BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008650
(558 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 122/318 (38%), Positives = 180/318 (56%), Gaps = 11/318 (3%)
Query: 224 SNKEKHQPLLTCFSYEEISSATNNFHSENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXX 283
+ E H L FS E+ A++NF ++N++G+GG+ +VYKG L+DG +AVKRL
Sbjct: 16 EDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERX 75
Query: 284 XXXXXXXFLMELGIIGHVCHPNTATLVGCCIE-NGLYLIFNFSQNGNLDAALHD--ERSK 340
F E+ +I H N L G C+ L++ + NG++ + L + E
Sbjct: 76 QGGELQ-FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP 134
Query: 341 SLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN 400
L+WP R +I LG ARGL YLH C +IIHRD+KA+N+LL +FE + DFGLAK +
Sbjct: 135 PLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 194
Query: 401 KCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQN---- 456
K H + GT G++APEY G EKTDVF +GV+LLE+ITG++ D +R
Sbjct: 195 K-DXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD 253
Query: 457 --LVLWAKPLMESGNLTELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLEL 514
L+ W K L++ L LVD L+G Y +++ +L+ +A C + + RP MSEV+ +
Sbjct: 254 VMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRM 313
Query: 515 LTSGHDSEFAKSWRMPEF 532
L +E + W+ E
Sbjct: 314 LEGDGLAERWEEWQKEEM 331
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 120/318 (37%), Positives = 178/318 (55%), Gaps = 11/318 (3%)
Query: 224 SNKEKHQPLLTCFSYEEISSATNNFHSENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXX 283
+ E H L FS E+ A++NF ++N++G+GG+ +VYKG L+DG +AVKRL
Sbjct: 8 EDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERT 67
Query: 284 XXXXXXXFLMELGIIGHVCHPNTATLVGCCIE-NGLYLIFNFSQNGNLDAALHD--ERSK 340
F E+ +I H N L G C+ L++ + NG++ + L + E
Sbjct: 68 QGGELQ-FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP 126
Query: 341 SLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN 400
L+WP R +I LG ARGL YLH C +IIHRD+KA+N+LL +FE + DFGLAK +
Sbjct: 127 PLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 186
Query: 401 KCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQN---- 456
K H + G G++APEY G EKTDVF +GV+LLE+ITG++ D +R
Sbjct: 187 K-DXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD 245
Query: 457 --LVLWAKPLMESGNLTELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLEL 514
L+ W K L++ L LVD L+G Y +++ +L+ +A C + + RP MSEV+ +
Sbjct: 246 VMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRM 305
Query: 515 LTSGHDSEFAKSWRMPEF 532
L +E + W+ E
Sbjct: 306 LEGDGLAERWEEWQKEEM 323
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 182 bits (461), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 106/280 (37%), Positives = 159/280 (56%), Gaps = 12/280 (4%)
Query: 240 EISSATNNFHSENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIG 299
++ ATNNF + ++G G + +VYKG L DG K+A+KR F E+ +
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR--RTPESSQGIEEFETEIETLS 90
Query: 300 HVCHPNTATLVGCCIE-NGLYLIFNFSQNGNLDAALH--DERSKSLEWPIRYKIVLGVAR 356
HP+ +L+G C E N + LI+ + +NGNL L+ D + S+ W R +I +G AR
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 357 GLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGY 416
GLHYLH R IIHRD+K+ N+LL +F P+ITDFG++K H ++GT GY
Sbjct: 151 GLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGY 207
Query: 417 LAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSS----RQNLVLWAKPLMESGNLTE 472
+ PEYF+ G + EK+DV++FGV+L E++ R + S NL WA +G L +
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQ 267
Query: 473 LVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVL 512
+VDP+L + + + + A C+ +S RPSM +VL
Sbjct: 268 IVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 181 bits (460), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 106/280 (37%), Positives = 159/280 (56%), Gaps = 12/280 (4%)
Query: 240 EISSATNNFHSENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIG 299
++ ATNNF + ++G G + +VYKG L DG K+A+KR F E+ +
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR--RTPESSQGIEEFETEIETLS 90
Query: 300 HVCHPNTATLVGCCIE-NGLYLIFNFSQNGNLDAALH--DERSKSLEWPIRYKIVLGVAR 356
HP+ +L+G C E N + LI+ + +NGNL L+ D + S+ W R +I +G AR
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 357 GLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGY 416
GLHYLH R IIHRD+K+ N+LL +F P+ITDFG++K H ++GT GY
Sbjct: 151 GLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGY 207
Query: 417 LAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSS----RQNLVLWAKPLMESGNLTE 472
+ PEYF+ G + EK+DV++FGV+L E++ R + S NL WA +G L +
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQ 267
Query: 473 LVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVL 512
+VDP+L + + + + A C+ +S RPSM +VL
Sbjct: 268 IVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 150/293 (51%), Gaps = 19/293 (6%)
Query: 236 FSYEEISSATNNFHSE------NMVGQGGYSEVYKGNLSDGRKIAVKRLXXXX--XXXXX 287
FS+ E+ + TNNF N +G+GG+ VYKG +++ +AVK+L
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 73
Query: 288 XXXFLMELGIIGHVCHPNTATLVGCCIE-NGLYLIFNFSQNGNL-DAALHDERSKSLEWP 345
F E+ ++ H N L+G + + L L++ + NG+L D + + L W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 346 IRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHH 405
+R KI G A G+++LH+ IHRDIK++N+LL F +I+DFGLA+
Sbjct: 134 MRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 406 AAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLW---AK 462
I GT Y+APE + G I K+D+++FGV+LLEIITG VD R+ +L +
Sbjct: 191 MXXRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEE 249
Query: 463 PLMESGNLTELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELL 515
E + + +D + + D+ + + +A C+ + RP + +V +LL
Sbjct: 250 IEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 150/293 (51%), Gaps = 19/293 (6%)
Query: 236 FSYEEISSATNNFHSE------NMVGQGGYSEVYKGNLSDGRKIAVKRLXXXX--XXXXX 287
FS+ E+ + TNNF N +G+GG+ VYKG +++ +AVK+L
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 67
Query: 288 XXXFLMELGIIGHVCHPNTATLVGCCIE-NGLYLIFNFSQNGNL-DAALHDERSKSLEWP 345
F E+ ++ H N L+G + + L L++ + NG+L D + + L W
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 127
Query: 346 IRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHH 405
+R KI G A G+++LH+ IHRDIK++N+LL F +I+DFGLA+
Sbjct: 128 MRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 184
Query: 406 AAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLW---AK 462
I GT Y+APE + G I K+D+++FGV+LLEIITG VD R+ +L +
Sbjct: 185 MXXRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEE 243
Query: 463 PLMESGNLTELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELL 515
E + + +D + + D+ + + +A C+ + RP + +V +LL
Sbjct: 244 IEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 295
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 150/293 (51%), Gaps = 19/293 (6%)
Query: 236 FSYEEISSATNNFHSE------NMVGQGGYSEVYKGNLSDGRKIAVKRLXXXX--XXXXX 287
FS+ E+ + TNNF N +G+GG+ VYKG +++ +AVK+L
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 73
Query: 288 XXXFLMELGIIGHVCHPNTATLVGCCIE-NGLYLIFNFSQNGNL-DAALHDERSKSLEWP 345
F E+ ++ H N L+G + + L L++ + NG+L D + + L W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 346 IRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHH 405
+R KI G A G+++LH+ IHRDIK++N+LL F +I+DFGLA+
Sbjct: 134 MRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 406 AAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLW---AK 462
I GT Y+APE + G I K+D+++FGV+LLEIITG VD R+ +L +
Sbjct: 191 MXSRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEE 249
Query: 463 PLMESGNLTELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELL 515
E + + +D + + D+ + + +A C+ + RP + +V +LL
Sbjct: 250 IEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 140/292 (47%), Gaps = 17/292 (5%)
Query: 236 FSYEEISSATNNFHSE------NMVGQGGYSEVYKGNLSDGRKIAVKRLXXXX--XXXXX 287
FS+ E+ + TNNF N G+GG+ VYKG +++ +AVK+L
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 64
Query: 288 XXXFLMELGIIGHVCHPNTATLVGCCIE-NGLYLIFNFSQNGNL-DAALHDERSKSLEWP 345
F E+ + H N L+G + + L L++ + NG+L D + + L W
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 346 IRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHH 405
R KI G A G+++LH+ IHRDIK++N+LL F +I+DFGLA+
Sbjct: 125 XRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 406 AAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLM 465
I GT Y APE + G I K+D+++FGV+LLEIITG VD R+ +L
Sbjct: 182 XXSRIVGTTAYXAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEE 240
Query: 466 ESGNLTELVD--PSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELL 515
+ D + D+ + +A C+ + RP + +V +LL
Sbjct: 241 IEDEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLL 292
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 132/276 (47%), Gaps = 39/276 (14%)
Query: 251 ENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLV 310
E +VG+G + V K + +A+K++ F++EL + V HPN L
Sbjct: 14 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESESERKA----FIVELRQLSRVNHPNIVKLY 68
Query: 311 GCCIENGLYLIFNFSQNGNLDAALHDER-------SKSLEWPIRYKIVLGVARGLHYLHK 363
G C+ N + L+ +++ G+L LH + ++ W L ++G+ YLH
Sbjct: 69 GACL-NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHS 121
Query: 364 GCKRRIIHRDIKASNVLL-GPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF 422
+ +IHRD+K N+LL +I DFG A + T++ +G+ ++APE F
Sbjct: 122 MQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNN-----KGSAAWMAPEVF 176
Query: 423 MHGIIDEKTDVFAFGVLLLEIITGRKPVD--SSRQNLVLWAKPLMESGNLTELVDPSLEG 480
EK DVF++G++L E+IT RKP D ++WA + +G L+ +L
Sbjct: 177 EGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWA---VHNGTRPPLIK-NLPK 232
Query: 481 EYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELLT 516
++ + C + + RPSM E+++++T
Sbjct: 233 PIES--------LMTRCWSKDPSQRPSMEEIVKIMT 260
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 132/276 (47%), Gaps = 39/276 (14%)
Query: 251 ENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLV 310
E +VG+G + V K + +A+K++ F++EL + V HPN L
Sbjct: 13 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESESERKA----FIVELRQLSRVNHPNIVKLY 67
Query: 311 GCCIENGLYLIFNFSQNGNLDAALHDER-------SKSLEWPIRYKIVLGVARGLHYLHK 363
G C+ N + L+ +++ G+L LH + ++ W L ++G+ YLH
Sbjct: 68 GACL-NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHS 120
Query: 364 GCKRRIIHRDIKASNVLL-GPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF 422
+ +IHRD+K N+LL +I DFG A + T++ +G+ ++APE F
Sbjct: 121 MQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNN-----KGSAAWMAPEVF 175
Query: 423 MHGIIDEKTDVFAFGVLLLEIITGRKPVD--SSRQNLVLWAKPLMESGNLTELVDPSLEG 480
EK DVF++G++L E+IT RKP D ++WA + +G L+ +L
Sbjct: 176 EGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWA---VHNGTRPPLIK-NLPK 231
Query: 481 EYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELLT 516
++ + C + + RPSM E+++++T
Sbjct: 232 PIES--------LMTRCWSKDPSQRPSMEEIVKIMT 259
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 27/214 (12%)
Query: 251 ENMVGQGGYSEVYKGNLSDGRKIAVK--RLXXXXXXXXXXXXFLMELGIIGHVCHPNTAT 308
E ++G GG+ +VY+ G ++AVK R E + + HPN
Sbjct: 12 EEIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70
Query: 309 LVGCCI-ENGLYLIFNFSQNGNLDAALHDERSKS---LEWPIRYKIVLGVARGLHYLHKG 364
L G C+ E L L+ F++ G L+ L +R + W ++ +ARG++YLH
Sbjct: 71 LRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQ------IARGMNYLHDE 124
Query: 365 CKRRIIHRDIKASNVLLGPDFEP--------QITDFGLAK-WLPNKCTHHAAIPIEGTFG 415
IIHRD+K+SN+L+ E +ITDFGLA+ W ++ T +A G +
Sbjct: 125 AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW--HRTTKMSA---AGAYA 179
Query: 416 YLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
++APE + + +DV+++GVLL E++TG P
Sbjct: 180 WMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 14/203 (6%)
Query: 251 ENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLV 310
E +GQG + EV+ G + ++A+K L FL E ++ + H L
Sbjct: 272 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLY 328
Query: 311 GCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRII 370
E +Y++ + G+L L E K L P + +A G+ Y+ + +
Sbjct: 329 AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYV 385
Query: 371 HRDIKASNVLLGPDFEPQITDFGLAKWLPNK---CTHHAAIPIEGTFGYLAPEYFMHGII 427
HRD++A+N+L+G + ++ DFGLA+ + + A PI+ T APE ++G
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGRF 441
Query: 428 DEKTDVFAFGVLLLEIIT-GRKP 449
K+DV++FG+LL E+ T GR P
Sbjct: 442 TIKSDVWSFGILLTELTTKGRVP 464
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 14/203 (6%)
Query: 251 ENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLV 310
E +GQG + EV+ G + ++A+K L FL E ++ + H L
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLY 245
Query: 311 GCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRII 370
E +Y++ + G+L L E K L P + +A G+ Y+ + +
Sbjct: 246 AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYV 302
Query: 371 HRDIKASNVLLGPDFEPQITDFGLAKWLPNK---CTHHAAIPIEGTFGYLAPEYFMHGII 427
HRD++A+N+L+G + ++ DFGLA+ + + A PI+ T APE ++G
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGRF 358
Query: 428 DEKTDVFAFGVLLLEIIT-GRKP 449
K+DV++FG+LL E+ T GR P
Sbjct: 359 TIKSDVWSFGILLTELTTKGRVP 381
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 14/203 (6%)
Query: 251 ENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLV 310
E +GQG + EV+ G + ++A+K L FL E ++ + H L
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLY 245
Query: 311 GCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRII 370
E +Y++ + G+L L E K L P + +A G+ Y+ + +
Sbjct: 246 AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYV 302
Query: 371 HRDIKASNVLLGPDFEPQITDFGLAKWLPNK---CTHHAAIPIEGTFGYLAPEYFMHGII 427
HRD++A+N+L+G + ++ DFGLA+ + + A PI+ T APE ++G
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGRF 358
Query: 428 DEKTDVFAFGVLLLEIIT-GRKP 449
K+DV++FG+LL E+ T GR P
Sbjct: 359 TIKSDVWSFGILLTELTTKGRVP 381
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 14/203 (6%)
Query: 251 ENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLV 310
E +GQG + EV+ G + ++A+K L FL E ++ + H L
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLY 79
Query: 311 GCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRII 370
E +Y++ + G+L L E K L P + +A G+ Y+ + +
Sbjct: 80 AVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYV 136
Query: 371 HRDIKASNVLLGPDFEPQITDFGLAKWLPNK---CTHHAAIPIEGTFGYLAPEYFMHGII 427
HRD++A+N+L+G + ++ DFGLA+ + + A PI+ T APE ++G
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWT----APEAALYGRF 192
Query: 428 DEKTDVFAFGVLLLEIIT-GRKP 449
K+DV++FG+LL E+ T GR P
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVP 215
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 14/203 (6%)
Query: 251 ENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLV 310
E +GQG + EV+ G + ++A+K L FL E ++ + H L
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLY 79
Query: 311 GCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRII 370
E +Y++ + G+L L E K L P + +A G+ Y+ + +
Sbjct: 80 AVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYV 136
Query: 371 HRDIKASNVLLGPDFEPQITDFGLAKWLPNK---CTHHAAIPIEGTFGYLAPEYFMHGII 427
HRD++A+N+L+G + ++ DFGLA+ + + A PI+ T APE ++G
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGRF 192
Query: 428 DEKTDVFAFGVLLLEIIT-GRKP 449
K+DV++FG+LL E+ T GR P
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVP 215
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 14/203 (6%)
Query: 251 ENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLV 310
E +GQG + EV+ G + ++A+K L FL E ++ + H L
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKIRHEKLVQLY 79
Query: 311 GCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRII 370
E +Y++ + G+L L E K L P + +A G+ Y+ + +
Sbjct: 80 AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYV 136
Query: 371 HRDIKASNVLLGPDFEPQITDFGLAKWLPNK---CTHHAAIPIEGTFGYLAPEYFMHGII 427
HRD++A+N+L+G + ++ DFGLA+ + + A PI+ T APE ++G
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGRF 192
Query: 428 DEKTDVFAFGVLLLEIIT-GRKP 449
K+DV++FG+LL E+ T GR P
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVP 215
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 129/278 (46%), Gaps = 19/278 (6%)
Query: 247 NFHSENMVGQGGYSEVYKGN-LSDGRKIAVKRLXX-XXXXXXXXXXFLMELGIIGHVCHP 304
NF E +G+G +SEVY+ L DG +A+K++ + E+ ++ + HP
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 305 NTATLVGCCIE-NGLYLIFNFSQNGNLDAALHDERSKSLEWPIR--YKIVLGVARGLHYL 361
N IE N L ++ + G+L + + + P R +K + + L ++
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 362 HKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEY 421
H RR++HRDIK +NV + ++ D GL ++ +K T AA + GT Y++PE
Sbjct: 153 HS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT--AAHSLVGTPYYMSPER 207
Query: 422 FMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEGE 481
+ K+D+++ G LL E+ + P + NL K + + P L +
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDY------PPLPSD 261
Query: 482 YDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELLTSGH 519
+ ++++ +LV + C+ RP ++ V ++ H
Sbjct: 262 HYSEELRQLV---NMCINPDPEKRPDVTYVYDVAKRMH 296
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 14/203 (6%)
Query: 251 ENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLV 310
E +GQG + EV+ G + ++A+K L FL E ++ + H L
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLY 245
Query: 311 GCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRII 370
E +Y++ + G+L L E K L P + +A G+ Y+ + +
Sbjct: 246 AVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYV 302
Query: 371 HRDIKASNVLLGPDFEPQITDFGLAKWLPNK---CTHHAAIPIEGTFGYLAPEYFMHGII 427
HRD++A+N+L+G + ++ DFGLA+ + + A PI+ T APE ++G
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGRF 358
Query: 428 DEKTDVFAFGVLLLEIIT-GRKP 449
K+DV++FG+LL E+ T GR P
Sbjct: 359 TIKSDVWSFGILLTELTTKGRVP 381
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 14/203 (6%)
Query: 251 ENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLV 310
E +GQG + EV+ G + ++A+K L FL E ++ + H L
Sbjct: 16 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLY 72
Query: 311 GCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRII 370
E +Y++ + G+L L E K L P + +A G+ Y+ + +
Sbjct: 73 AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYV 129
Query: 371 HRDIKASNVLLGPDFEPQITDFGLAKWLPNK---CTHHAAIPIEGTFGYLAPEYFMHGII 427
HRD++A+N+L+G + ++ DFGLA+ + + A PI+ T APE ++G
Sbjct: 130 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGRF 185
Query: 428 DEKTDVFAFGVLLLEIIT-GRKP 449
K+DV++FG+LL E+ T GR P
Sbjct: 186 TIKSDVWSFGILLTELTTKGRVP 208
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 14/203 (6%)
Query: 251 ENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLV 310
E +GQG + EV+ G + ++A+K L FL E ++ + H L
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLY 79
Query: 311 GCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRII 370
E +Y++ + G+L L E K L P + +A G+ Y+ + +
Sbjct: 80 AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYV 136
Query: 371 HRDIKASNVLLGPDFEPQITDFGLAKWLPNK---CTHHAAIPIEGTFGYLAPEYFMHGII 427
HRD++A+N+L+G + ++ DFGLA+ + + A PI+ T APE ++G
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGRF 192
Query: 428 DEKTDVFAFGVLLLEIIT-GRKP 449
K+DV++FG+LL E+ T GR P
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVP 215
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 14/203 (6%)
Query: 251 ENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLV 310
E +GQG + EV+ G + ++A+K L FL E ++ + H L
Sbjct: 14 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLY 70
Query: 311 GCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRII 370
E +Y++ + G+L L E K L P + +A G+ Y+ + +
Sbjct: 71 AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYV 127
Query: 371 HRDIKASNVLLGPDFEPQITDFGLAKWLPNK---CTHHAAIPIEGTFGYLAPEYFMHGII 427
HRD++A+N+L+G + ++ DFGLA+ + + A PI+ T APE ++G
Sbjct: 128 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGRF 183
Query: 428 DEKTDVFAFGVLLLEIIT-GRKP 449
K+DV++FG+LL E+ T GR P
Sbjct: 184 TIKSDVWSFGILLTELTTKGRVP 206
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 14/203 (6%)
Query: 251 ENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLV 310
E +GQG + EV+ G + ++A+K L FL E ++ + H L
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLY 79
Query: 311 GCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRII 370
E +Y++ + G+L L E K L P + +A G+ Y+ + +
Sbjct: 80 AVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYV 136
Query: 371 HRDIKASNVLLGPDFEPQITDFGLAKWLPNK---CTHHAAIPIEGTFGYLAPEYFMHGII 427
HRD++A+N+L+G + ++ DFGLA+ + + A PI+ T APE ++G
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGRF 192
Query: 428 DEKTDVFAFGVLLLEIIT-GRKP 449
K+DV++FG+LL E+ T GR P
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVP 215
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 14/203 (6%)
Query: 251 ENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLV 310
E +GQG + EV+ G + ++A+K L FL E ++ + H L
Sbjct: 12 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLY 68
Query: 311 GCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRII 370
E +Y++ + G+L L E K L P + +A G+ Y+ + +
Sbjct: 69 AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYV 125
Query: 371 HRDIKASNVLLGPDFEPQITDFGLAKWLPNK---CTHHAAIPIEGTFGYLAPEYFMHGII 427
HRD++A+N+L+G + ++ DFGLA+ + + A PI+ T APE ++G
Sbjct: 126 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGRF 181
Query: 428 DEKTDVFAFGVLLLEIIT-GRKP 449
K+DV++FG+LL E+ T GR P
Sbjct: 182 TIKSDVWSFGILLTELTTKGRVP 204
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 117/264 (44%), Gaps = 28/264 (10%)
Query: 254 VGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G G Y EVY+G +AVK L FL E ++ + HPN L+G
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLGV 75
Query: 313 CI-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
C E Y+I F GNL L + + + + + ++ + YL K + IH
Sbjct: 76 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIH 132
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLP-NKCTHHAA--IPIEGTFGYLAPEYFMHGIID 428
RD+ A N L+G + ++ DFGL++ + + T HA PI+ T APE +
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT----APESLAYNKFS 188
Query: 429 EKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEGEYDTDQM 487
K+DV+AFGVLL EI T G P P ++ + EL++ E
Sbjct: 189 IKSDVWAFGVLLWEIATYGMSPY------------PGIDPSQVYELLEKDYRMERPEGCP 236
Query: 488 HRLVLIADYCVRQTSAWRPSMSEV 511
++ + C + + RPS +E+
Sbjct: 237 EKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 14/203 (6%)
Query: 251 ENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLV 310
E +GQG + EV+ G + ++A+K L FL E ++ + H L
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLY 79
Query: 311 GCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRII 370
E +Y++ + G L L E K L P + +A G+ Y+ + +
Sbjct: 80 AVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYV 136
Query: 371 HRDIKASNVLLGPDFEPQITDFGLAKWLPNK---CTHHAAIPIEGTFGYLAPEYFMHGII 427
HRD++A+N+L+G + ++ DFGLA+ + + A PI+ T APE ++G
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGRF 192
Query: 428 DEKTDVFAFGVLLLEIIT-GRKP 449
K+DV++FG+LL E+ T GR P
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVP 215
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 14/210 (6%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + EV+ G + K+A+K L FL E I+ + H L
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPES---FLEEAQIMKKLKHDKLVQLYAVV 73
Query: 314 IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRD 373
E +Y++ + G+L L D ++L+ P + VA G+ Y+ + IHRD
Sbjct: 74 SEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER---MNYIHRD 130
Query: 374 IKASNVLLGPDFEPQITDFGLAKWLPNK---CTHHAAIPIEGTFGYLAPEYFMHGIIDEK 430
++++N+L+G +I DFGLA+ + + A PI+ T APE ++G K
Sbjct: 131 LRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWT----APEAALYGRFTIK 186
Query: 431 TDVFAFGVLLLEIIT-GRKPVDSSRQNLVL 459
+DV++FG+LL E++T GR P VL
Sbjct: 187 SDVWSFGILLTELVTKGRVPYPGMNNREVL 216
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 14/203 (6%)
Query: 251 ENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLV 310
E +GQG + EV+ G + ++A+K L FL E ++ + H L
Sbjct: 20 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLY 76
Query: 311 GCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRII 370
E +Y++ + G+L L E K L P + +A G+ Y+ + +
Sbjct: 77 AVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER---MNYV 133
Query: 371 HRDIKASNVLLGPDFEPQITDFGLAKWLPNK---CTHHAAIPIEGTFGYLAPEYFMHGII 427
HRD++A+N+L+G + ++ DFGLA+ + + A PI+ T APE ++G
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGRF 189
Query: 428 DEKTDVFAFGVLLLEIIT-GRKP 449
K+DV++FG+LL E+ T GR P
Sbjct: 190 TIKSDVWSFGILLTELTTKGRVP 212
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 14/203 (6%)
Query: 251 ENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLV 310
E +GQG + EV+ G + ++A+K L FL E ++ + H L
Sbjct: 20 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLY 76
Query: 311 GCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRII 370
E +Y++ + G+L L E K L P + +A G+ Y+ + +
Sbjct: 77 AVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER---MNYV 133
Query: 371 HRDIKASNVLLGPDFEPQITDFGLAKWLPNK---CTHHAAIPIEGTFGYLAPEYFMHGII 427
HRD++A+N+L+G + ++ DFGLA+ + + A PI+ T APE ++G
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWT----APEAALYGRF 189
Query: 428 DEKTDVFAFGVLLLEIIT-GRKP 449
K+DV++FG+LL E+ T GR P
Sbjct: 190 TIKSDVWSFGILLTELTTKGRVP 212
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 124/281 (44%), Gaps = 28/281 (9%)
Query: 237 SYEEISSATNNFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMEL 295
+Y++ + ++ +G G Y EVY+G +AVK L FL E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEA 60
Query: 296 GIIGHVCHPNTATLVGCCI-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGV 354
++ + HPN L+G C E Y+I F GNL L + + + + + +
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 120
Query: 355 ARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLP-NKCTHHAA--IPIE 411
+ + YL K + IHRD+ A N L+G + ++ DFGL++ + + T HA PI+
Sbjct: 121 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 177
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNL 470
T APE + K+DV+AFGVLL EI T G P P ++ +
Sbjct: 178 WT----APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY------------PGIDLSQV 221
Query: 471 TELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEV 511
EL++ E ++ + C + + RPS +E+
Sbjct: 222 YELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 124/281 (44%), Gaps = 28/281 (9%)
Query: 237 SYEEISSATNNFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMEL 295
+Y++ + ++ +G G Y EVY+G +AVK L FL E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEA 65
Query: 296 GIIGHVCHPNTATLVGCCI-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGV 354
++ + HPN L+G C E Y+I F GNL L + + + + + +
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 125
Query: 355 ARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLP-NKCTHHAA--IPIE 411
+ + YL K + IHRD+ A N L+G + ++ DFGL++ + + T HA PI+
Sbjct: 126 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 182
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNL 470
T APE + K+DV+AFGVLL EI T G P P ++ +
Sbjct: 183 WT----APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY------------PGIDLSQV 226
Query: 471 TELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEV 511
EL++ E ++ + C + + RPS +E+
Sbjct: 227 YELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 124/281 (44%), Gaps = 28/281 (9%)
Query: 237 SYEEISSATNNFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMEL 295
+Y++ + ++ +G G Y EVY+G +AVK L FL E
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEA 61
Query: 296 GIIGHVCHPNTATLVGCCI-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGV 354
++ + HPN L+G C E Y+I F GNL L + + + + + +
Sbjct: 62 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 121
Query: 355 ARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLP-NKCTHHAA--IPIE 411
+ + YL K + IHRD+ A N L+G + ++ DFGL++ + + T HA PI+
Sbjct: 122 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK 178
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNL 470
T APE + K+DV+AFGVLL EI T G P P ++ +
Sbjct: 179 WT----APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY------------PGIDLSQV 222
Query: 471 TELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEV 511
EL++ E ++ + C + + RPS +E+
Sbjct: 223 YELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 124/281 (44%), Gaps = 28/281 (9%)
Query: 237 SYEEISSATNNFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMEL 295
+Y++ + ++ +G G Y EVY+G +AVK L FL E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEA 60
Query: 296 GIIGHVCHPNTATLVGCCI-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGV 354
++ + HPN L+G C E Y+I F GNL L + + + + + +
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 120
Query: 355 ARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLP-NKCTHHAA--IPIE 411
+ + YL K + IHRD+ A N L+G + ++ DFGL++ + + T HA PI+
Sbjct: 121 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 177
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNL 470
T APE + K+DV+AFGVLL EI T G P P ++ +
Sbjct: 178 WT----APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY------------PGIDLSQV 221
Query: 471 TELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEV 511
EL++ E ++ + C + + RPS +E+
Sbjct: 222 YELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 124/281 (44%), Gaps = 28/281 (9%)
Query: 237 SYEEISSATNNFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMEL 295
+Y++ + ++ +G G Y EVY+G +AVK L FL E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEA 65
Query: 296 GIIGHVCHPNTATLVGCCI-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGV 354
++ + HPN L+G C E Y+I F GNL L + + + + + +
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 125
Query: 355 ARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLP-NKCTHHAA--IPIE 411
+ + YL K + IHRD+ A N L+G + ++ DFGL++ + + T HA PI+
Sbjct: 126 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 182
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNL 470
T APE + K+DV+AFGVLL EI T G P P ++ +
Sbjct: 183 WT----APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY------------PGIDLSQV 226
Query: 471 TELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEV 511
EL++ E ++ + C + + RPS +E+
Sbjct: 227 YELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 14/203 (6%)
Query: 251 ENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLV 310
E +GQG + EV+ G + ++A+K L FL E ++ + H L
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLY 79
Query: 311 GCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRII 370
E +Y++ + G+L L E K L P + +A G+ Y+ + +
Sbjct: 80 AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYV 136
Query: 371 HRDIKASNVLLGPDFEPQITDFGLAKWLPNK---CTHHAAIPIEGTFGYLAPEYFMHGII 427
HRD+ A+N+L+G + ++ DFGLA+ + + A PI+ T APE ++G
Sbjct: 137 HRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGRF 192
Query: 428 DEKTDVFAFGVLLLEIIT-GRKP 449
K+DV++FG+LL E+ T GR P
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVP 215
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 14/203 (6%)
Query: 251 ENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLV 310
E +GQG + EV+ G + ++A+K L FL E ++ + H L
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLY 79
Query: 311 GCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRII 370
E +Y++ + G L L E K L P + +A G+ Y+ + +
Sbjct: 80 AVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYV 136
Query: 371 HRDIKASNVLLGPDFEPQITDFGLAKWLPNK---CTHHAAIPIEGTFGYLAPEYFMHGII 427
HRD++A+N+L+G + ++ DFGLA+ + + A PI+ T APE ++G
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGRF 192
Query: 428 DEKTDVFAFGVLLLEIIT-GRKP 449
K+DV++FG+LL E+ T GR P
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVP 215
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 14/203 (6%)
Query: 251 ENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLV 310
E +GQG + EV+ G + ++A+K L FL E ++ + H L
Sbjct: 190 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEA---FLQEAQVMKKLRHEKLVQLY 246
Query: 311 GCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRII 370
E +Y++ + G+L L E K L P + +A G+ Y+ + +
Sbjct: 247 AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYV 303
Query: 371 HRDIKASNVLLGPDFEPQITDFGLAKWLPNK---CTHHAAIPIEGTFGYLAPEYFMHGII 427
HRD++A+N+L+G + ++ DFGL + + + A PI+ T APE ++G
Sbjct: 304 HRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWT----APEAALYGRF 359
Query: 428 DEKTDVFAFGVLLLEIIT-GRKP 449
K+DV++FG+LL E+ T GR P
Sbjct: 360 TIKSDVWSFGILLTELTTKGRVP 382
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 117/264 (44%), Gaps = 28/264 (10%)
Query: 254 VGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G G Y EVY+G +AVK L FL E ++ + HPN L+G
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLGV 75
Query: 313 CI-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
C E Y+I F GNL L + + + + + ++ + YL K + IH
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIH 132
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLP-NKCTHHAA--IPIEGTFGYLAPEYFMHGIID 428
RD+ A N L+G + ++ DFGL++ + + T HA PI+ T APE +
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWT----APESLAYNKFS 188
Query: 429 EKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEGEYDTDQM 487
K+DV+AFGVLL EI T G P P ++ + EL++ E
Sbjct: 189 IKSDVWAFGVLLWEIATYGMSPY------------PGIDPSQVYELLEKDYRMERPEGCP 236
Query: 488 HRLVLIADYCVRQTSAWRPSMSEV 511
++ + C + + RPS +E+
Sbjct: 237 EKVYELMRACWQWNPSDRPSFAEI 260
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 124/281 (44%), Gaps = 28/281 (9%)
Query: 237 SYEEISSATNNFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMEL 295
+Y++ + ++ +G G Y EVY+G +AVK L FL E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEA 65
Query: 296 GIIGHVCHPNTATLVGCCI-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGV 354
++ + HPN L+G C E Y+I F GNL L + + + + + +
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 125
Query: 355 ARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLP-NKCTHHAA--IPIE 411
+ + YL K + IHRD+ A N L+G + ++ DFGL++ + + T HA PI+
Sbjct: 126 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 182
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNL 470
T APE + K+DV+AFGVLL EI T G P P ++ +
Sbjct: 183 WT----APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY------------PGIDLSQV 226
Query: 471 TELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEV 511
EL++ E ++ + C + + RPS +E+
Sbjct: 227 YELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 124/281 (44%), Gaps = 28/281 (9%)
Query: 237 SYEEISSATNNFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMEL 295
+Y++ + ++ +G G Y EVY+G +AVK L FL E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEA 65
Query: 296 GIIGHVCHPNTATLVGCCI-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGV 354
++ + HPN L+G C E Y+I F GNL L + + + + + +
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 125
Query: 355 ARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLP-NKCTHHAA--IPIE 411
+ + YL K + IHRD+ A N L+G + ++ DFGL++ + + T HA PI+
Sbjct: 126 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 182
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNL 470
T APE + K+DV+AFGVLL EI T G P P ++ +
Sbjct: 183 WT----APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY------------PGIDLSQV 226
Query: 471 TELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEV 511
EL++ E ++ + C + + RPS +E+
Sbjct: 227 YELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 124/281 (44%), Gaps = 28/281 (9%)
Query: 237 SYEEISSATNNFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMEL 295
+Y++ + ++ +G G Y EVY+G +AVK L FL E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEA 60
Query: 296 GIIGHVCHPNTATLVGCCI-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGV 354
++ + HPN L+G C E Y+I F GNL L + + + + + +
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 120
Query: 355 ARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLP-NKCTHHAA--IPIE 411
+ + YL K + IHRD+ A N L+G + ++ DFGL++ + + T HA PI+
Sbjct: 121 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 177
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNL 470
T APE + K+DV+AFGVLL EI T G P P ++ +
Sbjct: 178 WT----APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY------------PGIDLSQV 221
Query: 471 TELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEV 511
EL++ E ++ + C + + RPS +E+
Sbjct: 222 YELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 124/281 (44%), Gaps = 28/281 (9%)
Query: 237 SYEEISSATNNFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMEL 295
+Y++ + ++ +G G Y EVY+G +AVK L FL E
Sbjct: 17 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEA 73
Query: 296 GIIGHVCHPNTATLVGCCI-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGV 354
++ + HPN L+G C E Y+I F GNL L + + + + + +
Sbjct: 74 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 133
Query: 355 ARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLP-NKCTHHAA--IPIE 411
+ + YL K + IHRD+ A N L+G + ++ DFGL++ + + T HA PI+
Sbjct: 134 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 190
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNL 470
T APE + K+DV+AFGVLL EI T G P P ++ +
Sbjct: 191 WT----APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY------------PGIDLSQV 234
Query: 471 TELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEV 511
EL++ E ++ + C + + RPS +E+
Sbjct: 235 YELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 275
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 124/281 (44%), Gaps = 28/281 (9%)
Query: 237 SYEEISSATNNFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMEL 295
+Y++ + ++ +G G Y EVY+G +AVK L FL E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEA 60
Query: 296 GIIGHVCHPNTATLVGCCI-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGV 354
++ + HPN L+G C E Y+I F GNL L + + + + + +
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 120
Query: 355 ARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLP-NKCTHHAA--IPIE 411
+ + YL K + IHRD+ A N L+G + ++ DFGL++ + + T HA PI+
Sbjct: 121 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 177
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNL 470
T APE + K+DV+AFGVLL EI T G P P ++ +
Sbjct: 178 WT----APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY------------PGIDLSQV 221
Query: 471 TELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEV 511
EL++ E ++ + C + + RPS +E+
Sbjct: 222 YELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 124/281 (44%), Gaps = 28/281 (9%)
Query: 237 SYEEISSATNNFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMEL 295
+Y++ + ++ +G G Y EVY+G +AVK L FL E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEA 65
Query: 296 GIIGHVCHPNTATLVGCCI-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGV 354
++ + HPN L+G C E Y+I F GNL L + + + + + +
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 125
Query: 355 ARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLP-NKCTHHAA--IPIE 411
+ + YL K + IHRD+ A N L+G + ++ DFGL++ + + T HA PI+
Sbjct: 126 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK 182
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNL 470
T APE + K+DV+AFGVLL EI T G P P ++ +
Sbjct: 183 WT----APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY------------PGIDLSQV 226
Query: 471 TELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEV 511
EL++ E ++ + C + + RPS +E+
Sbjct: 227 YELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 124/281 (44%), Gaps = 28/281 (9%)
Query: 237 SYEEISSATNNFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMEL 295
+Y++ + ++ +G G Y EVY+G +AVK L FL E
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEA 62
Query: 296 GIIGHVCHPNTATLVGCCI-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGV 354
++ + HPN L+G C E Y+I F GNL L + + + + + +
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 122
Query: 355 ARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLP-NKCTHHAA--IPIE 411
+ + YL K + IHRD+ A N L+G + ++ DFGL++ + + T HA PI+
Sbjct: 123 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 179
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNL 470
T APE + K+DV+AFGVLL EI T G P P ++ +
Sbjct: 180 WT----APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY------------PGIDLSQV 223
Query: 471 TELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEV 511
EL++ E ++ + C + + RPS +E+
Sbjct: 224 YELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 124/281 (44%), Gaps = 28/281 (9%)
Query: 237 SYEEISSATNNFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMEL 295
+Y++ + ++ +G G Y EVY+G +AVK L FL E
Sbjct: 8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEA 64
Query: 296 GIIGHVCHPNTATLVGCCI-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGV 354
++ + HPN L+G C E Y+I F GNL L + + + + + +
Sbjct: 65 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 124
Query: 355 ARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLP-NKCTHHAA--IPIE 411
+ + YL K + IHRD+ A N L+G + ++ DFGL++ + + T HA PI+
Sbjct: 125 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 181
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNL 470
T APE + K+DV+AFGVLL EI T G P P ++ +
Sbjct: 182 WT----APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY------------PGIDLSQV 225
Query: 471 TELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEV 511
EL++ E ++ + C + + RPS +E+
Sbjct: 226 YELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 266
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 124/281 (44%), Gaps = 28/281 (9%)
Query: 237 SYEEISSATNNFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMEL 295
+Y++ + ++ +G G Y EVY+G +AVK L FL E
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEA 62
Query: 296 GIIGHVCHPNTATLVGCCI-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGV 354
++ + HPN L+G C E Y+I F GNL L + + + + + +
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 122
Query: 355 ARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLP-NKCTHHAA--IPIE 411
+ + YL K + IHRD+ A N L+G + ++ DFGL++ + + T HA PI+
Sbjct: 123 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 179
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNL 470
T APE + K+DV+AFGVLL EI T G P P ++ +
Sbjct: 180 WT----APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY------------PGIDLSQV 223
Query: 471 TELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEV 511
EL++ E ++ + C + + RPS +E+
Sbjct: 224 YELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 124/281 (44%), Gaps = 28/281 (9%)
Query: 237 SYEEISSATNNFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMEL 295
+Y++ + ++ +G G Y EVY+G +AVK L FL E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEA 60
Query: 296 GIIGHVCHPNTATLVGCCI-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGV 354
++ + HPN L+G C E Y+I F GNL L + + + + + +
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 120
Query: 355 ARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLP-NKCTHHAA--IPIE 411
+ + YL K + IHRD+ A N L+G + ++ DFGL++ + + T HA PI+
Sbjct: 121 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 177
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNL 470
T APE + K+DV+AFGVLL EI T G P P ++ +
Sbjct: 178 WT----APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY------------PGIDLSQV 221
Query: 471 TELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEV 511
EL++ E ++ + C + + RPS +E+
Sbjct: 222 YELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 124/281 (44%), Gaps = 28/281 (9%)
Query: 237 SYEEISSATNNFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMEL 295
+Y++ + ++ +G G Y EVY+G +AVK L FL E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEA 60
Query: 296 GIIGHVCHPNTATLVGCCI-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGV 354
++ + HPN L+G C E Y+I F GNL L + + + + + +
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 120
Query: 355 ARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLP-NKCTHHAA--IPIE 411
+ + YL K + IHRD+ A N L+G + ++ DFGL++ + + T HA PI+
Sbjct: 121 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 177
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNL 470
T APE + K+DV+AFGVLL EI T G P P ++ +
Sbjct: 178 WT----APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY------------PGIDLSQV 221
Query: 471 TELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEV 511
EL++ E ++ + C + + RPS +E+
Sbjct: 222 YELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 117/264 (44%), Gaps = 28/264 (10%)
Query: 254 VGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G G + EVY+G +AVK L FL E ++ + HPN L+G
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLGV 75
Query: 313 CI-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
C E Y+I F GNL L + + + + + ++ + YL K + IH
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIH 132
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLP-NKCTHHAA--IPIEGTFGYLAPEYFMHGIID 428
RD+ A N L+G + ++ DFGL++ + + T HA PI+ T APE +
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT----APESLAYNKFS 188
Query: 429 EKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEGEYDTDQM 487
K+DV+AFGVLL EI T G P P ++ + EL++ E
Sbjct: 189 IKSDVWAFGVLLWEIATYGMSPY------------PGIDPSQVYELLEKDYRMERPEGCP 236
Query: 488 HRLVLIADYCVRQTSAWRPSMSEV 511
++ + C + + RPS +E+
Sbjct: 237 EKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 155/325 (47%), Gaps = 42/325 (12%)
Query: 210 SILSSPLRKRNGSLSNKEKHQPLLTCFSYEEISSATNNFHSENMVGQGGYSEVYKGNL-- 267
S +SSPL + + + L+ + I ++ H ++G+G + VY G L
Sbjct: 12 SDISSPLLQNTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLD 71
Query: 268 SDGRKI--AVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCI--ENGLYLIFN 323
+DG+KI AVK L FL E I+ HPN +L+G C+ E ++
Sbjct: 72 NDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP 130
Query: 324 FSQNGNLDAALHDERSKSLEWPIRYKIV---LGVARGLHYLHKGCKRRIIHRDIKASNVL 380
+ ++G+L + +E P ++ L VA+G+ YL ++ +HRD+ A N +
Sbjct: 131 YMKHGDLRNFIRNETHN----PTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCM 183
Query: 381 LGPDFEPQITDFGLAKWLPNK---CTHH---AAIPIEGTFGYLAPEYFMHGIIDEKTDVF 434
L F ++ DFGLA+ + +K H+ A +P++ ++A E K+DV+
Sbjct: 184 LDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK----WMALESLQTQKFTTKSDVW 239
Query: 435 AFGVLLLEIITGRKP--VDSSRQNLVLWAKPLMESGNLTELVDPSLEGEYDTDQMHRLVL 492
+FGVLL E++T P D + ++ ++ L++ L L+ EY D ++ ++L
Sbjct: 240 SFGVLLWELMTRGAPPYPDVNTFDITVY---LLQGRRL-------LQPEYCPDPLYEVML 289
Query: 493 IADYCVRQTSAWRPSMSEVLELLTS 517
C + RPS SE++ +++
Sbjct: 290 ---KCWHPKAEMRPSFSELVSRISA 311
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 121/278 (43%), Gaps = 22/278 (7%)
Query: 237 SYEEISSATNNFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMEL 295
+Y++ + ++ +G G Y EVY+G +AVK L FL E
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEA 61
Query: 296 GIIGHVCHPNTATLVGCCI-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGV 354
++ + HPN L+G C E Y+I F GNL L + + + + + +
Sbjct: 62 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 121
Query: 355 ARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTF 414
+ + YL K + IHRD+ A N L+G + ++ DFGL++ L T+ A +
Sbjct: 122 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAPAGAKFPI 177
Query: 415 GYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNLTEL 473
+ APE + K+DV+AFGVLL EI T G P P ++ + EL
Sbjct: 178 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY------------PGIDLSQVYEL 225
Query: 474 VDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEV 511
++ E ++ + C + + RPS +E+
Sbjct: 226 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 121/278 (43%), Gaps = 22/278 (7%)
Query: 237 SYEEISSATNNFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMEL 295
+Y++ + ++ +G G Y EVY+G +AVK L FL E
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEA 62
Query: 296 GIIGHVCHPNTATLVGCCI-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGV 354
++ + HPN L+G C E Y+I F GNL L + + + + + +
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 122
Query: 355 ARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTF 414
+ + YL K + IHRD+ A N L+G + ++ DFGL++ L T+ A +
Sbjct: 123 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAPAGAKFPI 178
Query: 415 GYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNLTEL 473
+ APE + K+DV+AFGVLL EI T G P P ++ + EL
Sbjct: 179 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY------------PGIDLSQVYEL 226
Query: 474 VDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEV 511
++ E ++ + C + + RPS +E+
Sbjct: 227 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 154/323 (47%), Gaps = 42/323 (13%)
Query: 212 LSSPLRKRNGSLSNKEKHQPLLTCFSYEEISSATNNFHSENMVGQGGYSEVYKGNL--SD 269
+SSPL + + + L+ + I ++ H ++G+G + VY G L +D
Sbjct: 15 ISSPLLQNTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDND 74
Query: 270 GRKI--AVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCI--ENGLYLIFNFS 325
G+KI AVK L FL E I+ HPN +L+G C+ E ++ +
Sbjct: 75 GKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 133
Query: 326 QNGNLDAALHDERSKSLEWPIRYKIV---LGVARGLHYLHKGCKRRIIHRDIKASNVLLG 382
++G+L + +E P ++ L VA+G+ YL ++ +HRD+ A N +L
Sbjct: 134 KHGDLRNFIRNETHN----PTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLD 186
Query: 383 PDFEPQITDFGLAKWLPNK---CTHH---AAIPIEGTFGYLAPEYFMHGIIDEKTDVFAF 436
F ++ DFGLA+ + +K H+ A +P++ ++A E K+DV++F
Sbjct: 187 EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK----WMALESLQTQKFTTKSDVWSF 242
Query: 437 GVLLLEIITGRKP--VDSSRQNLVLWAKPLMESGNLTELVDPSLEGEYDTDQMHRLVLIA 494
GVLL E++T P D + ++ ++ L++ L L+ EY D ++ ++L
Sbjct: 243 GVLLWELMTRGAPPYPDVNTFDITVY---LLQGRRL-------LQPEYCPDPLYEVML-- 290
Query: 495 DYCVRQTSAWRPSMSEVLELLTS 517
C + RPS SE++ +++
Sbjct: 291 -KCWHPKAEMRPSFSELVSRISA 312
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 14/203 (6%)
Query: 251 ENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLV 310
E +GQG + EV+ G + ++A+K L FL E ++ + H L
Sbjct: 13 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLY 69
Query: 311 GCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRII 370
E + ++ + G+L L E K L P + +A G+ Y+ + +
Sbjct: 70 AVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYV 126
Query: 371 HRDIKASNVLLGPDFEPQITDFGLAKWLPNK---CTHHAAIPIEGTFGYLAPEYFMHGII 427
HRD++A+N+L+G + ++ DFGLA+ + + A PI+ T APE ++G
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWT----APEAALYGRF 182
Query: 428 DEKTDVFAFGVLLLEIIT-GRKP 449
K+DV++FG+LL E+ T GR P
Sbjct: 183 TIKSDVWSFGILLTELTTKGRVP 205
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 117/264 (44%), Gaps = 28/264 (10%)
Query: 254 VGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G G Y EVY+G +AVK L FL E ++ + HPN L+G
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLGV 284
Query: 313 CI-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
C E Y+I F GNL L + + + + + ++ + YL K + IH
Sbjct: 285 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIH 341
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLP-NKCTHHAA--IPIEGTFGYLAPEYFMHGIID 428
R++ A N L+G + ++ DFGL++ + + T HA PI+ T APE +
Sbjct: 342 RNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYNKFS 397
Query: 429 EKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEGEYDTDQM 487
K+DV+AFGVLL EI T G P P ++ + EL++ E
Sbjct: 398 IKSDVWAFGVLLWEIATYGMSPY------------PGIDLSQVYELLEKDYRMERPEGCP 445
Query: 488 HRLVLIADYCVRQTSAWRPSMSEV 511
++ + C + + RPS +E+
Sbjct: 446 EKVYELMRACWQWNPSDRPSFAEI 469
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 122/275 (44%), Gaps = 29/275 (10%)
Query: 254 VGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G G Y EVY G +AVK L FL E ++ + HPN L+G
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLGV 96
Query: 313 C-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
C +E Y++ + GNL L + + + + + ++ + YL K + IH
Sbjct: 97 CTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEK---KNFIH 153
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLP-NKCTHHAA--IPIEGTFGYLAPEYFMHGIID 428
RD+ A N L+G + ++ DFGL++ + + T HA PI+ T APE +
Sbjct: 154 RDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYNTFS 209
Query: 429 EKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEGEYDTDQM 487
K+DV+AFGVLL EI T G P P ++ + +L++ E
Sbjct: 210 IKSDVWAFGVLLWEIATYGMSPY------------PGIDLSQVYDLLEKGYRMEQPEGCP 257
Query: 488 HRLVLIADYCVRQTSAWRPSMSEVLELL-TSGHDS 521
++ + C + + A RPS +E + T HDS
Sbjct: 258 PKVYELMRACWKWSPADRPSFAETHQAFETMFHDS 292
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 117/264 (44%), Gaps = 28/264 (10%)
Query: 254 VGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G G Y EVY+G +AVK L FL E ++ + HPN L+G
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLGV 323
Query: 313 CI-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
C E Y+I F GNL L + + + + + ++ + YL K + IH
Sbjct: 324 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 380
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLP-NKCTHHAA--IPIEGTFGYLAPEYFMHGIID 428
R++ A N L+G + ++ DFGL++ + + T HA PI+ T APE +
Sbjct: 381 RNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYNKFS 436
Query: 429 EKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEGEYDTDQM 487
K+DV+AFGVLL EI T G P P ++ + EL++ E
Sbjct: 437 IKSDVWAFGVLLWEIATYGMSPY------------PGIDLSQVYELLEKDYRMERPEGCP 484
Query: 488 HRLVLIADYCVRQTSAWRPSMSEV 511
++ + C + + RPS +E+
Sbjct: 485 EKVYELMRACWQWNPSDRPSFAEI 508
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 121/264 (45%), Gaps = 20/264 (7%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + VYKG +AVK L F E+G++ H N +G
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 314 IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRD 373
+ L ++ + + +L LH +K E I ARG+ YLH + IIHRD
Sbjct: 90 TKPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHA---KSIIHRD 145
Query: 374 IKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDE---K 430
+K++N+ L D +I DFGLA H + G+ ++APE + +
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 431 TDVFAFGVLLLEIITGRKPVD--SSRQNLVLWAKPLMESGNLTELVDPSLEGEYDTDQMH 488
+DV+AFG++L E++TG+ P ++R ++ ++ G+L+ P L + ++
Sbjct: 206 SDVYAFGIVLYELMTGQLPYSNINNRDQII----EMVGRGSLS----PDLS-KVRSNCPK 256
Query: 489 RLVLIADYCVRQTSAWRPSMSEVL 512
R+ + C+++ RPS +L
Sbjct: 257 RMKRLMAECLKKKRDERPSFPRIL 280
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 117/264 (44%), Gaps = 28/264 (10%)
Query: 254 VGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G G Y EVY+G +AVK L FL E ++ + HPN L+G
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLGV 281
Query: 313 CI-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
C E Y+I F GNL L + + + + + ++ + YL K + IH
Sbjct: 282 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 338
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLP-NKCTHHAA--IPIEGTFGYLAPEYFMHGIID 428
R++ A N L+G + ++ DFGL++ + + T HA PI+ T APE +
Sbjct: 339 RNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYNKFS 394
Query: 429 EKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEGEYDTDQM 487
K+DV+AFGVLL EI T G P P ++ + EL++ E
Sbjct: 395 IKSDVWAFGVLLWEIATYGMSPY------------PGIDLSQVYELLEKDYRMERPEGCP 442
Query: 488 HRLVLIADYCVRQTSAWRPSMSEV 511
++ + C + + RPS +E+
Sbjct: 443 EKVYELMRACWQWNPSDRPSFAEI 466
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 93/199 (46%), Gaps = 9/199 (4%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + VYKG +AVK L F E+G++ H N +G
Sbjct: 20 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 314 IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRD 373
+ L ++ + + +L LH +K E I ARG+ YLH + IIHRD
Sbjct: 78 TKPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHA---KSIIHRD 133
Query: 374 IKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDE---K 430
+K++N+ L D +I DFGLA H + G+ ++APE + +
Sbjct: 134 LKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 193
Query: 431 TDVFAFGVLLLEIITGRKP 449
+DV+AFG++L E++TG+ P
Sbjct: 194 SDVYAFGIVLYELMTGQLP 212
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 100/198 (50%), Gaps = 6/198 (3%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + V++ G +AVK L FL E+ I+ + HPN +G
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 314 IEN-GLYLIFNFSQNGNLDAALHDERSK-SLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
+ L ++ + G+L LH ++ L+ R + VA+G++YLH I+H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVH 162
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKT 431
R++K+ N+L+ + ++ DFGL++ T ++ GT ++APE +EK+
Sbjct: 163 RNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKS 220
Query: 432 DVFAFGVLLLEIITGRKP 449
DV++FGV+L E+ T ++P
Sbjct: 221 DVYSFGVILWELATLQQP 238
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 120/264 (45%), Gaps = 20/264 (7%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + VYKG +AVK L F E+G++ H N +G
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 314 IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRD 373
L ++ + + +L LH +K E I ARG+ YLH + IIHRD
Sbjct: 90 TAPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHA---KSIIHRD 145
Query: 374 IKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDE---K 430
+K++N+ L D +I DFGLA H + G+ ++APE + +
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 431 TDVFAFGVLLLEIITGRKPVD--SSRQNLVLWAKPLMESGNLTELVDPSLEGEYDTDQMH 488
+DV+AFG++L E++TG+ P ++R ++ ++ G+L+ P L + ++
Sbjct: 206 SDVYAFGIVLYELMTGQLPYSNINNRDQII----EMVGRGSLS----PDL-SKVRSNCPK 256
Query: 489 RLVLIADYCVRQTSAWRPSMSEVL 512
R+ + C+++ RPS +L
Sbjct: 257 RMKRLMAECLKKKRDERPSFPRIL 280
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + EV+ G + K+AVK L FL E ++ + H L
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYAVV 85
Query: 314 IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRD 373
+ +Y+I + +NG+L L L + +A G+ ++ + R IHRD
Sbjct: 86 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 142
Query: 374 IKASNVLLGPDFEPQITDFGLAKWLPNK---CTHHAAIPIEGTFGYLAPEYFMHGIIDEK 430
++A+N+L+ +I DFGLA+ + + A PI+ T APE +G K
Sbjct: 143 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT----APEAINYGTFTIK 198
Query: 431 TDVFAFGVLLLEIIT-GRKP 449
+DV++FG+LL EI+T GR P
Sbjct: 199 SDVWSFGILLTEIVTHGRIP 218
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + EV+ G + K+AVK L FL E ++ + H L
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYAVV 83
Query: 314 IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRD 373
+ +Y+I + +NG+L L L + +A G+ ++ + R IHRD
Sbjct: 84 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 140
Query: 374 IKASNVLLGPDFEPQITDFGLAKWLPNK---CTHHAAIPIEGTFGYLAPEYFMHGIIDEK 430
++A+N+L+ +I DFGLA+ + + A PI+ T APE +G K
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT----APEAINYGTFTIK 196
Query: 431 TDVFAFGVLLLEIIT-GRKP 449
+DV++FG+LL EI+T GR P
Sbjct: 197 SDVWSFGILLTEIVTHGRIP 216
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + EV+ G + K+AVK L FL E ++ + H L
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYAVV 78
Query: 314 IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRD 373
+ +Y+I + +NG+L L L + +A G+ ++ + R IHRD
Sbjct: 79 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 135
Query: 374 IKASNVLLGPDFEPQITDFGLAKWLPNK---CTHHAAIPIEGTFGYLAPEYFMHGIIDEK 430
++A+N+L+ +I DFGLA+ + + A PI+ T APE +G K
Sbjct: 136 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT----APEAINYGTFTIK 191
Query: 431 TDVFAFGVLLLEIIT-GRKP 449
+DV++FG+LL EI+T GR P
Sbjct: 192 SDVWSFGILLTEIVTHGRIP 211
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + EV+ G + K+AVK L FL E ++ + H L
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYAVV 86
Query: 314 IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRD 373
+ +Y+I + +NG+L L L + +A G+ ++ + R IHRD
Sbjct: 87 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 143
Query: 374 IKASNVLLGPDFEPQITDFGLAKWLPNK---CTHHAAIPIEGTFGYLAPEYFMHGIIDEK 430
++A+N+L+ +I DFGLA+ + + A PI+ T APE +G K
Sbjct: 144 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT----APEAINYGTFTIK 199
Query: 431 TDVFAFGVLLLEIIT-GRKP 449
+DV++FG+LL EI+T GR P
Sbjct: 200 SDVWSFGILLTEIVTHGRIP 219
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + EV+ G + K+AVK L FL E ++ + H L
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYAVV 79
Query: 314 IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRD 373
+ +Y+I + +NG+L L L + +A G+ ++ + R IHRD
Sbjct: 80 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 136
Query: 374 IKASNVLLGPDFEPQITDFGLAKWLPNK---CTHHAAIPIEGTFGYLAPEYFMHGIIDEK 430
++A+N+L+ +I DFGLA+ + + A PI+ T APE +G K
Sbjct: 137 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT----APEAINYGTFTIK 192
Query: 431 TDVFAFGVLLLEIIT-GRKP 449
+DV++FG+LL EI+T GR P
Sbjct: 193 SDVWSFGILLTEIVTHGRIP 212
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + EV+ G + K+AVK L FL E ++ + H L
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYAVV 82
Query: 314 IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRD 373
+ +Y+I + +NG+L L L + +A G+ ++ + R IHRD
Sbjct: 83 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 139
Query: 374 IKASNVLLGPDFEPQITDFGLAKWLPNK---CTHHAAIPIEGTFGYLAPEYFMHGIIDEK 430
++A+N+L+ +I DFGLA+ + + A PI+ T APE +G K
Sbjct: 140 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT----APEAINYGTFTIK 195
Query: 431 TDVFAFGVLLLEIIT-GRKP 449
+DV++FG+LL EI+T GR P
Sbjct: 196 SDVWSFGILLTEIVTHGRIP 215
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + EV+ G + K+AVK L FL E ++ + H L
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYAVV 83
Query: 314 IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRD 373
+ +Y+I + +NG+L L L + +A G+ ++ + R IHRD
Sbjct: 84 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 140
Query: 374 IKASNVLLGPDFEPQITDFGLAKWLPNK---CTHHAAIPIEGTFGYLAPEYFMHGIIDEK 430
++A+N+L+ +I DFGLA+ + + A PI+ T APE +G K
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT----APEAINYGTFTIK 196
Query: 431 TDVFAFGVLLLEIIT-GRKP 449
+DV++FG+LL EI+T GR P
Sbjct: 197 SDVWSFGILLTEIVTHGRIP 216
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + EV+ G + K+AVK L FL E ++ + H L
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYAVV 72
Query: 314 IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRD 373
+ +Y+I + +NG+L L L + +A G+ ++ + R IHRD
Sbjct: 73 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 129
Query: 374 IKASNVLLGPDFEPQITDFGLAKWLPNK---CTHHAAIPIEGTFGYLAPEYFMHGIIDEK 430
++A+N+L+ +I DFGLA+ + + A PI+ T APE +G K
Sbjct: 130 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT----APEAINYGTFTIK 185
Query: 431 TDVFAFGVLLLEIIT-GRKP 449
+DV++FG+LL EI+T GR P
Sbjct: 186 SDVWSFGILLTEIVTHGRIP 205
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + EV+ G + K+AVK L FL E ++ + H L
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYAVV 87
Query: 314 IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRD 373
+ +Y+I + +NG+L L L + +A G+ ++ + R IHRD
Sbjct: 88 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 144
Query: 374 IKASNVLLGPDFEPQITDFGLAKWLPNK---CTHHAAIPIEGTFGYLAPEYFMHGIIDEK 430
++A+N+L+ +I DFGLA+ + + A PI+ T APE +G K
Sbjct: 145 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT----APEAINYGTFTIK 200
Query: 431 TDVFAFGVLLLEIIT-GRKP 449
+DV++FG+LL EI+T GR P
Sbjct: 201 SDVWSFGILLTEIVTHGRIP 220
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 6/198 (3%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + V++ G +AVK L FL E+ I+ + HPN +G
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 314 IEN-GLYLIFNFSQNGNLDAALHDERSK-SLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
+ L ++ + G+L LH ++ L+ R + VA+G++YLH I+H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVH 162
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKT 431
RD+K+ N+L+ + ++ DFGL++ + GT ++APE +EK+
Sbjct: 163 RDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLRDEPSNEKS 220
Query: 432 DVFAFGVLLLEIITGRKP 449
DV++FGV+L E+ T ++P
Sbjct: 221 DVYSFGVILWELATLQQP 238
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + EV+ G + K+AVK L FL E ++ + H L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYAVV 77
Query: 314 IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRD 373
+ +Y+I + +NG+L L L + +A G+ ++ + R IHRD
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 134
Query: 374 IKASNVLLGPDFEPQITDFGLAKWLPNK---CTHHAAIPIEGTFGYLAPEYFMHGIIDEK 430
++A+N+L+ +I DFGLA+ + + A PI+ T APE +G K
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT----APEAINYGTFTIK 190
Query: 431 TDVFAFGVLLLEIIT-GRKP 449
+DV++FG+LL EI+T GR P
Sbjct: 191 SDVWSFGILLTEIVTHGRIP 210
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + EV+ G + K+AVK L FL E ++ + H L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYAVV 77
Query: 314 IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRD 373
+ +Y+I + +NG+L L L + +A G+ ++ + R IHRD
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 134
Query: 374 IKASNVLLGPDFEPQITDFGLAKWLPNK---CTHHAAIPIEGTFGYLAPEYFMHGIIDEK 430
++A+N+L+ +I DFGLA+ + + A PI+ T APE +G K
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT----APEAINYGTFTIK 190
Query: 431 TDVFAFGVLLLEIIT-GRKP 449
+DV++FG+LL EI+T GR P
Sbjct: 191 SDVWSFGILLTEIVTHGRIP 210
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 140/286 (48%), Gaps = 42/286 (14%)
Query: 249 HSENMVGQGGYSEVYKGNL--SDGRKI--AVKRLXXXXXXXXXXXXFLMELGIIGHVCHP 304
H ++G+G + VY G L +DG+KI AVK L FL E I+ HP
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHP 90
Query: 305 NTATLVGCCI--ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV---LGVARGLH 359
N +L+G C+ E ++ + ++G+L + +E P ++ L VA+G+
Sbjct: 91 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN----PTVKDLIGFGLQVAKGMK 146
Query: 360 YLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNK---CTHH---AAIPIEGT 413
YL ++ +HRD+ A N +L F ++ DFGLA+ + +K H+ A +P++
Sbjct: 147 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVK-- 201
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP--VDSSRQNLVLWAKPLMESGNLT 471
++A E K+DV++FGVLL E++T P D + ++ ++ L++ L
Sbjct: 202 --WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY---LLQGRRL- 255
Query: 472 ELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELLTS 517
L+ EY D ++ ++L C + RPS SE++ +++
Sbjct: 256 ------LQPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISA 292
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + EV+ G + K+AVK L FL E ++ + H L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYAVV 77
Query: 314 IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRD 373
+ +Y+I + +NG+L L L + +A G+ ++ + R IHRD
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 134
Query: 374 IKASNVLLGPDFEPQITDFGLAKWLPNK---CTHHAAIPIEGTFGYLAPEYFMHGIIDEK 430
++A+N+L+ +I DFGLA+ + + A PI+ T APE +G K
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT----APEAINYGTFTIK 190
Query: 431 TDVFAFGVLLLEIIT-GRKP 449
+DV++FG+LL EI+T GR P
Sbjct: 191 SDVWSFGILLTEIVTHGRIP 210
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 140/286 (48%), Gaps = 42/286 (14%)
Query: 249 HSENMVGQGGYSEVYKGNL--SDGRKI--AVKRLXXXXXXXXXXXXFLMELGIIGHVCHP 304
H ++G+G + VY G L +DG+KI AVK L FL E I+ HP
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHP 91
Query: 305 NTATLVGCCI--ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV---LGVARGLH 359
N +L+G C+ E ++ + ++G+L + +E P ++ L VA+G+
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN----PTVKDLIGFGLQVAKGMK 147
Query: 360 YLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNK---CTHH---AAIPIEGT 413
YL ++ +HRD+ A N +L F ++ DFGLA+ + +K H+ A +P++
Sbjct: 148 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK-- 202
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP--VDSSRQNLVLWAKPLMESGNLT 471
++A E K+DV++FGVLL E++T P D + ++ ++ L++ L
Sbjct: 203 --WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY---LLQGRRL- 256
Query: 472 ELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELLTS 517
L+ EY D ++ ++L C + RPS SE++ +++
Sbjct: 257 ------LQPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISA 293
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 140/286 (48%), Gaps = 42/286 (14%)
Query: 249 HSENMVGQGGYSEVYKGNL--SDGRKI--AVKRLXXXXXXXXXXXXFLMELGIIGHVCHP 304
H ++G+G + VY G L +DG+KI AVK L FL E I+ HP
Sbjct: 25 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHP 83
Query: 305 NTATLVGCCI--ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV---LGVARGLH 359
N +L+G C+ E ++ + ++G+L + +E P ++ L VA+G+
Sbjct: 84 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN----PTVKDLIGFGLQVAKGMK 139
Query: 360 YLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNK---CTHH---AAIPIEGT 413
YL ++ +HRD+ A N +L F ++ DFGLA+ + +K H+ A +P++
Sbjct: 140 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK-- 194
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP--VDSSRQNLVLWAKPLMESGNLT 471
++A E K+DV++FGVLL E++T P D + ++ ++ L++ L
Sbjct: 195 --WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY---LLQGRRL- 248
Query: 472 ELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELLTS 517
L+ EY D ++ ++L C + RPS SE++ +++
Sbjct: 249 ------LQPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISA 285
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 140/286 (48%), Gaps = 42/286 (14%)
Query: 249 HSENMVGQGGYSEVYKGNL--SDGRKI--AVKRLXXXXXXXXXXXXFLMELGIIGHVCHP 304
H ++G+G + VY G L +DG+KI AVK L FL E I+ HP
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHP 90
Query: 305 NTATLVGCCI--ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV---LGVARGLH 359
N +L+G C+ E ++ + ++G+L + +E P ++ L VA+G+
Sbjct: 91 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN----PTVKDLIGFGLQVAKGMK 146
Query: 360 YLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNK---CTHH---AAIPIEGT 413
YL ++ +HRD+ A N +L F ++ DFGLA+ + +K H+ A +P++
Sbjct: 147 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK-- 201
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP--VDSSRQNLVLWAKPLMESGNLT 471
++A E K+DV++FGVLL E++T P D + ++ ++ L++ L
Sbjct: 202 --WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY---LLQGRRL- 255
Query: 472 ELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELLTS 517
L+ EY D ++ ++L C + RPS SE++ +++
Sbjct: 256 ------LQPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISA 292
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 140/286 (48%), Gaps = 42/286 (14%)
Query: 249 HSENMVGQGGYSEVYKGNL--SDGRKI--AVKRLXXXXXXXXXXXXFLMELGIIGHVCHP 304
H ++G+G + VY G L +DG+KI AVK L FL E I+ HP
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHP 89
Query: 305 NTATLVGCCI--ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV---LGVARGLH 359
N +L+G C+ E ++ + ++G+L + +E P ++ L VA+G+
Sbjct: 90 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN----PTVKDLIGFGLQVAKGMK 145
Query: 360 YLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNK---CTHH---AAIPIEGT 413
YL ++ +HRD+ A N +L F ++ DFGLA+ + +K H+ A +P++
Sbjct: 146 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK-- 200
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP--VDSSRQNLVLWAKPLMESGNLT 471
++A E K+DV++FGVLL E++T P D + ++ ++ L++ L
Sbjct: 201 --WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY---LLQGRRL- 254
Query: 472 ELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELLTS 517
L+ EY D ++ ++L C + RPS SE++ +++
Sbjct: 255 ------LQPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISA 291
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 140/286 (48%), Gaps = 42/286 (14%)
Query: 249 HSENMVGQGGYSEVYKGNL--SDGRKI--AVKRLXXXXXXXXXXXXFLMELGIIGHVCHP 304
H ++G+G + VY G L +DG+KI AVK L FL E I+ HP
Sbjct: 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHP 88
Query: 305 NTATLVGCCI--ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV---LGVARGLH 359
N +L+G C+ E ++ + ++G+L + +E P ++ L VA+G+
Sbjct: 89 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN----PTVKDLIGFGLQVAKGMK 144
Query: 360 YLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNK---CTHH---AAIPIEGT 413
YL ++ +HRD+ A N +L F ++ DFGLA+ + +K H+ A +P++
Sbjct: 145 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK-- 199
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP--VDSSRQNLVLWAKPLMESGNLT 471
++A E K+DV++FGVLL E++T P D + ++ ++ L++ L
Sbjct: 200 --WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY---LLQGRRL- 253
Query: 472 ELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELLTS 517
L+ EY D ++ ++L C + RPS SE++ +++
Sbjct: 254 ------LQPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISA 290
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 140/286 (48%), Gaps = 42/286 (14%)
Query: 249 HSENMVGQGGYSEVYKGNL--SDGRKI--AVKRLXXXXXXXXXXXXFLMELGIIGHVCHP 304
H ++G+G + VY G L +DG+KI AVK L FL E I+ HP
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHP 86
Query: 305 NTATLVGCCI--ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV---LGVARGLH 359
N +L+G C+ E ++ + ++G+L + +E P ++ L VA+G+
Sbjct: 87 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN----PTVKDLIGFGLQVAKGMK 142
Query: 360 YLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNK---CTHH---AAIPIEGT 413
YL ++ +HRD+ A N +L F ++ DFGLA+ + +K H+ A +P++
Sbjct: 143 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK-- 197
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP--VDSSRQNLVLWAKPLMESGNLT 471
++A E K+DV++FGVLL E++T P D + ++ ++ L++ L
Sbjct: 198 --WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY---LLQGRRL- 251
Query: 472 ELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELLTS 517
L+ EY D ++ ++L C + RPS SE++ +++
Sbjct: 252 ------LQPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISA 288
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 140/286 (48%), Gaps = 42/286 (14%)
Query: 249 HSENMVGQGGYSEVYKGNL--SDGRKI--AVKRLXXXXXXXXXXXXFLMELGIIGHVCHP 304
H ++G+G + VY G L +DG+KI AVK L FL E I+ HP
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHP 91
Query: 305 NTATLVGCCI--ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV---LGVARGLH 359
N +L+G C+ E ++ + ++G+L + +E P ++ L VA+G+
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN----PTVKDLIGFGLQVAKGMK 147
Query: 360 YLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNK---CTHH---AAIPIEGT 413
YL ++ +HRD+ A N +L F ++ DFGLA+ + +K H+ A +P++
Sbjct: 148 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK-- 202
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP--VDSSRQNLVLWAKPLMESGNLT 471
++A E K+DV++FGVLL E++T P D + ++ ++ L++ L
Sbjct: 203 --WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY---LLQGRRL- 256
Query: 472 ELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELLTS 517
L+ EY D ++ ++L C + RPS SE++ +++
Sbjct: 257 ------LQPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISA 293
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 140/286 (48%), Gaps = 42/286 (14%)
Query: 249 HSENMVGQGGYSEVYKGNL--SDGRKI--AVKRLXXXXXXXXXXXXFLMELGIIGHVCHP 304
H ++G+G + VY G L +DG+KI AVK L FL E I+ HP
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHP 150
Query: 305 NTATLVGCCI--ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV---LGVARGLH 359
N +L+G C+ E ++ + ++G+L + +E P ++ L VA+G+
Sbjct: 151 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN----PTVKDLIGFGLQVAKGMK 206
Query: 360 YLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNK---CTHH---AAIPIEGT 413
+L ++ +HRD+ A N +L F ++ DFGLA+ + +K H+ A +P++
Sbjct: 207 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK-- 261
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP--VDSSRQNLVLWAKPLMESGNLT 471
++A E K+DV++FGVLL E++T P D + ++ ++ L++ L
Sbjct: 262 --WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY---LLQGRRL- 315
Query: 472 ELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELLTS 517
L+ EY D ++ ++L C + RPS SE++ +++
Sbjct: 316 ------LQPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISA 352
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 118/246 (47%), Gaps = 36/246 (14%)
Query: 221 GSLSNKEKHQPLLTCFSYEEISSATNNFHSENMVGQGGYSEVYKG-NLSDGRKI----AV 275
GS S + +Q LL E F ++G G + VYKG + +G K+ A+
Sbjct: 1 GSPSGEAPNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAI 53
Query: 276 KRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALH 335
K L L E ++ V +P+ L+G C+ + + LI G L +
Sbjct: 54 KELREATSPKANKE-ILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVR 112
Query: 336 DERSKS-----LEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQIT 390
+ + L W ++ +A+G++YL RR++HRD+ A NVL+ +IT
Sbjct: 113 EHKDNIGSQYLLNWCVQ------IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKIT 163
Query: 391 DFGLAKWL-PNKCTHHA---AIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT- 445
DFGLAK L + +HA +PI+ ++A E +H I ++DV+++GV + E++T
Sbjct: 164 DFGLAKLLGAEEKEYHAEGGKVPIK----WMALESILHRIYTHQSDVWSYGVTVWELMTF 219
Query: 446 GRKPVD 451
G KP D
Sbjct: 220 GSKPYD 225
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 134/280 (47%), Gaps = 39/280 (13%)
Query: 251 ENMVGQGGYSEVYKGNL--SDGRK---IAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
+ ++G G + EVYKG L S G+K +A+K L FL E GI+G H N
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVD-FLGEAGIMGQFSHHN 107
Query: 306 TATLVGCCIE-NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVL--GVARGLHYLH 362
L G + + +I + +NG LD L R K E+ + + + G+A G+ YL
Sbjct: 108 IIRLEGVISKYKPMMIITEYMENGALDKFL---REKDGEFSVLQLVGMLRGIAAGMKYL- 163
Query: 363 KGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNK-----CTHHAAIPIEGTFGYL 417
+HRD+ A N+L+ + +++DFGL++ L + T IPI T
Sbjct: 164 --ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWT---- 217
Query: 418 APEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNLTELVD- 475
APE + +DV++FG+++ E++T G +P + V+ K + + L +D
Sbjct: 218 APEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVM--KAINDGFRLPTPMDC 275
Query: 476 PSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELL 515
PS +++L++ C +Q A RP ++++ +L
Sbjct: 276 PS--------AIYQLMM---QCWQQERARRPKFADIVSIL 304
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 251 ENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLV 310
E +G G + EV+ + K+AVK + FL E ++ + H L
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA---FLAEANVMKTLQHDKLVKLH 249
Query: 311 GCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRII 370
+ +Y+I F G+L L + P +A G+ ++ + R I
Sbjct: 250 AVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYI 306
Query: 371 HRDIKASNVLLGPDFEPQITDFGLAKWLPNK---CTHHAAIPIEGTFGYLAPEYFMHGII 427
HRD++A+N+L+ +I DFGLA+ + + A PI+ T APE G
Sbjct: 307 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWT----APEAINFGSF 362
Query: 428 DEKTDVFAFGVLLLEIIT-GRKP 449
K+DV++FG+LL+EI+T GR P
Sbjct: 363 TIKSDVWSFGILLMEIVTYGRIP 385
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 140/286 (48%), Gaps = 42/286 (14%)
Query: 249 HSENMVGQGGYSEVYKGNL--SDGRKI--AVKRLXXXXXXXXXXXXFLMELGIIGHVCHP 304
H ++G+G + VY G L +DG+KI AVK L FL E I+ HP
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHP 92
Query: 305 NTATLVGCCI--ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV---LGVARGLH 359
N +L+G C+ E ++ + ++G+L + +E P ++ L VA+G+
Sbjct: 93 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN----PTVKDLIGFGLQVAKGMK 148
Query: 360 YLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNK---CTHH---AAIPIEGT 413
+L ++ +HRD+ A N +L F ++ DFGLA+ + +K H+ A +P++
Sbjct: 149 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK-- 203
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP--VDSSRQNLVLWAKPLMESGNLT 471
++A E K+DV++FGVLL E++T P D + ++ ++ L++ L
Sbjct: 204 --WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY---LLQGRRL- 257
Query: 472 ELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELLTS 517
L+ EY D ++ ++L C + RPS SE++ +++
Sbjct: 258 ------LQPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISA 294
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 140/286 (48%), Gaps = 42/286 (14%)
Query: 249 HSENMVGQGGYSEVYKGNL--SDGRKI--AVKRLXXXXXXXXXXXXFLMELGIIGHVCHP 304
H ++G+G + VY G L +DG+KI AVK L FL E I+ HP
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHP 92
Query: 305 NTATLVGCCI--ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV---LGVARGLH 359
N +L+G C+ E ++ + ++G+L + +E P ++ L VA+G+
Sbjct: 93 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN----PTVKDLIGFGLQVAKGMK 148
Query: 360 YLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNK---CTHH---AAIPIEGT 413
+L ++ +HRD+ A N +L F ++ DFGLA+ + +K H+ A +P++
Sbjct: 149 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVK-- 203
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP--VDSSRQNLVLWAKPLMESGNLT 471
++A E K+DV++FGVLL E++T P D + ++ ++ L++ L
Sbjct: 204 --WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY---LLQGRRL- 257
Query: 472 ELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELLTS 517
L+ EY D ++ ++L C + RPS SE++ +++
Sbjct: 258 ------LQPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISA 294
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 140/286 (48%), Gaps = 42/286 (14%)
Query: 249 HSENMVGQGGYSEVYKGNL--SDGRKI--AVKRLXXXXXXXXXXXXFLMELGIIGHVCHP 304
H ++G+G + VY G L +DG+KI AVK L FL E I+ HP
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHP 89
Query: 305 NTATLVGCCI--ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV---LGVARGLH 359
N +L+G C+ E ++ + ++G+L + +E P ++ L VA+G+
Sbjct: 90 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN----PTVKDLIGFGLQVAKGMK 145
Query: 360 YLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNK---CTHH---AAIPIEGT 413
+L ++ +HRD+ A N +L F ++ DFGLA+ + +K H+ A +P++
Sbjct: 146 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK-- 200
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP--VDSSRQNLVLWAKPLMESGNLT 471
++A E K+DV++FGVLL E++T P D + ++ ++ L++ L
Sbjct: 201 --WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY---LLQGRRL- 254
Query: 472 ELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELLTS 517
L+ EY D ++ ++L C + RPS SE++ +++
Sbjct: 255 ------LQPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISA 291
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 140/286 (48%), Gaps = 42/286 (14%)
Query: 249 HSENMVGQGGYSEVYKGNL--SDGRKI--AVKRLXXXXXXXXXXXXFLMELGIIGHVCHP 304
H ++G+G + VY G L +DG+KI AVK L FL E I+ HP
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHP 91
Query: 305 NTATLVGCCI--ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV---LGVARGLH 359
N +L+G C+ E ++ + ++G+L + +E P ++ L VA+G+
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN----PTVKDLIGFGLQVAKGMK 147
Query: 360 YLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNK---CTHH---AAIPIEGT 413
+L ++ +HRD+ A N +L F ++ DFGLA+ + +K H+ A +P++
Sbjct: 148 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK-- 202
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP--VDSSRQNLVLWAKPLMESGNLT 471
++A E K+DV++FGVLL E++T P D + ++ ++ L++ L
Sbjct: 203 --WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY---LLQGRRL- 256
Query: 472 ELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELLTS 517
L+ EY D ++ ++L C + RPS SE++ +++
Sbjct: 257 ------LQPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISA 293
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + EV+ G + K+AVK L FL E ++ + H L
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYAVV 73
Query: 314 IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRD 373
+ +Y+I + +NG+L L L + +A G+ ++ + R IHR+
Sbjct: 74 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRN 130
Query: 374 IKASNVLLGPDFEPQITDFGLAKWLPNK---CTHHAAIPIEGTFGYLAPEYFMHGIIDEK 430
++A+N+L+ +I DFGLA+ + + A PI+ T APE +G K
Sbjct: 131 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT----APEAINYGTFTIK 186
Query: 431 TDVFAFGVLLLEIIT-GRKP 449
+DV++FG+LL EI+T GR P
Sbjct: 187 SDVWSFGILLTEIVTHGRIP 206
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 92/199 (46%), Gaps = 9/199 (4%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + VYKG +AVK L F E+G++ H N +G
Sbjct: 43 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 314 IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRD 373
+ L ++ + + +L LH +K E I A+G+ YLH + IIHRD
Sbjct: 101 TKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHA---KSIIHRD 156
Query: 374 IKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFM---HGIIDEK 430
+K++N+ L D +I DFGLA H + G+ ++APE +
Sbjct: 157 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 216
Query: 431 TDVFAFGVLLLEIITGRKP 449
+DV+AFG++L E++TG+ P
Sbjct: 217 SDVYAFGIVLYELMTGQLP 235
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 14/200 (7%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G EV+ G + K+AVK L FL E ++ + H L
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYAVV 77
Query: 314 IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRD 373
+ +Y+I + +NG+L L L + +A G+ ++ + R IHRD
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 134
Query: 374 IKASNVLLGPDFEPQITDFGLAKWLPNK---CTHHAAIPIEGTFGYLAPEYFMHGIIDEK 430
++A+N+L+ +I DFGLA+ + + A PI+ T APE +G K
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWT----APEAINYGTFTIK 190
Query: 431 TDVFAFGVLLLEIIT-GRKP 449
+DV++FG+LL EI+T GR P
Sbjct: 191 SDVWSFGILLTEIVTHGRIP 210
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 140/286 (48%), Gaps = 42/286 (14%)
Query: 249 HSENMVGQGGYSEVYKGNL--SDGRKI--AVKRLXXXXXXXXXXXXFLMELGIIGHVCHP 304
H ++G+G + VY G L +DG+KI AVK L FL E I+ HP
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHP 91
Query: 305 NTATLVGCCI--ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV---LGVARGLH 359
N +L+G C+ E ++ + ++G+L + +E P ++ L VA+G+
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN----PTVKDLIGFGLQVAKGMK 147
Query: 360 YLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNK---CTHH---AAIPIEGT 413
+L ++ +HRD+ A N +L F ++ DFGLA+ + +K H+ A +P++
Sbjct: 148 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK-- 202
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP--VDSSRQNLVLWAKPLMESGNLT 471
++A E K+DV++FGVLL E++T P D + ++ ++ L++ L
Sbjct: 203 --WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY---LLQGRRL- 256
Query: 472 ELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELLTS 517
L+ EY D ++ ++L C + RPS SE++ +++
Sbjct: 257 ------LQPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISA 293
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 140/286 (48%), Gaps = 42/286 (14%)
Query: 249 HSENMVGQGGYSEVYKGNL--SDGRKI--AVKRLXXXXXXXXXXXXFLMELGIIGHVCHP 304
H ++G+G + VY G L +DG+KI AVK L FL E I+ HP
Sbjct: 38 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHP 96
Query: 305 NTATLVGCCI--ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV---LGVARGLH 359
N +L+G C+ E ++ + ++G+L + +E P ++ L VA+G+
Sbjct: 97 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN----PTVKDLIGFGLQVAKGMK 152
Query: 360 YLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNK---CTHH---AAIPIEGT 413
+L ++ +HRD+ A N +L F ++ DFGLA+ + +K H+ A +P++
Sbjct: 153 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK-- 207
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP--VDSSRQNLVLWAKPLMESGNLT 471
++A E K+DV++FGVLL E++T P D + ++ ++ L++ L
Sbjct: 208 --WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY---LLQGRRL- 261
Query: 472 ELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELLTS 517
L+ EY D ++ ++L C + RPS SE++ +++
Sbjct: 262 ------LQPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISA 298
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 92/199 (46%), Gaps = 9/199 (4%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + VYKG +AVK L F E+G++ H N +G
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 314 IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRD 373
+ L ++ + + +L LH +K E I A+G+ YLH + IIHRD
Sbjct: 102 TKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHA---KSIIHRD 157
Query: 374 IKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFM---HGIIDEK 430
+K++N+ L D +I DFGLA H + G+ ++APE +
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 217
Query: 431 TDVFAFGVLLLEIITGRKP 449
+DV+AFG++L E++TG+ P
Sbjct: 218 SDVYAFGIVLYELMTGQLP 236
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 92/199 (46%), Gaps = 9/199 (4%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + VYKG +AVK L F E+G++ H N +G
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 314 IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRD 373
+ L ++ + + +L LH +K E I A+G+ YLH + IIHRD
Sbjct: 102 TKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHA---KSIIHRD 157
Query: 374 IKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFM---HGIIDEK 430
+K++N+ L D +I DFGLA H + G+ ++APE +
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 217
Query: 431 TDVFAFGVLLLEIITGRKP 449
+DV+AFG++L E++TG+ P
Sbjct: 218 SDVYAFGIVLYELMTGQLP 236
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 251 ENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLV 310
E +G G + EV+ + K+AVK + FL E ++ + H L
Sbjct: 20 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA---FLAEANVMKTLQHDKLVKLH 76
Query: 311 GCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRII 370
+ +Y+I F G+L L + P +A G+ ++ + R I
Sbjct: 77 AVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYI 133
Query: 371 HRDIKASNVLLGPDFEPQITDFGLAKWLPNK---CTHHAAIPIEGTFGYLAPEYFMHGII 427
HRD++A+N+L+ +I DFGLA+ + + A PI+ T APE G
Sbjct: 134 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWT----APEAINFGSF 189
Query: 428 DEKTDVFAFGVLLLEIIT-GRKP 449
K+DV++FG+LL+EI+T GR P
Sbjct: 190 TIKSDVWSFGILLMEIVTYGRIP 212
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 92/199 (46%), Gaps = 9/199 (4%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + VYKG +AVK L F E+G++ H N +G
Sbjct: 36 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 314 IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRD 373
+ L ++ + + +L LH +K E I A+G+ YLH + IIHRD
Sbjct: 94 TKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHA---KSIIHRD 149
Query: 374 IKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFM---HGIIDEK 430
+K++N+ L D +I DFGLA H + G+ ++APE +
Sbjct: 150 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 209
Query: 431 TDVFAFGVLLLEIITGRKP 449
+DV+AFG++L E++TG+ P
Sbjct: 210 SDVYAFGIVLYELMTGQLP 228
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 244 ATNNFHSENMVGQGGYSEVYKGNL-SDGRKIAVKRLXX-----XXXXXXXXXXFLMELGI 297
A N E +G+GG+ V+KG L D +A+K L F E+ I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 298 IGHVCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARG 357
+ ++ HPN L G + N ++ F G+L L D ++ ++W ++ +++L +A G
Sbjct: 77 MSNLNHPNIVKLYGL-MHNPPRMVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALG 134
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFE-----PQITDFGLAKWLPNKCTHHAAIPIEG 412
+ Y+ + I+HRD+++ N+ L E ++ DFGL++ + H+ + G
Sbjct: 135 IEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ-----SVHSVSGLLG 188
Query: 413 TFGYLAPEYF--MHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNL 470
F ++APE EK D ++F ++L I+TG P D + + + E G
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEG-- 246
Query: 471 TELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELLT 516
L D RL + + C RP S +++ L+
Sbjct: 247 -------LRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELS 285
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 109/221 (49%), Gaps = 29/221 (13%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKI----AVKRLXXXXXXXXXXXXFLMELGIIGH 300
F ++G G + VYKG + +G K+ A+K L L E ++
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE-ILDEAYVMAS 74
Query: 301 VCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKS-----LEWPIRYKIVLGVA 355
V +P+ L+G C+ + + LI G L + + + L W ++ +A
Sbjct: 75 VDNPHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IA 128
Query: 356 RGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL-PNKCTHHA---AIPIE 411
+G++YL RR++HRD+ A NVL+ +ITDFGLAK L + +HA +PI+
Sbjct: 129 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 185
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVD 451
++A E +H I ++DV+++GV + E++T G KP D
Sbjct: 186 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 92/199 (46%), Gaps = 9/199 (4%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + VYKG +AVK L F E+G++ H N +G
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 314 IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRD 373
+ L ++ + + +L LH +K E I A+G+ YLH + IIHRD
Sbjct: 79 TKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHA---KSIIHRD 134
Query: 374 IKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFM---HGIIDEK 430
+K++N+ L D +I DFGLA H + G+ ++APE +
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 194
Query: 431 TDVFAFGVLLLEIITGRKP 449
+DV+AFG++L E++TG+ P
Sbjct: 195 SDVYAFGIVLYELMTGQLP 213
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 92/199 (46%), Gaps = 9/199 (4%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + VYKG +AVK L F E+G++ H N +G
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 314 IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRD 373
+ L ++ + + +L LH +K E I A+G+ YLH + IIHRD
Sbjct: 79 TKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHA---KSIIHRD 134
Query: 374 IKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFM---HGIIDEK 430
+K++N+ L D +I DFGLA H + G+ ++APE +
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 194
Query: 431 TDVFAFGVLLLEIITGRKP 449
+DV+AFG++L E++TG+ P
Sbjct: 195 SDVYAFGIVLYELMTGQLP 213
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 92/199 (46%), Gaps = 9/199 (4%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + VYKG +AVK L F E+G++ H N +G
Sbjct: 18 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 314 IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRD 373
+ L ++ + + +L LH +K E I A+G+ YLH + IIHRD
Sbjct: 76 TKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHA---KSIIHRD 131
Query: 374 IKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFM---HGIIDEK 430
+K++N+ L D +I DFGLA H + G+ ++APE +
Sbjct: 132 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 191
Query: 431 TDVFAFGVLLLEIITGRKP 449
+DV+AFG++L E++TG+ P
Sbjct: 192 SDVYAFGIVLYELMTGQLP 210
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 122/269 (45%), Gaps = 20/269 (7%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + V+ G + K+A+K + F+ E ++ + HP L G C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED---FIEEAEVMMKLSHPKLVQLYGVC 74
Query: 314 IENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHR 372
+E + L+F F ++G L L +R + L V G+ YL + C +IHR
Sbjct: 75 LEQAPICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEAC---VIHR 130
Query: 373 DIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTD 432
D+ A N L+G + +++DFG+ +++ + + ++ + + +PE F K+D
Sbjct: 131 DLAARNCLVGENQVIKVSDFGMTRFVLDD-QYTSSTGTKFPVKWASPEVFSFSRYSSKSD 189
Query: 433 VFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEGEYDTDQMHRLVL 492
V++FGVL+ E+ + K +R N ++ + + L P L + +
Sbjct: 190 VWSFGVLMWEVFSEGKIPYENRSN----SEVVEDISTGFRLYKPRLASTH-------VYQ 238
Query: 493 IADYCVRQTSAWRPSMSEVLELLTSGHDS 521
I ++C R+ RP+ S +L L +S
Sbjct: 239 IMNHCWRERPEDRPAFSRLLRQLAEIAES 267
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 92/199 (46%), Gaps = 9/199 (4%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + VYKG +AVK L F E+G++ H N +G
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 314 IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRD 373
+ L ++ + + +L LH +K E I A+G+ YLH + IIHRD
Sbjct: 74 TKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHA---KSIIHRD 129
Query: 374 IKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFM---HGIIDEK 430
+K++N+ L D +I DFGLA H + G+ ++APE +
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 431 TDVFAFGVLLLEIITGRKP 449
+DV+AFG++L E++TG+ P
Sbjct: 190 SDVYAFGIVLYELMTGQLP 208
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 109/221 (49%), Gaps = 29/221 (13%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKI----AVKRLXXXXXXXXXXXXFLMELGIIGH 300
F ++G G + VYKG + +G K+ A+K L L E ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE-ILDEAYVMAS 76
Query: 301 VCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKS-----LEWPIRYKIVLGVA 355
V +P+ L+G C+ + + LI G L + + + L W ++ +A
Sbjct: 77 VDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 130
Query: 356 RGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL-PNKCTHHA---AIPIE 411
+G++YL RR++HRD+ A NVL+ +ITDFGLAK L + +HA +PI+
Sbjct: 131 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVD 451
++A E +H I ++DV+++GV + E++T G KP D
Sbjct: 188 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 139/313 (44%), Gaps = 48/313 (15%)
Query: 244 ATNNFHSENM--------VGQGGYSE-VYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLME 294
T N + ++M +G+G + + + + DGR+ +K + E
Sbjct: 14 GTENLYFQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRRE 73
Query: 295 LGIIGHVCHPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDER------SKSLEWPIR 347
+ ++ ++ HPN ENG LY++ ++ + G+L ++ ++ + L+W ++
Sbjct: 74 VAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQ 133
Query: 348 YKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAA 407
+ L ++H R+I+HRDIK+ N+ L D Q+ DFG+A+ L T A
Sbjct: 134 ------ICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVL--NSTVELA 182
Query: 408 IPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMES 467
GT YL+PE + + K+D++A G +L E+ T K E+
Sbjct: 183 RACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCT---------------LKHAFEA 227
Query: 468 GNLTELVDPSLEGEYDTDQMHR---LVLIADYCVRQTSAWRPSMSEVLELLTSGHDSEFA 524
G++ LV + G + +H L + ++ RPS++ +LE G ++
Sbjct: 228 GSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE---KGFIAKRI 284
Query: 525 KSWRMPEFTSDEL 537
+ + P+ ++E
Sbjct: 285 EKFLSPQLIAEEF 297
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 92/199 (46%), Gaps = 9/199 (4%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + VYKG +AVK L F E+G++ H N +G
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 314 IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRD 373
+ L ++ + + +L LH +K E I A+G+ YLH + IIHRD
Sbjct: 74 TKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHA---KSIIHRD 129
Query: 374 IKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFM---HGIIDEK 430
+K++N+ L D +I DFGLA H + G+ ++APE +
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 431 TDVFAFGVLLLEIITGRKP 449
+DV+AFG++L E++TG+ P
Sbjct: 190 SDVYAFGIVLYELMTGQLP 208
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 109/221 (49%), Gaps = 29/221 (13%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKI----AVKRLXXXXXXXXXXXXFLMELGIIGH 300
F ++G G + VYKG + +G K+ A+K L L E ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE-ILDEAYVMAS 75
Query: 301 VCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKS-----LEWPIRYKIVLGVA 355
V +P+ L+G C+ + + LI G L + + + L W ++ +A
Sbjct: 76 VDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 129
Query: 356 RGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL-PNKCTHHA---AIPIE 411
+G++YL RR++HRD+ A NVL+ +ITDFGLAK L + +HA +PI+
Sbjct: 130 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 186
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVD 451
++A E +H I ++DV+++GV + E++T G KP D
Sbjct: 187 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 109/221 (49%), Gaps = 29/221 (13%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKI----AVKRLXXXXXXXXXXXXFLMELGIIGH 300
F ++G G + VYKG + +G K+ A+K L L E ++
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE-ILDEAYVMAS 74
Query: 301 VCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKS-----LEWPIRYKIVLGVA 355
V +P+ L+G C+ + + LI G L + + + L W ++ +A
Sbjct: 75 VDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 128
Query: 356 RGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL-PNKCTHHA---AIPIE 411
+G++YL RR++HRD+ A NVL+ +ITDFGLAK L + +HA +PI+
Sbjct: 129 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 185
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVD 451
++A E +H I ++DV+++GV + E++T G KP D
Sbjct: 186 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 91/200 (45%), Gaps = 18/200 (9%)
Query: 251 ENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLV 310
E +G G + EV+ + K+AVK + FL E ++ + H L
Sbjct: 187 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA---FLAEANVMKTLQHDKLVKLH 243
Query: 311 GCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRII 370
+ +Y+I F G+L L + P +A G+ ++ + R I
Sbjct: 244 AVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYI 300
Query: 371 HRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEK 430
HRD++A+N+L+ +I DFGLA+ A PI+ T APE G K
Sbjct: 301 HRDLRAANILVSASLVCKIADFGLAR-------VGAKFPIKWT----APEAINFGSFTIK 349
Query: 431 TDVFAFGVLLLEIIT-GRKP 449
+DV++FG+LL+EI+T GR P
Sbjct: 350 SDVWSFGILLMEIVTYGRIP 369
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 109/221 (49%), Gaps = 29/221 (13%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKI----AVKRLXXXXXXXXXXXXFLMELGIIGH 300
F ++G G + VYKG + +G K+ A+K L L E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE-ILDEAYVMAS 73
Query: 301 VCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKS-----LEWPIRYKIVLGVA 355
V +P+ L+G C+ + + LI G L + + + L W ++ +A
Sbjct: 74 VDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 127
Query: 356 RGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL-PNKCTHHA---AIPIE 411
+G++YL RR++HRD+ A NVL+ +ITDFGLAK L + +HA +PI+
Sbjct: 128 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVD 451
++A E +H I ++DV+++GV + E++T G KP D
Sbjct: 185 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 109/221 (49%), Gaps = 29/221 (13%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKI----AVKRLXXXXXXXXXXXXFLMELGIIGH 300
F ++G G + VYKG + +G K+ A+K L L E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE-ILDEAYVMAS 73
Query: 301 VCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKS-----LEWPIRYKIVLGVA 355
V +P+ L+G C+ + + LI G L + + + L W ++ +A
Sbjct: 74 VDNPHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IA 127
Query: 356 RGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL-PNKCTHHA---AIPIE 411
+G++YL RR++HRD+ A NVL+ +ITDFGLAK L + +HA +PI+
Sbjct: 128 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVD 451
++A E +H I ++DV+++GV + E++T G KP D
Sbjct: 185 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 91/199 (45%), Gaps = 9/199 (4%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + VYKG +AVK L F E+G++ H N +G
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 314 IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRD 373
L ++ + + +L LH +K E I A+G+ YLH + IIHRD
Sbjct: 74 TAPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHA---KSIIHRD 129
Query: 374 IKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFM---HGIIDEK 430
+K++N+ L D +I DFGLA H + G+ ++APE +
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 431 TDVFAFGVLLLEIITGRKP 449
+DV+AFG++L E++TG+ P
Sbjct: 190 SDVYAFGIVLYELMTGQLP 208
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 103/226 (45%), Gaps = 28/226 (12%)
Query: 254 VGQGGYSEVYKGNLS------DGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTA 307
+G G + EVY+G +S ++AVK L FLME II + H N
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKLNHQNIV 97
Query: 308 TLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSK-----SLEWPIRYKIVLGVARGLHYL 361
+G +++ +++ G+L + L + R + SL + +A G YL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 362 HKGCKRRIIHRDIKASNVLL---GPDFEPQITDFGLAKWLPNKCTHH----AAIPIEGTF 414
+ IHRDI A N LL GP +I DFG+A+ + + A +P++
Sbjct: 158 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK--- 211
Query: 415 GYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVL 459
++ PE FM GI KTD ++FGVLL EI + G P S VL
Sbjct: 212 -WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 256
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 109/221 (49%), Gaps = 29/221 (13%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKI----AVKRLXXXXXXXXXXXXFLMELGIIGH 300
F ++G G + VYKG + +G K+ A+K L L E ++
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE-ILDEAYVMAS 83
Query: 301 VCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKS-----LEWPIRYKIVLGVA 355
V +P+ L+G C+ + + LI G L + + + L W ++ +A
Sbjct: 84 VDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 137
Query: 356 RGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL-PNKCTHHA---AIPIE 411
+G++YL RR++HRD+ A NVL+ +ITDFGLAK L + +HA +PI+
Sbjct: 138 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 194
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVD 451
++A E +H I ++DV+++GV + E++T G KP D
Sbjct: 195 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 109/221 (49%), Gaps = 29/221 (13%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKI----AVKRLXXXXXXXXXXXXFLMELGIIGH 300
F ++G G + VYKG + +G K+ A+K L L E ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE-ILDEAYVMAS 76
Query: 301 VCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKS-----LEWPIRYKIVLGVA 355
V +P+ L+G C+ + + LI G L + + + L W ++ +A
Sbjct: 77 VDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 130
Query: 356 RGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL-PNKCTHHA---AIPIE 411
+G++YL RR++HRD+ A NVL+ +ITDFGLAK L + +HA +PI+
Sbjct: 131 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVD 451
++A E +H I ++DV+++GV + E++T G KP D
Sbjct: 188 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 109/221 (49%), Gaps = 29/221 (13%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKI----AVKRLXXXXXXXXXXXXFLMELGIIGH 300
F ++G G + VYKG + +G K+ A+K L L E ++
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE-ILDEAYVMAS 80
Query: 301 VCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKS-----LEWPIRYKIVLGVA 355
V +P+ L+G C+ + + LI G L + + + L W ++ +A
Sbjct: 81 VDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 134
Query: 356 RGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL-PNKCTHHA---AIPIE 411
+G++YL RR++HRD+ A NVL+ +ITDFGLAK L + +HA +PI+
Sbjct: 135 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVD 451
++A E +H I ++DV+++GV + E++T G KP D
Sbjct: 192 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 109/221 (49%), Gaps = 29/221 (13%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKI----AVKRLXXXXXXXXXXXXFLMELGIIGH 300
F ++G G + VYKG + +G K+ A+K L L E ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE-ILDEAYVMAS 76
Query: 301 VCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKS-----LEWPIRYKIVLGVA 355
V +P+ L+G C+ + + LI G L + + + L W ++ +A
Sbjct: 77 VDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 130
Query: 356 RGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL-PNKCTHHA---AIPIE 411
+G++YL RR++HRD+ A NVL+ +ITDFGLAK L + +HA +PI+
Sbjct: 131 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVD 451
++A E +H I ++DV+++GV + E++T G KP D
Sbjct: 188 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 109/221 (49%), Gaps = 29/221 (13%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKI----AVKRLXXXXXXXXXXXXFLMELGIIGH 300
F ++G G + VYKG + +G K+ A+K L L E ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE-ILDEAYVMAS 75
Query: 301 VCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKS-----LEWPIRYKIVLGVA 355
V +P+ L+G C+ + + LI G L + + + L W ++ +A
Sbjct: 76 VDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 129
Query: 356 RGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL-PNKCTHHA---AIPIE 411
+G++YL RR++HRD+ A NVL+ +ITDFGLAK L + +HA +PI+
Sbjct: 130 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 186
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVD 451
++A E +H I ++DV+++GV + E++T G KP D
Sbjct: 187 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 109/221 (49%), Gaps = 29/221 (13%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKI----AVKRLXXXXXXXXXXXXFLMELGIIGH 300
F ++G G + VYKG + +G K+ A+K L L E ++
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE-ILDEAYVMAS 98
Query: 301 VCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKS-----LEWPIRYKIVLGVA 355
V +P+ L+G C+ + + LI G L + + + L W ++ +A
Sbjct: 99 VDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 152
Query: 356 RGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL-PNKCTHHA---AIPIE 411
+G++YL RR++HRD+ A NVL+ +ITDFGLAK L + +HA +PI+
Sbjct: 153 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 209
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVD 451
++A E +H I ++DV+++GV + E++T G KP D
Sbjct: 210 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 109/221 (49%), Gaps = 29/221 (13%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKI----AVKRLXXXXXXXXXXXXFLMELGIIGH 300
F ++G G + VYKG + +G K+ A+K L L E ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE-ILDEAYVMAS 76
Query: 301 VCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKS-----LEWPIRYKIVLGVA 355
V +P+ L+G C+ + + LI G L + + + L W ++ +A
Sbjct: 77 VDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 130
Query: 356 RGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL-PNKCTHHA---AIPIE 411
+G++YL RR++HRD+ A NVL+ +ITDFGLAK L + +HA +PI+
Sbjct: 131 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVD 451
++A E +H I ++DV+++GV + E++T G KP D
Sbjct: 188 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 102/226 (45%), Gaps = 28/226 (12%)
Query: 254 VGQGGYSEVYKGNLS------DGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTA 307
+G G + EVY+G +S ++AVK L FLME II H N
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 123
Query: 308 TLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSK-----SLEWPIRYKIVLGVARGLHYL 361
+G +++ +++ G+L + L + R + SL + +A G YL
Sbjct: 124 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 183
Query: 362 HKGCKRRIIHRDIKASNVLL---GPDFEPQITDFGLAKWLPNKCTHH----AAIPIEGTF 414
+ IHRDI A N LL GP +I DFG+A+ + + A +P++
Sbjct: 184 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK--- 237
Query: 415 GYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVL 459
++ PE FM GI KTD ++FGVLL EI + G P S VL
Sbjct: 238 -WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 282
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 109/221 (49%), Gaps = 29/221 (13%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKI----AVKRLXXXXXXXXXXXXFLMELGIIGH 300
F ++G G + VYKG + +G K+ A+K L L E ++
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE-ILDEAYVMAS 79
Query: 301 VCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKS-----LEWPIRYKIVLGVA 355
V +P+ L+G C+ + + LI G L + + + L W ++ +A
Sbjct: 80 VDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 133
Query: 356 RGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL-PNKCTHHA---AIPIE 411
+G++YL RR++HRD+ A NVL+ +ITDFGLAK L + +HA +PI+
Sbjct: 134 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 190
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVD 451
++A E +H I ++DV+++GV + E++T G KP D
Sbjct: 191 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 109/221 (49%), Gaps = 29/221 (13%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKI----AVKRLXXXXXXXXXXXXFLMELGIIGH 300
F ++G G + VYKG + +G K+ A+K L L E ++
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE-ILDEAYVMAS 67
Query: 301 VCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKS-----LEWPIRYKIVLGVA 355
V +P+ L+G C+ + + LI G L + + + L W ++ +A
Sbjct: 68 VDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 121
Query: 356 RGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL-PNKCTHHA---AIPIE 411
+G++YL RR++HRD+ A NVL+ +ITDFGLAK L + +HA +PI+
Sbjct: 122 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 178
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVD 451
++A E +H I ++DV+++GV + E++T G KP D
Sbjct: 179 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 109/221 (49%), Gaps = 29/221 (13%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKI----AVKRLXXXXXXXXXXXXFLMELGIIGH 300
F ++G G + VYKG + +G K+ A+K L L E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE-ILDEAYVMAS 73
Query: 301 VCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKS-----LEWPIRYKIVLGVA 355
V +P+ L+G C+ + + LI G L + + + L W ++ +A
Sbjct: 74 VDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 127
Query: 356 RGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL-PNKCTHHA---AIPIE 411
+G++YL RR++HRD+ A NVL+ +ITDFGLAK L + +HA +PI+
Sbjct: 128 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVD 451
++A E +H I ++DV+++GV + E++T G KP D
Sbjct: 185 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 109/221 (49%), Gaps = 29/221 (13%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKI----AVKRLXXXXXXXXXXXXFLMELGIIGH 300
F ++G G + VYKG + +G K+ A+K L L E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE-ILDEAYVMAS 73
Query: 301 VCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKS-----LEWPIRYKIVLGVA 355
V +P+ L+G C+ + + LI G L + + + L W ++ +A
Sbjct: 74 VDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 127
Query: 356 RGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL-PNKCTHHA---AIPIE 411
+G++YL RR++HRD+ A NVL+ +ITDFGLAK L + +HA +PI+
Sbjct: 128 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVD 451
++A E +H I ++DV+++GV + E++T G KP D
Sbjct: 185 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 122/269 (45%), Gaps = 20/269 (7%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + V+ G + K+A+K + F+ E ++ + HP L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED---FIEEAEVMMKLSHPKLVQLYGVC 71
Query: 314 IENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHR 372
+E + L+F F ++G L L +R + L V G+ YL + C +IHR
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEAC---VIHR 127
Query: 373 DIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTD 432
D+ A N L+G + +++DFG+ +++ + + ++ + + +PE F K+D
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDD-QYTSSTGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 433 VFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEGEYDTDQMHRLVL 492
V++FGVL+ E+ + K +R N ++ + + L P L + +
Sbjct: 187 VWSFGVLMWEVFSEGKIPYENRSN----SEVVEDISTGFRLYKPRLASTH-------VYQ 235
Query: 493 IADYCVRQTSAWRPSMSEVLELLTSGHDS 521
I ++C ++ RP+ S +L L +S
Sbjct: 236 IMNHCWKERPEDRPAFSRLLRQLAEIAES 264
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 122/269 (45%), Gaps = 20/269 (7%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + V+ G + K+A+K + F+ E ++ + HP L G C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED---FIEEAEVMMKLSHPKLVQLYGVC 69
Query: 314 IENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHR 372
+E + L+F F ++G L L +R + L V G+ YL + C +IHR
Sbjct: 70 LEQAPICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEAC---VIHR 125
Query: 373 DIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTD 432
D+ A N L+G + +++DFG+ +++ + + ++ + + +PE F K+D
Sbjct: 126 DLAARNCLVGENQVIKVSDFGMTRFVLDD-QYTSSTGTKFPVKWASPEVFSFSRYSSKSD 184
Query: 433 VFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEGEYDTDQMHRLVL 492
V++FGVL+ E+ + K +R N ++ + + L P L + +
Sbjct: 185 VWSFGVLMWEVFSEGKIPYENRSN----SEVVEDISTGFRLYKPRLASTH-------VYQ 233
Query: 493 IADYCVRQTSAWRPSMSEVLELLTSGHDS 521
I ++C ++ RP+ S +L L +S
Sbjct: 234 IMNHCWKERPEDRPAFSRLLRQLAEIAES 262
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 103/226 (45%), Gaps = 28/226 (12%)
Query: 254 VGQGGYSEVYKGNLS------DGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTA 307
+G G + EVY+G +S ++AVK L FLME II + H N
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKLNHQNIV 111
Query: 308 TLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSK-----SLEWPIRYKIVLGVARGLHYL 361
+G +++ +++ G+L + L + R + SL + +A G YL
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 362 HKGCKRRIIHRDIKASNVLL---GPDFEPQITDFGLAKWLPNKCTHH----AAIPIEGTF 414
+ IHRDI A N LL GP +I DFG+A+ + + A +P++
Sbjct: 172 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK--- 225
Query: 415 GYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVL 459
++ PE FM GI KTD ++FGVLL EI + G P S VL
Sbjct: 226 -WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 270
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 80/162 (49%), Gaps = 26/162 (16%)
Query: 303 HPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIR-------------- 347
H N L+G C ++G LY+I ++ GNL L R LE+
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 348 YKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN----KCT 403
VARG+ YL ++ IHRD+ A NVL+ D +I DFGLA+ + + K T
Sbjct: 142 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 198
Query: 404 HHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
+ +P++ ++APE I ++DV++FGVLL EI T
Sbjct: 199 TNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 80/162 (49%), Gaps = 26/162 (16%)
Query: 303 HPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIR-------------- 347
H N L+G C ++G LY+I ++ GNL L R LE+
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 348 YKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN----KCT 403
VARG+ YL ++ IHRD+ A NVL+ D +I DFGLA+ + + K T
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 404 HHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
+ +P++ ++APE I ++DV++FGVLL EI T
Sbjct: 210 TNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 102/226 (45%), Gaps = 28/226 (12%)
Query: 254 VGQGGYSEVYKGNLS------DGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTA 307
+G G + EVY+G +S ++AVK L FLME II H N
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 113
Query: 308 TLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSK-----SLEWPIRYKIVLGVARGLHYL 361
+G +++ +++ G+L + L + R + SL + +A G YL
Sbjct: 114 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 173
Query: 362 HKGCKRRIIHRDIKASNVLL---GPDFEPQITDFGLAKWLPNKCTHH----AAIPIEGTF 414
+ IHRDI A N LL GP +I DFG+A+ + + A +P++
Sbjct: 174 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK--- 227
Query: 415 GYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVL 459
++ PE FM GI KTD ++FGVLL EI + G P S VL
Sbjct: 228 -WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 272
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 125/286 (43%), Gaps = 30/286 (10%)
Query: 244 ATNNFHSENMVGQGGYSEVYKGNL-SDGRKIAVKRLXX-----XXXXXXXXXXFLMELGI 297
A N E +G+GG+ V+KG L D +A+K L F E+ I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 298 IGHVCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARG 357
+ ++ HPN L G + N ++ F G+L L D ++ ++W ++ +++L +A G
Sbjct: 77 MSNLNHPNIVKLYGL-MHNPPRMVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALG 134
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFE-----PQITDFGLAKWLPNKCTHHAAIPIEG 412
+ Y+ + I+HRD+++ N+ L E ++ DFG ++ + H+ + G
Sbjct: 135 IEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQ-----SVHSVSGLLG 188
Query: 413 TFGYLAPEYF--MHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNL 470
F ++APE EK D ++F ++L I+TG P D + + + E G
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEG-- 246
Query: 471 TELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELLT 516
L D RL + + C RP S +++ L+
Sbjct: 247 -------LRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELS 285
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 80/162 (49%), Gaps = 26/162 (16%)
Query: 303 HPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIR-------------- 347
H N L+G C ++G LY+I ++ GNL L R LE+
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 348 YKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN----KCT 403
VARG+ YL ++ IHRD+ A NVL+ D +I DFGLA+ + + K T
Sbjct: 146 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 202
Query: 404 HHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
+ +P++ ++APE I ++DV++FGVLL EI T
Sbjct: 203 TNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 80/162 (49%), Gaps = 26/162 (16%)
Query: 303 HPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIR-------------- 347
H N L+G C ++G LY+I ++ GNL L R LE+
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 348 YKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN----KCT 403
VARG+ YL ++ IHRD+ A NVL+ D +I DFGLA+ + + K T
Sbjct: 145 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 201
Query: 404 HHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
+ +P++ ++APE I ++DV++FGVLL EI T
Sbjct: 202 TNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 102/226 (45%), Gaps = 28/226 (12%)
Query: 254 VGQGGYSEVYKGNLS------DGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTA 307
+G G + EVY+G +S ++AVK L FLME II H N
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 97
Query: 308 TLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSK-----SLEWPIRYKIVLGVARGLHYL 361
+G +++ +++ G+L + L + R + SL + +A G YL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 362 HKGCKRRIIHRDIKASNVLL---GPDFEPQITDFGLAKWLPNKCTHH----AAIPIEGTF 414
+ IHRDI A N LL GP +I DFG+A+ + + A +P++
Sbjct: 158 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK--- 211
Query: 415 GYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVL 459
++ PE FM GI KTD ++FGVLL EI + G P S VL
Sbjct: 212 -WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 256
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 102/226 (45%), Gaps = 28/226 (12%)
Query: 254 VGQGGYSEVYKGNLS------DGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTA 307
+G G + EVY+G +S ++AVK L FLME II H N
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 103
Query: 308 TLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSK-----SLEWPIRYKIVLGVARGLHYL 361
+G +++ +++ G+L + L + R + SL + +A G YL
Sbjct: 104 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 163
Query: 362 HKGCKRRIIHRDIKASNVLL---GPDFEPQITDFGLAKWLPNKCTHH----AAIPIEGTF 414
+ IHRDI A N LL GP +I DFG+A+ + + A +P++
Sbjct: 164 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK--- 217
Query: 415 GYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVL 459
++ PE FM GI KTD ++FGVLL EI + G P S VL
Sbjct: 218 -WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 262
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 80/162 (49%), Gaps = 26/162 (16%)
Query: 303 HPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIR-------------- 347
H N L+G C ++G LY+I ++ GNL L R LE+
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 348 YKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN----KCT 403
VARG+ YL ++ IHRD+ A NVL+ D +I DFGLA+ + + K T
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKT 209
Query: 404 HHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
+ +P++ ++APE I ++DV++FGVLL EI T
Sbjct: 210 TNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 80/162 (49%), Gaps = 26/162 (16%)
Query: 303 HPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIR-------------- 347
H N L+G C ++G LY+I ++ GNL L R LE+
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 348 YKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN----KCT 403
VARG+ YL ++ IHRD+ A NVL+ D +I DFGLA+ + + K T
Sbjct: 194 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 250
Query: 404 HHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
+ +P++ ++APE I ++DV++FGVLL EI T
Sbjct: 251 TNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 120/264 (45%), Gaps = 20/264 (7%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + V+ G + K+A+K + F+ E ++ + HP L G C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDD---FIEEAEVMMKLSHPKLVQLYGVC 91
Query: 314 IENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHR 372
+E + L+F F ++G L L +R + L V G+ YL + C +IHR
Sbjct: 92 LEQAPICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEAC---VIHR 147
Query: 373 DIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTD 432
D+ A N L+G + +++DFG+ +++ + + ++ + + +PE F K+D
Sbjct: 148 DLAARNCLVGENQVIKVSDFGMTRFVLDD-QYTSSTGTKFPVKWASPEVFSFSRYSSKSD 206
Query: 433 VFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEGEYDTDQMHRLVL 492
V++FGVL+ E+ + K +R N ++ + + L P L + +
Sbjct: 207 VWSFGVLMWEVFSEGKIPYENRSN----SEVVEDISTGFRLYKPRLASTH-------VYQ 255
Query: 493 IADYCVRQTSAWRPSMSEVLELLT 516
I ++C ++ RP+ S +L L
Sbjct: 256 IMNHCWKERPEDRPAFSRLLRQLA 279
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 102/226 (45%), Gaps = 28/226 (12%)
Query: 254 VGQGGYSEVYKGNLS------DGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTA 307
+G G + EVY+G +S ++AVK L FLME II H N
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 97
Query: 308 TLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSK-----SLEWPIRYKIVLGVARGLHYL 361
+G +++ +++ G+L + L + R + SL + +A G YL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 362 HKGCKRRIIHRDIKASNVLL---GPDFEPQITDFGLAKWLPNKCTHH----AAIPIEGTF 414
+ IHRDI A N LL GP +I DFG+A+ + + A +P++
Sbjct: 158 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVK--- 211
Query: 415 GYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVL 459
++ PE FM GI KTD ++FGVLL EI + G P S VL
Sbjct: 212 -WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 256
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 102/226 (45%), Gaps = 28/226 (12%)
Query: 254 VGQGGYSEVYKGNLS------DGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTA 307
+G G + EVY+G +S ++AVK L FLME II H N
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 137
Query: 308 TLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSK-----SLEWPIRYKIVLGVARGLHYL 361
+G +++ +++ G+L + L + R + SL + +A G YL
Sbjct: 138 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197
Query: 362 HKGCKRRIIHRDIKASNVLL---GPDFEPQITDFGLAKWLPNKCTHH----AAIPIEGTF 414
+ IHRDI A N LL GP +I DFG+A+ + + A +P++
Sbjct: 198 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK--- 251
Query: 415 GYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVL 459
++ PE FM GI KTD ++FGVLL EI + G P S VL
Sbjct: 252 -WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 296
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 102/226 (45%), Gaps = 28/226 (12%)
Query: 254 VGQGGYSEVYKGNLS------DGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTA 307
+G G + EVY+G +S ++AVK L FLME II H N
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELD-FLMEALIISKFNHQNIV 111
Query: 308 TLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSK-----SLEWPIRYKIVLGVARGLHYL 361
+G +++ +++ G+L + L + R + SL + +A G YL
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 362 HKGCKRRIIHRDIKASNVLL---GPDFEPQITDFGLAKWLPNKCTHH----AAIPIEGTF 414
+ IHRDI A N LL GP +I DFG+A+ + + A +P++
Sbjct: 172 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK--- 225
Query: 415 GYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVL 459
++ PE FM GI KTD ++FGVLL EI + G P S VL
Sbjct: 226 -WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 270
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 125/286 (43%), Gaps = 30/286 (10%)
Query: 244 ATNNFHSENMVGQGGYSEVYKGNL-SDGRKIAVKRLXX-----XXXXXXXXXXFLMELGI 297
A N E +G+GG+ V+KG L D +A+K L F E+ I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 298 IGHVCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARG 357
+ ++ HPN L G + N ++ F G+L L D ++ ++W ++ +++L +A G
Sbjct: 77 MSNLNHPNIVKLYGL-MHNPPRMVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALG 134
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFE-----PQITDFGLAKWLPNKCTHHAAIPIEG 412
+ Y+ + I+HRD+++ N+ L E ++ DF L++ + H+ + G
Sbjct: 135 IEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQ-----SVHSVSGLLG 188
Query: 413 TFGYLAPEYF--MHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNL 470
F ++APE EK D ++F ++L I+TG P D + + + E G
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEG-- 246
Query: 471 TELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELLT 516
L D RL + + C RP S +++ L+
Sbjct: 247 -------LRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELS 285
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 102/226 (45%), Gaps = 28/226 (12%)
Query: 254 VGQGGYSEVYKGNLS------DGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTA 307
+G G + EVY+G +S ++AVK L FLME II H N
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 114
Query: 308 TLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSK-----SLEWPIRYKIVLGVARGLHYL 361
+G +++ +++ G+L + L + R + SL + +A G YL
Sbjct: 115 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 174
Query: 362 HKGCKRRIIHRDIKASNVLL---GPDFEPQITDFGLAKWLPNKCTHH----AAIPIEGTF 414
+ IHRDI A N LL GP +I DFG+A+ + + A +P++
Sbjct: 175 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK--- 228
Query: 415 GYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVL 459
++ PE FM GI KTD ++FGVLL EI + G P S VL
Sbjct: 229 -WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 273
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 102/226 (45%), Gaps = 28/226 (12%)
Query: 254 VGQGGYSEVYKGNLS------DGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTA 307
+G G + EVY+G +S ++AVK L FLME II H N
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 96
Query: 308 TLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSK-----SLEWPIRYKIVLGVARGLHYL 361
+G +++ +++ G+L + L + R + SL + +A G YL
Sbjct: 97 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 362 HKGCKRRIIHRDIKASNVLL---GPDFEPQITDFGLAKWLPNKCTHH----AAIPIEGTF 414
+ IHRDI A N LL GP +I DFG+A+ + + A +P++
Sbjct: 157 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK--- 210
Query: 415 GYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVL 459
++ PE FM GI KTD ++FGVLL EI + G P S VL
Sbjct: 211 -WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 255
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 102/226 (45%), Gaps = 28/226 (12%)
Query: 254 VGQGGYSEVYKGNLS------DGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTA 307
+G G + EVY+G +S ++AVK L FLME II H N
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 96
Query: 308 TLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSK-----SLEWPIRYKIVLGVARGLHYL 361
+G +++ +++ G+L + L + R + SL + +A G YL
Sbjct: 97 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 362 HKGCKRRIIHRDIKASNVLL---GPDFEPQITDFGLAKWLPNKCTHH----AAIPIEGTF 414
+ IHRDI A N LL GP +I DFG+A+ + + A +P++
Sbjct: 157 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK--- 210
Query: 415 GYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVL 459
++ PE FM GI KTD ++FGVLL EI + G P S VL
Sbjct: 211 -WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 255
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 141/303 (46%), Gaps = 49/303 (16%)
Query: 237 SYEEISSATNNFHSE---------NMVGQGGYSEVYKGNLS-DGRK---IAVKRLXXXXX 283
+YE+ + A + F E ++G G + EV G L G++ +A+K L
Sbjct: 25 TYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYT 84
Query: 284 XXXXXXXFLMELGIIGHVCHPNTATLVGCCIENG-LYLIFNFSQNGNLDAAL--HDERSK 340
FL E I+G HPN L G + ++ F +NG LDA L HD +
Sbjct: 85 EKQRRD-FLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFT 143
Query: 341 SLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN 400
++ ++ G+A G+ YL +HRD+ A N+L+ + +++DFGL++ + +
Sbjct: 144 VIQL---VGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIED 197
Query: 401 K-----CTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPV-DSS 453
T IP+ T APE + +DV+++G+++ E+++ G +P D S
Sbjct: 198 DPEAVYTTTGGKIPVRWT----APEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS 253
Query: 454 RQNLVLWAKPLMESGNLTELVD-PSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVL 512
Q+++ K + E L +D P+ +H+L+L C ++ A RP +++
Sbjct: 254 NQDVI---KAIEEGYRLPAPMDCPA--------GLHQLMLD---CWQKERAERPKFEQIV 299
Query: 513 ELL 515
+L
Sbjct: 300 GIL 302
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKI----AVKRLXXXXXXXXXXXXFLMELGIIGH 300
F ++G G + VYKG + +G K+ A+K L L E ++
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE-ILDEAYVMAS 70
Query: 301 VCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKS-----LEWPIRYKIVLGVA 355
V +P+ L+G C+ + + LI G L + + + L W ++ +A
Sbjct: 71 VDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 124
Query: 356 RGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL-PNKCTHHA---AIPIE 411
G++YL RR++HRD+ A NVL+ +ITDFGLAK L + +HA +PI+
Sbjct: 125 EGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 181
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVD 451
++A E +H I ++DV+++GV + E++T G KP D
Sbjct: 182 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 102/226 (45%), Gaps = 28/226 (12%)
Query: 254 VGQGGYSEVYKGNLS------DGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTA 307
+G G + EVY+G +S ++AVK L FLME II H N
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 111
Query: 308 TLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSK-----SLEWPIRYKIVLGVARGLHYL 361
+G +++ +++ G+L + L + R + SL + +A G YL
Sbjct: 112 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 362 HKGCKRRIIHRDIKASNVLL---GPDFEPQITDFGLAKWLPNKCTHH----AAIPIEGTF 414
+ IHRDI A N LL GP +I DFG+A+ + + A +P++
Sbjct: 172 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK--- 225
Query: 415 GYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVL 459
++ PE FM GI KTD ++FGVLL EI + G P S VL
Sbjct: 226 -WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 270
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 86/162 (53%), Gaps = 26/162 (16%)
Query: 303 HPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWP----------IRYKIV 351
H N TL+G C ++G LY+I ++ GNL L R +E+ + +K +
Sbjct: 100 HKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 352 LG----VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN----KCT 403
+ +ARG+ YL ++ IHRD+ A NVL+ + +I DFGLA+ + N K T
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 404 HHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
+ +P++ ++APE + ++DV++FGVL+ EI T
Sbjct: 217 TNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 102/226 (45%), Gaps = 28/226 (12%)
Query: 254 VGQGGYSEVYKGNLS------DGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTA 307
+G G + EVY+G +S ++AVK L FLME II H N
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 88
Query: 308 TLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSK-----SLEWPIRYKIVLGVARGLHYL 361
+G +++ +++ G+L + L + R + SL + +A G YL
Sbjct: 89 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 148
Query: 362 HKGCKRRIIHRDIKASNVLL---GPDFEPQITDFGLAKWLPNKCTHH----AAIPIEGTF 414
+ IHRDI A N LL GP +I DFG+A+ + + A +P++
Sbjct: 149 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK--- 202
Query: 415 GYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVL 459
++ PE FM GI KTD ++FGVLL EI + G P S VL
Sbjct: 203 -WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 247
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKI----AVKRLXXXXXXXXXXXXFLMELGIIGH 300
F ++ G + VYKG + +G K+ A+K L L E ++
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE-ILDEAYVMAS 80
Query: 301 VCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKS-----LEWPIRYKIVLGVA 355
V +P+ L+G C+ + + LI G L + + + L W ++ +A
Sbjct: 81 VDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 134
Query: 356 RGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL-PNKCTHHA---AIPIE 411
+G++YL RR++HRD+ A NVL+ +ITDFGLAK L + +HA +PI+
Sbjct: 135 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVD 451
++A E +H I ++DV+++GV + E++T G KP D
Sbjct: 192 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
VG+G Y VYK S GR +A+KR+ + E+ ++ + HPN +L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 314 -IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVL-GVARGLHYLHKGCKRRIIH 371
E L L+F F + +L L DE L+ + KI L + RG+ + H + RI+H
Sbjct: 89 HSERCLTLVFEFMEK-DLKKVL-DENKTGLQ-DSQIKIYLYQLLRGVAHCH---QHRILH 142
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAPEYFM-HGIID 428
RD+K N+L+ D ++ DFGLA+ +P + H + T Y AP+ M
Sbjct: 143 RDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV----TLWYRAPDVLMGSKKYS 198
Query: 429 EKTDVFAFGVLLLEIITGR 447
D+++ G + E+ITG+
Sbjct: 199 TSVDIWSIGCIFAEMITGK 217
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
VG+G Y VYK S GR +A+KR+ + E+ ++ + HPN +L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 314 -IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVL-GVARGLHYLHKGCKRRIIH 371
E L L+F F + +L L DE L+ + KI L + RG+ + H + RI+H
Sbjct: 89 HSERCLTLVFEFMEK-DLKKVL-DENKTGLQ-DSQIKIYLYQLLRGVAHCH---QHRILH 142
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAPEYFM-HGIID 428
RD+K N+L+ D ++ DFGLA+ +P + H + T Y AP+ M
Sbjct: 143 RDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV----TLWYRAPDVLMGSKKYS 198
Query: 429 EKTDVFAFGVLLLEIITGR 447
D+++ G + E+ITG+
Sbjct: 199 TSVDIWSIGCIFAEMITGK 217
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 94/201 (46%), Gaps = 15/201 (7%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + EV+ G ++ K+AVK L FL E ++ + H L
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA---FLEEANLMKTLQHDKLVRLYAVV 77
Query: 314 I-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHR 372
E +Y+I + G+L L + + P +A G+ Y+ + + IHR
Sbjct: 78 TREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHR 134
Query: 373 DIKASNVLLGPDFEPQITDFGLAKWLPNK---CTHHAAIPIEGTFGYLAPEYFMHGIIDE 429
D++A+NVL+ +I DFGLA+ + + A PI+ T APE G
Sbjct: 135 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWT----APEAINFGCFTI 190
Query: 430 KTDVFAFGVLLLEIIT-GRKP 449
K+DV++FG+LL EI+T G+ P
Sbjct: 191 KSDVWSFGILLYEIVTYGKIP 211
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 80/162 (49%), Gaps = 26/162 (16%)
Query: 303 HPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIR-------------- 347
H N L+G C ++G LY+I ++ GNL L R LE+
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 348 YKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN----KCT 403
VARG+ YL ++ IHRD+ A NVL+ D +I DFGLA+ + + K T
Sbjct: 138 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 194
Query: 404 HHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
+ +P++ ++APE I ++DV++FGVLL EI T
Sbjct: 195 TNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 80/162 (49%), Gaps = 26/162 (16%)
Query: 303 HPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIR-------------- 347
H N L+G C ++G LY+I ++ GNL L R LE+
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 348 YKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN----KCT 403
VARG+ YL ++ IHRD+ A NVL+ D +I DFGLA+ + + K T
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 404 HHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
+ +P++ ++APE I ++DV++FGVLL EI T
Sbjct: 210 TNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKI----AVKRLXXXXXXXXXXXXFLMELGIIGH 300
F ++G G + VYKG + +G K+ A+K L L E ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE-ILDEAYVMAS 75
Query: 301 VCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKS-----LEWPIRYKIVLGVA 355
V +P+ L+G C+ + + LI G L + + + L W ++ +A
Sbjct: 76 VDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 129
Query: 356 RGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL-PNKCTHHA---AIPIE 411
+G++YL RR++HRD+ A NVL+ +ITDFG AK L + +HA +PI+
Sbjct: 130 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVD 451
++A E +H I ++DV+++GV + E++T G KP D
Sbjct: 187 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKI----AVKRLXXXXXXXXXXXXFLMELGIIGH 300
F ++G G + VYKG + +G K+ A+K L L E ++
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE-ILDEAYVMAS 77
Query: 301 VCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKS-----LEWPIRYKIVLGVA 355
V +P+ L+G C+ + + LI G L + + + L W ++ +A
Sbjct: 78 VDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 131
Query: 356 RGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL-PNKCTHHA---AIPIE 411
+G++YL RR++HRD+ A NVL+ +ITDFG AK L + +HA +PI+
Sbjct: 132 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 188
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVD 451
++A E +H I ++DV+++GV + E++T G KP D
Sbjct: 189 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKI----AVKRLXXXXXXXXXXXXFLMELGIIGH 300
F ++G G + VYKG + +G K+ A+K L L E ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE-ILDEAYVMAS 75
Query: 301 VCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKS-----LEWPIRYKIVLGVA 355
V +P+ L+G C+ + + LI G L + + + L W ++ +A
Sbjct: 76 VDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 129
Query: 356 RGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL-PNKCTHHA---AIPIE 411
+G++YL RR++HRD+ A NVL+ +ITDFG AK L + +HA +PI+
Sbjct: 130 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVD 451
++A E +H I ++DV+++GV + E++T G KP D
Sbjct: 187 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 94/207 (45%), Gaps = 14/207 (6%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + EV+ G ++ K+AVK L FL E ++ + H L
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA---FLEEANLMKTLQHDKLVRLYAVV 76
Query: 314 I-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHR 372
E +Y+I F G+L L + + P +A G+ Y+ + + IHR
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHR 133
Query: 373 DIKASNVLLGPDFEPQITDFGLAKWLPNK---CTHHAAIPIEGTFGYLAPEYFMHGIIDE 429
D++A+NVL+ +I DFGLA+ + + A PI+ T APE G
Sbjct: 134 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWT----APEAINFGCFTI 189
Query: 430 KTDVFAFGVLLLEIITGRKPVDSSRQN 456
K++V++FG+LL EI+T K R N
Sbjct: 190 KSNVWSFGILLYEIVTYGKIPYPGRTN 216
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 122/268 (45%), Gaps = 28/268 (10%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + VYKG +AVK L F E+ ++ H N +G
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM 101
Query: 314 IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRD 373
++ L ++ + + +L LH + +K + + I A+G+ YLH + IIHRD
Sbjct: 102 TKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQL-IDIARQTAQGMDYLHA---KNIIHRD 157
Query: 374 IKASNVLLGPDFEPQITDFGLA----KWLPNKCTHHAAIPIEGTFGYLAPEYFM---HGI 426
+K++N+ L +I DFGLA +W ++ G+ ++APE +
Sbjct: 158 MKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPT----GSVLWMAPEVIRMQDNNP 213
Query: 427 IDEKTDVFAFGVLLLEIITGRKPVD--SSRQNLVLWAKPLMESGNLTELVDPSLEGEYDT 484
++DV+++G++L E++TG P ++R ++ S +L++L +
Sbjct: 214 FSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKA---- 269
Query: 485 DQMHRLVLIADYCVRQTSAWRPSMSEVL 512
M RLV AD CV++ RP ++L
Sbjct: 270 --MKRLV--AD-CVKKVKEERPLFPQIL 292
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 141/303 (46%), Gaps = 47/303 (15%)
Query: 236 FSYEEISSATNNFHSE---------NMVGQGGYSEVYKGNLS-DGRK---IAVKRLXXXX 282
F++E+ + A F E ++G G + EV G L G++ +A+K L
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 283 XXXXXXXXFLMELGIIGHVCHPNTATLVGCCIE-NGLYLIFNFSQNGNLDAAL--HDERS 339
FL E I+G HPN L G + + +I + +NG+LDA L +D R
Sbjct: 70 TDKQRRD-FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRF 128
Query: 340 KSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLP 399
++ ++ G+ G+ YL +HRD+ A N+L+ + +++DFG+++ L
Sbjct: 129 TVIQL---VGMLRGIGSGMKYLSD---MSAVHRDLAARNILVNSNLVCKVSDFGMSRVLE 182
Query: 400 NK-----CTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPV-DS 452
+ T IPI T APE + +DV+++G+++ E+++ G +P D
Sbjct: 183 DDPEAAYTTRGGKIPIRWT----APEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 238
Query: 453 SRQNLVLWAKPLMESGNLTELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVL 512
S Q+++ K + E L +D + +H+L+L C ++ + RP +++
Sbjct: 239 SNQDVI---KAIEEGYRLPPPMDCPI-------ALHQLML---DCWQKERSDRPKFGQIV 285
Query: 513 ELL 515
+L
Sbjct: 286 NML 288
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKI----AVKRLXXXXXXXXXXXXFLMELGIIGH 300
F ++G G + VYKG + +G K+ A+ L L E ++
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKE-ILDEAYVMAS 107
Query: 301 VCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKS-----LEWPIRYKIVLGVA 355
V +P+ L+G C+ + + LI G L + + + L W ++ +A
Sbjct: 108 VDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 161
Query: 356 RGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL-PNKCTHHA---AIPIE 411
+G++YL RR++HRD+ A NVL+ +ITDFGLAK L + +HA +PI+
Sbjct: 162 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 218
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVD 451
++A E +H I ++DV+++GV + E++T G KP D
Sbjct: 219 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 121/269 (44%), Gaps = 20/269 (7%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + V+ G + K+A+K + F+ E ++ + HP L G C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED---FIEEAEVMMKLSHPKLVQLYGVC 72
Query: 314 IENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHR 372
+E + L+ F ++G L L +R + L V G+ YL + C +IHR
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEAC---VIHR 128
Query: 373 DIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTD 432
D+ A N L+G + +++DFG+ +++ + + ++ + + +PE F K+D
Sbjct: 129 DLAARNCLVGENQVIKVSDFGMTRFVLDD-QYTSSTGTKFPVKWASPEVFSFSRYSSKSD 187
Query: 433 VFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEGEYDTDQMHRLVL 492
V++FGVL+ E+ + K +R N ++ + + L P L + +
Sbjct: 188 VWSFGVLMWEVFSEGKIPYENRSN----SEVVEDISTGFRLYKPRLASTH-------VYQ 236
Query: 493 IADYCVRQTSAWRPSMSEVLELLTSGHDS 521
I ++C R+ RP+ S +L L +S
Sbjct: 237 IMNHCWRERPEDRPAFSRLLRQLAEIAES 265
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 122/253 (48%), Gaps = 48/253 (18%)
Query: 221 GSLSNKEKHQPLLTCFSYEEISSATNNFHSENMVGQGGYSEVYKGNLS-DGRKI--AVKR 277
G+L+ K K+ P T + + N+ ++++G+G + +V K + DG ++ A+KR
Sbjct: 1 GALNRKVKNNPDPTIYPVLD----WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKR 56
Query: 278 LXXXXXXXXXXXXFLMELGII---GHVCHPNTATLVGCCIENG-LYLIFNFSQNGNLDAA 333
+ F EL ++ GH HPN L+G C G LYL ++ +GNL
Sbjct: 57 MKEYASKDDHRD-FAGELEVLCKLGH--HPNIINLLGACEHRGYLYLAIEYAPHGNLLDF 113
Query: 334 LHDERSKSLEWPIRYKIV----------------LGVARGLHYLHKGCKRRIIHRDIKAS 377
L +S+ LE + I VARG+ YL + ++ IHR++ A
Sbjct: 114 LR--KSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRNLAAR 168
Query: 378 NVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFG-----YLAPEYFMHGIIDEKTD 432
N+L+G ++ +I DFGL++ + ++ T G ++A E + + +D
Sbjct: 169 NILVGENYVAKIADFGLSR--------GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSD 220
Query: 433 VFAFGVLLLEIIT 445
V+++GVLL EI++
Sbjct: 221 VWSYGVLLWEIVS 233
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKI----AVKRLXXXXXXXXXXXXFLMELGIIGH 300
F ++ G + VYKG + +G K+ A+K L L E ++
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE-ILDEAYVMAS 80
Query: 301 VCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKS-----LEWPIRYKIVLGVA 355
V +P+ L+G C+ + + LI G L + + + L W ++ +A
Sbjct: 81 VDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 134
Query: 356 RGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL-PNKCTHHA---AIPIE 411
+G++YL RR++HRD+ A NVL+ +ITDFGLAK L + +HA +PI+
Sbjct: 135 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVD 451
++A E +H I ++DV+++GV + E++T G KP D
Sbjct: 192 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKI----AVKRLXXXXXXXXXXXXFLMELGIIGH 300
F ++ G + VYKG + +G K+ A+K L L E ++
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE-ILDEAYVMAS 73
Query: 301 VCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKS-----LEWPIRYKIVLGVA 355
V +P+ L+G C+ + + LI G L + + + L W ++ +A
Sbjct: 74 VDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 127
Query: 356 RGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL-PNKCTHHA---AIPIE 411
+G++YL RR++HRD+ A NVL+ +ITDFGLAK L + +HA +PI+
Sbjct: 128 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVD 451
++A E +H I ++DV+++GV + E++T G KP D
Sbjct: 185 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 111/228 (48%), Gaps = 44/228 (19%)
Query: 246 NNFHSENMVGQGGYSEVYKGNLS-DGRKI--AVKRLXXXXXXXXXXXXFLMELGII---G 299
N+ ++++G+G + +V K + DG ++ A+KR+ F EL ++ G
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRD-FAGELEVLCKLG 83
Query: 300 HVCHPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV------- 351
H HPN L+G C G LYL ++ +GNL L +S+ LE + I
Sbjct: 84 H--HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLR--KSRVLETDPAFAIANSTASTL 139
Query: 352 ---------LGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKC 402
VARG+ YL + ++ IHRD+ A N+L+G ++ +I DFGL++
Sbjct: 140 SSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR------ 190
Query: 403 THHAAIPIEGTFG-----YLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
+ ++ T G ++A E + + +DV+++GVLL EI++
Sbjct: 191 --GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKI----AVKRLXXXXXXXXXXXXFLMELGIIGH 300
F ++G G + VYKG + +G K+ A+K L L E ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE-ILDEAYVMAS 75
Query: 301 VCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKS-----LEWPIRYKIVLGVA 355
V +P+ L+G C+ + + LI G L + + + L W ++ +A
Sbjct: 76 VDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 129
Query: 356 RGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL-PNKCTHHA---AIPIE 411
+G++YL RR++HRD+ A NVL+ +ITDFG AK L + +HA +PI+
Sbjct: 130 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVD 451
++A E +H I ++DV+++GV + E++T G KP D
Sbjct: 187 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 111/228 (48%), Gaps = 44/228 (19%)
Query: 246 NNFHSENMVGQGGYSEVYKGNLS-DGRKI--AVKRLXXXXXXXXXXXXFLMELGII---G 299
N+ ++++G+G + +V K + DG ++ A+KR+ F EL ++ G
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRD-FAGELEVLCKLG 73
Query: 300 HVCHPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV------- 351
H HPN L+G C G LYL ++ +GNL L +S+ LE + I
Sbjct: 74 H--HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLR--KSRVLETDPAFAIANSTASTL 129
Query: 352 ---------LGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKC 402
VARG+ YL + ++ IHRD+ A N+L+G ++ +I DFGL++
Sbjct: 130 SSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR------ 180
Query: 403 THHAAIPIEGTFG-----YLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
+ ++ T G ++A E + + +DV+++GVLL EI++
Sbjct: 181 --GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKI----AVKRLXXXXXXXXXXXXFLMELGIIGH 300
F ++G G + VYKG + +G K+ A+K L L E ++
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE-ILDEAYVMAS 80
Query: 301 VCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKS-----LEWPIRYKIVLGVA 355
V +P+ L+G C+ + + LI G L + + + L W ++ +A
Sbjct: 81 VDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 134
Query: 356 RGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL-PNKCTHHA---AIPIE 411
+G++YL RR++HRD+ A NVL+ +ITDFG AK L + +HA +PI+
Sbjct: 135 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 191
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVD 451
++A E +H I ++DV+++GV + E++T G KP D
Sbjct: 192 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 120/242 (49%), Gaps = 24/242 (9%)
Query: 236 FSYEEISSATNNFHSE---------NMVGQGGYSEVYKGNLS-DGRK---IAVKRLXXXX 282
F++E+ + A F E ++G G + EV G+L G++ +A+K L
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 283 XXXXXXXXFLMELGIIGHVCHPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKS 341
FL E I+G HPN L G ++ + +I F +NG+LD+ L +
Sbjct: 74 TEKQRRD-FLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQF 132
Query: 342 LEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNK 401
+ ++ G+A G+ YL +HRD+ A N+L+ + +++DFGL+++L +
Sbjct: 133 TVIQL-VGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 188
Query: 402 C---THHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPV-DSSRQN 456
T+ +A+ + + APE + +DV+++G+++ E+++ G +P D + Q+
Sbjct: 189 TSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQD 248
Query: 457 LV 458
++
Sbjct: 249 VI 250
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKI----AVKRLXXXXXXXXXXXXFLMELGIIGH 300
F ++G G + VYKG + +G K+ A+K L L E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE-ILDEAYVMAS 73
Query: 301 VCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKS-----LEWPIRYKIVLGVA 355
V +P+ L+G C+ + + LI G L + + + L W ++ +A
Sbjct: 74 VDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 127
Query: 356 RGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL-PNKCTHHA---AIPIE 411
+G++YL RR++HRD+ A NVL+ +ITDFG AK L + +HA +PI+
Sbjct: 128 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 184
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVD 451
++A E +H I ++DV+++GV + E++T G KP D
Sbjct: 185 ----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 79/162 (48%), Gaps = 26/162 (16%)
Query: 303 HPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIR-------------- 347
H N L+G C ++G LY+I ++ GNL L LE+
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 348 YKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN----KCT 403
VARG+ YL ++ IHRD+ A NVL+ D +I DFGLA+ + + K T
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 404 HHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
+ +P++ ++APE I ++DV++FGVLL EI T
Sbjct: 210 TNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 116/267 (43%), Gaps = 21/267 (7%)
Query: 248 FHSENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTA 307
F +G+G + EV+KG + +K+ ++ E+ ++ P
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 308 TLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCK 366
G +++ L++I + G +AL L+ I+ + +GL YLH K
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGG---SALDLLEPGPLDETQIATILREILKGLDYLHSEKK 140
Query: 367 RRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGI 426
IHRDIKA+NVLL E ++ DFG+A L + T GT ++APE
Sbjct: 141 ---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNXFVGTPFWMAPEVIKQSA 195
Query: 427 IDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEGEYDTDQ 486
D K D+++ G+ +E+ G P VL+ L+ N P+LEG Y
Sbjct: 196 YDSKADIWSLGITAIELARGEPPHSELHPMKVLF---LIPKNN-----PPTLEGNYSKP- 246
Query: 487 MHRLVLIADYCVRQTSAWRPSMSEVLE 513
L + C+ + ++RP+ E+L+
Sbjct: 247 ---LKEFVEACLNKEPSFRPTAKELLK 270
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 114/273 (41%), Gaps = 25/273 (9%)
Query: 244 ATNNFHSENMVGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLM-ELGIIGHV 301
A +F +G+G + VY + I A+K L L E+ I H+
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 302 CHPNTATLVGCCIE-NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHY 360
HPN L G + +YLI ++ G + L + Y + +A L Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATY--ITELANALSY 128
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
H +R+IHRDIK N+LLG E +I DFG + P+ + GT YL PE
Sbjct: 129 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXXLXGTLDYLPPE 181
Query: 421 YFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEG 480
+ DEK D+++ GVL E + G+ P +++ + + + E P
Sbjct: 182 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT------YQETYKRISRVEFTFPDFVT 235
Query: 481 EYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLE 513
E D + RL ++ + RP + EVLE
Sbjct: 236 EGARDLISRL-------LKHNPSQRPMLREVLE 261
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 116/267 (43%), Gaps = 21/267 (7%)
Query: 248 FHSENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTA 307
F +G+G + EV+KG + +K+ ++ E+ ++ P
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 308 TLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCK 366
G +++ L++I + G +AL L+ I+ + +GL YLH K
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGG---SALDLLEPGPLDETQIATILREILKGLDYLHSEKK 125
Query: 367 RRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGI 426
IHRDIKA+NVLL E ++ DFG+A L + T GT ++APE
Sbjct: 126 ---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNTFVGTPFWMAPEVIKQSA 180
Query: 427 IDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEGEYDTDQ 486
D K D+++ G+ +E+ G P VL+ L+ N P+LEG Y
Sbjct: 181 YDSKADIWSLGITAIELARGEPPHSELHPMKVLF---LIPKNN-----PPTLEGNYSKP- 231
Query: 487 MHRLVLIADYCVRQTSAWRPSMSEVLE 513
L + C+ + ++RP+ E+L+
Sbjct: 232 ---LKEFVEACLNKEPSFRPTAKELLK 255
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 17/221 (7%)
Query: 239 EEISSATNNFHSENMVGQGGYSEVYKGNLS--DGR--KIAVKRLXXXXXXXXXXXXFLME 294
E++ N ++G+G + V +GNL DG K+AVK + FL E
Sbjct: 27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSE 86
Query: 295 LGIIGHVCHPNTATLVGCCIE---NGL---YLIFNFSQNGNLDAALHDER----SKSLEW 344
+ HPN L+G CIE G+ +I F + G+L L R K +
Sbjct: 87 AACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPL 146
Query: 345 PIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTH 404
K ++ +A G+ YL R +HRD+ A N +L D + DFGL+K + + +
Sbjct: 147 QTLLKFMVDIALGMEYLSN---RNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYY 203
Query: 405 HAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
+ ++A E + K+DV+AFGV + EI T
Sbjct: 204 RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 111/254 (43%), Gaps = 38/254 (14%)
Query: 241 ISSATN------NFHSENMVGQGGYSEV-YKGNLSDGRKIAVKRLXXXXXXXXXXXXFLM 293
I+SAT+ N+ + +G+G +++V ++ GR++AVK +
Sbjct: 4 ITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR 63
Query: 294 ELGIIGHVCHPNTATLVGCC-IENGLYLIFNFSQNGNL-DAALHDERSKSLEWPIRYKIV 351
E+ I+ + HPN L E LYL+ ++ G + D + R K E +++ +
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 123
Query: 352 LGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLP--NKCTHHAAIP 409
+ + H ++ I+HRD+KA N+LL D +I DFG + NK P
Sbjct: 124 VSAVQYCH------QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSP 177
Query: 410 IEGTFGYLAPEYFMHGIID-EKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESG 468
Y APE F D + DV++ GV+L +++G P D
Sbjct: 178 -----PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ--------------- 217
Query: 469 NLTELVDPSLEGEY 482
NL EL + L G+Y
Sbjct: 218 NLKELRERVLRGKY 231
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 85/162 (52%), Gaps = 26/162 (16%)
Query: 303 HPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWP----------IRYKIV 351
H N L+G C ++G LY+I ++ GNL L R +E+ + +K +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 352 LG----VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN----KCT 403
+ +ARG+ YL ++ IHRD+ A NVL+ + +I DFGLA+ + N K T
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT 216
Query: 404 HHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
+ +P++ ++APE + ++DV++FGVL+ EI T
Sbjct: 217 TNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 134/286 (46%), Gaps = 43/286 (15%)
Query: 254 VGQGGYSEVYKGN------LSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHP-NT 306
+G+G + +V + + + R +AVK L + EL I+ H+ H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA-LMSELKILIHIGHHLNV 93
Query: 307 ATLVGCCIENG--LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLG----------V 354
L+G C + G L +I F + GNL L +R++ + + YK L V
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQV 153
Query: 355 ARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTH----HAAIPI 410
A+G+ +L R+ IHRD+ A N+LL +I DFGLA+ + + A +P+
Sbjct: 154 AKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPL 210
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGN 469
+ ++APE + ++DV++FGVLL EI + G P + + + ++ G
Sbjct: 211 K----WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRR--LKEG- 263
Query: 470 LTELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELL 515
T + P +Y T +M++ +L C + RP+ SE++E L
Sbjct: 264 -TRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHL 301
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 16/199 (8%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G+G + +V G+ G K+AVK + FL E ++ + H N L+G
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA----FLAEASVMTQLRHSNLVQLLGVI 74
Query: 314 IE--NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
+E GLY++ + G+L L L K L V + YL +H
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVH 131
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKT 431
RD+ A NVL+ D +++DFGL K + +P++ T APE K+
Sbjct: 132 RDLAARNVLVSEDNVAKVSDFGLTK-EASSTQDTGKLPVKWT----APEALREAAFSTKS 186
Query: 432 DVFAFGVLLLEIIT-GRKP 449
DV++FG+LL EI + GR P
Sbjct: 187 DVWSFGILLWEIYSFGRVP 205
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 85/162 (52%), Gaps = 26/162 (16%)
Query: 303 HPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWP----------IRYKIV 351
H N L+G C ++G LY+I ++ GNL L R +E+ + +K +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 352 LG----VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN----KCT 403
+ +ARG+ YL ++ IHRD+ A NVL+ + +I DFGLA+ + N K T
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNT 216
Query: 404 HHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
+ +P++ ++APE + ++DV++FGVL+ EI T
Sbjct: 217 TNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 85/162 (52%), Gaps = 26/162 (16%)
Query: 303 HPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWP----------IRYKIV 351
H N L+G C ++G LY+I ++ GNL L R +E+ + +K +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 352 LG----VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN----KCT 403
+ +ARG+ YL ++ IHRD+ A NVL+ + +I DFGLA+ + N K T
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 404 HHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
+ +P++ ++APE + ++DV++FGVL+ EI T
Sbjct: 217 TNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 85/162 (52%), Gaps = 26/162 (16%)
Query: 303 HPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWP----------IRYKIV 351
H N L+G C ++G LY+I ++ GNL L R +E+ + +K +
Sbjct: 146 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 205
Query: 352 LG----VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN----KCT 403
+ +ARG+ YL ++ IHRD+ A NVL+ + +I DFGLA+ + N K T
Sbjct: 206 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 262
Query: 404 HHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
+ +P++ ++APE + ++DV++FGVL+ EI T
Sbjct: 263 TNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 116/267 (43%), Gaps = 21/267 (7%)
Query: 248 FHSENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTA 307
F +G+G + EV+KG + +K+ ++ E+ ++ P
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 308 TLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCK 366
G +++ L++I + G +AL L+ I+ + +GL YLH K
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGG---SALDLLEPGPLDETQIATILREILKGLDYLHSEKK 145
Query: 367 RRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGI 426
IHRDIKA+NVLL E ++ DFG+A L + T GT ++APE
Sbjct: 146 ---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNTFVGTPFWMAPEVIKQSA 200
Query: 427 IDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEGEYDTDQ 486
D K D+++ G+ +E+ G P VL+ L+ N P+LEG Y
Sbjct: 201 YDSKADIWSLGITAIELARGEPPHSELHPMKVLF---LIPKNN-----PPTLEGNYS--- 249
Query: 487 MHRLVLIADYCVRQTSAWRPSMSEVLE 513
L + C+ + ++RP+ E+L+
Sbjct: 250 -KPLKEFVEACLNKEPSFRPTAKELLK 275
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 7/194 (3%)
Query: 254 VGQGGYSEVYKGNL-SDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G+G + EV+ G L +D +AVK FL E I+ HPN L+G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAK-FLQEARILKQYSHPNIVRLIGV 180
Query: 313 CIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
C + +Y++ Q G+ L E ++ L ++V A G+ YL C IH
Sbjct: 181 CTQKQPIYIVMELVQGGDFLTFLRTEGAR-LRVKTLLQMVGDAAAGMEYLESKC---CIH 236
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKT 431
RD+ A N L+ +I+DFG+++ + + + + APE +G ++
Sbjct: 237 RDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSES 296
Query: 432 DVFAFGVLLLEIIT 445
DV++FG+LL E +
Sbjct: 297 DVWSFGILLWETFS 310
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 85/162 (52%), Gaps = 26/162 (16%)
Query: 303 HPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWP----------IRYKIV 351
H N L+G C ++G LY+I ++ GNL L R +E+ + +K +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 352 LG----VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN----KCT 403
+ +ARG+ YL ++ IHRD+ A NVL+ + +I DFGLA+ + N K T
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKT 216
Query: 404 HHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
+ +P++ ++APE + ++DV++FGVL+ EI T
Sbjct: 217 TNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 85/162 (52%), Gaps = 26/162 (16%)
Query: 303 HPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWP----------IRYKIV 351
H N L+G C ++G LY+I ++ GNL L R +E+ + +K +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 352 LG----VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN----KCT 403
+ +ARG+ YL ++ IHRD+ A NVL+ + +I DFGLA+ + N K T
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 404 HHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
+ +P++ ++APE + ++DV++FGVL+ EI T
Sbjct: 217 TNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 114/273 (41%), Gaps = 25/273 (9%)
Query: 244 ATNNFHSENMVGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLM-ELGIIGHV 301
A +F +G+G + VY + I A+K L L E+ I H+
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 302 CHPNTATLVGCCIE-NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHY 360
HPN L G + +YLI ++ G + L + Y + +A L Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATY--ITELANALSY 128
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
H +R+IHRDIK N+LLG E +I DFG + P+ + GT YL PE
Sbjct: 129 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPE 181
Query: 421 YFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEG 480
+ DEK D+++ GVL E + G+ P +++ + + + E P
Sbjct: 182 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT------YQETYKRISRVEFTFPDFVT 235
Query: 481 EYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLE 513
E D + RL ++ + RP + EVLE
Sbjct: 236 EGARDLISRL-------LKHNPSQRPMLREVLE 261
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 85/162 (52%), Gaps = 26/162 (16%)
Query: 303 HPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWP----------IRYKIV 351
H N L+G C ++G LY+I ++ GNL L R +E+ + +K +
Sbjct: 92 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 151
Query: 352 LG----VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN----KCT 403
+ +ARG+ YL ++ IHRD+ A NVL+ + +I DFGLA+ + N K T
Sbjct: 152 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 208
Query: 404 HHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
+ +P++ ++APE + ++DV++FGVL+ EI T
Sbjct: 209 TNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 116/267 (43%), Gaps = 21/267 (7%)
Query: 248 FHSENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTA 307
F +G+G + EV+KG + +K+ ++ E+ ++ P
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 308 TLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCK 366
G +++ L++I + G +AL L+ I+ + +GL YLH K
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGG---SALDLLEPGPLDETQIATILREILKGLDYLHSEKK 125
Query: 367 RRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGI 426
IHRDIKA+NVLL E ++ DFG+A L + T GT ++APE
Sbjct: 126 ---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNXFVGTPFWMAPEVIKQSA 180
Query: 427 IDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEGEYDTDQ 486
D K D+++ G+ +E+ G P VL+ L+ N P+LEG Y
Sbjct: 181 YDSKADIWSLGITAIELARGEPPHSELHPMKVLF---LIPKNN-----PPTLEGNYSKP- 231
Query: 487 MHRLVLIADYCVRQTSAWRPSMSEVLE 513
L + C+ + ++RP+ E+L+
Sbjct: 232 ---LKEFVEACLNKEPSFRPTAKELLK 255
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 132/301 (43%), Gaps = 46/301 (15%)
Query: 247 NFHSENMVGQGGYSEV-YKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
N+ +G+G +++V ++ GR++A+K + E+ I+ + HPN
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 306 TATLVGCC-IENGLYLIFNFSQNGNL-DAALHDERSKSLEWPIRYKIVLGVARGLHYLHK 363
L E LYLI ++ G + D + R K E +++ ++ + H
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCH---- 128
Query: 364 GCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAI-PIEGTFGYLAPEYF 422
++RI+HRD+KA N+LL D +I DFG + N+ T + G+ Y APE F
Sbjct: 129 --QKRIVHRDLKAENLLLDADMNIKIADFGFS----NEFTVGGKLDTFCGSPPYAAPELF 182
Query: 423 MHGIID-EKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEGE 481
D + DV++ GV+L +++G P D NL EL + L G+
Sbjct: 183 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ---------------NLKELRERVLRGK 227
Query: 482 Y--------DTDQMHRLVLIADYCVRQTSAWRPSMSEVLE--LLTSGHDSEFAKSWRMPE 531
Y D + + + L+ + R T + ++++ + +GH+ + K + PE
Sbjct: 228 YRIPFYMSTDCENLLKRFLVLNPIKRGT------LEQIMKDRWINAGHEEDELKPFVEPE 281
Query: 532 F 532
Sbjct: 282 L 282
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 117/273 (42%), Gaps = 25/273 (9%)
Query: 244 ATNNFHSENMVGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLM-ELGIIGHV 301
A +F +G+G + VY + I A+K L L E+ I H+
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 302 CHPNTATLVGCCIE-NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHY 360
HPN L G + +YLI ++ G + L + Y + +A L Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSY 126
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
H +R+IHRDIK N+LLG E +I DFG + P+ + AA+ GT YL PE
Sbjct: 127 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS--SRRAALC--GTLDYLPPE 179
Query: 421 YFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEG 480
+ DEK D+++ GVL E + G+ P +++ + + + E P
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY------QETYKRISRVEFTFPDFVT 233
Query: 481 EYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLE 513
E D + RL ++ + RP + EVLE
Sbjct: 234 EGARDLISRL-------LKHNPSQRPMLREVLE 259
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 85/162 (52%), Gaps = 26/162 (16%)
Query: 303 HPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWP----------IRYKIV 351
H N L+G C ++G LY+I ++ GNL L R +E+ + +K +
Sbjct: 87 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 146
Query: 352 LG----VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN----KCT 403
+ +ARG+ YL ++ IHRD+ A NVL+ + +I DFGLA+ + N K T
Sbjct: 147 VSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKT 203
Query: 404 HHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
+ +P++ ++APE + ++DV++FGVL+ EI T
Sbjct: 204 TNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 85/162 (52%), Gaps = 26/162 (16%)
Query: 303 HPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWP----------IRYKIV 351
H N L+G C ++G LY+I ++ GNL L R +E+ + +K +
Sbjct: 89 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 148
Query: 352 LG----VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN----KCT 403
+ +ARG+ YL ++ IHRD+ A NVL+ + +I DFGLA+ + N K T
Sbjct: 149 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 205
Query: 404 HHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
+ +P++ ++APE + ++DV++FGVL+ EI T
Sbjct: 206 TNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 131/301 (43%), Gaps = 46/301 (15%)
Query: 247 NFHSENMVGQGGYSEV-YKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
N+ +G+G +++V ++ GR++A+K + E+ I+ + HPN
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 306 TATLVGCC-IENGLYLIFNFSQNGNL-DAALHDERSKSLEWPIRYKIVLGVARGLHYLHK 363
L E LYLI ++ G + D + R K E +++ ++ + H
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCH---- 131
Query: 364 GCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAI-PIEGTFGYLAPEYF 422
++RI+HRD+KA N+LL D +I DFG + N+ T + G Y APE F
Sbjct: 132 --QKRIVHRDLKAENLLLDADMNIKIADFGFS----NEFTVGGKLDAFCGAPPYAAPELF 185
Query: 423 MHGIID-EKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEGE 481
D + DV++ GV+L +++G P D NL EL + L G+
Sbjct: 186 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ---------------NLKELRERVLRGK 230
Query: 482 Y--------DTDQMHRLVLIADYCVRQTSAWRPSMSEVLE--LLTSGHDSEFAKSWRMPE 531
Y D + + + L+ + R T + ++++ + +GH+ + K + PE
Sbjct: 231 YRIPFYMSTDCENLLKRFLVLNPIKRGT------LEQIMKDRWINAGHEEDELKPFVEPE 284
Query: 532 F 532
Sbjct: 285 L 285
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 7/194 (3%)
Query: 254 VGQGGYSEVYKGNL-SDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G+G + EV+ G L +D +AVK FL E I+ HPN L+G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAK-FLQEARILKQYSHPNIVRLIGV 180
Query: 313 CIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
C + +Y++ Q G+ L E ++ L ++V A G+ YL C IH
Sbjct: 181 CTQKQPIYIVMELVQGGDFLTFLRTEGAR-LRVKTLLQMVGDAAAGMEYLESKC---CIH 236
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKT 431
RD+ A N L+ +I+DFG+++ + + + + APE +G ++
Sbjct: 237 RDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSES 296
Query: 432 DVFAFGVLLLEIIT 445
DV++FG+LL E +
Sbjct: 297 DVWSFGILLWETFS 310
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 85/162 (52%), Gaps = 26/162 (16%)
Query: 303 HPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWP----------IRYKIV 351
H N L+G C ++G LY+I ++ GNL L R +E+ + +K +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 352 LG----VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN----KCT 403
+ +ARG+ YL ++ IHRD+ A NVL+ + +I DFGLA+ + N K T
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 404 HHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
+ +P++ ++APE + ++DV++FGVL+ EI T
Sbjct: 217 TNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 134/286 (46%), Gaps = 43/286 (15%)
Query: 254 VGQGGYSEVYKGN------LSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHP-NT 306
+G+G + +V + + + R +AVK L + EL I+ H+ H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA-LMSELKILIHIGHHLNV 93
Query: 307 ATLVGCCIENG--LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLG----------V 354
L+G C + G L +I F + GNL L +R++ + + YK L V
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQV 153
Query: 355 ARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTH----HAAIPI 410
A+G+ +L R+ IHRD+ A N+LL +I DFGLA+ + + A +P+
Sbjct: 154 AKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 210
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGN 469
+ ++APE + ++DV++FGVLL EI + G P + + + ++ G
Sbjct: 211 K----WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR--LKEG- 263
Query: 470 LTELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELL 515
T + P +Y T +M++ +L C + RP+ SE++E L
Sbjct: 264 -TRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHL 301
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 16/199 (8%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G+G + +V G+ G K+AVK + FL E ++ + H N L+G
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA----FLAEASVMTQLRHSNLVQLLGVI 83
Query: 314 IE--NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
+E GLY++ + G+L L L K L V + YL +H
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVH 140
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKT 431
RD+ A NVL+ D +++DFGL K + +P++ T APE K+
Sbjct: 141 RDLAARNVLVSEDNVAKVSDFGLTK-EASSTQDTGKLPVKWT----APEALREKKFSTKS 195
Query: 432 DVFAFGVLLLEIIT-GRKP 449
DV++FG+LL EI + GR P
Sbjct: 196 DVWSFGILLWEIYSFGRVP 214
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 117/273 (42%), Gaps = 25/273 (9%)
Query: 244 ATNNFHSENMVGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLM-ELGIIGHV 301
A +F +G+G + VY + I A+K L L E+ I H+
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 302 CHPNTATLVGCCIE-NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHY 360
HPN L G + +YLI ++ G + L + Y + +A L Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSY 123
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
H +R+IHRDIK N+LLG E +I DFG + P+ + AA+ GT YL PE
Sbjct: 124 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS--SRRAALC--GTLDYLPPE 176
Query: 421 YFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEG 480
+ DEK D+++ GVL E + G+ P +++ + + + E P
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY------QETYKRISRVEFTFPDFVT 230
Query: 481 EYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLE 513
E D + RL ++ + RP + EVLE
Sbjct: 231 EGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 120/265 (45%), Gaps = 20/265 (7%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + V+ G + K+A+K + F+ E ++ + HP L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED---FIEEAEVMMKLSHPKLVQLYGVC 71
Query: 314 IENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHR 372
+E + L+F F ++G L L +R + L V G+ YL + +IHR
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEA---SVIHR 127
Query: 373 DIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTD 432
D+ A N L+G + +++DFG+ +++ + + ++ + + +PE F K+D
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDD-QYTSSTGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 433 VFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEGEYDTDQMHRLVL 492
V++FGVL+ E+ + K +R N ++ + + L P L + +
Sbjct: 187 VWSFGVLMWEVFSEGKIPYENRSN----SEVVEDISTGFRLYKPRLASTH-------VYQ 235
Query: 493 IADYCVRQTSAWRPSMSEVLELLTS 517
I ++C ++ RP+ S +L L +
Sbjct: 236 IMNHCWKERPEDRPAFSRLLRQLAA 260
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 85/162 (52%), Gaps = 26/162 (16%)
Query: 303 HPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWP----------IRYKIV 351
H N L+G C ++G LY+I ++ GNL L R +E+ + +K +
Sbjct: 100 HKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 352 LG----VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN----KCT 403
+ +ARG+ YL ++ IHRD+ A NVL+ + +I DFGLA+ + N K T
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 404 HHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
+ +P++ ++APE + ++DV++FGVL+ EI T
Sbjct: 217 TNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 114/273 (41%), Gaps = 25/273 (9%)
Query: 244 ATNNFHSENMVGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLM-ELGIIGHV 301
A +F +G+G + VY + I A+K L L E+ I H+
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 302 CHPNTATLVGCCIE-NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHY 360
HPN L G + +YLI ++ G + L + Y + +A L Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSY 124
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
H +R+IHRDIK N+LLG E +I DFG + P+ + GT YL PE
Sbjct: 125 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSS----RRTTLSGTLDYLPPE 177
Query: 421 YFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEG 480
+ DEK D+++ GVL E + G+ P +++ + + + E P
Sbjct: 178 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT------YQETYKRISRVEFTFPDFVT 231
Query: 481 EYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLE 513
E D + RL ++ + RP + EVLE
Sbjct: 232 EGARDLISRL-------LKHNPSQRPMLREVLE 257
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 16/199 (8%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G+G + +V G+ G K+AVK + FL E ++ + H N L+G
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA----FLAEASVMTQLRHSNLVQLLGVI 68
Query: 314 IE--NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
+E GLY++ + G+L L L K L V + YL +H
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVH 125
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKT 431
RD+ A NVL+ D +++DFGL K + +P++ T APE K+
Sbjct: 126 RDLAARNVLVSEDNVAKVSDFGLTK-EASSTQDTGKLPVKWT----APEALREKKFSTKS 180
Query: 432 DVFAFGVLLLEIIT-GRKP 449
DV++FG+LL EI + GR P
Sbjct: 181 DVWSFGILLWEIYSFGRVP 199
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 112/265 (42%), Gaps = 28/265 (10%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G+G + +V G+ G K+AVK + FL E ++ + H N L+G
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA----FLAEASVMTQLRHSNLVQLLGVI 255
Query: 314 IE--NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
+E GLY++ + G+L L L K L V + YL +H
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVH 312
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKT 431
RD+ A NVL+ D +++DFGL K + +P++ T APE K+
Sbjct: 313 RDLAARNVLVSEDNVAKVSDFGLTK-EASSTQDTGKLPVKWT----APEALREKKFSTKS 367
Query: 432 DVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEGEYDTDQMHRL 490
DV++FG+LL EI + GR P V+ P +E G + D YD
Sbjct: 368 DVWSFGILLWEIYSFGRVPYPRIPLKDVV---PRVEKGYKMDAPDGCPPAVYD------- 417
Query: 491 VLIADYCVRQTSAWRPSMSEVLELL 515
+ C +A RP+ ++ E L
Sbjct: 418 --VMKNCWHLDAATRPTFLQLREQL 440
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 115/267 (43%), Gaps = 21/267 (7%)
Query: 248 FHSENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTA 307
F + +G+G + EVYKG + +++ ++ E+ ++ P
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 308 TLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCK 366
G +++ L++I + G +AL + LE I+ + +GL YLH
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGG---SALDLLKPGPLEETYIATILREILKGLDYLHS--- 134
Query: 367 RRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGI 426
R IHRDIKA+NVLL + ++ DFG+A L + T GT ++APE
Sbjct: 135 ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD--TQIKRNXFVGTPFWMAPEVIKQSA 192
Query: 427 IDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEGEYDTDQ 486
D K D+++ G+ +E+ G P VL+ P P+LEG++
Sbjct: 193 YDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSP--------PTLEGQHSKPF 244
Query: 487 MHRLVLIADYCVRQTSAWRPSMSEVLE 513
+ C+ + +RP+ E+L+
Sbjct: 245 KE----FVEACLNKDPRFRPTAKELLK 267
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 133/299 (44%), Gaps = 35/299 (11%)
Query: 246 NNFHSENMVGQGGYSEVYKGNLSDGR-KIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHP 304
+++ + ++G G + V + + K+A+KR+ L E+ + HP
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDE-LLKEIQAMSQCHHP 73
Query: 305 NTATL-VGCCIENGLYLIFNFSQNGN-LDAALH-----DERSKSLEWPIRYKIVLGVARG 357
N + +++ L+L+ G+ LD H + +S L+ I+ V G
Sbjct: 74 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 133
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLP---NKCTHHAAIPIEGTF 414
L YLHK + IHRD+KA N+LLG D QI DFG++ +L + + GT
Sbjct: 134 LEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 190
Query: 415 GYLAPEYFMHGI--IDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTE 472
++APE M + D K D+++FG+ +E+ TG P P M+ LT
Sbjct: 191 CWMAPE-VMEQVRGYDFKADIWSFGITAIELATGAAPYHKY---------PPMKVLMLTL 240
Query: 473 LVD-PSLE-GEYDTDQMHR----LVLIADYCVRQTSAWRPSMSEVL--ELLTSGHDSEF 523
D PSLE G D + + + + C+++ RP+ +E+L + + EF
Sbjct: 241 QNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKNKEF 299
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 133/279 (47%), Gaps = 38/279 (13%)
Query: 251 ENMVGQGGYSEVYKGNLS-DGRK---IAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNT 306
E ++G G + EV G L G++ +A+K L FL E I+G HPN
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRD-FLSEASIMGQFDHPNI 71
Query: 307 ATLVGCCIE-NGLYLIFNFSQNGNLDAAL--HDERSKSLEWPIRYKIVLGVARGLHYLHK 363
L G + + +I + +NG+LDA L +D R ++ ++ G+ G+ YL
Sbjct: 72 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL---VGMLRGIGSGMKYLSD 128
Query: 364 GCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNK-----CTHHAAIPIEGTFGYLA 418
+HRD+ A N+L+ + +++DFG+++ L + T IPI T A
Sbjct: 129 ---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWT----A 181
Query: 419 PEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPV-DSSRQNLVLWAKPLMESGNLTELVDP 476
PE + +DV+++G+++ E+++ G +P D S Q+++ K + E L +D
Sbjct: 182 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI---KAIEEGYRLPPPMDC 238
Query: 477 SLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELL 515
+ +H+L+L C ++ + RP +++ +L
Sbjct: 239 PI-------ALHQLML---DCWQKERSDRPKFGQIVNML 267
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 106/235 (45%), Gaps = 33/235 (14%)
Query: 237 SYEEISSATNNF---------HSENMVGQGGYSEVYKGNLS-DGRK---IAVKRLXXXXX 283
+YEE A +F H E ++G G EV G L G++ +A+K L
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT 90
Query: 284 XXXXXXXFLMELGIIGHVCHPNTATLVGCCIENGLYLIFN-FSQNGNLDAAL--HDERSK 340
FL E I+G HPN L G L +I + +NG+LD L HD +
Sbjct: 91 ERQRRD-FLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFT 149
Query: 341 SLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN 400
++ ++ GV G+ YL +HRD+ A NVL+ + +++DFGL++ L +
Sbjct: 150 IMQL---VGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED 203
Query: 401 -----KCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKP 449
T IPI T APE +DV++FGV++ E++ G +P
Sbjct: 204 DPDAAXTTTGGKIPIRWT----APEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 133/279 (47%), Gaps = 38/279 (13%)
Query: 251 ENMVGQGGYSEVYKGNLS-DGRK---IAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNT 306
E ++G G + EV G L G++ +A+K L FL E I+G HPN
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRD-FLSEASIMGQFDHPNI 77
Query: 307 ATLVGCCIE-NGLYLIFNFSQNGNLDAAL--HDERSKSLEWPIRYKIVLGVARGLHYLHK 363
L G + + +I + +NG+LDA L +D R ++ ++ G+ G+ YL
Sbjct: 78 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL---VGMLRGIGSGMKYLSD 134
Query: 364 GCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNK-----CTHHAAIPIEGTFGYLA 418
+HRD+ A N+L+ + +++DFG+++ L + T IPI T A
Sbjct: 135 ---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWT----A 187
Query: 419 PEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPV-DSSRQNLVLWAKPLMESGNLTELVDP 476
PE + +DV+++G+++ E+++ G +P D S Q+++ K + E L +D
Sbjct: 188 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI---KAIEEGYRLPPPMDC 244
Query: 477 SLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELL 515
+ +H+L+L C ++ + RP +++ +L
Sbjct: 245 PI-------ALHQLML---DCWQKERSDRPKFGQIVNML 273
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 114/273 (41%), Gaps = 25/273 (9%)
Query: 244 ATNNFHSENMVGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLM-ELGIIGHV 301
A +F +G+G + VY + I A+K L L E+ I H+
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 302 CHPNTATLVGCCIE-NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHY 360
HPN L G + +YLI ++ G + L + Y + +A L Y
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSY 140
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
H +R+IHRDIK N+LLG E +I DFG + P+ + GT YL PE
Sbjct: 141 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPE 193
Query: 421 YFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEG 480
+ DEK D+++ GVL E + G+ P +++ + + + E P
Sbjct: 194 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT------YQETYKRISRVEFTFPDFVT 247
Query: 481 EYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLE 513
E D + RL ++ + RP + EVLE
Sbjct: 248 EGARDLISRL-------LKHNPSQRPMLREVLE 273
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 119/273 (43%), Gaps = 25/273 (9%)
Query: 244 ATNNFHSENMVGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLM-ELGIIGHV 301
A +F +G+G + VY + + I A+K L L E+ I H+
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 302 CHPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHY 360
HPN L G ++ +YLI ++ G + L + Y + +A L Y
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSY 123
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
H +++IHRDIK N+LLG E +I DFG + P+ + AA+ GT YL PE
Sbjct: 124 CHS---KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPS--SRRAALC--GTLDYLPPE 176
Query: 421 YFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEG 480
+ DEK D+++ GVL E + G+ P +++ + + + E P
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY------QDTYKRISRVEFTFPDFVT 230
Query: 481 EYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLE 513
E D + RL ++ + RP + EVLE
Sbjct: 231 EGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 106/235 (45%), Gaps = 33/235 (14%)
Query: 237 SYEEISSATNNF---------HSENMVGQGGYSEVYKGNLS-DGRK---IAVKRLXXXXX 283
+YEE A +F H E ++G G EV G L G++ +A+K L
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT 90
Query: 284 XXXXXXXFLMELGIIGHVCHPNTATLVGCCIENGLYLIFN-FSQNGNLDAAL--HDERSK 340
FL E I+G HPN L G L +I + +NG+LD L HD +
Sbjct: 91 ERQRRD-FLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFT 149
Query: 341 SLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN 400
++ ++ GV G+ YL +HRD+ A NVL+ + +++DFGL++ L +
Sbjct: 150 IMQL---VGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED 203
Query: 401 K-----CTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKP 449
T IPI T APE +DV++FGV++ E++ G +P
Sbjct: 204 DPDAAYTTTGGKIPIRWT----APEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 114/273 (41%), Gaps = 25/273 (9%)
Query: 244 ATNNFHSENMVGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLM-ELGIIGHV 301
A +F +G+G + VY + I A+K L L E+ I H+
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 302 CHPNTATLVGCCIE-NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHY 360
HPN L G + +YLI ++ G + L + Y + +A L Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSY 128
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
H +R+IHRDIK N+LLG E +I DFG + P+ + GT YL PE
Sbjct: 129 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPE 181
Query: 421 YFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEG 480
+ DEK D+++ GVL E + G+ P +++ + + + E P
Sbjct: 182 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT------YQETYKRISRVEFTFPDFVT 235
Query: 481 EYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLE 513
E D + RL ++ + RP + EVLE
Sbjct: 236 EGARDLISRL-------LKHNPSQRPMLREVLE 261
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 81/164 (49%), Gaps = 30/164 (18%)
Query: 303 HPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI----------- 350
H N L+G C ++G LY+I ++ GNL L R +E Y I
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGME--XSYDINRVPEEQMTFK 157
Query: 351 -----VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN----K 401
+ARG+ YL ++ IHRD+ A NVL+ + +I DFGLA+ + N K
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXK 214
Query: 402 CTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
T + +P++ ++APE + ++DV++FGVL+ EI T
Sbjct: 215 KTTNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 116/242 (47%), Gaps = 26/242 (10%)
Query: 231 PLLTCFSYEEISSATNNFHSENMVGQGGYSEVYKGNLSDGRK----IAVKRLXXXXXXXX 286
P T + + ATN + +VG G + EV G L K +A+K L
Sbjct: 31 PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 287 XXXXFLMELGIIGHVCHPNTATLVGCCIENG-LYLIFNFSQNGNLDAAL--HDERSKSLE 343
FL E I+G HPN L G ++ + ++ + +NG+LD+ L HD + ++
Sbjct: 90 RRD-FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ 148
Query: 344 WPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNK-- 401
++ G+A G+ YL +HRD+ A N+L+ + +++DFGLA+ L +
Sbjct: 149 ---LVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPE 202
Query: 402 ---CTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPV-DSSRQN 456
T IPI T +PE + +DV+++G++L E+++ G +P + S Q+
Sbjct: 203 AAYTTRGGKIPIRWT----SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 258
Query: 457 LV 458
++
Sbjct: 259 VI 260
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 15/221 (6%)
Query: 244 ATNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVC 302
+ NF +G+G Y VYK N G +A+K++ + E+ ++ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 303 HPNTATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYL 361
HPN L+ EN LYL+F F +L + + P+ + + +GL +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 362 HKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAP 419
H R++HRD+K N+L+ + ++ DFGLA+ +P + H + T Y AP
Sbjct: 123 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP 175
Query: 420 EYFMH-GIIDEKTDVFAFGVLLLEIITGRK--PVDSSRQNL 457
E + D+++ G + E++T R P DS L
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 216
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 15/218 (6%)
Query: 247 NFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
NF +G+G Y VYK N G +A+K++ + E+ ++ + HPN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 306 TATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKG 364
L+ EN LYL+F F +L + + P+ + + +GL + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 121
Query: 365 CKRRIIHRDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAPEYF 422
R++HRD+K N+L+ + ++ DFGLA+ +P + H + T Y APE
Sbjct: 122 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAPEIL 175
Query: 423 M-HGIIDEKTDVFAFGVLLLEIITGRK--PVDSSRQNL 457
+ D+++ G + E++T R P DS L
Sbjct: 176 LGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 213
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 101/210 (48%), Gaps = 19/210 (9%)
Query: 252 NMVGQGGYSEVYKGN-LSDGRKIAVK---RLXXXXXXXXXXXXFLMELGIIGHVCHPNTA 307
++G G + VYKG + +G + + ++ F+ E I+ + HP+
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 308 TLVGCCIENGLYLIFNFSQNGNLDAALHDERSKS-----LEWPIRYKIVLGVARGLHYLH 362
L+G C+ + L+ +G L +H+ + L W ++ +A+G+ YL
Sbjct: 81 RLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLE 134
Query: 363 KGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF 422
+ RR++HRD+ A NVL+ +ITDFGLA+ L + A + ++A E
Sbjct: 135 E---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 191
Query: 423 MHGIIDEKTDVFAFGVLLLEIIT-GRKPVD 451
+ ++DV+++GV + E++T G KP D
Sbjct: 192 HYRKFTHQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 101/210 (48%), Gaps = 19/210 (9%)
Query: 252 NMVGQGGYSEVYKGN-LSDGRKIAVK---RLXXXXXXXXXXXXFLMELGIIGHVCHPNTA 307
++G G + VYKG + +G + + ++ F+ E I+ + HP+
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 308 TLVGCCIENGLYLIFNFSQNGNLDAALHDERSKS-----LEWPIRYKIVLGVARGLHYLH 362
L+G C+ + L+ +G L +H+ + L W ++ +A+G+ YL
Sbjct: 104 RLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLE 157
Query: 363 KGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF 422
+ RR++HRD+ A NVL+ +ITDFGLA+ L + A + ++A E
Sbjct: 158 E---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 214
Query: 423 MHGIIDEKTDVFAFGVLLLEIIT-GRKPVD 451
+ ++DV+++GV + E++T G KP D
Sbjct: 215 HYRKFTHQSDVWSYGVTIWELMTFGGKPYD 244
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 15/221 (6%)
Query: 244 ATNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVC 302
+ NF +G+G Y VYK N G +A+K++ + E+ ++ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 303 HPNTATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYL 361
HPN L+ EN LYL+F F +L + + P+ + + +GL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 362 HKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAP 419
H R++HRD+K N+L+ + ++ DFGLA+ +P + H + T Y AP
Sbjct: 120 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP 172
Query: 420 EYFMH-GIIDEKTDVFAFGVLLLEIITGRK--PVDSSRQNL 457
E + D+++ G + E++T R P DS L
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 213
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 15/221 (6%)
Query: 244 ATNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVC 302
+ NF +G+G Y VYK N G +A+K++ + E+ ++ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 303 HPNTATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYL 361
HPN L+ EN LYL+F F +L + + P+ + + +GL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 362 HKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAP 419
H R++HRD+K N+L+ + ++ DFGLA+ +P + H + T Y AP
Sbjct: 120 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP 172
Query: 420 EYFMH-GIIDEKTDVFAFGVLLLEIITGRK--PVDSSRQNL 457
E + D+++ G + E++T R P DS L
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 213
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 114/273 (41%), Gaps = 25/273 (9%)
Query: 244 ATNNFHSENMVGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLM-ELGIIGHV 301
A +F +G+G + VY + I A+K L L E+ I H+
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 302 CHPNTATLVGCCIE-NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHY 360
HPN L G + +YLI ++ G + L + Y + +A L Y
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSY 149
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
H +R+IHRDIK N+LLG E +I DFG + P+ + GT YL PE
Sbjct: 150 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPE 202
Query: 421 YFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEG 480
+ DEK D+++ GVL E + G+ P +++ + + + E P
Sbjct: 203 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT------YQETYKRISRVEFTFPDFVT 256
Query: 481 EYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLE 513
E D + RL ++ + RP + EVLE
Sbjct: 257 EGARDLISRL-------LKHNPSQRPMLREVLE 282
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 15/221 (6%)
Query: 244 ATNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVC 302
+ NF +G+G Y VYK N G +A+K++ + E+ ++ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 303 HPNTATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYL 361
HPN L+ EN LYL+F F +L + + P+ + + +GL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 362 HKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAP 419
H R++HRD+K N+L+ + ++ DFGLA+ +P + H + T Y AP
Sbjct: 120 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP 172
Query: 420 EYFMH-GIIDEKTDVFAFGVLLLEIITGRK--PVDSSRQNL 457
E + D+++ G + E++T R P DS L
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 213
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 15/218 (6%)
Query: 247 NFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
NF +G+G Y VYK N G +A+K++ + E+ ++ + HPN
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 306 TATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKG 364
L+ EN LYL+F F +L + + P+ + + +GL + H
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 128
Query: 365 CKRRIIHRDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAPEYF 422
R++HRD+K N+L+ + ++ DFGLA+ +P + H + T Y APE
Sbjct: 129 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAPEIL 182
Query: 423 M-HGIIDEKTDVFAFGVLLLEIITGRK--PVDSSRQNL 457
+ D+++ G + E++T R P DS L
Sbjct: 183 LGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 220
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 114/273 (41%), Gaps = 25/273 (9%)
Query: 244 ATNNFHSENMVGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLM-ELGIIGHV 301
A +F +G+G + VY + I A+K L L E+ I H+
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 302 CHPNTATLVGCCIE-NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHY 360
HPN L G + +YLI ++ G + L + Y + +A L Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSY 126
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
H +R+IHRDIK N+LLG E +I DFG + P+ + GT YL PE
Sbjct: 127 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPE 179
Query: 421 YFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEG 480
+ DEK D+++ GVL E + G+ P +++ + + + E P
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT------YQETYKRISRVEFTFPDFVT 233
Query: 481 EYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLE 513
E D + RL ++ + RP + EVLE
Sbjct: 234 EGARDLISRL-------LKHNPSQRPMLREVLE 259
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 129/286 (45%), Gaps = 33/286 (11%)
Query: 246 NNFHSENMVGQGGYSEVYKGNLSDGR-KIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHP 304
+++ + ++G G + V + + K+A+KR+ L E+ + HP
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDE-LLKEIQAMSQCHHP 68
Query: 305 NTATL-VGCCIENGLYLIFNFSQNGN-LDAALH-----DERSKSLEWPIRYKIVLGVARG 357
N + +++ L+L+ G+ LD H + +S L+ I+ V G
Sbjct: 69 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 128
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLP---NKCTHHAAIPIEGTF 414
L YLHK + IHRD+KA N+LLG D QI DFG++ +L + + GT
Sbjct: 129 LEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 185
Query: 415 GYLAPEYFMHGI--IDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTE 472
++APE M + D K D+++FG+ +E+ TG P P M+ LT
Sbjct: 186 CWMAPE-VMEQVRGYDFKADIWSFGITAIELATGAAPYHKY---------PPMKVLMLTL 235
Query: 473 LVD-PSLE-GEYDTDQMHR----LVLIADYCVRQTSAWRPSMSEVL 512
D PSLE G D + + + + C+++ RP+ +E+L
Sbjct: 236 QNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 281
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 15/221 (6%)
Query: 244 ATNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVC 302
+ NF +G+G Y VYK N G +A+K++ + E+ ++ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 303 HPNTATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYL 361
HPN L+ EN LYL+F F +L + + P+ + + +GL +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 362 HKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAP 419
H R++HRD+K N+L+ + ++ DFGLA+ +P + H + T Y AP
Sbjct: 123 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP 175
Query: 420 EYFMH-GIIDEKTDVFAFGVLLLEIITGRK--PVDSSRQNL 457
E + D+++ G + E++T R P DS L
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 216
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 114/273 (41%), Gaps = 25/273 (9%)
Query: 244 ATNNFHSENMVGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLM-ELGIIGHV 301
A +F +G+G + VY + I A+K L L E+ I H+
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 302 CHPNTATLVGCCIE-NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHY 360
HPN L G + +YLI ++ G + L + Y + +A L Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSY 124
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
H +R+IHRDIK N+LLG E +I DFG + P+ + GT YL PE
Sbjct: 125 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTDLCGTLDYLPPE 177
Query: 421 YFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEG 480
+ DEK D+++ GVL E + G+ P +++ + + + E P
Sbjct: 178 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT------YQETYKRISRVEFTFPDFVT 231
Query: 481 EYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLE 513
E D + RL ++ + RP + EVLE
Sbjct: 232 EGARDLISRL-------LKHNPSQRPMLREVLE 257
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 15/221 (6%)
Query: 244 ATNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVC 302
+ NF +G+G Y VYK N G +A+K++ + E+ ++ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 303 HPNTATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYL 361
HPN L+ EN LYL+F F +L + + P+ + + +GL +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 362 HKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAP 419
H R++HRD+K N+L+ + ++ DFGLA+ +P + H + T Y AP
Sbjct: 122 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP 174
Query: 420 EYFMH-GIIDEKTDVFAFGVLLLEIITGRK--PVDSSRQNL 457
E + D+++ G + E++T R P DS L
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 215
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 15/221 (6%)
Query: 244 ATNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVC 302
+ NF +G+G Y VYK N G +A+K++ + E+ ++ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 303 HPNTATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYL 361
HPN L+ EN LYL+F F +L + + P+ + + +GL +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 362 HKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAP 419
H R++HRD+K N+L+ + ++ DFGLA+ +P + H + T Y AP
Sbjct: 123 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP 175
Query: 420 EYFMH-GIIDEKTDVFAFGVLLLEIITGRK--PVDSSRQNL 457
E + D+++ G + E++T R P DS L
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 216
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 15/221 (6%)
Query: 244 ATNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVC 302
+ NF +G+G Y VYK N G +A+K++ + E+ ++ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 303 HPNTATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYL 361
HPN L+ EN LYL+F F +L + + P+ + + +GL +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 362 HKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAP 419
H R++HRD+K N+L+ + ++ DFGLA+ +P + H + T Y AP
Sbjct: 122 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP 174
Query: 420 EYFMH-GIIDEKTDVFAFGVLLLEIITGRK--PVDSSRQNL 457
E + D+++ G + E++T R P DS L
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 215
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 15/221 (6%)
Query: 244 ATNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVC 302
+ NF +G+G Y VYK N G +A+K++ + E+ ++ +
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 303 HPNTATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYL 361
HPN L+ EN LYL+F F +L + + P+ + + +GL +
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 362 HKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAP 419
H R++HRD+K N+L+ + ++ DFGLA+ +P + H + T Y AP
Sbjct: 124 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP 176
Query: 420 EYFMH-GIIDEKTDVFAFGVLLLEIITGRK--PVDSSRQNL 457
E + D+++ G + E++T R P DS L
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 217
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 114/273 (41%), Gaps = 25/273 (9%)
Query: 244 ATNNFHSENMVGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLM-ELGIIGHV 301
A +F +G+G + VY + I A+K L L E+ I H+
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 302 CHPNTATLVGCCIE-NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHY 360
HPN L G + +YLI ++ G + L + Y + +A L Y
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSY 125
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
H +R+IHRDIK N+LLG E +I DFG + P+ + GT YL PE
Sbjct: 126 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXXLCGTLDYLPPE 178
Query: 421 YFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEG 480
+ DEK D+++ GVL E + G+ P +++ + + + E P
Sbjct: 179 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT------YQETYKRISRVEFTFPDFVT 232
Query: 481 EYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLE 513
E D + RL ++ + RP + EVLE
Sbjct: 233 EGARDLISRL-------LKHNPSQRPMLREVLE 258
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 15/221 (6%)
Query: 244 ATNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVC 302
+ NF +G+G Y VYK N G +A+K++ + E+ ++ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 303 HPNTATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYL 361
HPN L+ EN LYL+F F +L + + P+ + + +GL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 362 HKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAP 419
H R++HRD+K N+L+ + ++ DFGLA+ +P + H + T Y AP
Sbjct: 120 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP 172
Query: 420 EYFMH-GIIDEKTDVFAFGVLLLEIITGRK--PVDSSRQNL 457
E + D+++ G + E++T R P DS L
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 213
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 15/221 (6%)
Query: 244 ATNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVC 302
+ NF +G+G Y VYK N G +A+K++ + E+ ++ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 303 HPNTATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYL 361
HPN L+ EN LYL+F F +L + + P+ + + +GL +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 362 HKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAP 419
H R++HRD+K N+L+ + ++ DFGLA+ +P + H + T Y AP
Sbjct: 121 HS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP 173
Query: 420 EYFMH-GIIDEKTDVFAFGVLLLEIITGRK--PVDSSRQNL 457
E + D+++ G + E++T R P DS L
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 214
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 113/273 (41%), Gaps = 25/273 (9%)
Query: 244 ATNNFHSENMVGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLM-ELGIIGHV 301
A +F +G+G + VY + I A+K L L E+ I H+
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 302 CHPNTATLVGCCIE-NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHY 360
HPN L G + +YLI ++ G + L + Y + +A L Y
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSY 149
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
H +R+IHRDIK N+LLG E +I DFG + P+ GT YL PE
Sbjct: 150 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GTLDYLPPE 202
Query: 421 YFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEG 480
+ DEK D+++ GVL E + G+ P +++ + + + E P
Sbjct: 203 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT------YQETYKRISRVEFTFPDFVT 256
Query: 481 EYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLE 513
E D + RL ++ + RP + EVLE
Sbjct: 257 EGARDLISRL-------LKHNPSQRPMLREVLE 282
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 15/218 (6%)
Query: 247 NFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
NF +G+G Y VYK N G +A+K++ + E+ ++ + HPN
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 306 TATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKG 364
L+ EN LYL+F F +L + + P+ + + +GL + H
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 128
Query: 365 CKRRIIHRDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAPEYF 422
R++HRD+K N+L+ + ++ DFGLA+ +P + H + T Y APE
Sbjct: 129 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAPEIL 182
Query: 423 MH-GIIDEKTDVFAFGVLLLEIITGRK--PVDSSRQNL 457
+ D+++ G + E++T R P DS L
Sbjct: 183 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 220
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 124/285 (43%), Gaps = 27/285 (9%)
Query: 232 LLTCFSYEEISSATNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXX 290
L TC I +F N++G+G ++ VY+ ++ G ++A+K +
Sbjct: 2 LATC-----IGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQ 56
Query: 291 FLM-ELGIIGHVCHPNTATLVGCCIE-NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRY 348
+ E+ I + HP+ L + N +YL+ NG ++ L + E R+
Sbjct: 57 RVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARH 116
Query: 349 KIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAI 408
+ + G+ YLH I+HRD+ SN+LL + +I DFGLA L K H
Sbjct: 117 -FMHQIITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQL--KMPHEKHY 170
Query: 409 PIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESG 468
+ GT Y++PE ++DV++ G + ++ GR P D+ K +
Sbjct: 171 TLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDT------VKNTLNKV 224
Query: 469 NLTELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLE 513
L + PS D +H+L +R+ A R S+S VL+
Sbjct: 225 VLADYEMPSFLSIEAKDLIHQL-------LRRNPADRLSLSSVLD 262
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 114/273 (41%), Gaps = 25/273 (9%)
Query: 244 ATNNFHSENMVGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLM-ELGIIGHV 301
A +F +G+G + VY + I A+K L L E+ I H+
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 302 CHPNTATLVGCCIE-NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHY 360
HPN L G + +YLI ++ G + L + Y + +A L Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSY 123
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
H +R+IHRDIK N+LLG E +I DFG + P+ + GT YL PE
Sbjct: 124 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPE 176
Query: 421 YFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEG 480
+ DEK D+++ GVL E + G+ P +++ + + + E P
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT------YQETYKRISRVEFTFPDFVT 230
Query: 481 EYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLE 513
E D + RL ++ + RP + EVLE
Sbjct: 231 EGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 15/218 (6%)
Query: 247 NFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
NF +G+G Y VYK N G +A+K++ + E+ ++ + HPN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 306 TATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKG 364
L+ EN LYL+F F +L + + P+ + + +GL + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHS- 121
Query: 365 CKRRIIHRDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAPEYF 422
R++HRD+K N+L+ + ++ DFGLA+ +P + H + T Y APE
Sbjct: 122 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAPEIL 175
Query: 423 MH-GIIDEKTDVFAFGVLLLEIITGRK--PVDSSRQNL 457
+ D+++ G + E++T R P DS L
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 213
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 15/221 (6%)
Query: 244 ATNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVC 302
+ NF +G+G Y VYK N G +A+K++ + E+ ++ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 303 HPNTATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYL 361
HPN L+ EN LYL+F F +L + + P+ + + +GL +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 362 HKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAP 419
H R++HRD+K N+L+ + ++ DFGLA+ +P + H + T Y AP
Sbjct: 121 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP 173
Query: 420 EYFMH-GIIDEKTDVFAFGVLLLEIITGRK--PVDSSRQNL 457
E + D+++ G + E++T R P DS L
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 214
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 15/221 (6%)
Query: 244 ATNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVC 302
+ NF +G+G Y VYK N G +A+K++ + E+ ++ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 303 HPNTATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYL 361
HPN L+ EN LYL+F F +L + + P+ + + +GL +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 362 HKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAP 419
H R++HRD+K N+L+ + ++ DFGLA+ +P + H + T Y AP
Sbjct: 122 HS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP 174
Query: 420 EYFMH-GIIDEKTDVFAFGVLLLEIITGRK--PVDSSRQNL 457
E + D+++ G + E++T R P DS L
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 215
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 15/218 (6%)
Query: 247 NFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
NF +G+G Y VYK N G +A+K++ + E+ ++ + HPN
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 306 TATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKG 364
L+ EN LYL+F F +L + + P+ + + +GL + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 120
Query: 365 CKRRIIHRDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAPEYF 422
R++HRD+K N+L+ + ++ DFGLA+ +P + H + T Y APE
Sbjct: 121 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL 174
Query: 423 MH-GIIDEKTDVFAFGVLLLEIITGRK--PVDSSRQNL 457
+ D+++ G + E++T R P DS L
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 212
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 15/218 (6%)
Query: 247 NFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
NF +G+G Y VYK N G +A+K++ + E+ ++ + HPN
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 306 TATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKG 364
L+ EN LYL+F F +L + + P+ + + +GL + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 120
Query: 365 CKRRIIHRDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAPEYF 422
R++HRD+K N+L+ + ++ DFGLA+ +P + H + T Y APE
Sbjct: 121 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL 174
Query: 423 MH-GIIDEKTDVFAFGVLLLEIITGRK--PVDSSRQNL 457
+ D+++ G + E++T R P DS L
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 212
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 15/218 (6%)
Query: 247 NFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
NF +G+G Y VYK N G +A+K++ + E+ ++ + HPN
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 67
Query: 306 TATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKG 364
L+ EN LYL+F F +L + + P+ + + +GL + H
Sbjct: 68 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 125
Query: 365 CKRRIIHRDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAPEYF 422
R++HRD+K N+L+ + ++ DFGLA+ +P + H + T Y APE
Sbjct: 126 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAPEIL 179
Query: 423 MH-GIIDEKTDVFAFGVLLLEIITGRK--PVDSSRQNL 457
+ D+++ G + E++T R P DS L
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 217
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 15/221 (6%)
Query: 244 ATNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVC 302
+ NF +G+G Y VYK N G +A+K++ + E+ ++ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 303 HPNTATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYL 361
HPN L+ EN LYL+F F +L + + P+ + + +GL +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 362 HKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAP 419
H R++HRD+K N+L+ + ++ DFGLA+ +P + H + T Y AP
Sbjct: 121 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAP 173
Query: 420 EYFMH-GIIDEKTDVFAFGVLLLEIITGRK--PVDSSRQNL 457
E + D+++ G + E++T R P DS L
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 214
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 114/273 (41%), Gaps = 25/273 (9%)
Query: 244 ATNNFHSENMVGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLM-ELGIIGHV 301
A +F +G+G + VY + I A+K L L E+ I H+
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 302 CHPNTATLVGCCIE-NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHY 360
HPN L G + +YLI ++ G + L + Y + +A L Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSY 123
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
H +R+IHRDIK N+LLG E +I DFG + P+ + GT YL PE
Sbjct: 124 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTELCGTLDYLPPE 176
Query: 421 YFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEG 480
+ DEK D+++ GVL E + G+ P +++ + + + E P
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT------YQETYKRISRVEFTFPDFVT 230
Query: 481 EYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLE 513
E D + RL ++ + RP + EVLE
Sbjct: 231 EGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 114/273 (41%), Gaps = 25/273 (9%)
Query: 244 ATNNFHSENMVGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLM-ELGIIGHV 301
A +F +G+G + VY + I A+K L L E+ I H+
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 302 CHPNTATLVGCCIE-NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHY 360
HPN L G + +YLI ++ G + L + Y + +A L Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSY 128
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
H +R+IHRDIK N+LLG E +I DFG + P+ + GT YL PE
Sbjct: 129 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTDLCGTLDYLPPE 181
Query: 421 YFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEG 480
+ DEK D+++ GVL E + G+ P +++ + + + E P
Sbjct: 182 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT------YQETYKRISRVEFTFPDFVT 235
Query: 481 EYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLE 513
E D + RL ++ + RP + EVLE
Sbjct: 236 EGARDLISRL-------LKHNPSQRPMLREVLE 261
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 114/273 (41%), Gaps = 25/273 (9%)
Query: 244 ATNNFHSENMVGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLM-ELGIIGHV 301
A +F +G+G + VY + I A+K L L E+ I H+
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 302 CHPNTATLVGCCIE-NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHY 360
HPN L G + +YLI ++ G + L + Y + +A L Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSY 123
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
H +R+IHRDIK N+LLG E +I DFG + P+ + GT YL PE
Sbjct: 124 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTDLCGTLDYLPPE 176
Query: 421 YFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEG 480
+ DEK D+++ GVL E + G+ P +++ + + + E P
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT------YQETYKRISRVEFTFPDFVT 230
Query: 481 EYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLE 513
E D + RL ++ + RP + EVLE
Sbjct: 231 EGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 113/273 (41%), Gaps = 25/273 (9%)
Query: 244 ATNNFHSENMVGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLM-ELGIIGHV 301
A +F +G+G + VY + I A+K L L E+ I H+
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 302 CHPNTATLVGCCIE-NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHY 360
HPN L G + +YLI ++ G + L + Y + +A L Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSY 128
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
H +R+IHRDIK N+LLG E +I DFG + P+ + GT YL PE
Sbjct: 129 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPE 181
Query: 421 YFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEG 480
DEK D+++ GVL E + G+ P +++ + + + E P
Sbjct: 182 XIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANT------YQETYKRISRVEFTFPDFVT 235
Query: 481 EYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLE 513
E D + RL ++ + RP + EVLE
Sbjct: 236 EGARDLISRL-------LKHNPSQRPXLREVLE 261
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 110/227 (48%), Gaps = 25/227 (11%)
Query: 246 NNFHSENMVGQGGYSEVYKGNLSDGRK----IAVKRLXXXXXXXXXXXXFLMELGIIGHV 301
N + +VG G + EV G L K +A+K L FL E I+G
Sbjct: 33 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQF 91
Query: 302 CHPNTATLVGCCIENG-LYLIFNFSQNGNLDAAL--HDERSKSLEWPIRYKIVLGVARGL 358
HPN L G ++ + ++ + +NG+LD+ L HD + ++ ++ G+A G+
Sbjct: 92 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ---LVGMLRGIASGM 148
Query: 359 HYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNK-----CTHHAAIPIEGT 413
YL +HRD+ A N+L+ + +++DFGL++ L + T IPI T
Sbjct: 149 KYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 205
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPV-DSSRQNLV 458
+PE + +DV+++G++L E+++ G +P + S Q+++
Sbjct: 206 ----SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 248
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 15/218 (6%)
Query: 247 NFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
NF +G+G Y VYK N G +A+K++ + E+ ++ + HPN
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 306 TATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKG 364
L+ EN LYL+F F +L + + P+ + + +GL + H
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 122
Query: 365 CKRRIIHRDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAPEYF 422
R++HRD+K N+L+ + ++ DFGLA+ +P + H + T Y APE
Sbjct: 123 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL 176
Query: 423 MH-GIIDEKTDVFAFGVLLLEIITGRK--PVDSSRQNL 457
+ D+++ G + E++T R P DS L
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 214
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 15/218 (6%)
Query: 247 NFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
NF +G+G Y VYK N G +A+K++ + E+ ++ + HPN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 306 TATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKG 364
L+ EN LYL+F F +L + + P+ + + +GL + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 121
Query: 365 CKRRIIHRDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAPEYF 422
R++HRD+K N+L+ + ++ DFGLA+ +P + H + T Y APE
Sbjct: 122 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAPEIL 175
Query: 423 MH-GIIDEKTDVFAFGVLLLEIITGRK--PVDSSRQNL 457
+ D+++ G + E++T R P DS L
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 213
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 15/218 (6%)
Query: 247 NFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
NF +G+G Y VYK N G +A+K++ + E+ ++ + HPN
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 306 TATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKG 364
L+ EN LYL+F F +L + + P+ + + +GL + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 120
Query: 365 CKRRIIHRDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAPEYF 422
R++HRD+K N+L+ + ++ DFGLA+ +P + H + T Y APE
Sbjct: 121 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAPEIL 174
Query: 423 MH-GIIDEKTDVFAFGVLLLEIITGRK--PVDSSRQNL 457
+ D+++ G + E++T R P DS L
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 212
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 15/218 (6%)
Query: 247 NFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
NF +G+G Y VYK N G +A+K++ + E+ ++ + HPN
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 306 TATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKG 364
L+ EN LYL+F F +L + + P+ + + +GL + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 120
Query: 365 CKRRIIHRDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAPEYF 422
R++HRD+K N+L+ + ++ DFGLA+ +P + H + T Y APE
Sbjct: 121 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAPEIL 174
Query: 423 MH-GIIDEKTDVFAFGVLLLEIITGRK--PVDSSRQNL 457
+ D+++ G + E++T R P DS L
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 212
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 114/273 (41%), Gaps = 25/273 (9%)
Query: 244 ATNNFHSENMVGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLM-ELGIIGHV 301
A +F +G+G + VY + I A+K L L E+ I H+
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 302 CHPNTATLVGCCIE-NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHY 360
HPN L G + +YLI ++ G + L + Y + +A L Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSY 123
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
H +R+IHRDIK N+LLG E +I DFG + P+ + GT YL PE
Sbjct: 124 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTDLCGTLDYLPPE 176
Query: 421 YFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEG 480
+ DEK D+++ GVL E + G+ P +++ + + + E P
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY------QETYKRISRVEFTFPDFVT 230
Query: 481 EYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLE 513
E D + RL ++ + RP + EVLE
Sbjct: 231 EGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 116/242 (47%), Gaps = 26/242 (10%)
Query: 231 PLLTCFSYEEISSATNNFHSENMVGQGGYSEVYKGNLSDGRK----IAVKRLXXXXXXXX 286
P T + + ATN + +VG G + EV G L K +A+K L
Sbjct: 31 PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 287 XXXXFLMELGIIGHVCHPNTATLVGCCIENG-LYLIFNFSQNGNLDAAL--HDERSKSLE 343
FL E I+G HPN L G ++ + ++ + +NG+LD+ L HD + ++
Sbjct: 90 RRD-FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ 148
Query: 344 WPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNK-- 401
++ G+A G+ YL +HRD+ A N+L+ + +++DFGL++ L +
Sbjct: 149 ---LVGMLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 202
Query: 402 ---CTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPV-DSSRQN 456
T IPI T +PE + +DV+++G++L E+++ G +P + S Q+
Sbjct: 203 AAYTTRGGKIPIRWT----SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 258
Query: 457 LV 458
++
Sbjct: 259 VI 260
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 114/273 (41%), Gaps = 25/273 (9%)
Query: 244 ATNNFHSENMVGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLM-ELGIIGHV 301
A +F +G+G + VY + I A+K L L E+ I H+
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 302 CHPNTATLVGCCIE-NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHY 360
HPN L G + +YLI ++ G + L + Y + +A L Y
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSY 122
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
H +R+IHRDIK N+LLG E +I DFG + P+ + GT YL PE
Sbjct: 123 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPE 175
Query: 421 YFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEG 480
+ DEK D+++ GVL E + G+ P +++ + + + E P
Sbjct: 176 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT------YQETYKRISRVEFTFPDFVT 229
Query: 481 EYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLE 513
E D + RL ++ + RP + EVLE
Sbjct: 230 EGARDLISRL-------LKHNPSQRPMLREVLE 255
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 15/221 (6%)
Query: 244 ATNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVC 302
+ NF +G+G Y VYK N G +A+K++ + E+ ++ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 303 HPNTATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYL 361
HPN L+ EN LYL+F F +L + + P+ + + +GL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 362 HKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAP 419
H R++HRD+K N+L+ + ++ DFGLA+ +P + H + T Y AP
Sbjct: 120 HS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP 172
Query: 420 EYFMH-GIIDEKTDVFAFGVLLLEIITGRK--PVDSSRQNL 457
E + D+++ G + E++T R P DS L
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 213
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 114/273 (41%), Gaps = 25/273 (9%)
Query: 244 ATNNFHSENMVGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLM-ELGIIGHV 301
A +F +G+G + VY + I A+K L L E+ I H+
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 302 CHPNTATLVGCCIE-NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHY 360
HPN L G + +YLI ++ G + L + Y + +A L Y
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSY 127
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
H +R+IHRDIK N+LLG E +I DFG + P+ + GT YL PE
Sbjct: 128 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPE 180
Query: 421 YFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEG 480
+ DEK D+++ GVL E + G+ P +++ + + + E P
Sbjct: 181 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY------QETYKRISRVEFTFPDFVT 234
Query: 481 EYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLE 513
E D + RL ++ + RP + EVLE
Sbjct: 235 EGARDLISRL-------LKHNPSQRPMLREVLE 260
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 110/227 (48%), Gaps = 25/227 (11%)
Query: 246 NNFHSENMVGQGGYSEVYKGNLSDGRK----IAVKRLXXXXXXXXXXXXFLMELGIIGHV 301
N + +VG G + EV G L K +A+K L FL E I+G
Sbjct: 16 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQF 74
Query: 302 CHPNTATLVGCCIENG-LYLIFNFSQNGNLDAAL--HDERSKSLEWPIRYKIVLGVARGL 358
HPN L G ++ + ++ + +NG+LD+ L HD + ++ ++ G+A G+
Sbjct: 75 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ---LVGMLRGIASGM 131
Query: 359 HYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNK-----CTHHAAIPIEGT 413
YL +HRD+ A N+L+ + +++DFGL++ L + T IPI T
Sbjct: 132 KYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 188
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPV-DSSRQNLV 458
+PE + +DV+++G++L E+++ G +P + S Q+++
Sbjct: 189 ----SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 231
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 15/218 (6%)
Query: 247 NFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
NF +G+G Y VYK N G +A+K++ + E+ ++ + HPN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 306 TATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKG 364
L+ EN LYL+F F +L + + P+ + + +GL + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 121
Query: 365 CKRRIIHRDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAPEYF 422
R++HRD+K N+L+ + ++ DFGLA+ +P + H + T Y APE
Sbjct: 122 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAPEIL 175
Query: 423 MH-GIIDEKTDVFAFGVLLLEIITGRK--PVDSSRQNL 457
+ D+++ G + E++T R P DS L
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 213
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 15/221 (6%)
Query: 244 ATNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVC 302
+ NF +G+G Y VYK N G +A+K++ + E+ ++ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 303 HPNTATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYL 361
HPN L+ EN LYL+F F + +L + + P+ + + +GL +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEF-LSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 362 HKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAP 419
H R++HRD+K N+L+ + ++ DFGLA+ +P + H + T Y AP
Sbjct: 121 HS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP 173
Query: 420 EYFMH-GIIDEKTDVFAFGVLLLEIITGRK--PVDSSRQNL 457
E + D+++ G + E++T R P DS L
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 214
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 15/221 (6%)
Query: 244 ATNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVC 302
+ NF +G+G Y VYK N G +A+K++ + E+ ++ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 303 HPNTATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYL 361
HPN L+ EN LYL+F F + +L + + P+ + + +GL +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEF-LSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 362 HKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAP 419
H R++HRD+K N+L+ + ++ DFGLA+ +P + H + T Y AP
Sbjct: 123 HS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP 175
Query: 420 EYFMH-GIIDEKTDVFAFGVLLLEIITGRK--PVDSSRQNL 457
E + D+++ G + E++T R P DS L
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 216
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 114/273 (41%), Gaps = 25/273 (9%)
Query: 244 ATNNFHSENMVGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLM-ELGIIGHV 301
A +F +G+G + VY + I A+K L L E+ I H+
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 302 CHPNTATLVGCCIE-NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHY 360
HPN L G + +YLI ++ G + L + Y + +A L Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSY 126
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
H +R+IHRDIK N+LLG E +I DFG + P+ + GT YL PE
Sbjct: 127 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPE 179
Query: 421 YFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEG 480
+ DEK D+++ GVL E + G+ P +++ + + + E P
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT------YQETYKRISRVEFTFPDFVT 233
Query: 481 EYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLE 513
E D + RL ++ + RP + EVLE
Sbjct: 234 EGARDLISRL-------LKHNPSQRPMLREVLE 259
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 121/268 (45%), Gaps = 24/268 (8%)
Query: 254 VGQGGYSEVYK-GNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGI-IGHVCHPNTATLVG 311
+G+G Y V K ++ G+ +AVKR+ LM+L I + V P T T G
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKR-LLMDLDISMRTVDCPFTVTFYG 117
Query: 312 CCIENGLYLIFNFSQNGNLDAALHD--ERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRI 369
G I + +LD ++ +++ I KI + + + L +LH K +
Sbjct: 118 ALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS--KLSV 175
Query: 370 IHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDE 429
IHRD+K SNVL+ + ++ DFG++ +L + A G Y+APE + +
Sbjct: 176 IHRDVKPSNVLINALGQVKMCDFGISGYLVDSV---AKTIDAGCKPYMAPERINPELNQK 232
Query: 430 ----KTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEGEYDTD 485
K+D+++ G+ ++E+ R P DS W P + + E P L + +
Sbjct: 233 GYSVKSDIWSLGITMIELAILRFPYDS-------WGTPFQQLKQVVEEPSPQLPADKFSA 285
Query: 486 QMHRLVLIADYCVRQTSAWRPSMSEVLE 513
+ V C+++ S RP+ E+++
Sbjct: 286 E---FVDFTSQCLKKNSKERPTYPELMQ 310
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 114/273 (41%), Gaps = 25/273 (9%)
Query: 244 ATNNFHSENMVGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLM-ELGIIGHV 301
A +F +G+G + VY + I A+K L L E+ I H+
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 302 CHPNTATLVGCCIE-NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHY 360
HPN L G + +YLI ++ G + L + Y + +A L Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSY 124
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
H +R+IHRDIK N+LLG E +I DFG + P+ + GT YL PE
Sbjct: 125 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD----TLCGTLDYLPPE 177
Query: 421 YFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEG 480
+ DEK D+++ GVL E + G+ P +++ + + + E P
Sbjct: 178 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT------YQETYKRISRVEFTFPDFVT 231
Query: 481 EYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLE 513
E D + RL ++ + RP + EVLE
Sbjct: 232 EGARDLISRL-------LKHNPSQRPMLREVLE 257
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 116/242 (47%), Gaps = 26/242 (10%)
Query: 231 PLLTCFSYEEISSATNNFHSENMVGQGGYSEVYKGNLSDGRK----IAVKRLXXXXXXXX 286
P T + + ATN + +VG G + EV G L K +A+K L
Sbjct: 31 PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 287 XXXXFLMELGIIGHVCHPNTATLVGCCIENG-LYLIFNFSQNGNLDAAL--HDERSKSLE 343
FL E I+G HPN L G ++ + ++ + +NG+LD+ L HD + ++
Sbjct: 90 RRD-FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ 148
Query: 344 WPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNK-- 401
++ G+A G+ YL +HRD+ A N+L+ + +++DFGL++ L +
Sbjct: 149 ---LVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 202
Query: 402 ---CTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPV-DSSRQN 456
T IPI T +PE + +DV+++G++L E+++ G +P + S Q+
Sbjct: 203 AAYTTRGGKIPIRWT----SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 258
Query: 457 LV 458
++
Sbjct: 259 VI 260
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 135/290 (46%), Gaps = 49/290 (16%)
Query: 254 VGQGGYSEVYKGN------LSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHP-NT 306
+G+G + +V + + + R +AVK L + EL I+ H+ H N
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA-LMSELKILIHIGHHLNV 95
Query: 307 ATLVGCCIENG--LYLIFNFSQNGNLDAALHDERSK--------------SLEWPIRYKI 350
L+G C + G L +I F + GNL L +R++ +LE I Y
Sbjct: 96 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYS- 154
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL---PNKCTH-HA 406
VA+G+ +L R+ IHRD+ A N+LL +I DFGLA+ + P+ A
Sbjct: 155 -FQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 407 AIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLM 465
+P++ ++APE + ++DV++FGVLL EI + G P + + + +
Sbjct: 211 RLPLK----WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR--L 264
Query: 466 ESGNLTELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELL 515
+ G T + P +Y T +M++ +L C + RP+ SE++E L
Sbjct: 265 KEG--TRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHL 305
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 116/242 (47%), Gaps = 26/242 (10%)
Query: 231 PLLTCFSYEEISSATNNFHSENMVGQGGYSEVYKGNLSDGRK----IAVKRLXXXXXXXX 286
P T + + ATN + +VG G + EV G L K +A+K L
Sbjct: 31 PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 287 XXXXFLMELGIIGHVCHPNTATLVGCCIENG-LYLIFNFSQNGNLDAAL--HDERSKSLE 343
FL E I+G HPN L G ++ + ++ + +NG+LD+ L HD + ++
Sbjct: 90 RRD-FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ 148
Query: 344 WPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNK-- 401
++ G+A G+ YL +HRD+ A N+L+ + +++DFGL++ L +
Sbjct: 149 ---LVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 202
Query: 402 ---CTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPV-DSSRQN 456
T IPI T +PE + +DV+++G++L E+++ G +P + S Q+
Sbjct: 203 AAYTTRGGKIPIRWT----SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 258
Query: 457 LV 458
++
Sbjct: 259 VI 260
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 116/242 (47%), Gaps = 26/242 (10%)
Query: 231 PLLTCFSYEEISSATNNFHSENMVGQGGYSEVYKGNLSDGRK----IAVKRLXXXXXXXX 286
P T + + ATN + +VG G + EV G L K +A+K L
Sbjct: 31 PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 287 XXXXFLMELGIIGHVCHPNTATLVGCCIENG-LYLIFNFSQNGNLDAAL--HDERSKSLE 343
FL E I+G HPN L G ++ + ++ + +NG+LD+ L HD + ++
Sbjct: 90 RRD-FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ 148
Query: 344 WPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNK-- 401
++ G+A G+ YL +HRD+ A N+L+ + +++DFGL++ L +
Sbjct: 149 ---LVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 202
Query: 402 ---CTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPV-DSSRQN 456
T IPI T +PE + +DV+++G++L E+++ G +P + S Q+
Sbjct: 203 AAYTTRGGKIPIRWT----SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 258
Query: 457 LV 458
++
Sbjct: 259 VI 260
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 116/242 (47%), Gaps = 26/242 (10%)
Query: 231 PLLTCFSYEEISSATNNFHSENMVGQGGYSEVYKGNLSDGRK----IAVKRLXXXXXXXX 286
P T + + ATN + +VG G + EV G L K +A+K L
Sbjct: 31 PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 287 XXXXFLMELGIIGHVCHPNTATLVGCCIENG-LYLIFNFSQNGNLDAAL--HDERSKSLE 343
FL E I+G HPN L G ++ + ++ + +NG+LD+ L HD + ++
Sbjct: 90 RRD-FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ 148
Query: 344 WPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNK-- 401
++ G+A G+ YL +HRD+ A N+L+ + +++DFGL++ L +
Sbjct: 149 ---LVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 202
Query: 402 ---CTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPV-DSSRQN 456
T IPI T +PE + +DV+++G++L E+++ G +P + S Q+
Sbjct: 203 AAYTTRGGKIPIRWT----SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 258
Query: 457 LV 458
++
Sbjct: 259 VI 260
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 114/273 (41%), Gaps = 25/273 (9%)
Query: 244 ATNNFHSENMVGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLM-ELGIIGHV 301
A +F +G+G + VY + I A+K L L E+ I H+
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 302 CHPNTATLVGCCIE-NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHY 360
HPN L G + +YLI ++ G + L + Y + +A L Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSY 123
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
H +R+IHRDIK N+LLG E +I DFG + P+ + GT YL PE
Sbjct: 124 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTXLCGTLDYLPPE 176
Query: 421 YFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEG 480
+ DEK D+++ GVL E + G+ P +++ + + + E P
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT------YQETYKRISRVEFTFPDFVT 230
Query: 481 EYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLE 513
E D + RL ++ + RP + EVLE
Sbjct: 231 EGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 15/221 (6%)
Query: 244 ATNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVC 302
+ NF +G+G Y VYK N G +A+K++ + E+ ++ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 303 HPNTATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYL 361
HPN L+ EN LYL+F F + +L + + P+ + + +GL +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEF-LSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 362 HKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAP 419
H R++HRD+K N+L+ + ++ DFGLA+ +P + H + T Y AP
Sbjct: 123 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP 175
Query: 420 EYFMH-GIIDEKTDVFAFGVLLLEIITGRK--PVDSSRQNL 457
E + D+++ G + E++T R P DS L
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 216
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 114/273 (41%), Gaps = 25/273 (9%)
Query: 244 ATNNFHSENMVGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLM-ELGIIGHV 301
A +F +G+G + VY + I A+K L L E+ I H+
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 302 CHPNTATLVGCCIE-NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHY 360
HPN L G + +YLI ++ G + L + Y + +A L Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSY 123
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
H +R+IHRDIK N+LLG E +I DFG + P+ + GT YL PE
Sbjct: 124 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXXLCGTLDYLPPE 176
Query: 421 YFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEG 480
+ DEK D+++ GVL E + G+ P +++ + + + E P
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT------YQETYKRISRVEFTFPDFVT 230
Query: 481 EYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLE 513
E D + RL ++ + RP + EVLE
Sbjct: 231 EGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 15/221 (6%)
Query: 244 ATNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVC 302
+ NF +G+G Y VYK N G +A+K++ + E+ ++ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 303 HPNTATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYL 361
HPN L+ EN LYL+F F + +L + + P+ + + +GL +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEF-LSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 362 HKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAP 419
H R++HRD+K N+L+ + ++ DFGLA+ +P + H + T Y AP
Sbjct: 122 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP 174
Query: 420 EYFMH-GIIDEKTDVFAFGVLLLEIITGRK--PVDSSRQNL 457
E + D+++ G + E++T R P DS L
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 215
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 113/273 (41%), Gaps = 25/273 (9%)
Query: 244 ATNNFHSENMVGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLM-ELGIIGHV 301
A +F +G+G + VY + I A+K L L E+ I H+
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 302 CHPNTATLVGCCIE-NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHY 360
HPN L G + +YLI ++ G + L + Y + +A L Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSY 126
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
H +R+IHRDIK N+LLG E +I DFG + P+ GT YL PE
Sbjct: 127 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GTLDYLPPE 179
Query: 421 YFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEG 480
+ DEK D+++ GVL E + G+ P +++ + + + E P
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY------QETYKRISRVEFTFPDFVT 233
Query: 481 EYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLE 513
E D + RL ++ + RP + EVLE
Sbjct: 234 EGARDLISRL-------LKHNPSQRPMLREVLE 259
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 114/273 (41%), Gaps = 25/273 (9%)
Query: 244 ATNNFHSENMVGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLM-ELGIIGHV 301
A +F +G+G + VY + I A+K L L E+ I H+
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 302 CHPNTATLVGCCIE-NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHY 360
HPN L G + +YLI ++ G + L + Y + +A L Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSY 126
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
H +R+IHRDIK N+LLG E +I DFG + P+ + GT YL PE
Sbjct: 127 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXXLCGTLDYLPPE 179
Query: 421 YFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEG 480
+ DEK D+++ GVL E + G+ P +++ + + + E P
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT------YQETYKRISRVEFTFPDFVT 233
Query: 481 EYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLE 513
E D + RL ++ + RP + EVLE
Sbjct: 234 EGARDLISRL-------LKHNPSQRPMLREVLE 259
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 116/242 (47%), Gaps = 26/242 (10%)
Query: 231 PLLTCFSYEEISSATNNFHSENMVGQGGYSEVYKGNLSDGRK----IAVKRLXXXXXXXX 286
P T + + ATN + +VG G + EV G L K +A+K L
Sbjct: 29 PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 87
Query: 287 XXXXFLMELGIIGHVCHPNTATLVGCCIENG-LYLIFNFSQNGNLDAAL--HDERSKSLE 343
FL E I+G HPN L G ++ + ++ + +NG+LD+ L HD + ++
Sbjct: 88 RRD-FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ 146
Query: 344 WPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNK-- 401
++ G+A G+ YL +HRD+ A N+L+ + +++DFGL++ L +
Sbjct: 147 ---LVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 200
Query: 402 ---CTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPV-DSSRQN 456
T IPI T +PE + +DV+++G++L E+++ G +P + S Q+
Sbjct: 201 AAYTTRGGKIPIRWT----SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 256
Query: 457 LV 458
++
Sbjct: 257 VI 258
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 115/242 (47%), Gaps = 26/242 (10%)
Query: 231 PLLTCFSYEEISSATNNFHSENMVGQGGYSEVYKGNLSDGRK----IAVKRLXXXXXXXX 286
P T + + ATN + +VG G + EV G L K +A+K L
Sbjct: 31 PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 287 XXXXFLMELGIIGHVCHPNTATLVGCCIENG-LYLIFNFSQNGNLDAAL--HDERSKSLE 343
FL E I+G HPN L G ++ + ++ + +NG+LD+ L HD + ++
Sbjct: 90 RRD-FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ 148
Query: 344 WPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNK-- 401
++ G+A G+ YL +HRD+ A N+L+ + +++DFGL + L +
Sbjct: 149 ---LVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPE 202
Query: 402 ---CTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPV-DSSRQN 456
T IPI T +PE + +DV+++G++L E+++ G +P + S Q+
Sbjct: 203 AAYTTRGGKIPIRWT----SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 258
Query: 457 LV 458
++
Sbjct: 259 VI 260
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 97/217 (44%), Gaps = 8/217 (3%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLM-ELGIIGHVCH 303
+F ++G+G +S V L+ R+ A+K L ++ E ++ + H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 304 PNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLH 362
P L C ++ LY ++++NG L + + S + + L YLH
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLH 154
Query: 363 KGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF 422
+ IIHRD+K N+LL D QITDFG AK L + A GT Y++PE
Sbjct: 155 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 211
Query: 423 MHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVL 459
+ +D++A G ++ +++ G P + + L+
Sbjct: 212 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF 248
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 104/242 (42%), Gaps = 32/242 (13%)
Query: 247 NFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
N+ +G+G +++V ++ G+++AVK + E+ I+ + HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 306 TATLVGCC-IENGLYLIFNFSQNGNL-DAALHDERSKSLEWPIRYKIVLGVARGLHYLHK 363
L E LYL+ ++ G + D + R K E +++ ++ + H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH---- 130
Query: 364 GCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLP--NKCTHHAAIPIEGTFGYLAPEY 421
++ I+HRD+KA N+LL D +I DFG + NK P Y APE
Sbjct: 131 --QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAP-----PYAAPEL 183
Query: 422 FMHGIID-EKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEG 480
F D + DV++ GV+L +++G P D NL EL + L G
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ---------------NLKELRERVLRG 228
Query: 481 EY 482
+Y
Sbjct: 229 KY 230
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 136/290 (46%), Gaps = 47/290 (16%)
Query: 254 VGQGGYSEVYKGN------LSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHP-NT 306
+G+G + +V + + + R +AVK L + EL I+ H+ H N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA-LMSELKILIHIGHHLNV 84
Query: 307 ATLVGCCIENG--LYLIFNFSQNGNLDAALHDERSKSLEWPIR----YKIVLG------- 353
L+G C + G L +I F + GNL L +R++ + + + YK L
Sbjct: 85 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 354 ---VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL---PNKCTH-HA 406
VA+G+ +L R+ IHRD+ A N+LL +I DFGLA+ + P+ A
Sbjct: 145 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 407 AIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLM 465
+P++ ++APE + ++DV++FGVLL EI + G P + + + + L
Sbjct: 202 RLPLK----WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLK 256
Query: 466 ESGNLTELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELL 515
E T + P +Y T +M++ +L C + RP+ SE++E L
Sbjct: 257 EG---TRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHL 296
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 114/273 (41%), Gaps = 25/273 (9%)
Query: 244 ATNNFHSENMVGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLM-ELGIIGHV 301
A +F +G+G + VY + I A+K L L E+ I H+
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 302 CHPNTATLVGCCIE-NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHY 360
HPN L G + +YLI ++ G + L + Y + +A L Y
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSY 125
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
H +R+IHRDIK N+LLG E +I +FG + P+ + GT YL PE
Sbjct: 126 CHS---KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS----RRTTLCGTLDYLPPE 178
Query: 421 YFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEG 480
+ DEK D+++ GVL E + G+ P +++ + + + E P
Sbjct: 179 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT------YQETYKRISRVEFTFPDFVT 232
Query: 481 EYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLE 513
E D + RL ++ + RP + EVLE
Sbjct: 233 EGARDLISRL-------LKHNPSQRPMLREVLE 258
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 32/272 (11%)
Query: 245 TNNFHSENMVGQGGYSEVY--KGNLSDGRKIAVKRLXXXXXXXXX-XXXFLMELGIIGHV 301
++ + + ++G+G + EV K ++ G++ AVK + L E+ ++ +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 302 CHPNTATLVGCCIENG-LYLIFNFSQNGNL-DAALHDERSKSLEWPIRYKIVLGVARGLH 359
HPN L + G YL+ G L D + +R ++ +I+ V G+
Sbjct: 84 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIRQVLSGIT 140
Query: 360 YLHKGCKRRIIHRDIKASNVLL---GPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGY 416
Y+HK +I+HRD+K N+LL D +I DFGL+ I GT Y
Sbjct: 141 YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI---GTAYY 194
Query: 417 LAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDP 476
+APE +HG DEK DV++ GV+L +++G P + + + +L +E G T
Sbjct: 195 IAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDIL---KKVEKGKYT----- 245
Query: 477 SLEGEYDTDQMHRLVLIADYCVRQTSAWRPSM 508
++ Q ++ A +R+ + PSM
Sbjct: 246 -----FELPQWKKVSESAKDLIRKMLTYVPSM 272
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 21/206 (10%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC- 312
+G G + +VYK + +A ++ +++E+ I+ HPN L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELED-YMVEIDILASCDHPNIVKLLDAF 103
Query: 313 CIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVAR----GLHYLHKGCKRR 368
EN L+++ F G +DA + + LE P+ + V + L+YLH +
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLE-----LERPLTESQIQVVCKQTLDALNYLHDN---K 155
Query: 369 IIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGI-- 426
IIHRD+KA N+L D + ++ DFG++ N T GT ++APE M
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSA--KNTRTIQRRDSFIGTPYWMAPEVVMCETSK 213
Query: 427 ---IDEKTDVFAFGVLLLEIITGRKP 449
D K DV++ G+ L+E+ P
Sbjct: 214 DRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 32/272 (11%)
Query: 245 TNNFHSENMVGQGGYSEVY--KGNLSDGRKIAVKRLXXXXXXXXX-XXXFLMELGIIGHV 301
++ + + ++G+G + EV K ++ G++ AVK + L E+ ++ +
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 106
Query: 302 CHPNTATLVGCCIENG-LYLIFNFSQNGNL-DAALHDERSKSLEWPIRYKIVLGVARGLH 359
HPN L + G YL+ G L D + +R ++ +I+ V G+
Sbjct: 107 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIRQVLSGIT 163
Query: 360 YLHKGCKRRIIHRDIKASNVLL---GPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGY 416
Y+HK +I+HRD+K N+LL D +I DFGL+ I GT Y
Sbjct: 164 YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI---GTAYY 217
Query: 417 LAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDP 476
+APE +HG DEK DV++ GV+L +++G P + + + +L +E G T
Sbjct: 218 IAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDIL---KKVEKGKYT----- 268
Query: 477 SLEGEYDTDQMHRLVLIADYCVRQTSAWRPSM 508
++ Q ++ A +R+ + PSM
Sbjct: 269 -----FELPQWKKVSESAKDLIRKMLTYVPSM 295
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 114/273 (41%), Gaps = 25/273 (9%)
Query: 244 ATNNFHSENMVGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLM-ELGIIGHV 301
A +F +G+G + VY + I A+K L L E+ I H+
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 302 CHPNTATLVGCCIE-NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHY 360
HPN L G + +YLI ++ G + L + Y + +A L Y
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSY 120
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
H +R+IHRDIK N+LLG E +I DFG + P+ + GT YL PE
Sbjct: 121 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPE 173
Query: 421 YFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEG 480
+ DEK D+++ GVL E + G+ P +++ + + + E P
Sbjct: 174 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT------YQETYKRISRVEFTFPDFVT 227
Query: 481 EYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLE 513
E D + RL ++ + RP + EVLE
Sbjct: 228 EGARDLISRL-------LKHNPSQRPMLREVLE 253
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 136/290 (46%), Gaps = 47/290 (16%)
Query: 254 VGQGGYSEVYKGN------LSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHP-NT 306
+G+G + +V + + + R +AVK L + EL I+ H+ H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA-LMSELKILIHIGHHLNV 93
Query: 307 ATLVGCCIENG--LYLIFNFSQNGNLDAALHDERSKSLEWPIR----YKIVLG------- 353
L+G C + G L +I F + GNL L +R++ + + + YK L
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 354 ---VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL---PNKCTH-HA 406
VA+G+ +L R+ IHRD+ A N+LL +I DFGLA+ + P+ A
Sbjct: 154 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDA 210
Query: 407 AIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLM 465
+P++ ++APE + ++DV++FGVLL EI + G P + + + +
Sbjct: 211 RLPLK----WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR--L 264
Query: 466 ESGNLTELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELL 515
+ G T + P +Y T +M++ +L C + RP+ SE++E L
Sbjct: 265 KEG--TRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHL 305
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 136/290 (46%), Gaps = 47/290 (16%)
Query: 254 VGQGGYSEVYKGN------LSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHP-NT 306
+G+G + +V + + + R +AVK L + EL I+ H+ H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA-LMSELKILIHIGHHLNV 93
Query: 307 ATLVGCCIENG--LYLIFNFSQNGNLDAALHDERSKSLEWPIR----YKIVLG------- 353
L+G C + G L +I F + GNL L +R++ + + + YK L
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 354 ---VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL---PNKCTH-HA 406
VA+G+ +L R+ IHRD+ A N+LL +I DFGLA+ + P+ A
Sbjct: 154 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 407 AIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLM 465
+P++ ++APE + ++DV++FGVLL EI + G P + + + +
Sbjct: 211 RLPLK----WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR--L 264
Query: 466 ESGNLTELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELL 515
+ G T + P +Y T +M++ +L C + RP+ SE++E L
Sbjct: 265 KEG--TRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHL 305
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 32/272 (11%)
Query: 245 TNNFHSENMVGQGGYSEVY--KGNLSDGRKIAVKRLXXXXXXXXX-XXXFLMELGIIGHV 301
++ + + ++G+G + EV K ++ G++ AVK + L E+ ++ +
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 107
Query: 302 CHPNTATLVGCCIENG-LYLIFNFSQNGNL-DAALHDERSKSLEWPIRYKIVLGVARGLH 359
HPN L + G YL+ G L D + +R ++ +I+ V G+
Sbjct: 108 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIRQVLSGIT 164
Query: 360 YLHKGCKRRIIHRDIKASNVLL---GPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGY 416
Y+HK +I+HRD+K N+LL D +I DFGL+ I GT Y
Sbjct: 165 YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI---GTAYY 218
Query: 417 LAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDP 476
+APE +HG DEK DV++ GV+L +++G P + + + +L +E G T
Sbjct: 219 IAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDIL---KKVEKGKYT----- 269
Query: 477 SLEGEYDTDQMHRLVLIADYCVRQTSAWRPSM 508
++ Q ++ A +R+ + PSM
Sbjct: 270 -----FELPQWKKVSESAKDLIRKMLTYVPSM 296
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 136/290 (46%), Gaps = 47/290 (16%)
Query: 254 VGQGGYSEVYKGN------LSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHP-NT 306
+G+G + +V + + + R +AVK L + EL I+ H+ H N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA-LMSELKILIHIGHHLNV 84
Query: 307 ATLVGCCIENG--LYLIFNFSQNGNLDAALHDERSKSLEWPIR----YKIVLG------- 353
L+G C + G L +I F + GNL L +R++ + + + YK L
Sbjct: 85 VNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 354 ---VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL---PNKCTH-HA 406
VA+G+ +L R+ IHRD+ A N+LL +I DFGLA+ + P+ A
Sbjct: 145 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 407 AIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLM 465
+P++ ++APE + ++DV++FGVLL EI + G P + + + + L
Sbjct: 202 RLPLK----WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLK 256
Query: 466 ESGNLTELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELL 515
E T + P +Y T +M++ +L C + RP+ SE++E L
Sbjct: 257 EG---TRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHL 296
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 135/290 (46%), Gaps = 47/290 (16%)
Query: 254 VGQGGYSEVYKGN------LSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHP-NT 306
+G+G + +V + + + R +AVK L + EL I+ H+ H N
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA-LMSELKILIHIGHHLNV 130
Query: 307 ATLVGCCIENG--LYLIFNFSQNGNLDAALHDERSKSLEWPIR----YKIVLG------- 353
L+G C + G L +I F + GNL L +R++ + + + YK L
Sbjct: 131 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 190
Query: 354 ---VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTH----HA 406
VA+G+ +L R+ IHRD+ A N+LL +I DFGLA+ + + A
Sbjct: 191 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 247
Query: 407 AIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLM 465
+P++ ++APE + ++DV++FGVLL EI + G P + + + + L
Sbjct: 248 RLPLK----WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLK 302
Query: 466 ESGNLTELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELL 515
E T + P +Y T +M++ +L C + RP+ SE++E L
Sbjct: 303 EG---TRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHL 342
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 104/242 (42%), Gaps = 32/242 (13%)
Query: 247 NFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
N+ +G+G +++V ++ G+++AVK + E+ I+ + HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 306 TATLVGCC-IENGLYLIFNFSQNGNL-DAALHDERSKSLEWPIRYKIVLGVARGLHYLHK 363
L E LYL+ ++ G + D + R K E +++ ++ + H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH---- 130
Query: 364 GCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLP--NKCTHHAAIPIEGTFGYLAPEY 421
++ I+HRD+KA N+LL D +I DFG + NK P Y APE
Sbjct: 131 --QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSP-----PYAAPEL 183
Query: 422 FMHGIID-EKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEG 480
F D + DV++ GV+L +++G P D NL EL + L G
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ---------------NLKELRERVLRG 228
Query: 481 EY 482
+Y
Sbjct: 229 KY 230
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 100/218 (45%), Gaps = 24/218 (11%)
Query: 248 FHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNT 306
F +VG G Y +VYKG ++ G+ A+K + + L H H N
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSH--HRNI 83
Query: 307 ATLVGCCI-------ENGLYLIFNFSQNGNLDAALHDERSKSL--EWPIRYKIVLGVARG 357
AT G I ++ L+L+ F G++ + + + +L EW I Y I + RG
Sbjct: 84 ATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEW-IAY-ICREILRG 141
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYL 417
L +LH+ ++IHRDIK NVLL + E ++ DFG++ L GT ++
Sbjct: 142 LSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI--GTPYWM 196
Query: 418 APEYFM-----HGIIDEKTDVFAFGVLLLEIITGRKPV 450
APE D K+D+++ G+ +E+ G P+
Sbjct: 197 APEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 135/290 (46%), Gaps = 47/290 (16%)
Query: 254 VGQGGYSEVYKGN------LSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHP-NT 306
+G+G + +V + + + R +AVK L + EL I+ H+ H N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA-LMSELKILIHIGHHLNV 84
Query: 307 ATLVGCCIENG--LYLIFNFSQNGNLDAALHDERSKSLEWPIR----YKIVLG------- 353
L+G C + G L +I F + GNL L +R++ + + + YK L
Sbjct: 85 VNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 354 ---VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTH----HA 406
VA+G+ +L R+ IHRD+ A N+LL +I DFGLA+ + + A
Sbjct: 145 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 407 AIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLM 465
+P++ ++APE + ++DV++FGVLL EI + G P + + + + L
Sbjct: 202 RLPLK----WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLK 256
Query: 466 ESGNLTELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELL 515
E T + P +Y T +M++ +L C + RP+ SE++E L
Sbjct: 257 EG---TRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHL 296
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 135/290 (46%), Gaps = 47/290 (16%)
Query: 254 VGQGGYSEVYKGN------LSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHP-NT 306
+G+G + +V + + + R +AVK L + EL I+ H+ H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA-LMSELKILIHIGHHLNV 93
Query: 307 ATLVGCCIENG--LYLIFNFSQNGNLDAALHDERSKSLEWPIR----YKIVLG------- 353
L+G C + G L +I F + GNL L +R++ + + + YK L
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 354 ---VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTH----HA 406
VA+G+ +L R+ IHRD+ A N+LL +I DFGLA+ + + A
Sbjct: 154 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 210
Query: 407 AIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLM 465
+P++ ++APE + ++DV++FGVLL EI + G P + + + +
Sbjct: 211 RLPLK----WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR--L 264
Query: 466 ESGNLTELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELL 515
+ G T + P +Y T +M++ +L C + RP+ SE++E L
Sbjct: 265 KEG--TRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHL 305
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 120/268 (44%), Gaps = 24/268 (8%)
Query: 254 VGQGGYSEVYK-GNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGI-IGHVCHPNTATLVG 311
+G+G Y V K ++ G+ +AVKR+ LM+L I + V P T T G
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKR-LLMDLDISMRTVDCPFTVTFYG 73
Query: 312 CCIENGLYLIFNFSQNGNLDAALHD--ERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRI 369
G I + +LD ++ +++ I KI + + + L +LH K +
Sbjct: 74 ALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS--KLSV 131
Query: 370 IHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDE 429
IHRD+K SNVL+ + ++ DFG++ +L + G Y+APE + +
Sbjct: 132 IHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID---AGCKPYMAPERINPELNQK 188
Query: 430 ----KTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEGEYDTD 485
K+D+++ G+ ++E+ R P DS W P + + E P L + +
Sbjct: 189 GYSVKSDIWSLGITMIELAILRFPYDS-------WGTPFQQLKQVVEEPSPQLPADKFSA 241
Query: 486 QMHRLVLIADYCVRQTSAWRPSMSEVLE 513
+ V C+++ S RP+ E+++
Sbjct: 242 E---FVDFTSQCLKKNSKERPTYPELMQ 266
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 104/242 (42%), Gaps = 32/242 (13%)
Query: 247 NFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
N+ +G+G +++V ++ G+++AVK + E+ I+ + HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 306 TATLVGCC-IENGLYLIFNFSQNGNL-DAALHDERSKSLEWPIRYKIVLGVARGLHYLHK 363
L E LYL+ ++ G + D + R K E +++ ++ + H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH---- 130
Query: 364 GCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLP--NKCTHHAAIPIEGTFGYLAPEY 421
++ I+HRD+KA N+LL D +I DFG + NK P Y APE
Sbjct: 131 --QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSP-----PYAAPEL 183
Query: 422 FMHGIID-EKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEG 480
F D + DV++ GV+L +++G P D NL EL + L G
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ---------------NLKELRERVLRG 228
Query: 481 EY 482
+Y
Sbjct: 229 KY 230
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 111/220 (50%), Gaps = 19/220 (8%)
Query: 251 ENMVGQGGYSEVYKGNL-SDGRK---IAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNT 306
E ++G G + EV +G L + G+K +A+K L FL E I+G HPN
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRRE-FLSEASIMGQFEHPNI 77
Query: 307 ATLVGCCIENGLYLIFN-FSQNGNLDA--ALHDERSKSLEWPIRYKIVLGVARGLHYLHK 363
L G + +I F +NG LD+ L+D + ++ ++ G+A G+ YL
Sbjct: 78 IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQ---LVGMLRGIASGMRYL-- 132
Query: 364 GCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKC---THHAAIPIEGTFGYLAPE 420
+ +HRD+ A N+L+ + +++DFGL+++L T+ +++ + + APE
Sbjct: 133 -AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPE 191
Query: 421 YFMHGIIDEKTDVFAFGVLLLEIIT-GRKPV-DSSRQNLV 458
+D +++G+++ E+++ G +P D S Q+++
Sbjct: 192 AIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVI 231
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 32/242 (13%)
Query: 247 NFHSENMVGQGGYSEV-YKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
N+ +G+G +++V ++ G+++AV+ + E+ I+ + HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 306 TATLVGCC-IENGLYLIFNFSQNGNL-DAALHDERSKSLEWPIRYKIVLGVARGLHYLHK 363
L E LYL+ ++ G + D + R K E +++ ++ + H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH---- 130
Query: 364 GCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLP--NKCTHHAAIPIEGTFGYLAPEY 421
++ I+HRD+KA N+LL D +I DFG + NK P Y APE
Sbjct: 131 --QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSP-----PYAAPEL 183
Query: 422 FMHGIID-EKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEG 480
F D + DV++ GV+L +++G P D NL EL + L G
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ---------------NLKELRERVLRG 228
Query: 481 EY 482
+Y
Sbjct: 229 KY 230
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 111/218 (50%), Gaps = 15/218 (6%)
Query: 251 ENMVGQGGYSEVYKGNLS-DGRK---IAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNT 306
E ++G G + EV G+L G++ +A+K L FL E I+G HPN
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRD-FLSEASIMGQFDHPNV 70
Query: 307 ATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGC 365
L G ++ + +I F +NG+LD+ L + + ++ G+A G+ YL
Sbjct: 71 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQL-VGMLRGIAAGMKYL---A 126
Query: 366 KRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKC---THHAAIPIEGTFGYLAPEYF 422
+HR + A N+L+ + +++DFGL+++L + T+ +A+ + + APE
Sbjct: 127 DMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 186
Query: 423 MHGIIDEKTDVFAFGVLLLEIIT-GRKPV-DSSRQNLV 458
+ +DV+++G+++ E+++ G +P D + Q+++
Sbjct: 187 QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVI 224
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 32/272 (11%)
Query: 245 TNNFHSENMVGQGGYSEVY--KGNLSDGRKIAVKRLXXXXXXXXX-XXXFLMELGIIGHV 301
++ + + ++G+G + EV K ++ G++ AVK + L E+ ++ +
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 89
Query: 302 CHPNTATLVGCCIENG-LYLIFNFSQNGNL-DAALHDERSKSLEWPIRYKIVLGVARGLH 359
HPN L + G YL+ G L D + +R ++ +I+ V G+
Sbjct: 90 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIRQVLSGIT 146
Query: 360 YLHKGCKRRIIHRDIKASNVLL---GPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGY 416
Y+HK +I+HRD+K N+LL D +I DFGL+ I GT Y
Sbjct: 147 YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI---GTAYY 200
Query: 417 LAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDP 476
+APE +HG DEK DV++ GV+L +++G P + + + +L +E G T
Sbjct: 201 IAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDIL---KKVEKGKYT----- 251
Query: 477 SLEGEYDTDQMHRLVLIADYCVRQTSAWRPSM 508
++ Q ++ A +R+ + PSM
Sbjct: 252 -----FELPQWKKVSESAKDLIRKMLTYVPSM 278
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 25/227 (11%)
Query: 246 NNFHSENMVGQGGYSEVYKGNLSDGRK----IAVKRLXXXXXXXXXXXXFLMELGIIGHV 301
N + +VG G + EV G L K +A+K L FL E I+G
Sbjct: 16 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQF 74
Query: 302 CHPNTATLVGCCIENG-LYLIFNFSQNGNLDAAL--HDERSKSLEWPIRYKIVLGVARGL 358
HPN L G ++ + ++ +NG+LD+ L HD + ++ ++ G+A G+
Sbjct: 75 DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQ---LVGMLRGIASGM 131
Query: 359 HYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNK-----CTHHAAIPIEGT 413
YL +HRD+ A N+L+ + +++DFGL++ L + T IPI T
Sbjct: 132 KYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 188
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPV-DSSRQNLV 458
+PE + +DV+++G++L E+++ G +P + S Q+++
Sbjct: 189 ----SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 231
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 135/290 (46%), Gaps = 47/290 (16%)
Query: 254 VGQGGYSEVYKGN------LSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHP-NT 306
+G+G + +V + + + R +AVK L + EL I+ H+ H N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA-LMSELKILIHIGHHLNV 84
Query: 307 ATLVGCCIENG--LYLIFNFSQNGNLDAALHDERSKSLEWPIR----YKIVLG------- 353
L+G C + G L +I F + GNL L +R++ + + + YK L
Sbjct: 85 VNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 354 ---VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTH----HA 406
VA+G+ +L R+ IHRD+ A N+LL +I DFGLA+ + + A
Sbjct: 145 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 407 AIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLM 465
+P++ ++APE + ++DV++FGVLL EI + G P + + + + L
Sbjct: 202 RLPLK----WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLK 256
Query: 466 ESGNLTELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELL 515
E T + P +Y T +M++ +L C + RP+ SE++E L
Sbjct: 257 EG---TRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHL 296
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 109/224 (48%), Gaps = 27/224 (12%)
Query: 251 ENMVGQGGYSEVYKGNL-SDGRK---IAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNT 306
E ++G G + EV +G L + G+K +A+K L FL E I+G HPN
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRRE-FLSEASIMGQFEHPNI 79
Query: 307 ATLVGCCIENGLYLIFN-FSQNGNLDA--ALHDERSKSLEWPIRYKIVLGVARGLHYLHK 363
L G + +I F +NG LD+ L+D + ++ ++ G+A G+ YL
Sbjct: 80 IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQL---VGMLRGIASGMRYL-- 134
Query: 364 GCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTH-------HAAIPIEGTFGY 416
+ +HRD+ A N+L+ + +++DFGL+++L + IPI T
Sbjct: 135 -AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWT--- 190
Query: 417 LAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPV-DSSRQNLV 458
APE +D +++G+++ E+++ G +P D S Q+++
Sbjct: 191 -APEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVI 233
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 114/273 (41%), Gaps = 25/273 (9%)
Query: 244 ATNNFHSENMVGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLM-ELGIIGHV 301
A +F +G+G + VY + I A+K L L E+ I H+
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 302 CHPNTATLVGCCIE-NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHY 360
HPN L G + +YLI ++ G + L + Y + +A L Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSY 126
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
H +R+IHRDIK N+LLG E +I +FG + P+ + GT YL PE
Sbjct: 127 CHS---KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS----RRTTLCGTLDYLPPE 179
Query: 421 YFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEG 480
+ DEK D+++ GVL E + G+ P +++ + + + E P
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT------YQETYKRISRVEFTFPDFVT 233
Query: 481 EYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLE 513
E D + RL ++ + RP + EVLE
Sbjct: 234 EGARDLISRL-------LKHNPSQRPMLREVLE 259
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 15/218 (6%)
Query: 247 NFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
NF +G+G Y VYK N G +A+ ++ + E+ ++ + HPN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 306 TATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKG 364
L+ EN LYL+F F +L + + P+ + + +GL + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 121
Query: 365 CKRRIIHRDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAPEYF 422
R++HRD+K N+L+ + ++ DFGLA+ +P + H + T Y APE
Sbjct: 122 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAPEIL 175
Query: 423 MH-GIIDEKTDVFAFGVLLLEIITGRK--PVDSSRQNL 457
+ D+++ G + E++T R P DS L
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 213
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 15/218 (6%)
Query: 247 NFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
NF +G+G Y VYK N G +A+ ++ + E+ ++ + HPN
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 306 TATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKG 364
L+ EN LYL+F F +L + + P+ + + +GL + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 120
Query: 365 CKRRIIHRDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAPEYF 422
R++HRD+K N+L+ + ++ DFGLA+ +P + H + T Y APE
Sbjct: 121 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAPEIL 174
Query: 423 MH-GIIDEKTDVFAFGVLLLEIITGRK--PVDSSRQNL 457
+ D+++ G + E++T R P DS L
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 212
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 100/227 (44%), Gaps = 19/227 (8%)
Query: 239 EEISSATNNFHSENMVGQGGYSEVYKGNLS--DGR--KIAVKRLXXXXXXXXXXXXFLME 294
E++ F M+G+G + V + L DG K+AVK L FL E
Sbjct: 16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLRE 75
Query: 295 LGIIGHVCHPNTATLVGCCIENGL-------YLIFNFSQNGNLDAALHDER--SKSLEWP 345
+ HP+ A LVG + + +I F ++G+L A L R P
Sbjct: 76 AACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLP 135
Query: 346 IR--YKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCT 403
++ + ++ +A G+ YL R IHRD+ A N +L D + DFGL++ + +
Sbjct: 136 LQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDY 192
Query: 404 HHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKP 449
+ + +LA E + +DV+AFGV + EI+T G+ P
Sbjct: 193 YRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 115/242 (47%), Gaps = 26/242 (10%)
Query: 231 PLLTCFSYEEISSATNNFHSENMVGQGGYSEVYKGNLSDGRK----IAVKRLXXXXXXXX 286
P T + + ATN + +VG G + EV G L K +A+K L
Sbjct: 31 PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 287 XXXXFLMELGIIGHVCHPNTATLVGCCIENG-LYLIFNFSQNGNLDAAL--HDERSKSLE 343
FL E I+G HPN L G ++ + ++ +NG+LD+ L HD + ++
Sbjct: 90 RRD-FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQ 148
Query: 344 WPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNK-- 401
++ G+A G+ YL +HRD+ A N+L+ + +++DFGL++ L +
Sbjct: 149 ---LVGMLRGIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 202
Query: 402 ---CTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPV-DSSRQN 456
T IPI T +PE + +DV+++G++L E+++ G +P + S Q+
Sbjct: 203 AAYTTRGGKIPIRWT----SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 258
Query: 457 LV 458
++
Sbjct: 259 VI 260
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 135/291 (46%), Gaps = 50/291 (17%)
Query: 254 VGQGGYSEVYKGN------LSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHP-NT 306
+G+G + +V + + + R +AVK L + EL I+ H+ H N
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA-LMSELKILIHIGHHLNV 94
Query: 307 ATLVGCCIENG--LYLIFNFSQNGNLDAALHDERSK---------------SLEWPIRYK 349
L+G C + G L +I F + GNL L +R++ +LE I Y
Sbjct: 95 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYS 154
Query: 350 IVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL---PNKCTH-H 405
VA+G+ +L R+ IHRD+ A N+LL +I DFGLA+ + P+
Sbjct: 155 --FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 406 AAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPL 464
A +P++ ++APE + ++DV++FGVLL EI + G P + + +
Sbjct: 210 ARLPLK----WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR-- 263
Query: 465 MESGNLTELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELL 515
++ G T + P +Y T +M++ +L C + RP+ SE++E L
Sbjct: 264 LKEG--TRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHL 305
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 115/242 (47%), Gaps = 26/242 (10%)
Query: 231 PLLTCFSYEEISSATNNFHSENMVGQGGYSEVYKGNLSDGRK----IAVKRLXXXXXXXX 286
P T + + ATN + +VG G + EV G L K +A+K L
Sbjct: 31 PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 287 XXXXFLMELGIIGHVCHPNTATLVGCCIENG-LYLIFNFSQNGNLDAAL--HDERSKSLE 343
FL E I+G HPN L G ++ + ++ +NG+LD+ L HD + ++
Sbjct: 90 RRD-FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQ 148
Query: 344 WPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNK-- 401
++ G+A G+ YL +HRD+ A N+L+ + +++DFGL++ L +
Sbjct: 149 ---LVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 202
Query: 402 ---CTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPV-DSSRQN 456
T IPI T +PE + +DV+++G++L E+++ G +P + S Q+
Sbjct: 203 AAYTTRGGKIPIRWT----SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 258
Query: 457 LV 458
++
Sbjct: 259 VI 260
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 32/242 (13%)
Query: 247 NFHSENMVGQGGYSEV-YKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
N+ +G+G +++V ++ G+++AV+ + E+ I+ + HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 306 TATLVGCC-IENGLYLIFNFSQNGNL-DAALHDERSKSLEWPIRYKIVLGVARGLHYLHK 363
L E LYL+ ++ G + D + R K E +++ ++ + H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH---- 130
Query: 364 GCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLP--NKCTHHAAIPIEGTFGYLAPEY 421
++ I+HRD+KA N+LL D +I DFG + NK P Y APE
Sbjct: 131 --QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSP-----PYAAPEL 183
Query: 422 FMHGIID-EKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEG 480
F D + DV++ GV+L +++G P D NL EL + L G
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ---------------NLKELRERVLRG 228
Query: 481 EY 482
+Y
Sbjct: 229 KY 230
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 15/218 (6%)
Query: 247 NFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
NF +G+G Y VYK N G +A+K++ + E+ ++ + HPN
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 306 TATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKG 364
L+ EN LYL+F +L + + P+ + + +GL + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEHVHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 120
Query: 365 CKRRIIHRDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAPEYF 422
R++HRD+K N+L+ + ++ DFGLA+ +P + H + T Y APE
Sbjct: 121 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAPEIL 174
Query: 423 MH-GIIDEKTDVFAFGVLLLEIITGRK--PVDSSRQNL 457
+ D+++ G + E++T R P DS L
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 212
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 98/221 (44%), Gaps = 15/221 (6%)
Query: 244 ATNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVC 302
+ NF +G+G Y VYK N G +A+K++ + E+ ++ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 303 HPNTATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYL 361
HPN L+ EN LYL+F + +L + + P+ + + +GL +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFE-HVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 362 HKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAP 419
H R++HRD+K N+L+ + ++ DFGLA+ +P + H + T Y AP
Sbjct: 123 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP 175
Query: 420 EYFMH-GIIDEKTDVFAFGVLLLEIITGRK--PVDSSRQNL 457
E + D+++ G + E++T R P DS L
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 216
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 134/292 (45%), Gaps = 51/292 (17%)
Query: 254 VGQGGYSEVYKGN------LSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHP-NT 306
+G+G + +V + + + R +AVK L + EL I+ H+ H N
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA-LMSELKILIHIGHHLNV 95
Query: 307 ATLVGCCIENG--LYLIFNFSQNGNLDAALHDERSK----------------SLEWPIRY 348
L+G C + G L +I F + GNL L +R++ +LE I Y
Sbjct: 96 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICY 155
Query: 349 KIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTH---- 404
VA+G+ +L R+ IHRD+ A N+LL +I DFGLA+ + +
Sbjct: 156 S--FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 210
Query: 405 HAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKP 463
A +P++ ++APE + ++DV++FGVLL EI + G P + + +
Sbjct: 211 DARLPLK----WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR- 265
Query: 464 LMESGNLTELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELL 515
++ G T + P +Y T +M++ +L C + RP+ SE++E L
Sbjct: 266 -LKEG--TRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHL 307
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 106/223 (47%), Gaps = 19/223 (8%)
Query: 245 TNNFHSENMVGQGGYSEVY--KGNLSDGRKIAVKRLXXXXXXXXX-XXXFLMELGIIGHV 301
++ + + ++G+G + EV K ++ G++ AVK + L E+ ++ +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 302 CHPNTATLVGCCIENG-LYLIFNFSQNGNL-DAALHDERSKSLEWPIRYKIVLGVARGLH 359
HPN L + G YL+ G L D + +R ++ +I+ V G+
Sbjct: 84 DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIRQVLSGIT 140
Query: 360 YLHKGCKRRIIHRDIKASNVLL---GPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGY 416
Y HK +I+HRD+K N+LL D +I DFGL+ I GT Y
Sbjct: 141 YXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKI---GTAYY 194
Query: 417 LAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVL 459
+APE +HG DEK DV++ GV+L +++G P + + + +L
Sbjct: 195 IAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDIL 236
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 93/216 (43%), Gaps = 24/216 (11%)
Query: 246 NNFHSENMVGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLM-ELGIIGHVCH 303
++F +G+G + VY + I A+K L L E+ I H+ H
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 304 PNTATLVGCCIENG-LYLIFNFSQNGNLDAALH------DERSKSLEWPIRYKIVLGVAR 356
PN + + +YL+ F+ G L L ++RS + + +A
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF--------MEELAD 125
Query: 357 GLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGY 416
LHY H+ R++IHRDIK N+L+G E +I DFG + P+ GT Y
Sbjct: 126 ALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC----GTLDY 178
Query: 417 LAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDS 452
L PE DEK D++ GVL E + G P DS
Sbjct: 179 LPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 214
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 93/216 (43%), Gaps = 24/216 (11%)
Query: 246 NNFHSENMVGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLM-ELGIIGHVCH 303
++F +G+G + VY + I A+K L L E+ I H+ H
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 304 PNTATLVGCCIENG-LYLIFNFSQNGNLDAALH------DERSKSLEWPIRYKIVLGVAR 356
PN + + +YL+ F+ G L L ++RS + + +A
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF--------MEELAD 125
Query: 357 GLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGY 416
LHY H+ R++IHRDIK N+L+G E +I DFG + P+ GT Y
Sbjct: 126 ALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC----GTLDY 178
Query: 417 LAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDS 452
L PE DEK D++ GVL E + G P DS
Sbjct: 179 LPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 214
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 76/166 (45%), Gaps = 22/166 (13%)
Query: 294 ELGIIGHVCHPNTATLVGCCIENG-LYLIFNFSQNGNLDAALH------DERSKSLEWPI 346
E+ I H+ HPN + + +YL+ F+ G L L ++RS +
Sbjct: 65 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF---- 120
Query: 347 RYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHA 406
+ +A LHY H+ R++IHRDIK N+L+G E +I DFG + P+
Sbjct: 121 ----MEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXM 173
Query: 407 AIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDS 452
GT YL PE DEK D++ GVL E + G P DS
Sbjct: 174 C----GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 215
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 107/214 (50%), Gaps = 23/214 (10%)
Query: 249 HSENMVGQGGYSEVYKGNLSDGRK----IAVKRLXXXXXXXXXXXXFLMELGIIGHVCHP 304
HS+ ++G+G + VY G D + A+K L FL E ++ + HP
Sbjct: 24 HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEA-FLREGLLMRGLNHP 82
Query: 305 NTATLVGCCI--ENGLYLIFNFSQNGNLDAALHD-ERSKSLEWPIRYKIVLGVARGLHYL 361
N L+G + E +++ + +G+L + +R+ +++ I + L VARG+ YL
Sbjct: 83 NVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFG--LQVARGMEYL 140
Query: 362 HKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTH------HAAIPIEGTFG 415
+++ +HRD+ A N +L F ++ DFGLA+ + ++ + HA +P++ T
Sbjct: 141 ---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWT-- 195
Query: 416 YLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
A E K+DV++FGVLL E++T P
Sbjct: 196 --ALESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 103/242 (42%), Gaps = 32/242 (13%)
Query: 247 NFHSENMVGQGGYSEV-YKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
N+ +G+G +++V ++ G+++AVK + E+ I + HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 306 TATLVGCC-IENGLYLIFNFSQNGNL-DAALHDERSKSLEWPIRYKIVLGVARGLHYLHK 363
L E LYL+ ++ G + D + R K E +++ ++ + H
Sbjct: 75 IVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCH---- 130
Query: 364 GCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLP--NKCTHHAAIPIEGTFGYLAPEY 421
++ I+HRD+KA N+LL D +I DFG + NK P Y APE
Sbjct: 131 --QKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAP-----PYAAPEL 183
Query: 422 FMHGIID-EKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEG 480
F D + DV++ GV+L +++G P D NL EL + L G
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ---------------NLKELRERVLRG 228
Query: 481 EY 482
+Y
Sbjct: 229 KY 230
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 98/210 (46%), Gaps = 14/210 (6%)
Query: 246 NNFHSENMVGQGGYSEVY---KGNLSDGRKI-AVKRLXXXXXXXXXXXXFLMELGIIGHV 301
+ F ++GQG + +V+ K + SD R++ A+K L ME I+ V
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 302 CHPNTATL-VGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHY 360
HP L E LYLI +F + G+L L E + E Y L +A L +
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALA--LDH 141
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHH-AAIPIEGTFGYLAP 419
LH II+RD+K N+LL + ++TDFGL+K H A GT Y+AP
Sbjct: 142 LHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMAP 195
Query: 420 EYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
E + D ++FGVL+ E++TG P
Sbjct: 196 EVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC- 312
+G G + +VYK + +A ++ +++E+ I+ HPN L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELED-YMVEIDILASCDHPNIVKLLDAF 103
Query: 313 CIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVAR----GLHYLHKGCKRR 368
EN L+++ F G +DA + + LE P+ + V + L+YLH +
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLE-----LERPLTESQIQVVCKQTLDALNYLHDN---K 155
Query: 369 IIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGI-- 426
IIHRD+KA N+L D + ++ DFG++ N GT ++APE M
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSA--KNTRXIQRRDSFIGTPYWMAPEVVMCETSK 213
Query: 427 ---IDEKTDVFAFGVLLLEIITGRKP 449
D K DV++ G+ L+E+ P
Sbjct: 214 DRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 119/249 (47%), Gaps = 47/249 (18%)
Query: 291 FLMELGIIGHVCHPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDERS---------- 339
L E ++ V HP+ L G C ++G L LI +++ G+L L + R
Sbjct: 73 LLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGG 132
Query: 340 ----KSLEWPIRYKIVLG--------VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEP 387
SL+ P + +G +++G+ YL + +++HRD+ A N+L+ +
Sbjct: 133 SRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKM 189
Query: 388 QITDFGLAKWLPNKCTH----HAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEI 443
+I+DFGL++ + + ++ IP++ ++A E I ++DV++FGVLL EI
Sbjct: 190 KISDFGLSRDVYEEDSYVKRSQGRIPVK----WMAIESLFDHIYTTQSDVWSFGVLLWEI 245
Query: 444 IT-GRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEGEYDTDQMHRLVLIADYCVRQTS 502
+T G P + L+++G+ E D +++M+RL+L C +Q
Sbjct: 246 VTLGGNPYPGIPPERLF---NLLKTGHRMERPDNC------SEEMYRLML---QCWKQEP 293
Query: 503 AWRPSMSEV 511
RP +++
Sbjct: 294 DKRPVFADI 302
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC- 312
+G G + +VYK + +A ++ +++E+ I+ HPN L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELED-YMVEIDILASCDHPNIVKLLDAF 103
Query: 313 CIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVAR----GLHYLHKGCKRR 368
EN L+++ F G +DA + + LE P+ + V + L+YLH +
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLE-----LERPLTESQIQVVCKQTLDALNYLHDN---K 155
Query: 369 IIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGI-- 426
IIHRD+KA N+L D + ++ DFG++ N GT ++APE M
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSA--KNTRXIQRRDXFIGTPYWMAPEVVMCETSK 213
Query: 427 ---IDEKTDVFAFGVLLLEIITGRKP 449
D K DV++ G+ L+E+ P
Sbjct: 214 DRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 8/217 (3%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLM-ELGIIGHVCH 303
+F ++G+G +S V L+ R+ A+K L ++ E ++ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 304 PNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLH 362
P L ++ LY ++++NG L + + S + + L YLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLH 149
Query: 363 KGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF 422
+ IIHRD+K N+LL D QITDFG AK L + A GT Y++PE
Sbjct: 150 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 423 MHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVL 459
+ +D++A G ++ +++ G P + + L+
Sbjct: 207 TEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIF 243
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 98/210 (46%), Gaps = 14/210 (6%)
Query: 246 NNFHSENMVGQGGYSEVY---KGNLSDGRKI-AVKRLXXXXXXXXXXXXFLMELGIIGHV 301
+ F ++GQG + +V+ K + SD R++ A+K L ME I+ V
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 84
Query: 302 CHPNTATL-VGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHY 360
HP L E LYLI +F + G+L L E + E Y L +A L +
Sbjct: 85 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALA--LDH 142
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHH-AAIPIEGTFGYLAP 419
LH II+RD+K N+LL + ++TDFGL+K H A GT Y+AP
Sbjct: 143 LHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMAP 196
Query: 420 EYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
E + D ++FGVL+ E++TG P
Sbjct: 197 EVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 98/210 (46%), Gaps = 14/210 (6%)
Query: 246 NNFHSENMVGQGGYSEVY---KGNLSDGRKI-AVKRLXXXXXXXXXXXXFLMELGIIGHV 301
+ F ++GQG + +V+ K + SD R++ A+K L ME I+ V
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 302 CHPNTATL-VGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHY 360
HP L E LYLI +F + G+L L E + E Y L +A L +
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALA--LDH 141
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHH-AAIPIEGTFGYLAP 419
LH II+RD+K N+LL + ++TDFGL+K H A GT Y+AP
Sbjct: 142 LHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMAP 195
Query: 420 EYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
E + D ++FGVL+ E++TG P
Sbjct: 196 EVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 78/165 (47%), Gaps = 20/165 (12%)
Query: 294 ELGIIGHVCHPNTATLVGCCIE-NGLYLIFNFSQNGNLDAALH-----DERSKSLEWPIR 347
E+ I H+ HPN L G + +YLI ++ G + L DE+ +
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTA------ 115
Query: 348 YKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAA 407
+ +A L Y H +R+IHRDIK N+LLG + E +I DFG + P+
Sbjct: 116 -TYITELANALSYCHS---KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSS----RR 167
Query: 408 IPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDS 452
+ GT YL PE + DEK D+++ GVL E + G P ++
Sbjct: 168 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEA 212
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 13/202 (6%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + +VYK + +A ++ +++E+ I+ HP L+G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELED-YIVEIEILATCDHPYIVKLLGAY 85
Query: 314 IENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHR 372
+G L+++ F G +DA + E + L P + + L++LH +RIIHR
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIML-ELDRGLTEPQIQVVCRQMLEALNFLHS---KRIIHR 141
Query: 373 DIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGII----- 427
D+KA NVL+ + + ++ DFG++ N T GT ++APE M +
Sbjct: 142 DLKAGNVLMTLEGDIRLADFGVSA--KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPY 199
Query: 428 DEKTDVFAFGVLLLEIITGRKP 449
D K D+++ G+ L+E+ P
Sbjct: 200 DYKADIWSLGITLIEMAQIEPP 221
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 115/261 (44%), Gaps = 21/261 (8%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G+G + EV+KG + +++ ++ E+ ++ G
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSY 90
Query: 314 IENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHR 372
++ L++I + G +AL R+ + ++ + +GL YLH K IHR
Sbjct: 91 LKGSKLWIIMEYLGGG---SALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKK---IHR 144
Query: 373 DIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTD 432
DIKA+NVLL + ++ DFG+A L + T GT ++APE D K D
Sbjct: 145 DIKAANVLLSEQGDVKLADFGVAGQLTD--TQIKRNTFVGTPFWMAPEVIQQSAYDSKAD 202
Query: 433 VFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEGEYDTDQMHRLVL 492
+++ G+ +E+ G P VL+ L+ N P+L G++ T +
Sbjct: 203 IWSLGITAIELAKGEPPNSDMHPMRVLF---LIPKNN-----PPTLVGDF-TKSFKEFI- 252
Query: 493 IADYCVRQTSAWRPSMSEVLE 513
D C+ + ++RP+ E+L+
Sbjct: 253 --DACLNKDPSFRPTAKELLK 271
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 92/203 (45%), Gaps = 16/203 (7%)
Query: 253 MVGQGGYSEVYK-GNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVG 311
M+G+G + EV K + ++ AVK + L E+ ++ + HPN L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 312 CCIENGLYLIFNFSQNGNLDAALHDE--RSKSLEWPIRYKIVLGVARGLHYLHKGCKRRI 369
++ + I G L DE + K +I+ V G+ Y+HK I
Sbjct: 89 ILEDSSSFYIVGELYTG---GELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK---HNI 142
Query: 370 IHRDIKASNVLLG---PDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGI 426
+HRD+K N+LL D + +I DFGL+ I GT Y+APE + G
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI---GTAYYIAPE-VLRGT 198
Query: 427 IDEKTDVFAFGVLLLEIITGRKP 449
DEK DV++ GV+L +++G P
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPP 221
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 110/243 (45%), Gaps = 34/243 (13%)
Query: 223 LSNKEKHQPLLTCFSYEEISSATNNFHSENMVGQGGYSEVYKGN-LSDGRKIAVK---RL 278
+S +Q LL E+ ++G G + VYKG + DG + + ++
Sbjct: 1 MSGAAPNQALLRILKETELRKV-------KVLGSGAFGTVYKGIWIPDGENVKIPVAIKV 53
Query: 279 XXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDER 338
L E ++ V P + L+G C+ + + L+ G L + + R
Sbjct: 54 LRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLTSTVQLVTQLMPYGCLLDHVRENR 113
Query: 339 SKS-----LEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFG 393
+ L W + +A+G+ YL R++HRD+ A NVL+ +ITDFG
Sbjct: 114 GRLGSQDLLNW------CMQIAKGMSYLED---VRLVHRDLAARNVLVKSPNHVKITDFG 164
Query: 394 LAKWLP-NKCTHHA---AIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRK 448
LA+ L ++ +HA +PI+ ++A E + ++DV+++GV + E++T G K
Sbjct: 165 LARLLDIDETEYHADGGKVPIK----WMALESILRRRFTHQSDVWSYGVTVWELMTFGAK 220
Query: 449 PVD 451
P D
Sbjct: 221 PYD 223
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 13/202 (6%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + +VYK + +A ++ +++E+ I+ HP L+G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELED-YIVEIEILATCDHPYIVKLLGAY 77
Query: 314 IENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHR 372
+G L+++ F G +DA + E + L P + + L++LH +RIIHR
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIML-ELDRGLTEPQIQVVCRQMLEALNFLHS---KRIIHR 133
Query: 373 DIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGII----- 427
D+KA NVL+ + + ++ DFG++ N T GT ++APE M +
Sbjct: 134 DLKAGNVLMTLEGDIRLADFGVSA--KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPY 191
Query: 428 DEKTDVFAFGVLLLEIITGRKP 449
D K D+++ G+ L+E+ P
Sbjct: 192 DYKADIWSLGITLIEMAQIEPP 213
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 8/216 (3%)
Query: 247 NFHSENMVGQGGYSEVYKGN-LSDGRKIAVKRLXXXXXXXXXXXXFLM-ELGIIGHVCHP 304
+F ++G+G +S V L+ R+ A+K L ++ E ++ + HP
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 305 NTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHK 363
L ++ LY ++++NG L + + S + + L YLH
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIR--KIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 364 GCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFM 423
+ IIHRD+K N+LL D QITDFG AK L + A GT Y++PE
Sbjct: 151 ---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 207
Query: 424 HGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVL 459
+ +D++A G ++ +++ G P + + L+
Sbjct: 208 EKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF 243
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 8/217 (3%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLM-ELGIIGHVCH 303
+F ++G+G +S V L+ R+ A+K L ++ E ++ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 304 PNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLH 362
P L ++ LY ++++NG L + + S + + L YLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLH 149
Query: 363 KGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF 422
+ IIHRD+K N+LL D QITDFG AK L + A GT Y++PE
Sbjct: 150 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 423 MHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVL 459
+ +D++A G ++ +++ G P + + L+
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIF 243
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 10/218 (4%)
Query: 246 NNFHSENMVGQGGYSEVYKGN-LSDGRKIAVKRLXXXXXXXXXXXXFLM-ELGIIGHVCH 303
+F ++G+G +S V L+ R+ A+K L ++ E ++ + H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 304 PNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLH 362
P L ++ LY ++++NG L + + S + + L YLH
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLH 127
Query: 363 -KGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEY 421
KG IIHRD+K N+LL D QITDFG AK L + A GT Y++PE
Sbjct: 128 GKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 183
Query: 422 FMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVL 459
+ +D++A G ++ +++ G P + + L+
Sbjct: 184 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF 221
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 143/318 (44%), Gaps = 59/318 (18%)
Query: 233 LTCFSYEEISSATNNFHSENMV-----GQGGYSEVYKGNLS--DGRK----IAVKRLXXX 281
L+ +++ + F +N+V G+G + +V K GR +AVK L
Sbjct: 5 LSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN 64
Query: 282 XXXXXXXXXFLMELGIIGHVCHPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDERS- 339
L E ++ V HP+ L G C ++G L LI +++ G+L L + R
Sbjct: 65 ASPSELRD-LLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKV 123
Query: 340 -------------KSLEWPIRYKIVLG--------VARGLHYLHKGCKRRIIHRDIKASN 378
SL+ P + +G +++G+ YL + +++HRD+ A N
Sbjct: 124 GPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARN 180
Query: 379 VLLGPDFEPQITDFGLAKWLPNKCTH----HAAIPIEGTFGYLAPEYFMHGIIDEKTDVF 434
+L+ + +I+DFGL++ + + + IP++ ++A E I ++DV+
Sbjct: 181 ILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVK----WMAIESLFDHIYTTQSDVW 236
Query: 435 AFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEGEYDTDQMHRLVLI 493
+FGVLL EI+T G P + L+++G+ E D +++M+RL+L
Sbjct: 237 SFGVLLWEIVTLGGNPYPGIPPERLF---NLLKTGHRMERPDNC------SEEMYRLML- 286
Query: 494 ADYCVRQTSAWRPSMSEV 511
C +Q RP +++
Sbjct: 287 --QCWKQEPDKRPVFADI 302
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 10/218 (4%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLM-ELGIIGHVCH 303
+F ++G+G +S V L+ R+ A+K L ++ E ++ + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 304 PNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLH 362
P L ++ LY ++++NG L + + S + + L YLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLH 147
Query: 363 -KGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEY 421
KG IIHRD+K N+LL D QITDFG AK L + A GT Y++PE
Sbjct: 148 GKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPEL 203
Query: 422 FMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVL 459
+ +D++A G ++ +++ G P + + L+
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF 241
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 8/217 (3%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLM-ELGIIGHVCH 303
+F ++G+G +S V L+ R+ A+K L ++ E ++ + H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 304 PNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLH 362
P L ++ LY ++++NG L + + S + + L YLH
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLH 150
Query: 363 KGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF 422
+ IIHRD+K N+LL D QITDFG AK L + A GT Y++PE
Sbjct: 151 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 207
Query: 423 MHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVL 459
+ +D++A G ++ +++ G P + + L+
Sbjct: 208 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF 244
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 10/218 (4%)
Query: 246 NNFHSENMVGQGGYSEVYKGN-LSDGRKIAVKRLXXXXXXXXXXXXFLM-ELGIIGHVCH 303
+F ++G+G +S V L+ R+ A+K L ++ E ++ + H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 304 PNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLH 362
P L ++ LY ++++NG L + + S + + L YLH
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLH 126
Query: 363 -KGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEY 421
KG IIHRD+K N+LL D QITDFG AK L + A GT Y++PE
Sbjct: 127 GKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 182
Query: 422 FMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVL 459
+ +D++A G ++ +++ G P + + L+
Sbjct: 183 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF 220
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 78/165 (47%), Gaps = 20/165 (12%)
Query: 294 ELGIIGHVCHPNTATLVGCCIE-NGLYLIFNFSQNGNLDAALH-----DERSKSLEWPIR 347
E+ I H+ HPN L G + +YLI ++ G + L DE+ +
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTA------ 115
Query: 348 YKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAA 407
+ +A L Y H +R+IHRDIK N+LLG + E +I DFG + P+
Sbjct: 116 -TYITELANALSYCHS---KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRD--- 168
Query: 408 IPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDS 452
+ GT YL PE + DEK D+++ GVL E + G P ++
Sbjct: 169 -TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEA 212
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 82/170 (48%), Gaps = 35/170 (20%)
Query: 303 HPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRYK------------ 349
H N L+G C +G +YLIF + G+L L +R K E I Y+
Sbjct: 108 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 167
Query: 350 ---------IVLGVARGLHYLH-KGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLP 399
VA+G+ +L K C +HRD+ A NVL+ +I DFGLA+ +
Sbjct: 168 VLTFEDLLCFAYQVAKGMEFLEFKSC----VHRDLAARNVLVTHGKVVKICDFGLARDIM 223
Query: 400 NKCTH----HAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
+ + +A +P++ ++APE GI K+DV+++G+LL EI +
Sbjct: 224 SDSNYVVRGNARLPVK----WMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 10/218 (4%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLM-ELGIIGHVCH 303
+F ++G+G +S V L+ R+ A+K L ++ E ++ + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 304 PNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLH 362
P L ++ LY ++++NG L + + S + + L YLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLH 147
Query: 363 -KGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEY 421
KG IIHRD+K N+LL D QITDFG AK L + A GT Y++PE
Sbjct: 148 GKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 422 FMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVL 459
+ +D++A G ++ +++ G P + + L+
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF 241
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 10/218 (4%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLM-ELGIIGHVCH 303
+F ++G+G +S V L+ R+ A+K L ++ E ++ + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 304 PNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLH 362
P L ++ LY ++++NG L + + S + + L YLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLH 147
Query: 363 -KGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEY 421
KG IIHRD+K N+LL D QITDFG AK L + A GT Y++PE
Sbjct: 148 GKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 422 FMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVL 459
+ +D++A G ++ +++ G P + + L+
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF 241
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 10/218 (4%)
Query: 246 NNFHSENMVGQGGYSEVYKGN-LSDGRKIAVKRLXXXXXXXXXXXXFLM-ELGIIGHVCH 303
+F ++G+G +S V L+ R+ A+K L ++ E ++ + H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 304 PNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLH 362
P L ++ LY ++++NG L + + S + + L YLH
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLH 125
Query: 363 -KGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEY 421
KG IIHRD+K N+LL D QITDFG AK L + A GT Y++PE
Sbjct: 126 GKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 181
Query: 422 FMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVL 459
+ +D++A G ++ +++ G P + + L+
Sbjct: 182 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF 219
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 8/217 (3%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLM-ELGIIGHVCH 303
+F ++G+G +S V L+ R+ A+K L ++ E ++ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 304 PNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLH 362
P L ++ LY ++++NG L + + S + + L YLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLH 149
Query: 363 KGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF 422
+ IIHRD+K N+LL D QITDFG AK L + A GT Y++PE
Sbjct: 150 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 423 MHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVL 459
+ +D++A G ++ +++ G P + + L+
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF 243
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 8/217 (3%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLM-ELGIIGHVCH 303
+F ++G+G +S V L+ R+ A+K L ++ E ++ + H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 304 PNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLH 362
P L ++ LY ++++NG L + + S + + L YLH
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLH 150
Query: 363 KGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF 422
+ IIHRD+K N+LL D QITDFG AK L + A GT Y++PE
Sbjct: 151 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 207
Query: 423 MHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVL 459
+ +D++A G ++ +++ G P + + L+
Sbjct: 208 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF 244
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 10/218 (4%)
Query: 246 NNFHSENMVGQGGYSEVYKGN-LSDGRKIAVKRLXXXXXXXXXXXXFLM-ELGIIGHVCH 303
+F ++G+G +S V L+ R+ A+K L ++ E ++ + H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 304 PNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLH 362
P L ++ LY ++++NG L + + S + + L YLH
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLH 124
Query: 363 -KGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEY 421
KG IIHRD+K N+LL D QITDFG AK L + A GT Y++PE
Sbjct: 125 GKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 180
Query: 422 FMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVL 459
+ +D++A G ++ +++ G P + + L+
Sbjct: 181 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF 218
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 8/217 (3%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLM-ELGIIGHVCH 303
+F ++G+G +S V L+ R+ A+K L ++ E ++ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 304 PNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLH 362
P L ++ LY ++++NG L + + S + + L YLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLH 149
Query: 363 KGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF 422
+ IIHRD+K N+LL D QITDFG AK L + A GT Y++PE
Sbjct: 150 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 423 MHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVL 459
+ +D++A G ++ +++ G P + + L+
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF 243
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 10/218 (4%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLM-ELGIIGHVCH 303
+F ++G+G +S V L+ R+ A+K L ++ E ++ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 304 PNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLH 362
P L ++ LY ++++NG L + + S + + L YLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLH 149
Query: 363 -KGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEY 421
KG IIHRD+K N+LL D QITDFG AK L + A GT Y++PE
Sbjct: 150 GKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 422 FMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVL 459
+ +D++A G ++ +++ G P + + L+
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF 243
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 10/218 (4%)
Query: 246 NNFHSENMVGQGGYSE-VYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLM-ELGIIGHVCH 303
+F ++G+G +S V L+ R+ A+K L ++ E ++ + H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 304 PNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLH 362
P L ++ LY ++++NG L + + S + + L YLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLH 147
Query: 363 -KGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEY 421
KG IIHRD+K N+LL D QITDFG AK L + A GT Y++PE
Sbjct: 148 GKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 422 FMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVL 459
+ +D++A G ++ +++ G P + + L+
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF 241
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 10/217 (4%)
Query: 247 NFHSENMVGQGGYSEVYKGN-LSDGRKIAVKRLXXXXXXXXXXXXFLM-ELGIIGHVCHP 304
+F ++G+G +S V L+ R+ A+K L ++ E ++ + HP
Sbjct: 15 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 74
Query: 305 NTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLH- 362
L ++ LY ++++NG L + + S + + L YLH
Sbjct: 75 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHG 132
Query: 363 KGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF 422
KG IIHRD+K N+LL D QITDFG AK L + A GT Y++PE
Sbjct: 133 KG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 188
Query: 423 MHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVL 459
+ +D++A G ++ +++ G P + + L+
Sbjct: 189 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF 225
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 8/217 (3%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLM-ELGIIGHVCH 303
+F ++G+G +S V L+ R+ A+K L ++ E ++ + H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 304 PNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLH 362
P L ++ LY ++++NG L + + S + + L YLH
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLH 152
Query: 363 KGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF 422
+ IIHRD+K N+LL D QITDFG AK L + A GT Y++PE
Sbjct: 153 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 209
Query: 423 MHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVL 459
+ +D++A G ++ +++ G P + + L+
Sbjct: 210 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF 246
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 118/259 (45%), Gaps = 46/259 (17%)
Query: 213 SSPLRKRNGS------LSNKEKHQPLLTCFSYEEISSAT----NNFHSENMVGQGGYSEV 262
S+ L K+ GS +S+KE+ F +E++ + + + VG G Y V
Sbjct: 13 STSLYKKAGSAAAPFTMSHKER-----PTFYRQELNKTIWEVPERYQTLSPVGSGAYGSV 67
Query: 263 YKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLV-----GCCIE- 315
++ G KIAVK+L EL ++ H+ H N L+ +E
Sbjct: 68 CSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATSLEE 127
Query: 316 -NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRI 369
N +YL+ + +L+ L D+ + L + + RGL Y+H I
Sbjct: 128 FNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKYIHSA---DI 175
Query: 370 IHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGI-ID 428
IHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE ++ + +
Sbjct: 176 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA-----TRWYRAPEIMLNWMHYN 230
Query: 429 EKTDVFAFGVLLLEIITGR 447
D+++ G ++ E++TGR
Sbjct: 231 MTVDIWSVGCIMAELLTGR 249
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 10/217 (4%)
Query: 247 NFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLM-ELGIIGHVCHP 304
+F ++G+G +S V L+ R+ A+K L ++ E ++ + HP
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 305 NTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLH- 362
L ++ LY ++++NG L + + S + + L YLH
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHG 147
Query: 363 KGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF 422
KG IIHRD+K N+LL D QITDFG AK L + A GT Y++PE
Sbjct: 148 KG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 203
Query: 423 MHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVL 459
+ +D++A G ++ +++ G P + + L+
Sbjct: 204 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF 240
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 103/242 (42%), Gaps = 32/242 (13%)
Query: 247 NFHSENMVGQGGYSEV-YKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
N+ +G+G +++V ++ G+++AVK + E+ I+ + HPN
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 306 TATLVGCC-IENGLYLIFNFSQNGNL-DAALHDERSKSLEWPIRYKIVLGVARGLHYLHK 363
L E LYL+ ++ G + D + K E +++ ++ + H
Sbjct: 68 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCH---- 123
Query: 364 GCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLP--NKCTHHAAIPIEGTFGYLAPEY 421
++ I+HRD+KA N+LL D +I DFG + NK P Y APE
Sbjct: 124 --QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSP-----PYAAPEL 176
Query: 422 FMHGIID-EKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEG 480
F D + DV++ GV+L +++G P D NL EL + L G
Sbjct: 177 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ---------------NLKELRERVLRG 221
Query: 481 EY 482
+Y
Sbjct: 222 KY 223
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ A L D+ + L + + RGL Y
Sbjct: 86 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCAKLTDDHVQFL--------IYQILRGLKY 136
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE
Sbjct: 137 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA-----TRWYRAPE 188
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 101/231 (43%), Gaps = 45/231 (19%)
Query: 254 VGQGGYSEV-YKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G+GG+S V L DG A+KR+ ++ + + HPN LV
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFN--HPNILRLVAY 94
Query: 313 CI-ENGL----YLIFNFSQNGNL---DAALHDERSKSLEWPIRYKIVLGVARGLHYLHKG 364
C+ E G +L+ F + G L L D+ + E I + ++LG+ RGL +H
Sbjct: 95 CLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILW-LLLGICRGLEAIHA- 152
Query: 365 CKRRIIHRDIKASNVLLGPDFEPQITDFG-----------------LAKWLPNKCTHHAA 407
+ HRD+K +N+LLG + +P + D G L W +C
Sbjct: 153 --KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRC----- 205
Query: 408 IPIEGTFGYLAPEYF---MHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQ 455
T Y APE F H +IDE+TDV++ G +L ++ G P D Q
Sbjct: 206 -----TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQ 251
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 254 VGQGGYSEVYKGNL----SDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATL 309
+G+G + +V++G + +A+K FL E + HP+ L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK-FLQEALTMRQFDHPHIVKL 456
Query: 310 VGCCIENGLYLIFNFSQNGNLDAALHDER-SKSLEWPIRYKIVLGVARGLHYLHKGCKRR 368
+G EN +++I G L + L + S L I Y L A L YL +R
Sbjct: 457 IGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA--LAYLES---KR 511
Query: 369 IIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAA---IPIEGTFGYLAPEYFMHG 425
+HRDI A NVL+ + ++ DFGL++++ + + A+ +PI+ ++APE
Sbjct: 512 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK----WMAPESINFR 567
Query: 426 IIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVL 459
+DV+ FGV + EI+ G KP + N V+
Sbjct: 568 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 602
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 10/217 (4%)
Query: 247 NFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLM-ELGIIGHVCHP 304
+F ++G+G +S V L+ R+ A+K L ++ E ++ + HP
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 305 NTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLH- 362
L ++ LY ++++NG L + + S + + L YLH
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHG 147
Query: 363 KGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF 422
KG IIHRD+K N+LL D QITDFG AK L + A GT Y++PE
Sbjct: 148 KG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 203
Query: 423 MHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVL 459
+ +D++A G ++ +++ G P + + L+
Sbjct: 204 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF 240
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 21/203 (10%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 313 CIE-------NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGC 365
N +YL+ + +L+ + + K + +++ ++ + RGL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHL-MGADLNNIV--KXQKLTDDHVQF-LIYQILRGLKYIHSA- 144
Query: 366 KRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHG 425
IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE ++
Sbjct: 145 --DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVA-----TRWYRAPEIMLNW 197
Query: 426 I-IDEKTDVFAFGVLLLEIITGR 447
+ ++ D+++ G ++ E++TGR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 254 VGQGGYSEVYKGNL----SDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATL 309
+G+G + +V++G + +A+K FL E + HP+ L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK-FLQEALTMRQFDHPHIVKL 76
Query: 310 VGCCIENGLYLIFNFSQNGNLDAALHDER-SKSLEWPIRYKIVLGVARGLHYLHKGCKRR 368
+G EN +++I G L + L + S L I Y L A L YL +R
Sbjct: 77 IGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA--LAYLES---KR 131
Query: 369 IIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAA---IPIEGTFGYLAPEYFMHG 425
+HRDI A NVL+ + ++ DFGL++++ + + A+ +PI+ ++APE
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK----WMAPESINFR 187
Query: 426 IIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVL 459
+DV+ FGV + EI+ G KP + N V+
Sbjct: 188 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 254 VGQGGYSEVYKGNL----SDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATL 309
+G+G + +V++G + +A+K FL E + HP+ L
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK-FLQEALTMRQFDHPHIVKL 78
Query: 310 VGCCIENGLYLIFNFSQNGNLDAALHDER-SKSLEWPIRYKIVLGVARGLHYLHKGCKRR 368
+G EN +++I G L + L + S L I Y L A L YL +R
Sbjct: 79 IGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA--LAYLES---KR 133
Query: 369 IIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAA---IPIEGTFGYLAPEYFMHG 425
+HRDI A NVL+ + ++ DFGL++++ + + A+ +PI+ ++APE
Sbjct: 134 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK----WMAPESINFR 189
Query: 426 IIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVL 459
+DV+ FGV + EI+ G KP + N V+
Sbjct: 190 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 224
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 254 VGQGGYSEVYKGNL----SDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATL 309
+G+G + +V++G + +A+K FL E + HP+ L
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK-FLQEALTMRQFDHPHIVKL 104
Query: 310 VGCCIENGLYLIFNFSQNGNLDAALHDER-SKSLEWPIRYKIVLGVARGLHYLHKGCKRR 368
+G EN +++I G L + L + S L I Y L A L YL +R
Sbjct: 105 IGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA--LAYLES---KR 159
Query: 369 IIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAA---IPIEGTFGYLAPEYFMHG 425
+HRDI A NVL+ + ++ DFGL++++ + + A+ +PI+ ++APE
Sbjct: 160 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK----WMAPESINFR 215
Query: 426 IIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVL 459
+DV+ FGV + EI+ G KP + N V+
Sbjct: 216 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 250
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 254 VGQGGYSEVYKGNL----SDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATL 309
+G+G + +V++G + +A+K FL E + HP+ L
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK-FLQEALTMRQFDHPHIVKL 79
Query: 310 VGCCIENGLYLIFNFSQNGNLDAALHDER-SKSLEWPIRYKIVLGVARGLHYLHKGCKRR 368
+G EN +++I G L + L + S L I Y L A L YL +R
Sbjct: 80 IGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA--LAYLES---KR 134
Query: 369 IIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAA---IPIEGTFGYLAPEYFMHG 425
+HRDI A NVL+ + ++ DFGL++++ + + A+ +PI+ ++APE
Sbjct: 135 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK----WMAPESINFR 190
Query: 426 IIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVL 459
+DV+ FGV + EI+ G KP + N V+
Sbjct: 191 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 225
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 254 VGQGGYSEVYKGNL----SDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATL 309
+G+G + +V++G + +A+K FL E + HP+ L
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK-FLQEALTMRQFDHPHIVKL 81
Query: 310 VGCCIENGLYLIFNFSQNGNLDAALHDER-SKSLEWPIRYKIVLGVARGLHYLHKGCKRR 368
+G EN +++I G L + L + S L I Y L A L YL +R
Sbjct: 82 IGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA--LAYLES---KR 136
Query: 369 IIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAA---IPIEGTFGYLAPEYFMHG 425
+HRDI A NVL+ + ++ DFGL++++ + + A+ +PI+ ++APE
Sbjct: 137 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK----WMAPESINFR 192
Query: 426 IIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVL 459
+DV+ FGV + EI+ G KP + N V+
Sbjct: 193 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 227
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 103/227 (45%), Gaps = 18/227 (7%)
Query: 246 NNFHSENMVGQGGYSEVY---KGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHV 301
++F ++GQG + +V+ K D G A+K L ME I+ V
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADV 87
Query: 302 CHPNTATL-VGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHY 360
HP L E LYLI +F + G+L L E + E +++ + +A GL +
Sbjct: 88 NHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFT-EEDVKFYLA-ELALGLDH 145
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHH-AAIPIEGTFGYLAP 419
LH II+RD+K N+LL + ++TDFGL+K H A GT Y+AP
Sbjct: 146 LHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK---EAIDHEKKAYSFCGTVEYMAP 199
Query: 420 EYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQ----NLVLWAK 462
E D +++GVL+ E++TG P + L+L AK
Sbjct: 200 EVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAK 246
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 142/318 (44%), Gaps = 59/318 (18%)
Query: 233 LTCFSYEEISSATNNFHSENMV-----GQGGYSEVYKGNLS--DGRK----IAVKRLXXX 281
L+ +++ + F +N+V G+G + +V K GR +AVK L
Sbjct: 5 LSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN 64
Query: 282 XXXXXXXXXFLMELGIIGHVCHPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDERS- 339
L E ++ V HP+ L G C ++G L LI +++ G+L L + R
Sbjct: 65 ASPSELRD-LLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKV 123
Query: 340 -------------KSLEWPIRYKIVLG--------VARGLHYLHKGCKRRIIHRDIKASN 378
SL+ P + +G +++G+ YL + ++HRD+ A N
Sbjct: 124 GPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARN 180
Query: 379 VLLGPDFEPQITDFGLAKWLPNKCTH----HAAIPIEGTFGYLAPEYFMHGIIDEKTDVF 434
+L+ + +I+DFGL++ + + + IP++ ++A E I ++DV+
Sbjct: 181 ILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVK----WMAIESLFDHIYTTQSDVW 236
Query: 435 AFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEGEYDTDQMHRLVLI 493
+FGVLL EI+T G P + L+++G+ E D +++M+RL+L
Sbjct: 237 SFGVLLWEIVTLGGNPYPGIPPERLF---NLLKTGHRMERPDNC------SEEMYRLML- 286
Query: 494 ADYCVRQTSAWRPSMSEV 511
C +Q RP +++
Sbjct: 287 --QCWKQEPDKRPVFADI 302
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 254 VGQGGYSEVYKGNL----SDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATL 309
+G+G + +V++G + +A+K FL E + HP+ L
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK-FLQEALTMRQFDHPHIVKL 73
Query: 310 VGCCIENGLYLIFNFSQNGNLDAALHDER-SKSLEWPIRYKIVLGVARGLHYLHKGCKRR 368
+G EN +++I G L + L + S L I Y L A L YL +R
Sbjct: 74 IGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA--LAYLES---KR 128
Query: 369 IIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAA---IPIEGTFGYLAPEYFMHG 425
+HRDI A NVL+ + ++ DFGL++++ + + A+ +PI+ ++APE
Sbjct: 129 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK----WMAPESINFR 184
Query: 426 IIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVL 459
+DV+ FGV + EI+ G KP + N V+
Sbjct: 185 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 219
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 21/223 (9%)
Query: 238 YEEISSATNNFHSENMVGQ-GGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELG 296
YE ++ N ++G+ G + +VYK + +A ++ +++E+
Sbjct: 1 YEHVTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELED-YMVEID 59
Query: 297 IIGHVCHPNTATLVGC-CIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVA 355
I+ HPN L+ EN L+++ F G +DA + + LE P+ + V
Sbjct: 60 ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE-----LERPLTESQIQVVC 114
Query: 356 R----GLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIE 411
+ L+YLH +IIHRD+KA N+L D + ++ DFG++ +
Sbjct: 115 KQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSA-KNTRTXIQRRDSFI 170
Query: 412 GTFGYLAPEYFMHGI-----IDEKTDVFAFGVLLLEIITGRKP 449
GT ++APE M D K DV++ G+ L+E+ P
Sbjct: 171 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 19/215 (8%)
Query: 254 VGQGGYSEVYKGNL----SDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATL 309
+G+G + +V++G + +A+K FL E + HP+ L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK-FLQEALTMRQFDHPHIVKL 456
Query: 310 VGCCIENGLYLIFNFSQNGNLDAALHDER-SKSLEWPIRYKIVLGVARGLHYLHKGCKRR 368
+G EN +++I G L + L + S L I Y L A L YL +R
Sbjct: 457 IGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA--LAYLES---KR 511
Query: 369 IIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAA---IPIEGTFGYLAPEYFMHG 425
+HRDI A NVL+ ++ DFGL++++ + + A+ +PI+ ++APE
Sbjct: 512 FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK----WMAPESINFR 567
Query: 426 IIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVL 459
+DV+ FGV + EI+ G KP + N V+
Sbjct: 568 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 602
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 21/203 (10%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 313 CIE-------NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGC 365
N +YL+ + +L+ + + K + +++ ++ + RGL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHL-MGADLNNIV--KXQKLTDDHVQF-LIYQILRGLKYIHSA- 144
Query: 366 KRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHG 425
IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE ++
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA-----TRWYRAPEIMLNW 197
Query: 426 I-IDEKTDVFAFGVLLLEIITGR 447
+ ++ D+++ G ++ E++TGR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 21/203 (10%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 313 CIE-------NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGC 365
N +YL+ + +L+ + + + L ++ + RGL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHL-MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 366 KRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHG 425
IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE ++
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA-----TRWYRAPEIMLNA 197
Query: 426 I-IDEKTDVFAFGVLLLEIITGR 447
+ ++ D+++ G ++ E++TGR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 254 VGQGGYSEVYKGNL----SDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATL 309
+G+G + +V++G + +A+K FL E + HP+ L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK-FLQEALTMRQFDHPHIVKL 76
Query: 310 VGCCIENGLYLIFNFSQNGNLDAALHDER-SKSLEWPIRYKIVLGVARGLHYLHKGCKRR 368
+G EN +++I G L + L + S L I Y L A L YL +R
Sbjct: 77 IGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA--LAYLES---KR 131
Query: 369 IIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAA---IPIEGTFGYLAPEYFMHG 425
+HRDI A NVL+ + ++ DFGL++++ + + A+ +PI+ ++APE
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK----WMAPESINFR 187
Query: 426 IIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVL 459
+DV+ FGV + EI+ G KP + N V+
Sbjct: 188 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 19/215 (8%)
Query: 254 VGQGGYSEVYKGNL----SDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATL 309
+G+G + +V++G + +A+K FL E + HP+ L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK-FLQEALTMRQFDHPHIVKL 76
Query: 310 VGCCIENGLYLIFNFSQNGNLDAALHDER-SKSLEWPIRYKIVLGVARGLHYLHKGCKRR 368
+G EN +++I G L + L + S L I Y L A L YL +R
Sbjct: 77 IGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA--LAYLES---KR 131
Query: 369 IIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAA---IPIEGTFGYLAPEYFMHG 425
+HRDI A NVL+ + ++ DFGL++++ + A+ +PI+ ++APE
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIK----WMAPESINFR 187
Query: 426 IIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVL 459
+DV+ FGV + EI+ G KP + N V+
Sbjct: 188 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 19/215 (8%)
Query: 254 VGQGGYSEVYKGNL----SDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATL 309
+G+G + +V++G + +A+K FL E + HP+ L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK-FLQEALTMRQFDHPHIVKL 76
Query: 310 VGCCIENGLYLIFNFSQNGNLDAALHDER-SKSLEWPIRYKIVLGVARGLHYLHKGCKRR 368
+G EN +++I G L + L + S L I Y L A L YL +R
Sbjct: 77 IGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA--LAYLES---KR 131
Query: 369 IIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAA---IPIEGTFGYLAPEYFMHG 425
+HRDI A NVL+ ++ DFGL++++ + + A+ +PI+ ++APE
Sbjct: 132 FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK----WMAPESINFR 187
Query: 426 IIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVL 459
+DV+ FGV + EI+ G KP + N V+
Sbjct: 188 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 90 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 140
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA-----TRWYRAPE 192
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 16/196 (8%)
Query: 294 ELGIIGHVCHPNTATLVGCCIE---NGLYLIFNFSQNGNLDAALHDERSK-SLEWPIRYK 349
E+ I+ ++ H N G C E NG+ LI F +G+L L ++K +L+ ++Y
Sbjct: 73 EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYA 132
Query: 350 IVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL-PNKCTHHAAI 408
+ + +G+ YL R+ +HRD+ A NVL+ + + +I DFGL K + +K
Sbjct: 133 V--QICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKD 187
Query: 409 PIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAK---PLM 465
+ + APE M +DV++FGV L E++T DS + L+ K P
Sbjct: 188 DRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTY---CDSDSSPMALFLKMIGPTH 244
Query: 466 ESGNLTELVDPSLEGE 481
+T LV+ EG+
Sbjct: 245 GQMTVTRLVNTLKEGK 260
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 123/283 (43%), Gaps = 42/283 (14%)
Query: 254 VGQGGYSEVYKGNLSD------GRKIAVKRLXXXXXXXXXXXXFLMELGII-GHVCHPNT 306
+GQG + VY+GN D ++AVK + FL E ++ G CH +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCH-HV 82
Query: 307 ATLVGCCIENGLYLI-FNFSQNGNLDAALHDERSKSLEWPIR--------YKIVLGVARG 357
L+G + L+ +G+L + L R ++ P R ++ +A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAA----IPIEGT 413
+ YL+ ++ +HRD+ A N ++ DF +I DFG+ + + + +P+
Sbjct: 143 MAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVR-- 197
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNLTE 472
++APE G+ +D+++FGV+L EI + +P VL K +M+ G L +
Sbjct: 198 --WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL--KFVMDGGYLDQ 253
Query: 473 LVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELL 515
P E TD M C + RP+ E++ LL
Sbjct: 254 ---PDNCPERVTDLMR-------MCWQFNPKMRPTFLEIVNLL 286
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 97 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 147
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE
Sbjct: 148 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVA-----TRWYRAPE 199
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 95 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 145
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE
Sbjct: 146 IHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVA-----TRWYRAPE 197
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 100 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 150
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE
Sbjct: 151 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA-----TRWYRAPE 202
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 203 IMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 97 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 147
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE
Sbjct: 148 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVA-----TRWYRAPE 199
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 21/203 (10%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 313 CIE-------NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGC 365
N +YL+ + +L+ + + + L ++ + RGL Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHL-MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSA- 150
Query: 366 KRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHG 425
IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE ++
Sbjct: 151 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA-----TRWYRAPEIMLNW 203
Query: 426 I-IDEKTDVFAFGVLLLEIITGR 447
+ ++ D+++ G ++ E++TGR
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 125/293 (42%), Gaps = 46/293 (15%)
Query: 241 ISSATNNFHSENMVGQGGYSEVYK-GNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIG 299
+ S ++ +G G Y K SDG+ + K L + E+ ++
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 300 HVCHPNTATLVGCCIE---NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVAR 356
+ HPN I+ LY++ + + G+L A++ + +K ++ + + VL V
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDL-ASVITKGTKERQY-LDEEFVLRVMT 118
Query: 357 GLHYLHKGCKRR------IIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
L K C RR ++HRD+K +NV L ++ DFGLA+ L + + A
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFV- 177
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNL 470
GT Y++PE +EK+D+++ G LL E+ P + Q
Sbjct: 178 -GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK-------------- 222
Query: 471 TELVDPSLEGEYD------TDQMH----RLVLIADYCVRQTSAWRPSMSEVLE 513
EL EG++ +D+++ R++ + DY RPS+ E+LE
Sbjct: 223 -ELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDY-------HRPSVEEILE 267
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 102/235 (43%), Gaps = 34/235 (14%)
Query: 254 VGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G GG+ V + D G ++A+K+ + +E+ I+ + HPN +
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRER-WCLEIQIMKKLNHPNVVSARE- 80
Query: 313 CIENGL---------YLIFNFSQNGNLDAALHD-ERSKSL-EWPIRYKIVLGVARGLHYL 361
+ +GL L + + G+L L+ E L E PIR ++ ++ L YL
Sbjct: 81 -VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-TLLSDISSALRYL 138
Query: 362 HKGCKRRIIHRDIKASNVLLGPDFEPQ-----ITDFGLAKWLPNK--CTHHAAIPIEGTF 414
H+ RIIHRD+K N++L P PQ I D G AK L CT GT
Sbjct: 139 HEN---RIIHRDLKPENIVLQPG--PQRLIHKIIDLGYAKELDQGELCTEFV-----GTL 188
Query: 415 GYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGN 469
YLAPE D ++FG L E ITG +P + Q V W + E N
Sbjct: 189 QYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP-VQWHGKVREKSN 242
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 97 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 147
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE
Sbjct: 148 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVA-----TRWYRAPE 199
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 94/209 (44%), Gaps = 33/209 (15%)
Query: 254 VGQGGYSEV---YKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLV 310
VG G Y V Y L +K+AVK+L EL ++ H+ H N L+
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 311 -----GCCIEN--GLYLIFNFS----QNGNLDAALHDERSKSLEWPIRYKIVLGVARGLH 359
IE+ +YL+ N AL DE + L V + RGL
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFL--------VYQLLRGLK 145
Query: 360 YLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAP 419
Y+H IIHRD+K SNV + D E +I DFGLA+ + T + A T Y AP
Sbjct: 146 YIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVA-----TRWYRAP 197
Query: 420 EYFMHGI-IDEKTDVFAFGVLLLEIITGR 447
E ++ + ++ D+++ G ++ E++ G+
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 108/233 (46%), Gaps = 29/233 (12%)
Query: 237 SYEEISSATNNFHSE---------NMVGQGGYSEVYKGNLS-DGRK---IAVKRLXXXXX 283
+YE+ + A + F E ++G G + EV G L G++ +A+K L
Sbjct: 4 TYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYT 63
Query: 284 XXXXXXXFLMELGIIGHVCHPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSL 342
FL E I+G HPN L G ++ + ++ + +NG+LD L +
Sbjct: 64 EKQRRD-FLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFT 122
Query: 343 EWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNK- 401
+ ++ G++ G+ YL +HRD+ A N+L+ + +++DFGL++ L +
Sbjct: 123 VIQL-VGMLRGISAGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 178
Query: 402 ----CTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKP 449
T IPI T APE +DV+++G+++ E+++ G +P
Sbjct: 179 EAAYTTRGGKIPIRWT----APEAIAFRKFTSASDVWSYGIVMWEVVSYGERP 227
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 16/196 (8%)
Query: 294 ELGIIGHVCHPNTATLVGCCIE---NGLYLIFNFSQNGNLDAALHDERSK-SLEWPIRYK 349
E+ I+ ++ H N G C E NG+ LI F +G+L L ++K +L+ ++Y
Sbjct: 61 EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYA 120
Query: 350 IVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL-PNKCTHHAAI 408
+ + +G+ YL R+ +HRD+ A NVL+ + + +I DFGL K + +K
Sbjct: 121 V--QICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKD 175
Query: 409 PIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAK---PLM 465
+ + APE M +DV++FGV L E++T DS + L+ K P
Sbjct: 176 DRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTY---CDSDSSPMALFLKMIGPTH 232
Query: 466 ESGNLTELVDPSLEGE 481
+T LV+ EG+
Sbjct: 233 GQMTVTRLVNTLKEGK 248
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 101 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 151
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE
Sbjct: 152 IHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVA-----TRWYRAPE 203
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 204 IMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 102/235 (43%), Gaps = 34/235 (14%)
Query: 254 VGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G GG+ V + D G ++A+K+ + +E+ I+ + HPN +
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRER-WCLEIQIMKKLNHPNVVSARE- 79
Query: 313 CIENGL---------YLIFNFSQNGNLDAALHD-ERSKSL-EWPIRYKIVLGVARGLHYL 361
+ +GL L + + G+L L+ E L E PIR ++ ++ L YL
Sbjct: 80 -VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-TLLSDISSALRYL 137
Query: 362 HKGCKRRIIHRDIKASNVLLGPDFEPQ-----ITDFGLAKWLPNK--CTHHAAIPIEGTF 414
H+ RIIHRD+K N++L P PQ I D G AK L CT GT
Sbjct: 138 HEN---RIIHRDLKPENIVLQPG--PQRLIHKIIDLGYAKELDQGELCTEFV-----GTL 187
Query: 415 GYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGN 469
YLAPE D ++FG L E ITG +P + Q V W + E N
Sbjct: 188 QYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP-VQWHGKVREKSN 241
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 21/203 (10%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 313 CIE-------NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGC 365
N +YL+ + +L+ + + + L ++ + RGL Y+H
Sbjct: 110 FTPARSLEEFNDVYLVTHL-MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSA- 164
Query: 366 KRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHG 425
IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE ++
Sbjct: 165 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA-----TRWYRAPEIMLNW 217
Query: 426 I-IDEKTDVFAFGVLLLEIITGR 447
+ ++ D+++ G ++ E++TGR
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 90 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 140
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA-----TRWYRAPE 192
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 21/203 (10%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 313 CIE-------NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGC 365
N +YL+ + +L+ + + + L ++ + RGL Y+H
Sbjct: 109 FTPARSLEEFNDVYLVTHL-MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSA- 163
Query: 366 KRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHG 425
IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE ++
Sbjct: 164 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA-----TRWYRAPEIMLNW 216
Query: 426 I-IDEKTDVFAFGVLLLEIITGR 447
+ ++ D+++ G ++ E++TGR
Sbjct: 217 MHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 92/203 (45%), Gaps = 16/203 (7%)
Query: 253 MVGQGGYSEVYK-GNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVG 311
M+G+G + EV K + ++ AVK + L E+ ++ + HPN L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 312 CCIENGLYLIFNFSQNGNLDAALHDE--RSKSLEWPIRYKIVLGVARGLHYLHKGCKRRI 369
++ + I G L DE + K +I+ V G+ Y+HK I
Sbjct: 89 ILEDSSSFYIVGELYTG---GELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK---HNI 142
Query: 370 IHRDIKASNVLLG---PDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGI 426
+HRD+K N+LL D + +I DFGL+ I GT Y+APE + G
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI---GTAYYIAPE-VLRGT 198
Query: 427 IDEKTDVFAFGVLLLEIITGRKP 449
DEK DV++ GV+L +++G P
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPP 221
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 93/216 (43%), Gaps = 30/216 (13%)
Query: 247 NFHSENMVGQGGYSEVYKGNLS-DGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
+F ++G GG+ +V+K DG+ +KR+ E+ + + H N
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER------EVKALAKLDHVN 65
Query: 306 TATLVGC-----------------CIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRY 348
GC L++ F G L+ + R + L+ +
Sbjct: 66 IVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLAL 125
Query: 349 KIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAI 408
++ + +G+ Y+H +++I+RD+K SN+ L + +I DFGL L N +
Sbjct: 126 ELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRS- 181
Query: 409 PIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEII 444
+GT Y++PE ++ D++A G++L E++
Sbjct: 182 --KGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 90 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 140
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA-----TRWYRAPE 192
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 90 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 140
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA-----TRWYRAPE 192
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 97 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 147
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE
Sbjct: 148 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA-----TRWYRAPE 199
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 102 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 152
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE
Sbjct: 153 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA-----TRWYRAPE 204
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 96 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 146
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE
Sbjct: 147 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA-----TRWYRAPE 198
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 92 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 142
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE
Sbjct: 143 IHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVA-----TRWYRAPE 194
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 95 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 145
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE
Sbjct: 146 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA-----TRWYRAPE 197
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 89 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 139
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE
Sbjct: 140 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA-----TRWYRAPE 191
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 192 IMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 90 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 140
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA-----TRWYRAPE 192
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 90 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 140
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA-----TRWYRAPE 192
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 92 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 142
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE
Sbjct: 143 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA-----TRWYRAPE 194
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 253 MVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVG 311
++G+G Y VY G +LS+ +IA+K + E+ + H+ H N +G
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQP--LHEEIALHKHLKHKNIVQYLG 86
Query: 312 CCIENGLYLIF-NFSQNGNLDAALHDERS--KSLEWPIRYKIVLGVARGLHYLHKGCKRR 368
ENG IF G+L A L + K E I + + GL YLH +
Sbjct: 87 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGF-YTKQILEGLKYLHD---NQ 142
Query: 369 IIHRDIKASNVLLGP-DFEPQITDFGLAKWLP--NKCTHHAAIPIEGTFGYLAPEYFMHG 425
I+HRDIK NVL+ +I+DFG +K L N CT GT Y+APE G
Sbjct: 143 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTE----TFTGTLQYMAPEIIDKG 198
Query: 426 I--IDEKTDVFAFGVLLLEIITGRKP 449
+ D+++ G ++E+ TG+ P
Sbjct: 199 PRGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 102 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 152
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE
Sbjct: 153 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA-----TRWYRAPE 204
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 92/216 (42%), Gaps = 16/216 (7%)
Query: 241 ISSATNNFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMELGIIG 299
I N+F ++G+GG+ EVY +D G+ A+K L + I+
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 300 HVCHPNTATLVGCC-----IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGV 354
+ + C + L I + G+L L S E +R+ +
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS-EADMRF-YAAEI 301
Query: 355 ARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTF 414
GL ++H R +++RD+K +N+LL +I+D GLA K H + GT
Sbjct: 302 ILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTH 354
Query: 415 GYLAPEYFMHGI-IDEKTDVFAFGVLLLEIITGRKP 449
GY+APE G+ D D F+ G +L +++ G P
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 92/216 (42%), Gaps = 16/216 (7%)
Query: 241 ISSATNNFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMELGIIG 299
I N+F ++G+GG+ EVY +D G+ A+K L + I+
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 300 HVCHPNTATLVGCC-----IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGV 354
+ + C + L I + G+L L S E +R+ +
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS-EADMRF-YAAEI 301
Query: 355 ARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTF 414
GL ++H R +++RD+K +N+LL +I+D GLA K H + GT
Sbjct: 302 ILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTH 354
Query: 415 GYLAPEYFMHGI-IDEKTDVFAFGVLLLEIITGRKP 449
GY+APE G+ D D F+ G +L +++ G P
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 92/203 (45%), Gaps = 16/203 (7%)
Query: 253 MVGQGGYSEVYK-GNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVG 311
M+G+G + EV K + ++ AVK + L E+ ++ + HPN L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 312 CCIENGLYLIFNFSQNGNLDAALHDE--RSKSLEWPIRYKIVLGVARGLHYLHKGCKRRI 369
++ + I G L DE + K +I+ V G+ Y+HK I
Sbjct: 89 ILEDSSSFYIVGELYTG---GELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK---HNI 142
Query: 370 IHRDIKASNVLLG---PDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGI 426
+HRD+K N+LL D + +I DFGL+ I GT Y+APE + G
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI---GTAYYIAPE-VLRGT 198
Query: 427 IDEKTDVFAFGVLLLEIITGRKP 449
DEK DV++ GV+L +++G P
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPP 221
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 102 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 152
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE
Sbjct: 153 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA-----TRWYRAPE 204
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 101 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 151
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE
Sbjct: 152 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA-----TRWYRAPE 203
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 204 IMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 92/216 (42%), Gaps = 16/216 (7%)
Query: 241 ISSATNNFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMELGIIG 299
I N+F ++G+GG+ EVY +D G+ A+K L + I+
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 242
Query: 300 HVCHPNTATLVGCC-----IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGV 354
+ + C + L I + G+L L S E +R+ +
Sbjct: 243 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS-EADMRF-YAAEI 300
Query: 355 ARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTF 414
GL ++H R +++RD+K +N+LL +I+D GLA K H + GT
Sbjct: 301 ILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTH 353
Query: 415 GYLAPEYFMHGI-IDEKTDVFAFGVLLLEIITGRKP 449
GY+APE G+ D D F+ G +L +++ G P
Sbjct: 354 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 21/203 (10%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 313 CIE-------NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGC 365
N +YL+ + +L+ + +S+ L ++ + RGL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHL-MGADLNNIV---KSQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 366 KRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHG 425
IIHRD+K SN+ + D E +I DFGL + ++ T + A T Y APE ++
Sbjct: 145 --DIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVA-----TRWYRAPEIMLNW 197
Query: 426 I-IDEKTDVFAFGVLLLEIITGR 447
+ ++ D+++ G ++ E++TGR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 92 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 142
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE
Sbjct: 143 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA-----TRWYRAPE 194
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 92/216 (42%), Gaps = 16/216 (7%)
Query: 241 ISSATNNFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMELGIIG 299
I N+F ++G+GG+ EVY +D G+ A+K L + I+
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 300 HVCHPNTATLVGCC-----IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGV 354
+ + C + L I + G+L L S E +R+ +
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS-EADMRF-YAAEI 301
Query: 355 ARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTF 414
GL ++H R +++RD+K +N+LL +I+D GLA K H + GT
Sbjct: 302 ILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTH 354
Query: 415 GYLAPEYFMHGI-IDEKTDVFAFGVLLLEIITGRKP 449
GY+APE G+ D D F+ G +L +++ G P
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 96 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 146
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE
Sbjct: 147 IHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVA-----TRWYRAPE 198
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 86 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 136
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE
Sbjct: 137 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA-----TRWYRAPE 188
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 95 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 145
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE
Sbjct: 146 IHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVA-----TRWYRAPE 197
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 126/293 (43%), Gaps = 46/293 (15%)
Query: 241 ISSATNNFHSENMVGQGGYSEVYK-GNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIG 299
+ S ++ +G G Y K SDG+ + K L + E+ ++
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 300 HVCHPNTATLVGCCIE---NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVAR 356
+ HPN I+ LY++ + + G+L A++ + +K ++ + + VL V
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDL-ASVITKGTKERQY-LDEEFVLRVMT 118
Query: 357 GLHYLHKGCKRR------IIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
L K C RR ++HRD+K +NV L ++ DFGLA+ L N T A +
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-NHDTSFAKTFV 177
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNL 470
GT Y++PE +EK+D+++ G LL E+ P + Q
Sbjct: 178 -GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK-------------- 222
Query: 471 TELVDPSLEGEYD------TDQMH----RLVLIADYCVRQTSAWRPSMSEVLE 513
EL EG++ +D+++ R++ + DY RPS+ E+LE
Sbjct: 223 -ELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDY-------HRPSVEEILE 267
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 90 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 140
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA-----TRWYRAPE 192
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 21/203 (10%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 313 CIE-------NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGC 365
N +YL+ + +L+ + + + L ++ + RGL Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHL-MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSA- 150
Query: 366 KRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHG 425
IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE ++
Sbjct: 151 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA-----TRWYRAPEIMLNW 203
Query: 426 I-IDEKTDVFAFGVLLLEIITGR 447
+ ++ D+++ G ++ E++TGR
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 21/203 (10%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 313 CIE-------NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGC 365
N +YL+ + +L+ + + + L ++ + RGL Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHL-MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSA- 146
Query: 366 KRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHG 425
IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE ++
Sbjct: 147 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA-----TRWYRAPEIMLNW 199
Query: 426 I-IDEKTDVFAFGVLLLEIITGR 447
+ ++ D+++ G ++ E++TGR
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 113 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 163
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE
Sbjct: 164 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA-----TRWYRAPE 215
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 216 IMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 17/229 (7%)
Query: 242 SSATNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXX-XXXFLMELGIIG 299
S ++ + ++G GG SEV+ +L D R +AVK L F E
Sbjct: 8 SHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAA 67
Query: 300 HVCHPNTATLVGCCIENGL-----YLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGV 354
+ HP + Y++ + L +H E + + I +++
Sbjct: 68 ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI--EVIADA 125
Query: 355 ARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLP---NKCTHHAAIPIE 411
+ L++ H+ IIHRD+K +N+++ ++ DFG+A+ + N T AA+
Sbjct: 126 CQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV--I 180
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLW 460
GT YL+PE +D ++DV++ G +L E++TG P + V +
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAY 229
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 95 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 145
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE
Sbjct: 146 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA-----TRWYRAPE 197
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 21/203 (10%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 313 CIE-------NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGC 365
N +YL+ + +L+ + + + L ++ + RGL Y+H
Sbjct: 109 FTPARSLEEFNDVYLVTHL-MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSA- 163
Query: 366 KRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHG 425
IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE ++
Sbjct: 164 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA-----TRWYRAPEIMLNW 216
Query: 426 I-IDEKTDVFAFGVLLLEIITGR 447
+ ++ D+++ G ++ E++TGR
Sbjct: 217 MHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 110 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 160
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE
Sbjct: 161 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA-----TRWYRAPE 212
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 90 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 140
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA-----TRWYRAPE 192
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 87 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 137
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE
Sbjct: 138 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA-----TRWYRAPE 189
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 190 IMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 35/210 (16%)
Query: 254 VGQGGYSEV---YKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLV 310
VG G Y V Y L +K+AVK+L EL ++ H+ H N L+
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 311 -----GCCIEN--GLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGL 358
IE+ +YL+ +L+ AL DE + L V + RGL
Sbjct: 94 DVFTPATSIEDFSEVYLVTTL-MGADLNNIVKCQALSDEHVQFL--------VYQLLRGL 144
Query: 359 HYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLA 418
Y+H IIHRD+K SNV + D E +I DFGLA+ + T + A T Y A
Sbjct: 145 KYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVA-----TRWYRA 196
Query: 419 PEYFMHGI-IDEKTDVFAFGVLLLEIITGR 447
PE ++ + ++ D+++ G ++ E++ G+
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 35/210 (16%)
Query: 254 VGQGGYSEV---YKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLV 310
VG G Y V Y L +K+AVK+L EL ++ H+ H N L+
Sbjct: 28 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 311 -----GCCIEN--GLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGL 358
IE+ +YL+ +L+ AL DE + L V + RGL
Sbjct: 86 DVFTPATSIEDFSEVYLVTTL-MGADLNNIVKCQALSDEHVQFL--------VYQLLRGL 136
Query: 359 HYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLA 418
Y+H IIHRD+K SNV + D E +I DFGLA+ + T + A T Y A
Sbjct: 137 KYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVA-----TRWYRA 188
Query: 419 PEYFMHGI-IDEKTDVFAFGVLLLEIITGR 447
PE ++ + ++ D+++ G ++ E++ G+
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 17/207 (8%)
Query: 253 MVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXX-XXXFLMELGIIGHVCHPNTATLV 310
++G GG SEV+ +L D R +AVK L F E + HP +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 311 GCCIENGL-----YLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGC 365
Y++ + L +H E + + I +++ + L++ H+
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI--EVIADACQALNFSHQNG 136
Query: 366 KRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLP---NKCTHHAAIPIEGTFGYLAPEYF 422
IIHRD+K +N+++ ++ DFG+A+ + N T AA+ GT YL+PE
Sbjct: 137 ---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV--IGTAQYLSPEQA 191
Query: 423 MHGIIDEKTDVFAFGVLLLEIITGRKP 449
+D ++DV++ G +L E++TG P
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 31/216 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+GQG + EV+K + G+K+A+K++ L E+ I+ + H N L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 313 C---------IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHK 363
C + +YL+F+F ++ +L L + K I+ +++ + GL+Y+H+
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIK-RVMQMLLNGLYYIHR 143
Query: 364 GCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL-------PNKCTHHAAIPIEGTFGY 416
+I+HRD+KA+NVL+ D ++ DFGLA+ PN+ + T Y
Sbjct: 144 N---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-----TLWY 195
Query: 417 LAPEYFMHGIID--EKTDVFAFGVLLLEIITGRKPV 450
PE + G D D++ G ++ E+ T R P+
Sbjct: 196 RPPELLL-GERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 86 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 136
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE
Sbjct: 137 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA-----TRWYRAPE 188
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 123/283 (43%), Gaps = 42/283 (14%)
Query: 254 VGQGGYSEVYKGNLSD------GRKIAVKRLXXXXXXXXXXXXFLMELGII-GHVCHPNT 306
+GQG + VY+GN D ++AVK + FL E ++ G CH +
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCH-HV 79
Query: 307 ATLVGCCIENGLYLI-FNFSQNGNLDAALHDERSKSLEWPIR--------YKIVLGVARG 357
L+G + L+ +G+L + L R ++ P R ++ +A G
Sbjct: 80 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 139
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN----KCTHHAAIPIEGT 413
+ YL+ ++ +HRD+ A N ++ DF +I DFG+ + + + +P+
Sbjct: 140 MAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR-- 194
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNLTE 472
++APE G+ +D+++FGV+L EI + +P VL K +M+ G L +
Sbjct: 195 --WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL--KFVMDGGYLDQ 250
Query: 473 LVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELL 515
P E TD M C + RP+ E++ LL
Sbjct: 251 ---PDNCPERVTDLMR-------MCWQFNPKMRPTFLEIVNLL 283
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 88 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 138
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE
Sbjct: 139 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA-----TRWYRAPE 190
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 191 IMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 87 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 137
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DFGLA+ ++ T + A T Y APE
Sbjct: 138 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA-----TRWYRAPE 189
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 190 IMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 98/220 (44%), Gaps = 28/220 (12%)
Query: 246 NNFHSENMVGQGGYSEVYK------GNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIG 299
NN +G G + +V + G K+AVK L + EL I+
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA-LMSELKIMS 104
Query: 300 HVC-HPNTATLVGCCIENGLYLIFN-FSQNGNL--------DAALHDERSKSLEWPIRYK 349
H+ H N L+G C G L+ + G+L +A L E + LE
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLH 164
Query: 350 IVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTH----H 405
VA+G+ +L + IHRD+ A NVLL +I DFGLA+ + N + +
Sbjct: 165 FSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 221
Query: 406 AAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
A +P++ ++APE + ++DV+++G+LL EI +
Sbjct: 222 ARLPVK----WMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 123/283 (43%), Gaps = 42/283 (14%)
Query: 254 VGQGGYSEVYKGNLSD------GRKIAVKRLXXXXXXXXXXXXFLMELGII-GHVCHPNT 306
+GQG + VY+GN D ++AVK + FL E ++ G CH +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCH-HV 82
Query: 307 ATLVGCCIENGLYLI-FNFSQNGNLDAALHDERSKSLEWPIR--------YKIVLGVARG 357
L+G + L+ +G+L + L R ++ P R ++ +A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN----KCTHHAAIPIEGT 413
+ YL+ ++ +HRD+ A N ++ DF +I DFG+ + + + +P+
Sbjct: 143 MAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR-- 197
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNLTE 472
++APE G+ +D+++FGV+L EI + +P VL K +M+ G L +
Sbjct: 198 --WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL--KFVMDGGYLDQ 253
Query: 473 LVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELL 515
P E TD M C + RP+ E++ LL
Sbjct: 254 ---PDNCPERVTDLMR-------MCWQFNPKMRPTFLEIVNLL 286
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 80/174 (45%), Gaps = 18/174 (10%)
Query: 291 FLMELGIIGHVCHPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRYK 349
FL E+ ++ + HPN +G ++ L I + + G L + S+ W R
Sbjct: 54 FLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQ-YPWSQRVS 112
Query: 350 IVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAI- 408
+A G+ YLH IIHRD+ + N L+ + + DFGLA+ + ++ T +
Sbjct: 113 FAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLR 169
Query: 409 -----------PIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVD 451
+ G ++APE DEK DVF+FG++L EII GR D
Sbjct: 170 SLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNAD 222
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 123/283 (43%), Gaps = 42/283 (14%)
Query: 254 VGQGGYSEVYKGNLSD------GRKIAVKRLXXXXXXXXXXXXFLMELGII-GHVCHPNT 306
+GQG + VY+GN D ++AVK + FL E ++ G CH +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCH-HV 82
Query: 307 ATLVGCCIENGLYLI-FNFSQNGNLDAALHDERSKSLEWPIR--------YKIVLGVARG 357
L+G + L+ +G+L + L R ++ P R ++ +A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAA----IPIEGT 413
+ YL+ ++ +HRD+ A N ++ DF +I DFG+ + + + +P+
Sbjct: 143 MAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-- 197
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNLTE 472
++APE G+ +D+++FGV+L EI + +P VL K +M+ G L +
Sbjct: 198 --WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL--KFVMDGGYLDQ 253
Query: 473 LVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELL 515
P E TD M C + RP+ E++ LL
Sbjct: 254 ---PDNCPERVTDLMR-------MCWQFNPKMRPTFLEIVNLL 286
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 123/283 (43%), Gaps = 42/283 (14%)
Query: 254 VGQGGYSEVYKGNLSD------GRKIAVKRLXXXXXXXXXXXXFLMELGII-GHVCHPNT 306
+GQG + VY+GN D ++AVK + FL E ++ G CH +
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCH-HV 81
Query: 307 ATLVGCCIENGLYLI-FNFSQNGNLDAALHDERSKSLEWPIR--------YKIVLGVARG 357
L+G + L+ +G+L + L R ++ P R ++ +A G
Sbjct: 82 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAA----IPIEGT 413
+ YL+ ++ +HRD+ A N ++ DF +I DFG+ + + + +P+
Sbjct: 142 MAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-- 196
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNLTE 472
++APE G+ +D+++FGV+L EI + +P VL K +M+ G L +
Sbjct: 197 --WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL--KFVMDGGYLDQ 252
Query: 473 LVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELL 515
P E TD M C + RP+ E++ LL
Sbjct: 253 ---PDNCPERVTDLMR-------MCWQFNPKMRPTFLEIVNLL 285
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 102/224 (45%), Gaps = 11/224 (4%)
Query: 246 NNFHSENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
++F + +G G V K I ++L + EL ++ P
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 306 TATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKG 364
G +G + + G+LD L + +K + I K+ + V RGL YL +
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKE--AKRIPEEILGKVSIAVLRGLAYLRE- 132
Query: 365 CKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMH 424
K +I+HRD+K SN+L+ E ++ DFG++ L + + GT Y+APE
Sbjct: 133 -KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV----GTRSYMAPERLQG 187
Query: 425 GIIDEKTDVFAFGVLLLEIITGRKPV--DSSRQNLVLWAKPLME 466
++D+++ G+ L+E+ GR P+ +++ ++ +P+++
Sbjct: 188 THYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIFGRPVVD 231
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 98/220 (44%), Gaps = 28/220 (12%)
Query: 246 NNFHSENMVGQGGYSEVYK------GNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIG 299
NN +G G + +V + G K+AVK L + EL I+
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA-LMSELKIMS 96
Query: 300 HVC-HPNTATLVGCCIENGLYLIFN-FSQNGNL--------DAALHDERSKSLEWPIRYK 349
H+ H N L+G C G L+ + G+L +A L E + LE
Sbjct: 97 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLH 156
Query: 350 IVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTH----H 405
VA+G+ +L + IHRD+ A NVLL +I DFGLA+ + N + +
Sbjct: 157 FSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 213
Query: 406 AAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
A +P++ ++APE + ++DV+++G+LL EI +
Sbjct: 214 ARLPVK----WMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 10/200 (5%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + V G +AVK + F E + + HP G C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDE---FFQEAQTMMKLSHPKLVKFYGVC 72
Query: 314 I-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHR 372
E +Y++ + NG L L K LE ++ V G+ +L + IHR
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRS-HGKGLEPSQLLEMCYDVCEGMAFLES---HQFIHR 128
Query: 373 DIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTD 432
D+ A N L+ D +++DFG+ +++ + + +++ + + APE F + K+D
Sbjct: 129 DLAARNCLVDRDLCVKVSDFGMTRYVLDD-QYVSSVGTKFPVKWSAPEVFHYFKYSSKSD 187
Query: 433 VFAFGVLLLEIIT-GRKPVD 451
V+AFG+L+ E+ + G+ P D
Sbjct: 188 VWAFGILMWEVFSLGKMPYD 207
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 90 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 140
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I D+GLA+ ++ T + A T Y APE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVA-----TRWYRAPE 192
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 31/216 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+GQG + EV+K + G+K+A+K++ L E+ I+ + H N L+
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 313 C---------IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHK 363
C + +YL+F+F ++ +L L + K I+ +++ + GL+Y+H+
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIK-RVMQMLLNGLYYIHR 142
Query: 364 GCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL-------PNKCTHHAAIPIEGTFGY 416
+I+HRD+KA+NVL+ D ++ DFGLA+ PN+ + T Y
Sbjct: 143 N---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-----TLWY 194
Query: 417 LAPEYFMHGIID--EKTDVFAFGVLLLEIITGRKPV 450
PE + G D D++ G ++ E+ T R P+
Sbjct: 195 RPPELLL-GERDYGPPIDLWGAGCIMAEMWT-RSPI 228
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 123/283 (43%), Gaps = 42/283 (14%)
Query: 254 VGQGGYSEVYKGNLSD------GRKIAVKRLXXXXXXXXXXXXFLMELGII-GHVCHPNT 306
+GQG + VY+GN D ++AVK + FL E ++ G CH +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCH-HV 82
Query: 307 ATLVGCCIENGLYLI-FNFSQNGNLDAALHDERSKSLEWPIR--------YKIVLGVARG 357
L+G + L+ +G+L + L R ++ P R ++ +A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN----KCTHHAAIPIEGT 413
+ YL+ ++ +HRD+ A N ++ DF +I DFG+ + + + +P+
Sbjct: 143 MAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR-- 197
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNLTE 472
++APE G+ +D+++FGV+L EI + +P VL K +M+ G L +
Sbjct: 198 --WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL--KFVMDGGYLDQ 253
Query: 473 LVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELL 515
P E TD M C + RP+ E++ LL
Sbjct: 254 ---PDNCPERVTDLMR-------MCWQFNPNMRPTFLEIVNLL 286
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 11/154 (7%)
Query: 301 VCHPNTATLVGCCIE-NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLH 359
V HP + G + +++I ++ + G L + L +S+ P+ V L
Sbjct: 63 VTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLR--KSQRFPNPVAKFYAAEVCLALE 120
Query: 360 YLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAP 419
YLH + II+RD+K N+LL + +ITDFG AK++P+ + GT Y+AP
Sbjct: 121 YLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYXLCGTPDYIAP 172
Query: 420 EYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSS 453
E ++ D ++FG+L+ E++ G P S
Sbjct: 173 EVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDS 206
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 31/216 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+GQG + EV+K + G+K+A+K++ L E+ I+ + H N L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 313 C---------IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHK 363
C + +YL+F+F ++ +L L + K I+ +++ + GL+Y+H+
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIK-RVMQMLLNGLYYIHR 143
Query: 364 GCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL-------PNKCTHHAAIPIEGTFGY 416
+I+HRD+KA+NVL+ D ++ DFGLA+ PN+ + T Y
Sbjct: 144 N---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-----TLWY 195
Query: 417 LAPEYFMHGIID--EKTDVFAFGVLLLEIITGRKPV 450
PE + G D D++ G ++ E+ T R P+
Sbjct: 196 RPPELLL-GERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 106/237 (44%), Gaps = 22/237 (9%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G+G Y VYK + G+ +A+K++ + E+ I+ P+ G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQE----IIKEISIMQQCDSPHVVKYYGS 92
Query: 313 CIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
+N L+++ + G++ + R+K+L I+ +GL YLH R IH
Sbjct: 93 YFKNTDLWIVMEYCGAGSVSDIIR-LRNKTLTEDEIATILQSTLKGLEYLHF---MRKIH 148
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKT 431
RDIKA N+LL + ++ DFG+A L + + GT ++APE +
Sbjct: 149 RDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVI--GTPFWMAPEVIQEIGYNCVA 206
Query: 432 DVFAFGVLLLEIITGRKP---VDSSRQNLVL-------WAKPLMESGNLTELVDPSL 478
D+++ G+ +E+ G+ P + R ++ + KP + S N T+ V L
Sbjct: 207 DIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCL 263
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 253 MVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVG 311
++G+G Y VY G +LS+ +IA+K + E+ + H+ H N +G
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLH--EEIALHKHLKHKNIVQYLG 72
Query: 312 CCIENGLYLIF-NFSQNGNLDAALHDERS--KSLEWPIRYKIVLGVARGLHYLHKGCKRR 368
ENG IF G+L A L + K E I + + GL YLH +
Sbjct: 73 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGF-YTKQILEGLKYLHD---NQ 128
Query: 369 IIHRDIKASNVLLGP-DFEPQITDFGLAKWLP--NKCTHHAAIPIEGTFGYLAPEYFMHG 425
I+HRDIK NVL+ +I+DFG +K L N CT GT Y+APE G
Sbjct: 129 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTE----TFTGTLQYMAPEIIDKG 184
Query: 426 I--IDEKTDVFAFGVLLLEIITGRKP 449
+ D+++ G ++E+ TG+ P
Sbjct: 185 PRGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 17/218 (7%)
Query: 242 SSATNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXX-XXXFLMELGIIG 299
S ++ + ++G GG SEV+ +L D R +AVK L F E
Sbjct: 8 SHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAA 67
Query: 300 HVCHPNTATLVGCCIENGL-----YLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGV 354
+ HP + Y++ + L +H E + + I +++
Sbjct: 68 ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI--EVIADA 125
Query: 355 ARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLP---NKCTHHAAIPIE 411
+ L++ H+ IIHRD+K +N+L+ ++ DFG+A+ + N AA+
Sbjct: 126 CQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAV--I 180
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
GT YL+PE +D ++DV++ G +L E++TG P
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 31/216 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+GQG + EV+K + G+K+A+K++ L E+ I+ + H N L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 313 C---------IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHK 363
C + +YL+F+F ++ +L L + K I+ +++ + GL+Y+H+
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTLSEIK-RVMQMLLNGLYYIHR 143
Query: 364 GCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL-------PNKCTHHAAIPIEGTFGY 416
+I+HRD+KA+NVL+ D ++ DFGLA+ PN+ + T Y
Sbjct: 144 N---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-----TLWY 195
Query: 417 LAPEYFMHGIID--EKTDVFAFGVLLLEIITGRKPV 450
PE + G D D++ G ++ E+ T R P+
Sbjct: 196 RPPELLL-GERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 121/283 (42%), Gaps = 26/283 (9%)
Query: 241 ISSATNNFHSENMVGQGGYSEVYK-GNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIG 299
+ S ++ +G G Y K SDG+ + K L + E+ ++
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 300 HVCHPNTATLVGCCIE---NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVAR 356
+ HPN I+ LY++ + + G+L A++ + +K ++ + + VL V
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDL-ASVITKGTKERQY-LDEEFVLRVMT 118
Query: 357 GLHYLHKGCKRR------IIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
L K C RR ++HRD+K +NV L ++ DFGLA+ L + A
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD--EDFAKEF 176
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNL 470
GT Y++PE +EK+D+++ G LL E+ P + Q + + G
Sbjct: 177 VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGK---IREGKF 233
Query: 471 TELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLE 513
+ P + + + R++ + DY RPS+ E+LE
Sbjct: 234 RRI--PYRYSDELNEIITRMLNLKDY-------HRPSVEEILE 267
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 90 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 140
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DFGLA+ ++ T A T Y APE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVA-----TRWYRAPE 192
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 93/221 (42%), Gaps = 19/221 (8%)
Query: 241 ISSATNNFHSENMVGQGGYSEVYKGN--LSDGRKIAVKRLXXXXXXXXXXXXFLMELGII 298
+ A + +G+G Y +V+K + GR +A+KR+ + E+ ++
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 299 GHVC---HPNTATLVGCCI------ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYK 349
H+ HPN L C E L L+F + +L L +
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKD 124
Query: 350 IVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIP 409
++ + RGL +LH R++HRD+K N+L+ + ++ DFGLA+ A
Sbjct: 125 MMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTS 178
Query: 410 IEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPV 450
+ T Y APE + D+++ G + E+ RKP+
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 22/211 (10%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHP 304
+ S VG G Y V + G K+A+K+L EL ++ H+ H
Sbjct: 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHE 101
Query: 305 NTATLV-----GCCIEN--GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARG 357
N L+ + N YL+ F Q +L + E S E I+Y +V + +G
Sbjct: 102 NVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGMEFS---EEKIQY-LVYQMLKG 156
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYL 417
L Y+H ++HRD+K N+ + D E +I DFGLA+ + T + T Y
Sbjct: 157 LKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVV-----TRWYR 208
Query: 418 APEYFMHGI-IDEKTDVFAFGVLLLEIITGR 447
APE + + ++ D+++ G ++ E++TG+
Sbjct: 209 APEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 99/216 (45%), Gaps = 9/216 (4%)
Query: 246 NNFHSENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
++F + +G G V+K + + ++L + EL ++ P
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 306 TATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKG 364
G +G + + G+LD L +++ + I K+ + V +GL YL +
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLRE- 141
Query: 365 CKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMH 424
K +I+HRD+K SN+L+ E ++ DFG++ L + + GT Y++PE
Sbjct: 142 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV----GTRSYMSPERLQG 196
Query: 425 GIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLW 460
++D+++ G+ L+E+ GR P+ S ++ ++
Sbjct: 197 THYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIF 232
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 95/229 (41%), Gaps = 43/229 (18%)
Query: 247 NFHSENMVGQGGYSEVYKGNLS-DGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
+F ++G GG+ +V+K DG+ ++R+ E+ + + H N
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER------EVKALAKLDHVN 66
Query: 306 TATLVGCCI--------------------ENG----------LYLIFNFSQNGNLDAALH 335
GC EN L++ F G L+ +
Sbjct: 67 IVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIE 126
Query: 336 DERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLA 395
R + L+ + ++ + +G+ Y+H +++IHRD+K SN+ L + +I DFGL
Sbjct: 127 KRRGEKLDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDFGLV 183
Query: 396 KWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEII 444
L N + +GT Y++PE ++ D++A G++L E++
Sbjct: 184 TSLKNDGKRTRS---KGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 19/221 (8%)
Query: 241 ISSATNNFHSENMVGQGGYSEVYKGN--LSDGRKIAVKRLXXXXXXXXXXXXFLMELGII 298
+ A + +G+G Y +V+K + GR +A+KR+ + E+ ++
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 299 GHVC---HPNTATLVGCCI------ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYK 349
H+ HPN L C E L L+F + +L L +
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKD 124
Query: 350 IVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIP 409
++ + RGL +LH R++HRD+K N+L+ + ++ DFGLA+ + A
Sbjct: 125 MMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM---ALTS 178
Query: 410 IEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPV 450
+ T Y APE + D+++ G + E+ RKP+
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 21/203 (10%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 313 CIE-------NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGC 365
N +YL+ + +L+ + + + L ++ + RGL Y+H
Sbjct: 113 FTPARSLEEFNDVYLVTHL-MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSA- 167
Query: 366 KRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHG 425
IIHRD+K SN+ + D E +I DFGLA+ ++ + A T Y APE ++
Sbjct: 168 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVA-----TRWYRAPEIMLNW 220
Query: 426 I-IDEKTDVFAFGVLLLEIITGR 447
+ ++ D+++ G ++ E++TGR
Sbjct: 221 MHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 19/221 (8%)
Query: 241 ISSATNNFHSENMVGQGGYSEVYKGN--LSDGRKIAVKRLXXXXXXXXXXXXFLMELGII 298
+ A + +G+G Y +V+K + GR +A+KR+ + E+ ++
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 299 GHVC---HPNTATLVGCCI------ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYK 349
H+ HPN L C E L L+F + +L L +
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKD 124
Query: 350 IVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIP 409
++ + RGL +LH R++HRD+K N+L+ + ++ DFGLA+ + A
Sbjct: 125 MMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM---ALTS 178
Query: 410 IEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPV 450
+ T Y APE + D+++ G + E+ RKP+
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 15/165 (9%)
Query: 291 FLMELGIIGHVCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E ++ + +P ++G C L+ ++ G L+ L R + I ++
Sbjct: 75 LLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNII--EL 132
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN-----KCTHH 405
V V+ G+ YL + +HRD+ A NVLL +I+DFGL+K L K H
Sbjct: 133 VHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 189
Query: 406 AAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKP 449
P++ + APE + K+DV++FGVL+ E + G+KP
Sbjct: 190 GKWPVK----WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 15/165 (9%)
Query: 291 FLMELGIIGHVCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E ++ + +P ++G C L+ ++ G L+ L R + I ++
Sbjct: 75 LLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNII--EL 132
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN-----KCTHH 405
V V+ G+ YL + +HRD+ A NVLL +I+DFGL+K L K H
Sbjct: 133 VHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 189
Query: 406 AAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKP 449
P++ + APE + K+DV++FGVL+ E + G+KP
Sbjct: 190 GKWPVK----WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 90 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 140
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DFGLA+ ++ A T Y APE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVA-----TRWYRAPE 192
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 81/182 (44%), Gaps = 14/182 (7%)
Query: 270 GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCIENG---LYLIFNFSQ 326
G +AVK+L F E+ I+ + H N G C G L LI F
Sbjct: 42 GEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLP 99
Query: 327 NGNLDAAL--HDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPD 384
G+L L H ER ++ + + +G+ YL G KR IHRD+ N+L+ +
Sbjct: 100 YGSLREYLQKHKERIDHIKL---LQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENE 153
Query: 385 FEPQITDFGLAKWLP-NKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEI 443
+I DFGL K LP +K P E + APE +DV++FGV+L E+
Sbjct: 154 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
Query: 444 IT 445
T
Sbjct: 214 FT 215
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 15/165 (9%)
Query: 291 FLMELGIIGHVCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E ++ + +P ++G C L+ ++ G L+ L R + I ++
Sbjct: 59 LLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNII--EL 116
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL-----PNKCTHH 405
V V+ G+ YL + +HRD+ A NVLL +I+DFGL+K L K H
Sbjct: 117 VHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTH 173
Query: 406 AAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKP 449
P++ + APE + K+DV++FGVL+ E + G+KP
Sbjct: 174 GKWPVK----WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 15/165 (9%)
Query: 291 FLMELGIIGHVCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E ++ + +P ++G C L+ ++ G L+ L R + I ++
Sbjct: 55 LLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNII--EL 112
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN-----KCTHH 405
V V+ G+ YL + +HRD+ A NVLL +I+DFGL+K L K H
Sbjct: 113 VHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 169
Query: 406 AAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKP 449
P++ + APE + K+DV++FGVL+ E + G+KP
Sbjct: 170 GKWPVK----WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 90 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 140
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DF LA+ ++ T + A T Y APE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVA-----TRWYRAPE 192
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 15/165 (9%)
Query: 291 FLMELGIIGHVCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E ++ + +P ++G C L+ ++ G L+ L R + I ++
Sbjct: 417 LLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNII--EL 474
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN-----KCTHH 405
V V+ G+ YL + +HRD+ A NVLL +I+DFGL+K L K H
Sbjct: 475 VHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 531
Query: 406 AAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKP 449
P++ + APE + K+DV++FGVL+ E + G+KP
Sbjct: 532 GKWPVK----WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 15/165 (9%)
Query: 291 FLMELGIIGHVCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E ++ + +P ++G C L+ ++ G L+ L R + I ++
Sbjct: 65 LLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNII--EL 122
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN-----KCTHH 405
V V+ G+ YL + +HRD+ A NVLL +I+DFGL+K L K H
Sbjct: 123 VHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 179
Query: 406 AAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKP 449
P++ + APE + K+DV++FGVL+ E + G+KP
Sbjct: 180 GKWPVK----WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 15/165 (9%)
Query: 291 FLMELGIIGHVCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E ++ + +P ++G C L+ ++ G L+ L R + I ++
Sbjct: 73 LLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNII--EL 130
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN-----KCTHH 405
V V+ G+ YL + +HRD+ A NVLL +I+DFGL+K L K H
Sbjct: 131 VHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 187
Query: 406 AAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKP 449
P++ + APE + K+DV++FGVL+ E + G+KP
Sbjct: 188 GKWPVK----WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 90 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 140
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DFGLA+ ++ A T Y APE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVA-----TRWYRAPE 192
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 15/165 (9%)
Query: 291 FLMELGIIGHVCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E ++ + +P ++G C L+ ++ G L+ L R + I ++
Sbjct: 53 LLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNII--EL 110
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN-----KCTHH 405
V V+ G+ YL + +HRD+ A NVLL +I+DFGL+K L K H
Sbjct: 111 VHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 167
Query: 406 AAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKP 449
P++ + APE + K+DV++FGVL+ E + G+KP
Sbjct: 168 GKWPVK----WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 116/247 (46%), Gaps = 37/247 (14%)
Query: 239 EEISSATNNFHSENMVGQGGYSEVYKGNL------SDGRKIAVKRLXXXXXXXXXXXXFL 292
+EIS + F E +G+ + +VYKG+L + +A+K L F
Sbjct: 21 KEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREE-FR 77
Query: 293 MELGIIGHVCHPNTATLVGCCIENG-LYLIFNFSQNGNLDAAL------------HDERS 339
E + + HPN L+G ++ L +IF++ +G+L L D+R+
Sbjct: 78 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 137
Query: 340 --KSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKW 397
+LE P +V +A G+ YL ++H+D+ NVL+ +I+D GL +
Sbjct: 138 VKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFRE 194
Query: 398 LPN----KCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKP-VD 451
+ K ++ +PI ++APE M+G +D++++GV+L E+ + G +P
Sbjct: 195 VYAADYYKLLGNSLLPIR----WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCG 250
Query: 452 SSRQNLV 458
S Q++V
Sbjct: 251 YSNQDVV 257
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 15/165 (9%)
Query: 291 FLMELGIIGHVCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E ++ + +P ++G C L+ ++ G L+ L R + I ++
Sbjct: 418 LLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNII--EL 475
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN-----KCTHH 405
V V+ G+ YL + +HRD+ A NVLL +I+DFGL+K L K H
Sbjct: 476 VHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 532
Query: 406 AAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKP 449
P++ + APE + K+DV++FGVL+ E + G+KP
Sbjct: 533 GKWPVK----WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 94/206 (45%), Gaps = 9/206 (4%)
Query: 246 NNFHSENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
++F + +G G V+K + + ++L + EL ++ P
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 306 TATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKG 364
G +G + + G+LD L +++ + I K+ + V +GL YL +
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLRE- 184
Query: 365 CKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMH 424
K +I+HRD+K SN+L+ E ++ DFG++ L + + GT Y++PE
Sbjct: 185 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV----GTRSYMSPERLQG 239
Query: 425 GIIDEKTDVFAFGVLLLEIITGRKPV 450
++D+++ G+ L+E+ GR P+
Sbjct: 240 THYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 15/165 (9%)
Query: 291 FLMELGIIGHVCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E ++ + +P ++G C L+ ++ G L+ L R + I ++
Sbjct: 59 LLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNII--EL 116
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN-----KCTHH 405
V V+ G+ YL + +HRD+ A NVLL +I+DFGL+K L K H
Sbjct: 117 VHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 173
Query: 406 AAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKP 449
P++ + APE + K+DV++FGVL+ E + G+KP
Sbjct: 174 GKWPVK----WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 18/203 (8%)
Query: 254 VGQGGYSEVY--KGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVG 311
+G G Y EV + ++ + A+K + L E+ ++ + HPN L
Sbjct: 45 LGSGAYGEVLLCRDKVTHVER-AIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYD 103
Query: 312 CCIEN-GLYLIFNFSQNGNL-DAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRI 369
+ YL+ + G L D +H + ++ + K VL G+ YLHK I
Sbjct: 104 FFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLS---GVTYLHK---HNI 157
Query: 370 IHRDIKASNVLLG---PDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGI 426
+HRD+K N+LL D +I DFGL+ N+ + GT Y+APE +
Sbjct: 158 VHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERL---GTAYYIAPE-VLRKK 213
Query: 427 IDEKTDVFAFGVLLLEIITGRKP 449
DEK DV++ GV+L ++ G P
Sbjct: 214 YDEKCDVWSIGVILFILLAGYPP 236
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 112/268 (41%), Gaps = 24/268 (8%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCH-PNTATLVG 311
+G+G Y V K ++ G+ AVKR+ L +L I P T T G
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKR-LLXDLDISXRTVDCPFTVTFYG 100
Query: 312 CCIENGLYLIFNFSQNGNLDAALHD--ERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRI 369
G I + +LD ++ +++ I KI + + + L +LH K +
Sbjct: 101 ALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS--KLSV 158
Query: 370 IHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDE 429
IHRD+K SNVL+ + + DFG++ +L + G Y APE + +
Sbjct: 159 IHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDID---AGCKPYXAPERINPELNQK 215
Query: 430 ----KTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEGEYDTD 485
K+D+++ G+ +E+ R P DS W P + + E P L + +
Sbjct: 216 GYSVKSDIWSLGITXIELAILRFPYDS-------WGTPFQQLKQVVEEPSPQLPADKFSA 268
Query: 486 QMHRLVLIADYCVRQTSAWRPSMSEVLE 513
+ V C+++ S RP+ E+ +
Sbjct: 269 E---FVDFTSQCLKKNSKERPTYPELXQ 293
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 86/202 (42%), Gaps = 11/202 (5%)
Query: 248 FHSENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTA 307
+H +G+G Y VYK + G A+K++ + E+ I+ + H N
Sbjct: 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 308 TLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKR 367
L I L+ F L D LE +L + G+ Y H R
Sbjct: 64 KLYDV-IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD---R 119
Query: 368 RIIHRDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAPEYFMHG 425
R++HRD+K N+L+ + E +I DFGLA+ +P + H + T Y AP+ M
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV----TLWYRAPDVLMGS 175
Query: 426 IIDEKT-DVFAFGVLLLEIITG 446
T D+++ G + E++ G
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 86/202 (42%), Gaps = 11/202 (5%)
Query: 248 FHSENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTA 307
+H +G+G Y VYK + G A+K++ + E+ I+ + H N
Sbjct: 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 308 TLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKR 367
L I L+ F L D LE +L + G+ Y H R
Sbjct: 64 KLYDV-IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD---R 119
Query: 368 RIIHRDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAPEYFMHG 425
R++HRD+K N+L+ + E +I DFGLA+ +P + H + T Y AP+ M
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV----TLWYRAPDVLMGS 175
Query: 426 IIDEKT-DVFAFGVLLLEIITG 446
T D+++ G + E++ G
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 123/283 (43%), Gaps = 42/283 (14%)
Query: 254 VGQGGYSEVYKGNLSD------GRKIAVKRLXXXXXXXXXXXXFLMELGII-GHVCHPNT 306
+GQG + VY+GN D ++AVK + FL E ++ G CH +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCH-HV 82
Query: 307 ATLVGCCIENGLYLI-FNFSQNGNLDAALHDERSKSLEWPIR--------YKIVLGVARG 357
L+G + L+ +G+L + L R ++ P R ++ +A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAA----IPIEGT 413
+ YL+ ++ +HR++ A N ++ DF +I DFG+ + + + +P+
Sbjct: 143 MAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-- 197
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNLTE 472
++APE G+ +D+++FGV+L EI + +P VL K +M+ G L +
Sbjct: 198 --WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL--KFVMDGGYLDQ 253
Query: 473 LVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELL 515
P E TD M C + RP+ E++ LL
Sbjct: 254 ---PDNCPERVTDLMR-------MCWQFNPNMRPTFLEIVNLL 286
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 123/283 (43%), Gaps = 42/283 (14%)
Query: 254 VGQGGYSEVYKGNLSD------GRKIAVKRLXXXXXXXXXXXXFLMELGII-GHVCHPNT 306
+GQG + VY+GN D ++AVK + FL E ++ G CH +
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCH-HV 83
Query: 307 ATLVGCCIENGLYLI-FNFSQNGNLDAALHDERSKSLEWPIR--------YKIVLGVARG 357
L+G + L+ +G+L + L R ++ P R ++ +A G
Sbjct: 84 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 143
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAA----IPIEGT 413
+ YL+ ++ +HR++ A N ++ DF +I DFG+ + + + +P+
Sbjct: 144 MAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-- 198
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNLTE 472
++APE G+ +D+++FGV+L EI + +P VL K +M+ G L +
Sbjct: 199 --WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL--KFVMDGGYLDQ 254
Query: 473 LVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELL 515
P E TD M C + RP+ E++ LL
Sbjct: 255 ---PDNCPERVTDLMR-------MCWQFNPNMRPTFLEIVNLL 287
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 116/247 (46%), Gaps = 37/247 (14%)
Query: 239 EEISSATNNFHSENMVGQGGYSEVYKGNL------SDGRKIAVKRLXXXXXXXXXXXXFL 292
+EIS + F E +G+ + +VYKG+L + +A+K L F
Sbjct: 4 KEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREE-FR 60
Query: 293 MELGIIGHVCHPNTATLVGCCIENG-LYLIFNFSQNGNLDAAL------------HDERS 339
E + + HPN L+G ++ L +IF++ +G+L L D+R+
Sbjct: 61 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 120
Query: 340 --KSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKW 397
+LE P +V +A G+ YL ++H+D+ NVL+ +I+D GL +
Sbjct: 121 VKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFRE 177
Query: 398 LPN----KCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKP-VD 451
+ K ++ +PI ++APE M+G +D++++GV+L E+ + G +P
Sbjct: 178 VYAADYYKLLGNSLLPIR----WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCG 233
Query: 452 SSRQNLV 458
S Q++V
Sbjct: 234 YSNQDVV 240
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 93/203 (45%), Gaps = 21/203 (10%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 313 CIE-------NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGC 365
N +YL+ + +L+ + + + L ++ + RGL Y+H
Sbjct: 110 FTPARSLEEFNDVYLVTHL-MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSA- 164
Query: 366 KRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHG 425
IIHRD+K SN+ + D E +I DFGLA+ ++ A T Y APE ++
Sbjct: 165 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVA-----TRWYRAPEIMLNW 217
Query: 426 I-IDEKTDVFAFGVLLLEIITGR 447
+ ++ D+++ G ++ E++TGR
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 70/134 (52%), Gaps = 10/134 (7%)
Query: 319 YLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASN 378
Y++ + L +H E + + I +++ + L++ H+ IIHRD+K +N
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAI--EVIADACQALNFSHQNG---IIHRDVKPAN 146
Query: 379 VLLGPDFEPQITDFGLAKWLP---NKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFA 435
+++ ++ DFG+A+ + N T AA+ GT YL+PE +D ++DV++
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAV--IGTAQYLSPEQARGDSVDARSDVYS 204
Query: 436 FGVLLLEIITGRKP 449
G +L E++TG P
Sbjct: 205 LGCVLYEVLTGEPP 218
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 90 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 140
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I FGLA+ ++ T + A T Y APE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVA-----TRWYRAPE 192
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 86 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 136
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I DFGLA+ ++ A T Y APE
Sbjct: 137 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVA-----TRWYRAPE 188
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 70/134 (52%), Gaps = 10/134 (7%)
Query: 319 YLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASN 378
Y++ + L +H E + + I +++ + L++ H+ IIHRD+K +N
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAI--EVIADACQALNFSHQNG---IIHRDVKPAN 146
Query: 379 VLLGPDFEPQITDFGLAKWLP---NKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFA 435
+++ ++ DFG+A+ + N T AA+ GT YL+PE +D ++DV++
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAV--IGTAQYLSPEQARGDSVDARSDVYS 204
Query: 436 FGVLLLEIITGRKP 449
G +L E++TG P
Sbjct: 205 LGCVLYEVLTGEPP 218
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 94/206 (45%), Gaps = 9/206 (4%)
Query: 246 NNFHSENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
++F + +G G V+K + + ++L + EL ++ P
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 306 TATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKG 364
G +G + + G+LD L +++ + I K+ + V +GL YL +
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLRE- 149
Query: 365 CKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMH 424
K +I+HRD+K SN+L+ E ++ DFG++ L + + GT Y++PE
Sbjct: 150 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV----GTRSYMSPERLQG 204
Query: 425 GIIDEKTDVFAFGVLLLEIITGRKPV 450
++D+++ G+ L+E+ GR P+
Sbjct: 205 THYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 107/234 (45%), Gaps = 21/234 (8%)
Query: 228 KHQPLLTCFSYEEISSATNNFHSENMVGQGGYSEVYKGNLS-DGRKIAVKRLXXXXXXXX 286
K+ LL S++ + + +G G Y V G+++A+K++
Sbjct: 37 KNLALLKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVT 96
Query: 287 XXXXFLMELGIIGHVCHPNTATL---VGCCIENG----LYLIFNFSQNGNLDAALHDERS 339
L EL I+ H H N + + + G +Y++ + ++ +L +H +
Sbjct: 97 NAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQP 155
Query: 340 KSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLP 399
+LE +RY + + RGL Y+H ++IHRD+K SN+L+ + E +I DFG+A+ L
Sbjct: 156 LTLEH-VRY-FLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLC 210
Query: 400 NKCTHHAAIPIE--GTFGYLAPEYFMHGIIDEKT---DVFAFGVLLLEIITGRK 448
H E T Y APE + + E T D+++ G + E++ R+
Sbjct: 211 TSPAEHQYFMTEYVATRWYRAPELMLS--LHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 90 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 140
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I D GLA+ ++ T + A T Y APE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVA-----TRWYRAPE 192
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 94/206 (45%), Gaps = 9/206 (4%)
Query: 246 NNFHSENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
++F + +G G V+K + + ++L + EL ++ P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 306 TATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKG 364
G +G + + G+LD L +++ + I K+ + V +GL YL +
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLRE- 122
Query: 365 CKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMH 424
K +I+HRD+K SN+L+ E ++ DFG++ L + + GT Y++PE
Sbjct: 123 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV----GTRSYMSPERLQG 177
Query: 425 GIIDEKTDVFAFGVLLLEIITGRKPV 450
++D+++ G+ L+E+ GR P+
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 107/234 (45%), Gaps = 21/234 (8%)
Query: 228 KHQPLLTCFSYEEISSATNNFHSENMVGQGGYSEVYKGNLS-DGRKIAVKRLXXXXXXXX 286
K+ LL S++ + + +G G Y V G+++A+K++
Sbjct: 36 KNLALLKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVT 95
Query: 287 XXXXFLMELGIIGHVCHPNTATL---VGCCIENG----LYLIFNFSQNGNLDAALHDERS 339
L EL I+ H H N + + + G +Y++ + ++ +L +H +
Sbjct: 96 NAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQP 154
Query: 340 KSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLP 399
+LE +RY + + RGL Y+H ++IHRD+K SN+L+ + E +I DFG+A+ L
Sbjct: 155 LTLEH-VRY-FLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLC 209
Query: 400 NKCTHHAAIPIE--GTFGYLAPEYFMHGIIDEKT---DVFAFGVLLLEIITGRK 448
H E T Y APE + + E T D+++ G + E++ R+
Sbjct: 210 TSPAEHQYFMTEYVATRWYRAPELMLS--LHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 94/206 (45%), Gaps = 9/206 (4%)
Query: 246 NNFHSENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
++F + +G G V+K + + ++L + EL ++ P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 306 TATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKG 364
G +G + + G+LD L +++ + I K+ + V +GL YL +
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLRE- 122
Query: 365 CKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMH 424
K +I+HRD+K SN+L+ E ++ DFG++ L + + GT Y++PE
Sbjct: 123 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV----GTRSYMSPERLQG 177
Query: 425 GIIDEKTDVFAFGVLLLEIITGRKPV 450
++D+++ G+ L+E+ GR P+
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 94/206 (45%), Gaps = 9/206 (4%)
Query: 246 NNFHSENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
++F + +G G V+K + + ++L + EL ++ P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 306 TATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKG 364
G +G + + G+LD L +++ + I K+ + V +GL YL +
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLRE- 122
Query: 365 CKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMH 424
K +I+HRD+K SN+L+ E ++ DFG++ L + + GT Y++PE
Sbjct: 123 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV----GTRSYMSPERLQG 177
Query: 425 GIIDEKTDVFAFGVLLLEIITGRKPV 450
++D+++ G+ L+E+ GR P+
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 97/214 (45%), Gaps = 28/214 (13%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHP 304
+ S VG G Y V + G K+A+K+L EL ++ H+ H
Sbjct: 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHE 83
Query: 305 NTATLV-----GCCIEN--GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARG 357
N L+ + N YL+ F Q +L + + S E I+Y +V + +G
Sbjct: 84 NVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGLKFS---EEKIQY-LVYQMLKG 138
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEG---TF 414
L Y+H ++HRD+K N+ + D E +I DFGLA+ HA + G T
Sbjct: 139 LKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR--------HADAEMTGYVVTR 187
Query: 415 GYLAPEYFMHGI-IDEKTDVFAFGVLLLEIITGR 447
Y APE + + ++ D+++ G ++ E++TG+
Sbjct: 188 WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 90 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 140
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I D GLA+ ++ T + A T Y APE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVA-----TRWYRAPE 192
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 86/202 (42%), Gaps = 11/202 (5%)
Query: 248 FHSENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTA 307
+H +G+G Y VYK + G A+K++ + E+ I+ + H N
Sbjct: 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 308 TLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKR 367
L I L+ F L D LE +L + G+ Y H R
Sbjct: 64 KLYDV-IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD---R 119
Query: 368 RIIHRDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAPEYFMHG 425
R++HRD+K N+L+ + E +I DFGLA+ +P + H + T Y AP+ M
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV----TLWYRAPDVLMGS 175
Query: 426 IIDEKT-DVFAFGVLLLEIITG 446
T D+++ G + E++ G
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 81/182 (44%), Gaps = 14/182 (7%)
Query: 270 GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCIENG---LYLIFNFSQ 326
G +AVK+L F E+ I+ + H N G C G L LI +
Sbjct: 42 GEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 99
Query: 327 NGNLDAAL--HDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPD 384
G+L L H ER ++ + + +G+ YL G KR IHRD+ N+L+ +
Sbjct: 100 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENE 153
Query: 385 FEPQITDFGLAKWLP-NKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEI 443
+I DFGL K LP +K P E + APE +DV++FGV+L E+
Sbjct: 154 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
Query: 444 IT 445
T
Sbjct: 214 FT 215
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 81/182 (44%), Gaps = 14/182 (7%)
Query: 270 GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCIENG---LYLIFNFSQ 326
G +AVK+L F E+ I+ + H N G C G L LI +
Sbjct: 70 GEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 127
Query: 327 NGNLDAAL--HDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPD 384
G+L L H ER ++ + + +G+ YL G KR IHRD+ N+L+ +
Sbjct: 128 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENE 181
Query: 385 FEPQITDFGLAKWLP-NKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEI 443
+I DFGL K LP +K P E + APE +DV++FGV+L E+
Sbjct: 182 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 241
Query: 444 IT 445
T
Sbjct: 242 FT 243
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 70/134 (52%), Gaps = 10/134 (7%)
Query: 319 YLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASN 378
Y++ + L +H E + + I +++ + L++ H+ IIHRD+K +N
Sbjct: 109 YIVMEYVDGVTLRDIVHTEGPMTPKRAI--EVIADACQALNFSHQNG---IIHRDVKPAN 163
Query: 379 VLLGPDFEPQITDFGLAKWLP---NKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFA 435
+++ ++ DFG+A+ + N T AA+ GT YL+PE +D ++DV++
Sbjct: 164 IMISATNAVKVMDFGIARAIADSGNSVTQTAAV--IGTAQYLSPEQARGDSVDARSDVYS 221
Query: 436 FGVLLLEIITGRKP 449
G +L E++TG P
Sbjct: 222 LGCVLYEVLTGEPP 235
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 81/182 (44%), Gaps = 14/182 (7%)
Query: 270 GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCIENG---LYLIFNFSQ 326
G +AVK+L F E+ I+ + H N G C G L LI +
Sbjct: 44 GEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 101
Query: 327 NGNLDAAL--HDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPD 384
G+L L H ER ++ + + +G+ YL G KR IHRD+ N+L+ +
Sbjct: 102 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENE 155
Query: 385 FEPQITDFGLAKWLP-NKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEI 443
+I DFGL K LP +K P E + APE +DV++FGV+L E+
Sbjct: 156 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 215
Query: 444 IT 445
T
Sbjct: 216 FT 217
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 81/182 (44%), Gaps = 14/182 (7%)
Query: 270 GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCIENG---LYLIFNFSQ 326
G +AVK+L F E+ I+ + H N G C G L LI +
Sbjct: 46 GEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 103
Query: 327 NGNLDAAL--HDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPD 384
G+L L H ER ++ + + +G+ YL G KR IHRD+ N+L+ +
Sbjct: 104 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENE 157
Query: 385 FEPQITDFGLAKWLP-NKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEI 443
+I DFGL K LP +K P E + APE +DV++FGV+L E+
Sbjct: 158 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 217
Query: 444 IT 445
T
Sbjct: 218 FT 219
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 97/226 (42%), Gaps = 34/226 (15%)
Query: 246 NNFHSENMVGQGGYSEVYK------GNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIG 299
NN +G G + +V + G K+AVK L + EL I+
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA-LMSELKIMS 104
Query: 300 HVC-HPNTATLVGCCIENGLYLIFN-FSQNGNLDAALHDERSKSLEWPIR---------- 347
H+ H N L+G C G L+ + G+L L +R LE+
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLS 164
Query: 348 ----YKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCT 403
VA+G+ +L + IHRD+ A NVLL +I DFGLA+ + N
Sbjct: 165 SRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 221
Query: 404 H----HAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
+ +A +P++ ++APE + ++DV+++G+LL EI +
Sbjct: 222 YIVKGNARLPVK----WMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 94/206 (45%), Gaps = 9/206 (4%)
Query: 246 NNFHSENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
++F + +G G V+K + + ++L + EL ++ P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 306 TATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKG 364
G +G + + G+LD L +++ + I K+ + V +GL YL +
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLRE- 122
Query: 365 CKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMH 424
K +I+HRD+K SN+L+ E ++ DFG++ L + + GT Y++PE
Sbjct: 123 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV----GTRSYMSPERLQG 177
Query: 425 GIIDEKTDVFAFGVLLLEIITGRKPV 450
++D+++ G+ L+E+ GR P+
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 94/206 (45%), Gaps = 9/206 (4%)
Query: 246 NNFHSENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
++F + +G G V+K + + ++L + EL ++ P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 306 TATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKG 364
G +G + + G+LD L +++ + I K+ + V +GL YL +
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLRE- 122
Query: 365 CKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMH 424
K +I+HRD+K SN+L+ E ++ DFG++ L + + GT Y++PE
Sbjct: 123 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV----GTRSYMSPERLQG 177
Query: 425 GIIDEKTDVFAFGVLLLEIITGRKPV 450
++D+++ G+ L+E+ GR P+
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 81/182 (44%), Gaps = 14/182 (7%)
Query: 270 GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCIENG---LYLIFNFSQ 326
G +AVK+L F E+ I+ + H N G C G L LI +
Sbjct: 43 GEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 100
Query: 327 NGNLDAAL--HDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPD 384
G+L L H ER ++ + + +G+ YL G KR IHRD+ N+L+ +
Sbjct: 101 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENE 154
Query: 385 FEPQITDFGLAKWLP-NKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEI 443
+I DFGL K LP +K P E + APE +DV++FGV+L E+
Sbjct: 155 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 214
Query: 444 IT 445
T
Sbjct: 215 FT 216
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 31/208 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG G Y V + G ++AVK+L EL ++ H+ H N L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 313 CIE-------NGLYLIFNFSQNGNLD-----AALHDERSKSLEWPIRYKIVLGVARGLHY 360
N +YL+ + +L+ L D+ + L + + RGL Y
Sbjct: 90 FTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL--------IYQILRGLKY 140
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPE 420
+H IIHRD+K SN+ + D E +I D GLA+ ++ T + A T Y APE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVA-----TRWYRAPE 192
Query: 421 YFMHGI-IDEKTDVFAFGVLLLEIITGR 447
++ + ++ D+++ G ++ E++TGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 81/182 (44%), Gaps = 14/182 (7%)
Query: 270 GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCIENG---LYLIFNFSQ 326
G +AVK+L F E+ I+ + H N G C G L LI +
Sbjct: 45 GEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 102
Query: 327 NGNLDAAL--HDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPD 384
G+L L H ER ++ + + +G+ YL G KR IHRD+ N+L+ +
Sbjct: 103 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENE 156
Query: 385 FEPQITDFGLAKWLP-NKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEI 443
+I DFGL K LP +K P E + APE +DV++FGV+L E+
Sbjct: 157 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 216
Query: 444 IT 445
T
Sbjct: 217 FT 218
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 81/182 (44%), Gaps = 14/182 (7%)
Query: 270 GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCIENG---LYLIFNFSQ 326
G +AVK+L F E+ I+ + H N G C G L LI +
Sbjct: 39 GEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 96
Query: 327 NGNLDAAL--HDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPD 384
G+L L H ER ++ + + +G+ YL G KR IHRD+ N+L+ +
Sbjct: 97 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENE 150
Query: 385 FEPQITDFGLAKWLP-NKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEI 443
+I DFGL K LP +K P E + APE +DV++FGV+L E+
Sbjct: 151 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
Query: 444 IT 445
T
Sbjct: 211 FT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 81/182 (44%), Gaps = 14/182 (7%)
Query: 270 GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCIENG---LYLIFNFSQ 326
G +AVK+L F E+ I+ + H N G C G L LI +
Sbjct: 37 GEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 94
Query: 327 NGNLDAAL--HDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPD 384
G+L L H ER ++ + + +G+ YL G KR IHRD+ N+L+ +
Sbjct: 95 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENE 148
Query: 385 FEPQITDFGLAKWLP-NKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEI 443
+I DFGL K LP +K P E + APE +DV++FGV+L E+
Sbjct: 149 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 208
Query: 444 IT 445
T
Sbjct: 209 FT 210
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 94/222 (42%), Gaps = 16/222 (7%)
Query: 243 SATNNFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHV 301
+ + + +VG+G Y V K D GR +A+K+ + E+ ++ +
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL 81
Query: 302 CHPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHY 360
H N L+ C + YL+F F + LD + L++ + K + + G+ +
Sbjct: 82 RHENLVNLLEVCKKKKRWYLVFEFVDHTILDDL--ELFPNGLDYQVVQKYLFQIINGIGF 139
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL--PNKCTHHAAIPIEGTFGYLA 418
H IIHRDIK N+L+ ++ DFG A+ L P + T Y A
Sbjct: 140 CHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEV----ATRWYRA 192
Query: 419 PEYFMHGI-IDEKTDVFAFGVLLLEIITGRK--PVDSSRQNL 457
PE + + + DV+A G L+ E+ G P DS L
Sbjct: 193 PELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQL 234
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 81/182 (44%), Gaps = 14/182 (7%)
Query: 270 GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCIENG---LYLIFNFSQ 326
G +AVK+L F E+ I+ + H N G C G L LI +
Sbjct: 38 GEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 95
Query: 327 NGNLDAAL--HDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPD 384
G+L L H ER ++ + + +G+ YL G KR IHRD+ N+L+ +
Sbjct: 96 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENE 149
Query: 385 FEPQITDFGLAKWLP-NKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEI 443
+I DFGL K LP +K P E + APE +DV++FGV+L E+
Sbjct: 150 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 209
Query: 444 IT 445
T
Sbjct: 210 FT 211
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 19/172 (11%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIE--NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYK 349
++E ++ + P T + C + + LY + + G+L H ++ + P
Sbjct: 67 MVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDL--MYHIQQVGKFKEPQAVF 124
Query: 350 IVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIP 409
++ GL +LHK R II+RD+K NV+L + +I DFG+ C H
Sbjct: 125 YAAEISIGLFFLHK---RGIIYRDLKLDNVMLDSEGHIKIADFGM-------CKEHMMDG 174
Query: 410 IE-----GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQN 456
+ GT Y+APE + + D +A+GVLL E++ G+ P D ++
Sbjct: 175 VTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED 226
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 81/182 (44%), Gaps = 14/182 (7%)
Query: 270 GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCIENG---LYLIFNFSQ 326
G +AVK+L F E+ I+ + H N G C G L LI +
Sbjct: 39 GEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 96
Query: 327 NGNLDAAL--HDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPD 384
G+L L H ER ++ + + +G+ YL G KR IHRD+ N+L+ +
Sbjct: 97 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENE 150
Query: 385 FEPQITDFGLAKWLP-NKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEI 443
+I DFGL K LP +K P E + APE +DV++FGV+L E+
Sbjct: 151 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
Query: 444 IT 445
T
Sbjct: 211 FT 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 81/182 (44%), Gaps = 14/182 (7%)
Query: 270 GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCIENG---LYLIFNFSQ 326
G +AVK+L F E+ I+ + H N G C G L LI +
Sbjct: 57 GEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 114
Query: 327 NGNLDAAL--HDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPD 384
G+L L H ER ++ + + +G+ YL G KR IHRD+ N+L+ +
Sbjct: 115 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENE 168
Query: 385 FEPQITDFGLAKWLP-NKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEI 443
+I DFGL K LP +K P E + APE +DV++FGV+L E+
Sbjct: 169 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 228
Query: 444 IT 445
T
Sbjct: 229 FT 230
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 94/205 (45%), Gaps = 9/205 (4%)
Query: 246 NNFHSENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
++F + +G G V+K + + ++L + EL ++ P
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 306 TATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKG 364
G +G + + G+LD L +++ + I K+ + V +GL YL +
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLRE- 125
Query: 365 CKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMH 424
K +I+HRD+K SN+L+ E ++ DFG++ L ++ + GT Y++PE
Sbjct: 126 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFV----GTRSYMSPERLQG 180
Query: 425 GIIDEKTDVFAFGVLLLEIITGRKP 449
++D+++ G+ L+E+ GR P
Sbjct: 181 THYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 96/217 (44%), Gaps = 24/217 (11%)
Query: 243 SATNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHV 301
S+++ F +G G Y+ VYKG N + G +A+K + + E+ ++ +
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTA-IREISLMKEL 60
Query: 302 CHPNTATLVGCC-IENGLYLIFNFSQNG---NLDAALHDERSKSLEWPIRYKIVLGVARG 357
H N L EN L L+F F N +D+ + LE + + +G
Sbjct: 61 KHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQG 120
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEG----- 412
L + H+ +I+HRD+K N+L+ + ++ DFGLA+ IP+
Sbjct: 121 LAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAF--------GIPVNTFSSEV 169
Query: 413 -TFGYLAPEYFMHG-IIDEKTDVFAFGVLLLEIITGR 447
T Y AP+ M D+++ G +L E+ITG+
Sbjct: 170 VTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 63/134 (47%), Gaps = 7/134 (5%)
Query: 318 LYLIFNFSQNGNLDAALH--DERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIK 375
L L+ G++ ++ DE + + P + GL +LH+ R II+RD+K
Sbjct: 260 LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLK 316
Query: 376 ASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFA 435
NVLL D +I+D GLA L K GT G++APE + D D FA
Sbjct: 317 PENVLLDDDGNVRISDLGLAVEL--KAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFA 374
Query: 436 FGVLLLEIITGRKP 449
GV L E+I R P
Sbjct: 375 LGVTLYEMIAARGP 388
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 81/182 (44%), Gaps = 14/182 (7%)
Query: 270 GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCIENG---LYLIFNFSQ 326
G +AVK+L F E+ I+ + H N G C G L LI +
Sbjct: 42 GEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 99
Query: 327 NGNLDAAL--HDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPD 384
G+L L H ER ++ + + +G+ YL G KR IHRD+ N+L+ +
Sbjct: 100 YGSLRDYLQAHAERIDHIKL---LQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENE 153
Query: 385 FEPQITDFGLAKWLP-NKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEI 443
+I DFGL K LP +K P E + APE +DV++FGV+L E+
Sbjct: 154 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
Query: 444 IT 445
T
Sbjct: 214 FT 215
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 81/182 (44%), Gaps = 14/182 (7%)
Query: 270 GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCIENG---LYLIFNFSQ 326
G +AVK+L F E+ I+ + H N G C G L LI +
Sbjct: 57 GEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 114
Query: 327 NGNLDAAL--HDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPD 384
G+L L H ER ++ + + +G+ YL G KR IHRD+ N+L+ +
Sbjct: 115 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENE 168
Query: 385 FEPQITDFGLAKWLP-NKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEI 443
+I DFGL K LP +K P E + APE +DV++FGV+L E+
Sbjct: 169 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 228
Query: 444 IT 445
T
Sbjct: 229 FT 230
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 94/199 (47%), Gaps = 14/199 (7%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTAT-LVG 311
+GQG VY +++ G+++A++++ + E+ ++ +PN L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPNIVNYLDS 85
Query: 312 CCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
+ + L+++ + G+L + + ++ + + L +LH ++IH
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN---QVIH 139
Query: 372 RDIKASNVLLGPDFEPQITDFGL-AKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEK 430
RDIK+ N+LLG D ++TDFG A+ P + + GT ++APE K
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV---GTPYWMAPEVVTRKAYGPK 196
Query: 431 TDVFAFGVLLLEIITGRKP 449
D+++ G++ +E+I G P
Sbjct: 197 VDIWSLGIMAIEMIEGEPP 215
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 8/107 (7%)
Query: 347 RYKIVLGVARGLHYLHKGCK-------RRIIHRDIKASNVLLGPDFEPQITDFGLAKWLP 399
R++ L +R L Y + CK RR +HRD+ A N+L+ + +I DFGLAK LP
Sbjct: 106 RHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLP 165
Query: 400 -NKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
+K + P + + APE I ++DV++FGV+L E+ T
Sbjct: 166 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 79/164 (48%), Gaps = 10/164 (6%)
Query: 294 ELGIIGHVCHPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVL 352
E+ I H+ HPN L + +YLI ++ G L L ++S + + I+
Sbjct: 73 EIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL--QKSCTFDEQRTATIME 130
Query: 353 GVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEG 412
+A L Y H +++IHRDIK N+LLG E +I DFG + P+ G
Sbjct: 131 ELADALMYCHG---KKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMC----G 183
Query: 413 TFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQN 456
T YL PE + +EK D++ GVL E++ G P +S+ N
Sbjct: 184 TLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHN 227
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 63/134 (47%), Gaps = 7/134 (5%)
Query: 318 LYLIFNFSQNGNLDAALH--DERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIK 375
L L+ G++ ++ DE + + P + GL +LH+ R II+RD+K
Sbjct: 260 LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLK 316
Query: 376 ASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFA 435
NVLL D +I+D GLA L K GT G++APE + D D FA
Sbjct: 317 PENVLLDDDGNVRISDLGLAVEL--KAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFA 374
Query: 436 FGVLLLEIITGRKP 449
GV L E+I R P
Sbjct: 375 LGVTLYEMIAARGP 388
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 63/134 (47%), Gaps = 7/134 (5%)
Query: 318 LYLIFNFSQNGNLDAALH--DERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIK 375
L L+ G++ ++ DE + + P + GL +LH+ R II+RD+K
Sbjct: 260 LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLK 316
Query: 376 ASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFA 435
NVLL D +I+D GLA L K GT G++APE + D D FA
Sbjct: 317 PENVLLDDDGNVRISDLGLAVEL--KAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFA 374
Query: 436 FGVLLLEIITGRKP 449
GV L E+I R P
Sbjct: 375 LGVTLYEMIAARGP 388
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 63/134 (47%), Gaps = 7/134 (5%)
Query: 318 LYLIFNFSQNGNLDAALH--DERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIK 375
L L+ G++ ++ DE + + P + GL +LH+ R II+RD+K
Sbjct: 260 LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLK 316
Query: 376 ASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFA 435
NVLL D +I+D GLA L K GT G++APE + D D FA
Sbjct: 317 PENVLLDDDGNVRISDLGLAVEL--KAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFA 374
Query: 436 FGVLLLEIITGRKP 449
GV L E+I R P
Sbjct: 375 LGVTLYEMIAARGP 388
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 102/233 (43%), Gaps = 38/233 (16%)
Query: 240 EISSATNNFHSENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGI-- 297
E S +N ++G+G Y VYKG+L D R +AVK F+ E I
Sbjct: 7 EPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQN-----FINEKNIYR 60
Query: 298 IGHVCHPNTATLV---GCCIENG---LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV 351
+ + H N A + +G L+ + NG+L L S +W ++
Sbjct: 61 VPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS---DWVSSCRLA 117
Query: 352 LGVARGLHYLHKGCKR------RIIHRDIKASNVLLGPDFEPQITDFGLAKWLP-NKCTH 404
V RGL YLH R I HRD+ + NVL+ D I+DFGL+ L N+
Sbjct: 118 HSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVR 177
Query: 405 -----HAAIPIEGTFGYLAPEYFMHGIID--------EKTDVFAFGVLLLEII 444
+AAI GT Y+APE + G ++ ++ D++A G++ EI
Sbjct: 178 PGEEDNAAISEVGTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 8/107 (7%)
Query: 347 RYKIVLGVARGLHYLHKGCK-------RRIIHRDIKASNVLLGPDFEPQITDFGLAKWLP 399
R++ L +R L Y + CK RR +HRD+ A N+L+ + +I DFGLAK LP
Sbjct: 119 RHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLP 178
Query: 400 -NKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
+K + P + + APE I ++DV++FGV+L E+ T
Sbjct: 179 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 81/182 (44%), Gaps = 14/182 (7%)
Query: 270 GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCIENG---LYLIFNFSQ 326
G +AVK+L F E+ I+ + H N G C G L LI +
Sbjct: 39 GEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 96
Query: 327 NGNLDAAL--HDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPD 384
G+L L H ER ++ + + +G+ YL G KR IHRD+ N+L+ +
Sbjct: 97 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENE 150
Query: 385 FEPQITDFGLAKWLP-NKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEI 443
+I DFGL K LP +K P E + APE +DV++FGV+L E+
Sbjct: 151 NRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
Query: 444 IT 445
T
Sbjct: 211 FT 212
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 94/199 (47%), Gaps = 14/199 (7%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTAT-LVG 311
+GQG VY +++ G+++A++++ + E+ ++ +PN L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPNIVNYLDS 86
Query: 312 CCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
+ + L+++ + G+L + + ++ + + L +LH ++IH
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN---QVIH 140
Query: 372 RDIKASNVLLGPDFEPQITDFGL-AKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEK 430
RDIK+ N+LLG D ++TDFG A+ P + + GT ++APE K
Sbjct: 141 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV---GTPYWMAPEVVTRKAYGPK 197
Query: 431 TDVFAFGVLLLEIITGRKP 449
D+++ G++ +E+I G P
Sbjct: 198 VDIWSLGIMAIEMIEGEPP 216
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 94/199 (47%), Gaps = 14/199 (7%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTAT-LVG 311
+GQG VY +++ G+++A++++ + E+ ++ +PN L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPNIVNYLDS 85
Query: 312 CCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
+ + L+++ + G+L + + ++ + + L +LH ++IH
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN---QVIH 139
Query: 372 RDIKASNVLLGPDFEPQITDFGL-AKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEK 430
RDIK+ N+LLG D ++TDFG A+ P + + GT ++APE K
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV---GTPYWMAPEVVTRKAYGPK 196
Query: 431 TDVFAFGVLLLEIITGRKP 449
D+++ G++ +E+I G P
Sbjct: 197 VDIWSLGIMAIEMIEGEPP 215
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 82/182 (45%), Gaps = 14/182 (7%)
Query: 270 GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCIENG---LYLIFNFSQ 326
G +AVK+L F E+ I+ + H N G C G L LI +
Sbjct: 40 GEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 97
Query: 327 NGNLDAAL--HDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPD 384
G+L L H ER ++ + + +G+ YL G KR IHR++ N+L+ +
Sbjct: 98 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL--GTKR-YIHRNLATRNILVENE 151
Query: 385 FEPQITDFGLAKWLP-NKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEI 443
+I DFGL K LP +K + P E + APE +DV++FGV+L E+
Sbjct: 152 NRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 211
Query: 444 IT 445
T
Sbjct: 212 FT 213
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 8/107 (7%)
Query: 347 RYKIVLGVARGLHYLHKGCK-------RRIIHRDIKASNVLLGPDFEPQITDFGLAKWLP 399
R++ L +R L Y + CK RR +HRD+ A N+L+ + +I DFGLAK LP
Sbjct: 107 RHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLP 166
Query: 400 -NKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
+K + P + + APE I ++DV++FGV+L E+ T
Sbjct: 167 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 94/199 (47%), Gaps = 14/199 (7%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTAT-LVG 311
+GQG VY +++ G+++A++++ + E+ ++ +PN L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPNIVNYLDS 85
Query: 312 CCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
+ + L+++ + G+L + + ++ + + L +LH ++IH
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN---QVIH 139
Query: 372 RDIKASNVLLGPDFEPQITDFGL-AKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEK 430
RDIK+ N+LLG D ++TDFG A+ P + + GT ++APE K
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV---GTPYWMAPEVVTRKAYGPK 196
Query: 431 TDVFAFGVLLLEIITGRKP 449
D+++ G++ +E+I G P
Sbjct: 197 VDIWSLGIMAIEMIEGEPP 215
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 16/207 (7%)
Query: 253 MVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXX--XXXXFLMELGIIGHVCHPNTATLV 310
+G+GG+++ ++ + +D +++ ++ ME+ I + H +
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 311 GCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRY---KIVLGVARGLHYLHKGCK 366
G +N ++++ + +L LH R E RY +IVLG YLH+
Sbjct: 108 GFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYYLRQIVLGC----QYLHRN-- 160
Query: 367 RRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGI 426
R+IHRD+K N+ L D E +I DFGLA + + GT Y+APE
Sbjct: 161 -RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--LCGTPNYIAPEVLSKKG 217
Query: 427 IDEKTDVFAFGVLLLEIITGRKPVDSS 453
+ DV++ G ++ ++ G+ P ++S
Sbjct: 218 HSFEVDVWSIGCIMYTLLVGKPPFETS 244
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 34/225 (15%)
Query: 246 NNFHSENMVGQGGYSEVYK------GNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIG 299
NN +G G + +V + G K+AVK L + EL I+
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA-LMSELKIMS 104
Query: 300 HVC-HPNTATLVGCCIENGLYLIFN-FSQNGNLDAALHDERSKSLEWPIRYKIVLG---- 353
H+ H N L+G C G L+ + G+L L +S+ LE + I
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR-RKSRVLETDPAFAIANSTLST 163
Query: 354 ---------VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTH 404
VA+G+ +L + IHRD+ A NVLL +I DFGLA+ + N +
Sbjct: 164 RDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 220
Query: 405 ----HAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
+A +P++ ++APE + ++DV+++G+LL EI +
Sbjct: 221 IVKGNARLPVK----WMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 16/207 (7%)
Query: 253 MVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXX--XXXXFLMELGIIGHVCHPNTATLV 310
+G+GG+++ ++ + +D +++ ++ ME+ I + H +
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 311 GCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRY---KIVLGVARGLHYLHKGCK 366
G +N ++++ + +L LH R E RY +IVLG YLH+
Sbjct: 84 GFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYYLRQIVLGC----QYLHRN-- 136
Query: 367 RRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGI 426
R+IHRD+K N+ L D E +I DFGLA + + GT Y+APE
Sbjct: 137 -RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKG 193
Query: 427 IDEKTDVFAFGVLLLEIITGRKPVDSS 453
+ DV++ G ++ ++ G+ P ++S
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 34/225 (15%)
Query: 246 NNFHSENMVGQGGYSEVYK------GNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIG 299
NN +G G + +V + G K+AVK L + EL I+
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA-LMSELKIMS 104
Query: 300 HVC-HPNTATLVGCCIENGLYLIFN-FSQNGNLDAALHDERSKSLEWPIRYKIVLG---- 353
H+ H N L+G C G L+ + G+L L +S+ LE + I
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR-RKSRVLETDPAFAIANSTAST 163
Query: 354 ---------VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTH 404
VA+G+ +L + IHRD+ A NVLL +I DFGLA+ + N +
Sbjct: 164 RDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 220
Query: 405 ----HAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
+A +P++ ++APE + ++DV+++G+LL EI +
Sbjct: 221 IVKGNARLPVK----WMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 16/207 (7%)
Query: 253 MVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXX--XXXXFLMELGIIGHVCHPNTATLV 310
+G+GG+++ ++ + +D +++ ++ ME+ I + H +
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 311 GCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRY---KIVLGVARGLHYLHKGCK 366
G +N ++++ + +L LH R E RY +IVLG YLH+
Sbjct: 88 GFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYYLRQIVLGC----QYLHRN-- 140
Query: 367 RRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGI 426
R+IHRD+K N+ L D E +I DFGLA + + GT Y+APE
Sbjct: 141 -RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKG 197
Query: 427 IDEKTDVFAFGVLLLEIITGRKPVDSS 453
+ DV++ G ++ ++ G+ P ++S
Sbjct: 198 HSFEVDVWSIGCIMYTLLVGKPPFETS 224
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 16/207 (7%)
Query: 253 MVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXX--XXXXFLMELGIIGHVCHPNTATLV 310
+G+GG+++ ++ + +D +++ ++ ME+ I + H +
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 311 GCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRY---KIVLGVARGLHYLHKGCK 366
G +N ++++ + +L LH R E RY +IVLG YLH+
Sbjct: 106 GFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYYLRQIVLGC----QYLHRN-- 158
Query: 367 RRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGI 426
R+IHRD+K N+ L D E +I DFGLA + + GT Y+APE
Sbjct: 159 -RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--LCGTPNYIAPEVLSKKG 215
Query: 427 IDEKTDVFAFGVLLLEIITGRKPVDSS 453
+ DV++ G ++ ++ G+ P ++S
Sbjct: 216 HSFEVDVWSIGCIMYTLLVGKPPFETS 242
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 16/207 (7%)
Query: 253 MVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXX--XXXXFLMELGIIGHVCHPNTATLV 310
+G+GG+++ ++ + +D +++ ++ ME+ I + H +
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 311 GCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRY---KIVLGVARGLHYLHKGCK 366
G +N ++++ + +L LH R E RY +IVLG YLH+
Sbjct: 84 GFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYYLRQIVLGC----QYLHRN-- 136
Query: 367 RRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGI 426
R+IHRD+K N+ L D E +I DFGLA + + GT Y+APE
Sbjct: 137 -RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKG 193
Query: 427 IDEKTDVFAFGVLLLEIITGRKPVDSS 453
+ DV++ G ++ ++ G+ P ++S
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 16/207 (7%)
Query: 253 MVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXX--XXXXFLMELGIIGHVCHPNTATLV 310
+G+GG+++ ++ + +D +++ ++ ME+ I + H +
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 311 GCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRY---KIVLGVARGLHYLHKGCK 366
G +N ++++ + +L LH R E RY +IVLG YLH+
Sbjct: 82 GFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYYLRQIVLGC----QYLHRN-- 134
Query: 367 RRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGI 426
R+IHRD+K N+ L D E +I DFGLA + + GT Y+APE
Sbjct: 135 -RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC--GTPNYIAPEVLSKKG 191
Query: 427 IDEKTDVFAFGVLLLEIITGRKPVDSS 453
+ DV++ G ++ ++ G+ P ++S
Sbjct: 192 HSFEVDVWSIGCIMYTLLVGKPPFETS 218
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 15/202 (7%)
Query: 254 VGQGGYSEVYKGNLSD-GRKIAVKRLXXX-XXXXXXXXXFLMELGIIGHVCHPNTATLVG 311
+G GG S VY + K+A+K + F E+ + H N +++
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 312 CCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRII 370
E+ YL+ + + L + S++ I + + G+ + H RI+
Sbjct: 79 VDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINF--TNQILDGIKHAHD---MRIV 133
Query: 371 HRDIKASNVLLGPDFEPQITDFGLAKWLPNKC---THHAAIPIEGTFGYLAPEYFMHGII 427
HRDIK N+L+ + +I DFG+AK L T+H + GT Y +PE
Sbjct: 134 HRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNH----VLGTVQYFSPEQAKGEAT 189
Query: 428 DEKTDVFAFGVLLLEIITGRKP 449
DE TD+++ G++L E++ G P
Sbjct: 190 DECTDIYSIGIVLYEMLVGEPP 211
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 71/152 (46%), Gaps = 12/152 (7%)
Query: 303 HPNTATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYL 361
HP L C E+ L+ + + G+L + +R E Y + +A L+YL
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYL 137
Query: 362 HKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAK--WLPNKCTHHAAIPIEGTFGYLAP 419
H+ R II+RD+K NVLL + ++TD+G+ K P T GT Y+AP
Sbjct: 138 HE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC----GTPNYIAP 190
Query: 420 EYFMHGIIDEKTDVFAFGVLLLEIITGRKPVD 451
E D +A GVL+ E++ GR P D
Sbjct: 191 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 71/152 (46%), Gaps = 12/152 (7%)
Query: 303 HPNTATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYL 361
HP L C E+ L+ + + G+L + +R E Y + +A L+YL
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYL 169
Query: 362 HKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAK--WLPNKCTHHAAIPIEGTFGYLAP 419
H+ R II+RD+K NVLL + ++TD+G+ K P T GT Y+AP
Sbjct: 170 HE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFC----GTPNYIAP 222
Query: 420 EYFMHGIIDEKTDVFAFGVLLLEIITGRKPVD 451
E D +A GVL+ E++ GR P D
Sbjct: 223 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 115/265 (43%), Gaps = 29/265 (10%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXX-XXFLMELGIIGHVCHPNTATLVG 311
+G G + VY ++ + +A+K++ + E+ + + HPNT G
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 312 CCI-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRII 370
C + E+ +L+ + D L + K L+ + G +GL YLH +I
Sbjct: 122 CYLREHTAWLVMEYCLGSASD--LLEVHKKPLQEVEIAAVTHGALQGLAYLHS---HNMI 176
Query: 371 HRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFM---HGII 427
HRD+KA N+LL ++ DFG A + A GT ++APE + G
Sbjct: 177 HRDVKAGNILLSEPGLVKLGDFGSASIMA------PANXFVGTPYWMAPEVILAMDEGQY 230
Query: 428 DEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEGEYDTDQM 487
D K DV++ G+ +E+ + P+ + L+ ES P+L+ + ++
Sbjct: 231 DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES--------PALQSGHWSEYF 282
Query: 488 HRLVLIADYCVRQTSAWRPSMSEVL 512
V D C+++ RP+ SEVL
Sbjct: 283 RNFV---DSCLQKIPQDRPT-SEVL 303
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 57/107 (53%), Gaps = 8/107 (7%)
Query: 347 RYKIVLGVARGLHYLHKGCK-------RRIIHRDIKASNVLLGPDFEPQITDFGLAKWLP 399
R++ L +R L Y + CK RR +HRD+ A N+L+ + +I DFGLAK LP
Sbjct: 103 RHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLP 162
Query: 400 -NKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
+K P + + APE I ++DV++FGV+L E+ T
Sbjct: 163 LDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 91/218 (41%), Gaps = 13/218 (5%)
Query: 244 ATNNFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVC 302
+NF ++G+G + +V + + G AVK L M I +
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLA 80
Query: 303 --HPNTATLVGCCIE--NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGL 358
HP L CC + + L+ + F G+L H ++S+ + + L
Sbjct: 81 RNHPFLTQLF-CCFQTPDRLFFVMEFVNGGDL--MFHIQKSRRFDEARARFYAAEIISAL 137
Query: 359 HYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLA 418
+LH + II+RD+K NVLL + ++ DFG+ K C GT Y+A
Sbjct: 138 MFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGTPDYIA 192
Query: 419 PEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQN 456
PE + D +A GVLL E++ G P ++ ++
Sbjct: 193 PEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED 230
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 115/265 (43%), Gaps = 29/265 (10%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXX-XXXXXXXXXFLMELGIIGHVCHPNTATLVG 311
+G G + VY ++ + +A+K++ + E+ + + HPNT G
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 312 CCI-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRII 370
C + E+ +L+ + D L + K L+ + G +GL YLH +I
Sbjct: 83 CYLREHTAWLVMEYCLGSASD--LLEVHKKPLQEVEIAAVTHGALQGLAYLHS---HNMI 137
Query: 371 HRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFM---HGII 427
HRD+KA N+LL ++ DFG A + A GT ++APE + G
Sbjct: 138 HRDVKAGNILLSEPGLVKLGDFGSASIMA------PANXFVGTPYWMAPEVILAMDEGQY 191
Query: 428 DEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEGEYDTDQM 487
D K DV++ G+ +E+ + P+ + L+ ES P+L+ + ++
Sbjct: 192 DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES--------PALQSGHWSEYF 243
Query: 488 HRLVLIADYCVRQTSAWRPSMSEVL 512
V D C+++ RP+ SEVL
Sbjct: 244 RNFV---DSCLQKIPQDRPT-SEVL 264
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 107/241 (44%), Gaps = 26/241 (10%)
Query: 239 EEISSATNNFHSENMVGQGGYSEVYKGNL-SDGRKIAVKRLXXXXXXXXXXXXFLMELGI 297
+ + N+ + +G G +V+K G IAVK++ LM+L +
Sbjct: 18 QRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKR-ILMDLDV 76
Query: 298 I--GHVCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV---- 351
+ H C P G I N I L ++ K ++ PI +I+
Sbjct: 77 VLKSHDC-PYIVQCFGTFITNTDVFIAM-----ELMGTCAEKLKKRMQGPIPERILGKMT 130
Query: 352 LGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLA-KWLPNKCTHHAAIPI 410
+ + + L+YL + K +IHRD+K SN+LL + ++ DFG++ + + +K +A
Sbjct: 131 VAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA--- 185
Query: 411 EGTFGYLAPEYF-----MHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLM 465
G Y+APE D + DV++ G+ L+E+ TG+ P + + + + K L
Sbjct: 186 -GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQ 244
Query: 466 E 466
E
Sbjct: 245 E 245
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 71/152 (46%), Gaps = 12/152 (7%)
Query: 303 HPNTATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYL 361
HP L C E+ L+ + + G+L + +R E Y + +A L+YL
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYL 122
Query: 362 HKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAK--WLPNKCTHHAAIPIEGTFGYLAP 419
H+ R II+RD+K NVLL + ++TD+G+ K P T GT Y+AP
Sbjct: 123 HE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC----GTPNYIAP 175
Query: 420 EYFMHGIIDEKTDVFAFGVLLLEIITGRKPVD 451
E D +A GVL+ E++ GR P D
Sbjct: 176 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 71/152 (46%), Gaps = 12/152 (7%)
Query: 303 HPNTATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYL 361
HP L C E+ L+ + + G+L + +R E Y + +A L+YL
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYL 126
Query: 362 HKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAK--WLPNKCTHHAAIPIEGTFGYLAP 419
H+ R II+RD+K NVLL + ++TD+G+ K P T GT Y+AP
Sbjct: 127 HE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC----GTPNYIAP 179
Query: 420 EYFMHGIIDEKTDVFAFGVLLLEIITGRKPVD 451
E D +A GVL+ E++ GR P D
Sbjct: 180 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 105/216 (48%), Gaps = 23/216 (10%)
Query: 240 EISSATNNFHSENMVGQGGYSEVYKGNLSDGRKI-AVKRLXX---XXXXXXXXXXFLMEL 295
++ S + + +G+G ++ VYK + +I A+K++ L E+
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 296 GIIGHVCHPNTATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGV 354
++ + HPN L+ ++ + L+F+F + +L+ + D I+ +++ +
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTL 122
Query: 355 ARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL--PNKCTHHAAIPIEG 412
+GL YLH+ I+HRD+K +N+LL + ++ DFGLAK PN+ H +
Sbjct: 123 -QGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV---- 174
Query: 413 TFGYLAPEYF----MHGIIDEKTDVFAFGVLLLEII 444
T Y APE M+G+ D++A G +L E++
Sbjct: 175 TRWYRAPELLFGARMYGV---GVDMWAVGCILAELL 207
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 89/217 (41%), Gaps = 18/217 (8%)
Query: 244 ATNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVC 302
AT+ + +G G Y VYK + G +A+K + + E+ ++ +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 303 ---HPNTATLVGCCI------ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLG 353
HPN L+ C E + L+F + +L L L ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGT 413
RGL +LH C I+HRD+K N+L+ ++ DFGLA+ A P+ T
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALFPVVVT 174
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPV 450
Y APE + D+++ G + E+ RKP+
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 94/199 (47%), Gaps = 14/199 (7%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTAT-LVG 311
+GQG VY +++ G+++A++++ + E+ ++ +PN L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPNIVNYLDS 86
Query: 312 CCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
+ + L+++ + G+L + + ++ + + L +LH ++IH
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN---QVIH 140
Query: 372 RDIKASNVLLGPDFEPQITDFGL-AKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEK 430
R+IK+ N+LLG D ++TDFG A+ P + + GT ++APE K
Sbjct: 141 RNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV---GTPYWMAPEVVTRKAYGPK 197
Query: 431 TDVFAFGVLLLEIITGRKP 449
D+++ G++ +E+I G P
Sbjct: 198 VDIWSLGIMAIEMIEGEPP 216
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 132/337 (39%), Gaps = 90/337 (26%)
Query: 254 VGQGGYSEVYKGNL------SDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHP-NT 306
+G+G + +V + + R +AVK L + EL I+ H+ H N
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKA-LMTELKILTHIGHHLNV 93
Query: 307 ATLVGCCIENG--LYLIFNFSQNGNL---------------DAALHDE------------ 337
L+G C + G L +I + + GNL DAALH E
Sbjct: 94 VNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFLNKDAALHMEPKKEKMEPGLEQ 153
Query: 338 ---------------------RSKSL-------------EWPIRYKIVLG----VARGLH 359
KSL + PI + ++ VARG+
Sbjct: 154 GKKPRLDSVTSSESFASSGFQEDKSLSDVEEEEDSDGFYKEPITMEDLISYSFQVARGME 213
Query: 360 YLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAP 419
+L R+ IHRD+ A N+LL + +I DFGLA+ + + ++AP
Sbjct: 214 FLSS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAP 270
Query: 420 EYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNLTELVDPSL 478
E I K+DV+++GVLL EI + G P + + ++ L E +
Sbjct: 271 ESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSR-LREGMRMR------- 322
Query: 479 EGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELL 515
EY T ++++++L C + RP +E++E L
Sbjct: 323 APEYSTPEIYQIMLD---CWHRDPKERPRFAELVEKL 356
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 110/269 (40%), Gaps = 31/269 (11%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNT------ 306
+G+G + VYKG + ++A L F E + + HPN
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 307 --ATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKG 364
+T+ G + + L+ +G L L +R K + + + +GL +LH
Sbjct: 94 WESTVKG---KKCIVLVTELXTSGTLKTYL--KRFKVXKIKVLRSWCRQILKGLQFLHTR 148
Query: 365 CKRRIIHRDIKASNVLL-GPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFM 423
IIHRD+K N+ + GP +I D GLA L A I GT + APE +
Sbjct: 149 TPP-IIHRDLKCDNIFITGPTGSVKIGDLGLAT-LKRASFAKAVI---GTPEFXAPEXYE 203
Query: 424 HGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEGEYD 483
DE DV+AFG LE T P + ++ + +T V P+ +D
Sbjct: 204 EKY-DESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRR-------VTSGVKPA---SFD 252
Query: 484 TDQMHRLVLIADYCVRQTSAWRPSMSEVL 512
+ + I + C+RQ R S+ ++L
Sbjct: 253 KVAIPEVKEIIEGCIRQNKDERYSIKDLL 281
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 89/217 (41%), Gaps = 18/217 (8%)
Query: 244 ATNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVC 302
AT+ + +G G Y VYK + G +A+K + + E+ ++ +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 303 ---HPNTATLVGCCI------ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLG 353
HPN L+ C E + L+F + +L L L ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGT 413
RGL +LH C I+HRD+K N+L+ ++ DFGLA+ A P+ T
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALAPVVVT 174
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPV 450
Y APE + D+++ G + E+ RKP+
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 96/233 (41%), Gaps = 41/233 (17%)
Query: 246 NNFHSENMVGQGGYSEVYK------GNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIG 299
NN +G G + +V + G K+AVK L + EL I+
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA-LMSELKIMS 89
Query: 300 HVC-HPNTATLVGCCIENGLYLI----------FNFSQN------------GNLDAALHD 336
H+ H N L+G C G L+ NF + G L
Sbjct: 90 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDK 149
Query: 337 ERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAK 396
E + LE VA+G+ +L + IHRD+ A NVLL +I DFGLA+
Sbjct: 150 EDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 206
Query: 397 WLPNKCTH----HAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
+ N + +A +P++ ++APE + ++DV+++G+LL EI +
Sbjct: 207 DIMNDSNYIVKGNARLPVK----WMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 120/274 (43%), Gaps = 29/274 (10%)
Query: 253 MVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLM--ELGIIGHVCHPNTATLV 310
+G+GG+++ Y+ D +++ ++ M E+ I + +P+
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 311 GCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRI 369
G ++ +Y++ + +L LH R E RY + +G+ YLH R+
Sbjct: 109 GFFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARY-FMRQTIQGVQYLHNN---RV 163
Query: 370 IHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDE 429
IHRD+K N+ L D + +I DFGLA + + GT Y+APE
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT--LCGTPNYIAPEVLCKKGHSF 221
Query: 430 KTDVFAFGVLLLEIITGRKPVDSS--RQNLVLWAKPLMESGNLTELVDPSLEGEYDTDQM 487
+ D+++ G +L ++ G+ P ++S ++ + K ++ ++P +
Sbjct: 222 EVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKK---NEYSVPRHINPV------ASAL 272
Query: 488 HRLVLIADYCVRQTSAWRPSMSEVL--ELLTSGH 519
R +L AD RPS++E+L E TSG+
Sbjct: 273 IRRMLHAD------PTLRPSVAELLTDEFFTSGY 300
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 93/200 (46%), Gaps = 10/200 (5%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + V G +A+K + F+ E ++ ++ H L G C
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE---FIEEAKVMMNLSHEKLVQLYGVC 72
Query: 314 I-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHR 372
+ +++I + NG L L + R + + ++ V + YL ++ +HR
Sbjct: 73 TKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLES---KQFLHR 128
Query: 373 DIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTD 432
D+ A N L+ +++DFGL++++ + + +++ + + PE M+ K+D
Sbjct: 129 DLAARNCLVNDQGVVKVSDFGLSRYVLDD-EYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 187
Query: 433 VFAFGVLLLEIIT-GRKPVD 451
++AFGVL+ EI + G+ P +
Sbjct: 188 IWAFGVLMWEIYSLGKMPYE 207
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 128/306 (41%), Gaps = 29/306 (9%)
Query: 221 GSLSNKEKHQPLLTCFSYEEISSATNNFHSENMVGQGGYSEVYKGNLSDGRKIAVKRLXX 280
G L + K PL + +G+GG+++ Y+ D +++ ++
Sbjct: 1 GPLGSDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVP 60
Query: 281 XXXXXXXXXXFLM--ELGIIGHVCHPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDE 337
M E+ I + +P+ G ++ +Y++ + +L LH
Sbjct: 61 KSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL-LELHKR 119
Query: 338 RSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKW 397
R E RY + +G+ YLH R+IHRD+K N+ L D + +I DFGLA
Sbjct: 120 RKAVTEPEARY-FMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATK 175
Query: 398 LPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSS--RQ 455
+ + + GT Y+APE + D+++ G +L ++ G+ P ++S ++
Sbjct: 176 I--EFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKE 233
Query: 456 NLVLWAKPLMESGNLTELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVL--E 513
+ K ++ ++P + R +L AD RPS++E+L E
Sbjct: 234 TYIRIKK---NEYSVPRHINPV------ASALIRRMLHAD------PTLRPSVAELLTDE 278
Query: 514 LLTSGH 519
TSG+
Sbjct: 279 FFTSGY 284
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 93/200 (46%), Gaps = 10/200 (5%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + V G +A+K + F+ E ++ ++ H L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE---FIEEAKVMMNLSHEKLVQLYGVC 88
Query: 314 I-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHR 372
+ +++I + NG L L + R + + ++ V + YL ++ +HR
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLES---KQFLHR 144
Query: 373 DIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTD 432
D+ A N L+ +++DFGL++++ + + +++ + + PE M+ K+D
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDD-EYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 203
Query: 433 VFAFGVLLLEIIT-GRKPVD 451
++AFGVL+ EI + G+ P +
Sbjct: 204 IWAFGVLMWEIYSLGKMPYE 223
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 120/274 (43%), Gaps = 29/274 (10%)
Query: 253 MVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLM--ELGIIGHVCHPNTATLV 310
+G+GG+++ Y+ D +++ ++ M E+ I + +P+
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 311 GCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRI 369
G ++ +Y++ + +L LH R E RY + +G+ YLH R+
Sbjct: 109 GFFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARY-FMRQTIQGVQYLHNN---RV 163
Query: 370 IHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDE 429
IHRD+K N+ L D + +I DFGLA + + GT Y+APE
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKX--LCGTPNYIAPEVLCKKGHSF 221
Query: 430 KTDVFAFGVLLLEIITGRKPVDSS--RQNLVLWAKPLMESGNLTELVDPSLEGEYDTDQM 487
+ D+++ G +L ++ G+ P ++S ++ + K ++ ++P +
Sbjct: 222 EVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKK---NEYSVPRHINPV------ASAL 272
Query: 488 HRLVLIADYCVRQTSAWRPSMSEVL--ELLTSGH 519
R +L AD RPS++E+L E TSG+
Sbjct: 273 IRRMLHAD------PTLRPSVAELLTDEFFTSGY 300
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 93/200 (46%), Gaps = 10/200 (5%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + V G +A+K + F+ E ++ ++ H L G C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE---FIEEAKVMMNLSHEKLVQLYGVC 68
Query: 314 I-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHR 372
+ +++I + NG L L + R + + ++ V + YL ++ +HR
Sbjct: 69 TKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLES---KQFLHR 124
Query: 373 DIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTD 432
D+ A N L+ +++DFGL++++ + + +++ + + PE M+ K+D
Sbjct: 125 DLAARNCLVNDQGVVKVSDFGLSRYVLDD-EYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 183
Query: 433 VFAFGVLLLEIIT-GRKPVD 451
++AFGVL+ EI + G+ P +
Sbjct: 184 IWAFGVLMWEIYSLGKMPYE 203
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 105/254 (41%), Gaps = 18/254 (7%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELG--IIGHVC 302
++FH ++G+G + +V + ++ AVK L +M ++ +V
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97
Query: 303 HPNTATL-VGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYL 361
HP L + LY + ++ G L L ER LE R+ +A L YL
Sbjct: 98 HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERC-FLEPRARF-YAAEIASALGYL 155
Query: 362 HKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAI-PIEGTFGYLAPE 420
H I++RD+K N+LL +TDFGL K H++ GT YLAPE
Sbjct: 156 HS---LNIVYRDLKPENILLDSQGHIVLTDFGLCK---ENIEHNSTTSTFCGTPEYLAPE 209
Query: 421 YFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLW----AKPLMESGNLTELVDP 476
D D + G +L E++ G P SR ++ KPL N+T
Sbjct: 210 VLHKQPYDRTVDWWCLGAVLYEMLYGLPPF-YSRNTAEMYDNILNKPLQLKPNITNSARH 268
Query: 477 SLEGEYDTDQMHRL 490
LEG D+ RL
Sbjct: 269 LLEGLLQKDRTKRL 282
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 25/205 (12%)
Query: 254 VGQGGYSEVYKGNLSDGR---KIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLV 310
VG G Y V DGR K+A+K+L EL ++ H+ H N L+
Sbjct: 33 VGSGAYGAVCSA--VDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLL 90
Query: 311 GCCIEN-------GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHK 363
+ YL+ F +L + E K E I++ +V + +GL Y+H
Sbjct: 91 DVFTPDETLDDFTDFYLVMPF-MGTDLGKLMKHE--KLGEDRIQF-LVYQMLKGLRYIHA 146
Query: 364 GCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFM 423
IIHRD+K N+ + D E +I DFGLA+ ++ T Y APE +
Sbjct: 147 AG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVV-----TRWYRAPEVIL 198
Query: 424 HGI-IDEKTDVFAFGVLLLEIITGR 447
+ + + D+++ G ++ E+ITG+
Sbjct: 199 NWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 93/200 (46%), Gaps = 10/200 (5%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + V G +A+K + F+ E ++ ++ H L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE---FIEEAKVMMNLSHEKLVQLYGVC 73
Query: 314 I-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHR 372
+ +++I + NG L L + R + + ++ V + YL ++ +HR
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLES---KQFLHR 129
Query: 373 DIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTD 432
D+ A N L+ +++DFGL++++ + + +++ + + PE M+ K+D
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDD-EYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 188
Query: 433 VFAFGVLLLEIIT-GRKPVD 451
++AFGVL+ EI + G+ P +
Sbjct: 189 IWAFGVLMWEIYSLGKMPYE 208
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 89/217 (41%), Gaps = 18/217 (8%)
Query: 244 ATNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVC 302
AT+ + +G G Y VYK + G +A+K + + E+ ++ +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 303 ---HPNTATLVGCCI------ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLG 353
HPN L+ C E + L+F + +L L L ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGT 413
RGL +LH C I+HRD+K N+L+ ++ DFGLA+ A P+ T
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALDPVVVT 174
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPV 450
Y APE + D+++ G + E+ RKP+
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 93/200 (46%), Gaps = 10/200 (5%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + V G +A+K + F+ E ++ ++ H L G C
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE---FIEEAKVMMNLSHEKLVQLYGVC 79
Query: 314 I-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHR 372
+ +++I + NG L L + R + + ++ V + YL ++ +HR
Sbjct: 80 TKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLES---KQFLHR 135
Query: 373 DIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTD 432
D+ A N L+ +++DFGL++++ + + +++ + + PE M+ K+D
Sbjct: 136 DLAARNCLVNDQGVVKVSDFGLSRYVLDD-EYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 194
Query: 433 VFAFGVLLLEIIT-GRKPVD 451
++AFGVL+ EI + G+ P +
Sbjct: 195 IWAFGVLMWEIYSLGKMPYE 214
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 121/274 (44%), Gaps = 29/274 (10%)
Query: 253 MVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLM--ELGIIGHVCHPNTATLV 310
+G+GG+++ Y+ D +++ ++ M E+ I + +P+
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 311 GCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRI 369
G ++ +Y++ + +L LH R E RY + +G+ YLH R+
Sbjct: 109 GFFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARY-FMRQTIQGVQYLHNN---RV 163
Query: 370 IHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDE 429
IHRD+K N+ L D + +I DFGLA + + + GT Y+APE
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKDLCGTPNYIAPEVLCKKGHSF 221
Query: 430 KTDVFAFGVLLLEIITGRKPVDSS--RQNLVLWAKPLMESGNLTELVDPSLEGEYDTDQM 487
+ D+++ G +L ++ G+ P ++S ++ + K ++ ++P +
Sbjct: 222 EVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKK---NEYSVPRHINPV------ASAL 272
Query: 488 HRLVLIADYCVRQTSAWRPSMSEVL--ELLTSGH 519
R +L AD RPS++E+L E TSG+
Sbjct: 273 IRRMLHAD------PTLRPSVAELLTDEFFTSGY 300
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 18/211 (8%)
Query: 248 FHSENMVGQGGYSEVYK----GNLSDGRKIAVKRLXXXXXXXXX--XXXFLMELGIIGHV 301
F ++G+GGY +V++ + G+ A+K L E I+ V
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 302 CHPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHY 360
HP L+ G LYLI + G L L E + Y + +A G +
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG--H 136
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIP--IEGTFGYLA 418
LH+ + II+RD+K N++L ++TDFGL K + H + GT Y+A
Sbjct: 137 LHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCK----ESIHDGTVTHXFCGTIEYMA 189
Query: 419 PEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
PE M + D ++ G L+ +++TG P
Sbjct: 190 PEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 18/211 (8%)
Query: 248 FHSENMVGQGGYSEVYK----GNLSDGRKIAVKRLXXXXXXXXX--XXXFLMELGIIGHV 301
F ++G+GGY +V++ + G+ A+K L E I+ V
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 302 CHPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHY 360
HP L+ G LYLI + G L L E + Y + +A G +
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG--H 136
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAI--PIEGTFGYLA 418
LH+ + II+RD+K N++L ++TDFGL K + H + GT Y+A
Sbjct: 137 LHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCK----ESIHDGTVTHTFCGTIEYMA 189
Query: 419 PEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
PE M + D ++ G L+ +++TG P
Sbjct: 190 PEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 75/158 (47%), Gaps = 24/158 (15%)
Query: 311 GCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHK------- 363
G +E L+LI F G+L L + + W + ++RGL YLH+
Sbjct: 81 GSNLEVELWLITAFHDKGSLTDYL---KGNIITWNELCHVAETMSRGLSYLHEDVPWCRG 137
Query: 364 -GCKRRIIHRDIKASNVLLGPDFEPQITDFGLA-KWLPNK--CTHHAAIPIEGTFGYLAP 419
G K I HRD K+ NVLL D + DFGLA ++ P K H + GT Y+AP
Sbjct: 138 EGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQV---GTRRYMAP 194
Query: 420 EYFMHGIIDEKTDVF------AFGVLLLEIITGRKPVD 451
E + G I+ + D F A G++L E+++ K D
Sbjct: 195 E-VLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 92/203 (45%), Gaps = 16/203 (7%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + V G +A+K + F+ E ++ ++ H L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE---FIEEAKVMMNLSHEKLVQLYGVC 73
Query: 314 I-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHR 372
+ +++I + NG L L + R + + ++ V + YL ++ +HR
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLES---KQFLHR 129
Query: 373 DIKASNVLLGPDFEPQITDFGLAKWLPNK---CTHHAAIPIEGTFGYLAPEYFMHGIIDE 429
D+ A N L+ +++DFGL++++ + + + P+ + PE M+
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWS----PPEVLMYSKFSS 185
Query: 430 KTDVFAFGVLLLEIIT-GRKPVD 451
K+D++AFGVL+ EI + G+ P +
Sbjct: 186 KSDIWAFGVLMWEIYSLGKMPYE 208
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 75/166 (45%), Gaps = 16/166 (9%)
Query: 291 FLMELGIIGHVCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPI-RYK 349
F+ E+ + + H N L G + + ++ + G+L L + L + RY
Sbjct: 62 FIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYA 121
Query: 350 IVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTH----- 404
+ VA G+ YL +R IHRD+ A N+LL +I DFGL + LP H
Sbjct: 122 V--QVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE 176
Query: 405 HAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKP 449
H +P F + APE +D + FGV L E+ T G++P
Sbjct: 177 HRKVP----FAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 84/208 (40%), Gaps = 24/208 (11%)
Query: 252 NMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVG 311
+++G G +SEV +K+ + E+ ++ + HPN L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 312 CCIENG-LYLIFNFSQNGNL-----DAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGC 365
G LYLI G L + + ER S +++ V + YLH
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-------RLIFQVLDAVKYLHD-- 134
Query: 366 KRRIIHRDIKASNVL---LGPDFEPQITDFGLAKWL-PNKCTHHAAIPIEGTFGYLAPEY 421
I+HRD+K N+L L D + I+DFGL+K P A GT GY+APE
Sbjct: 135 -LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC----GTPGYVAPEV 189
Query: 422 FMHGIIDEKTDVFAFGVLLLEIITGRKP 449
+ D ++ GV+ ++ G P
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 100/238 (42%), Gaps = 42/238 (17%)
Query: 246 NNFHSENMVGQGGYSEVYKGN------LSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIG 299
NN +G+G + V++ +AVK L F E ++
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQAD-FQREAALMA 105
Query: 300 HVCHPNTATLVG-CCIENGLYLIFNFSQNGNLDAAL------------HDERSK------ 340
+PN L+G C + + L+F + G+L+ L H + S
Sbjct: 106 EFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSS 165
Query: 341 ----SLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAK 396
L + I VA G+ YL + R+ +HRD+ N L+G + +I DFGL++
Sbjct: 166 PGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSR 222
Query: 397 WLPNKCTHHA----AIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKP 449
+ + + A AIPI ++ PE + ++DV+A+GV+L EI + G +P
Sbjct: 223 NIYSADYYKADGNDAIPIR----WMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP 276
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 84/208 (40%), Gaps = 24/208 (11%)
Query: 252 NMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVG 311
+++G G +SEV +K+ + E+ ++ + HPN L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 312 CCIENG-LYLIFNFSQNGNL-----DAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGC 365
G LYLI G L + + ER S +++ V + YLH
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-------RLIFQVLDAVKYLHD-- 134
Query: 366 KRRIIHRDIKASNVL---LGPDFEPQITDFGLAKWL-PNKCTHHAAIPIEGTFGYLAPEY 421
I+HRD+K N+L L D + I+DFGL+K P A GT GY+APE
Sbjct: 135 -LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC----GTPGYVAPEV 189
Query: 422 FMHGIIDEKTDVFAFGVLLLEIITGRKP 449
+ D ++ GV+ ++ G P
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 92/200 (46%), Gaps = 10/200 (5%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
+G G + V G +A+K + F+ E ++ ++ H L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE---FIEEAKVMMNLSHEKLVQLYGVC 88
Query: 314 I-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHR 372
+ +++I + NG L L + R + + ++ V + YL ++ +HR
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLES---KQFLHR 144
Query: 373 DIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTD 432
D+ A N L+ +++DFGL++++ + +++ + + PE M+ K+D
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDD-EETSSVGSKFPVRWSPPEVLMYSKFSSKSD 203
Query: 433 VFAFGVLLLEIIT-GRKPVD 451
++AFGVL+ EI + G+ P +
Sbjct: 204 IWAFGVLMWEIYSLGKMPYE 223
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 84/208 (40%), Gaps = 24/208 (11%)
Query: 252 NMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVG 311
+++G G +SEV +K+ + E+ ++ + HPN L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 312 CCIENG-LYLIFNFSQNGNL-----DAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGC 365
G LYLI G L + + ER S +++ V + YLH
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-------RLIFQVLDAVKYLHD-- 134
Query: 366 KRRIIHRDIKASNVL---LGPDFEPQITDFGLAKWL-PNKCTHHAAIPIEGTFGYLAPEY 421
I+HRD+K N+L L D + I+DFGL+K P A GT GY+APE
Sbjct: 135 -LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC----GTPGYVAPEV 189
Query: 422 FMHGIIDEKTDVFAFGVLLLEIITGRKP 449
+ D ++ GV+ ++ G P
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 84/208 (40%), Gaps = 24/208 (11%)
Query: 252 NMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVG 311
+++G G +SEV +K+ + E+ ++ + HPN L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 312 CCIENG-LYLIFNFSQNGNL-----DAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGC 365
G LYLI G L + + ER S +++ V + YLH
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-------RLIFQVLDAVKYLHD-- 134
Query: 366 KRRIIHRDIKASNVL---LGPDFEPQITDFGLAKWL-PNKCTHHAAIPIEGTFGYLAPEY 421
I+HRD+K N+L L D + I+DFGL+K P A GT GY+APE
Sbjct: 135 -LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC----GTPGYVAPEV 189
Query: 422 FMHGIIDEKTDVFAFGVLLLEIITGRKP 449
+ D ++ GV+ ++ G P
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 100/206 (48%), Gaps = 19/206 (9%)
Query: 253 MVGQGGYSEVYKGNLSD--GRKIAVK-RLXXXXXXXXXXXXFLMELGIIGHVCHPNTATL 309
++G+G + EVY+G ++ G KI V + F+ E I+ ++ HP+ L
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 310 VGCCIENGLYLIFNFSQNGNLDAALHDERSK-SLEWPIRYKIVLGVARGLHYLHK-GCKR 367
+G E ++I G L L ER+K SL+ L + + + YL C
Sbjct: 91 IGIIEEEPTWIIMELYPYGELGHYL--ERNKNSLKVLTLVLYSLQICKAMAYLESINC-- 146
Query: 368 RIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAI---PIEGTFGYLAPEYFMH 424
+HRDI N+L+ ++ DFGL++++ ++ + A++ PI+ +++PE
Sbjct: 147 --VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK----WMSPESINF 200
Query: 425 GIIDEKTDVFAFGVLLLEIIT-GRKP 449
+DV+ F V + EI++ G++P
Sbjct: 201 RRFTTASDVWMFAVCMWEILSFGKQP 226
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 75/166 (45%), Gaps = 16/166 (9%)
Query: 291 FLMELGIIGHVCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPI-RYK 349
F+ E+ + + H N L G + + ++ + G+L L + L + RY
Sbjct: 68 FIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYA 127
Query: 350 IVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTH----- 404
+ VA G+ YL +R IHRD+ A N+LL +I DFGL + LP H
Sbjct: 128 V--QVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQE 182
Query: 405 HAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKP 449
H +P F + APE +D + FGV L E+ T G++P
Sbjct: 183 HRKVP----FAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 75/166 (45%), Gaps = 16/166 (9%)
Query: 291 FLMELGIIGHVCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPI-RYK 349
F+ E+ + + H N L G + + ++ + G+L L + L + RY
Sbjct: 68 FIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYA 127
Query: 350 IVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTH----- 404
+ VA G+ YL +R IHRD+ A N+LL +I DFGL + LP H
Sbjct: 128 V--QVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE 182
Query: 405 HAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKP 449
H +P F + APE +D + FGV L E+ T G++P
Sbjct: 183 HRKVP----FAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 75/166 (45%), Gaps = 16/166 (9%)
Query: 291 FLMELGIIGHVCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPI-RYK 349
F+ E+ + + H N L G + + ++ + G+L L + L + RY
Sbjct: 62 FIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYA 121
Query: 350 IVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTH----- 404
+ VA G+ YL +R IHRD+ A N+LL +I DFGL + LP H
Sbjct: 122 V--QVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE 176
Query: 405 HAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKP 449
H +P F + APE +D + FGV L E+ T G++P
Sbjct: 177 HRKVP----FAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 10/163 (6%)
Query: 291 FLMELGIIGHVCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIR--Y 348
+ E I+ + +P L+G C L L+ + G L L +R E P+
Sbjct: 57 MMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKRE---EIPVSNVA 113
Query: 349 KIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAI 408
+++ V+ G+ YL + + +HRD+ A NVLL +I+DFGL+K L +++ A
Sbjct: 114 ELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR 170
Query: 409 PI-EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKP 449
+ + APE ++DV+++GV + E ++ G+KP
Sbjct: 171 SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 77/161 (47%), Gaps = 27/161 (16%)
Query: 311 GCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHK------- 363
G ++ L+LI F + G+L L ++ + W I +ARGL YLH+
Sbjct: 90 GTSVDVDLWLITAFHEKGSLSDFL---KANVVSWNELCHIAETMARGLAYLHEDIPGLKD 146
Query: 364 GCKRRIIHRDIKASNVLLGPDFEPQITDFGLA-KWLPNKCT--HHAAIPIEGTFGYLAPE 420
G K I HRDIK+ NVLL + I DFGLA K+ K H + GT Y+APE
Sbjct: 147 GHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQV---GTRRYMAPE 203
Query: 421 YFMHGIIDEKTDVF------AFGVLLLEIIT----GRKPVD 451
+ G I+ + D F A G++L E+ + PVD
Sbjct: 204 -VLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVD 243
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 75/166 (45%), Gaps = 16/166 (9%)
Query: 291 FLMELGIIGHVCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPI-RYK 349
F+ E+ + + H N L G + + ++ + G+L L + L + RY
Sbjct: 58 FIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYA 117
Query: 350 IVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTH----- 404
+ VA G+ YL +R IHRD+ A N+LL +I DFGL + LP H
Sbjct: 118 V--QVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQE 172
Query: 405 HAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKP 449
H +P F + APE +D + FGV L E+ T G++P
Sbjct: 173 HRKVP----FAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 75/166 (45%), Gaps = 16/166 (9%)
Query: 291 FLMELGIIGHVCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPI-RYK 349
F+ E+ + + H N L G + + ++ + G+L L + L + RY
Sbjct: 58 FIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYA 117
Query: 350 IVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTH----- 404
+ VA G+ YL +R IHRD+ A N+LL +I DFGL + LP H
Sbjct: 118 V--QVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE 172
Query: 405 HAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKP 449
H +P F + APE +D + FGV L E+ T G++P
Sbjct: 173 HRKVP----FAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 75/166 (45%), Gaps = 16/166 (9%)
Query: 291 FLMELGIIGHVCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPI-RYK 349
F+ E+ + + H N L G + + ++ + G+L L + L + RY
Sbjct: 58 FIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYA 117
Query: 350 IVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTH----- 404
+ VA G+ YL +R IHRD+ A N+LL +I DFGL + LP H
Sbjct: 118 V--QVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE 172
Query: 405 HAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKP 449
H +P F + APE +D + FGV L E+ T G++P
Sbjct: 173 HRKVP----FAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 100/206 (48%), Gaps = 19/206 (9%)
Query: 253 MVGQGGYSEVYKGNLSD--GRKIAVK-RLXXXXXXXXXXXXFLMELGIIGHVCHPNTATL 309
++G+G + EVY+G ++ G KI V + F+ E I+ ++ HP+ L
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 310 VGCCIENGLYLIFNFSQNGNLDAALHDERSK-SLEWPIRYKIVLGVARGLHYLHK-GCKR 367
+G E ++I G L L ER+K SL+ L + + + YL C
Sbjct: 75 IGIIEEEPTWIIMELYPYGELGHYL--ERNKNSLKVLTLVLYSLQICKAMAYLESINC-- 130
Query: 368 RIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAI---PIEGTFGYLAPEYFMH 424
+HRDI N+L+ ++ DFGL++++ ++ + A++ PI+ +++PE
Sbjct: 131 --VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK----WMSPESINF 184
Query: 425 GIIDEKTDVFAFGVLLLEIIT-GRKP 449
+DV+ F V + EI++ G++P
Sbjct: 185 RRFTTASDVWMFAVCMWEILSFGKQP 210
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 100/206 (48%), Gaps = 19/206 (9%)
Query: 253 MVGQGGYSEVYKGNLSD--GRKIAVK-RLXXXXXXXXXXXXFLMELGIIGHVCHPNTATL 309
++G+G + EVY+G ++ G KI V + F+ E I+ ++ HP+ L
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 310 VGCCIENGLYLIFNFSQNGNLDAALHDERSK-SLEWPIRYKIVLGVARGLHYLHK-GCKR 367
+G E ++I G L L ER+K SL+ L + + + YL C
Sbjct: 79 IGIIEEEPTWIIMELYPYGELGHYL--ERNKNSLKVLTLVLYSLQICKAMAYLESINC-- 134
Query: 368 RIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAI---PIEGTFGYLAPEYFMH 424
+HRDI N+L+ ++ DFGL++++ ++ + A++ PI+ +++PE
Sbjct: 135 --VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK----WMSPESINF 188
Query: 425 GIIDEKTDVFAFGVLLLEIIT-GRKP 449
+DV+ F V + EI++ G++P
Sbjct: 189 RRFTTASDVWMFAVCMWEILSFGKQP 214
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 29/171 (16%)
Query: 303 HPNTATLVGCCIENG-LYLIFNFSQNGNL------DAALHDERSKSLEWPIRYKIVLGVA 355
HP+ TL+ + ++L+F+ + G L AL ++ ++S I+ +
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRS--------IMRSLL 210
Query: 356 RGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL-PNKCTHHAAIPIEGTF 414
+ +LH I+HRD+K N+LL + + +++DFG + L P + GT
Sbjct: 211 EAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELC----GTP 263
Query: 415 GYLAPEYF------MHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVL 459
GYLAPE H ++ D++A GV+L ++ G P RQ L+L
Sbjct: 264 GYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILML 314
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGT 413
+ GL LH+ RI++RD+K N+LL +I+D GLA +P T + GT
Sbjct: 295 ICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV---GT 348
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNL 457
GY+APE + D +A G LL E+I G+ P ++ +
Sbjct: 349 VGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI 392
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGT 413
+ GL LH+ RI++RD+K N+LL +I+D GLA +P T + GT
Sbjct: 295 ICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV---GT 348
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNL 457
GY+APE + D +A G LL E+I G+ P ++ +
Sbjct: 349 VGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI 392
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 29/210 (13%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXX------XXXXXXXXXFLMELGIIGHVCHPNTA 307
VG+G Y EV++G+ G +AVK L I+G + T+
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTS 74
Query: 308 TLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLH----- 362
L+LI ++ + G+L L + +L+ +IVL +A GL +LH
Sbjct: 75 RHSS----TQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 363 KGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAI---PIEGTFGYLAP 419
K I HRD+K+ N+L+ + + I D GLA + ++ T+ + P GT Y+AP
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAV-MHSQSTNQLDVGNNPRVGTKRYMAP 186
Query: 420 EYFMHGI-ID-----EKTDVFAFGVLLLEI 443
E I +D ++ D++AFG++L E+
Sbjct: 187 EVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 9/167 (5%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIE--NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYK 349
++E ++ P T + C + + LY + + G+L H ++ + P
Sbjct: 389 MVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL--MYHIQQVGRFKEPHAVF 446
Query: 350 IVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIP 409
+A GL +L + II+RD+K NV+L + +I DFG+ K N
Sbjct: 447 YAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKX 501
Query: 410 IEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQN 456
GT Y+APE + + D +AFGVLL E++ G+ P + ++
Sbjct: 502 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED 548
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 29/210 (13%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXX------XXXXXXXXXFLMELGIIGHVCHPNTA 307
VG+G Y EV++G+ G +AVK L I+G + T+
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTS 74
Query: 308 TLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLH----- 362
L+LI ++ + G+L L + +L+ +IVL +A GL +LH
Sbjct: 75 RHSS----TQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 363 KGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAI---PIEGTFGYLAP 419
K I HRD+K+ N+L+ + + I D GLA + ++ T+ + P GT Y+AP
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAV-MHSQSTNQLDVGNNPRVGTKRYMAP 186
Query: 420 EYFMHGI-ID-----EKTDVFAFGVLLLEI 443
E I +D ++ D++AFG++L E+
Sbjct: 187 EVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 29/210 (13%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXX------XXXXXXXXXFLMELGIIGHVCHPNTA 307
VG+G Y EV++G+ G +AVK L I+G + T+
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTS 103
Query: 308 TLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLH----- 362
L+LI ++ + G+L L + +L+ +IVL +A GL +LH
Sbjct: 104 RHSS----TQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFG 156
Query: 363 KGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAI---PIEGTFGYLAP 419
K I HRD+K+ N+L+ + + I D GLA + ++ T+ + P GT Y+AP
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAV-MHSQSTNQLDVGNNPRVGTKRYMAP 215
Query: 420 EYFMHGI-ID-----EKTDVFAFGVLLLEI 443
E I +D ++ D++AFG++L E+
Sbjct: 216 EVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 41/216 (18%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVC--HPNTATLVG 311
VG+G Y EV++G L G +AVK + E I V H N +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVK-----IFSSRDEQSWFRETEIYNTVLLRHDNILGFIA 69
Query: 312 CCI-----ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLH---- 362
+ L+LI ++ ++G+L L + ++LE + ++ + A GL +LH
Sbjct: 70 SDMTSRNSSTQLWLITHYHEHGSLYDFL---QRQTLEPHLALRLAVSAACGLAHLHVEIF 126
Query: 363 -KGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAI---PIEGTFGYLA 418
K I HRD K+ NVL+ + + I D GLA + ++ + + I P GT Y+A
Sbjct: 127 GTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAV-MHSQGSDYLDIGNNPRVGTKRYMA 185
Query: 419 PEYFMHGIIDEK-----------TDVFAFGVLLLEI 443
PE ++DE+ TD++AFG++L EI
Sbjct: 186 PE-----VLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 23/167 (13%)
Query: 298 IGHVCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKS-----LEWPIRYKIVL 352
IG + H + L+G C + L L+ + G+L + R L W ++
Sbjct: 87 IGSLDHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ----- 141
Query: 353 GVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLP----NKCTHHAAI 408
+A+G++YL + ++HR++ A NVLL + Q+ DFG+A LP A
Sbjct: 142 -IAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKT 197
Query: 409 PIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSR 454
PI+ ++A E G ++DV+++GV + E++T G +P R
Sbjct: 198 PIK----WMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLR 240
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 89/216 (41%), Gaps = 15/216 (6%)
Query: 240 EISSATNNFHSENMVGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLM-ELGI 297
+I +F M+G+G + +V+ + A+K L M E +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 298 IGHVCHPNTATLVGCCIEN--GLYLIFNFSQNGNLDAALHDERSKSLEWPIRY--KIVLG 353
+ T + C + L+ + + G+L + L Y +I+LG
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILG 131
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGT 413
L +LH + I++RD+K N+LL D +I DFG+ K N GT
Sbjct: 132 ----LQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGDAKTNEFCGT 182
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
Y+APE + + D ++FGVLL E++ G+ P
Sbjct: 183 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 82/181 (45%), Gaps = 11/181 (6%)
Query: 270 GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC-CIENGLYLIFNFSQNG 328
G+++AVK++ E+ I+ H N + + + L+++ F + G
Sbjct: 70 GKQVAVKKMDLRKQQRREL--LFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGG 127
Query: 329 NLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQ 388
L + R + + L V R L YLH + +IHRDIK+ ++LL D +
Sbjct: 128 ALTDIVTHTRMNEEQIA---TVCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDGRIK 181
Query: 389 ITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRK 448
++DFG + + + GT ++APE + D+++ G++++E+I G
Sbjct: 182 LSDFGFCAQVSKEVPKRKX--LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEP 239
Query: 449 P 449
P
Sbjct: 240 P 240
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 23/167 (13%)
Query: 298 IGHVCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKS-----LEWPIRYKIVL 352
IG + H + L+G C + L L+ + G+L + R L W ++
Sbjct: 69 IGSLDHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ----- 123
Query: 353 GVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLP----NKCTHHAAI 408
+A+G++YL + ++HR++ A NVLL + Q+ DFG+A LP A
Sbjct: 124 -IAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKT 179
Query: 409 PIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSR 454
PI+ ++A E G ++DV+++GV + E++T G +P R
Sbjct: 180 PIK----WMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLR 222
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 9/167 (5%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIE--NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYK 349
++E ++ P T + C + + LY + + G+L H ++ + P
Sbjct: 68 MVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL--MYHIQQVGRFKEPHAVF 125
Query: 350 IVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIP 409
+A GL +L + II+RD+K NV+L + +I DFG+ K N
Sbjct: 126 YAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKX 180
Query: 410 IEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQN 456
GT Y+APE + + D +AFGVLL E++ G+ P + ++
Sbjct: 181 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED 227
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 33/222 (14%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVC-HPNTATLVG 311
+G+G Y V+K + G +AVK++ E+ I+ + H N L+
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 312 CCIENG---LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRR 368
+ +YL+F++ + +L A + R+ LE + +V + + + YLH G
Sbjct: 77 VLRADNDRDVYLVFDYMET-DLHAVI---RANILEPVHKQYVVYQLIKVIKYLHSGG--- 129
Query: 369 IIHRDIKASNVLLGPDFEPQITDFGLAKWLPN--KCTHHAAIPIE--------------- 411
++HRD+K SN+LL + ++ DFGL++ N + T++ + I
Sbjct: 130 LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTD 189
Query: 412 --GTFGYLAPEYFMHGIIDEK-TDVFAFGVLLLEIITGRKPV 450
T Y APE + K D+++ G +L EI+ G KP+
Sbjct: 190 YVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG-KPI 230
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 104/229 (45%), Gaps = 32/229 (13%)
Query: 254 VGQGGYSEVYKG---NL---SDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTA 307
+G+G + +V+ NL D +AVK L F E ++ ++ H +
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKD--FHREAELLTNLQHEHIV 78
Query: 308 TLVGCCIE-NGLYLIFNFSQNGNL---------DAALHDERS--KSLEWPIRYKIVLGVA 355
G C+E + L ++F + ++G+L DA L E + L I +A
Sbjct: 79 KFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIA 138
Query: 356 RGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN----KCTHHAAIPIE 411
G+ YL + +HRD+ N L+G + +I DFG+++ + + + H +PI
Sbjct: 139 AGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR 195
Query: 412 GTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVL 459
++ PE M+ ++DV++ GV+L EI T G++P N V+
Sbjct: 196 ----WMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVI 240
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 105/222 (47%), Gaps = 35/222 (15%)
Query: 254 VGQGGYSEVYKG---NLS---DGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTA 307
+G+G + +V+ NLS D +AVK L F E ++ ++ H +
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKD--FQREAELLTNLQHEHIV 80
Query: 308 TLVGCCIE-NGLYLIFNFSQNGNLDAALHDERSKSL----EWPIRYKIVLGVARGLH--- 359
G C + + L ++F + ++G+L+ L ++ P + K LG+++ LH
Sbjct: 81 KFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 140
Query: 360 -------YLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN----KCTHHAAI 408
YL + +HRD+ N L+G + +I DFG+++ + + + H +
Sbjct: 141 QIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTML 197
Query: 409 PIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKP 449
PI ++ PE M+ ++DV++FGV+L EI T G++P
Sbjct: 198 PIR----WMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 90/222 (40%), Gaps = 21/222 (9%)
Query: 242 SSATNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXX---XXXXXXXXXXFLMELGI 297
S AT+ + +G G Y VYK + G +A+K + + E+ +
Sbjct: 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL 64
Query: 298 IGHVC---HPNTATLVGCCI------ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRY 348
+ + HPN L+ C E + L+F + +L L L
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIK 123
Query: 349 KIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAI 408
++ RGL +LH C I+HRD+K N+L+ ++ DFGLA+ A
Sbjct: 124 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALT 177
Query: 409 PIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPV 450
P+ T Y APE + D+++ G + E+ RKP+
Sbjct: 178 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 218
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 79/184 (42%), Gaps = 18/184 (9%)
Query: 270 GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCIEN-------GLYLIF 322
G +AVK+L EL ++ V H N +L+ +YL+
Sbjct: 49 GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 108
Query: 323 NFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLG 382
+ NL +H E + Y+++ G+ +LH IIHRD+K SN+++
Sbjct: 109 EL-MDANLCQVIHMELDHERMSYLLYQMLCGIK----HLHSA---GIIHRDLKPSNIVVK 160
Query: 383 PDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLE 442
D +I DFGLA+ CT+ P T Y APE + D+++ G ++ E
Sbjct: 161 SDCTLKILDFGLAR---TACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGE 217
Query: 443 IITG 446
++ G
Sbjct: 218 LVKG 221
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 80/158 (50%), Gaps = 12/158 (7%)
Query: 315 ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLG-VARGLHYLHKGCKRRIIHRD 373
E L+LI ++ G L L +R + E + +I +G + L +LHK II+RD
Sbjct: 131 ETKLHLILDYINGGELFTHL-SQRERFTEHEV--QIYVGEIVLALEHLHK---LGIIYRD 184
Query: 374 IKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGII--DEKT 431
IK N+LL + +TDFGL+K T A GT Y+AP+ G D+
Sbjct: 185 IKLENILLDSNGHVVLTDFGLSKEFVADETER-AYDFCGTIEYMAPDIVRGGDSGHDKAV 243
Query: 432 DVFAFGVLLLEIITGRKP--VDSSRQNLVLWAKPLMES 467
D ++ GVL+ E++TG P VD + + ++ +++S
Sbjct: 244 DWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKS 281
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 117/284 (41%), Gaps = 33/284 (11%)
Query: 247 NFHSENM-----VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGH 300
+F +E++ +G+G Y V K + G+ +AVKR+ LM+L ++
Sbjct: 18 DFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQ-LLMDLDVVMR 76
Query: 301 VCH-PNTATLVGCCIENGLYLIFNFSQNGNLDA---ALHDERSKSLEWPIRYKIVLGVAR 356
P G G I + + D ++ + I KI L +
Sbjct: 77 SSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVK 136
Query: 357 GLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGY 416
L++L + K IIHRDIK SN+LL ++ DFG++ L + A G Y
Sbjct: 137 ALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSI---AKTRDAGCRPY 191
Query: 417 LAPEYFMHGI----IDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTE 472
+APE D ++DV++ G+ L E+ TGR P + N V LT+
Sbjct: 192 MAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPY--PKWNSVF--------DQLTQ 241
Query: 473 LVD---PSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLE 513
+V P L + + + + C+ + + RP E+L+
Sbjct: 242 VVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 74/167 (44%), Gaps = 14/167 (8%)
Query: 294 ELGIIGHVCHPNTATLVGCCI---ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
E+ I+ + HPN LV E+ LY++F G + K L
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQG---PVMEVPTLKPLSEDQARFY 142
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ +G+ YLH ++IIHRDIK SN+L+G D +I DFG++ K +
Sbjct: 143 FQDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEF--KGSDALLSNT 197
Query: 411 EGTFGYLAPEYF--MHGIIDEKT-DVFAFGVLLLEIITGRKPVDSSR 454
GT ++APE I K DV+A GV L + G+ P R
Sbjct: 198 VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 254 VGQGGYSEVYKGNLSDGRK---IAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLV 310
+G G + V +G +K +A+K L + E I+ + +P L+
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEE-MMREAQIMHQLDNPYIVRLI 402
Query: 311 GCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIR--YKIVLGVARGLHYLHKGCKRR 368
G C L L+ + G L L +R E P+ +++ V+ G+ YL + +
Sbjct: 403 GVCQAEALMLVMEMAGGGPLHKFLVGKRE---EIPVSNVAELLHQVSMGMKYLEE---KN 456
Query: 369 IIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI-EGTFGYLAPEYFMHGII 427
+HR++ A NVLL +I+DFGL+K L +++ A + + APE
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 516
Query: 428 DEKTDVFAFGVLLLEIIT-GRKP 449
++DV+++GV + E ++ G+KP
Sbjct: 517 SSRSDVWSYGVTMWEALSYGQKP 539
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 94/213 (44%), Gaps = 19/213 (8%)
Query: 245 TNNFHSENMVGQGGYSEVY--KGNLSDGRKIAVKRLXXXXXXXXXXXXFLM-ELGIIGHV 301
++ + +G G Y EV K L+ G + A+K + L+ E+ ++ +
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 302 CHPNTATLVGCCIEN-GLYLIFNFSQNGNL-DAALHDERSKSLEWPIRYKIVLGVARGLH 359
HPN L + YL+ + G L D + ++ ++ + K VL G
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS---GTT 118
Query: 360 YLHKGCKRRIIHRDIKASNVLL---GPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGY 416
YLHK I+HRD+K N+LL D +I DFGL+ + GT Y
Sbjct: 119 YLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL---GTAYY 172
Query: 417 LAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
+APE + DEK DV++ GV+L ++ G P
Sbjct: 173 IAPE-VLRKKYDEKCDVWSCGVILYILLCGYPP 204
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 89/216 (41%), Gaps = 15/216 (6%)
Query: 240 EISSATNNFHSENMVGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLM-ELGI 297
+I +F M+G+G + +V+ + A+K L M E +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 298 IGHVCHPNTATLVGCCIEN--GLYLIFNFSQNGNLDAALHDERSKSLEWPIRY--KIVLG 353
+ T + C + L+ + + G+L + L Y +I+LG
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILG 130
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGT 413
L +LH + I++RD+K N+LL D +I DFG+ K N GT
Sbjct: 131 ----LQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGDAKTNXFCGT 181
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
Y+APE + + D ++FGVLL E++ G+ P
Sbjct: 182 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 94/213 (44%), Gaps = 19/213 (8%)
Query: 245 TNNFHSENMVGQGGYSEVY--KGNLSDGRKIAVKRLXXXXXXXXXXXXFLM-ELGIIGHV 301
++ + +G G Y EV K L+ G + A+K + L+ E+ ++ +
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 302 CHPNTATLVGCCIEN-GLYLIFNFSQNGNL-DAALHDERSKSLEWPIRYKIVLGVARGLH 359
HPN L + YL+ + G L D + ++ ++ + K VL G
Sbjct: 79 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS---GTT 135
Query: 360 YLHKGCKRRIIHRDIKASNVLL---GPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGY 416
YLHK I+HRD+K N+LL D +I DFGL+ + GT Y
Sbjct: 136 YLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL---GTAYY 189
Query: 417 LAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
+APE + DEK DV++ GV+L ++ G P
Sbjct: 190 IAPE-VLRKKYDEKCDVWSCGVILYILLCGYPP 221
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 99/221 (44%), Gaps = 32/221 (14%)
Query: 246 NNFH--SENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIG--- 299
NNF+ + +G+G ++ V + + S G++ A K L L E+ ++
Sbjct: 27 NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAK 86
Query: 300 --------HVCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV 351
H + NT+ ++ LI ++ G + + E ++ + +++
Sbjct: 87 SCPRVINLHEVYENTSEII---------LILEYAAGGEIFSLCLPELAEMVSENDVIRLI 137
Query: 352 LGVARGLHYLHKGCKRRIIHRDIKASNVLLG---PDFEPQITDFGLAKWLPNKCTHHAAI 408
+ G++YLH+ I+H D+K N+LL P + +I DFG+++ + + C
Sbjct: 138 KQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELRE-- 192
Query: 409 PIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
I GT YLAPE + I TD++ G++ ++T P
Sbjct: 193 -IMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSP 232
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 148/377 (39%), Gaps = 52/377 (13%)
Query: 138 PGGCTIHIFGETKSENPSPRTVLDELEGESNTTEDDTFSVEDSSISQSPPQAPKTKGLSN 197
PG + G +++ + +LDE E S T +S+ + P P N
Sbjct: 61 PGAPKTIVRGSKGAKDGALTLLLDEFENMSVT--------RSNSLRRDSPPPPARARQEN 112
Query: 198 TRMRMSPGKFFTSILSSPLRKRNGSLSNKEKHQPLLTCFSYEEISSATNNFHSENMVGQG 257
PG SP R+ +S+++ L + S +NF +G+G
Sbjct: 113 GMPEKPPGP------RSPQREPQ-RVSHEQFRAALQLVVDPGDPRSYLDNFIK---IGEG 162
Query: 258 GYSEVYKGNL-SDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC-CIE 315
V + S G+ +AVK++ E+ I+ H N + +
Sbjct: 163 STGIVCIATVRSSGKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNSYLVG 220
Query: 316 NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIK 375
+ L+++ F + G L + R + + L V + L LH + +IHRDIK
Sbjct: 221 DELWVVMEFLEGGALTDIVTHTRMNEEQI---AAVCLAVLQALSVLHA---QGVIHRDIK 274
Query: 376 ASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFA 435
+ ++LL D +++DFG + + + GT ++APE + D+++
Sbjct: 275 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISRLPYGPEVDIWS 332
Query: 436 FGVLLLEIITGRKP---------VDSSRQNLVLWAKPLMESGNLTELVDPSLEGEYDTDQ 486
G++++E++ G P + R NL K L + V PSL+G D
Sbjct: 333 LGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHK-------VSPSLKGFLDR-- 383
Query: 487 MHRLVLIADYCVRQTSA 503
+L+ D R T+A
Sbjct: 384 ----LLVRDPAQRATAA 396
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 98/235 (41%), Gaps = 11/235 (4%)
Query: 219 RNGSLSNKEKHQPLLTCFSYEEISSATNNFHSENMVGQGGYSEV-YKGNLSDGRKIAVKR 277
R+GS S+ + + + + N F ++G+G + +V + GR A+K
Sbjct: 124 RSGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKI 183
Query: 278 LXXXXXXXXXXXXF-LMELGIIGHVCHPN-TATLVGCCIENGLYLIFNFSQNGNLDAALH 335
L L E ++ + HP TA + L + ++ G L L
Sbjct: 184 LKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLS 243
Query: 336 DERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLA 395
ER S + Y + L YLH ++ +++RD+K N++L D +ITDFGL
Sbjct: 244 RERVFSEDRARFYGA--EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLC 299
Query: 396 K-WLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
K + + T GT YLAPE D + GV++ E++ GR P
Sbjct: 300 KEGIKDGATMKTFC---GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 104/241 (43%), Gaps = 27/241 (11%)
Query: 294 ELGIIGHVCHPNTATLVGCCIENG---LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
E+ I+ + H + GCC + G L L+ + G+L L S L + +
Sbjct: 83 EIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL-PRHSIGLAQLLLF-- 139
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN-----KCTHH 405
+ G+ YLH + IHRD+ A NVLL D +I DFGLAK +P +
Sbjct: 140 AQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVRED 196
Query: 406 AAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQ------NLVL 459
P+ F Y APE +DV++FGV L E++T DSS+ L+
Sbjct: 197 GDSPV---FWY-APECLKEYKFYYASDVWSFGVTLYELLTH---CDSSQSPPTKFLELIG 249
Query: 460 WAKPLMESGNLTELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELLTSGH 519
A+ M LTEL++ + + C +++RP+ ++ +L + H
Sbjct: 250 IAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVH 309
Query: 520 D 520
+
Sbjct: 310 E 310
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 98/235 (41%), Gaps = 11/235 (4%)
Query: 219 RNGSLSNKEKHQPLLTCFSYEEISSATNNFHSENMVGQGGYSEV-YKGNLSDGRKIAVKR 277
R+GS S+ + + + + N F ++G+G + +V + GR A+K
Sbjct: 121 RSGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKI 180
Query: 278 LXXXXXXXXXXXXF-LMELGIIGHVCHPN-TATLVGCCIENGLYLIFNFSQNGNLDAALH 335
L L E ++ + HP TA + L + ++ G L L
Sbjct: 181 LKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLS 240
Query: 336 DERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLA 395
ER S + Y + L YLH ++ +++RD+K N++L D +ITDFGL
Sbjct: 241 RERVFSEDRARFYGA--EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLC 296
Query: 396 K-WLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
K + + T GT YLAPE D + GV++ E++ GR P
Sbjct: 297 KEGIKDGATMKTFC---GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 12/208 (5%)
Query: 246 NNFHSENMVGQGGYSEV-YKGNLSDGRKIAVKRLXXXXXXXXXXXXF-LMELGIIGHVCH 303
N+F ++G+G + +V + GR A+K L + E ++ + H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 304 PN-TATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLH 362
P TA + L + ++ G L L ER + E Y + L YLH
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA--EIVSALEYLH 122
Query: 363 KGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAK-WLPNKCTHHAAIPIEGTFGYLAPEY 421
R +++RDIK N++L D +ITDFGL K + + T GT YLAPE
Sbjct: 123 S---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC---GTPEYLAPEV 176
Query: 422 FMHGIIDEKTDVFAFGVLLLEIITGRKP 449
D + GV++ E++ GR P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 82/199 (41%), Gaps = 20/199 (10%)
Query: 255 GQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCI 314
QG Y L R +A+K+L EL ++ V H N L+
Sbjct: 36 AQGIVVAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFT 93
Query: 315 EN-------GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKR 367
+Y++ + NL + E + Y++++G+ +LH
Sbjct: 94 PQKSLEEFQDVYIVMEL-MDANLSQVIQMELDHERMSYLLYQMLVGIK----HLHSAG-- 146
Query: 368 RIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGII 427
IIHRD+K SN+++ D +I DFGLA+ T P T Y APE +
Sbjct: 147 -IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 428 DEKTDVFAFGVLLLEIITG 446
E D+++ GV++ E+I G
Sbjct: 203 KENVDIWSVGVIMGEMIKG 221
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 79/184 (42%), Gaps = 18/184 (9%)
Query: 270 GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCIEN-------GLYLIF 322
G +AVK+L EL ++ V H N +L+ +YL+
Sbjct: 47 GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 106
Query: 323 NFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLG 382
+ NL +H E + Y+++ G+ +LH IIHRD+K SN+++
Sbjct: 107 EL-MDANLCQVIHMELDHERMSYLLYQMLCGIK----HLHSAG---IIHRDLKPSNIVVK 158
Query: 383 PDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLE 442
D +I DFGLA+ T+ P T Y APE + E D+++ G ++ E
Sbjct: 159 SDCTLKILDFGLAR---TASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 215
Query: 443 IITG 446
++ G
Sbjct: 216 LVKG 219
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 12/208 (5%)
Query: 246 NNFHSENMVGQGGYSEV-YKGNLSDGRKIAVKRLXXXXXXXXXXXXF-LMELGIIGHVCH 303
N+F ++G+G + +V + GR A+K L + E ++ + H
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 304 PN-TATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLH 362
P TA + L + ++ G L L ER + E Y + L YLH
Sbjct: 68 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA--EIVSALEYLH 125
Query: 363 KGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAK-WLPNKCTHHAAIPIEGTFGYLAPEY 421
R +++RDIK N++L D +ITDFGL K + + T GT YLAPE
Sbjct: 126 S---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC---GTPEYLAPEV 179
Query: 422 FMHGIIDEKTDVFAFGVLLLEIITGRKP 449
D + GV++ E++ GR P
Sbjct: 180 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 82/199 (41%), Gaps = 20/199 (10%)
Query: 255 GQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCI 314
QG Y L R +A+K+L EL ++ V H N L+
Sbjct: 36 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFT 93
Query: 315 EN-------GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKR 367
+Y++ + NL + E + Y++++G+ +LH
Sbjct: 94 PQKSLEEFQDVYIVMEL-MDANLSQVIQMELDHERMSYLLYQMLVGIK----HLHSAG-- 146
Query: 368 RIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGII 427
IIHRD+K SN+++ D +I DFGLA+ T P T Y APE +
Sbjct: 147 -IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 428 DEKTDVFAFGVLLLEIITG 446
E D+++ GV++ E+I G
Sbjct: 203 KENVDIWSVGVIMGEMIKG 221
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 12/208 (5%)
Query: 246 NNFHSENMVGQGGYSEV-YKGNLSDGRKIAVKRLXXXXXXXXXXXXF-LMELGIIGHVCH 303
N+F ++G+G + +V + GR A+K L + E ++ + H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 304 PN-TATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLH 362
P TA + L + ++ G L L ER + E Y + L YLH
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA--EIVSALEYLH 122
Query: 363 KGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAK-WLPNKCTHHAAIPIEGTFGYLAPEY 421
R +++RDIK N++L D +ITDFGL K + + T GT YLAPE
Sbjct: 123 S---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC---GTPEYLAPEV 176
Query: 422 FMHGIIDEKTDVFAFGVLLLEIITGRKP 449
D + GV++ E++ GR P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 12/208 (5%)
Query: 246 NNFHSENMVGQGGYSEV-YKGNLSDGRKIAVKRLXXXXXXXXXXXXF-LMELGIIGHVCH 303
N+F ++G+G + +V + GR A+K L + E ++ + H
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 69
Query: 304 PN-TATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLH 362
P TA + L + ++ G L L ER + E Y + L YLH
Sbjct: 70 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA--EIVSALEYLH 127
Query: 363 KGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAK-WLPNKCTHHAAIPIEGTFGYLAPEY 421
R +++RDIK N++L D +ITDFGL K + + T GT YLAPE
Sbjct: 128 S---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC---GTPEYLAPEV 181
Query: 422 FMHGIIDEKTDVFAFGVLLLEIITGRKP 449
D + GV++ E++ GR P
Sbjct: 182 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 85/167 (50%), Gaps = 23/167 (13%)
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTH----HAAIP 409
VA+G+ +L R+ IHRD+ A N+LL +I DFGLA+ + + A +P
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 410 IEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESG 468
++ ++APE + ++DV++FGVLL EI + G P + + + + L E
Sbjct: 257 LK----WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLKEG- 310
Query: 469 NLTELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELL 515
T + P +Y T +M++ +L C + RP+ SE++E L
Sbjct: 311 --TRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHL 348
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 12/208 (5%)
Query: 246 NNFHSENMVGQGGYSEV-YKGNLSDGRKIAVKRLXXXXXXXXXXXXF-LMELGIIGHVCH 303
N+F ++G+G + +V + GR A+K L + E ++ + H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 304 PN-TATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLH 362
P TA + L + ++ G L L ER + E Y + L YLH
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA--EIVSALEYLH 122
Query: 363 KGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAK-WLPNKCTHHAAIPIEGTFGYLAPEY 421
R +++RDIK N++L D +ITDFGL K + + T GT YLAPE
Sbjct: 123 S---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC---GTPEYLAPEV 176
Query: 422 FMHGIIDEKTDVFAFGVLLLEIITGRKP 449
D + GV++ E++ GR P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 12/208 (5%)
Query: 246 NNFHSENMVGQGGYSEV-YKGNLSDGRKIAVKRLXXXXXXXXXXXXF-LMELGIIGHVCH 303
N+F ++G+G + +V + GR A+K L + E ++ + H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 304 PN-TATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLH 362
P TA + L + ++ G L L ER + E Y + L YLH
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA--EIVSALEYLH 122
Query: 363 KGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAK-WLPNKCTHHAAIPIEGTFGYLAPEY 421
R +++RDIK N++L D +ITDFGL K + + T GT YLAPE
Sbjct: 123 S---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC---GTPEYLAPEV 176
Query: 422 FMHGIIDEKTDVFAFGVLLLEIITGRKP 449
D + GV++ E++ GR P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 85/167 (50%), Gaps = 23/167 (13%)
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTH----HAAIP 409
VA+G+ +L R+ IHRD+ A N+LL +I DFGLA+ + + A +P
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 410 IEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESG 468
++ ++APE + ++DV++FGVLL EI + G P + + + + L E
Sbjct: 266 LK----WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLKEG- 319
Query: 469 NLTELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELL 515
T + P +Y T +M++ +L C + RP+ SE++E L
Sbjct: 320 --TRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHL 357
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 85/167 (50%), Gaps = 23/167 (13%)
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTH----HAAIP 409
VA+G+ +L R+ IHRD+ A N+LL +I DFGLA+ + + A +P
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 410 IEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESG 468
++ ++APE + ++DV++FGVLL EI + G P + + + + L E
Sbjct: 264 LK----WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLKEG- 317
Query: 469 NLTELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELL 515
T + P +Y T +M++ +L C + RP+ SE++E L
Sbjct: 318 --TRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHL 355
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 33/212 (15%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGH--VCHPNTATLVG 311
+G+G Y EV+ G G K+AVK + + ++ H + A + G
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKG 103
Query: 312 CCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGC-----K 366
LYLI ++ +NG+L L +S +L+ K+ GL +LH K
Sbjct: 104 TGSWTQLYLITDYHENGSLYDYL---KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGK 160
Query: 367 RRIIHRDIKASNVLLGPDFEPQITDFGLA-KWLPNKCTHHAAIPIE---GTFGYLAPEYF 422
I HRD+K+ N+L+ + I D GLA K++ + T+ IP GT Y+ PE
Sbjct: 161 PAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISD--TNEVDIPPNTRVGTKRYMPPE-- 216
Query: 423 MHGIIDEK-----------TDVFAFGVLLLEI 443
++DE D+++FG++L E+
Sbjct: 217 ---VLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 12/208 (5%)
Query: 246 NNFHSENMVGQGGYSEV-YKGNLSDGRKIAVKRLXXXXXXXXXXXXF-LMELGIIGHVCH 303
N+F ++G+G + +V + GR A+K L + E ++ + H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 304 PN-TATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLH 362
P TA + L + ++ G L L ER + E Y + L YLH
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA--EIVSALEYLH 122
Query: 363 KGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAK-WLPNKCTHHAAIPIEGTFGYLAPEY 421
R +++RDIK N++L D +ITDFGL K + + T GT YLAPE
Sbjct: 123 S---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC---GTPEYLAPEV 176
Query: 422 FMHGIIDEKTDVFAFGVLLLEIITGRKP 449
D + GV++ E++ GR P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 85/167 (50%), Gaps = 23/167 (13%)
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTH----HAAIP 409
VA+G+ +L R+ IHRD+ A N+LL +I DFGLA+ + + A +P
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 410 IEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESG 468
++ ++APE + ++DV++FGVLL EI + G P + + + + L E
Sbjct: 259 LK----WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLKEG- 312
Query: 469 NLTELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELL 515
T + P +Y T +M++ +L C + RP+ SE++E L
Sbjct: 313 --TRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHL 350
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 103/237 (43%), Gaps = 19/237 (8%)
Query: 294 ELGIIGHVCHPNTATLVGCCIENG---LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
E+ I+ + H + GCC + G L L+ + G+L L S L + +
Sbjct: 66 EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-PRHSIGLAQLLLF-- 122
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ G+ YLH + IHR++ A NVLL D +I DFGLAK +P ++
Sbjct: 123 AQQICEGMAYLHS---QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRED 179
Query: 411 -EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQ------NLVLWAKP 463
+ + APE +DV++FGV L E++T DSS+ L+ A+
Sbjct: 180 GDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTH---CDSSQSPPTKFLELIGIAQG 236
Query: 464 LMESGNLTELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELLTSGHD 520
M LTEL++ + + C +++RP+ ++ +L + H+
Sbjct: 237 QMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHE 293
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 80/181 (44%), Gaps = 11/181 (6%)
Query: 270 GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC-CIENGLYLIFNFSQNG 328
GR++AVK + E+ I+ H N + + L+++ F Q G
Sbjct: 70 GRQVAVKMMDLRKQQRREL--LFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGG 127
Query: 329 NLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQ 388
L + R + + VL + L YLH + +IHRDIK+ ++LL D +
Sbjct: 128 ALTDIVSQVRLNEEQIATVCEAVL---QALAYLHA---QGVIHRDIKSDSILLTLDGRVK 181
Query: 389 ITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRK 448
++DFG + + GT ++APE + + D+++ G++++E++ G
Sbjct: 182 LSDFGFCAQISKDVPKRKXLV--GTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEP 239
Query: 449 P 449
P
Sbjct: 240 P 240
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 107/257 (41%), Gaps = 32/257 (12%)
Query: 235 CFSYEEISSATNNFHSENMVGQGGYSEVY----KGNLSDG--RKIAVKRLXXXXXXXXXX 288
F +E A +GQG + VY KG + D ++A+K +
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 64
Query: 289 XXFLMELGIIGHV-CHPNTATLVGCCIENGLYL-IFNFSQNGNLDAALHDERSKSLEWPI 346
FL E ++ CH + L+G + L I G+L + L R + P+
Sbjct: 65 E-FLNEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 122
Query: 347 --------RYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL 398
++ +A G+ YL+ + +HRD+ A N ++ DF +I DFG+ + +
Sbjct: 123 LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 179
Query: 399 PNKCTHHAA----IPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSS 453
+ +P+ +++PE G+ +DV++FGV+L EI T +P
Sbjct: 180 YETDYYRKGGKGLLPVR----WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 235
Query: 454 RQNLVLWAKPLMESGNL 470
VL + +ME G L
Sbjct: 236 SNEQVL--RFVMEGGLL 250
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 106/239 (44%), Gaps = 23/239 (9%)
Query: 294 ELGIIGHVCHPNTATLVGCCIENG---LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
E+ I+ + H + GCC + G L L+ + G+L L S L + +
Sbjct: 66 EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-PRHSIGLAQLLLF-- 122
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ G+ YLH + IHR++ A NVLL D +I DFGLAK +P ++ +
Sbjct: 123 AQQICEGMAYLHA---QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY-RVRE 178
Query: 411 EG---TFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQ------NLVLWA 461
+G F Y APE +DV++FGV L E++T DSS+ L+ A
Sbjct: 179 DGDSPVFWY-APECLKEYKFYYASDVWSFGVTLYELLTH---CDSSQSPPTKFLELIGIA 234
Query: 462 KPLMESGNLTELVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLELLTSGHD 520
+ M LTEL++ + + C +++RP+ ++ +L + H+
Sbjct: 235 QGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHE 293
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 103/238 (43%), Gaps = 32/238 (13%)
Query: 254 VGQGGYSEVY----KGNLSDG--RKIAVKRLXXXXXXXXXXXXFLMELGIIGHV-CHPNT 306
+GQG + VY KG + D ++A+K + FL E ++ CH +
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLNEASVMKEFNCH-HV 90
Query: 307 ATLVGCCIENGLYL-IFNFSQNGNLDAALHDERSKSLEWPI--------RYKIVLGVARG 357
L+G + L I G+L + L R + P+ ++ +A G
Sbjct: 91 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 150
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAA----IPIEGT 413
+ YL+ + +HRD+ A N ++ DF +I DFG+ + + + +P+
Sbjct: 151 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-- 205
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNL 470
+++PE G+ +DV++FGV+L EI T +P VL + +ME G L
Sbjct: 206 --WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL--RFVMEGGLL 259
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 103/238 (43%), Gaps = 32/238 (13%)
Query: 254 VGQGGYSEVY----KGNLSDG--RKIAVKRLXXXXXXXXXXXXFLMELGIIGHV-CHPNT 306
+GQG + VY KG + D ++A+K + FL E ++ CH +
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLNEASVMKEFNCH-HV 77
Query: 307 ATLVGCCIENGLYL-IFNFSQNGNLDAALHDERSKSLEWPI--------RYKIVLGVARG 357
L+G + L I G+L + L R + P+ ++ +A G
Sbjct: 78 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAA----IPIEGT 413
+ YL+ + +HRD+ A N ++ DF +I DFG+ + + + +P+
Sbjct: 138 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-- 192
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNL 470
+++PE G+ +DV++FGV+L EI T +P VL + +ME G L
Sbjct: 193 --WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL--RFVMEGGLL 246
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 89/187 (47%), Gaps = 21/187 (11%)
Query: 292 LMELGIIGHVC-HPNTATLVGCCIENGLY-LIFNFSQNGNLDAALHDERSKSLEWPIRYK 349
L E+ I+ V HPN L N + L+F+ + G L L ++ + S E R K
Sbjct: 58 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLS-EKETR-K 115
Query: 350 IVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL-PNKCTHHAAI 408
I+ + + LHK I+HRD+K N+LL D ++TDFG + L P +
Sbjct: 116 IMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVC- 171
Query: 409 PIEGTFGYLAPEYFMHGIID------EKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAK 462
GT YLAPE + D ++ D+++ GV++ ++ G P +Q L+L
Sbjct: 172 ---GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML--- 225
Query: 463 PLMESGN 469
++ SGN
Sbjct: 226 RMIMSGN 232
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 102/238 (42%), Gaps = 32/238 (13%)
Query: 254 VGQGGYSEVY----KGNLSDG--RKIAVKRLXXXXXXXXXXXXFLMELGIIGHV-CHPNT 306
+GQG + VY KG + D ++A+K + FL E ++ CH +
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLNEASVMKEFNCH-HV 90
Query: 307 ATLVGCCIENGLYL-IFNFSQNGNLDAALHDERSKSLEWPI--------RYKIVLGVARG 357
L+G + L I G+L + L R P+ ++ +A G
Sbjct: 91 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 150
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAA----IPIEGT 413
+ YL+ + +HRD+ A N ++ DF +I DFG+ + + + +P+
Sbjct: 151 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-- 205
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNL 470
+++PE G+ +DV++FGV+L EI T +P VL + +ME G L
Sbjct: 206 --WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL--RFVMEGGLL 259
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 102/238 (42%), Gaps = 32/238 (13%)
Query: 254 VGQGGYSEVY----KGNLSDG--RKIAVKRLXXXXXXXXXXXXFLMELGIIGHV-CHPNT 306
+GQG + VY KG + D ++A+K + FL E ++ CH +
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLNEASVMKEFNCH-HV 80
Query: 307 ATLVGCCIENGLYL-IFNFSQNGNLDAALHDERSKSLEWPI--------RYKIVLGVARG 357
L+G + L I G+L + L R P+ ++ +A G
Sbjct: 81 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 140
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAA----IPIEGT 413
+ YL+ + +HRD+ A N ++ DF +I DFG+ + + + +P+
Sbjct: 141 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-- 195
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNL 470
+++PE G+ +DV++FGV+L EI T +P VL + +ME G L
Sbjct: 196 --WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL--RFVMEGGLL 249
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 106/244 (43%), Gaps = 27/244 (11%)
Query: 214 SPLRKRNGSLSNKEKHQPLLTCFSY-EEISSATNNFHSENMVGQGGYSEVYK-GNLSDGR 271
SP + N + EK +P+ + Y EE+ AT+ +G+G + EV++ + G
Sbjct: 66 SPKTEDNEGVLLTEKLKPVD--YEYREEVHWATHQLR----LGRGSFGEVHRMEDKQTGF 119
Query: 272 KIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCIENGLYLIF-NFSQNGNL 330
+ AVK++ EL + P L G E IF + G+L
Sbjct: 120 QCAVKKVRLEVFRAE-------ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSL 172
Query: 331 DAALHDERSKSLEWPIRYKIVLGVA-RGLHYLHKGCKRRIIHRDIKASNVLLGPD-FEPQ 388
+ ++ + + Y LG A GL YLH RRI+H D+KA NVLL D
Sbjct: 173 GQLVKEQGCLPEDRALYY---LGQALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAA 226
Query: 389 ITDFGLAKWLPNKCTHHAAIP---IEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
+ DFG A L + + I GT ++APE + D K DV++ ++L ++
Sbjct: 227 LCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLN 286
Query: 446 GRKP 449
G P
Sbjct: 287 GCHP 290
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 103/238 (43%), Gaps = 32/238 (13%)
Query: 254 VGQGGYSEVY----KGNLSDG--RKIAVKRLXXXXXXXXXXXXFLMELGIIGHV-CHPNT 306
+GQG + VY KG + D ++A+K + FL E ++ CH +
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLNEASVMKEFNCH-HV 84
Query: 307 ATLVGCCIENGLYL-IFNFSQNGNLDAALHDERSKSLEWPI--------RYKIVLGVARG 357
L+G + L I G+L + L R + P+ ++ +A G
Sbjct: 85 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 144
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN----KCTHHAAIPIEGT 413
+ YL+ + +HRD+ A N ++ DF +I DFG+ + + + +P+
Sbjct: 145 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR-- 199
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNL 470
+++PE G+ +DV++FGV+L EI T +P VL + +ME G L
Sbjct: 200 --WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL--RFVMEGGLL 253
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 103/238 (43%), Gaps = 32/238 (13%)
Query: 254 VGQGGYSEVY----KGNLSDG--RKIAVKRLXXXXXXXXXXXXFLMELGIIGHV-CHPNT 306
+GQG + VY KG + D ++A+K + FL E ++ CH +
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLNEASVMKEFNCH-HV 84
Query: 307 ATLVGCCIENGLYL-IFNFSQNGNLDAALHDERSKSLEWPI--------RYKIVLGVARG 357
L+G + L I G+L + L R + P+ ++ +A G
Sbjct: 85 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 144
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAA----IPIEGT 413
+ YL+ + +HRD+ A N ++ DF +I DFG+ + + + +P+
Sbjct: 145 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-- 199
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNL 470
+++PE G+ +DV++FGV+L EI T +P VL + +ME G L
Sbjct: 200 --WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL--RFVMEGGLL 253
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 89/187 (47%), Gaps = 21/187 (11%)
Query: 292 LMELGIIGHVC-HPNTATLVGCCIENGLY-LIFNFSQNGNLDAALHDERSKSLEWPIRYK 349
L E+ I+ V HPN L N + L+F+ + G L L ++ + S E R K
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLS-EKETR-K 128
Query: 350 IVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL-PNKCTHHAAI 408
I+ + + LHK I+HRD+K N+LL D ++TDFG + L P +
Sbjct: 129 IMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVC- 184
Query: 409 PIEGTFGYLAPEYFMHGIID------EKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAK 462
GT YLAPE + D ++ D+++ GV++ ++ G P +Q L+L
Sbjct: 185 ---GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML--- 238
Query: 463 PLMESGN 469
++ SGN
Sbjct: 239 RMIMSGN 245
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 19/203 (9%)
Query: 252 NMVGQGGYSEVYKGN--LSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATL 309
+ +G+G Y+ VYKG L+D +A+K + + E+ ++ + H N TL
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTA-IREVSLLKDLKHANIVTL 65
Query: 310 VGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRR 368
E L L+F + + +L L D+ + + + RGL Y H+ ++
Sbjct: 66 HDIIHTEKSLTLVFEY-LDKDLKQYL-DDCGNIINMHNVKLFLFQLLRGLAYCHR---QK 120
Query: 369 IIHRDIKASNVLLGPDFEPQITDFGL--AKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGI 426
++HRD+K N+L+ E ++ DFGL AK +P K + + T Y P+ + G
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV----TLWYRPPDILL-GS 175
Query: 427 IDEKT--DVFAFGVLLLEIITGR 447
D T D++ G + E+ TGR
Sbjct: 176 TDYSTQIDMWGVGCIFYEMATGR 198
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 103/238 (43%), Gaps = 32/238 (13%)
Query: 254 VGQGGYSEVY----KGNLSDG--RKIAVKRLXXXXXXXXXXXXFLMELGIIGHV-CHPNT 306
+GQG + VY KG + D ++A+K + FL E ++ CH +
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLNEASVMKEFNCH-HV 83
Query: 307 ATLVGCCIENGLYL-IFNFSQNGNLDAALHDERSKSLEWPI--------RYKIVLGVARG 357
L+G + L I G+L + L R + P+ ++ +A G
Sbjct: 84 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 143
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAA----IPIEGT 413
+ YL+ + +HRD+ A N ++ DF +I DFG+ + + + +P+
Sbjct: 144 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-- 198
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNL 470
+++PE G+ +DV++FGV+L EI T +P VL + +ME G L
Sbjct: 199 --WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL--RFVMEGGLL 252
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 103/238 (43%), Gaps = 32/238 (13%)
Query: 254 VGQGGYSEVY----KGNLSDG--RKIAVKRLXXXXXXXXXXXXFLMELGIIGHV-CHPNT 306
+GQG + VY KG + D ++A+K + FL E ++ CH +
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLNEASVMKEFNCH-HV 83
Query: 307 ATLVGCCIENGLYL-IFNFSQNGNLDAALHDERSKSLEWPI--------RYKIVLGVARG 357
L+G + L I G+L + L R + P+ ++ +A G
Sbjct: 84 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 143
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAA----IPIEGT 413
+ YL+ + +HRD+ A N ++ DF +I DFG+ + + + +P+
Sbjct: 144 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-- 198
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNL 470
+++PE G+ +DV++FGV+L EI T +P VL + +ME G L
Sbjct: 199 --WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL--RFVMEGGLL 252
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 93/212 (43%), Gaps = 29/212 (13%)
Query: 254 VGQGGYSEVY----KGNLSDG--RKIAVKRLXXXXXXXXXXXXFLMELGIIGHV-CHPNT 306
+GQG + VY KG + D ++A+K + FL E ++ CH +
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLNEASVMKEFNCH-HV 75
Query: 307 ATLVGCCIENGLYL-IFNFSQNGNLDAALHDERSKSLEWPI--------RYKIVLGVARG 357
L+G + L I G+L + L R + P+ ++ +A G
Sbjct: 76 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 135
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN----KCTHHAAIPIEGT 413
+ YL+ + +HRD+ A N ++ DF +I DFG+ + + + +P+
Sbjct: 136 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR-- 190
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
+++PE G+ +DV++FGV+L EI T
Sbjct: 191 --WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 89/187 (47%), Gaps = 21/187 (11%)
Query: 292 LMELGIIGHVC-HPNTATLVGCCIENGLY-LIFNFSQNGNLDAALHDERSKSLEWPIRYK 349
L E+ I+ V HPN L N + L+F+ + G L L ++ + S E R K
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLS-EKETR-K 128
Query: 350 IVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL-PNKCTHHAAI 408
I+ + + LHK I+HRD+K N+LL D ++TDFG + L P +
Sbjct: 129 IMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVC- 184
Query: 409 PIEGTFGYLAPEYFMHGIID------EKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAK 462
GT YLAPE + D ++ D+++ GV++ ++ G P +Q L+L
Sbjct: 185 ---GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML--- 238
Query: 463 PLMESGN 469
++ SGN
Sbjct: 239 RMIMSGN 245
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 90/208 (43%), Gaps = 28/208 (13%)
Query: 253 MVGQGGYSEVY--KGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLV 310
++G G +SEV+ K L+ G+ A+K + E+ ++ + H N TL
Sbjct: 16 VLGSGAFSEVFLVKQRLT-GKLFALKCIKKSPAFRDSSLE--NEIAVLKKIKHENIVTLE 72
Query: 311 GCCIENG-LYLIFNFSQNGNL-----DAALHDERSKSLEWPIRYKIVLGVARGLHYLHKG 364
YL+ G L + ++ E+ SL ++ V + YLH+
Sbjct: 73 DIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL-------VIQQVLSAVKYLHEN 125
Query: 365 CKRRIIHRDIKASNVL-LGPDFEPQI--TDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEY 421
I+HRD+K N+L L P+ +I TDFGL+K N A GT GY+APE
Sbjct: 126 ---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTAC----GTPGYVAPEV 178
Query: 422 FMHGIIDEKTDVFAFGVLLLEIITGRKP 449
+ D ++ GV+ ++ G P
Sbjct: 179 LAQKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 102/225 (45%), Gaps = 20/225 (8%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
VG+G Y VYK DG+ L E+ ++ + HPN +L
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSA-CREIALLRELKHPNVISLQKVF 87
Query: 314 IENG---LYLIFNFSQNGNLDAALHDERSKSLEWPIRY------KIVLGVARGLHYLHKG 364
+ + ++L+F+++++ SK+ + P++ ++ + G+HYLH
Sbjct: 88 LSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN 147
Query: 365 CKRRIIHRDIKASNVLL---GPDF-EPQITDFGLAKWLPNKCTHHAAI-PIEGTFGYLAP 419
++HRD+K +N+L+ GP+ +I D G A+ + A + P+ TF Y AP
Sbjct: 148 W---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP 204
Query: 420 EYFMHGIIDEKT-DVFAFGVLLLEIITGRKPVDSSRQNLVLWAKP 463
E + K D++A G + E++T +P+ RQ + + P
Sbjct: 205 ELLLGARHYTKAIDIWAIGCIFAELLTS-EPIFHCRQEDIKTSNP 248
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 99/233 (42%), Gaps = 41/233 (17%)
Query: 247 NFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
++ ++G G + VY+ L D G +A+K++ EL I+ + H N
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR------ELQIMRKLDHCN 108
Query: 306 TATLVGCCIENG-------LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVL-GVARG 357
L +G L L+ ++ A H R+K I K+ + + R
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 168
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEP-QITDFGLAKWL----PNK---CTHHAAIP 409
L Y+H I HRDIK N+LL PD ++ DFG AK L PN C+ +
Sbjct: 169 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---- 221
Query: 410 IEGTFGYLAPEYFMHGIIDEKT--DVFAFGVLLLEIITGRK--PVDSSRQNLV 458
Y APE + G D + DV++ G +L E++ G+ P DS LV
Sbjct: 222 ------YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 267
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 103/238 (43%), Gaps = 32/238 (13%)
Query: 254 VGQGGYSEVY----KGNLSDG--RKIAVKRLXXXXXXXXXXXXFLMELGIIGHV-CHPNT 306
+GQG + VY KG + D ++A+K + FL E ++ CH +
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLNEASVMKEFNCH-HV 112
Query: 307 ATLVGCCIENGLYL-IFNFSQNGNLDAALHDERSKSLEWPI--------RYKIVLGVARG 357
L+G + L I G+L + L R + P+ ++ +A G
Sbjct: 113 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 172
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAA----IPIEGT 413
+ YL+ + +HRD+ A N ++ DF +I DFG+ + + + +P+
Sbjct: 173 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-- 227
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNL 470
+++PE G+ +DV++FGV+L EI T +P VL + +ME G L
Sbjct: 228 --WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL--RFVMEGGLL 281
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 7/158 (4%)
Query: 293 MELGIIGHVCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVL 352
+E+ I+ V H N ++ G + + LD +R L+ P+ I
Sbjct: 78 LEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFR 137
Query: 353 GVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEG 412
+ + YL + IIHRDIK N+++ DF ++ DFG A +L + G
Sbjct: 138 QLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFC---G 191
Query: 413 TFGYLAPEYFM-HGIIDEKTDVFAFGVLLLEIITGRKP 449
T Y APE M + + ++++ GV L ++ P
Sbjct: 192 TIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENP 229
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 99/233 (42%), Gaps = 41/233 (17%)
Query: 247 NFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
++ ++G G + VY+ L D G +A+K++ EL I+ + H N
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR------ELQIMRKLDHCN 108
Query: 306 TATLVGCCIENG-------LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVL-GVARG 357
L +G L L+ ++ A H R+K I K+ + + R
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 168
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEP-QITDFGLAKWL----PNK---CTHHAAIP 409
L Y+H I HRDIK N+LL PD ++ DFG AK L PN C+ +
Sbjct: 169 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---- 221
Query: 410 IEGTFGYLAPEYFMHGIIDEKT--DVFAFGVLLLEIITGRK--PVDSSRQNLV 458
Y APE + G D + DV++ G +L E++ G+ P DS LV
Sbjct: 222 ------YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 267
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 103/251 (41%), Gaps = 27/251 (10%)
Query: 207 FFTSILSSP---LRKRNGSLSNKEKHQPLLTCFSYEEIS-SATNNFHSENMVGQGGYSEV 262
+F I +P +RK+ G + L +Y E+ N HSE + S+
Sbjct: 15 YFQGIAINPGMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQF 74
Query: 263 YKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCIENG-LYLI 321
KG SD K K E+ ++ + HPN L + YL+
Sbjct: 75 DKGRYSDDNKNIEK----------FHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLV 124
Query: 322 FNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLL 381
F + G L + + R K E I+ + G+ YLHK I+HRDIK N+LL
Sbjct: 125 TEFYEGGELFEQIIN-RHKFDECDAA-NIMKQILSGICYLHK---HNIVHRDIKPENILL 179
Query: 382 GPD---FEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGV 438
+I DFGL+ + + GT Y+APE + +EK DV++ GV
Sbjct: 180 ENKNSLLNIKIVDFGLSSFFSKDYKLRDRL---GTAYYIAPE-VLKKKYNEKCDVWSCGV 235
Query: 439 LLLEIITGRKP 449
++ ++ G P
Sbjct: 236 IMYILLCGYPP 246
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 99/233 (42%), Gaps = 41/233 (17%)
Query: 247 NFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
++ ++G G + VY+ L D G +A+K++ EL I+ + H N
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR------ELQIMRKLDHCN 102
Query: 306 TATLVGCCIENG-------LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVL-GVARG 357
L +G L L+ ++ A H R+K I K+ + + R
Sbjct: 103 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 162
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEP-QITDFGLAKWL----PNK---CTHHAAIP 409
L Y+H I HRDIK N+LL PD ++ DFG AK L PN C+ +
Sbjct: 163 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---- 215
Query: 410 IEGTFGYLAPEYFMHGIIDEKT--DVFAFGVLLLEIITGRK--PVDSSRQNLV 458
Y APE + G D + DV++ G +L E++ G+ P DS LV
Sbjct: 216 ------YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 261
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 11/208 (5%)
Query: 246 NNFHSENMVGQGGYSEV-YKGNLSDGRKIAVKRLXXXXXXXXXXXXF-LMELGIIGHVCH 303
N F ++G+G + +V + GR A+K L L E ++ + H
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 304 PN-TATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLH 362
P TA + L + ++ G L L ER S + Y + L YLH
Sbjct: 68 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGA--EIVSALDYLH 125
Query: 363 KGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAK-WLPNKCTHHAAIPIEGTFGYLAPEY 421
++ +++RD+K N++L D +ITDFGL K + + T GT YLAPE
Sbjct: 126 --SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC---GTPEYLAPEV 180
Query: 422 FMHGIIDEKTDVFAFGVLLLEIITGRKP 449
D + GV++ E++ GR P
Sbjct: 181 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 99/233 (42%), Gaps = 41/233 (17%)
Query: 247 NFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
++ ++G G + VY+ L D G +A+K++ EL I+ + H N
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR------ELQIMRKLDHCN 110
Query: 306 TATLVGCCIENG-------LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVL-GVARG 357
L +G L L+ ++ A H R+K I K+ + + R
Sbjct: 111 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 170
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEP-QITDFGLAKWL----PNK---CTHHAAIP 409
L Y+H I HRDIK N+LL PD ++ DFG AK L PN C+ +
Sbjct: 171 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---- 223
Query: 410 IEGTFGYLAPEYFMHGIIDEKT--DVFAFGVLLLEIITGRK--PVDSSRQNLV 458
Y APE + G D + DV++ G +L E++ G+ P DS LV
Sbjct: 224 ------YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 269
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 11/208 (5%)
Query: 246 NNFHSENMVGQGGYSEV-YKGNLSDGRKIAVKRLXXXXXXXXXXXXF-LMELGIIGHVCH 303
N F ++G+G + +V + GR A+K L L E ++ + H
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 69
Query: 304 PN-TATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLH 362
P TA + L + ++ G L L ER S + Y + L YLH
Sbjct: 70 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGA--EIVSALDYLH 127
Query: 363 KGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAK-WLPNKCTHHAAIPIEGTFGYLAPEY 421
++ +++RD+K N++L D +ITDFGL K + + T GT YLAPE
Sbjct: 128 --SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC---GTPEYLAPEV 182
Query: 422 FMHGIIDEKTDVFAFGVLLLEIITGRKP 449
D + GV++ E++ GR P
Sbjct: 183 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 99/233 (42%), Gaps = 41/233 (17%)
Query: 247 NFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
++ ++G G + VY+ L D G +A+K++ EL I+ + H N
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR------ELQIMRKLDHCN 153
Query: 306 TATLVGCCIENG-------LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVL-GVARG 357
L +G L L+ ++ A H R+K I K+ + + R
Sbjct: 154 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 213
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEP-QITDFGLAKWL----PNK---CTHHAAIP 409
L Y+H I HRDIK N+LL PD ++ DFG AK L PN C+ +
Sbjct: 214 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---- 266
Query: 410 IEGTFGYLAPEYFMHGIIDEKT--DVFAFGVLLLEIITGRK--PVDSSRQNLV 458
Y APE + G D + DV++ G +L E++ G+ P DS LV
Sbjct: 267 ------YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 312
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 99/233 (42%), Gaps = 41/233 (17%)
Query: 247 NFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
++ ++G G + VY+ L D G +A+K++ EL I+ + H N
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR------ELQIMRKLDHCN 112
Query: 306 TATLVGCCIENG-------LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVL-GVARG 357
L +G L L+ ++ A H R+K I K+ + + R
Sbjct: 113 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 172
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEP-QITDFGLAKWL----PNK---CTHHAAIP 409
L Y+H I HRDIK N+LL PD ++ DFG AK L PN C+ +
Sbjct: 173 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---- 225
Query: 410 IEGTFGYLAPEYFMHGIIDEKT--DVFAFGVLLLEIITGRK--PVDSSRQNLV 458
Y APE + G D + DV++ G +L E++ G+ P DS LV
Sbjct: 226 ------YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 271
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 11/208 (5%)
Query: 246 NNFHSENMVGQGGYSEV-YKGNLSDGRKIAVKRLXXXXXXXXXXXXF-LMELGIIGHVCH 303
N F ++G+G + +V + GR A+K L L E ++ + H
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 68
Query: 304 PN-TATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLH 362
P TA + L + ++ G L L ER S + Y + L YLH
Sbjct: 69 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGA--EIVSALDYLH 126
Query: 363 KGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAK-WLPNKCTHHAAIPIEGTFGYLAPEY 421
++ +++RD+K N++L D +ITDFGL K + + T GT YLAPE
Sbjct: 127 --SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC---GTPEYLAPEV 181
Query: 422 FMHGIIDEKTDVFAFGVLLLEIITGRKP 449
D + GV++ E++ GR P
Sbjct: 182 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 105/244 (43%), Gaps = 27/244 (11%)
Query: 214 SPLRKRNGSLSNKEKHQPLLTCFSY-EEISSATNNFHSENMVGQGGYSEVYK-GNLSDGR 271
SP + N + EK +P+ + Y EE+ AT+ +G+G + EV++ + G
Sbjct: 47 SPKTEDNEGVLLTEKLKPVD--YEYREEVHWATHQLR----LGRGSFGEVHRMEDKQTGF 100
Query: 272 KIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCIENGLYLIF-NFSQNGNL 330
+ AVK++ EL + P L G E IF + G+L
Sbjct: 101 QCAVKKVRLEVFRAE-------ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSL 153
Query: 331 DAALHDERSKSLEWPIRYKIVLGVA-RGLHYLHKGCKRRIIHRDIKASNVLLGPD-FEPQ 388
+ ++ + + Y LG A GL YLH RRI+H D+KA NVLL D
Sbjct: 154 GQLVKEQGCLPEDRALYY---LGQALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAA 207
Query: 389 ITDFGLAKWLPNKCTHHAAIP---IEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
+ DFG A L + I GT ++APE + D K DV++ ++L ++
Sbjct: 208 LCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLN 267
Query: 446 GRKP 449
G P
Sbjct: 268 GCHP 271
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 109/261 (41%), Gaps = 34/261 (13%)
Query: 254 VGQGGYSEVYKGNL-SDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G+G V + S G+ +AVK++ E+ I+ H N +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNS 96
Query: 313 -CIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
+ + L+++ F + G L + R + + L V + L LH + +IH
Sbjct: 97 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI---AAVCLAVLQALSVLHA---QGVIH 150
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKT 431
RDIK+ ++LL D +++DFG + + + GT ++APE +
Sbjct: 151 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISRLPYGPEV 208
Query: 432 DVFAFGVLLLEIITGRKP---------VDSSRQNLVLWAKPLMESGNLTELVDPSLEGEY 482
D+++ G++++E++ G P + R NL K L + V PSL+G
Sbjct: 209 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHK-------VSPSLKGFL 261
Query: 483 DTDQMHRLVLIADYCVRQTSA 503
D +L+ D R T+A
Sbjct: 262 DR------LLVRDPAQRATAA 276
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 103/246 (41%), Gaps = 33/246 (13%)
Query: 268 SDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC-CIENGLYLIFNFSQ 326
S G+ +AVK++ E+ I+ H N + + + L+++ F +
Sbjct: 97 SSGKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE 154
Query: 327 NGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFE 386
G L + R + + L V + L LH + +IHRDIK+ ++LL D
Sbjct: 155 GGALTDIVTHTRMNEEQI---AAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGR 208
Query: 387 PQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITG 446
+++DFG + + + GT ++APE + D+++ G++++E++ G
Sbjct: 209 VKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 266
Query: 447 RKP---------VDSSRQNLVLWAKPLMESGNLTELVDPSLEGEYDTDQMHRLVLIADYC 497
P + R NL K L + V PSL+G D +L+ D
Sbjct: 267 EPPYFNEPPLKAMKMIRDNLPPRLKNLHK-------VSPSLKGFLDR------LLVRDPA 313
Query: 498 VRQTSA 503
R T+A
Sbjct: 314 QRATAA 319
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 81/199 (40%), Gaps = 20/199 (10%)
Query: 255 GQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCI 314
QG Y L R +A+K+L EL ++ V H N L+
Sbjct: 36 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFT 93
Query: 315 EN-------GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKR 367
+Y++ + NL + E + Y++++G+ +LH
Sbjct: 94 PQKSLEEFQDVYIVMEL-MDANLSQVIQMELDHERMSYLLYQMLVGIK----HLHSAG-- 146
Query: 368 RIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGII 427
IIHRD+K SN+++ D +I DFGLA+ T P T Y APE +
Sbjct: 147 -IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 428 DEKTDVFAFGVLLLEIITG 446
E D+++ G ++ E+I G
Sbjct: 203 KENVDIWSVGCIMGEMIKG 221
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 99/233 (42%), Gaps = 41/233 (17%)
Query: 247 NFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
++ ++G G + VY+ L D G +A+K++ EL I+ + H N
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR------ELQIMRKLDHCN 86
Query: 306 TATLVGCCIENG-------LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVL-GVARG 357
L +G L L+ ++ A H R+K I K+ + + R
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 146
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEP-QITDFGLAKWL----PNK---CTHHAAIP 409
L Y+H I HRDIK N+LL PD ++ DFG AK L PN C+ +
Sbjct: 147 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---- 199
Query: 410 IEGTFGYLAPEYFMHGIIDEKT--DVFAFGVLLLEIITGRK--PVDSSRQNLV 458
Y APE + G D + DV++ G +L E++ G+ P DS LV
Sbjct: 200 ------YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 245
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 99/233 (42%), Gaps = 41/233 (17%)
Query: 247 NFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
++ ++G G + VY+ L D G +A+K++ EL I+ + H N
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR------ELQIMRKLDHCN 79
Query: 306 TATLVGCCIENG-------LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVL-GVARG 357
L +G L L+ ++ A H R+K I K+ + + R
Sbjct: 80 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 139
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEP-QITDFGLAKWL----PNK---CTHHAAIP 409
L Y+H I HRDIK N+LL PD ++ DFG AK L PN C+ +
Sbjct: 140 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---- 192
Query: 410 IEGTFGYLAPEYFMHGIIDEKT--DVFAFGVLLLEIITGRK--PVDSSRQNLV 458
Y APE + G D + DV++ G +L E++ G+ P DS LV
Sbjct: 193 ------YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 238
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 109/261 (41%), Gaps = 34/261 (13%)
Query: 254 VGQGGYSEVYKGNL-SDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G+G V + S G+ +AVK++ E+ I+ H N +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNS 94
Query: 313 -CIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
+ + L+++ F + G L + R + + L V + L LH + +IH
Sbjct: 95 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI---AAVCLAVLQALSVLHA---QGVIH 148
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKT 431
RDIK+ ++LL D +++DFG + + + GT ++APE +
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISRLPYGPEV 206
Query: 432 DVFAFGVLLLEIITGRKP---------VDSSRQNLVLWAKPLMESGNLTELVDPSLEGEY 482
D+++ G++++E++ G P + R NL K L + V PSL+G
Sbjct: 207 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHK-------VSPSLKGFL 259
Query: 483 DTDQMHRLVLIADYCVRQTSA 503
D +L+ D R T+A
Sbjct: 260 DR------LLVRDPAQRATAA 274
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 86/202 (42%), Gaps = 14/202 (6%)
Query: 254 VGQGGYSEVYKGNLSDGRKI-AVKRLXXXX-XXXXXXXXFLMELGIIGHVCHPNTATL-V 310
+G+G + +V +D +K+ A+K + EL I+ + HP L
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 311 GCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRII 370
E ++++ + G+L H +++ + + + L YL +RII
Sbjct: 83 SFQDEEDMFMVVDLLLGGDL--RYHLQQNVHFKEETVKLFICELVMALDYLQN---QRII 137
Query: 371 HRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMH---GII 427
HRD+K N+LL ITDF +A LP + + GT Y+APE F
Sbjct: 138 HRDMKPDNILLDEHGHVHITDFNIAAMLPRET---QITTMAGTKPYMAPEMFSSRKGAGY 194
Query: 428 DEKTDVFAFGVLLLEIITGRKP 449
D ++ GV E++ GR+P
Sbjct: 195 SFAVDWWSLGVTAYELLRGRRP 216
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 99/233 (42%), Gaps = 41/233 (17%)
Query: 247 NFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
++ ++G G + VY+ L D G +A+K++ EL I+ + H N
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR------ELQIMRKLDHCN 87
Query: 306 TATLVGCCIENG-------LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVL-GVARG 357
L +G L L+ ++ A H R+K I K+ + + R
Sbjct: 88 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 147
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEP-QITDFGLAKWL----PNK---CTHHAAIP 409
L Y+H I HRDIK N+LL PD ++ DFG AK L PN C+ +
Sbjct: 148 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---- 200
Query: 410 IEGTFGYLAPEYFMHGIIDEKT--DVFAFGVLLLEIITGRK--PVDSSRQNLV 458
Y APE + G D + DV++ G +L E++ G+ P DS LV
Sbjct: 201 ------YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 246
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 99/233 (42%), Gaps = 41/233 (17%)
Query: 247 NFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
++ ++G G + VY+ L D G +A+K++ EL I+ + H N
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR------ELQIMRKLDHCN 93
Query: 306 TATLVGCCIENG-------LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVL-GVARG 357
L +G L L+ ++ A H R+K I K+ + + R
Sbjct: 94 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 153
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEP-QITDFGLAKWL----PNK---CTHHAAIP 409
L Y+H I HRDIK N+LL PD ++ DFG AK L PN C+ +
Sbjct: 154 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---- 206
Query: 410 IEGTFGYLAPEYFMHGIIDEKT--DVFAFGVLLLEIITGRK--PVDSSRQNLV 458
Y APE + G D + DV++ G +L E++ G+ P DS LV
Sbjct: 207 ------YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 252
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 83/206 (40%), Gaps = 22/206 (10%)
Query: 246 NNFHSENMVGQGGYSEVYK-GNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVC-H 303
+F + +G G Y EV+K + DGR AVKR L E+G V H
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQH 116
Query: 304 PNTATLVGCCI------ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARG 357
P CC+ E G L G + SL + +
Sbjct: 117 P-------CCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLA 169
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYL 417
L +LH + ++H D+K +N+ LGP ++ DFGL L T A EG Y+
Sbjct: 170 LAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGL---LVELGTAGAGEVQEGDPRYM 223
Query: 418 APEYFMHGIIDEKTDVFAFGVLLLEI 443
APE + G DVF+ G+ +LE+
Sbjct: 224 APE-LLQGSYGTAADVFSLGLTILEV 248
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 99/233 (42%), Gaps = 41/233 (17%)
Query: 247 NFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
++ ++G G + VY+ L D G +A+K++ EL I+ + H N
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR------ELQIMRKLDHCN 82
Query: 306 TATLVGCCIENG-------LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVL-GVARG 357
L +G L L+ ++ A H R+K I K+ + + R
Sbjct: 83 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 142
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEP-QITDFGLAKWL----PNK---CTHHAAIP 409
L Y+H I HRDIK N+LL PD ++ DFG AK L PN C+ +
Sbjct: 143 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---- 195
Query: 410 IEGTFGYLAPEYFMHGIIDEKT--DVFAFGVLLLEIITGRK--PVDSSRQNLV 458
Y APE + G D + DV++ G +L E++ G+ P DS LV
Sbjct: 196 ------YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 241
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 99/233 (42%), Gaps = 41/233 (17%)
Query: 247 NFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
++ ++G G + VY+ L D G +A+K++ EL I+ + H N
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR------ELQIMRKLDHCN 86
Query: 306 TATLVGCCIENG-------LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVL-GVARG 357
L +G L L+ ++ A H R+K I K+ + + R
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 146
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEP-QITDFGLAKWL----PNK---CTHHAAIP 409
L Y+H I HRDIK N+LL PD ++ DFG AK L PN C+ +
Sbjct: 147 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---- 199
Query: 410 IEGTFGYLAPEYFMHGIIDEKT--DVFAFGVLLLEIITGRK--PVDSSRQNLV 458
Y APE + G D + DV++ G +L E++ G+ P DS LV
Sbjct: 200 ------YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 245
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 102/238 (42%), Gaps = 32/238 (13%)
Query: 254 VGQGGYSEVY----KGNLSDG--RKIAVKRLXXXXXXXXXXXXFLMELGIIGHV-CHPNT 306
+GQG + VY KG + D ++A+K + FL E ++ CH +
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLNEASVMKEFNCH-HV 77
Query: 307 ATLVGCCIENGLYL-IFNFSQNGNLDAALHDERSKSLEWPI--------RYKIVLGVARG 357
L+G + L I G+L + L R + P+ ++ +A G
Sbjct: 78 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAA----IPIEGT 413
+ YL+ + +HRD+ A N + DF +I DFG+ + + + +P+
Sbjct: 138 MAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-- 192
Query: 414 FGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKPVDSSRQNLVLWAKPLMESGNL 470
+++PE G+ +DV++FGV+L EI T +P VL + +ME G L
Sbjct: 193 --WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL--RFVMEGGLL 246
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 88/214 (41%), Gaps = 16/214 (7%)
Query: 243 SATNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHV 301
S T+ + +G+G +S V + L G + A K + E I +
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 302 CHPNTATLVGCCIENGL-YLIFNFSQNGNL--DAALHDERSKSLEWPIRYKIVLGVARGL 358
H N L E G YL+F+ G L D + S++ +I+ V L
Sbjct: 61 KHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV---L 117
Query: 359 HYLHKGCKRRIIHRDIKASNVLLGPDFE---PQITDFGLAKWLPNKCTHHAAIPIEGTFG 415
H G ++HRD+K N+LL + ++ DFGLA + + A GT G
Sbjct: 118 HCHQMG----VVHRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPG 171
Query: 416 YLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YL+PE + D++A GV+L ++ G P
Sbjct: 172 YLSPEVLRKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 81/199 (40%), Gaps = 20/199 (10%)
Query: 255 GQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCI 314
QG Y L R +A+K+L EL ++ V H N L+
Sbjct: 38 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 95
Query: 315 EN-------GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKR 367
+Y++ + NL + E + Y+++ G+ +LH
Sbjct: 96 PQKSLEEFQDVYIVMEL-MDANLCQVIQMELDHERMSYLLYQMLCGIK----HLHSAG-- 148
Query: 368 RIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGII 427
IIHRD+K SN+++ D +I DFGLA+ T +P T Y APE +
Sbjct: 149 -IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMVPFVVTRYYRAPEVILGMGY 204
Query: 428 DEKTDVFAFGVLLLEIITG 446
E D+++ G ++ E+I G
Sbjct: 205 KENVDIWSVGCIMGEMIKG 223
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 99/233 (42%), Gaps = 41/233 (17%)
Query: 247 NFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
++ ++G G + VY+ L D G +A+K++ EL I+ + H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR------ELQIMRKLDHCN 74
Query: 306 TATLVGCCIENG-------LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVL-GVARG 357
L +G L L+ ++ A H R+K I K+ + + R
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEP-QITDFGLAKWL----PNK---CTHHAAIP 409
L Y+H I HRDIK N+LL PD ++ DFG AK L PN C+ +
Sbjct: 135 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---- 187
Query: 410 IEGTFGYLAPEYFMHGIIDEKT--DVFAFGVLLLEIITGRK--PVDSSRQNLV 458
Y APE + G D + DV++ G +L E++ G+ P DS LV
Sbjct: 188 ------YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 99/233 (42%), Gaps = 41/233 (17%)
Query: 247 NFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
++ ++G G + VY+ L D G +A+K++ EL I+ + H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR------ELQIMRKLDHCN 74
Query: 306 TATLVGCCIENG-------LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVL-GVARG 357
L +G L L+ ++ A H R+K I K+ + + R
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEP-QITDFGLAKWL----PNK---CTHHAAIP 409
L Y+H I HRDIK N+LL PD ++ DFG AK L PN C+ +
Sbjct: 135 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---- 187
Query: 410 IEGTFGYLAPEYFMHGIIDEKT--DVFAFGVLLLEIITGRK--PVDSSRQNLV 458
Y APE + G D + DV++ G +L E++ G+ P DS LV
Sbjct: 188 ------YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 99/233 (42%), Gaps = 41/233 (17%)
Query: 247 NFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
++ ++G G + VY+ L D G +A+K++ EL I+ + H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR------ELQIMRKLDHCN 74
Query: 306 TATLVGCCIENG-------LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVL-GVARG 357
L +G L L+ ++ A H R+K I K+ + + R
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEP-QITDFGLAKWL----PNK---CTHHAAIP 409
L Y+H I HRDIK N+LL PD ++ DFG AK L PN C+ +
Sbjct: 135 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---- 187
Query: 410 IEGTFGYLAPEYFMHGIIDEKT--DVFAFGVLLLEIITGRK--PVDSSRQNLV 458
Y APE + G D + DV++ G +L E++ G+ P DS LV
Sbjct: 188 ------YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 99/233 (42%), Gaps = 41/233 (17%)
Query: 247 NFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
++ ++G G + VY+ L D G +A+K++ EL I+ + H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR------ELQIMRKLDHCN 74
Query: 306 TATLVGCCIENG-------LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVL-GVARG 357
L +G L L+ ++ A H R+K I K+ + + R
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEP-QITDFGLAKWL----PNK---CTHHAAIP 409
L Y+H I HRDIK N+LL PD ++ DFG AK L PN C+ +
Sbjct: 135 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---- 187
Query: 410 IEGTFGYLAPEYFMHGIIDEKT--DVFAFGVLLLEIITGRK--PVDSSRQNLV 458
Y APE + G D + DV++ G +L E++ G+ P DS LV
Sbjct: 188 ------YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 109/261 (41%), Gaps = 34/261 (13%)
Query: 254 VGQGGYSEVYKGNL-SDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G+G V + S G+ +AVK++ E+ I+ H N +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNS 85
Query: 313 -CIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
+ + L+++ F + G L + R + + L V + L LH + +IH
Sbjct: 86 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI---AAVCLAVLQALSVLHA---QGVIH 139
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKT 431
RDIK+ ++LL D +++DFG + + + GT ++APE +
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISRLPYGPEV 197
Query: 432 DVFAFGVLLLEIITGRKP---------VDSSRQNLVLWAKPLMESGNLTELVDPSLEGEY 482
D+++ G++++E++ G P + R NL K L + V PSL+G
Sbjct: 198 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHK-------VSPSLKGFL 250
Query: 483 DTDQMHRLVLIADYCVRQTSA 503
D +L+ D R T+A
Sbjct: 251 DR------LLVRDPAQRATAA 265
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 99/233 (42%), Gaps = 41/233 (17%)
Query: 247 NFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
++ ++G G + VY+ L D G +A+K++ EL I+ + H N
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR------ELQIMRKLDHCN 75
Query: 306 TATLVGCCIENG-------LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVL-GVARG 357
L +G L L+ ++ A H R+K I K+ + + R
Sbjct: 76 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 135
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEP-QITDFGLAKWL----PNK---CTHHAAIP 409
L Y+H I HRDIK N+LL PD ++ DFG AK L PN C+ +
Sbjct: 136 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---- 188
Query: 410 IEGTFGYLAPEYFMHGIIDEKT--DVFAFGVLLLEIITGRK--PVDSSRQNLV 458
Y APE + G D + DV++ G +L E++ G+ P DS LV
Sbjct: 189 ------YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 234
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 109/261 (41%), Gaps = 34/261 (13%)
Query: 254 VGQGGYSEVYKGNL-SDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G+G V + S G+ +AVK++ E+ I+ H N +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNS 89
Query: 313 -CIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
+ + L+++ F + G L + R + + L V + L LH + +IH
Sbjct: 90 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI---AAVCLAVLQALSVLHA---QGVIH 143
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKT 431
RDIK+ ++LL D +++DFG + + + GT ++APE +
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISRLPYGPEV 201
Query: 432 DVFAFGVLLLEIITGRKP---------VDSSRQNLVLWAKPLMESGNLTELVDPSLEGEY 482
D+++ G++++E++ G P + R NL K L + V PSL+G
Sbjct: 202 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHK-------VSPSLKGFL 254
Query: 483 DTDQMHRLVLIADYCVRQTSA 503
D +L+ D R T+A
Sbjct: 255 DR------LLVRDPAQRATAA 269
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 99/233 (42%), Gaps = 41/233 (17%)
Query: 247 NFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
++ ++G G + VY+ L D G +A+K++ EL I+ + H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR------ELQIMRKLDHCN 74
Query: 306 TATLVGCCIENG-------LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVL-GVARG 357
L +G L L+ ++ A H R+K I K+ + + R
Sbjct: 75 IVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEP-QITDFGLAKWL----PNK---CTHHAAIP 409
L Y+H I HRDIK N+LL PD ++ DFG AK L PN C+ +
Sbjct: 135 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---- 187
Query: 410 IEGTFGYLAPEYFMHGIIDEKT--DVFAFGVLLLEIITGRK--PVDSSRQNLV 458
Y APE + G D + DV++ G +L E++ G+ P DS LV
Sbjct: 188 ------YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 99/233 (42%), Gaps = 41/233 (17%)
Query: 247 NFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
++ ++G G + VY+ L D G +A+K++ EL I+ + H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR------ELQIMRKLDHCN 74
Query: 306 TATLVGCCIENG-------LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVL-GVARG 357
L +G L L+ ++ A H R+K I K+ + + R
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEP-QITDFGLAKWL----PNK---CTHHAAIP 409
L Y+H I HRDIK N+LL PD ++ DFG AK L PN C+ +
Sbjct: 135 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---- 187
Query: 410 IEGTFGYLAPEYFMHGIIDEKT--DVFAFGVLLLEIITGRK--PVDSSRQNLV 458
Y APE + G D + DV++ G +L E++ G+ P DS LV
Sbjct: 188 ------YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 89/221 (40%), Gaps = 21/221 (9%)
Query: 255 GQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCI 314
QG Y L R +A+K+L EL ++ V H N +L+
Sbjct: 36 AQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFT 93
Query: 315 EN-------GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKR 367
+YL+ + NL + E + Y+++ G+ +LH
Sbjct: 94 PQKTLEEFQDVYLVMEL-MDANLXQVIQMELDHERMSYLLYQMLXGIK----HLHSAG-- 146
Query: 368 RIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGII 427
IIHRD+K SN+++ D +I DFGLA+ T P T Y APE +
Sbjct: 147 -IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 428 DEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESG 468
E D+++ G ++ E++ K + R + W K + + G
Sbjct: 203 KENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNKVIEQLG 242
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 14/202 (6%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G+G Y V+K N +A+KR+ L E+ ++ + H N L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 313 C-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
+ L L+F F D + L+ I + + +GL + H R ++H
Sbjct: 70 LHSDKKLTLVFEFCDQDL--KKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS---RNVLH 124
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAPE-YFMHGIID 428
RD+K N+L+ + E ++ DFGLA+ +P +C + T Y P+ F +
Sbjct: 125 RDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV----TLWYRPPDVLFGAKLYS 180
Query: 429 EKTDVFAFGVLLLEIITGRKPV 450
D+++ G + E+ +P+
Sbjct: 181 TSIDMWSAGCIFAELANAARPL 202
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 99/233 (42%), Gaps = 41/233 (17%)
Query: 247 NFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
++ ++G G + VY+ L D G +A+K++ EL I+ + H N
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR------ELQIMRKLDHCN 78
Query: 306 TATLVGCCIENG-------LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVL-GVARG 357
L +G L L+ ++ A H R+K I K+ + + R
Sbjct: 79 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 138
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEP-QITDFGLAKWL----PNK---CTHHAAIP 409
L Y+H I HRDIK N+LL PD ++ DFG AK L PN C+ +
Sbjct: 139 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---- 191
Query: 410 IEGTFGYLAPEYFMHGIIDEKT--DVFAFGVLLLEIITGRK--PVDSSRQNLV 458
Y APE + G D + DV++ G +L E++ G+ P DS LV
Sbjct: 192 ------YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 237
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 18/174 (10%)
Query: 294 ELGIIGHVCHPNTATLVGCCIENGLYLIFNFSQNGNL-DAALHDERSKSLEWPIR-YKIV 351
E+ I+ + HP + Y++ + G L D + ++R K + Y+++
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 124
Query: 352 LGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEP---QITDFGLAKWLPNKCTHHAAI 408
L V YLH+ IIHRD+K NVLL E +ITDFG +K L
Sbjct: 125 LAV----QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-- 175
Query: 409 PIEGTFGYLAPEYFMH---GIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVL 459
+ GT YLAPE + + D ++ GV+L ++G P R + L
Sbjct: 176 -LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL 228
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 89/221 (40%), Gaps = 21/221 (9%)
Query: 255 GQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCI 314
QG Y L R +A+K+L EL ++ V H N +L+
Sbjct: 36 AQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFT 93
Query: 315 EN-------GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKR 367
+YL+ + NL + E + Y+++ G+ +LH
Sbjct: 94 PQKTLEEFQDVYLVMEL-MDANLXQVIQMELDHERMSYLLYQMLCGIK----HLHSAG-- 146
Query: 368 RIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGII 427
IIHRD+K SN+++ D +I DFGLA+ T P T Y APE +
Sbjct: 147 -IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 428 DEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESG 468
E D+++ G ++ E++ K + R + W K + + G
Sbjct: 203 KENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNKVIEQLG 242
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 18/174 (10%)
Query: 294 ELGIIGHVCHPNTATLVGCCIENGLYLIFNFSQNGNL-DAALHDERSKSLEWPIR-YKIV 351
E+ I+ + HP + Y++ + G L D + ++R K + Y+++
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 124
Query: 352 LGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEP---QITDFGLAKWLPNKCTHHAAI 408
L V YLH+ IIHRD+K NVLL E +ITDFG +K L
Sbjct: 125 LAV----QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-- 175
Query: 409 PIEGTFGYLAPEYFMH---GIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVL 459
+ GT YLAPE + + D ++ GV+L ++G P R + L
Sbjct: 176 -LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL 228
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 18/174 (10%)
Query: 294 ELGIIGHVCHPNTATLVGCCIENGLYLIFNFSQNGNL-DAALHDERSKSLEWPIR-YKIV 351
E+ I+ + HP + Y++ + G L D + ++R K + Y+++
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 124
Query: 352 LGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEP---QITDFGLAKWLPNKCTHHAAI 408
L V YLH+ IIHRD+K NVLL E +ITDFG +K L
Sbjct: 125 LAV----QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-- 175
Query: 409 PIEGTFGYLAPEYFMH---GIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVL 459
+ GT YLAPE + + D ++ GV+L ++G P R + L
Sbjct: 176 -LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL 228
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 99/233 (42%), Gaps = 41/233 (17%)
Query: 247 NFHSENMVGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPN 305
++ ++G G + VY+ L D G +A+K++ EL I+ + H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR------ELQIMRKLDHCN 74
Query: 306 TATLVGCCIENG-------LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVL-GVARG 357
L +G L L+ ++ A H R+K I K+ + + R
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGPDFEP-QITDFGLAKWL----PNK---CTHHAAIP 409
L Y+H I HRDIK N+LL PD ++ DFG AK L PN C+ +
Sbjct: 135 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---- 187
Query: 410 IEGTFGYLAPEYFMHGIIDEKT--DVFAFGVLLLEIITGRK--PVDSSRQNLV 458
Y APE + G D + DV++ G +L E++ G+ P DS LV
Sbjct: 188 ------YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 18/174 (10%)
Query: 294 ELGIIGHVCHPNTATLVGCCIENGLYLIFNFSQNGNL-DAALHDERSKSLEWPIR-YKIV 351
E+ I+ + HP + Y++ + G L D + ++R K + Y+++
Sbjct: 64 EIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 123
Query: 352 LGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEP---QITDFGLAKWLPNKCTHHAAI 408
L V YLH+ IIHRD+K NVLL E +ITDFG +K L
Sbjct: 124 LAV----QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-- 174
Query: 409 PIEGTFGYLAPEYFMH---GIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVL 459
+ GT YLAPE + + D ++ GV+L ++G P R + L
Sbjct: 175 -LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL 227
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 87/203 (42%), Gaps = 20/203 (9%)
Query: 254 VGQGGYSEVYK-GNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG+G + EV++ + G + AVK++ + EL + P L G
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-------VEELVACAGLSSPRIVPLYGA 118
Query: 313 CIENGLYLIF-NFSQNGNLDAALHDERSKSLEWPIRYKIVLGVA-RGLHYLHKGCKRRII 370
E IF + G+L + + + Y LG A GL YLH RRI+
Sbjct: 119 VREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYY---LGQALEGLEYLHT---RRIL 172
Query: 371 HRDIKASNVLLGPD-FEPQITDFGLAKWLPNKCTHHAAIP---IEGTFGYLAPEYFMHGI 426
H D+KA NVLL D + DFG A L + + I GT ++APE M
Sbjct: 173 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 232
Query: 427 IDEKTDVFAFGVLLLEIITGRKP 449
D K D+++ ++L ++ G P
Sbjct: 233 CDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 89/214 (41%), Gaps = 16/214 (7%)
Query: 243 SATNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHV 301
S T+ + +G+G +S V + + G++ A K + E I +
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 302 CHPNTATLVGCCIENGL-YLIFNFSQNGNL--DAALHDERSKSLEWPIRYKIVLGVARGL 358
HPN L E G YL+F+ G L D + S++ + + +
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEA----DASHCIQQILESV 116
Query: 359 HYLHKGCKRRIIHRDIKASNVLLGPDFE---PQITDFGLAKWLPNKCTHHAAIPIEGTFG 415
++ H I+HRD+K N+LL + ++ DFGLA + + A GT G
Sbjct: 117 NHCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPG 171
Query: 416 YLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YL+PE + D++A GV+L ++ G P
Sbjct: 172 YLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 90/212 (42%), Gaps = 17/212 (8%)
Query: 245 TNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCH 303
++N+ + +G+G +S V + + + G + A K + E I + H
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 304 PNTATLVGCCIENGL-YLIFNFSQNGNL--DAALHDERSKSLEWPIRYKIVLGVARGLHY 360
PN L E YL+F+ G L D + S++ +I+ +A Y
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA----Y 143
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFE---PQITDFGLAKWLPNKCTHHAAIPIEGTFGYL 417
H I+HR++K N+LL + ++ DFGLA + + H GT GYL
Sbjct: 144 CHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG---FAGTPGYL 197
Query: 418 APEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
+PE + D++A GV+L ++ G P
Sbjct: 198 SPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 87/203 (42%), Gaps = 20/203 (9%)
Query: 254 VGQGGYSEVYK-GNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
VG+G + EV++ + G + AVK++ + EL + P L G
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-------VEELVACAGLSSPRIVPLYGA 134
Query: 313 CIENGLYLIF-NFSQNGNLDAALHDERSKSLEWPIRYKIVLGVA-RGLHYLHKGCKRRII 370
E IF + G+L + + + Y LG A GL YLH RRI+
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYY---LGQALEGLEYLHT---RRIL 188
Query: 371 HRDIKASNVLLGPD-FEPQITDFGLAKWLPNKCTHHAAIP---IEGTFGYLAPEYFMHGI 426
H D+KA NVLL D + DFG A L + + I GT ++APE M
Sbjct: 189 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 248
Query: 427 IDEKTDVFAFGVLLLEIITGRKP 449
D K D+++ ++L ++ G P
Sbjct: 249 CDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 91/232 (39%), Gaps = 45/232 (19%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHP 304
+F +G+GG+ V++ N D A+KR+ + E+ + + HP
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKV-MREVKALAKLEHP 63
Query: 305 NTATLVGCCIENG-------------LYLIFNFSQNGNLDAALH-----DERSKSLEWPI 346
+E LY+ + NL ++ +ER +S +
Sbjct: 64 GIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERS----V 119
Query: 347 RYKIVLGVARGLHYLH-KGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWL------- 398
I L +A + +LH KG ++HRD+K SN+ D ++ DFGL +
Sbjct: 120 CLHIFLQIAEAVEFLHSKG----LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 175
Query: 399 ------PNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEII 444
P H + GT Y++PE K D+F+ G++L E++
Sbjct: 176 TVLTPMPAYARHTGQV---GTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 18/174 (10%)
Query: 294 ELGIIGHVCHPNTATLVGCCIENGLYLIFNFSQNGNL-DAALHDERSKSLEWPIR-YKIV 351
E+ I+ + HP + Y++ + G L D + ++R K + Y+++
Sbjct: 71 EIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 130
Query: 352 LGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEP---QITDFGLAKWLPNKCTHHAAI 408
L V YLH+ IIHRD+K NVLL E +ITDFG +K L
Sbjct: 131 LAV----QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-- 181
Query: 409 PIEGTFGYLAPEYFMH---GIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVL 459
+ GT YLAPE + + D ++ GV+L ++G P R + L
Sbjct: 182 -LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL 234
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 73/172 (42%), Gaps = 20/172 (11%)
Query: 240 EISSATNNFHSENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXF-------- 291
E+ + + + + + G Y V G S+G +A+KR+
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 292 -LMELGIIGHVCHPNTATLVGCCIE------NGLYLIFNFSQNGNLDAALHDERSKSLEW 344
L E+ ++ H HPN L + + LYL+ + +L +HD+R
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQ 134
Query: 345 PIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAK 396
I+Y + + GLH LH+ ++HRD+ N+LL + + I DF LA+
Sbjct: 135 HIQY-FMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAR 182
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 103/254 (40%), Gaps = 21/254 (8%)
Query: 207 FFTSILSSPLRKRNGSLSNKEKHQPLLTCFSYEEISSATNNFHSENMVGQGGYSEVYKGN 266
+T S LR+ E +P +E+ +F ++G+G + EV
Sbjct: 37 LYTECSHSALRRDKYVAEFLEWAKPFTQLV--KEMQLHREDFEIIKVIGRGAFGEVAVVK 94
Query: 267 LSDGRKI-AVKRLXXXXXXXXXXXXFLMELG--IIGHVCHPNTATLVGCCIENGLYLIFN 323
+ + +I A+K L E ++ C TA EN LYL+ +
Sbjct: 95 MKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMD 154
Query: 324 FSQNGNLDAALHDERSKSLEWPIRYKI---VLGVARGLHYLHKGCKRRIIHRDIKASNVL 380
+ G+L L K E R+ I VL + +H LH +HRDIK NVL
Sbjct: 155 YYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAID-SIHQLH------YVHRDIKPDNVL 207
Query: 381 LGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFM-----HGIIDEKTDVFA 435
L + ++ DFG + + T +++ + GT Y++PE G + D ++
Sbjct: 208 LDVNGHIRLADFGSCLKMNDDGTVQSSVAV-GTPDYISPEILQAMEDGMGKYGPECDWWS 266
Query: 436 FGVLLLEIITGRKP 449
GV + E++ G P
Sbjct: 267 LGVCMYEMLYGETP 280
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 19/222 (8%)
Query: 239 EEISSATNNFHSENMVGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLMELG- 296
+E+ +F ++G+G + EV + + +I A+K L E
Sbjct: 83 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 142
Query: 297 -IIGHVCHPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI---VL 352
++ C TA EN LYL+ ++ G+L L K E R+ I VL
Sbjct: 143 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVL 202
Query: 353 GVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEG 412
+ +H LH +HRDIK NVLL + ++ DFG + + T +++ + G
Sbjct: 203 AID-SIHQLH------YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV-G 254
Query: 413 TFGYLAPEYFM-----HGIIDEKTDVFAFGVLLLEIITGRKP 449
T Y++PE G + D ++ GV + E++ G P
Sbjct: 255 TPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 73/172 (42%), Gaps = 20/172 (11%)
Query: 240 EISSATNNFHSENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXF-------- 291
E+ + + + + + G Y V G S+G +A+KR+
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 292 -LMELGIIGHVCHPNTATLVGCCIE------NGLYLIFNFSQNGNLDAALHDERSKSLEW 344
L E+ ++ H HPN L + + LYL+ + +L +HD+R
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQ 134
Query: 345 PIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAK 396
I+Y + + GLH LH+ ++HRD+ N+LL + + I DF LA+
Sbjct: 135 HIQY-FMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAR 182
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 80/199 (40%), Gaps = 20/199 (10%)
Query: 255 GQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCI 314
QG Y L R +A+K+L EL ++ V H N L+
Sbjct: 36 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFT 93
Query: 315 EN-------GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKR 367
+Y++ + NL + E + Y+++ G+ +LH
Sbjct: 94 PQKSLEEFQDVYIVMEL-MDANLSQVIQMELDHERMSYLLYQMLCGIK----HLHSAG-- 146
Query: 368 RIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGII 427
IIHRD+K SN+++ D +I DFGLA+ T P T Y APE +
Sbjct: 147 -IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 428 DEKTDVFAFGVLLLEIITG 446
E D+++ G ++ E+I G
Sbjct: 203 KENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 80/199 (40%), Gaps = 20/199 (10%)
Query: 255 GQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCI 314
QG Y L R +A+K+L EL ++ V H N L+
Sbjct: 36 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 93
Query: 315 EN-------GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKR 367
+Y++ + NL + E + Y+++ G+ +LH
Sbjct: 94 PQKSLEEFQDVYIVMEL-MDANLSQVIQMELDHERMSYLLYQMLCGIK----HLHSAG-- 146
Query: 368 RIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGII 427
IIHRD+K SN+++ D +I DFGLA+ T P T Y APE +
Sbjct: 147 -IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 428 DEKTDVFAFGVLLLEIITG 446
E D+++ G ++ E+I G
Sbjct: 203 KENVDIWSVGCIMGEMIKG 221
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 96/230 (41%), Gaps = 27/230 (11%)
Query: 245 TNNFHSENMVGQGGYSEVYKGNLSDGRK-IAVKRLXXXXXXXXXXXXFLMELGIIGHVCH 303
++ F E+ +G+G S VY+ +K A+K L E+G++ + H
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRT----EIGVLLRLSH 107
Query: 304 PNTATLVGCC-IENGLYLIFNFSQNGNL-----DAALHDERSKSLEWPIRYKIVLGVARG 357
PN L + L+ G L + + ER + V +
Sbjct: 108 PNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAA-------DAVKQILEA 160
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLG---PDFEPQITDFGLAKWLPNKCTHHAAIPIEGTF 414
+ YLH+ I+HRD+K N+L PD +I DFGL+K + ++ + GT
Sbjct: 161 VAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT---VCGTP 214
Query: 415 GYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPL 464
GY APE + D+++ G++ ++ G +P R + ++ + L
Sbjct: 215 GYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRIL 264
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 97/227 (42%), Gaps = 22/227 (9%)
Query: 230 QPLLTCFSYEEISSATNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXX 288
Q + TC + T+++ +G+G +S V + + ++ A K +
Sbjct: 21 QXMATCTRF------TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDH 74
Query: 289 XXFLMELGIIGHVCHPNTATLVGCCIENGL-YLIFNFSQNGNL--DAALHDERSKSLEWP 345
E I + HPN L E G YL+F+ G L D + S++
Sbjct: 75 QKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH 134
Query: 346 IRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFE---PQITDFGLAKWLPNKC 402
++I+ V +++H+ I+HRD+K N+LL + ++ DFGLA + +
Sbjct: 135 CIHQILESV----NHIHQ---HDIVHRDLKPENLLLASKCKGAAVKLADFGLA--IEVQG 185
Query: 403 THHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
A GT GYL+PE + D++A GV+L ++ G P
Sbjct: 186 EQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 80/199 (40%), Gaps = 20/199 (10%)
Query: 255 GQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCI 314
QG Y L R +A+K+L EL ++ V H N L+
Sbjct: 36 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 93
Query: 315 EN-------GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKR 367
+Y++ + NL + E + Y+++ G+ +LH
Sbjct: 94 PQKSLEEFQDVYIVMEL-MDANLSQVIQMELDHERMSYLLYQMLCGIK----HLHSAG-- 146
Query: 368 RIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGII 427
IIHRD+K SN+++ D +I DFGLA+ T P T Y APE +
Sbjct: 147 -IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 428 DEKTDVFAFGVLLLEIITG 446
E D+++ G ++ E+I G
Sbjct: 203 KENVDIWSVGCIMGEMIKG 221
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 93/222 (41%), Gaps = 22/222 (9%)
Query: 241 ISSATNNFHSENM------VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLM 293
+ T N + ++M +G+G +S V + + G++ A K +
Sbjct: 11 VDLGTENLYFQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLER 70
Query: 294 ELGIIGHVCHPNTATLVGCCIENGL-YLIFNFSQNGNL--DAALHDERSKSLEWPIRYKI 350
E I + HPN L E G YLIF+ G L D + S++ +I
Sbjct: 71 EARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQI 130
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFE---PQITDFGLAKWLPNKCTHHAA 407
+ V LH G ++HRD+K N+LL + ++ DFGLA + + A
Sbjct: 131 LEAV---LHCHQMG----VVHRDLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAW 181
Query: 408 IPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
GT GYL+PE + D++A GV+L ++ G P
Sbjct: 182 FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 223
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 89/221 (40%), Gaps = 21/221 (9%)
Query: 255 GQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCI 314
QG Y L R +A+K+L EL ++ V H N +L+
Sbjct: 36 AQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 93
Query: 315 EN-------GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKR 367
+YL+ + NL + E + Y+++ G+ +LH
Sbjct: 94 PQKTLEEFQDVYLVMEL-MDANLXQVIQMELDHERMSYLLYQMLXGIK----HLHSAG-- 146
Query: 368 RIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGII 427
IIHRD+K SN+++ D +I DFGLA+ T P T Y APE +
Sbjct: 147 -IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 428 DEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESG 468
E D+++ G ++ E++ K + R + W K + + G
Sbjct: 203 KENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNKVIEQLG 242
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 89/214 (41%), Gaps = 16/214 (7%)
Query: 243 SATNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHV 301
S T+ + +G+G +S V + + G++ A K + E I +
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 302 CHPNTATLVGCCIENGL-YLIFNFSQNGNL--DAALHDERSKSLEWPIRYKIVLGVARGL 358
HPN L E G YL+F+ G L D + S++ + + +
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEA----DASHCIQQILESV 116
Query: 359 HYLHKGCKRRIIHRDIKASNVLLGPDFE---PQITDFGLAKWLPNKCTHHAAIPIEGTFG 415
++ H I+HRD+K N+LL + ++ DFGLA + + A GT G
Sbjct: 117 NHCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPG 171
Query: 416 YLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YL+PE + D++A GV+L ++ G P
Sbjct: 172 YLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 90/212 (42%), Gaps = 17/212 (8%)
Query: 245 TNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCH 303
++N+ + +G+G +S V + + + G + A K + E I + H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 304 PNTATLVGCCIENGL-YLIFNFSQNGNL--DAALHDERSKSLEWPIRYKIVLGVARGLHY 360
PN L E YL+F+ G L D + S++ +I+ +A Y
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA----Y 120
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFE---PQITDFGLAKWLPNKCTHHAAIPIEGTFGYL 417
H I+HR++K N+LL + ++ DFGLA + + H GT GYL
Sbjct: 121 CHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG---FAGTPGYL 174
Query: 418 APEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
+PE + D++A GV+L ++ G P
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 90/212 (42%), Gaps = 17/212 (8%)
Query: 245 TNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCH 303
++N+ + +G+G +S V + + + G + A K + E I + H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 304 PNTATLVGCCIENGL-YLIFNFSQNGNL--DAALHDERSKSLEWPIRYKIVLGVARGLHY 360
PN L E YL+F+ G L D + S++ +I+ +A Y
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA----Y 120
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFE---PQITDFGLAKWLPNKCTHHAAIPIEGTFGYL 417
H I+HR++K N+LL + ++ DFGLA + + H GT GYL
Sbjct: 121 CHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG---FAGTPGYL 174
Query: 418 APEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
+PE + D++A GV+L ++ G P
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 357 GLHYLHKGCKRRIIHRDIKASNVLLGPD-FEPQITDFGLAKWLPNKCTHHAAIP---IEG 412
GL YLH RRI+H D+KA NVLL D + DFG A L + + I G
Sbjct: 176 GLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 232
Query: 413 TFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
T ++APE M D K D+++ ++L ++ G P
Sbjct: 233 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 17/115 (14%)
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTH----HAAIP 409
VA+G+ +L + IHRD+ A N+LL +I DFGLA+ + N + +A +P
Sbjct: 177 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLP 233
Query: 410 IEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT------GRKPVDSSRQNLV 458
++ ++APE + + ++DV+++G+ L E+ + PVDS ++
Sbjct: 234 VK----WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 284
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 97/231 (41%), Gaps = 41/231 (17%)
Query: 245 TNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGH--V 301
++F ++GQG + +V K N D R A+K++ +M L + H V
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYV 64
Query: 302 CHPNTATL---------VGCCIENGLYLIFNFSQNGNLDAALHDE---RSKSLEWPIRYK 349
A L ++ L++ + +NG L +H E + + W + +
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQ 124
Query: 350 IVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAK------------- 396
I+ L Y+H + IIHRD+K N+ + +I DFGLAK
Sbjct: 125 IL----EALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 397 -WLPNKCTH-HAAIPIEGTFGYLAPEYF-MHGIIDEKTDVFAFGVLLLEII 444
LP + +AI GT Y+A E G +EK D+++ G++ E+I
Sbjct: 178 QNLPGSSDNLTSAI---GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 34/221 (15%)
Query: 254 VGQGGYSEVYKG---NL---SDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTA 307
+G+G + +V+ NL D +AVK L F E ++ + H +
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQD--FQREAELLTMLQHQHIV 106
Query: 308 TLVGCCIEN-GLYLIFNFSQNGNLDAAL--HDERSKSLEW-------PIRYKIVLGVAR- 356
G C E L ++F + ++G+L+ L H +K L P+ +L VA
Sbjct: 107 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166
Query: 357 ---GLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN----KCTHHAAIP 409
G+ YL +HRD+ N L+G +I DFG+++ + + + +P
Sbjct: 167 VAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 223
Query: 410 IEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKP 449
I ++ PE ++ ++DV++FGV+L EI T G++P
Sbjct: 224 IR----WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 89/221 (40%), Gaps = 21/221 (9%)
Query: 255 GQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCI 314
QG Y L R +A+K+L EL ++ V H N +L+
Sbjct: 36 AQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFT 93
Query: 315 EN-------GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKR 367
+YL+ + NL + E + Y+++ G+ +LH
Sbjct: 94 PQKTLEEFQDVYLVMEL-MDANLCQVIQMELDHERMSYLLYQMLCGIK----HLHSAG-- 146
Query: 368 RIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGII 427
IIHRD+K SN+++ D +I DFGLA+ T P T Y APE +
Sbjct: 147 -IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 428 DEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESG 468
E D+++ G ++ E++ K + R + W K + + G
Sbjct: 203 KENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNKVIEQLG 242
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 89/221 (40%), Gaps = 21/221 (9%)
Query: 255 GQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCI 314
QG Y L R +A+K+L EL ++ V H N +L+
Sbjct: 29 AQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 86
Query: 315 EN-------GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKR 367
+YL+ + NL + E + Y+++ G+ +LH
Sbjct: 87 PQKTLEEFQDVYLVMEL-MDANLXQVIQMELDHERMSYLLYQMLXGIK----HLHSAG-- 139
Query: 368 RIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGII 427
IIHRD+K SN+++ D +I DFGLA+ T P T Y APE +
Sbjct: 140 -IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 195
Query: 428 DEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESG 468
E D+++ G ++ E++ K + R + W K + + G
Sbjct: 196 KENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNKVIEQLG 235
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 18/174 (10%)
Query: 294 ELGIIGHVCHPNTATLVGCCIENGLYLIFNFSQNGNL-DAALHDERSKSLEWPIR-YKIV 351
E+ I+ + HP + Y++ + G L D + ++R K + Y+++
Sbjct: 190 EIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 249
Query: 352 LGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEP---QITDFGLAKWLPNKCTHHAAI 408
L V YLH+ IIHRD+K NVLL E +ITDFG +K L
Sbjct: 250 LAV----QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-- 300
Query: 409 PIEGTFGYLAPEYFMH---GIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVL 459
+ GT YLAPE + + D ++ GV+L ++G P R + L
Sbjct: 301 -LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL 353
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 18/174 (10%)
Query: 294 ELGIIGHVCHPNTATLVGCCIENGLYLIFNFSQNGNL-DAALHDERSKSLEWPIR-YKIV 351
E+ I+ + HP + Y++ + G L D + ++R K + Y+++
Sbjct: 204 EIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 263
Query: 352 LGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEP---QITDFGLAKWLPNKCTHHAAI 408
L V YLH+ IIHRD+K NVLL E +ITDFG +K L
Sbjct: 264 LAV----QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-- 314
Query: 409 PIEGTFGYLAPEYFMH---GIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVL 459
+ GT YLAPE + + D ++ GV+L ++G P R + L
Sbjct: 315 -LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL 367
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 90/212 (42%), Gaps = 17/212 (8%)
Query: 245 TNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCH 303
++N+ + +G+G +S V + + + G + A K + E I + H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 304 PNTATLVGCCIENGL-YLIFNFSQNGNL--DAALHDERSKSLEWPIRYKIVLGVARGLHY 360
PN L E YL+F+ G L D + S++ +I+ +A Y
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA----Y 119
Query: 361 LHKGCKRRIIHRDIKASNVLLGPDFE---PQITDFGLAKWLPNKCTHHAAIPIEGTFGYL 417
H I+HR++K N+LL + ++ DFGLA + + H GT GYL
Sbjct: 120 CHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG---FAGTPGYL 173
Query: 418 APEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
+PE + D++A GV+L ++ G P
Sbjct: 174 SPEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 66/159 (41%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G + + H R P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFY 146
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ Q+TDFG AK + + A P
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTP- 202
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 203 ----EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 34/221 (15%)
Query: 254 VGQGGYSEVYKG---NL---SDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTA 307
+G+G + +V+ NL D +AVK L F E ++ + H +
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQD--FQREAELLTMLQHQHIV 83
Query: 308 TLVGCCIEN-GLYLIFNFSQNGNLDAAL--HDERSKSLEW-------PIRYKIVLGVAR- 356
G C E L ++F + ++G+L+ L H +K L P+ +L VA
Sbjct: 84 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 143
Query: 357 ---GLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN----KCTHHAAIP 409
G+ YL +HRD+ N L+G +I DFG+++ + + + +P
Sbjct: 144 VAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 200
Query: 410 IEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKP 449
I ++ PE ++ ++DV++FGV+L EI T G++P
Sbjct: 201 IR----WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 34/221 (15%)
Query: 254 VGQGGYSEVYKG---NL---SDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTA 307
+G+G + +V+ NL D +AVK L F E ++ + H +
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQD--FQREAELLTMLQHQHIV 77
Query: 308 TLVGCCIEN-GLYLIFNFSQNGNLDAAL--HDERSKSLEW-------PIRYKIVLGVAR- 356
G C E L ++F + ++G+L+ L H +K L P+ +L VA
Sbjct: 78 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 137
Query: 357 ---GLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPN----KCTHHAAIP 409
G+ YL +HRD+ N L+G +I DFG+++ + + + +P
Sbjct: 138 VAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 194
Query: 410 IEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT-GRKP 449
I ++ PE ++ ++DV++FGV+L EI T G++P
Sbjct: 195 IR----WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 17/115 (14%)
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTH----HAAIP 409
VA+G+ +L + IHRD+ A N+LL +I DFGLA+ + N + +A +P
Sbjct: 170 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 226
Query: 410 IEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT------GRKPVDSSRQNLV 458
++ ++APE + + ++DV+++G+ L E+ + PVDS ++
Sbjct: 227 VK----WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 277
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 89/221 (40%), Gaps = 21/221 (9%)
Query: 255 GQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCI 314
QG Y L R +A+K+L EL ++ V H N +L+
Sbjct: 74 AQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 131
Query: 315 EN-------GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKR 367
+YL+ + NL + E + Y+++ G+ +LH
Sbjct: 132 PQKTLEEFQDVYLVMEL-MDANLCQVIQMELDHERMSYLLYQMLCGIK----HLHSA--- 183
Query: 368 RIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGII 427
IIHRD+K SN+++ D +I DFGLA+ T P T Y APE +
Sbjct: 184 GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 240
Query: 428 DEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESG 468
E D+++ G ++ E++ K + R + W K + + G
Sbjct: 241 KENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNKVIEQLG 280
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 17/115 (14%)
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTH----HAAIP 409
VA+G+ +L + IHRD+ A N+LL +I DFGLA+ + N + +A +P
Sbjct: 154 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 210
Query: 410 IEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT------GRKPVDSSRQNLV 458
++ ++APE + + ++DV+++G+ L E+ + PVDS ++
Sbjct: 211 VK----WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 261
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 17/115 (14%)
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTH----HAAIP 409
VA+G+ +L + IHRD+ A N+LL +I DFGLA+ + N + +A +P
Sbjct: 172 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 228
Query: 410 IEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT------GRKPVDSSRQNLV 458
++ ++APE + + ++DV+++G+ L E+ + PVDS ++
Sbjct: 229 VK----WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 279
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 17/115 (14%)
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTH----HAAIP 409
VA+G+ +L + IHRD+ A N+LL +I DFGLA+ + N + +A +P
Sbjct: 177 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 233
Query: 410 IEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT------GRKPVDSSRQNLV 458
++ ++APE + + ++DV+++G+ L E+ + PVDS ++
Sbjct: 234 VK----WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 284
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 80/199 (40%), Gaps = 20/199 (10%)
Query: 255 GQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCI 314
QG Y L R +A+K+L EL ++ V H N L+
Sbjct: 36 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 93
Query: 315 EN-------GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKR 367
+Y++ + NL + E + Y+++ G+ +LH
Sbjct: 94 PQKSLEEFQDVYIVMEL-MDANLCQVIQMELDHERMSYLLYQMLCGIK----HLHSAG-- 146
Query: 368 RIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGII 427
IIHRD+K SN+++ D +I DFGLA+ T P T Y APE +
Sbjct: 147 -IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 428 DEKTDVFAFGVLLLEIITG 446
E D+++ G ++ E+I G
Sbjct: 203 KENVDIWSVGCIMGEMIKG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 80/199 (40%), Gaps = 20/199 (10%)
Query: 255 GQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCI 314
QG Y L R +A+K+L EL ++ V H N L+
Sbjct: 36 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 93
Query: 315 EN-------GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKR 367
+Y++ + NL + E + Y+++ G+ +LH
Sbjct: 94 PQKSLEEFQDVYIVMEL-MDANLCQVIQMELDHERMSYLLYQMLCGIK----HLHSAG-- 146
Query: 368 RIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGII 427
IIHRD+K SN+++ D +I DFGLA+ T P T Y APE +
Sbjct: 147 -IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 428 DEKTDVFAFGVLLLEIITG 446
E D+++ G ++ E+I G
Sbjct: 203 KENVDIWSVGCIMGEMIKG 221
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 330 LDAALHDERSKSLEWPIRYKIVLGVAR----GLHYLHKGCKRRIIHRDIKASNVLLGPD- 384
++ ++H R +SL++ R K++ + R LHYLH + I HRDIK N L +
Sbjct: 150 INGSIHGFR-ESLDFVQREKLISNIMRQIFSALHYLHN---QGICHRDIKPENFLFSTNK 205
Query: 385 -FEPQITDFGLAK--WLPNKCTHHAAIPIEGTFGYLAPEYF--MHGIIDEKTDVFAFGVL 439
FE ++ DFGL+K + N ++ GT ++APE + K D ++ GVL
Sbjct: 206 SFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVL 265
Query: 440 LLEIITGRKPV----DSSRQNLVLWAKPLMESGNLTEL 473
L ++ G P D+ + VL K E+ N L
Sbjct: 266 LHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVL 303
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 80/199 (40%), Gaps = 20/199 (10%)
Query: 255 GQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCI 314
QG Y L R +A+K+L EL ++ V H N L+
Sbjct: 37 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 94
Query: 315 EN-------GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKR 367
+Y++ + NL + E + Y+++ G+ +LH
Sbjct: 95 PQKSLEEFQDVYIVMEL-MDANLCQVIQMELDHERMSYLLYQMLCGIK----HLHSAG-- 147
Query: 368 RIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGII 427
IIHRD+K SN+++ D +I DFGLA+ T P T Y APE +
Sbjct: 148 -IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 203
Query: 428 DEKTDVFAFGVLLLEIITG 446
E D+++ G ++ E+I G
Sbjct: 204 KENVDIWSVGCIMGEMIKG 222
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 89/221 (40%), Gaps = 21/221 (9%)
Query: 255 GQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCI 314
QG Y L R +A+K+L EL ++ V H N +L+
Sbjct: 36 AQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 93
Query: 315 EN-------GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKR 367
+YL+ + NL + E + Y+++ G+ +LH
Sbjct: 94 PQKTLEEFQDVYLVMEL-MDANLCQVIQMELDHERMSYLLYQMLCGIK----HLHSAG-- 146
Query: 368 RIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGII 427
IIHRD+K SN+++ D +I DFGLA+ T P T Y APE +
Sbjct: 147 -IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 428 DEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESG 468
E D+++ G ++ E++ K + R + W K + + G
Sbjct: 203 KENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNKVIEQLG 242
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 89/221 (40%), Gaps = 21/221 (9%)
Query: 255 GQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCI 314
QG Y L R +A+K+L EL ++ V H N +L+
Sbjct: 37 AQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 94
Query: 315 EN-------GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKR 367
+YL+ + NL + E + Y+++ G+ +LH
Sbjct: 95 PQKTLEEFQDVYLVMEL-MDANLCQVIQMELDHERMSYLLYQMLCGIK----HLHSAG-- 147
Query: 368 RIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGII 427
IIHRD+K SN+++ D +I DFGLA+ T P T Y APE +
Sbjct: 148 -IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 203
Query: 428 DEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESG 468
E D+++ G ++ E++ K + R + W K + + G
Sbjct: 204 KENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNKVIEQLG 243
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 89/221 (40%), Gaps = 21/221 (9%)
Query: 255 GQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCI 314
QG Y L R +A+K+L EL ++ V H N +L+
Sbjct: 36 AQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 93
Query: 315 EN-------GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKR 367
+YL+ + NL + E + Y+++ G+ +LH
Sbjct: 94 PQKTLEEFQDVYLVMEL-MDANLCQVIQMELDHERMSYLLYQMLCGIK----HLHSAG-- 146
Query: 368 RIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGII 427
IIHRD+K SN+++ D +I DFGLA+ T P T Y APE +
Sbjct: 147 -IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 428 DEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESG 468
E D+++ G ++ E++ K + R + W K + + G
Sbjct: 203 KENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNKVIEQLG 242
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 67/159 (42%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G + + H R P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFY 146
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ Q+TDFG AK + + +
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-----L 198
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
GT YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 199 XGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 89/221 (40%), Gaps = 21/221 (9%)
Query: 255 GQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCI 314
QG Y L R +A+K+L EL ++ V H N +L+
Sbjct: 37 AQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 94
Query: 315 EN-------GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKR 367
+YL+ + NL + E + Y+++ G+ +LH
Sbjct: 95 PQKTLEEFQDVYLVMEL-MDANLCQVIQMELDHERMSYLLYQMLCGIK----HLHSAG-- 147
Query: 368 RIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGII 427
IIHRD+K SN+++ D +I DFGLA+ T P T Y APE +
Sbjct: 148 -IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 203
Query: 428 DEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESG 468
E D+++ G ++ E++ K + R + W K + + G
Sbjct: 204 KENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNKVIEQLG 243
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 89/221 (40%), Gaps = 21/221 (9%)
Query: 255 GQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCI 314
QG Y L R +A+K+L EL ++ V H N +L+
Sbjct: 35 AQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 92
Query: 315 EN-------GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKR 367
+YL+ + NL + E + Y+++ G+ +LH
Sbjct: 93 PQKTLEEFQDVYLVMEL-MDANLCQVIQMELDHERMSYLLYQMLCGIK----HLHSAG-- 145
Query: 368 RIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGII 427
IIHRD+K SN+++ D +I DFGLA+ T P T Y APE +
Sbjct: 146 -IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 201
Query: 428 DEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESG 468
E D+++ G ++ E++ K + R + W K + + G
Sbjct: 202 KENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNKVIEQLG 241
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 89/221 (40%), Gaps = 21/221 (9%)
Query: 255 GQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCI 314
QG Y L R +A+K+L EL ++ V H N +L+
Sbjct: 74 AQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 131
Query: 315 EN-------GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKR 367
+YL+ + NL + E + Y+++ G+ +LH
Sbjct: 132 PQKTLEEFQDVYLVMEL-MDANLCQVIQMELDHERMSYLLYQMLCGIK----HLHSA--- 183
Query: 368 RIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGII 427
IIHRD+K SN+++ D +I DFGLA+ T P T Y APE +
Sbjct: 184 GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 240
Query: 428 DEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESG 468
E D+++ G ++ E++ K + R + W K + + G
Sbjct: 241 KENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNKVIEQLG 280
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 80/211 (37%), Gaps = 22/211 (10%)
Query: 248 FHSENMVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTA 307
F + +G G +SEV K+ + E+ ++ + H N
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 308 TLVGCCIE-NGLYLIFNFSQNGNL-----DAALHDERSKSLEWPIRYKIVLGVARGLHYL 361
L N LYL+ G L + + E+ S ++ V ++YL
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAST-------LIRQVLDAVYYL 136
Query: 362 HKGCKRRIIHRDIKASNVLLGPDFEPQ---ITDFGLAKWLPNKCTHHAAIPIEGTFGYLA 418
H+ I+HRD+K N+L E I+DFGL+K A GT GY+A
Sbjct: 137 HR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTAC---GTPGYVA 190
Query: 419 PEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
PE + D ++ GV+ ++ G P
Sbjct: 191 PEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 86/202 (42%), Gaps = 14/202 (6%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G+G Y V+K N +A+KR+ L E+ ++ + H N L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 313 C-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
+ L L+F F D + L+ I + + +GL + H R ++H
Sbjct: 70 LHSDKKLTLVFEFCDQDL--KKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS---RNVLH 124
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKW--LPNKCTHHAAIPIEGTFGYLAPE-YFMHGIID 428
RD+K N+L+ + E ++ +FGLA+ +P +C + T Y P+ F +
Sbjct: 125 RDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV----TLWYRPPDVLFGAKLYS 180
Query: 429 EKTDVFAFGVLLLEIITGRKPV 450
D+++ G + E+ +P+
Sbjct: 181 TSIDMWSAGCIFAELANAGRPL 202
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 69/159 (43%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ ++ G + + H R P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARFY 146
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+++ Q+TDFGLAK + + +
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWX-----L 198
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
GT YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 104/248 (41%), Gaps = 21/248 (8%)
Query: 213 SSPLRKRNGSLSNKEKHQPLLTCFSYEEISSATNNFHSENMVGQGGYSEVYKGNLSDGRK 272
+SPLR+ L E +P + +++ +F ++G+G + EV L + K
Sbjct: 43 NSPLRREKNILEYLEWAKPFTS--KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADK 100
Query: 273 IAVKRLXXX--XXXXXXXXXFLMELGIIGHVCHPNTATL-VGCCIENGLYLIFNFSQNGN 329
+ ++ F E ++ + TL +N LYL+ ++ G+
Sbjct: 101 VFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGD 160
Query: 330 LDAALHDERSKSLEWPIRY---KIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFE 386
L L + E R+ ++V+ + +H LH +HRDIK N+L+ +
Sbjct: 161 LLTLLSKFEDRLPEEMARFYLAEMVIAID-SVHQLH------YVHRDIKPDNILMDMNGH 213
Query: 387 PQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFM-----HGIIDEKTDVFAFGVLLL 441
++ DFG L T +++ + GT Y++PE G + D ++ GV +
Sbjct: 214 IRLADFGSCLKLMEDGTVQSSVAV-GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMY 272
Query: 442 EIITGRKP 449
E++ G P
Sbjct: 273 EMLYGETP 280
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 84/191 (43%), Gaps = 19/191 (9%)
Query: 242 SSATNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGH 300
+++ + + +G+G Y EVYK + +A+KR+ + E+ ++
Sbjct: 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKE 89
Query: 301 VCHPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLH 359
+ H N L N L+LIF +++N D + +++ + + + + G++
Sbjct: 90 LQHRNIIELKSVIHHNHRLHLIFEYAEN---DLKKYMDKNPDVSMRVIKSFLYQLINGVN 146
Query: 360 YLHKGCKRRIIHRDIKASNVLLGPDFEPQ-----ITDFGLAKW--LPNKCTHHAAIPIEG 412
+ H RR +HRD+K N+LL + I DFGLA+ +P + H I
Sbjct: 147 FCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII---- 199
Query: 413 TFGYLAPEYFM 423
T Y PE +
Sbjct: 200 TLWYRPPEILL 210
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 89/221 (40%), Gaps = 21/221 (9%)
Query: 255 GQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCI 314
QG Y L R +A+K+L EL ++ V H N +L+
Sbjct: 30 AQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 87
Query: 315 EN-------GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKR 367
+YL+ + NL + E + Y+++ G+ +LH
Sbjct: 88 PQKTLEEFQDVYLVMEL-MDANLCQVIQMELDHERMSYLLYQMLCGIK----HLHSAG-- 140
Query: 368 RIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGII 427
IIHRD+K SN+++ D +I DFGLA+ T P T Y APE +
Sbjct: 141 -IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 196
Query: 428 DEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESG 468
E D+++ G ++ E++ K + R + W K + + G
Sbjct: 197 KENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNKVIEQLG 236
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 89/221 (40%), Gaps = 21/221 (9%)
Query: 255 GQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCI 314
QG Y L R +A+K+L EL ++ V H N +L+
Sbjct: 29 AQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 86
Query: 315 EN-------GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKR 367
+YL+ + NL + E + Y+++ G+ +LH
Sbjct: 87 PQKTLEEFQDVYLVMEL-MDANLCQVIQMELDHERMSYLLYQMLCGIK----HLHSAG-- 139
Query: 368 RIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGII 427
IIHRD+K SN+++ D +I DFGLA+ T P T Y APE +
Sbjct: 140 -IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 195
Query: 428 DEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESG 468
E D+++ G ++ E++ K + R + W K + + G
Sbjct: 196 KENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNKVIEQLG 235
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 10/196 (5%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G+G Y V+K N G+ +A+K+ L E+ ++ + HPN L+
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 313 CI-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
+ L+L+F + + L D + + + I + +++ HK IH
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHEL--DRYQRGVPEHLVKSITWQTLQAVNFCHK---HNCIH 125
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGI-IDEK 430
RD+K N+L+ ++ DFG A+ L ++ T Y +PE +
Sbjct: 126 RDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDD--EVATRWYRSPELLVGDTQYGPP 183
Query: 431 TDVFAFGVLLLEIITG 446
DV+A G + E+++G
Sbjct: 184 VDVWAIGCVFAELLSG 199
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 89/221 (40%), Gaps = 21/221 (9%)
Query: 255 GQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCI 314
QG Y L R +A+K+L EL ++ V H N +L+
Sbjct: 30 AQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 87
Query: 315 EN-------GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKR 367
+YL+ + NL + E + Y+++ G+ +LH
Sbjct: 88 PQKTLEEFQDVYLVMEL-MDANLCQVIQMELDHERMSYLLYQMLCGIK----HLHSAG-- 140
Query: 368 RIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGII 427
IIHRD+K SN+++ D +I DFGLA+ T P T Y APE +
Sbjct: 141 -IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 196
Query: 428 DEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESG 468
E D+++ G ++ E++ K + R + W K + + G
Sbjct: 197 KENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNKVIEQLG 236
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 80/199 (40%), Gaps = 20/199 (10%)
Query: 255 GQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCI 314
QG Y L R +A+K+L EL ++ V H N L+
Sbjct: 36 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 93
Query: 315 EN-------GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKR 367
+Y++ + NL + E + Y+++ G+ +LH
Sbjct: 94 PQKSLEEFQDVYIVMEL-MDANLCQVIQMELDHERMSYLLYQMLCGIK----HLHSAG-- 146
Query: 368 RIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGII 427
IIHRD+K SN+++ D +I DFGLA+ T P T Y APE +
Sbjct: 147 -IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPEVVTRYYRAPEVILGMGY 202
Query: 428 DEKTDVFAFGVLLLEIITG 446
E D+++ G ++ E+I G
Sbjct: 203 KENVDIWSVGCIMGEMIKG 221
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 67/159 (42%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G + + H R P
Sbjct: 110 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFY 167
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ Q+TDFG AK + A +
Sbjct: 168 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----ATWTL 219
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
GT YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 30/217 (13%)
Query: 245 TNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCH 303
++ + + +G G YSE + + + + AVK + L+ G H
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYG-----QH 80
Query: 304 PNTATLVGCCIENG--LYLIFNFSQNGNL-DAALHD----ERSKSLEWPIRYKIVLGVAR 356
PN TL ++G +YL+ + G L D L ER S ++ + +
Sbjct: 81 PNIITLKDV-YDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-------VLHTIGK 132
Query: 357 GLHYLHKGCKRRIIHRDIKASNVL-LGPDFEPQ---ITDFGLAKWLPNKCTHHAAIPIEG 412
+ YLH + ++HRD+K SN+L + P+ I DFG AK L + + +
Sbjct: 133 TVEYLHS---QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL--RAENGLLMTPCY 187
Query: 413 TFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
T ++APE DE D+++ G+LL ++ G P
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 30/217 (13%)
Query: 245 TNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCH 303
++ + + +G G YSE + + + + AVK + L+ G H
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYG-----QH 80
Query: 304 PNTATLVGCCIENG--LYLIFNFSQNGNL-DAALHD----ERSKSLEWPIRYKIVLGVAR 356
PN TL ++G +YL+ + G L D L ER S ++ + +
Sbjct: 81 PNIITLKDV-YDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-------VLHTIGK 132
Query: 357 GLHYLHKGCKRRIIHRDIKASNVL-LGPDFEPQ---ITDFGLAKWLPNKCTHHAAIPIEG 412
+ YLH + ++HRD+K SN+L + P+ I DFG AK L + + +
Sbjct: 133 TVEYLHS---QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL--RAENGLLMTPCY 187
Query: 413 TFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
T ++APE DE D+++ G+LL ++ G P
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 91/213 (42%), Gaps = 22/213 (10%)
Query: 245 TNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCH 303
T+ + + +G G YS + + + + AVK + L+ G H
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYG-----QH 75
Query: 304 PNTATLVGCCIENG--LYLIFNFSQNGNL-DAALHDERSKSLEWPIRYKIVLGVARGLHY 360
PN TL ++G +Y++ + G L D L R K ++ + + + Y
Sbjct: 76 PNIITLKDV-YDDGKYVYVVTELMKGGELLDKIL---RQKFFSEREASAVLFTITKTVEY 131
Query: 361 LHKGCKRRIIHRDIKASNVLL----GPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGY 416
LH + ++HRD+K SN+L G +I DFG AK L + + + T +
Sbjct: 132 LHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL--RAENGLLMTPCYTANF 186
Query: 417 LAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
+APE D D+++ GVLL ++TG P
Sbjct: 187 VAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G + + H R P
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFY 147
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ Q+TDFG AK + + P
Sbjct: 148 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTP- 203
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 204 ----EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G + + H R P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFY 146
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ Q+TDFG AK + + P
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTP- 202
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 203 ----EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G + + H R P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFY 146
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ Q+TDFG AK + + P
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTP- 202
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 203 ----EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G + + H R P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFY 146
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ Q+TDFG AK + + P
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTP- 202
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 203 ----EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G + + H R P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFY 146
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ Q+TDFG AK + + P
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTP- 202
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 203 ----EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G + + H R P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXEPHARFY 146
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ Q+TDFG AK + + P
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTP- 202
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 203 ----EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G + + H R P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFY 146
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ Q+TDFG AK + + P
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTP- 202
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 203 ----EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G + + H R P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXEPHARFY 146
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ Q+TDFG AK + + P
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTP- 202
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 203 ----EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G + + H R P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXEPHARFY 146
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ Q+TDFG AK + + P
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTP- 202
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 203 ----EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G + + H R P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFAEPHARFY 146
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ Q+TDFG AK + + P
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTP- 202
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 203 ----EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ ++ G + + H R P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARFY 146
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+++ Q+TDFG AK + + +
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWX-----L 198
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
GT YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G + + H R P
Sbjct: 110 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXEPHARFY 167
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ Q+TDFG AK + + P
Sbjct: 168 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTP- 223
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 224 ----EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G + + H R P
Sbjct: 84 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXEPHARFY 141
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ Q+TDFG AK + + P
Sbjct: 142 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTP- 197
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 198 ----EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G + + H R P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFY 146
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ Q+TDFG AK + + P
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTP- 202
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 203 ----EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 80/205 (39%), Gaps = 15/205 (7%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G+G Y EV N +AVK + E+ I + H N G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 313 CIENGL-YLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
E + YL + G L + E + P + + G+ YLH G I H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLH-GIG--ITH 127
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF----MHGII 427
RDIK N+LL +I+DFGLA + GT Y+APE H
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA-- 185
Query: 428 DEKTDVFAFGVLLLEIITGRKPVDS 452
E DV++ G++L ++ G P D
Sbjct: 186 -EPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 13/162 (8%)
Query: 294 ELGIIGHVCHPNTATLVGCCIE-NGLYLIFNFSQNGNLDAAL--HDERSKSLEWPIRYKI 350
E+ ++ + HPN + + + +Y++ + G L + R K+L ++
Sbjct: 70 EIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAEL 129
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLL---GPDFEPQITDFGLAKWLPNKCTHHAA 407
+ + L Y H + ++H+D+K N+L P +I DFGLA+ K H+
Sbjct: 130 MKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF--KSDEHST 184
Query: 408 IPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
GT Y+APE F + K D+++ GV++ ++TG P
Sbjct: 185 -NAAGTALYMAPEVFKRDVTF-KCDIWSAGVVMYFLLTGCLP 224
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G + + H R P
Sbjct: 76 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFY 133
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ Q+TDFG AK + + P
Sbjct: 134 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTP- 189
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 190 ----EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G + + H R P
Sbjct: 89 LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFY 146
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ Q+TDFG AK + + P
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTP- 202
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 203 ----EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 67/159 (42%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G + + H R P
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFY 147
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ Q+TDFG AK + + +
Sbjct: 148 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW-----TL 199
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
GT YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G + + H R P
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFY 147
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ Q+TDFG AK + + P
Sbjct: 148 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTP- 203
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 204 ----EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 80/205 (39%), Gaps = 15/205 (7%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G+G Y EV N +AVK + E+ I + H N G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 73
Query: 313 CIENGL-YLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
E + YL + G L + E + P + + G+ YLH G I H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLH-GIG--ITH 128
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF----MHGII 427
RDIK N+LL +I+DFGLA + GT Y+APE H
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA-- 186
Query: 428 DEKTDVFAFGVLLLEIITGRKPVDS 452
E DV++ G++L ++ G P D
Sbjct: 187 -EPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G + + H R P
Sbjct: 89 LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFY 146
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ Q+TDFG AK + + P
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTP- 202
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 203 ----EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G + + H R P
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFY 147
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ Q+TDFG AK + + P
Sbjct: 148 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTP- 203
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 204 ----EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 67/159 (42%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G + + H R P
Sbjct: 110 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFY 167
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ Q+TDFG AK + + +
Sbjct: 168 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-----L 219
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
GT YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G + + H R P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFY 146
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ Q+TDFG AK + + P
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTP- 202
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 203 ----EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G + + H R P
Sbjct: 89 LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFY 146
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ Q+TDFG AK + + P
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTP- 202
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 203 ----EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G + + H R P
Sbjct: 82 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFY 139
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ Q+TDFG AK + + P
Sbjct: 140 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTP- 195
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 196 ----EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 80/205 (39%), Gaps = 15/205 (7%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G+G Y EV N +AVK + E+ I + H N G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 313 CIENGL-YLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
E + YL + G L + E + P + + G+ YLH G I H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLH-GIG--ITH 127
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF----MHGII 427
RDIK N+LL +I+DFGLA + GT Y+APE H
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA-- 185
Query: 428 DEKTDVFAFGVLLLEIITGRKPVDS 452
E DV++ G++L ++ G P D
Sbjct: 186 -EPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 80/205 (39%), Gaps = 15/205 (7%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G+G Y EV N +AVK + E+ I + H N G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 313 CIENGL-YLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
E + YL + G L + E + P + + G+ YLH G I H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLH-GIG--ITH 127
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF----MHGII 427
RDIK N+LL +I+DFGLA + GT Y+APE H
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA-- 185
Query: 428 DEKTDVFAFGVLLLEIITGRKPVDS 452
E DV++ G++L ++ G P D
Sbjct: 186 -EPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G + + H R P
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFY 147
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ Q+TDFG AK + + P
Sbjct: 148 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTP- 203
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 204 ----EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 69/159 (43%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ ++ G + + H R P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARFY 146
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+++ ++TDFGLAK + + +
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWX-----L 198
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
GT YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 14/158 (8%)
Query: 294 ELGIIGHVCHPNTATLVGCCIENG---LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
E+ I+ + H + GCC + G + L+ + G+L L + +
Sbjct: 61 EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL---F 117
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ G+ YLH + IHR + A NVLL D +I DFGLAK +P ++ +
Sbjct: 118 AQQICEGMAYLHA---QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY-RVRE 173
Query: 411 EG---TFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
+G F Y APE +DV++FGV L E++T
Sbjct: 174 DGDSPVFWY-APECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G + + H R P
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFY 147
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ Q+TDFG AK + + P
Sbjct: 148 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTP- 203
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 204 ----EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G + + H R P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFY 146
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ Q+TDFG AK + + P
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTP- 202
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 203 ----EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 96/231 (41%), Gaps = 41/231 (17%)
Query: 245 TNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGH--V 301
++F ++GQG + +V K N D R A+K++ +M L + H V
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYV 64
Query: 302 CHPNTATL---------VGCCIENGLYLIFNFSQNGNLDAALHDE---RSKSLEWPIRYK 349
A L ++ L++ + +N L +H E + + W + +
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQ 124
Query: 350 IVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAK------------- 396
I+ L Y+H + IIHRD+K N+ + +I DFGLAK
Sbjct: 125 IL----EALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 397 -WLPNKCTH-HAAIPIEGTFGYLAPEYF-MHGIIDEKTDVFAFGVLLLEII 444
LP + +AI GT Y+A E G +EK D+++ G++ E+I
Sbjct: 178 QNLPGSSDNLTSAI---GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G + + H R P
Sbjct: 82 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFXEPHARFY 139
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ Q+TDFG AK + + P
Sbjct: 140 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTP- 195
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 196 ----EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G + + H R P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFY 146
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ Q+TDFG AK + + P
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTP- 202
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 203 ----EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G + + H R P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFXEPHARFY 146
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ Q+TDFG AK + + P
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTP- 202
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 203 ----EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G + + H R P
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFXEPHARFY 147
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ Q+TDFG AK + + P
Sbjct: 148 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTP- 203
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 204 ----EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 14/158 (8%)
Query: 294 ELGIIGHVCHPNTATLVGCCIENG---LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
E+ I+ + H + GCC + G + L+ + G+L L + +
Sbjct: 60 EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL---F 116
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ G+ YLH + IHR + A NVLL D +I DFGLAK +P ++ +
Sbjct: 117 AQQICEGMAYLHA---QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY-RVRE 172
Query: 411 EG---TFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIIT 445
+G F Y APE +DV++FGV L E++T
Sbjct: 173 DGDSPVFWY-APECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G + + H R P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFXEPHARFY 146
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ Q+TDFG AK + + P
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTP- 202
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 203 ----EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 67/159 (42%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G + + H R P
Sbjct: 75 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFY 132
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ Q+TDFG AK + + +
Sbjct: 133 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW-----TL 184
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
GT YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 185 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 89/213 (41%), Gaps = 22/213 (10%)
Query: 245 TNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCH 303
T+ + + +G G YS + + + + AVK + L+ G H
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLRYG-----QH 75
Query: 304 PNTATLVGCCIENG--LYLIFNFSQNGNL-DAALHDERSKSLEWPIRYKIVLGVARGLHY 360
PN TL ++G +Y++ + G L D L R K ++ + + + Y
Sbjct: 76 PNIITLKDV-YDDGKYVYVVTELXKGGELLDKIL---RQKFFSEREASAVLFTITKTVEY 131
Query: 361 LHKGCKRRIIHRDIKASNVLL----GPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGY 416
LH + ++HRD+K SN+L G +I DFG AK L + + T +
Sbjct: 132 LHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL--RAENGLLXTPCYTANF 186
Query: 417 LAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
+APE D D+++ GVLL +TG P
Sbjct: 187 VAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 92/216 (42%), Gaps = 44/216 (20%)
Query: 253 MVGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
++G G + V++ L + ++A+K++ EL I+ V HPN L
Sbjct: 47 VIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNR------ELQIMRIVKHPNVVDLKAF 100
Query: 313 CIENG-------LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVL-GVARGLHYLHKG 364
NG L L+ + A+ H + K + K+ + + R L Y+H
Sbjct: 101 FYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI 160
Query: 365 CKRRIIHRDIKASNVLLGPDFEP----QITDFGLAKWL----PNK---CTHHAAIPIEGT 413
I HRDIK N+LL P P ++ DFG AK L PN C+ +
Sbjct: 161 G---ICHRDIKPQNLLLDP---PSGVLKLIDFGSAKILIAGEPNVSXICSRY-------- 206
Query: 414 FGYLAPEYFMHGIIDEKT--DVFAFGVLLLEIITGR 447
Y APE + G + T D+++ G ++ E++ G+
Sbjct: 207 --YRAPE-LIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 80/205 (39%), Gaps = 15/205 (7%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G+G Y EV N +AVK + E+ I + H N G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 313 CIENGL-YLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
E + YL + G L + E + P + + G+ YLH G I H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLH-GIG--ITH 127
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF----MHGII 427
RDIK N+LL +I+DFGLA + GT Y+APE H
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA-- 185
Query: 428 DEKTDVFAFGVLLLEIITGRKPVDS 452
E DV++ G++L ++ G P D
Sbjct: 186 -EPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 78/201 (38%), Gaps = 9/201 (4%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G+G Y EV N +AVK + E+ I + H N G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 313 CIENGL-YLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
E + YL + G L + E + P + + G+ YLH I H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITH 128
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIID-EK 430
RDIK N+LL +I+DFGLA + GT Y+APE E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 431 TDVFAFGVLLLEIITGRKPVD 451
DV++ G++L ++ G P D
Sbjct: 189 VDVWSCGIVLTAMLAGELPWD 209
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 65/159 (40%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G + + H R P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFY 146
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+++ Q+TDFG AK + + P
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCGTP- 202
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 203 ----EYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 78/201 (38%), Gaps = 9/201 (4%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G+G Y EV N +AVK + E+ I + H N G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 313 CIENGL-YLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
E + YL + G L + E + P + + G+ YLH I H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITH 127
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIID-EK 430
RDIK N+LL +I+DFGLA + GT Y+APE E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 431 TDVFAFGVLLLEIITGRKPVD 451
DV++ G++L ++ G P D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWD 208
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 65/159 (40%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G + + H R P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFY 146
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ Q+TDFG AK + + P
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTP- 202
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YLAPE + ++ D +A GVL+ ++ G P
Sbjct: 203 ----EYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 17/172 (9%)
Query: 294 ELGIIGHVCHPNTATLVGCCIEN--GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV 351
E+ I+ V HPN TL EN + LI G L L + S S E + +
Sbjct: 65 EVSILRQVLHPNIITLHDV-YENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF--I 121
Query: 352 LGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEP----QITDFGLAKWLPNKCTHHAA 407
+ G++YLH ++I H D+K N++L P ++ DFGLA + +
Sbjct: 122 KQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN- 177
Query: 408 IPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPV--DSSRQNL 457
I GT ++APE + + + D+++ GV+ +++G P D+ ++ L
Sbjct: 178 --IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 227
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 369 IIHRDIKASNVLL---GPDFEPQITDFGLAKWLPNKCTHHAAIPIEG---TFGYLAPEYF 422
++HRD+K N+L + E +I DFG A+ P P++ T Y APE
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ-----PLKTPCFTLHYAAPELL 181
Query: 423 MHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLV 458
DE D+++ GV+L +++G+ P S ++L
Sbjct: 182 NQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLT 217
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 88/221 (39%), Gaps = 21/221 (9%)
Query: 255 GQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCI 314
QG Y L R +A+K+L EL ++ V H N L+
Sbjct: 41 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 98
Query: 315 EN-------GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKR 367
+Y++ + NL + E + Y+++ G+ +LH
Sbjct: 99 PQKSLEEFQDVYIVMEL-MDANLCQVIQMELDHERMSYLLYQMLCGIK----HLHSA--- 150
Query: 368 RIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGII 427
IIHRD+K SN+++ D +I DFGLA+ T P T Y APE +
Sbjct: 151 GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 207
Query: 428 DEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESG 468
E D+++ G ++ E++ K + R + W K + + G
Sbjct: 208 KENVDLWSVGCIMGEMVC-HKILFPGRDYIDQWNKVIEQLG 247
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 79/205 (38%), Gaps = 15/205 (7%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G+G Y EV N +AVK + E+ I + H N G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINAMLNHENVVKFYGH 73
Query: 313 CIENGL-YLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
E + YL + G L + E + P + + G+ YLH I H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITH 128
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF----MHGII 427
RDIK N+LL +I+DFGLA + GT Y+APE H
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA-- 186
Query: 428 DEKTDVFAFGVLLLEIITGRKPVDS 452
E DV++ G++L ++ G P D
Sbjct: 187 -EPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIE-- 411
+ RGL Y+H ++HRD+K SN+LL + +I DFGLA+ + + H E
Sbjct: 133 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEYV 188
Query: 412 GTFGYLAPEYFMHGIIDEKT-DVFAFGVLLLEIITGR 447
T Y APE ++ K+ D+++ G +L E+++ R
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 19/108 (17%)
Query: 350 IVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKW------------ 397
I + +A + +LH + ++HRD+K SN+ D ++ DFGL
Sbjct: 169 IFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 398 -LPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEII 444
+P TH + GT Y++PE K D+F+ G++L E++
Sbjct: 226 PMPAYATHXGQV---GTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 80/205 (39%), Gaps = 15/205 (7%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G+G Y EV N +AVK + E+ I + H N G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 313 CIENGL-YLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
E + YL + G L + E + P + + G+ YLH G I H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLH-GIG--ITH 127
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF----MHGII 427
RDIK N+LL +I+DFGLA + GT Y+APE H
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA-- 185
Query: 428 DEKTDVFAFGVLLLEIITGRKPVDS 452
E DV++ G++L ++ G P D
Sbjct: 186 -EPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIE-- 411
+ RGL Y+H ++HRD+K SN+LL + +I DFGLA+ + + H E
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEYV 192
Query: 412 GTFGYLAPEYFMHGIIDEKT-DVFAFGVLLLEIITGR 447
T Y APE ++ K+ D+++ G +L E+++ R
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 88/221 (39%), Gaps = 21/221 (9%)
Query: 255 GQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCI 314
QG Y L R +A+K+L EL ++ V H N L+
Sbjct: 30 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 87
Query: 315 EN-------GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKR 367
+Y++ + NL + E + Y+++ G+ +LH
Sbjct: 88 PQKSLEEFQDVYIVMEL-MDANLCQVIQMELDHERMSYLLYQMLCGIK----HLHSA--- 139
Query: 368 RIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGII 427
IIHRD+K SN+++ D +I DFGLA+ T P T Y APE +
Sbjct: 140 GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 196
Query: 428 DEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESG 468
E D+++ G ++ E++ K + R + W K + + G
Sbjct: 197 KENVDLWSVGCIMGEMVC-HKILFPGRDYIDQWNKVIEQLG 236
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIE-- 411
+ RGL Y+H ++HRD+K SN+LL + +I DFGLA+ + + H E
Sbjct: 133 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEYV 188
Query: 412 GTFGYLAPEYFMHGIIDEKT-DVFAFGVLLLEIITGR 447
T Y APE ++ K+ D+++ G +L E+++ R
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIE-- 411
+ RGL Y+H ++HRD+K SN+LL + +I DFGLA+ + + H E
Sbjct: 133 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLAR-VADPDHDHTGFLTEYV 188
Query: 412 GTFGYLAPEYFMHGIIDEKT-DVFAFGVLLLEIITGR 447
T Y APE ++ K+ D+++ G +L E+++ R
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIE-- 411
+ RGL Y+H ++HRD+K SN+LL + +I DFGLA+ + + H E
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEYV 192
Query: 412 GTFGYLAPEYFMHGIIDEKT-DVFAFGVLLLEIITGR 447
T Y APE ++ K+ D+++ G +L E+++ R
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIE-- 411
+ RGL Y+H ++HRD+K SN+LL + +I DFGLA+ + + H E
Sbjct: 135 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV 190
Query: 412 GTFGYLAPEYFMHGIIDEKT-DVFAFGVLLLEIITGR 447
T Y APE ++ K+ D+++ G +L E+++ R
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIE-- 411
+ RGL Y+H ++HRD+K SN+LL + +I DFGLA+ + + H E
Sbjct: 133 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV 188
Query: 412 GTFGYLAPEYFMHGIIDEKT-DVFAFGVLLLEIITGR 447
T Y APE ++ K+ D+++ G +L E+++ R
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 107/266 (40%), Gaps = 31/266 (11%)
Query: 232 LLTCFSYEEISSATNNFHSE-----------NMVGQGGYSEVYKGNLSDGRKIAVKRLXX 280
LL+ S+ +S T+ F E ++G+G + +VY G ++A++ +
Sbjct: 8 LLSARSFPRKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDI 65
Query: 281 XXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERS 339
F E+ H N +G C+ L +I + + L + + D +
Sbjct: 66 ERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKI 125
Query: 340 KSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGL--AKW 397
L+ +I + +G+ YLH + I+H+D+K+ NV + + ITDFGL
Sbjct: 126 -VLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYD-NGKVVITDFGLFSISG 180
Query: 398 LPNKCTHHAAIPIE-GTFGYLAPEYFMHGIID---------EKTDVFAFGVLLLEIITGR 447
+ + I+ G +LAPE D + +DVFA G + E+
Sbjct: 181 VLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHARE 240
Query: 448 KPVDSSRQNLVLWAKPLMESGNLTEL 473
P + ++W NL+++
Sbjct: 241 WPFKTQPAEAIIWQMGTGMKPNLSQI 266
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIE-- 411
+ RGL Y+H ++HRD+K SN+LL + +I DFGLA+ + + H E
Sbjct: 135 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV 190
Query: 412 GTFGYLAPEYFMHGIIDEKT-DVFAFGVLLLEIITGR 447
T Y APE ++ K+ D+++ G +L E+++ R
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIE-- 411
+ RGL Y+H ++HRD+K SN+LL + +I DFGLA+ + + H E
Sbjct: 141 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV 196
Query: 412 GTFGYLAPEYFMHGIIDEKT-DVFAFGVLLLEIITGR 447
T Y APE ++ K+ D+++ G +L E+++ R
Sbjct: 197 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIE-- 411
+ RGL Y+H ++HRD+K SN+LL + +I DFGLA+ + + H E
Sbjct: 133 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV 188
Query: 412 GTFGYLAPEYFMHGIIDEKT-DVFAFGVLLLEIITGR 447
T Y APE ++ K+ D+++ G +L E+++ R
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 80/205 (39%), Gaps = 15/205 (7%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G+G Y EV N +AVK + E+ I + H N G
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 71
Query: 313 CIENGL-YLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
E + YL + G L + E + P + + G+ YLH G I H
Sbjct: 72 RREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLH-GIG--ITH 126
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF----MHGII 427
RDIK N+LL +I+DFGLA + GT Y+APE H
Sbjct: 127 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA-- 184
Query: 428 DEKTDVFAFGVLLLEIITGRKPVDS 452
E DV++ G++L ++ G P D
Sbjct: 185 -EPVDVWSCGIVLTAMLAGELPWDQ 208
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIE-- 411
+ RGL Y+H ++HRD+K SN+LL + +I DFGLA+ + + H E
Sbjct: 131 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV 186
Query: 412 GTFGYLAPEYFMHGIIDEKT-DVFAFGVLLLEIITGR 447
T Y APE ++ K+ D+++ G +L E+++ R
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIE-- 411
+ RGL Y+H ++HRD+K SN+LL + +I DFGLA+ + + H E
Sbjct: 131 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV 186
Query: 412 GTFGYLAPEYFMHGIIDEKT-DVFAFGVLLLEIITGR 447
T Y APE ++ K+ D+++ G +L E+++ R
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIE-- 411
+ RGL Y+H ++HRD+K SN+LL + +I DFGLA+ + + H E
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV 192
Query: 412 GTFGYLAPEYFMHGIIDEKT-DVFAFGVLLLEIITGR 447
T Y APE ++ K+ D+++ G +L E+++ R
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 21/165 (12%)
Query: 294 ELGIIGHVCHPNTATLVGCCIEN--GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV 351
E+ I+ + HPN TL EN + LI G L L ++ S + + ++ +
Sbjct: 58 EVNILREIRHPNIITL-HDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQF--L 114
Query: 352 LGVARGLHYLHKGCKRRIIHRDIKASNVLL----GPDFEPQITDFGLAKWLPNKCTHHAA 407
+ G+HYLH +RI H D+K N++L P+ ++ DFG+A + A
Sbjct: 115 KQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI------EAG 165
Query: 408 IPIEGTFG---YLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
+ FG ++APE + + + D+++ GV+ +++G P
Sbjct: 166 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 21/165 (12%)
Query: 294 ELGIIGHVCHPNTATLVGCCIEN--GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV 351
E+ I+ + HPN TL EN + LI G L L ++ S + + ++ +
Sbjct: 65 EVNILREIRHPNIITL-HDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQF--L 121
Query: 352 LGVARGLHYLHKGCKRRIIHRDIKASNVLL----GPDFEPQITDFGLAKWLPNKCTHHAA 407
+ G+HYLH +RI H D+K N++L P+ ++ DFG+A + A
Sbjct: 122 KQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI------EAG 172
Query: 408 IPIEGTFG---YLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
+ FG ++APE + + + D+++ GV+ +++G P
Sbjct: 173 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIE-- 411
+ RGL Y+H ++HRD+K SN+LL + +I DFGLA+ + + H E
Sbjct: 138 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV 193
Query: 412 GTFGYLAPEYFMHGIIDEKT-DVFAFGVLLLEIITGR 447
T Y APE ++ K+ D+++ G +L E+++ R
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ ++ G + + H R P
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARFY 147
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+++ ++TDFG AK + + P
Sbjct: 148 AAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTP- 203
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 204 ----EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIE-- 411
+ RGL Y+H ++HRD+K SN+LL + +I DFGLA+ + + H E
Sbjct: 139 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV 194
Query: 412 GTFGYLAPEYFMHGIIDEKT-DVFAFGVLLLEIITGR 447
T Y APE ++ K+ D+++ G +L E+++ R
Sbjct: 195 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIE-- 411
+ RGL Y+H ++HRD+K SN+LL + +I DFGLA+ + + H E
Sbjct: 130 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV 185
Query: 412 GTFGYLAPEYFMHGIIDEKT-DVFAFGVLLLEIITGR 447
T Y APE ++ K+ D+++ G +L E+++ R
Sbjct: 186 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIE-- 411
+ RGL Y+H ++HRD+K SN+LL + +I DFGLA+ + + H E
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV 192
Query: 412 GTFGYLAPEYFMHGIIDEKT-DVFAFGVLLLEIITGR 447
T Y APE ++ K+ D+++ G +L E+++ R
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIE-- 411
+ RGL Y+H ++HRD+K SN+LL + +I DFGLA+ + + H E
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV 192
Query: 412 GTFGYLAPEYFMHGIIDEKT-DVFAFGVLLLEIITGR 447
T Y APE ++ K+ D+++ G +L E+++ R
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIE-- 411
+ RGL Y+H ++HRD+K SN+LL + +I DFGLA+ + + H E
Sbjct: 153 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV 208
Query: 412 GTFGYLAPEYFMHGIIDEKT-DVFAFGVLLLEIITGR 447
T Y APE ++ K+ D+++ G +L E+++ R
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 80/205 (39%), Gaps = 15/205 (7%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G+G Y EV N +AVK + E+ I + H N G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 313 CIENGL-YLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
E + YL + G L + E + P + + G+ YLH G I H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLH-GIG--ITH 127
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF----MHGII 427
RDIK N+LL +I+DFGLA + GT Y+APE H
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA-- 185
Query: 428 DEKTDVFAFGVLLLEIITGRKPVDS 452
E DV++ G++L ++ G P D
Sbjct: 186 -EPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIE-- 411
+ RGL Y+H ++HRD+K SN+LL + +I DFGLA+ + + H E
Sbjct: 153 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEYV 208
Query: 412 GTFGYLAPEYFMHGIIDEKT-DVFAFGVLLLEIITGR 447
T Y APE ++ K+ D+++ G +L E+++ R
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIE-- 411
+ RGL Y+H ++HRD+K SN+LL + +I DFGLA+ + + H E
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLXEXV 192
Query: 412 GTFGYLAPEYFMHGIIDEKT-DVFAFGVLLLEIITGR 447
T Y APE ++ K+ D+++ G +L E+++ R
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 21/165 (12%)
Query: 294 ELGIIGHVCHPNTATLVGCCIEN--GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV 351
E+ I+ + HPN TL EN + LI G L L ++ S + + ++ +
Sbjct: 79 EVNILREIRHPNIITL-HDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQF--L 135
Query: 352 LGVARGLHYLHKGCKRRIIHRDIKASNVLL----GPDFEPQITDFGLAKWLPNKCTHHAA 407
+ G+HYLH +RI H D+K N++L P+ ++ DFG+A + A
Sbjct: 136 KQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI------EAG 186
Query: 408 IPIEGTFG---YLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
+ FG ++APE + + + D+++ GV+ +++G P
Sbjct: 187 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIE-- 411
+ RGL Y+H ++HRD+K SN+LL + +I DFGLA+ + + H E
Sbjct: 138 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLXEXV 193
Query: 412 GTFGYLAPEYFMHGIIDEKT-DVFAFGVLLLEIITGR 447
T Y APE ++ K+ D+++ G +L E+++ R
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 121/281 (43%), Gaps = 33/281 (11%)
Query: 244 ATNNFHS---ENMVGQGGYSEVYK-GNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIG 299
A N+F++ ++G G + +V+K + G K+A K + E+ ++
Sbjct: 84 AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVK--NEISVMN 141
Query: 300 HVCHPNTATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGL 358
+ H N L +N + L+ + G L + DE S +L + + G+
Sbjct: 142 QLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDE-SYNLTELDTILFMKQICEGI 200
Query: 359 HYLHKGCKRRIIHRDIKASNVL-LGPDFEP-QITDFGLAKWLPNKCTHHAAIPIEGTFGY 416
++H+ I+H D+K N+L + D + +I DFGLA+ + GT +
Sbjct: 201 RHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF---GTPEF 254
Query: 417 LAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPV----DSSRQNLVLWAKPLMESGNLTE 472
LAPE + + TD+++ GV+ +++G P D+ N +L + +E +
Sbjct: 255 LAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQD 314
Query: 473 LVDPSLEGEYDTDQMHRLVLIADYCVRQTSAWRPSMSEVLE 513
+ + + E I+ +++ S WR S SE L+
Sbjct: 315 ISEEAKE------------FISKLLIKEKS-WRISASEALK 342
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 79/205 (38%), Gaps = 15/205 (7%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G+G Y EV N +AVK + E+ I + H N G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 313 CIENGL-YLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
E + YL + G L + E + P + + G+ YLH I H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITH 128
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF----MHGII 427
RDIK N+LL +I+DFGLA + GT Y+APE H
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA-- 186
Query: 428 DEKTDVFAFGVLLLEIITGRKPVDS 452
E DV++ G++L ++ G P D
Sbjct: 187 -EPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 79/205 (38%), Gaps = 15/205 (7%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G+G Y EV N +AVK + E+ I + H N G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 313 CIENGL-YLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
E + YL + G L + E + P + + G+ YLH I H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITH 128
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF----MHGII 427
RDIK N+LL +I+DFGLA + GT Y+APE H
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA-- 186
Query: 428 DEKTDVFAFGVLLLEIITGRKPVDS 452
E DV++ G++L ++ G P D
Sbjct: 187 -EPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 79/205 (38%), Gaps = 15/205 (7%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G+G Y EV N +AVK + E+ I + H N G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 313 CIENGL-YLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
E + YL + G L + E + P + + G+ YLH I H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITH 128
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF----MHGII 427
RDIK N+LL +I+DFGLA + GT Y+APE H
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA-- 186
Query: 428 DEKTDVFAFGVLLLEIITGRKPVDS 452
E DV++ G++L ++ G P D
Sbjct: 187 -EPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 68/153 (44%), Gaps = 15/153 (9%)
Query: 303 HPNTATLVGCCIENGL-YLIFNFSQNGNL--DAALHDERSKSLEWPIRYKIVLGVARGLH 359
HPN L E G YLIF+ G L D + S++ +I+ V LH
Sbjct: 69 HPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV---LH 125
Query: 360 YLHKGCKRRIIHRDIKASNVLLGPDFE---PQITDFGLAKWLPNKCTHHAAIPIEGTFGY 416
G ++HR++K N+LL + ++ DFGLA + + A GT GY
Sbjct: 126 CHQMG----VVHRNLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAGTPGY 179
Query: 417 LAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
L+PE + D++A GV+L ++ G P
Sbjct: 180 LSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 212
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ ++ G + + H R P
Sbjct: 90 LNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARFY 147
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+++ ++TDFG AK + + P
Sbjct: 148 AAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTP- 203
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 204 ----EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIE-- 411
+ RGL Y+H ++HRD+K SN+LL + +I DFGLA+ + + H E
Sbjct: 135 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLAR-VADPDHDHTGFLTEYV 190
Query: 412 GTFGYLAPEYFMHGIIDEKT-DVFAFGVLLLEIITGR 447
T Y APE ++ K+ D+++ G +L E+++ R
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ ++ G + + H R P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARFY 146
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+++ ++TDFG AK + + P
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTP- 202
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 203 ----EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ ++ G + + H R P
Sbjct: 90 LNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARFY 147
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+++ ++TDFG AK + + P
Sbjct: 148 AAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTP- 203
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 204 ----EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ ++ G + + H R P
Sbjct: 90 LNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFXEPHARFY 147
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+++ ++TDFG AK + + P
Sbjct: 148 AAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTP- 203
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 204 ----EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ ++ G + + H R P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFXEPHARFY 146
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+++ ++TDFG AK + + P
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTP- 202
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 203 ----EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIE-- 411
+ RGL Y+H ++HRD+K SN+L+ + +I DFGLA+ + + H E
Sbjct: 153 ILRGLKYIHSA---NVLHRDLKPSNLLINTTCDLKICDFGLAR-IADPEHDHTGFLTEXV 208
Query: 412 GTFGYLAPEYFMHGIIDEKT-DVFAFGVLLLEIITGR 447
T Y APE ++ K+ D+++ G +L E+++ R
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 80/205 (39%), Gaps = 15/205 (7%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G+G Y EV N +AVK + E+ I + H N G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 313 CIENGL-YLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
E + YL + G L + E + P + + G+ YLH G I H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLH-GIG--ITH 128
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF----MHGII 427
RDIK N+LL +I+DFGLA + GT Y+APE H
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA-- 186
Query: 428 DEKTDVFAFGVLLLEIITGRKPVDS 452
E DV++ G++L ++ G P D
Sbjct: 187 -EPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 79/205 (38%), Gaps = 15/205 (7%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G+G Y EV N +AVK + E+ I + H N G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 313 CIENGL-YLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
E + YL + G L + E + P + + G+ YLH I H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITH 128
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF----MHGII 427
RDIK N+LL +I+DFGLA + GT Y+APE H
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA-- 186
Query: 428 DEKTDVFAFGVLLLEIITGRKPVDS 452
E DV++ G++L ++ G P D
Sbjct: 187 -EPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 79/205 (38%), Gaps = 15/205 (7%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G+G Y EV N +AVK + E+ I + H N G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 313 CIENGL-YLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
E + YL + G L + E + P + + G+ YLH I H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITH 127
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF----MHGII 427
RDIK N+LL +I+DFGLA + GT Y+APE H
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA-- 185
Query: 428 DEKTDVFAFGVLLLEIITGRKPVDS 452
E DV++ G++L ++ G P D
Sbjct: 186 -EPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 79/205 (38%), Gaps = 15/205 (7%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G+G Y EV N +AVK + E+ I + H N G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 313 CIENGL-YLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
E + YL + G L + E + P + + G+ YLH I H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITH 127
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF----MHGII 427
RDIK N+LL +I+DFGLA + GT Y+APE H
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA-- 185
Query: 428 DEKTDVFAFGVLLLEIITGRKPVDS 452
E DV++ G++L ++ G P D
Sbjct: 186 -EPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 79/205 (38%), Gaps = 15/205 (7%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G+G Y EV N +AVK + E+ I + H N G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 313 CIENGL-YLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
E + YL + G L + E + P + + G+ YLH I H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITH 127
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF----MHGII 427
RDIK N+LL +I+DFGLA + GT Y+APE H
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA-- 185
Query: 428 DEKTDVFAFGVLLLEIITGRKPVDS 452
E DV++ G++L ++ G P D
Sbjct: 186 -EPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 64/159 (40%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G + + H R P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFY 146
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ Q+TDFG AK + + P
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTP- 202
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
YLAP + ++ D +A GVL+ E+ G P
Sbjct: 203 ----EYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 79/205 (38%), Gaps = 15/205 (7%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G+G Y EV N +AVK + E+ I + H N G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 313 CIENGL-YLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
E + YL + G L + E + P + + G+ YLH I H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITH 127
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF----MHGII 427
RDIK N+LL +I+DFGLA + GT Y+APE H
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA-- 185
Query: 428 DEKTDVFAFGVLLLEIITGRKPVDS 452
E DV++ G++L ++ G P D
Sbjct: 186 -EPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 81/168 (48%), Gaps = 15/168 (8%)
Query: 291 FLMELGIIGHVCHPNTATLVGCCIE-NGLYLIFNFSQNGNL----DAALHDERSKSLEWP 345
F EL II + + T G + +Y+I+ + +N ++ + +++ + P
Sbjct: 90 FKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIP 149
Query: 346 IRYK--IVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCT 403
I+ I+ V Y+H ++ I HRD+K SN+L+ + +++DFG ++++ +K
Sbjct: 150 IQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKI 207
Query: 404 HHAAIPIEGTFGYLAPEYFMH--GIIDEKTDVFAFGVLLLEIITGRKP 449
+ GT+ ++ PE+F + K D+++ G+ L + P
Sbjct: 208 KGS----RGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVP 251
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 96/219 (43%), Gaps = 29/219 (13%)
Query: 250 SENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTAT 308
+ ++G+G Y++V +L +G++ AVK + +E + C N
Sbjct: 17 TSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVE---TLYQCQGNKNI 73
Query: 309 LVGCCIE-----NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHK 363
L IE YL+F Q G++ A H ++ K ++V VA L +LH
Sbjct: 74 LE--LIEFFEDDTRFYLVFEKLQGGSILA--HIQKQKHFNEREASRVVRDVAAALDFLHT 129
Query: 364 GCKRRIIHRDIKASNVLL-GPD-FEP-QITDFGLAKW--LPNKCTHHAAIPIE---GTFG 415
+ I HRD+K N+L P+ P +I DF L L N CT + G+
Sbjct: 130 ---KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAE 186
Query: 416 YLAPEYF-----MHGIIDEKTDVFAFGVLLLEIITGRKP 449
Y+APE D++ D+++ GV+L +++G P
Sbjct: 187 YMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 88/221 (39%), Gaps = 21/221 (9%)
Query: 255 GQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCI 314
QG Y L R +A+K+L EL ++ V H N L+
Sbjct: 36 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 93
Query: 315 EN-------GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKR 367
+Y++ + NL + E + Y+++ G+ +LH
Sbjct: 94 PQKSLEEFQDVYIVMEL-MDANLCQVIQMELDHERMSYLLYQMLCGIK----HLHSA--- 145
Query: 368 RIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGII 427
IIHRD+K SN+++ D +I DFGLA+ T P T Y APE +
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMEPEVVTRYYRAPEVILGMGY 202
Query: 428 DEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESG 468
E D+++ G ++ E++ K + R + W K + + G
Sbjct: 203 KENVDIWSVGCIMGEMVC-HKILFPGRDYIDQWNKVIEQLG 242
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 99/232 (42%), Gaps = 29/232 (12%)
Query: 241 ISSATNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIG 299
+ + +++F ++++G+G Y V + G +A+K++ L E+ I+
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT-LREIKILK 64
Query: 300 HVCHPNTATLVGC----CIEN--GLYLIFNFSQNGNLDAALHDERSKSL--EWPIRYKIV 351
H H N T+ EN +Y+I Q LH S + + I+Y +
Sbjct: 65 HFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD-----LHRVISTQMLSDDHIQY-FI 118
Query: 352 LGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHA----- 406
R + LH +IHRD+K SN+L+ + + ++ DFGLA+ + ++
Sbjct: 119 YQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQ 175
Query: 407 ---AIPIEGTFGYLAPEYFMHGI-IDEKTDVFAFGVLLLEIITGRKPVDSSR 454
+ T Y APE + DV++ G +L E+ R+P+ R
Sbjct: 176 QSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGR 226
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 294 ELGIIGHVCHPNTATLVGCCIEN--GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV 351
E+ I+ + HPN TL EN + LI G L L ++ S + E + +
Sbjct: 64 EVSILKEIQHPNVITL-HEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF--L 120
Query: 352 LGVARGLHYLHKGCKRRIIHRDIKASNVLL----GPDFEPQITDFGLAKWLP--NKCTHH 405
+ G++YLH +I H D+K N++L P +I DFGLA + N+ +
Sbjct: 121 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN- 176
Query: 406 AAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPV--DSSRQNL 457
I GT ++APE + + + D+++ GV+ +++G P D+ ++ L
Sbjct: 177 ----IFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 226
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 318 LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKAS 377
L ++ G L + + D ++ +I+ + + YLH I HRD+K
Sbjct: 104 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 160
Query: 378 NVLLG---PDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVF 434
N+L P+ ++TDFG AK +H++ T Y+APE D+ D++
Sbjct: 161 NLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 217
Query: 435 AFGVLLLEIITGRKPVDSS 453
+ GV++ ++ G P S+
Sbjct: 218 SLGVIMYILLCGYPPFYSN 236
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 318 LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKAS 377
L ++ G L + + D ++ +I+ + + YLH I HRD+K
Sbjct: 96 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 152
Query: 378 NVLLG---PDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVF 434
N+L P+ ++TDFG AK +H++ T Y+APE D+ D++
Sbjct: 153 NLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 209
Query: 435 AFGVLLLEIITGRKPVDSS 453
+ GV++ ++ G P S+
Sbjct: 210 SLGVIMYILLCGYPPFYSN 228
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 318 LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKAS 377
L ++ G L + + D ++ +I+ + + YLH I HRD+K
Sbjct: 134 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 190
Query: 378 NVLLG---PDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVF 434
N+L P+ ++TDFG AK +H++ T Y+APE D+ D++
Sbjct: 191 NLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 247
Query: 435 AFGVLLLEIITGRKPVDSS 453
+ GV++ ++ G P S+
Sbjct: 248 SLGVIMYILLCGYPPFYSN 266
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 318 LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKAS 377
L ++ G L + + D ++ +I+ + + YLH I HRD+K
Sbjct: 88 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 144
Query: 378 NVLLG---PDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVF 434
N+L P+ ++TDFG AK +H++ T Y+APE D+ D++
Sbjct: 145 NLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 201
Query: 435 AFGVLLLEIITGRKPVDSS 453
+ GV++ ++ G P S+
Sbjct: 202 SLGVIMYILLCGYPPFYSN 220
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 318 LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKAS 377
L ++ G L + + D ++ +I+ + + YLH I HRD+K
Sbjct: 140 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 196
Query: 378 NVLLG---PDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVF 434
N+L P+ ++TDFG AK +H++ T Y+APE D+ D++
Sbjct: 197 NLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 253
Query: 435 AFGVLLLEIITGRKPVDSS 453
+ GV++ ++ G P S+
Sbjct: 254 SLGVIMYILLCGYPPFYSN 272
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 318 LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKAS 377
L ++ G L + + D ++ +I+ + + YLH I HRD+K
Sbjct: 94 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 150
Query: 378 NVLLG---PDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVF 434
N+L P+ ++TDFG AK +H++ T Y+APE D+ D++
Sbjct: 151 NLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 207
Query: 435 AFGVLLLEIITGRKPVDSS 453
+ GV++ ++ G P S+
Sbjct: 208 SLGVIMYILLCGYPPFYSN 226
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 94/219 (42%), Gaps = 47/219 (21%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXX------XXXXXXXXXFLMELGIIGHVCHPNTA 307
+G+G + EV++G G ++AVK L I+G + N
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNK- 107
Query: 308 TLVGCCIENG----LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHK 363
+NG L+L+ ++ ++G+L L + + ++E I K+ L A GL +LH
Sbjct: 108 -------DNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMI--KLALSTASGLAHLHM 157
Query: 364 GC-----KRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAA---IPIE---- 411
K I HRD+K+ N+L+ + I D GLA H +A I I
Sbjct: 158 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA------VRHDSATDTIDIAPNHR 211
Query: 412 -GTFGYLAPEYF------MHGIIDEKTDVFAFGVLLLEI 443
GT Y+APE H ++ D++A G++ EI
Sbjct: 212 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 88/221 (39%), Gaps = 21/221 (9%)
Query: 255 GQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCI 314
QG Y L R +A+K+L EL ++ V H N L+
Sbjct: 36 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 93
Query: 315 EN-------GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKR 367
+Y++ + NL + E + Y+++ G+ +LH
Sbjct: 94 PQKSLEEFQDVYIVMEL-MDANLCQVIQMELDHERMSYLLYQMLCGIK----HLHSA--- 145
Query: 368 RIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGII 427
IIHRD+K SN+++ D +I DFGLA+ T P T Y APE +
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMEPEVVTRYYRAPEVILGMGY 202
Query: 428 DEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESG 468
E D+++ G ++ E++ K + R + W K + + G
Sbjct: 203 KENVDLWSVGCIMGEMVC-HKILFPGRDYIDQWNKVIEQLG 242
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 318 LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKAS 377
L ++ G L + + D ++ +I+ + + YLH I HRD+K
Sbjct: 89 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 145
Query: 378 NVLLG---PDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVF 434
N+L P+ ++TDFG AK +H++ T Y+APE D+ D++
Sbjct: 146 NLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 202
Query: 435 AFGVLLLEIITGRKPVDSS 453
+ GV++ ++ G P S+
Sbjct: 203 SLGVIMYILLCGYPPFYSN 221
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 318 LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKAS 377
L ++ G L + + D ++ +I+ + + YLH I HRD+K
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 146
Query: 378 NVLLG---PDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVF 434
N+L P+ ++TDFG AK +H++ T Y+APE D+ D++
Sbjct: 147 NLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 203
Query: 435 AFGVLLLEIITGRKPVDSS 453
+ GV++ ++ G P S+
Sbjct: 204 SLGVIMYILLCGYPPFYSN 222
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 94/218 (43%), Gaps = 30/218 (13%)
Query: 318 LYLIFNFSQNGNLDAALHDERS-KSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKA 376
YL+F + G++ + +H R LE + +V VA L +LH + I HRD+K
Sbjct: 86 FYLVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVASALDFLHN---KGIAHRDLKP 139
Query: 377 SNVLL-GPD-FEP-QITDFGLAKW--LPNKC----THHAAIPIEGTFGYLAPEYF----- 422
N+L P+ P +I DFGL L C T P G+ Y+APE
Sbjct: 140 ENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPC-GSAEYMAPEVVEAFSE 198
Query: 423 MHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEGEY 482
I D++ D+++ GV+L +++G P + W + L + EG+Y
Sbjct: 199 EASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKY 258
Query: 483 ---DTDQMHRLV----LIADYCVRQTSAWRPSMSEVLE 513
D D H LI+ VR R S ++VL+
Sbjct: 259 EFPDKDWAHISCAAKDLISKLLVRDAKQ-RLSAAQVLQ 295
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 318 LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKAS 377
L ++ G L + + D ++ +I+ + + YLH I HRD+K
Sbjct: 88 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 144
Query: 378 NVLLG---PDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVF 434
N+L P+ ++TDFG AK +H++ T Y+APE D+ D++
Sbjct: 145 NLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMW 201
Query: 435 AFGVLLLEIITGRKPVDSS 453
+ GV++ ++ G P S+
Sbjct: 202 SLGVIMYILLCGYPPFYSN 220
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 318 LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKAS 377
L ++ G L + + D ++ +I+ + + YLH I HRD+K
Sbjct: 95 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 151
Query: 378 NVLLG---PDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVF 434
N+L P+ ++TDFG AK +H++ T Y+APE D+ D++
Sbjct: 152 NLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 208
Query: 435 AFGVLLLEIITGRKPVDSS 453
+ GV++ ++ G P S+
Sbjct: 209 SLGVIMYILLCGYPPFYSN 227
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 67/164 (40%), Gaps = 13/164 (7%)
Query: 294 ELGIIGHVCHPNTATLVGCCIENGL-YLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVL 352
E+ I + H N G E + YL + G L + E + P +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFH 111
Query: 353 GVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEG 412
+ G+ YLH G I HRDIK N+LL +I+DFGLA + G
Sbjct: 112 QLMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 413 TFGYLAPEYF----MHGIIDEKTDVFAFGVLLLEIITGRKPVDS 452
T Y+APE H E DV++ G++L ++ G P D
Sbjct: 169 TLPYVAPELLKRREFHA---EPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 90/215 (41%), Gaps = 15/215 (6%)
Query: 253 MVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXX---XXXXFLMELGIIGHVCHPNTAT 308
++G+G +S V + N G++ AVK + E I + HP+
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 309 LVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEW--PIRYKIVLGVARGLHYLHKGC 365
L+ +G LY++F F +L + + + + + L Y H
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN- 149
Query: 366 KRRIIHRDIKASNVLLGP--DFEP-QITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF 422
IIHRD+K NVLL + P ++ DFG+A L + A GT ++APE
Sbjct: 150 --NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGE--SGLVAGGRVGTPHFMAPEVV 205
Query: 423 MHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNL 457
+ DV+ GV+L +++G P +++ L
Sbjct: 206 KREPYGKPVDVWGCGVILFILLSGCLPFYGTKERL 240
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G++ + H R P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFS--HLRRIGRFSEPHARFY 146
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ ++ DFG AK + + +
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX-----L 198
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
GT YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 94/219 (42%), Gaps = 47/219 (21%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXX------XXXXXXXXXFLMELGIIGHVCHPNTA 307
+G+G + EV++G G ++AVK L I+G + N
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNK- 94
Query: 308 TLVGCCIENG----LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHK 363
+NG L+L+ ++ ++G+L L + + ++E I K+ L A GL +LH
Sbjct: 95 -------DNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMI--KLALSTASGLAHLHM 144
Query: 364 GC-----KRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAA---IPIE---- 411
K I HRD+K+ N+L+ + I D GLA H +A I I
Sbjct: 145 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA------VRHDSATDTIDIAPNHR 198
Query: 412 -GTFGYLAPEYF------MHGIIDEKTDVFAFGVLLLEI 443
GT Y+APE H ++ D++A G++ EI
Sbjct: 199 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 10/132 (7%)
Query: 318 LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKAS 377
LY++ ++ G + + H R P + YLH +I+RD+K
Sbjct: 117 LYMVLEYAPGGEMFS--HLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPE 171
Query: 378 NVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFG 437
N+L+ ++ DFG AK + + + GT YLAPE + ++ D +A G
Sbjct: 172 NLLIDQQGYIKVADFGFAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 438 VLLLEIITGRKP 449
VL+ E+ G P
Sbjct: 227 VLIYEMAAGYPP 238
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 318 LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKAS 377
L ++ G L + + D ++ +I+ + + YLH I HRD+K
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 146
Query: 378 NVLLG---PDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVF 434
N+L P+ ++TDFG AK +H++ T Y+APE D+ D++
Sbjct: 147 NLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 203
Query: 435 AFGVLLLEIITGRKPVDSS 453
+ GV++ ++ G P S+
Sbjct: 204 SLGVIMYILLCGYPPFYSN 222
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G++ + H R P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFS--HLRRIGRFSEPHARFY 146
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ ++ DFG AK + + +
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX-----L 198
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
GT YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 94/219 (42%), Gaps = 47/219 (21%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXX------XXXXXXXXXFLMELGIIGHVCHPNTA 307
+G+G + EV++G G ++AVK L I+G + N
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNK- 68
Query: 308 TLVGCCIENG----LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHK 363
+NG L+L+ ++ ++G+L L + + ++E I K+ L A GL +LH
Sbjct: 69 -------DNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMI--KLALSTASGLAHLHM 118
Query: 364 GC-----KRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAA---IPIE---- 411
K I HRD+K+ N+L+ + I D GLA H +A I I
Sbjct: 119 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA------VRHDSATDTIDIAPNHR 172
Query: 412 -GTFGYLAPEYF------MHGIIDEKTDVFAFGVLLLEI 443
GT Y+APE H ++ D++A G++ EI
Sbjct: 173 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 371 HRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEK 430
HRD+K N+L+ D + DFG+A ++ + GT Y APE F +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-GTLYYXAPERFSESHATYR 215
Query: 431 TDVFAFGVLLLEIITGRKP 449
D++A +L E +TG P
Sbjct: 216 ADIYALTCVLYECLTGSPP 234
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 94/219 (42%), Gaps = 47/219 (21%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXX------XXXXXXXXXFLMELGIIGHVCHPNTA 307
+G+G + EV++G G ++AVK L I+G + N
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNK- 69
Query: 308 TLVGCCIENG----LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHK 363
+NG L+L+ ++ ++G+L L + + ++E I K+ L A GL +LH
Sbjct: 70 -------DNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMI--KLALSTASGLAHLHM 119
Query: 364 GC-----KRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAA---IPIE---- 411
K I HRD+K+ N+L+ + I D GLA H +A I I
Sbjct: 120 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA------VRHDSATDTIDIAPNHR 173
Query: 412 -GTFGYLAPEYF------MHGIIDEKTDVFAFGVLLLEI 443
GT Y+APE H ++ D++A G++ EI
Sbjct: 174 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 64/159 (40%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G + + H R P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFY 146
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ Q+TDFG AK + + P
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTP- 202
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
LAPE + ++ D +A GVL+ E+ G P
Sbjct: 203 ----EALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 94/219 (42%), Gaps = 47/219 (21%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXX------XXXXXXXXXFLMELGIIGHVCHPNTA 307
+G+G + EV++G G ++AVK L I+G + N
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNK- 74
Query: 308 TLVGCCIENG----LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHK 363
+NG L+L+ ++ ++G+L L + + ++E I K+ L A GL +LH
Sbjct: 75 -------DNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMI--KLALSTASGLAHLHM 124
Query: 364 GC-----KRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAA---IPIE---- 411
K I HRD+K+ N+L+ + I D GLA H +A I I
Sbjct: 125 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA------VRHDSATDTIDIAPNHR 178
Query: 412 -GTFGYLAPEYF------MHGIIDEKTDVFAFGVLLLEI 443
GT Y+APE H ++ D++A G++ EI
Sbjct: 179 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 112/278 (40%), Gaps = 70/278 (25%)
Query: 238 YEEISSATNNFHSENMVGQGGYSEVY--KGNLSDG--RKIAVKRLXXXXXXXXXXXXFLM 293
YE + +N F E+ +G+G +S VY L G KIA+K L
Sbjct: 13 YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS----------- 61
Query: 294 ELGIIGHVCHP-NTATLVGCCI-----ENGLYLIFNFSQNGNLDAAL----HD---ERSK 340
HP A + C +N + + + F +N ++ A+ H+ +
Sbjct: 62 ---------HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILN 112
Query: 341 SLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEP-QITDFGLA---- 395
SL + + +L + + L +H+ I+HRD+K SN L + + DFGLA
Sbjct: 113 SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTH 169
Query: 396 -----------------KWLPNKCT-----HHAAIPIEGTFGYLAPEYFMHGIIDEKT-- 431
+ NKC+ P GT G+ APE + ++ T
Sbjct: 170 DTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPE-VLTKCPNQTTAI 228
Query: 432 DVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGN 469
D+++ GV+ L +++GR P + +L A+ + G+
Sbjct: 229 DMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGS 266
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 94/219 (42%), Gaps = 47/219 (21%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXX------XXXXXXXXXFLMELGIIGHVCHPNTA 307
+G+G + EV++G G ++AVK L I+G + N
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNK- 71
Query: 308 TLVGCCIENG----LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHK 363
+NG L+L+ ++ ++G+L L + + ++E I K+ L A GL +LH
Sbjct: 72 -------DNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMI--KLALSTASGLAHLHM 121
Query: 364 GC-----KRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAA---IPIE---- 411
K I HRD+K+ N+L+ + I D GLA H +A I I
Sbjct: 122 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA------VRHDSATDTIDIAPNHR 175
Query: 412 -GTFGYLAPEYF------MHGIIDEKTDVFAFGVLLLEI 443
GT Y+APE H ++ D++A G++ EI
Sbjct: 176 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 294 ELGIIGHVCHPNTATLVGCCIEN--GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV 351
E+ I+ + HPN TL EN + LI G L L ++ S + E + +
Sbjct: 64 EVSILKEIQHPNVITL-HEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF--L 120
Query: 352 LGVARGLHYLHKGCKRRIIHRDIKASNVLL----GPDFEPQITDFGLAKWLP--NKCTHH 405
+ G++YLH +I H D+K N++L P +I DFGLA + N+ +
Sbjct: 121 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN- 176
Query: 406 AAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPV--DSSRQNL 457
I GT ++APE + + + D+++ GV+ +++G P D+ ++ L
Sbjct: 177 ----IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 226
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 294 ELGIIGHVCHPNTATLVGCCIEN--GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV 351
E+ I+ + HPN TL EN + LI G L L ++ S + E + +
Sbjct: 64 EVSILKEIQHPNVITL-HEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF--L 120
Query: 352 LGVARGLHYLHKGCKRRIIHRDIKASNVLL----GPDFEPQITDFGLAKWLP--NKCTHH 405
+ G++YLH +I H D+K N++L P +I DFGLA + N+ +
Sbjct: 121 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN- 176
Query: 406 AAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPV--DSSRQNL 457
I GT ++APE + + + D+++ GV+ +++G P D+ ++ L
Sbjct: 177 ----IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 226
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 294 ELGIIGHVCHPNTATLVGCCIEN--GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV 351
E+ I+ + HPN TL EN + LI G L L ++ S + E + +
Sbjct: 64 EVSILKEIQHPNVITL-HEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF--L 120
Query: 352 LGVARGLHYLHKGCKRRIIHRDIKASNVLL----GPDFEPQITDFGLAKWLP--NKCTHH 405
+ G++YLH +I H D+K N++L P +I DFGLA + N+ +
Sbjct: 121 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN- 176
Query: 406 AAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPV--DSSRQNL 457
I GT ++APE + + + D+++ GV+ +++G P D+ ++ L
Sbjct: 177 ----IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 226
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 294 ELGIIGHVCHPNTATLVGCCIEN--GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV 351
E+ I+ + HPN TL EN + LI G L L ++ S + E + +
Sbjct: 64 EVSILKEIQHPNVITL-HEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF--L 120
Query: 352 LGVARGLHYLHKGCKRRIIHRDIKASNVLL----GPDFEPQITDFGLAKWLP--NKCTHH 405
+ G++YLH +I H D+K N++L P +I DFGLA + N+ +
Sbjct: 121 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN- 176
Query: 406 AAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPV--DSSRQNL 457
I GT ++APE + + + D+++ GV+ +++G P D+ ++ L
Sbjct: 177 ----IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 226
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 294 ELGIIGHVCHPNTATLVGCCIEN--GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV 351
E+ I+ + HPN TL EN + LI G L L ++ S + E + +
Sbjct: 64 EVSILKEIQHPNVITL-HEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF--L 120
Query: 352 LGVARGLHYLHKGCKRRIIHRDIKASNVLL----GPDFEPQITDFGLAKWLP--NKCTHH 405
+ G++YLH +I H D+K N++L P +I DFGLA + N+ +
Sbjct: 121 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN- 176
Query: 406 AAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPV--DSSRQNL 457
I GT ++APE + + + D+++ GV+ +++G P D+ ++ L
Sbjct: 177 ----IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 226
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 66/159 (41%), Gaps = 11/159 (6%)
Query: 292 LMELGIIGHVCHPNTATLVGCCIEN-GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKI 350
L E I+ V P L +N LY++ + G + + H R P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFY 146
Query: 351 VLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
+ YLH +I+RD+K N+L+ ++ DFG AK + + +
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX-----L 198
Query: 411 EGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
GT YLAPE + ++ D +A GVL+ E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 294 ELGIIGHVCHPNTATLVGCCIEN--GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV 351
E+ I+ + HPN TL EN + LI G L L ++ S + E + +
Sbjct: 63 EVSILKEIQHPNVITL-HEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF--L 119
Query: 352 LGVARGLHYLHKGCKRRIIHRDIKASNVLL----GPDFEPQITDFGLAKWLP--NKCTHH 405
+ G++YLH +I H D+K N++L P +I DFGLA + N+ +
Sbjct: 120 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN- 175
Query: 406 AAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPV--DSSRQNL 457
I GT ++APE + + + D+++ GV+ +++G P D+ ++ L
Sbjct: 176 ----IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 225
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 294 ELGIIGHVCHPNTATLVGCCIEN--GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV 351
E+ I+ + HPN TL EN + LI G L L ++ S + E + +
Sbjct: 64 EVSILKEIQHPNVITL-HEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF--L 120
Query: 352 LGVARGLHYLHKGCKRRIIHRDIKASNVLL----GPDFEPQITDFGLAKWLP--NKCTHH 405
+ G++YLH +I H D+K N++L P +I DFGLA + N+ +
Sbjct: 121 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN- 176
Query: 406 AAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPV--DSSRQNL 457
I GT ++APE + + + D+++ GV+ +++G P D+ ++ L
Sbjct: 177 ----IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 226
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 294 ELGIIGHVCHPNTATLVGCCIEN--GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV 351
E+ I+ + HPN TL EN + LI G L L ++ S + E + +
Sbjct: 63 EVSILKEIQHPNVITL-HEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF--L 119
Query: 352 LGVARGLHYLHKGCKRRIIHRDIKASNVLL----GPDFEPQITDFGLAKWLP--NKCTHH 405
+ G++YLH +I H D+K N++L P +I DFGLA + N+ +
Sbjct: 120 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN- 175
Query: 406 AAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPV--DSSRQNL 457
I GT ++APE + + + D+++ GV+ +++G P D+ ++ L
Sbjct: 176 ----IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 225
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 294 ELGIIGHVCHPNTATLVGCCIEN--GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV 351
E+ I+ + HPN TL EN + LI G L L ++ S + E + +
Sbjct: 64 EVSILKEIQHPNVITL-HEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF--L 120
Query: 352 LGVARGLHYLHKGCKRRIIHRDIKASNVLL----GPDFEPQITDFGLAKWLP--NKCTHH 405
+ G++YLH +I H D+K N++L P +I DFGLA + N+ +
Sbjct: 121 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN- 176
Query: 406 AAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPV--DSSRQNL 457
I GT ++APE + + + D+++ GV+ +++G P D+ ++ L
Sbjct: 177 ----IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 226
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 93/234 (39%), Gaps = 47/234 (20%)
Query: 245 TNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCH 303
++F ++GQG + +V K N D R A+K++ L E+ ++ + H
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLST---ILSEVXLLASLNH 61
Query: 304 PNTATLVGCCIE--------------NGLYLIFNFSQNGNLDAALHDE---RSKSLEWPI 346
+E + L++ + +N L +H E + + W
Sbjct: 62 QYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW-- 119
Query: 347 RYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAK---------- 396
++ + L Y+H + IIHR++K N+ + +I DFGLAK
Sbjct: 120 --RLFRQILEALSYIHS---QGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 397 ----WLPNKCTH-HAAIPIEGTFGYLAPEYF-MHGIIDEKTDVFAFGVLLLEII 444
LP + +AI GT Y+A E G +EK D ++ G++ E I
Sbjct: 175 LDSQNLPGSSDNLTSAI---GTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 19/102 (18%)
Query: 357 GLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLA------KWLPNKCTHHAAIPI 410
+ Y H+ +I+HRD+K N+LL + +I DFGL+ +L C
Sbjct: 120 AIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC-------- 168
Query: 411 EGTFGYLAPEYFMHGII-DEKTDVFAFGVLLLEIITGRKPVD 451
G+ Y APE + + DV++ G++L ++ GR P D
Sbjct: 169 -GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 294 ELGIIGHVCHPNTATLVGCCIEN--GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV 351
E+ I+ + HPN TL EN + LI G L L ++ S + E + +
Sbjct: 64 EVSILKEIQHPNVITL-HEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF--L 120
Query: 352 LGVARGLHYLHKGCKRRIIHRDIKASNVLL----GPDFEPQITDFGLAKWLP--NKCTHH 405
+ G++YLH +I H D+K N++L P +I DFGLA + N+ +
Sbjct: 121 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN- 176
Query: 406 AAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPV--DSSRQNL 457
I GT ++APE + + + D+++ GV+ +++G P D+ ++ L
Sbjct: 177 ----IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 226
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 294 ELGIIGHVCHPNTATLVGCCIEN--GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV 351
E+ I+ + HPN TL EN + LI G L L ++ S + E + +
Sbjct: 64 EVSILKEIQHPNVITL-HEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF--L 120
Query: 352 LGVARGLHYLHKGCKRRIIHRDIKASNVLL----GPDFEPQITDFGLAKWLP--NKCTHH 405
+ G++YLH +I H D+K N++L P +I DFGLA + N+ +
Sbjct: 121 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN- 176
Query: 406 AAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPV--DSSRQNL 457
I GT ++APE + + + D+++ GV+ +++G P D+ ++ L
Sbjct: 177 ----IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 226
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 98/232 (42%), Gaps = 29/232 (12%)
Query: 241 ISSATNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIG 299
+ + +++F ++++G+G Y V + G +A+K++ L E+ I+
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT-LREIKILK 64
Query: 300 HVCHPNTATLVGC----CIEN--GLYLIFNFSQNGNLDAALHDERSKSL--EWPIRYKIV 351
H H N T+ EN +Y+I Q LH S + + I+Y +
Sbjct: 65 HFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD-----LHRVISTQMLSDDHIQY-FI 118
Query: 352 LGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHA----- 406
R + LH +IHRD+K SN+L+ + + ++ DFGLA+ + ++
Sbjct: 119 YQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQ 175
Query: 407 ---AIPIEGTFGYLAPEYFMHGI-IDEKTDVFAFGVLLLEIITGRKPVDSSR 454
T Y APE + DV++ G +L E+ R+P+ R
Sbjct: 176 QSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGR 226
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 98/232 (42%), Gaps = 29/232 (12%)
Query: 241 ISSATNNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIG 299
+ + +++F ++++G+G Y V + G +A+K++ L E+ I+
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT-LREIKILK 64
Query: 300 HVCHPNTATLVGC----CIEN--GLYLIFNFSQNGNLDAALHDERSKSL--EWPIRYKIV 351
H H N T+ EN +Y+I Q LH S + + I+Y +
Sbjct: 65 HFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD-----LHRVISTQMLSDDHIQY-FI 118
Query: 352 LGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHA----- 406
R + LH +IHRD+K SN+L+ + + ++ DFGLA+ + ++
Sbjct: 119 YQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQ 175
Query: 407 ---AIPIEGTFGYLAPEYFMHGI-IDEKTDVFAFGVLLLEIITGRKPVDSSR 454
T Y APE + DV++ G +L E+ R+P+ R
Sbjct: 176 QSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGR 226
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 294 ELGIIGHVCHPNTATLVGCCIEN--GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV 351
E+ I+ + HPN TL EN + LI G L L ++ S + E + +
Sbjct: 64 EVSILKEIQHPNVITL-HEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF--L 120
Query: 352 LGVARGLHYLHKGCKRRIIHRDIKASNVLL----GPDFEPQITDFGLAKWLP--NKCTHH 405
+ G++YLH +I H D+K N++L P +I DFGLA + N+ +
Sbjct: 121 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN- 176
Query: 406 AAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPV--DSSRQNL 457
I GT ++APE + + + D+++ GV+ +++G P D+ ++ L
Sbjct: 177 ----IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 226
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 17/172 (9%)
Query: 294 ELGIIGHVCHPNTATLVGCCIEN--GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV 351
E+ I+ V H N TL EN + LI G L L + S S E + +
Sbjct: 65 EVSILRQVLHHNVITLHDVY-ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF--I 121
Query: 352 LGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEP----QITDFGLAKWLPNKCTHHAA 407
+ G++YLH ++I H D+K N++L P ++ DFGLA + +
Sbjct: 122 KQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN- 177
Query: 408 IPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPV--DSSRQNL 457
I GT ++APE + + + D+++ GV+ +++G P D+ ++ L
Sbjct: 178 --IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 227
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 17/172 (9%)
Query: 294 ELGIIGHVCHPNTATLVGCCIEN--GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV 351
E+ I+ V H N TL EN + LI G L L + S S E + +
Sbjct: 65 EVSILRQVLHHNVITLHDVY-ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF--I 121
Query: 352 LGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEP----QITDFGLAKWLPNKCTHHAA 407
+ G++YLH ++I H D+K N++L P ++ DFGLA + +
Sbjct: 122 KQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN- 177
Query: 408 IPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPV--DSSRQNL 457
I GT ++APE + + + D+++ GV+ +++G P D+ ++ L
Sbjct: 178 --IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 227
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 17/172 (9%)
Query: 294 ELGIIGHVCHPNTATLVGCCIEN--GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV 351
E+ I+ V H N TL EN + LI G L L + S S E + +
Sbjct: 65 EVSILRQVLHHNVITLHDVY-ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF--I 121
Query: 352 LGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEP----QITDFGLAKWLPNKCTHHAA 407
+ G++YLH ++I H D+K N++L P ++ DFGLA + +
Sbjct: 122 KQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN- 177
Query: 408 IPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPV--DSSRQNL 457
I GT ++APE + + + D+++ GV+ +++G P D+ ++ L
Sbjct: 178 --IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 227
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 85/229 (37%), Gaps = 39/229 (17%)
Query: 253 MVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVC-------HP 304
++ +GG++ VY+ ++ GR+ A+KRL II VC HP
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNR--------AIIQEVCFMKKLSGHP 86
Query: 305 NTATLVGCC--------IENGLYLIFNFSQNGNLDAALHDERSKS-LEWPIRYKIVLGVA 355
N +L+ G L L S+ L KI
Sbjct: 87 NIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTC 146
Query: 356 RGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNK-----CTHHAAIPI 410
R + ++H+ K IIHRD+K N+LL ++ DFG A + + A+
Sbjct: 147 RAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVE 205
Query: 411 EGTFGYLAPEYFMHGIID--------EKTDVFAFGVLLLEIITGRKPVD 451
E P Y IID EK D++A G +L + + P +
Sbjct: 206 EEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFE 254
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 17/172 (9%)
Query: 294 ELGIIGHVCHPNTATLVGCCIEN--GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV 351
E+ I+ V H N TL EN + LI G L L + S S E + +
Sbjct: 65 EVSILRQVLHHNVITLHDVY-ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF--I 121
Query: 352 LGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEP----QITDFGLAKWLPNKCTHHAA 407
+ G++YLH ++I H D+K N++L P ++ DFGLA + +
Sbjct: 122 KQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN- 177
Query: 408 IPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPV--DSSRQNL 457
I GT ++APE + + + D+++ GV+ +++G P D+ ++ L
Sbjct: 178 --IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 227
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 17/172 (9%)
Query: 294 ELGIIGHVCHPNTATLVGCCIEN--GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV 351
E+ I+ V H N TL EN + LI G L L + S S E + +
Sbjct: 65 EVSILRQVLHHNVITLHDVY-ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF--I 121
Query: 352 LGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEP----QITDFGLAKWLPNKCTHHAA 407
+ G++YLH ++I H D+K N++L P ++ DFGLA + +
Sbjct: 122 KQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN- 177
Query: 408 IPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPV--DSSRQNL 457
I GT ++APE + + + D+++ GV+ +++G P D+ ++ L
Sbjct: 178 --IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 227
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 357 GLHYLHKGCKRRIIHRDIKASNVLLGPDFEP--QITDFGLAKWLPNKCTHHAAIPIEGTF 414
G+ Y H +I HRD+K N LL P +I DFG +K + H GT
Sbjct: 128 GVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTP 181
Query: 415 GYLAPEYFMHGIIDEK-TDVFAFGVLLLEIITGRKPVDSSRQ 455
Y+APE + D K DV++ GV L ++ G P + +
Sbjct: 182 AYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEE 223
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 14/166 (8%)
Query: 316 NGLYLIFNFSQNGNL-DAALHDERSKSLEWPIRYK-IVLGVARGLHYLHKGCKRRIIHRD 373
N ++++ + G L D + +R E + ++ IV VA Y+H + HRD
Sbjct: 81 NKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVA----YVHS---QGYAHRD 133
Query: 374 IKASNVLLGPDFEPQITDFGL-AKWLPNKCTHHAAIPIEGTFGYLAPEYFM-HGIIDEKT 431
+K N+L + ++ DFGL AK NK H G+ Y APE + +
Sbjct: 134 LKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCC--GSLAYAAPELIQGKSYLGSEA 191
Query: 432 DVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPS 477
DV++ G+LL ++ G P D + L+ K + ++ + + PS
Sbjct: 192 DVWSMGILLYVLMCGFLPFDDDNV-MALYKKIMRGKYDVPKWLSPS 236
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 294 ELGIIGHVCHPNTATLVGCCIEN--GLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIV 351
E+ I+ + HPN TL EN + LI G L L ++ S + E + +
Sbjct: 64 EVSILKEIQHPNVITL-HEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEF--L 120
Query: 352 LGVARGLHYLHKGCKRRIIHRDIKASNVLL----GPDFEPQITDFGLAKWLP--NKCTHH 405
+ G++YLH +I H D+K N++L P +I DFGLA + N+ +
Sbjct: 121 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN- 176
Query: 406 AAIPIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKPV--DSSRQNL 457
I GT ++APE + + + D+++ GV+ +++G P D+ ++ L
Sbjct: 177 ----IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 226
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 78/204 (38%), Gaps = 14/204 (6%)
Query: 253 MVGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVG 311
++G+G + EV +K+ A+K L F E I + +
Sbjct: 82 VIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 141
Query: 312 CCIENG--LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRI 369
C ++ LY++ + G+L L +W Y V L +H +
Sbjct: 142 CAFQDDKYLYMVMEYMPGGDL-VNLMSNYDVPEKWAKFY--TAEVVLALDAIHS---MGL 195
Query: 370 IHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFM----HG 425
IHRD+K N+LL ++ DFG + H + GT Y++PE G
Sbjct: 196 IHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV-GTPDYISPEVLKSQGGDG 254
Query: 426 IIDEKTDVFAFGVLLLEIITGRKP 449
+ D ++ GV L E++ G P
Sbjct: 255 YYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 92/215 (42%), Gaps = 25/215 (11%)
Query: 247 NFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFL-MELGIIGHVCHP 304
N+ +G+G + +V + + G+K+A+K + + E+ + + HP
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 305 NTATLVGCCI-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHK 363
+ L ++ + ++ ++ N D + +R K E R + + + Y H+
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIV--QRDKMSEQEAR-RFFQQIISAVEYCHR 131
Query: 364 GCKRRIIHRDIKASNVLLGPDFEPQITDFGLA------KWLPNKCTHHAAIPIEGTFGYL 417
+I+HRD+K N+LL +I DFGL+ +L C G+ Y
Sbjct: 132 ---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---------GSPNYA 179
Query: 418 APEYFMHGII-DEKTDVFAFGVLLLEIITGRKPVD 451
APE + + DV++ GV+L ++ R P D
Sbjct: 180 APEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 92/215 (42%), Gaps = 25/215 (11%)
Query: 247 NFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFL-MELGIIGHVCHP 304
N+ +G+G + +V + + G+K+A+K + + E+ + + HP
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 305 NTATLVGCCI-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHK 363
+ L ++ + ++ ++ N D + +R K E R + + + Y H+
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIV--QRDKMSEQEAR-RFFQQIISAVEYCHR 130
Query: 364 GCKRRIIHRDIKASNVLLGPDFEPQITDFGLA------KWLPNKCTHHAAIPIEGTFGYL 417
+I+HRD+K N+LL +I DFGL+ +L C G+ Y
Sbjct: 131 ---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---------GSPNYA 178
Query: 418 APEYFMHGII-DEKTDVFAFGVLLLEIITGRKPVD 451
APE + + DV++ GV+L ++ R P D
Sbjct: 179 APEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 69/147 (46%), Gaps = 22/147 (14%)
Query: 318 LYLIFNFSQNGNLDAALHDERS-KSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKA 376
YL+F + G++ + +H R LE + +V VA L +LH + I HRD+K
Sbjct: 86 FYLVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVASALDFLHN---KGIAHRDLKP 139
Query: 377 SNVLL-GPD-FEP-QITDFGLAKW--LPNKC----THHAAIPIEGTFGYLAPEYF----- 422
N+L P+ P +I DF L L C T P G+ Y+APE
Sbjct: 140 ENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPC-GSAEYMAPEVVEAFSE 198
Query: 423 MHGIIDEKTDVFAFGVLLLEIITGRKP 449
I D++ D+++ GV+L +++G P
Sbjct: 199 EASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 88/211 (41%), Gaps = 32/211 (15%)
Query: 254 VGQGGYSEVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVC----------H 303
VG G +V K L+ G K+AVK L + L ++G + H
Sbjct: 26 VGTFGKVKVGKHELT-GHKVAVKILNRQK---------IRSLDVVGKIRREIQNLKLFRH 75
Query: 304 PNTATLVGCC-IENGLYLIFNFSQNGNL-DAALHDERSKSLEWPIRYKIVLGVARGLHYL 361
P+ L + ++++ + G L D + R E ++ +L G+ Y
Sbjct: 76 PHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILS---GVDYC 132
Query: 362 HKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEY 421
H+ ++HRD+K NVLL +I DFGL+ + + + G+ Y APE
Sbjct: 133 HR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---GSPNYAAPEV 186
Query: 422 FMHGII-DEKTDVFAFGVLLLEIITGRKPVD 451
+ + D+++ GV+L ++ G P D
Sbjct: 187 ISGRLYAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 92/215 (42%), Gaps = 25/215 (11%)
Query: 247 NFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFL-MELGIIGHVCHP 304
N+ +G+G + +V + + G+K+A+K + + E+ + + HP
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 305 NTATLVGCCI-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHK 363
+ L ++ + ++ ++ N D + +R K E R + + + Y H+
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIV--QRDKMSEQEAR-RFFQQIISAVEYCHR 121
Query: 364 GCKRRIIHRDIKASNVLLGPDFEPQITDFGLA------KWLPNKCTHHAAIPIEGTFGYL 417
+I+HRD+K N+LL +I DFGL+ +L C G+ Y
Sbjct: 122 ---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---------GSPNYA 169
Query: 418 APEYFMHGII-DEKTDVFAFGVLLLEIITGRKPVD 451
APE + + DV++ GV+L ++ R P D
Sbjct: 170 APEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 92/215 (42%), Gaps = 25/215 (11%)
Query: 247 NFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFL-MELGIIGHVCHP 304
N+ +G+G + +V + + G+K+A+K + + E+ + + HP
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 305 NTATLVGCCI-ENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHK 363
+ L ++ + ++ ++ N D + +R K E R + + + Y H+
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIV--QRDKMSEQEAR-RFFQQIISAVEYCHR 125
Query: 364 GCKRRIIHRDIKASNVLLGPDFEPQITDFGLA------KWLPNKCTHHAAIPIEGTFGYL 417
+I+HRD+K N+LL +I DFGL+ +L C G+ Y
Sbjct: 126 ---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---------GSPNYA 173
Query: 418 APEYFMHGII-DEKTDVFAFGVLLLEIITGRKPVD 451
APE + + DV++ GV+L ++ R P D
Sbjct: 174 APEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 78/177 (44%), Gaps = 23/177 (12%)
Query: 246 NNFHSENMVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHP 304
+ + +++G G Y V + + + R +A+K++ L E+ I+ + H
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 305 NTATLVGCCIE------NGLYLIF-----NFSQNGNLDAALHDERSKSLEWPIRYKIVLG 353
+ ++ I + LY++ +F + L + K+L Y +++G
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTL----LYNLLVG 168
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPI 410
V Y+H I+HRD+K +N L+ D ++ DFGLA+ + ++ +PI
Sbjct: 169 VK----YVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPI 218
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 357 GLHYLHKGCKRRIIHRDIKASNVLLGPDFEP--QITDFGLAKWLPNKCTHHAAIPIEGTF 414
G+ Y H ++ HRD+K N LL P +I DFG +K + H GT
Sbjct: 127 GVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTP 180
Query: 415 GYLAPEYFMHGIIDEKT-DVFAFGVLLLEIITGRKPVDSSRQ 455
Y+APE + D K DV++ GV L ++ G P + +
Sbjct: 181 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEE 222
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 14/138 (10%)
Query: 316 NGLYLIFNFSQNG-NLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDI 374
NG++++ F G NL A + + + +I + GL Y+H+ C IIH DI
Sbjct: 101 NGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG--IIHTDI 158
Query: 375 KASNVLL----GPD--FEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIID 428
K NVL+ P+ + +I D G A W T+ T Y +PE +
Sbjct: 159 KPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQ-----TREYRSPEVLLGAPWG 213
Query: 429 EKTDVFAFGVLLLEIITG 446
D+++ L+ E+ITG
Sbjct: 214 CGADIWSTACLIFELITG 231
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 10/139 (7%)
Query: 318 LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKAS 377
L +I + G L + + + ++ +I+ + + +LH I HRD+K
Sbjct: 82 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPE 138
Query: 378 NVLLG---PDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVF 434
N+L D ++TDFG AK + T +A T Y+APE D+ D++
Sbjct: 139 NLLYTSKEKDAVLKLTDFGFAK----ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMW 194
Query: 435 AFGVLLLEIITGRKPVDSS 453
+ GV++ ++ G P S+
Sbjct: 195 SLGVIMYILLCGFPPFYSN 213
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 10/139 (7%)
Query: 318 LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKAS 377
L +I + G L + + + ++ +I+ + + +LH I HRD+K
Sbjct: 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPE 157
Query: 378 NVLLG---PDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVF 434
N+L D ++TDFG AK + T +A T Y+APE D+ D++
Sbjct: 158 NLLYTSKEKDAVLKLTDFGFAK----ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMW 213
Query: 435 AFGVLLLEIITGRKPVDSS 453
+ GV++ ++ G P S+
Sbjct: 214 SLGVIMYILLCGFPPFYSN 232
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 14/138 (10%)
Query: 316 NGLYLIFNFSQNG-NLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDI 374
NG++++ F G NL A + + + +I + GL Y+H+ C IIH DI
Sbjct: 101 NGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG--IIHTDI 158
Query: 375 KASNVLL----GPD--FEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIID 428
K NVL+ P+ + +I D G A W T+ T Y +PE +
Sbjct: 159 KPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQ-----TREYRSPEVLLGAPWG 213
Query: 429 EKTDVFAFGVLLLEIITG 446
D+++ L+ E+ITG
Sbjct: 214 CGADIWSTACLIFELITG 231
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 9/139 (6%)
Query: 318 LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKAS 377
L ++ G L + + D ++ +I + + YLH I HRD+K
Sbjct: 134 LLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSI---NIAHRDVKPE 190
Query: 378 NVLLG---PDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKTDVF 434
N+L P+ ++TDFG AK +H++ T Y+APE D+ D +
Sbjct: 191 NLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXW 247
Query: 435 AFGVLLLEIITGRKPVDSS 453
+ GV+ ++ G P S+
Sbjct: 248 SLGVIXYILLCGYPPFYSN 266
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 357 GLHYLHKGCKRRIIHRDIKASNVLLGPDFEP--QITDFGLAKWLPNKCTHHAAIPIEGTF 414
G+ Y H ++ HRD+K N LL P +I DFG +K + H GT
Sbjct: 126 GVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTP 179
Query: 415 GYLAPEYFMHGIIDEKT-DVFAFGVLLLEIITGRKPVDSSRQ 455
Y+APE + D K DV++ GV L ++ G P + +
Sbjct: 180 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEE 221
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 107/245 (43%), Gaps = 34/245 (13%)
Query: 254 VGQGGYSEVYKGNLSD-GRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATL--- 309
+G GG V+ +D +++A+K++ L E+ II + H N +
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHA--LREIKIIRRLDHDNIVKVFEI 76
Query: 310 -----------VGCCIE-NGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARG 357
VG E N +Y++ + + D A E+ LE R + + RG
Sbjct: 77 LGPSGSQLTDDVGSLTELNSVYIVQEYMET---DLANVLEQGPLLEEHARL-FMYQLLRG 132
Query: 358 LHYLHKGCKRRIIHRDIKASNVLLGP-DFEPQITDFGLAKWLPNKCTHHAAIPIEG--TF 414
L Y+H ++HRD+K +N+ + D +I DFGLA+ + +H + EG T
Sbjct: 133 LKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLS-EGLVTK 188
Query: 415 GYLAPEYFMH-GIIDEKTDVFAFGVLLLEIITGRKPVDSSRQ----NLVLWAKPLMESGN 469
Y +P + + D++A G + E++TG+ + + L+L + P++ +
Sbjct: 189 WYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEED 248
Query: 470 LTELV 474
EL+
Sbjct: 249 RQELL 253
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 112/271 (41%), Gaps = 27/271 (9%)
Query: 254 VGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G GG S+V++ L++ ++I A+K + + E+ + + + +
Sbjct: 64 IGSGGSSKVFQV-LNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 313 CIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHR 372
E I+ + GN+D ++ KS++ R + +H +H+ I+H
Sbjct: 123 DYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHS 179
Query: 373 DIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF---------- 422
D+K +N L+ D ++ DFG+A + T GT Y+ PE
Sbjct: 180 DLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENG 238
Query: 423 -MHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEGE 481
I K+DV++ G +L + G+ P + + + + L ++DP+ E E
Sbjct: 239 KSKSKISPKSDVWSLGCILYYMTYGKTP----------FQQIINQISKLHAIIDPNHEIE 288
Query: 482 YDTDQMHRLVLIADYCVRQTSAWRPSMSEVL 512
+ L + C+++ R S+ E+L
Sbjct: 289 FPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 112/271 (41%), Gaps = 27/271 (9%)
Query: 254 VGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G GG S+V++ L++ ++I A+K + + E+ + + + +
Sbjct: 64 IGSGGSSKVFQV-LNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 313 CIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHR 372
E I+ + GN+D ++ KS++ R + +H +H+ I+H
Sbjct: 123 DYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHS 179
Query: 373 DIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF---------- 422
D+K +N L+ D ++ DFG+A + T GT Y+ PE
Sbjct: 180 DLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENG 238
Query: 423 -MHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEGE 481
I K+DV++ G +L + G+ P + + + + L ++DP+ E E
Sbjct: 239 KSKSKISPKSDVWSLGCILYYMTYGKTP----------FQQIINQISKLHAIIDPNHEIE 288
Query: 482 YDTDQMHRLVLIADYCVRQTSAWRPSMSEVL 512
+ L + C+++ R S+ E+L
Sbjct: 289 FPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 14/122 (11%)
Query: 329 NLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEP- 387
NL + + + P+ K + + L LHK RIIH D+K N+LL
Sbjct: 184 NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSG 240
Query: 388 -QITDFGLAKWLPNKCTHHAAI--PIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEII 444
++ DFG + C H + I+ F Y APE + D+++ G +L E++
Sbjct: 241 IKVIDFG------SSCYEHQRVYTXIQSRF-YRAPEVILGARYGMPIDMWSLGCILAELL 293
Query: 445 TG 446
TG
Sbjct: 294 TG 295
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 14/122 (11%)
Query: 329 NLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEP- 387
NL + + + P+ K + + L LHK RIIH D+K N+LL
Sbjct: 184 NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSG 240
Query: 388 -QITDFGLAKWLPNKCTHHAAI--PIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEII 444
++ DFG + C H + I+ F Y APE + D+++ G +L E++
Sbjct: 241 IKVIDFG------SSCYEHQRVYXXIQSRF-YRAPEVILGARYGMPIDMWSLGCILAELL 293
Query: 445 TG 446
TG
Sbjct: 294 TG 295
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 14/122 (11%)
Query: 329 NLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEP- 387
NL + + + P+ K + + L LHK RIIH D+K N+LL
Sbjct: 184 NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSG 240
Query: 388 -QITDFGLAKWLPNKCTHHAAI--PIEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEII 444
++ DFG + C H + I+ F Y APE + D+++ G +L E++
Sbjct: 241 IKVIDFG------SSCYEHQRVYTXIQSRF-YRAPEVILGARYGMPIDMWSLGCILAELL 293
Query: 445 TG 446
TG
Sbjct: 294 TG 295
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 11/138 (7%)
Query: 315 ENGLYLIFNFSQNGNLDAALHDERSK-SLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRD 373
+N + +I+ F G L + DE +K S + + Y + V +GL ++H+ +H D
Sbjct: 226 DNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEY--MRQVCKGLCHMHEN---NYVHLD 280
Query: 374 IKASNVLLGPDF--EPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIIDEKT 431
+K N++ E ++ DFGL L K + GT + APE + T
Sbjct: 281 LKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGYYT 337
Query: 432 DVFAFGVLLLEIITGRKP 449
D+++ GVL +++G P
Sbjct: 338 DMWSVGVLSYILLSGLSP 355
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 12/160 (7%)
Query: 294 ELGIIGHVCHPNTATLVGCC-IENGLYLIFNFSQNGNLDAALHDERSK-SLEWPIRYKIV 351
E+ + + HP L +N + +I+ F G L + DE +K S + + Y +
Sbjct: 98 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEY--M 155
Query: 352 LGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDF--EPQITDFGLAKWLPNKCTHHAAIP 409
V +GL ++H+ +H D+K N++ E ++ DFGL L K +
Sbjct: 156 RQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT- 211
Query: 410 IEGTFGYLAPEYFMHGIIDEKTDVFAFGVLLLEIITGRKP 449
GT + APE + TD+++ GVL +++G P
Sbjct: 212 --GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 249
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 20/120 (16%)
Query: 357 GLHYLHKGCKRRIIHRDIKASNVLLG-PD----FEPQITDFGLAKWLP---NKCTHHAAI 408
GL +LH I+HRD+K N+L+ P+ + I+DFGL K L + + + +
Sbjct: 130 GLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGV 186
Query: 409 PIEGTFGYLAPEYFMHGIIDEKT---DVFAFGVLLLEIIT-GRKPVDSSRQ---NLVLWA 461
P GT G++APE + T D+F+ G + +I+ G P S Q N++L A
Sbjct: 187 P--GTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGA 244
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 17/95 (17%)
Query: 365 CKRR-IIHRDIKASNVLLGPDFEPQITDFGLA------KWLPNKCTHHAAIPIEGTFGYL 417
C R ++HRD+K NVLL +I DFGL+ ++L + C G+ Y
Sbjct: 127 CHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC---------GSPNYA 177
Query: 418 APEYFMHGII-DEKTDVFAFGVLLLEIITGRKPVD 451
APE + + D+++ GV+L ++ G P D
Sbjct: 178 APEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 112/271 (41%), Gaps = 27/271 (9%)
Query: 254 VGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G GG S+V++ L++ ++I A+K + + E+ + + + +
Sbjct: 17 IGSGGSSKVFQV-LNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 75
Query: 313 CIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHR 372
E I+ + GN+D ++ KS++ R + +H +H+ I+H
Sbjct: 76 DYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHS 132
Query: 373 DIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF---------- 422
D+K +N L+ D ++ DFG+A + T GT Y+ PE
Sbjct: 133 DLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENG 191
Query: 423 -MHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEGE 481
I K+DV++ G +L + G+ P + + + + L ++DP+ E E
Sbjct: 192 KSKSKISPKSDVWSLGCILYYMTYGKTP----------FQQIINQISKLHAIIDPNHEIE 241
Query: 482 YDTDQMHRLVLIADYCVRQTSAWRPSMSEVL 512
+ L + C+++ R S+ E+L
Sbjct: 242 FPDIPEKDLQDVLKCCLKRDPKQRISIPELL 272
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 357 GLHYLHKGCKRRIIHRDIKASNVLLGPDFEP--QITDFGLAKWLPNKCTHHAAIPIEGTF 414
G+ Y H ++ HRD+K N LL P +I DFG +K H GT
Sbjct: 127 GVSYAHA---MQVAHRDLKLENTLLDGSPAPRLKIADFGYSK---ASVLHSQPKSAVGTP 180
Query: 415 GYLAPEYFMHGIIDEKT-DVFAFGVLLLEIITGRKPVDSSRQ 455
Y+APE + D K DV++ GV L ++ G P + +
Sbjct: 181 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEE 222
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 13/158 (8%)
Query: 246 NNFHSENMVGQGGYSEVYKGNLSDGRK-IAVKRLXXXXXXXXXXXXFLMELGIIGHVCHP 304
+N+ ++++G+G Y VY + K +A+K++ L E+ I+ +
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 305 NTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYK------IVLGVARGL 358
L I L F + + + K + PI I+ + G
Sbjct: 88 YIIRLHDLIIPEDL---LKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGE 144
Query: 359 HYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAK 396
++H+ IIHRD+K +N LL D +I DFGLA+
Sbjct: 145 KFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLAR 179
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 17/95 (17%)
Query: 365 CKRR-IIHRDIKASNVLLGPDFEPQITDFGLA------KWLPNKCTHHAAIPIEGTFGYL 417
C R ++HRD+K NVLL +I DFGL+ ++L C G+ Y
Sbjct: 127 CHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---------GSPNYA 177
Query: 418 APEYFMHGII-DEKTDVFAFGVLLLEIITGRKPVD 451
APE + + D+++ GV+L ++ G P D
Sbjct: 178 APEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 13/158 (8%)
Query: 246 NNFHSENMVGQGGYSEVYKGNLSDGRK-IAVKRLXXXXXXXXXXXXFLMELGIIGHVCHP 304
+N+ ++++G+G Y VY + K +A+K++ L E+ I+ +
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 85
Query: 305 NTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYK------IVLGVARGL 358
L I + L F + + + K + PI I+ + G
Sbjct: 86 YIIRLYDLIIPDDL---LKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGE 142
Query: 359 HYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAK 396
+++H+ IIHRD+K +N LL D ++ DFGLA+
Sbjct: 143 NFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLAR 177
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 112/271 (41%), Gaps = 27/271 (9%)
Query: 254 VGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G GG S+V++ L++ ++I A+K + + E+ + + + +
Sbjct: 36 IGSGGSSKVFQV-LNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 94
Query: 313 CIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHR 372
E I+ + GN+D ++ KS++ R + +H +H+ I+H
Sbjct: 95 DYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHS 151
Query: 373 DIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF---------- 422
D+K +N L+ D ++ DFG+A + T GT Y+ PE
Sbjct: 152 DLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENG 210
Query: 423 -MHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEGE 481
I K+DV++ G +L + G+ P + + + + L ++DP+ E E
Sbjct: 211 KSKSKISPKSDVWSLGCILYYMTYGKTP----------FQQIINQISKLHAIIDPNHEIE 260
Query: 482 YDTDQMHRLVLIADYCVRQTSAWRPSMSEVL 512
+ L + C+++ R S+ E+L
Sbjct: 261 FPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 112/271 (41%), Gaps = 27/271 (9%)
Query: 254 VGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G GG S+V++ L++ ++I A+K + + E+ + + + +
Sbjct: 20 IGSGGSSKVFQV-LNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 78
Query: 313 CIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHR 372
E I+ + GN+D ++ KS++ R + +H +H+ I+H
Sbjct: 79 DYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHS 135
Query: 373 DIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF---------- 422
D+K +N L+ D ++ DFG+A + T GT Y+ PE
Sbjct: 136 DLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENG 194
Query: 423 -MHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEGE 481
I K+DV++ G +L + G+ P + + + + L ++DP+ E E
Sbjct: 195 KSKSKISPKSDVWSLGCILYYMTYGKTP----------FQQIINQISKLHAIIDPNHEIE 244
Query: 482 YDTDQMHRLVLIADYCVRQTSAWRPSMSEVL 512
+ L + C+++ R S+ E+L
Sbjct: 245 FPDIPEKDLQDVLKCCLKRDPKQRISIPELL 275
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 87/213 (40%), Gaps = 19/213 (8%)
Query: 246 NNFHSENMVGQGGYSEVYKGN-LSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHP 304
+ F E M GQG + V G S G +A+K++ + +L ++ H P
Sbjct: 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHH---P 79
Query: 305 NTATL------VGCCIENGLYL--IFNFSQNGNLDAALHDERSKSLEWPIRYKIVL-GVA 355
N L +G +YL + + + + R + PI K+ L +
Sbjct: 80 NIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLI 139
Query: 356 RGLHYLHKGCKRRIIHRDIKASNVLLG-PDFEPQITDFGLAKWLPNKCTHHAAIPIEGTF 414
R + LH + HRDIK NVL+ D ++ DFG AK L + A I +
Sbjct: 140 RSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYI---CSR 195
Query: 415 GYLAPEY-FMHGIIDEKTDVFAFGVLLLEIITG 446
Y APE F + D+++ G + E++ G
Sbjct: 196 YYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 107/268 (39%), Gaps = 30/268 (11%)
Query: 261 EVYKGNLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCCIENGL-- 318
E++KG G I VK L F E + HPN ++G C
Sbjct: 25 ELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPH 83
Query: 319 -YLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKAS 377
LI ++ G+L LH+ + ++ K L +ARG+ +LH + I + +
Sbjct: 84 PTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT-LEPLIPRHALNSR 142
Query: 378 NVLLGPDFEPQIT--DFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFMHGIID---EKTD 432
+V++ D +I+ D + P + A ++APE D D
Sbjct: 143 SVMIDEDMTARISMADVKFSFQSPGRMYAPA---------WVAPEALQKKPEDTNRRSAD 193
Query: 433 VFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEGEYDTDQMHRLVL 492
+++F VLL E++T P + N+ + K +E L + P + + + +L+
Sbjct: 194 MWSFAVLLWELVTREVPF-ADLSNMEIGMKVALEG--LRPTIPPGI-----SPHVSKLMK 245
Query: 493 IADYCVRQTSAWRPSMSEVLELLTSGHD 520
I C+ + A RP ++ +L D
Sbjct: 246 I---CMNEDPAKRPKFDMIVPILEKMQD 270
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 112/271 (41%), Gaps = 27/271 (9%)
Query: 254 VGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G GG S+V++ L++ ++I A+K + + E+ + + + +
Sbjct: 16 IGSGGSSKVFQV-LNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 74
Query: 313 CIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHR 372
E I+ + GN+D ++ KS++ R + +H +H+ I+H
Sbjct: 75 DYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHS 131
Query: 373 DIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF---------- 422
D+K +N L+ D ++ DFG+A + T GT Y+ PE
Sbjct: 132 DLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENG 190
Query: 423 -MHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNLVLWAKPLMESGNLTELVDPSLEGE 481
I K+DV++ G +L + G+ P + + + + L ++DP+ E E
Sbjct: 191 KSKSKISPKSDVWSLGCILYYMTYGKTP----------FQQIINQISKLHAIIDPNHEIE 240
Query: 482 YDTDQMHRLVLIADYCVRQTSAWRPSMSEVL 512
+ L + C+++ R S+ E+L
Sbjct: 241 FPDIPEKDLQDVLKCCLKRDPKQRISIPELL 271
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 85/219 (38%), Gaps = 18/219 (8%)
Query: 240 EISSATNNFHSENMVGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLME-LGI 297
++ ++ ++G+G + EV RK+ A+K L F E I
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 298 IGHVCHPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRY--KIVLGV 354
+ P L ++ LY++ + G+L L +W Y ++VL +
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDL-VNLMSNYDVPEKWARFYTAEVVLAL 186
Query: 355 ARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTF 414
+H + IHRD+K N+LL ++ DFG + + + GT
Sbjct: 187 D-AIHSMG------FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTP 238
Query: 415 GYLAPEYFM----HGIIDEKTDVFAFGVLLLEIITGRKP 449
Y++PE G + D ++ GV L E++ G P
Sbjct: 239 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 85/219 (38%), Gaps = 18/219 (8%)
Query: 240 EISSATNNFHSENMVGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLME-LGI 297
++ ++ ++G+G + EV RK+ A+K L F E I
Sbjct: 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 122
Query: 298 IGHVCHPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRY--KIVLGV 354
+ P L ++ LY++ + G+L L +W Y ++VL +
Sbjct: 123 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDL-VNLMSNYDVPEKWARFYTAEVVLAL 181
Query: 355 ARGLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTF 414
+H + IHRD+K N+LL ++ DFG + + + GT
Sbjct: 182 D-AIHSMG------FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTP 233
Query: 415 GYLAPEYFM----HGIIDEKTDVFAFGVLLLEIITGRKP 449
Y++PE G + D ++ GV L E++ G P
Sbjct: 234 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 81/217 (37%), Gaps = 14/217 (6%)
Query: 240 EISSATNNFHSENMVGQGGYSEVYKGNLSDGRKI-AVKRLXXXXXXXXXXXXFLME-LGI 297
++ ++ ++G+G + EV RK+ A+K L F E I
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 298 IGHVCHPNTATLVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVAR 356
+ P L ++ LY++ + G+L L +W Y V
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDL-VNLMSNYDVPEKWARFY--TAEVVL 184
Query: 357 GLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGY 416
L +H IHRD+K N+LL ++ DFG + + + GT Y
Sbjct: 185 ALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDY 240
Query: 417 LAPEYFM----HGIIDEKTDVFAFGVLLLEIITGRKP 449
++PE G + D ++ GV L E++ G P
Sbjct: 241 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 357 GLHYLHKGCKRRIIHRDIKASNVLLGPDFEP--QITDFGLAKWLPNKCTHHAAIPIEGTF 414
G+ Y H ++ HRD+K N LL P +I FG +K + H GT
Sbjct: 127 GVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKSTVGTP 180
Query: 415 GYLAPEYFMHGIIDEKT-DVFAFGVLLLEIITGRKPVDSSRQ 455
Y+APE + D K DV++ GV L ++ G P + +
Sbjct: 181 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEE 222
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 83/207 (40%), Gaps = 21/207 (10%)
Query: 258 GYSEVYKGNLS----DGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
G+ ++ NL+ G + V+R+ EL + HPN
Sbjct: 36 GFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATF 95
Query: 314 I-ENGLYLIFNFSQNGNLDAALHDERSKSL-EWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
I +N L+++ +F G+ + + E I Y I+ GV + L Y+H +H
Sbjct: 96 IADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAY-ILQGVLKALDYIHH---MGYVH 151
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLP-------NKCTHHAAIPIEGTFGYLAPEYFMH 424
R +KAS++L+ D + ++ GL L + H +L+PE
Sbjct: 152 RSVKASHILISVDGKVYLS--GLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQ 209
Query: 425 GI--IDEKTDVFAFGVLLLEIITGRKP 449
+ D K+D+++ G+ E+ G P
Sbjct: 210 NLQGYDAKSDIYSVGITACELANGHVP 236
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 83/207 (40%), Gaps = 21/207 (10%)
Query: 258 GYSEVYKGNLS----DGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGCC 313
G+ ++ NL+ G + V+R+ EL + HPN
Sbjct: 20 GFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATF 79
Query: 314 I-ENGLYLIFNFSQNGNLDAALHDERSKSL-EWPIRYKIVLGVARGLHYLHKGCKRRIIH 371
I +N L+++ +F G+ + + E I Y I+ GV + L Y+H +H
Sbjct: 80 IADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAY-ILQGVLKALDYIHH---MGYVH 135
Query: 372 RDIKASNVLLGPDFEPQITDFGLAKWLP-------NKCTHHAAIPIEGTFGYLAPEYFMH 424
R +KAS++L+ D + ++ GL L + H +L+PE
Sbjct: 136 RSVKASHILISVDGKVYLS--GLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQ 193
Query: 425 GI--IDEKTDVFAFGVLLLEIITGRKP 449
+ D K+D+++ G+ E+ G P
Sbjct: 194 NLQGYDAKSDIYSVGITACELANGHVP 220
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 357 GLHYLHKGCKRRIIHRDIKASNVLLGPDFEP--QITDFGLAKWLPNKCTHHAAIPIEGTF 414
G+ Y H ++ HRD+K N LL P +I FG +K + H GT
Sbjct: 127 GVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKDTVGTP 180
Query: 415 GYLAPEYFMHGIIDEKT-DVFAFGVLLLEIITGRKPVDSSRQ 455
Y+APE + D K DV++ GV L ++ G P + +
Sbjct: 181 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEE 222
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 109/263 (41%), Gaps = 45/263 (17%)
Query: 217 RKRNGSLSNKEKHQPLLTCFSYEEISSATNNFHSENMVGQGGY-SEVYKGNLSDGRKIAV 275
RKR K + + ++E+ S N SE ++G G + V++G+ GR +AV
Sbjct: 6 RKRGSRGGKKGRKSRIANIPNFEQ--SLKNLVVSEKILGYGSSGTVVFQGSFQ-GRPVAV 62
Query: 276 KRLXXXXXXXXXXXXFLMELGIIGHVC-HPNTATLVGCCIENG---LYLIFNFSQNGNLD 331
KR+ LME+ ++ HPN C E LY+ N NL
Sbjct: 63 KRMLIDFCDIA-----LMEIKLLTESDDHPNVIRYY--CSETTDRFLYIALELC-NLNLQ 114
Query: 332 AALHDER--SKSLEWPIRYK---IVLGVARGLHYLHKGCKRRIIHRDIKASNVLL----- 381
+ + ++L+ Y ++ +A G+ +LH +IIHRD+K N+L+
Sbjct: 115 DLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSR 171
Query: 382 --------GPDFEPQITDFGLAKWLPN---KCTHHAAIPIEGTFGYLAPEYFMHGI---I 427
+ I+DFGL K L + + P GT G+ APE +
Sbjct: 172 FTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNP-SGTSGWRAPELLEESTKRRL 230
Query: 428 DEKTDVFAFGVLLLEIIT-GRKP 449
D+F+ G + I++ G+ P
Sbjct: 231 TRSIDIFSMGCVFYYILSKGKHP 253
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 340 KSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLL 381
+ L P KI+ V +GL YLH C RIIH DIK N+LL
Sbjct: 141 QGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILL 180
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 109/263 (41%), Gaps = 45/263 (17%)
Query: 217 RKRNGSLSNKEKHQPLLTCFSYEEISSATNNFHSENMVGQGGY-SEVYKGNLSDGRKIAV 275
RKR K + + ++E+ S N SE ++G G + V++G+ GR +AV
Sbjct: 6 RKRGSRGGKKGRKSRIANIPNFEQ--SLKNLVVSEKILGYGSSGTVVFQGSFQ-GRPVAV 62
Query: 276 KRLXXXXXXXXXXXXFLMELGIIGHVC-HPNTATLVGCCIENG---LYLIFNFSQNGNLD 331
KR+ LME+ ++ HPN C E LY+ N NL
Sbjct: 63 KRMLIDFCDIA-----LMEIKLLTESDDHPNVIRYY--CSETTDRFLYIALELC-NLNLQ 114
Query: 332 AALHDER--SKSLEWPIRYK---IVLGVARGLHYLHKGCKRRIIHRDIKASNVLL----- 381
+ + ++L+ Y ++ +A G+ +LH +IIHRD+K N+L+
Sbjct: 115 DLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSR 171
Query: 382 --------GPDFEPQITDFGLAKWLPN---KCTHHAAIPIEGTFGYLAPEYFMHGI---I 427
+ I+DFGL K L + + P GT G+ APE +
Sbjct: 172 FTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNP-SGTSGWRAPELLEESTKRRL 230
Query: 428 DEKTDVFAFGVLLLEIIT-GRKP 449
D+F+ G + I++ G+ P
Sbjct: 231 TRSIDIFSMGCVFYYILSKGKHP 253
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 316 NGLYLIFNFSQNGN-LDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDI 374
NG ++ F G+ L + + L P KI+ V +GL YLH C RIIH DI
Sbjct: 100 NGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDI 157
Query: 375 KASNVLL 381
K N+LL
Sbjct: 158 KPENILL 164
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 88/215 (40%), Gaps = 15/215 (6%)
Query: 253 MVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXX---XXXXFLMELGIIGHVCHPNTAT 308
++G+G +S V + N G++ AVK + E I + HP+
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 92
Query: 309 LVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEW--PIRYKIVLGVARGLHYLHKGC 365
L+ +G LY++F F +L + + + + + L Y H
Sbjct: 93 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN- 151
Query: 366 KRRIIHRDIKASNVLLGP--DFEP-QITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF 422
IIHRD+K VLL + P ++ FG+A L + A GT ++APE
Sbjct: 152 --NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE--SGLVAGGRVGTPHFMAPEVV 207
Query: 423 MHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNL 457
+ DV+ GV+L +++G P +++ L
Sbjct: 208 KREPYGKPVDVWGCGVILFILLSGCLPFYGTKERL 242
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 101/231 (43%), Gaps = 25/231 (10%)
Query: 254 VGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXXXXFLMELGIIGHVCHPNTATLVGC 312
+G+G YSEV++ N+++ K+ VK L ++E G PN TL
Sbjct: 45 LGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKREIKILENLRGG----PNIITLADI 100
Query: 313 C---IENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRI 369
+ L+F N + ++ IR+ + + + L Y H I
Sbjct: 101 VKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRF-YMYEILKALDYCHSMG---I 152
Query: 370 IHRDIKASNVLLGPDFEP-QITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYFM-HGII 427
+HRD+K NV++ + ++ D+GLA++ ++ + + + PE + + +
Sbjct: 153 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV---ASRYFKGPELLVDYQMY 209
Query: 428 DEKTDVFAFGVLLLEIITGRKPVDSSRQN---LVLWAKPLMESGNLTELVD 475
D D+++ G +L +I ++P N LV AK ++ + +L + +D
Sbjct: 210 DYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK-VLGTEDLYDYID 259
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 88/215 (40%), Gaps = 15/215 (6%)
Query: 253 MVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXX---XXXXFLMELGIIGHVCHPNTAT 308
++G+G +S V + N G++ AVK + E I + HP+
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 309 LVGCCIENG-LYLIFNFSQNGNLDAALHDERSKSLEW--PIRYKIVLGVARGLHYLHKGC 365
L+ +G LY++F F +L + + + + + L Y H
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN- 149
Query: 366 KRRIIHRDIKASNVLLGP--DFEP-QITDFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF 422
IIHRD+K VLL + P ++ FG+A L + A GT ++APE
Sbjct: 150 --NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE--SGLVAGGRVGTPHFMAPEVV 205
Query: 423 MHGIIDEKTDVFAFGVLLLEIITGRKPVDSSRQNL 457
+ DV+ GV+L +++G P +++ L
Sbjct: 206 KREPYGKPVDVWGCGVILFILLSGCLPFYGTKERL 240
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Query: 357 GLHYLHKGCKRRIIHRDIKASNVLLGPDFEPQITDFGLAKWLPNKCTHHAAIPIEGTFGY 416
GL YLH + I+H+DIK N+LL +I+ G+A+ L +G+ +
Sbjct: 121 GLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAF 177
Query: 417 LAPEYF--MHGIIDEKTDVFAFGVLLLEIITGRKPVD 451
PE + K D+++ GV L I TG P +
Sbjct: 178 QPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 98/257 (38%), Gaps = 57/257 (22%)
Query: 253 MVGQGGYSEVYKG-NLSDGRKIAVKRLXXXXXXXXXX----XXFLMELGIIGHVC----- 302
++G GG+ VY G +SD +A+K + ME+ ++ V
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 303 ---------HPNTATLVGCCIENGLYLIFNFSQNGNLDAALHDERSKSLEWPIRYKIVLG 353
P++ L+ +E L ++ G AL +E ++S W VL
Sbjct: 75 VIRLLDWFERPDSFVLILERMEPVQDLFDFITERG----ALQEELARSFFWQ-----VLE 125
Query: 354 VARGLHYLHKGCKRRIIHRDIKASNVLLGPDF-EPQITDFGLAKWLPNKCTHHAAIPIEG 412
R H C ++HRDIK N+L+ + E ++ DFG L + +G
Sbjct: 126 AVRHCH----NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDG 175
Query: 413 TFGYLAPEYF-MHGIIDEKTDVFAFGVLLLEIITG-----------------RKPVDSSR 454
T Y PE+ H V++ G+LL +++ G R+ V S
Sbjct: 176 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSEC 235
Query: 455 QNLVLWAKPLMESGNLT 471
Q+L+ W L S T
Sbjct: 236 QHLIRWCLALRPSDRPT 252
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 64/159 (40%), Gaps = 34/159 (21%)
Query: 332 AALHDERSKSLEWPIRYKIVLGVARGLHYLHKGCKRRIIHRDIKASNVLLGPDF-EPQIT 390
AL +E ++S W VL R H C ++HRDIK N+L+ + E ++
Sbjct: 152 GALQEELARSFFWQ-----VLEAVRHCH----NCG--VLHRDIKDENILIDLNRGELKLI 200
Query: 391 DFGLAKWLPNKCTHHAAIPIEGTFGYLAPEYF-MHGIIDEKTDVFAFGVLLLEIITG--- 446
DFG L + +GT Y PE+ H V++ G+LL +++ G
Sbjct: 201 DFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
Query: 447 --------------RKPVDSSRQNLVLWAKPLMESGNLT 471
R+ V S Q+L+ W L S T
Sbjct: 257 FEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPT 295
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,623,284
Number of Sequences: 62578
Number of extensions: 681873
Number of successful extensions: 3468
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 832
Number of HSP's successfully gapped in prelim test: 256
Number of HSP's that attempted gapping in prelim test: 1488
Number of HSP's gapped (non-prelim): 1144
length of query: 558
length of database: 14,973,337
effective HSP length: 104
effective length of query: 454
effective length of database: 8,465,225
effective search space: 3843212150
effective search space used: 3843212150
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)