~GY~--~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g-~~VvLIaHSMGGlva~~fL~ 207 (558)
...|..+++.|.+. |. ..|+++++..-+... ....+.+.+.+..+++ ..+ .+++|+||||||.++..+..
T Consensus 144 ~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~--~~~~~~~~~~~~~~~~----~~~~~~~~lvG~S~Gg~~a~~~a~ 216 (371)
T PRK14875 144 LNNWLFNHAALAAG-RPVIALDLPGHGASSKAVG--AGSLDELAAAVLAFLD----ALGIERAHLVGHSMGGAVALRLAA 216 (371)
T ss_pred cchHHHHHHHHhcC-CEEEEEcCCCCCCCCCCCC--CCCHHHHHHHHHHHHH----hcCCccEEEEeechHHHHHHHHHH
Confidence 34688888888764 74 245555543211111 1122334444444443 344 48999999999999987776
Q ss_pred HhhccCCCccchhhhhhhhceEEEecCCC
Q 008645 208 WLKLEIPPKQYIKWLDEHIHAYFAVGSPF 236 (558)
Q Consensus 208 ~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~ 236 (558)
... ..|+++|.++++-
T Consensus 217 ~~~-------------~~v~~lv~~~~~~ 232 (371)
T PRK14875 217 RAP-------------QRVASLTLIAPAG 232 (371)
T ss_pred hCc-------------hheeEEEEECcCC
Confidence 421 2589999997653
No 67
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=96.10 E-value=0.062 Score=54.80 Aligned_cols=125 Identities=15% Similarity=0.160 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHcCCccccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcC-----CcEEEEEeCCCcHHHHHHHH
Q 008645 133 VWKEWVKWCIEFGIEANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRG-----GPSLVLAHSLGNNVFRYFLE 207 (558)
Q Consensus 133 ~y~~li~~L~~~GY~~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g-----~~VvLIaHSMGGlva~~fL~ 207 (558)
.|..+++.|.+.||. +++.||.. +.++...-++-.++.+..++...+..+ .|+.=||||||+.+-.-.-.
T Consensus 35 tYr~lLe~La~~Gy~---ViAtPy~~--tfDH~~~A~~~~~~f~~~~~~L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s 109 (250)
T PF07082_consen 35 TYRYLLERLADRGYA---VIATPYVV--TFDHQAIAREVWERFERCLRALQKRGGLDPAYLPVYGVGHSLGCKLHLLIGS 109 (250)
T ss_pred HHHHHHHHHHhCCcE---EEEEecCC--CCcHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCeeeeecccchHHHHHHhh
Confidence 799999999999995 78899965 344432223334444444444444332 37888999999998754322
Q ss_pred HhhccCCCccchhhhhhhhceEEEecCCCCCchhhhhhhhcCCC-CC---CCCchHHHHHHHhhcCcccccc
Q 008645 208 WLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGATQSVKATLSGET-SG---LPVSEGTARLMFNSFGSSLWMM 275 (558)
Q Consensus 208 ~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs~~al~~llsG~~-~g---lpi~~~~~r~~~rs~pS~~~LL 275 (558)
... ...++-|.|+--..++.+++..+-.-.. +. .|-+....+-+.+++....-||
T Consensus 110 ~~~-------------~~r~gniliSFNN~~a~~aIP~~~~l~~~l~~EF~PsP~ET~~li~~~Y~~~rnLL 168 (250)
T PF07082_consen 110 LFD-------------VERAGNILISFNNFPADEAIPLLEQLAPALRLEFTPSPEETRRLIRESYQVRRNLL 168 (250)
T ss_pred hcc-------------CcccceEEEecCChHHHhhCchHhhhccccccCccCCHHHHHHHHHHhcCCccceE
Confidence 211 1135678888888888888765422111 11 2323334455566554444443
No 68
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=96.09 E-value=0.019 Score=63.20 Aligned_cols=72 Identities=14% Similarity=0.036 Sum_probs=45.8
Q ss_pred cceeecCCCCCCCch-----hhhhhHHHHHHHHHHHHHHHhcC---CcEEEEEeCCCcHHHHHHHHHhhccCCCccchhh
Q 008645 150 SIIAAPYDWRLSPSK-----LEERDLYFHKLKLTFETALKLRG---GPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKW 221 (558)
Q Consensus 150 ~L~gapYDWRls~~~-----~e~~d~y~~~Lk~lIE~~~~~~g---~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~W 221 (558)
+......|||..-.. ..........+.++|+.+.+..+ .+|+||||||||.++.++.....
T Consensus 73 d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p----------- 141 (442)
T TIGR03230 73 SANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTK----------- 141 (442)
T ss_pred CCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCC-----------
Confidence 345567788731110 01112344567778877654433 48999999999999988765431
Q ss_pred hhhhhceEEEecC
Q 008645 222 LDEHIHAYFAVGS 234 (558)
Q Consensus 222 kdk~I~~~I~lg~ 234 (558)
..|.+++.|.+
T Consensus 142 --~rV~rItgLDP 152 (442)
T TIGR03230 142 --HKVNRITGLDP 152 (442)
T ss_pred --cceeEEEEEcC
Confidence 25899998854
No 69
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=96.07 E-value=0.02 Score=59.21 Aligned_cols=72 Identities=7% Similarity=-0.063 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHcCCccccceeecCCCCCC------CchhhhhhHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHH
Q 008645 133 VWKEWVKWCIEFGIEANSIIAAPYDWRLS------PSKLEERDLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFL 206 (558)
Q Consensus 133 ~y~~li~~L~~~GY~~~~L~gapYDWRls------~~~~e~~d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL 206 (558)
.|+.+...|... -..+....|-|-- +..--+.+.+..++-.+|+++|...--+|+||||||||-++-|+.
T Consensus 89 SfA~~a~el~s~----~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a 164 (343)
T KOG2564|consen 89 SFAIFASELKSK----IRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTA 164 (343)
T ss_pred hHHHHHHHHHhh----cceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccCCCceEEEeccccchhhhhhh
Confidence 355666666542 1233455566631 111013355667777888888865555899999999999998877
Q ss_pred HH
Q 008645 207 EW 208 (558)
Q Consensus 207 ~~ 208 (558)
..
T Consensus 165 ~~ 166 (343)
T KOG2564|consen 165 AS 166 (343)
T ss_pred hh
Confidence 63
No 70
>PLN02633 palmitoyl protein thioesterase family protein
Probab=96.01 E-value=0.009 Score=62.60 Aligned_cols=56 Identities=21% Similarity=0.337 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCCCchh
Q 008645 170 LYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGATQ 241 (558)
Q Consensus 170 ~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs~~ 241 (558)
..-++|++ ++++. +| +++||||.||+++|.+++++... -.|+.+|++|+|+.|...
T Consensus 81 ~vce~l~~-~~~l~--~G--~naIGfSQGGlflRa~ierc~~~-----------p~V~nlISlggph~Gv~g 136 (314)
T PLN02633 81 IACEKVKQ-MKELS--QG--YNIVGRSQGNLVARGLIEFCDGG-----------PPVYNYISLAGPHAGISS 136 (314)
T ss_pred HHHHHHhh-chhhh--Cc--EEEEEEccchHHHHHHHHHCCCC-----------CCcceEEEecCCCCCeeC
Confidence 34455555 33321 23 99999999999999999987420 149999999999988655
No 71
>PLN00021 chlorophyllase
Probab=96.01 E-value=0.022 Score=59.88 Aligned_cols=93 Identities=13% Similarity=0.071 Sum_probs=50.5
Q ss_pred hHHHHHHHHHHHcCCcc--ccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHH--------hcCCcEEEEEeCCCcHH
Q 008645 132 SVWKEWVKWCIEFGIEA--NSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALK--------LRGGPSLVLAHSLGNNV 201 (558)
Q Consensus 132 ~~y~~li~~L~~~GY~~--~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~--------~~g~~VvLIaHSMGGlv 201 (558)
..|..+++.|.+.||.. -|+++ +. ........+. ..++...+.+..+ .+-.++.|+||||||.+
T Consensus 66 ~~y~~l~~~Las~G~~VvapD~~g----~~-~~~~~~~i~d-~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~i 139 (313)
T PLN00021 66 SFYSQLLQHIASHGFIVVAPQLYT----LA-GPDGTDEIKD-AAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKT 139 (313)
T ss_pred ccHHHHHHHHHhCCCEEEEecCCC----cC-CCCchhhHHH-HHHHHHHHHhhhhhhcccccccChhheEEEEECcchHH
Confidence 36889999999999952 23332 11 1111111111 2222233332211 11247999999999999
Q ss_pred HHHHHHHhhccCCCccchhhhhhhhceEEEecCCCCCc
Q 008645 202 FRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGA 239 (558)
Q Consensus 202 a~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs 239 (558)
+..+..... .......++++|.+ .|+.|.
T Consensus 140 A~~lA~~~~--------~~~~~~~v~ali~l-dPv~g~ 168 (313)
T PLN00021 140 AFALALGKA--------AVSLPLKFSALIGL-DPVDGT 168 (313)
T ss_pred HHHHHhhcc--------ccccccceeeEEee-cccccc
Confidence 987765321 11112358889988 565554
No 72
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=95.89 E-value=0.01 Score=61.55 Aligned_cols=41 Identities=17% Similarity=0.321 Sum_probs=31.0
Q ss_pred cEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCCCchh
Q 008645 189 PSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGATQ 241 (558)
Q Consensus 189 ~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs~~ 241 (558)
=+++||+|-||+++|.+++++.. ..|+.+|++|+|+.|...
T Consensus 81 G~~~IGfSQGgl~lRa~vq~c~~------------~~V~nlISlggph~Gv~g 121 (279)
T PF02089_consen 81 GFNAIGFSQGGLFLRAYVQRCND------------PPVHNLISLGGPHMGVFG 121 (279)
T ss_dssp -EEEEEETCHHHHHHHHHHH-TS------------S-EEEEEEES--TT-BSS
T ss_pred ceeeeeeccccHHHHHHHHHCCC------------CCceeEEEecCccccccc
Confidence 38999999999999999998742 259999999999988654
No 73
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=95.88 E-value=0.015 Score=59.89 Aligned_cols=79 Identities=10% Similarity=-0.100 Sum_probs=44.8
Q ss_pred HHHHcCCc--cccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEeCCCcHHHHHHHHHhhccCCCc
Q 008645 140 WCIEFGIE--ANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRG-GPSLVLAHSLGNNVFRYFLEWLKLEIPPK 216 (558)
Q Consensus 140 ~L~~~GY~--~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g-~~VvLIaHSMGGlva~~fL~~~~~~~~~~ 216 (558)
.+...+|. .-|++|++..-..........+++.+++..+++ ..+ .+++|+||||||.++..++....
T Consensus 48 ~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~----~l~~~~~~lvG~S~GG~ia~~~a~~~p------ 117 (306)
T TIGR01249 48 FFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKLRE----KLGIKNWLVFGGSWGSTLALAYAQTHP------ 117 (306)
T ss_pred ccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHH----HcCCCCEEEEEECHHHHHHHHHHHHCh------
Confidence 33345674 246666654321111000112334444444443 333 47999999999999998876531
Q ss_pred cchhhhhhhhceEEEecCC
Q 008645 217 QYIKWLDEHIHAYFAVGSP 235 (558)
Q Consensus 217 ~~~~Wkdk~I~~~I~lg~P 235 (558)
+.|+++|.+++.
T Consensus 118 -------~~v~~lvl~~~~ 129 (306)
T TIGR01249 118 -------EVVTGLVLRGIF 129 (306)
T ss_pred -------Hhhhhheeeccc
Confidence 358899988543
No 74
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=95.80 E-value=0.02 Score=58.44 Aligned_cols=59 Identities=17% Similarity=0.140 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHHhcCC-cEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCC
Q 008645 171 YFHKLKLTFETALKLRGG-PSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFL 237 (558)
Q Consensus 171 y~~~Lk~lIE~~~~~~g~-~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~ 237 (558)
+..-||..++...++++- ++.+|||||||+-+-+||..++.+ +..+ -++.+|+|++||-
T Consensus 118 ~s~wlk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~d---ks~P-----~lnK~V~l~gpfN 177 (288)
T COG4814 118 QSKWLKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDD---KSLP-----PLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCC---CCCc-----chhheEEeccccc
Confidence 455688888888888886 699999999999999999876532 1111 4789999999983
No 75
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=95.55 E-value=0.042 Score=57.90 Aligned_cols=88 Identities=11% Similarity=0.199 Sum_probs=60.7
Q ss_pred hHHHHHHHHHHHcCCcc--ccceeecCCCCCCCchhh--hhhHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHHH
Q 008645 132 SVWKEWVKWCIEFGIEA--NSIIAAPYDWRLSPSKLE--ERDLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFLE 207 (558)
Q Consensus 132 ~~y~~li~~L~~~GY~~--~~L~gapYDWRls~~~~e--~~d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL~ 207 (558)
..|...+..|...||+. -|++|+...= +|...+ ..+....++..+|+.. ...|++|+||+||++|+-++..
T Consensus 58 yswr~q~~~la~~~~rviA~DlrGyG~Sd--~P~~~~~Yt~~~l~~di~~lld~L---g~~k~~lvgHDwGaivaw~la~ 132 (322)
T KOG4178|consen 58 YSWRHQIPGLASRGYRVIAPDLRGYGFSD--APPHISEYTIDELVGDIVALLDHL---GLKKAFLVGHDWGAIVAWRLAL 132 (322)
T ss_pred hhhhhhhhhhhhcceEEEecCCCCCCCCC--CCCCcceeeHHHHHHHHHHHHHHh---ccceeEEEeccchhHHHHHHHH
Confidence 37899999999999963 5777665433 333321 1233344455555433 1348999999999999988776
Q ss_pred HhhccCCCccchhhhhhhhceEEEecCCCC
Q 008645 208 WLKLEIPPKQYIKWLDEHIHAYFAVGSPFL 237 (558)
Q Consensus 208 ~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~ 237 (558)
... ..|+++|++..|+.
T Consensus 133 ~~P-------------erv~~lv~~nv~~~ 149 (322)
T KOG4178|consen 133 FYP-------------ERVDGLVTLNVPFP 149 (322)
T ss_pred hCh-------------hhcceEEEecCCCC
Confidence 542 36999999999986
No 76
>PRK11071 esterase YqiA; Provisional
Probab=95.45 E-value=0.094 Score=50.89 Aligned_cols=60 Identities=15% Similarity=0.093 Sum_probs=35.0
Q ss_pred HHHHHHHHcCCccccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEeCCCcHHHHHHHHH
Q 008645 136 EWVKWCIEFGIEANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRG-GPSLVLAHSLGNNVFRYFLEW 208 (558)
Q Consensus 136 ~li~~L~~~GY~~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g-~~VvLIaHSMGGlva~~fL~~ 208 (558)
.+.+.|.+.+.. .....+|+|.-+ +++.+.+.++++ ..+ ++++|+||||||.++.++...
T Consensus 21 ~~~~~l~~~~~~---~~v~~~dl~g~~------~~~~~~l~~l~~----~~~~~~~~lvG~S~Gg~~a~~~a~~ 81 (190)
T PRK11071 21 LLKNWLAQHHPD---IEMIVPQLPPYP------ADAAELLESLVL----EHGGDPLGLVGSSLGGYYATWLSQC 81 (190)
T ss_pred HHHHHHHHhCCC---CeEEeCCCCCCH------HHHHHHHHHHHH----HcCCCCeEEEEECHHHHHHHHHHHH
Confidence 355667664321 123455555321 123444444444 333 489999999999999887764
No 77
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=95.43 E-value=0.026 Score=59.39 Aligned_cols=50 Identities=16% Similarity=0.119 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHhcC-Cc-EEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCC
Q 008645 170 LYFHKLKLTFETALKLRG-GP-SLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPF 236 (558)
Q Consensus 170 ~y~~~Lk~lIE~~~~~~g-~~-VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~ 236 (558)
++.+.+.+++++. | .+ ++|+||||||.+++.+..... ..|+++|.++++.
T Consensus 111 ~~~~~~~~~~~~l----~~~~~~~l~G~S~Gg~ia~~~a~~~p-------------~~v~~lvl~~~~~ 162 (351)
T TIGR01392 111 DDVKAQKLLLDHL----GIEQIAAVVGGSMGGMQALEWAIDYP-------------ERVRAIVVLATSA 162 (351)
T ss_pred HHHHHHHHHHHHc----CCCCceEEEEECHHHHHHHHHHHHCh-------------HhhheEEEEccCC
Confidence 4556666666532 3 35 999999999999998876421 3699999998765
No 78
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=95.36 E-value=0.028 Score=57.75 Aligned_cols=42 Identities=17% Similarity=0.289 Sum_probs=36.1
Q ss_pred cEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCCCchhh
Q 008645 189 PSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGATQS 242 (558)
Q Consensus 189 ~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs~~a 242 (558)
=+.+||-|.|||++|..++++.. ..|+.+|++|+|+.|....
T Consensus 93 Gynivg~SQGglv~Raliq~cd~------------ppV~n~ISL~gPhaG~~~~ 134 (296)
T KOG2541|consen 93 GYNIVGYSQGGLVARALIQFCDN------------PPVKNFISLGGPHAGIYGI 134 (296)
T ss_pred ceEEEEEccccHHHHHHHHhCCC------------CCcceeEeccCCcCCccCC
Confidence 48999999999999999998753 2599999999999886554
No 79
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.25 E-value=0.045 Score=54.15 Aligned_cols=64 Identities=20% Similarity=0.239 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHhcC-CcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCCCchhhh
Q 008645 171 YFHKLKLTFETALKLRG-GPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGATQSV 243 (558)
Q Consensus 171 y~~~Lk~lIE~~~~~~g-~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs~~al 243 (558)
...++...++++.+++. .++++.||||||.+|..+...+... ... ..-..++.|+|-.|.....
T Consensus 110 ~~~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~--------~~~-~~i~~~tFg~P~vg~~~~a 174 (229)
T cd00519 110 LYNQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRLR--------GPG-SDVTVYTFGQPRVGNAAFA 174 (229)
T ss_pred HHHHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhh--------CCC-CceEEEEeCCCCCCCHHHH
Confidence 34445555665655553 4899999999999998766554321 011 2245777888887775543
No 80
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=95.18 E-value=0.045 Score=57.41 Aligned_cols=90 Identities=11% Similarity=0.044 Sum_probs=57.4
Q ss_pred hHHHHHHHHHHHcCCcc--ccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhc-----CCcEEEEEeCCCcHHHHH
Q 008645 132 SVWKEWVKWCIEFGIEA--NSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLR-----GGPSLVLAHSLGNNVFRY 204 (558)
Q Consensus 132 ~~y~~li~~L~~~GY~~--~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~-----g~~VvLIaHSMGGlva~~ 204 (558)
.|...|++.|...||.- ..|...-..|-.+- .++-.++|.++|+...... -+||||+|||=|+.-+.+
T Consensus 50 pY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~S-----L~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~ 124 (303)
T PF08538_consen 50 PYLPDLAEALEETGWSLFQVQLSSSYSGWGTSS-----LDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLH 124 (303)
T ss_dssp TCHHHHHHHHT-TT-EEEEE--GGGBTTS-S-------HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHH
T ss_pred chHHHHHHHhccCCeEEEEEEecCccCCcCcch-----hhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHH
Confidence 36788999999889953 23444444676442 2344789999999887763 248999999999999999
Q ss_pred HHHHhhccCCCccchhhhhhhhceEEEecC
Q 008645 205 FLEWLKLEIPPKQYIKWLDEHIHAYFAVGS 234 (558)
Q Consensus 205 fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~ 234 (558)
||...... . ....|++.|+-|+
T Consensus 125 Yl~~~~~~------~--~~~~VdG~ILQAp 146 (303)
T PF08538_consen 125 YLSSPNPS------P--SRPPVDGAILQAP 146 (303)
T ss_dssp HHHH-TT-----------CCCEEEEEEEEE
T ss_pred HHhccCcc------c--cccceEEEEEeCC
Confidence 99864310 0 1346899987643
No 81
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=95.09 E-value=0.043 Score=58.07 Aligned_cols=89 Identities=20% Similarity=0.263 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHc-CCc--cccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCcHHHHHHHHH
Q 008645 133 VWKEWVKWCIEF-GIE--ANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLR-GGPSLVLAHSLGNNVFRYFLEW 208 (558)
Q Consensus 133 ~y~~li~~L~~~-GY~--~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~-g~~VvLIaHSMGGlva~~fL~~ 208 (558)
.|..++..|.+. |+. .-|+.|.+|.=.+++... + +......+|+...... ..|++||||||||+++..+-..
T Consensus 73 ~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~--y--~~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~ 148 (326)
T KOG1454|consen 73 SWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPL--Y--TLRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAY 148 (326)
T ss_pred cHhhhccccccccceEEEEEecCCCCcCCCCCCCCc--e--ehhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHh
Confidence 455666666643 453 468888887444343321 1 1222333333333333 4589999999999999877664
Q ss_pred hhccCCCccchhhhhhhhceEE---EecCCCCC
Q 008645 209 LKLEIPPKQYIKWLDEHIHAYF---AVGSPFLG 238 (558)
Q Consensus 209 ~~~~~~~~~~~~Wkdk~I~~~I---~lg~P~~G 238 (558)
.- .-|+.+| .+++|...
T Consensus 149 ~P-------------~~V~~lv~~~~~~~~~~~ 168 (326)
T KOG1454|consen 149 YP-------------ETVDSLVLLDLLGPPVYS 168 (326)
T ss_pred Cc-------------ccccceeeeccccccccc
Confidence 21 2588888 55555443
No 82
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=94.86 E-value=0.081 Score=57.74 Aligned_cols=97 Identities=12% Similarity=0.081 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHcCCccccceeecCCCCCCCch---hh--hhhHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHHH
Q 008645 133 VWKEWVKWCIEFGIEANSIIAAPYDWRLSPSK---LE--ERDLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFLE 207 (558)
Q Consensus 133 ~y~~li~~L~~~GY~~~~L~gapYDWRls~~~---~e--~~d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL~ 207 (558)
.-..+|++|.+ |++ ++- =||+-+... .. ..++|...|.+.|+.+ |.+++|+|.+|||..+..++.
T Consensus 118 L~RS~V~~Ll~-g~d---VYl--~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~----G~~v~l~GvCqgG~~~laa~A 187 (406)
T TIGR01849 118 LLRSTVEALLP-DHD---VYI--TDWVNARMVPLSAGKFDLEDYIDYLIEFIRFL----GPDIHVIAVCQPAVPVLAAVA 187 (406)
T ss_pred HHHHHHHHHhC-CCc---EEE--EeCCCCCCCchhcCCCCHHHHHHHHHHHHHHh----CCCCcEEEEchhhHHHHHHHH
Confidence 35678888888 876 222 278765422 11 3377876666666544 667999999999999998888
Q ss_pred HhhccCCCccchhhhhhhhceEEEecCCCCCch--hhhhhhh
Q 008645 208 WLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGAT--QSVKATL 247 (558)
Q Consensus 208 ~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs~--~al~~ll 247 (558)
.+..... ...|++++.+++|.--.. ..+..++
T Consensus 188 l~a~~~~--------p~~~~sltlm~~PID~~~~p~~v~~~a 221 (406)
T TIGR01849 188 LMAENEP--------PAQPRSMTLMGGPIDARASPTVVNELA 221 (406)
T ss_pred HHHhcCC--------CCCcceEEEEecCccCCCCCchHHHHh
Confidence 7643210 014999999999975433 3444443
No 83
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=94.86 E-value=0.048 Score=58.22 Aligned_cols=56 Identities=25% Similarity=0.357 Sum_probs=42.9
Q ss_pred CC-cEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCCCchhhh---hhhhcCC
Q 008645 187 GG-PSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGATQSV---KATLSGE 250 (558)
Q Consensus 187 g~-~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs~~al---~~llsG~ 250 (558)
|+ ||.|||||||+-++.+.|+.+... =....|+.+|.+|+|...+.+.. +...+|.
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~--------~~~~lVe~VvL~Gapv~~~~~~W~~~r~vVsGr 277 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAER--------KAFGLVENVVLMGAPVPSDPEEWRKIRSVVSGR 277 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhc--------cccCeEeeEEEecCCCCCCHHHHHHHHHHccCe
Confidence 54 999999999999999999876421 01125899999999998887764 4556665
No 84
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=94.82 E-value=0.13 Score=54.92 Aligned_cols=88 Identities=16% Similarity=0.063 Sum_probs=52.3
Q ss_pred HHHHHHcCCc--cccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcCC-cEEEEEeCCCcHHHHHHHHHhhccCC
Q 008645 138 VKWCIEFGIE--ANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRGG-PSLVLAHSLGNNVFRYFLEWLKLEIP 214 (558)
Q Consensus 138 i~~L~~~GY~--~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g~-~VvLIaHSMGGlva~~fL~~~~~~~~ 214 (558)
.+.|.+ ... ..|+.|++-.-|=......... -...-+-||+=.+..|- |.+||||||||-++..|....
T Consensus 110 f~~La~-~~~vyaiDllG~G~SSRP~F~~d~~~~--e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKy----- 181 (365)
T KOG4409|consen 110 FDDLAK-IRNVYAIDLLGFGRSSRPKFSIDPTTA--EKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKY----- 181 (365)
T ss_pred hhhhhh-cCceEEecccCCCCCCCCCCCCCcccc--hHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhC-----
Confidence 455555 222 3578888877774332210000 01233445555556665 899999999999987776542
Q ss_pred CccchhhhhhhhceEEEecCCCCCchhh
Q 008645 215 PKQYIKWLDEHIHAYFAVGSPFLGATQS 242 (558)
Q Consensus 215 ~~~~~~Wkdk~I~~~I~lg~P~~Gs~~a 242 (558)
| +.|+++|.+ .||+=.-+.
T Consensus 182 P--------erV~kLiLv-sP~Gf~~~~ 200 (365)
T KOG4409|consen 182 P--------ERVEKLILV-SPWGFPEKP 200 (365)
T ss_pred h--------HhhceEEEe-cccccccCC
Confidence 1 259999955 888444433
No 85
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=94.80 E-value=0.035 Score=57.08 Aligned_cols=51 Identities=18% Similarity=0.213 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCC
Q 008645 172 FHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSP 235 (558)
Q Consensus 172 ~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P 235 (558)
-++||-+||+.|..+..+-.|+|||||||++++.|-.. + .-..+++++|+.
T Consensus 121 ~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~---------p----~~F~~y~~~SPS 171 (264)
T COG2819 121 TEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTY---------P----DCFGRYGLISPS 171 (264)
T ss_pred HHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcC---------c----chhceeeeecch
Confidence 36789999999988877899999999999998877542 1 246677766554
No 86
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=94.77 E-value=0.22 Score=48.22 Aligned_cols=92 Identities=18% Similarity=0.049 Sum_probs=58.0
Q ss_pred cCCccccceeecCCCCCCCc-hhhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEeCCCcHHHHHHHHHhhccCCCccchhh
Q 008645 144 FGIEANSIIAAPYDWRLSPS-KLEERDLYFHKLKLTFETALKLRG-GPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKW 221 (558)
Q Consensus 144 ~GY~~~~L~gapYDWRls~~-~~e~~d~y~~~Lk~lIE~~~~~~g-~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~W 221 (558)
.|-....+.+.+|.=-..+. ..++...=...+.++|++..++.- .|++|+|+|.|+.|+...|.... ....
T Consensus 35 ~g~~~~~~~~V~YpA~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~-------l~~~ 107 (179)
T PF01083_consen 35 PGGTSVAVQGVEYPASLGPNSYGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDG-------LPPD 107 (179)
T ss_dssp CTTCEEEEEE--S---SCGGSCHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTT-------SSHH
T ss_pred cCCCeeEEEecCCCCCCCcccccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhcc-------CChh
Confidence 45444566666776655542 112223335778888988877774 48999999999999999988611 1233
Q ss_pred hhhhhceEEEecCCCCCchhh
Q 008645 222 LDEHIHAYFAVGSPFLGATQS 242 (558)
Q Consensus 222 kdk~I~~~I~lg~P~~Gs~~a 242 (558)
...+|.++|++|-|.......
T Consensus 108 ~~~~I~avvlfGdP~~~~~~~ 128 (179)
T PF01083_consen 108 VADRIAAVVLFGDPRRGAGQP 128 (179)
T ss_dssp HHHHEEEEEEES-TTTBTTTT
T ss_pred hhhhEEEEEEecCCcccCCcc
Confidence 346799999999998644333
No 87
>PRK10566 esterase; Provisional
Probab=94.77 E-value=0.094 Score=51.69 Aligned_cols=74 Identities=9% Similarity=-0.009 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHcCCcc--ccceeecCCCCCCCchhhhhhH-------HHHHHHHHHHHHHHhc---CCcEEEEEeCCCcH
Q 008645 133 VWKEWVKWCIEFGIEA--NSIIAAPYDWRLSPSKLEERDL-------YFHKLKLTFETALKLR---GGPSLVLAHSLGNN 200 (558)
Q Consensus 133 ~y~~li~~L~~~GY~~--~~L~gapYDWRls~~~~e~~d~-------y~~~Lk~lIE~~~~~~---g~~VvLIaHSMGGl 200 (558)
.|..+++.|.+.||.. -|.++.+- |.........+. -.+++...++.+.+.. ..+|+|+||||||.
T Consensus 42 ~~~~~~~~l~~~G~~v~~~d~~g~G~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~ 119 (249)
T PRK10566 42 VYSYFAVALAQAGFRVIMPDAPMHGA--RFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGWLLDDRLAVGGASMGGM 119 (249)
T ss_pred hHHHHHHHHHhCCCEEEEecCCcccc--cCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCCcCccceeEEeecccHH
Confidence 5778899999999952 34444321 110000001111 1234455555555442 24799999999999
Q ss_pred HHHHHHHH
Q 008645 201 VFRYFLEW 208 (558)
Q Consensus 201 va~~fL~~ 208 (558)
++.+++..
T Consensus 120 ~al~~~~~ 127 (249)
T PRK10566 120 TALGIMAR 127 (249)
T ss_pred HHHHHHHh
Confidence 99877653
No 88
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=94.67 E-value=0.071 Score=62.56 Aligned_cols=78 Identities=17% Similarity=0.042 Sum_probs=52.5
Q ss_pred hhHHHHHHHHHHHcCCc--cccceeecCC-CCCCCc-----------h--h-------hhhhHHHHHHHHHHHHHH----
Q 008645 131 SSVWKEWVKWCIEFGIE--ANSIIAAPYD-WRLSPS-----------K--L-------EERDLYFHKLKLTFETAL---- 183 (558)
Q Consensus 131 ~~~y~~li~~L~~~GY~--~~~L~gapYD-WRls~~-----------~--~-------e~~d~y~~~Lk~lIE~~~---- 183 (558)
...|..+++.|.+.||. ..|+++++-. |+.... . + .....+..++..+...+.
T Consensus 462 ~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~ 541 (792)
T TIGR03502 462 KENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSAL 541 (792)
T ss_pred HHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccc
Confidence 45688999999999995 3577777654 541000 0 0 123455666666666554
Q ss_pred --Hh-------cCCcEEEEEeCCCcHHHHHHHHH
Q 008645 184 --KL-------RGGPSLVLAHSLGNNVFRYFLEW 208 (558)
Q Consensus 184 --~~-------~g~~VvLIaHSMGGlva~~fL~~ 208 (558)
+. .+.||+++||||||++.+.|+..
T Consensus 542 ~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 542 AGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred cccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 11 13499999999999999999975
No 89
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.60 E-value=0.073 Score=56.89 Aligned_cols=62 Identities=18% Similarity=0.138 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHhcCC-cEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCCCc
Q 008645 172 FHKLKLTFETALKLRGG-PSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGA 239 (558)
Q Consensus 172 ~~~Lk~lIE~~~~~~g~-~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs 239 (558)
...|+++|..+.+.... +|+|+|||||+-+++..|+++..+. +.=....|+.+| +++|=.++
T Consensus 174 r~aLe~~lr~La~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~-----~~~l~~ki~nVi-LAaPDiD~ 236 (377)
T COG4782 174 RPALERLLRYLATDKPVKRIYLLAHSMGTWLLMEALRQLAIRA-----DRPLPAKIKNVI-LAAPDIDV 236 (377)
T ss_pred HHHHHHHHHHHHhCCCCceEEEEEecchHHHHHHHHHHHhccC-----CcchhhhhhheE-eeCCCCCh
Confidence 45688888877665544 6999999999999999999886542 110223466666 56665443
No 90
>PRK07581 hypothetical protein; Validated
Probab=94.56 E-value=0.052 Score=56.61 Aligned_cols=36 Identities=11% Similarity=0.121 Sum_probs=28.2
Q ss_pred Cc-EEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCC
Q 008645 188 GP-SLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPF 236 (558)
Q Consensus 188 ~~-VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~ 236 (558)
.+ ++||||||||.++..+....- +.|+++|.+++..
T Consensus 123 ~~~~~lvG~S~GG~va~~~a~~~P-------------~~V~~Lvli~~~~ 159 (339)
T PRK07581 123 ERLALVVGWSMGAQQTYHWAVRYP-------------DMVERAAPIAGTA 159 (339)
T ss_pred CceEEEEEeCHHHHHHHHHHHHCH-------------HHHhhheeeecCC
Confidence 37 479999999999998876531 3699999997654
No 91
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=94.50 E-value=0.1 Score=66.30 Aligned_cols=86 Identities=12% Similarity=0.068 Sum_probs=54.9
Q ss_pred hHHHHHHHHHHHcCCc--cccceeecCCCCCCC------chhhhhhHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHH
Q 008645 132 SVWKEWVKWCIEFGIE--ANSIIAAPYDWRLSP------SKLEERDLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFR 203 (558)
Q Consensus 132 ~~y~~li~~L~~~GY~--~~~L~gapYDWRls~------~~~e~~d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~ 203 (558)
..|..+++.|.+ +|. .-|++|++..-+... ...-..+.+.+.|.+++++. ..++++|+||||||.++.
T Consensus 1385 ~~w~~~~~~L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l---~~~~v~LvGhSmGG~iAl 1460 (1655)
T PLN02980 1385 EDWIPIMKAISG-SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHI---TPGKVTLVGYSMGARIAL 1460 (1655)
T ss_pred HHHHHHHHHHhC-CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHh---CCCCEEEEEECHHHHHHH
Confidence 478889988865 464 246766665322110 00012345566666666643 235899999999999999
Q ss_pred HHHHHhhccCCCccchhhhhhhhceEEEecC
Q 008645 204 YFLEWLKLEIPPKQYIKWLDEHIHAYFAVGS 234 (558)
Q Consensus 204 ~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~ 234 (558)
.+..... ..|+++|.+++
T Consensus 1461 ~~A~~~P-------------~~V~~lVlis~ 1478 (1655)
T PLN02980 1461 YMALRFS-------------DKIEGAVIISG 1478 (1655)
T ss_pred HHHHhCh-------------HhhCEEEEECC
Confidence 8876421 36999998865
No 92
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=94.22 E-value=0.06 Score=54.19 Aligned_cols=85 Identities=14% Similarity=0.039 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHcCCc-c-ccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHh-cCCcEEEEEeCCCcHHHHHHHHHh
Q 008645 133 VWKEWVKWCIEFGIE-A-NSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKL-RGGPSLVLAHSLGNNVFRYFLEWL 209 (558)
Q Consensus 133 ~y~~li~~L~~~GY~-~-~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~-~g~~VvLIaHSMGGlva~~fL~~~ 209 (558)
|-..|...|.+.+|. . --+...+-.|...-- ++-.++|+++||.+-.. +-.+|||+|||-|+.=+.|||.+-
T Consensus 54 y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~sl-----k~D~edl~~l~~Hi~~~~fSt~vVL~GhSTGcQdi~yYlTnt 128 (299)
T KOG4840|consen 54 YTTMLNRYLDENSWSLVQPQLRSSYNGYGTFSL-----KDDVEDLKCLLEHIQLCGFSTDVVLVGHSTGCQDIMYYLTNT 128 (299)
T ss_pred cHHHHHHHHhhccceeeeeeccccccccccccc-----cccHHHHHHHHHHhhccCcccceEEEecCccchHHHHHHHhc
Confidence 456788899999995 2 344444445765432 23468999999966432 123899999999999999999532
Q ss_pred hccCCCccchhhhhhhhceEEEec
Q 008645 210 KLEIPPKQYIKWLDEHIHAYFAVG 233 (558)
Q Consensus 210 ~~~~~~~~~~~Wkdk~I~~~I~lg 233 (558)
=++++|++-|..+
T Consensus 129 -----------~~~r~iraaIlqA 141 (299)
T KOG4840|consen 129 -----------TKDRKIRAAILQA 141 (299)
T ss_pred -----------cchHHHHHHHHhC
Confidence 2467888777653
No 93
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=94.22 E-value=0.12 Score=51.81 Aligned_cols=84 Identities=17% Similarity=0.169 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHcCCccccceeecCCCCCCCchhh------hhhHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHH
Q 008645 133 VWKEWVKWCIEFGIEANSIIAAPYDWRLSPSKLE------ERDLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFL 206 (558)
Q Consensus 133 ~y~~li~~L~~~GY~~~~L~gapYDWRls~~~~e------~~d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL 206 (558)
++..++..|++.||. ++-+|||- ..+++ ....-+++|...++.....|--=-+|+|||-||.|++.|-
T Consensus 50 ~~~~vA~~~e~~gis-----~fRfDF~G-nGeS~gsf~~Gn~~~eadDL~sV~q~~s~~nr~v~vi~gHSkGg~Vvl~ya 123 (269)
T KOG4667|consen 50 IMKNVAKALEKEGIS-----AFRFDFSG-NGESEGSFYYGNYNTEADDLHSVIQYFSNSNRVVPVILGHSKGGDVVLLYA 123 (269)
T ss_pred HHHHHHHHHHhcCce-----EEEEEecC-CCCcCCccccCcccchHHHHHHHHHHhccCceEEEEEEeecCccHHHHHHH
Confidence 677888999999985 45567763 22221 1111247788877766443211125789999999998777
Q ss_pred HHhhccCCCccchhhhhhhhceEEEecCCC
Q 008645 207 EWLKLEIPPKQYIKWLDEHIHAYFAVGSPF 236 (558)
Q Consensus 207 ~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~ 236 (558)
..+. -|+.+|++++-+
T Consensus 124 ~K~~--------------d~~~viNcsGRy 139 (269)
T KOG4667|consen 124 SKYH--------------DIRNVINCSGRY 139 (269)
T ss_pred Hhhc--------------CchheEEccccc
Confidence 6542 278999987655
No 94
>PLN02162 triacylglycerol lipase
Probab=94.07 E-value=0.098 Score=57.73 Aligned_cols=66 Identities=18% Similarity=0.320 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHhcCC-cEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCCCchhh
Q 008645 172 FHKLKLTFETALKLRGG-PSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGATQS 242 (558)
Q Consensus 172 ~~~Lk~lIE~~~~~~g~-~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs~~a 242 (558)
+..+++.+++..+++.. ++++.||||||-+|..+...+.... .....+ .+.++++.|+|=-|-..-
T Consensus 261 y~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa~L~~~~----~~~l~~-~~~~vYTFGqPRVGn~~F 327 (475)
T PLN02162 261 YYTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPAILAIHG----EDELLD-KLEGIYTFGQPRVGDEDF 327 (475)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHHHHHHcc----cccccc-ccceEEEeCCCCccCHHH
Confidence 45677777777766644 8999999999999987644432110 112222 367889999998887653
No 95
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=94.00 E-value=0.13 Score=56.06 Aligned_cols=83 Identities=19% Similarity=0.394 Sum_probs=63.9
Q ss_pred HHHHHHHHcCCccccceeecCCCCCCCchh---hhhhHHH-HHHHHHHHHHHHhcCC-cEEEEEeCCCcHHHHHHHHHhh
Q 008645 136 EWVKWCIEFGIEANSIIAAPYDWRLSPSKL---EERDLYF-HKLKLTFETALKLRGG-PSLVLAHSLGNNVFRYFLEWLK 210 (558)
Q Consensus 136 ~li~~L~~~GY~~~~L~gapYDWRls~~~~---e~~d~y~-~~Lk~lIE~~~~~~g~-~VvLIaHSMGGlva~~fL~~~~ 210 (558)
.+|.+|.+.|.+.. ==|||- |... ...++|. +.|.+.|+.+.+..|+ +|.+|||++||.++...+..+.
T Consensus 130 s~V~~l~~~g~~vf-----vIsw~n-Pd~~~~~~~~edYi~e~l~~aid~v~~itg~~~InliGyCvGGtl~~~ala~~~ 203 (445)
T COG3243 130 SLVRWLLEQGLDVF-----VISWRN-PDASLAAKNLEDYILEGLSEAIDTVKDITGQKDINLIGYCVGGTLLAAALALMA 203 (445)
T ss_pred cHHHHHHHcCCceE-----EEeccC-chHhhhhccHHHHHHHHHHHHHHHHHHHhCccccceeeEecchHHHHHHHHhhh
Confidence 47889999887532 237774 3332 1346777 8899999999998885 7999999999999988888753
Q ss_pred ccCCCccchhhhhhhhceEEEecCCC
Q 008645 211 LEIPPKQYIKWLDEHIHAYFAVGSPF 236 (558)
Q Consensus 211 ~~~~~~~~~~Wkdk~I~~~I~lg~P~ 236 (558)
++.|++++.+.+|+
T Consensus 204 ------------~k~I~S~T~lts~~ 217 (445)
T COG3243 204 ------------AKRIKSLTLLTSPV 217 (445)
T ss_pred ------------hcccccceeeecch
Confidence 23699999999997
No 96
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=94.00 E-value=0.11 Score=50.67 Aligned_cols=54 Identities=9% Similarity=-0.053 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHhcC---CcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCCCc
Q 008645 173 HKLKLTFETALKLRG---GPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGA 239 (558)
Q Consensus 173 ~~Lk~lIE~~~~~~g---~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs 239 (558)
..++.+|+.+.++.+ .+|+|+||||||.++..+..... ..+.+++.++++..+.
T Consensus 77 ~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p-------------~~~~~~~~~~g~~~~~ 133 (212)
T TIGR01840 77 ESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYP-------------DVFAGGASNAGLPYGE 133 (212)
T ss_pred HHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCc-------------hhheEEEeecCCcccc
Confidence 345666666655442 48999999999999987765321 2467888887765443
No 97
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=93.92 E-value=0.11 Score=52.14 Aligned_cols=50 Identities=20% Similarity=0.240 Sum_probs=36.5
Q ss_pred HHHHHHHHhcCCcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCC
Q 008645 177 LTFETALKLRGGPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSP 235 (558)
Q Consensus 177 ~lIE~~~~~~g~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P 235 (558)
+.++.+.+..++++.|.|||+||.+|.|....+.. -...+|.++++.-+|
T Consensus 73 ~yl~~~~~~~~~~i~v~GHSkGGnLA~yaa~~~~~---------~~~~rI~~vy~fDgP 122 (224)
T PF11187_consen 73 AYLKKIAKKYPGKIYVTGHSKGGNLAQYAAANCDD---------EIQDRISKVYSFDGP 122 (224)
T ss_pred HHHHHHHHhCCCCEEEEEechhhHHHHHHHHHccH---------HHhhheeEEEEeeCC
Confidence 44455555556679999999999999998876531 223479999988777
No 98
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=93.85 E-value=0.16 Score=49.31 Aligned_cols=89 Identities=10% Similarity=-0.028 Sum_probs=54.2
Q ss_pred HHHHHHHHHHcCCcc--cccee---ecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcC---CcEEEEEeCCCcHHHHHH
Q 008645 134 WKEWVKWCIEFGIEA--NSIIA---APYDWRLSPSKLEERDLYFHKLKLTFETALKLRG---GPSLVLAHSLGNNVFRYF 205 (558)
Q Consensus 134 y~~li~~L~~~GY~~--~~L~g---apYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g---~~VvLIaHSMGGlva~~f 205 (558)
|..-.+.|.+.||.. -+.+| ++.+|+..... +....-.+++.+.|+.+.++.. .+|.|+|||+||.++...
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~-~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~ 81 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRG-DWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLA 81 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTT-GTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhc-cccccchhhHHHHHHHHhccccccceeEEEEcccccccccchh
Confidence 445678889999952 23333 33355543221 1223456777888887766542 479999999999999877
Q ss_pred HHHhhccCCCccchhhhhhhhceEEEecCCC
Q 008645 206 LEWLKLEIPPKQYIKWLDEHIHAYFAVGSPF 236 (558)
Q Consensus 206 L~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~ 236 (558)
+.... ..+++.|+.+++.
T Consensus 82 ~~~~~-------------~~f~a~v~~~g~~ 99 (213)
T PF00326_consen 82 ATQHP-------------DRFKAAVAGAGVS 99 (213)
T ss_dssp HHHTC-------------CGSSEEEEESE-S
T ss_pred hcccc-------------eeeeeeeccceec
Confidence 76321 2467777775543
No 99
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=93.80 E-value=0.11 Score=55.59 Aligned_cols=52 Identities=8% Similarity=0.017 Sum_probs=37.9
Q ss_pred hHHHHHHHHHHHHHHHhcCCc-EEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCC
Q 008645 169 DLYFHKLKLTFETALKLRGGP-SLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPF 236 (558)
Q Consensus 169 d~y~~~Lk~lIE~~~~~~g~~-VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~ 236 (558)
+++.+.+..++++. .-.+ ++|+||||||.+++.+.... ...|+++|.++++.
T Consensus 130 ~~~~~~~~~~l~~l---~~~~~~~lvG~S~Gg~ia~~~a~~~-------------p~~v~~lvl~~~~~ 182 (379)
T PRK00175 130 RDWVRAQARLLDAL---GITRLAAVVGGSMGGMQALEWAIDY-------------PDRVRSALVIASSA 182 (379)
T ss_pred HHHHHHHHHHHHHh---CCCCceEEEEECHHHHHHHHHHHhC-------------hHhhhEEEEECCCc
Confidence 34666777777643 2236 58999999999998887653 13799999997654
No 100
>PLN00413 triacylglycerol lipase
Probab=93.72 E-value=0.13 Score=56.90 Aligned_cols=64 Identities=16% Similarity=0.234 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHhcC-CcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCCCchhh
Q 008645 174 KLKLTFETALKLRG-GPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGATQS 242 (558)
Q Consensus 174 ~Lk~lIE~~~~~~g-~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs~~a 242 (558)
.+.+.|+++.+.+. .++++.||||||-+|..+...+... ...-....|.++++.|+|--|-..-
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~L~~~-----~~~~~~~ri~~VYTFG~PRVGN~~F 333 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTAVLIMH-----DEEEMLERLEGVYTFGQPRVGDEDF 333 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHHhc-----cchhhccccceEEEeCCCCCccHHH
Confidence 45555566666564 4899999999999998776543211 0111122467899999998886653
No 101
>PRK06489 hypothetical protein; Provisional
Probab=93.71 E-value=0.1 Score=55.24 Aligned_cols=35 Identities=17% Similarity=0.165 Sum_probs=27.2
Q ss_pred CcEE-EEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCC
Q 008645 188 GPSL-VLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSP 235 (558)
Q Consensus 188 ~~Vv-LIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P 235 (558)
++++ |+||||||.+++++..... +.|+++|.+++.
T Consensus 153 ~~~~~lvG~SmGG~vAl~~A~~~P-------------~~V~~LVLi~s~ 188 (360)
T PRK06489 153 KHLRLILGTSMGGMHAWMWGEKYP-------------DFMDALMPMASQ 188 (360)
T ss_pred CceeEEEEECHHHHHHHHHHHhCc-------------hhhheeeeeccC
Confidence 3664 8999999999998886531 369999988653
No 102
>PRK11460 putative hydrolase; Provisional
Probab=93.67 E-value=0.4 Score=47.89 Aligned_cols=39 Identities=10% Similarity=-0.001 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHHhcC---CcEEEEEeCCCcHHHHHHHHH
Q 008645 170 LYFHKLKLTFETALKLRG---GPSLVLAHSLGNNVFRYFLEW 208 (558)
Q Consensus 170 ~y~~~Lk~lIE~~~~~~g---~~VvLIaHSMGGlva~~fL~~ 208 (558)
.....|.+.|+...++.+ .+|+|+||||||.++..++..
T Consensus 82 ~~~~~l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~ 123 (232)
T PRK11460 82 AIMPTFIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKA 123 (232)
T ss_pred HHHHHHHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHh
Confidence 334455566665554433 479999999999999887753
No 103
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=93.52 E-value=0.31 Score=50.04 Aligned_cols=93 Identities=14% Similarity=0.063 Sum_probs=52.4
Q ss_pred hhhHHHHHHHHHHHc---CCc--cccceeecCCCCCC-------CchhhhhhHHHHHHHHHHHHHHHh---cCCcEEEEE
Q 008645 130 LSSVWKEWVKWCIEF---GIE--ANSIIAAPYDWRLS-------PSKLEERDLYFHKLKLTFETALKL---RGGPSLVLA 194 (558)
Q Consensus 130 ~~~~y~~li~~L~~~---GY~--~~~L~gapYDWRls-------~~~~e~~d~y~~~Lk~lIE~~~~~---~g~~VvLIa 194 (558)
+..+|.+.++.|.+. .|+ +.+..|+...-..+ .-.+++ + .+.-...|++.... .+.|++|||
T Consensus 14 lv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~--Q-I~hk~~~i~~~~~~~~~~~~~liLiG 90 (266)
T PF10230_consen 14 LVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQD--Q-IEHKIDFIKELIPQKNKPNVKLILIG 90 (266)
T ss_pred hHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHH--H-HHHHHHHHHHHhhhhcCCCCcEEEEe
Confidence 456899999999865 343 23333433322221 001111 1 11122233333332 334899999
Q ss_pred eCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCC
Q 008645 195 HSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSP 235 (558)
Q Consensus 195 HSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P 235 (558)
||+|+-+++..|++... ....|.+.+.|-+.
T Consensus 91 HSIGayi~levl~r~~~----------~~~~V~~~~lLfPT 121 (266)
T PF10230_consen 91 HSIGAYIALEVLKRLPD----------LKFRVKKVILLFPT 121 (266)
T ss_pred CcHHHHHHHHHHHhccc----------cCCceeEEEEeCCc
Confidence 99999999999987531 12468888888444
No 104
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=93.49 E-value=0.27 Score=47.25 Aligned_cols=84 Identities=12% Similarity=0.082 Sum_probs=53.0
Q ss_pred HHHHHHHHH-cCCccccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHh-----c-CCcEEEEEeCCCcHHHHHHHH
Q 008645 135 KEWVKWCIE-FGIEANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKL-----R-GGPSLVLAHSLGNNVFRYFLE 207 (558)
Q Consensus 135 ~~li~~L~~-~GY~~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~-----~-g~~VvLIaHSMGGlva~~fL~ 207 (558)
..+++.|.+ .||. .+.-|+|++|.. ....-.++++..++.+.+. . ..+|+|+|||-||.++..++.
T Consensus 18 ~~~~~~la~~~g~~-----v~~~~Yrl~p~~--~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~ 90 (211)
T PF07859_consen 18 WPFAARLAAERGFV-----VVSIDYRLAPEA--PFPAALEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLAL 90 (211)
T ss_dssp HHHHHHHHHHHTSE-----EEEEE---TTTS--STTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHH
T ss_pred HHHHHHHHhhccEE-----EEEeeccccccc--cccccccccccceeeeccccccccccccceEEeecccccchhhhhhh
Confidence 455666664 7874 556688898764 2344556666666665554 2 237999999999999998887
Q ss_pred HhhccCCCccchhhhhhhhceEEEecC
Q 008645 208 WLKLEIPPKQYIKWLDEHIHAYFAVGS 234 (558)
Q Consensus 208 ~~~~~~~~~~~~~Wkdk~I~~~I~lg~ 234 (558)
..... ....+++++.+++
T Consensus 91 ~~~~~---------~~~~~~~~~~~~p 108 (211)
T PF07859_consen 91 RARDR---------GLPKPKGIILISP 108 (211)
T ss_dssp HHHHT---------TTCHESEEEEESC
T ss_pred hhhhh---------cccchhhhhcccc
Confidence 64321 0123899998866
No 105
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=93.46 E-value=0.18 Score=50.21 Aligned_cols=53 Identities=19% Similarity=0.234 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHh--cCCcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEE
Q 008645 172 FHKLKLTFETALKL--RGGPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYF 230 (558)
Q Consensus 172 ~~~Lk~lIE~~~~~--~g~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I 230 (558)
+.++++-.+.-.++ +|+|++|+|||.|+.+++..|+..-. ...-+++.|.+++
T Consensus 77 y~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~~~------~~pl~~rLVAAYl 131 (207)
T PF11288_consen 77 YSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEEIA------GDPLRKRLVAAYL 131 (207)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHHhc------CchHHhhhheeee
Confidence 34455554443333 35699999999999999999984311 1235566677666
No 106
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=93.42 E-value=0.15 Score=52.11 Aligned_cols=50 Identities=14% Similarity=0.102 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCC
Q 008645 173 HKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSP 235 (558)
Q Consensus 173 ~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P 235 (558)
+.|..++++.+....+++.|+||||||.++..+..... ..+++++++++.
T Consensus 123 ~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p-------------~~~~~~~~~~~~ 172 (275)
T TIGR02821 123 QELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNP-------------DRFKSVSAFAPI 172 (275)
T ss_pred HHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCc-------------ccceEEEEECCc
Confidence 45555666544334458999999999999987765421 246788877544
No 107
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=93.36 E-value=0.35 Score=47.35 Aligned_cols=66 Identities=18% Similarity=0.128 Sum_probs=37.4
Q ss_pred hhHHHHHHHHHHHcCCccccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHHHH
Q 008645 131 SSVWKEWVKWCIEFGIEANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFLEW 208 (558)
Q Consensus 131 ~~~y~~li~~L~~~GY~~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL~~ 208 (558)
+.....+.+.+.+.|-+. .-. +..++.. .+...+.+.++|++.. ...++|||+||||.+|.++-+.
T Consensus 14 S~Ka~~l~~~~~~~~~~~---~~~--~p~l~~~----p~~a~~~l~~~i~~~~---~~~~~liGSSlGG~~A~~La~~ 79 (187)
T PF05728_consen 14 SFKAQALKQYFAEHGPDI---QYP--CPDLPPF----PEEAIAQLEQLIEELK---PENVVLIGSSLGGFYATYLAER 79 (187)
T ss_pred CHHHHHHHHHHHHhCCCc---eEE--CCCCCcC----HHHHHHHHHHHHHhCC---CCCeEEEEEChHHHHHHHHHHH
Confidence 345566777788876431 001 1222211 1223445555555432 2249999999999999876554
No 108
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=93.35 E-value=0.31 Score=53.10 Aligned_cols=104 Identities=17% Similarity=0.142 Sum_probs=72.8
Q ss_pred ccCCCcccchhhHHHHHHHHHHHcCCcc--ccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcCC-cEEEEEeCC
Q 008645 121 LDPGYITGPLSSVWKEWVKWCIEFGIEA--NSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRGG-PSLVLAHSL 197 (558)
Q Consensus 121 Ldp~~~~~~~~~~y~~li~~L~~~GY~~--~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g~-~VvLIaHSM 197 (558)
|-|+...++...|-..++..+.+.||.. .|-+|.+.-==.++..- ....-++|+..|+.+.+++-+ |...+|-||
T Consensus 130 ilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f--~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~ 207 (409)
T KOG1838|consen 130 ILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLF--TAGWTEDLREVVNHIKKRYPQAPLFAVGFSM 207 (409)
T ss_pred EecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCcee--ecCCHHHHHHHHHHHHHhCCCCceEEEEecc
Confidence 3355545677788899999999999963 56666544322232211 022357899999999988855 899999999
Q ss_pred CcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCC
Q 008645 198 GNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFL 237 (558)
Q Consensus 198 GGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~ 237 (558)
||.+...||-.-+. +..+.+-++++.||.
T Consensus 208 Gg~iL~nYLGE~g~-----------~~~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 208 GGNILTNYLGEEGD-----------NTPLIAAVAVCNPWD 236 (409)
T ss_pred hHHHHHHHhhhccC-----------CCCceeEEEEeccch
Confidence 99999888864321 124777788999994
No 109
>PRK10162 acetyl esterase; Provisional
Probab=93.13 E-value=0.53 Score=49.26 Aligned_cols=91 Identities=11% Similarity=-0.018 Sum_probs=52.8
Q ss_pred HHHHHHHHHHH-cCCccccceeecCCCCCCCchh--hhhhHHHHHHHHHHHHHHHhc--CCcEEEEEeCCCcHHHHHHHH
Q 008645 133 VWKEWVKWCIE-FGIEANSIIAAPYDWRLSPSKL--EERDLYFHKLKLTFETALKLR--GGPSLVLAHSLGNNVFRYFLE 207 (558)
Q Consensus 133 ~y~~li~~L~~-~GY~~~~L~gapYDWRls~~~~--e~~d~y~~~Lk~lIE~~~~~~--g~~VvLIaHSMGGlva~~fL~ 207 (558)
.+..+.+.|.+ .||. ....|+|+++... ...++....++.+.+.+.+.. ..+|+|+||||||.++..+..
T Consensus 99 ~~~~~~~~la~~~g~~-----Vv~vdYrlape~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~ 173 (318)
T PRK10162 99 THDRIMRLLASYSGCT-----VIGIDYTLSPEARFPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASAL 173 (318)
T ss_pred hhhHHHHHHHHHcCCE-----EEEecCCCCCCCCCCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHH
Confidence 45667777776 5663 4566789988641 122333333333333332222 237999999999999988876
Q ss_pred HhhccCCCccchhhhhhhhceEEEecCC
Q 008645 208 WLKLEIPPKQYIKWLDEHIHAYFAVGSP 235 (558)
Q Consensus 208 ~~~~~~~~~~~~~Wkdk~I~~~I~lg~P 235 (558)
+..... . ....|++.|.+.+.
T Consensus 174 ~~~~~~----~---~~~~~~~~vl~~p~ 194 (318)
T PRK10162 174 WLRDKQ----I---DCGKVAGVLLWYGL 194 (318)
T ss_pred HHHhcC----C---CccChhheEEECCc
Confidence 543210 0 01247777777543
No 110
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=92.94 E-value=0.1 Score=56.96 Aligned_cols=93 Identities=16% Similarity=0.167 Sum_probs=64.7
Q ss_pred HHHHHHHcCCcc--ccceeecCCCCCC---Cc-hhh----hhhH-HHHHHHHHHHHHHHhcCC-cEEEEEeCCCcHHHHH
Q 008645 137 WVKWCIEFGIEA--NSIIAAPYDWRLS---PS-KLE----ERDL-YFHKLKLTFETALKLRGG-PSLVLAHSLGNNVFRY 204 (558)
Q Consensus 137 li~~L~~~GY~~--~~L~gapYDWRls---~~-~~e----~~d~-y~~~Lk~lIE~~~~~~g~-~VvLIaHSMGGlva~~ 204 (558)
+.-.|.+.|||. .|.+|-.|.+|.- +. ..+ +.++ =..+|-++|+.+++.+|+ ++..||||.|+.....
T Consensus 98 Laf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv 177 (403)
T KOG2624|consen 98 LAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFV 177 (403)
T ss_pred HHHHHHHcCCceeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhhee
Confidence 555688999986 5899998887752 21 110 0111 124799999999999987 8999999999999865
Q ss_pred HHHHhhccCCCccchhhhhhhhceEEEecCCCCCchh
Q 008645 205 FLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGATQ 241 (558)
Q Consensus 205 fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs~~ 241 (558)
.|..- ++-. +.|+.+++||++- +++
T Consensus 178 ~lS~~---------p~~~-~kI~~~~aLAP~~--~~k 202 (403)
T KOG2624|consen 178 MLSER---------PEYN-KKIKSFIALAPAA--FPK 202 (403)
T ss_pred hhccc---------chhh-hhhheeeeecchh--hhc
Confidence 55431 1122 5799999996654 555
No 111
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=92.92 E-value=0.16 Score=55.08 Aligned_cols=53 Identities=9% Similarity=-0.060 Sum_probs=36.4
Q ss_pred hHHHHHHHHHHHHHHHhcCCcEE-EEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCC
Q 008645 169 DLYFHKLKLTFETALKLRGGPSL-VLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFL 237 (558)
Q Consensus 169 d~y~~~Lk~lIE~~~~~~g~~Vv-LIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~ 237 (558)
.++.+.+.+++++. .=.++. ||||||||.+++.+.... + ..|+++|.+++...
T Consensus 144 ~d~~~~~~~ll~~l---gi~~~~~vvG~SmGG~ial~~a~~~---------P----~~v~~lv~ia~~~~ 197 (389)
T PRK06765 144 LDFVRVQKELIKSL---GIARLHAVMGPSMGGMQAQEWAVHY---------P----HMVERMIGVIGNPQ 197 (389)
T ss_pred HHHHHHHHHHHHHc---CCCCceEEEEECHHHHHHHHHHHHC---------h----HhhheEEEEecCCC
Confidence 34566667777542 223675 999999999998776542 1 36999999976543
No 112
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=92.81 E-value=0.21 Score=46.36 Aligned_cols=37 Identities=14% Similarity=0.205 Sum_probs=29.5
Q ss_pred CcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCC
Q 008645 188 GPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFL 237 (558)
Q Consensus 188 ~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~ 237 (558)
.+++|+||||||.++..+..... ..|+++|.++++..
T Consensus 88 ~~~~l~G~S~Gg~~~~~~~~~~p-------------~~~~~~v~~~~~~~ 124 (282)
T COG0596 88 EKVVLVGHSMGGAVALALALRHP-------------DRVRGLVLIGPAPP 124 (282)
T ss_pred CceEEEEecccHHHHHHHHHhcc-------------hhhheeeEecCCCC
Confidence 36999999999999988876531 16899999987764
No 113
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=92.50 E-value=0.2 Score=50.92 Aligned_cols=25 Identities=20% Similarity=0.240 Sum_probs=22.2
Q ss_pred CCcEEEEEeCCCcHHHHHHHHHhhc
Q 008645 187 GGPSLVLAHSLGNNVFRYFLEWLKL 211 (558)
Q Consensus 187 g~~VvLIaHSMGGlva~~fL~~~~~ 211 (558)
++|..++||||||++|......++.
T Consensus 73 d~P~alfGHSmGa~lAfEvArrl~~ 97 (244)
T COG3208 73 DAPFALFGHSMGAMLAFEVARRLER 97 (244)
T ss_pred CCCeeecccchhHHHHHHHHHHHHH
Confidence 5699999999999999999888764
No 114
>PLN02934 triacylglycerol lipase
Probab=92.47 E-value=0.24 Score=55.32 Aligned_cols=67 Identities=22% Similarity=0.293 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHhcCC-cEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCCCchhhhh
Q 008645 173 HKLKLTFETALKLRGG-PSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGATQSVK 244 (558)
Q Consensus 173 ~~Lk~lIE~~~~~~g~-~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs~~al~ 244 (558)
..++..|+++.+++.. ++++.||||||-+|..+...+.... ..... ..+-.+++.|+|--|-..-.+
T Consensus 305 ~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~~L~l~~----~~~~l-~~~~~vYTFGsPRVGN~~FA~ 372 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPTVLVLQE----ETEVM-KRLLGVYTFGQPRIGNRQLGK 372 (515)
T ss_pred HHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHHHHHHhc----ccccc-cCceEEEEeCCCCccCHHHHH
Confidence 4567777777776644 8999999999999987754432110 01111 234578999999888766543
No 115
>PLN02442 S-formylglutathione hydrolase
Probab=92.40 E-value=0.31 Score=50.20 Aligned_cols=52 Identities=10% Similarity=0.034 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHhc-CCcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCC
Q 008645 172 FHKLKLTFETALKLR-GGPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPF 236 (558)
Q Consensus 172 ~~~Lk~lIE~~~~~~-g~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~ 236 (558)
.+.|...|+..+..- ..+++|+||||||.++..+..... ..+++++++++..
T Consensus 126 ~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p-------------~~~~~~~~~~~~~ 178 (283)
T PLN02442 126 VKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNP-------------DKYKSVSAFAPIA 178 (283)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCc-------------hhEEEEEEECCcc
Confidence 355677777766433 347999999999999987665421 2467788776653
No 116
>PLN02408 phospholipase A1
Probab=92.24 E-value=0.23 Score=53.56 Aligned_cols=46 Identities=17% Similarity=0.213 Sum_probs=29.9
Q ss_pred cEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCCCchhh
Q 008645 189 PSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGATQS 242 (558)
Q Consensus 189 ~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs~~a 242 (558)
++++.||||||-+|....-.+... +....+-.+++.|+|-.|-..-
T Consensus 201 sI~vTGHSLGGALAtLaA~dl~~~--------~~~~~~V~v~tFGsPRVGN~~F 246 (365)
T PLN02408 201 SLTITGHSLGAALATLTAYDIKTT--------FKRAPMVTVISFGGPRVGNRSF 246 (365)
T ss_pred eEEEeccchHHHHHHHHHHHHHHh--------cCCCCceEEEEcCCCCcccHHH
Confidence 589999999999998666555321 1111223478888887775443
No 117
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=92.05 E-value=0.33 Score=47.25 Aligned_cols=55 Identities=22% Similarity=0.227 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHhcC-C-cEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCCCc
Q 008645 172 FHKLKLTFETALKLRG-G-PSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGA 239 (558)
Q Consensus 172 ~~~Lk~lIE~~~~~~g-~-~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs 239 (558)
..+|..+++.+...++ . .+.+||||+|++++-.-++... ..++.+|.+|+|=.|+
T Consensus 91 a~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~-------------~~vddvv~~GSPG~g~ 147 (177)
T PF06259_consen 91 APRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGG-------------LRVDDVVLVGSPGMGV 147 (177)
T ss_pred HHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCC-------------CCcccEEEECCCCCCC
Confidence 4678888887776662 2 6999999999999988876511 2588899999985554
No 118
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=91.84 E-value=0.41 Score=49.86 Aligned_cols=80 Identities=18% Similarity=0.135 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHcCCc--cccceeecC-----CCCCCCchhhhhhHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHH
Q 008645 133 VWKEWVKWCIEFGIE--ANSIIAAPY-----DWRLSPSKLEERDLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYF 205 (558)
Q Consensus 133 ~y~~li~~L~~~GY~--~~~L~gapY-----DWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~f 205 (558)
.|+.|...|++.|.+ +-|+.|+.+ +.++.+. +|..|. +++++++- -.++++++|||.||=.|+..
T Consensus 50 DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~---er~~~~---~~ll~~l~--i~~~~i~~gHSrGcenal~l 121 (297)
T PF06342_consen 50 DFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNE---ERQNFV---NALLDELG--IKGKLIFLGHSRGCENALQL 121 (297)
T ss_pred chhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChH---HHHHHH---HHHHHHcC--CCCceEEEEeccchHHHHHH
Confidence 688899999999985 567777644 4444433 455554 44444331 13589999999999999654
Q ss_pred HHHhhccCCCccchhhhhhhhceEEEecCC
Q 008645 206 LEWLKLEIPPKQYIKWLDEHIHAYFAVGSP 235 (558)
Q Consensus 206 L~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P 235 (558)
.... ...++++|.+|
T Consensus 122 a~~~---------------~~~g~~lin~~ 136 (297)
T PF06342_consen 122 AVTH---------------PLHGLVLINPP 136 (297)
T ss_pred HhcC---------------ccceEEEecCC
Confidence 4321 24688888555
No 119
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=91.12 E-value=0.91 Score=43.91 Aligned_cols=95 Identities=18% Similarity=0.154 Sum_probs=58.3
Q ss_pred hhHHHHHHHHHHHcCCc--cc---cceeecCCCCCCCchhhhh-hHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHH
Q 008645 131 SSVWKEWVKWCIEFGIE--AN---SIIAAPYDWRLSPSKLEER-DLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRY 204 (558)
Q Consensus 131 ~~~y~~li~~L~~~GY~--~~---~L~gapYDWRls~~~~e~~-d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~ 204 (558)
+..+..+.+.|...|+. +. =+..-+++-|++|+..+.. +.|.....++- ....+.|.++=||||||-++..
T Consensus 29 St~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~---~~l~~gpLi~GGkSmGGR~aSm 105 (213)
T COG3571 29 STSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLR---AGLAEGPLIIGGKSMGGRVASM 105 (213)
T ss_pred CHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHH---hcccCCceeeccccccchHHHH
Confidence 34677888999999984 22 2334456766666554322 33322222221 1223459999999999999965
Q ss_pred HHHHhhccCCCccchhhhhhhhceEEEecCCCCCchh
Q 008645 205 FLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGATQ 241 (558)
Q Consensus 205 fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs~~ 241 (558)
...-+. ..|+.++.+|-||--..|
T Consensus 106 vade~~-------------A~i~~L~clgYPfhppGK 129 (213)
T COG3571 106 VADELQ-------------APIDGLVCLGYPFHPPGK 129 (213)
T ss_pred HHHhhc-------------CCcceEEEecCccCCCCC
Confidence 544332 139999999999854433
No 120
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=91.12 E-value=0.68 Score=45.67 Aligned_cols=92 Identities=12% Similarity=0.170 Sum_probs=63.4
Q ss_pred HHHHHHHHHcCCccccceeecCCCCC-CCchhhhhhHHHHHHHHHHHHHHHhcCC-cEEEEEeCCCcHHHHHHHHHhhcc
Q 008645 135 KEWVKWCIEFGIEANSIIAAPYDWRL-SPSKLEERDLYFHKLKLTFETALKLRGG-PSLVLAHSLGNNVFRYFLEWLKLE 212 (558)
Q Consensus 135 ~~li~~L~~~GY~~~~L~gapYDWRl-s~~~~e~~d~y~~~Lk~lIE~~~~~~g~-~VvLIaHSMGGlva~~fL~~~~~~ 212 (558)
+.+.+.|.+.|+-..-+=..-|=|.. +| .+...+|.++|....++-+. +|+|||-|.|+=|+-..++.+.
T Consensus 19 ~~~a~~l~~~G~~VvGvdsl~Yfw~~rtP------~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSFGADvlP~~~nrLp-- 90 (192)
T PF06057_consen 19 KQIAEALAKQGVPVVGVDSLRYFWSERTP------EQTAADLARIIRHYRARWGRKRVVLIGYSFGADVLPFIYNRLP-- 90 (192)
T ss_pred HHHHHHHHHCCCeEEEechHHHHhhhCCH------HHHHHHHHHHHHHHHHHhCCceEEEEeecCCchhHHHHHhhCC--
Confidence 45889999999943222233455542 33 33577888888887776554 8999999999988877777652
Q ss_pred CCCccchhhhhhhhceEEEecCCCCCchh
Q 008645 213 IPPKQYIKWLDEHIHAYFAVGSPFLGATQ 241 (558)
Q Consensus 213 ~~~~~~~~Wkdk~I~~~I~lg~P~~Gs~~ 241 (558)
+.-+ +.|..+++|+..-....+
T Consensus 91 ------~~~r-~~v~~v~Ll~p~~~~dFe 112 (192)
T PF06057_consen 91 ------AALR-ARVAQVVLLSPSTTADFE 112 (192)
T ss_pred ------HHHH-hheeEEEEeccCCcceEE
Confidence 3334 469999999776544444
No 121
>PLN02310 triacylglycerol lipase
Probab=90.91 E-value=0.36 Score=52.69 Aligned_cols=64 Identities=16% Similarity=0.083 Sum_probs=38.1
Q ss_pred hHHHHHHHHHHHHHHHhcC-CcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCCCchh
Q 008645 169 DLYFHKLKLTFETALKLRG-GPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGATQ 241 (558)
Q Consensus 169 d~y~~~Lk~lIE~~~~~~g-~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs~~ 241 (558)
++..+.++++++.-...+. .+|+|.||||||-+|..+...+... -....| .+++.|+|--|-..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~--------~~~~~v-~vyTFGsPRVGN~~ 253 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATT--------IPDLFV-SVISFGAPRVGNIA 253 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHh--------CcCcce-eEEEecCCCcccHH
Confidence 4445555666553221222 2799999999999997655443211 011123 48899999888543
No 122
>COG1647 Esterase/lipase [General function prediction only]
Probab=90.83 E-value=1.6 Score=44.14 Aligned_cols=88 Identities=9% Similarity=0.006 Sum_probs=50.9
Q ss_pred hHHHHHHHHHHHcCCcc--ccceeecCCCCCCCch-hh-hhhHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHHH
Q 008645 132 SVWKEWVKWCIEFGIEA--NSIIAAPYDWRLSPSK-LE-ERDLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFLE 207 (558)
Q Consensus 132 ~~y~~li~~L~~~GY~~--~~L~gapYDWRls~~~-~e-~~d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL~ 207 (558)
+-.+.|.+.|.+.||.. -++.|++- .+.. ++ .-++++++.-.--+.+.+.--..|.++|-||||++++..-.
T Consensus 29 ~Dvr~Lgr~L~e~GyTv~aP~ypGHG~----~~e~fl~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~GlSmGGv~alkla~ 104 (243)
T COG1647 29 RDVRMLGRYLNENGYTVYAPRYPGHGT----LPEDFLKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGLSMGGVFALKLAY 104 (243)
T ss_pred HHHHHHHHHHHHCCceEecCCCCCCCC----CHHHHhcCCHHHHHHHHHHHHHHHHHcCCCeEEEEeecchhHHHHHHHh
Confidence 45788999999999963 23333310 1111 00 11223333332222222211126999999999999976544
Q ss_pred HhhccCCCccchhhhhhhhceEEEecCCCCC
Q 008645 208 WLKLEIPPKQYIKWLDEHIHAYFAVGSPFLG 238 (558)
Q Consensus 208 ~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~G 238 (558)
.+ -++++|.+++|...
T Consensus 105 ~~---------------p~K~iv~m~a~~~~ 120 (243)
T COG1647 105 HY---------------PPKKIVPMCAPVNV 120 (243)
T ss_pred hC---------------CccceeeecCCccc
Confidence 32 37899999999853
No 123
>PLN02454 triacylglycerol lipase
Probab=90.83 E-value=0.43 Score=52.17 Aligned_cols=67 Identities=16% Similarity=0.091 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHhcC-C--cEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCCCchhhhhhh
Q 008645 174 KLKLTFETALKLRG-G--PSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGATQSVKAT 246 (558)
Q Consensus 174 ~Lk~lIE~~~~~~g-~--~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs~~al~~l 246 (558)
++...|+++.+++. . +|++.||||||.+|..+...+..... ...+..| ..|+.|+|-.|-..-.+.+
T Consensus 211 qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di~~~g~-----~~~~~~V-~~~TFGsPRVGN~~Fa~~~ 280 (414)
T PLN02454 211 QLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDIVENGV-----SGADIPV-TAIVFGSPQVGNKEFNDRF 280 (414)
T ss_pred HHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHHHHhcc-----cccCCce-EEEEeCCCcccCHHHHHHH
Confidence 34444444444442 2 48999999999999876654432100 0011123 3578999988875544433
No 124
>PLN02571 triacylglycerol lipase
Probab=90.82 E-value=0.43 Score=52.19 Aligned_cols=72 Identities=18% Similarity=0.097 Sum_probs=40.0
Q ss_pred hhHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhh-hhhh-ceEEEecCCCCCchhh
Q 008645 168 RDLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWL-DEHI-HAYFAVGSPFLGATQS 242 (558)
Q Consensus 168 ~d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wk-dk~I-~~~I~lg~P~~Gs~~a 242 (558)
+++..+.|+++++.. ...+.+|++.||||||.+|..+...+....... .... ++.+ -.+++.|+|--|-..-
T Consensus 207 r~qvl~eV~~L~~~y-~~e~~sI~VTGHSLGGALAtLaA~dl~~~g~n~--~~~~~~~~~~V~v~TFGsPRVGN~~F 280 (413)
T PLN02571 207 RDQVLNEVGRLVEKY-KDEEISITICGHSLGAALATLNAVDIVANGFNR--SKSRPNKSCPVTAFVFASPRVGDSDF 280 (413)
T ss_pred HHHHHHHHHHHHHhc-CcccccEEEeccchHHHHHHHHHHHHHHhcccc--cccccccCcceEEEEeCCCCccCHHH
Confidence 455666777776542 222337999999999999876554432110000 0000 1111 1456889998885443
No 125
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=90.74 E-value=0.34 Score=51.10 Aligned_cols=37 Identities=24% Similarity=0.257 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHhcC-CcEEEEEeCCCcHHHHHHHHH
Q 008645 171 YFHKLKLTFETALKLRG-GPSLVLAHSLGNNVFRYFLEW 208 (558)
Q Consensus 171 y~~~Lk~lIE~~~~~~g-~~VvLIaHSMGGlva~~fL~~ 208 (558)
..++++.+|+....... .|++|+|||||| +...++..
T Consensus 105 ma~dv~~Fi~~v~~~~~~~~~~l~GHsmGG-~~~~m~~t 142 (315)
T KOG2382|consen 105 MAEDVKLFIDGVGGSTRLDPVVLLGHSMGG-VKVAMAET 142 (315)
T ss_pred HHHHHHHHHHHcccccccCCceecccCcch-HHHHHHHH
Confidence 45567777776654332 389999999999 55444443
No 126
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=90.71 E-value=0.86 Score=48.47 Aligned_cols=92 Identities=16% Similarity=0.102 Sum_probs=59.9
Q ss_pred hHHHHHHHHHHHcCCcc--ccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcCC-cEEEEEeCCCcHHHHHHHHH
Q 008645 132 SVWKEWVKWCIEFGIEA--NSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRGG-PSLVLAHSLGNNVFRYFLEW 208 (558)
Q Consensus 132 ~~y~~li~~L~~~GY~~--~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g~-~VvLIaHSMGGlva~~fL~~ 208 (558)
.|-.-|.++|.+.||.+ .+.+|..+-=-.+|..- .++..++++..++.+++.... |...+|-||||.+...||-.
T Consensus 91 ~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~y--h~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylge 168 (345)
T COG0429 91 PYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLY--HSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGE 168 (345)
T ss_pred HHHHHHHHHHHhcCCeEEEEecccccCCcccCccee--cccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHh
Confidence 46778999999999963 23333333222222211 133458899999998886654 99999999999555544432
Q ss_pred hhccCCCccchhhhhhhhceEEEecCCC
Q 008645 209 LKLEIPPKQYIKWLDEHIHAYFAVGSPF 236 (558)
Q Consensus 209 ~~~~~~~~~~~~Wkdk~I~~~I~lg~P~ 236 (558)
-+. +--+.+-++++.||
T Consensus 169 eg~-----------d~~~~aa~~vs~P~ 185 (345)
T COG0429 169 EGD-----------DLPLDAAVAVSAPF 185 (345)
T ss_pred hcc-----------CcccceeeeeeCHH
Confidence 121 23568888899998
No 127
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=90.55 E-value=1.3 Score=45.52 Aligned_cols=91 Identities=12% Similarity=0.027 Sum_probs=54.7
Q ss_pred hhHHHHHHHHHHHcCCccccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcCC-cEEEEEeCCCcHHHHHHHHHh
Q 008645 131 SSVWKEWVKWCIEFGIEANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRGG-PSLVLAHSLGNNVFRYFLEWL 209 (558)
Q Consensus 131 ~~~y~~li~~L~~~GY~~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g~-~VvLIaHSMGGlva~~fL~~~ 209 (558)
+..|..|...|... .....+.+-.|--...... + .-+.....++.+++.... |++|+|||+||.|+...-.++
T Consensus 13 ~~~~~~L~~~l~~~-~~v~~l~a~g~~~~~~~~~--~---l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG~vA~evA~qL 86 (257)
T COG3319 13 VLAYAPLAAALGPL-LPVYGLQAPGYGAGEQPFA--S---LDDMAAAYVAAIRRVQPEGPYVLLGWSLGGAVAFEVAAQL 86 (257)
T ss_pred HHHHHHHHHHhccC-ceeeccccCcccccccccC--C---HHHHHHHHHHHHHHhCCCCCEEEEeeccccHHHHHHHHHH
Confidence 34677777777653 1111222233321111111 1 223556667777766644 999999999999999888777
Q ss_pred hccCCCccchhhhhhhhceEEEecCCCC
Q 008645 210 KLEIPPKQYIKWLDEHIHAYFAVGSPFL 237 (558)
Q Consensus 210 ~~~~~~~~~~~Wkdk~I~~~I~lg~P~~ 237 (558)
... .+-|..+++|=++-.
T Consensus 87 ~~~----------G~~Va~L~llD~~~~ 104 (257)
T COG3319 87 EAQ----------GEEVAFLGLLDAVPP 104 (257)
T ss_pred HhC----------CCeEEEEEEeccCCC
Confidence 642 246888888855543
No 128
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=90.28 E-value=0.43 Score=53.84 Aligned_cols=83 Identities=10% Similarity=-0.125 Sum_probs=53.1
Q ss_pred HHHHHHcCCc--cccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhc--CCcEEEEEeCCCcHHHHHHHHHhhccC
Q 008645 138 VKWCIEFGIE--ANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLR--GGPSLVLAHSLGNNVFRYFLEWLKLEI 213 (558)
Q Consensus 138 i~~L~~~GY~--~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~--g~~VvLIaHSMGGlva~~fL~~~~~~~ 213 (558)
.+.|.+.||. ..|++|....-... ... . ....+++..+|+.+.++. +.+|.++||||||.++..+....
T Consensus 46 ~~~l~~~Gy~vv~~D~RG~g~S~g~~-~~~-~-~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~---- 118 (550)
T TIGR00976 46 PAWFVAQGYAVVIQDTRGRGASEGEF-DLL-G-SDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQ---- 118 (550)
T ss_pred HHHHHhCCcEEEEEeccccccCCCce-Eec-C-cccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccC----
Confidence 4567889995 35777764432110 000 0 234678888888776642 35899999999999987665421
Q ss_pred CCccchhhhhhhhceEEEecCCC
Q 008645 214 PPKQYIKWLDEHIHAYFAVGSPF 236 (558)
Q Consensus 214 ~~~~~~~Wkdk~I~~~I~lg~P~ 236 (558)
...++++|..++..
T Consensus 119 ---------~~~l~aiv~~~~~~ 132 (550)
T TIGR00976 119 ---------PPALRAIAPQEGVW 132 (550)
T ss_pred ---------CCceeEEeecCccc
Confidence 13688888776653
No 129
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=90.07 E-value=0.61 Score=48.25 Aligned_cols=111 Identities=14% Similarity=0.181 Sum_probs=59.7
Q ss_pred CCCcccccccCCCcccchhhHHHHHHHHHHHcCCccccceeecCCCCCC-Cchhhh-------hhHHHHHHHHHHHHHHH
Q 008645 113 SGLSAITELDPGYITGPLSSVWKEWVKWCIEFGIEANSIIAAPYDWRLS-PSKLEE-------RDLYFHKLKLTFETALK 184 (558)
Q Consensus 113 ~G~~aie~Ldp~~~~~~~~~~y~~li~~L~~~GY~~~~L~gapYDWRls-~~~~e~-------~d~y~~~Lk~lIE~~~~ 184 (558)
-|.+-+-.|--++. ...++|..+++++...||. ..||-=.... +...++ .+-+-+.|++++-.-.+
T Consensus 43 ~G~yPVilF~HG~~--l~ns~Ys~lL~HIASHGfI----VVAPQl~~~~~p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~ 116 (307)
T PF07224_consen 43 AGTYPVILFLHGFN--LYNSFYSQLLAHIASHGFI----VVAPQLYTLFPPDGQDEIKSAASVINWLPEGLQHVLPENVE 116 (307)
T ss_pred CCCccEEEEeechh--hhhHHHHHHHHHHhhcCeE----EEechhhcccCCCchHHHHHHHHHHHHHHhhhhhhCCCCcc
Confidence 45443333333442 2356999999999999993 2333222222 222111 11112223332222223
Q ss_pred hcCCcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCCCchh
Q 008645 185 LRGGPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGATQ 241 (558)
Q Consensus 185 ~~g~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs~~ 241 (558)
-+..|+.|+|||.||-.|...--... .+-.++++|-| -|..|..|
T Consensus 117 ~nl~klal~GHSrGGktAFAlALg~a-----------~~lkfsaLIGi-DPV~G~~k 161 (307)
T PF07224_consen 117 ANLSKLALSGHSRGGKTAFALALGYA-----------TSLKFSALIGI-DPVAGTSK 161 (307)
T ss_pred cccceEEEeecCCccHHHHHHHhccc-----------ccCchhheecc-cccCCCCC
Confidence 33348999999999998865432211 23357888887 67777665
No 130
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=89.96 E-value=0.33 Score=48.00 Aligned_cols=50 Identities=18% Similarity=0.195 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCC
Q 008645 173 HKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSP 235 (558)
Q Consensus 173 ~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P 235 (558)
+.|...|++.+.....+..|.||||||+.+++++-.. | ....+++++|+-
T Consensus 100 ~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~-----P--------d~F~~~~~~S~~ 149 (251)
T PF00756_consen 100 EELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRH-----P--------DLFGAVIAFSGA 149 (251)
T ss_dssp THHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHS-----T--------TTESEEEEESEE
T ss_pred ccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhC-----c--------cccccccccCcc
Confidence 4677777777765544578999999999999876542 1 257888888743
No 131
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=89.14 E-value=0.87 Score=48.43 Aligned_cols=53 Identities=21% Similarity=0.250 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHhcCC---cEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEe--cCCC
Q 008645 173 HKLKLTFETALKLRGG---PSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAV--GSPF 236 (558)
Q Consensus 173 ~~Lk~lIE~~~~~~g~---~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~l--g~P~ 236 (558)
+.|.++|+.+.+..|. +++|||||||+.|+=+.-+.++. .+.|.+++.| |+|.
T Consensus 132 ~~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~-----------~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 132 RQLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKG-----------GGKIGRITGLDPAGPL 189 (331)
T ss_dssp HHHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT--------------SSEEEEES-B-TT
T ss_pred HHHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccC-----------cceeeEEEecCccccc
Confidence 4566666666644443 79999999999999877666531 3469999998 5554
No 132
>PLN02802 triacylglycerol lipase
Probab=89.12 E-value=0.59 Score=52.22 Aligned_cols=50 Identities=22% Similarity=0.211 Sum_probs=32.7
Q ss_pred cEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCCCchhhhhhh
Q 008645 189 PSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGATQSVKAT 246 (558)
Q Consensus 189 ~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs~~al~~l 246 (558)
+|+|.||||||-+|......+.... .+...-.+++.|+|--|-..-...+
T Consensus 331 sI~VTGHSLGGALAtLaA~dL~~~~--------~~~~pV~vyTFGsPRVGN~aFA~~~ 380 (509)
T PLN02802 331 SITVTGHSLGAALALLVADELATCV--------PAAPPVAVFSFGGPRVGNRAFADRL 380 (509)
T ss_pred eEEEeccchHHHHHHHHHHHHHHhC--------CCCCceEEEEcCCCCcccHHHHHHH
Confidence 6899999999999986655543211 1111125889999988866554444
No 133
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=88.86 E-value=1.3 Score=45.44 Aligned_cols=67 Identities=22% Similarity=0.269 Sum_probs=46.0
Q ss_pred eecCCCCC---CCchhhhhhHHHHHHHHHHHHHHHhcC--CcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhc
Q 008645 153 AAPYDWRL---SPSKLEERDLYFHKLKLTFETALKLRG--GPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIH 227 (558)
Q Consensus 153 gapYDWRl---s~~~~e~~d~y~~~Lk~lIE~~~~~~g--~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~ 227 (558)
-+.||+|- +....-+. ..++++++..|-+.+.+| .+|+|+|||||...+.+++.. .. ++
T Consensus 91 v~~~DYSGyG~S~G~psE~-n~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr--------------~~-~~ 154 (258)
T KOG1552|consen 91 VVSYDYSGYGRSSGKPSER-NLYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASR--------------YP-LA 154 (258)
T ss_pred EEEEecccccccCCCcccc-cchhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhc--------------CC-cc
Confidence 44566654 33332233 356789999998888886 379999999999997665543 23 78
Q ss_pred eEEEecCCC
Q 008645 228 AYFAVGSPF 236 (558)
Q Consensus 228 ~~I~lg~P~ 236 (558)
++|.. +|+
T Consensus 155 alVL~-SPf 162 (258)
T KOG1552|consen 155 AVVLH-SPF 162 (258)
T ss_pred eEEEe-ccc
Confidence 89977 444
No 134
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=88.39 E-value=2.2 Score=46.78 Aligned_cols=87 Identities=14% Similarity=0.112 Sum_probs=50.6
Q ss_pred HHHHHHHHHcCCccccceeec--CC--CCCCCchhhhhhHHH----HHHHHHHHHHHHhc-C-CcEEEEEeCCCcHHHHH
Q 008645 135 KEWVKWCIEFGIEANSIIAAP--YD--WRLSPSKLEERDLYF----HKLKLTFETALKLR-G-GPSLVLAHSLGNNVFRY 204 (558)
Q Consensus 135 ~~li~~L~~~GY~~~~L~gap--YD--WRls~~~~e~~d~y~----~~Lk~lIE~~~~~~-g-~~VvLIaHSMGGlva~~ 204 (558)
..++++|.+.|.-.--+..++ .| .|.. ++...+.|. +.|.-.|++.|... + ...+|.|+||||+.+++
T Consensus 227 ~~~ld~li~~g~i~P~ivV~id~~~~~~R~~--el~~~~~f~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~ 304 (411)
T PRK10439 227 WPALDSLTHRGQLPPAVYLLIDAIDTTHRSQ--ELPCNADFWLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALY 304 (411)
T ss_pred HHHHHHHHHcCCCCceEEEEECCCCcccccc--cCCchHHHHHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHH
Confidence 456778888887432222232 22 3431 111122333 55666666665432 2 36889999999999998
Q ss_pred HHHHhhccCCCccchhhhhhhhceEEEecCCC
Q 008645 205 FLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPF 236 (558)
Q Consensus 205 fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~ 236 (558)
..-.. | ....+++++|+.+
T Consensus 305 ~al~~-----P--------d~Fg~v~s~Sgs~ 323 (411)
T PRK10439 305 AGLHW-----P--------ERFGCVLSQSGSF 323 (411)
T ss_pred HHHhC-----c--------ccccEEEEeccce
Confidence 75432 1 2578899998654
No 135
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=88.15 E-value=2.3 Score=43.91 Aligned_cols=109 Identities=15% Similarity=0.143 Sum_probs=59.0
Q ss_pred CCCcccccccCCCcccchhhHHHHHHHHHHHcCCc--cccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhc----
Q 008645 113 SGLSAITELDPGYITGPLSSVWKEWVKWCIEFGIE--ANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLR---- 186 (558)
Q Consensus 113 ~G~~aie~Ldp~~~~~~~~~~y~~li~~L~~~GY~--~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~---- 186 (558)
-|.+.+-.|..++. .....|..+++++.++||. +-+++. ... +....+ -+.+.++.+++++-.+..
T Consensus 14 ~g~yPVv~f~~G~~--~~~s~Ys~ll~hvAShGyIVV~~d~~~----~~~-~~~~~~-~~~~~~vi~Wl~~~L~~~l~~~ 85 (259)
T PF12740_consen 14 AGTYPVVLFLHGFL--LINSWYSQLLEHVASHGYIVVAPDLYS----IGG-PDDTDE-VASAAEVIDWLAKGLESKLPLG 85 (259)
T ss_pred CCCcCEEEEeCCcC--CCHHHHHHHHHHHHhCceEEEEecccc----cCC-CCcchh-HHHHHHHHHHHHhcchhhcccc
Confidence 34555555666654 2334599999999999995 223322 111 111111 122333333333211111
Q ss_pred ---C-CcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCCC
Q 008645 187 ---G-GPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLG 238 (558)
Q Consensus 187 ---g-~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~G 238 (558)
+ .++.|.|||-||-++.......... .. +..++++|.| -|..|
T Consensus 86 v~~D~s~l~l~GHSrGGk~Af~~al~~~~~-----~~---~~~~~ali~l-DPVdG 132 (259)
T PF12740_consen 86 VKPDFSKLALAGHSRGGKVAFAMALGNASS-----SL---DLRFSALILL-DPVDG 132 (259)
T ss_pred ccccccceEEeeeCCCCHHHHHHHhhhccc-----cc---ccceeEEEEe-ccccc
Confidence 1 2789999999999986544322110 00 2368899988 66665
No 136
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=87.95 E-value=1.1 Score=43.90 Aligned_cols=57 Identities=11% Similarity=0.058 Sum_probs=40.4
Q ss_pred hhHHHHHHHHHHHHHHHhc--CCcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCC
Q 008645 168 RDLYFHKLKLTFETALKLR--GGPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFL 237 (558)
Q Consensus 168 ~d~y~~~Lk~lIE~~~~~~--g~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~ 237 (558)
.....+.|.++|++..+.. ..+|+|+|.|+||.++.+++.... +.+.++|.+++-+.
T Consensus 83 i~~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p-------------~~~~gvv~lsG~~~ 141 (216)
T PF02230_consen 83 IEESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYP-------------EPLAGVVALSGYLP 141 (216)
T ss_dssp HHHHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTS-------------STSSEEEEES---T
T ss_pred HHHHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcC-------------cCcCEEEEeecccc
Confidence 3456778888888776543 237999999999999988876421 25889999977653
No 137
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=87.89 E-value=2.2 Score=39.80 Aligned_cols=38 Identities=18% Similarity=0.199 Sum_probs=26.7
Q ss_pred CCcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecC
Q 008645 187 GGPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGS 234 (558)
Q Consensus 187 g~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~ 234 (558)
++|++|+||||||.++......+... ...+.+++.+.+
T Consensus 63 ~~~~~l~g~s~Gg~~a~~~a~~l~~~----------~~~~~~l~~~~~ 100 (212)
T smart00824 63 GRPFVLVGHSSGGLLAHAVAARLEAR----------GIPPAAVVLLDT 100 (212)
T ss_pred CCCeEEEEECHHHHHHHHHHHHHHhC----------CCCCcEEEEEcc
Confidence 45899999999999997776654321 124677776644
No 138
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=87.06 E-value=0.13 Score=55.70 Aligned_cols=46 Identities=26% Similarity=0.353 Sum_probs=33.8
Q ss_pred CcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhh--ceEEEecCCCCCc
Q 008645 188 GPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHI--HAYFAVGSPFLGA 239 (558)
Q Consensus 188 ~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I--~~~I~lg~P~~Gs 239 (558)
.++-.||||+|||++||...++-.. ..|....+ ..++++++|++|-
T Consensus 150 ~kISfvghSLGGLvar~AIgyly~~------~~~~f~~v~p~~fitlasp~~gI 197 (405)
T KOG4372|consen 150 EKISFVGHSLGGLVARYAIGYLYEK------APDFFSDVEPVNFITLASPKLGI 197 (405)
T ss_pred ceeeeeeeecCCeeeeEEEEeeccc------ccccccccCcchhhhhcCCCccc
Confidence 3888999999999999988765321 12333334 4899999999874
No 139
>PLN03037 lipase class 3 family protein; Provisional
Probab=85.26 E-value=1.4 Score=49.54 Aligned_cols=64 Identities=17% Similarity=0.126 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHhcCC--cEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCCCchhh
Q 008645 170 LYFHKLKLTFETALKLRGG--PSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGATQS 242 (558)
Q Consensus 170 ~y~~~Lk~lIE~~~~~~g~--~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs~~a 242 (558)
+.++.++++++. |...+. +++|.||||||-+|..+.-.+.... .....-.+++.|+|-.|-..-
T Consensus 299 QVl~eV~rLv~~-Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~~--------p~~~~VtvyTFGsPRVGN~aF 364 (525)
T PLN03037 299 QVMEEVKRLVNF-FKDRGEEVSLTITGHSLGGALALLNAYEAARSV--------PALSNISVISFGAPRVGNLAF 364 (525)
T ss_pred HHHHHHHHHHHh-ccccCCcceEEEeccCHHHHHHHHHHHHHHHhC--------CCCCCeeEEEecCCCccCHHH
Confidence 344555555543 222233 6899999999999875543332110 011013478899998887653
No 140
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=84.85 E-value=2.4 Score=44.71 Aligned_cols=114 Identities=20% Similarity=0.212 Sum_probs=66.0
Q ss_pred CCCCCCCCccc-CCCCCCcccccccCCCcccchhhHHHHHHHHHHHcCCccccceeecC-CCCCCCch------------
Q 008645 99 YNQTDNPECKS-RPDSGLSAITELDPGYITGPLSSVWKEWVKWCIEFGIEANSIIAAPY-DWRLSPSK------------ 164 (558)
Q Consensus 99 ~n~~~~pGv~i-rP~~G~~aie~Ldp~~~~~~~~~~y~~li~~L~~~GY~~~~L~gapY-DWRls~~~------------ 164 (558)
.+..+.-|+-| .|+.|..+-- | ..-+.|.+.|-+.||..-.| ..|. ++...+..
T Consensus 81 ~~~~~~~G~vIilp~~g~~~d~---p--------~~i~~LR~~L~~~GW~Tlsi-t~P~~~~~~~p~~~~~~~~~~~a~~ 148 (310)
T PF12048_consen 81 ANSAKPQGAVIILPDWGEHPDW---P--------GLIAPLRRELPDHGWATLSI-TLPDPAPPASPNRATEAEEVPSAGD 148 (310)
T ss_pred ccCCCCceEEEEecCCCCCCCc---H--------hHHHHHHHHhhhcCceEEEe-cCCCcccccCCccCCCCCCCCCCCC
Confidence 44445567664 5887753211 1 14567889999999964222 1111 12211110
Q ss_pred -----------------hhhhhHHHHHHHHHHHHHHH---hcCC-cEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhh
Q 008645 165 -----------------LEERDLYFHKLKLTFETALK---LRGG-PSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLD 223 (558)
Q Consensus 165 -----------------~e~~d~y~~~Lk~lIE~~~~---~~g~-~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkd 223 (558)
.+.+..|.+++...|+.+.+ ..+. .++||||++|+.++..||.... .
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~------------~ 216 (310)
T PF12048_consen 149 QQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKP------------P 216 (310)
T ss_pred CCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCC------------C
Confidence 02334555556655555543 2344 4999999999999888887421 1
Q ss_pred hhhceEEEecCCC
Q 008645 224 EHIHAYFAVGSPF 236 (558)
Q Consensus 224 k~I~~~I~lg~P~ 236 (558)
..++++|+|++-+
T Consensus 217 ~~~daLV~I~a~~ 229 (310)
T PF12048_consen 217 PMPDALVLINAYW 229 (310)
T ss_pred cccCeEEEEeCCC
Confidence 2488999997665
No 141
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=83.99 E-value=2.6 Score=42.43 Aligned_cols=57 Identities=25% Similarity=0.362 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCC
Q 008645 172 FHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPF 236 (558)
Q Consensus 172 ~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~ 236 (558)
.+.|.+.|+...+ .++||+|+|+|+|+.|+...|+.+.....+ .. ..-+||.+|-|.
T Consensus 33 ~~~L~~ai~~~~~-~~~~vvV~GySQGA~Va~~~~~~l~~~~~~---~~----~~l~fVl~gnP~ 89 (225)
T PF08237_consen 33 VANLDAAIRAAIA-AGGPVVVFGYSQGAVVASNVLRRLAADGDP---PP----DDLSFVLIGNPR 89 (225)
T ss_pred HHHHHHHHHhhcc-CCCCEEEEEECHHHHHHHHHHHHHHhcCCC---Cc----CceEEEEecCCC
Confidence 4556666665443 567999999999999999999877542111 11 234699998884
No 142
>PLN02324 triacylglycerol lipase
Probab=83.89 E-value=1.5 Score=48.07 Aligned_cols=72 Identities=24% Similarity=0.109 Sum_probs=35.8
Q ss_pred hHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHHHHhhccCCCccch-hhhhhhhceEEEecCCCCCchh
Q 008645 169 DLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYI-KWLDEHIHAYFAVGSPFLGATQ 241 (558)
Q Consensus 169 d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~-~Wkdk~I~~~I~lg~P~~Gs~~ 241 (558)
++..+.|+++++. |......|++.||||||-+|....-.+......+... .-....--.+++.|+|--|-..
T Consensus 197 eqVl~eV~~L~~~-Yp~e~~sItvTGHSLGGALAtLaA~dl~~~~~n~~~~~~~~~~~~V~v~TFGsPRVGN~~ 269 (415)
T PLN02324 197 EQVQGELKRLLEL-YKNEEISITFTGHSLGAVMSVLSAADLVYGKKNKINISLQKKQVPITVFAFGSPRIGDHN 269 (415)
T ss_pred HHHHHHHHHHHHH-CCCCCceEEEecCcHHHHHHHHHHHHHHHhcccccccccccCCCceEEEEecCCCcCCHH
Confidence 4445555555542 2111236899999999999876544332100000000 0000111237788888777554
No 143
>PLN02719 triacylglycerol lipase
Probab=83.08 E-value=1.7 Score=48.69 Aligned_cols=54 Identities=19% Similarity=0.039 Sum_probs=31.2
Q ss_pred cEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCCCchhhhh
Q 008645 189 PSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGATQSVK 244 (558)
Q Consensus 189 ~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs~~al~ 244 (558)
+|+|.||||||-+|....-.+...... .....+...| .+++.|+|=-|-..-..
T Consensus 299 sItVTGHSLGGALAtLaA~Dl~~~gln-~~~~~~~~pV-tvyTFGsPRVGN~~Fa~ 352 (518)
T PLN02719 299 SITVTGHSLGGALAVLSAYDVAEMGLN-RTRKGKVIPV-TAFTYGGPRVGNIRFKE 352 (518)
T ss_pred eEEEecCcHHHHHHHHHHHHHHHhccc-ccccccccce-EEEEecCCCccCHHHHH
Confidence 789999999999987654444211000 0011111123 37889999877665443
No 144
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=82.55 E-value=7.3 Score=41.70 Aligned_cols=100 Identities=16% Similarity=0.185 Sum_probs=69.1
Q ss_pred hhhHHHHHHHHHHHcCCccccceeecCCCCCCCch--hhhhhHHHHHHHHHHHHHHHhcC---CcEEEEEeCCCcHHHHH
Q 008645 130 LSSVWKEWVKWCIEFGIEANSIIAAPYDWRLSPSK--LEERDLYFHKLKLTFETALKLRG---GPSLVLAHSLGNNVFRY 204 (558)
Q Consensus 130 ~~~~y~~li~~L~~~GY~~~~L~gapYDWRls~~~--~e~~d~y~~~Lk~lIE~~~~~~g---~~VvLIaHSMGGlva~~ 204 (558)
.+..|+.+...+++ .-+.+...=|+|++|.+ ....++-...|+-+.++.....+ .+|+|.|-|-||.+|.+
T Consensus 107 ~~~~y~~~~~~~a~----~~~~vvvSVdYRLAPEh~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~ 182 (336)
T KOG1515|consen 107 NSPAYDSFCTRLAA----ELNCVVVSVDYRLAPEHPFPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHV 182 (336)
T ss_pred CCchhHHHHHHHHH----HcCeEEEecCcccCCCCCCCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHH
Confidence 46688998888864 23467778899999876 34556667778877776333232 36999999999999988
Q ss_pred HHHHhhccCCCccchhhhhhhhceEEEecCCCCCch
Q 008645 205 FLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGAT 240 (558)
Q Consensus 205 fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs~ 240 (558)
.-++...+. --.-+|++.|.+-+-+.|..
T Consensus 183 va~r~~~~~-------~~~~ki~g~ili~P~~~~~~ 211 (336)
T KOG1515|consen 183 VAQRAADEK-------LSKPKIKGQILIYPFFQGTD 211 (336)
T ss_pred HHHHHhhcc-------CCCcceEEEEEEecccCCCC
Confidence 777654320 11237999999954444433
No 145
>PRK04940 hypothetical protein; Provisional
Probab=82.45 E-value=1.9 Score=42.20 Aligned_cols=38 Identities=16% Similarity=0.105 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHhc-CCcEEEEEeCCCcHHHHHHHHHh
Q 008645 172 FHKLKLTFETALKLR-GGPSLVLAHSLGNNVFRYFLEWL 209 (558)
Q Consensus 172 ~~~Lk~lIE~~~~~~-g~~VvLIaHSMGGlva~~fL~~~ 209 (558)
.+.|.++|++..... .+++.|||+||||..|.++-+..
T Consensus 43 ~~~l~~~i~~~~~~~~~~~~~liGSSLGGyyA~~La~~~ 81 (180)
T PRK04940 43 MQHLLKEVDKMLQLSDDERPLICGVGLGGYWAERIGFLC 81 (180)
T ss_pred HHHHHHHHHHhhhccCCCCcEEEEeChHHHHHHHHHHHH
Confidence 344555665433222 15899999999999998776653
No 146
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=82.23 E-value=6.3 Score=40.68 Aligned_cols=90 Identities=16% Similarity=0.113 Sum_probs=51.8
Q ss_pred cccccccCCCcc-cchhhHHHHHHHHHHHcCCccccceeecCCCCCCCchh--hhhhHHHHHHHHHHHHHHHhc--CCcE
Q 008645 116 SAITELDPGYIT-GPLSSVWKEWVKWCIEFGIEANSIIAAPYDWRLSPSKL--EERDLYFHKLKLTFETALKLR--GGPS 190 (558)
Q Consensus 116 ~aie~Ldp~~~~-~~~~~~y~~li~~L~~~GY~~~~L~gapYDWRls~~~~--e~~d~y~~~Lk~lIE~~~~~~--g~~V 190 (558)
..|=|+--|.|. +........+...+...||. ...-|+|++|... ...++-...++.+.+++-+.. .++|
T Consensus 80 p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~-----vv~vdYrlaPe~~~p~~~~d~~~a~~~l~~~~~~~g~dp~~i 154 (312)
T COG0657 80 PVVLYLHGGGWVLGSLRTHDALVARLAAAAGAV-----VVSVDYRLAPEHPFPAALEDAYAAYRWLRANAAELGIDPSRI 154 (312)
T ss_pred cEEEEEeCCeeeecChhhhHHHHHHHHHHcCCE-----EEecCCCCCCCCCCCchHHHHHHHHHHHHhhhHhhCCCccce
Confidence 344454444332 22222223444555578875 4566889988762 122333444555555443222 2479
Q ss_pred EEEEeCCCcHHHHHHHHHhh
Q 008645 191 LVLAHSLGNNVFRYFLEWLK 210 (558)
Q Consensus 191 vLIaHSMGGlva~~fL~~~~ 210 (558)
+|.|||-||.++..+.....
T Consensus 155 ~v~GdSAGG~La~~~a~~~~ 174 (312)
T COG0657 155 AVAGDSAGGHLALALALAAR 174 (312)
T ss_pred EEEecCcccHHHHHHHHHHH
Confidence 99999999999988877543
No 147
>PLN02847 triacylglycerol lipase
Probab=81.78 E-value=1.4 Score=50.25 Aligned_cols=34 Identities=18% Similarity=0.069 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHhcC-CcEEEEEeCCCcHHHHHHH
Q 008645 173 HKLKLTFETALKLRG-GPSLVLAHSLGNNVFRYFL 206 (558)
Q Consensus 173 ~~Lk~lIE~~~~~~g-~~VvLIaHSMGGlva~~fL 206 (558)
..+...|.++.+.+. -+++|+||||||-+|-..-
T Consensus 235 ~~i~~~L~kal~~~PdYkLVITGHSLGGGVAALLA 269 (633)
T PLN02847 235 KLSTPCLLKALDEYPDFKIKIVGHSLGGGTAALLT 269 (633)
T ss_pred HHHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHH
Confidence 344455556666664 4999999999999986543
No 148
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=80.06 E-value=2.4 Score=43.26 Aligned_cols=67 Identities=16% Similarity=0.233 Sum_probs=41.9
Q ss_pred hHHHHHHHHHHHcCCccccceeecCCCCCCCch----h---h-hhhH-HHHHHHHHHHHHHHhc-CCcEEEEEeCCCcHH
Q 008645 132 SVWKEWVKWCIEFGIEANSIIAAPYDWRLSPSK----L---E-ERDL-YFHKLKLTFETALKLR-GGPSLVLAHSLGNNV 201 (558)
Q Consensus 132 ~~y~~li~~L~~~GY~~~~L~gapYDWRls~~~----~---e-~~d~-y~~~Lk~lIE~~~~~~-g~~VvLIaHSMGGlv 201 (558)
.+|..+++.+.+.||+. .-||+|-.-.. + + .+.+ -..++-..|+.+.+.- +.|...|||||||..
T Consensus 44 ~fYRrfA~~a~~~Gf~V-----lt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa 118 (281)
T COG4757 44 YFYRRFAAAAAKAGFEV-----LTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQA 118 (281)
T ss_pred hHhHHHHHHhhccCceE-----EEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhhCCCCceEEeecccccee
Confidence 37899999999999973 34555532110 0 0 0011 1234566666665533 559999999999987
Q ss_pred HH
Q 008645 202 FR 203 (558)
Q Consensus 202 a~ 203 (558)
.=
T Consensus 119 ~g 120 (281)
T COG4757 119 LG 120 (281)
T ss_pred ec
Confidence 63
No 149
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=79.73 E-value=5.9 Score=48.77 Aligned_cols=90 Identities=13% Similarity=0.065 Sum_probs=48.6
Q ss_pred hhhHHHHHHHHHHHcCCccccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHHHHh
Q 008645 130 LSSVWKEWVKWCIEFGIEANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFLEWL 209 (558)
Q Consensus 130 ~~~~y~~li~~L~~~GY~~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL~~~ 209 (558)
....|..+++.|.. +|....+.....+-+... ....+.+.+++...|.... -.+|++|+||||||.++..+...+
T Consensus 1080 ~~~~~~~l~~~l~~-~~~v~~~~~~g~~~~~~~--~~~l~~la~~~~~~i~~~~--~~~p~~l~G~S~Gg~vA~e~A~~l 1154 (1296)
T PRK10252 1080 FAWQFSVLSRYLDP-QWSIYGIQSPRPDGPMQT--ATSLDEVCEAHLATLLEQQ--PHGPYHLLGYSLGGTLAQGIAARL 1154 (1296)
T ss_pred chHHHHHHHHhcCC-CCcEEEEECCCCCCCCCC--CCCHHHHHHHHHHHHHhhC--CCCCEEEEEechhhHHHHHHHHHH
Confidence 45688899888854 232111111111212111 1122344444444444321 134899999999999998887655
Q ss_pred hccCCCccchhhhhhhhceEEEecC
Q 008645 210 KLEIPPKQYIKWLDEHIHAYFAVGS 234 (558)
Q Consensus 210 ~~~~~~~~~~~Wkdk~I~~~I~lg~ 234 (558)
... -..+..++.+++
T Consensus 1155 ~~~----------~~~v~~l~l~~~ 1169 (1296)
T PRK10252 1155 RAR----------GEEVAFLGLLDT 1169 (1296)
T ss_pred HHc----------CCceeEEEEecC
Confidence 321 125777777754
No 150
>PLN02761 lipase class 3 family protein
Probab=79.63 E-value=2.8 Score=47.17 Aligned_cols=52 Identities=17% Similarity=0.065 Sum_probs=28.5
Q ss_pred cEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhh-ceEEEecCCCCCchhh
Q 008645 189 PSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHI-HAYFAVGSPFLGATQS 242 (558)
Q Consensus 189 ~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I-~~~I~lg~P~~Gs~~a 242 (558)
+|++.||||||-+|....-.+......+ ... ....+ -.+++.|+|=-|-..-
T Consensus 295 sItVTGHSLGGALAtLaA~DIa~~gln~-~~~-~~~~~PVtv~TFGsPRVGN~~F 347 (527)
T PLN02761 295 SITVTGHSLGASLALVSAYDIAELNLNH-VPE-NNYKIPITVFSFSGPRVGNLRF 347 (527)
T ss_pred eEEEeccchHHHHHHHHHHHHHHhcccc-ccc-cccCCceEEEEcCCCCcCCHHH
Confidence 6999999999999875544332100000 000 00111 1378888887765543
No 151
>PLN02753 triacylglycerol lipase
Probab=78.37 E-value=4 Score=46.01 Aligned_cols=52 Identities=19% Similarity=0.084 Sum_probs=30.5
Q ss_pred CcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhc-eEEEecCCCCCchhh
Q 008645 188 GPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIH-AYFAVGSPFLGATQS 242 (558)
Q Consensus 188 ~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~-~~I~lg~P~~Gs~~a 242 (558)
.+|++.||||||-+|..+.-.+......+ ... .+.+. .+++.|+|=-|-..-
T Consensus 312 ~sItVTGHSLGGALAtLaA~Dla~~g~n~-~~~--~~~~pV~vyTFGsPRVGN~aF 364 (531)
T PLN02753 312 LSITVTGHSLGGALAILSAYDIAEMGLNR-SKK--GKVIPVTVLTYGGPRVGNVRF 364 (531)
T ss_pred ceEEEEccCHHHHHHHHHHHHHHHhcccc-ccc--CccCceEEEEeCCCCccCHHH
Confidence 47999999999999876654432110000 000 11121 488899998775543
No 152
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=77.58 E-value=4.7 Score=44.81 Aligned_cols=41 Identities=7% Similarity=-0.021 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHHhc----CCcEEEEEeCCCcHHHHHHHHHhh
Q 008645 170 LYFHKLKLTFETALKLR----GGPSLVLAHSLGNNVFRYFLEWLK 210 (558)
Q Consensus 170 ~y~~~Lk~lIE~~~~~~----g~~VvLIaHSMGGlva~~fL~~~~ 210 (558)
+..+++.+.++..+++. ..|++|+||||||.++..+...+.
T Consensus 149 ~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~ 193 (462)
T PTZ00472 149 EVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRIN 193 (462)
T ss_pred HHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHH
Confidence 45566666666665433 358999999999999999888653
No 153
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=77.49 E-value=3.9 Score=43.55 Aligned_cols=57 Identities=21% Similarity=0.154 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHhc-CCcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCCC
Q 008645 171 YFHKLKLTFETALKLR-GGPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLG 238 (558)
Q Consensus 171 y~~~Lk~lIE~~~~~~-g~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~G 238 (558)
+.+.++.+++ .+ +-.|.+-||||||-+|..+-..+... ..+...--++++.|.|=-|
T Consensus 157 ~~~~~~~L~~----~~~~~~i~vTGHSLGgAlA~laa~~i~~~-------~~~~~~~v~v~tFG~PRvG 214 (336)
T KOG4569|consen 157 LDAELRRLIE----LYPNYSIWVTGHSLGGALASLAALDLVKN-------GLKTSSPVKVYTFGQPRVG 214 (336)
T ss_pred HHHHHHHHHH----hcCCcEEEEecCChHHHHHHHHHHHHHHc-------CCCCCCceEEEEecCCCcc
Confidence 4444455444 34 34899999999999987665543221 1112234478888888544
No 154
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=77.40 E-value=8.8 Score=38.75 Aligned_cols=77 Identities=8% Similarity=0.002 Sum_probs=50.7
Q ss_pred hHHHHHHHHHHHcCCcc--ccceeecCCCCCCC---chhhh-------hhHHHHHHHHHHHHHHHhc---CCcEEEEEeC
Q 008645 132 SVWKEWVKWCIEFGIEA--NSIIAAPYDWRLSP---SKLEE-------RDLYFHKLKLTFETALKLR---GGPSLVLAHS 196 (558)
Q Consensus 132 ~~y~~li~~L~~~GY~~--~~L~gapYDWRls~---~~~e~-------~d~y~~~Lk~lIE~~~~~~---g~~VvLIaHS 196 (558)
.....+.+.|.+.||.. -||+...-+..... ...+. ..+...++...++.+.++. ..+|.++|.|
T Consensus 41 ~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC 120 (236)
T COG0412 41 PHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFC 120 (236)
T ss_pred hHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEc
Confidence 36788999999999963 46666444333322 11111 1345666777777766544 3479999999
Q ss_pred CCcHHHHHHHHH
Q 008645 197 LGNNVFRYFLEW 208 (558)
Q Consensus 197 MGGlva~~fL~~ 208 (558)
|||.++..+...
T Consensus 121 ~GG~~a~~~a~~ 132 (236)
T COG0412 121 MGGGLALLAATR 132 (236)
T ss_pred ccHHHHHHhhcc
Confidence 999999877653
No 155
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=77.37 E-value=2.6 Score=41.77 Aligned_cols=52 Identities=13% Similarity=0.141 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCC
Q 008645 171 YFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPF 236 (558)
Q Consensus 171 y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~ 236 (558)
||++-.+.+.+--+-.+++|.|+|.|.||-+|+..-..+ ..|+++|+++++.
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~--------------~~i~avVa~~ps~ 56 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRF--------------PQISAVVAISPSS 56 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHS--------------SSEEEEEEES--S
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcC--------------CCccEEEEeCCce
Confidence 565555554433223346899999999999998766553 2699999997664
No 156
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=72.64 E-value=5.1 Score=40.35 Aligned_cols=98 Identities=16% Similarity=0.180 Sum_probs=55.5
Q ss_pred HHHHHHHcCCccccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcCC-cEE-EEEeCCCcHHHHHHHHHhhccCC
Q 008645 137 WVKWCIEFGIEANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRGG-PSL-VLAHSLGNNVFRYFLEWLKLEIP 214 (558)
Q Consensus 137 li~~L~~~GY~~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g~-~Vv-LIaHSMGGlva~~fL~~~~~~~~ 214 (558)
++.-+.+.||. +....||. ++..- ...+..++.-.-+.-+++.+.. |++ +-|||.|+-++...+.+..
T Consensus 89 iv~~a~~~gY~---vasvgY~l--~~q~h-tL~qt~~~~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r---- 158 (270)
T KOG4627|consen 89 IVGPAVRRGYR---VASVGYNL--CPQVH-TLEQTMTQFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQR---- 158 (270)
T ss_pred hhhhhhhcCeE---EEEeccCc--Ccccc-cHHHHHHHHHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhc----
Confidence 45667788996 33445655 44320 1122344445555555565543 544 4599999999877776543
Q ss_pred CccchhhhhhhhceEEEecCCCCCchhhhhhhhcCCCCCC
Q 008645 215 PKQYIKWLDEHIHAYFAVGSPFLGATQSVKATLSGETSGL 254 (558)
Q Consensus 215 ~~~~~~Wkdk~I~~~I~lg~P~~Gs~~al~~llsG~~~gl 254 (558)
++.|.+++.+++-+. ..-+..+-+|...|+
T Consensus 159 --------~prI~gl~l~~GvY~--l~EL~~te~g~dlgL 188 (270)
T KOG4627|consen 159 --------SPRIWGLILLCGVYD--LRELSNTESGNDLGL 188 (270)
T ss_pred --------CchHHHHHHHhhHhh--HHHHhCCccccccCc
Confidence 357888887755441 222344445544444
No 157
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=68.67 E-value=8.6 Score=41.35 Aligned_cols=66 Identities=15% Similarity=0.091 Sum_probs=44.6
Q ss_pred HHHHHHcCCccccceeecCCCCCCCchh----hhhhHHHHHHHHHHHHHH------HhcCC-cEEEEEeCCCcHHHH
Q 008645 138 VKWCIEFGIEANSIIAAPYDWRLSPSKL----EERDLYFHKLKLTFETAL------KLRGG-PSLVLAHSLGNNVFR 203 (558)
Q Consensus 138 i~~L~~~GY~~~~L~gapYDWRls~~~~----e~~d~y~~~Lk~lIE~~~------~~~g~-~VvLIaHSMGGlva~ 203 (558)
..-|.+.|+..--|-..-|.-|++..+. ..-.+++..-..+|+++. +..|. |+.|.|-||||.+|-
T Consensus 114 a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl~~~G~~~~g~~G~SmGG~~A~ 190 (348)
T PF09752_consen 114 ARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWLEREGYGPLGLTGISMGGHMAA 190 (348)
T ss_pred hhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHHHhcCCCceEEEEechhHhhHH
Confidence 5667777986554555556888776652 223455655567777664 23354 899999999999985
No 158
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=68.49 E-value=9.5 Score=42.92 Aligned_cols=56 Identities=23% Similarity=0.253 Sum_probs=41.6
Q ss_pred CC-cEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCCCchhhh---hhhhcCC
Q 008645 187 GG-PSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGATQSV---KATLSGE 250 (558)
Q Consensus 187 g~-~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs~~al---~~llsG~ 250 (558)
|. ||.|||.|+|.-|..+.|..+.... --.-|+.+|.+|+|.-=..+.. +...+|.
T Consensus 445 G~RPVTLVGFSLGARvIf~CL~~Lakkk--------e~~iIEnViL~GaPv~~k~~~w~k~r~vVsGR 504 (633)
T KOG2385|consen 445 GNRPVTLVGFSLGARVIFECLLELAKKK--------EVGIIENVILFGAPVPTKAKLWLKARSVVSGR 504 (633)
T ss_pred CCCceeEeeeccchHHHHHHHHHHhhcc--------cccceeeeeeccCCccCCHHHHHHHHhheecc
Confidence 54 9999999999999998888664210 0136899999999987666653 4666775
No 159
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=66.85 E-value=16 Score=35.53 Aligned_cols=85 Identities=14% Similarity=0.084 Sum_probs=48.0
Q ss_pred hHHHHHHHHHHHcCCcc--ccceeecCCCCC-CCchh-hhh-----------hHHHHHHHHHHHHHHHhc---CCcEEEE
Q 008645 132 SVWKEWVKWCIEFGIEA--NSIIAAPYDWRL-SPSKL-EER-----------DLYFHKLKLTFETALKLR---GGPSLVL 193 (558)
Q Consensus 132 ~~y~~li~~L~~~GY~~--~~L~gapYDWRl-s~~~~-e~~-----------d~y~~~Lk~lIE~~~~~~---g~~VvLI 193 (558)
.....+.+.|.+.||.. -|++ +-+. .+... +.. +....+++..|+.+.+.. ..||.+|
T Consensus 28 ~~~~~~ad~lA~~Gy~v~~pD~f----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~~~~~~~kig~v 103 (218)
T PF01738_consen 28 PNIRDLADRLAEEGYVVLAPDLF----GGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQPEVDPGKIGVV 103 (218)
T ss_dssp HHHHHHHHHHHHTT-EEEEE-CC----CCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCTTTCEEEEEEEE
T ss_pred hHHHHHHHHHHhcCCCEEecccc----cCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhccccCCCcEEEE
Confidence 35678899999999953 2443 3332 11111 111 123344455555555443 2389999
Q ss_pred EeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecC
Q 008645 194 AHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGS 234 (558)
Q Consensus 194 aHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~ 234 (558)
|.|+||.++..+... ...+++.|+.-+
T Consensus 104 Gfc~GG~~a~~~a~~--------------~~~~~a~v~~yg 130 (218)
T PF01738_consen 104 GFCWGGKLALLLAAR--------------DPRVDAAVSFYG 130 (218)
T ss_dssp EETHHHHHHHHHHCC--------------TTTSSEEEEES-
T ss_pred EEecchHHhhhhhhh--------------ccccceEEEEcC
Confidence 999999999754432 125788887744
No 160
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=65.09 E-value=7.4 Score=40.89 Aligned_cols=39 Identities=18% Similarity=0.272 Sum_probs=30.2
Q ss_pred hhhhhHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCcHHHH
Q 008645 165 LEERDLYFHKLKLTFETALKLR-GGPSLVLAHSLGNNVFR 203 (558)
Q Consensus 165 ~e~~d~y~~~Lk~lIE~~~~~~-g~~VvLIaHSMGGlva~ 203 (558)
++++++|+...-...-...+.+ ...+.|.|||+||.+|.
T Consensus 252 ir~~dryySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~As 291 (425)
T KOG4540|consen 252 IREFDRYYSAALDILGAVRRIYPDARIWLTGHSLGGAIAS 291 (425)
T ss_pred HHhhcchhHHHHHHHHHHHHhCCCceEEEeccccchHHHH
Confidence 3466888888777776666666 34899999999999985
No 161
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=65.09 E-value=7.4 Score=40.89 Aligned_cols=39 Identities=18% Similarity=0.272 Sum_probs=30.2
Q ss_pred hhhhhHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCcHHHH
Q 008645 165 LEERDLYFHKLKLTFETALKLR-GGPSLVLAHSLGNNVFR 203 (558)
Q Consensus 165 ~e~~d~y~~~Lk~lIE~~~~~~-g~~VvLIaHSMGGlva~ 203 (558)
++++++|+...-...-...+.+ ...+.|.|||+||.+|.
T Consensus 252 ir~~dryySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~As 291 (425)
T COG5153 252 IREFDRYYSAALDILGAVRRIYPDARIWLTGHSLGGAIAS 291 (425)
T ss_pred HHhhcchhHHHHHHHHHHHHhCCCceEEEeccccchHHHH
Confidence 3466888888777776666666 34899999999999985
No 162
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=63.36 E-value=12 Score=37.58 Aligned_cols=53 Identities=13% Similarity=0.013 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHhcC---CcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCCCc
Q 008645 174 KLKLTFETALKLRG---GPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGA 239 (558)
Q Consensus 174 ~Lk~lIE~~~~~~g---~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs 239 (558)
.|+.+|+++.++.+ .+|.+.|+|+||.++..+.... | +.+.++..++++..|+
T Consensus 80 ~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~-----p--------d~faa~a~~sG~~~~~ 135 (220)
T PF10503_consen 80 FIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAY-----P--------DLFAAVAVVSGVPYGC 135 (220)
T ss_pred hHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhC-----C--------ccceEEEeeccccccc
Confidence 46667776665553 4899999999999997666532 1 2466666666655444
No 163
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=62.58 E-value=9.2 Score=38.73 Aligned_cols=43 Identities=28% Similarity=0.376 Sum_probs=29.6
Q ss_pred CcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCCCchhh
Q 008645 188 GPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGATQS 242 (558)
Q Consensus 188 ~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs~~a 242 (558)
.-|.+|+||.||..+...+.+... +..|.++-.--+| .|+++|
T Consensus 190 ~sv~vvahsyGG~~t~~l~~~f~~-----------d~~v~aialTDs~-~~~p~a 232 (297)
T KOG3967|consen 190 ESVFVVAHSYGGSLTLDLVERFPD-----------DESVFAIALTDSA-MGSPQA 232 (297)
T ss_pred ceEEEEEeccCChhHHHHHHhcCC-----------ccceEEEEeeccc-ccCchh
Confidence 358999999999999988886532 2345555544444 566665
No 164
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=61.46 E-value=7.2 Score=42.87 Aligned_cols=88 Identities=11% Similarity=0.106 Sum_probs=46.9
Q ss_pred HHHHHHHHHHcCCc--cccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHHHHHhhc
Q 008645 134 WKEWVKWCIEFGIE--ANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYFLEWLKL 211 (558)
Q Consensus 134 y~~li~~L~~~GY~--~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~fL~~~~~ 211 (558)
|.-+.+.|...|+. ..|+.|.++.-+....+ ..+...+.+-..+...-.-.-.+|.++|-||||.++...- .++
T Consensus 207 ~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~--D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA-~le- 282 (411)
T PF06500_consen 207 YRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQ--DSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLA-ALE- 282 (411)
T ss_dssp HHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S---CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHH-HHT-
T ss_pred HHHHHHHHHhCCCEEEEEccCCCcccccCCCCc--CHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHH-Hhc-
Confidence 44445678999995 46888888864443221 1123333333333322111223899999999999995432 222
Q ss_pred cCCCccchhhhhhhhceEEEecCCC
Q 008645 212 EIPPKQYIKWLDEHIHAYFAVGSPF 236 (558)
Q Consensus 212 ~~~~~~~~~Wkdk~I~~~I~lg~P~ 236 (558)
++.|+++|++|++.
T Consensus 283 -----------~~RlkavV~~Ga~v 296 (411)
T PF06500_consen 283 -----------DPRLKAVVALGAPV 296 (411)
T ss_dssp -----------TTT-SEEEEES---
T ss_pred -----------ccceeeEeeeCchH
Confidence 24799999998884
No 165
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=60.46 E-value=13 Score=31.19 Aligned_cols=49 Identities=14% Similarity=0.122 Sum_probs=33.9
Q ss_pred hhHHHHHHHHHHHcCCc--cccceeecCCCCCCCchhhhhhHHHHHHHHHHH
Q 008645 131 SSVWKEWVKWCIEFGIE--ANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFE 180 (558)
Q Consensus 131 ~~~y~~li~~L~~~GY~--~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE 180 (558)
+.-|..+++.|.+.||. ..|++|++..=. .......++++.++|..+||
T Consensus 29 ~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g-~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 29 SGRYAHLAEFLAEQGYAVFAYDHRGHGRSEG-KRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred HHHHHHHHHHHHhCCCEEEEECCCcCCCCCC-cccccCCHHHHHHHHHHHhC
Confidence 34699999999999995 357777766531 12223456778888887764
No 166
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=59.14 E-value=23 Score=38.43 Aligned_cols=19 Identities=26% Similarity=0.186 Sum_probs=15.7
Q ss_pred CcEEEEEeCCCcHHHHHHH
Q 008645 188 GPSLVLAHSLGNNVFRYFL 206 (558)
Q Consensus 188 ~~VvLIaHSMGGlva~~fL 206 (558)
+||.++|||+||--+.+.+
T Consensus 159 ~~Vgv~GhS~GG~T~m~la 177 (365)
T COG4188 159 QRVGVLGHSFGGYTAMELA 177 (365)
T ss_pred cceEEEecccccHHHHHhc
Confidence 3899999999999886543
No 167
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=58.25 E-value=22 Score=38.64 Aligned_cols=59 Identities=22% Similarity=0.322 Sum_probs=39.2
Q ss_pred HHHHHHHHHHH---HHHhcCC-cEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCCC
Q 008645 171 YFHKLKLTFET---ALKLRGG-PSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLG 238 (558)
Q Consensus 171 y~~~Lk~lIE~---~~~~~g~-~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~G 238 (558)
|-.+|.++++. ..+..|. .|+|+|-|.||..++.||+.+.... . ..+=++.|.| +||.-
T Consensus 174 yPtQL~qlv~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~----~----~~~Pk~~iLI-SPWv~ 236 (374)
T PF10340_consen 174 YPTQLRQLVATYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPN----K----LPYPKSAILI-SPWVN 236 (374)
T ss_pred CchHHHHHHHHHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcC----C----CCCCceeEEE-CCCcC
Confidence 45566666653 2323344 6999999999999999999886421 0 1123678877 88843
No 168
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=57.61 E-value=29 Score=34.65 Aligned_cols=84 Identities=8% Similarity=0.070 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHcCCc--cccceeecC---CCCCCCchhhhhhHHHHHHHHHHHHHHHhcCC-cE-EEEEeCCCcHHHHHH
Q 008645 133 VWKEWVKWCIEFGIE--ANSIIAAPY---DWRLSPSKLEERDLYFHKLKLTFETALKLRGG-PS-LVLAHSLGNNVFRYF 205 (558)
Q Consensus 133 ~y~~li~~L~~~GY~--~~~L~gapY---DWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g~-~V-vLIaHSMGGlva~~f 205 (558)
+-..+...|.+.||. +.|.++.+- +|+....+ .++.++.+.-+.+++-. ++ -|.|.|.|+.|+...
T Consensus 48 vv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE-------~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~l 120 (210)
T COG2945 48 VVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGE-------LEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQL 120 (210)
T ss_pred HHHHHHHHHHhCCceEEeecccccccccCcccCCcch-------HHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHH
Confidence 445677889999995 456666432 34444443 34667777777776744 66 577899999999877
Q ss_pred HHHhhccCCCccchhhhhhhhceEEEecCCCC
Q 008645 206 LEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFL 237 (558)
Q Consensus 206 L~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~ 237 (558)
+.... .+..+|++++|-.
T Consensus 121 a~r~~--------------e~~~~is~~p~~~ 138 (210)
T COG2945 121 AMRRP--------------EILVFISILPPIN 138 (210)
T ss_pred HHhcc--------------cccceeeccCCCC
Confidence 76542 4778888877763
No 169
>COG0400 Predicted esterase [General function prediction only]
Probab=57.05 E-value=21 Score=35.60 Aligned_cols=38 Identities=21% Similarity=0.086 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHhcCC---cEEEEEeCCCcHHHHHHHHHh
Q 008645 172 FHKLKLTFETALKLRGG---PSLVLAHSLGNNVFRYFLEWL 209 (558)
Q Consensus 172 ~~~Lk~lIE~~~~~~g~---~VvLIaHSMGGlva~~fL~~~ 209 (558)
.+++++.|+...+++|. +++++|+|-|+.++.+.+...
T Consensus 80 ~~~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~ 120 (207)
T COG0400 80 TEKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTL 120 (207)
T ss_pred HHHHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhC
Confidence 45677777777666664 899999999999999888653
No 170
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=54.44 E-value=22 Score=38.51 Aligned_cols=46 Identities=13% Similarity=0.120 Sum_probs=32.9
Q ss_pred hcCC-cEE-EEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCCCchhhh
Q 008645 185 LRGG-PSL-VLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGATQSV 243 (558)
Q Consensus 185 ~~g~-~Vv-LIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs~~al 243 (558)
.-|- ++. +||-||||+.++.+.... | ..|++.|.|+++..=++.++
T Consensus 142 ~LGI~~l~avvGgSmGGMqaleWa~~y-----P--------d~V~~~i~ia~~~r~s~~~i 189 (368)
T COG2021 142 ALGIKKLAAVVGGSMGGMQALEWAIRY-----P--------DRVRRAIPIATAARLSAQNI 189 (368)
T ss_pred hcCcceEeeeeccChHHHHHHHHHHhC-----h--------HHHhhhheecccccCCHHHH
Confidence 3465 555 899999999996555432 1 36899999998887666554
No 171
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=48.58 E-value=33 Score=35.61 Aligned_cols=49 Identities=12% Similarity=0.167 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHH--hcCCcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEe
Q 008645 173 HKLKLTFETALK--LRGGPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAV 232 (558)
Q Consensus 173 ~~Lk~lIE~~~~--~~g~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~l 232 (558)
.++...++-+.+ -.|+|++|+|||-|+-+++..|...+. +-.|.+.+.+
T Consensus 93 ~QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~-----------~~~vqKa~~L 143 (301)
T KOG3975|consen 93 DQVDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKL-----------VFSVQKAVLL 143 (301)
T ss_pred hHHHHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhccc-----------ccceEEEEEe
Confidence 445555443332 236799999999999999888775321 1256666666
No 172
>PF00300 His_Phos_1: Histidine phosphatase superfamily (branch 1); InterPro: IPR013078 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members. Phosphoglycerate mutase (5.4.2.1 from EC) (PGAM) and bisphosphoglycerate mutase (5.4.2.4 from EC) (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate [, , ]. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase 3.1.3.13 from EC activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein. BPGM is a dimeric protein and is found mainly in erythrocytes where it plays a major role in regulating haemoglobin oxygen affinity as a consequence of controlling 2,3-DPG concentration. The catalytic mechanism of both PGAM and BPGM involves the formation of a phosphohistidine intermediate []. A number of other proteins including, the bifunctional enzyme 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase [] that catalyses both the synthesis and the degradation of fructose-2,6-bisphosphate and bacterial alpha-ribazole-5'-phosphate phosphatase, which is involved in cobalamin biosynthesis, contain this domain [].; PDB: 1C80_A 1C7Z_B 1TIP_B 1C81_A 1FBT_A 1RII_B 3OI7_B 3LL4_A 3LG2_B 3F3K_B ....
Probab=47.79 E-value=25 Score=31.59 Aligned_cols=40 Identities=23% Similarity=0.432 Sum_probs=28.3
Q ss_pred cCCCCCCCchhhhhhHHHHHHHHHHHHHH--HhcCCcEEEEEeC
Q 008645 155 PYDWRLSPSKLEERDLYFHKLKLTFETAL--KLRGGPSLVLAHS 196 (558)
Q Consensus 155 pYDWRls~~~~e~~d~y~~~Lk~lIE~~~--~~~g~~VvLIaHS 196 (558)
++.++.+.. |...++..+++..++.+. ...++.|+||+|+
T Consensus 111 ~~~~~~~~~--Es~~~~~~R~~~~~~~l~~~~~~~~~vliVsHg 152 (158)
T PF00300_consen 111 PYFYRPPGG--ESWEDFQQRVKQFLDELIAYKRPGENVLIVSHG 152 (158)
T ss_dssp TSSCGSTTS--HHHHHHHHHHHHHHHHHHHHHHTTSEEEEEE-H
T ss_pred ccccccccC--CCHHHHHHHHHHHHHHHHHHhCCCCEEEEEecH
Confidence 445554433 356778899999999888 4556789999996
No 173
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=47.47 E-value=38 Score=39.08 Aligned_cols=78 Identities=8% Similarity=-0.056 Sum_probs=47.4
Q ss_pred chhhHHHHHHHHHHHcCCcc--ccce---eecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcC----CcEEEEEeCCCc
Q 008645 129 PLSSVWKEWVKWCIEFGIEA--NSII---AAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRG----GPSLVLAHSLGN 199 (558)
Q Consensus 129 ~~~~~y~~li~~L~~~GY~~--~~L~---gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g----~~VvLIaHSMGG 199 (558)
..+..|...++.|...||.. -|-+ |.+-+|+.+... +-...-++++.+.++ .+++.+ .++.|.|||+||
T Consensus 407 ~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~-~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGG 484 (620)
T COG1506 407 QVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRG-DWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGG 484 (620)
T ss_pred ccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhh-ccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHH
Confidence 33456888899999999942 2222 333345543221 011223556666666 444443 379999999999
Q ss_pred HHHHHHHHH
Q 008645 200 NVFRYFLEW 208 (558)
Q Consensus 200 lva~~fL~~ 208 (558)
.+++..+..
T Consensus 485 ymtl~~~~~ 493 (620)
T COG1506 485 YMTLLAATK 493 (620)
T ss_pred HHHHHHHhc
Confidence 999876654
No 174
>COG3741 HutG N-formylglutamate amidohydrolase [Amino acid transport and metabolism]
Probab=46.57 E-value=15 Score=38.06 Aligned_cols=37 Identities=24% Similarity=0.392 Sum_probs=31.0
Q ss_pred hHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcHHHHHH
Q 008645 169 DLYFHKLKLTFETALKLRGGPSLVLAHSLGNNVFRYF 205 (558)
Q Consensus 169 d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGlva~~f 205 (558)
+-|...|++.||.+.+..|.-|-+.||||=+.+-+-|
T Consensus 127 ~PYHaaL~~el~r~~a~~G~avLiDcHSm~s~ip~l~ 163 (272)
T COG3741 127 KPYHAALRRELERLRAIFGAAVLIDCHSMRSHIPRLF 163 (272)
T ss_pred ccHHHHHHHHHHHHHhhcCeEEEEecccccccccccc
Confidence 4477889999999999998877788999998887644
No 175
>KOG3101 consensus Esterase D [General function prediction only]
Probab=45.23 E-value=10 Score=38.47 Aligned_cols=36 Identities=17% Similarity=0.241 Sum_probs=23.0
Q ss_pred cEEEEEeCCCcHHHHH-HHHHhhccCCCccchhhhhhhhceEEEecCC
Q 008645 189 PSLVLAHSLGNNVFRY-FLEWLKLEIPPKQYIKWLDEHIHAYFAVGSP 235 (558)
Q Consensus 189 ~VvLIaHSMGGlva~~-fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P 235 (558)
++-|.||||||-=|+- +|+.. . |-|-|++|-.|.-|
T Consensus 142 k~~IfGHSMGGhGAl~~~Lkn~---------~--kykSvSAFAPI~NP 178 (283)
T KOG3101|consen 142 KVGIFGHSMGGHGALTIYLKNP---------S--KYKSVSAFAPICNP 178 (283)
T ss_pred hcceeccccCCCceEEEEEcCc---------c--cccceeccccccCc
Confidence 6789999999977642 12221 1 33457777777665
No 176
>COG0627 Predicted esterase [General function prediction only]
Probab=44.52 E-value=26 Score=37.26 Aligned_cols=35 Identities=20% Similarity=0.232 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHhcC--CcEEEEEeCCCcHHHHHHHH
Q 008645 173 HKLKLTFETALKLRG--GPSLVLAHSLGNNVFRYFLE 207 (558)
Q Consensus 173 ~~Lk~lIE~~~~~~g--~~VvLIaHSMGGlva~~fL~ 207 (558)
+.|-..+++....+. ....|+||||||.=|+.+-.
T Consensus 135 ~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~ 171 (316)
T COG0627 135 QELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLAL 171 (316)
T ss_pred hhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhh
Confidence 457777787766554 27889999999999977544
No 177
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=37.10 E-value=30 Score=37.55 Aligned_cols=33 Identities=21% Similarity=0.230 Sum_probs=22.4
Q ss_pred cEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCC
Q 008645 189 PSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPF 236 (558)
Q Consensus 189 ~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~ 236 (558)
+|.++|||+||-.+...+.. +..+++.|.+ -||
T Consensus 229 ~i~~~GHSFGGATa~~~l~~--------------d~r~~~~I~L-D~W 261 (379)
T PF03403_consen 229 RIGLAGHSFGGATALQALRQ--------------DTRFKAGILL-DPW 261 (379)
T ss_dssp EEEEEEETHHHHHHHHHHHH---------------TT--EEEEE-S--
T ss_pred heeeeecCchHHHHHHHHhh--------------ccCcceEEEe-CCc
Confidence 58899999999999866653 2467888888 444
No 178
>TIGR02017 hutG_amidohyd N-formylglutamate amidohydrolase. In some species, histidine is converted to via urocanate and then formimino-L-glutamate to glutamate in four steps, where the fourth step is conversion of N-formimino-L-glutamate to L-glutamate and formamide. In others, that pathway from formimino-L-glutamate may differ, with the next enzyme being formiminoglutamate hydrolase (HutF) yielding N-formyl-L-glutamate. This model represents the enzyme N-formylglutamate deformylase, also called N-formylglutamate amidohydrolase, which then produces glutamate.
Probab=35.25 E-value=42 Score=34.67 Aligned_cols=32 Identities=25% Similarity=0.206 Sum_probs=25.9
Q ss_pred hHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcH
Q 008645 169 DLYFHKLKLTFETALKLRGGPSLVLAHSLGNN 200 (558)
Q Consensus 169 d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGGl 200 (558)
.-|.+.|.++|+++.++.|..++|=+|||=..
T Consensus 121 ~PYH~al~~~L~~~~~~~g~~~liD~HSm~s~ 152 (263)
T TIGR02017 121 RPYHAALQAEIERLRAQHGYAVLYDAHSIRSV 152 (263)
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEEeccCCcc
Confidence 44778899999999888876677779999764
No 179
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=34.38 E-value=24 Score=35.31 Aligned_cols=16 Identities=19% Similarity=0.208 Sum_probs=13.8
Q ss_pred CCceEEEeCCcccccc
Q 008645 40 PKLSGIIIPGFASTQL 55 (558)
Q Consensus 40 ~k~PVILVPGi~GS~L 55 (558)
.+.|||+|||.+||--
T Consensus 3 ~g~pVlFIhG~~Gs~~ 18 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYK 18 (225)
T ss_pred CCCEEEEECcCCCCHh
Confidence 5789999999999854
No 180
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=32.77 E-value=30 Score=28.02 Aligned_cols=18 Identities=11% Similarity=0.158 Sum_probs=9.7
Q ss_pred CCCCCceEEEeCCccccc
Q 008645 37 GDYPKLSGIIIPGFASTQ 54 (558)
Q Consensus 37 ~~~~k~PVILVPGi~GS~ 54 (558)
....|+||+|..|+++|-
T Consensus 39 ~~~~k~pVll~HGL~~ss 56 (63)
T PF04083_consen 39 QNKKKPPVLLQHGLLQSS 56 (63)
T ss_dssp TTTT--EEEEE--TT--G
T ss_pred cCCCCCcEEEECCcccCh
Confidence 355799999999999886
No 181
>PF05013 FGase: N-formylglutamate amidohydrolase; InterPro: IPR007709 Formylglutamate amidohydrolase (FGase) catalyzes the terminal reaction in the five-step pathway for histidine utilization in Pseudomonas putida. By this action, N-formyl-L-glutamate (FG) is hydrolyzed to produce L-glutamate plus formate [].; PDB: 2ODF_G 2Q7S_A.
Probab=32.07 E-value=51 Score=32.83 Aligned_cols=31 Identities=23% Similarity=0.166 Sum_probs=23.9
Q ss_pred hHHHHHHHHHHHHHHHhcCCcEEEEEeCCCc
Q 008645 169 DLYFHKLKLTFETALKLRGGPSLVLAHSLGN 199 (558)
Q Consensus 169 d~y~~~Lk~lIE~~~~~~g~~VvLIaHSMGG 199 (558)
.-|.+.|+++|++..++.|.-++|=+|||-.
T Consensus 113 ~Pyh~~l~~~l~~~~~~~g~~illd~HS~~~ 143 (222)
T PF05013_consen 113 RPYHRALAALLERLRARFGKVILLDCHSMPP 143 (222)
T ss_dssp HHHHHHHHHHHHHHHHCCS-EEEEEEEEE-T
T ss_pred HHHHHHHHHHHHHHHHhcCceEEEEeccCCC
Confidence 4588999999999998877556677999863
No 182
>cd00286 Tubulin_FtsZ Tubulin/FtsZ: Family includes tubulin alpha-, beta-, gamma-, delta-, and epsilon-tubulins as well as FtsZ, all of which are involved in polymer formation. Tubulin is the major component of microtubules, but also exists as a heterodimer and as a curved oligomer. Microtubules exist in all eukaryotic cells and are responsible for many functions, including cellular transport, cell motility, and mitosis. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ can polymerize into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria, archaea, and chloroplasts.
Probab=32.03 E-value=1.3e+02 Score=31.58 Aligned_cols=37 Identities=22% Similarity=0.243 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHHhcCC-cEEEEEeCCCc----HHHHHHHHHhh
Q 008645 170 LYFHKLKLTFETALKLRGG-PSLVLAHSLGN----NVFRYFLEWLK 210 (558)
Q Consensus 170 ~y~~~Lk~lIE~~~~~~g~-~VvLIaHSMGG----lva~~fL~~~~ 210 (558)
...++|+..+| ..+. ..++|-||||| -++-++++.++
T Consensus 74 ~i~~~ir~~~E----~cD~~~gf~i~~slgGGTGsG~~~~i~e~l~ 115 (328)
T cd00286 74 EILDIIRKEAE----ECDSLQGFFITHSLGGGTGSGLGPVLAERLK 115 (328)
T ss_pred HHHHHHHHHHH----hCCCccceEEEeecCCCccccHHHHHHHHHH
Confidence 34445555555 4444 67999999987 45555666654
No 183
>PRK03482 phosphoglycerate mutase; Provisional
Probab=31.67 E-value=1.3e+02 Score=29.42 Aligned_cols=49 Identities=18% Similarity=0.319 Sum_probs=31.9
Q ss_pred cCCCCCCCchhhhhhHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCcHHHHHHHHH
Q 008645 155 PYDWRLSPSKLEERDLYFHKLKLTFETALKLR-GGPSLVLAHSLGNNVFRYFLEW 208 (558)
Q Consensus 155 pYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~-g~~VvLIaHSMGGlva~~fL~~ 208 (558)
+.+++.+.. |+..++..++...++++.+.. ++.|+||+|+ .+.+.++..
T Consensus 111 ~~~~~~p~g--Es~~~~~~Rv~~~l~~~~~~~~~~~vliVsHg---~~i~~l~~~ 160 (215)
T PRK03482 111 TVDGRIPEG--ESMQELSDRMHAALESCLELPQGSRPLLVSHG---IALGCLVST 160 (215)
T ss_pred CCccCCCCC--ccHHHHHHHHHHHHHHHHHhCCCCeEEEEeCc---HHHHHHHHH
Confidence 444554333 466778888998888876654 4479999994 444555543
No 184
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=31.37 E-value=55 Score=35.38 Aligned_cols=40 Identities=18% Similarity=0.138 Sum_probs=27.3
Q ss_pred hHHHHHHHHHHHHHHH-hcC---CcEEEEEeCCCcHHHHHHHHH
Q 008645 169 DLYFHKLKLTFETALK-LRG---GPSLVLAHSLGNNVFRYFLEW 208 (558)
Q Consensus 169 d~y~~~Lk~lIE~~~~-~~g---~~VvLIaHSMGGlva~~fL~~ 208 (558)
++..++=...|+.... ..| +.+++.|||+||.|+-..|+.
T Consensus 192 ~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~ 235 (365)
T PF05677_consen 192 KDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKK 235 (365)
T ss_pred HHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHh
Confidence 4455555556665543 234 358889999999998887775
No 185
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=29.42 E-value=38 Score=37.25 Aligned_cols=37 Identities=11% Similarity=0.076 Sum_probs=26.7
Q ss_pred cEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCC
Q 008645 189 PSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPF 236 (558)
Q Consensus 189 ~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~ 236 (558)
+|+|.|||.||..+.+.+..-. ....+++.|+++++.
T Consensus 177 ~v~~~G~SaG~~~~~~~~~~~~-----------~~~lf~~~i~~sg~~ 213 (493)
T cd00312 177 SVTIFGESAGGASVSLLLLSPD-----------SKGLFHRAISQSGSA 213 (493)
T ss_pred eEEEEeecHHHHHhhhHhhCcc-----------hhHHHHHHhhhcCCc
Confidence 7999999999999877665311 123677888887654
No 186
>PF02879 PGM_PMM_II: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; InterPro: IPR005845 The alpha-D-phosphohexomutase superfamily is composed of four related enzymes, each of which catalyses a phosphoryl transfer on their sugar substrates: phosphoglucomutase (PGM), phosphoglucomutase/phosphomannomutase (PGM/PMM), phosphoglucosamine mutase (PNGM), and phosphoacetylglucosamine mutase (PAGM) []. PGM (5.4.2.2 from EC) converts D-glucose 1-phosphate into D-glucose 6-phosphate, and participates in both the breakdown and synthesis of glucose []. PGM/PMM (5.4.2.2 from EC; 5.4.2.8 from EC) are primarily bacterial enzymes that use either glucose or mannose as substrate, participating in the biosynthesis of a variety of carbohydrates such as lipopolysaccharides and alginate [, ]. Both PNGM (5.4.2.3 from EC) and PAGM (5.4.2.10 from EC) are involved in the biosynthesis of UDP-N-acetylglucosamine [, ]. Despite differences in substrate specificity, these enzymes share a similar catalytic mechanism, converting 1-phospho-sugars to 6-phospho-sugars via a biphosphorylated 1,6-phospho-sugar. The active enzyme is phosphorylated at a conserved serine residue and binds one magnesium ion; residues around the active site serine are well conserved among family members. The reaction mechanism involves phosphoryl transfer from the phosphoserine to the substrate to create a biophosphorylated sugar, followed by a phosphoryl transfer from the substrate back to the enzyme []. The structures of PGM and PGM/PMM have been determined, and were found to be very similar in topology. These enzymes are both composed of four domains and a large central active site cleft, where each domain contains residues essential for catalysis and/or substrate recognition. Domain I contains the catalytic phosphoserine, domain II contains a metal-binding loop to coordinate the magnesium ion, domain III contains the sugar-binding loop that recognises the two different binding orientations of the 1- and 6-phospho-sugars, and domain IV contains a phosphate-binding site required for orienting the incoming phospho-sugar substrate. This entry represents domain II found in alpha-D-phosphohexomutase enzymes. This domain has a 3-layer alpha/beta/alpha topology.; GO: 0016868 intramolecular transferase activity, phosphotransferases, 0005975 carbohydrate metabolic process; PDB: 2F7L_A 3PDK_B 1KFQ_B 1KFI_A 1C47_A 1VKL_B 1LXT_A 1JDY_B 3PMG_A 1C4G_B ....
Probab=28.85 E-value=48 Score=28.58 Aligned_cols=41 Identities=24% Similarity=0.340 Sum_probs=30.3
Q ss_pred HHHHHHHHHHH--HHHHhcCCcEEE-EEeCCCcHHHHHHHHHhh
Q 008645 170 LYFHKLKLTFE--TALKLRGGPSLV-LAHSLGNNVFRYFLEWLK 210 (558)
Q Consensus 170 ~y~~~Lk~lIE--~~~~~~g~~VvL-IaHSMGGlva~~fL~~~~ 210 (558)
.|++.|.+.|. ...+..+-+|++ .+|..|+.++..+|+.++
T Consensus 2 ~Y~~~l~~~~~~~~~~~~~~~kivvD~~~G~~~~~~~~ll~~lg 45 (104)
T PF02879_consen 2 AYIESLLSFIDILEAIKKSGLKIVVDCMNGAGSDILPRLLERLG 45 (104)
T ss_dssp HHHHHHHHTSCHHHHHHHTTCEEEEE-TTSTTHHHHHHHHHHTT
T ss_pred hHHHHHhhhccchhhcccCCCEEEEECCCCHHHHHHHHHHHHcC
Confidence 58888888877 223344557776 699999999999998764
No 187
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=28.72 E-value=1.6e+02 Score=32.78 Aligned_cols=72 Identities=17% Similarity=0.188 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHcCCccccceeecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhcCC-cEEEEEeCCCcHHHHHHHHHh
Q 008645 133 VWKEWVKWCIEFGIEANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFETALKLRGG-PSLVLAHSLGNNVFRYFLEWL 209 (558)
Q Consensus 133 ~y~~li~~L~~~GY~~~~L~gapYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~g~-~VvLIaHSMGGlva~~fL~~~ 209 (558)
.=+++.++|.+.|+...-+-..-|=|-.-- . .+...+|.++|....++-|. +|+|||.|.|.=|.=...+.+
T Consensus 275 lDk~v~~~l~~~gvpVvGvdsLRYfW~~rt--P---e~~a~Dl~r~i~~y~~~w~~~~~~liGySfGADvlP~~~n~L 347 (456)
T COG3946 275 LDKEVAEALQKQGVPVVGVDSLRYFWSERT--P---EQIAADLSRLIRFYARRWGAKRVLLIGYSFGADVLPFAYNRL 347 (456)
T ss_pred hhHHHHHHHHHCCCceeeeehhhhhhccCC--H---HHHHHHHHHHHHHHHHhhCcceEEEEeecccchhhHHHHHhC
Confidence 446778899999994322223345564321 1 23677888888876665565 799999999998876555544
No 188
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=28.50 E-value=99 Score=34.11 Aligned_cols=32 Identities=19% Similarity=0.106 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHhcC-CcEEEEEeCCCcHHHHH
Q 008645 173 HKLKLTFETALKLRG-GPSLVLAHSLGNNVFRY 204 (558)
Q Consensus 173 ~~Lk~lIE~~~~~~g-~~VvLIaHSMGGlva~~ 204 (558)
..|+.++.......+ .||+++|||.||-++..
T Consensus 168 NAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l 200 (403)
T PF11144_consen 168 NALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHL 200 (403)
T ss_pred HHHHHHHHhhhcccCCCcEEEEecCcHHHHHHH
Confidence 445555555444333 39999999999998853
No 189
>PRK13462 acid phosphatase; Provisional
Probab=28.08 E-value=1.4e+02 Score=29.13 Aligned_cols=41 Identities=12% Similarity=0.051 Sum_probs=30.8
Q ss_pred hhhhhHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCcHHHHHHHHH
Q 008645 165 LEERDLYFHKLKLTFETALKLR-GGPSLVLAHSLGNNVFRYFLEW 208 (558)
Q Consensus 165 ~e~~d~y~~~Lk~lIE~~~~~~-g~~VvLIaHSMGGlva~~fL~~ 208 (558)
-|+..++..++...++++.+.. ++.|+||+|. .+.|.++..
T Consensus 116 gES~~~~~~Rv~~~l~~i~~~~~~~~vliVsHg---~vir~ll~~ 157 (203)
T PRK13462 116 GESVAQVNERADRAVALALEHMESRDVVFVSHG---HFSRAVITR 157 (203)
T ss_pred CccHHHHHHHHHHHHHHHHHhCCCCCEEEEeCC---HHHHHHHHH
Confidence 4677888899999999887654 4579999997 466666653
No 190
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=28.00 E-value=1e+02 Score=35.77 Aligned_cols=43 Identities=19% Similarity=0.245 Sum_probs=30.4
Q ss_pred CCcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCCCchh
Q 008645 187 GGPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGATQ 241 (558)
Q Consensus 187 g~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs~~ 241 (558)
..|++|+|.|||.+|+.+ +.. .--|..|+++|.||=|+.+.-.
T Consensus 249 ha~IiLvGrsmGAlVach----VSp--------snsdv~V~~vVCigypl~~vdg 291 (784)
T KOG3253|consen 249 HAPIILVGRSMGALVACH----VSP--------SNSDVEVDAVVCIGYPLDTVDG 291 (784)
T ss_pred CCceEEEecccCceeeEE----ecc--------ccCCceEEEEEEecccccCCCc
Confidence 348999999999888742 221 1113359999999999876554
No 191
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=27.40 E-value=1.6e+02 Score=35.24 Aligned_cols=82 Identities=10% Similarity=-0.056 Sum_probs=49.8
Q ss_pred HHHHHHHHcCCc--cccceeecCCCC--CCCchhhhhhHHHHHHHHHHHHHHHh-----------------cCCcEEEEE
Q 008645 136 EWVKWCIEFGIE--ANSIIAAPYDWR--LSPSKLEERDLYFHKLKLTFETALKL-----------------RGGPSLVLA 194 (558)
Q Consensus 136 ~li~~L~~~GY~--~~~L~gapYDWR--ls~~~~e~~d~y~~~Lk~lIE~~~~~-----------------~g~~VvLIa 194 (558)
.+.+.|.+.||. ..|.+|..-.=. ......| .++.+..||-+..+ .+++|-++|
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~~E-----~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G 344 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPTTGDYQE-----IESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTG 344 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCccCCHHH-----HHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEE
Confidence 366889999994 356666643211 1111111 34567777766532 135899999
Q ss_pred eCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCC
Q 008645 195 HSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSP 235 (558)
Q Consensus 195 HSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P 235 (558)
.||||.++....... ...++++|.+++.
T Consensus 345 ~SY~G~~~~~aAa~~-------------pp~LkAIVp~a~i 372 (767)
T PRK05371 345 KSYLGTLPNAVATTG-------------VEGLETIIPEAAI 372 (767)
T ss_pred EcHHHHHHHHHHhhC-------------CCcceEEEeeCCC
Confidence 999999986444321 1367888877544
No 192
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=26.49 E-value=99 Score=33.88 Aligned_cols=46 Identities=13% Similarity=0.133 Sum_probs=30.7
Q ss_pred HHHHHHhcCC---cEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCC
Q 008645 179 FETALKLRGG---PSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSP 235 (558)
Q Consensus 179 IE~~~~~~g~---~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P 235 (558)
|.+-.+..|+ +|+|.|||-||..+.+.|..-. .....++.|+.|++
T Consensus 196 V~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~-----------~~~LF~raI~~SGs 244 (535)
T PF00135_consen 196 VQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPS-----------SKGLFHRAILQSGS 244 (535)
T ss_dssp HHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGG-----------GTTSBSEEEEES--
T ss_pred HHhhhhhcccCCcceeeeeecccccccceeeeccc-----------cccccccccccccc
Confidence 3333344554 5999999999999887665411 13478999999884
No 193
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=26.44 E-value=58 Score=32.75 Aligned_cols=20 Identities=20% Similarity=0.165 Sum_probs=17.4
Q ss_pred CcEEEEEeCCCcHHHHHHHH
Q 008645 188 GPSLVLAHSLGNNVFRYFLE 207 (558)
Q Consensus 188 ~~VvLIaHSMGGlva~~fL~ 207 (558)
+.|.|||.|||--+|..+|+
T Consensus 57 ~~i~lvAWSmGVw~A~~~l~ 76 (213)
T PF04301_consen 57 REIYLVAWSMGVWAANRVLQ 76 (213)
T ss_pred ceEEEEEEeHHHHHHHHHhc
Confidence 47999999999999987775
No 194
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=26.03 E-value=99 Score=30.52 Aligned_cols=40 Identities=15% Similarity=0.237 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHhcCC-cEEEEEeCCCcHH----HHHHHHHhh
Q 008645 171 YFHKLKLTFETALKLRGG-PSLVLAHSLGNNV----FRYFLEWLK 210 (558)
Q Consensus 171 y~~~Lk~lIE~~~~~~g~-~VvLIaHSMGGlv----a~~fL~~~~ 210 (558)
..++....|.+..+.... ..++|.|||||-. +-++++.++
T Consensus 106 ~~~~~~~~ir~~~e~~d~~~~~~i~~slgGGTGSG~~~~l~~~l~ 150 (216)
T PF00091_consen 106 ALEEILEQIRKEIEKCDSLDGFFIVHSLGGGTGSGLGPVLAEMLR 150 (216)
T ss_dssp HHHHHHHHHHHHHHTSTTESEEEEEEESSSSHHHHHHHHHHHHHH
T ss_pred cccccccccchhhccccccccceecccccceeccccccccchhhh
Confidence 344555555555544444 7899999999763 444555544
No 195
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=25.79 E-value=1.8e+02 Score=31.74 Aligned_cols=56 Identities=18% Similarity=0.240 Sum_probs=36.3
Q ss_pred hHHHHHHHHHHHHHHHhc----CCcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCC
Q 008645 169 DLYFHKLKLTFETALKLR----GGPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFL 237 (558)
Q Consensus 169 d~y~~~Lk~lIE~~~~~~----g~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~ 237 (558)
++-..++..+|+.+.++. +.|+|++|=|.||.++-.|-... | .-|.+.|+-|+|..
T Consensus 90 ~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~ky-----P--------~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 90 EQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKY-----P--------HLFDGAWASSAPVQ 149 (434)
T ss_dssp HHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH------T--------TT-SEEEEET--CC
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhC-----C--------CeeEEEEeccceee
Confidence 445677888888776443 23899999999999997654432 2 25788888888863
No 196
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=25.26 E-value=89 Score=33.11 Aligned_cols=69 Identities=17% Similarity=0.116 Sum_probs=41.8
Q ss_pred HHHHHHHHcCC-ccccceeecCCC---CC-CCchhhhhhHHH----HHHHHHHHHHHHhc--CCcEEEEEeCCCcHHHHH
Q 008645 136 EWVKWCIEFGI-EANSIIAAPYDW---RL-SPSKLEERDLYF----HKLKLTFETALKLR--GGPSLVLAHSLGNNVFRY 204 (558)
Q Consensus 136 ~li~~L~~~GY-~~~~L~gapYDW---Rl-s~~~~e~~d~y~----~~Lk~lIE~~~~~~--g~~VvLIaHSMGGlva~~ 204 (558)
.+++.|...|= ....+++.+|== |. ... .+.+|. ..|--.||+.|... +.--+|.|-||||+++++
T Consensus 117 ~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~---~n~~~~~~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~ 193 (299)
T COG2382 117 RILDSLIAAGEIPPAILVGIDYIDVKKRREELH---CNEAYWRFLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLY 193 (299)
T ss_pred HHHHHHHHcCCCCCceEEecCCCCHHHHHHHhc---ccHHHHHHHHHHhhhhhhccCcccccCCCcEEeccccccHHHHH
Confidence 35677777775 556777887732 21 111 223333 34445666666433 234689999999999986
Q ss_pred HHH
Q 008645 205 FLE 207 (558)
Q Consensus 205 fL~ 207 (558)
-..
T Consensus 194 agl 196 (299)
T COG2382 194 AGL 196 (299)
T ss_pred HHh
Confidence 544
No 197
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=24.12 E-value=1.2e+02 Score=29.67 Aligned_cols=47 Identities=13% Similarity=-0.060 Sum_probs=24.6
Q ss_pred c-EEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCCCch
Q 008645 189 P-SLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGAT 240 (558)
Q Consensus 189 ~-VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs~ 240 (558)
| +-|+|.|.|+.+|..+|....... ...+ ..-++-.|.+++..-...
T Consensus 102 PfdGvlGFSQGA~lAa~ll~~~~~~~----~~~~-~~~~kf~V~~sg~~p~~~ 149 (212)
T PF03959_consen 102 PFDGVLGFSQGAALAALLLALQQRGR----PDGA-HPPFKFAVFISGFPPPDP 149 (212)
T ss_dssp --SEEEEETHHHHHHHHHHHHHHHHS----T--T-----SEEEEES----EEE
T ss_pred CeEEEEeecHHHHHHHHHHHHHHhhc----cccc-CCCceEEEEEcccCCCch
Confidence 6 569999999999988876543210 0001 123577888877665443
No 198
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=23.94 E-value=87 Score=34.36 Aligned_cols=32 Identities=28% Similarity=0.308 Sum_probs=20.4
Q ss_pred CcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEec
Q 008645 188 GPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVG 233 (558)
Q Consensus 188 ~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg 233 (558)
+++-++|+||||..+.. |.-+ |..|++.|..|
T Consensus 226 ~RIG~~GfSmGg~~a~~-LaAL-------------DdRIka~v~~~ 257 (390)
T PF12715_consen 226 DRIGCMGFSMGGYRAWW-LAAL-------------DDRIKATVANG 257 (390)
T ss_dssp EEEEEEEEGGGHHHHHH-HHHH--------------TT--EEEEES
T ss_pred cceEEEeecccHHHHHH-HHHc-------------chhhHhHhhhh
Confidence 36889999999999753 3322 34688887653
No 199
>TIGR03162 ribazole_cobC alpha-ribazole phosphatase. Members of this protein family include the known CobC protein of Salmonella and Eschichia coli species, and homologous proteins found in cobalamin biosynthesis regions in other bacteria. This protein is alpha-ribazole phosphatase (EC 3.1.3.73) and, like many phosphatases, can be closely related in sequence to other phosphatases with different functions. Close homologs excluded from this model include proteins with duplications, so this model is built in -g mode to suppress hits to those proteins.
Probab=23.57 E-value=95 Score=28.98 Aligned_cols=40 Identities=25% Similarity=0.429 Sum_probs=28.2
Q ss_pred hhhhHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCcHHHHHHHHH
Q 008645 166 EERDLYFHKLKLTFETALKLR-GGPSLVLAHSLGNNVFRYFLEW 208 (558)
Q Consensus 166 e~~d~y~~~Lk~lIE~~~~~~-g~~VvLIaHSMGGlva~~fL~~ 208 (558)
|...++..++.+.+++..+.. ++.|+||+|. .+.+.++..
T Consensus 115 Es~~~~~~R~~~~~~~l~~~~~~~~vlvVsHg---~~i~~l~~~ 155 (177)
T TIGR03162 115 ESFADFYQRVSEFLEELLKAHEGDNVLIVTHG---GVIRALLAH 155 (177)
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCeEEEEECH---HHHHHHHHH
Confidence 456778889999998887764 4579999996 334444443
No 200
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=23.00 E-value=1.3e+02 Score=31.65 Aligned_cols=50 Identities=22% Similarity=0.343 Sum_probs=33.0
Q ss_pred ecCCCCCCCchhhhhhHHHHHH----HHHHHHHHHhc------C-CcEEEEEeCCCcHHHH
Q 008645 154 APYDWRLSPSKLEERDLYFHKL----KLTFETALKLR------G-GPSLVLAHSLGNNVFR 203 (558)
Q Consensus 154 apYDWRls~~~~e~~d~y~~~L----k~lIE~~~~~~------g-~~VvLIaHSMGGlva~ 203 (558)
--|.-|..+.+...+-+|.++| +++|++..+.. | .|..|+|-||||.++.
T Consensus 150 pfYgqr~p~~q~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~ 210 (371)
T KOG1551|consen 150 PFYGQRVPEEQIIHMLEYVTDLFKMGRATIQEFVKLFTWSSADGLGNLNLVGRSMGGDIAN 210 (371)
T ss_pred ccccccCCHHHHHHHHHHHHHHHHhhHHHHHHHHHhcccccccCcccceeeeeecccHHHH
Confidence 3467777776643333344443 56778776432 3 3899999999999985
No 201
>PRK10115 protease 2; Provisional
Probab=22.67 E-value=54 Score=38.45 Aligned_cols=79 Identities=11% Similarity=0.066 Sum_probs=49.2
Q ss_pred chhhHHHHHHHHHHHcCCcc--cccee---ecCCCCCCCchhhhhhHHHHHHHHHHHHHHHhc---CCcEEEEEeCCCcH
Q 008645 129 PLSSVWKEWVKWCIEFGIEA--NSIIA---APYDWRLSPSKLEERDLYFHKLKLTFETALKLR---GGPSLVLAHSLGNN 200 (558)
Q Consensus 129 ~~~~~y~~li~~L~~~GY~~--~~L~g---apYDWRls~~~~e~~d~y~~~Lk~lIE~~~~~~---g~~VvLIaHSMGGl 200 (558)
++...|......|.+.||.- -+++| ++-+|+.+-... ....-++++...+|.+.++. ..++.+.|-|.||+
T Consensus 458 ~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~-~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~ 536 (686)
T PRK10115 458 SIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFL-KKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGM 536 (686)
T ss_pred CCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhh-cCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHH
Confidence 44445777778899999942 34544 344666532211 11123556666666655433 23799999999999
Q ss_pred HHHHHHHH
Q 008645 201 VFRYFLEW 208 (558)
Q Consensus 201 va~~fL~~ 208 (558)
++...+..
T Consensus 537 l~~~~~~~ 544 (686)
T PRK10115 537 LMGVAINQ 544 (686)
T ss_pred HHHHHHhc
Confidence 99887764
No 202
>smart00855 PGAM Phosphoglycerate mutase family. Phosphoglycerate mutase (PGAM) and bisphosphoglycerate mutase (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate PUBMED:2847721, PUBMED:2831102, PUBMED:10958932. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein.
Probab=21.46 E-value=1.6e+02 Score=26.90 Aligned_cols=32 Identities=19% Similarity=0.221 Sum_probs=22.8
Q ss_pred hhhhHHHHHHHHHHHHHHHh---cCCcEEEEEeCC
Q 008645 166 EERDLYFHKLKLTFETALKL---RGGPSLVLAHSL 197 (558)
Q Consensus 166 e~~d~y~~~Lk~lIE~~~~~---~g~~VvLIaHSM 197 (558)
|...++..++...++.+.+. .++.|++|+|..
T Consensus 116 Es~~~~~~Rv~~~~~~i~~~~~~~~~~vlvVtHg~ 150 (155)
T smart00855 116 ESLADVVERLVRALEELIATHDKSGQNVLIVSHGG 150 (155)
T ss_pred CCHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCc
Confidence 45567788888888777654 345789999964
No 203
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=20.94 E-value=1.5e+02 Score=31.40 Aligned_cols=57 Identities=19% Similarity=0.068 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHhc---CCcEEEEEeCCCcHHHHHHHHHhhccCCCccchhhhhhhhceEEEecCCCCCchhhhh
Q 008645 173 HKLKLTFETALKLR---GGPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGATQSVK 244 (558)
Q Consensus 173 ~~Lk~lIE~~~~~~---g~~VvLIaHSMGGlva~~fL~~~~~~~~~~~~~~Wkdk~I~~~I~lg~P~~Gs~~al~ 244 (558)
.+....|+-+...- ++++.+.|+|+||.++...... ++.|++.+.. -|+++-.+..-
T Consensus 157 ~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaL--------------d~rv~~~~~~-vP~l~d~~~~~ 216 (320)
T PF05448_consen 157 LDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAAL--------------DPRVKAAAAD-VPFLCDFRRAL 216 (320)
T ss_dssp HHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHH--------------SST-SEEEEE-SESSSSHHHHH
T ss_pred HHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHh--------------CccccEEEec-CCCccchhhhh
Confidence 44455555554432 3478999999999999876553 2358888866 56666555433
No 204
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=20.86 E-value=91 Score=31.53 Aligned_cols=78 Identities=14% Similarity=-0.073 Sum_probs=47.4
Q ss_pred HHHHcCCc--cccceeecCC---CCCCCchhhhhhHHHHHHHHHHHHHHHhc--CCcEEEEEeCCCcHHHHHHHHHhhcc
Q 008645 140 WCIEFGIE--ANSIIAAPYD---WRLSPSKLEERDLYFHKLKLTFETALKLR--GGPSLVLAHSLGNNVFRYFLEWLKLE 212 (558)
Q Consensus 140 ~L~~~GY~--~~~L~gapYD---WRls~~~~e~~d~y~~~Lk~lIE~~~~~~--g~~VvLIaHSMGGlva~~fL~~~~~~ 212 (558)
.|.+.||. ..|++|..-. |+.. ...| .++....||-+.++- +.+|-++|.|.+|.........
T Consensus 52 ~~~~~GY~vV~~D~RG~g~S~G~~~~~-~~~e-----~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~---- 121 (272)
T PF02129_consen 52 PFAERGYAVVVQDVRGTGGSEGEFDPM-SPNE-----AQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAAR---- 121 (272)
T ss_dssp HHHHTT-EEEEEE-TTSTTS-S-B-TT-SHHH-----HHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTT----
T ss_pred HHHhCCCEEEEECCcccccCCCccccC-ChhH-----HHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhc----
Confidence 38899994 3677777553 3321 2122 345566777665543 3489999999999998655431
Q ss_pred CCCccchhhhhhhhceEEEecCCC
Q 008645 213 IPPKQYIKWLDEHIHAYFAVGSPF 236 (558)
Q Consensus 213 ~~~~~~~~Wkdk~I~~~I~lg~P~ 236 (558)
...+++++|..+++.
T Consensus 122 ---------~~p~LkAi~p~~~~~ 136 (272)
T PF02129_consen 122 ---------RPPHLKAIVPQSGWS 136 (272)
T ss_dssp ---------T-TTEEEEEEESE-S
T ss_pred ---------CCCCceEEEecccCC
Confidence 124789999886654
Done!