BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008647
(558 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3QFR|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase
(R457h Mutant)
pdb|3QFR|B Chain B, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase
(R457h Mutant)
Length = 618
Score = 408 bits (1049), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/553 (39%), Positives = 311/553 (56%), Gaps = 23/553 (4%)
Query: 13 YGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQG 72
YG+G+PTDNA FY W E + L +KF VFGLGN+ YEHFN +G +D+ L + G
Sbjct: 81 YGEGDPTDNAQDFYDWLQETDVD---LSGVKFAVFGLGNKTYEHFNAMGKYVDKRLEQLG 137
Query: 73 GARLVPLGLGDDDQCIEDDFTAWRELVWPELDQLLRDEDDANTVSTPYTAAIPEYRVMIH 132
R+ LGLGDDD +E+DF WRE WP + + E +T ++I +Y +++H
Sbjct: 138 AQRIFELGLGDDDGNLEEDFITWREQFWPAVCEHFGVE------ATGEESSIRQYELVVH 191
Query: 133 GPTVTSSV-----DNYSNMPNGNASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSG 187
+ V + N FD +P V R+L++ ++R +HLE D+S
Sbjct: 192 TDIDAAKVYMGEMGRLKSYENQKPPFDAKNPFLAAVTTNRKLNQ-GTERHLMHLELDISD 250
Query: 188 TGITYETGDHVGVYVENCDETVEEAGKXXXXXXXXXXXXHTDNEDGTPRGSSLTPPFPGP 247
+ I YE+GDHV VY N V + GK + +E+ S+ PFP P
Sbjct: 251 SKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEE-----SNKKHPFPCP 305
Query: 248 CTLRTALARYADILNPPRKXXXXXXXXXXTEPSEAERLKFL--SSPQGKDDYSQWVVASQ 305
+ RTAL Y DI NPPR +EPSE E L+ + SS +GK+ Y WVV ++
Sbjct: 306 TSYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEAR 365
Query: 306 RSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPTPTG 365
R +L ++ + PS PPI + P LQ YYSI+SS + P+ VH+ +V T G
Sbjct: 366 RHILAILQDCPSLRPPID-HLCELLPRLQAHYYSIASSSKVHPNSVHICAVVVEYETKAG 424
Query: 366 RIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGF 425
RI+KGV + W++ P NG + P+F+R S F+LP + P+IMVGPGTG+APF GF
Sbjct: 425 RINKGVATNWLRAKEPAGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFIGF 484
Query: 426 LQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVISELILAFSREGSQKE 485
+QER L+Q G ++G LL++GCR D++Y +EL F +G +++L +AFSRE S K
Sbjct: 485 IQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRDGALTQLNVAFSREQSHKV 544
Query: 486 YVQHKMMDKAAQLWSLLSKEGYLYVCGDAKGMARDVHRTLHTIVQEQENVDSSKAESIVK 545
YVQH + LW L+ ++YVCGDA+ MARDV T + IV E ++ ++A +K
Sbjct: 545 YVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDYIK 604
Query: 546 KFQMEGRYLRDVW 558
K +GRY DVW
Sbjct: 605 KLMTKGRYSLDVW 617
>pdb|3QE2|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase
pdb|3QE2|B Chain B, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase
Length = 618
Score = 408 bits (1049), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/553 (39%), Positives = 312/553 (56%), Gaps = 23/553 (4%)
Query: 13 YGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQG 72
YG+G+PTDNA FY W E + L +KF VFGLGN+ YEHFN +G +D+ L + G
Sbjct: 81 YGEGDPTDNAQDFYDWLQETDVD---LSGVKFAVFGLGNKTYEHFNAMGKYVDKRLEQLG 137
Query: 73 GARLVPLGLGDDDQCIEDDFTAWRELVWPELDQLLRDEDDANTVSTPYTAAIPEYRVMIH 132
R+ LGLGDDD +E+DF WRE W + + E +T ++I +Y +++H
Sbjct: 138 AQRIFELGLGDDDGNLEEDFITWREQFWLAVCEHFGVE------ATGEESSIRQYELVVH 191
Query: 133 GPTVTSSV-----DNYSNMPNGNASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSG 187
+ V + N FD +P V R+L++ ++R +HLE D+S
Sbjct: 192 TDIDAAKVYMGEMGRLKSYENQKPPFDAKNPFLAAVTTNRKLNQ-GTERHLMHLELDISD 250
Query: 188 TGITYETGDHVGVYVENCDETVEEAGKXXXXXXXXXXXXHTDNEDGTPRGSSLTPPFPGP 247
+ I YE+GDHV VY N V + GK + +E+ S+ PFP P
Sbjct: 251 SKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEE-----SNKKHPFPCP 305
Query: 248 CTLRTALARYADILNPPRKXXXXXXXXXXTEPSEAERLKFL--SSPQGKDDYSQWVVASQ 305
+ RTAL Y DI NPPR +EPSE E L+ + SS +GK+ Y WVV ++
Sbjct: 306 TSYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEAR 365
Query: 306 RSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPTPTG 365
R +L ++ + PS PPI + P LQ RYYSI+SS + P+ VH+ +V T G
Sbjct: 366 RHILAILQDCPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETKAG 424
Query: 366 RIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGF 425
RI+KGV + W++ P+ NG + P+F+R S F+LP + P+IMVGPGTG+APF GF
Sbjct: 425 RINKGVATNWLRAKEPVGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFIGF 484
Query: 426 LQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVISELILAFSREGSQKE 485
+QER L+Q G ++G LL++GCR D++Y +EL F +G +++L +AFSRE S K
Sbjct: 485 IQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRDGALTQLNVAFSREQSHKV 544
Query: 486 YVQHKMMDKAAQLWSLLSKEGYLYVCGDAKGMARDVHRTLHTIVQEQENVDSSKAESIVK 545
YVQH + LW L+ ++YVCGDA+ MARDV T + IV E ++ ++A +K
Sbjct: 545 YVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDYIK 604
Query: 546 KFQMEGRYLRDVW 558
K +GRY DVW
Sbjct: 605 KLMTKGRYSLDVW 617
>pdb|1AMO|A Chain A, Three-Dimensional Structure Of Nadph-Cytochrome P450
Reductase: Prototype For Fmn-And Fad-Containing Enzymes
pdb|1AMO|B Chain B, Three-Dimensional Structure Of Nadph-Cytochrome P450
Reductase: Prototype For Fmn-And Fad-Containing Enzymes
Length = 615
Score = 408 bits (1049), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/563 (38%), Positives = 318/563 (56%), Gaps = 24/563 (4%)
Query: 4 SIYLRLTCRYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIV 63
S+ + YG+G+PTDNA FY W E + L +KF VFGLGN+ YEHFN +G
Sbjct: 68 SLVVFCMATYGEGDPTDNAQDFYDWLQETDVD---LTGVKFAVFGLGNKTYEHFNAMGKY 124
Query: 64 LDEELCKQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELDQLLRDEDDANTVSTPYTAA 123
+D+ L + G R+ LGLGDDD +E+DF WRE WP + + E +T ++
Sbjct: 125 VDQRLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEFFGVE------ATGEESS 178
Query: 124 IPEYRVMIH-----GPTVTSSVDNYSNMPNGNASFDIHHPCRVNVAVRRELHKPDSDRSC 178
I +Y +++H T + + N FD +P V R+L++ ++R
Sbjct: 179 IRQYELVVHEDMDVAKVYTGEMGRLKSYENQKPPFDAKNPFLAAVTANRKLNQ-GTERHL 237
Query: 179 IHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKXXXXXXXXXXXXHTDNEDGTPRGS 238
+HLE D+S + I YE+GDHV VY N V + G+ + +E+ S
Sbjct: 238 MHLELDISDSKIRYESGDHVAVYPANDSALVNQIGEILGADLDVIMSLNNLDEE-----S 292
Query: 239 SLTPPFPGPCTLRTALARYADILNPPRKXXXXXXXXXXTEPSEAERLKFL--SSPQGKDD 296
+ PFP P T RTAL Y DI NPPR +EPSE E L + SS +GK+
Sbjct: 293 NKKHPFPCPTTYRTALTYYLDITNPPRTNVLYELAQYASEPSEQEHLHKMASSSGEGKEL 352
Query: 297 YSQWVVASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCA 356
Y WVV ++R +L ++ ++PS PPI + P LQ RYYSI+SS + P+ VH+
Sbjct: 353 YLSWVVEARRHILAILQDYPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHICAV 411
Query: 357 LVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPG 416
V +GR++KGV ++W++ P NG + P+F+R S F+LP + P+IMVGPG
Sbjct: 412 AVEYEAKSGRVNKGVATSWLRAKEPAGENGGRALVPMFVRKSQFRLPFKSTTPVIMVGPG 471
Query: 417 TGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVISELILA 476
TG+APF GF+QER L++ G ++G LL++GCR D++Y +EL F ++G +++L +A
Sbjct: 472 TGIAPFMGFIQERAWLREQGKEVGETLLYYGCRRSDEDYLYREELARFHKDGALTQLNVA 531
Query: 477 FSREGSQKEYVQHKMMDKAAQLWSLLSKEG-YLYVCGDAKGMARDVHRTLHTIVQEQENV 535
FSRE + K YVQH + LW L+ + G ++YVCGDA+ MA+DV T + IV E +
Sbjct: 532 FSREQAHKVYVQHLLKRDREHLWKLIHEGGAHIYVCGDARNMAKDVQNTFYDIVAEFGPM 591
Query: 536 DSSKAESIVKKFQMEGRYLRDVW 558
+ ++A VKK +GRY DVW
Sbjct: 592 EHTQAVDYVKKLMTKGRYSLDVW 614
>pdb|3ES9|A Chain A, Nadph-Cytochrome P450 Reductase In An Open Conformation
pdb|3ES9|B Chain B, Nadph-Cytochrome P450 Reductase In An Open Conformation
pdb|3ES9|C Chain C, Nadph-Cytochrome P450 Reductase In An Open Conformation
Length = 618
Score = 406 bits (1043), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/563 (38%), Positives = 316/563 (56%), Gaps = 28/563 (4%)
Query: 4 SIYLRLTCRYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIV 63
S+ + YG+G+PTDNA FY W E + L +KF VFGLGN+ YEHFN +G
Sbjct: 75 SLVVFCMATYGEGDPTDNAQDFYDWLQETDVD---LTGVKFAVFGLGNKTYEHFNAMGKY 131
Query: 64 LDEELCKQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELDQLLRDEDDANTVSTPYTAA 123
+D+ L + G R+ LGLGDDD +E+DF WRE WP + + E ++
Sbjct: 132 VDQRLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEFFGVE----------ASS 181
Query: 124 IPEYRVMIH-----GPTVTSSVDNYSNMPNGNASFDIHHPCRVNVAVRRELHKPDSDRSC 178
I +Y +++H T + + N FD +P V R+L++ ++R
Sbjct: 182 IRQYELVVHEDMDVAKVYTGEMGRLKSYENQKPPFDAKNPFLAAVTANRKLNQ-GTERHL 240
Query: 179 IHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKXXXXXXXXXXXXHTDNEDGTPRGS 238
+HLE D+S + I YE+GDHV VY N V + G+ + +E+ S
Sbjct: 241 MHLELDISDSKIRYESGDHVAVYPANDSALVNQIGEILGADLDVIMSLNNLDEE-----S 295
Query: 239 SLTPPFPGPCTLRTALARYADILNPPRKXXXXXXXXXXTEPSEAERLKFL--SSPQGKDD 296
+ PFP P T RTAL Y DI NPPR +EPSE E L + SS +GK+
Sbjct: 296 NKKHPFPCPTTYRTALTYYLDITNPPRTNVLYELAQYASEPSEQEHLHKMASSSGEGKEL 355
Query: 297 YSQWVVASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCA 356
Y WVV ++R +L ++ ++PS PPI + P LQ RYYSI+SS + P+ VH+
Sbjct: 356 YLSWVVEARRHILAILQDYPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHICAV 414
Query: 357 LVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPG 416
V +GR++KGV ++W++ P NG + P+F+R S F+LP + P+IMVGPG
Sbjct: 415 AVEYEAKSGRVNKGVATSWLRAKEPAGENGGRALVPMFVRKSQFRLPFKSTTPVIMVGPG 474
Query: 417 TGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVISELILA 476
TG+APF GF+QER L++ G ++G LL++GCR D++Y +EL F ++G +++L +A
Sbjct: 475 TGIAPFMGFIQERAWLREQGKEVGETLLYYGCRRSDEDYLYREELARFHKDGALTQLNVA 534
Query: 477 FSREGSQKEYVQHKMMDKAAQLWSLLSKEG-YLYVCGDAKGMARDVHRTLHTIVQEQENV 535
FSRE + K YVQH + LW L+ + G ++YVCGDA+ MA+DV T + IV E +
Sbjct: 535 FSREQAHKVYVQHLLKRDREHLWKLIHEGGAHIYVCGDARNMAKDVQNTFYDIVAEFGPM 594
Query: 536 DSSKAESIVKKFQMEGRYLRDVW 558
+ ++A VKK +GRY DVW
Sbjct: 595 EHTQAVDYVKKLMTKGRYSLDVW 617
>pdb|3QFC|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 (V492e
Mutant)
pdb|3QFC|B Chain B, Crystal Structure Of Human Nadph-Cytochrome P450 (V492e
Mutant)
Length = 618
Score = 405 bits (1042), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/553 (39%), Positives = 311/553 (56%), Gaps = 23/553 (4%)
Query: 13 YGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQG 72
YG+G+PTDNA FY W E + L +KF VFGLGN+ YEHFN +G +D+ L + G
Sbjct: 81 YGEGDPTDNAQDFYDWLQETDVD---LSGVKFAVFGLGNKTYEHFNAMGKYVDKRLEQLG 137
Query: 73 GARLVPLGLGDDDQCIEDDFTAWRELVWPELDQLLRDEDDANTVSTPYTAAIPEYRVMIH 132
R+ LGLGDDD +E+DF WRE W + + E +T ++I +Y +++H
Sbjct: 138 AQRIFELGLGDDDGNLEEDFITWREQFWLAVCEHFGVE------ATGEESSIRQYELVVH 191
Query: 133 GPTVTSSV-----DNYSNMPNGNASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSG 187
+ V + N FD +P V R+L++ ++R +HLE D+S
Sbjct: 192 TDIDAAKVYMGEMGRLKSYENQKPPFDAKNPFLAAVTTNRKLNQ-GTERHLMHLELDISD 250
Query: 188 TGITYETGDHVGVYVENCDETVEEAGKXXXXXXXXXXXXHTDNEDGTPRGSSLTPPFPGP 247
+ I YE+GDHV VY N V + GK + +E+ S+ PFP P
Sbjct: 251 SKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEE-----SNKKHPFPCP 305
Query: 248 CTLRTALARYADILNPPRKXXXXXXXXXXTEPSEAERLKFL--SSPQGKDDYSQWVVASQ 305
+ RTAL Y DI NPPR +EPSE E L+ + SS +GK+ Y WVV ++
Sbjct: 306 TSYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEAR 365
Query: 306 RSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPTPTG 365
R +L ++ + PS PPI + P LQ RYYSI+SS + P+ VH+ +V T G
Sbjct: 366 RHILAILQDCPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETKAG 424
Query: 366 RIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGF 425
RI+KG + W++ P+ NG + P+F+R S F+LP + P+IMVGPGTG+APF GF
Sbjct: 425 RINKGEATNWLRAKEPVGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFIGF 484
Query: 426 LQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVISELILAFSREGSQKE 485
+QER L+Q G ++G LL++GCR D++Y +EL F +G +++L +AFSRE S K
Sbjct: 485 IQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRDGALTQLNVAFSREQSHKV 544
Query: 486 YVQHKMMDKAAQLWSLLSKEGYLYVCGDAKGMARDVHRTLHTIVQEQENVDSSKAESIVK 545
YVQH + LW L+ ++YVCGDA+ MARDV T + IV E ++ ++A +K
Sbjct: 545 YVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDYIK 604
Query: 546 KFQMEGRYLRDVW 558
K +GRY DVW
Sbjct: 605 KLMTKGRYSLDVW 617
>pdb|1J9Z|A Chain A, Cypor-W677g
pdb|1J9Z|B Chain B, Cypor-W677g
Length = 622
Score = 404 bits (1038), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/562 (38%), Positives = 317/562 (56%), Gaps = 24/562 (4%)
Query: 4 SIYLRLTCRYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIV 63
S+ + YG+G+PTDNA FY W E + L +KF VFGLGN+ YEHFN +G
Sbjct: 75 SLVVFCMATYGEGDPTDNAQDFYDWLQETDVD---LTGVKFAVFGLGNKTYEHFNAMGKY 131
Query: 64 LDEELCKQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELDQLLRDEDDANTVSTPYTAA 123
+D+ L + G R+ LGLGDDD +E+DF WRE WP + + E +T ++
Sbjct: 132 VDQRLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEFFGVE------ATGEESS 185
Query: 124 IPEYRVMIH-----GPTVTSSVDNYSNMPNGNASFDIHHPCRVNVAVRRELHKPDSDRSC 178
I +Y +++H T + + N FD +P V R+L++ ++R
Sbjct: 186 IRQYELVVHEDMDVAKVYTGEMGRLKSYENQKPPFDAKNPFLAAVTANRKLNQ-GTERHL 244
Query: 179 IHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKXXXXXXXXXXXXHTDNEDGTPRGS 238
+HLE D+S + I YE+GDHV VY N V + G+ + +E+ S
Sbjct: 245 MHLELDISDSKIRYESGDHVAVYPANDSALVNQIGEILGADLDVIMSLNNLDEE-----S 299
Query: 239 SLTPPFPGPCTLRTALARYADILNPPRKXXXXXXXXXXTEPSEAERLKFL--SSPQGKDD 296
+ PFP P T RTAL Y DI NPPR +EPSE E L + SS +GK+
Sbjct: 300 NKKHPFPCPTTYRTALTYYLDITNPPRTNVLYELAQYASEPSEQEHLHKMASSSGEGKEL 359
Query: 297 YSQWVVASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCA 356
Y WVV ++R +L ++ ++PS PPI + P LQ RYYSI+SS + P+ VH+
Sbjct: 360 YLSWVVEARRHILAILQDYPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHICAV 418
Query: 357 LVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPG 416
V +GR++KGV ++W++ P NG + P+F+R S F+LP + P+IMVGPG
Sbjct: 419 AVEYEAKSGRVNKGVATSWLRAKEPAGENGGRALVPMFVRKSQFRLPFKSTTPVIMVGPG 478
Query: 417 TGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVISELILA 476
TG+APF GF+QER L++ G ++G LL++GCR D++Y +EL F ++G +++L +A
Sbjct: 479 TGIAPFMGFIQERAWLREQGKEVGETLLYYGCRRSDEDYLYREELARFHKDGALTQLNVA 538
Query: 477 FSREGSQKEYVQHKMMDKAAQLWSLLSKEG-YLYVCGDAKGMARDVHRTLHTIVQEQENV 535
FSRE + K YVQH + LW L+ + G ++YVCGDA+ MA+DV T + IV E +
Sbjct: 539 FSREQAHKVYVQHLLKRDREHLWKLIHEGGAHIYVCGDARNMAKDVQNTFYDIVAEFGPM 598
Query: 536 DSSKAESIVKKFQMEGRYLRDV 557
+ ++A VKK +GRY DV
Sbjct: 599 EHTQAVDYVKKLMTKGRYSLDV 620
>pdb|1JA0|A Chain A, Cypor-W677x
pdb|1JA0|B Chain B, Cypor-W677x
Length = 620
Score = 404 bits (1037), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/562 (38%), Positives = 317/562 (56%), Gaps = 24/562 (4%)
Query: 4 SIYLRLTCRYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIV 63
S+ + YG+G+PTDNA FY W E + L +KF VFGLGN+ YEHFN +G
Sbjct: 75 SLVVFCMATYGEGDPTDNAQDFYDWLQETDVD---LTGVKFAVFGLGNKTYEHFNAMGKY 131
Query: 64 LDEELCKQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELDQLLRDEDDANTVSTPYTAA 123
+D+ L + G R+ LGLGDDD +E+DF WRE WP + + E +T ++
Sbjct: 132 VDQRLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEFFGVE------ATGEESS 185
Query: 124 IPEYRVMIH-----GPTVTSSVDNYSNMPNGNASFDIHHPCRVNVAVRRELHKPDSDRSC 178
I +Y +++H T + + N FD +P V R+L++ ++R
Sbjct: 186 IRQYELVVHEDMDVAKVYTGEMGRLKSYENQKPPFDAKNPFLAAVTANRKLNQ-GTERHL 244
Query: 179 IHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKXXXXXXXXXXXXHTDNEDGTPRGS 238
+HLE D+S + I YE+GDHV VY N V + G+ + +E+ S
Sbjct: 245 MHLELDISDSKIRYESGDHVAVYPANDSALVNQIGEILGADLDVIMSLNNLDEE-----S 299
Query: 239 SLTPPFPGPCTLRTALARYADILNPPRKXXXXXXXXXXTEPSEAERLKFL--SSPQGKDD 296
+ PFP P T RTAL Y DI NPPR +EPSE E L + SS +GK+
Sbjct: 300 NKKHPFPCPTTYRTALTYYLDITNPPRTNVLYELAQYASEPSEQEHLHKMASSSGEGKEL 359
Query: 297 YSQWVVASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCA 356
Y WVV ++R +L ++ ++PS PPI + P LQ RYYSI+SS + P+ VH+
Sbjct: 360 YLSWVVEARRHILAILQDYPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHICAV 418
Query: 357 LVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPG 416
V +GR++KGV ++W++ P NG + P+F+R S F+LP + P+IMVGPG
Sbjct: 419 AVEYEAKSGRVNKGVATSWLRAKEPAGENGGRALVPMFVRKSQFRLPFKSTTPVIMVGPG 478
Query: 417 TGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVISELILA 476
TG+APF GF+QER L++ G ++G LL++GCR D++Y +EL F ++G +++L +A
Sbjct: 479 TGIAPFMGFIQERAWLREQGKEVGETLLYYGCRRSDEDYLYREELARFHKDGALTQLNVA 538
Query: 477 FSREGSQKEYVQHKMMDKAAQLWSLLSKEG-YLYVCGDAKGMARDVHRTLHTIVQEQENV 535
FSRE + K YVQH + LW L+ + G ++YVCGDA+ MA+DV T + IV E +
Sbjct: 539 FSREQAHKVYVQHLLKRDREHLWKLIHEGGAHIYVCGDARNMAKDVQNTFYDIVAEFGPM 598
Query: 536 DSSKAESIVKKFQMEGRYLRDV 557
+ ++A VKK +GRY DV
Sbjct: 599 EHTQAVDYVKKLMTKGRYSLDV 620
>pdb|1JA1|A Chain A, Cypor-Triple Mutant
pdb|1JA1|B Chain B, Cypor-Triple Mutant
Length = 622
Score = 402 bits (1033), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/563 (38%), Positives = 317/563 (56%), Gaps = 24/563 (4%)
Query: 4 SIYLRLTCRYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIV 63
S+ + YG+G+PTDNA FY W E + L +KF VFGLGN+ YEHFN +G
Sbjct: 75 SLVVFCMATYGEGDPTDNAQDFYDWLQETDVD---LTGVKFAVFGLGNKTYEHFNAMGKY 131
Query: 64 LDEELCKQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELDQLLRDEDDANTVSTPYTAA 123
+D+ L + G R+ LGLGDDD +E+DF WRE WP + + E +T ++
Sbjct: 132 VDQRLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEFFGVE------ATGEESS 185
Query: 124 IPEYRVMIH-----GPTVTSSVDNYSNMPNGNASFDIHHPCRVNVAVRRELHKPDSDRSC 178
I +Y +++H T + + N FD +P V R+L++ ++R
Sbjct: 186 IRQYELVVHEDMDVAKVYTGEMGRLKSYENQKPPFDAKNPFLAAVTANRKLNQ-GTERHL 244
Query: 179 IHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKXXXXXXXXXXXXHTDNEDGTPRGS 238
+HLE D+S + I YE+GDHV VY N V + G+ + +E+ S
Sbjct: 245 MHLELDISDSKIRYESGDHVAVYPANDSALVNQIGEILGADLDVIMSLNNLDEE-----S 299
Query: 239 SLTPPFPGPCTLRTALARYADILNPPRKXXXXXXXXXXTEPSEAERLKFL--SSPQGKDD 296
+ PFP P T RTAL Y DI NPPR +EPSE E L + SS +GK+
Sbjct: 300 NKKHPFPCPTTYRTALTYYLDITNPPRTNVLYELAQYASEPSEQEHLHKMASSSGEGKEL 359
Query: 297 YSQWVVASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCA 356
Y WVV ++R +L ++ ++PS PPI + P LQ RYY+I+SS + P+ VH+
Sbjct: 360 YLSWVVEARRHILAILQDYPSLRPPID-HLCELLPRLQARYYAIASSSKVHPNSVHICAV 418
Query: 357 LVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPG 416
V +GR++KGV ++W++ P NG + P+F+R S F+LP + P+IMVGPG
Sbjct: 419 AVEYEAKSGRVNKGVATSWLRAKEPAGENGGRALVPMFVRKSQFRLPFKSTTPVIMVGPG 478
Query: 417 TGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVISELILA 476
TG+APF GF+QER L++ G ++G LL++GCR D++Y +EL F ++G +++L +A
Sbjct: 479 TGIAPFMGFIQERAWLREQGKEVGETLLYYGCRRSDEDYLYREELARFHKDGALTQLNVA 538
Query: 477 FSREGSQKEYVQHKMMDKAAQLWSLLSKEG-YLYVCGDAKGMARDVHRTLHTIVQEQENV 535
FSRE + K YVQH + LW L+ + G ++YV GDA+ MA+DV T + IV E +
Sbjct: 539 FSREQAHKVYVQHLLKRDREHLWKLIHEGGAHIYVAGDARNMAKDVQNTFYDIVAEFGPM 598
Query: 536 DSSKAESIVKKFQMEGRYLRDVW 558
+ ++A VKK +GRY +VW
Sbjct: 599 EHTQAVDYVKKLMTKGRYSLNVW 621
>pdb|3OJW|A Chain A, Disulfide Crosslinked Cytochrome P450 Reductase Inactive
pdb|3OJX|A Chain A, Disulfide Crosslinked Cytochrome P450 Reductase Inactive
Length = 622
Score = 402 bits (1033), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/563 (38%), Positives = 316/563 (56%), Gaps = 24/563 (4%)
Query: 4 SIYLRLTCRYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIV 63
S+ + YG+G+PT NA FY W E + L +KF VFGLGN+ YEHFN +G
Sbjct: 75 SLVVFAMATYGEGDPTCNAQDFYDWLQETDVD---LTGVKFAVFGLGNKTYEHFNAMGKY 131
Query: 64 LDEELCKQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELDQLLRDEDDANTVSTPYTAA 123
+D+ L + G R+ LGLGDDD +E+DF WRE WP + + E +T ++
Sbjct: 132 VDQRLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVAEFFGVE------ATGEESS 185
Query: 124 IPEYRVMIH-----GPTVTSSVDNYSNMPNGNASFDIHHPCRVNVAVRRELHKPDSDRSC 178
I +Y +++H T + + N FD +P V R+L++ ++R
Sbjct: 186 IRQYELVVHEDMDVAKVYTGEMGRLKSYENQKPPFDAKNPFLAAVTANRKLNQ-GTERHL 244
Query: 179 IHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKXXXXXXXXXXXXHTDNEDGTPRGS 238
+HLE D+S + I YE+GDHV VY N V + G+ + +E+ S
Sbjct: 245 MHLELDISDSKIRYESGDHVAVYPANDSALVNQIGEILGADLDVIMSLNNLDEE-----S 299
Query: 239 SLTPPFPGPCTLRTALARYADILNPPRKXXXXXXXXXXTEPSEAERLKFL--SSPQGKDD 296
+ PFP P T RTAL Y DI NPPR +EPSE E L + SS +GK+
Sbjct: 300 NKKHPFPTPTTYRTALTYYLDITNPPRTNVLYELAQYASEPSEQEHLHKMASSSGEGKEL 359
Query: 297 YSQWVVASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCA 356
Y WVV ++R +L ++ ++PS PPI + P LQ RYYSI+SS + P+ VH+T
Sbjct: 360 YLSWVVEARRHILAILQDYPSLRPPIDHLLELL-PRLQARYYSIASSSKVHPNSVHITAV 418
Query: 357 LVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPG 416
V +GR++KGV ++W++ P NG + P+F+ S F+LP + P+IMVGPG
Sbjct: 419 AVEYEAKSGRVNKGVATSWLRAKEPAGENGGRALVPMFVCKSQFRLPFKSTTPVIMVGPG 478
Query: 417 TGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVISELILA 476
TG+APF GF+QER L++ G ++G LL++G R D++Y +EL F ++G +++L +A
Sbjct: 479 TGIAPFMGFIQERAWLREQGKEVGETLLYYGARRSDEDYLYREELARFHKDGALTQLNVA 538
Query: 477 FSREGSQKEYVQHKMMDKAAQLWSLLSKEG-YLYVCGDAKGMARDVHRTLHTIVQEQENV 535
FSRE + K YVQH + LW L+ + G ++YVCGDA+ MA+DV T + IV E +
Sbjct: 539 FSREQAHKVYVQHLLKRDREHLWKLIHEGGAHIYVCGDARNMAKDVQNTFYDIVAEFGPM 598
Query: 536 DSSKAESIVKKFQMEGRYLRDVW 558
+ ++A VKK +GRY DVW
Sbjct: 599 EHTQAVDYVKKLMTKGRYSLDVW 621
>pdb|3FJO|A Chain A, Structure Of Chimeric Yh Cpr
Length = 637
Score = 367 bits (941), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/554 (36%), Positives = 298/554 (53%), Gaps = 23/554 (4%)
Query: 13 YGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQG 72
YG+G+ D A F + N L L++ +FGLGN YE FN ++ L G
Sbjct: 98 YGEGDFPDGAVNFEDFIC--NAEAGALSNLRYNMFGLGNSTYEFFNGAAKKAEKHLSAAG 155
Query: 73 GARLVPLGLGDDDQCIED-DFTAWRELVWPELDQLLRDEDDANTVSTPYTAAIPEYRVMI 131
RL LG DD D D+ AW++ + ++L+DE +T ++I +Y +++
Sbjct: 156 AIRLGKLGEADDGAGTTDEDYMAWKDSIL----EVLKDE--LGVEATGEESSIRQYELVV 209
Query: 132 HGPTVTSSV-----DNYSNMPNGNASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFDVS 186
H + V + N FD +P V R+L++ ++R +HLE D+S
Sbjct: 210 HTDIDAAKVYMGEMGRLKSYENQKPPFDAKNPFLAAVTTNRKLNQ-GTERHLMHLELDIS 268
Query: 187 GTGITYETGDHVGVYVENCDETVEEAGKXXXXXXXXXXXXHTDNEDGTPRGSSLTPPFPG 246
+ I YE+GDHV VY N V + GK + +E+ + PFP
Sbjct: 269 DSKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEESNKK-----HPFPC 323
Query: 247 PCTLRTALARYADILNPPRKXXXXXXXXXXTEPSEAERLKFL--SSPQGKDDYSQWVVAS 304
P + RTAL Y DI NPPR +EPSE E L+ + SS +GK+ Y WVV +
Sbjct: 324 PTSYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEA 383
Query: 305 QRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPTPT 364
+R +L ++ + PS PPI + P LQ RYYSI+SS + P+ VH+ +V T
Sbjct: 384 RRHILAILQDCPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETKA 442
Query: 365 GRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRG 424
GRI+KGV + W++ P NG + P+F+R S F+LP + P+IMVGPGTG+APF G
Sbjct: 443 GRINKGVATNWLRAKEPAGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFIG 502
Query: 425 FLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVISELILAFSREGSQK 484
F+QER L+Q G ++G LL++GCR D++Y +EL F +G +++L +AFSRE S K
Sbjct: 503 FIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRDGALTQLNVAFSREQSHK 562
Query: 485 EYVQHKMMDKAAQLWSLLSKEGYLYVCGDAKGMARDVHRTLHTIVQEQENVDSSKAESIV 544
YVQH + LW L+ ++YVCGDA+ MARDV T + IV E ++ ++A +
Sbjct: 563 VYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDYI 622
Query: 545 KKFQMEGRYLRDVW 558
KK +GRY DVW
Sbjct: 623 KKLMTKGRYSLDVW 636
>pdb|3QFS|A Chain A, Crystal Structure Of Nadph-Cytochrome P450 Reductase
(FadNADPH Domain)
Length = 458
Score = 323 bits (829), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 170/443 (38%), Positives = 248/443 (55%), Gaps = 14/443 (3%)
Query: 123 AIPEYRVMIH-----GPTVTSSVDNYSNMPNGNASFDIHHPCRVNVAVRRELHKPDSDRS 177
+I +Y +++H + + N FD +P V R+L++ ++R
Sbjct: 22 SIRQYELVVHTDIDAAKVYMGEMGRLKSYENQKPPFDAKNPFLAAVTTNRKLNQ-GTERH 80
Query: 178 CIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKXXXXXXXXXXXXHTDNEDGTPRG 237
+HLE D+S + I YE+GDHV VY N V + GK + +E+
Sbjct: 81 LMHLELDISDSKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEE----- 135
Query: 238 SSLTPPFPGPCTLRTALARYADILNPPRKXXXXXXXXXXTEPSEAERLKFL--SSPQGKD 295
S+ PFP P + RTAL Y DI NPPR +EPSE E L+ + SS +GK+
Sbjct: 136 SNKKHPFPCPTSYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGEGKE 195
Query: 296 DYSQWVVASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTC 355
Y WVV ++R +L ++ + PS PPI + P LQ RYYSI+SS + P+ VH+
Sbjct: 196 LYLSWVVEARRHILAILQDCPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHICA 254
Query: 356 ALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGP 415
+V T GRI+KGV + W++ P+ NG + P+F+R S F+LP + P+IMVGP
Sbjct: 255 VVVEYETKAGRINKGVATNWLRAKEPVGENGGRALVPMFVRKSQFRLPFKATTPVIMVGP 314
Query: 416 GTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVISELIL 475
GTG+APF GF+QER L+Q G ++G LL++GCR D++Y +EL F +G +++L +
Sbjct: 315 GTGVAPFIGFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRDGALTQLNV 374
Query: 476 AFSREGSQKEYVQHKMMDKAAQLWSLLSKEGYLYVCGDAKGMARDVHRTLHTIVQEQENV 535
AFSRE S K YVQH + LW L+ ++YVCGDA+ MARDV T + IV E +
Sbjct: 375 AFSREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAM 434
Query: 536 DSSKAESIVKKFQMEGRYLRDVW 558
+ ++A +KK +GRY DVW
Sbjct: 435 EHAQAVDYIKKLMTKGRYSLDVW 457
>pdb|3QFT|A Chain A, Crystal Structure Of Nadph-Cytochrome P450 Reductase
(FadNADPH DOMAIN And R457h Mutant)
Length = 458
Score = 322 bits (824), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 168/443 (37%), Positives = 246/443 (55%), Gaps = 14/443 (3%)
Query: 123 AIPEYRVMIH-----GPTVTSSVDNYSNMPNGNASFDIHHPCRVNVAVRRELHKPDSDRS 177
+I +Y +++H + + N FD +P V R+L++ ++R
Sbjct: 22 SIRQYELVVHTDIDAAKVYMGEMGRLKSYENQKPPFDAKNPFLAAVTTNRKLNQ-GTERH 80
Query: 178 CIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKXXXXXXXXXXXXHTDNEDGTPRG 237
+HLE D+S + I YE+GDHV VY N V + GK + +E+ +
Sbjct: 81 LMHLELDISDSKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEESNKKH 140
Query: 238 SSLTPPFPGPCTLRTALARYADILNPPRKXXXXXXXXXXTEPSEAERLKFL--SSPQGKD 295
PFP P + RTAL Y DI NPPR +EPSE E L+ + SS +GK+
Sbjct: 141 -----PFPCPTSYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGEGKE 195
Query: 296 DYSQWVVASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTC 355
Y WVV ++R +L ++ + PS PPI + P LQ YYSI+SS + P+ VH+
Sbjct: 196 LYLSWVVEARRHILAILQDCPSLRPPID-HLCELLPRLQAHYYSIASSSKVHPNSVHICA 254
Query: 356 ALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGP 415
+V T GRI+KGV + W++ P+ NG + P+F+R S F+LP + P+IMVGP
Sbjct: 255 VVVEYETKAGRINKGVATNWLRAKEPVGENGGRALVPMFVRKSQFRLPFKATTPVIMVGP 314
Query: 416 GTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVISELIL 475
GTG+APF GF+QER L+Q G ++G LL++GCR D++Y +EL F +G +++L +
Sbjct: 315 GTGVAPFIGFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRDGALTQLNV 374
Query: 476 AFSREGSQKEYVQHKMMDKAAQLWSLLSKEGYLYVCGDAKGMARDVHRTLHTIVQEQENV 535
AFSRE S K YVQH + LW L+ ++YVCGDA+ MARDV T + IV E +
Sbjct: 375 AFSREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAM 434
Query: 536 DSSKAESIVKKFQMEGRYLRDVW 558
+ ++A +KK +GRY DVW
Sbjct: 435 EHAQAVDYIKKLMTKGRYSLDVW 457
>pdb|2BPO|A Chain A, Crystal Structure Of The Yeast Cpr Triple Mutant: D74g,
Y75f, K78a.
pdb|2BPO|B Chain B, Crystal Structure Of The Yeast Cpr Triple Mutant: D74g,
Y75f, K78a
Length = 682
Score = 245 bits (625), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 184/594 (30%), Positives = 281/594 (47%), Gaps = 68/594 (11%)
Query: 13 YGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQG 72
YG+G+ D A F + N L L++ +FGLGN YE FN ++ L G
Sbjct: 109 YGEGDFPDGAVNFEDFIC--NAEAGALSNLRYNMFGLGNSTYEFFNGAAKKAEKHLSAAG 166
Query: 73 GARLVPLGLGDDDQCIED-DFTAWRELVWPEL-DQLLRDEDDANTVSTPYTAAIPEYRVM 130
RL LG DD D D+ AW++ + L D+L DE +A S + E +
Sbjct: 167 AIRLGKLGEADDGAGTTDEDYMAWKDSILEVLKDELHLDEQEAKFTSQFQYTVLNE---I 223
Query: 131 IHGPTVTSSVDNY--SNMPNGNAS------FDIHHPCRVNVAVRRELHKPDSDRSCIHLE 182
++ +Y S+ N NA FD+ P + REL + DR+CIH E
Sbjct: 224 TDSMSLGEPSAHYLPSHQLNRNADGIQLGPFDLSQPYIAPIVKSRELFSSN-DRNCIHSE 282
Query: 183 FDVSGTGITYETGDHVGVYVENCDETVEEAGKXXXXXXXXXXXXHTDNE---DGTPRGSS 239
FD+SG+ I Y TGDH+ V+ N E VE+ + D E D P +
Sbjct: 283 FDLSGSNIKYSTGDHLAVWPSNPLEKVEQ----------FLSIFNLDPETIFDLKPLDPT 332
Query: 240 LTPPFPGPCTLRTALARYADILNPPRKXXXXXXXXXXTEPSEAERLKFLSSPQGKDDYSQ 299
+ PFP P T+ A+ Y +I P + E+L LS + KD ++
Sbjct: 333 VKVPFPTPTTIGAAIKHYLEITGPVSRQLFSSLIQFAPNADVKEKLTLLS--KDKDQFAV 390
Query: 300 WVVASQRSLLEVMAEFPSA----TPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTC 355
+ + ++ + + T P+ F P + PRYYSISSS VHVT
Sbjct: 391 EITSKYFNIADALKYLSDGAKWDTVPMQ-FLVESVPQMTPRYYSISSSSLSEKQTVHVTS 449
Query: 356 ALVYGPTPT---GRIHKGVCSTWMKNAIPLEGNGDCSWA--------------------P 392
+ P P GV + ++N + N + + P
Sbjct: 450 IVENFPNPELPDAPPVVGVTTNLLRNIQLAQNNVNIAETNLPVHYDLNGPRKLFANYKLP 509
Query: 393 IFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQ------DGAQLGPALLFF 446
+ +R SNF+LP+NPS P+IM+GPGTG+APFRGF++ER+A + + LG +LF+
Sbjct: 510 VHVRRSNFRLPSNPSTPVIMIGPGTGVAPFRGFIRERVAFLESQKKGGNNVSLGKHILFY 569
Query: 447 GCRNRRMDFIYEDELNNFEEEGVIS-ELILAFSR-EGSQKEYVQHKMMDKAAQLWSLLSK 504
G RN DF+Y+DE + ++ S E+++A SR ++K YVQ K+ D Q++ +++
Sbjct: 570 GSRNTD-DFLYQDEWPEYAKKLDGSFEMVVAHSRLPNTKKVYVQDKLKDYEDQVFEMINN 628
Query: 505 EGYLYVCGDAKGMARDVHRTLHTIVQEQENVDSSKAESIVKKFQMEGRYLRDVW 558
++YVCGDAKGMA+ V L I+ +++ + +A ++K + GRY DVW
Sbjct: 629 GAFIYVCGDAKGMAKGVSTALVGILSRGKSITTDEATELIKMLKTSGRYQEDVW 682
>pdb|2BF4|A Chain A, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450
Reductase Suggests A Novel Mechanism Of Electron
Transfer By Diflavin Reductases.
pdb|2BF4|B Chain B, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450
Reductase Suggests A Novel Mechanism Of Electron
Transfer By Diflavin Reductases.
pdb|2BN4|A Chain A, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450
Reductase Suggests A Novel Mechanism Of Electron
Transfer By Diflavin Reductase
pdb|2BN4|B Chain B, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450
Reductase Suggests A Novel Mechanism Of Electron
Transfer By Diflavin Reductase
Length = 682
Score = 245 bits (625), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 184/594 (30%), Positives = 281/594 (47%), Gaps = 68/594 (11%)
Query: 13 YGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQG 72
YG+G+ D A F + N L L++ +FGLGN YE FN ++ L G
Sbjct: 109 YGEGDFPDGAVNFEDFIC--NAEAGALSNLRYNMFGLGNSTYEFFNGAAKKAEKHLSAAG 166
Query: 73 GARLVPLGLGDDDQCIED-DFTAWRELVWPEL-DQLLRDEDDANTVSTPYTAAIPEYRVM 130
RL LG DD D D+ AW++ + L D+L DE +A S + E +
Sbjct: 167 AIRLGKLGEADDGAGTTDEDYMAWKDSILEVLKDELHLDEQEAKFTSQFQYTVLNE---I 223
Query: 131 IHGPTVTSSVDNY--SNMPNGNAS------FDIHHPCRVNVAVRRELHKPDSDRSCIHLE 182
++ +Y S+ N NA FD+ P + REL + DR+CIH E
Sbjct: 224 TDSMSLGEPSAHYLPSHQLNRNADGIQLGPFDLSQPYIAPIVKSRELFSSN-DRNCIHSE 282
Query: 183 FDVSGTGITYETGDHVGVYVENCDETVEEAGKXXXXXXXXXXXXHTDNE---DGTPRGSS 239
FD+SG+ I Y TGDH+ V+ N E VE+ + D E D P +
Sbjct: 283 FDLSGSNIKYSTGDHLAVWPSNPLEKVEQ----------FLSIFNLDPETIFDLKPLDPT 332
Query: 240 LTPPFPGPCTLRTALARYADILNPPRKXXXXXXXXXXTEPSEAERLKFLSSPQGKDDYSQ 299
+ PFP P T+ A+ Y +I P + E+L LS + KD ++
Sbjct: 333 VKVPFPTPTTIGAAIKHYLEITGPVSRQLFSSLIQFAPNADVKEKLTLLS--KDKDQFAV 390
Query: 300 WVVASQRSLLEVMAEFPSA----TPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTC 355
+ + ++ + + T P+ F P + PRYYSISSS VHVT
Sbjct: 391 EITSKYFNIADALKYLSDGAKWDTVPMQ-FLVESVPQMTPRYYSISSSSLSEKQTVHVTS 449
Query: 356 ALVYGPTPT---GRIHKGVCSTWMKNAIPLEGNGDCSWA--------------------P 392
+ P P GV + ++N + N + + P
Sbjct: 450 IVENFPNPELPDAPPVVGVTTNLLRNIQLAQNNVNIAETNLPVHYDLNGPRKLFANYKLP 509
Query: 393 IFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQ------DGAQLGPALLFF 446
+ +R SNF+LP+NPS P+IM+GPGTG+APFRGF++ER+A + + LG +LF+
Sbjct: 510 VHVRRSNFRLPSNPSTPVIMIGPGTGVAPFRGFIRERVAFLESQKKGGNNVSLGKHILFY 569
Query: 447 GCRNRRMDFIYEDELNNFEEEGVIS-ELILAFSR-EGSQKEYVQHKMMDKAAQLWSLLSK 504
G RN DF+Y+DE + ++ S E+++A SR ++K YVQ K+ D Q++ +++
Sbjct: 570 GSRNTD-DFLYQDEWPEYAKKLDGSFEMVVAHSRLPNTKKVYVQDKLKDYEDQVFEMINN 628
Query: 505 EGYLYVCGDAKGMARDVHRTLHTIVQEQENVDSSKAESIVKKFQMEGRYLRDVW 558
++YVCGDAKGMA+ V L I+ +++ + +A ++K + GRY DVW
Sbjct: 629 GAFIYVCGDAKGMAKGVSTALVGILSRGKSITTDEATELIKMLKTSGRYQEDVW 682
>pdb|1TLL|A Chain A, Crystal Structure Of Rat Neuronal Nitric-Oxide Synthase
Reductase Module At 2.3 A Resolution.
pdb|1TLL|B Chain B, Crystal Structure Of Rat Neuronal Nitric-Oxide Synthase
Reductase Module At 2.3 A Resolution
Length = 688
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 175/540 (32%), Positives = 257/540 (47%), Gaps = 33/540 (6%)
Query: 36 GPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGLGDDDQCIEDDFTAW 95
GP L ++F VFGLG+R Y HF G +D L + GG R++ + GD+ E+ F W
Sbjct: 131 GP-LANVRFSVFGLGSRAYPHFCAFGHAVDTLLEELGGERILKMREGDELCGQEEAFRTW 189
Query: 96 RELVWPELDQLLRDEDDANTVSTPYTAAIPEYRVMIHGPTVTSSVDNYSNMPNGNASFDI 155
+ V+ + DD N + P + I R + V ++ G ++
Sbjct: 190 AKKVFKAACDVFCVGDDVN-IEKPNNSLISNDRSWKRNKFRLTYVAEAPDLTQGLSNV-- 246
Query: 156 HHPCRVNVA---VRRELHKPDSDRSCIHLEFDVSGTG-ITYETGDHVGVYVENCDETVE- 210
H RV+ A R+ L P S RS I + +G + Y+ GDH+GV+ N ++ V
Sbjct: 247 -HKKRVSAARLLSRQNLQSPKSSRSTIFVRLHTNGNQELQYQPGDHLGVFPGNHEDLVNA 305
Query: 211 -----EAGKXXXXXXXXXXXXHTDNEDGTPRGSSLTPPFPGPCTLRTALARYADILNPPR 265
E + G P PCT+ A Y DI PP
Sbjct: 306 LIERLEDAPPANHVVKVEMLEERNTALGVISNWKDESRLP-PCTIFQAFKYYLDITTPPT 364
Query: 266 KXXXXXXXXXXTEPSEAERLKFLSSPQGKDDYSQWVVASQRSLLEVMAEFPSATPPIGVF 325
T E +RL LS +G +Y +W +++EV+ EFPS P
Sbjct: 365 PLQLQQFASLATNEKEKQRLLVLS--KGLQEYEEWKWGKNPTMVEVLEEFPSIQMP-ATL 421
Query: 326 FAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGR--IHKGVCSTWMKNAIPLE 383
LQPRYYSISSSP PD VH+T A+V T G +H GVCS+W+ N I +
Sbjct: 422 LLTQLSLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWL-NRIQAD 480
Query: 384 GNGDCSWAPIFIRPS-NFKLPANPSVPIIMVGPGTGLAPFRGFLQER-MALKQDGAQLGP 441
P F+R + +F LP NP VP I+VGPGTG+APFR F Q+R ++ G P
Sbjct: 481 -----DVVPCFVRGAPSFHLPRNPQVPCILVGPGTGIAPFRSFWQQRQFDIQHKGMNPCP 535
Query: 442 ALLFFGCRNRRMDFIYEDELNNFEEEGVISELILAFSREGSQ-KEYVQHKMMDKAAQ--L 498
+L FGCR ++D IY +E + +GV EL A+SRE + K+YVQ + ++ A+
Sbjct: 536 MVLVFGCRQSKIDHIYREETLQAKNKGVFRELYTAYSREPDRPKKYVQDVLQEQLAESVY 595
Query: 499 WSLLSKEGYLYVCGDAKGMARDVHRTLHTIVQEQENVDSSKAESIVKKFQMEGRYLRDVW 558
+L + G++YVCGD MA DV + + I+ +Q + A + + + + RY D++
Sbjct: 596 RALKEQGGHIYVCGDVT-MAADVLKAIQRIMTQQGKLSEEDAGVFISRLRDDNRYHEDIF 654
>pdb|2QTZ|A Chain A, Crystal Structure Of The Nadp+-Bound Fad-Containing
Fnr-Like Module Of Human Methionine Synthase Reductase
Length = 539
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 142/425 (33%), Positives = 221/425 (52%), Gaps = 28/425 (6%)
Query: 160 RVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEA-GKXXXX 218
+V ++ +L D+ ++ + +E D+S T +Y+ GD V N D V+ +
Sbjct: 116 QVPISKAVQLTTNDAIKTTLLVELDISNTDFSYQPGDAFSVICPNSDSEVQSLLQRLQLE 175
Query: 219 XXXXXXXXHTDNEDGTPRGSSLTPPFPGPCTLRTALARYADILNPPRKXXXXXXXXXXTE 278
D +G++L P C+L+ +I P+K ++
Sbjct: 176 DKREHXVLLKIKADTKKKGATLPQHIPAGCSLQFIFTWCLEIRAIPKKAFLRALVDYTSD 235
Query: 279 PSEAERLKFLSSPQGKDDYSQWVVASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYY 338
+E RL+ L S QG DYS++V + LL+++ FPS PP+ + + P LQPR Y
Sbjct: 236 SAEKRRLQELCSKQGAADYSRFVRDAXACLLDLLLAFPSCQPPLSLLLEHL-PKLQPRPY 294
Query: 339 SISSSPRFAPDRVHVTCALV--YGPTPTGRIHKGVCSTWMKNAIP--LEGNGDCS----- 389
S +SS F P ++H +V T + KGVC+ W+ + L+ N S
Sbjct: 295 SCASSSLFHPGKLHFVFNIVEFLSTATTEVLRKGVCTGWLALLVASVLQPNIHASHEDSG 354
Query: 390 --WAP---IFIRPSN-FKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQ---DGAQLG 440
AP IF R +N F LP +PS+PIIMVGPGTG+APF GFLQ R L++ DG G
Sbjct: 355 KALAPKISIFPRTTNSFHLPDDPSIPIIMVGPGTGIAPFIGFLQHREKLQEQHPDG-NFG 413
Query: 441 PALLFFGCRNRRMDFIYEDELNNFEEEGVISELILAFSR------EGSQKEYVQHKMMDK 494
LFFGCR++ D+++ EL +F + G+++ L ++FSR E + +YVQ +
Sbjct: 414 AMWLFFGCRHKDRDYLFRKELRHFLKHGILTHLKVSFSRDAPVGEEEAPAKYVQDNIQLH 473
Query: 495 AAQLWSLLSKE-GYLYVCGDAKGMARDVHRTLHTIVQEQENVDSSKAESIVKKFQMEGRY 553
Q+ +L +E G++YVCGDAK MA+DVH L I+ ++ V+ +A + + E RY
Sbjct: 474 GQQVARILLQENGHIYVCGDAKNMAKDVHDALVQIISKEVGVEKLEAMKTLATLKEEKRY 533
Query: 554 LRDVW 558
L+D+W
Sbjct: 534 LQDIW 538
>pdb|2QTL|A Chain A, Crystal Structure Of The Fad-Containing Fnr-Like Module Of
Human Methionine Synthase Reductase
Length = 539
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 141/425 (33%), Positives = 220/425 (51%), Gaps = 28/425 (6%)
Query: 160 RVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEA-GKXXXX 218
+V ++ +L D+ ++ + +E D+S T +Y+ GD V N D V+ +
Sbjct: 116 QVPISKAVQLTTNDAIKTTLLVELDISNTDFSYQPGDAFSVICPNSDSEVQSLLQRLQLE 175
Query: 219 XXXXXXXXHTDNEDGTPRGSSLTPPFPGPCTLRTALARYADILNPPRKXXXXXXXXXXTE 278
D +G++L P +L+ +I P+K ++
Sbjct: 176 DKREHXVLLKIKADTKKKGATLPQHIPAGXSLQFIFTWCLEIRAIPKKAFLRALVDYTSD 235
Query: 279 PSEAERLKFLSSPQGKDDYSQWVVASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYY 338
+E RL+ L S QG DYS++V + LL+++ FPS PP+ + + P LQPR Y
Sbjct: 236 SAEKRRLQELCSKQGAADYSRFVRDAXACLLDLLLAFPSCQPPLSLLLEHL-PKLQPRPY 294
Query: 339 SISSSPRFAPDRVHVTCALV--YGPTPTGRIHKGVCSTWMKNAIP--LEGNGDCS----- 389
S +SS F P ++H +V T + KGVC+ W+ + L+ N S
Sbjct: 295 SCASSSLFHPGKLHFVFNIVEFLSTATTEVLRKGVCTGWLALLVASVLQPNIHASHEDSG 354
Query: 390 --WAP---IFIRPSN-FKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQ---DGAQLG 440
AP IF R +N F LP +PS+PIIMVGPGTG+APF GFLQ R L++ DG G
Sbjct: 355 KALAPKISIFPRTTNSFHLPDDPSIPIIMVGPGTGIAPFIGFLQHREKLQEQHPDG-NFG 413
Query: 441 PALLFFGCRNRRMDFIYEDELNNFEEEGVISELILAFSR------EGSQKEYVQHKMMDK 494
LFFGCR++ D+++ EL +F + G+++ L ++FSR E + +YVQ +
Sbjct: 414 AMWLFFGCRHKDRDYLFRKELRHFLKHGILTHLKVSFSRDAPVGEEEAPAKYVQDNIQLH 473
Query: 495 AAQLWSLLSKE-GYLYVCGDAKGMARDVHRTLHTIVQEQENVDSSKAESIVKKFQMEGRY 553
Q+ +L +E G++YVCGDAK MA+DVH L I+ ++ V+ +A + + E RY
Sbjct: 474 GQQVARILLQENGHIYVCGDAKNMAKDVHDALVQIISKEVGVEKLEAMKTLATLKEEKRY 533
Query: 554 LRDVW 558
L+D+W
Sbjct: 534 LQDIW 538
>pdb|4DQK|A Chain A, Crystal Structure Of The Fad Binding Domain Of Cytochrome
P450 Bm3
pdb|4DQK|B Chain B, Crystal Structure Of The Fad Binding Domain Of Cytochrome
P450 Bm3
Length = 391
Score = 207 bits (528), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 133/407 (32%), Positives = 199/407 (48%), Gaps = 21/407 (5%)
Query: 155 IHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGK 214
+H NV +EL +P S RS HLE ++ +Y+ GDH+GV N + V
Sbjct: 1 MHGAFSTNVVASKELQQPGSARSTRHLEIELPKEA-SYQEGDHLGVIPRNYEGIVNRVTA 59
Query: 215 XXXXXXXXXXXXHTDNEDGTPRGSSLTPPFPGPCTLRTA-LARYADILNPPRKXXXXXXX 273
+ E P T+ L +Y ++ +P +
Sbjct: 60 RFGLDASQQIRLEAEEEK--------LAHLPLAKTVSVEELLQYVELQDPVTRTQLRAMA 111
Query: 274 XXXTEPSEAERLKFLSSPQGKDDYSQWVVASQRSLLEVMAEFPSATPPIGVFFAAVAPHL 333
P L+ L Q Y + V+A + ++LE++ ++P+ F A + P +
Sbjct: 112 AKTVAPPHKVELEALLEKQA---YKEQVLAKRLTMLELLEKYPACEMKFSEFIALL-PSI 167
Query: 334 QPRYYSISSSPRFAPDRVHVTCALVYGPTPTGR-IHKGVCSTWMKNAIPLEGNGDCSWAP 392
+PRYYSISSSPR + +T ++V G +G +KG+ S ++ GD
Sbjct: 168 RPRYYSISSSPRVDEKQASITVSVVSGEAWSGYGEYKGIASNYLAEL----QEGDTITCF 223
Query: 393 IFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRR 452
I S F LP +P P+IMVGPGTG+APFRGF+Q R LK+ G LG A L+FGCR+
Sbjct: 224 ISTPQSEFTLPKDPETPLIMVGPGTGVAPFRGFVQARKQLKEQGQSLGEAHLYFGCRSPH 283
Query: 453 MDFIYEDELNNFEEEGVISELILAFSREGSQ-KEYVQHKMMDKAAQLWSLLSKEGYLYVC 511
D++Y++EL N + EG+I+ L AFSR +Q K YVQH M +L LL + + Y+C
Sbjct: 284 EDYLYQEELENAQSEGIIT-LHTAFSRMPNQPKTYVQHVMEQDGKKLIELLDQGAHFYIC 342
Query: 512 GDAKGMARDVHRTLHTIVQEQENVDSSKAESIVKKFQMEGRYLRDVW 558
GD MA V TL + V + A +++ + +GRY +DVW
Sbjct: 343 GDGSQMAPAVEATLMKSYADVHQVSEADARLWLQQLEEKGRYAKDVW 389
>pdb|4DQL|A Chain A, Crystal Structure Of The Fad Binding Domain Of Cytochrome
P450 Bm3 In Complex With Nadp+
pdb|4DQL|B Chain B, Crystal Structure Of The Fad Binding Domain Of Cytochrome
P450 Bm3 In Complex With Nadp+
Length = 393
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 133/407 (32%), Positives = 199/407 (48%), Gaps = 21/407 (5%)
Query: 155 IHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGK 214
+H NV +EL +P S RS HLE ++ +Y+ GDH+GV N + V
Sbjct: 3 MHGAFSTNVVASKELQQPGSARSTRHLEIELPKEA-SYQEGDHLGVIPRNYEGIVNRVTA 61
Query: 215 XXXXXXXXXXXXHTDNEDGTPRGSSLTPPFPGPCTLRTA-LARYADILNPPRKXXXXXXX 273
+ E P T+ L +Y ++ +P +
Sbjct: 62 RFGLDASQQIRLEAEEEK--------LAHLPLAKTVSVEELLQYVELQDPVTRTQLRAMA 113
Query: 274 XXXTEPSEAERLKFLSSPQGKDDYSQWVVASQRSLLEVMAEFPSATPPIGVFFAAVAPHL 333
P L+ L Q Y + V+A + ++LE++ ++P+ F A + P +
Sbjct: 114 AKTVCPPHKVELEALLEKQA---YKEQVLAKRLTMLELLEKYPACEMKFSEFIALL-PSI 169
Query: 334 QPRYYSISSSPRFAPDRVHVTCALVYGPTPTGR-IHKGVCSTWMKNAIPLEGNGDCSWAP 392
+PRYYSISSSPR + +T ++V G +G +KG+ S ++ GD
Sbjct: 170 RPRYYSISSSPRVDEKQASITVSVVSGEAWSGYGEYKGIASNYLAEL----QEGDTITCF 225
Query: 393 IFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRR 452
I S F LP +P P+IMVGPGTG+APFRGF+Q R LK+ G LG A L+FGCR+
Sbjct: 226 ISTPQSEFTLPKDPETPLIMVGPGTGVAPFRGFVQARKQLKEQGQSLGEAHLYFGCRSPH 285
Query: 453 MDFIYEDELNNFEEEGVISELILAFSREGSQ-KEYVQHKMMDKAAQLWSLLSKEGYLYVC 511
D++Y++EL N + EG+I+ L AFSR +Q K YVQH M +L LL + + Y+C
Sbjct: 286 EDYLYQEELENAQSEGIIT-LHTAFSRMPNQPKTYVQHVMEQDGKKLIELLDQGAHFYIC 344
Query: 512 GDAKGMARDVHRTLHTIVQEQENVDSSKAESIVKKFQMEGRYLRDVW 558
GD MA V TL + V + A +++ + +GRY +DVW
Sbjct: 345 GDGSQMAPAVEATLMKSYADVHQVSEADARLWLQQLEEKGRYAKDVW 391
>pdb|1F20|A Chain A, Crystal Structure Of Rat Neuronal Nitric-Oxide Synthase
FadNADP+ Domain At 1.9a Resolution
Length = 435
Score = 201 bits (512), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 142/419 (33%), Positives = 204/419 (48%), Gaps = 28/419 (6%)
Query: 157 HPCRVNVA---VRRELHKPDSDRSCIHLEFDVSGTG-ITYETGDHVGVYVENCDETVE-- 210
H RV+ A R+ L P S RS I + +G + Y+ GDH+GV+ N ++ V
Sbjct: 26 HKKRVSAARLLSRQNLQSPKSSRSTIFVRLHTNGNQELQYQPGDHLGVFPGNHEDLVNAL 85
Query: 211 ----EAGKXXXXXXXXXXXXHTDNEDGTPRGSSLTPPFPGPCTLRTALARYADILNPPRK 266
E + G P PCT+ A Y DI PP
Sbjct: 86 IERLEDAPPANHVVKVEMLEERNTALGVISNWKDESRLP-PCTIFQAFKYYLDITTPPTP 144
Query: 267 XXXXXXXXXXTEPSEAERLKFLSSPQGKDDYSQWVVASQRSLLEVMAEFPSATPPIGVFF 326
T E +RL LS +G +Y +W +++EV+ EFPS P
Sbjct: 145 LQLQQFASLATNEKEKQRLLVLS--KGLQEYEEWKWGKNPTMVEVLEEFPSIQMP-ATLL 201
Query: 327 AAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGR--IHKGVCSTWMKNAIPLEG 384
LQPRYYSISSSP PD VH+T A+V T G +H GVCS+W+ N I +
Sbjct: 202 LTQLSLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWL-NRIQAD- 259
Query: 385 NGDCSWAPIFIRPS-NFKLPANPSVPIIMVGPGTGLAPFRGFLQER-MALKQDGAQLGPA 442
P F+R + +F LP NP VP I+VGPGTG+APFR F Q+R ++ G P
Sbjct: 260 ----DVVPCFVRGAPSFHLPRNPQVPCILVGPGTGIAPFRSFWQQRQFDIQHKGMNPCPM 315
Query: 443 LLFFGCRNRRMDFIYEDELNNFEEEGVISELILAFSREGSQ-KEYVQHKMMDKAAQ--LW 499
+L FGCR ++D IY +E + +GV EL A+SRE + K+YVQ + ++ A+
Sbjct: 316 VLVFGCRQSKIDHIYREETLQAKNKGVFRELYTAYSREPDRPKKYVQDVLQEQLAESVYR 375
Query: 500 SLLSKEGYLYVCGDAKGMARDVHRTLHTIVQEQENVDSSKAESIVKKFQMEGRYLRDVW 558
+L + G++YVCGD MA DV + + I+ +Q + A + + + + RY D++
Sbjct: 376 ALKEQGGHIYVCGDVT-MAADVLKAIQRIMTQQGKLSEEDAGVFISRLRDDNRYHEDIF 433
>pdb|1DDG|A Chain A, Crystal Structure Of Sir-Fp60
pdb|1DDG|B Chain B, Crystal Structure Of Sir-Fp60
pdb|1DDI|A Chain A, Crystal Structure Of Sir-Fp60
Length = 374
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 136/227 (59%), Gaps = 11/227 (4%)
Query: 333 LQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAP 392
L PR YSI+SS + VHVT +V GR G S+++ + + EG
Sbjct: 158 LTPRLYSIASSQAEVENEVHVTVGVVRYDV-EGRARAGGASSFLADRVEEEGE-----VR 211
Query: 393 IFIRPS-NFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNR 451
+FI + NF+LPANP P+IM+GPGTG+APFR F+Q+R A + G LFFG +
Sbjct: 212 VFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAADEAPGKNW----LFFGNPHF 267
Query: 452 RMDFIYEDELNNFEEEGVISELILAFSREGSQKEYVQHKMMDKAAQLWSLLSKEGYLYVC 511
DF+Y+ E + +EGV++ + LA+SR+ +K YVQ K+ ++ A+LW ++ ++YVC
Sbjct: 268 TEDFLYQVEWQRYVKEGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVC 327
Query: 512 GDAKGMARDVHRTLHTIVQEQENVDSSKAESIVKKFQMEGRYLRDVW 558
GDA MA+DV + L ++ E +D+ A+ + + ++E RY RDV+
Sbjct: 328 GDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY 374
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 33/54 (61%)
Query: 158 PCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEE 211
P +++V +++ +S++ H+E D+ +G+ Y+ GD +GV+ +N V+E
Sbjct: 11 PLVASLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKE 64
>pdb|1B1C|A Chain A, Crystal Structure Of The Fmn-Binding Domain Of Human
Cytochrome P450 Reductase At 1.93a Resolution
Length = 181
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 13 YGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQG 72
YG+G+PTDNA FY W E + L +KF VFGLGN+ YEHFN +G +D+ L + G
Sbjct: 80 YGEGDPTDNAQDFYDWLQETDVD---LSGVKFAVFGLGNKTYEHFNAMGKYVDKRLEQLG 136
Query: 73 GARLVPLGLGDDDQCIEDDFTAWRELVWP 101
R+ LGLGDDD +E+DF WRE WP
Sbjct: 137 AQRIFELGLGDDDGNLEEDFITWREQFWP 165
>pdb|1GAQ|A Chain A, Crystal Structure Of The Complex Between Ferredoxin And
Ferredoxin-Nadp+ Reductase
pdb|1GAQ|C Chain C, Crystal Structure Of The Complex Between Ferredoxin And
Ferredoxin-Nadp+ Reductase
pdb|1GAW|A Chain A, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Maize Leaf
pdb|1GAW|B Chain B, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Maize Leaf
Length = 314
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 23/229 (10%)
Query: 322 IGVFFAAVAPHLQP---RYYSISSSP--RFAPDRVHVTCA--LVYGPTPTGRIHKGVCST 374
IGV V + +P R YSI+SS F + C L+Y G I KGVCS
Sbjct: 76 IGVIADGVDKNGKPHKVRLYSIASSAIGDFGDSKTVSLCVKRLIY-TNDAGEIVKGVCSN 134
Query: 375 WMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQ 434
++ + P G+ P+ +P +P+ IIM+ GTG+APFR FL + K
Sbjct: 135 FLCDLQP--GDNVQITGPV---GKEMLMPKDPNATIIMLATGTGIAPFRSFLWKMFFEKH 189
Query: 435 DGAQL-GPALLFFGCRNRRMDFIYEDELNNFEEEGVIS-ELILAFSRE----GSQKEYVQ 488
D + G LF G +Y++E +E + + A SRE ++ Y+Q
Sbjct: 190 DDYKFNGLGWLFLGVPTSS-SLLYKEEFGKMKERAPENFRVDYAVSREQTNAAGERMYIQ 248
Query: 489 HKMMDKAAQLWSLLSKEG-YLYVCGDAKGMARDVHRTLHTIVQEQENVD 536
+M + +LW LL K+ Y+Y+CG KGM + + + ++ E++ +D
Sbjct: 249 TRMAEYKEELWELLKKDNTYVYMCG-LKGMEKGIDDIMVSLA-EKDGID 295
>pdb|3VO2|A Chain A, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Iii
pdb|3VO2|B Chain B, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Iii
Length = 310
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 111/228 (48%), Gaps = 23/228 (10%)
Query: 331 PHLQPRYYSISSSP--RFAPDRVHVTCA--LVYGPTPTGRIHKGVCSTWMKNAIPLEGNG 386
PH + R YSI+SS F + C LVY G I KGVCS ++ + P G
Sbjct: 85 PH-KLRLYSIASSALGDFGDSKTVSLCVKRLVY-TNDQGEIVKGVCSNFLCDLKP--GAD 140
Query: 387 DCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALK--QDGAQLGPALL 444
P+ +P +P+ +IM+ GTG+APFR FL +M L+ +D G A L
Sbjct: 141 VKITGPV---GKEMLMPKDPNATVIMLATGTGIAPFRSFLW-KMFLEEHEDYKFSGLAWL 196
Query: 445 FFGCRNRRMDFIYEDELNNFEEEGVIS-ELILAFSRE----GSQKEYVQHKMMDKAAQLW 499
F G +Y++EL +E + L A SRE +K Y+Q +M + +LW
Sbjct: 197 FLGVPTSD-SLLYKEELEKMKEMAPDNFRLDFAVSREQTNAAGEKMYIQTRMAEYREELW 255
Query: 500 SLLSKEG-YLYVCGDAKGMARDVHRTLHTIVQEQENVDSSKAESIVKK 546
LL K+ Y+Y+CG KGM + + + + ++ +D + + +KK
Sbjct: 256 ELLKKDNTYVYMCG-LKGMEKGIDDIMLNLAA-KDGIDWMQYKKQLKK 301
>pdb|3VO1|A Chain A, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Ii
pdb|3VO1|B Chain B, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Ii
Length = 314
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 98/202 (48%), Gaps = 20/202 (9%)
Query: 331 PHLQPRYYSISSSP--RFAPDRVHVTCA--LVYGPTPTGRIHKGVCSTWMKNAIPLEGNG 386
PH + R YSI+SS F + C LVY G + KGVCS ++ + P G
Sbjct: 89 PH-KLRLYSIASSALGDFGDSKTVSLCVKRLVY-TNDQGEVVKGVCSNFLCDLKP--GAE 144
Query: 387 DCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALK-QDGAQLGPALLF 445
P+ +P +P+ IIM+ GTG+APFR FL + + +D G A LF
Sbjct: 145 VKITGPV---GKEMLMPKDPNATIIMLATGTGIAPFRSFLWKMFFEEHEDYKYTGLAWLF 201
Query: 446 FGCRNRRMDFIYEDELNNFEEEGVIS-ELILAFSRE----GSQKEYVQHKMMDKAAQLWS 500
G +Y++EL +E + L A SRE +K Y+Q +M + +LW
Sbjct: 202 LGVPTSDT-LLYKEELEKMKEMAPDNFRLDFAVSREQTNAAGEKMYIQTRMAEYKEELWE 260
Query: 501 LLSKEG-YLYVCGDAKGMARDV 521
LL K+ Y+Y+CG KGM + +
Sbjct: 261 LLKKDNTYVYMCG-LKGMEKGI 281
>pdb|1SM4|A Chain A, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Paprika
pdb|1SM4|B Chain B, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Paprika
Length = 296
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 109/254 (42%), Gaps = 53/254 (20%)
Query: 322 IGVFFAAVAPHLQP---RYYSISSSP--RFAPDRVHVTCA--LVYGPTPTGRIHKGVCST 374
IGV V + +P R YSI+SS F + C LVY G KGVCS
Sbjct: 58 IGVIADGVDANGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVY-TNDKGEEVKGVCSN 116
Query: 375 WMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQ 434
++ + P G P+ +P +P+ +IM+G GTG+APFR FL + K
Sbjct: 117 FLCDLKP--GADVKITGPV---GKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKH 171
Query: 435 DGAQL-GPALLFFGC--------------------RNRRMDFIYEDELNNFEEEGVISEL 473
D + G A LF G N R+DF E N
Sbjct: 172 DDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQTN---------- 221
Query: 474 ILAFSREGSQKEYVQHKMMDKAAQLWSLLSKEG-YLYVCGDAKGMARDVHRTLHTIVQEQ 532
E +K Y+Q +M A +LW+LL K+ ++Y+CG KGM + + + ++ +
Sbjct: 222 ------EKGEKMYIQTRMAQYAEELWTLLKKDNTFVYMCG-LKGMEQGIDDIMSSLAA-K 273
Query: 533 ENVDSSKAESIVKK 546
E +D + + +KK
Sbjct: 274 EGIDWADYKKQLKK 287
>pdb|4AF6|A Chain A, Pea Fnr L268v Mutant
pdb|4AF6|B Chain B, Pea Fnr L268v Mutant
Length = 308
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 107/226 (47%), Gaps = 19/226 (8%)
Query: 331 PHLQPRYYSISSSP--RFAPDRVHVTCA--LVYGPTPTGRIHKGVCSTWMKNAIPLEGNG 386
PH + R YSI+SS F + C LVY G + KGVCS ++ + P G+
Sbjct: 83 PH-KLRLYSIASSAIGDFGDSKTVSLCVKRLVY-TNDAGEVVKGVCSNFLCDLKP--GSE 138
Query: 387 DCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQL-GPALLF 445
P+ +P +P+ +IM+G GTG+APFR FL + K + Q G A LF
Sbjct: 139 VKITGPV---GKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLF 195
Query: 446 FGCRNRRMDFIYEDELNNFEEEGVISELILAFSRE----GSQKEYVQHKMMDKAAQLWSL 501
G E+ E+ L A SRE +K Y+Q +M A +LW L
Sbjct: 196 LGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWEL 255
Query: 502 LSKEG-YLYVCGDAKGMARDVHRTLHTIVQEQENVDSSKAESIVKK 546
L K+ ++Y+CG KGM + + + ++ ++ +D + + +KK
Sbjct: 256 LKKDNTFVYMCG-VKGMEKGIDDIMVSLAA-KDGIDWIEYKRTLKK 299
>pdb|3MHP|A Chain A, Fnr-Recruitment To The Thylakoid
pdb|3MHP|B Chain B, Fnr-Recruitment To The Thylakoid
Length = 296
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 107/226 (47%), Gaps = 19/226 (8%)
Query: 331 PHLQPRYYSISSSP--RFAPDRVHVTCA--LVYGPTPTGRIHKGVCSTWMKNAIPLEGNG 386
PH + R YSI+SS F + C LVY G + KGVCS ++ + P G+
Sbjct: 70 PH-KLRLYSIASSAIGDFGDSKTVSLCVKRLVY-TNDAGEVVKGVCSNFLCDLKP--GSE 125
Query: 387 DCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQL-GPALLF 445
P+ +P +P+ +IM+G GTG+APFR FL + K + Q G A LF
Sbjct: 126 VKITGPV---GKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLF 182
Query: 446 FGCRNRRMDFIYEDELNNFEEEGVISELILAFSRE----GSQKEYVQHKMMDKAAQLWSL 501
G E+ E+ L A SRE +K Y+Q +M A +LW L
Sbjct: 183 LGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWEL 242
Query: 502 LSKEG-YLYVCGDAKGMARDVHRTLHTIVQEQENVDSSKAESIVKK 546
L K+ ++Y+CG KGM + + + ++ ++ +D + + +KK
Sbjct: 243 LKKDNTFVYMCG-LKGMEKGIDDIMVSLAA-KDGIDWIEYKRTLKK 286
>pdb|1QG0|A Chain A, Wild-type Pea Fnr
pdb|1QG0|B Chain B, Wild-type Pea Fnr
Length = 308
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 107/226 (47%), Gaps = 19/226 (8%)
Query: 331 PHLQPRYYSISSSP--RFAPDRVHVTCA--LVYGPTPTGRIHKGVCSTWMKNAIPLEGNG 386
PH + R YSI+SS F + C LVY G + KGVCS ++ + P G+
Sbjct: 83 PH-KLRLYSIASSAIGDFGDSKTVSLCVKRLVY-TNDAGEVVKGVCSNFLCDLKP--GSE 138
Query: 387 DCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQL-GPALLF 445
P+ +P +P+ +IM+G GTG+APFR FL + K + Q G A LF
Sbjct: 139 VKITGPV---GKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLF 195
Query: 446 FGCRNRRMDFIYEDELNNFEEEGVISELILAFSRE----GSQKEYVQHKMMDKAAQLWSL 501
G E+ E+ L A SRE +K Y+Q +M A +LW L
Sbjct: 196 LGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWEL 255
Query: 502 LSKEG-YLYVCGDAKGMARDVHRTLHTIVQEQENVDSSKAESIVKK 546
L K+ ++Y+CG KGM + + + ++ ++ +D + + +KK
Sbjct: 256 LKKDNTFVYMCG-LKGMEKGIDDIMVSLAA-KDGIDWIEYKRTLKK 299
>pdb|1QGA|A Chain A, Pea Fnr Y308w Mutant In Complex With Nadp+
pdb|1QGA|B Chain B, Pea Fnr Y308w Mutant In Complex With Nadp+
Length = 308
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 107/226 (47%), Gaps = 19/226 (8%)
Query: 331 PHLQPRYYSISSSP--RFAPDRVHVTCA--LVYGPTPTGRIHKGVCSTWMKNAIPLEGNG 386
PH + R YSI+SS F + C LVY G + KGVCS ++ + P G+
Sbjct: 83 PH-KLRLYSIASSAIGDFGDSKTVSLCVKRLVY-TNDAGEVVKGVCSNFLCDLKP--GSE 138
Query: 387 DCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQL-GPALLF 445
P+ +P +P+ +IM+G GTG+APFR FL + K + Q G A LF
Sbjct: 139 VKITGPV---GKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLF 195
Query: 446 FGCRNRRMDFIYEDELNNFEEEGVISELILAFSRE----GSQKEYVQHKMMDKAAQLWSL 501
G E+ E+ L A SRE +K Y+Q +M A +LW L
Sbjct: 196 LGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWEL 255
Query: 502 LSKEG-YLYVCGDAKGMARDVHRTLHTIVQEQENVDSSKAESIVKK 546
L K+ ++Y+CG KGM + + + ++ ++ +D + + +KK
Sbjct: 256 LKKDNTFVYMCG-LKGMEKGIDDIMVSLAA-KDGIDWIEYKRTLKK 299
>pdb|1QFY|A Chain A, Pea Fnr Y308s Mutant In Complex With Nadp+
pdb|1QFY|B Chain B, Pea Fnr Y308s Mutant In Complex With Nadp+
pdb|1QFZ|A Chain A, Pea Fnr Y308s Mutant In Complex With Nadph
pdb|1QFZ|B Chain B, Pea Fnr Y308s Mutant In Complex With Nadph
Length = 308
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 107/226 (47%), Gaps = 19/226 (8%)
Query: 331 PHLQPRYYSISSSP--RFAPDRVHVTCA--LVYGPTPTGRIHKGVCSTWMKNAIPLEGNG 386
PH + R YSI+SS F + C LVY G + KGVCS ++ + P G+
Sbjct: 83 PH-KLRLYSIASSAIGDFGDSKTVSLCVKRLVY-TNDAGEVVKGVCSNFLCDLKP--GSE 138
Query: 387 DCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQL-GPALLF 445
P+ +P +P+ +IM+G GTG+APFR FL + K + Q G A LF
Sbjct: 139 VKITGPV---GKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLF 195
Query: 446 FGCRNRRMDFIYEDELNNFEEEGVISELILAFSRE----GSQKEYVQHKMMDKAAQLWSL 501
G E+ E+ L A SRE +K Y+Q +M A +LW L
Sbjct: 196 LGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWEL 255
Query: 502 LSKEG-YLYVCGDAKGMARDVHRTLHTIVQEQENVDSSKAESIVKK 546
L K+ ++Y+CG KGM + + + ++ ++ +D + + +KK
Sbjct: 256 LKKDNTFVYMCG-LKGMEKGIDDIMVSLAA-KDGIDWIEYKRTLKK 299
>pdb|1BX0|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase)
Mutant E312l
Length = 314
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 107/230 (46%), Gaps = 27/230 (11%)
Query: 331 PHLQPRYYSISSSP--RFAPDRVHVTCA--LVYGPTPTGRIHKGVCSTWMKNAIPLEGNG 386
PH + R YSI+SS F + C L+Y G KGVCS ++ + P G
Sbjct: 89 PH-KLRLYSIASSALGDFGDAKSVSLCVKRLIY-TNDAGETIKGVCSNFLCDLKP--GAE 144
Query: 387 DCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQL-GPALLF 445
P+ +P +P+ IIM+G GTG+APFR FL + K D + G A LF
Sbjct: 145 VKLTGPV---GKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLF 201
Query: 446 FGCRNRRMDFIYEDEL--------NNFEEEGVISELILAFSREGSQKEYVQHKMMDKAAQ 497
G +Y++E +NF + +S + E +K Y+Q +M A +
Sbjct: 202 LGVPTSS-SLLYKEEFEKMKEKAPDNFRLDFAVSR---EQTNEKGEKMYIQTRMAQYAVE 257
Query: 498 LWSLLSKEG-YLYVCGDAKGMARDVHRTLHTIVQEQENVDSSKAESIVKK 546
LW +L K+ Y Y+CG KGM + + + ++ E +D + + +KK
Sbjct: 258 LWEMLKKDNTYFYMCG-LKGMEKGIDDIMVSLAA-AEGIDWIEYKRQLKK 305
>pdb|1FNB|A Chain A, Refined Crystal Structure Of Spinach Ferredoxin Reductase
At 1.7 Angstroms Resolution: Oxidized, Reduced, And 2'-
Phospho-5'-Amp Bound States
pdb|1FNC|A Chain A, Refined Crystal Structure Of Spinach Ferredoxin Reductase
At 1.7 Angstroms Resolution: Oxidized, Reduced, And 2'-
Phospho-5'-Amp Bound States
pdb|1FND|A Chain A, Refined Crystal Structure Of Spinach Ferredoxin Reductase
At 1.7 Angstroms Resolution: Oxidized, Reduced, And 2'-
Phospho-5'-Amp Bound States
Length = 314
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 108/230 (46%), Gaps = 27/230 (11%)
Query: 331 PHLQPRYYSISSSP--RFAPDRVHVTCA--LVYGPTPTGRIHKGVCSTWMKNAIPLEGNG 386
PH + R YSI+SS F + C L+Y G KGVCS ++ + P G
Sbjct: 89 PH-KLRLYSIASSALGDFGDAKSVSLCVKRLIY-TNDAGETIKGVCSNFLCDLKP--GAE 144
Query: 387 DCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQL-GPALLF 445
P+ +P +P+ IIM+G GTG+APFR FL + K D + G A LF
Sbjct: 145 VKLTGPV---GKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLF 201
Query: 446 FGCRNRRMDFIYEDEL--------NNFEEEGVISELILAFSREGSQKEYVQHKMMDKAAQ 497
G +Y++E +NF + +S + E +K Y+Q +M A +
Sbjct: 202 LGVPTSS-SLLYKEEFEKMKEKAPDNFRLDFAVSR---EQTNEKGEKMYIQTRMAQYAVE 257
Query: 498 LWSLLSKEG-YLYVCGDAKGMARDVHRTLHTIVQEQENVDSSKAESIVKK 546
LW +L K+ Y+Y+CG KGM + + + ++ E +D + + +KK
Sbjct: 258 LWEMLKKDNTYVYMCG-LKGMEKGIDDIMVSLAA-AEGIDWIEYKRQLKK 305
>pdb|1FRQ|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase)
Mutant E312a
Length = 314
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 102/242 (42%), Gaps = 51/242 (21%)
Query: 331 PHLQPRYYSISSSP--RFAPDRVHVTCA--LVYGPTPTGRIHKGVCSTWMKNAIPLEGNG 386
PH + R YSI+SS F + C L+Y G KGVCS ++ + P G
Sbjct: 89 PH-KLRLYSIASSALGDFGDAKSVSLCVKRLIY-TNDAGETIKGVCSNFLCDLKP--GAE 144
Query: 387 DCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQL-GPALLF 445
P+ +P +P+ IIM+G GTG+APFR FL + K D + G A LF
Sbjct: 145 VKLTGPV---GKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLF 201
Query: 446 FGC--------------------RNRRMDFIYEDELNNFEEEGVISELILAFSREGSQKE 485
G N R+DF E N E +K
Sbjct: 202 LGVPTSSSLLYKEEFEKMKEKAPDNFRLDFAVSREQTN----------------EKGEKM 245
Query: 486 YVQHKMMDKAAQLWSLLSKEG-YLYVCGDAKGMARDVHRTLHTIVQEQENVDSSKAESIV 544
Y+Q +M A +LW +L K+ Y Y+CG KGM + + + ++ E +D + + +
Sbjct: 246 YIQTRMAQYAVELWEMLKKDNTYFYMCG-LKGMEKGIDDIMVSLAA-AEGIDWIEYKRQL 303
Query: 545 KK 546
KK
Sbjct: 304 KK 305
>pdb|1BX1|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase)
Mutant E312q
Length = 314
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 102/242 (42%), Gaps = 51/242 (21%)
Query: 331 PHLQPRYYSISSSP--RFAPDRVHVTCA--LVYGPTPTGRIHKGVCSTWMKNAIPLEGNG 386
PH + R YSI+SS F + C L+Y G KGVCS ++ + P G
Sbjct: 89 PH-KLRLYSIASSALGDFGDAKSVSLCVKRLIY-TNDAGETIKGVCSNFLCDLKP--GAE 144
Query: 387 DCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQL-GPALLF 445
P+ +P +P+ IIM+G GTG+APFR FL + K D + G A LF
Sbjct: 145 VKLTGPV---GKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLF 201
Query: 446 FGC--------------------RNRRMDFIYEDELNNFEEEGVISELILAFSREGSQKE 485
G N R+DF E N E +K
Sbjct: 202 LGVPTSSSLLYKEEFEKMKEKAPDNFRLDFAVSREQTN----------------EKGEKM 245
Query: 486 YVQHKMMDKAAQLWSLLSKEG-YLYVCGDAKGMARDVHRTLHTIVQEQENVDSSKAESIV 544
Y+Q +M A +LW +L K+ Y Y+CG KGM + + + ++ E +D + + +
Sbjct: 246 YIQTRMAQYAVELWEMLKKDNTYFYMCG-LKGMEKGIDDIMVSLAA-AEGIDWIEYKRQL 303
Query: 545 KK 546
KK
Sbjct: 304 KK 305
>pdb|4AF7|A Chain A, Pea Fnr C266m Mutant
pdb|4AF7|B Chain B, Pea Fnr C266m Mutant
Length = 308
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 106/226 (46%), Gaps = 19/226 (8%)
Query: 331 PHLQPRYYSISSSP--RFAPDRVHVTCA--LVYGPTPTGRIHKGVCSTWMKNAIPLEGNG 386
PH + R YSI+SS F + C LVY G + KGVCS ++ + P G+
Sbjct: 83 PH-KLRLYSIASSAIGDFGDSKTVSLCVKRLVY-TNDAGEVVKGVCSNFLCDLKP--GSE 138
Query: 387 DCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQL-GPALLF 445
P+ +P +P+ +IM+G GTG+APFR FL + K + Q G A LF
Sbjct: 139 VKITGPV---GKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLF 195
Query: 446 FGCRNRRMDFIYEDELNNFEEEGVISELILAFSRE----GSQKEYVQHKMMDKAAQLWSL 501
G E+ E+ L A SRE +K Y+Q +M A +LW L
Sbjct: 196 LGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWEL 255
Query: 502 LSKEG-YLYVCGDAKGMARDVHRTLHTIVQEQENVDSSKAESIVKK 546
L K+ ++Y+ G KGM + + + ++ ++ +D + + +KK
Sbjct: 256 LKKDNTFVYMMG-LKGMEKGIDDIMVSLAA-KDGIDWIEYKRTLKK 299
>pdb|1FRN|A Chain A, The Involvement Of Ser96 In The Catalytic Mechanism Of
Ferredoxin-Nadp+ Reductase: Structure-Function
Relationship As Studied By Site-Directed Mutagenesis And
X- Ray Crystallography
Length = 314
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 101/242 (41%), Gaps = 51/242 (21%)
Query: 331 PHLQPRYYSISSSP--RFAPDRVHVTCA--LVYGPTPTGRIHKGVCSTWMKNAIPLEGNG 386
PH + R Y I+SS F + C L+Y G KGVCS ++ + P G
Sbjct: 89 PH-KLRLYVIASSALGDFGDAKSVSLCVKRLIY-TNDAGETIKGVCSNFLCDLKP--GAE 144
Query: 387 DCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQL-GPALLF 445
P+ +P +P+ IIM+G GTG+APFR FL + K D + G A LF
Sbjct: 145 VKLTGPV---GKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLF 201
Query: 446 FGC--------------------RNRRMDFIYEDELNNFEEEGVISELILAFSREGSQKE 485
G N R+DF E N E +K
Sbjct: 202 LGVPTSSSLLYKEEFEKMKEKAPDNFRLDFAVSREQTN----------------EKGEKM 245
Query: 486 YVQHKMMDKAAQLWSLLSKEG-YLYVCGDAKGMARDVHRTLHTIVQEQENVDSSKAESIV 544
Y+Q +M A +LW +L K+ Y Y+CG KGM + + + ++ E +D + + +
Sbjct: 246 YIQTRMAQYAVELWEMLKKDNTYFYMCG-LKGMEKGIDDIMVSLAA-AEGIDWIEYKRQL 303
Query: 545 KK 546
KK
Sbjct: 304 KK 305
>pdb|2XNC|A Chain A, Crystal Structure Of An Engineered Ferredoxin Nadp
Reductase (Fnr) From Pisum Sativum
pdb|2XNC|B Chain B, Crystal Structure Of An Engineered Ferredoxin Nadp
Reductase (Fnr) From Pisum Sativum
Length = 315
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 24/224 (10%)
Query: 331 PHLQPRYYSISSSP--RFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDC 388
PH + R YSI+SS F + C R+ GVCS ++ + P G+
Sbjct: 98 PH-KLRLYSIASSAIGDFGDSKTVSLC--------VKRVPDGVCSNFLCDLKP--GSEVK 146
Query: 389 SWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQL-GPALLFFG 447
P+ +P +P+ +IM+G GTG+APFR FL + K + Q G A LF G
Sbjct: 147 ITGPV---GKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLFLG 203
Query: 448 CRNRRMDFIYEDELNNFEEEGVISELILAFSRE----GSQKEYVQHKMMDKAAQLWSLLS 503
E+ E+ L A SRE +K Y+Q +M A +LW LL
Sbjct: 204 VPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLK 263
Query: 504 KEG-YLYVCGDAKGMARDVHRTLHTIVQEQENVDSSKAESIVKK 546
K+ ++Y+CG KGM + + + ++ ++ +D + + +KK
Sbjct: 264 KDNTFVYMCG-LKGMEKGIDDIMVSLAA-KDGIDWIEYKRTLKK 305
>pdb|2B5O|A Chain A, Ferredoxin-nadp Reductase
pdb|2B5O|B Chain B, Ferredoxin-nadp Reductase
Length = 402
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 96/207 (46%), Gaps = 20/207 (9%)
Query: 331 PHLQPRYYSISSSPR--FAPDRVHVTCA--LVYGPTPTGRIHKGVCSTWMKNAIPLEGNG 386
PH + R YSI+S+ ++ C L Y +G GVCST++ N +P+ +
Sbjct: 175 PH-KLRLYSIASTRHGDMEDNKTVSLCVRQLEYQDPESGETVYGVCSTYLCN-LPVGTDD 232
Query: 387 DCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQ--DGAQLGPALL 444
P+ LP + ++M+ GTG+APFR FL RM +Q D G A L
Sbjct: 233 VKITGPV---GKEMLLPDDEDATVVMLATGTGIAPFRAFLW-RMFKEQHEDYKFKGKAWL 288
Query: 445 FFGCRNRRMDFIYEDELNNFEEEGVIS-ELILAFSREGSQ----KEYVQHKMMDKAAQLW 499
FG + +Y+D+ E + L A SRE K YVQ ++ + A +L+
Sbjct: 289 IFGV-PYTANILYKDDFEKMAAENPDNFRLTYAISREQKTADGGKVYVQSRVSEYADELF 347
Query: 500 SLLSK-EGYLYVCGDAKGMARDVHRTL 525
++ K ++Y+CG KGM + T
Sbjct: 348 EMIQKPNTHVYMCG-LKGMQPPIDETF 373
>pdb|1QUF|A Chain A, X-Ray Structure Of A Complex Nadp+-Ferredoxin:nadp+
Reductase From The Cyanobacterium Anabaena Pcc 7119 At
2.25 Angstroms
Length = 304
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 98/219 (44%), Gaps = 27/219 (12%)
Query: 322 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 373
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 61 IGIIPPGVDKNGKPEKLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 119
Query: 374 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALK 433
T++ + P G+ P+ LP +P +IM+ GTG+AP R +L
Sbjct: 120 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDA 174
Query: 434 QDGAQ-----LGPALLFFGCRNRRMDFIYEDELNNFEEEGVIS-ELILAFSREGSQKE-- 485
+ A G + L FG + +Y++EL +++ + L A SRE +
Sbjct: 175 ERAANPEYQFKGFSWLVFGVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGG 233
Query: 486 --YVQHKMMDKAAQLWSLLSKEG-YLYVCGDAKGMARDV 521
Y+Q ++ + A QLW L+ E + Y+CG +GM +
Sbjct: 234 RMYIQDRVAEHADQLWQLIKNEKTHTYICG-LRGMEEGI 271
>pdb|1JB9|A Chain A, Crystal Structure Of The Ferredoxin:nadp+ Reductase From
Maize Root At 1.7 Angstroms
Length = 316
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 104/231 (45%), Gaps = 29/231 (12%)
Query: 336 RYYSISSSPRFAPD---RVHVTC---ALVYGPTPTGR---IHKGVCSTWMKNAIP---LE 383
R YSI+S+ R+ + R C A+ Y P TG+ GVCS ++ N+ P ++
Sbjct: 91 RLYSIAST-RYGDNFDGRTGSLCVRRAVYYDPE-TGKEDPSKNGVCSNFLCNSKPGDKIQ 148
Query: 384 GNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGP-A 442
G I + P +P+ IM+ GTG+APFRG+L+ + G A
Sbjct: 149 LTGPS--GKIMLLPEE-----DPNATHIMIATGTGVAPFRGYLRRMFMEDVPNYRFGGLA 201
Query: 443 LLFFGCRNRRMDFIYEDELNNFEEEGVIS-ELILAFSREGSQ----KEYVQHKMMDKAAQ 497
LF G N +Y++E ++ ++ + A SRE K YVQ K+ + + +
Sbjct: 202 WLFLGVANSD-SLLYDEEFTSYLKQYPDNFRYDKALSREQKNRSGGKMYVQDKIEEYSDE 260
Query: 498 LWSLLSKEGYLYVCGDAKGMARDVHRTLHTIVQEQENVDSSKAESIVKKFQ 548
++ LL ++Y CG KGM + TL + + + K + K Q
Sbjct: 261 IFKLLDGGAHIYFCG-LKGMMPGIQDTLKKVAERRGESWDQKLAQLKKNKQ 310
>pdb|3LVB|A Chain A, Crystal Structure Of The Ferredoxin:nadp+ Reductase From
Maize Root At 1.7 Angstroms - Test Set Withheld
Length = 311
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 104/231 (45%), Gaps = 29/231 (12%)
Query: 336 RYYSISSSPRFAPD---RVHVTC---ALVYGPTPTGR---IHKGVCSTWMKNAIP---LE 383
R YSI+S+ R+ + R C A+ Y P TG+ GVCS ++ N+ P ++
Sbjct: 86 RLYSIAST-RYGDNFDGRTGSLCVRRAVYYDPE-TGKEDPSKNGVCSNFLCNSKPGDKIQ 143
Query: 384 GNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGP-A 442
G I + P +P+ IM+ GTG+APFRG+L+ + G A
Sbjct: 144 LTGPS--GKIMLLPEE-----DPNATHIMIATGTGVAPFRGYLRRMFMEDVPNYRFGGLA 196
Query: 443 LLFFGCRNRRMDFIYEDELNNFEEEGVIS-ELILAFSREGSQ----KEYVQHKMMDKAAQ 497
LF G N +Y++E ++ ++ + A SRE K YVQ K+ + + +
Sbjct: 197 WLFLGVANSD-SLLYDEEFTSYLKQYPDNFRYDKALSREQKNRSGGKMYVQDKIEEYSDE 255
Query: 498 LWSLLSKEGYLYVCGDAKGMARDVHRTLHTIVQEQENVDSSKAESIVKKFQ 548
++ LL ++Y CG KGM + TL + + + K + K Q
Sbjct: 256 IFKLLDGGAHIYFCG-LKGMMPGIQDTLKKVAERRGESWDQKLAQLKKNKQ 305
>pdb|3LO8|A Chain A, Crystal Structure Of The Oxidized Form Of Ferredoxin:nadp+
Reductase From Maize Root At 1.05 Angstroms
Length = 311
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 104/231 (45%), Gaps = 29/231 (12%)
Query: 336 RYYSISSSPRFAPD---RVHVTC---ALVYGPTPTGR---IHKGVCSTWMKNAIP---LE 383
R YSI+S+ R+ + R C A+ Y P TG+ GVCS ++ N+ P ++
Sbjct: 86 RLYSIAST-RYGDNFDGRTGSLCVRRAVYYDPE-TGKEDPSKNGVCSNFLCNSKPGDKIQ 143
Query: 384 GNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGP-A 442
G I + P +P+ IM+ GTG+APFRG+L+ + G A
Sbjct: 144 LTGPS--GKIMLLPEE-----DPNATHIMIATGTGVAPFRGYLRRMFMEDVPNYRFGGLA 196
Query: 443 LLFFGCRNRRMDFIYEDELNNFEEEGVIS-ELILAFSREGSQ----KEYVQHKMMDKAAQ 497
LF G N +Y++E ++ ++ + A SRE K YVQ K+ + + +
Sbjct: 197 WLFLGVANSD-SLLYDEEFTSYLKQYPDNFRYDKALSREQKNRSGGKMYVQDKIEEYSDE 255
Query: 498 LWSLLSKEGYLYVCGDAKGMARDVHRTLHTIVQEQENVDSSKAESIVKKFQ 548
++ LL ++Y CG KGM + TL + + + K + K Q
Sbjct: 256 IFKLLDGGAHIYFCG-LKGMMPGIQDTLKKVAERRGESWDQKLAQLKKNKQ 305
>pdb|1W35|A Chain A, Ferredoxin-Nadp+ Reductase (Mutation: Y 303 W)
pdb|1W87|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 W) Complexed
With Nadp By Cocrystallization
pdb|1W87|B Chain B, Ferredoxin-Nadp Reductase (Mutation: Y 303 W) Complexed
With Nadp By Cocrystallization
Length = 304
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 114/256 (44%), Gaps = 31/256 (12%)
Query: 322 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 373
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 61 IGIIPPGVDKNGKPEKLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 119
Query: 374 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALK 433
T++ + P G+ P+ LP +P +IM+ GTG+AP R +L
Sbjct: 120 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDA 174
Query: 434 QDGAQ-----LGPALLFFGCRNRRMDFIYEDELNNFEEEGVIS-ELILAFSREGSQ---- 483
+ A G + L FG + +Y++EL +++ + L A SRE
Sbjct: 175 ERAANPEYQFKGFSWLVFGVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGG 233
Query: 484 KEYVQHKMMDKAAQLWSLL-SKEGYLYVCGDAKGMARDVHRTLHTIVQEQENVDSSKAES 542
+ Y+Q ++ + A QLW L+ +++ + Y+CG +GM + L +E V S +
Sbjct: 234 RMYIQDRVAEHADQLWQLIKNQKTHTYICG-LRGMEEGIDAALSA-AAAKEGVTWSDYQK 291
Query: 543 IVKKFQMEGRYLRDVW 558
+KK GR+ + W
Sbjct: 292 DLKK---AGRWHVETW 304
>pdb|1GO2|A Chain A, Structure Of Ferredoxin-nadp+ Reductase With Lys 72
Replaced By Glu (k72e)
Length = 304
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 27/219 (12%)
Query: 322 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 373
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 61 IGIIPPGVDKNGEPEKLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 119
Query: 374 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALK 433
T++ + P G+ P+ LP +P +IM+ GTG+AP R +L
Sbjct: 120 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDA 174
Query: 434 QDGAQ-----LGPALLFFGCRNRRMDFIYEDELNNFEEEGVIS-ELILAFSREGSQKE-- 485
+ A G + L FG + +Y++EL +++ + L A SRE +
Sbjct: 175 ERAANPEYQFKGFSWLVFGVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGG 233
Query: 486 --YVQHKMMDKAAQLWSLL-SKEGYLYVCGDAKGMARDV 521
Y+Q ++ + A QLW L+ +++ + Y+CG +GM +
Sbjct: 234 RMYIQDRVAEHADQLWQLIKNQKTHTYICG-LRGMEEGI 271
>pdb|1QGY|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Glu (K75e)
Length = 295
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 27/219 (12%)
Query: 322 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 373
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 52 IGIIPPGVDKNGKPEELRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 110
Query: 374 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALK 433
T++ + P G+ P+ LP +P +IM+ GTG+AP R +L
Sbjct: 111 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDA 165
Query: 434 QDGAQ-----LGPALLFFGCRNRRMDFIYEDELNNFEEEGVIS-ELILAFSREGSQKE-- 485
+ A G + L FG + +Y++EL +++ + L A SRE +
Sbjct: 166 ERAANPEYQFKGFSWLVFGVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGG 224
Query: 486 --YVQHKMMDKAAQLWSLL-SKEGYLYVCGDAKGMARDV 521
Y+Q ++ + A QLW L+ +++ + Y+CG +GM +
Sbjct: 225 RMYIQDRVAEHADQLWQLIKNQKTHTYICG-LRGMEEGI 262
>pdb|1E64|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Gln (K75q)
Length = 304
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 334 QPRYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCSTWMKNAIPLEGNGDC 388
Q R YSI+S+ R D T +L Y +G GVCST++ + P G+
Sbjct: 76 QLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEP--GSEVK 132
Query: 389 SWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQ-----LGPAL 443
P+ LP +P +IM+ GTG+AP R +L + A G +
Sbjct: 133 ITGPV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSW 189
Query: 444 LFFGCRNRRMDFIYEDELNNFEEEGVIS-ELILAFSREGSQKE----YVQHKMMDKAAQL 498
L FG + +Y++EL +++ + L A SRE + Y+Q ++ + A QL
Sbjct: 190 LVFGVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQL 248
Query: 499 WSLL-SKEGYLYVCGDAKGMARDV 521
W L+ +++ + Y+CG +GM +
Sbjct: 249 WQLIKNQKTHTYICG-LRGMEEGI 271
>pdb|1E63|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Ser (K75s)
Length = 304
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 27/219 (12%)
Query: 322 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 373
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 61 IGIIPPGVDKNGKPESLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 119
Query: 374 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALK 433
T++ + P G+ P+ LP +P +IM+ GTG+AP R +L
Sbjct: 120 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDA 174
Query: 434 QDGAQ-----LGPALLFFGCRNRRMDFIYEDELNNFEEEGVIS-ELILAFSREGSQ---- 483
+ A G + L FG + +Y++EL +++ + L A SRE
Sbjct: 175 ERAANPEYQFKGFSWLVFGVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGG 233
Query: 484 KEYVQHKMMDKAAQLWSLL-SKEGYLYVCGDAKGMARDV 521
+ Y+Q ++ + A QLW L+ +++ + Y+CG +GM +
Sbjct: 234 RMYIQDRVAEHADQLWQLIKNQKTHTYICG-LRGMEEGI 271
>pdb|1GJR|A Chain A, Ferredoxin-Nadp+ Reductase Complexed With Nadp+ By
Cocrystallization
Length = 304
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 27/219 (12%)
Query: 322 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 373
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 61 IGIIPPGVDKNGKPEKLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 119
Query: 374 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALK 433
T++ + P G+ P+ LP +P +IM+ GTG+AP R +L
Sbjct: 120 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDA 174
Query: 434 QDGAQ-----LGPALLFFGCRNRRMDFIYEDELNNFEEEGVIS-ELILAFSREGSQKE-- 485
+ A G + L FG + +Y++EL +++ + L A SRE +
Sbjct: 175 ERAANPEYQFKGFSWLVFGVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGG 233
Query: 486 --YVQHKMMDKAAQLWSLL-SKEGYLYVCGDAKGMARDV 521
Y+Q ++ + A QLW L+ +++ + Y+CG +GM +
Sbjct: 234 RMYIQDRVAEHADQLWQLIKNQKTHTYICG-LRGMEEGI 271
>pdb|1E62|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Arg (K75r)
Length = 304
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 27/219 (12%)
Query: 322 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 373
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 61 IGIIPPGVDKNGKPERLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 119
Query: 374 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALK 433
T++ + P G+ P+ LP +P +IM+ GTG+AP R +L
Sbjct: 120 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDA 174
Query: 434 QDGAQ-----LGPALLFFGCRNRRMDFIYEDELNNFEEEGVIS-ELILAFSREGSQ---- 483
+ A G + L FG + +Y++EL +++ + L A SRE
Sbjct: 175 ERAANPEYQFKGFSWLVFGVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGG 233
Query: 484 KEYVQHKMMDKAAQLWSLL-SKEGYLYVCGDAKGMARDV 521
+ Y+Q ++ + A QLW L+ +++ + Y+CG +GM +
Sbjct: 234 RMYIQDRVAEHADQLWQLIKNQKTHTYICG-LRGMEEGI 271
>pdb|1QUE|A Chain A, X-Ray Structure Of The Ferredoxin:nadp+ Reductase From The
Cyanobacterium Anabaena Pcc 7119 At 1.8 Angstroms
Length = 303
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 27/219 (12%)
Query: 322 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 373
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 60 IGIIPPGVDKNGKPEKLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 118
Query: 374 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALK 433
T++ + P G+ P+ LP +P +IM+ GTG+AP R +L
Sbjct: 119 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDA 173
Query: 434 QDGAQ-----LGPALLFFGCRNRRMDFIYEDELNNFEEEGVIS-ELILAFSREGSQKE-- 485
+ A G + L FG + +Y++EL +++ + L A SRE +
Sbjct: 174 ERAANPEYQFKGFSWLVFGVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGG 232
Query: 486 --YVQHKMMDKAAQLWSLL-SKEGYLYVCGDAKGMARDV 521
Y+Q ++ + A QLW L+ +++ + Y+CG +GM +
Sbjct: 233 RMYIQDRVAEHADQLWQLIKNQKTHTYICG-LRGMEEGI 270
>pdb|1W34|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 S)
Length = 304
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 27/219 (12%)
Query: 322 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 373
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 61 IGIIPPGVDKNGKPEKLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 119
Query: 374 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALK 433
T++ + P G+ P+ LP +P +IM+ GTG+AP R +L
Sbjct: 120 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDA 174
Query: 434 QDGAQ-----LGPALLFFGCRNRRMDFIYEDELNNFEEEGVIS-ELILAFSREGSQKE-- 485
+ A G + L FG + +Y++EL +++ + L A SRE +
Sbjct: 175 ERAANPEYQFKGFSWLVFGVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGG 233
Query: 486 --YVQHKMMDKAAQLWSLL-SKEGYLYVCGDAKGMARDV 521
Y+Q ++ + A QLW L+ +++ + Y+CG +GM +
Sbjct: 234 RMYIQDRVAEHADQLWQLIKNQKTHTYICG-LRGMEEGI 271
>pdb|1OGJ|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 263 Replaced By
Pro (L263p)
Length = 303
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 27/219 (12%)
Query: 322 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 373
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 60 IGIIPPGVDKNGKPEKLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 118
Query: 374 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALK 433
T++ + P G+ P+ LP +P +IM+ GTG+AP R +L
Sbjct: 119 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDA 173
Query: 434 QDGAQ-----LGPALLFFGCRNRRMDFIYEDELNNFEEEGVIS-ELILAFSREGSQKE-- 485
+ A G + L FG + +Y++EL +++ + L A SRE +
Sbjct: 174 ERAANPEYQFKGFSWLVFGVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGG 232
Query: 486 --YVQHKMMDKAAQLWSLL-SKEGYLYVCGDAKGMARDV 521
Y+Q ++ + A QLW L+ +++ + Y+CG +GM +
Sbjct: 233 RMYIQDRVAEHADQLWQLIKNQKTHTYICG-PRGMEEGI 270
>pdb|1GR1|A Chain A, Structure Of Ferredoxin-Nadp+ Reductase With Glu 139
Replaced By Lys (E139k)
Length = 303
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 27/219 (12%)
Query: 322 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 373
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 60 IGIIPPGVDKNGKPEKLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 118
Query: 374 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALK 433
T++ + P G+ P+ LP +P +IM+ GTG+AP R +L
Sbjct: 119 TYLTHIEP--GSEVKITGPV---GKKMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDA 173
Query: 434 QDGAQ-----LGPALLFFGCRNRRMDFIYEDELNNFEEEGVIS-ELILAFSREGSQKE-- 485
+ A G + L FG + +Y++EL +++ + L A SRE +
Sbjct: 174 ERAANPEYQFKGFSWLVFGVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGG 232
Query: 486 --YVQHKMMDKAAQLWSLL-SKEGYLYVCGDAKGMARDV 521
Y+Q ++ + A QLW L+ +++ + Y+CG +GM +
Sbjct: 233 RMYIQDRVAEHADQLWQLIKNQKTHTYICG-LRGMEEGI 270
>pdb|1B2R|A Chain A, Ferredoxin-Nadp+ Reductase (Mutation: E 301 A)
Length = 304
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 27/219 (12%)
Query: 322 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 373
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 61 IGIIPPGVDKNGKPEKLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 119
Query: 374 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALK 433
T++ + P G+ P+ LP +P +IM+ GTG+AP R +L
Sbjct: 120 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDA 174
Query: 434 QDGAQ-----LGPALLFFGCRNRRMDFIYEDELNNFEEEGVIS-ELILAFSREGSQ---- 483
+ A G + L FG + +Y++EL +++ + L A SRE
Sbjct: 175 ERAANPEYQFKGFSWLVFGVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGG 233
Query: 484 KEYVQHKMMDKAAQLWSLL-SKEGYLYVCGDAKGMARDV 521
+ Y+Q ++ + A QLW L+ +++ + Y+CG +GM +
Sbjct: 234 RMYIQDRVAEHADQLWQLIKNQKTHTYICG-LRGMEEGI 271
>pdb|1BJK|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Arg 264 Replaced By
Glu (r264e)
Length = 295
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 322 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 373
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 52 IGIIPPGVDKNGKPEKLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 110
Query: 374 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALK 433
T++ + P G+ P+ LP +P +IM+ GTG+AP R +L
Sbjct: 111 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDA 165
Query: 434 QDGAQ-----LGPALLFFGCRNRRMDFIYEDELNNFEEEGVIS-ELILAFSREGSQKE-- 485
+ A G + L FG + +Y++EL +++ + L A SRE +
Sbjct: 166 ERAANPEYQFKGFSWLVFGVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGG 224
Query: 486 --YVQHKMMDKAAQLWSLL-SKEGYLYVCG 512
Y+Q ++ + A QLW L+ +++ + Y+CG
Sbjct: 225 RMYIQDRVAEHADQLWQLIKNQKTHTYICG 254
>pdb|1H85|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Val 136 Replaced By
Leu (V136l)
Length = 295
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 27/219 (12%)
Query: 322 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 373
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 52 IGIIPPGVDKNGKPEKLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 110
Query: 374 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALK 433
T++ + P G+ P+ LP +P +IM+ GTG+AP R +L
Sbjct: 111 TYLTHIEP--GSEVKITGPL---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDA 165
Query: 434 QDGAQ-----LGPALLFFGCRNRRMDFIYEDELNNFEEEGVIS-ELILAFSREGSQKE-- 485
+ A G + L FG + +Y++EL +++ + L A SRE +
Sbjct: 166 ERAANPEYQFKGFSWLVFGVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGG 224
Query: 486 --YVQHKMMDKAAQLWSLL-SKEGYLYVCGDAKGMARDV 521
Y+Q ++ + A QLW L+ +++ + Y+CG +GM +
Sbjct: 225 RMYIQDRVAEHADQLWQLIKNQKTHTYICG-LRGMEEGI 262
>pdb|2BSA|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 S) Complexed
With Nadp
Length = 303
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 27/219 (12%)
Query: 322 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 373
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 60 IGIIPPGVDKNGKPEKLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGATVYGVCS 118
Query: 374 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALK 433
T++ + P G+ P+ LP +P +IM+ GTG+AP R +L
Sbjct: 119 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDA 173
Query: 434 QDGAQ-----LGPALLFFGCRNRRMDFIYEDELNNFEEEGVIS-ELILAFSREGSQKE-- 485
+ A G + L FG + +Y++EL +++ + L A SRE +
Sbjct: 174 ERAANPEYQFKGFSWLVFGVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGG 232
Query: 486 --YVQHKMMDKAAQLWSLL-SKEGYLYVCGDAKGMARDV 521
Y+Q ++ + A QLW L+ +++ + Y+CG +GM +
Sbjct: 233 RMYIQDRVAEHADQLWQLIKNQKTHTYICG-LRGMEEGI 270
>pdb|1QH0|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 76 Mutated By
Asp And Leu 78 Mutated By Asp
Length = 295
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 27/219 (12%)
Query: 322 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 373
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 52 IGIIPPGVDKNGKPEKDRDYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 110
Query: 374 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALK 433
T++ + P G+ P+ LP +P +IM+ GTG+AP R +L
Sbjct: 111 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDA 165
Query: 434 QDGAQ-----LGPALLFFGCRNRRMDFIYEDELNNFEEEGVIS-ELILAFSREGSQKE-- 485
+ A G + L FG + +Y++EL +++ + L A SRE +
Sbjct: 166 ERAANPEYQFKGFSWLVFGVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGG 224
Query: 486 --YVQHKMMDKAAQLWSLL-SKEGYLYVCGDAKGMARDV 521
Y+Q ++ + A QLW L+ +++ + Y+CG +GM +
Sbjct: 225 RMYIQDRVAEHADQLWQLIKNQKTHTYICG-LRGMEEGI 262
>pdb|1BQE|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By
Gly (T155g)
Length = 295
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 27/219 (12%)
Query: 322 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 373
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 52 IGIIPPGVDKNGKPEKLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 110
Query: 374 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALK 433
T++ + P G+ P+ LP +P +IM+ GTG+AP R +L
Sbjct: 111 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLAGGTGIAPMRTYLWRMFKDA 165
Query: 434 QDGAQ-----LGPALLFFGCRNRRMDFIYEDELNNFEEEGVIS-ELILAFSREGSQKE-- 485
+ A G + L FG + +Y++EL +++ + L A SRE +
Sbjct: 166 ERAANPEYQFKGFSWLVFGVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGG 224
Query: 486 --YVQHKMMDKAAQLWSLL-SKEGYLYVCGDAKGMARDV 521
Y+Q ++ + A QLW L+ +++ + Y+CG +GM +
Sbjct: 225 RMYIQDRVAEHADQLWQLIKNQKTHTYICG-LRGMEEGI 262
>pdb|1QGZ|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 78 Replaced By
Asp (L78d)
Length = 295
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 27/219 (12%)
Query: 322 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 373
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 52 IGIIPPGVDKNGKPEKLRDYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 110
Query: 374 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALK 433
T++ + P G+ P+ LP +P +IM+ GTG+AP R +L
Sbjct: 111 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDA 165
Query: 434 QDGAQ-----LGPALLFFGCRNRRMDFIYEDELNNFEEEGVIS-ELILAFSREGSQKE-- 485
+ A G + L FG + +Y++EL +++ + L A SRE +
Sbjct: 166 ERAANPEYQFKGFSWLVFGVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGG 224
Query: 486 --YVQHKMMDKAAQLWSLL-SKEGYLYVCGDAKGMARDV 521
Y+Q ++ + A QLW L+ +++ + Y+CG +GM +
Sbjct: 225 RMYIQDRVAEHADQLWQLIKNQKTHTYICG-LRGMEEGI 262
>pdb|1EWY|A Chain A, Anabaena Pcc7119 Ferredoxin:ferredoxin-Nadp+-Reductase
Complex
pdb|1EWY|B Chain B, Anabaena Pcc7119 Ferredoxin:ferredoxin-Nadp+-Reductase
Complex
Length = 303
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 27/219 (12%)
Query: 322 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 373
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 60 IGIIPPGVDKNGKPEKLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 118
Query: 374 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALK 433
T++ + P G+ P+ LP +P +IM+ GTG+AP R +L
Sbjct: 119 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDA 173
Query: 434 QDGAQ-----LGPALLFFGCRNRRMDFIYEDELNNFEEEGVIS-ELILAFSREGSQ---- 483
+ A G + L FG + +Y++EL +++ + L A SRE
Sbjct: 174 ERAANPEYQFKGFSWLVFGVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGG 232
Query: 484 KEYVQHKMMDKAAQLWSLL-SKEGYLYVCGDAKGMARDV 521
+ Y+Q ++ + A +LW L+ +++ + Y+CG +GM +
Sbjct: 233 RMYIQDRVAEHADELWQLIKNQKTHTYICG-LRGMEEGI 270
>pdb|2X3U|A Chain A, Ferredoxin-Nadp Reductase Mutant With Tyr 303 Replaced By
Phe (Y303f)
Length = 303
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 27/219 (12%)
Query: 322 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 373
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 60 IGIIPPGVDKNGKPEKLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 118
Query: 374 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALK 433
T++ + P G+ P+ LP +P +IM+ GTG+AP R +L
Sbjct: 119 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDA 173
Query: 434 QDGAQ-----LGPALLFFGCRNRRMDFIYEDELNNFEEEGVIS-ELILAFSREGSQ---- 483
+ A G + L FG + +Y++EL +++ + L A SRE
Sbjct: 174 ERAANPEYQFKGFSWLVFGVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGG 232
Query: 484 KEYVQHKMMDKAAQLWSLL-SKEGYLYVCGDAKGMARDV 521
+ Y+Q ++ + A +LW L+ +++ + Y+CG +GM +
Sbjct: 233 RMYIQDRVAEHADELWQLIKNQKTHTYICG-LRGMEEGI 270
>pdb|1OGI|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By
Gly And Ala 160 Replaced By Thr (T155g-A160t)
Length = 303
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 99/219 (45%), Gaps = 27/219 (12%)
Query: 322 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 373
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 60 IGIIPPGVDKNGKPEKLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 118
Query: 374 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALK 433
T++ + P G+ P+ LP +P +IM+ GTG+ P R +L
Sbjct: 119 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLAGGTGITPMRTYLWRMFKDA 173
Query: 434 QDGAQ-----LGPALLFFGCRNRRMDFIYEDELNNFEEEGVIS-ELILAFSREGSQKE-- 485
+ A G + L FG + +Y++EL +++ + L A SRE +
Sbjct: 174 ERAANPEYQFKGFSWLVFGVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGG 232
Query: 486 --YVQHKMMDKAAQLWSLL-SKEGYLYVCGDAKGMARDV 521
Y+Q ++ + A QLW L+ +++ + Y+CG +GM +
Sbjct: 233 RMYIQDRVAEHADQLWQLIKNQKTHTYICG-LRGMEEGI 270
>pdb|1H42|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By
Gly, Ala 160 Replaced By Thr And Leu 263 Replaced By Pro
(T155g-A160t-L263p)
Length = 304
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 99/219 (45%), Gaps = 27/219 (12%)
Query: 322 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 373
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 61 IGIIPPGVDKNGKPEKLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 119
Query: 374 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALK 433
T++ + P G+ P+ LP +P +IM+ GTG+ P R +L
Sbjct: 120 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLAGGTGITPMRTYLWRMFKDA 174
Query: 434 QDGAQ-----LGPALLFFGCRNRRMDFIYEDELNNFEEEGVIS-ELILAFSREGSQKE-- 485
+ A G + L FG + +Y++EL +++ + L A SRE +
Sbjct: 175 ERAANPEYQFKGFSWLVFGVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGG 233
Query: 486 --YVQHKMMDKAAQLWSLL-SKEGYLYVCGDAKGMARDV 521
Y+Q ++ + A QLW L+ +++ + Y+CG +GM +
Sbjct: 234 RMYIQDRVAEHADQLWQLIKNQKTHTYICG-PRGMEEGI 271
>pdb|2BMW|A Chain A, Ferredoxin: Nadp+reductase Mutant With Thr 155 Replaced By
Gly, Ala 160 Replaced By Thr, Leu 263 Replaced By Pro,
Arg 264 Replaced By Pro And Gly 265 Replaced By Pro
(T155g- A160t-L263p-R264p-G265p)
Length = 304
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 26/210 (12%)
Query: 322 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 373
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 61 IGIIPPGVDKNGKPEKLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 119
Query: 374 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALK 433
T++ + P G+ P+ LP +P +IM+ GTG+ P R +L
Sbjct: 120 TYLTHIEP--GSEVKITGPVG---KEMLLPDDPEANVIMLAGGTGITPMRTYLWRMFKDA 174
Query: 434 QDGAQ-----LGPALLFFGCRNRRMDFIYEDELNNFEEEGVIS-ELILAFSREGSQKE-- 485
+ A G + L FG + +Y++EL +++ + L A SRE +
Sbjct: 175 ERAANPEYQFKGFSWLVFGVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGG 233
Query: 486 --YVQHKMMDKAAQLWSLL-SKEGYLYVCG 512
Y+Q ++ + A QLW L+ +++ + Y+CG
Sbjct: 234 RMYIQDRVAEHADQLWQLIKNQKTHTYICG 263
>pdb|2RC5|A Chain A, Refined Structure Of Fnr From Leptospira Interrogans
pdb|2RC5|B Chain B, Refined Structure Of Fnr From Leptospira Interrogans
pdb|2RC5|C Chain C, Refined Structure Of Fnr From Leptospira Interrogans
pdb|2RC5|D Chain D, Refined Structure Of Fnr From Leptospira Interrogans
pdb|2RC6|A Chain A, Refined Structure Of Fnr From Leptospira Interrogans Bound
To Nadp+
pdb|2RC6|B Chain B, Refined Structure Of Fnr From Leptospira Interrogans Bound
To Nadp+
pdb|2RC6|C Chain C, Refined Structure Of Fnr From Leptospira Interrogans Bound
To Nadp+
pdb|2RC6|D Chain D, Refined Structure Of Fnr From Leptospira Interrogans Bound
To Nadp+
Length = 314
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 74/166 (44%), Gaps = 13/166 (7%)
Query: 369 KGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLP-ANPSVPIIMVGPGTGLAPFRGFLQ 427
KGVCS +M + P G+ P F LP + S I+ + GTG+APF G +
Sbjct: 131 KGVCSNYMCDLKP--GDEVTMTGP---SGKKFLLPNTDFSGDIMFLATGTGIAPFIGMSE 185
Query: 428 ERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVISELILAFSREGSQ---- 483
E + K G L +G + + D L E + +LI A SRE
Sbjct: 186 ELLEHKLI-KFTGNITLVYGAPYSD-ELVMMDYLKGLESKHKNFKLITAISREEKNSFDG 243
Query: 484 -KEYVQHKMMDKAAQLWSLLSKEGYLYVCGDAKGMARDVHRTLHTI 528
+ Y+ H++ ++A + +L+ G Y+CG KGM + V + I
Sbjct: 244 GRMYISHRVREQAEAVKKILNGGGRFYICGGPKGMEKGVIEEIQKI 289
>pdb|2VYQ|A Chain A, Ferredoxin:nadp Reductase Mutant With Thr 155 Replaced By
Gly, Ala 160 Replaced By Thr, Leu 263 Replaced By Pro
And Tyr 303 Replaced By Ser (T155g-A160t-L263p-Y303s)
pdb|2VZL|A Chain A, Ferredoxin-Nadp Reductase (Mutations: T155g, A160t, L263p
And Y303s) Complexed With Nad By Cocrystallization
Length = 304
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 27/219 (12%)
Query: 322 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 373
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 61 IGIIPPGVDKNGKPEKLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 119
Query: 374 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALK 433
T++ + P G+ P+ LP +P +IM+ GTG+ P R +L
Sbjct: 120 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLAGGTGITPMRTYLWRMFKDA 174
Query: 434 QDGAQ-----LGPALLFFGCRNRRMDFIYEDELNNFEEEGVIS-ELILAFSREGSQKE-- 485
+ A G + L FG + +Y++EL +++ + L A SRE +
Sbjct: 175 ERAANPEYQFKGFSWLVFGVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGG 233
Query: 486 --YVQHKMMDKAAQLWSLL-SKEGYLYVCGDAKGMARDV 521
Y+Q ++ + A +LW L+ +++ + Y+CG +GM +
Sbjct: 234 RMYIQDRVAEHADELWQLIKNQKTHTYICG-PRGMEEGI 271
>pdb|1BVY|F Chain F, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 191
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 9/120 (7%)
Query: 7 LRLTCRYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEH-FNKIGIVLD 65
L +T Y +G P DNA +F W + + ++ +++ VFG G++ + + K+ +D
Sbjct: 72 LIVTASY-NGHPPDNAKQFVDWLDQAS--ADEVKGVRYSVFGCGDKNWATTYQKVPAFID 128
Query: 66 EELCKQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELD-----QLLRDEDDANTVSTPY 120
E L +G + G D E + WRE +W ++ + ED+ +T+S +
Sbjct: 129 ETLAAKGAENIADRGEADASDDFEGTYEEWREHMWSDVAAYFNLDIENSEDNKSTLSLQF 188
>pdb|3HR4|A Chain A, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|C Chain C, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|E Chain E, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|G Chain G, Human Inos Reductase And Calmodulin Complex
Length = 219
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 5 IYLRLTCRYGDGEPTDNAARFYK---WFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIG 61
+ L +T +G+G+ N + K E N++ ++ VFGLG+ Y F
Sbjct: 89 LLLVVTSTFGNGDCPGNGEKLKKSLFMLKELNNK------FRYAVFGLGSSMYPRFCAFA 142
Query: 62 IVLDEELCKQGGARLVPLGLGDDDQCIEDDFTAW 95
+D++L G ++L P+G GD+ ED F +W
Sbjct: 143 HDIDQKLSHLGASQLTPMGEGDELSGQEDAFRSW 176
>pdb|1YKG|A Chain A, Solution Structure Of The Flavodoxin-Like Domain From The
Escherichia Coli Sulfite Reductase
Length = 167
Score = 45.8 bits (107), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 9 LTCRYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEEL 68
+T G+GEP + A +K+ + + P L+ F VF LG+ YE F + G D +L
Sbjct: 63 VTSTQGEGEPPEEAVALHKFLF--SKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKL 120
Query: 69 CKQGGARLVPLGLGDDDQCIEDDFTAWRELV 99
+ GG RL L D D + + WR V
Sbjct: 121 AELGGERL--LDRVDADVEYQAAASEWRARV 149
>pdb|3JQQ|A Chain A, Crystal Structure Of The H286k Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum In Complex With
2'p- Amp
pdb|3JQQ|B Chain B, Crystal Structure Of The H286k Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum In Complex With
2'p- Amp
pdb|3JQQ|C Chain C, Crystal Structure Of The H286k Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum In Complex With
2'p- Amp
pdb|3JQQ|D Chain D, Crystal Structure Of The H286k Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum In Complex With
2'p- Amp
pdb|3JQQ|E Chain E, Crystal Structure Of The H286k Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum In Complex With
2'p- Amp
pdb|3JQQ|F Chain F, Crystal Structure Of The H286k Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum In Complex With
2'p- Amp
Length = 316
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 95/228 (41%), Gaps = 37/228 (16%)
Query: 336 RYYSISSSPRF----APDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWA 391
R YSISSS ++H P T G CS ++KN L+ N D
Sbjct: 101 RLYSISSSNNMENLSVAIKIHKYEQTENAPNITNY---GYCSGFIKN---LKINDD---- 150
Query: 392 PIFIRPSN--FKLPAN---PSVPIIMVGPGTGLAPFRGFLQERMA------LKQDGAQLG 440
I++ ++ F LP + + I + GTG++P+ FL++ A ++ G
Sbjct: 151 -IYLTGAHGYFNLPNDAIQKNTNFIFIATGTGISPYISFLKKLFAYDKNNLYNRNSNYTG 209
Query: 441 PALLFFGCRNRRMDFIYEDELNNFEE---EGVISELILAFSREGSQKE-YVQHKMMDKAA 496
+++G N +Y +EL F++ + + ++ + YVQ ++ +
Sbjct: 210 YITIYYGVYNED-SILYLNELEYFQKMYPNNINIHYVFSYKQNSDATSFYVQDEIYKRKT 268
Query: 497 QLWSLLSK-EGYLYVCGDAKGMARDVHRTLHTIVQEQENVDSSKAESI 543
+ +L + + LY+CG + + + I++ + D K + +
Sbjct: 269 EFLNLFNNYKCELYICG-----KKSIRYKVMDILKSHDQFDEKKKKRV 311
>pdb|2OK7|A Chain A, Ferredoxin-Nadp+ Reductase From Plasmodium Falciparum With
2'p-Amp
pdb|2OK7|B Chain B, Ferredoxin-Nadp+ Reductase From Plasmodium Falciparum With
2'p-Amp
pdb|2OK7|C Chain C, Ferredoxin-Nadp+ Reductase From Plasmodium Falciparum With
2'p-Amp
pdb|2OK7|D Chain D, Ferredoxin-Nadp+ Reductase From Plasmodium Falciparum With
2'p-Amp
pdb|2OK7|E Chain E, Ferredoxin-Nadp+ Reductase From Plasmodium Falciparum With
2'p-Amp
pdb|2OK7|F Chain F, Ferredoxin-Nadp+ Reductase From Plasmodium Falciparum With
2'p-Amp
pdb|2OK8|A Chain A, Ferredoxin-nadp+ Reductase From Plasmodium Falciparum
pdb|2OK8|B Chain B, Ferredoxin-nadp+ Reductase From Plasmodium Falciparum
pdb|2OK8|C Chain C, Ferredoxin-nadp+ Reductase From Plasmodium Falciparum
pdb|2OK8|D Chain D, Ferredoxin-nadp+ Reductase From Plasmodium Falciparum
Length = 316
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 95/228 (41%), Gaps = 37/228 (16%)
Query: 336 RYYSISSSPRF----APDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWA 391
R YSISSS ++H P T G CS ++KN L+ N D
Sbjct: 101 RLYSISSSNNMENLSVAIKIHKYEQTENAPNITNY---GYCSGFIKN---LKINDD---- 150
Query: 392 PIFIRPSN--FKLPAN---PSVPIIMVGPGTGLAPFRGFLQERMA------LKQDGAQLG 440
I++ ++ F LP + + I + GTG++P+ FL++ A ++ G
Sbjct: 151 -IYLTGAHGYFNLPNDAIQKNTNFIFIATGTGISPYISFLKKLFAYDKNNLYNRNSNYTG 209
Query: 441 PALLFFGCRNRRMDFIYEDELNNFEE---EGVISELILAFSREGSQKE-YVQHKMMDKAA 496
+++G N +Y +EL F++ + + ++ + YVQ ++ +
Sbjct: 210 YITIYYGVYNED-SILYLNELEYFQKMYPNNINIHYVFSYKQNSDATSFYVQDEIYKRKT 268
Query: 497 QLWSLLSK-EGYLYVCGDAKGMARDVHRTLHTIVQEQENVDSSKAESI 543
+ +L + + LY+CG + + + I++ + D K + +
Sbjct: 269 EFLNLFNNYKCELYICG-----HKSIRYKVMDILKSHDQFDEKKKKRV 311
>pdb|3JQP|A Chain A, Crystal Structure Of The H286l Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum With 2'p-Amp
pdb|3JQP|B Chain B, Crystal Structure Of The H286l Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum With 2'p-Amp
pdb|3JQP|C Chain C, Crystal Structure Of The H286l Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum With 2'p-Amp
pdb|3JQP|D Chain D, Crystal Structure Of The H286l Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum With 2'p-Amp
pdb|3JQP|E Chain E, Crystal Structure Of The H286l Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum With 2'p-Amp
pdb|3JQP|F Chain F, Crystal Structure Of The H286l Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum With 2'p-Amp
pdb|3JQR|A Chain A, Crystal Structure Of The H286l Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum
Length = 316
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 95/228 (41%), Gaps = 37/228 (16%)
Query: 336 RYYSISSSPRF----APDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWA 391
R YSISSS ++H P T G CS ++KN L+ N D
Sbjct: 101 RLYSISSSNNMENLSVAIKIHKYEQTENAPNITNY---GYCSGFIKN---LKINDD---- 150
Query: 392 PIFIRPSN--FKLPAN---PSVPIIMVGPGTGLAPFRGFLQERMA------LKQDGAQLG 440
I++ ++ F LP + + I + GTG++P+ FL++ A ++ G
Sbjct: 151 -IYLTGAHGYFNLPNDAIQKNTNFIFIATGTGISPYISFLKKLFAYDKNNLYNRNSNYTG 209
Query: 441 PALLFFGCRNRRMDFIYEDELNNFEE---EGVISELILAFSREGSQKE-YVQHKMMDKAA 496
+++G N +Y +EL F++ + + ++ + YVQ ++ +
Sbjct: 210 YITIYYGVYNED-SILYLNELEYFQKMYPNNINIHYVFSYKQNSDATSFYVQDEIYKRKT 268
Query: 497 QLWSLLSK-EGYLYVCGDAKGMARDVHRTLHTIVQEQENVDSSKAESI 543
+ +L + + LY+CG + + + I++ + D K + +
Sbjct: 269 EFLNLFNNYKCELYICG-----LKSIRYKVMDILKSHDQFDEKKKKRV 311
>pdb|2HNA|A Chain A, Solution Structure Of A Bacterial Apo-Flavodoxin
pdb|2HNB|A Chain A, Solution Structure Of A Bacterial Holo-Flavodoxin
Length = 147
Score = 39.3 bits (90), Expect = 0.006, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYLRLTCRYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVL 64
I+L ++ +G G+ DN + FY+ E + P L ++FG G+G+R+Y+ F L
Sbjct: 49 IWLVISSTHGAGDIPDNLSPFYEALQE---QKPDLSAVRFGAIGIGSREYDTFCGAIDKL 105
Query: 65 DEELCKQGGAR 75
+ EL K GA+
Sbjct: 106 EAEL-KNSGAK 115
>pdb|1KRH|A Chain A, X-Ray Stucture Of Benzoate Dioxygenase Reductase
pdb|1KRH|B Chain B, X-Ray Stucture Of Benzoate Dioxygenase Reductase
Length = 338
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 409 PIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEE 467
P++M+ GTG+APF LQ L+Q G++ P L FG + D + ++L+ +++
Sbjct: 212 PVLMLAGGTGIAPFLSMLQ---VLEQKGSE-HPVRLVFGV-TQDCDLVALEQLDALQQK 265
>pdb|3NVM|A Chain A, Structural Basis For Substrate Placement By An Archaeal
Box CD Ribonucleoprotein Particle
Length = 371
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Query: 49 LGNRQYEHFNKIGIVLDE-ELCKQGGAR----LVPLGLGDDDQCIEDDFTAWRELVWPEL 103
LG +E + K+G+ L + +Q GAR + + DD + W L +PEL
Sbjct: 110 LGENWFEEYYKVGVALTRMRIQEQSGARDKMVIQAIEALDDINLLVARLREWYSLHFPEL 169
Query: 104 DQLL 107
D+LL
Sbjct: 170 DELL 173
>pdb|1WSB|A Chain A, Flavodoxin Mutant- S64c
pdb|1WSW|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin
Mutant S64c, Dimer, Semiquinone State
pdb|1XYV|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin
Mutant S64c, Monomer, Semiquinone State
pdb|1XYY|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin
Mutant S64c, Homodimer, Oxidised State
Length = 148
Score = 29.6 bits (65), Expect = 4.5, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 40 QQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGL--GDDDQCIEDDFTAW 95
Q K FG G+ YE+F ++E+L K GA +V GL D + DD W
Sbjct: 84 QGRKVACFGCGDSSYEYFCGAVDAIEEKL-KNLGAEIVQDGLRIDGDPRAARDDIVGW 140
>pdb|1J9G|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin D.
Vulgaris S64c Mutant, Monomer Oxidised, At 2.4 Angstrom
Resolution
Length = 147
Score = 29.6 bits (65), Expect = 4.7, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 40 QQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGL--GDDDQCIEDDFTAW 95
Q K FG G+ YE+F ++E+L K GA +V GL D + DD W
Sbjct: 83 QGRKVACFGCGDSSYEYFCGAVDAIEEKL-KNLGAEIVQDGLRIDGDPRAARDDIVGW 139
>pdb|1J9E|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin D.
Vulgaris S35c Mutant At 1.44 Angstrom Resolution
pdb|1XT6|A Chain A, S35c Flavodoxin Mutant In The Semiquinone State
Length = 147
Score = 29.6 bits (65), Expect = 4.7, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 40 QQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGL--GDDDQCIEDDFTAW 95
Q K FG G+ YE+F ++E+L K GA +V GL D + DD W
Sbjct: 83 QGRKVACFGCGDSSYEYFCGAVDAIEEKL-KNLGAEIVQDGLRIDGDPRAARDDIVGW 139
>pdb|1J8Q|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin D.
Vulgaris Wild-Type At 1.35 Angstrom Resolution
pdb|2FX2|A Chain A, Comparison Of The Crystal Structures Of A Flavodoxin In
Its Three Oxidation States At Cryogenic Temperatures
pdb|3FX2|A Chain A, Comparison Of The Crystal Structures Of A Flavodoxin In
Its Three Oxidation States At Cryogenic Temperatures
pdb|4FX2|A Chain A, Comparison Of The Crystal Structures Of A Flavodoxin In
Its Three Oxidation States At Cryogenic Temperatures
pdb|5FX2|A Chain A, Comparison Of The Crystal Structures Of A Flavodoxin In
Its Three Oxidation States At Cryogenic Temperatures
Length = 147
Score = 29.6 bits (65), Expect = 4.9, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 40 QQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGL--GDDDQCIEDDFTAW 95
Q K FG G+ YE+F ++E+L K GA +V GL D + DD W
Sbjct: 83 QGRKVACFGCGDSSYEYFCGAVDAIEEKL-KNLGAEIVQDGLRIDGDPRAARDDIVGW 139
>pdb|1FX1|A Chain A, A Crystallographic Structural Study Of The Oxidation
States Of Desulfovibrio Vulgaris Flavodoxin
Length = 148
Score = 29.6 bits (65), Expect = 5.1, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 40 QQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGL--GDDDQCIEDDFTAW 95
Q K FG G+ YE+F ++E+L K GA +V GL D + DD W
Sbjct: 84 QGRKVACFGCGDSSYEYFCGAVDAIEEKL-KNLGAEIVQDGLRIDGDPRAARDDIVGW 140
>pdb|1AKW|A Chain A, G61l Oxidized Flavodoxin Mutant
Length = 147
Score = 29.3 bits (64), Expect = 5.3, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 40 QQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGL--GDDDQCIEDDFTAW 95
Q K FG G+ YE+F ++E+L K GA +V GL D + DD W
Sbjct: 83 QGRKVACFGCGDSSYEYFCGAVDAIEEKL-KNLGAEIVQDGLRIDGDPRAARDDIVGW 139
>pdb|1AZL|A Chain A, G61v Flavodoxin Mutant From Desulfovibrio Vulgaris
Length = 147
Score = 29.3 bits (64), Expect = 5.4, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 40 QQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGL--GDDDQCIEDDFTAW 95
Q K FG G+ YE+F ++E+L K GA +V GL D + DD W
Sbjct: 83 QGRKVACFGCGDSSYEYFCGAVDAIEEKL-KNLGAEIVQDGLRIDGDPRAARDDIVGW 139
>pdb|1AKT|A Chain A, G61n Oxidized Flavodoxin Mutant
Length = 147
Score = 29.3 bits (64), Expect = 5.4, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 40 QQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGL--GDDDQCIEDDFTAW 95
Q K FG G+ YE+F ++E+L K GA +V GL D + DD W
Sbjct: 83 QGRKVACFGCGDSSYEYFCGAVDAIEEKL-KNLGAEIVQDGLRIDGDPRAARDDIVGW 139
>pdb|1AKR|A Chain A, G61a Oxidized Flavodoxin Mutant
Length = 147
Score = 29.3 bits (64), Expect = 5.4, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 40 QQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGL--GDDDQCIEDDFTAW 95
Q K FG G+ YE+F ++E+L K GA +V GL D + DD W
Sbjct: 83 QGRKVACFGCGDSSYEYFCGAVDAIEEKL-KNLGAEIVQDGLRIDGDPRAARDDIVGW 139
>pdb|1BU5|A Chain A, X-Ray Crystal Structure Of The Desulfovibrio Vulgaris
(Hildenborough) Apoflavodoxin-Riboflavin Complex
pdb|1BU5|B Chain B, X-Ray Crystal Structure Of The Desulfovibrio Vulgaris
(Hildenborough) Apoflavodoxin-Riboflavin Complex
Length = 147
Score = 29.3 bits (64), Expect = 5.5, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 40 QQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGL--GDDDQCIEDDFTAW 95
Q K FG G+ YE+F ++E+L K GA +V GL D + DD W
Sbjct: 83 QGRKVACFGCGDSSYEYFCGAVDAIEEKL-KNLGAEIVQDGLRIDGDPRAARDDIVGW 139
>pdb|1C7E|A Chain A, D95e Hydroquinone Flavodoxin Mutant From D. Vulgaris
pdb|1C7E|B Chain B, D95e Hydroquinone Flavodoxin Mutant From D. Vulgaris
pdb|1C7F|A Chain A, D95e Oxidized Flavodoxin Mutant From D. Vulgaris
pdb|1C7F|B Chain B, D95e Oxidized Flavodoxin Mutant From D. Vulgaris
Length = 147
Score = 28.9 bits (63), Expect = 8.6, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Query: 40 QQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGL--GDDDQCIEDDFTAW 95
Q K FG G YE+F ++E+L K GA +V GL D + DD W
Sbjct: 83 QGRKVACFGCGESSYEYFCGAVDAIEEKL-KNLGAEIVQDGLRIDGDPRAARDDIVGW 139
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,443,124
Number of Sequences: 62578
Number of extensions: 815025
Number of successful extensions: 1728
Number of sequences better than 100.0: 89
Number of HSP's better than 100.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 1470
Number of HSP's gapped (non-prelim): 124
length of query: 558
length of database: 14,973,337
effective HSP length: 104
effective length of query: 454
effective length of database: 8,465,225
effective search space: 3843212150
effective search space used: 3843212150
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)