Query         008656
Match_columns 558
No_of_seqs    389 out of 2416
Neff          7.2 
Searched_HMMs 29240
Date          Mon Mar 25 08:39:52 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008656.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008656hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3omv_A RAF proto-oncogene seri 100.0 6.4E-59 2.2E-63  478.9  29.1  266  282-549    26-301 (307)
  2 4aoj_A High affinity nerve gro 100.0 7.1E-58 2.4E-62  475.9  30.8  267  285-555    34-325 (329)
  3 4asz_A BDNF/NT-3 growth factor 100.0 7.2E-58 2.5E-62  469.7  26.2  265  287-555     8-295 (299)
  4 4gt4_A Tyrosine-protein kinase 100.0 3.5E-57 1.2E-61  466.5  27.5  259  286-546    20-304 (308)
  5 4ase_A Vascular endothelial gr 100.0 1.1E-56 3.6E-61  471.2  25.2  264  285-549    57-348 (353)
  6 4b9d_A Serine/threonine-protei 100.0 1.5E-56 5.2E-61  468.4  24.3  250  291-541    23-276 (350)
  7 4g3f_A NF-kappa-beta-inducing  100.0 1.1E-55 3.7E-60  459.8  24.4  257  287-551    53-319 (336)
  8 4aw0_A HPDK1, 3-phosphoinositi 100.0 6.9E-56 2.3E-60  456.4  20.5  248  290-540    30-283 (311)
  9 3fpq_A Serine/threonine-protei 100.0   5E-55 1.7E-59  446.6  25.8  245  294-541    28-282 (290)
 10 4fih_A Serine/threonine-protei 100.0 5.9E-55   2E-59  455.7  25.0  245  292-541    74-323 (346)
 11 3hyh_A Carbon catabolite-derep 100.0 9.1E-55 3.1E-59  441.3  25.6  246  292-541    13-262 (275)
 12 3ubd_A Ribosomal protein S6 ki 100.0 7.4E-56 2.5E-60  455.4  17.4  251  288-541    20-281 (304)
 13 4fie_A Serine/threonine-protei 100.0 8.7E-54   3E-58  457.6  27.3  246  292-541   151-400 (423)
 14 3hmm_A TGF-beta receptor type- 100.0 2.2E-53 7.5E-58  437.1  21.8  253  292-549     3-298 (303)
 15 4g31_A Eukaryotic translation  100.0 6.6E-52 2.2E-56  425.5  20.9  246  292-541     5-279 (299)
 16 4b99_A Mitogen-activated prote 100.0 8.7E-51   3E-55  432.9  28.3  248  292-541    54-344 (398)
 17 3p86_A Serine/threonine-protei 100.0 6.3E-49 2.2E-53  403.5  28.9  269  283-551    28-301 (309)
 18 3uto_A Twitchin; kinase, muscl 100.0 3.8E-49 1.3E-53  438.9  26.8  248  292-541   157-410 (573)
 19 4f9c_A Cell division cycle 7-r 100.0 2.5E-48 8.5E-53  409.0  24.9  242  292-541    21-352 (361)
 20 4hcu_A Tyrosine-protein kinase 100.0 1.7E-47 5.7E-52  382.7  27.9  261  284-548     2-266 (269)
 21 3cbl_A C-FES, proto-oncogene t 100.0 8.5E-48 2.9E-52  405.8  25.6  264  284-549   106-375 (377)
 22 3v5w_A G-protein coupled recep 100.0   4E-48 1.4E-52  432.5  23.9  248  290-541   187-449 (689)
 23 3kmu_A ILK, integrin-linked ki 100.0 1.7E-47 5.9E-52  380.8  25.0  258  287-548     5-270 (271)
 24 3lb7_A RAF proto-oncogene seri 100.0 5.9E-47   2E-51  388.2  29.0  267  282-550    26-302 (307)
 25 3fe3_A MAP/microtubule affinit 100.0 4.9E-47 1.7E-51  393.5  28.4  248  291-541    14-264 (328)
 26 3gen_A Tyrosine-protein kinase 100.0 5.4E-47 1.9E-51  381.4  27.8  263  283-549    15-281 (283)
 27 2psq_A Fibroblast growth facto 100.0 8.1E-47 2.8E-51  397.8  30.0  264  285-550    74-366 (370)
 28 3kul_A Ephrin type-A receptor  100.0 7.7E-47 2.6E-51  390.4  28.1  263  286-550    43-315 (325)
 29 1k9a_A Carboxyl-terminal SRC k 100.0 7.3E-47 2.5E-51  408.4  28.4  258  285-549   186-446 (450)
 30 3ugc_A Tyrosine-protein kinase 100.0 7.2E-47 2.5E-51  383.2  25.0  262  287-550     5-293 (295)
 31 3og7_A AKAP9-BRAF fusion prote 100.0 6.4E-47 2.2E-51  383.2  24.5  265  282-548    14-288 (289)
 32 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.3E-46 4.5E-51  375.6  26.0  260  286-549     2-265 (268)
 33 3vhe_A Vascular endothelial gr 100.0 9.7E-47 3.3E-51  392.3  25.5  266  284-550    14-357 (359)
 34 1mp8_A Focal adhesion kinase 1 100.0 1.9E-46 6.4E-51  377.8  26.7  265  285-552     8-280 (281)
 35 3dtc_A Mitogen-activated prote 100.0 1.6E-46 5.6E-51  375.1  25.9  256  288-546     3-271 (271)
 36 3t9t_A Tyrosine-protein kinase 100.0 3.6E-46 1.2E-50  371.4  27.9  259  286-548     2-264 (267)
 37 1t46_A HOMO sapiens V-KIT hard 100.0 3.4E-46 1.2E-50  380.1  28.2  267  284-551    15-310 (313)
 38 3s95_A LIMK-1, LIM domain kina 100.0 7.6E-47 2.6E-51  386.1  22.9  263  287-551     5-285 (310)
 39 3tt0_A Basic fibroblast growth 100.0 8.2E-46 2.8E-50  391.1  31.2  266  284-551    61-355 (382)
 40 1rjb_A FL cytokine receptor; k 100.0 1.5E-46   5E-51  389.1  24.5  267  284-551    37-337 (344)
 41 1luf_A Muscle-specific tyrosin 100.0 2.3E-46 7.8E-51  386.7  25.3  263  286-550    41-337 (343)
 42 1qcf_A Haematopoetic cell kina 100.0 1.1E-46 3.8E-51  407.2  23.8  267  284-555   180-451 (454)
 43 1qpc_A LCK kinase; alpha beta  100.0 1.7E-45 5.7E-50  369.8  28.6  267  284-555     5-276 (279)
 44 3soc_A Activin receptor type-2 100.0 2.5E-46 8.6E-51  385.5  23.0  263  282-549    14-319 (322)
 45 2ivs_A Proto-oncogene tyrosine 100.0 1.1E-45 3.8E-50  376.5  26.9  263  285-549    16-312 (314)
 46 2qol_A Ephrin receptor; recept 100.0   5E-46 1.7E-50  392.3  25.2  263  286-550    39-311 (373)
 47 3zgw_A Maternal embryonic leuc 100.0 7.1E-46 2.4E-50  388.1  26.0  250  288-541     6-260 (347)
 48 3fxz_A Serine/threonine-protei 100.0   1E-45 3.5E-50  377.0  26.1  246  292-541    20-269 (297)
 49 2i1m_A Macrophage colony-stimu 100.0 1.9E-45 6.6E-50  379.0  28.4  267  284-551    38-329 (333)
 50 1o6l_A RAC-beta serine/threoni 100.0 6.7E-46 2.3E-50  386.6  25.3  250  289-541     2-260 (337)
 51 2pvf_A Fibroblast growth facto 100.0 3.4E-45 1.2E-49  378.4  29.8  272  284-557    27-328 (334)
 52 1u59_A Tyrosine-protein kinase 100.0 2.4E-45 8.2E-50  370.9  27.8  266  286-554     3-278 (287)
 53 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 5.7E-46 1.9E-50  401.6  24.6  267  284-555   176-447 (452)
 54 4ejn_A RAC-alpha serine/threon 100.0 4.8E-46 1.6E-50  401.0  23.8  303  228-541    90-404 (446)
 55 1xbb_A Tyrosine-protein kinase 100.0 1.9E-45 6.4E-50  372.4  26.8  264  285-551     9-282 (291)
 56 1mqb_A Ephrin type-A receptor  100.0 5.4E-45 1.9E-49  377.6  30.3  264  286-551    38-312 (333)
 57 3cc6_A Protein tyrosine kinase 100.0 3.1E-45   1E-49  368.6  27.6  264  285-551     5-276 (281)
 58 3l9p_A Anaplastic lymphoma kin 100.0 1.4E-45 4.9E-50  387.7  26.0  263  286-550    65-347 (367)
 59 2yab_A Death-associated protei 100.0 2.3E-45 7.9E-50  386.2  27.5  249  292-541    12-272 (361)
 60 2bdw_A Hypothetical protein K1 100.0 2.7E-45 9.2E-50  385.3  27.9  249  292-541    29-284 (362)
 61 2xir_A Vascular endothelial gr 100.0 1.7E-45 5.8E-50  375.5  25.1  265  285-550    20-312 (316)
 62 3qup_A Tyrosine-protein kinase 100.0 1.6E-45 5.5E-50  378.0  25.0  264  286-550    17-300 (323)
 63 4eqm_A Protein kinase; transfe 100.0   3E-45   1E-49  372.8  26.7  258  291-549    10-276 (294)
 64 4e5w_A Tyrosine-protein kinase 100.0 2.5E-45 8.4E-50  372.3  25.7  260  288-548    17-302 (302)
 65 4f0f_A Serine/threonine-protei 100.0   3E-45   1E-49  369.4  25.9  255  288-546    15-287 (287)
 66 3kk8_A Calcium/calmodulin depe 100.0   1E-44 3.5E-49  364.6  29.5  250  291-541     5-261 (284)
 67 1byg_A CSK, protein (C-termina 100.0 2.4E-45 8.1E-50  368.8  24.7  259  284-549    13-274 (278)
 68 1tki_A Titin; serine kinase, m 100.0 2.2E-45 7.7E-50  379.3  25.1  247  292-541     5-257 (321)
 69 1opk_A P150, C-ABL, proto-onco 100.0 1.3E-45 4.4E-50  403.5  24.4  260  284-547   212-477 (495)
 70 3kfa_A Tyrosine-protein kinase 100.0 2.2E-45 7.4E-50  370.2  24.1  262  285-550     6-273 (288)
 71 2y0a_A Death-associated protei 100.0 8.1E-45 2.8E-49  375.4  27.5  249  292-541    11-271 (326)
 72 3niz_A Rhodanese family protei 100.0 8.5E-45 2.9E-49  372.6  27.2  251  290-541    19-300 (311)
 73 3op5_A Serine/threonine-protei 100.0 8.7E-46   3E-50  387.9  20.2  264  288-552    31-333 (364)
 74 3soa_A Calcium/calmodulin-depe 100.0 1.1E-44 3.8E-49  391.2  29.3  249  292-541    11-267 (444)
 75 1p4o_A Insulin-like growth fac 100.0 1.1E-44 3.6E-49  371.4  27.7  262  284-547    17-298 (322)
 76 3pls_A Macrophage-stimulating  100.0 1.2E-44 4.2E-49  366.1  27.8  263  293-557    22-297 (298)
 77 1ob3_A PFPK5, cell division co 100.0 4.4E-45 1.5E-49  369.5  24.5  249  292-541     2-280 (288)
 78 3brb_A Proto-oncogene tyrosine 100.0 5.8E-45   2E-49  372.3  25.5  268  283-551    25-311 (313)
 79 3a62_A Ribosomal protein S6 ki 100.0   1E-44 3.5E-49  374.8  27.7  251  288-541    13-276 (327)
 80 1csn_A Casein kinase-1; phosph 100.0 5.1E-45 1.7E-49  368.9  24.8  260  288-552     6-287 (298)
 81 3poz_A Epidermal growth factor 100.0 3.8E-45 1.3E-49  377.5  24.3  260  288-550    11-280 (327)
 82 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.8E-45 6.1E-50  385.8  21.9  251  288-541    19-280 (353)
 83 2h8h_A Proto-oncogene tyrosine 100.0 1.6E-45 5.5E-50  406.5  22.1  268  284-556   259-531 (535)
 84 3o0g_A Cell division protein k 100.0 1.7E-44 5.9E-49  365.5  27.4  249  292-541     2-282 (292)
 85 3kex_A Receptor tyrosine-prote 100.0 2.8E-45 9.6E-50  377.9  21.9  260  288-550     9-278 (325)
 86 3lxl_A Tyrosine-protein kinase 100.0 1.1E-44 3.7E-49  373.2  25.9  262  288-551    19-306 (327)
 87 3gni_B Strad alpha; kinase fol 100.0   9E-45 3.1E-49  383.3  25.7  257  285-541    18-333 (389)
 88 2zv2_A Calcium/calmodulin-depe 100.0 6.3E-45 2.2E-49  369.8  23.6  250  290-541    11-292 (298)
 89 2ozo_A Tyrosine-protein kinase 100.0 1.7E-44 5.9E-49  404.6  29.3  264  286-552   329-602 (613)
 90 1fot_A TPK1 delta, CAMP-depend 100.0 9.2E-45 3.1E-49  374.8  25.0  247  290-541     4-258 (318)
 91 4dc2_A Protein kinase C IOTA t 100.0 1.5E-44 5.3E-49  384.7  27.4  246  288-536    48-307 (396)
 92 2eva_A TAK1 kinase - TAB1 chim 100.0 2.1E-44 7.3E-49  368.7  27.3  255  288-550     4-265 (307)
 93 3a8x_A Protein kinase C IOTA t 100.0 2.6E-44   9E-49  375.5  28.0  245  289-536     6-264 (345)
 94 4fvq_A Tyrosine-protein kinase 100.0 3.6E-45 1.2E-49  368.7  20.6  254  288-549     4-276 (289)
 95 1u46_A ACK-1, activated CDC42  100.0 9.2E-45 3.2E-49  365.7  23.2  262  287-549    13-285 (291)
 96 3lxp_A Non-receptor tyrosine-p 100.0 1.8E-44 6.2E-49  370.7  25.5  262  288-552    27-314 (318)
 97 3fme_A Dual specificity mitoge 100.0 1.5E-44   5E-49  364.1  24.3  254  287-541     2-266 (290)
 98 3f66_A Hepatocyte growth facto 100.0 1.9E-44 6.7E-49  365.4  25.3  258  292-551    25-294 (298)
 99 3uc3_A Serine/threonine-protei 100.0 2.2E-44 7.4E-49  378.0  26.4  249  289-541    17-274 (361)
100 2i0e_A Protein kinase C-beta I 100.0 1.3E-44 4.5E-49  379.2  24.4  251  288-541    16-276 (353)
101 1xjd_A Protein kinase C, theta 100.0 6.8E-45 2.3E-49  380.3  22.0  250  288-540    13-268 (345)
102 3q4u_A Activin receptor type-1 100.0 1.3E-44 4.3E-49  366.5  23.2  250  290-546     6-300 (301)
103 4fl3_A Tyrosine-protein kinase 100.0 1.8E-44   6E-49  406.1  26.8  264  285-551   361-634 (635)
104 1fvr_A Tyrosine-protein kinase 100.0 1.3E-44 4.6E-49  372.5  23.7  261  288-550    21-302 (327)
105 4fr4_A YANK1, serine/threonine 100.0 1.1E-44 3.7E-49  384.3  23.6  254  286-541     9-271 (384)
106 2r5t_A Serine/threonine-protei 100.0 9.9E-45 3.4E-49  383.1  23.2  247  289-538    35-286 (373)
107 2izr_A Casein kinase I isoform 100.0 1.4E-44 4.8E-49  373.1  23.7  256  290-551     7-284 (330)
108 3lzb_A Epidermal growth factor 100.0 2.1E-44 7.2E-49  372.5  25.0  261  288-551    11-281 (327)
109 3an0_A Dual specificity mitoge 100.0 1.7E-44 5.7E-49  373.5  24.3  256  284-541    43-310 (340)
110 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.6E-44 5.4E-49  378.0  24.3  247  290-541    39-293 (350)
111 4euu_A Serine/threonine-protei 100.0 1.5E-44 5.1E-49  370.9  23.6  257  289-546     6-307 (319)
112 1kob_A Twitchin; kinase, intra 100.0   3E-44   1E-48  381.2  26.6  248  292-541    51-304 (387)
113 2w1i_A JAK2; chromosomal rearr 100.0 3.2E-44 1.1E-48  369.9  26.0  262  288-551    37-325 (326)
114 3dbq_A Dual specificity protei 100.0   4E-44 1.4E-48  372.3  26.6  253  286-541     3-273 (343)
115 3c1x_A Hepatocyte growth facto 100.0 9.3E-45 3.2E-49  382.9  22.0  257  292-550    89-357 (373)
116 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.8E-45 6.1E-50  376.2  15.4  265  284-551    25-305 (319)
117 3c0i_A Peripheral plasma membr 100.0 2.2E-44 7.7E-49  376.1  24.1  249  292-541    24-286 (351)
118 3p1a_A MYT1 kinase, membrane-a 100.0 4.1E-44 1.4E-48  367.2  25.5  246  291-541    56-304 (311)
119 2eue_A Carbon catabolite derep 100.0 2.8E-44 9.7E-49  360.4  23.8  246  292-541    13-262 (275)
120 2x4f_A Myosin light chain kina 100.0 4.8E-44 1.6E-48  377.4  26.0  249  295-545    92-348 (373)
121 3tki_A Serine/threonine-protei 100.0 1.6E-44 5.4E-49  373.0  21.7  248  292-541     7-261 (323)
122 4aw2_A Serine/threonine-protei 100.0   6E-45   2E-49  392.6  19.3  254  288-541    70-338 (437)
123 2a2a_A Death-associated protei 100.0   7E-44 2.4E-48  366.5  26.1  249  292-541    12-272 (321)
124 2qkw_B Protein kinase; three-h 100.0 4.2E-45 1.4E-49  375.3  17.0  258  289-548    36-315 (321)
125 3h4j_B AMPK kdaid, SNF1-like p 100.0 3.7E-45 1.3E-49  380.9  16.5  246  292-541     9-258 (336)
126 2wqm_A Serine/threonine-protei 100.0   2E-43 6.9E-48  360.3  28.9  262  291-552    31-301 (310)
127 1u5q_A Serine/threonine protei 100.0 7.2E-44 2.5E-48  372.4  26.0  246  292-541    54-305 (348)
128 3ork_A Serine/threonine protei 100.0 2.1E-44 7.1E-49  368.8  21.4  256  291-547    11-280 (311)
129 2w4o_A Calcium/calmodulin-depe 100.0 5.1E-44 1.7E-48  373.4  24.7  246  291-541    52-305 (349)
130 4agu_A Cyclin-dependent kinase 100.0 8.3E-44 2.8E-48  363.0  25.6  249  292-541     3-284 (311)
131 3f3z_A Calcium/calmodulin-depe 100.0 1.3E-43 4.6E-48  355.5  26.6  246  292-541     9-261 (277)
132 3bhy_A Death-associated protei 100.0 1.5E-43   5E-48  355.9  26.8  255  292-547     5-273 (283)
133 2c30_A Serine/threonine-protei 100.0 1.3E-43 4.3E-48  365.7  26.8  244  293-541    46-294 (321)
134 2zmd_A Dual specificity protei 100.0 1.4E-43 4.6E-48  375.9  27.7  253  286-541    50-320 (390)
135 3v8s_A RHO-associated protein  100.0 9.2E-45 3.1E-49  388.1  18.7  252  288-541    65-329 (410)
136 2yfx_A Tyrosine-protein kinase 100.0 8.7E-44   3E-48  366.4  25.2  263  286-550    24-306 (327)
137 3oz6_A Mitogen-activated prote 100.0 9.1E-44 3.1E-48  375.7  26.0  247  292-541     9-328 (388)
138 2w5a_A Serine/threonine-protei 100.0 4.9E-44 1.7E-48  358.7  22.6  252  291-543     5-269 (279)
139 2vd5_A DMPK protein; serine/th 100.0 1.5E-44   5E-49  386.7  19.8  253  288-541    57-327 (412)
140 3is5_A Calcium-dependent prote 100.0 1.8E-43 6.3E-48  357.4  26.4  248  292-541    22-278 (285)
141 2pmi_A Negative RE, cyclin-dep 100.0 7.8E-44 2.7E-48  366.1  24.0  249  291-541     4-293 (317)
142 3g33_A Cell division protein k 100.0   6E-44 2.1E-48  364.2  22.9  252  289-541     6-296 (308)
143 3lij_A Calcium/calmodulin depe 100.0 1.4E-43 4.9E-48  386.7  27.1  253  292-546    37-298 (494)
144 3g2f_A Bone morphogenetic prot 100.0 6.6E-44 2.3E-48  367.6  22.9  257  287-550     8-320 (336)
145 3uzp_A CKI-delta, CKID, casein 100.0 1.8E-43 6.1E-48  357.2  25.5  255  292-551     9-283 (296)
146 3mwu_A Calmodulin-domain prote 100.0 8.3E-44 2.8E-48  387.6  24.7  248  292-541    22-276 (486)
147 3qd2_B Eukaryotic translation  100.0 6.9E-44 2.3E-48  365.2  22.3  246  292-541     6-325 (332)
148 2y94_A 5'-AMP-activated protei 100.0 6.9E-44 2.4E-48  388.2  23.5  249  290-541    14-266 (476)
149 3fdn_A Serine/threonine-protei 100.0 1.2E-43   4E-48  356.7  23.3  249  290-542     7-258 (279)
150 3q5i_A Protein kinase; CDPK, m 100.0 2.5E-43 8.5E-48  385.7  27.8  248  292-541    36-301 (504)
151 1x8b_A WEE1HU, WEE1-like prote 100.0 3.7E-43 1.3E-47  351.9  26.8  243  292-541    11-279 (289)
152 2owb_A Serine/threonine-protei 100.0 2.4E-43 8.3E-48  365.2  26.1  248  291-541    40-291 (335)
153 4hgt_A Casein kinase I isoform 100.0 2.2E-43 7.6E-48  356.1  25.2  256  292-552     9-284 (296)
154 3rp9_A Mitogen-activated prote 100.0 2.8E-43 9.5E-48  380.2  27.6  253  286-541    48-396 (458)
155 3hko_A Calcium/calmodulin-depe 100.0   1E-43 3.6E-48  367.5  23.0  251  291-541    25-330 (345)
156 1cm8_A Phosphorylated MAP kina 100.0 3.6E-43 1.2E-47  369.5  27.5  251  285-541    19-307 (367)
157 1t4h_A Serine/threonine-protei 100.0 3.3E-43 1.1E-47  355.4  25.9  251  288-541    22-282 (290)
158 2v62_A Serine/threonine-protei 100.0 1.6E-44 5.4E-49  375.6  16.5  258  287-546    32-326 (345)
159 3nyv_A Calmodulin-domain prote 100.0   1E-43 3.5E-48  386.3  23.4  249  291-541    25-281 (484)
160 3gbz_A Kinase, CMGC CDK; ssgci 100.0   1E-43 3.6E-48  367.1  22.4  249  291-541    33-318 (329)
161 3ll6_A Cyclin G-associated kin 100.0 2.4E-43 8.2E-48  361.9  24.7  260  284-550    20-310 (337)
162 2rku_A Serine/threonine-protei 100.0 5.1E-43 1.8E-47  354.6  26.7  248  291-541    14-265 (294)
163 2h6d_A 5'-AMP-activated protei 100.0   2E-43 6.8E-48  353.7  23.1  250  289-541     8-261 (276)
164 3ttj_A Mitogen-activated prote 100.0 1.6E-43 5.4E-48  384.2  24.0  247  291-541    61-355 (464)
165 2y7j_A Phosphorylase B kinase  100.0 7.1E-43 2.4E-47  366.9  28.1  249  292-541    94-359 (365)
166 3llt_A Serine/threonine kinase 100.0 4.5E-43 1.5E-47  365.6  26.4  248  288-541    31-355 (360)
167 2nru_A Interleukin-1 receptor- 100.0 1.9E-43 6.6E-48  359.6  23.1  254  294-548    33-306 (307)
168 3mdy_A Bone morphogenetic prot 100.0 3.8E-43 1.3E-47  361.3  25.3  252  292-550    37-333 (337)
169 1b6c_B TGF-B superfamily recep 100.0 3.8E-43 1.3E-47  362.4  25.0  253  291-550    41-338 (342)
170 2jii_A Serine/threonine-protei 100.0 7.8E-44 2.7E-48  371.1  19.9  256  288-551    38-339 (352)
171 3cok_A Serine/threonine-protei 100.0   6E-44 2.1E-48  358.2  18.2  248  292-541    11-262 (278)
172 1phk_A Phosphorylase kinase; g 100.0 1.3E-42 4.4E-47  351.6  28.0  250  291-541    16-283 (298)
173 2h34_A Serine/threonine-protei 100.0 2.9E-43   1E-47  360.3  23.4  258  291-550    33-298 (309)
174 2vgo_A Serine/threonine-protei 100.0 3.7E-43 1.3E-47  353.9  23.8  250  288-541    10-262 (284)
175 3dls_A PAS domain-containing s 100.0   1E-43 3.6E-48  368.9  20.2  242  292-542    24-275 (335)
176 2j0j_A Focal adhesion kinase 1 100.0 7.3E-43 2.5E-47  394.3  28.8  264  285-551   383-654 (656)
177 1nxk_A MAP kinase-activated pr 100.0 4.3E-43 1.5E-47  373.4  25.3  243  292-541    61-321 (400)
178 3eqc_A Dual specificity mitoge 100.0 4.3E-43 1.5E-47  366.0  24.8  251  288-541    29-324 (360)
179 3a7i_A MST3 kinase, serine/thr 100.0 8.4E-43 2.9E-47  354.6  26.3  247  292-542    22-271 (303)
180 2buj_A Serine/threonine-protei 100.0 1.2E-43 4.2E-48  362.7  20.1  263  284-548    21-306 (317)
181 2a19_B Interferon-induced, dou 100.0 2.7E-43 9.4E-48  353.3  22.2  247  292-550    11-276 (284)
182 2x7f_A TRAF2 and NCK-interacti 100.0   1E-42 3.5E-47  357.3  26.9  250  289-541    21-286 (326)
183 3uim_A Brassinosteroid insensi 100.0 1.5E-44   5E-49  371.3  13.2  260  285-545    23-308 (326)
184 1ua2_A CAK, cell division prot 100.0 6.3E-43 2.2E-47  363.7  25.5  250  291-541     9-291 (346)
185 2jam_A Calcium/calmodulin-depe 100.0 9.4E-43 3.2E-47  354.7  26.2  246  292-541     9-261 (304)
186 3mtl_A Cell division protein k 100.0 1.5E-43   5E-48  365.2  20.4  248  292-541     2-281 (324)
187 3lm5_A Serine/threonine-protei 100.0 3.3E-43 1.1E-47  363.0  23.1  250  292-541    28-287 (327)
188 4eut_A Serine/threonine-protei 100.0 4.1E-44 1.4E-48  380.1  16.3  260  289-549     6-310 (396)
189 2j7t_A Serine/threonine-protei 100.0 5.3E-43 1.8E-47  355.1  23.6  248  292-541    19-275 (302)
190 4aaa_A Cyclin-dependent kinase 100.0 1.7E-43 5.9E-48  365.1  20.2  255  286-541    19-306 (331)
191 2wei_A Calmodulin-domain prote 100.0 7.8E-43 2.7E-47  352.5  24.4  248  292-541    22-276 (287)
192 3nsz_A CK II alpha, casein kin 100.0 1.8E-42 6.1E-47  356.0  27.2  243  290-541    34-319 (330)
193 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.2E-42 4.1E-47  363.9  26.4  255  284-550    57-341 (365)
194 2xrw_A Mitogen-activated prote 100.0 1.7E-42 5.8E-47  364.4  27.5  247  291-541    24-318 (371)
195 3byv_A Rhoptry kinase; malaria 100.0 4.2E-44 1.4E-48  377.1  15.2  251  289-550    70-370 (377)
196 3n9x_A Phosphotransferase; mal 100.0 3.3E-42 1.1E-46  369.9  29.9  253  286-541    21-361 (432)
197 3mi9_A Cell division protein k 100.0 6.7E-43 2.3E-47  363.3  23.7  250  291-541    16-311 (351)
198 3com_A Serine/threonine-protei 100.0 1.7E-42   6E-47  353.6  26.2  250  288-541    25-278 (314)
199 3eb0_A Putative uncharacterize 100.0 1.2E-42 3.9E-47  366.9  25.6  253  288-547     3-329 (383)
200 2qr7_A Ribosomal protein S6 ki 100.0 5.9E-43   2E-47  364.8  22.8  243  292-541    22-277 (342)
201 2dyl_A Dual specificity mitoge 100.0 1.2E-42 4.2E-47  354.7  24.3  258  283-541    16-283 (318)
202 2r3i_A Cell division protein k 100.0 1.5E-42   5E-47  351.4  24.7  250  291-541     2-283 (299)
203 3pfq_A PKC-B, PKC-beta, protei 100.0 6.7E-43 2.3E-47  395.7  24.4  253  286-541   335-597 (674)
204 2acx_A G protein-coupled recep 100.0 3.6E-43 1.2E-47  389.7  21.6  251  289-541   181-444 (576)
205 2yex_A Serine/threonine-protei 100.0 9.2E-43 3.1E-47  348.5  22.3  248  292-541     7-261 (276)
206 2vwi_A Serine/threonine-protei 100.0   2E-43   7E-48  357.5  17.7  255  286-541     9-287 (303)
207 1vzo_A Ribosomal protein S6 ki 100.0 1.2E-43 4.2E-48  371.1  16.6  252  288-542    50-322 (355)
208 3aln_A Dual specificity mitoge 100.0 5.1E-43 1.7E-47  360.4  20.7  257  283-541    13-285 (327)
209 2clq_A Mitogen-activated prote 100.0 1.8E-42   6E-47  349.7  24.1  254  286-541    16-278 (295)
210 1blx_A Cyclin-dependent kinase 100.0 1.6E-42 5.3E-47  355.5  24.0  250  291-541    10-296 (326)
211 3cek_A Dual specificity protei 100.0 4.3E-42 1.5E-46  351.3  27.1  254  285-541    21-292 (313)
212 3kn6_A Ribosomal protein S6 ki 100.0 7.8E-43 2.7E-47  360.7  21.5  237  298-540    17-269 (325)
213 2ycf_A Serine/threonine-protei 100.0 8.2E-43 2.8E-47  358.4  21.5  248  292-541    10-274 (322)
214 2ac3_A MAP kinase-interacting  100.0   1E-42 3.6E-47  355.6  22.1  246  292-541    12-295 (316)
215 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.3E-42 4.4E-47  383.5  24.4  250  289-540   182-447 (543)
216 3gxj_A TGF-beta receptor type- 100.0 3.2E-45 1.1E-49  370.8   2.9  251  292-549     3-298 (303)
217 3q60_A ROP5B; pseudokinase, tr 100.0 3.8E-43 1.3E-47  368.8  18.8  257  291-550    61-363 (371)
218 2fst_X Mitogen-activated prote 100.0 9.2E-43 3.1E-47  366.8  21.7  251  285-541    23-311 (367)
219 3i6u_A CDS1, serine/threonine- 100.0 5.6E-43 1.9E-47  374.6  20.3  249  291-541   134-399 (419)
220 4exu_A Mitogen-activated prote 100.0 4.4E-42 1.5E-46  361.2  26.3  251  284-541    35-323 (371)
221 1j1b_A Glycogen synthase kinas 100.0 1.6E-42 5.6E-47  371.1  23.2  243  292-541    54-336 (420)
222 3pg1_A Mitogen-activated prote 100.0 1.5E-42 5.2E-47  361.8  21.4  251  290-541    20-316 (362)
223 3sv0_A Casein kinase I-like; t 100.0 4.8E-42 1.6E-46  374.4  25.6  256  291-551     6-281 (483)
224 3kvw_A DYRK2, dual specificity 100.0 1.2E-41 4.2E-46  365.4  28.0  245  291-541    96-408 (429)
225 2wtk_C Serine/threonine-protei 100.0 7.6E-42 2.6E-46  347.1  24.7  247  292-541     5-263 (305)
226 3qyz_A Mitogen-activated prote 100.0 8.3E-42 2.8E-46  357.7  25.6  246  292-541    27-313 (364)
227 2b9h_A MAP kinase FUS3, mitoge 100.0 1.7E-41 5.9E-46  352.0  26.9  247  291-541    10-305 (353)
228 2pml_X PFPK7, Ser/Thr protein  100.0 8.4E-43 2.9E-47  361.1  16.5  250  289-541    28-322 (348)
229 3coi_A Mitogen-activated prote 100.0 1.7E-41 5.9E-46  353.2  26.2  250  285-541    18-305 (353)
230 4e7w_A Glycogen synthase kinas 100.0 6.6E-42 2.3E-46  363.3  23.3  244  291-541    39-321 (394)
231 1z57_A Dual specificity protei 100.0 1.8E-41   6E-46  347.9  25.5  246  290-541    12-328 (339)
232 1zy4_A Serine/threonine-protei 100.0 9.2E-42 3.1E-46  344.5  21.7  244  292-541     6-283 (303)
233 2i6l_A Mitogen-activated prote 100.0 1.9E-41 6.6E-46  345.2  24.1  246  291-541    10-305 (320)
234 1wak_A Serine/threonine-protei 100.0 9.1E-42 3.1E-46  358.5  22.3  245  291-541    36-391 (397)
235 3e3p_A Protein kinase, putativ 100.0 1.7E-41 5.7E-46  353.0  22.6  249  289-541    20-314 (360)
236 2iwi_A Serine/threonine-protei 100.0 3.4E-41 1.2E-45  344.2  20.7  244  288-541    27-283 (312)
237 3rgf_A Cyclin-dependent kinase 100.0 3.9E-41 1.3E-45  357.8  21.9  244  293-541    21-333 (405)
238 2eu9_A Dual specificity protei 100.0 1.7E-40   6E-45  343.1  25.0  245  291-541    18-333 (355)
239 3fhr_A MAP kinase-activated pr 100.0 6.5E-41 2.2E-45  347.6  21.8  243  292-541    28-287 (336)
240 3a99_A Proto-oncogene serine/t 100.0 2.1E-41 7.3E-46  348.4  17.3  244  288-541    39-293 (320)
241 2vx3_A Dual specificity tyrosi 100.0 1.8E-40 6.2E-45  350.0  24.4  245  291-541    53-372 (382)
242 1q8y_A SR protein kinase; tran 100.0 8.3E-41 2.8E-45  349.0  20.4  248  288-541    15-333 (373)
243 3p23_A Serine/threonine-protei 100.0 1.4E-40 4.7E-45  357.9  20.2  252  284-541    16-283 (432)
244 2rio_A Serine/threonine-protei 100.0 2.3E-39 7.9E-44  348.1  22.5  242  292-541    15-295 (434)
245 3uqc_A Probable conserved tran 100.0 2.3E-39 7.9E-44  329.1  20.3  232  289-550    28-267 (286)
246 3dzo_A Rhoptry kinase domain;  100.0 1.6E-39 5.4E-44  347.3  18.5  249  290-548    76-372 (413)
247 3qa8_A MGC80376 protein; kinas 100.0   3E-39   1E-43  362.7  17.9  255  292-547    14-308 (676)
248 3m2w_A MAP kinase-activated pr 100.0 2.6E-38 8.8E-43  321.8  22.0  222  292-541    17-256 (299)
249 2pzi_A Probable serine/threoni 100.0 1.8E-38 6.2E-43  359.7  22.7  244  290-551    78-331 (681)
250 2vuw_A Serine/threonine-protei 100.0 1.1E-39 3.9E-44  337.2   8.0  240  289-540    17-329 (336)
251 4azs_A Methyltransferase WBDD; 100.0 7.1E-32 2.4E-36  299.8   7.5  183  299-486   241-435 (569)
252 3en9_A Glycoprotease, O-sialog  99.9 1.4E-28   5E-33  271.5   8.2  184  296-490   340-539 (540)
253 1zar_A RIO2 kinase; serine kin  99.9 2.3E-24   8E-29  218.7  11.6  146  292-462    90-252 (282)
254 1zth_A RIO1 serine protein kin  99.8 1.6E-20 5.6E-25  187.6  12.9  138  293-440    48-219 (258)
255 4gyi_A RIO2 kinase; protein ki  99.7 2.7E-18 9.4E-23  181.0   5.4  135  294-439    97-264 (397)
256 3tm0_A Aminoglycoside 3'-phosp  99.4 1.2E-12 4.2E-17  129.5  10.2  139  293-439    15-213 (263)
257 1nd4_A Aminoglycoside 3'-phosp  99.2 2.8E-11 9.6E-16  118.5   9.0  132  294-439    22-214 (264)
258 3dxp_A Putative acyl-COA dehyd  99.2 7.1E-11 2.4E-15  122.7  11.4  141  297-441    43-250 (359)
259 3sg8_A APH(2'')-ID; antibiotic  99.1 1.5E-10   5E-15  117.5  10.3  182  298-489    26-287 (304)
260 3r70_A Aminoglycoside phosphot  98.8 3.1E-08 1.1E-12  101.3  14.9  133  296-442    41-240 (320)
261 3tdw_A Gentamicin resistance p  98.6 4.3E-07 1.5E-11   92.4  15.8  135  298-442    25-227 (306)
262 3ovc_A Hygromycin-B 4-O-kinase  98.5 4.5E-07 1.5E-11   94.6  12.8   74  297-377    46-122 (362)
263 4gkh_A Aminoglycoside 3'-phosp  98.5 1.1E-06 3.6E-11   86.9  14.1  132  299-440    31-224 (272)
264 3ats_A Putative uncharacterize  98.4 5.3E-07 1.8E-11   93.0   7.7   80  296-377    24-121 (357)
265 2q83_A YTAA protein; 2635576,   98.3 6.4E-06 2.2E-10   83.6  13.0  136  298-439    38-252 (346)
266 3d1u_A Putative fructosamine-3  98.2 1.3E-05 4.3E-10   81.0  14.0   75  296-376    19-97  (288)
267 2olc_A MTR kinase, methylthior  98.2 7.1E-06 2.4E-10   86.0  11.5   76  297-374    35-120 (397)
268 2pyw_A Uncharacterized protein  98.0 9.9E-06 3.4E-10   85.8   8.3   78  407-485   230-312 (420)
269 2yle_A Protein spire homolog 1  97.8  0.0002 6.8E-09   69.1  13.1  138  374-543    33-196 (229)
270 3jr1_A Putative fructosamine-3  97.7 9.6E-05 3.3E-09   75.5  10.4   75  297-376    41-118 (312)
271 3csv_A Aminoglycoside phosphot  97.6  0.0002 6.7E-09   73.0  10.2  137  299-442    25-220 (333)
272 3dxq_A Choline/ethanolamine ki  97.5  0.0008 2.7E-08   67.5  13.4  135  297-441    23-204 (301)
273 2ppq_A HSK, HK, homoserine kin  97.5 0.00029   1E-08   71.1   9.2  140  296-439    26-217 (322)
274 1nw1_A Choline kinase (49.2 KD  97.3 0.00086 2.9E-08   71.3  10.4   72  297-376    78-159 (429)
275 3f7w_A Putative fructosamine-3  97.2  0.0023 7.9E-08   63.6  12.7   79  292-376    15-97  (288)
276 3c5i_A Choline kinase; choline  97.0  0.0013 4.5E-08   67.9   8.8   72  298-376    39-121 (369)
277 3feg_A Choline/ethanolamine ki  96.8  0.0038 1.3E-07   65.3   9.8  136  298-440    56-255 (379)
278 2qg7_A Ethanolamine kinase PV0  96.7  0.0079 2.7E-07   64.5  11.7   73  297-376   113-188 (458)
279 1zyl_A Hypothetical protein YI  96.7  0.0084 2.9E-07   60.4  11.2  137  299-441    33-225 (328)
280 3i1a_A Spectinomycin phosphotr  96.6   0.006   2E-07   62.5   9.6   68  301-376    32-108 (339)
281 1u8s_A Glycine cleavage system  96.4  0.0034 1.2E-07   59.0   5.6   64  180-245     7-70  (192)
282 3f2s_A CK, chetk-alpha, cholin  96.2   0.019 6.4E-07   60.5  10.8  138  298-439    58-280 (401)
283 3mes_A Choline kinase; malaria  95.7   0.023 7.7E-07   60.3   8.7   72  298-376    76-157 (424)
284 2nyi_A Unknown protein; protei  95.5  0.0093 3.2E-07   56.3   4.4   47  180-227     6-52  (195)
285 1zpv_A ACT domain protein; str  95.4   0.024 8.3E-07   46.1   5.9   67  180-247     6-72  (91)
286 3g15_A CK, chetk-alpha, cholin  94.0    0.31   1E-05   50.8  11.7   30  411-440   246-281 (401)
287 2ko1_A CTR148A, GTP pyrophosph  93.7   0.062 2.1E-06   43.0   4.4   62  179-241     5-66  (88)
288 2f1f_A Acetolactate synthase i  91.7    0.28 9.6E-06   44.9   6.3   63  180-243     4-67  (164)
289 2nyi_A Unknown protein; protei  91.0    0.23 7.8E-06   46.6   5.2   68  179-248    93-166 (195)
290 2pc6_A Probable acetolactate s  89.6    0.52 1.8E-05   43.2   6.0   63  180-243     5-68  (165)
291 3cxl_A N-chimerin; SH2, RHO-GA  88.8   0.031   1E-06   59.9  -3.2   59  296-357   146-212 (463)
292 1u8s_A Glycine cleavage system  88.6    0.62 2.1E-05   43.3   6.0   69  179-247    93-168 (192)
293 3obi_A Formyltetrahydrofolate   84.7    0.88   3E-05   45.4   5.0   65  180-245     7-74  (288)
294 3nrb_A Formyltetrahydrofolate   84.0    0.79 2.7E-05   45.8   4.3   63  180-243     8-71  (287)
295 3n0v_A Formyltetrahydrofolate   82.1     1.6 5.6E-05   43.5   5.7   65  180-244     9-74  (286)
296 3o1l_A Formyltetrahydrofolate   81.9     1.9 6.6E-05   43.3   6.2   66  180-246    23-91  (302)
297 3p96_A Phosphoserine phosphata  80.2     1.1 3.7E-05   46.8   3.8   65  181-246    14-79  (415)
298 3lou_A Formyltetrahydrofolate   80.1     1.9 6.4E-05   43.1   5.4   67  180-246    11-81  (292)
299 2fgc_A Acetolactate synthase,   77.2       2 6.9E-05   40.2   4.2   62  180-242    30-92  (193)
300 4ann_A ESSB; membrane protein,  76.1     4.5 0.00015   38.5   6.4  115  347-490    43-158 (215)
301 1cja_A Protein (actin-fragmin   71.3      23 0.00078   36.0  10.6  144  287-440    61-238 (342)
302 4ano_A ESSB; membrane protein,  68.9      13 0.00045   35.3   7.9  115  347-490    48-163 (219)
303 1y7p_A Hypothetical protein AF  65.4     4.7 0.00016   38.4   3.8   59  181-242     6-68  (223)
304 2jhe_A Transcription regulator  60.9      15 0.00051   32.6   6.4   59  181-243     2-60  (190)
305 3ls8_A Phosphatidylinositol 3-  58.9      99  0.0034   33.9  13.4   25  414-438   477-501 (614)
306 2x6h_A GH13170P, VPS34, phosph  55.1      48  0.0016   37.0  10.3   25  414-438   551-575 (696)
307 2y3a_A Phosphatidylinositol-4,  51.4 3.1E+02   0.011   32.2  16.6   25  414-438   940-964 (1092)
308 2f06_A Conserved hypothetical   45.6      25 0.00087   30.4   5.1   39  179-217     6-44  (144)
309 2wxf_A Phosphatidylinositol-4,  36.7 3.1E+02   0.011   31.6  13.5   25  414-438   788-812 (940)
310 3oja_A Leucine-rich immune mol  31.8     4.2 0.00014   43.2  -2.9   30  333-362   323-352 (487)
311 3hhm_A Phosphatidylinositol-4,  31.1      71  0.0024   37.4   7.0   61  374-438   898-961 (1091)
312 1sc6_A PGDH, D-3-phosphoglycer  26.2      61  0.0021   33.5   4.9   50  179-229   331-380 (404)
313 2f06_A Conserved hypothetical   22.9   1E+02  0.0035   26.3   5.1   29  185-213    78-106 (144)
314 3p96_A Phosphoserine phosphata  21.7 1.3E+02  0.0044   30.7   6.3   67  179-247   101-168 (415)
315 1ygy_A PGDH, D-3-phosphoglycer  21.3 1.4E+02  0.0046   32.0   6.6   59  176-234   451-510 (529)
316 1e7u_A Phosphatidylinositol 3-  20.4      99  0.0034   35.8   5.5   25  414-438   804-828 (961)

No 1  
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00  E-value=6.4e-59  Score=478.88  Aligned_cols=266  Identities=36%  Similarity=0.685  Sum_probs=230.8

Q ss_pred             CCCCceeeCCCceeeeeeeeecCceEEEEEEECCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCC
Q 008656          282 DGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKP  361 (558)
Q Consensus       282 ~~~~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~  361 (558)
                      +....|+|+.+++++.++||+|+||+||+|++.+ .||||+++....+....+.|.+|+.+|++++|||||+++|++.+ 
T Consensus        26 ~~~~~Wei~~~~l~l~~~iG~G~fG~Vy~~~~~~-~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-  103 (307)
T 3omv_A           26 DSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-  103 (307)
T ss_dssp             ---CCCBCCTTSCCEEEECCCCSSSEEEEEESSS-EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-
T ss_pred             CCCcCcEEcHHHeEEeeEEeeCCCcEEEEEEECC-cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-
Confidence            3456899999999999999999999999999765 69999998776677777899999999999999999999998865 


Q ss_pred             CCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecc
Q 008656          362 PSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKA  441 (558)
Q Consensus       362 ~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~  441 (558)
                      +.+|||||||+||+|.++|+...+.+++..++.|+.||+.||+|||+++||||||||+|||+++++.+||+|||+|+...
T Consensus       104 ~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~  183 (307)
T 3omv_A          104 DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS  183 (307)
T ss_dssp             SSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC--
T ss_pred             CeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecc
Confidence            56899999999999999998877889999999999999999999999999999999999999999999999999998654


Q ss_pred             cC---CccccCCCCCCccchhhhcC---CCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCC----CCC
Q 008656          442 QS---GVMTAETGTYRWMAPEVIEH---KPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRP----TIP  511 (558)
Q Consensus       442 ~~---~~~~~~~gt~~y~APEv~~~---~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~----~ip  511 (558)
                      ..   .......||+.|||||++.+   .+|+.++|||||||+||||+||+.||.+.++.......+..+...    .++
T Consensus       184 ~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~  263 (307)
T 3omv_A          184 RWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLY  263 (307)
T ss_dssp             ----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSC
T ss_pred             cCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCccccc
Confidence            32   23456689999999999964   469999999999999999999999999888776666666555432    456


Q ss_pred             CCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHH
Q 008656          512 KNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKE  549 (558)
Q Consensus       512 ~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~  549 (558)
                      ..+++++.+||.+||+.||++|||+.|+++.|+.+...
T Consensus       264 ~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~  301 (307)
T 3omv_A          264 KNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS  301 (307)
T ss_dssp             TTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred             ccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence            78999999999999999999999999999999877543


No 2  
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00  E-value=7.1e-58  Score=475.85  Aligned_cols=267  Identities=30%  Similarity=0.574  Sum_probs=229.1

Q ss_pred             CceeeCCCceeeeeeeeecCceEEEEEEEC-------CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEee
Q 008656          285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYC-------SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA  357 (558)
Q Consensus       285 ~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~-------~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~  357 (558)
                      ..+.|+.++|.+.++||+|+||.||+|++.       ++.||||+++..  +....+.|.+|+.+|++++|||||+++|+
T Consensus        34 ~~~~i~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~  111 (329)
T 4aoj_A           34 CVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTMLQHQHIVRFFGV  111 (329)
T ss_dssp             CSCBCCGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC--SHHHHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred             hhcccCHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEE
Confidence            356788889999999999999999999874       567999999854  45566889999999999999999999999


Q ss_pred             ecCCCCceeEEEecCCCCHHHHHHhhc--------------cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEe
Q 008656          358 CTKPPSLCIVTEFMSGGSVYDYLHKLK--------------GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM  423 (558)
Q Consensus       358 ~~~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl  423 (558)
                      |.+++.+|||||||+||+|.+++++..              +++++..++.|+.||+.||+|||+++||||||||+|||+
T Consensus       112 ~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl  191 (329)
T 4aoj_A          112 CTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV  191 (329)
T ss_dssp             ECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE
T ss_pred             EEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEE
Confidence            999999999999999999999997532              468999999999999999999999999999999999999


Q ss_pred             CCCCcEEEEecCcceecccCC---ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHH
Q 008656          424 DENEVVKVADFGVARVKAQSG---VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAV  499 (558)
Q Consensus       424 ~~~~~vkL~DFG~a~~~~~~~---~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~  499 (558)
                      +.++.+||+|||+++......   ..+...||+.|||||++.+..|+.++|||||||+||||+| |+.||...++.+...
T Consensus       192 ~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~  271 (329)
T 4aoj_A          192 GQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAID  271 (329)
T ss_dssp             ETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHH
T ss_pred             CCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence            999999999999998654332   2334579999999999999999999999999999999999 999999998877665


Q ss_pred             HHHhcCCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHhhcc
Q 008656          500 GVVQKGLRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKEVYSLYV  555 (558)
Q Consensus       500 ~v~~~~~r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~~~~~~  555 (558)
                      . +..+.++..|..+++++.+||.+||+.||++|||+.||++.|+.+.+ ..+.|+
T Consensus       272 ~-i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~-~pp~~l  325 (329)
T 4aoj_A          272 C-ITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ-APPVYL  325 (329)
T ss_dssp             H-HHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH-SCC---
T ss_pred             H-HHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh-CCcccc
Confidence            5 44567888999999999999999999999999999999999999875 344443


No 3  
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00  E-value=7.2e-58  Score=469.73  Aligned_cols=265  Identities=29%  Similarity=0.573  Sum_probs=232.6

Q ss_pred             eeeCCCceeeeeeeeecCceEEEEEEEC-------CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeec
Q 008656          287 WEIDPKHLKFGSKVASGSYGDLYRGTYC-------SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACT  359 (558)
Q Consensus       287 ~~i~~~~~~i~~~LG~GsfG~Vy~g~~~-------~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~  359 (558)
                      +.|+.++|.+.++||+|+||.||+|++.       ++.||||+++..  +....++|.+|+.+|++++|||||+++|+|.
T Consensus         8 ~~I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~   85 (299)
T 4asz_A            8 QHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCV   85 (299)
T ss_dssp             CBCCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred             cccCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC--ChHHHHHHHHHHHHHHhCCCCCCccEEEEEe
Confidence            4678889999999999999999999874       567999999854  4556788999999999999999999999999


Q ss_pred             CCCCceeEEEecCCCCHHHHHHhhc------------cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCC
Q 008656          360 KPPSLCIVTEFMSGGSVYDYLHKLK------------GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENE  427 (558)
Q Consensus       360 ~~~~~~lV~E~~~ggsL~~~l~~~~------------~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~  427 (558)
                      +++.+|||||||+||+|.++|++..            ..+++..++.|+.||+.||+|||+++||||||||+|||++.++
T Consensus        86 ~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~  165 (299)
T 4asz_A           86 EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENL  165 (299)
T ss_dssp             SSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG
T ss_pred             eCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCC
Confidence            9999999999999999999997632            3689999999999999999999999999999999999999999


Q ss_pred             cEEEEecCcceecccCCcc---ccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHh
Q 008656          428 VVKVADFGVARVKAQSGVM---TAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQ  503 (558)
Q Consensus       428 ~vkL~DFG~a~~~~~~~~~---~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~~v~~  503 (558)
                      .+||+|||+|+........   ....||+.|||||++.+..|+.++|||||||+||||+| |+.||.+.++.+....+ .
T Consensus       166 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i-~  244 (299)
T 4asz_A          166 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECI-T  244 (299)
T ss_dssp             CEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH-H
T ss_pred             cEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH-H
Confidence            9999999999865443222   23358999999999999999999999999999999999 99999999988776654 4


Q ss_pred             cCCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHhhcc
Q 008656          504 KGLRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKEVYSLYV  555 (558)
Q Consensus       504 ~~~r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~~~~~~  555 (558)
                      .+.++..|..+++++.+||.+||+.||.+|||+.++.+.|+++.+. .+.|+
T Consensus       245 ~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~-~p~~l  295 (299)
T 4asz_A          245 QGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA-SPVYL  295 (299)
T ss_dssp             HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH-SCCCS
T ss_pred             cCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc-CCccc
Confidence            5667888999999999999999999999999999999999998753 33443


No 4  
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00  E-value=3.5e-57  Score=466.52  Aligned_cols=259  Identities=27%  Similarity=0.543  Sum_probs=229.3

Q ss_pred             ceeeCCCceeeeeeeeecCceEEEEEEEC-------CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeee
Q 008656          286 VWEIDPKHLKFGSKVASGSYGDLYRGTYC-------SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGAC  358 (558)
Q Consensus       286 ~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~-------~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~  358 (558)
                      .++|..+++++.++||+|+||+||+|++.       ++.||||+++... .....++|.+|+.+|++++|||||+++|+|
T Consensus        20 ~~ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~   98 (308)
T 4gt4_A           20 LKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQHPNVVCLLGVV   98 (308)
T ss_dssp             CCBCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C-CC-CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc-ChHHHHHHHHHHHHHHhCCCCCCCCcceEE
Confidence            34677889999999999999999999873       4679999998543 334567899999999999999999999999


Q ss_pred             cCCCCceeEEEecCCCCHHHHHHhh---------------ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEe
Q 008656          359 TKPPSLCIVTEFMSGGSVYDYLHKL---------------KGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM  423 (558)
Q Consensus       359 ~~~~~~~lV~E~~~ggsL~~~l~~~---------------~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl  423 (558)
                      ..++.+|||||||++|+|.++|...               ...+++..++.|+.||+.||+|||+++||||||||+|||+
T Consensus        99 ~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl  178 (308)
T 4gt4_A           99 TKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLV  178 (308)
T ss_dssp             CSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred             EECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEE
Confidence            9999999999999999999999653               2458999999999999999999999999999999999999


Q ss_pred             CCCCcEEEEecCcceecccC---CccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHH
Q 008656          424 DENEVVKVADFGVARVKAQS---GVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAV  499 (558)
Q Consensus       424 ~~~~~vkL~DFG~a~~~~~~---~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~  499 (558)
                      ++++.+||+|||+++.....   ...+...||+.|||||++.++.|+.++|||||||+||||+| |..||.+.+..+...
T Consensus       179 ~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~  258 (308)
T 4gt4_A          179 YDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVE  258 (308)
T ss_dssp             CGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHH
T ss_pred             CCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            99999999999999865433   23445679999999999999999999999999999999999 899999998877665


Q ss_pred             HHHhcCCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHH
Q 008656          500 GVVQKGLRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQI  546 (558)
Q Consensus       500 ~v~~~~~r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l  546 (558)
                      . +..+.+++.|..+++++.+||.+||+.||.+||||.||++.|+.+
T Consensus       259 ~-i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          259 M-IRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             H-HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             H-HHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            5 455667788999999999999999999999999999999998753


No 5  
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00  E-value=1.1e-56  Score=471.18  Aligned_cols=264  Identities=33%  Similarity=0.630  Sum_probs=235.8

Q ss_pred             CceeeCCCceeeeeeeeecCceEEEEEEECC-------ceEEEEEecCCCCChHHHHHHHHHHHHHHhccC-CCceEEEe
Q 008656          285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCS-------QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRH-KNVVQFIG  356 (558)
Q Consensus       285 ~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~~-------~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~H-pnIv~l~g  356 (558)
                      +.|+|..++|+++++||+|+||.||+|++.+       +.||||+++... .....+.|.+|+.+|++++| ||||+++|
T Consensus        57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~-~~~~~~~~~~E~~il~~l~hhpnIV~l~g  135 (353)
T 4ase_A           57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLG  135 (353)
T ss_dssp             HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc-ChHHHHHHHHHHHHHHHcCCCCcEEEEEE
Confidence            5799999999999999999999999999754       469999998653 34456789999999999976 89999999


Q ss_pred             eecCC-CCceeEEEecCCCCHHHHHHhhc---------------cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCc
Q 008656          357 ACTKP-PSLCIVTEFMSGGSVYDYLHKLK---------------GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAAN  420 (558)
Q Consensus       357 ~~~~~-~~~~lV~E~~~ggsL~~~l~~~~---------------~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~N  420 (558)
                      +|..+ ..+|||||||+||+|.++|+...               ..+++..++.|+.||+.||+|||+++||||||||+|
T Consensus       136 ~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~N  215 (353)
T 4ase_A          136 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARN  215 (353)
T ss_dssp             EECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             EEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccc
Confidence            98664 56899999999999999997642               348899999999999999999999999999999999


Q ss_pred             EEeCCCCcEEEEecCcceecccCC---ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHH
Q 008656          421 LLMDENEVVKVADFGVARVKAQSG---VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQ  496 (558)
Q Consensus       421 ILl~~~~~vkL~DFG~a~~~~~~~---~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~  496 (558)
                      ||+++++.+||+|||+|+......   ......||+.|||||++.+..|+.++|||||||+||||+| |+.||.+.+..+
T Consensus       216 ILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~  295 (353)
T 4ase_A          216 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE  295 (353)
T ss_dssp             EEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH
T ss_pred             eeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHH
Confidence            999999999999999998654432   2234568999999999999999999999999999999998 999999988777


Q ss_pred             HHHHHHhcCCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHH
Q 008656          497 AAVGVVQKGLRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKE  549 (558)
Q Consensus       497 ~~~~v~~~~~r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~  549 (558)
                      .....+..+.++..|..+++++.+||.+||+.||.+||||.||++.|+++++.
T Consensus       296 ~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~  348 (353)
T 4ase_A          296 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  348 (353)
T ss_dssp             HHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence            77777888899999999999999999999999999999999999999998764


No 6  
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00  E-value=1.5e-56  Score=468.43  Aligned_cols=250  Identities=26%  Similarity=0.477  Sum_probs=221.9

Q ss_pred             CCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeEE
Q 008656          291 PKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVT  368 (558)
Q Consensus       291 ~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV~  368 (558)
                      .++|+++++||+|+||.||+|++.  ++.||||+++.........+.+.+|+.+|++++|||||++++++.+++.+||||
T Consensus        23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm  102 (350)
T 4b9d_A           23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM  102 (350)
T ss_dssp             CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence            468999999999999999999984  788999999888777777788999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccCC-cc
Q 008656          369 EFMSGGSVYDYLHKLK-GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSG-VM  446 (558)
Q Consensus       369 E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~-~~  446 (558)
                      |||+||+|.++|...+ ..+++..++.|+.||+.||+|||++|||||||||+||||+.+|.+||+|||+|+...... ..
T Consensus       103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~  182 (350)
T 4b9d_A          103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELA  182 (350)
T ss_dssp             ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHH
T ss_pred             eCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCcccc
Confidence            9999999999997644 457899999999999999999999999999999999999999999999999998765432 33


Q ss_pred             ccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhh
Q 008656          447 TAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELLERCW  526 (558)
Q Consensus       447 ~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~~Ll~~cL  526 (558)
                      +..+||+.|||||++.+..|+.++|||||||+||||++|+.||.+.+..+....+.... .+.++..+++++.+||.+||
T Consensus       183 ~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~-~~~~~~~~s~~~~~li~~~L  261 (350)
T 4b9d_A          183 RACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGS-FPPVSLHYSYDLRSLVSQLF  261 (350)
T ss_dssp             HHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTC-CCCCCTTSCHHHHHHHHHHT
T ss_pred             cccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCC-CCCCCccCCHHHHHHHHHHc
Confidence            45679999999999999999999999999999999999999999999888877766544 45678889999999999999


Q ss_pred             hcCCCCCCCHHHHHH
Q 008656          527 QQDPALRPDFSEIIE  541 (558)
Q Consensus       527 ~~dP~~RPs~~ell~  541 (558)
                      ++||.+|||+.|+++
T Consensus       262 ~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          262 KRNPRDRPSVNSILE  276 (350)
T ss_dssp             CSSGGGSCCHHHHHT
T ss_pred             cCChhHCcCHHHHhc
Confidence            999999999999975


No 7  
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00  E-value=1.1e-55  Score=459.79  Aligned_cols=257  Identities=24%  Similarity=0.368  Sum_probs=224.6

Q ss_pred             eeeCCCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCc
Q 008656          287 WEIDPKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSL  364 (558)
Q Consensus       287 ~~i~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~  364 (558)
                      +......|++.++||+|+||.||+|++.  |+.||||+++.+...       .+|+.+|++++|||||++++++.+++.+
T Consensus        53 ~~~~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~-------~~E~~il~~l~HpnIV~l~~~~~~~~~~  125 (336)
T 4g3f_A           53 YREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-------VEELVACAGLSSPRIVPLYGAVREGPWV  125 (336)
T ss_dssp             CCBTTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-------THHHHTTTTCCCTTBCCEEEEEEETTEE
T ss_pred             hhcchhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhH-------HHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence            3445578999999999999999999984  788999999865432       4699999999999999999999999999


Q ss_pred             eeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCC-cEEEEecCcceecccC
Q 008656          365 CIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENE-VVKVADFGVARVKAQS  443 (558)
Q Consensus       365 ~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~-~vkL~DFG~a~~~~~~  443 (558)
                      |||||||+||+|.+++++ .+.+++..++.|+.||+.||+|||++|||||||||+||||+.+| .+||+|||+|+.....
T Consensus       126 ~ivmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~  204 (336)
T 4g3f_A          126 NIFMELLEGGSLGQLIKQ-MGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD  204 (336)
T ss_dssp             EEEECCCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC---
T ss_pred             EEEEeccCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCC
Confidence            999999999999999976 57899999999999999999999999999999999999999987 6999999999876543


Q ss_pred             Cc------cccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCC-CCCCCCCcH
Q 008656          444 GV------MTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLR-PTIPKNSQP  516 (558)
Q Consensus       444 ~~------~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r-~~ip~~~~~  516 (558)
                      ..      ....+||+.|||||++.+.+|+.++|||||||+||||++|+.||.+.+..+....+...... ..+|..+++
T Consensus       205 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~  284 (336)
T 4g3f_A          205 GLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAP  284 (336)
T ss_dssp             ---------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCH
T ss_pred             CcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccCCH
Confidence            21      12347999999999999999999999999999999999999999887766666665554332 247789999


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHH
Q 008656          517 KLAELLERCWQQDPALRPDFSEIIEILQQIAKEVY  551 (558)
Q Consensus       517 ~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~~  551 (558)
                      .+.+||.+||++||.+|||+.|+++.|..+++++.
T Consensus       285 ~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~  319 (336)
T 4g3f_A          285 LTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVG  319 (336)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhh
Confidence            99999999999999999999999999999988764


No 8  
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00  E-value=6.9e-56  Score=456.40  Aligned_cols=248  Identities=23%  Similarity=0.419  Sum_probs=223.1

Q ss_pred             CCCceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCC-ChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCcee
Q 008656          290 DPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERI-NSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCI  366 (558)
Q Consensus       290 ~~~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~-~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~l  366 (558)
                      .+++|++++.||+|+||+||++++  +++.||||+++.... .....+.+.+|+.+|++++|||||++++++.+++.+||
T Consensus        30 ~~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yi  109 (311)
T 4aw0_A           30 RPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYF  109 (311)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             CccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence            346799999999999999999998  478899999975432 22345779999999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccC---
Q 008656          367 VTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQS---  443 (558)
Q Consensus       367 V~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~---  443 (558)
                      |||||+||+|.+++.+ .+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+|+.....   
T Consensus       110 vmEy~~gG~L~~~i~~-~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~  188 (311)
T 4aw0_A          110 GLSYAKNGELLKYIRK-IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ  188 (311)
T ss_dssp             EECCCTTEEHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC
T ss_pred             EEecCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc
Confidence            9999999999999986 578999999999999999999999999999999999999999999999999999876433   


Q ss_pred             CccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHH
Q 008656          444 GVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELLE  523 (558)
Q Consensus       444 ~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~~Ll~  523 (558)
                      ......+||+.|||||++.++.|+.++|||||||++|+|++|+.||.+.+..+....+....  ..+|..+++++.+||.
T Consensus       189 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~--~~~p~~~s~~~~dli~  266 (311)
T 4aw0_A          189 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLE--YDFPEKFFPKARDLVE  266 (311)
T ss_dssp             CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC--CCCCTTCCHHHHHHHH
T ss_pred             ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC--CCCCcccCHHHHHHHH
Confidence            23456789999999999999999999999999999999999999999998888777776543  4678899999999999


Q ss_pred             HhhhcCCCCCCCHHHHH
Q 008656          524 RCWQQDPALRPDFSEII  540 (558)
Q Consensus       524 ~cL~~dP~~RPs~~ell  540 (558)
                      +||++||.+|||+.|++
T Consensus       267 ~lL~~dp~~R~t~~e~~  283 (311)
T 4aw0_A          267 KLLVLDATKRLGCEEME  283 (311)
T ss_dssp             HHSCSSGGGSTTSGGGT
T ss_pred             HHccCCHhHCcChHHHc
Confidence            99999999999999864


No 9  
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00  E-value=5e-55  Score=446.56  Aligned_cols=245  Identities=29%  Similarity=0.563  Sum_probs=215.5

Q ss_pred             eeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecC----CCCceeE
Q 008656          294 LKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTK----PPSLCIV  367 (558)
Q Consensus       294 ~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~----~~~~~lV  367 (558)
                      |++.++||+|+||.||+|.+.  ++.||+|++..........+.|.+|+.+|++++|||||+++++|..    +..+|||
T Consensus        28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv  107 (290)
T 3fpq_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV  107 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence            588889999999999999985  6789999998777777777889999999999999999999999854    4568999


Q ss_pred             EEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCcEEeCC-CCcEEEEecCcceecccCC
Q 008656          368 TEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN--IIHRDLKAANLLMDE-NEVVKVADFGVARVKAQSG  444 (558)
Q Consensus       368 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~g--IiHrDLKp~NILl~~-~~~vkL~DFG~a~~~~~~~  444 (558)
                      ||||+||+|.+++.+ .+.+++..++.|+.||+.||+|||++|  ||||||||+|||++. +|.+||+|||+|+.... .
T Consensus       108 mEy~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~-~  185 (290)
T 3fpq_A          108 TELMTSGTLKTYLKR-FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA-S  185 (290)
T ss_dssp             EECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT-T
T ss_pred             EeCCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC-C
Confidence            999999999999986 578999999999999999999999999  999999999999984 78999999999975443 3


Q ss_pred             ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCC-CCCCCCcHHHHHHHH
Q 008656          445 VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRP-TIPKNSQPKLAELLE  523 (558)
Q Consensus       445 ~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~-~ip~~~~~~l~~Ll~  523 (558)
                      .....+||+.|||||++.+ .|+.++|||||||+||||+||+.||.+.+........+..+..+ .++..+++++.+||.
T Consensus       186 ~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~  264 (290)
T 3fpq_A          186 FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIE  264 (290)
T ss_dssp             SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHH
T ss_pred             ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHHHHH
Confidence            4456789999999999976 59999999999999999999999998876666555555555443 466778899999999


Q ss_pred             HhhhcCCCCCCCHHHHHH
Q 008656          524 RCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       524 ~cL~~dP~~RPs~~ell~  541 (558)
                      +||..||.+|||+.|+++
T Consensus       265 ~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          265 GCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             HHSCSSGGGSCCHHHHHT
T ss_pred             HHccCChhHCcCHHHHhc
Confidence            999999999999999875


No 10 
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00  E-value=5.9e-55  Score=455.74  Aligned_cols=245  Identities=29%  Similarity=0.478  Sum_probs=218.7

Q ss_pred             CceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeEEE
Q 008656          292 KHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTE  369 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV~E  369 (558)
                      +.|++.++||+|+||.||+|++.  |+.||||+++.....  ..+.+.+|+.+|++++|||||++++++.+++.+|||||
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~--~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmE  151 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ--RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME  151 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS--SGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchh--HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            46999999999999999999984  788999999755332  23568899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccC-Ccccc
Q 008656          370 FMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQS-GVMTA  448 (558)
Q Consensus       370 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~-~~~~~  448 (558)
                      ||+||+|.+++.+  +.+++..++.|+.||+.||+|||++|||||||||+||||+.+|.+||+|||+|+..... ...+.
T Consensus       152 y~~gg~L~~~l~~--~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~  229 (346)
T 4fih_A          152 FLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS  229 (346)
T ss_dssp             CCTTEEHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCC
T ss_pred             CCCCCcHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccc
Confidence            9999999999975  67999999999999999999999999999999999999999999999999999876544 34567


Q ss_pred             CCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCC--CCCCCCcHHHHHHHHHhh
Q 008656          449 ETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRP--TIPKNSQPKLAELLERCW  526 (558)
Q Consensus       449 ~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~--~ip~~~~~~l~~Ll~~cL  526 (558)
                      .+||+.|||||++.+..|+.++|||||||++|||++|+.||.+.++.+....+.. ...+  ..+..+++++.+||.+||
T Consensus       230 ~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~-~~~~~~~~~~~~s~~~~dli~~~L  308 (346)
T 4fih_A          230 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD-NLPPRLKNLHKVSPSLKGFLDRLL  308 (346)
T ss_dssp             CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH-SSCCCCSCGGGSCHHHHHHHHHHS
T ss_pred             cccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHc-CCCCCCCccccCCHHHHHHHHHHc
Confidence            7899999999999999999999999999999999999999999888877665544 3333  334578999999999999


Q ss_pred             hcCCCCCCCHHHHHH
Q 008656          527 QQDPALRPDFSEIIE  541 (558)
Q Consensus       527 ~~dP~~RPs~~ell~  541 (558)
                      ++||.+|||+.|+++
T Consensus       309 ~~dP~~R~ta~e~l~  323 (346)
T 4fih_A          309 VRDPAQRATAAELLK  323 (346)
T ss_dssp             CSSTTTSCCHHHHTT
T ss_pred             CCChhHCcCHHHHhc
Confidence            999999999999875


No 11 
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=9.1e-55  Score=441.28  Aligned_cols=246  Identities=27%  Similarity=0.488  Sum_probs=205.1

Q ss_pred             CceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeEE
Q 008656          292 KHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERIN-SDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVT  368 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~-~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV~  368 (558)
                      ++|++.+.||+|+||.||+|++  +++.||||+++..... .+....+.+|+.+|++++|||||++++++.+++.+||||
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            5799999999999999999987  4789999999866443 344577999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccCCcccc
Q 008656          369 EFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTA  448 (558)
Q Consensus       369 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~  448 (558)
                      ||+ +|+|.+++.+ .+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+..........
T Consensus        93 Ey~-~g~L~~~l~~-~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~  170 (275)
T 3hyh_A           93 EYA-GNELFDYIVQ-RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT  170 (275)
T ss_dssp             ECC-CEEHHHHHHH-SCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC-----------
T ss_pred             eCC-CCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCCccCC
Confidence            999 7899999976 57899999999999999999999999999999999999999999999999999987766666667


Q ss_pred             CCCCCCccchhhhcCCCC-CchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhhh
Q 008656          449 ETGTYRWMAPEVIEHKPY-DHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELLERCWQ  527 (558)
Q Consensus       449 ~~gt~~y~APEv~~~~~~-s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~~Ll~~cL~  527 (558)
                      .+||+.|||||++.+..| +.++|||||||++|+|++|+.||.+.+..+....+...  .+.+|..+++++.+||.+||+
T Consensus       171 ~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~li~~~L~  248 (275)
T 3hyh_A          171 SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG--VYTLPKFLSPGAAGLIKRMLI  248 (275)
T ss_dssp             ----CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT--CCCCCTTSCHHHHHHHHHHSC
T ss_pred             eeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHcc
Confidence            899999999999999887 57999999999999999999999988877666655543  356788999999999999999


Q ss_pred             cCCCCCCCHHHHHH
Q 008656          528 QDPALRPDFSEIIE  541 (558)
Q Consensus       528 ~dP~~RPs~~ell~  541 (558)
                      .||.+|||+.|+++
T Consensus       249 ~dP~~R~s~~eil~  262 (275)
T 3hyh_A          249 VNPLNRISIHEIMQ  262 (275)
T ss_dssp             SSGGGSCCHHHHHH
T ss_pred             CChhHCcCHHHHHc
Confidence            99999999999976


No 12 
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00  E-value=7.4e-56  Score=455.35  Aligned_cols=251  Identities=27%  Similarity=0.440  Sum_probs=217.4

Q ss_pred             eeCCCceeeeeeeeecCceEEEEEEE-----CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCC
Q 008656          288 EIDPKHLKFGSKVASGSYGDLYRGTY-----CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPP  362 (558)
Q Consensus       288 ~i~~~~~~i~~~LG~GsfG~Vy~g~~-----~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~  362 (558)
                      .+++++|++++.||+|+||+||+|+.     +++.||||+++...........+.+|+.+|++++|||||++++++.+++
T Consensus        20 ~~~p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~   99 (304)
T 3ubd_A           20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEG   99 (304)
T ss_dssp             CCCGGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETT
T ss_pred             cCCccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC
Confidence            56778999999999999999999987     3567999999865443333456888999999999999999999999999


Q ss_pred             CceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceeccc
Q 008656          363 SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ  442 (558)
Q Consensus       363 ~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~  442 (558)
                      .+|||||||+||+|.+++.+ .+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+|+....
T Consensus       100 ~~~ivmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~  178 (304)
T 3ubd_A          100 KLYLILDFLRGGDLFTRLSK-EVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID  178 (304)
T ss_dssp             EEEEEECCCTTCEEHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred             EEEEEEEcCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence            99999999999999999987 56899999999999999999999999999999999999999999999999999986543


Q ss_pred             C-CccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHH
Q 008656          443 S-GVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAEL  521 (558)
Q Consensus       443 ~-~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~~L  521 (558)
                      . ......+||+.|||||++.+..|+.++|||||||++|||+||+.||.+.+..+....+...  .+.+|..+++++.+|
T Consensus       179 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~l  256 (304)
T 3ubd_A          179 HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA--KLGMPQFLSPEAQSL  256 (304)
T ss_dssp             --CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCCCTTSCHHHHHH
T ss_pred             CCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcC--CCCCCCcCCHHHHHH
Confidence            3 3455678999999999999999999999999999999999999999999988887777654  356788999999999


Q ss_pred             HHHhhhcCCCCCCCH-----HHHHH
Q 008656          522 LERCWQQDPALRPDF-----SEIIE  541 (558)
Q Consensus       522 l~~cL~~dP~~RPs~-----~ell~  541 (558)
                      |.+||++||.+|||+     +|+++
T Consensus       257 i~~~L~~dP~~R~ta~~~~~~eil~  281 (304)
T 3ubd_A          257 LRMLFKRNPANRLGAGPDGVEEIKR  281 (304)
T ss_dssp             HHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred             HHHHcccCHHHCCCCCcCCHHHHHc
Confidence            999999999999984     56663


No 13 
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00  E-value=8.7e-54  Score=457.61  Aligned_cols=246  Identities=29%  Similarity=0.457  Sum_probs=219.4

Q ss_pred             CceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeEEE
Q 008656          292 KHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTE  369 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV~E  369 (558)
                      +.|++.++||+|+||.||+|++.  |+.||||+++.....  ..+.+.+|+.+|++++|||||++++++..++.+|||||
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~--~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmE  228 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ--RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME  228 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS--SGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchh--HHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEe
Confidence            46999999999999999999984  788999999765332  23568899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccC-Ccccc
Q 008656          370 FMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQS-GVMTA  448 (558)
Q Consensus       370 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~-~~~~~  448 (558)
                      ||+||+|.+++..  +.+++..+..|+.||+.||+|||++|||||||||+||||+.+|.+||+|||+|+..... .....
T Consensus       229 y~~gG~L~~~i~~--~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~  306 (423)
T 4fie_A          229 FLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS  306 (423)
T ss_dssp             CCTTEEHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCC
T ss_pred             CCCCCcHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCccccc
Confidence            9999999999965  57999999999999999999999999999999999999999999999999999876544 34567


Q ss_pred             CCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHhhh
Q 008656          449 ETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKG-LRPTIPKNSQPKLAELLERCWQ  527 (558)
Q Consensus       449 ~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~-~r~~ip~~~~~~l~~Ll~~cL~  527 (558)
                      .+||+.|||||++.+..|+.++|||||||++|||++|+.||.+.++.+....+.... .....+..+++++.+||.+||.
T Consensus       307 ~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~  386 (423)
T 4fie_A          307 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLV  386 (423)
T ss_dssp             CEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHHHSC
T ss_pred             cccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCcccccCCHHHHHHHHHHcC
Confidence            789999999999999999999999999999999999999999998888776654432 1233456789999999999999


Q ss_pred             cCCCCCCCHHHHHH
Q 008656          528 QDPALRPDFSEIIE  541 (558)
Q Consensus       528 ~dP~~RPs~~ell~  541 (558)
                      .||.+|||+.|+++
T Consensus       387 ~dP~~R~ta~ell~  400 (423)
T 4fie_A          387 RDPAQRATAAELLK  400 (423)
T ss_dssp             SSTTTSCCHHHHTT
T ss_pred             CChhHCcCHHHHhc
Confidence            99999999999875


No 14 
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=2.2e-53  Score=437.10  Aligned_cols=253  Identities=27%  Similarity=0.517  Sum_probs=208.2

Q ss_pred             CceeeeeeeeecCceEEEEEEECCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCC----CceeE
Q 008656          292 KHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPP----SLCIV  367 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~----~~~lV  367 (558)
                      ++|.+.++||+|+||+||+|+++|+.||||+++...   .....+..|+..+.+++|||||+++++|..++    .+|||
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV   79 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV   79 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEECCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence            468899999999999999999999999999997542   22223345677778899999999999997543    47999


Q ss_pred             EEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC--------CceeccCCCCcEEeCCCCcEEEEecCccee
Q 008656          368 TEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQN--------NIIHRDLKAANLLMDENEVVKVADFGVARV  439 (558)
Q Consensus       368 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~--------gIiHrDLKp~NILl~~~~~vkL~DFG~a~~  439 (558)
                      ||||+||+|.++++.  ..+++..+.+++.|++.||+|||++        +||||||||+|||++.++.+||+|||+|+.
T Consensus        80 ~Ey~~~gsL~~~l~~--~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~  157 (303)
T 3hmm_A           80 SDYHEHGSLFDYLNR--YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR  157 (303)
T ss_dssp             EECCTTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred             ecCCCCCcHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcc
Confidence            999999999999975  5689999999999999999999987        999999999999999999999999999987


Q ss_pred             cccCCc-----cccCCCCCCccchhhhcCC------CCCchHHHHHHHHHHHHHHcCCCCC----------CCC-----C
Q 008656          440 KAQSGV-----MTAETGTYRWMAPEVIEHK------PYDHKADVFSFGIVLWELLTGKLPY----------EYL-----T  493 (558)
Q Consensus       440 ~~~~~~-----~~~~~gt~~y~APEv~~~~------~~s~ksDVwSlGilL~elltG~~Pf----------~~~-----~  493 (558)
                      ......     .....||+.|||||++.+.      .|+.++|||||||+||||+||..||          ...     .
T Consensus       158 ~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~  237 (303)
T 3hmm_A          158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS  237 (303)
T ss_dssp             EETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred             ccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccch
Confidence            654332     2235799999999999765      4778999999999999999997655          322     2


Q ss_pred             HHHHHHHHHhcCCCCCCCCCC-----cHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHH
Q 008656          494 PLQAAVGVVQKGLRPTIPKNS-----QPKLAELLERCWQQDPALRPDFSEIIEILQQIAKE  549 (558)
Q Consensus       494 ~~~~~~~v~~~~~r~~ip~~~-----~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~  549 (558)
                      ..+....+.....+|.+|...     +..+.+||.+||+.||.+||||.|+++.|+++.++
T Consensus       238 ~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~  298 (303)
T 3hmm_A          238 VEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             HHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence            233344455667788877543     35789999999999999999999999999998764


No 15 
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00  E-value=6.6e-52  Score=425.51  Aligned_cols=246  Identities=24%  Similarity=0.407  Sum_probs=193.6

Q ss_pred             CceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCC-------
Q 008656          292 KHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPP-------  362 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~-------  362 (558)
                      ++|++++.||+|+||.||+|++.  ++.||||+++... .....+.+.+|+.+|++++|||||++++++...+       
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~   83 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP   83 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence            36899999999999999999985  7889999997653 3445678999999999999999999999986433       


Q ss_pred             -----CceeEEEecCCCCHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecC
Q 008656          363 -----SLCIVTEFMSGGSVYDYLHKLKG--VFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFG  435 (558)
Q Consensus       363 -----~~~lV~E~~~ggsL~~~l~~~~~--~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG  435 (558)
                           .+|||||||+||+|.+++.....  ..+...++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||
T Consensus        84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFG  163 (299)
T 4g31_A           84 SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFG  163 (299)
T ss_dssp             ---CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCC
T ss_pred             cCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCc
Confidence                 36999999999999999976322  24556688999999999999999999999999999999999999999999


Q ss_pred             cceecccCC-------------ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Q 008656          436 VARVKAQSG-------------VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVV  502 (558)
Q Consensus       436 ~a~~~~~~~-------------~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~  502 (558)
                      +|+......             ..+..+||+.|||||++.+..|+.++|||||||++|||++   ||............+
T Consensus       164 la~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~~~  240 (299)
T 4g31_A          164 LVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLTDV  240 (299)
T ss_dssp             CC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHH
T ss_pred             cceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHHHH
Confidence            998654322             1234579999999999999999999999999999999996   776533222222222


Q ss_pred             hcCCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          503 QKGLRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       503 ~~~~r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                      .....|..+...++.+.+||.+||+.||.+|||+.|+++
T Consensus       241 ~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  279 (299)
T 4g31_A          241 RNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE  279 (299)
T ss_dssp             HTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             hcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            222223333445677899999999999999999999976


No 16 
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00  E-value=8.7e-51  Score=432.89  Aligned_cols=248  Identities=23%  Similarity=0.344  Sum_probs=213.5

Q ss_pred             CceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecC------CCC
Q 008656          292 KHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTK------PPS  363 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~------~~~  363 (558)
                      ++|+++++||+|+||+||+|++  +|+.||||+++.........+.+.+|+.+|++++|||||++++++..      .+.
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            5799999999999999999998  47889999998776666667889999999999999999999998753      467


Q ss_pred             ceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccC
Q 008656          364 LCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQS  443 (558)
Q Consensus       364 ~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~  443 (558)
                      +|||||||+ |+|.+++.+ .+.+++..+..|+.||+.||+|||++|||||||||+|||++.+|.+||+|||+|+.....
T Consensus       134 ~~ivmE~~~-g~L~~~i~~-~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~  211 (398)
T 4b99_A          134 VYVVLDLME-SDLHQIIHS-SQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTS  211 (398)
T ss_dssp             EEEEEECCS-EEHHHHHTS-SSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC---
T ss_pred             EEEEEeCCC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecccC
Confidence            899999995 689999976 578999999999999999999999999999999999999999999999999999864332


Q ss_pred             -----CccccCCCCCCccchhhhcCC-CCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCC--------
Q 008656          444 -----GVMTAETGTYRWMAPEVIEHK-PYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPT--------  509 (558)
Q Consensus       444 -----~~~~~~~gt~~y~APEv~~~~-~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~--------  509 (558)
                           ...+..+||+.|||||++.+. .|+.++||||+||++|||++|+.||.+.+..+....+......+.        
T Consensus       212 ~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~  291 (398)
T 4b99_A          212 PAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVG  291 (398)
T ss_dssp             ----CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC---
T ss_pred             ccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhh
Confidence                 244567899999999998875 569999999999999999999999999888776665543221111        


Q ss_pred             ---------------------CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          510 ---------------------IPKNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       510 ---------------------ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                                           +...+++++.+||.+||.+||.+|||+.|+++
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  344 (398)
T 4b99_A          292 AERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR  344 (398)
T ss_dssp             --CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             hhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence                                 11346889999999999999999999999875


No 17 
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00  E-value=6.3e-49  Score=403.52  Aligned_cols=269  Identities=42%  Similarity=0.742  Sum_probs=232.0

Q ss_pred             CCCceeeCCCceeeeeeeeecCceEEEEEEECCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCC
Q 008656          283 GTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPP  362 (558)
Q Consensus       283 ~~~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~  362 (558)
                      ..+.|++...+|++.++||+|+||.||+|++.++.||||++............+.+|+.++++++||||+++++++...+
T Consensus        28 ~~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~  107 (309)
T 3p86_A           28 DGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP  107 (309)
T ss_dssp             ----CBCCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred             CcccccCChhHceeeeEeecCCCeEEEEEEECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC
Confidence            34577888999999999999999999999999999999999887767777788999999999999999999999999999


Q ss_pred             CceeEEEecCCCCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCcEEeCCCCcEEEEecCcce
Q 008656          363 SLCIVTEFMSGGSVYDYLHKLK--GVFKLPSLLKVAIDVSKGMNYLHQNN--IIHRDLKAANLLMDENEVVKVADFGVAR  438 (558)
Q Consensus       363 ~~~lV~E~~~ggsL~~~l~~~~--~~l~~~~~~~i~~qI~~aL~yLH~~g--IiHrDLKp~NILl~~~~~vkL~DFG~a~  438 (558)
                      .+++||||++|++|.+++....  ..+++..++.++.||+.||+|||++|  |+||||||+|||++.++.+||+|||+++
T Consensus       108 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~  187 (309)
T 3p86_A          108 NLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR  187 (309)
T ss_dssp             CCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC---
T ss_pred             ceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCc
Confidence            9999999999999999997643  23899999999999999999999999  9999999999999999999999999997


Q ss_pred             ecccCC-ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHH
Q 008656          439 VKAQSG-VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPK  517 (558)
Q Consensus       439 ~~~~~~-~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~  517 (558)
                      ...... ......||+.|+|||++.+..++.++||||||+++|+|++|..||...++.+....+.....+..++..+++.
T Consensus       188 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (309)
T 3p86_A          188 LKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQ  267 (309)
T ss_dssp             --------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHH
T ss_pred             cccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHH
Confidence            554432 2345679999999999999999999999999999999999999999999888777776677778889999999


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHH
Q 008656          518 LAELLERCWQQDPALRPDFSEIIEILQQIAKEVY  551 (558)
Q Consensus       518 l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~~  551 (558)
                      +.+||.+||..||.+|||+.++++.|+.+.+...
T Consensus       268 l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~  301 (309)
T 3p86_A          268 VAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAV  301 (309)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC---
T ss_pred             HHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCC
Confidence            9999999999999999999999999999987654


No 18 
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00  E-value=3.8e-49  Score=438.85  Aligned_cols=248  Identities=23%  Similarity=0.368  Sum_probs=224.7

Q ss_pred             CceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeEEE
Q 008656          292 KHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTE  369 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV~E  369 (558)
                      ++|++++.||+|+||.||++++  +|+.||||+++...  ......+.+|+.+|+.++|||||++++++.++..+|||||
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~--~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E  234 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYE  234 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc--hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence            5799999999999999999998  47889999997643  3445678999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCC--CcEEEEecCcceecccCCccc
Q 008656          370 FMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN--EVVKVADFGVARVKAQSGVMT  447 (558)
Q Consensus       370 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~--~~vkL~DFG~a~~~~~~~~~~  447 (558)
                      ||+||+|.+++....+.+++..+..++.||+.||.|||++||+||||||+|||++.+  +.+||+|||+|+.........
T Consensus       235 ~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~  314 (573)
T 3uto_A          235 FMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK  314 (573)
T ss_dssp             CCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEE
T ss_pred             ecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCcee
Confidence            999999999997767789999999999999999999999999999999999999854  899999999999887776677


Q ss_pred             cCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCC--CCCCCCCcHHHHHHHHHh
Q 008656          448 AETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLR--PTIPKNSQPKLAELLERC  525 (558)
Q Consensus       448 ~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r--~~ip~~~~~~l~~Ll~~c  525 (558)
                      ..+||+.|||||++.+..|+.++|||||||+||+|++|..||.+.+..+....+......  ...+..+++++.+||.+|
T Consensus       315 ~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~  394 (573)
T 3uto_A          315 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKL  394 (573)
T ss_dssp             EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTT
T ss_pred             eeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHH
Confidence            779999999999999999999999999999999999999999999988887777655433  233467899999999999


Q ss_pred             hhcCCCCCCCHHHHHH
Q 008656          526 WQQDPALRPDFSEIIE  541 (558)
Q Consensus       526 L~~dP~~RPs~~ell~  541 (558)
                      |+.||.+||++.|+++
T Consensus       395 L~~dp~~R~t~~e~l~  410 (573)
T 3uto_A          395 LLADPNTRMTIHQALE  410 (573)
T ss_dssp             SCSSGGGSCCHHHHHH
T ss_pred             ccCChhHCcCHHHHhc
Confidence            9999999999999976


No 19 
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00  E-value=2.5e-48  Score=409.01  Aligned_cols=242  Identities=22%  Similarity=0.361  Sum_probs=198.6

Q ss_pred             CceeeeeeeeecCceEEEEEEEC-----CceEEEEEecCCCCChHHHHHHHHHHHHHHhc-cCCCceEEEeeecCCCCce
Q 008656          292 KHLKFGSKVASGSYGDLYRGTYC-----SQDVAIKVLKPERINSDMQKEFAQEVFIMRKV-RHKNVVQFIGACTKPPSLC  365 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~~-----~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l-~HpnIv~l~g~~~~~~~~~  365 (558)
                      ++|++.++||+|+||+||+|+..     ++.||||++....    ....+.+|+.+|+.+ +|||||++++++...+.+|
T Consensus        21 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~----~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~   96 (361)
T 4f9c_A           21 NVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS----HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVV   96 (361)
T ss_dssp             GTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS----CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEE
T ss_pred             CcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc----CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEE
Confidence            56999999999999999999863     5679999987542    235678899999998 6999999999999999999


Q ss_pred             eEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCC-CcEEEEecCcceecccCC
Q 008656          366 IVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN-EVVKVADFGVARVKAQSG  444 (558)
Q Consensus       366 lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~-~~vkL~DFG~a~~~~~~~  444 (558)
                      |||||++||+|.+++.    .+++..++.++.||+.||+|||++||+||||||+|||++.+ +.+||+|||+|+......
T Consensus        97 lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~  172 (361)
T 4f9c_A           97 IAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTK  172 (361)
T ss_dssp             EEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCS
T ss_pred             EEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcc
Confidence            9999999999999984    48999999999999999999999999999999999999876 899999999997543221


Q ss_pred             -----------------------------ccccCCCCCCccchhhhcCC-CCCchHHHHHHHHHHHHHHcCCCCCCCCC-
Q 008656          445 -----------------------------VMTAETGTYRWMAPEVIEHK-PYDHKADVFSFGIVLWELLTGKLPYEYLT-  493 (558)
Q Consensus       445 -----------------------------~~~~~~gt~~y~APEv~~~~-~~s~ksDVwSlGilL~elltG~~Pf~~~~-  493 (558)
                                                   ..+..+||+.|||||++.+. .|+.++||||+||++|||++|+.||...+ 
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~  252 (361)
T 4f9c_A          173 IELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASD  252 (361)
T ss_dssp             CGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSS
T ss_pred             ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCC
Confidence                                         23345799999999999876 58999999999999999999999995443 


Q ss_pred             HHHHHHHHHhc------------------------------------C----------------CCCCCCCCCcHHHHHH
Q 008656          494 PLQAAVGVVQK------------------------------------G----------------LRPTIPKNSQPKLAEL  521 (558)
Q Consensus       494 ~~~~~~~v~~~------------------------------------~----------------~r~~ip~~~~~~l~~L  521 (558)
                      ..+....+...                                    .                ........+++++.+|
T Consensus       253 ~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DL  332 (361)
T 4f9c_A          253 DLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDL  332 (361)
T ss_dssp             HHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHH
T ss_pred             HHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHH
Confidence            32222221110                                    0                0001224578899999


Q ss_pred             HHHhhhcCCCCCCCHHHHHH
Q 008656          522 LERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       522 l~~cL~~dP~~RPs~~ell~  541 (558)
                      |.+||+.||.+|||+.|+++
T Consensus       333 l~~lL~~dP~~R~ta~eaL~  352 (361)
T 4f9c_A          333 LDKLLDLNPASRITAEEALL  352 (361)
T ss_dssp             HHHHTCSCTTTSCCHHHHHT
T ss_pred             HHHHCcCChhHCcCHHHHhc
Confidence            99999999999999999874


No 20 
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=1.7e-47  Score=382.74  Aligned_cols=261  Identities=35%  Similarity=0.717  Sum_probs=232.2

Q ss_pred             CCceeeCCCceeeeeeeeecCceEEEEEEE-CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCC
Q 008656          284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPP  362 (558)
Q Consensus       284 ~~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~-~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~  362 (558)
                      ...|.++.++|++.+.||+|+||.||++.+ .++.||+|+++......   +.+.+|+.++++++||||+++++++....
T Consensus         2 ~~~~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~---~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   78 (269)
T 4hcu_A            2 SGKWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE---EDFIEEAEVMMKLSHPKLVQLYGVCLEQA   78 (269)
T ss_dssp             ---CBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCH---HHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred             CccEEeChhhceeeheecCCCccEEEEEEecCCCeEEEEEecccccCH---HHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence            457899999999999999999999999998 56789999998764433   56899999999999999999999999999


Q ss_pred             CceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceeccc
Q 008656          363 SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ  442 (558)
Q Consensus       363 ~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~  442 (558)
                      ..|+||||++|++|.+++....+.+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+++....
T Consensus        79 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~  158 (269)
T 4hcu_A           79 PICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD  158 (269)
T ss_dssp             SEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred             ceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccccccccccc
Confidence            99999999999999999987777899999999999999999999999999999999999999999999999999975543


Q ss_pred             CC--ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHH
Q 008656          443 SG--VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLA  519 (558)
Q Consensus       443 ~~--~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~  519 (558)
                      ..  ......+|+.|+|||++.+..++.++||||||+++|+|++ |..||...+..+....+ ..+.++..+..+++.+.
T Consensus       159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  237 (269)
T 4hcu_A          159 DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI-STGFRLYKPRLASTHVY  237 (269)
T ss_dssp             HHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH-HTTCCCCCCTTSCHHHH
T ss_pred             cccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH-hcCccCCCCCcCCHHHH
Confidence            22  2334456788999999999999999999999999999999 99999998877665554 44567778888999999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHHHHHHHHH
Q 008656          520 ELLERCWQQDPALRPDFSEIIEILQQIAK  548 (558)
Q Consensus       520 ~Ll~~cL~~dP~~RPs~~ell~~L~~l~~  548 (558)
                      +++.+||+.||.+||++.++++.|+++.+
T Consensus       238 ~li~~~l~~~p~~Rps~~~ll~~l~~l~~  266 (269)
T 4hcu_A          238 QIMNHCWRERPEDRPAFSRLLRQLAEIAE  266 (269)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence            99999999999999999999999999875


No 21 
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00  E-value=8.5e-48  Score=405.83  Aligned_cols=264  Identities=34%  Similarity=0.654  Sum_probs=234.7

Q ss_pred             CCceeeCCCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCC
Q 008656          284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKP  361 (558)
Q Consensus       284 ~~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~  361 (558)
                      .+.|.++.++|++.++||+|+||.||+|++.  ++.||||+++.. ........|.+|+.+|++++||||+++++++...
T Consensus       106 ~~~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~  184 (377)
T 3cbl_A          106 KDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK  184 (377)
T ss_dssp             CCTTBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTT-SCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred             ccccEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEcccc-CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecC
Confidence            3578999999999999999999999999985  788999999854 3445567799999999999999999999999999


Q ss_pred             CCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecc
Q 008656          362 PSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKA  441 (558)
Q Consensus       362 ~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~  441 (558)
                      ..+|+||||++||+|.+++......+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...
T Consensus       185 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~  264 (377)
T 3cbl_A          185 QPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEA  264 (377)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECT
T ss_pred             CCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecC
Confidence            99999999999999999998766779999999999999999999999999999999999999999999999999998654


Q ss_pred             cCCcc---ccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHH
Q 008656          442 QSGVM---TAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPK  517 (558)
Q Consensus       442 ~~~~~---~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~  517 (558)
                      .....   ....++..|+|||++.+..++.++|||||||++|||++ |..||...+..+.. ..+..+.+...|..+++.
T Consensus       265 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  343 (377)
T 3cbl_A          265 DGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTR-EFVEKGGRLPCPELCPDA  343 (377)
T ss_dssp             TSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHH-HHHHTTCCCCCCTTCCHH
T ss_pred             CCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH-HHHHcCCCCCCCCCCCHH
Confidence            33211   11234678999999999999999999999999999998 99999998876654 345567778888999999


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHH
Q 008656          518 LAELLERCWQQDPALRPDFSEIIEILQQIAKE  549 (558)
Q Consensus       518 l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~  549 (558)
                      +.+||.+||+.||.+|||+.++++.|+++.+.
T Consensus       344 l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~  375 (377)
T 3cbl_A          344 VFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR  375 (377)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence            99999999999999999999999999998764


No 22 
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00  E-value=4e-48  Score=432.55  Aligned_cols=248  Identities=27%  Similarity=0.410  Sum_probs=210.1

Q ss_pred             CCCceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCC----ChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCC
Q 008656          290 DPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERI----NSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS  363 (558)
Q Consensus       290 ~~~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~----~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~  363 (558)
                      ..++|++++.||+|+||.||+++.  +|+.||||+++....    ..........++.+++.++|||||++++++.++..
T Consensus       187 slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~  266 (689)
T 3v5w_A          187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK  266 (689)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSE
T ss_pred             chHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCE
Confidence            346899999999999999999998  478899999975432    11222333445667778899999999999999999


Q ss_pred             ceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccC
Q 008656          364 LCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQS  443 (558)
Q Consensus       364 ~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~  443 (558)
                      +|||||||+||+|.++|.+ .+.+++..++.++.||+.||+|||++|||||||||+||||+.+|++||+|||+|+.....
T Consensus       267 lylVmEy~~GGdL~~~l~~-~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~  345 (689)
T 3v5w_A          267 LSFILDLMNGGDLHYHLSQ-HGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK  345 (689)
T ss_dssp             EEEEECCCCSCBHHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred             EEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeecCCC
Confidence            9999999999999999987 578999999999999999999999999999999999999999999999999999876543


Q ss_pred             CccccCCCCCCccchhhhc-CCCCCchHHHHHHHHHHHHHHcCCCCCCCCC---HHHHHHHHHhcCCCCCCCCCCcHHHH
Q 008656          444 GVMTAETGTYRWMAPEVIE-HKPYDHKADVFSFGIVLWELLTGKLPYEYLT---PLQAAVGVVQKGLRPTIPKNSQPKLA  519 (558)
Q Consensus       444 ~~~~~~~gt~~y~APEv~~-~~~~s~ksDVwSlGilL~elltG~~Pf~~~~---~~~~~~~v~~~~~r~~ip~~~~~~l~  519 (558)
                       .....+||+.|||||++. +..|+.++|||||||+||||++|..||.+.+   ..+....+..  ..+.+|..+++++.
T Consensus       346 -~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~--~~~~~p~~~S~~a~  422 (689)
T 3v5w_A          346 -KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT--MAVELPDSFSPELR  422 (689)
T ss_dssp             -CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHH--CCCCCCTTSCHHHH
T ss_pred             -CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcC--CCCCCCccCCHHHH
Confidence             345678999999999996 4689999999999999999999999997532   2233333333  34567889999999


Q ss_pred             HHHHHhhhcCCCCCCC-----HHHHHH
Q 008656          520 ELLERCWQQDPALRPD-----FSEIIE  541 (558)
Q Consensus       520 ~Ll~~cL~~dP~~RPs-----~~ell~  541 (558)
                      +||.+||++||.+|++     +.|+++
T Consensus       423 dLI~~lL~~dP~~Rl~~~~~ga~ei~~  449 (689)
T 3v5w_A          423 SLLEGLLQRDVNRRLGCLGRGAQEVKE  449 (689)
T ss_dssp             HHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred             HHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence            9999999999999998     677764


No 23 
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00  E-value=1.7e-47  Score=380.83  Aligned_cols=258  Identities=32%  Similarity=0.623  Sum_probs=234.4

Q ss_pred             eeeCCCceeeeeeeeecCceEEEEEEECCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCC--CCc
Q 008656          287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKP--PSL  364 (558)
Q Consensus       287 ~~i~~~~~~i~~~LG~GsfG~Vy~g~~~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~--~~~  364 (558)
                      +.++.++|++.+.||+|+||.||+|++.++.||||+++.........+.+.+|+.++++++||||+++++++..+  ...
T Consensus         5 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   84 (271)
T 3kmu_A            5 SGIDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHP   84 (271)
T ss_dssp             CCCCGGGCEEEEEEEEETTEEEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSC
T ss_pred             CCCCHHHhHHHHHhcCCCcceEEEEEECCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCe
Confidence            467778999999999999999999999999999999998776777778899999999999999999999999876  788


Q ss_pred             eeEEEecCCCCHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCcEEeCCCCcEEEEecCcceecc
Q 008656          365 CIVTEFMSGGSVYDYLHKLKG-VFKLPSLLKVAIDVSKGMNYLHQNN--IIHRDLKAANLLMDENEVVKVADFGVARVKA  441 (558)
Q Consensus       365 ~lV~E~~~ggsL~~~l~~~~~-~l~~~~~~~i~~qI~~aL~yLH~~g--IiHrDLKp~NILl~~~~~vkL~DFG~a~~~~  441 (558)
                      ++||||++|++|.+++....+ .+++..++.++.||+.||.|||++|  |+||||||+||+++.++.++|+|||++....
T Consensus        85 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~  164 (271)
T 3kmu_A           85 TLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ  164 (271)
T ss_dssp             EEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS
T ss_pred             EeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeec
Confidence            999999999999999987443 5899999999999999999999999  9999999999999999999999999875432


Q ss_pred             cCCccccCCCCCCccchhhhcCCCCCc---hHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHH
Q 008656          442 QSGVMTAETGTYRWMAPEVIEHKPYDH---KADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKL  518 (558)
Q Consensus       442 ~~~~~~~~~gt~~y~APEv~~~~~~s~---ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l  518 (558)
                      .    ....||+.|+|||++.+..++.   ++||||||+++|+|++|..||...+..+....+...+.++.++..+++.+
T Consensus       165 ~----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (271)
T 3kmu_A          165 S----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHV  240 (271)
T ss_dssp             C----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCTTCCHHH
T ss_pred             c----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCCCCCCCHHH
Confidence            2    3456899999999998765544   89999999999999999999999999888888888888899999999999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHHHHH
Q 008656          519 AELLERCWQQDPALRPDFSEIIEILQQIAK  548 (558)
Q Consensus       519 ~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~  548 (558)
                      .++|.+||+.||.+|||+.++++.|+++.+
T Consensus       241 ~~li~~~l~~~p~~Rps~~~il~~L~~l~~  270 (271)
T 3kmu_A          241 SKLMKICMNEDPAKRPKFDMIVPILEKMQD  270 (271)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence            999999999999999999999999998753


No 24 
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00  E-value=5.9e-47  Score=388.23  Aligned_cols=267  Identities=36%  Similarity=0.695  Sum_probs=228.5

Q ss_pred             CCCCceeeCCCceeeeeeeeecCceEEEEEEECCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCC
Q 008656          282 DGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKP  361 (558)
Q Consensus       282 ~~~~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~  361 (558)
                      +....|+++.++|++.++||+|+||.||+|.+.+ .+|+|+++.........+.+.+|+.++++++||||+++++++.. 
T Consensus        26 ~~~~~~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-  103 (307)
T 3lb7_A           26 DSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-  103 (307)
T ss_dssp             ---CCCBCCTTSCCEEEEEEECSSCEEEEEESSS-EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-
T ss_pred             CcCceEEecccceEEEeEecCCCCeEEEEEEECC-EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-
Confidence            3456889999999999999999999999998755 69999998776666777889999999999999999999998764 


Q ss_pred             CCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecc
Q 008656          362 PSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKA  441 (558)
Q Consensus       362 ~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~  441 (558)
                      +.+++||||+.|++|.+++......+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...
T Consensus       104 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~  183 (307)
T 3lb7_A          104 DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS  183 (307)
T ss_dssp             SSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCSSSEEECTTSCEEECCCCSSCC--
T ss_pred             CcEEEEEecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeeCCCChhhEEEcCCCCEEEccCCCceecc
Confidence            56899999999999999998777889999999999999999999999999999999999999999999999999997543


Q ss_pred             c---CCccccCCCCCCccchhhhc---CCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCC----CCC
Q 008656          442 Q---SGVMTAETGTYRWMAPEVIE---HKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRP----TIP  511 (558)
Q Consensus       442 ~---~~~~~~~~gt~~y~APEv~~---~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~----~ip  511 (558)
                      .   ........||+.|+|||++.   +..++.++||||||+++|+|++|+.||...+..+.....+..+...    .++
T Consensus       184 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (307)
T 3lb7_A          184 RWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLY  263 (307)
T ss_dssp             ----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTCCCCCSTTSC
T ss_pred             cccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCCCCcchhhhh
Confidence            2   22334557999999999996   6779999999999999999999999999887766655555444332    244


Q ss_pred             CCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHH
Q 008656          512 KNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKEV  550 (558)
Q Consensus       512 ~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~  550 (558)
                      ..+++.+.+||.+||+.+|.+||++.++++.|+.+...+
T Consensus       264 ~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~  302 (307)
T 3lb7_A          264 KNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL  302 (307)
T ss_dssp             SSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred             cCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence            678999999999999999999999999999999887544


No 25 
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00  E-value=4.9e-47  Score=393.48  Aligned_cols=248  Identities=28%  Similarity=0.493  Sum_probs=226.5

Q ss_pred             CCceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeEE
Q 008656          291 PKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVT  368 (558)
Q Consensus       291 ~~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV~  368 (558)
                      ..+|++.+.||+|+||.||+|++  +++.||||++.....+......+.+|+.+|+.++||||+++++++...+.+|+||
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   93 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM   93 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence            35799999999999999999997  5789999999877667777788999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccCCcccc
Q 008656          369 EFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTA  448 (558)
Q Consensus       369 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~  448 (558)
                      ||++|++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..........
T Consensus        94 e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  172 (328)
T 3fe3_A           94 EYASGGEVFDYLVA-HGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDA  172 (328)
T ss_dssp             CCCTTCBHHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGGGT
T ss_pred             ECCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCcccc
Confidence            99999999999976 46799999999999999999999999999999999999999999999999999987766666777


Q ss_pred             CCCCCCccchhhhcCCCCC-chHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhhh
Q 008656          449 ETGTYRWMAPEVIEHKPYD-HKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELLERCWQ  527 (558)
Q Consensus       449 ~~gt~~y~APEv~~~~~~s-~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~~Ll~~cL~  527 (558)
                      ..||+.|+|||++.+..++ .++|||||||++|+|++|+.||.+.+..+....+....  ..+|..+++++.+||.+||.
T Consensus       173 ~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~--~~~p~~~s~~~~~li~~~L~  250 (328)
T 3fe3_A          173 FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK--YRIPFYMSTDCENLLKRFLV  250 (328)
T ss_dssp             TSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--CCCCTTSCHHHHHHHHHHCC
T ss_pred             ccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--CCCCCCCCHHHHHHHHHHCC
Confidence            8899999999999988876 79999999999999999999999988877766665543  45778899999999999999


Q ss_pred             cCCCCCCCHHHHHH
Q 008656          528 QDPALRPDFSEIIE  541 (558)
Q Consensus       528 ~dP~~RPs~~ell~  541 (558)
                      .||.+|||+.|+++
T Consensus       251 ~dP~~R~t~~eil~  264 (328)
T 3fe3_A          251 LNPIKRGTLEQIMK  264 (328)
T ss_dssp             SSTTTSCCHHHHTT
T ss_pred             CChhHCcCHHHHhc
Confidence            99999999999875


No 26 
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00  E-value=5.4e-47  Score=381.37  Aligned_cols=263  Identities=33%  Similarity=0.678  Sum_probs=231.6

Q ss_pred             CCCceeeCCCceeeeeeeeecCceEEEEEEECC-ceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCC
Q 008656          283 GTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCS-QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKP  361 (558)
Q Consensus       283 ~~~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~~-~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~  361 (558)
                      +...|+++.++|++.++||+|+||.||++.+.+ ..||||+++......   ..+.+|+.++++++||||+++++++...
T Consensus        15 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~---~~~~~E~~~l~~l~h~~i~~~~~~~~~~   91 (283)
T 3gen_A           15 GYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLYGVCTKQ   91 (283)
T ss_dssp             -CCTTBCCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCH---HHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred             CCCCccCCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCH---HHHHHHHHHHhcCCCCCEeeEEEEEecC
Confidence            345789999999999999999999999999865 579999998765443   5688999999999999999999999999


Q ss_pred             CCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecc
Q 008656          362 PSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKA  441 (558)
Q Consensus       362 ~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~  441 (558)
                      ...|+||||++|++|.+++......+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+++...
T Consensus        92 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~  171 (283)
T 3gen_A           92 RPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL  171 (283)
T ss_dssp             SSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBC
T ss_pred             CCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEcccccccccc
Confidence            99999999999999999998767789999999999999999999999999999999999999999999999999997554


Q ss_pred             cCC--ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHH
Q 008656          442 QSG--VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKL  518 (558)
Q Consensus       442 ~~~--~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l  518 (558)
                      ...  ......+|+.|+|||++.+..++.++||||||+++|+|++ |..||...+..+.... +..+.+...+..+++.+
T Consensus       172 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l  250 (283)
T 3gen_A          172 DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH-IAQGLRLYRPHLASEKV  250 (283)
T ss_dssp             CHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH-HHTTCCCCCCTTCCHHH
T ss_pred             ccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHH-HhcccCCCCCCcCCHHH
Confidence            322  2234456788999999999999999999999999999998 9999999887776655 44566777888899999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHHHHHH
Q 008656          519 AELLERCWQQDPALRPDFSEIIEILQQIAKE  549 (558)
Q Consensus       519 ~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~  549 (558)
                      .++|.+||+.||.+||++.++++.|+++.++
T Consensus       251 ~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~  281 (283)
T 3gen_A          251 YTIMYSCWHEKADERPTFKILLSNILDVMDE  281 (283)
T ss_dssp             HHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence            9999999999999999999999999999865


No 27 
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00  E-value=8.1e-47  Score=397.79  Aligned_cols=264  Identities=31%  Similarity=0.629  Sum_probs=232.1

Q ss_pred             CceeeCCCceeeeeeeeecCceEEEEEEEC---------CceEEEEEecCCCCChHHHHHHHHHHHHHHhc-cCCCceEE
Q 008656          285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYC---------SQDVAIKVLKPERINSDMQKEFAQEVFIMRKV-RHKNVVQF  354 (558)
Q Consensus       285 ~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~---------~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l-~HpnIv~l  354 (558)
                      ..|++..++|++++.||+|+||.||+|++.         +..||||+++... .......+.+|+.+|+.+ +||||+++
T Consensus        74 ~~~~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpnIv~~  152 (370)
T 2psq_A           74 PKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINL  152 (370)
T ss_dssp             TTTBCCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC-BHHHHHHHHHHHHHHHHSCCCTTBCCE
T ss_pred             ccccccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc-CHHHHHHHHHHHHHHHHhcCCCCEeeE
Confidence            356788899999999999999999999873         2459999998653 345567899999999999 89999999


Q ss_pred             EeeecCCCCceeEEEecCCCCHHHHHHhhc---------------cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCC
Q 008656          355 IGACTKPPSLCIVTEFMSGGSVYDYLHKLK---------------GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAA  419 (558)
Q Consensus       355 ~g~~~~~~~~~lV~E~~~ggsL~~~l~~~~---------------~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~  419 (558)
                      ++++...+.+|+||||++||+|.+++....               ..+++..++.++.||+.||.|||++||+||||||+
T Consensus       153 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~  232 (370)
T 2psq_A          153 LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR  232 (370)
T ss_dssp             EEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGG
T ss_pred             EEEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchh
Confidence            999999999999999999999999997643               24789999999999999999999999999999999


Q ss_pred             cEEeCCCCcEEEEecCcceecccCC---ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHH
Q 008656          420 NLLMDENEVVKVADFGVARVKAQSG---VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPL  495 (558)
Q Consensus       420 NILl~~~~~vkL~DFG~a~~~~~~~---~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~  495 (558)
                      |||++.++.+||+|||+++......   ......+|+.|+|||++.+..|+.++|||||||++|||++ |..||.+....
T Consensus       233 NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~  312 (370)
T 2psq_A          233 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE  312 (370)
T ss_dssp             GEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG
T ss_pred             hEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence            9999999999999999998654432   2334467889999999999999999999999999999999 99999987765


Q ss_pred             HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHH
Q 008656          496 QAAVGVVQKGLRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKEV  550 (558)
Q Consensus       496 ~~~~~v~~~~~r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~  550 (558)
                      +.. ..+..+.++..|..+++.+.+||.+||+.||.+||++.|+++.|++++...
T Consensus       313 ~~~-~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~  366 (370)
T 2psq_A          313 ELF-KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT  366 (370)
T ss_dssp             GHH-HHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHH-HHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence            544 345566778888999999999999999999999999999999999998754


No 28 
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00  E-value=7.7e-47  Score=390.42  Aligned_cols=263  Identities=34%  Similarity=0.602  Sum_probs=231.0

Q ss_pred             ceeeCCCceeeeeeeeecCceEEEEEEEC-----CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecC
Q 008656          286 VWEIDPKHLKFGSKVASGSYGDLYRGTYC-----SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTK  360 (558)
Q Consensus       286 ~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~-----~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~  360 (558)
                      .+++..++|++.+.||+|+||.||+|.+.     +..||||+++... .....+.+.+|+.++++++||||+++++++..
T Consensus        43 ~~~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  121 (325)
T 3kul_A           43 TREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY-TERQRRDFLSEASIMGQFDHPNIIRLEGVVTR  121 (325)
T ss_dssp             CCBCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECG
T ss_pred             ccccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence            34677889999999999999999999984     3459999998643 45556789999999999999999999999999


Q ss_pred             CCCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceec
Q 008656          361 PPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVK  440 (558)
Q Consensus       361 ~~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~  440 (558)
                      ....|+||||++|++|.+++....+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus       122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  201 (325)
T 3kul_A          122 GRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL  201 (325)
T ss_dssp             GGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred             CCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCccccc
Confidence            99999999999999999999876778999999999999999999999999999999999999999999999999999865


Q ss_pred             ccCC----ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCc
Q 008656          441 AQSG----VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQ  515 (558)
Q Consensus       441 ~~~~----~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~  515 (558)
                      ....    ......+|+.|+|||++.+..++.++||||||+++|+|++ |..||...+..+....+ ..+.+...+..++
T Consensus       202 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~  280 (325)
T 3kul_A          202 EDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV-EEGYRLPAPMGCP  280 (325)
T ss_dssp             C----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHH-HTTCCCCCCTTCC
T ss_pred             ccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHH-HcCCCCCCCCCcC
Confidence            4432    2223456788999999999999999999999999999999 99999998887766554 4456777888999


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHH
Q 008656          516 PKLAELLERCWQQDPALRPDFSEIIEILQQIAKEV  550 (558)
Q Consensus       516 ~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~  550 (558)
                      +.+.+||.+||..||.+||++.++++.|+.+.+..
T Consensus       281 ~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~  315 (325)
T 3kul_A          281 HALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP  315 (325)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999987643


No 29 
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00  E-value=7.3e-47  Score=408.36  Aligned_cols=258  Identities=35%  Similarity=0.685  Sum_probs=229.0

Q ss_pred             CceeeCCCceeeeeeeeecCceEEEEEEECCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCC-C
Q 008656          285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPP-S  363 (558)
Q Consensus       285 ~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~-~  363 (558)
                      ..|+++.++|++.++||+|+||.||+|++.++.||||+++...    ..+.|.+|+.+|++++||||+++++++.... .
T Consensus       186 ~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~  261 (450)
T 1k9a_A          186 SGWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG  261 (450)
T ss_dssp             TTCBCCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEESSCT----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSC
T ss_pred             cccccChHHeEEEeeecCcCCeeEEEEEecCCeEEEEEeCCch----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCc
Confidence            4689999999999999999999999999999999999998653    2467999999999999999999999976654 7


Q ss_pred             ceeEEEecCCCCHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceeccc
Q 008656          364 LCIVTEFMSGGSVYDYLHKLKG-VFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ  442 (558)
Q Consensus       364 ~~lV~E~~~ggsL~~~l~~~~~-~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~  442 (558)
                      +|+||||+++|+|.+++..... .++...++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus       262 ~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~  341 (450)
T 1k9a_A          262 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS  341 (450)
T ss_dssp             EEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC-
T ss_pred             eEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccc
Confidence            8999999999999999987543 379999999999999999999999999999999999999999999999999985443


Q ss_pred             CCccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHH
Q 008656          443 SGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAEL  521 (558)
Q Consensus       443 ~~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~~L  521 (558)
                      .  .....++..|+|||++.+..++.++||||||+++|||++ |..||...+..+.... +..+.++..|..+++.+.+|
T Consensus       342 ~--~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~-i~~~~~~~~p~~~~~~l~~l  418 (450)
T 1k9a_A          342 T--QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR-VEKGYKMDAPDGCPPAVYDV  418 (450)
T ss_dssp             -------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHH-HHTTCCCCCCTTCCHHHHHH
T ss_pred             c--ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HHcCCCCCCCCcCCHHHHHH
Confidence            2  223467889999999999999999999999999999998 9999998876655543 45677888999999999999


Q ss_pred             HHHhhhcCCCCCCCHHHHHHHHHHHHHH
Q 008656          522 LERCWQQDPALRPDFSEIIEILQQIAKE  549 (558)
Q Consensus       522 l~~cL~~dP~~RPs~~ell~~L~~l~~~  549 (558)
                      |.+||+.||.+|||+.++++.|+++.+.
T Consensus       419 i~~cl~~dp~~Rpt~~~l~~~L~~i~~~  446 (450)
T 1k9a_A          419 MKNCWHLDAATRPTFLQLREQLEHIRTH  446 (450)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence            9999999999999999999999988753


No 30 
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00  E-value=7.2e-47  Score=383.16  Aligned_cols=262  Identities=28%  Similarity=0.533  Sum_probs=221.8

Q ss_pred             eeeCCCceeeeeeeeecCceEEEEEEE------CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecC
Q 008656          287 WEIDPKHLKFGSKVASGSYGDLYRGTY------CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTK  360 (558)
Q Consensus       287 ~~i~~~~~~i~~~LG~GsfG~Vy~g~~------~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~  360 (558)
                      .++..++|++.++||+|+||.||++++      .++.||||+++..  .....+.+.+|+.++++++||||+++++++..
T Consensus         5 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   82 (295)
T 3ugc_A            5 TQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYS   82 (295)
T ss_dssp             -CCCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECH
T ss_pred             CcCCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence            366778999999999999999999986      4678999999854  45556789999999999999999999998853


Q ss_pred             --CCCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcce
Q 008656          361 --PPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR  438 (558)
Q Consensus       361 --~~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~  438 (558)
                        ...+++||||+++++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++
T Consensus        83 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~  162 (295)
T 3ugc_A           83 AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK  162 (295)
T ss_dssp             HHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC
T ss_pred             CCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCcccc
Confidence              456899999999999999998876779999999999999999999999999999999999999999999999999998


Q ss_pred             ecccCC----ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHH---------------HHHH
Q 008656          439 VKAQSG----VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPL---------------QAAV  499 (558)
Q Consensus       439 ~~~~~~----~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~---------------~~~~  499 (558)
                      ......    ......++..|+|||++.+..++.++||||||+++|+|++|..||......               ....
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (295)
T 3ugc_A          163 VLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI  242 (295)
T ss_dssp             -------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHH
T ss_pred             cccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHH
Confidence            654432    223345778899999999999999999999999999999999998643211               1223


Q ss_pred             HHHhcCCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHH
Q 008656          500 GVVQKGLRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKEV  550 (558)
Q Consensus       500 ~v~~~~~r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~  550 (558)
                      ..+....+...+..+++++.+||.+||..||.+|||+.++++.|+++.+++
T Consensus       243 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l  293 (295)
T 3ugc_A          243 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM  293 (295)
T ss_dssp             HHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred             HHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence            334556677788899999999999999999999999999999999998754


No 31 
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00  E-value=6.4e-47  Score=383.16  Aligned_cols=265  Identities=36%  Similarity=0.730  Sum_probs=218.5

Q ss_pred             CCCCceeeCCCceeeeeeeeecCceEEEEEEECCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCC
Q 008656          282 DGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKP  361 (558)
Q Consensus       282 ~~~~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~  361 (558)
                      .+.+.++|..++|++.++||+|+||.||+|++.+ .||+|+++.........+.+.+|+.++++++||||+++++++ ..
T Consensus        14 ~~~~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~~-~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~   91 (289)
T 3og7_A           14 DAADDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TA   91 (289)
T ss_dssp             ----CCBCCTTSCEEEEEEEECSSEEEEEEESSS-EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CS
T ss_pred             CCCCCCccCccceeeeeEecCCCCeEEEEEEEcC-ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cC
Confidence            3456779999999999999999999999998765 599999998776777778899999999999999999999965 45


Q ss_pred             CCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecc
Q 008656          362 PSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKA  441 (558)
Q Consensus       362 ~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~  441 (558)
                      ...++||||+.|++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus        92 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~  171 (289)
T 3og7_A           92 PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKS  171 (289)
T ss_dssp             SSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC------
T ss_pred             CccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceeccccc
Confidence            67899999999999999998767789999999999999999999999999999999999999999999999999997544


Q ss_pred             c---CCccccCCCCCCccchhhhc---CCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCC----CCC
Q 008656          442 Q---SGVMTAETGTYRWMAPEVIE---HKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRP----TIP  511 (558)
Q Consensus       442 ~---~~~~~~~~gt~~y~APEv~~---~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~----~ip  511 (558)
                      .   ........||+.|+|||++.   +..++.++||||||+++|+|++|..||............+..+...    .++
T Consensus       172 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (289)
T 3og7_A          172 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVR  251 (289)
T ss_dssp             ------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSC
T ss_pred             cccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhcc
Confidence            3   22334557999999999996   6778999999999999999999999999877666665555444322    234


Q ss_pred             CCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHH
Q 008656          512 KNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAK  548 (558)
Q Consensus       512 ~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~  548 (558)
                      ..+++.+.+||.+||..||.+||++.++++.|+++.+
T Consensus       252 ~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~  288 (289)
T 3og7_A          252 SNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR  288 (289)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             ccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence            5789999999999999999999999999999998754


No 32 
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00  E-value=1.3e-46  Score=375.58  Aligned_cols=260  Identities=32%  Similarity=0.615  Sum_probs=230.4

Q ss_pred             ceeeCCCceeeeeeeeecCceEEEEEEECC-ceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCc
Q 008656          286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCS-QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSL  364 (558)
Q Consensus       286 ~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~~-~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~  364 (558)
                      .|++..++|++.+.||+|+||.||++.+.+ ..||+|+++.....   ...+.+|+.++++++||||+++++++......
T Consensus         2 ~~~l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   78 (268)
T 3sxs_A            2 HMELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS---EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPI   78 (268)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBC---HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSE
T ss_pred             ceEechhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCc---HHHHHHHHHHHHhCCCCCEeeEEEEEccCCce
Confidence            467888999999999999999999999865 47999999876443   35689999999999999999999999999999


Q ss_pred             eeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccCC
Q 008656          365 CIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSG  444 (558)
Q Consensus       365 ~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~  444 (558)
                      ++||||++|++|.+++......+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.......
T Consensus        79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~  158 (268)
T 3sxs_A           79 YIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ  158 (268)
T ss_dssp             EEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC
T ss_pred             EEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchhh
Confidence            99999999999999998866779999999999999999999999999999999999999999999999999998665443


Q ss_pred             c--cccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHH
Q 008656          445 V--MTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAEL  521 (558)
Q Consensus       445 ~--~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~~L  521 (558)
                      .  .....+|+.|+|||++.+..++.++||||||+++|+|++ |..||...+.......+ ..+.....+..+++.+.++
T Consensus       159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l  237 (268)
T 3sxs_A          159 YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKV-SQGHRLYRPHLASDTIYQI  237 (268)
T ss_dssp             EEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH-HTTCCCCCCTTSCHHHHHH
T ss_pred             hhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHH-HcCCCCCCCCcChHHHHHH
Confidence            2  233456778999999999999999999999999999999 99999988887766554 4455667788889999999


Q ss_pred             HHHhhhcCCCCCCCHHHHHHHHHHHHHH
Q 008656          522 LERCWQQDPALRPDFSEIIEILQQIAKE  549 (558)
Q Consensus       522 l~~cL~~dP~~RPs~~ell~~L~~l~~~  549 (558)
                      +.+||+.||.+|||+.++++.|+.+.+.
T Consensus       238 i~~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (268)
T 3sxs_A          238 MYSCWHELPEKRPTFQQLLSSIEPLREK  265 (268)
T ss_dssp             HHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred             HHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence            9999999999999999999999887543


No 33 
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00  E-value=9.7e-47  Score=392.33  Aligned_cols=266  Identities=32%  Similarity=0.625  Sum_probs=233.0

Q ss_pred             CCceeeCCCceeeeeeeeecCceEEEEEEEC-------CceEEEEEecCCCCChHHHHHHHHHHHHHHhc-cCCCceEEE
Q 008656          284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYC-------SQDVAIKVLKPERINSDMQKEFAQEVFIMRKV-RHKNVVQFI  355 (558)
Q Consensus       284 ~~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~-------~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l-~HpnIv~l~  355 (558)
                      ...|++..++|++.++||+|+||.||+|++.       ++.||||+++... .....+.+.+|+.+++++ +||||++++
T Consensus        14 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv~~~   92 (359)
T 3vhe_A           14 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLL   92 (359)
T ss_dssp             HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             cccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC-CHHHHHHHHHHHHHHHhhcCCcceeeee
Confidence            3578999999999999999999999999853       3679999998653 344567899999999999 789999999


Q ss_pred             eeecCCC-CceeEEEecCCCCHHHHHHhhcc-------------------------------------------------
Q 008656          356 GACTKPP-SLCIVTEFMSGGSVYDYLHKLKG-------------------------------------------------  385 (558)
Q Consensus       356 g~~~~~~-~~~lV~E~~~ggsL~~~l~~~~~-------------------------------------------------  385 (558)
                      +++...+ .+++||||++||+|.+++.....                                                 
T Consensus        93 ~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (359)
T 3vhe_A           93 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKS  172 (359)
T ss_dssp             EEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------
T ss_pred             eeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccc
Confidence            9987755 48999999999999999976432                                                 


Q ss_pred             ----------------CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccCC---cc
Q 008656          386 ----------------VFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSG---VM  446 (558)
Q Consensus       386 ----------------~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~---~~  446 (558)
                                      .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......   ..
T Consensus       173 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~  252 (359)
T 3vhe_A          173 LSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK  252 (359)
T ss_dssp             -----------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC
T ss_pred             cchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhc
Confidence                            18899999999999999999999999999999999999999999999999997653332   23


Q ss_pred             ccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHh
Q 008656          447 TAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELLERC  525 (558)
Q Consensus       447 ~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~~Ll~~c  525 (558)
                      ....||+.|+|||++.+..++.++||||||+++|+|++ |..||............+..+.....+..+++++.++|.+|
T Consensus       253 ~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  332 (359)
T 3vhe_A          253 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDC  332 (359)
T ss_dssp             --CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHH
T ss_pred             cccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCHHHHHHHHHH
Confidence            34567889999999999999999999999999999998 99999988766666677777778888999999999999999


Q ss_pred             hhcCCCCCCCHHHHHHHHHHHHHHH
Q 008656          526 WQQDPALRPDFSEIIEILQQIAKEV  550 (558)
Q Consensus       526 L~~dP~~RPs~~ell~~L~~l~~~~  550 (558)
                      |+.||.+||++.++++.|+++++..
T Consensus       333 l~~dP~~Rps~~ell~~L~~~~~~~  357 (359)
T 3vhe_A          333 WHGEPSQRPTFSELVEHLGNLLQAN  357 (359)
T ss_dssp             TCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             ccCChhhCCCHHHHHHHHHHHHHHh
Confidence            9999999999999999999998753


No 34 
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00  E-value=1.9e-46  Score=377.85  Aligned_cols=265  Identities=31%  Similarity=0.599  Sum_probs=221.1

Q ss_pred             CceeeCCCceeeeeeeeecCceEEEEEEECC-----ceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeec
Q 008656          285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCS-----QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACT  359 (558)
Q Consensus       285 ~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~~-----~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~  359 (558)
                      ..|++..++|++.+.||+|+||.||+|.+..     ..||+|+++... .......+.+|+.++++++||||+++++++.
T Consensus         8 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~   86 (281)
T 1mp8_A            8 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKLIGVIT   86 (281)
T ss_dssp             -CCBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             cceEEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCccceEEEEEc
Confidence            4678888999999999999999999998743     459999987542 4455678999999999999999999999985


Q ss_pred             CCCCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCccee
Q 008656          360 KPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV  439 (558)
Q Consensus       360 ~~~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~  439 (558)
                       .+..|+||||+++++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus        87 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~  165 (281)
T 1mp8_A           87 -ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY  165 (281)
T ss_dssp             -SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC------
T ss_pred             -cCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccc
Confidence             4578999999999999999987666799999999999999999999999999999999999999999999999999976


Q ss_pred             cccCCc--cccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcH
Q 008656          440 KAQSGV--MTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQP  516 (558)
Q Consensus       440 ~~~~~~--~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~  516 (558)
                      ......  .....+|+.|+|||++.+..++.++||||||+++|+|++ |..||...+..+.... +..+.+..++..+++
T Consensus       166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~-i~~~~~~~~~~~~~~  244 (281)
T 1mp8_A          166 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR-IENGERLPMPPNCPP  244 (281)
T ss_dssp             -------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHH-HHTTCCCCCCTTCCH
T ss_pred             cCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHH-HHcCCCCCCCCCCCH
Confidence            544332  233456789999999999999999999999999999997 9999998876655444 344556678889999


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHh
Q 008656          517 KLAELLERCWQQDPALRPDFSEIIEILQQIAKEVYS  552 (558)
Q Consensus       517 ~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~~~  552 (558)
                      .+.++|.+||..||.+||++.++++.|+++.++.+.
T Consensus       245 ~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~  280 (281)
T 1mp8_A          245 TLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKA  280 (281)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhcc
Confidence            999999999999999999999999999999887654


No 35 
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00  E-value=1.6e-46  Score=375.13  Aligned_cols=256  Identities=36%  Similarity=0.713  Sum_probs=218.5

Q ss_pred             eeCCCceeeeeeeeecCceEEEEEEECCceEEEEEecCCCCC--hHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCce
Q 008656          288 EIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERIN--SDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLC  365 (558)
Q Consensus       288 ~i~~~~~~i~~~LG~GsfG~Vy~g~~~~~~VAIKvlk~~~~~--~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~  365 (558)
                      +++.++|++.+.||+|+||.||+|.+.++.||||+++.....  ....+.+.+|+.+++.++||||+++++++..++..|
T Consensus         3 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (271)
T 3dtc_A            3 EIDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLC   82 (271)
T ss_dssp             BCCTTSEEEEEEEEEETTEEEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CE
T ss_pred             ccchhheeeeeeeccCCCeEEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceE
Confidence            567789999999999999999999999999999998764322  233567899999999999999999999999999999


Q ss_pred             eEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCCCcEEeCC--------CCcEEEEec
Q 008656          366 IVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN---IIHRDLKAANLLMDE--------NEVVKVADF  434 (558)
Q Consensus       366 lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~g---IiHrDLKp~NILl~~--------~~~vkL~DF  434 (558)
                      +||||++|++|.+++.  .+.+++..++.++.||+.||.|||++|   |+||||||+|||++.        ++.+||+||
T Consensus        83 lv~e~~~~~~L~~~~~--~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df  160 (271)
T 3dtc_A           83 LVMEFARGGPLNRVLS--GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF  160 (271)
T ss_dssp             EEEECCTTEEHHHHHT--SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred             EEEEcCCCCCHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence            9999999999999995  357999999999999999999999999   999999999999986        678999999


Q ss_pred             CcceecccCCccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCCCC
Q 008656          435 GVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNS  514 (558)
Q Consensus       435 G~a~~~~~~~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~  514 (558)
                      |+++...... .....||+.|+|||++.+..++.++||||||+++|+|++|+.||...+.......+........++..+
T Consensus       161 g~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (271)
T 3dtc_A          161 GLAREWHRTT-KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTC  239 (271)
T ss_dssp             CC--------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCCCTTC
T ss_pred             Cccccccccc-ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCCCccc
Confidence            9997554432 234579999999999999999999999999999999999999999999888888877777778888999


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHH
Q 008656          515 QPKLAELLERCWQQDPALRPDFSEIIEILQQI  546 (558)
Q Consensus       515 ~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l  546 (558)
                      ++.+.+++.+||+.||.+|||+.++++.|++|
T Consensus       240 ~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          240 PEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             CHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence            99999999999999999999999999999764


No 36 
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=3.6e-46  Score=371.40  Aligned_cols=259  Identities=36%  Similarity=0.728  Sum_probs=230.9

Q ss_pred             ceeeCCCceeeeeeeeecCceEEEEEEE-CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCc
Q 008656          286 VWEIDPKHLKFGSKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSL  364 (558)
Q Consensus       286 ~~~i~~~~~~i~~~LG~GsfG~Vy~g~~-~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~  364 (558)
                      .|.++.++|++.+.||+|+||.||++.+ .++.||+|+++.....   .+.+.+|+.++++++||||+++++++..++..
T Consensus         2 ~~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   78 (267)
T 3t9t_A            2 KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPI   78 (267)
T ss_dssp             -CBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBC---HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSC
T ss_pred             ceEEchhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCC---HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCe
Confidence            5889999999999999999999999998 4668999999876443   35789999999999999999999999999999


Q ss_pred             eeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccCC
Q 008656          365 CIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSG  444 (558)
Q Consensus       365 ~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~  444 (558)
                      ++||||++|++|.+++....+.+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+++......
T Consensus        79 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~  158 (267)
T 3t9t_A           79 CLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ  158 (267)
T ss_dssp             EEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH
T ss_pred             EEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEccccccccccccc
Confidence            99999999999999998866789999999999999999999999999999999999999999999999999997553321


Q ss_pred             --ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHH
Q 008656          445 --VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAEL  521 (558)
Q Consensus       445 --~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~~L  521 (558)
                        ......++..|+|||++.+..++.++||||||+++|+|++ |..||...+..+.... +..+.+...+..+++.+.++
T Consensus       159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~-i~~~~~~~~~~~~~~~l~~l  237 (267)
T 3t9t_A          159 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED-ISTGFRLYKPRLASTHVYQI  237 (267)
T ss_dssp             HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH-HHTTCCCCCCTTSCHHHHHH
T ss_pred             ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHH-HhcCCcCCCCccCcHHHHHH
Confidence              2234457889999999999999999999999999999999 8999998887766554 44456677788899999999


Q ss_pred             HHHhhhcCCCCCCCHHHHHHHHHHHHH
Q 008656          522 LERCWQQDPALRPDFSEIIEILQQIAK  548 (558)
Q Consensus       522 l~~cL~~dP~~RPs~~ell~~L~~l~~  548 (558)
                      +.+||..||.+||++.++++.|+++.+
T Consensus       238 i~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (267)
T 3t9t_A          238 MNHCWRERPEDRPAFSRLLRQLAEIAE  264 (267)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            999999999999999999999999875


No 37 
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00  E-value=3.4e-46  Score=380.14  Aligned_cols=267  Identities=30%  Similarity=0.620  Sum_probs=236.9

Q ss_pred             CCceeeCCCceeeeeeeeecCceEEEEEEE-------CCceEEEEEecCCCCChHHHHHHHHHHHHHHhc-cCCCceEEE
Q 008656          284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTY-------CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKV-RHKNVVQFI  355 (558)
Q Consensus       284 ~~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~-------~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l-~HpnIv~l~  355 (558)
                      ...|++..++|++.+.||+|+||.||+|++       .++.||||+++... .......+.+|+.+++++ +||||++++
T Consensus        15 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~   93 (313)
T 1t46_A           15 DHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHMNIVNLL   93 (313)
T ss_dssp             CGGGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             ccccccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch-hHHHHHHHHHHHHHHhhcccCCCeeeEE
Confidence            457899999999999999999999999986       34679999998653 334567899999999999 899999999


Q ss_pred             eeecCCCCceeEEEecCCCCHHHHHHhhcc-----------------CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCC
Q 008656          356 GACTKPPSLCIVTEFMSGGSVYDYLHKLKG-----------------VFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKA  418 (558)
Q Consensus       356 g~~~~~~~~~lV~E~~~ggsL~~~l~~~~~-----------------~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp  418 (558)
                      +++..++..++||||+++|+|.+++.....                 .+++..++.++.||+.||.|||++||+||||||
T Consensus        94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp  173 (313)
T 1t46_A           94 GACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAA  173 (313)
T ss_dssp             EEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             EEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCcc
Confidence            999999999999999999999999976433                 489999999999999999999999999999999


Q ss_pred             CcEEeCCCCcEEEEecCcceecccCCc---cccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCH
Q 008656          419 ANLLMDENEVVKVADFGVARVKAQSGV---MTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTP  494 (558)
Q Consensus       419 ~NILl~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~  494 (558)
                      +||+++.++.+||+|||+++.......   .....||+.|+|||++.+..++.++||||||+++|+|++ |..||.....
T Consensus       174 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~  253 (313)
T 1t46_A          174 RNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV  253 (313)
T ss_dssp             GGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCS
T ss_pred             ceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccc
Confidence            999999999999999999976554332   223456788999999999999999999999999999999 9999998876


Q ss_pred             HHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHH
Q 008656          495 LQAAVGVVQKGLRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKEVY  551 (558)
Q Consensus       495 ~~~~~~v~~~~~r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~~  551 (558)
                      .......+....++..+..+++.+.++|.+||..||.+||++.++++.|+++..+..
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~  310 (313)
T 1t46_A          254 DSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST  310 (313)
T ss_dssp             SHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred             hhHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhh
Confidence            666667777777778888999999999999999999999999999999999987653


No 38 
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00  E-value=7.6e-47  Score=386.06  Aligned_cols=263  Identities=33%  Similarity=0.535  Sum_probs=224.1

Q ss_pred             eeeCCCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCc
Q 008656          287 WEIDPKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSL  364 (558)
Q Consensus       287 ~~i~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~  364 (558)
                      +.+..++|+++++||+|+||.||++++.  ++.||+|++...  .....+.+.+|+.++++++||||+++++++..++..
T Consensus         5 ~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   82 (310)
T 3s95_A            5 RIFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF--DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRL   82 (310)
T ss_dssp             EEECGGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEE
T ss_pred             eeeChhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCee
Confidence            4577889999999999999999999985  788999988643  456678899999999999999999999999999999


Q ss_pred             eeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccCC
Q 008656          365 CIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSG  444 (558)
Q Consensus       365 ~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~  444 (558)
                      ++||||++|++|.+++......+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus        83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  162 (310)
T 3s95_A           83 NFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK  162 (310)
T ss_dssp             EEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC---
T ss_pred             EEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceeccccc
Confidence            99999999999999998877789999999999999999999999999999999999999999999999999997654332


Q ss_pred             cc---------------ccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHH-HHhcCCCC
Q 008656          445 VM---------------TAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVG-VVQKGLRP  508 (558)
Q Consensus       445 ~~---------------~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~-v~~~~~r~  508 (558)
                      ..               ....||+.|+|||++.+..++.++||||||+++|+|++|..||....+...... ........
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~  242 (310)
T 3s95_A          163 TQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDR  242 (310)
T ss_dssp             -----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHH
T ss_pred             ccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccc
Confidence            11               145799999999999999999999999999999999999999865432110000 00011112


Q ss_pred             CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHH
Q 008656          509 TIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKEVY  551 (558)
Q Consensus       509 ~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~~  551 (558)
                      ..+..+++.+.++|.+||+.||.+|||+.++++.|+++...+.
T Consensus       243 ~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~  285 (310)
T 3s95_A          243 YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLA  285 (310)
T ss_dssp             TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcc
Confidence            3567888999999999999999999999999999999987764


No 39 
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00  E-value=8.2e-46  Score=391.10  Aligned_cols=266  Identities=32%  Similarity=0.622  Sum_probs=235.5

Q ss_pred             CCceeeCCCceeeeeeeeecCceEEEEEEECC---------ceEEEEEecCCCCChHHHHHHHHHHHHHHhc-cCCCceE
Q 008656          284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYCS---------QDVAIKVLKPERINSDMQKEFAQEVFIMRKV-RHKNVVQ  353 (558)
Q Consensus       284 ~~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~~---------~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l-~HpnIv~  353 (558)
                      ...|++..++|+++++||+|+||.||+|++.+         ..||||+++.. ........+.+|+.+++++ +||||++
T Consensus        61 ~~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~  139 (382)
T 3tt0_A           61 DPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIIN  139 (382)
T ss_dssp             CTTTBCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CcccccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccc-cCHHHHHHHHHHHHHHHHhcCCchhhh
Confidence            34678889999999999999999999999743         46999999865 3445567899999999999 8999999


Q ss_pred             EEeeecCCCCceeEEEecCCCCHHHHHHhhc---------------cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCC
Q 008656          354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLK---------------GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKA  418 (558)
Q Consensus       354 l~g~~~~~~~~~lV~E~~~ggsL~~~l~~~~---------------~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp  418 (558)
                      +++++...+..|+||||++||+|.+++....               ..+++..++.++.||+.||.|||++||+||||||
T Consensus       140 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp  219 (382)
T 3tt0_A          140 LLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAA  219 (382)
T ss_dssp             EEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCG
T ss_pred             heeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCc
Confidence            9999999999999999999999999998643               3589999999999999999999999999999999


Q ss_pred             CcEEeCCCCcEEEEecCcceecccCC---ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCH
Q 008656          419 ANLLMDENEVVKVADFGVARVKAQSG---VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTP  494 (558)
Q Consensus       419 ~NILl~~~~~vkL~DFG~a~~~~~~~---~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~  494 (558)
                      +|||++.++.+||+|||+++......   ......+|+.|+|||++.+..++.++|||||||++|+|++ |..||...+.
T Consensus       220 ~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~  299 (382)
T 3tt0_A          220 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV  299 (382)
T ss_dssp             GGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred             ceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence            99999999999999999998654432   3344567889999999999999999999999999999999 9999998877


Q ss_pred             HHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHH
Q 008656          495 LQAAVGVVQKGLRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKEVY  551 (558)
Q Consensus       495 ~~~~~~v~~~~~r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~~  551 (558)
                      .+.. ..+..+.++..+..+++++.+||.+||+.||.+||++.++++.|+++.....
T Consensus       300 ~~~~-~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~  355 (382)
T 3tt0_A          300 EELF-KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS  355 (382)
T ss_dssp             HHHH-HHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSC
T ss_pred             HHHH-HHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence            6554 4455667778889999999999999999999999999999999999987654


No 40 
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.5e-46  Score=389.09  Aligned_cols=267  Identities=30%  Similarity=0.570  Sum_probs=231.0

Q ss_pred             CCceeeCCCceeeeeeeeecCceEEEEEEE-------CCceEEEEEecCCCCChHHHHHHHHHHHHHHhc-cCCCceEEE
Q 008656          284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTY-------CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKV-RHKNVVQFI  355 (558)
Q Consensus       284 ~~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~-------~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l-~HpnIv~l~  355 (558)
                      ...|++..++|++.+.||+|+||.||+|++       .++.||||+++... .......+.+|+.+++++ +||||++++
T Consensus        37 ~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~  115 (344)
T 1rjb_A           37 DLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMTQLGSHENIVNLL  115 (344)
T ss_dssp             CGGGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CcCcccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeEE
Confidence            347899999999999999999999999997       23569999998543 233457899999999999 899999999


Q ss_pred             eeecCCCCceeEEEecCCCCHHHHHHhhcc----------------------CCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 008656          356 GACTKPPSLCIVTEFMSGGSVYDYLHKLKG----------------------VFKLPSLLKVAIDVSKGMNYLHQNNIIH  413 (558)
Q Consensus       356 g~~~~~~~~~lV~E~~~ggsL~~~l~~~~~----------------------~l~~~~~~~i~~qI~~aL~yLH~~gIiH  413 (558)
                      +++...+..|+||||++||+|.+++.....                      .+++..++.++.||+.||.|||++||+|
T Consensus       116 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH  195 (344)
T 1rjb_A          116 GACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVH  195 (344)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEE
T ss_pred             EEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence            999999999999999999999999976433                      3788999999999999999999999999


Q ss_pred             ccCCCCcEEeCCCCcEEEEecCcceecccCCc---cccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCC
Q 008656          414 RDLKAANLLMDENEVVKVADFGVARVKAQSGV---MTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPY  489 (558)
Q Consensus       414 rDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf  489 (558)
                      |||||+|||++.++.+||+|||++........   .....||+.|+|||++.+..++.++||||||+++|+|++ |..||
T Consensus       196 ~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~  275 (344)
T 1rjb_A          196 RDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPY  275 (344)
T ss_dssp             TTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred             CCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCc
Confidence            99999999999999999999999976544322   223456889999999999999999999999999999998 99999


Q ss_pred             CCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHH
Q 008656          490 EYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKEVY  551 (558)
Q Consensus       490 ~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~~  551 (558)
                      ............+..+.++..+..+++.+.+||.+||..||.+||++.++++.|+.+.....
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~  337 (344)
T 1rjb_A          276 PGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAE  337 (344)
T ss_dssp             TTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred             ccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHH
Confidence            98877666777777788888889999999999999999999999999999999999887653


No 41 
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00  E-value=2.3e-46  Score=386.71  Aligned_cols=263  Identities=31%  Similarity=0.590  Sum_probs=229.6

Q ss_pred             ceeeCCCceeeeeeeeecCceEEEEEEECC-------ceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeee
Q 008656          286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCS-------QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGAC  358 (558)
Q Consensus       286 ~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~~-------~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~  358 (558)
                      .+++..++|++.+.||+|+||.||+|++.+       +.||||+++... .......+.+|+.++++++||||+++++++
T Consensus        41 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~  119 (343)
T 1luf_A           41 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDNPNIVKLLGVC  119 (343)
T ss_dssp             HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             eeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            457778899999999999999999999864       779999998653 455567899999999999999999999999


Q ss_pred             cCCCCceeEEEecCCCCHHHHHHhhc-----------------------cCCCHHHHHHHHHHHHHHHHHHHHCCceecc
Q 008656          359 TKPPSLCIVTEFMSGGSVYDYLHKLK-----------------------GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD  415 (558)
Q Consensus       359 ~~~~~~~lV~E~~~ggsL~~~l~~~~-----------------------~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrD  415 (558)
                      ...+..|+||||++|++|.+++....                       ..+++..++.++.||+.||.|||++||+|||
T Consensus       120 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~D  199 (343)
T 1luf_A          120 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRD  199 (343)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             ccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            99999999999999999999997642                       5689999999999999999999999999999


Q ss_pred             CCCCcEEeCCCCcEEEEecCcceecccC---CccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCC
Q 008656          416 LKAANLLMDENEVVKVADFGVARVKAQS---GVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEY  491 (558)
Q Consensus       416 LKp~NILl~~~~~vkL~DFG~a~~~~~~---~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~  491 (558)
                      |||+|||++.++.+||+|||+++.....   .......+|+.|+|||++.+..++.++||||||+++|+|++ |..||..
T Consensus       200 lkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~  279 (343)
T 1luf_A          200 LATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG  279 (343)
T ss_dssp             CSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred             CCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCC
Confidence            9999999999999999999999754332   12334567899999999999999999999999999999999 9999999


Q ss_pred             CCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHH
Q 008656          492 LTPLQAAVGVVQKGLRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKEV  550 (558)
Q Consensus       492 ~~~~~~~~~v~~~~~r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~  550 (558)
                      .+..+....+ ..+..+..+..+++.+.+||.+||..||.+||++.++++.|+++.+..
T Consensus       280 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~  337 (343)
T 1luf_A          280 MAHEEVIYYV-RDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA  337 (343)
T ss_dssp             SCHHHHHHHH-HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred             CChHHHHHHH-hCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence            8877665544 445556778899999999999999999999999999999999987654


No 42 
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00  E-value=1.1e-46  Score=407.19  Aligned_cols=267  Identities=34%  Similarity=0.654  Sum_probs=235.1

Q ss_pred             CCceeeCCCceeeeeeeeecCceEEEEEEEC-CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCC
Q 008656          284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYC-SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPP  362 (558)
Q Consensus       284 ~~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~-~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~  362 (558)
                      .+.|++..++|++.++||+|+||.||+|++. +..||||+++.....   .+.|.+|+.+|++++||||+++++++. ..
T Consensus       180 ~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~  255 (454)
T 1qcf_A          180 KDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS---VEAFLAEANVMKTLQHDKLVKLHAVVT-KE  255 (454)
T ss_dssp             TTCSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBC---HHHHHHHHHHHTTCCCTTBCCEEEEEC-SS
T ss_pred             ccceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCcc---HHHHHHHHHHHhhCCCCCEeeEEEEEe-CC
Confidence            4679999999999999999999999999986 678999999865432   568999999999999999999999987 56


Q ss_pred             CceeEEEecCCCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecc
Q 008656          363 SLCIVTEFMSGGSVYDYLHKLK-GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKA  441 (558)
Q Consensus       363 ~~~lV~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~  441 (558)
                      .+|+||||+.+|+|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...
T Consensus       256 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~  335 (454)
T 1qcf_A          256 PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIE  335 (454)
T ss_dssp             SCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBC
T ss_pred             ccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcC
Confidence            7899999999999999997543 368999999999999999999999999999999999999999999999999998654


Q ss_pred             cCC--ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHH
Q 008656          442 QSG--VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKL  518 (558)
Q Consensus       442 ~~~--~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l  518 (558)
                      ...  ......+|..|+|||++....++.++|||||||+||||++ |+.||.+.+..+.... +..+.+...|..+++.+
T Consensus       336 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~-i~~~~~~~~~~~~~~~l  414 (454)
T 1qcf_A          336 DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA-LERGYRMPRPENCPEEL  414 (454)
T ss_dssp             CHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH-HHHTCCCCCCTTSCHHH
T ss_pred             CCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHH-HHcCCCCCCCCCCCHHH
Confidence            322  1223456788999999999999999999999999999999 9999999988776654 44567778889999999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHhhcc
Q 008656          519 AELLERCWQQDPALRPDFSEIIEILQQIAKEVYSLYV  555 (558)
Q Consensus       519 ~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~~~~~~  555 (558)
                      .+||.+||..||.+|||+.+|++.|+++.....++|-
T Consensus       415 ~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~~~~~~  451 (454)
T 1qcf_A          415 YNIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQYE  451 (454)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSSCCSSB
T ss_pred             HHHHHHHccCChhHCcCHHHHHHHHHHHHhccccccc
Confidence            9999999999999999999999999998766655553


No 43 
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00  E-value=1.7e-45  Score=369.78  Aligned_cols=267  Identities=31%  Similarity=0.619  Sum_probs=231.5

Q ss_pred             CCceeeCCCceeeeeeeeecCceEEEEEEECC-ceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCC
Q 008656          284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYCS-QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPP  362 (558)
Q Consensus       284 ~~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~~-~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~  362 (558)
                      .+.|++..++|++.+.||+|+||.||+|.+.+ +.||+|+++.....   ...+.+|+.++++++||||+++++++.. +
T Consensus         5 ~~~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~   80 (279)
T 1qpc_A            5 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVVTQ-E   80 (279)
T ss_dssp             TCTTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSC---HHHHHHHHHHHHHCCCTTBCCEEEEECS-S
T ss_pred             hhhcccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCccc---HHHHHHHHHHHHhCCCcCcceEEEEEcC-C
Confidence            46899999999999999999999999999864 57999999865433   4678999999999999999999999874 4


Q ss_pred             CceeEEEecCCCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecc
Q 008656          363 SLCIVTEFMSGGSVYDYLHKLK-GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKA  441 (558)
Q Consensus       363 ~~~lV~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~  441 (558)
                      ..++||||++|++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+++...
T Consensus        81 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~  160 (279)
T 1qpc_A           81 PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE  160 (279)
T ss_dssp             SCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred             CcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCccccccc
Confidence            6899999999999999997543 268999999999999999999999999999999999999999999999999998765


Q ss_pred             cCCc--cccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHH
Q 008656          442 QSGV--MTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKL  518 (558)
Q Consensus       442 ~~~~--~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l  518 (558)
                      ....  .....++..|+|||++.+..++.++||||||+++|+|++ |..||...+..+.... +..+.+...+..+++.+
T Consensus       161 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l  239 (279)
T 1qpc_A          161 DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN-LERGYRMVRPDNCPEEL  239 (279)
T ss_dssp             SSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH-HHTTCCCCCCTTCCHHH
T ss_pred             CcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHH-HhcccCCCCcccccHHH
Confidence            4332  223456789999999999999999999999999999999 9999998887665544 44566677788999999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHhhcc
Q 008656          519 AELLERCWQQDPALRPDFSEIIEILQQIAKEVYSLYV  555 (558)
Q Consensus       519 ~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~~~~~~  555 (558)
                      .+++.+||..||.+||++.++++.|+++......+|-
T Consensus       240 ~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~~  276 (279)
T 1qpc_A          240 YQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQ  276 (279)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC-----
T ss_pred             HHHHHHHhccChhhCCCHHHHHHHHHHHHHhccCCCC
Confidence            9999999999999999999999999999988766553


No 44 
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00  E-value=2.5e-46  Score=385.54  Aligned_cols=263  Identities=29%  Similarity=0.468  Sum_probs=220.4

Q ss_pred             CCCCceeeCCCceeeeeeeeecCceEEEEEEECCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCC
Q 008656          282 DGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKP  361 (558)
Q Consensus       282 ~~~~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~  361 (558)
                      +++..|.++.++|++.++||+|+||.||+|++.++.||||+++..   ......+.+|+.++++++||||+++++++...
T Consensus        14 ~~~~n~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~   90 (322)
T 3soc_A           14 LGTENLYFQSMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQ---DKQSWQNEYEVYSLPGMKHENILQFIGAEKRG   90 (322)
T ss_dssp             CCCCCEEETTEEEEEEEEEECSTTCEEEEEEETTEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEE
T ss_pred             cCccccccchhhchhhheecccCceEEEEEEECCCEEEEEEeecC---chHHHHHHHHHHHHhcCCCCCchhhcceeccC
Confidence            456678899999999999999999999999999999999999754   23345566799999999999999999998765


Q ss_pred             CC----ceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC----------CceeccCCCCcEEeCCCC
Q 008656          362 PS----LCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQN----------NIIHRDLKAANLLMDENE  427 (558)
Q Consensus       362 ~~----~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~----------gIiHrDLKp~NILl~~~~  427 (558)
                      ..    +|+||||+++|+|.+++..  ..+++..++.++.||+.||.|||+.          ||+||||||+|||++.++
T Consensus        91 ~~~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~  168 (322)
T 3soc_A           91 TSVDVDLWLITAFHEKGSLSDFLKA--NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNL  168 (322)
T ss_dssp             CSSSEEEEEEEECCTTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTC
T ss_pred             CCCCceEEEEEecCCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCC
Confidence            43    6999999999999999975  5699999999999999999999999          999999999999999999


Q ss_pred             cEEEEecCcceecccCC---ccccCCCCCCccchhhhcC-----CCCCchHHHHHHHHHHHHHHcCCCCCCCCC------
Q 008656          428 VVKVADFGVARVKAQSG---VMTAETGTYRWMAPEVIEH-----KPYDHKADVFSFGIVLWELLTGKLPYEYLT------  493 (558)
Q Consensus       428 ~vkL~DFG~a~~~~~~~---~~~~~~gt~~y~APEv~~~-----~~~s~ksDVwSlGilL~elltG~~Pf~~~~------  493 (558)
                      .+||+|||+++......   ......||+.|+|||++.+     ..++.++|||||||++|||++|+.||.+..      
T Consensus       169 ~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~  248 (322)
T 3soc_A          169 TACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLP  248 (322)
T ss_dssp             CEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCT
T ss_pred             eEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccc
Confidence            99999999997654432   2334579999999999987     356678999999999999999999996432      


Q ss_pred             ----------HHHHHHHHHhcCCCCCCCCC-----CcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHH
Q 008656          494 ----------PLQAAVGVVQKGLRPTIPKN-----SQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKE  549 (558)
Q Consensus       494 ----------~~~~~~~v~~~~~r~~ip~~-----~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~  549 (558)
                                .......+.....++.++..     +++.+.+||.+||+.||.+|||+.++++.|+++.+.
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~  319 (322)
T 3soc_A          249 FEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL  319 (322)
T ss_dssp             THHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             hhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence                      22222333344444444432     346699999999999999999999999999998764


No 45 
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00  E-value=1.1e-45  Score=376.52  Aligned_cols=263  Identities=29%  Similarity=0.602  Sum_probs=231.4

Q ss_pred             CceeeCCCceeeeeeeeecCceEEEEEEEC-------CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEee
Q 008656          285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYC-------SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA  357 (558)
Q Consensus       285 ~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~-------~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~  357 (558)
                      ..|++..++|++.+.||+|+||.||++++.       ++.||||+++... .....+.+.+|+.++++++||||++++++
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~   94 (314)
T 2ivs_A           16 PKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA-SPSELRDLLSEFNVLKQVNHPHVIKLYGA   94 (314)
T ss_dssp             TTTBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred             cccccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCceeeEEEE
Confidence            467888999999999999999999999862       3679999998543 45556789999999999999999999999


Q ss_pred             ecCCCCceeEEEecCCCCHHHHHHhhc-----------------------cCCCHHHHHHHHHHHHHHHHHHHHCCceec
Q 008656          358 CTKPPSLCIVTEFMSGGSVYDYLHKLK-----------------------GVFKLPSLLKVAIDVSKGMNYLHQNNIIHR  414 (558)
Q Consensus       358 ~~~~~~~~lV~E~~~ggsL~~~l~~~~-----------------------~~l~~~~~~~i~~qI~~aL~yLH~~gIiHr  414 (558)
                      +...+..++||||++|++|.+++....                       ..+++..++.++.||+.||.|||++||+||
T Consensus        95 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~  174 (314)
T 2ivs_A           95 CSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHR  174 (314)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred             EecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCccc
Confidence            999999999999999999999997643                       238899999999999999999999999999


Q ss_pred             cCCCCcEEeCCCCcEEEEecCcceecccCC---ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCC
Q 008656          415 DLKAANLLMDENEVVKVADFGVARVKAQSG---VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYE  490 (558)
Q Consensus       415 DLKp~NILl~~~~~vkL~DFG~a~~~~~~~---~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~  490 (558)
                      ||||+|||++.++.+||+|||+++......   ......+|+.|+|||++.+..++.++||||||+++|+|++ |..||.
T Consensus       175 dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~  254 (314)
T 2ivs_A          175 DLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYP  254 (314)
T ss_dssp             CCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred             ccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            999999999999999999999998654432   2234457888999999999999999999999999999999 999999


Q ss_pred             CCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHH
Q 008656          491 YLTPLQAAVGVVQKGLRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKE  549 (558)
Q Consensus       491 ~~~~~~~~~~v~~~~~r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~  549 (558)
                      ........ ..+..+..+..+..+++.+.++|.+||..||.+||++.++++.|+++..+
T Consensus       255 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  312 (314)
T 2ivs_A          255 GIPPERLF-NLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK  312 (314)
T ss_dssp             TCCGGGHH-HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             CCCHHHHH-HHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence            88765544 34555667778889999999999999999999999999999999998764


No 46 
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00  E-value=5e-46  Score=392.33  Aligned_cols=263  Identities=32%  Similarity=0.600  Sum_probs=220.8

Q ss_pred             ceeeCCCceeeeeeeeecCceEEEEEEEC-----CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecC
Q 008656          286 VWEIDPKHLKFGSKVASGSYGDLYRGTYC-----SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTK  360 (558)
Q Consensus       286 ~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~-----~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~  360 (558)
                      ..+++..+|++.+.||+|+||.||+|++.     +..||||+++... .....+.|.+|+.++++++||||+++++++..
T Consensus        39 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~  117 (373)
T 2qol_A           39 AKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK  117 (373)
T ss_dssp             SCBCCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred             HhhcCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee
Confidence            34677789999999999999999999864     5679999998653 45556789999999999999999999999999


Q ss_pred             CCCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceec
Q 008656          361 PPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVK  440 (558)
Q Consensus       361 ~~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~  440 (558)
                      ....|+||||++|++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus       118 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  197 (373)
T 2qol_A          118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVL  197 (373)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred             CCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCcccccc
Confidence            99999999999999999999876678999999999999999999999999999999999999999999999999999865


Q ss_pred             ccCCc----cccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCc
Q 008656          441 AQSGV----MTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQ  515 (558)
Q Consensus       441 ~~~~~----~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~  515 (558)
                      .....    .....++..|+|||++.+..++.++||||||+++|||++ |..||...+..+.... +..+.+...+..++
T Consensus       198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~-i~~~~~~~~~~~~~  276 (373)
T 2qol_A          198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA-VDEGYRLPPPMDCP  276 (373)
T ss_dssp             ----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHH-HHTTEECCCCTTCB
T ss_pred             ccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HHcCCCCCCCcccc
Confidence            44321    122345778999999999999999999999999999998 9999998887665544 44566667788899


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHH
Q 008656          516 PKLAELLERCWQQDPALRPDFSEIIEILQQIAKEV  550 (558)
Q Consensus       516 ~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~  550 (558)
                      ..+.++|.+||+.||.+||++.++++.|+++.+..
T Consensus       277 ~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~  311 (373)
T 2qol_A          277 AALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP  311 (373)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred             HHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999997653


No 47 
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=7.1e-46  Score=388.14  Aligned_cols=250  Identities=24%  Similarity=0.433  Sum_probs=213.3

Q ss_pred             eeCCCceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCce
Q 008656          288 EIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLC  365 (558)
Q Consensus       288 ~i~~~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~  365 (558)
                      +.-.++|++.+.||+|+||.||+|++  +++.||||++....... ....+.+|+.+|++++||||+++++++...+.+|
T Consensus         6 ~~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~-~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~   84 (347)
T 3zgw_A            6 DELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGS-DLPRIKTEIEALKNLRHQHICQLYHVLETANKIF   84 (347)
T ss_dssp             TTTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             HHHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccch-HHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEE
Confidence            33457899999999999999999987  57889999998664433 2456889999999999999999999999999999


Q ss_pred             eEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccCC-
Q 008656          366 IVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSG-  444 (558)
Q Consensus       366 lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~-  444 (558)
                      +||||++|++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... 
T Consensus        85 lv~E~~~gg~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~  163 (347)
T 3zgw_A           85 MVLEYCPGGELFDYIIS-QDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKD  163 (347)
T ss_dssp             EEEECCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC------
T ss_pred             EEEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCC
Confidence            99999999999999976 5679999999999999999999999999999999999999999999999999987654332 


Q ss_pred             -ccccCCCCCCccchhhhcCCCC-CchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHH
Q 008656          445 -VMTAETGTYRWMAPEVIEHKPY-DHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELL  522 (558)
Q Consensus       445 -~~~~~~gt~~y~APEv~~~~~~-s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~~Ll  522 (558)
                       ......||+.|+|||++.+..+ +.++|||||||++|+|++|..||...+..+....+...  ...+|..+++++.+||
T Consensus       164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~li  241 (347)
T 3zgw_A          164 YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRG--KYDVPKWLSPSSILLL  241 (347)
T ss_dssp             --------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT--CCCCCTTCCHHHHHHH
T ss_pred             ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHH
Confidence             3445679999999999998886 89999999999999999999999998887777666554  3457788999999999


Q ss_pred             HHhhhcCCCCCCCHHHHHH
Q 008656          523 ERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       523 ~~cL~~dP~~RPs~~ell~  541 (558)
                      .+||+.||.+|||+.|+++
T Consensus       242 ~~~L~~dP~~Rps~~eil~  260 (347)
T 3zgw_A          242 QQMLQVDPKKRISMKNLLN  260 (347)
T ss_dssp             HHHTCSSGGGSCCHHHHHT
T ss_pred             HHHcccCHhHCcCHHHHhc
Confidence            9999999999999999985


No 48 
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00  E-value=1e-45  Score=377.05  Aligned_cols=246  Identities=27%  Similarity=0.506  Sum_probs=218.0

Q ss_pred             CceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeEEE
Q 008656          292 KHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTE  369 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV~E  369 (558)
                      ++|++.++||+|+||.||+|.+  .++.||||++.......  ...+.+|+.++++++||||+++++++..++.+|+|||
T Consensus        20 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   97 (297)
T 3fxz_A           20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   97 (297)
T ss_dssp             GTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSC--HHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccH--HHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence            5789999999999999999986  57889999987654332  4668899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccCC-cccc
Q 008656          370 FMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSG-VMTA  448 (558)
Q Consensus       370 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~-~~~~  448 (558)
                      |++|++|.+++..  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... ....
T Consensus        98 ~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  175 (297)
T 3fxz_A           98 YLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST  175 (297)
T ss_dssp             CCTTCBHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCC
T ss_pred             CCCCCCHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccCC
Confidence            9999999999975  468999999999999999999999999999999999999999999999999997655433 3445


Q ss_pred             CCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCC-CCCCCCCCcHHHHHHHHHhhh
Q 008656          449 ETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGL-RPTIPKNSQPKLAELLERCWQ  527 (558)
Q Consensus       449 ~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~-r~~ip~~~~~~l~~Ll~~cL~  527 (558)
                      ..||+.|+|||++.+..|+.++|||||||++|+|++|..||...++......+..... ....+..+++.+.+||.+||+
T Consensus       176 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  255 (297)
T 3fxz_A          176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLE  255 (297)
T ss_dssp             CCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHHHHSC
T ss_pred             ccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHHHHcc
Confidence            6799999999999999999999999999999999999999999888776665554433 334567889999999999999


Q ss_pred             cCCCCCCCHHHHHH
Q 008656          528 QDPALRPDFSEIIE  541 (558)
Q Consensus       528 ~dP~~RPs~~ell~  541 (558)
                      .||.+|||+.|+++
T Consensus       256 ~dp~~Rps~~ell~  269 (297)
T 3fxz_A          256 MDVEKRGSAKELLQ  269 (297)
T ss_dssp             SSTTTSCCHHHHTT
T ss_pred             CChhHCcCHHHHhh
Confidence            99999999999875


No 49 
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00  E-value=1.9e-45  Score=379.04  Aligned_cols=267  Identities=30%  Similarity=0.591  Sum_probs=235.8

Q ss_pred             CCceeeCCCceeeeeeeeecCceEEEEEEECC-------ceEEEEEecCCCCChHHHHHHHHHHHHHHhc-cCCCceEEE
Q 008656          284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYCS-------QDVAIKVLKPERINSDMQKEFAQEVFIMRKV-RHKNVVQFI  355 (558)
Q Consensus       284 ~~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~~-------~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l-~HpnIv~l~  355 (558)
                      ...|++..++|++.+.||+|+||.||+|++.+       ..||+|+++... .......+.+|+.+++++ +||||++++
T Consensus        38 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~  116 (333)
T 2i1m_A           38 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA-HADEKEALMSELKIMSHLGQHENIVNLL  116 (333)
T ss_dssp             CGGGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             cccccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc-ChHHHHHHHHHHHHHHhhcCCCCeeeEE
Confidence            35789999999999999999999999999843       369999998653 345567899999999999 899999999


Q ss_pred             eeecCCCCceeEEEecCCCCHHHHHHhhc-------------cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEE
Q 008656          356 GACTKPPSLCIVTEFMSGGSVYDYLHKLK-------------GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLL  422 (558)
Q Consensus       356 g~~~~~~~~~lV~E~~~ggsL~~~l~~~~-------------~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NIL  422 (558)
                      +++...+.+|+||||+++|+|.+++....             ..+++..++.++.||+.||.|||++||+||||||+|||
T Consensus       117 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl  196 (333)
T 2i1m_A          117 GACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVL  196 (333)
T ss_dssp             EEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCE
T ss_pred             EEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEE
Confidence            99999999999999999999999997542             35789999999999999999999999999999999999


Q ss_pred             eCCCCcEEEEecCcceecccCCc---cccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHH
Q 008656          423 MDENEVVKVADFGVARVKAQSGV---MTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAA  498 (558)
Q Consensus       423 l~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~  498 (558)
                      ++.++.+||+|||+++.......   .....||+.|+|||++.+..++.++||||||+++|+|++ |..||.........
T Consensus       197 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~  276 (333)
T 2i1m_A          197 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKF  276 (333)
T ss_dssp             EEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHH
T ss_pred             ECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHH
Confidence            99999999999999976543321   223456789999999999999999999999999999999 99999988766666


Q ss_pred             HHHHhcCCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHH
Q 008656          499 VGVVQKGLRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKEVY  551 (558)
Q Consensus       499 ~~v~~~~~r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~~  551 (558)
                      ...+..+.++..+..+++.+.++|.+||+.||.+||++.++++.|+++.++..
T Consensus       277 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~  329 (333)
T 2i1m_A          277 YKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDR  329 (333)
T ss_dssp             HHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhhh
Confidence            67777777778888899999999999999999999999999999999987654


No 50 
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00  E-value=6.7e-46  Score=386.58  Aligned_cols=250  Identities=24%  Similarity=0.451  Sum_probs=221.2

Q ss_pred             eCCCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCC-ChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCce
Q 008656          289 IDPKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERI-NSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLC  365 (558)
Q Consensus       289 i~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~-~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~  365 (558)
                      +..++|++.+.||+|+||.||+++..  ++.||||+++.... .......+.+|+.+|+.++||||+++++++.....+|
T Consensus         2 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   81 (337)
T 1o6l_A            2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLC   81 (337)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEE
T ss_pred             CChHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEE
Confidence            34578999999999999999999984  78899999975421 1223467889999999999999999999999999999


Q ss_pred             eEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceeccc-CC
Q 008656          366 IVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ-SG  444 (558)
Q Consensus       366 lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~-~~  444 (558)
                      +||||++||+|.+++.+ .+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.... ..
T Consensus        82 lv~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~  160 (337)
T 1o6l_A           82 FVMEYANGGELFFHLSR-ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA  160 (337)
T ss_dssp             EEEECCTTCBHHHHHHH-HSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred             EEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCC
Confidence            99999999999999976 56799999999999999999999999999999999999999999999999999986433 33


Q ss_pred             ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHH
Q 008656          445 VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELLER  524 (558)
Q Consensus       445 ~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~~Ll~~  524 (558)
                      ......||+.|+|||++.+..|+.++|||||||++|||++|..||...+..+....+....  ..+|..+++++.+||.+
T Consensus       161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~--~~~p~~~s~~~~~li~~  238 (337)
T 1o6l_A          161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE--IRFPRTLSPEAKSLLAG  238 (337)
T ss_dssp             CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--CCCCTTSCHHHHHHHHH
T ss_pred             cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCC--CCCCCCCCHHHHHHHHH
Confidence            4556689999999999999999999999999999999999999999888777766665543  45778899999999999


Q ss_pred             hhhcCCCCCC-----CHHHHHH
Q 008656          525 CWQQDPALRP-----DFSEIIE  541 (558)
Q Consensus       525 cL~~dP~~RP-----s~~ell~  541 (558)
                      ||+.||.+||     ++.++++
T Consensus       239 lL~~dP~~R~g~~~~~~~ei~~  260 (337)
T 1o6l_A          239 LLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             HTCSSTTTSTTCSTTTHHHHHT
T ss_pred             HhhcCHHHhcCCCCCCHHHHHc
Confidence            9999999999     8999875


No 51 
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00  E-value=3.4e-45  Score=378.37  Aligned_cols=272  Identities=31%  Similarity=0.623  Sum_probs=233.0

Q ss_pred             CCceeeCCCceeeeeeeeecCceEEEEEEEC---------CceEEEEEecCCCCChHHHHHHHHHHHHHHhc-cCCCceE
Q 008656          284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYC---------SQDVAIKVLKPERINSDMQKEFAQEVFIMRKV-RHKNVVQ  353 (558)
Q Consensus       284 ~~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~---------~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l-~HpnIv~  353 (558)
                      ...|++..++|++.+.||+|+||.||+|++.         ++.||||+++... .......+.+|+.+++++ +||||++
T Consensus        27 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~  105 (334)
T 2pvf_A           27 DPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIIN  105 (334)
T ss_dssp             CTTTBCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC-CHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CccccCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC-cHHHHHHHHHHHHHHHHhhcCCCEee
Confidence            3568899999999999999999999999874         4569999998653 445567899999999999 8999999


Q ss_pred             EEeeecCCCCceeEEEecCCCCHHHHHHhhc---------------cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCC
Q 008656          354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLK---------------GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKA  418 (558)
Q Consensus       354 l~g~~~~~~~~~lV~E~~~ggsL~~~l~~~~---------------~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp  418 (558)
                      +++++...+.+|+||||++|++|.+++....               ..+++..++.++.||+.||.|||++||+||||||
T Consensus       106 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp  185 (334)
T 2pvf_A          106 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA  185 (334)
T ss_dssp             EEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSG
T ss_pred             EEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCcc
Confidence            9999999999999999999999999997643               2488999999999999999999999999999999


Q ss_pred             CcEEeCCCCcEEEEecCcceecccCC---ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCH
Q 008656          419 ANLLMDENEVVKVADFGVARVKAQSG---VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTP  494 (558)
Q Consensus       419 ~NILl~~~~~vkL~DFG~a~~~~~~~---~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~  494 (558)
                      +|||++.++.+||+|||+++......   ......+|+.|+|||++.+..++.++||||||+++|+|++ |..||.+.+.
T Consensus       186 ~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~  265 (334)
T 2pvf_A          186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV  265 (334)
T ss_dssp             GGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred             ceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH
Confidence            99999999999999999998655432   2234467889999999999999999999999999999999 9999998876


Q ss_pred             HHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHH-HhhcccC
Q 008656          495 LQAAVGVVQKGLRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKEV-YSLYVSL  557 (558)
Q Consensus       495 ~~~~~~v~~~~~r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~-~~~~~~~  557 (558)
                      .+... .+..+.++..+..+++.+.++|.+||..||.+||++.++++.|+++.... ...|+++
T Consensus       266 ~~~~~-~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~~~~~~~  328 (334)
T 2pvf_A          266 EELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLDL  328 (334)
T ss_dssp             HHHHH-HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-------
T ss_pred             HHHHH-HHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccccCcccCC
Confidence            65544 44556677788899999999999999999999999999999999998766 3555443


No 52 
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.4e-45  Score=370.87  Aligned_cols=266  Identities=28%  Similarity=0.541  Sum_probs=233.4

Q ss_pred             ceeeCCCceeeee-eeeecCceEEEEEEE----CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecC
Q 008656          286 VWEIDPKHLKFGS-KVASGSYGDLYRGTY----CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTK  360 (558)
Q Consensus       286 ~~~i~~~~~~i~~-~LG~GsfG~Vy~g~~----~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~  360 (558)
                      .|.+..++|.+.+ .||+|+||.||+|++    .+..||||+++... .......+.+|+.++++++||||+++++++. 
T Consensus         3 ~~~~~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-   80 (287)
T 1u59_A            3 KLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-   80 (287)
T ss_dssp             CCBCCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-
T ss_pred             cccccHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc-chhHHHHHHHHHHHHHhCCCCCEeEEEEEec-
Confidence            4677788898887 999999999999986    46679999998653 4455678999999999999999999999994 


Q ss_pred             CCCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceec
Q 008656          361 PPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVK  440 (558)
Q Consensus       361 ~~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~  440 (558)
                      .+..++||||+++++|.+++......+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+++..
T Consensus        81 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~  160 (287)
T 1u59_A           81 AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL  160 (287)
T ss_dssp             SSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred             CCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeee
Confidence            45689999999999999999876677999999999999999999999999999999999999999999999999999866


Q ss_pred             ccCCc----cccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCc
Q 008656          441 AQSGV----MTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQ  515 (558)
Q Consensus       441 ~~~~~----~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~  515 (558)
                      .....    .....+|+.|+|||++.+..++.++||||||+++|+|++ |..||...+..+.... +..+.++.++..++
T Consensus       161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~-i~~~~~~~~~~~~~  239 (287)
T 1u59_A          161 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAF-IEQGKRMECPPECP  239 (287)
T ss_dssp             TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHH-HHTTCCCCCCTTCC
T ss_pred             ccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHH-HhcCCcCCCCCCcC
Confidence            44322    223456889999999998999999999999999999998 9999998877665443 45566778889999


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHhhc
Q 008656          516 PKLAELLERCWQQDPALRPDFSEIIEILQQIAKEVYSLY  554 (558)
Q Consensus       516 ~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~~~~~  554 (558)
                      +.+.++|.+||..||.+||++.++++.|+++..+...++
T Consensus       240 ~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~  278 (287)
T 1u59_A          240 PELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKV  278 (287)
T ss_dssp             HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCcc
Confidence            999999999999999999999999999999998876554


No 53 
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00  E-value=5.7e-46  Score=401.61  Aligned_cols=267  Identities=36%  Similarity=0.652  Sum_probs=230.4

Q ss_pred             CCceeeCCCceeeeeeeeecCceEEEEEEECC-ceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCC
Q 008656          284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYCS-QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPP  362 (558)
Q Consensus       284 ~~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~~-~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~  362 (558)
                      .+.|++..++|++.++||+|+||.||+|++.+ ..||||+++.....   .+.|.+|+.+|++++||||+++++++.. .
T Consensus       176 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~  251 (452)
T 1fmk_A          176 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSE-E  251 (452)
T ss_dssp             TTCSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSC---HHHHHHHHHHHHHCCCTTBCCEEEEECS-S
T ss_pred             ccccccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCC---HHHHHHHHHHHHhCCCCCEeeEEEEEcC-C
Confidence            46799999999999999999999999999975 56999999875433   3578999999999999999999999876 6


Q ss_pred             CceeEEEecCCCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecc
Q 008656          363 SLCIVTEFMSGGSVYDYLHKLK-GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKA  441 (558)
Q Consensus       363 ~~~lV~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~  441 (558)
                      ..|+||||+++|+|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...
T Consensus       252 ~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~  331 (452)
T 1fmk_A          252 PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE  331 (452)
T ss_dssp             SCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC---
T ss_pred             ceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecC
Confidence            7899999999999999997543 458999999999999999999999999999999999999999999999999998654


Q ss_pred             cCC--ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHH
Q 008656          442 QSG--VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKL  518 (558)
Q Consensus       442 ~~~--~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l  518 (558)
                      ...  ......++..|+|||++.+..++.++||||||+++|||++ |..||.+.+..+.... +..+.++..|..+++.+
T Consensus       332 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~-i~~~~~~~~~~~~~~~l  410 (452)
T 1fmk_A          332 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESL  410 (452)
T ss_dssp             -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH-HHTTCCCCCCTTSCHHH
T ss_pred             CCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHH-HHcCCCCCCCCCCCHHH
Confidence            332  1223456789999999999999999999999999999999 9999999888776554 45677788889999999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHhhcc
Q 008656          519 AELLERCWQQDPALRPDFSEIIEILQQIAKEVYSLYV  555 (558)
Q Consensus       519 ~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~~~~~~  555 (558)
                      .+||.+||..||.+|||+.++++.|+++......+|-
T Consensus       411 ~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~~~~  447 (452)
T 1fmk_A          411 HDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQ  447 (452)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCCCCC
T ss_pred             HHHHHHHccCChhhCcCHHHHHHHHHHHhccCCcccc
Confidence            9999999999999999999999999988766655553


No 54 
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00  E-value=4.8e-46  Score=401.00  Aligned_cols=303  Identities=23%  Similarity=0.390  Sum_probs=228.7

Q ss_pred             CCChhhHHHHHHHHHHHHHHHhhcCCCCCC--CCCCCCCCCCCCCCCCCCccccCCCCCCceeeCCCceeeeeeeeecCc
Q 008656          228 GWPYEETEQLRAALEKEVLKLERQGWPSHR--SSSPTSEPEDTGMKSHPYHLKIPNDGTDVWEIDPKHLKFGSKVASGSY  305 (558)
Q Consensus       228 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~--sss~~~~~~~~~~~~~~~~~~~p~~~~~~~~i~~~~~~i~~~LG~Gsf  305 (558)
                      .-..++.++|..++...+...+.+......  +.++........   ...     ......+.+..++|++.++||+|+|
T Consensus        90 ~~~~ee~e~W~~ai~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----~~~~~~~~~~~~~y~~~~~lG~G~~  161 (446)
T 4ejn_A           90 VETPEEREEWTTAIQTVADGLKKQAAAEMDFRSGSPSDNSGAEE---MEV-----SLAKPKHRVTMNEFEYLKLLGKGTF  161 (446)
T ss_dssp             CSSHHHHHHHHHHHHHHCCC------------------------------------------CCCGGGEEEEEEEEEETT
T ss_pred             cCCHHHHHHHHHHHHhhhhhhhcccccccccCCCCCcccccccc---ccc-----cccCcccCCChHHcEEeEEEeeCcC
Confidence            456788999999999876554443321111  111111000000   000     0111234566678999999999999


Q ss_pred             eEEEEEEE--CCceEEEEEecCCCC-ChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeEEEecCCCCHHHHHHh
Q 008656          306 GDLYRGTY--CSQDVAIKVLKPERI-NSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHK  382 (558)
Q Consensus       306 G~Vy~g~~--~~~~VAIKvlk~~~~-~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~ggsL~~~l~~  382 (558)
                      |.||++..  +++.||||+++.... .......+.+|+.+++.++||||+++++++...+.+|+||||++|++|.+++..
T Consensus       162 g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~  241 (446)
T 4ejn_A          162 GKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR  241 (446)
T ss_dssp             EEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCSSCBHHHHHHH
T ss_pred             EEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCCCcHHHHHHh
Confidence            99999997  477899999985432 233456788899999999999999999999999999999999999999999976


Q ss_pred             hccCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCcEEeCCCCcEEEEecCcceeccc-CCccccCCCCCCccchhh
Q 008656          383 LKGVFKLPSLLKVAIDVSKGMNYLHQ-NNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ-SGVMTAETGTYRWMAPEV  460 (558)
Q Consensus       383 ~~~~l~~~~~~~i~~qI~~aL~yLH~-~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~-~~~~~~~~gt~~y~APEv  460 (558)
                       .+.+++..++.++.||+.||+|||+ +||+||||||+|||++.++.+||+|||+++.... ........||+.|+|||+
T Consensus       242 -~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~  320 (446)
T 4ejn_A          242 -ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEV  320 (446)
T ss_dssp             -HSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----CCSSSCGGGCCHHH
T ss_pred             -cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCCcccccccCCccccCHhh
Confidence             5679999999999999999999998 9999999999999999999999999999976433 234556789999999999


Q ss_pred             hcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhhhcCCCCCC-----C
Q 008656          461 IEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELLERCWQQDPALRP-----D  535 (558)
Q Consensus       461 ~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~~Ll~~cL~~dP~~RP-----s  535 (558)
                      +.+..|+.++|||||||++|||++|+.||...+..+....+....  ..+|..+++++.+||.+||+.||.+||     +
T Consensus       321 ~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~--~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t  398 (446)
T 4ejn_A          321 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE--IRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSED  398 (446)
T ss_dssp             HHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTT
T ss_pred             cCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCC--CCCCccCCHHHHHHHHHHcccCHHHhCCCCCCC
Confidence            999999999999999999999999999999988877776666544  457788999999999999999999999     9


Q ss_pred             HHHHHH
Q 008656          536 FSEIIE  541 (558)
Q Consensus       536 ~~ell~  541 (558)
                      +.|+++
T Consensus       399 ~~ell~  404 (446)
T 4ejn_A          399 AKEIMQ  404 (446)
T ss_dssp             HHHHHT
T ss_pred             HHHHHh
Confidence            999875


No 55 
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00  E-value=1.9e-45  Score=372.39  Aligned_cols=264  Identities=29%  Similarity=0.549  Sum_probs=227.1

Q ss_pred             CceeeCCCceeeee-eeeecCceEEEEEEEC----CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeec
Q 008656          285 DVWEIDPKHLKFGS-KVASGSYGDLYRGTYC----SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACT  359 (558)
Q Consensus       285 ~~~~i~~~~~~i~~-~LG~GsfG~Vy~g~~~----~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~  359 (558)
                      ..+.++.++|++.+ .||+|+||.||+|.+.    ++.||||+++.........+.+.+|+.+++.++||||+++++++ 
T Consensus         9 ~~~~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-   87 (291)
T 1xbb_A            9 KEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-   87 (291)
T ss_dssp             --CBCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-
T ss_pred             ceeeecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-
Confidence            45577888999998 9999999999999763    46799999987655556678899999999999999999999999 


Q ss_pred             CCCCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCccee
Q 008656          360 KPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV  439 (558)
Q Consensus       360 ~~~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~  439 (558)
                      ..+..++||||+++++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+++.
T Consensus        88 ~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~  166 (291)
T 1xbb_A           88 EAESWMLVMEMAELGPLNKYLQQ-NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKA  166 (291)
T ss_dssp             ESSSEEEEEECCTTEEHHHHHHH-CTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred             CCCCcEEEEEeCCCCCHHHHHHh-CcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCccee
Confidence            45678999999999999999976 56699999999999999999999999999999999999999999999999999986


Q ss_pred             cccCCc----cccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCC
Q 008656          440 KAQSGV----MTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQKGLRPTIPKNS  514 (558)
Q Consensus       440 ~~~~~~----~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~  514 (558)
                      ......    .....+++.|+|||++.+..++.++||||||+++|+|++ |..||...+..+... .+..+.++..+..+
T Consensus       167 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~  245 (291)
T 1xbb_A          167 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA-MLEKGERMGCPAGC  245 (291)
T ss_dssp             CCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHH-HHHTTCCCCCCTTC
T ss_pred             eccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHH-HHHcCCCCCCCCCC
Confidence            544322    223456788999999999999999999999999999999 999999988766544 34556677788899


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHH
Q 008656          515 QPKLAELLERCWQQDPALRPDFSEIIEILQQIAKEVY  551 (558)
Q Consensus       515 ~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~~  551 (558)
                      ++.+.++|.+||+.||.+||++.++++.|+++...+.
T Consensus       246 ~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~  282 (291)
T 1xbb_A          246 PREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV  282 (291)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999988764


No 56 
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=5.4e-45  Score=377.58  Aligned_cols=264  Identities=33%  Similarity=0.618  Sum_probs=226.6

Q ss_pred             ceeeCCCceeeeeeeeecCceEEEEEEECC------ceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeec
Q 008656          286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCS------QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACT  359 (558)
Q Consensus       286 ~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~~------~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~  359 (558)
                      .+++..++|++.+.||+|+||.||+|.+..      ..||||+++... .......+.+|+.++++++||||+++++++.
T Consensus        38 ~~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~  116 (333)
T 1mqb_A           38 TTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-TEKQRVDFLGEAGIMGQFSHHNIIRLEGVIS  116 (333)
T ss_dssp             CCBCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             cccCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEe
Confidence            347888999999999999999999998743      249999998653 4455678999999999999999999999999


Q ss_pred             CCCCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCccee
Q 008656          360 KPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV  439 (558)
Q Consensus       360 ~~~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~  439 (558)
                      ..+..++||||++|++|.+++....+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus       117 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~  196 (333)
T 1mqb_A          117 KYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRV  196 (333)
T ss_dssp             SSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred             cCCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchh
Confidence            99999999999999999999987667899999999999999999999999999999999999999999999999999976


Q ss_pred             cccCC----ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCC
Q 008656          440 KAQSG----VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQKGLRPTIPKNS  514 (558)
Q Consensus       440 ~~~~~----~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~  514 (558)
                      .....    ......+|+.|+|||++.+..++.++||||||+++|+|++ |..||...+..+.... +..+.++..+..+
T Consensus       197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~  275 (333)
T 1mqb_A          197 LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKA-INDGFRLPTPMDC  275 (333)
T ss_dssp             --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH-HHTTCCCCCCTTC
T ss_pred             hccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHH-HHCCCcCCCcccC
Confidence            54332    1223356789999999999999999999999999999999 9999998887665544 4455667778899


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHH
Q 008656          515 QPKLAELLERCWQQDPALRPDFSEIIEILQQIAKEVY  551 (558)
Q Consensus       515 ~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~~  551 (558)
                      ++.+.++|.+||+.||.+||++.++++.|+++.+...
T Consensus       276 ~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~  312 (333)
T 1mqb_A          276 PSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD  312 (333)
T ss_dssp             BHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence            9999999999999999999999999999999886543


No 57 
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00  E-value=3.1e-45  Score=368.60  Aligned_cols=264  Identities=29%  Similarity=0.576  Sum_probs=226.9

Q ss_pred             CceeeCCCceeeeeeeeecCceEEEEEEECC-----ceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeec
Q 008656          285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCS-----QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACT  359 (558)
Q Consensus       285 ~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~~-----~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~  359 (558)
                      ..|.+..++|++.+.||+|+||.||+|++.+     ..||+|+++... .....+.+.+|+.++++++||||+++++++.
T Consensus         5 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~   83 (281)
T 3cc6_A            5 PQYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIE   83 (281)
T ss_dssp             CCCSCCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS-CHHHHHHHHHHHHHHHHHCCTTBCCEEEEEC
T ss_pred             ccceecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc-CchHHHHHHHHHHHHHhCCCCCcceEEEEEc
Confidence            4567888999999999999999999998743     249999988653 3455678999999999999999999999987


Q ss_pred             CCCCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCccee
Q 008656          360 KPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV  439 (558)
Q Consensus       360 ~~~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~  439 (558)
                      .+ ..|+||||+++++|.+++......+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++..
T Consensus        84 ~~-~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~  162 (281)
T 3cc6_A           84 EE-PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRY  162 (281)
T ss_dssp             SS-SCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred             CC-CCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCcc
Confidence            54 57899999999999999987667799999999999999999999999999999999999999999999999999976


Q ss_pred             cccCC--ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcH
Q 008656          440 KAQSG--VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQP  516 (558)
Q Consensus       440 ~~~~~--~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~  516 (558)
                      .....  ......+|+.|+|||++.+..++.++||||||+++|+|++ |+.||......+... .+..+.+...+..+++
T Consensus       163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~  241 (281)
T 3cc6_A          163 IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIG-VLEKGDRLPKPDLCPP  241 (281)
T ss_dssp             C---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHH-HHHHTCCCCCCTTCCH
T ss_pred             cccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHH-HHhcCCCCCCCCCCCH
Confidence            54432  2234457889999999999999999999999999999998 999998776655443 3444556677888999


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHH
Q 008656          517 KLAELLERCWQQDPALRPDFSEIIEILQQIAKEVY  551 (558)
Q Consensus       517 ~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~~  551 (558)
                      .+.++|.+||..||.+||++.++++.|+++.+...
T Consensus       242 ~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~  276 (281)
T 3cc6_A          242 VLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEK  276 (281)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhhh
Confidence            99999999999999999999999999999986543


No 58 
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00  E-value=1.4e-45  Score=387.68  Aligned_cols=263  Identities=30%  Similarity=0.555  Sum_probs=228.5

Q ss_pred             ceeeCCCceeeeeeeeecCceEEEEEEEC-------CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeee
Q 008656          286 VWEIDPKHLKFGSKVASGSYGDLYRGTYC-------SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGAC  358 (558)
Q Consensus       286 ~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~-------~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~  358 (558)
                      .+++..++|++.++||+|+||.||+|++.       ++.||||+++.. ........+.+|+.++++++||||+++++++
T Consensus        65 ~~~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~  143 (367)
T 3l9p_A           65 LKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV-CSEQDELDFLMEALIISKFNHQNIVRCIGVS  143 (367)
T ss_dssp             SCBCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hhhcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccc-cChhhHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            45677789999999999999999999853       457999999754 3445566799999999999999999999999


Q ss_pred             cCCCCceeEEEecCCCCHHHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCC---cE
Q 008656          359 TKPPSLCIVTEFMSGGSVYDYLHKLK------GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENE---VV  429 (558)
Q Consensus       359 ~~~~~~~lV~E~~~ggsL~~~l~~~~------~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~---~v  429 (558)
                      ......|+||||++||+|.+++....      ..+++..++.++.||+.||.|||++||+||||||+|||++.++   .+
T Consensus       144 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~  223 (367)
T 3l9p_A          144 LQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA  223 (367)
T ss_dssp             CSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCE
T ss_pred             ecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceE
Confidence            99999999999999999999997643      3588999999999999999999999999999999999999555   59


Q ss_pred             EEEecCcceecccC---CccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcC
Q 008656          430 KVADFGVARVKAQS---GVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQKG  505 (558)
Q Consensus       430 kL~DFG~a~~~~~~---~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~~v~~~~  505 (558)
                      ||+|||+++.....   .......||+.|+|||++.+..++.++|||||||++|||++ |..||...+..+.... +..+
T Consensus       224 kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~-i~~~  302 (367)
T 3l9p_A          224 KIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF-VTSG  302 (367)
T ss_dssp             EECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH-HHTT
T ss_pred             EECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HHcC
Confidence            99999999754322   22334567899999999999999999999999999999998 9999999887665544 4455


Q ss_pred             CCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHH
Q 008656          506 LRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKEV  550 (558)
Q Consensus       506 ~r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~  550 (558)
                      .++..+..+++.+.+||.+||+.||.+||++.++++.|+.+.+..
T Consensus       303 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~  347 (367)
T 3l9p_A          303 GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP  347 (367)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred             CCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence            667788899999999999999999999999999999999987654


No 59 
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00  E-value=2.3e-45  Score=386.16  Aligned_cols=249  Identities=22%  Similarity=0.391  Sum_probs=220.4

Q ss_pred             CceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCCh----HHHHHHHHHHHHHHhccCCCceEEEeeecCCCCce
Q 008656          292 KHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINS----DMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLC  365 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~----~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~  365 (558)
                      +.|++++.||+|+||.||+++..  ++.||+|+++......    .....+.+|+.+|++++||||+++++++.....+|
T Consensus        12 ~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~   91 (361)
T 2yab_A           12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVV   91 (361)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             hceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEE
Confidence            57999999999999999999985  7889999998654322    13467899999999999999999999999999999


Q ss_pred             eEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCC----cEEEEecCcceecc
Q 008656          366 IVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENE----VVKVADFGVARVKA  441 (558)
Q Consensus       366 lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~----~vkL~DFG~a~~~~  441 (558)
                      +||||++||+|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++    .+||+|||+++...
T Consensus        92 lv~e~~~gg~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~  170 (361)
T 2yab_A           92 LILELVSGGELFDFLAQ-KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE  170 (361)
T ss_dssp             EEEECCCSCBHHHHHTT-CSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECC
T ss_pred             EEEEcCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcC
Confidence            99999999999999976 56799999999999999999999999999999999999998777    79999999998776


Q ss_pred             cCCccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCC--CCCCCCcHHHH
Q 008656          442 QSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRP--TIPKNSQPKLA  519 (558)
Q Consensus       442 ~~~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~--~ip~~~~~~l~  519 (558)
                      .........||+.|+|||++.+..|+.++|||||||++|+|++|..||.+.+..+....+.......  ..+..+++.+.
T Consensus       171 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~  250 (361)
T 2yab_A          171 DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAK  250 (361)
T ss_dssp             TTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHH
T ss_pred             CCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccCCCHHHH
Confidence            6555667789999999999999999999999999999999999999999988877766655433221  22357889999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHH
Q 008656          520 ELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       520 ~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                      +||.+||..||.+|||+.|+++
T Consensus       251 ~li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          251 DFIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHHCCCChhHCcCHHHHhc
Confidence            9999999999999999999974


No 60 
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00  E-value=2.7e-45  Score=385.27  Aligned_cols=249  Identities=21%  Similarity=0.405  Sum_probs=221.7

Q ss_pred             CceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeEEE
Q 008656          292 KHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTE  369 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV~E  369 (558)
                      ++|++.+.||+|+||.||++.+.  ++.||+|+++...........+.+|+.++++++||||+++++++...+..|+|||
T Consensus        29 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e  108 (362)
T 2bdw_A           29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD  108 (362)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             cCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence            57999999999999999999984  7889999998777666667889999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCC---cEEEEecCcceecccCCcc
Q 008656          370 FMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENE---VVKVADFGVARVKAQSGVM  446 (558)
Q Consensus       370 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~---~vkL~DFG~a~~~~~~~~~  446 (558)
                      |+.|++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++   .+||+|||++.........
T Consensus       109 ~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~~  187 (362)
T 2bdw_A          109 LVTGGELFEDIVA-REFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW  187 (362)
T ss_dssp             CCCSCBHHHHHTT-CSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCSC
T ss_pred             cCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCccc
Confidence            9999999999976 56789999999999999999999999999999999999998654   5999999999877665555


Q ss_pred             ccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCC--CCCcHHHHHHHHH
Q 008656          447 TAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIP--KNSQPKLAELLER  524 (558)
Q Consensus       447 ~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip--~~~~~~l~~Ll~~  524 (558)
                      ....||+.|+|||++.+..|+.++|||||||++|+|++|..||...+.......+.........+  ..+++++.+||.+
T Consensus       188 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  267 (362)
T 2bdw_A          188 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDS  267 (362)
T ss_dssp             CCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCHHHHHHHHH
T ss_pred             ccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHH
Confidence            66789999999999999999999999999999999999999999888777666655544332222  4678999999999


Q ss_pred             hhhcCCCCCCCHHHHHH
Q 008656          525 CWQQDPALRPDFSEIIE  541 (558)
Q Consensus       525 cL~~dP~~RPs~~ell~  541 (558)
                      ||..||.+||++.++++
T Consensus       268 ~L~~dP~~R~t~~e~l~  284 (362)
T 2bdw_A          268 MLTVNPKKRITADQALK  284 (362)
T ss_dssp             HSCSSGGGSCCHHHHTT
T ss_pred             HcCCChhhCcCHHHHhc
Confidence            99999999999999874


No 61 
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00  E-value=1.7e-45  Score=375.46  Aligned_cols=265  Identities=32%  Similarity=0.623  Sum_probs=231.3

Q ss_pred             CceeeCCCceeeeeeeeecCceEEEEEEEC-------CceEEEEEecCCCCChHHHHHHHHHHHHHHhc-cCCCceEEEe
Q 008656          285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYC-------SQDVAIKVLKPERINSDMQKEFAQEVFIMRKV-RHKNVVQFIG  356 (558)
Q Consensus       285 ~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~-------~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l-~HpnIv~l~g  356 (558)
                      ..|++..++|++.+.||+|+||.||+|.+.       ++.||||+++... .......+.+|+.+++++ +||||+++++
T Consensus        20 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~   98 (316)
T 2xir_A           20 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLG   98 (316)
T ss_dssp             HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             cceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC-CcHHHHHHHHHHHHHHhcccCCCeeeEEE
Confidence            467888899999999999999999999853       3679999998653 344557899999999999 6899999999


Q ss_pred             eecCCC-CceeEEEecCCCCHHHHHHhhccC---------------CCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCc
Q 008656          357 ACTKPP-SLCIVTEFMSGGSVYDYLHKLKGV---------------FKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAAN  420 (558)
Q Consensus       357 ~~~~~~-~~~lV~E~~~ggsL~~~l~~~~~~---------------l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~N  420 (558)
                      ++...+ .+++||||++|++|.+++......               +++..++.++.||+.||.|||++||+||||||+|
T Consensus        99 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~N  178 (316)
T 2xir_A           99 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARN  178 (316)
T ss_dssp             EECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             EEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccce
Confidence            987654 589999999999999999764332               7899999999999999999999999999999999


Q ss_pred             EEeCCCCcEEEEecCcceecccCCc---cccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHH
Q 008656          421 LLMDENEVVKVADFGVARVKAQSGV---MTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQ  496 (558)
Q Consensus       421 ILl~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~  496 (558)
                      |+++.++.+||+|||+++.......   .....||+.|+|||++.+..++.++||||||+++|+|++ |..||.......
T Consensus       179 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~  258 (316)
T 2xir_A          179 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE  258 (316)
T ss_dssp             EEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH
T ss_pred             EEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhH
Confidence            9999999999999999976543321   223457889999999999999999999999999999998 999998877666


Q ss_pred             HHHHHHhcCCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHH
Q 008656          497 AAVGVVQKGLRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKEV  550 (558)
Q Consensus       497 ~~~~v~~~~~r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~  550 (558)
                      .....+..+.+...+..+++.+.++|.+||+.||.+||++.++++.|+++++.-
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  312 (316)
T 2xir_A          259 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN  312 (316)
T ss_dssp             HHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence            666666667777888899999999999999999999999999999999998754


No 62 
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00  E-value=1.6e-45  Score=378.00  Aligned_cols=264  Identities=28%  Similarity=0.516  Sum_probs=213.3

Q ss_pred             ceeeCCCceeeeeeeeecCceEEEEEEECCc-----eEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecC
Q 008656          286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-----DVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTK  360 (558)
Q Consensus       286 ~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~~~-----~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~  360 (558)
                      .+.+..++|++.+.||+|+||.||+|++...     .||||+++.........+.+.+|+.++++++||||+++++++..
T Consensus        17 ~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   96 (323)
T 3qup_A           17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLR   96 (323)
T ss_dssp             TTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEEC
T ss_pred             hcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeec
Confidence            4567788999999999999999999987532     69999998776566667889999999999999999999999877


Q ss_pred             CCCc------eeEEEecCCCCHHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcE
Q 008656          361 PPSL------CIVTEFMSGGSVYDYLHKLKG-----VFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVV  429 (558)
Q Consensus       361 ~~~~------~lV~E~~~ggsL~~~l~~~~~-----~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~v  429 (558)
                      ....      ++||||+.+++|.+++.....     .+++..++.++.||+.||.|||++||+||||||+|||++.++.+
T Consensus        97 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~  176 (323)
T 3qup_A           97 SRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTV  176 (323)
T ss_dssp             C-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCE
T ss_pred             cccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCE
Confidence            6654      999999999999999965321     58999999999999999999999999999999999999999999


Q ss_pred             EEEecCcceecccCC---ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcC
Q 008656          430 KVADFGVARVKAQSG---VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQKG  505 (558)
Q Consensus       430 kL~DFG~a~~~~~~~---~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~~v~~~~  505 (558)
                      ||+|||+++......   ......+++.|+|||++.+..++.++|||||||++|+|++ |..||...+..+....+. .+
T Consensus       177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~-~~  255 (323)
T 3qup_A          177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLI-GG  255 (323)
T ss_dssp             EECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH-TT
T ss_pred             EEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHh-cC
Confidence            999999997654432   2223456788999999999999999999999999999999 999999888766655443 44


Q ss_pred             CCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHH
Q 008656          506 LRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKEV  550 (558)
Q Consensus       506 ~r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~  550 (558)
                      .+...+..+++.+.+|+.+||..||.+|||+.++++.|+++++..
T Consensus       256 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~  300 (323)
T 3qup_A          256 NRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL  300 (323)
T ss_dssp             CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred             CCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence            456778889999999999999999999999999999999998754


No 63 
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00  E-value=3e-45  Score=372.76  Aligned_cols=258  Identities=25%  Similarity=0.449  Sum_probs=221.7

Q ss_pred             CCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCC-ChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeE
Q 008656          291 PKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERI-NSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIV  367 (558)
Q Consensus       291 ~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~-~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV  367 (558)
                      .++|++.++||+|+||.||++++.  ++.||+|++..... .....+.+.+|+.++++++||||+++++++...+.+|+|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv   89 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV   89 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence            478999999999999999999874  77899999865433 445567899999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccCC--c
Q 008656          368 TEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSG--V  445 (558)
Q Consensus       368 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~--~  445 (558)
                      |||++|++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......  .
T Consensus        90 ~e~~~g~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  168 (294)
T 4eqm_A           90 MEYIEGPTLSEYIES-HGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ  168 (294)
T ss_dssp             EECCCSCBHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-------
T ss_pred             EeCCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCccccccccccc
Confidence            999999999999976 4679999999999999999999999999999999999999999999999999997654332  2


Q ss_pred             cccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCC---CCCCCCcHHHHHHH
Q 008656          446 MTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRP---TIPKNSQPKLAELL  522 (558)
Q Consensus       446 ~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~---~ip~~~~~~l~~Ll  522 (558)
                      .....||+.|+|||++.+..++.++||||||+++|+|++|+.||...+...............   ..+..+++.+.++|
T Consensus       169 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  248 (294)
T 4eqm_A          169 TNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVI  248 (294)
T ss_dssp             ------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHH
T ss_pred             cCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHHHHH
Confidence            234569999999999999999999999999999999999999999998887776665544322   24567899999999


Q ss_pred             HHhhhcCCCCCC-CHHHHHHHHHHHHHH
Q 008656          523 ERCWQQDPALRP-DFSEIIEILQQIAKE  549 (558)
Q Consensus       523 ~~cL~~dP~~RP-s~~ell~~L~~l~~~  549 (558)
                      .+||..||.+|| ++.++.+.|++++.+
T Consensus       249 ~~~l~~dp~~R~~~~~~l~~~l~~~~~~  276 (294)
T 4eqm_A          249 LRATEKDKANRYKTIQEMKDDLSSVLHE  276 (294)
T ss_dssp             HHHSCSSGGGSCSSHHHHHHHHHTSSSS
T ss_pred             HHHhcCCHhHccccHHHHHHHHHHHHhh
Confidence            999999999998 899999988876543


No 64 
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00  E-value=2.5e-45  Score=372.32  Aligned_cols=260  Identities=30%  Similarity=0.561  Sum_probs=223.0

Q ss_pred             eeCCCceeeeeeeeecCceEEEEEEE------CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCC
Q 008656          288 EIDPKHLKFGSKVASGSYGDLYRGTY------CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKP  361 (558)
Q Consensus       288 ~i~~~~~~i~~~LG~GsfG~Vy~g~~------~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~  361 (558)
                      .+....|++.++||+|+||.||++++      .++.||||+++... .......+.+|+.++++++||||+++++++...
T Consensus        17 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   95 (302)
T 4e5w_A           17 HFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTED   95 (302)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-
T ss_pred             hhhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecC
Confidence            45667899999999999999999985      56789999998653 223357789999999999999999999999776


Q ss_pred             --CCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCccee
Q 008656          362 --PSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV  439 (558)
Q Consensus       362 --~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~  439 (558)
                        ..+++||||+++++|.+++......+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.
T Consensus        96 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~  175 (302)
T 4e5w_A           96 GGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKA  175 (302)
T ss_dssp             --CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred             CCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECccccccc
Confidence              668999999999999999987677899999999999999999999999999999999999999999999999999987


Q ss_pred             cccCC----ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCC--------------CCHHHHHHHH
Q 008656          440 KAQSG----VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEY--------------LTPLQAAVGV  501 (558)
Q Consensus       440 ~~~~~----~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~--------------~~~~~~~~~v  501 (558)
                      .....    ......||..|+|||++.+..++.++||||||+++|+|++|..|+..              ..........
T Consensus       176 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (302)
T 4e5w_A          176 IETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNT  255 (302)
T ss_dssp             CCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHH
T ss_pred             ccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHH
Confidence            65443    23345678889999999999999999999999999999999987632              2233444455


Q ss_pred             HhcCCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHH
Q 008656          502 VQKGLRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAK  548 (558)
Q Consensus       502 ~~~~~r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~  548 (558)
                      +..+.+...+..+++.+.+||.+||..||.+|||+.++++.|+++++
T Consensus       256 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll~  302 (302)
T 4e5w_A          256 LKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALLK  302 (302)
T ss_dssp             HHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred             HhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhC
Confidence            56667777888999999999999999999999999999999998863


No 65 
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00  E-value=3e-45  Score=369.45  Aligned_cols=255  Identities=33%  Similarity=0.673  Sum_probs=221.4

Q ss_pred             eeCCCceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCChHHH-----HHHHHHHHHHHhccCCCceEEEeeecC
Q 008656          288 EIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQ-----KEFAQEVFIMRKVRHKNVVQFIGACTK  360 (558)
Q Consensus       288 ~i~~~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~~~~-----~~~~~Ev~iL~~l~HpnIv~l~g~~~~  360 (558)
                      .+..++|++.+.||+|+||.||+|++  +++.||+|++..........     +.+.+|+.++++++||||+++++++..
T Consensus        15 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   94 (287)
T 4f0f_A           15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN   94 (287)
T ss_dssp             BCCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETT
T ss_pred             hhhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecC
Confidence            45668899999999999999999998  47889999987654332211     678999999999999999999999976


Q ss_pred             CCCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCcEEeCCCCc-----EEEEe
Q 008656          361 PPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN--IIHRDLKAANLLMDENEV-----VKVAD  433 (558)
Q Consensus       361 ~~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~g--IiHrDLKp~NILl~~~~~-----vkL~D  433 (558)
                      ..  ++||||+++++|.+++......+++..++.++.||+.||.|||++|  |+||||||+|||++.++.     +||+|
T Consensus        95 ~~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~D  172 (287)
T 4f0f_A           95 PP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVAD  172 (287)
T ss_dssp             TT--EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred             CC--eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence            65  7999999999999999876778999999999999999999999999  999999999999988776     99999


Q ss_pred             cCcceecccCCccccCCCCCCccchhhh--cCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHH--HHHHHHHhcCCCCC
Q 008656          434 FGVARVKAQSGVMTAETGTYRWMAPEVI--EHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPL--QAAVGVVQKGLRPT  509 (558)
Q Consensus       434 FG~a~~~~~~~~~~~~~gt~~y~APEv~--~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~--~~~~~v~~~~~r~~  509 (558)
                      ||+++....  ......||+.|+|||++  ....++.++||||||+++|+|++|..||...+..  .....+.....++.
T Consensus       173 fg~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  250 (287)
T 4f0f_A          173 FGLSQQSVH--SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPT  250 (287)
T ss_dssp             CTTCBCCSS--CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCC
T ss_pred             CCccccccc--cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCC
Confidence            999974433  34456799999999999  4566889999999999999999999999866533  33455566677888


Q ss_pred             CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHH
Q 008656          510 IPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQI  546 (558)
Q Consensus       510 ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l  546 (558)
                      ++..+++.+.++|.+||+.||.+||++.++++.|+++
T Consensus       251 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          251 IPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             CCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence            9999999999999999999999999999999998763


No 66 
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00  E-value=1e-44  Score=364.59  Aligned_cols=250  Identities=20%  Similarity=0.385  Sum_probs=224.1

Q ss_pred             CCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeEE
Q 008656          291 PKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVT  368 (558)
Q Consensus       291 ~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV~  368 (558)
                      .++|++.++||+|+||.||+|.+.  ++.||+|++............+.+|+.++++++||||+++++++......++||
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            368999999999999999999884  778999999887767777788999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCc---EEEEecCcceecccCCc
Q 008656          369 EFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV---VKVADFGVARVKAQSGV  445 (558)
Q Consensus       369 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~---vkL~DFG~a~~~~~~~~  445 (558)
                      ||+.|++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+||+++.++.   +||+|||++........
T Consensus        85 e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~  163 (284)
T 3kk8_A           85 DLVTGGELFEDIVA-REFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA  163 (284)
T ss_dssp             CCCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCB
T ss_pred             ecCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCcc
Confidence            99999999999876 467999999999999999999999999999999999999986655   99999999987776666


Q ss_pred             cccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCC--CCCCcHHHHHHHH
Q 008656          446 MTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTI--PKNSQPKLAELLE  523 (558)
Q Consensus       446 ~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~i--p~~~~~~l~~Ll~  523 (558)
                      .....||+.|+|||++.+..++.++||||||+++|+|++|..||...+.......+.........  ...+++++.+||.
T Consensus       164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  243 (284)
T 3kk8_A          164 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID  243 (284)
T ss_dssp             CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHH
T ss_pred             ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHHHHHHHH
Confidence            66678999999999999999999999999999999999999999998887776666554443322  2478999999999


Q ss_pred             HhhhcCCCCCCCHHHHHH
Q 008656          524 RCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       524 ~cL~~dP~~RPs~~ell~  541 (558)
                      +||+.||.+||++.|+++
T Consensus       244 ~~l~~dp~~Rps~~~~l~  261 (284)
T 3kk8_A          244 SMLTVNPKKRITADQALK  261 (284)
T ss_dssp             HHSCSSTTTSCCHHHHTT
T ss_pred             HHcccChhhCCCHHHHhc
Confidence            999999999999999975


No 67 
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00  E-value=2.4e-45  Score=368.84  Aligned_cols=259  Identities=36%  Similarity=0.688  Sum_probs=219.6

Q ss_pred             CCceeeCCCceeeeeeeeecCceEEEEEEECCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecC-CC
Q 008656          284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTK-PP  362 (558)
Q Consensus       284 ~~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~-~~  362 (558)
                      ...|.++.++|++.+.||+|+||.||++++.++.||||+++...    ..+.+.+|+.++++++||||+++++++.. .+
T Consensus        13 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   88 (278)
T 1byg_A           13 RSGWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG   88 (278)
T ss_dssp             --CCBCCGGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC------HHHHHTHHHHTTCCCTTBCCEEEEECCC--
T ss_pred             hccccCChhhceEEeEEecCCCceEEEEEEcCCEEEEEEecchh----HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCC
Confidence            34678889999999999999999999999999999999998543    34678999999999999999999998654 45


Q ss_pred             CceeEEEecCCCCHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecc
Q 008656          363 SLCIVTEFMSGGSVYDYLHKLKG-VFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKA  441 (558)
Q Consensus       363 ~~~lV~E~~~ggsL~~~l~~~~~-~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~  441 (558)
                      ..|+||||+++++|.+++..... .+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++....
T Consensus        89 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~  168 (278)
T 1byg_A           89 GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS  168 (278)
T ss_dssp             CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC-----
T ss_pred             ceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeecccccccc
Confidence            78999999999999999976433 38999999999999999999999999999999999999999999999999987554


Q ss_pred             cCCccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHH
Q 008656          442 QSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAE  520 (558)
Q Consensus       442 ~~~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~~  520 (558)
                      ..  .....+++.|+|||++.+..++.++||||||+++|+|++ |..||...+..+.... +..+.++..+..+++.+.+
T Consensus       169 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~  245 (278)
T 1byg_A          169 ST--QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR-VEKGYKMDAPDGCPPAVYE  245 (278)
T ss_dssp             ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHH-HTTTCCCCCCTTCCHHHHH
T ss_pred             cc--ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HhcCCCCCCcccCCHHHHH
Confidence            33  223467889999999999999999999999999999998 9999988776554433 4456677788899999999


Q ss_pred             HHHHhhhcCCCCCCCHHHHHHHHHHHHHH
Q 008656          521 LLERCWQQDPALRPDFSEIIEILQQIAKE  549 (558)
Q Consensus       521 Ll~~cL~~dP~~RPs~~ell~~L~~l~~~  549 (558)
                      +|.+||..||.+||++.++++.|+++...
T Consensus       246 li~~~l~~~p~~Rps~~~l~~~L~~i~~~  274 (278)
T 1byg_A          246 VMKNCWHLDAAMRPSFLQLREQLEHIKTH  274 (278)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence            99999999999999999999999998754


No 68 
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.2e-45  Score=379.29  Aligned_cols=247  Identities=19%  Similarity=0.315  Sum_probs=220.8

Q ss_pred             CceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeEEE
Q 008656          292 KHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTE  369 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV~E  369 (558)
                      ++|++.+.||+|+||.||++++.  ++.||+|+++..   ......+.+|+.+++.++||||+++++++.....+|+|||
T Consensus         5 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   81 (321)
T 1tki_A            5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK---GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFE   81 (321)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC---THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             hceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC---cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEE
Confidence            68999999999999999999984  678999998754   3345678899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCC--CCcEEEEecCcceecccCCccc
Q 008656          370 FMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDE--NEVVKVADFGVARVKAQSGVMT  447 (558)
Q Consensus       370 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~--~~~vkL~DFG~a~~~~~~~~~~  447 (558)
                      |++|++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++.........
T Consensus        82 ~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~  161 (321)
T 1tki_A           82 FISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFR  161 (321)
T ss_dssp             CCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEE
T ss_pred             eCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCccc
Confidence            99999999999875567999999999999999999999999999999999999987  7899999999998776665566


Q ss_pred             cCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCC--CCCCCcHHHHHHHHHh
Q 008656          448 AETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPT--IPKNSQPKLAELLERC  525 (558)
Q Consensus       448 ~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~--ip~~~~~~l~~Ll~~c  525 (558)
                      ...||+.|+|||++.+..++.++||||||+++|+|++|..||...+..+....+........  ....+++++.+||.+|
T Consensus       162 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~  241 (321)
T 1tki_A          162 LLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRL  241 (321)
T ss_dssp             EEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTT
T ss_pred             cccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHHHHHHHH
Confidence            67899999999999999999999999999999999999999999888777766665543322  2247899999999999


Q ss_pred             hhcCCCCCCCHHHHHH
Q 008656          526 WQQDPALRPDFSEIIE  541 (558)
Q Consensus       526 L~~dP~~RPs~~ell~  541 (558)
                      |..||.+|||+.|+++
T Consensus       242 L~~dp~~Rpt~~e~l~  257 (321)
T 1tki_A          242 LVKERKSRMTASEALQ  257 (321)
T ss_dssp             SCSSGGGSCCHHHHHH
T ss_pred             cCCChhHCcCHHHHhc
Confidence            9999999999999986


No 69 
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00  E-value=1.3e-45  Score=403.49  Aligned_cols=260  Identities=36%  Similarity=0.689  Sum_probs=231.7

Q ss_pred             CCceeeCCCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCC
Q 008656          284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKP  361 (558)
Q Consensus       284 ~~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~  361 (558)
                      .+.|++...+|++.++||+|+||.||+|++.  +..||||+++.....   ...|.+|+.+|++++||||+++++++...
T Consensus       212 ~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~  288 (495)
T 1opk_A          212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTRE  288 (495)
T ss_dssp             SSCCBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSC---HHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             ccccccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccc---hHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence            4679999999999999999999999999986  678999999865433   46799999999999999999999999999


Q ss_pred             CCceeEEEecCCCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceec
Q 008656          362 PSLCIVTEFMSGGSVYDYLHKLK-GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVK  440 (558)
Q Consensus       362 ~~~~lV~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~  440 (558)
                      ..+||||||+++|+|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..
T Consensus       289 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~  368 (495)
T 1opk_A          289 PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLM  368 (495)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECC
T ss_pred             CcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceec
Confidence            99999999999999999997643 45899999999999999999999999999999999999999999999999999865


Q ss_pred             ccCCc--cccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHH
Q 008656          441 AQSGV--MTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPK  517 (558)
Q Consensus       441 ~~~~~--~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~  517 (558)
                      .....  .....++..|+|||++.+..++.++|||||||+||||++ |..||...+..+.. ..+..+.+...|..+++.
T Consensus       369 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  447 (495)
T 1opk_A          369 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLEKDYRMERPEGCPEK  447 (495)
T ss_dssp             TTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH-HHHHTTCCCCCCTTCCHH
T ss_pred             cCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHH-HHHHcCCCCCCCCCCCHH
Confidence            44321  223346788999999999999999999999999999999 99999988766544 445667788889999999


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHHHHHHHH
Q 008656          518 LAELLERCWQQDPALRPDFSEIIEILQQIA  547 (558)
Q Consensus       518 l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~  547 (558)
                      +.+||.+||+.||.+||++.+|++.|+.+.
T Consensus       448 l~~li~~cl~~dP~~RPs~~el~~~L~~~~  477 (495)
T 1opk_A          448 VYELMRACWQWNPSDRPSFAEIHQAFETMF  477 (495)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred             HHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence            999999999999999999999999998764


No 70 
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00  E-value=2.2e-45  Score=370.21  Aligned_cols=262  Identities=36%  Similarity=0.684  Sum_probs=232.6

Q ss_pred             CceeeCCCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCC
Q 008656          285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPP  362 (558)
Q Consensus       285 ~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~  362 (558)
                      +.|++..++|++.++||+|+||.||+|.+.  ++.||+|+++...   ...+.+.+|+.++++++||||+++++++...+
T Consensus         6 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   82 (288)
T 3kfa_A            6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP   82 (288)
T ss_dssp             CTTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS---THHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             hcccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH---HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC
Confidence            578999999999999999999999999986  6789999998542   33577899999999999999999999999999


Q ss_pred             CceeEEEecCCCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecc
Q 008656          363 SLCIVTEFMSGGSVYDYLHKLK-GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKA  441 (558)
Q Consensus       363 ~~~lV~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~  441 (558)
                      ..|+||||++|++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++....
T Consensus        83 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~  162 (288)
T 3kfa_A           83 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT  162 (288)
T ss_dssp             SEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSC
T ss_pred             CEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceecc
Confidence            9999999999999999997643 458999999999999999999999999999999999999999999999999997655


Q ss_pred             cCC--ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHH
Q 008656          442 QSG--VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKL  518 (558)
Q Consensus       442 ~~~--~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l  518 (558)
                      ...  ......+|+.|+|||++.+..++.++||||||+++|+|++ |..||...+..+... .+....+...+..+++.+
T Consensus       163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l  241 (288)
T 3kfa_A          163 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEGCPEKV  241 (288)
T ss_dssp             SSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH-HHHTTCCCCCCTTCCHHH
T ss_pred             CCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-HHhccCCCCCCCCCCHHH
Confidence            432  2223456788999999999999999999999999999999 999998877655443 345566777888999999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHH
Q 008656          519 AELLERCWQQDPALRPDFSEIIEILQQIAKEV  550 (558)
Q Consensus       519 ~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~  550 (558)
                      .+|+.+||..||.+||++.++++.|+++.++.
T Consensus       242 ~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~  273 (288)
T 3kfa_A          242 YELMRACWQWNPSDRPSFAEIHQAFETMFQES  273 (288)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999998765


No 71 
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00  E-value=8.1e-45  Score=375.45  Aligned_cols=249  Identities=22%  Similarity=0.395  Sum_probs=219.4

Q ss_pred             CceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCCh----HHHHHHHHHHHHHHhccCCCceEEEeeecCCCCce
Q 008656          292 KHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINS----DMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLC  365 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~----~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~  365 (558)
                      +.|++.+.||+|+||.||++++.  ++.||+|+++......    .....+.+|+.+|++++||||+++++++.....+|
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   90 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   90 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            57999999999999999999985  7889999997654322    13567899999999999999999999999999999


Q ss_pred             eEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCC----cEEEEecCcceecc
Q 008656          366 IVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENE----VVKVADFGVARVKA  441 (558)
Q Consensus       366 lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~----~vkL~DFG~a~~~~  441 (558)
                      +||||++|++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++    .+||+|||+++...
T Consensus        91 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~  169 (326)
T 2y0a_A           91 LILELVAGGELFDFLAE-KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID  169 (326)
T ss_dssp             EEEECCCSCBHHHHHTT-SSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECC
T ss_pred             EEEEcCCCCCHHHHHHh-cCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECC
Confidence            99999999999999976 56799999999999999999999999999999999999999887    79999999998776


Q ss_pred             cCCccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCC--CCCCCCcHHHH
Q 008656          442 QSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRP--TIPKNSQPKLA  519 (558)
Q Consensus       442 ~~~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~--~ip~~~~~~l~  519 (558)
                      .........||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+....+.......  ..+..+++.+.
T Consensus       170 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (326)
T 2y0a_A          170 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK  249 (326)
T ss_dssp             TTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHH
T ss_pred             CCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccccccCCHHHH
Confidence            5555566789999999999999999999999999999999999999999888777666554433221  12357889999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHH
Q 008656          520 ELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       520 ~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                      +||.+||..||.+|||+.++++
T Consensus       250 ~li~~~L~~dP~~Rpt~~e~l~  271 (326)
T 2y0a_A          250 DFIRRLLVKDPKKRMTIQDSLQ  271 (326)
T ss_dssp             HHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHccCChhhCCCHHHHhc
Confidence            9999999999999999999986


No 72 
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00  E-value=8.5e-45  Score=372.59  Aligned_cols=251  Identities=25%  Similarity=0.355  Sum_probs=210.1

Q ss_pred             CCCceeeeeeeeecCceEEEEEEE-CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeEE
Q 008656          290 DPKHLKFGSKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVT  368 (558)
Q Consensus       290 ~~~~~~i~~~LG~GsfG~Vy~g~~-~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV~  368 (558)
                      -.++|++.++||+|+||.||++++ .++.||+|+++...........+.+|+.++++++||||+++++++..+..+|+||
T Consensus        19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   98 (311)
T 3niz_A           19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF   98 (311)
T ss_dssp             SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred             hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence            347899999999999999999998 5788999999876555555678899999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccC-Cccc
Q 008656          369 EFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQS-GVMT  447 (558)
Q Consensus       369 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~-~~~~  447 (558)
                      ||++ ++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..... ....
T Consensus        99 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~  177 (311)
T 3niz_A           99 EFME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYT  177 (311)
T ss_dssp             ECCS-EEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC---
T ss_pred             cCCC-CCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCccccc
Confidence            9996 5899998876677999999999999999999999999999999999999999999999999999876533 3445


Q ss_pred             cCCCCCCccchhhhcC-CCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCC------------------
Q 008656          448 AETGTYRWMAPEVIEH-KPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRP------------------  508 (558)
Q Consensus       448 ~~~gt~~y~APEv~~~-~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~------------------  508 (558)
                      ...||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+....+......+                  
T Consensus       178 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  257 (311)
T 3niz_A          178 HEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRT  257 (311)
T ss_dssp             CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCC
T ss_pred             CCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcc
Confidence            5678999999999976 568999999999999999999999998776555444433211100                  


Q ss_pred             ----------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          509 ----------TIPKNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       509 ----------~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                                .+...+++++.+||.+||+.||.+|||+.|+++
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  300 (311)
T 3niz_A          258 FQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN  300 (311)
T ss_dssp             CCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             cccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence                      012346789999999999999999999999875


No 73 
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00  E-value=8.7e-46  Score=387.90  Aligned_cols=264  Identities=20%  Similarity=0.297  Sum_probs=213.4

Q ss_pred             eeCCCceeeeeeeeecCceEEEEEEEC-------CceEEEEEecCCCCChHH---------HHHHHHHHHHHHhccCCCc
Q 008656          288 EIDPKHLKFGSKVASGSYGDLYRGTYC-------SQDVAIKVLKPERINSDM---------QKEFAQEVFIMRKVRHKNV  351 (558)
Q Consensus       288 ~i~~~~~~i~~~LG~GsfG~Vy~g~~~-------~~~VAIKvlk~~~~~~~~---------~~~~~~Ev~iL~~l~HpnI  351 (558)
                      ++..++|++.++||+|+||.||+|.+.       ++.||||++.........         ...+.+|+..++.++||||
T Consensus        31 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~i  110 (364)
T 3op5_A           31 DMAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGV  110 (364)
T ss_dssp             CTTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCS
T ss_pred             ccCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCC
Confidence            456789999999999999999999884       367999998765311100         0224456667778889999


Q ss_pred             eEEEeeecCC----CCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeC--C
Q 008656          352 VQFIGACTKP----PSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMD--E  425 (558)
Q Consensus       352 v~l~g~~~~~----~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~--~  425 (558)
                      +++++++...    ...||||||+ |++|.+++....+.+++..++.++.||+.||.|||++||+||||||+|||++  .
T Consensus       111 v~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~  189 (364)
T 3op5_A          111 PKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKN  189 (364)
T ss_dssp             CCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSC
T ss_pred             CeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCC
Confidence            9999998654    4589999999 9999999988667899999999999999999999999999999999999999  8


Q ss_pred             CCcEEEEecCcceecccCCc--------cccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHH
Q 008656          426 NEVVKVADFGVARVKAQSGV--------MTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQA  497 (558)
Q Consensus       426 ~~~vkL~DFG~a~~~~~~~~--------~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~  497 (558)
                      ++.+||+|||+++.......        .....||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus       190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~  269 (364)
T 3op5_A          190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPK  269 (364)
T ss_dssp             TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHH
T ss_pred             CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHH
Confidence            89999999999976543321        1234599999999999999999999999999999999999999985432222


Q ss_pred             HHHHHhcCCCCC---------CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHh
Q 008656          498 AVGVVQKGLRPT---------IPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKEVYS  552 (558)
Q Consensus       498 ~~~v~~~~~r~~---------ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~~~  552 (558)
                      .........+..         .+..+++++.++|.+||..||.+||++.+|++.|++++++...
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~  333 (364)
T 3op5_A          270 YVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGS  333 (364)
T ss_dssp             HHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCC
Confidence            221111111111         1257789999999999999999999999999999999987753


No 74 
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00  E-value=1.1e-44  Score=391.24  Aligned_cols=249  Identities=19%  Similarity=0.362  Sum_probs=220.0

Q ss_pred             CceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeEEE
Q 008656          292 KHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTE  369 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV~E  369 (558)
                      ++|++.++||+|+||.||++..  +++.||+|++............+.+|+.+++.++||||+++++++...+..|+|||
T Consensus        11 ~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E   90 (444)
T 3soa_A           11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFD   90 (444)
T ss_dssp             HHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEEC
T ss_pred             CCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEE
Confidence            5799999999999999999987  57889999998776666667789999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeC---CCCcEEEEecCcceecccCC-c
Q 008656          370 FMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMD---ENEVVKVADFGVARVKAQSG-V  445 (558)
Q Consensus       370 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~---~~~~vkL~DFG~a~~~~~~~-~  445 (558)
                      |+.||+|.+++.. .+.+++..+..++.||+.||.|||++||+||||||+|||++   .++.+||+|||+++...... .
T Consensus        91 ~~~gg~L~~~i~~-~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~~  169 (444)
T 3soa_A           91 LVTGGELFEDIVA-REYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQA  169 (444)
T ss_dssp             CCBCCBHHHHHHH-CSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCCB
T ss_pred             eCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCce
Confidence            9999999999976 56799999999999999999999999999999999999998   46789999999997655432 3


Q ss_pred             cccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCC--CCCCcHHHHHHHH
Q 008656          446 MTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTI--PKNSQPKLAELLE  523 (558)
Q Consensus       446 ~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~i--p~~~~~~l~~Ll~  523 (558)
                      .....||+.|+|||++.+..|+.++|||||||++|+|++|..||...+.......+.........  ...+++++.+||.
T Consensus       170 ~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~  249 (444)
T 3soa_A          170 WFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN  249 (444)
T ss_dssp             CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHH
T ss_pred             eecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccCCHHHHHHHH
Confidence            45668999999999999999999999999999999999999999998887777666655443322  2478999999999


Q ss_pred             HhhhcCCCCCCCHHHHHH
Q 008656          524 RCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       524 ~cL~~dP~~RPs~~ell~  541 (558)
                      +||+.||.+|||+.|+++
T Consensus       250 ~~L~~dP~~Rpta~e~L~  267 (444)
T 3soa_A          250 KMLTINPSKRITAAEALK  267 (444)
T ss_dssp             HHSCSSTTTSCCHHHHHH
T ss_pred             HHcCCChhHCCCHHHHhc
Confidence            999999999999999985


No 75 
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00  E-value=1.1e-44  Score=371.38  Aligned_cols=262  Identities=31%  Similarity=0.573  Sum_probs=228.9

Q ss_pred             CCceeeCCCceeeeeeeeecCceEEEEEEEC-------CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEe
Q 008656          284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYC-------SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG  356 (558)
Q Consensus       284 ~~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~-------~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g  356 (558)
                      .+.|++..++|++.+.||+|+||.||+|++.       ++.||||+++... .......+.+|+.++++++||||+++++
T Consensus        17 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~   95 (322)
T 1p4o_A           17 PDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLG   95 (322)
T ss_dssp             CCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS-CHHHHHHHHHHHHHGGGCCCTTBCCEEE
T ss_pred             hhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc-CHHHHHHHHHHHHHHHhcCCCCEeeeEE
Confidence            3578899999999999999999999999865       4679999998543 3445567999999999999999999999


Q ss_pred             eecCCCCceeEEEecCCCCHHHHHHhhc---------cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCC
Q 008656          357 ACTKPPSLCIVTEFMSGGSVYDYLHKLK---------GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENE  427 (558)
Q Consensus       357 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~---------~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~  427 (558)
                      ++......++||||++|++|.+++....         ..+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus        96 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~  175 (322)
T 1p4o_A           96 VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDF  175 (322)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTC
T ss_pred             EEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCC
Confidence            9999999999999999999999997643         3568999999999999999999999999999999999999999


Q ss_pred             cEEEEecCcceecccCC---ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHh
Q 008656          428 VVKVADFGVARVKAQSG---VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQ  503 (558)
Q Consensus       428 ~vkL~DFG~a~~~~~~~---~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~~v~~  503 (558)
                      .+||+|||+++......   ......+|+.|+|||++.+..++.++||||||+++|+|++ |..||...+..+....+..
T Consensus       176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~  255 (322)
T 1p4o_A          176 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME  255 (322)
T ss_dssp             CEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHT
T ss_pred             eEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHc
Confidence            99999999997554332   1223456889999999999999999999999999999999 8999999887776655443


Q ss_pred             cCCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHH
Q 008656          504 KGLRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIA  547 (558)
Q Consensus       504 ~~~r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~  547 (558)
                       +..+..+..+++.+.+||.+||..||.+||++.++++.|+++.
T Consensus       256 -~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~  298 (322)
T 1p4o_A          256 -GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM  298 (322)
T ss_dssp             -TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred             -CCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhh
Confidence             4455677889999999999999999999999999999998764


No 76 
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.2e-44  Score=366.06  Aligned_cols=263  Identities=31%  Similarity=0.588  Sum_probs=223.9

Q ss_pred             ceeeeeeeeecCceEEEEEEEC--Cc---eEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCc-ee
Q 008656          293 HLKFGSKVASGSYGDLYRGTYC--SQ---DVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSL-CI  366 (558)
Q Consensus       293 ~~~i~~~LG~GsfG~Vy~g~~~--~~---~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~-~l  366 (558)
                      .|++.++||+|+||.||+|++.  ++   .||+|+++.. ......+.+.+|+.++++++||||+++++++...... ++
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  100 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI-TEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHV  100 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTC-CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeecccc-ccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEE
Confidence            4667799999999999999873  22   6999998753 2345567899999999999999999999999766655 99


Q ss_pred             EEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccC---
Q 008656          367 VTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQS---  443 (558)
Q Consensus       367 V~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~---  443 (558)
                      ||||+.+++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....   
T Consensus       101 v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~  180 (298)
T 3pls_A          101 LLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYY  180 (298)
T ss_dssp             EECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGG
T ss_pred             EEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCccc
Confidence            99999999999999876778999999999999999999999999999999999999999999999999999754332   


Q ss_pred             --CccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcC-CCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHH
Q 008656          444 --GVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTG-KLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAE  520 (558)
Q Consensus       444 --~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG-~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~~  520 (558)
                        .......+|+.|+|||.+.+..++.++||||||+++|+|++| .+||...++.+.. ..+........+..+++.+.+
T Consensus       181 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~  259 (298)
T 3pls_A          181 SVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLT-HFLAQGRRLPQPEYCPDSLYQ  259 (298)
T ss_dssp             CSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHH-HHHHTTCCCCCCTTCCHHHHH
T ss_pred             ccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHH-HHhhcCCCCCCCccchHHHHH
Confidence              123345678999999999999999999999999999999995 5556655554433 445556667778889999999


Q ss_pred             HHHHhhhcCCCCCCCHHHHHHHHHHHHHHHH-hhcccC
Q 008656          521 LLERCWQQDPALRPDFSEIIEILQQIAKEVY-SLYVSL  557 (558)
Q Consensus       521 Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~~-~~~~~~  557 (558)
                      ++.+||..||.+|||+.++++.|+++.+++. ..|+.+
T Consensus       260 li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~~~~~l  297 (298)
T 3pls_A          260 VMQQCWEADPAVRPTFRVLVGEVEQIVSALLGDHYVQL  297 (298)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSCCBCCC
T ss_pred             HHHHHccCChhhCcCHHHHHHHHHHHHHHHhccchhhC
Confidence            9999999999999999999999999999884 555543


No 77 
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00  E-value=4.4e-45  Score=369.46  Aligned_cols=249  Identities=23%  Similarity=0.394  Sum_probs=210.4

Q ss_pred             CceeeeeeeeecCceEEEEEEEC-CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeEEEe
Q 008656          292 KHLKFGSKVASGSYGDLYRGTYC-SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEF  370 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~~-~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~  370 (558)
                      ++|++.++||+|+||.||+|++. ++.||+|+++...........+.+|+.++++++||||+++++++...+.+|+||||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence            57999999999999999999984 78899999986654444456788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccC-CccccC
Q 008656          371 MSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQS-GVMTAE  449 (558)
Q Consensus       371 ~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~-~~~~~~  449 (558)
                      +++ +|.+++....+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..... ......
T Consensus        82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  160 (288)
T 1ob3_A           82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE  160 (288)
T ss_dssp             CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--------
T ss_pred             cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCccccccccc
Confidence            965 999999876778999999999999999999999999999999999999999999999999999765432 234456


Q ss_pred             CCCCCccchhhhcC-CCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCC----------------C----
Q 008656          450 TGTYRWMAPEVIEH-KPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLR----------------P----  508 (558)
Q Consensus       450 ~gt~~y~APEv~~~-~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r----------------~----  508 (558)
                      .||+.|+|||++.+ ..++.++|||||||++|+|++|..||...+..+....+......                +    
T Consensus       161 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (288)
T 1ob3_A          161 IVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTV  240 (288)
T ss_dssp             -CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCC
T ss_pred             cccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccccccccc
Confidence            78999999999976 45899999999999999999999999988876665554431100                0    


Q ss_pred             -------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          509 -------TIPKNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       509 -------~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                             .....+++++.+||.+||+.||.+|||+.|+++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          241 YEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             CCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence                   112457899999999999999999999999874


No 78 
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00  E-value=5.8e-45  Score=372.25  Aligned_cols=268  Identities=28%  Similarity=0.508  Sum_probs=222.6

Q ss_pred             CCCceeeCCCceeeeeeeeecCceEEEEEEECC-----ceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEee
Q 008656          283 GTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCS-----QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA  357 (558)
Q Consensus       283 ~~~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~~-----~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~  357 (558)
                      ....+.++.++|++.+.||+|+||.||+|++..     +.||+|+++...........+.+|+.++++++||||++++++
T Consensus        25 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~  104 (313)
T 3brb_A           25 KLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGV  104 (313)
T ss_dssp             CTTTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEE
T ss_pred             hHHhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEE
Confidence            345668888999999999999999999998742     369999998776666677889999999999999999999999


Q ss_pred             ecCCC-----CceeEEEecCCCCHHHHHHhh-----ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCC
Q 008656          358 CTKPP-----SLCIVTEFMSGGSVYDYLHKL-----KGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENE  427 (558)
Q Consensus       358 ~~~~~-----~~~lV~E~~~ggsL~~~l~~~-----~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~  427 (558)
                      +....     ..++||||+++++|.+++...     ...+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus       105 ~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~  184 (313)
T 3brb_A          105 CIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDM  184 (313)
T ss_dssp             EEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTS
T ss_pred             EeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCC
Confidence            87654     359999999999999998532     35689999999999999999999999999999999999999999


Q ss_pred             cEEEEecCcceecccCC---ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHh
Q 008656          428 VVKVADFGVARVKAQSG---VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQ  503 (558)
Q Consensus       428 ~vkL~DFG~a~~~~~~~---~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~~v~~  503 (558)
                      .+||+|||+++......   ......+++.|+|||++.+..++.++||||||+++|+|++ |..||......+.... ..
T Consensus       185 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~-~~  263 (313)
T 3brb_A          185 TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDY-LL  263 (313)
T ss_dssp             CEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHH-HH
T ss_pred             cEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHH-HH
Confidence            99999999997654332   2234457889999999999999999999999999999999 9999988877665544 34


Q ss_pred             cCCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHH
Q 008656          504 KGLRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKEVY  551 (558)
Q Consensus       504 ~~~r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~~  551 (558)
                      .+.++..+..+++.+.++|.+||..||.+||++.++++.|+++.+.+.
T Consensus       264 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp  311 (313)
T 3brb_A          264 HGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP  311 (313)
T ss_dssp             TTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred             cCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence            455677888999999999999999999999999999999999988764


No 79 
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00  E-value=1e-44  Score=374.80  Aligned_cols=251  Identities=25%  Similarity=0.430  Sum_probs=211.1

Q ss_pred             eeCCCceeeeeeeeecCceEEEEEEE-----CCceEEEEEecCCCCC--hHHHHHHHHHHHHHHhccCCCceEEEeeecC
Q 008656          288 EIDPKHLKFGSKVASGSYGDLYRGTY-----CSQDVAIKVLKPERIN--SDMQKEFAQEVFIMRKVRHKNVVQFIGACTK  360 (558)
Q Consensus       288 ~i~~~~~~i~~~LG~GsfG~Vy~g~~-----~~~~VAIKvlk~~~~~--~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~  360 (558)
                      .+..++|++.+.||+|+||.||+++.     .++.||+|+++.....  ......+.+|+.+|++++||||+++++++..
T Consensus        13 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~   92 (327)
T 3a62_A           13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQT   92 (327)
T ss_dssp             CCCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEEC
T ss_pred             CCCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEc
Confidence            46678999999999999999999987     4678999999875432  2334668889999999999999999999999


Q ss_pred             CCCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceec
Q 008656          361 PPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVK  440 (558)
Q Consensus       361 ~~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~  440 (558)
                      .+.+|+||||++|++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus        93 ~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~  171 (327)
T 3a62_A           93 GGKLYLILEYLSGGELFMQLER-EGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKES  171 (327)
T ss_dssp             SSCEEEEEECCTTEEHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred             CCEEEEEEeCCCCCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence            9999999999999999999976 567899999999999999999999999999999999999999999999999999754


Q ss_pred             ccC-CccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHH
Q 008656          441 AQS-GVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLA  519 (558)
Q Consensus       441 ~~~-~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~  519 (558)
                      ... .......||+.|+|||++.+..++.++||||||+++|+|++|..||...+..+....+...  ...+|..+++++.
T Consensus       172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~--~~~~p~~~~~~~~  249 (327)
T 3a62_A          172 IHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC--KLNLPPYLTQEAR  249 (327)
T ss_dssp             -------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT--CCCCCTTSCHHHH
T ss_pred             ccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC--CCCCCCCCCHHHH
Confidence            332 2344567999999999999999999999999999999999999999998887776666554  3457788999999


Q ss_pred             HHHHHhhhcCCCCCC-----CHHHHHH
Q 008656          520 ELLERCWQQDPALRP-----DFSEIIE  541 (558)
Q Consensus       520 ~Ll~~cL~~dP~~RP-----s~~ell~  541 (558)
                      +||.+||..||.+||     ++.++++
T Consensus       250 ~li~~~L~~dp~~R~~~~~~~~~e~l~  276 (327)
T 3a62_A          250 DLLKKLLKRNAASRLGAGPGDAGEVQA  276 (327)
T ss_dssp             HHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred             HHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence            999999999999999     7777764


No 80 
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00  E-value=5.1e-45  Score=368.86  Aligned_cols=260  Identities=18%  Similarity=0.277  Sum_probs=221.5

Q ss_pred             eeCCCceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCChHHHHHHHHHHHHHHhc-cCCCceEEEeeecCCCCc
Q 008656          288 EIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKV-RHKNVVQFIGACTKPPSL  364 (558)
Q Consensus       288 ~i~~~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l-~HpnIv~l~g~~~~~~~~  364 (558)
                      .+..++|++.+.||+|+||.||+|++  .++.||||++......    ..+.+|+.+++.+ +|+|++++++++......
T Consensus         6 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~   81 (298)
T 1csn_A            6 NVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA----PQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHN   81 (298)
T ss_dssp             CEETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTS----CCHHHHHHHHHHTTTCTTCCCEEEEEEETTEE
T ss_pred             cccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCcc----HHHHHHHHHHHHHhcCCCCCeEEeecCCCcee
Confidence            44567899999999999999999996  5789999998754322    3577899999999 799999999999999999


Q ss_pred             eeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCc-----EEEEecCccee
Q 008656          365 CIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV-----VKVADFGVARV  439 (558)
Q Consensus       365 ~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~-----vkL~DFG~a~~  439 (558)
                      ++||||+ |++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++.     +||+|||+++.
T Consensus        82 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~  160 (298)
T 1csn_A           82 VLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF  160 (298)
T ss_dssp             EEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred             EEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccc
Confidence            9999999 99999999876667999999999999999999999999999999999999987765     99999999986


Q ss_pred             cccCCc--------cccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCC---HHHHHHHHHhcCC--
Q 008656          440 KAQSGV--------MTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLT---PLQAAVGVVQKGL--  506 (558)
Q Consensus       440 ~~~~~~--------~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~---~~~~~~~v~~~~~--  506 (558)
                      ......        .....||+.|+|||++.+..++.++||||||+++|+|++|+.||...+   ..+....+.....  
T Consensus       161 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  240 (298)
T 1csn_A          161 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST  240 (298)
T ss_dssp             SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHS
T ss_pred             cccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCc
Confidence            554321        244579999999999999999999999999999999999999998743   3333333322211  


Q ss_pred             -CCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHh
Q 008656          507 -RPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKEVYS  552 (558)
Q Consensus       507 -r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~~~  552 (558)
                       .+.....+++++.+++.+||..||.+||++.+|++.|+++.++...
T Consensus       241 ~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~  287 (298)
T 1csn_A          241 PLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNT  287 (298)
T ss_dssp             CHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred             cHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCC
Confidence             1223457899999999999999999999999999999999987753


No 81 
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00  E-value=3.8e-45  Score=377.49  Aligned_cols=260  Identities=30%  Similarity=0.603  Sum_probs=220.0

Q ss_pred             eeCCCceeeeeeeeecCceEEEEEEEC--Cce----EEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCC
Q 008656          288 EIDPKHLKFGSKVASGSYGDLYRGTYC--SQD----VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKP  361 (558)
Q Consensus       288 ~i~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~----VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~  361 (558)
                      .+..++|++.++||+|+||.||+|++.  ++.    ||+|.++... .....+.+.+|+.++++++||||+++++++..+
T Consensus        11 ~l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   89 (327)
T 3poz_A           11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTS   89 (327)
T ss_dssp             ECCGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS
T ss_pred             hcCHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc-CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC
Confidence            456688999999999999999999874  333    5888776432 334457899999999999999999999999875


Q ss_pred             CCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecc
Q 008656          362 PSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKA  441 (558)
Q Consensus       362 ~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~  441 (558)
                       ..++|+||+.+|+|.+++....+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus        90 -~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~  168 (327)
T 3poz_A           90 -TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG  168 (327)
T ss_dssp             -SEEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHT
T ss_pred             -CeEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEcc
Confidence             4789999999999999998877889999999999999999999999999999999999999999999999999998654


Q ss_pred             cCC---ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHH
Q 008656          442 QSG---VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPK  517 (558)
Q Consensus       442 ~~~---~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~  517 (558)
                      ...   ......+|+.|+|||++.+..++.++|||||||++|||++ |..||...+..+.. ..+..+.+...+..++..
T Consensus       169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  247 (327)
T 3poz_A          169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQPPICTID  247 (327)
T ss_dssp             TTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH-HHHHTTCCCCCCTTBCHH
T ss_pred             CCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHH-HHHHcCCCCCCCccCCHH
Confidence            432   2233456889999999999999999999999999999999 99999987765543 445566677788899999


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHH
Q 008656          518 LAELLERCWQQDPALRPDFSEIIEILQQIAKEV  550 (558)
Q Consensus       518 l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~  550 (558)
                      +.+++.+||+.||.+||++.++++.|+.+..+.
T Consensus       248 ~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~~  280 (327)
T 3poz_A          248 VYMIMVKCWMIDADSRPKFRELIIEFSKMARDP  280 (327)
T ss_dssp             HHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTSH
T ss_pred             HHHHHHHHcCCChhhCCCHHHHHHHHHHHHhhh
Confidence            999999999999999999999999999987654


No 82 
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00  E-value=1.8e-45  Score=385.77  Aligned_cols=251  Identities=24%  Similarity=0.379  Sum_probs=215.0

Q ss_pred             eeCCCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCC-ChHHHHHHHHHHHHHHhc-cCCCceEEEeeecCCCC
Q 008656          288 EIDPKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERI-NSDMQKEFAQEVFIMRKV-RHKNVVQFIGACTKPPS  363 (558)
Q Consensus       288 ~i~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~-~~~~~~~~~~Ev~iL~~l-~HpnIv~l~g~~~~~~~  363 (558)
                      .+..++|++.+.||+|+||.||++++.  ++.||||+++.... .......+.+|..+++.+ +||||+++++++.....
T Consensus        19 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~   98 (353)
T 3txo_A           19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDR   98 (353)
T ss_dssp             ----CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred             CCchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCE
Confidence            456678999999999999999999984  67899999985422 223346688899999988 69999999999999999


Q ss_pred             ceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccC
Q 008656          364 LCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQS  443 (558)
Q Consensus       364 ~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~  443 (558)
                      +|+||||++||+|.+++.+ .+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus        99 ~~lv~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~  177 (353)
T 3txo_A           99 LFFVMEFVNGGDLMFHIQK-SRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN  177 (353)
T ss_dssp             EEEEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-
T ss_pred             EEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeecccC
Confidence            9999999999999999976 567999999999999999999999999999999999999999999999999999854332


Q ss_pred             -CccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHH
Q 008656          444 -GVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELL  522 (558)
Q Consensus       444 -~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~~Ll  522 (558)
                       ......+||+.|+|||++.+..|+.++|||||||++|||++|..||...+..+....+....  ..+|..+++.+.+||
T Consensus       178 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~--~~~p~~~~~~~~~li  255 (353)
T 3txo_A          178 GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDE--VVYPTWLHEDATGIL  255 (353)
T ss_dssp             --------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--CCCCTTSCHHHHHHH
T ss_pred             CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCC--CCCCCCCCHHHHHHH
Confidence             34455689999999999999999999999999999999999999999998888777766543  456788999999999


Q ss_pred             HHhhhcCCCCCCCH------HHHHH
Q 008656          523 ERCWQQDPALRPDF------SEIIE  541 (558)
Q Consensus       523 ~~cL~~dP~~RPs~------~ell~  541 (558)
                      .+||..||.+||++      .++++
T Consensus       256 ~~lL~~dP~~R~~~~~~~~~~~il~  280 (353)
T 3txo_A          256 KSFMTKNPTMRLGSLTQGGEHAILR  280 (353)
T ss_dssp             HHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred             HHHhhhCHHHccCCcccCCHHHHhh
Confidence            99999999999998      66664


No 83 
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00  E-value=1.6e-45  Score=406.54  Aligned_cols=268  Identities=35%  Similarity=0.650  Sum_probs=235.5

Q ss_pred             CCceeeCCCceeeeeeeeecCceEEEEEEECC-ceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCC
Q 008656          284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYCS-QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPP  362 (558)
Q Consensus       284 ~~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~~-~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~  362 (558)
                      .+.|++..++|++.++||+|+||.||+|++.+ ..||||+++.....   .+.|.+|+.+|++++||||+++++++.. .
T Consensus       259 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~~~~~~~~-~  334 (535)
T 2h8h_A          259 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSE-E  334 (535)
T ss_dssp             TTCSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSC---HHHHHHHHHHHHHCCCTTBCCEEEEECS-S
T ss_pred             ccceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCC---HHHHHHHHHHHHhCCCCCEeeEEEEEee-c
Confidence            46799999999999999999999999999975 56999999876433   3579999999999999999999999876 6


Q ss_pred             CceeEEEecCCCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecc
Q 008656          363 SLCIVTEFMSGGSVYDYLHKLK-GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKA  441 (558)
Q Consensus       363 ~~~lV~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~  441 (558)
                      .+||||||+.+|+|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus       335 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  414 (535)
T 2h8h_A          335 PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE  414 (535)
T ss_dssp             SCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCC
T ss_pred             cceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecC
Confidence            7899999999999999997543 458999999999999999999999999999999999999999999999999997654


Q ss_pred             cCC--ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHH
Q 008656          442 QSG--VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKL  518 (558)
Q Consensus       442 ~~~--~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l  518 (558)
                      ...  ......++..|+|||++.+..++.++|||||||+||||++ |..||.+....+.... +..+.+...+..+++.+
T Consensus       415 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~-i~~~~~~~~~~~~~~~l  493 (535)
T 2h8h_A          415 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESL  493 (535)
T ss_dssp             CHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHH-HHTTCCCCCCTTCCHHH
T ss_pred             CCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HHcCCCCCCCCCCCHHH
Confidence            321  1223456789999999999999999999999999999999 9999999887766544 45677778889999999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHhhccc
Q 008656          519 AELLERCWQQDPALRPDFSEIIEILQQIAKEVYSLYVS  556 (558)
Q Consensus       519 ~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~~~~~~~  556 (558)
                      .+||.+||..||++||++.+|++.|+++......+|..
T Consensus       494 ~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~~~~~  531 (535)
T 2h8h_A          494 HDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQP  531 (535)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCSCSSCC
T ss_pred             HHHHHHHcCCChhHCcCHHHHHHHHHHHhhccCcccCc
Confidence            99999999999999999999999999887766666543


No 84 
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00  E-value=1.7e-44  Score=365.47  Aligned_cols=249  Identities=22%  Similarity=0.361  Sum_probs=211.7

Q ss_pred             CceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeEEE
Q 008656          292 KHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTE  369 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV~E  369 (558)
                      ++|++.++||+|+||.||+|++  +++.||||+++...........+.+|+.++++++||||+++++++..+..+|+|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            5799999999999999999998  46789999998776666666889999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccC-Ccccc
Q 008656          370 FMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQS-GVMTA  448 (558)
Q Consensus       370 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~-~~~~~  448 (558)
                      |++ ++|.+++....+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..... .....
T Consensus        82 ~~~-~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  160 (292)
T 3o0g_A           82 FCD-QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSA  160 (292)
T ss_dssp             CCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCCS
T ss_pred             cCC-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCccccccC
Confidence            996 4777777666788999999999999999999999999999999999999999999999999999866433 34456


Q ss_pred             CCCCCCccchhhhcCCC-CCchHHHHHHHHHHHHHHcCCCC-CCCCCHHHHHHHHHhcCCC-------------------
Q 008656          449 ETGTYRWMAPEVIEHKP-YDHKADVFSFGIVLWELLTGKLP-YEYLTPLQAAVGVVQKGLR-------------------  507 (558)
Q Consensus       449 ~~gt~~y~APEv~~~~~-~s~ksDVwSlGilL~elltG~~P-f~~~~~~~~~~~v~~~~~r-------------------  507 (558)
                      ..||+.|+|||++.+.. ++.++|||||||++|+|++|..| |...+..+....+......                   
T Consensus       161 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  240 (292)
T 3o0g_A          161 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYP  240 (292)
T ss_dssp             CCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCC
T ss_pred             CccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccc
Confidence            68899999999998765 89999999999999999998777 5555554444443321110                   


Q ss_pred             --------CCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          508 --------PTIPKNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       508 --------~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                              ......+++.+.+||.+||+.||.+|||+.|+++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  282 (292)
T 3o0g_A          241 MYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             CCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence                    1122357899999999999999999999999875


No 85 
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00  E-value=2.8e-45  Score=377.89  Aligned_cols=260  Identities=28%  Similarity=0.567  Sum_probs=221.4

Q ss_pred             eeCCCceeeeeeeeecCceEEEEEEEC--Cce----EEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCC
Q 008656          288 EIDPKHLKFGSKVASGSYGDLYRGTYC--SQD----VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKP  361 (558)
Q Consensus       288 ~i~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~----VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~  361 (558)
                      .+..++|++.++||+|+||.||+|++.  ++.    ||+|++..... ......+.+|+.++++++||||+++++++. .
T Consensus         9 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~   86 (325)
T 3kex_A            9 IFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG-RQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-G   86 (325)
T ss_dssp             BCCTTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTS-CSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-B
T ss_pred             hcCHhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEecccccc-HHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-C
Confidence            456688999999999999999999984  343    78887764422 222356778999999999999999999986 4


Q ss_pred             CCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecc
Q 008656          362 PSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKA  441 (558)
Q Consensus       362 ~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~  441 (558)
                      ...++||||+.+|+|.+++....+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus        87 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~  166 (325)
T 3kex_A           87 SSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLP  166 (325)
T ss_dssp             SSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSC
T ss_pred             CccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccccC
Confidence            56899999999999999998766789999999999999999999999999999999999999999999999999998654


Q ss_pred             cCC---ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHH
Q 008656          442 QSG---VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPK  517 (558)
Q Consensus       442 ~~~---~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~  517 (558)
                      ...   ......||..|+|||++.+..++.++||||||+++|+|++ |..||......+... .+..+.+...+..+++.
T Consensus       167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  245 (325)
T 3kex_A          167 PDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPD-LLEKGERLAQPQICTID  245 (325)
T ss_dssp             CCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHH-HHHTTCBCCCCTTBCTT
T ss_pred             cccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHH-HHHcCCCCCCCCcCcHH
Confidence            332   2344567889999999999999999999999999999999 999999877655443 34556667788889999


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHH
Q 008656          518 LAELLERCWQQDPALRPDFSEIIEILQQIAKEV  550 (558)
Q Consensus       518 l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~  550 (558)
                      +.++|.+||..||.+||++.++++.|+++.++.
T Consensus       246 ~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~  278 (325)
T 3kex_A          246 VYMVMVKCWMIDENIRPTFKELANEFTRMARDP  278 (325)
T ss_dssp             TTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSH
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence            999999999999999999999999999987654


No 86 
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00  E-value=1.1e-44  Score=373.16  Aligned_cols=262  Identities=29%  Similarity=0.521  Sum_probs=225.3

Q ss_pred             eeCCCceeeeeeeeecCceEEEEEEE------CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeec--
Q 008656          288 EIDPKHLKFGSKVASGSYGDLYRGTY------CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACT--  359 (558)
Q Consensus       288 ~i~~~~~~i~~~LG~GsfG~Vy~g~~------~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~--  359 (558)
                      -++.++|++.++||+|+||.||++++      .++.||||+++..  .....+.+.+|+.++++++||||+++++++.  
T Consensus        19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   96 (327)
T 3lxl_A           19 IFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQILKALHSDFIVKYRGVSYGP   96 (327)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS
T ss_pred             hhchhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC--CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecC
Confidence            36678999999999999999999985      4678999999864  3455678999999999999999999999875  


Q ss_pred             CCCCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCccee
Q 008656          360 KPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV  439 (558)
Q Consensus       360 ~~~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~  439 (558)
                      ....+|+||||++|++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus        97 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~  176 (327)
T 3lxl_A           97 GRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKL  176 (327)
T ss_dssp             SSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEE
T ss_pred             CCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEccccccee
Confidence            45568999999999999999988677899999999999999999999999999999999999999999999999999986


Q ss_pred             cccCC----ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCH--------------HHHHHHH
Q 008656          440 KAQSG----VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTP--------------LQAAVGV  501 (558)
Q Consensus       440 ~~~~~----~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~--------------~~~~~~v  501 (558)
                      .....    ......||..|+|||++.+..++.++||||||+++|+|++|..||.....              .......
T Consensus       177 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (327)
T 3lxl_A          177 LPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLEL  256 (327)
T ss_dssp             CCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHH
T ss_pred             cccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHH
Confidence            64432    22344678889999999999999999999999999999999999854322              2344455


Q ss_pred             HhcCCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHH
Q 008656          502 VQKGLRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKEVY  551 (558)
Q Consensus       502 ~~~~~r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~~  551 (558)
                      +..+.+...+..+++.+.+||.+||..||.+||++.++++.|+.+..+..
T Consensus       257 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~  306 (327)
T 3lxl_A          257 LEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR  306 (327)
T ss_dssp             HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred             hhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence            66677778889999999999999999999999999999999999876543


No 87 
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00  E-value=9e-45  Score=383.28  Aligned_cols=257  Identities=20%  Similarity=0.382  Sum_probs=216.3

Q ss_pred             CceeeCCCceeeeeeeeec--CceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecC
Q 008656          285 DVWEIDPKHLKFGSKVASG--SYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTK  360 (558)
Q Consensus       285 ~~~~i~~~~~~i~~~LG~G--sfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~  360 (558)
                      ..+..+.++|++.++||+|  +||.||++++.  ++.||||+++...........+.+|+.+++.++||||+++++++..
T Consensus        18 s~~~~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~   97 (389)
T 3gni_B           18 SSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIA   97 (389)
T ss_dssp             CCCCCCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred             hcccCCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEE
Confidence            3455667899999999999  99999999985  7889999998877667777889999999999999999999999999


Q ss_pred             CCCceeEEEecCCCCHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCccee
Q 008656          361 PPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV  439 (558)
Q Consensus       361 ~~~~~lV~E~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~  439 (558)
                      .+.+|+||||++|++|.+++... .+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||.+..
T Consensus        98 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~  177 (389)
T 3gni_B           98 DNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLS  177 (389)
T ss_dssp             TTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred             CCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEccccccee
Confidence            99999999999999999999764 25699999999999999999999999999999999999999999999999998864


Q ss_pred             cccCC--------ccccCCCCCCccchhhhcC--CCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCC---
Q 008656          440 KAQSG--------VMTAETGTYRWMAPEVIEH--KPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGL---  506 (558)
Q Consensus       440 ~~~~~--------~~~~~~gt~~y~APEv~~~--~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~---  506 (558)
                      ....+        ......||+.|+|||++.+  ..|+.++|||||||++|+|++|+.||.+.+..+..........   
T Consensus       178 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  257 (389)
T 3gni_B          178 MISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCL  257 (389)
T ss_dssp             CEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC--------
T ss_pred             eccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcc
Confidence            33221        2233478999999999987  6899999999999999999999999987665544433322111   


Q ss_pred             -----------------------------------------CCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          507 -----------------------------------------RPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       507 -----------------------------------------r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                                                               ....+..+++.+.+||.+||+.||.+|||+.|+++
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~  333 (389)
T 3gni_B          258 LDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN  333 (389)
T ss_dssp             ------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             ccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence                                                     01234567899999999999999999999999974


No 88 
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00  E-value=6.3e-45  Score=369.76  Aligned_cols=250  Identities=26%  Similarity=0.383  Sum_probs=210.5

Q ss_pred             CCCceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCCh------------------------HHHHHHHHHHHHH
Q 008656          290 DPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINS------------------------DMQKEFAQEVFIM  343 (558)
Q Consensus       290 ~~~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~------------------------~~~~~~~~Ev~iL  343 (558)
                      ..++|++.+.||+|+||.||+|++  .++.||||++.......                        .....+.+|+.++
T Consensus        11 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   90 (298)
T 2zv2_A           11 QLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAIL   90 (298)
T ss_dssp             EETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHH
T ss_pred             eecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHH
Confidence            346899999999999999999987  47789999997653211                        1235688999999


Q ss_pred             HhccCCCceEEEeeecC--CCCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcE
Q 008656          344 RKVRHKNVVQFIGACTK--PPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANL  421 (558)
Q Consensus       344 ~~l~HpnIv~l~g~~~~--~~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NI  421 (558)
                      ++++||||+++++++..  ...+|+||||+++++|.+++.  .+.+++..++.++.||+.||.|||++||+||||||+||
T Consensus        91 ~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Ni  168 (298)
T 2zv2_A           91 KKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT--LKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNL  168 (298)
T ss_dssp             HTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC--SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGE
T ss_pred             HhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHE
Confidence            99999999999999876  567899999999999988754  35799999999999999999999999999999999999


Q ss_pred             EeCCCCcEEEEecCcceecccCC-ccccCCCCCCccchhhhcCCC---CCchHHHHHHHHHHHHHHcCCCCCCCCCHHHH
Q 008656          422 LMDENEVVKVADFGVARVKAQSG-VMTAETGTYRWMAPEVIEHKP---YDHKADVFSFGIVLWELLTGKLPYEYLTPLQA  497 (558)
Q Consensus       422 Ll~~~~~vkL~DFG~a~~~~~~~-~~~~~~gt~~y~APEv~~~~~---~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~  497 (558)
                      |++.++.+||+|||+++...... ......||+.|+|||++.+..   ++.++|||||||++|+|++|..||........
T Consensus       169 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~  248 (298)
T 2zv2_A          169 LVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCL  248 (298)
T ss_dssp             EECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             EECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHH
Confidence            99999999999999998655432 345568999999999998765   47899999999999999999999998887766


Q ss_pred             HHHHHhcCCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          498 AVGVVQKGLRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       498 ~~~v~~~~~r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                      ...+............+++.+.+||.+||+.||.+||++.|+++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          249 HSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             HHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             HHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence            65555555444445678999999999999999999999999864


No 89 
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.7e-44  Score=404.62  Aligned_cols=264  Identities=28%  Similarity=0.547  Sum_probs=227.4

Q ss_pred             ceeeCCCceeeee-eeeecCceEEEEEEEC----CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecC
Q 008656          286 VWEIDPKHLKFGS-KVASGSYGDLYRGTYC----SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTK  360 (558)
Q Consensus       286 ~~~i~~~~~~i~~-~LG~GsfG~Vy~g~~~----~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~  360 (558)
                      .|.+...++.+.+ +||+|+||.||+|.+.    +..||||+++... .....+.|.+|+.+|++++|||||++++++..
T Consensus       329 ~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~  407 (613)
T 2ozo_A          329 KLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA  407 (613)
T ss_dssp             CSBCCTTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC-SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES
T ss_pred             ceeccccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc
Confidence            5667777888877 8999999999999873    4569999998653 23345789999999999999999999999976


Q ss_pred             CCCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceec
Q 008656          361 PPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVK  440 (558)
Q Consensus       361 ~~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~  440 (558)
                       +.+|+||||+.||+|.+++......+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..
T Consensus       408 -~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~  486 (613)
T 2ozo_A          408 -EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKAL  486 (613)
T ss_dssp             -SSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTC
T ss_pred             -CCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccc
Confidence             5699999999999999999876677999999999999999999999999999999999999999999999999999765


Q ss_pred             ccCC----ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCc
Q 008656          441 AQSG----VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQ  515 (558)
Q Consensus       441 ~~~~----~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~  515 (558)
                      ....    ......+|+.|+|||++.+..|+.++|||||||+||||++ |+.||...+..+.... +..+.++..|..++
T Consensus       487 ~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~-i~~~~~~~~p~~~~  565 (613)
T 2ozo_A          487 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAF-IEQGKRMECPPECP  565 (613)
T ss_dssp             C--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHH-HHTTCCCCCCTTCC
T ss_pred             cCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH-HHcCCCCCCCCcCC
Confidence            4322    1123345689999999999999999999999999999998 9999999887765544 55677888899999


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHh
Q 008656          516 PKLAELLERCWQQDPALRPDFSEIIEILQQIAKEVYS  552 (558)
Q Consensus       516 ~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~~~  552 (558)
                      +++.+||.+||..||.+||++.++++.|+++...+..
T Consensus       566 ~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~  602 (613)
T 2ozo_A          566 PELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS  602 (613)
T ss_dssp             HHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhcc
Confidence            9999999999999999999999999999999877643


No 90 
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00  E-value=9.2e-45  Score=374.78  Aligned_cols=247  Identities=26%  Similarity=0.455  Sum_probs=219.6

Q ss_pred             CCCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCC-hHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCcee
Q 008656          290 DPKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERIN-SDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCI  366 (558)
Q Consensus       290 ~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~-~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~l  366 (558)
                      ..++|++.+.||+|+||.||+++..  ++.||+|+++..... ......+.+|+.+++.++||||+++++++.....+|+
T Consensus         4 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l   83 (318)
T 1fot_A            4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFM   83 (318)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEE
T ss_pred             ChHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEE
Confidence            4468999999999999999999984  788999999754221 1234678889999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccCCcc
Q 008656          367 VTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVM  446 (558)
Q Consensus       367 V~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~  446 (558)
                      ||||++||+|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++....  ..
T Consensus        84 v~e~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~--~~  160 (318)
T 1fot_A           84 IMDYIEGGELFSLLRK-SQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD--VT  160 (318)
T ss_dssp             EECCCCSCBHHHHHHH-TSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS--CB
T ss_pred             EEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCC--cc
Confidence            9999999999999976 56799999999999999999999999999999999999999999999999999986543  23


Q ss_pred             ccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhh
Q 008656          447 TAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELLERCW  526 (558)
Q Consensus       447 ~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~~Ll~~cL  526 (558)
                      ....||+.|+|||++.+..|+.++|||||||++|||++|..||...+..+....+....  ..+|..+++++.+||.+||
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~--~~~p~~~~~~~~~li~~lL  238 (318)
T 1fot_A          161 YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAE--LRFPPFFNEDVKDLLSRLI  238 (318)
T ss_dssp             CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCC--CCCCTTSCHHHHHHHHHHT
T ss_pred             ccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--CCCCCCCCHHHHHHHHHHh
Confidence            45679999999999999999999999999999999999999999988887777766654  4567889999999999999


Q ss_pred             hcCCCCCC-----CHHHHHH
Q 008656          527 QQDPALRP-----DFSEIIE  541 (558)
Q Consensus       527 ~~dP~~RP-----s~~ell~  541 (558)
                      ..||.+||     ++.++++
T Consensus       239 ~~dp~~R~~~~~~~~~~i~~  258 (318)
T 1fot_A          239 TRDLSQRLGNLQNGTEDVKN  258 (318)
T ss_dssp             CSCTTTCTTSSTTTTHHHHT
T ss_pred             ccCHHHcCCCcCCCHHHHhc
Confidence            99999999     8888873


No 91 
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00  E-value=1.5e-44  Score=384.66  Aligned_cols=246  Identities=21%  Similarity=0.391  Sum_probs=210.9

Q ss_pred             eeCCCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCCh-HHHHHHHHHHHHHHhc-cCCCceEEEeeecCCCC
Q 008656          288 EIDPKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINS-DMQKEFAQEVFIMRKV-RHKNVVQFIGACTKPPS  363 (558)
Q Consensus       288 ~i~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~-~~~~~~~~Ev~iL~~l-~HpnIv~l~g~~~~~~~  363 (558)
                      .+..++|++.++||+|+||.||++++.  ++.||||+++...... .....+.+|..+++++ +||||+++++++.....
T Consensus        48 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~  127 (396)
T 4dc2_A           48 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR  127 (396)
T ss_dssp             -CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred             CCChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCE
Confidence            456678999999999999999999985  6789999998654432 3345688899999887 89999999999999999


Q ss_pred             ceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecc-c
Q 008656          364 LCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKA-Q  442 (558)
Q Consensus       364 ~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~-~  442 (558)
                      +|+||||++||+|.+++.+ .+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++... .
T Consensus       128 ~~lV~E~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~  206 (396)
T 4dc2_A          128 LFFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP  206 (396)
T ss_dssp             EEEEEECCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred             EEEEEEcCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence            9999999999999999986 5679999999999999999999999999999999999999999999999999998633 3


Q ss_pred             CCccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCH--------HH-HHHHHHhcCCCCCCCCC
Q 008656          443 SGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTP--------LQ-AAVGVVQKGLRPTIPKN  513 (558)
Q Consensus       443 ~~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~--------~~-~~~~v~~~~~r~~ip~~  513 (558)
                      .......+||+.|+|||++.+..|+.++|||||||++|||++|+.||.....        .+ ....+..  ....+|..
T Consensus       207 ~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~--~~~~~p~~  284 (396)
T 4dc2_A          207 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--KQIRIPRS  284 (396)
T ss_dssp             TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHH--CCCCCCTT
T ss_pred             CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhc--cccCCCCc
Confidence            3445567899999999999999999999999999999999999999964321        12 2222222  34567889


Q ss_pred             CcHHHHHHHHHhhhcCCCCCCCH
Q 008656          514 SQPKLAELLERCWQQDPALRPDF  536 (558)
Q Consensus       514 ~~~~l~~Ll~~cL~~dP~~RPs~  536 (558)
                      +++++.+||.+||+.||.+||++
T Consensus       285 ~s~~~~~li~~lL~~dP~~R~~~  307 (396)
T 4dc2_A          285 LSVKAASVLKSFLNKDPKERLGC  307 (396)
T ss_dssp             SCHHHHHHHHHHTCSCTTTSTTC
T ss_pred             CCHHHHHHHHHHhcCCHhHcCCC
Confidence            99999999999999999999985


No 92 
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00  E-value=2.1e-44  Score=368.69  Aligned_cols=255  Identities=35%  Similarity=0.689  Sum_probs=215.1

Q ss_pred             eeCCCceeeeeeeeecCceEEEEEEECCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeE
Q 008656          288 EIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIV  367 (558)
Q Consensus       288 ~i~~~~~~i~~~LG~GsfG~Vy~g~~~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV  367 (558)
                      .++.++|++.+.||+|+||.||++++.++.||||+++..    ...+.+.+|+.++++++||||+++++++.+  ..|+|
T Consensus         4 ~i~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv   77 (307)
T 2eva_A            4 MIDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESE----SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLV   77 (307)
T ss_dssp             BCCGGGEEEEEEEECCSSSEEEEEEETTEEEEEEECSST----THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEE
T ss_pred             cCCHhHeeeeeEeecCCCceEEEEEECCeeEEEEEecCh----hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEE
Confidence            467789999999999999999999999999999998743    345779999999999999999999999874  48999


Q ss_pred             EEecCCCCHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCCCcEEeCCCCc-EEEEecCcceecc
Q 008656          368 TEFMSGGSVYDYLHKLKG--VFKLPSLLKVAIDVSKGMNYLHQ---NNIIHRDLKAANLLMDENEV-VKVADFGVARVKA  441 (558)
Q Consensus       368 ~E~~~ggsL~~~l~~~~~--~l~~~~~~~i~~qI~~aL~yLH~---~gIiHrDLKp~NILl~~~~~-vkL~DFG~a~~~~  441 (558)
                      |||++|++|.+++.....  .++...++.++.||+.||.|||+   +||+||||||+|||++.++. +||+|||++....
T Consensus        78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~  157 (307)
T 2eva_A           78 MEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ  157 (307)
T ss_dssp             EECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-----
T ss_pred             EEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccc
Confidence            999999999999976432  47888999999999999999999   89999999999999998886 7999999997543


Q ss_pred             cCCccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCH-HHHHHHHHhcCCCCCCCCCCcHHHHH
Q 008656          442 QSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTP-LQAAVGVVQKGLRPTIPKNSQPKLAE  520 (558)
Q Consensus       442 ~~~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~-~~~~~~v~~~~~r~~ip~~~~~~l~~  520 (558)
                      ..  .....||+.|+|||++.+..++.++||||||+++|+|++|+.||..... ..........+.++..+..+++.+.+
T Consensus       158 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  235 (307)
T 2eva_A          158 TH--MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIES  235 (307)
T ss_dssp             ---------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHHHH
T ss_pred             cc--cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccCHHHHH
Confidence            32  3345699999999999999999999999999999999999999986532 22222334456677788899999999


Q ss_pred             HHHHhhhcCCCCCCCHHHHHHHHHHHHHHH
Q 008656          521 LLERCWQQDPALRPDFSEIIEILQQIAKEV  550 (558)
Q Consensus       521 Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~  550 (558)
                      +|.+||+.||.+|||+.++++.|+.+.+.+
T Consensus       236 li~~~l~~dp~~Rps~~ell~~L~~~~~~~  265 (307)
T 2eva_A          236 LMTRCWSKDPSQRPSMEEIVKIMTHLMRYF  265 (307)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred             HHHHHhcCChhhCcCHHHHHHHHHHHHHhc
Confidence            999999999999999999999999987644


No 93 
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00  E-value=2.6e-44  Score=375.46  Aligned_cols=245  Identities=22%  Similarity=0.399  Sum_probs=212.4

Q ss_pred             eCCCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCC-ChHHHHHHHHHHHHHHhc-cCCCceEEEeeecCCCCc
Q 008656          289 IDPKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERI-NSDMQKEFAQEVFIMRKV-RHKNVVQFIGACTKPPSL  364 (558)
Q Consensus       289 i~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~-~~~~~~~~~~Ev~iL~~l-~HpnIv~l~g~~~~~~~~  364 (558)
                      +..++|++.+.||+|+||.||++++.  ++.||||+++.... .......+.+|+.+++++ +||||+++++++.....+
T Consensus         6 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~   85 (345)
T 3a8x_A            6 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRL   85 (345)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred             CchhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEE
Confidence            44578999999999999999999985  67899999987654 344567788999999988 899999999999999999


Q ss_pred             eeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceeccc-C
Q 008656          365 CIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ-S  443 (558)
Q Consensus       365 ~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~-~  443 (558)
                      |+||||++||+|.+++.+ .+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.... .
T Consensus        86 ~lv~e~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~  164 (345)
T 3a8x_A           86 FFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG  164 (345)
T ss_dssp             EEEECCCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT
T ss_pred             EEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccCCC
Confidence            999999999999999976 46799999999999999999999999999999999999999999999999999986433 3


Q ss_pred             CccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCC---------CHHHHHHHHHhcCCCCCCCCCC
Q 008656          444 GVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYL---------TPLQAAVGVVQKGLRPTIPKNS  514 (558)
Q Consensus       444 ~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~---------~~~~~~~~v~~~~~r~~ip~~~  514 (558)
                      .......||+.|+|||++.+..|+.++|||||||++|||++|..||...         ........+...  ...+|..+
T Consensus       165 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~--~~~~p~~~  242 (345)
T 3a8x_A          165 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK--QIRIPRSL  242 (345)
T ss_dssp             CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHC--CCCCCTTS
T ss_pred             CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcC--CCCCCCCC
Confidence            3455668999999999999999999999999999999999999999752         112222222322  45678889


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCH
Q 008656          515 QPKLAELLERCWQQDPALRPDF  536 (558)
Q Consensus       515 ~~~l~~Ll~~cL~~dP~~RPs~  536 (558)
                      ++++.+||.+||+.||.+||++
T Consensus       243 s~~~~~li~~lL~~dP~~R~~~  264 (345)
T 3a8x_A          243 SVKAASVLKSFLNKDPKERLGC  264 (345)
T ss_dssp             CHHHHHHHHHHTCSSTTTSTTC
T ss_pred             CHHHHHHHHHHhcCCHhHCCCC
Confidence            9999999999999999999995


No 94 
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00  E-value=3.6e-45  Score=368.75  Aligned_cols=254  Identities=28%  Similarity=0.492  Sum_probs=216.9

Q ss_pred             eeCCCceeeeeeeeecCceEEEEEEECC---------ceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeee
Q 008656          288 EIDPKHLKFGSKVASGSYGDLYRGTYCS---------QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGAC  358 (558)
Q Consensus       288 ~i~~~~~~i~~~LG~GsfG~Vy~g~~~~---------~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~  358 (558)
                      ++..++|++.+.||+|+||.||+|++..         ..||+|+++...  ....+.+.+|+.++++++||||+++++++
T Consensus         4 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   81 (289)
T 4fvq_A            4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH--RNYSESFFEAASMMSKLSHKHLVLNYGVC   81 (289)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG--GGGHHHHHHHHHHHHTSCCTTBCCEEEEE
T ss_pred             EechhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc--HHHHHHHHHHHHHHHhCCCCCEeEEEEEE
Confidence            5677899999999999999999998743         469999987542  34457899999999999999999999999


Q ss_pred             cCCCCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCc--------EE
Q 008656          359 TKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV--------VK  430 (558)
Q Consensus       359 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~--------vk  430 (558)
                      ..++..++||||++|++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++.        +|
T Consensus        82 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~k  161 (289)
T 4fvq_A           82 VCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIK  161 (289)
T ss_dssp             CCTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEE
T ss_pred             EeCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceee
Confidence            9999999999999999999999886666999999999999999999999999999999999999998886        99


Q ss_pred             EEecCcceecccCCccccCCCCCCccchhhhcC-CCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcCCCC
Q 008656          431 VADFGVARVKAQSGVMTAETGTYRWMAPEVIEH-KPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQKGLRP  508 (558)
Q Consensus       431 L~DFG~a~~~~~~~~~~~~~gt~~y~APEv~~~-~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~~v~~~~~r~  508 (558)
                      |+|||++......   ....||+.|+|||++.+ ..++.++||||||+++|+|++ |..||.......... ...  ...
T Consensus       162 l~Dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~-~~~--~~~  235 (289)
T 4fvq_A          162 LSDPGISITVLPK---DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQ-FYE--DRH  235 (289)
T ss_dssp             ECCCCSCTTTSCH---HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH-HHH--TTC
T ss_pred             eccCcccccccCc---cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHH-Hhh--ccC
Confidence            9999998644322   23357889999999988 779999999999999999999 556666665544332 222  245


Q ss_pred             CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHH
Q 008656          509 TIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKE  549 (558)
Q Consensus       509 ~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~  549 (558)
                      .++...++++.+||.+||+.||.+|||+.++++.|+++...
T Consensus       236 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p  276 (289)
T 4fvq_A          236 QLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP  276 (289)
T ss_dssp             CCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred             CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence            56777788999999999999999999999999999987653


No 95 
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00  E-value=9.2e-45  Score=365.74  Aligned_cols=262  Identities=32%  Similarity=0.621  Sum_probs=219.8

Q ss_pred             eeeCCCceeeeeeeeecCceEEEEEEEC---Cc--eEEEEEecCCCC-ChHHHHHHHHHHHHHHhccCCCceEEEeeecC
Q 008656          287 WEIDPKHLKFGSKVASGSYGDLYRGTYC---SQ--DVAIKVLKPERI-NSDMQKEFAQEVFIMRKVRHKNVVQFIGACTK  360 (558)
Q Consensus       287 ~~i~~~~~~i~~~LG~GsfG~Vy~g~~~---~~--~VAIKvlk~~~~-~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~  360 (558)
                      ..+..++|++.+.||+|+||.||+|++.   ++  .||||+++.... .....+.+.+|+.++++++||||+++++++..
T Consensus        13 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   92 (291)
T 1u46_A           13 CLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT   92 (291)
T ss_dssp             EECCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             cccchhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcc
Confidence            3667789999999999999999999863   22  589999886543 33556789999999999999999999999987


Q ss_pred             CCCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceec
Q 008656          361 PPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVK  440 (558)
Q Consensus       361 ~~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~  440 (558)
                      +. .++||||+++++|.+++....+.+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+++..
T Consensus        93 ~~-~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~  171 (291)
T 1u46_A           93 PP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL  171 (291)
T ss_dssp             SS-CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred             CC-ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccccccccc
Confidence            64 89999999999999999887778999999999999999999999999999999999999999999999999999866


Q ss_pred             ccCCc----cccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCc
Q 008656          441 AQSGV----MTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQ  515 (558)
Q Consensus       441 ~~~~~----~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~  515 (558)
                      .....    .....+|..|+|||++.+..++.++||||||+++|+|++ |..||...+..+....+.....+...+..++
T Consensus       172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (291)
T 1u46_A          172 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCP  251 (291)
T ss_dssp             CC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCC
T ss_pred             cccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCCCcCcC
Confidence            44321    223457888999999999999999999999999999999 9999999988887777777666777788999


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHH
Q 008656          516 PKLAELLERCWQQDPALRPDFSEIIEILQQIAKE  549 (558)
Q Consensus       516 ~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~  549 (558)
                      +.+.++|.+||..||.+||++.++++.|+++...
T Consensus       252 ~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~  285 (291)
T 1u46_A          252 QDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT  285 (291)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999887543


No 96 
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00  E-value=1.8e-44  Score=370.72  Aligned_cols=262  Identities=29%  Similarity=0.551  Sum_probs=224.6

Q ss_pred             eeCCCceeeeeeeeecCceEEEEEEE------CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecC-
Q 008656          288 EIDPKHLKFGSKVASGSYGDLYRGTY------CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTK-  360 (558)
Q Consensus       288 ~i~~~~~~i~~~LG~GsfG~Vy~g~~------~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~-  360 (558)
                      .++...|+++++||+|+||.||++.+      +++.||||+++.. ........+.+|+.++++++||||+++++++.. 
T Consensus        27 ~~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  105 (318)
T 3lxp_A           27 VFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD-AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDA  105 (318)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred             eecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc-cChHHHHHHHHHHHHHHhCCCcchhhEEEEEecC
Confidence            34545569999999999999999876      4678999999865 344556789999999999999999999999876 


Q ss_pred             -CCCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCccee
Q 008656          361 -PPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV  439 (558)
Q Consensus       361 -~~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~  439 (558)
                       ...+++||||+++++|.+++..  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus       106 ~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~  183 (318)
T 3lxp_A          106 GAASLQLVMEYVPLGSLRDYLPR--HSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKA  183 (318)
T ss_dssp             TTTEEEEEECCCTTCBHHHHGGG--SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred             CCceEEEEEecccCCcHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCcccccc
Confidence             4568999999999999999965  4589999999999999999999999999999999999999999999999999987


Q ss_pred             cccCC----ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHH--------------HHHHHH
Q 008656          440 KAQSG----VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPL--------------QAAVGV  501 (558)
Q Consensus       440 ~~~~~----~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~--------------~~~~~v  501 (558)
                      .....    ......+|..|+|||++.+..++.++||||||+++|+|++|..||......              ......
T Consensus       184 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (318)
T 3lxp_A          184 VPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTEL  263 (318)
T ss_dssp             CCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHH
T ss_pred             ccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHH
Confidence            65432    223446788899999999999999999999999999999999999653221              123344


Q ss_pred             HhcCCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHh
Q 008656          502 VQKGLRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKEVYS  552 (558)
Q Consensus       502 ~~~~~r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~~~  552 (558)
                      +..+.+...+..+++.+.+||.+||+.||.+||++.++++.|+++.+....
T Consensus       264 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~  314 (318)
T 3lxp_A          264 LERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQG  314 (318)
T ss_dssp             HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC
T ss_pred             HhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhcc
Confidence            556667788889999999999999999999999999999999999887754


No 97 
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00  E-value=1.5e-44  Score=364.08  Aligned_cols=254  Identities=25%  Similarity=0.412  Sum_probs=204.5

Q ss_pred             eeeCCCceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCc
Q 008656          287 WEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSL  364 (558)
Q Consensus       287 ~~i~~~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~  364 (558)
                      |++..++|++.++||+|+||.||++.+  +++.||||+++...........+.++...++.++||||+++++++..++..
T Consensus         2 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~   81 (290)
T 3fme_A            2 MEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDV   81 (290)
T ss_dssp             CCCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSE
T ss_pred             CcccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCE
Confidence            467788999999999999999999998  678899999987644444445566666678899999999999999999999


Q ss_pred             eeEEEecCCCCHHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCcEEeCCCCcEEEEecCcceec
Q 008656          365 CIVTEFMSGGSVYDYLHK---LKGVFKLPSLLKVAIDVSKGMNYLHQN-NIIHRDLKAANLLMDENEVVKVADFGVARVK  440 (558)
Q Consensus       365 ~lV~E~~~ggsL~~~l~~---~~~~l~~~~~~~i~~qI~~aL~yLH~~-gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~  440 (558)
                      |+||||++ ++|.+++..   ....+++..++.++.||+.||.|||++ ||+||||||+||+++.++.+||+|||+++..
T Consensus        82 ~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  160 (290)
T 3fme_A           82 WICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL  160 (290)
T ss_dssp             EEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred             EEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence            99999996 599888754   245799999999999999999999998 9999999999999999999999999999876


Q ss_pred             ccCCccccCCCCCCccchhhh----cCCCCCchHHHHHHHHHHHHHHcCCCCCCCC-CHHHHHHHHHhcCCCCCCCCCCc
Q 008656          441 AQSGVMTAETGTYRWMAPEVI----EHKPYDHKADVFSFGIVLWELLTGKLPYEYL-TPLQAAVGVVQKGLRPTIPKNSQ  515 (558)
Q Consensus       441 ~~~~~~~~~~gt~~y~APEv~----~~~~~s~ksDVwSlGilL~elltG~~Pf~~~-~~~~~~~~v~~~~~r~~ip~~~~  515 (558)
                      ..........||+.|+|||++    .+..++.++||||||+++|+|++|..||... .+................+..++
T Consensus       161 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (290)
T 3fme_A          161 VDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFS  240 (290)
T ss_dssp             ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTTSC
T ss_pred             cccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcccccCC
Confidence            655555556799999999996    5678999999999999999999999999874 45555555555554444556789


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          516 PKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       516 ~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                      +.+.+||.+||+.||.+|||+.++++
T Consensus       241 ~~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          241 AEFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHHhhcChhhCcCHHHHHh
Confidence            99999999999999999999999986


No 98 
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00  E-value=1.9e-44  Score=365.41  Aligned_cols=258  Identities=31%  Similarity=0.563  Sum_probs=219.9

Q ss_pred             CceeeeeeeeecCceEEEEEEECC-----ceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeee-cCCCCce
Q 008656          292 KHLKFGSKVASGSYGDLYRGTYCS-----QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGAC-TKPPSLC  365 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~~~-----~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~-~~~~~~~  365 (558)
                      .+|++.++||+|+||.||+|++.+     ..||+|.++.. ........+.+|+.++++++||||+++++++ ..++..+
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  103 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL  103 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC-CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccC-CCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence            468899999999999999998643     24899998753 2445567899999999999999999999985 5566789


Q ss_pred             eEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccCC-
Q 008656          366 IVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSG-  444 (558)
Q Consensus       366 lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~-  444 (558)
                      +||||++|++|.+++......+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+++...... 
T Consensus       104 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~  183 (298)
T 3f66_A          104 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY  183 (298)
T ss_dssp             EEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGG
T ss_pred             EEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccccch
Confidence            9999999999999998766779999999999999999999999999999999999999999999999999997554322 


Q ss_pred             ----ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHH
Q 008656          445 ----VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLA  519 (558)
Q Consensus       445 ----~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~  519 (558)
                          ......||+.|+|||++.+..++.++||||||+++|+|++ |.+||...+..+.... ...+.+...+..+++.+.
T Consensus       184 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~  262 (298)
T 3f66_A          184 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY-LLQGRRLLQPEYCPDPLY  262 (298)
T ss_dssp             CBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHH-HHTTCCCCCCTTCCHHHH
T ss_pred             hccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHH-HhcCCCCCCCccCCHHHH
Confidence                2234457789999999999999999999999999999999 6777877665554444 334556667888999999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHH
Q 008656          520 ELLERCWQQDPALRPDFSEIIEILQQIAKEVY  551 (558)
Q Consensus       520 ~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~~  551 (558)
                      +++.+||..||.+||++.++++.|+++..++.
T Consensus       263 ~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~  294 (298)
T 3f66_A          263 EVMLKCWHPKAEMRPSFSELVSRISAIFSTFI  294 (298)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence            99999999999999999999999999987653


No 99 
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00  E-value=2.2e-44  Score=378.03  Aligned_cols=249  Identities=28%  Similarity=0.444  Sum_probs=201.9

Q ss_pred             eCCCceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCcee
Q 008656          289 IDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCI  366 (558)
Q Consensus       289 i~~~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~l  366 (558)
                      .+.++|++.++||+|+||.||+++.  +++.||||++......   ...+.+|+.+++.++||||+++++++..+..+|+
T Consensus        17 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l   93 (361)
T 3uc3_A           17 HDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI---DENVQREIINHRSLRHPNIVRFKEVILTPTHLAI   93 (361)
T ss_dssp             CCTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS---CHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             CCCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc---cHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEE
Confidence            4567899999999999999999998  4788999999865332   2567899999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCc--EEEEecCcceecccCC
Q 008656          367 VTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV--VKVADFGVARVKAQSG  444 (558)
Q Consensus       367 V~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~--vkL~DFG~a~~~~~~~  444 (558)
                      ||||++||+|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++.  +||+|||+++......
T Consensus        94 v~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~  172 (361)
T 3uc3_A           94 IMEYASGGELYERICN-AGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS  172 (361)
T ss_dssp             EEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC-------
T ss_pred             EEEeCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccC
Confidence            9999999999999976 567999999999999999999999999999999999999987765  9999999998655555


Q ss_pred             ccccCCCCCCccchhhhcCCCCCch-HHHHHHHHHHHHHHcCCCCCCCCCH----HHHHHHHHhcCCCCCCCCCCcHHHH
Q 008656          445 VMTAETGTYRWMAPEVIEHKPYDHK-ADVFSFGIVLWELLTGKLPYEYLTP----LQAAVGVVQKGLRPTIPKNSQPKLA  519 (558)
Q Consensus       445 ~~~~~~gt~~y~APEv~~~~~~s~k-sDVwSlGilL~elltG~~Pf~~~~~----~~~~~~v~~~~~r~~ip~~~~~~l~  519 (558)
                      ......||+.|+|||++.+..++.+ +|||||||++|+|++|+.||.....    ......+............+++.+.
T Consensus       173 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  252 (361)
T 3uc3_A          173 QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECC  252 (361)
T ss_dssp             --------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHH
T ss_pred             CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHH
Confidence            5556689999999999999888766 8999999999999999999987543    2333333333333333446899999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHH
Q 008656          520 ELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       520 ~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                      +||.+||..||.+|||+.|+++
T Consensus       253 ~li~~~L~~dP~~Rps~~ell~  274 (361)
T 3uc3_A          253 HLISRIFVADPATRISIPEIKT  274 (361)
T ss_dssp             HHHHHHSCSCTTTSCCHHHHHT
T ss_pred             HHHHHHccCChhHCcCHHHHHh
Confidence            9999999999999999999985


No 100
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00  E-value=1.3e-44  Score=379.25  Aligned_cols=251  Identities=24%  Similarity=0.397  Sum_probs=218.4

Q ss_pred             eeCCCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCC-ChHHHHHHHHHHHHHHhc-cCCCceEEEeeecCCCC
Q 008656          288 EIDPKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERI-NSDMQKEFAQEVFIMRKV-RHKNVVQFIGACTKPPS  363 (558)
Q Consensus       288 ~i~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~-~~~~~~~~~~Ev~iL~~l-~HpnIv~l~g~~~~~~~  363 (558)
                      .+..++|++.+.||+|+||.||++++.  ++.||||+++.... .......+..|..+++.+ +||||+++++++.....
T Consensus        16 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~   95 (353)
T 2i0e_A           16 RMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR   95 (353)
T ss_dssp             ---CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSE
T ss_pred             CCchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCE
Confidence            456678999999999999999999986  46799999975422 122346688899999988 79999999999999999


Q ss_pred             ceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccC
Q 008656          364 LCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQS  443 (558)
Q Consensus       364 ~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~  443 (558)
                      +|+||||++||+|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus        96 ~~lv~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~  174 (353)
T 2i0e_A           96 LYFVMEYVNGGDLMYHIQQ-VGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD  174 (353)
T ss_dssp             EEEEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred             EEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccC
Confidence            9999999999999999976 467999999999999999999999999999999999999999999999999999864332


Q ss_pred             -CccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHH
Q 008656          444 -GVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELL  522 (558)
Q Consensus       444 -~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~~Ll  522 (558)
                       .......||+.|+|||++.+..|+.++|||||||++|||++|..||...+..+....+....  ..+|..+++++.+||
T Consensus       175 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~--~~~p~~~s~~~~~li  252 (353)
T 2i0e_A          175 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN--VAYPKSMSKEAVAIC  252 (353)
T ss_dssp             TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--CCCCTTSCHHHHHHH
T ss_pred             CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC--CCCCCCCCHHHHHHH
Confidence             34456689999999999999999999999999999999999999999988887777766543  457788999999999


Q ss_pred             HHhhhcCCCCCCC-----HHHHHH
Q 008656          523 ERCWQQDPALRPD-----FSEIIE  541 (558)
Q Consensus       523 ~~cL~~dP~~RPs-----~~ell~  541 (558)
                      .+||..||.+||+     +.++++
T Consensus       253 ~~lL~~dP~~R~~~~~~~~~~i~~  276 (353)
T 2i0e_A          253 KGLMTKHPGKRLGCGPEGERDIKE  276 (353)
T ss_dssp             HHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred             HHHhhcCHHHcCCCCCCCHHHHhc
Confidence            9999999999995     466653


No 101
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00  E-value=6.8e-45  Score=380.32  Aligned_cols=250  Identities=24%  Similarity=0.424  Sum_probs=217.8

Q ss_pred             eeCCCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCC-ChHHHHHHHHHHHHHHhc-cCCCceEEEeeecCCCC
Q 008656          288 EIDPKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERI-NSDMQKEFAQEVFIMRKV-RHKNVVQFIGACTKPPS  363 (558)
Q Consensus       288 ~i~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~-~~~~~~~~~~Ev~iL~~l-~HpnIv~l~g~~~~~~~  363 (558)
                      .+..++|++.+.||+|+||.||++++.  ++.||||+++.... .......+..|..+++.+ +||||+++++++.....
T Consensus        13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~   92 (345)
T 1xjd_A           13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN   92 (345)
T ss_dssp             ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred             CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence            456688999999999999999999984  67899999975421 112345678899999887 89999999999999999


Q ss_pred             ceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceeccc-
Q 008656          364 LCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ-  442 (558)
Q Consensus       364 ~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~-  442 (558)
                      +|+||||++||+|.+++.. .+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.... 
T Consensus        93 ~~lv~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~  171 (345)
T 1xjd_A           93 LFFVMEYLNGGDLMYHIQS-CHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG  171 (345)
T ss_dssp             EEEEEECCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred             EEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccC
Confidence            9999999999999999976 46799999999999999999999999999999999999999999999999999976433 


Q ss_pred             CCccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHH
Q 008656          443 SGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELL  522 (558)
Q Consensus       443 ~~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~~Ll  522 (558)
                      ........||+.|+|||++.+..|+.++|||||||++|||++|..||...+..+....+...  .+.+|..+++++.+||
T Consensus       172 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~li  249 (345)
T 1xjd_A          172 DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD--NPFYPRWLEKEAKDLL  249 (345)
T ss_dssp             TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCCCTTSCHHHHHHH
T ss_pred             CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhC--CCCCCcccCHHHHHHH
Confidence            23445668999999999999999999999999999999999999999998887766665543  3567888999999999


Q ss_pred             HHhhhcCCCCCCCHH-HHH
Q 008656          523 ERCWQQDPALRPDFS-EII  540 (558)
Q Consensus       523 ~~cL~~dP~~RPs~~-ell  540 (558)
                      .+||..||.+||++. +++
T Consensus       250 ~~lL~~dp~~R~~~~~~i~  268 (345)
T 1xjd_A          250 VKLFVREPEKRLGVRGDIR  268 (345)
T ss_dssp             HHHSCSSGGGSBTTBSCGG
T ss_pred             HHHhcCCHhHcCCChHHHH
Confidence            999999999999987 654


No 102
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00  E-value=1.3e-44  Score=366.52  Aligned_cols=250  Identities=31%  Similarity=0.600  Sum_probs=206.8

Q ss_pred             CCCceeeeeeeeecCceEEEEEEECCceEEEEEecCCCCChHHHHHHHHHHHHHHh--ccCCCceEEEeeecC----CCC
Q 008656          290 DPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRK--VRHKNVVQFIGACTK----PPS  363 (558)
Q Consensus       290 ~~~~~~i~~~LG~GsfG~Vy~g~~~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~--l~HpnIv~l~g~~~~----~~~  363 (558)
                      -.++|++.++||+|+||.||+|++.++.||||++...     ....+.+|..++..  ++||||+++++++..    ...
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~   80 (301)
T 3q4u_A            6 VARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSR-----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQ   80 (301)
T ss_dssp             CGGGCEEEEEEEECSSEEEEEEEETTEEEEEEEECGG-----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEE
T ss_pred             ccCcEEEEEeeccCCCcEEEEEEECCEEEEEEEeccc-----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCce
Confidence            3468999999999999999999999999999998753     23556667777776  789999999998543    455


Q ss_pred             ceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH--------HCCceeccCCCCcEEeCCCCcEEEEecC
Q 008656          364 LCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH--------QNNIIHRDLKAANLLMDENEVVKVADFG  435 (558)
Q Consensus       364 ~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH--------~~gIiHrDLKp~NILl~~~~~vkL~DFG  435 (558)
                      +|+||||+++|+|.++++.  ..+++..++.++.||+.||.|||        ++||+||||||+|||++.++.+||+|||
T Consensus        81 ~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg  158 (301)
T 3q4u_A           81 LWLITHYHEMGSLYDYLQL--TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLG  158 (301)
T ss_dssp             EEEEECCCTTCBHHHHHTT--CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCT
T ss_pred             eEEehhhccCCCHHHHHhh--cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCC
Confidence            8999999999999999954  57999999999999999999999        9999999999999999999999999999


Q ss_pred             cceecccCCc-----cccCCCCCCccchhhhcCC------CCCchHHHHHHHHHHHHHHcC----------CCCCCCCCH
Q 008656          436 VARVKAQSGV-----MTAETGTYRWMAPEVIEHK------PYDHKADVFSFGIVLWELLTG----------KLPYEYLTP  494 (558)
Q Consensus       436 ~a~~~~~~~~-----~~~~~gt~~y~APEv~~~~------~~s~ksDVwSlGilL~elltG----------~~Pf~~~~~  494 (558)
                      +++.......     .....||+.|+|||++.+.      .++.++||||||+++|||++|          ..||....+
T Consensus       159 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~  238 (301)
T 3q4u_A          159 LAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVP  238 (301)
T ss_dssp             TCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSC
T ss_pred             CeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCC
Confidence            9976544322     2234799999999999877      456799999999999999999          888865322


Q ss_pred             ----HHHHHH-HHhcCCCCCCCC-----CCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHH
Q 008656          495 ----LQAAVG-VVQKGLRPTIPK-----NSQPKLAELLERCWQQDPALRPDFSEIIEILQQI  546 (558)
Q Consensus       495 ----~~~~~~-v~~~~~r~~ip~-----~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l  546 (558)
                          ...... ......++.++.     .+++.+.+||.+||+.||.+|||+.++++.|+++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          239 NDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             SSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence                222222 223334444443     2567899999999999999999999999999876


No 103
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00  E-value=1.8e-44  Score=406.08  Aligned_cols=264  Identities=29%  Similarity=0.550  Sum_probs=227.9

Q ss_pred             CceeeCCCceeeee-eeeecCceEEEEEEEC----CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeec
Q 008656          285 DVWEIDPKHLKFGS-KVASGSYGDLYRGTYC----SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACT  359 (558)
Q Consensus       285 ~~~~i~~~~~~i~~-~LG~GsfG~Vy~g~~~----~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~  359 (558)
                      ..|.++...+.+.. +||+|+||.||+|.+.    ++.||||+++.........+.+.+|+.+|++++|||||++++++.
T Consensus       361 ~~~~~~~~~~~l~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~  440 (635)
T 4fl3_A          361 KEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE  440 (635)
T ss_dssp             SSSBCCGGGEEEEEEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             ccccccchhccccCCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence            35667777777654 8999999999999762    467999999877656666788999999999999999999999997


Q ss_pred             CCCCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCccee
Q 008656          360 KPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV  439 (558)
Q Consensus       360 ~~~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~  439 (558)
                      . +..+|||||++||+|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus       441 ~-~~~~lv~E~~~~g~L~~~l~~-~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~  518 (635)
T 4fl3_A          441 A-ESWMLVMEMAELGPLNKYLQQ-NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKA  518 (635)
T ss_dssp             S-SSEEEEEECCTTEEHHHHHHH-CTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHH
T ss_pred             c-CCEEEEEEccCCCCHHHHHhh-CCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccc
Confidence            5 458999999999999999976 56799999999999999999999999999999999999999999999999999976


Q ss_pred             cccCC----ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCC
Q 008656          440 KAQSG----VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQKGLRPTIPKNS  514 (558)
Q Consensus       440 ~~~~~----~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~  514 (558)
                      .....    ..+...+|+.|+|||++.+..|+.++|||||||++|||++ |+.||.+.+..+... .+..+.++..|..+
T Consensus       519 ~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~-~i~~~~~~~~p~~~  597 (635)
T 4fl3_A          519 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA-MLEKGERMGCPAGC  597 (635)
T ss_dssp             TTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHH-HHHTTCCCCCCTTC
T ss_pred             cccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-HHHcCCCCCCCCCC
Confidence            54332    2233456789999999999999999999999999999998 999999988876554 45567778889999


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHH
Q 008656          515 QPKLAELLERCWQQDPALRPDFSEIIEILQQIAKEVY  551 (558)
Q Consensus       515 ~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~~  551 (558)
                      ++++.+||.+||..||.+||++.++++.|+++..++.
T Consensus       598 ~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l~  634 (635)
T 4fl3_A          598 PREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV  634 (635)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999988764


No 104
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00  E-value=1.3e-44  Score=372.51  Aligned_cols=261  Identities=32%  Similarity=0.601  Sum_probs=223.6

Q ss_pred             eeCCCceeeeeeeeecCceEEEEEEEC--Cce--EEEEEecCCCCChHHHHHHHHHHHHHHhc-cCCCceEEEeeecCCC
Q 008656          288 EIDPKHLKFGSKVASGSYGDLYRGTYC--SQD--VAIKVLKPERINSDMQKEFAQEVFIMRKV-RHKNVVQFIGACTKPP  362 (558)
Q Consensus       288 ~i~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~--VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l-~HpnIv~l~g~~~~~~  362 (558)
                      .++.++|++.+.||+|+||.||++++.  +..  +++|.++... .......+.+|+.+++++ +||||+++++++...+
T Consensus        21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~   99 (327)
T 1fvr_A           21 VLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG   99 (327)
T ss_dssp             BCCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT
T ss_pred             cccHHHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc-chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCC
Confidence            356689999999999999999999874  444  4999887532 333456789999999999 8999999999999999


Q ss_pred             CceeEEEecCCCCHHHHHHhhc---------------cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCC
Q 008656          363 SLCIVTEFMSGGSVYDYLHKLK---------------GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENE  427 (558)
Q Consensus       363 ~~~lV~E~~~ggsL~~~l~~~~---------------~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~  427 (558)
                      ..|+||||++|++|.+++....               ..+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus       100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~  179 (327)
T 1fvr_A          100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY  179 (327)
T ss_dssp             EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGG
T ss_pred             ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCC
Confidence            9999999999999999997643               3689999999999999999999999999999999999999999


Q ss_pred             cEEEEecCcceecccCCccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcCC
Q 008656          428 VVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQKGL  506 (558)
Q Consensus       428 ~vkL~DFG~a~~~~~~~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~~v~~~~~  506 (558)
                      .+||+|||+++............+++.|+|||++.+..++.++||||||+++|+|++ |..||...+..+.... +..+.
T Consensus       180 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~-~~~~~  258 (327)
T 1fvr_A          180 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK-LPQGY  258 (327)
T ss_dssp             CEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH-GGGTC
T ss_pred             eEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHH-hhcCC
Confidence            999999999975444334445567889999999999999999999999999999998 9999999887765544 44566


Q ss_pred             CCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHH
Q 008656          507 RPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKEV  550 (558)
Q Consensus       507 r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~  550 (558)
                      ++..+..+++.+.+||.+||..||.+||++.++++.|+++..+.
T Consensus       259 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  302 (327)
T 1fvr_A          259 RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER  302 (327)
T ss_dssp             CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred             CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence            67788899999999999999999999999999999999998754


No 105
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00  E-value=1.1e-44  Score=384.31  Aligned_cols=254  Identities=23%  Similarity=0.405  Sum_probs=217.9

Q ss_pred             ceeeCCCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCC-ChHHHHHHHHHHHHHHhccCCCceEEEeeecCCC
Q 008656          286 VWEIDPKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERI-NSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPP  362 (558)
Q Consensus       286 ~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~-~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~  362 (558)
                      .+.+..++|++.+.||+|+||.||++.+.  ++.||+|+++.... .......+.+|+.+|+.++||||+++++++....
T Consensus         9 ~~~v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~   88 (384)
T 4fr4_A            9 NEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEE   88 (384)
T ss_dssp             CCCCCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred             CCCCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC
Confidence            34667789999999999999999999984  57799999875421 1223467889999999999999999999999999


Q ss_pred             CceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceeccc
Q 008656          363 SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ  442 (558)
Q Consensus       363 ~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~  442 (558)
                      .+|+||||+.||+|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++....
T Consensus        89 ~~~lv~e~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~  167 (384)
T 4fr4_A           89 DMFMVVDLLLGGDLRYHLQQ-NVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR  167 (384)
T ss_dssp             EEEEEECCCTTEEHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             EEEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence            99999999999999999976 56799999999999999999999999999999999999999999999999999987766


Q ss_pred             CCccccCCCCCCccchhhhcC---CCCCchHHHHHHHHHHHHHHcCCCCCCCCCH--HHHHHHHHhcCCCCCCCCCCcHH
Q 008656          443 SGVMTAETGTYRWMAPEVIEH---KPYDHKADVFSFGIVLWELLTGKLPYEYLTP--LQAAVGVVQKGLRPTIPKNSQPK  517 (558)
Q Consensus       443 ~~~~~~~~gt~~y~APEv~~~---~~~s~ksDVwSlGilL~elltG~~Pf~~~~~--~~~~~~v~~~~~r~~ip~~~~~~  517 (558)
                      ........||+.|+|||++.+   ..|+.++|||||||++|+|++|..||.....  ......... .....+|..+++.
T Consensus       168 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~-~~~~~~p~~~s~~  246 (384)
T 4fr4_A          168 ETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFE-TTVVTYPSAWSQE  246 (384)
T ss_dssp             TCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHH-HCCCCCCTTSCHH
T ss_pred             CCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHh-hcccCCCCcCCHH
Confidence            666677889999999999964   5689999999999999999999999975332  222222222 2345677889999


Q ss_pred             HHHHHHHhhhcCCCCCCC-HHHHHH
Q 008656          518 LAELLERCWQQDPALRPD-FSEIIE  541 (558)
Q Consensus       518 l~~Ll~~cL~~dP~~RPs-~~ell~  541 (558)
                      +.+||.+||+.||.+||+ +.++++
T Consensus       247 ~~~li~~lL~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          247 MVSLLKKLLEPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             HHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred             HHHHHHHHhcCCHhHhcccHHHHHc
Confidence            999999999999999998 776653


No 106
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00  E-value=9.9e-45  Score=383.06  Aligned_cols=247  Identities=26%  Similarity=0.430  Sum_probs=209.9

Q ss_pred             eCCCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCC-hHHHHHHHHHHHH-HHhccCCCceEEEeeecCCCCc
Q 008656          289 IDPKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERIN-SDMQKEFAQEVFI-MRKVRHKNVVQFIGACTKPPSL  364 (558)
Q Consensus       289 i~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~-~~~~~~~~~Ev~i-L~~l~HpnIv~l~g~~~~~~~~  364 (558)
                      +..++|++.+.||+|+||.||++++.  ++.||||+++..... ......+.+|..+ ++.++||||+++++++.....+
T Consensus        35 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~  114 (373)
T 2r5t_A           35 AKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKL  114 (373)
T ss_dssp             CCGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEE
T ss_pred             CChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEE
Confidence            45578999999999999999999985  567999999865432 2334566777776 5778999999999999999999


Q ss_pred             eeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceeccc-C
Q 008656          365 CIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ-S  443 (558)
Q Consensus       365 ~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~-~  443 (558)
                      |+||||++||+|.+++.+ .+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.... .
T Consensus       115 ~lv~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~  193 (373)
T 2r5t_A          115 YFVLDYINGGELFYHLQR-ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN  193 (373)
T ss_dssp             EEEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC
T ss_pred             EEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccccccccCC
Confidence            999999999999999976 56789999999999999999999999999999999999999999999999999976433 3


Q ss_pred             CccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHH
Q 008656          444 GVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELLE  523 (558)
Q Consensus       444 ~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~~Ll~  523 (558)
                      .......||+.|+|||++.+..|+.++|||||||++|||++|..||...+..+....+....  ..++..+++.+.+||.
T Consensus       194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~li~  271 (373)
T 2r5t_A          194 STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKP--LQLKPNITNSARHLLE  271 (373)
T ss_dssp             CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSC--CCCCSSSCHHHHHHHH
T ss_pred             CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcc--cCCCCCCCHHHHHHHH
Confidence            34556689999999999999999999999999999999999999999988888777776653  3467789999999999


Q ss_pred             HhhhcCCCCCCCHHH
Q 008656          524 RCWQQDPALRPDFSE  538 (558)
Q Consensus       524 ~cL~~dP~~RPs~~e  538 (558)
                      +||+.||.+||++.+
T Consensus       272 ~lL~~dp~~R~~~~~  286 (373)
T 2r5t_A          272 GLLQKDRTKRLGAKD  286 (373)
T ss_dssp             HHTCSSGGGSTTTTT
T ss_pred             HHcccCHHhCCCCCC
Confidence            999999999999753


No 107
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00  E-value=1.4e-44  Score=373.14  Aligned_cols=256  Identities=21%  Similarity=0.310  Sum_probs=216.2

Q ss_pred             CCCceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCChHHHHHHHHHHHHHHhc-cCCCceEEEeeecCCCCcee
Q 008656          290 DPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKV-RHKNVVQFIGACTKPPSLCI  366 (558)
Q Consensus       290 ~~~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l-~HpnIv~l~g~~~~~~~~~l  366 (558)
                      -.++|++.+.||+|+||.||+|+.  +++.||||++......    ..+.+|+.+++++ +||||+++++++......++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l   82 (330)
T 2izr_A            7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA----PQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAM   82 (330)
T ss_dssp             ETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSS----CCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEE
T ss_pred             EcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccch----HHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEE
Confidence            347899999999999999999996  5788999998755322    3578899999999 89999999999999999999


Q ss_pred             EEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCc-----EEEEecCcceecc
Q 008656          367 VTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV-----VKVADFGVARVKA  441 (558)
Q Consensus       367 V~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~-----vkL~DFG~a~~~~  441 (558)
                      ||||+ |++|.+++....+.+++..++.++.||+.||.|||++||+||||||+|||++.++.     +||+|||+++...
T Consensus        83 v~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~  161 (330)
T 2izr_A           83 VLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI  161 (330)
T ss_dssp             EEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred             EEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence            99999 99999999876678999999999999999999999999999999999999998887     9999999998654


Q ss_pred             cCCc--------cccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCH---HHHHHHHHhcCCCC--
Q 008656          442 QSGV--------MTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTP---LQAAVGVVQKGLRP--  508 (558)
Q Consensus       442 ~~~~--------~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~---~~~~~~v~~~~~r~--  508 (558)
                      ....        .....||+.|+|||++.+..++.++|||||||++|||++|..||...+.   .+....+.......  
T Consensus       162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~  241 (330)
T 2izr_A          162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPI  241 (330)
T ss_dssp             CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCH
T ss_pred             cCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCH
Confidence            4321        2456799999999999999999999999999999999999999987532   22222222211111  


Q ss_pred             -CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHH
Q 008656          509 -TIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKEVY  551 (558)
Q Consensus       509 -~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~~  551 (558)
                       .....++ ++.+++.+||..||.+||++.+|++.|+++.+...
T Consensus       242 ~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~  284 (330)
T 2izr_A          242 EVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKG  284 (330)
T ss_dssp             HHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             HHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcC
Confidence             1123355 99999999999999999999999999999987653


No 108
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00  E-value=2.1e-44  Score=372.51  Aligned_cols=261  Identities=30%  Similarity=0.600  Sum_probs=219.9

Q ss_pred             eeCCCceeeeeeeeecCceEEEEEEEC--Cce----EEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCC
Q 008656          288 EIDPKHLKFGSKVASGSYGDLYRGTYC--SQD----VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKP  361 (558)
Q Consensus       288 ~i~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~----VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~  361 (558)
                      .+...+|++.++||+|+||.||+|.+.  ++.    |++|.++... .......+.+|+.++++++||||+++++++..+
T Consensus        11 ~l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~   89 (327)
T 3lzb_A           11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTS   89 (327)
T ss_dssp             ECCTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS-SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS
T ss_pred             ccCHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc-CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC
Confidence            456789999999999999999999984  444    5777766432 233457899999999999999999999999875


Q ss_pred             CCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecc
Q 008656          362 PSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKA  441 (558)
Q Consensus       362 ~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~  441 (558)
                      . .++|+||+.+|+|.+++....+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus        90 ~-~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~  168 (327)
T 3lzb_A           90 T-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG  168 (327)
T ss_dssp             S-EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC-----
T ss_pred             C-ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEcc
Confidence            4 889999999999999998877889999999999999999999999999999999999999999999999999998654


Q ss_pred             cCC---ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHH
Q 008656          442 QSG---VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPK  517 (558)
Q Consensus       442 ~~~---~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~  517 (558)
                      ...   ......+|+.|+|||++.+..|+.++||||||+++|+|++ |..||......+.. ..+..+.+...+..++++
T Consensus       169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  247 (327)
T 3lzb_A          169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQPPICTID  247 (327)
T ss_dssp             -----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH-HHHHTTCCCCCCTTBCHH
T ss_pred             CccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH-HHHHcCCCCCCCccCCHH
Confidence            332   2233456889999999999999999999999999999999 99999988766544 345556677788899999


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHH
Q 008656          518 LAELLERCWQQDPALRPDFSEIIEILQQIAKEVY  551 (558)
Q Consensus       518 l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~~  551 (558)
                      +.++|.+||..||.+||++.++++.|+++...-.
T Consensus       248 l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~  281 (327)
T 3lzb_A          248 VYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQ  281 (327)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSHH
T ss_pred             HHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCcC
Confidence            9999999999999999999999999999986543


No 109
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00  E-value=1.7e-44  Score=373.46  Aligned_cols=256  Identities=27%  Similarity=0.437  Sum_probs=215.0

Q ss_pred             CCceeeCCCceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCChHHHHHHHHHHHH-HHhccCCCceEEEeeecC
Q 008656          284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI-MRKVRHKNVVQFIGACTK  360 (558)
Q Consensus       284 ~~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~~~~~~~~~Ev~i-L~~l~HpnIv~l~g~~~~  360 (558)
                      ...|++..++|++.+.||+|+||.||+|++  +++.||||+++....... ...+..|+.+ ++.++||||+++++++..
T Consensus        43 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~e~~~~~~~~~h~~iv~~~~~~~~  121 (340)
T 3an0_A           43 NQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQE-QKRLLMDLDISMRTVDCPFTVTFYGALFR  121 (340)
T ss_dssp             -CCCCCCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHH-HHHHHHHHHHHHTTCCCTTTCCEEEEEEC
T ss_pred             CcceEEehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHH-HHHHHHHHHHHHhhcCCCcEEEEeeEEEe
Confidence            345788889999999999999999999998  678899999987654443 3455555555 788999999999999999


Q ss_pred             CCCceeEEEecCCCCHHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCcEEeCCCCcEEEEecCc
Q 008656          361 PPSLCIVTEFMSGGSVYDYLHK---LKGVFKLPSLLKVAIDVSKGMNYLHQN-NIIHRDLKAANLLMDENEVVKVADFGV  436 (558)
Q Consensus       361 ~~~~~lV~E~~~ggsL~~~l~~---~~~~l~~~~~~~i~~qI~~aL~yLH~~-gIiHrDLKp~NILl~~~~~vkL~DFG~  436 (558)
                      ++.+|+||||++| +|.+++..   ....+++..++.++.||+.||.|||++ ||+||||||+|||++.++.+||+|||+
T Consensus       122 ~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~  200 (340)
T 3an0_A          122 EGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGI  200 (340)
T ss_dssp             SSCEEEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCSCCSTTEEECSTTCEEECCCSH
T ss_pred             CCcEEEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeCCC
Confidence            9999999999965 99998864   346799999999999999999999987 999999999999999999999999999


Q ss_pred             ceecccCCccccCCCCCCccchhhhc----CCCCCchHHHHHHHHHHHHHHcCCCCCCCC-CHHHHHHHHHhcCCCCCCC
Q 008656          437 ARVKAQSGVMTAETGTYRWMAPEVIE----HKPYDHKADVFSFGIVLWELLTGKLPYEYL-TPLQAAVGVVQKGLRPTIP  511 (558)
Q Consensus       437 a~~~~~~~~~~~~~gt~~y~APEv~~----~~~~s~ksDVwSlGilL~elltG~~Pf~~~-~~~~~~~~v~~~~~r~~ip  511 (558)
                      ++............||+.|+|||++.    ...++.++|||||||++|+|++|+.||... .+.+..............+
T Consensus       201 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~  280 (340)
T 3an0_A          201 SGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPA  280 (340)
T ss_dssp             HHHHSCHHHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCG
T ss_pred             ceecccccccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCCCCCCCc
Confidence            97665443444567999999999974    447999999999999999999999999874 4444444444443333334


Q ss_pred             CCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          512 KNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       512 ~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                      ..+++++.+||.+||..||.+||++.++++
T Consensus       281 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~  310 (340)
T 3an0_A          281 DKFSAEFVDFTSQCLKKNSKERPTYPELMQ  310 (340)
T ss_dssp             GGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             ccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence            568999999999999999999999999986


No 110
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00  E-value=1.6e-44  Score=378.03  Aligned_cols=247  Identities=25%  Similarity=0.391  Sum_probs=219.4

Q ss_pred             CCCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCC-ChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCcee
Q 008656          290 DPKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERI-NSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCI  366 (558)
Q Consensus       290 ~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~-~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~l  366 (558)
                      ..++|++.+.||+|+||.||++++.  ++.||||+++.... .......+.+|+.+++.++||||+++++++.....+|+
T Consensus        39 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l  118 (350)
T 1rdq_E           39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM  118 (350)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             CHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEE
Confidence            3468999999999999999999984  78899999875422 11234678899999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccCCcc
Q 008656          367 VTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVM  446 (558)
Q Consensus       367 V~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~  446 (558)
                      ||||++||+|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++.....  .
T Consensus       119 v~e~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~--~  195 (350)
T 1rdq_E          119 VMEYVAGGEMFSHLRR-IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--T  195 (350)
T ss_dssp             EEECCTTCBHHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC--B
T ss_pred             EEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccCC--c
Confidence            9999999999999986 467999999999999999999999999999999999999999999999999999865432  3


Q ss_pred             ccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhh
Q 008656          447 TAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELLERCW  526 (558)
Q Consensus       447 ~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~~Ll~~cL  526 (558)
                      ....||+.|+|||++.+..|+.++|||||||++|+|++|..||...+..+....+...  ...+|..+++++.+||.+||
T Consensus       196 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~--~~~~p~~~~~~~~~li~~lL  273 (350)
T 1rdq_E          196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG--KVRFPSHFSSDLKDLLRNLL  273 (350)
T ss_dssp             CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCCCTTCCHHHHHHHHHHS
T ss_pred             ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHh
Confidence            4567999999999999999999999999999999999999999998888777666654  34577889999999999999


Q ss_pred             hcCCCCCCC-----HHHHHH
Q 008656          527 QQDPALRPD-----FSEIIE  541 (558)
Q Consensus       527 ~~dP~~RPs-----~~ell~  541 (558)
                      +.||.+||+     +.++++
T Consensus       274 ~~dp~~R~~~~~~~~~ei~~  293 (350)
T 1rdq_E          274 QVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             CSCTTTCTTSSTTTTHHHHT
T ss_pred             hcCHHhccCCccCCHHHHHh
Confidence            999999998     787764


No 111
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00  E-value=1.5e-44  Score=370.89  Aligned_cols=257  Identities=23%  Similarity=0.376  Sum_probs=214.3

Q ss_pred             eCCCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCC--Cc
Q 008656          289 IDPKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPP--SL  364 (558)
Q Consensus       289 i~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~--~~  364 (558)
                      +...+|++.++||+|+||.||+|.+.  ++.||||+++..... .....+.+|+.++++++||||+++++++....  ..
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   84 (319)
T 4euu_A            6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL-RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHK   84 (319)
T ss_dssp             CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG-SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCE
T ss_pred             CCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEecccccc-chHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceE
Confidence            44578999999999999999999986  788999999864322 22467889999999999999999999987654  77


Q ss_pred             eeEEEecCCCCHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEe----CCCCcEEEEecCcce
Q 008656          365 CIVTEFMSGGSVYDYLHKLKG--VFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM----DENEVVKVADFGVAR  438 (558)
Q Consensus       365 ~lV~E~~~ggsL~~~l~~~~~--~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl----~~~~~vkL~DFG~a~  438 (558)
                      |+||||++|++|.+++.....  .+++..++.++.||+.||.|||++||+||||||+|||+    +.++.+||+|||+++
T Consensus        85 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~  164 (319)
T 4euu_A           85 VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR  164 (319)
T ss_dssp             EEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred             EEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence            999999999999999976443  38999999999999999999999999999999999999    778889999999998


Q ss_pred             ecccCCccccCCCCCCccchhhhc--------CCCCCchHHHHHHHHHHHHHHcCCCCCCCCCH----HHHHHHHHhcCC
Q 008656          439 VKAQSGVMTAETGTYRWMAPEVIE--------HKPYDHKADVFSFGIVLWELLTGKLPYEYLTP----LQAAVGVVQKGL  506 (558)
Q Consensus       439 ~~~~~~~~~~~~gt~~y~APEv~~--------~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~----~~~~~~v~~~~~  506 (558)
                      ............||+.|+|||++.        +..++.++|||||||++|||++|..||.....    .+....+.....
T Consensus       165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p  244 (319)
T 4euu_A          165 ELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP  244 (319)
T ss_dssp             ECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCC
T ss_pred             ecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCC
Confidence            876666666778999999999986        67899999999999999999999999975432    233333332211


Q ss_pred             C-----------------------CCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHH
Q 008656          507 R-----------------------PTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQI  546 (558)
Q Consensus       507 r-----------------------~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l  546 (558)
                      .                       ..++..+++.+.+||.+||+.||.+|||+.|+++...+.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~  307 (319)
T 4euu_A          245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI  307 (319)
T ss_dssp             TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred             cccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence            0                       112234567899999999999999999999999877654


No 112
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00  E-value=3e-44  Score=381.17  Aligned_cols=248  Identities=19%  Similarity=0.369  Sum_probs=220.3

Q ss_pred             CceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeEEE
Q 008656          292 KHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTE  369 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV~E  369 (558)
                      ++|++.+.||+|+||.||+|.+.  ++.||+|++....  ......+.+|+.+|++++||||+++++++.....+|+|||
T Consensus        51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E  128 (387)
T 1kob_A           51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY--PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILE  128 (387)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEE
T ss_pred             cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc--hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEE
Confidence            57999999999999999999984  6789999997542  3345678999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCC--CCcEEEEecCcceecccCCccc
Q 008656          370 FMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDE--NEVVKVADFGVARVKAQSGVMT  447 (558)
Q Consensus       370 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~--~~~vkL~DFG~a~~~~~~~~~~  447 (558)
                      |+.|++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.  .+.+||+|||+++.........
T Consensus       129 ~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~  208 (387)
T 1kob_A          129 FLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVK  208 (387)
T ss_dssp             CCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEE
T ss_pred             cCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCCccee
Confidence            99999999999875667999999999999999999999999999999999999974  4679999999998776655556


Q ss_pred             cCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCC--CCCCCCCCcHHHHHHHHHh
Q 008656          448 AETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGL--RPTIPKNSQPKLAELLERC  525 (558)
Q Consensus       448 ~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~--r~~ip~~~~~~l~~Ll~~c  525 (558)
                      ...||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+....+.....  .+.....+++++.+||.+|
T Consensus       209 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~  288 (387)
T 1kob_A          209 VTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNL  288 (387)
T ss_dssp             EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTT
T ss_pred             eeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHH
Confidence            66899999999999999999999999999999999999999999888777666555433  2334457899999999999


Q ss_pred             hhcCCCCCCCHHHHHH
Q 008656          526 WQQDPALRPDFSEIIE  541 (558)
Q Consensus       526 L~~dP~~RPs~~ell~  541 (558)
                      |..||.+||++.++++
T Consensus       289 L~~dP~~Rpt~~ell~  304 (387)
T 1kob_A          289 LQKEPRKRLTVHDALE  304 (387)
T ss_dssp             SCSSGGGSCCHHHHHT
T ss_pred             cCCChhHCcCHHHHhh
Confidence            9999999999999986


No 113
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00  E-value=3.2e-44  Score=369.86  Aligned_cols=262  Identities=27%  Similarity=0.535  Sum_probs=224.9

Q ss_pred             eeCCCceeeeeeeeecCceEEEEEEE------CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCC
Q 008656          288 EIDPKHLKFGSKVASGSYGDLYRGTY------CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKP  361 (558)
Q Consensus       288 ~i~~~~~~i~~~LG~GsfG~Vy~g~~------~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~  361 (558)
                      .+...+|++.++||+|+||.||++++      .++.||||+++..  .....+.+.+|+.++++++||||+++++++...
T Consensus        37 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  114 (326)
T 2w1i_A           37 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA  114 (326)
T ss_dssp             CCCGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC--CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC-
T ss_pred             ccCHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEec
Confidence            55667899999999999999999985      4678999999864  345567899999999999999999999988654


Q ss_pred             C--CceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCccee
Q 008656          362 P--SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV  439 (558)
Q Consensus       362 ~--~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~  439 (558)
                      .  .+++||||+++++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus       115 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~  194 (326)
T 2w1i_A          115 GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV  194 (326)
T ss_dssp             ---CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred             CCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhh
Confidence            3  78999999999999999988667799999999999999999999999999999999999999999999999999987


Q ss_pred             cccCCc----cccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCH---------------HHHHHH
Q 008656          440 KAQSGV----MTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTP---------------LQAAVG  500 (558)
Q Consensus       440 ~~~~~~----~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~---------------~~~~~~  500 (558)
                      ......    .....++..|+|||++.+..++.++||||||+++|+|++|..||.....               ......
T Consensus       195 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (326)
T 2w1i_A          195 LPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE  274 (326)
T ss_dssp             CCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHH
T ss_pred             ccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHH
Confidence            654432    2234577889999999999999999999999999999999998863211               111223


Q ss_pred             HHhcCCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHH
Q 008656          501 VVQKGLRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKEVY  551 (558)
Q Consensus       501 v~~~~~r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~~  551 (558)
                      .+..+.++..+..+++.+.+||.+||..||.+||++.++++.|+++..++.
T Consensus       275 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l~  325 (326)
T 2w1i_A          275 LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA  325 (326)
T ss_dssp             HHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             HhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence            444555667788999999999999999999999999999999999988764


No 114
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00  E-value=4e-44  Score=372.31  Aligned_cols=253  Identities=21%  Similarity=0.378  Sum_probs=216.3

Q ss_pred             ceeeCCCceeeeeeeeecCceEEEEEEE-CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccC--CCceEEEeeecCCC
Q 008656          286 VWEIDPKHLKFGSKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRH--KNVVQFIGACTKPP  362 (558)
Q Consensus       286 ~~~i~~~~~~i~~~LG~GsfG~Vy~g~~-~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~H--pnIv~l~g~~~~~~  362 (558)
                      ...+...+|++.++||+|+||.||++.+ .++.||||+++...........+.+|+.+|++++|  +||+++++++....
T Consensus         3 ~i~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~   82 (343)
T 3dbq_A            3 CISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ   82 (343)
T ss_dssp             CEESSSCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred             eeeeecCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCC
Confidence            3467788999999999999999999987 46779999998776677777889999999999987  99999999999999


Q ss_pred             CceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceeccc
Q 008656          363 SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ  442 (558)
Q Consensus       363 ~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~  442 (558)
                      .+|+|||+ .+++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||+++....
T Consensus        83 ~~~lv~e~-~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~  159 (343)
T 3dbq_A           83 YIYMVMEC-GNIDLNSWLKK-KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP  159 (343)
T ss_dssp             EEEEEECC-CSEEHHHHHHH-SCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC--
T ss_pred             EEEEEEeC-CCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccCc
Confidence            99999995 48899999987 56799999999999999999999999999999999999997 67899999999976543


Q ss_pred             CC---ccccCCCCCCccchhhhcC-----------CCCCchHHHHHHHHHHHHHHcCCCCCCCCC-HHHHHHHHHhcCCC
Q 008656          443 SG---VMTAETGTYRWMAPEVIEH-----------KPYDHKADVFSFGIVLWELLTGKLPYEYLT-PLQAAVGVVQKGLR  507 (558)
Q Consensus       443 ~~---~~~~~~gt~~y~APEv~~~-----------~~~s~ksDVwSlGilL~elltG~~Pf~~~~-~~~~~~~v~~~~~r  507 (558)
                      ..   ......||+.|+|||++.+           ..++.++|||||||++|+|++|+.||.... .......+......
T Consensus       160 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~  239 (343)
T 3dbq_A          160 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHE  239 (343)
T ss_dssp             ----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSC
T ss_pred             ccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcc
Confidence            32   2335679999999999964           778999999999999999999999998754 34445555555666


Q ss_pred             CCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          508 PTIPKNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       508 ~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                      ..++...++.+.+||.+||+.||.+|||+.++++
T Consensus       240 ~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~  273 (343)
T 3dbq_A          240 IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  273 (343)
T ss_dssp             CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence            7788889999999999999999999999999975


No 115
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=9.3e-45  Score=382.94  Aligned_cols=257  Identities=30%  Similarity=0.561  Sum_probs=213.4

Q ss_pred             CceeeeeeeeecCceEEEEEEECC-----ceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeec-CCCCce
Q 008656          292 KHLKFGSKVASGSYGDLYRGTYCS-----QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACT-KPPSLC  365 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~~~-----~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~-~~~~~~  365 (558)
                      ..|++.+.||+|+||.||+|++.+     ..||+|.++.. ........|.+|+.++++++||||+++++++. ..+..|
T Consensus        89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~  167 (373)
T 3c1x_A           89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL  167 (373)
T ss_dssp             EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC-SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCE
T ss_pred             ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeE
Confidence            357888999999999999998732     35899998753 23455688999999999999999999999864 456789


Q ss_pred             eEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccCC-
Q 008656          366 IVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSG-  444 (558)
Q Consensus       366 lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~-  444 (558)
                      +||||+++++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...... 
T Consensus       168 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~  247 (373)
T 3c1x_A          168 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF  247 (373)
T ss_dssp             EEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred             EEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeecccccccccccc
Confidence            9999999999999998766778999999999999999999999999999999999999999999999999997543322 


Q ss_pred             ----ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHH
Q 008656          445 ----VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLA  519 (558)
Q Consensus       445 ----~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~  519 (558)
                          ......+|+.|+|||++.+..++.++||||||+++|||++ |..||...+..+.... +..+.++..|..+++.+.
T Consensus       248 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~-~~~~~~~~~p~~~~~~l~  326 (373)
T 3c1x_A          248 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY-LLQGRRLLQPEYCPDPLY  326 (373)
T ss_dssp             ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHH-HHTTCCCCCCTTCCHHHH
T ss_pred             ccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHH-HHcCCCCCCCCCCCHHHH
Confidence                1233457889999999999999999999999999999999 7888987765554433 344556677889999999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHHHHHHHHHHH
Q 008656          520 ELLERCWQQDPALRPDFSEIIEILQQIAKEV  550 (558)
Q Consensus       520 ~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~  550 (558)
                      ++|.+||..||.+||++.++++.|+++...+
T Consensus       327 ~li~~cl~~dp~~RPs~~ell~~L~~i~~~~  357 (373)
T 3c1x_A          327 EVMLKCWHPKAEMRPSFSELVSRISAIFSTF  357 (373)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999998766


No 116
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00  E-value=1.8e-45  Score=376.23  Aligned_cols=265  Identities=30%  Similarity=0.629  Sum_probs=222.9

Q ss_pred             CCceeeCCCceeeeeeeeecCceEEEEEEECCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCC
Q 008656          284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS  363 (558)
Q Consensus       284 ~~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~  363 (558)
                      ...|++..++|++.+.||+|+||.||+|++.+ .||+|+++.........+.+.+|+.++++++||||+++++++...+.
T Consensus        25 ~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~-~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~  103 (319)
T 2y4i_B           25 LQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG-EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPH  103 (319)
T ss_dssp             GGGSSSCCSCEECCCBCCCSSSSEEEEEEESS-SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSC
T ss_pred             cccccCCHHHeEEeeEeccCCceEEEEEEEcC-eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCc
Confidence            35789999999999999999999999999866 59999998765544445668889999999999999999999999999


Q ss_pred             ceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceeccc-
Q 008656          364 LCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ-  442 (558)
Q Consensus       364 ~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~-  442 (558)
                      +++||||++|++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||+++.... 
T Consensus       104 ~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~  182 (319)
T 2y4i_B          104 LAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVL  182 (319)
T ss_dssp             EEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC-----
T ss_pred             eEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCCccccccc
Confidence            9999999999999999987666799999999999999999999999999999999999998 68999999999865432 


Q ss_pred             -----CCccccCCCCCCccchhhhcC---------CCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCC
Q 008656          443 -----SGVMTAETGTYRWMAPEVIEH---------KPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRP  508 (558)
Q Consensus       443 -----~~~~~~~~gt~~y~APEv~~~---------~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~  508 (558)
                           ........||+.|+|||++.+         ..++.++||||||+++|+|++|..||...........+.. +..+
T Consensus       183 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~-~~~~  261 (319)
T 2y4i_B          183 QAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGT-GMKP  261 (319)
T ss_dssp             -----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHT-TCCC
T ss_pred             cccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcc-CCCC
Confidence                 122334568999999999974         4589999999999999999999999998887776655444 3333


Q ss_pred             C-CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHH
Q 008656          509 T-IPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKEVY  551 (558)
Q Consensus       509 ~-ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~~  551 (558)
                      . .+..+++++.++|.+||..||.+||++.++++.|+++.+...
T Consensus       262 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~  305 (319)
T 2y4i_B          262 NLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNR  305 (319)
T ss_dssp             CCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-----
T ss_pred             CCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhc
Confidence            3 334688999999999999999999999999999999876653


No 117
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00  E-value=2.2e-44  Score=376.10  Aligned_cols=249  Identities=25%  Similarity=0.406  Sum_probs=210.2

Q ss_pred             CceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCC---ChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCcee
Q 008656          292 KHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERI---NSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCI  366 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~---~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~l  366 (558)
                      ++|++.+.||+|+||.||++++.  ++.||||+++....   .......+.+|+.+++.++||||+++++++...+.+|+
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l  103 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM  103 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            57999999999999999999874  78899999864321   11134678999999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCc---EEEEecCcceec
Q 008656          367 VTEFMSGGSVYDYLHKLK---GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV---VKVADFGVARVK  440 (558)
Q Consensus       367 V~E~~~ggsL~~~l~~~~---~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~---vkL~DFG~a~~~  440 (558)
                      ||||++|++|.+++....   ..+++..++.++.||+.||.|||++||+||||||+|||++.++.   +||+|||+++..
T Consensus       104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~  183 (351)
T 3c0i_A          104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL  183 (351)
T ss_dssp             EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEEC
T ss_pred             EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEe
Confidence            999999999998886532   34899999999999999999999999999999999999986654   999999999876


Q ss_pred             ccCCc-cccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCC--CCCCCcHH
Q 008656          441 AQSGV-MTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPT--IPKNSQPK  517 (558)
Q Consensus       441 ~~~~~-~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~--ip~~~~~~  517 (558)
                      ..... .....||+.|+|||++.+..|+.++|||||||++|+|++|..||.... .+....+........  ....++++
T Consensus       184 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~i~~~~~~~~~~~~~~~s~~  262 (351)
T 3c0i_A          184 GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK-ERLFEGIIKGKYKMNPRQWSHISES  262 (351)
T ss_dssp             CTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH-HHHHHHHHHTCCCCCHHHHTTSCHH
T ss_pred             cCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH-HHHHHHHHcCCCCCCccccccCCHH
Confidence            55432 445679999999999999999999999999999999999999998753 333333333322211  12568899


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          518 LAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       518 l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                      +.+||.+||..||.+||++.++++
T Consensus       263 ~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          263 AKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHCCCChhHCcCHHHHhc
Confidence            999999999999999999999985


No 118
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00  E-value=4.1e-44  Score=367.21  Aligned_cols=246  Identities=22%  Similarity=0.280  Sum_probs=207.2

Q ss_pred             CCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhc-cCCCceEEEeeecCCCCceeE
Q 008656          291 PKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKV-RHKNVVQFIGACTKPPSLCIV  367 (558)
Q Consensus       291 ~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l-~HpnIv~l~g~~~~~~~~~lV  367 (558)
                      .++|++.++||+|+||+||+|.+.  ++.||||++............+..|+..+.++ +||||+++++++...+.+|+|
T Consensus        56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv  135 (311)
T 3p1a_A           56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ  135 (311)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence            368999999999999999999985  78899999887655555555666676666655 899999999999999999999


Q ss_pred             EEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccCCccc
Q 008656          368 TEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMT  447 (558)
Q Consensus       368 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~  447 (558)
                      |||+ +++|.+++......+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..........
T Consensus       136 ~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  214 (311)
T 3p1a_A          136 TELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGE  214 (311)
T ss_dssp             EECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC------
T ss_pred             Eecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccCCCCc
Confidence            9999 789999998877789999999999999999999999999999999999999999999999999998776665666


Q ss_pred             cCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhhh
Q 008656          448 AETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELLERCWQ  527 (558)
Q Consensus       448 ~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~~Ll~~cL~  527 (558)
                      ...||+.|+|||++.+ .++.++|||||||++|||++|..|+......   ..+......+.++..+++++.+||.+||+
T Consensus       215 ~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~li~~~L~  290 (311)
T 3p1a_A          215 VQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGW---QQLRQGYLPPEFTAGLSSELRSVLVMMLE  290 (311)
T ss_dssp             CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHH---HHHTTTCCCHHHHTTSCHHHHHHHHHHSC
T ss_pred             ccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHH---HHHhccCCCcccccCCCHHHHHHHHHHcC
Confidence            6779999999999986 7999999999999999999997666543222   22223333344567789999999999999


Q ss_pred             cCCCCCCCHHHHHH
Q 008656          528 QDPALRPDFSEIIE  541 (558)
Q Consensus       528 ~dP~~RPs~~ell~  541 (558)
                      .||.+|||+.|+++
T Consensus       291 ~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          291 PDPKLRATAEALLA  304 (311)
T ss_dssp             SSTTTSCCHHHHHT
T ss_pred             CChhhCcCHHHHHh
Confidence            99999999999875


No 119
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=2.8e-44  Score=360.42  Aligned_cols=246  Identities=26%  Similarity=0.479  Sum_probs=194.7

Q ss_pred             CceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeEE
Q 008656          292 KHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERIN-SDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVT  368 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~-~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV~  368 (558)
                      ++|++.++||+|+||.||++.+  .++.||+|+++..... ......+.+|+.+++.++||||+++++++...+..++||
T Consensus        13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   92 (275)
T 2eue_A           13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred             cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence            5799999999999999999986  5788999999865433 344567899999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccCCcccc
Q 008656          369 EFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTA  448 (558)
Q Consensus       369 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~  448 (558)
                      ||+ +++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..........
T Consensus        93 e~~-~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  170 (275)
T 2eue_A           93 EYA-GNELFDYIVQ-RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT  170 (275)
T ss_dssp             ECC-CEEHHHHHHT-SSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCSSCC-----------
T ss_pred             hhc-CCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCChHhEEECCCCCEEEeecccceeccCcccccC
Confidence            999 7899998876 46799999999999999999999999999999999999999999999999999987666555566


Q ss_pred             CCCCCCccchhhhcCCCC-CchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhhh
Q 008656          449 ETGTYRWMAPEVIEHKPY-DHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELLERCWQ  527 (558)
Q Consensus       449 ~~gt~~y~APEv~~~~~~-s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~~Ll~~cL~  527 (558)
                      ..||+.|+|||++.+..+ +.++||||||+++|+|++|+.||...+.......+...  ...++..+++.+.+||.+||+
T Consensus       171 ~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~  248 (275)
T 2eue_A          171 SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG--VYTLPKFLSPGAAGLIKRMLI  248 (275)
T ss_dssp             ----CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT--CCCCCTTSCHHHHHHHHHHSC
T ss_pred             CCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCCCCccCCHHHHHHHHHHhh
Confidence            789999999999988876 78999999999999999999999988876665554443  345778899999999999999


Q ss_pred             cCCCCCCCHHHHHH
Q 008656          528 QDPALRPDFSEIIE  541 (558)
Q Consensus       528 ~dP~~RPs~~ell~  541 (558)
                      .||.+|||+.|+++
T Consensus       249 ~dP~~Rps~~e~l~  262 (275)
T 2eue_A          249 VNPLNRISIHEIMQ  262 (275)
T ss_dssp             SSGGGSCCHHHHTT
T ss_pred             cCHhHCCCHHHHhh
Confidence            99999999999874


No 120
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00  E-value=4.8e-44  Score=377.36  Aligned_cols=249  Identities=20%  Similarity=0.347  Sum_probs=214.4

Q ss_pred             eeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeEEEecC
Q 008656          295 KFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMS  372 (558)
Q Consensus       295 ~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~  372 (558)
                      ...+.||+|+||.||+|+.  .++.||+|+++...  ......+.+|+.+|++++||||+++++++...+.+|+||||++
T Consensus        92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~  169 (373)
T 2x4f_A           92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG--MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVD  169 (373)
T ss_dssp             EEEEECC-----CEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred             ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc--cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCC
Confidence            3367899999999999987  47889999998653  3445789999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEe--CCCCcEEEEecCcceecccCCccccCC
Q 008656          373 GGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM--DENEVVKVADFGVARVKAQSGVMTAET  450 (558)
Q Consensus       373 ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl--~~~~~vkL~DFG~a~~~~~~~~~~~~~  450 (558)
                      |++|.+++......+++..++.++.||+.||.|||++||+||||||+|||+  +.++.+||+|||+++............
T Consensus       170 ~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  249 (373)
T 2x4f_A          170 GGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF  249 (373)
T ss_dssp             TCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCCC
T ss_pred             CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccccccc
Confidence            999999998766779999999999999999999999999999999999999  567899999999998776665566678


Q ss_pred             CCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCC--CCCCCCcHHHHHHHHHhhhc
Q 008656          451 GTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRP--TIPKNSQPKLAELLERCWQQ  528 (558)
Q Consensus       451 gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~--~ip~~~~~~l~~Ll~~cL~~  528 (558)
                      ||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+....+.......  .....+++++.+||.+||+.
T Consensus       250 gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~  329 (373)
T 2x4f_A          250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIK  329 (373)
T ss_dssp             SSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCS
T ss_pred             CCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHHHHcCC
Confidence            9999999999999999999999999999999999999999988887777766554332  22356899999999999999


Q ss_pred             CCCCCCCHHHHHH--HHHH
Q 008656          529 DPALRPDFSEIIE--ILQQ  545 (558)
Q Consensus       529 dP~~RPs~~ell~--~L~~  545 (558)
                      ||.+||++.|+++  .|.+
T Consensus       330 dp~~Rps~~e~l~hp~~~~  348 (373)
T 2x4f_A          330 EKSWRISASEALKHPWLSD  348 (373)
T ss_dssp             SGGGSCCHHHHHHSHHHHC
T ss_pred             ChhhCCCHHHHhcCcCcCC
Confidence            9999999999986  4443


No 121
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00  E-value=1.6e-44  Score=373.02  Aligned_cols=248  Identities=26%  Similarity=0.437  Sum_probs=209.4

Q ss_pred             CceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeEEE
Q 008656          292 KHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTE  369 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV~E  369 (558)
                      ++|++.++||+|+||.||++.+.  ++.||||++...... .....+.+|+.+++.++||||+++++++..++..|+|||
T Consensus         7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   85 (323)
T 3tki_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (323)
T ss_dssp             TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEccccc-chHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence            67999999999999999999884  788999999755322 234678899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccC---Ccc
Q 008656          370 FMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQS---GVM  446 (558)
Q Consensus       370 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~---~~~  446 (558)
                      |++|++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....   ...
T Consensus        86 ~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~  164 (323)
T 3tki_A           86 YCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL  164 (323)
T ss_dssp             CCTTEEGGGGSBT-TTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCB
T ss_pred             cCCCCcHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCccccc
Confidence            9999999999965 456999999999999999999999999999999999999999999999999999765432   233


Q ss_pred             ccCCCCCCccchhhhcCCCC-CchHHHHHHHHHHHHHHcCCCCCCCCCHHHH-HHHHHhcCCCCCCCCCCcHHHHHHHHH
Q 008656          447 TAETGTYRWMAPEVIEHKPY-DHKADVFSFGIVLWELLTGKLPYEYLTPLQA-AVGVVQKGLRPTIPKNSQPKLAELLER  524 (558)
Q Consensus       447 ~~~~gt~~y~APEv~~~~~~-s~ksDVwSlGilL~elltG~~Pf~~~~~~~~-~~~v~~~~~r~~ip~~~~~~l~~Ll~~  524 (558)
                      ....||+.|+|||++.+..+ +.++|||||||++|+|++|..||........ ................+++.+.+||.+
T Consensus       165 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  244 (323)
T 3tki_A          165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK  244 (323)
T ss_dssp             CSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHH
T ss_pred             CCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHHHHH
Confidence            45679999999999988776 7799999999999999999999987655422 222233333333346789999999999


Q ss_pred             hhhcCCCCCCCHHHHHH
Q 008656          525 CWQQDPALRPDFSEIIE  541 (558)
Q Consensus       525 cL~~dP~~RPs~~ell~  541 (558)
                      ||..||.+|||+.|+++
T Consensus       245 ~L~~dP~~R~t~~eil~  261 (323)
T 3tki_A          245 ILVENPSARITIPDIKK  261 (323)
T ss_dssp             HSCSSTTTSCCHHHHTT
T ss_pred             HccCChhhCcCHHHHhh
Confidence            99999999999999864


No 122
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00  E-value=6e-45  Score=392.58  Aligned_cols=254  Identities=19%  Similarity=0.325  Sum_probs=219.1

Q ss_pred             eeCCCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCC-hHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCc
Q 008656          288 EIDPKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERIN-SDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSL  364 (558)
Q Consensus       288 ~i~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~-~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~  364 (558)
                      .+..++|++.++||+|+||.||+|++.  ++.||||+++..... ......+.+|+.+++.++||||+++++++.+...+
T Consensus        70 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~  149 (437)
T 4aw2_A           70 RLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNL  149 (437)
T ss_dssp             SCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEE
T ss_pred             cCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEE
Confidence            455678999999999999999999985  578999999753211 11123488899999999999999999999999999


Q ss_pred             eeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccCC
Q 008656          365 CIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSG  444 (558)
Q Consensus       365 ~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~  444 (558)
                      |+||||++||+|.+++.+..+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++......
T Consensus       150 ~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~  229 (437)
T 4aw2_A          150 YLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG  229 (437)
T ss_dssp             EEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS
T ss_pred             EEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCC
Confidence            99999999999999998767789999999999999999999999999999999999999999999999999997655443


Q ss_pred             c--cccCCCCCCccchhhhc-----CCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCC---CCC
Q 008656          445 V--MTAETGTYRWMAPEVIE-----HKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIP---KNS  514 (558)
Q Consensus       445 ~--~~~~~gt~~y~APEv~~-----~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip---~~~  514 (558)
                      .  .....||+.|+|||++.     +..|+.++|||||||++|||++|+.||...+..+....++....+..+|   ..+
T Consensus       230 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~  309 (437)
T 4aw2_A          230 TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDV  309 (437)
T ss_dssp             CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCCCS
T ss_pred             CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccccC
Confidence            2  33468999999999997     5679999999999999999999999999999888777776543333333   458


Q ss_pred             cHHHHHHHHHhhhcCCCC--CCCHHHHHH
Q 008656          515 QPKLAELLERCWQQDPAL--RPDFSEIIE  541 (558)
Q Consensus       515 ~~~l~~Ll~~cL~~dP~~--RPs~~ell~  541 (558)
                      ++++.+||.+||..+|++  ||++.|+++
T Consensus       310 s~~~~dLi~~lL~~~~~r~~r~~~~eil~  338 (437)
T 4aw2_A          310 SENAKDLIRRLICSREHRLGQNGIEDFKK  338 (437)
T ss_dssp             CHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred             CHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence            999999999999888887  999999875


No 123
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00  E-value=7e-44  Score=366.53  Aligned_cols=249  Identities=22%  Similarity=0.398  Sum_probs=218.9

Q ss_pred             CceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCCh----HHHHHHHHHHHHHHhccCCCceEEEeeecCCCCce
Q 008656          292 KHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINS----DMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLC  365 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~----~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~  365 (558)
                      ++|++.+.||+|+||.||++++.  ++.||+|+++......    .....+.+|+.++++++||||+++++++.....+|
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   91 (321)
T 2a2a_A           12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV   91 (321)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence            57999999999999999999984  7889999997654322    13577999999999999999999999999999999


Q ss_pred             eEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCC----cEEEEecCcceecc
Q 008656          366 IVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENE----VVKVADFGVARVKA  441 (558)
Q Consensus       366 lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~----~vkL~DFG~a~~~~  441 (558)
                      +||||++|++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++    .+||+|||+++...
T Consensus        92 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~  170 (321)
T 2a2a_A           92 LILELVSGGELFDFLAQ-KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE  170 (321)
T ss_dssp             EEECCCCSCBHHHHHHT-CSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECC
T ss_pred             EEEEcCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecC
Confidence            99999999999999976 56789999999999999999999999999999999999999887    79999999998776


Q ss_pred             cCCccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCC--CCCCCCCcHHHH
Q 008656          442 QSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLR--PTIPKNSQPKLA  519 (558)
Q Consensus       442 ~~~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r--~~ip~~~~~~l~  519 (558)
                      .........||+.|+|||++.+..++.++||||||+++|+|++|..||...+..+....+......  +..+..+++.+.
T Consensus       171 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  250 (321)
T 2a2a_A          171 DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAK  250 (321)
T ss_dssp             TTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHH
T ss_pred             ccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhcccCHHHH
Confidence            655556678999999999999999999999999999999999999999988877666555433221  122357889999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHH
Q 008656          520 ELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       520 ~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                      +||.+||..||.+|||+.++++
T Consensus       251 ~li~~~l~~dp~~Rps~~e~l~  272 (321)
T 2a2a_A          251 DFIRKLLVKETRKRLTIQEALR  272 (321)
T ss_dssp             HHHHTTSCSSTTTSCCHHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHhc
Confidence            9999999999999999999985


No 124
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00  E-value=4.2e-45  Score=375.34  Aligned_cols=258  Identities=27%  Similarity=0.469  Sum_probs=215.9

Q ss_pred             eCCCceeeeeeeeecCceEEEEEEEC-CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeE
Q 008656          289 IDPKHLKFGSKVASGSYGDLYRGTYC-SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIV  367 (558)
Q Consensus       289 i~~~~~~i~~~LG~GsfG~Vy~g~~~-~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV  367 (558)
                      ...++|++.+.||+|+||.||+|++. ++.||||++....  ......+.+|+.+++.++||||+++++++...+..++|
T Consensus        36 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  113 (321)
T 2qkw_B           36 EATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES--SQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILI  113 (321)
T ss_dssp             CCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCC--SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEE
T ss_pred             HHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEE
Confidence            34578999999999999999999975 7889999987653  33457899999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccCC
Q 008656          368 TEFMSGGSVYDYLHKLK---GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSG  444 (558)
Q Consensus       368 ~E~~~ggsL~~~l~~~~---~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~  444 (558)
                      |||++|++|.+++....   ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus       114 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  193 (321)
T 2qkw_B          114 YKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELD  193 (321)
T ss_dssp             EECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSS
T ss_pred             EEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeeccccccccccc
Confidence            99999999999986532   258999999999999999999999999999999999999999999999999997644321


Q ss_pred             ---ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHH------HHHHHHh---------cCC
Q 008656          445 ---VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQ------AAVGVVQ---------KGL  506 (558)
Q Consensus       445 ---~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~------~~~~v~~---------~~~  506 (558)
                         ......||+.|+|||++.+..++.++||||||+++|+|++|+.||....+..      .......         ...
T Consensus       194 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (321)
T 2qkw_B          194 QTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNL  273 (321)
T ss_dssp             CCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSC
T ss_pred             ccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhh
Confidence               2334468999999999999999999999999999999999999997543321      1111111         111


Q ss_pred             CCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHH
Q 008656          507 RPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAK  548 (558)
Q Consensus       507 r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~  548 (558)
                      ...++..++..+.+++.+||+.||.+||++.++++.|+.+++
T Consensus       274 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~  315 (321)
T 2qkw_B          274 ADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR  315 (321)
T ss_dssp             TTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence            222334456789999999999999999999999999999875


No 125
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00  E-value=3.7e-45  Score=380.93  Aligned_cols=246  Identities=29%  Similarity=0.496  Sum_probs=213.1

Q ss_pred             CceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeEE
Q 008656          292 KHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERIN-SDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVT  368 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~-~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV~  368 (558)
                      ++|++.+.||+|+||.||+|.+  +++.||||++...... ......+.+|+.+++.++||||+++++++..+..+|+||
T Consensus         9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   88 (336)
T 3h4j_B            9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI   88 (336)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            5799999999999999999998  5788999998753221 122357889999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccCCcccc
Q 008656          369 EFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTA  448 (558)
Q Consensus       369 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~  448 (558)
                      ||+ +|+|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...........
T Consensus        89 E~~-~g~l~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~~  166 (336)
T 3h4j_B           89 EYA-GGELFDYIVE-KKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKT  166 (336)
T ss_dssp             CCC-CEEHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTCC
T ss_pred             ECC-CCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCccccc
Confidence            999 7899999876 56799999999999999999999999999999999999999999999999999987766666667


Q ss_pred             CCCCCCccchhhhcCCCC-CchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhhh
Q 008656          449 ETGTYRWMAPEVIEHKPY-DHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELLERCWQ  527 (558)
Q Consensus       449 ~~gt~~y~APEv~~~~~~-s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~~Ll~~cL~  527 (558)
                      ..||+.|+|||++.+..+ +.++|||||||++|+|++|..||...........+  ......+|..+++.+.+||.+||.
T Consensus       167 ~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i--~~~~~~~p~~~s~~~~~li~~~L~  244 (336)
T 3h4j_B          167 SCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKV--NSCVYVMPDFLSPGAQSLIRRMIV  244 (336)
T ss_dssp             CTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCC--CSSCCCCCTTSCHHHHHHHHTTSC
T ss_pred             ccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHH--HcCCCCCcccCCHHHHHHHHHHcC
Confidence            789999999999998886 78999999999999999999999765432211111  112345678899999999999999


Q ss_pred             cCCCCCCCHHHHHH
Q 008656          528 QDPALRPDFSEIIE  541 (558)
Q Consensus       528 ~dP~~RPs~~ell~  541 (558)
                      .||.+|||+.|+++
T Consensus       245 ~dP~~Rpt~~eil~  258 (336)
T 3h4j_B          245 ADPMQRITIQEIRR  258 (336)
T ss_dssp             SSGGGSCCHHHHTT
T ss_pred             CChhHCcCHHHHHh
Confidence            99999999999974


No 126
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00  E-value=2e-43  Score=360.32  Aligned_cols=262  Identities=21%  Similarity=0.421  Sum_probs=211.3

Q ss_pred             CCceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCC-CChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeE
Q 008656          291 PKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPER-INSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIV  367 (558)
Q Consensus       291 ~~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~-~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV  367 (558)
                      ..+|++.+.||+|+||.||+|..  .++.||||+++... ........+.+|+.++++++||||+++++++...+..++|
T Consensus        31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv  110 (310)
T 2wqm_A           31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV  110 (310)
T ss_dssp             GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence            35799999999999999999997  57889999998643 3455667899999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccCC
Q 008656          368 TEFMSGGSVYDYLHKL---KGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSG  444 (558)
Q Consensus       368 ~E~~~ggsL~~~l~~~---~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~  444 (558)
                      |||+.+++|.+++...   ...+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+++......
T Consensus       111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~  190 (310)
T 2wqm_A          111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT  190 (310)
T ss_dssp             EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC----------
T ss_pred             EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCC
Confidence            9999999999998653   4568999999999999999999999999999999999999999999999999987654332


Q ss_pred             -ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCC--HHHHHHHHHhcCCCCCCCCCCcHHHHHH
Q 008656          445 -VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLT--PLQAAVGVVQKGLRPTIPKNSQPKLAEL  521 (558)
Q Consensus       445 -~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~--~~~~~~~v~~~~~r~~ip~~~~~~l~~L  521 (558)
                       ......|++.|+|||++.+..++.++||||||+++|+|++|..||....  .......+......+..+..+++++.+|
T Consensus       191 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  270 (310)
T 2wqm_A          191 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQL  270 (310)
T ss_dssp             --------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCHHHHHH
T ss_pred             ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCHHHHHH
Confidence             2334578999999999999999999999999999999999999997542  2333333333333333446789999999


Q ss_pred             HHHhhhcCCCCCCCHHHHHHHHHHHHHHHHh
Q 008656          522 LERCWQQDPALRPDFSEIIEILQQIAKEVYS  552 (558)
Q Consensus       522 l~~cL~~dP~~RPs~~ell~~L~~l~~~~~~  552 (558)
                      |.+||..||.+||++.++++.|+++......
T Consensus       271 i~~~l~~dp~~Rps~~~il~~l~~l~~~~~~  301 (310)
T 2wqm_A          271 VNMCINPDPEKRPDVTYVYDVAKRMHACTAS  301 (310)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred             HHHHcCCChhhCCCHHHHHHHHHHHHHhhhh
Confidence            9999999999999999999999999876643


No 127
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00  E-value=7.2e-44  Score=372.43  Aligned_cols=246  Identities=30%  Similarity=0.460  Sum_probs=217.9

Q ss_pred             CceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeEE
Q 008656          292 KHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERIN-SDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVT  368 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~-~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV~  368 (558)
                      +.|++.+.||+|+||.||+|+.  .++.||||++...... ......+.+|+.++++++||||+++++++..+...|+||
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  133 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM  133 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence            4589999999999999999996  5788999999865433 344577999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccCCcccc
Q 008656          369 EFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTA  448 (558)
Q Consensus       369 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~  448 (558)
                      ||+. |+|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....   ..
T Consensus       134 e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~---~~  209 (348)
T 1u5q_A          134 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA---NS  209 (348)
T ss_dssp             ECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB---CC
T ss_pred             ecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC---Cc
Confidence            9996 6899998776778999999999999999999999999999999999999999999999999999765432   34


Q ss_pred             CCCCCCccchhhhc---CCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHh
Q 008656          449 ETGTYRWMAPEVIE---HKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELLERC  525 (558)
Q Consensus       449 ~~gt~~y~APEv~~---~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~~Ll~~c  525 (558)
                      ..||+.|+|||++.   ...++.++|||||||++|||++|..||...+.......+.........+..+++.+.+||.+|
T Consensus       210 ~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  289 (348)
T 1u5q_A          210 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSC  289 (348)
T ss_dssp             CCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHH
T ss_pred             ccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHH
Confidence            57999999999984   577999999999999999999999999998887777766665554455678899999999999


Q ss_pred             hhcCCCCCCCHHHHHH
Q 008656          526 WQQDPALRPDFSEIIE  541 (558)
Q Consensus       526 L~~dP~~RPs~~ell~  541 (558)
                      |+.||.+|||+.++++
T Consensus       290 l~~dP~~Rps~~~ll~  305 (348)
T 1u5q_A          290 LQKIPQDRPTSEVLLK  305 (348)
T ss_dssp             TCSSGGGSCCHHHHTT
T ss_pred             cccChhhCcCHHHHhh
Confidence            9999999999999874


No 128
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00  E-value=2.1e-44  Score=368.85  Aligned_cols=256  Identities=27%  Similarity=0.450  Sum_probs=212.3

Q ss_pred             CCceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCC-ChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCc---
Q 008656          291 PKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERI-NSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSL---  364 (558)
Q Consensus       291 ~~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~-~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~---  364 (558)
                      .++|++.+.||+|+||.||++++  .++.||||+++.... .......+.+|+.++++++||||+++++++......   
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~   90 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   90 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence            46899999999999999999997  578899999987644 345567899999999999999999999998765544   


Q ss_pred             -eeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccC
Q 008656          365 -CIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQS  443 (558)
Q Consensus       365 -~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~  443 (558)
                       |+||||++|++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus        91 ~~lv~e~~~g~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~  169 (311)
T 3ork_A           91 PYIVMEYVDGVTLRDIVHT-EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS  169 (311)
T ss_dssp             EEEEEECCCEEEHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC------
T ss_pred             cEEEEecCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCccccccc
Confidence             999999999999999976 567999999999999999999999999999999999999999999999999999765443


Q ss_pred             C----ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCC--CCCCCcHH
Q 008656          444 G----VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPT--IPKNSQPK  517 (558)
Q Consensus       444 ~----~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~--ip~~~~~~  517 (558)
                      .    ......||+.|+|||++.+..++.++||||||+++|+|++|+.||...++.............+.  .+..++++
T Consensus       170 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (311)
T 3ork_A          170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSAD  249 (311)
T ss_dssp             ------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTCCHH
T ss_pred             ccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCCCCHH
Confidence            2    22334689999999999999999999999999999999999999999988877766665543322  23568999


Q ss_pred             HHHHHHHhhhcCCCCCCCHH-HHHHHHHHHH
Q 008656          518 LAELLERCWQQDPALRPDFS-EIIEILQQIA  547 (558)
Q Consensus       518 l~~Ll~~cL~~dP~~RPs~~-ell~~L~~l~  547 (558)
                      +.++|.+||+.||.+||+.. ++...|.++.
T Consensus       250 l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~  280 (311)
T 3ork_A          250 LDAVVLKALAKNPENRYQTAAEMRADLVRVH  280 (311)
T ss_dssp             HHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence            99999999999999999654 4555565554


No 129
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00  E-value=5.1e-44  Score=373.36  Aligned_cols=246  Identities=24%  Similarity=0.402  Sum_probs=197.0

Q ss_pred             CCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeEE
Q 008656          291 PKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVT  368 (558)
Q Consensus       291 ~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV~  368 (558)
                      .++|++.+.||+|+||.||+|++.  ++.||||+++...    ..+.+.+|+.++++++||||+++++++..+...++||
T Consensus        52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~  127 (349)
T 2w4o_A           52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVL  127 (349)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------CHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEE
Confidence            367999999999999999999985  5679999998542    2356888999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCC---CCcEEEEecCcceecccCCc
Q 008656          369 EFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDE---NEVVKVADFGVARVKAQSGV  445 (558)
Q Consensus       369 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~---~~~vkL~DFG~a~~~~~~~~  445 (558)
                      ||++|++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.   ++.+||+|||+++.......
T Consensus       128 e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~  206 (349)
T 2w4o_A          128 ELVTGGELFDRIVE-KGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVL  206 (349)
T ss_dssp             CCCCSCBHHHHHTT-CSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC----------
T ss_pred             EeCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcccc
Confidence            99999999999976 567999999999999999999999999999999999999975   88999999999987665555


Q ss_pred             cccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHH-HHHhcCCC--CCCCCCCcHHHHHHH
Q 008656          446 MTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAV-GVVQKGLR--PTIPKNSQPKLAELL  522 (558)
Q Consensus       446 ~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~-~v~~~~~r--~~ip~~~~~~l~~Ll  522 (558)
                      .....||+.|+|||++.+..++.++|||||||++|+|++|..||......+... .+......  ......+++++.+||
T Consensus       207 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  286 (349)
T 2w4o_A          207 MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLV  286 (349)
T ss_dssp             ------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHH
T ss_pred             cccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHHH
Confidence            566789999999999999999999999999999999999999998776555333 33332221  223357899999999


Q ss_pred             HHhhhcCCCCCCCHHHHHH
Q 008656          523 ERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       523 ~~cL~~dP~~RPs~~ell~  541 (558)
                      .+||..||.+||++.++++
T Consensus       287 ~~~L~~dP~~Rpt~~e~l~  305 (349)
T 2w4o_A          287 RKLIVLDPKKRLTTFQALQ  305 (349)
T ss_dssp             HTTSCSSGGGSCCHHHHHH
T ss_pred             HHHccCChhhCcCHHHHhc
Confidence            9999999999999999875


No 130
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00  E-value=8.3e-44  Score=362.98  Aligned_cols=249  Identities=22%  Similarity=0.352  Sum_probs=208.7

Q ss_pred             CceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeEEE
Q 008656          292 KHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTE  369 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV~E  369 (558)
                      ++|++.++||+|+||.||+|.+.  ++.||||++..........+.+.+|+.++++++||||+++++++...+..++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE   82 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence            57999999999999999999985  7889999998776666667889999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccC-Ccccc
Q 008656          370 FMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQS-GVMTA  448 (558)
Q Consensus       370 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~-~~~~~  448 (558)
                      |+++++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+++..... .....
T Consensus        83 ~~~~~~l~~~~~~-~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  161 (311)
T 4agu_A           83 YCDHTVLHELDRY-QRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDD  161 (311)
T ss_dssp             CCSEEHHHHHHHT-SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC--------
T ss_pred             eCCCchHHHHHhh-hcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccCC
Confidence            9999999998865 567999999999999999999999999999999999999999999999999999876533 33455


Q ss_pred             CCCCCCccchhhhcC-CCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc-------------------CCCC
Q 008656          449 ETGTYRWMAPEVIEH-KPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQK-------------------GLRP  508 (558)
Q Consensus       449 ~~gt~~y~APEv~~~-~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~-------------------~~r~  508 (558)
                      ..||+.|+|||++.+ ..++.++||||||+++|+|++|..||...+..+....+...                   +...
T Consensus       162 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (311)
T 4agu_A          162 EVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKI  241 (311)
T ss_dssp             ----GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCC
T ss_pred             CcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcC
Confidence            679999999999976 67899999999999999999999999988776654443221                   0010


Q ss_pred             CC----------CCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          509 TI----------PKNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       509 ~i----------p~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                      ..          ...+++.+.+||.+||+.||.+|||+.|+++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  284 (311)
T 4agu_A          242 PDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH  284 (311)
T ss_dssp             CCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred             CCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence            00          1357888999999999999999999999974


No 131
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00  E-value=1.3e-43  Score=355.49  Aligned_cols=246  Identities=24%  Similarity=0.400  Sum_probs=216.4

Q ss_pred             CceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeEEE
Q 008656          292 KHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTE  369 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV~E  369 (558)
                      ++|++.++||+|+||.||+|.+.  +..||+|++......  ....+.+|+.++++++||||+++++++......|+|||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   86 (277)
T 3f3z_A            9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE--DVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME   86 (277)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCS--CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccc--hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence            57999999999999999999985  457999998764332  24678999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEe---CCCCcEEEEecCcceecccCCcc
Q 008656          370 FMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM---DENEVVKVADFGVARVKAQSGVM  446 (558)
Q Consensus       370 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl---~~~~~vkL~DFG~a~~~~~~~~~  446 (558)
                      |++|++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+||++   +.++.+||+|||++.........
T Consensus        87 ~~~~~~L~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~  165 (277)
T 3f3z_A           87 LCTGGELFERVVH-KRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM  165 (277)
T ss_dssp             CCCSCBHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCB
T ss_pred             ccCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccch
Confidence            9999999999976 5679999999999999999999999999999999999999   78889999999999877666666


Q ss_pred             ccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCC--CCCCcHHHHHHHHH
Q 008656          447 TAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTI--PKNSQPKLAELLER  524 (558)
Q Consensus       447 ~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~i--p~~~~~~l~~Ll~~  524 (558)
                      ....||+.|+|||++.+. ++.++||||||+++|+|++|..||...+..+....+.........  ...+++.+.+||.+
T Consensus       166 ~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  244 (277)
T 3f3z_A          166 RTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRR  244 (277)
T ss_dssp             CCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHH
T ss_pred             hccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHHHHHHHH
Confidence            677899999999999765 999999999999999999999999998887776665554332211  12688999999999


Q ss_pred             hhhcCCCCCCCHHHHHH
Q 008656          525 CWQQDPALRPDFSEIIE  541 (558)
Q Consensus       525 cL~~dP~~RPs~~ell~  541 (558)
                      ||+.||.+||++.++++
T Consensus       245 ~l~~dp~~R~s~~~~l~  261 (277)
T 3f3z_A          245 LLTKSPKQRITSLQALE  261 (277)
T ss_dssp             HTCSSTTTSCCHHHHTT
T ss_pred             HccCChhhCcCHHHHhc
Confidence            99999999999999985


No 132
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00  E-value=1.5e-43  Score=355.92  Aligned_cols=255  Identities=24%  Similarity=0.448  Sum_probs=216.4

Q ss_pred             CceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCCh----HHHHHHHHHHHHHHhccCCCceEEEeeecCCCCce
Q 008656          292 KHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINS----DMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLC  365 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~----~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~  365 (558)
                      ++|++.+.||+|+||.||++++.  ++.||+|+++......    .....+.+|+.++++++||||+++++++......+
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV   84 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence            47999999999999999999985  7889999998654322    13578999999999999999999999999999999


Q ss_pred             eEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCC----cEEEEecCcceecc
Q 008656          366 IVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENE----VVKVADFGVARVKA  441 (558)
Q Consensus       366 lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~----~vkL~DFG~a~~~~  441 (558)
                      +||||+++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+||+++.++    .+||+|||++....
T Consensus        85 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~  163 (283)
T 3bhy_A           85 LILELVSGGELFDFLAE-KESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE  163 (283)
T ss_dssp             EEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC
T ss_pred             EEEeecCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceecc
Confidence            99999999999999976 56799999999999999999999999999999999999998877    89999999998766


Q ss_pred             cCCccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCC--CCCCCCCcHHHH
Q 008656          442 QSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLR--PTIPKNSQPKLA  519 (558)
Q Consensus       442 ~~~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r--~~ip~~~~~~l~  519 (558)
                      .........||+.|+|||++.+..++.++||||||+++|+|++|..||...+..+....+......  ...+..+++.+.
T Consensus       164 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (283)
T 3bhy_A          164 AGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAK  243 (283)
T ss_dssp             --------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHH
T ss_pred             CCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhcccCCHHHH
Confidence            555555667999999999999999999999999999999999999999988877665554433221  122357789999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHH--HHHHHH
Q 008656          520 ELLERCWQQDPALRPDFSEIIE--ILQQIA  547 (558)
Q Consensus       520 ~Ll~~cL~~dP~~RPs~~ell~--~L~~l~  547 (558)
                      +||.+||..||.+||++.++++  .++.+.
T Consensus       244 ~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  273 (283)
T 3bhy_A          244 DFIRRLLVKDPKRRMTIAQSLEHSWIKAIR  273 (283)
T ss_dssp             HHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred             HHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence            9999999999999999999986  455543


No 133
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00  E-value=1.3e-43  Score=365.73  Aligned_cols=244  Identities=29%  Similarity=0.461  Sum_probs=213.8

Q ss_pred             ceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeEEEe
Q 008656          293 HLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEF  370 (558)
Q Consensus       293 ~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~  370 (558)
                      .|+..++||+|+||.||+|+..  ++.||||+++....  .....+.+|+.++++++||||+++++++...+..++||||
T Consensus        46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  123 (321)
T 2c30_A           46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ--QRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEF  123 (321)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--CSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch--hHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEec
Confidence            4677789999999999999984  78899999976532  2346788999999999999999999999998999999999


Q ss_pred             cCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccCC-ccccC
Q 008656          371 MSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSG-VMTAE  449 (558)
Q Consensus       371 ~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~-~~~~~  449 (558)
                      ++|++|.+++..  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...... .....
T Consensus       124 ~~~~~L~~~l~~--~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~  201 (321)
T 2c30_A          124 LQGGALTDIVSQ--VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSL  201 (321)
T ss_dssp             CCSCBHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCC
T ss_pred             CCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccccc
Confidence            999999999864  569999999999999999999999999999999999999999999999999998655432 34456


Q ss_pred             CCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCC--CCCCCcHHHHHHHHHhhh
Q 008656          450 TGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPT--IPKNSQPKLAELLERCWQ  527 (558)
Q Consensus       450 ~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~--ip~~~~~~l~~Ll~~cL~  527 (558)
                      .||+.|+|||++.+..++.++||||||+++|+|++|+.||...+..+....+... ..+.  .+..+++.+.+||.+||+
T Consensus       202 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~  280 (321)
T 2c30_A          202 VGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDS-PPPKLKNSHKVSPVLRDFLERMLV  280 (321)
T ss_dssp             CSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS-SCCCCTTGGGSCHHHHHHHHHHSC
T ss_pred             cCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-CCCCcCccccCCHHHHHHHHHHcc
Confidence            7999999999999999999999999999999999999999988887766554433 2222  234678999999999999


Q ss_pred             cCCCCCCCHHHHHH
Q 008656          528 QDPALRPDFSEIIE  541 (558)
Q Consensus       528 ~dP~~RPs~~ell~  541 (558)
                      .||.+||++.++++
T Consensus       281 ~dp~~Rps~~ell~  294 (321)
T 2c30_A          281 RDPQERATAQELLD  294 (321)
T ss_dssp             SSTTTSCCHHHHHT
T ss_pred             CChhhCcCHHHHhc
Confidence            99999999999975


No 134
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00  E-value=1.4e-43  Score=375.94  Aligned_cols=253  Identities=21%  Similarity=0.373  Sum_probs=216.4

Q ss_pred             ceeeCCCceeeeeeeeecCceEEEEEEEC-CceEEEEEecCCCCChHHHHHHHHHHHHHHhcc--CCCceEEEeeecCCC
Q 008656          286 VWEIDPKHLKFGSKVASGSYGDLYRGTYC-SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVR--HKNVVQFIGACTKPP  362 (558)
Q Consensus       286 ~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~-~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~--HpnIv~l~g~~~~~~  362 (558)
                      ...+...+|++.+.||+|+||.||++.+. ++.||||+++...........+.+|+.+|++++  ||||+++++++....
T Consensus        50 ~~~~~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~  129 (390)
T 2zmd_A           50 CISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ  129 (390)
T ss_dssp             CEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred             cccccCCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCC
Confidence            34666778999999999999999999874 678999999877666677788999999999997  599999999999999


Q ss_pred             CceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceeccc
Q 008656          363 SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ  442 (558)
Q Consensus       363 ~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~  442 (558)
                      .+|+|||+ .+++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||+++....
T Consensus       130 ~~~lv~E~-~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~  206 (390)
T 2zmd_A          130 YIYMVMEC-GNIDLNSWLKK-KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP  206 (390)
T ss_dssp             EEEEEEEC-CSEEHHHHHHH-CSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC--
T ss_pred             EEEEEEec-CCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCccccccC
Confidence            99999994 58899999987 45789999999999999999999999999999999999996 58999999999986543


Q ss_pred             CC---ccccCCCCCCccchhhhcC-----------CCCCchHHHHHHHHHHHHHHcCCCCCCCCC-HHHHHHHHHhcCCC
Q 008656          443 SG---VMTAETGTYRWMAPEVIEH-----------KPYDHKADVFSFGIVLWELLTGKLPYEYLT-PLQAAVGVVQKGLR  507 (558)
Q Consensus       443 ~~---~~~~~~gt~~y~APEv~~~-----------~~~s~ksDVwSlGilL~elltG~~Pf~~~~-~~~~~~~v~~~~~r  507 (558)
                      ..   ......||+.|+|||++.+           ..|+.++|||||||++|+|++|..||.... .......++.....
T Consensus       207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~  286 (390)
T 2zmd_A          207 DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHE  286 (390)
T ss_dssp             -------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSC
T ss_pred             CCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCcccc
Confidence            32   2345679999999999975           468999999999999999999999998764 34445555555666


Q ss_pred             CCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          508 PTIPKNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       508 ~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                      ..++...++.+.+||.+||..||.+||++.|+++
T Consensus       287 ~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  320 (390)
T 2zmd_A          287 IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  320 (390)
T ss_dssp             CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCCCccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence            6778888999999999999999999999999974


No 135
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00  E-value=9.2e-45  Score=388.06  Aligned_cols=252  Identities=21%  Similarity=0.314  Sum_probs=217.4

Q ss_pred             eeCCCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCC-ChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCc
Q 008656          288 EIDPKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERI-NSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSL  364 (558)
Q Consensus       288 ~i~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~-~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~  364 (558)
                      .+..++|++.++||+|+||.||++++.  ++.||+|+++.... .......+.+|+.+++.++||||+++++++.+...+
T Consensus        65 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~  144 (410)
T 3v8s_A           65 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL  144 (410)
T ss_dssp             SCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             ccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEE
Confidence            445578999999999999999999984  67899999875211 111123578899999999999999999999999999


Q ss_pred             eeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccCC
Q 008656          365 CIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSG  444 (558)
Q Consensus       365 ~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~  444 (558)
                      |+||||++||+|.+++..  ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++......
T Consensus       145 ~lV~E~~~gg~L~~~l~~--~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~  222 (410)
T 3v8s_A          145 YMVMEYMPGGDLVNLMSN--YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG  222 (410)
T ss_dssp             EEEECCCTTEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS
T ss_pred             EEEEeCCCCCcHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCC
Confidence            999999999999999965  568999999999999999999999999999999999999999999999999998765543


Q ss_pred             c--cccCCCCCCccchhhhcCCC----CCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCC--CCCCcH
Q 008656          445 V--MTAETGTYRWMAPEVIEHKP----YDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTI--PKNSQP  516 (558)
Q Consensus       445 ~--~~~~~gt~~y~APEv~~~~~----~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~i--p~~~~~  516 (558)
                      .  .....||+.|+|||++.+..    |+.++|||||||++|||++|..||...+.......++.......+  ...+++
T Consensus       223 ~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~  302 (410)
T 3v8s_A          223 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISK  302 (410)
T ss_dssp             EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTTCCCCH
T ss_pred             cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCCcccccH
Confidence            2  34668999999999998766    889999999999999999999999999888877777654322233  347899


Q ss_pred             HHHHHHHHhhhcCCCC--CCCHHHHHH
Q 008656          517 KLAELLERCWQQDPAL--RPDFSEIIE  541 (558)
Q Consensus       517 ~l~~Ll~~cL~~dP~~--RPs~~ell~  541 (558)
                      ++.+||.+||..+|.+  ||++.|+++
T Consensus       303 ~~~~li~~lL~~~~~rlgR~~~~ei~~  329 (410)
T 3v8s_A          303 EAKNLICAFLTDREVRLGRNGVEEIKR  329 (410)
T ss_dssp             HHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred             HHHHHHHHHccChhhhCCCCCHHHHhc
Confidence            9999999999988888  999999875


No 136
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00  E-value=8.7e-44  Score=366.43  Aligned_cols=263  Identities=30%  Similarity=0.561  Sum_probs=223.8

Q ss_pred             ceeeCCCceeeeeeeeecCceEEEEEEE-------CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeee
Q 008656          286 VWEIDPKHLKFGSKVASGSYGDLYRGTY-------CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGAC  358 (558)
Q Consensus       286 ~~~i~~~~~~i~~~LG~GsfG~Vy~g~~-------~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~  358 (558)
                      ..++..++|++.+.||+|+||.||+|++       .++.||||++... ........+.+|+.++++++||||+++++++
T Consensus        24 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~  102 (327)
T 2yfx_A           24 LKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV-CSEQDELDFLMEALIISKFNHQNIVRCIGVS  102 (327)
T ss_dssp             SCBCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccc-cchhhHHHHHHHHHHHhhCCCCCCCeEEEEE
Confidence            3467778999999999999999999984       3457999999744 3445567899999999999999999999999


Q ss_pred             cCCCCceeEEEecCCCCHHHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCC---CCcE
Q 008656          359 TKPPSLCIVTEFMSGGSVYDYLHKLK------GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDE---NEVV  429 (558)
Q Consensus       359 ~~~~~~~lV~E~~~ggsL~~~l~~~~------~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~---~~~v  429 (558)
                      ......|+||||++|++|.+++....      ..+++..++.++.||+.||.|||++||+||||||+|||++.   +..+
T Consensus       103 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~  182 (327)
T 2yfx_A          103 LQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA  182 (327)
T ss_dssp             CSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCE
T ss_pred             cCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceE
Confidence            99999999999999999999998643      34889999999999999999999999999999999999984   4469


Q ss_pred             EEEecCcceecccCC---ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcC
Q 008656          430 KVADFGVARVKAQSG---VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQKG  505 (558)
Q Consensus       430 kL~DFG~a~~~~~~~---~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~~v~~~~  505 (558)
                      ||+|||+++......   ......||+.|+|||++.+..++.++||||||+++|+|++ |..||......+.... +..+
T Consensus       183 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~-~~~~  261 (327)
T 2yfx_A          183 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF-VTSG  261 (327)
T ss_dssp             EECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH-HHTT
T ss_pred             EECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHH-HhcC
Confidence            999999987543322   2234467899999999999999999999999999999998 9999998877655443 4455


Q ss_pred             CCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHH
Q 008656          506 LRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKEV  550 (558)
Q Consensus       506 ~r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~  550 (558)
                      .++..+..+++.+.++|.+||+.||.+||++.++++.|+.+.++-
T Consensus       262 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~  306 (327)
T 2yfx_A          262 GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP  306 (327)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred             CCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence            567788899999999999999999999999999999999887643


No 137
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=9.1e-44  Score=375.70  Aligned_cols=247  Identities=22%  Similarity=0.381  Sum_probs=200.9

Q ss_pred             CceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCChHHHHHHHHHHHHHHhcc-CCCceEEEeeecCC--CCcee
Q 008656          292 KHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVR-HKNVVQFIGACTKP--PSLCI  366 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~-HpnIv~l~g~~~~~--~~~~l  366 (558)
                      ++|++.++||+|+||.||+|.+  +++.||||++............+.+|+.+++.+. ||||+++++++..+  ..+|+
T Consensus         9 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~l   88 (388)
T 3oz6_A            9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYL   88 (388)
T ss_dssp             TTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEE
T ss_pred             CceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEE
Confidence            6899999999999999999987  4788999999876556666788899999999997 99999999998644  36899


Q ss_pred             EEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceeccc----
Q 008656          367 VTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ----  442 (558)
Q Consensus       367 V~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~----  442 (558)
                      |||||+ ++|.+++..  +.+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....    
T Consensus        89 v~e~~~-~~L~~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~  165 (388)
T 3oz6_A           89 VFDYME-TDLHAVIRA--NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRV  165 (388)
T ss_dssp             EEECCS-EEHHHHHHH--TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCC
T ss_pred             EecccC-cCHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccccc
Confidence            999996 699999975  5789999999999999999999999999999999999999999999999999976432    


Q ss_pred             ------------------CCccccCCCCCCccchhhhcC-CCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q 008656          443 ------------------SGVMTAETGTYRWMAPEVIEH-KPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQ  503 (558)
Q Consensus       443 ------------------~~~~~~~~gt~~y~APEv~~~-~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~  503 (558)
                                        ....+...||+.|+|||++.+ ..|+.++|||||||++|||++|+.||.+.+.......++.
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~  245 (388)
T 3oz6_A          166 TNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIG  245 (388)
T ss_dssp             CCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence                              112345579999999999986 6799999999999999999999999998887766555442


Q ss_pred             cCCCCC---------------------------------------------CCCCCcHHHHHHHHHhhhcCCCCCCCHHH
Q 008656          504 KGLRPT---------------------------------------------IPKNSQPKLAELLERCWQQDPALRPDFSE  538 (558)
Q Consensus       504 ~~~r~~---------------------------------------------ip~~~~~~l~~Ll~~cL~~dP~~RPs~~e  538 (558)
                      ....|.                                             .+..+++++.+||.+||..||.+|||+.|
T Consensus       246 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e  325 (388)
T 3oz6_A          246 VIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISAND  325 (388)
T ss_dssp             HHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred             hcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHH
Confidence            211110                                             12367899999999999999999999999


Q ss_pred             HHH
Q 008656          539 IIE  541 (558)
Q Consensus       539 ll~  541 (558)
                      +++
T Consensus       326 ~l~  328 (388)
T 3oz6_A          326 ALK  328 (388)
T ss_dssp             HTT
T ss_pred             HhC
Confidence            875


No 138
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00  E-value=4.9e-44  Score=358.69  Aligned_cols=252  Identities=25%  Similarity=0.418  Sum_probs=218.0

Q ss_pred             CCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeee--cCCCCcee
Q 008656          291 PKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGAC--TKPPSLCI  366 (558)
Q Consensus       291 ~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~--~~~~~~~l  366 (558)
                      .++|++.+.||+|+||.||++.+.  ++.||+|+++.........+.+.+|+.++++++||||+++++++  .....+|+
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence            357999999999999999999984  78899999987766677778899999999999999999999987  44667899


Q ss_pred             EEEecCCCCHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHCC-----ceeccCCCCcEEeCCCCcEEEEecCcce
Q 008656          367 VTEFMSGGSVYDYLHKLK---GVFKLPSLLKVAIDVSKGMNYLHQNN-----IIHRDLKAANLLMDENEVVKVADFGVAR  438 (558)
Q Consensus       367 V~E~~~ggsL~~~l~~~~---~~l~~~~~~~i~~qI~~aL~yLH~~g-----IiHrDLKp~NILl~~~~~vkL~DFG~a~  438 (558)
                      ||||++|++|.+++....   ..+++..++.++.||+.||.|||++|     |+||||||+||+++.++.+||+|||+++
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~  164 (279)
T 2w5a_A           85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR  164 (279)
T ss_dssp             EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred             EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence            999999999999997643   34899999999999999999999999     9999999999999999999999999997


Q ss_pred             ecccCC-ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHH
Q 008656          439 VKAQSG-VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPK  517 (558)
Q Consensus       439 ~~~~~~-~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~  517 (558)
                      ...... ......||+.|+|||++.+..++.++||||||+++|+|++|..||...+..+.... +..+..+.++..++++
T Consensus       165 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-i~~~~~~~~~~~~~~~  243 (279)
T 2w5a_A          165 ILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGK-IREGKFRRIPYRYSDE  243 (279)
T ss_dssp             HC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH-HHHTCCCCCCTTSCHH
T ss_pred             eeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHH-HhhcccccCCcccCHH
Confidence            654332 22345689999999999999999999999999999999999999998887665544 4445556788899999


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHHHH
Q 008656          518 LAELLERCWQQDPALRPDFSEIIEIL  543 (558)
Q Consensus       518 l~~Ll~~cL~~dP~~RPs~~ell~~L  543 (558)
                      +.++|.+||+.||.+||++.++++.+
T Consensus       244 l~~li~~~l~~~p~~Rps~~~ll~~~  269 (279)
T 2w5a_A          244 LNEIITRMLNLKDYHRPSVEEILENP  269 (279)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred             HHHHHHHHcCCCcccCCCHHHHHhCh
Confidence            99999999999999999999998643


No 139
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.5e-44  Score=386.73  Aligned_cols=253  Identities=17%  Similarity=0.297  Sum_probs=215.9

Q ss_pred             eeCCCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCC-ChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCc
Q 008656          288 EIDPKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERI-NSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSL  364 (558)
Q Consensus       288 ~i~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~-~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~  364 (558)
                      .+..++|++.+.||+|+||.||+++..  ++.||||+++.... .......+.+|+.++..++||||+++++++.+...+
T Consensus        57 ~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~  136 (412)
T 2vd5_A           57 RLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYL  136 (412)
T ss_dssp             SCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEE
T ss_pred             cCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEE
Confidence            455678999999999999999999984  78899999975321 112234588899999999999999999999999999


Q ss_pred             eeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccCC
Q 008656          365 CIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSG  444 (558)
Q Consensus       365 ~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~  444 (558)
                      |+||||++||+|.+++.+....+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+++......
T Consensus       137 ~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~  216 (412)
T 2vd5_A          137 YLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADG  216 (412)
T ss_dssp             EEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS
T ss_pred             EEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheeccCCC
Confidence            99999999999999998766689999999999999999999999999999999999999999999999999998765443


Q ss_pred             c--cccCCCCCCccchhhhc-------CCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCC---CCCCCC
Q 008656          445 V--MTAETGTYRWMAPEVIE-------HKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGL---RPTIPK  512 (558)
Q Consensus       445 ~--~~~~~gt~~y~APEv~~-------~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~---r~~ip~  512 (558)
                      .  .....||+.|+|||++.       ...|+.++|||||||++|||++|+.||...+..+....++....   .+..+.
T Consensus       217 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~  296 (412)
T 2vd5_A          217 TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDE  296 (412)
T ss_dssp             CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC----
T ss_pred             ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCcccc
Confidence            2  23458999999999997       46799999999999999999999999999988877766664322   233446


Q ss_pred             CCcHHHHHHHHHhhhcCCCCC---CCHHHHHH
Q 008656          513 NSQPKLAELLERCWQQDPALR---PDFSEIIE  541 (558)
Q Consensus       513 ~~~~~l~~Ll~~cL~~dP~~R---Ps~~ell~  541 (558)
                      .+++++.+||.+||. +|.+|   |++.|+++
T Consensus       297 ~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~  327 (412)
T 2vd5_A          297 GVPEEARDFIQRLLC-PPETRLGRGGAGDFRT  327 (412)
T ss_dssp             CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred             CCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence            899999999999999 99998   58888764


No 140
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00  E-value=1.8e-43  Score=357.38  Aligned_cols=248  Identities=23%  Similarity=0.409  Sum_probs=207.2

Q ss_pred             CceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeEEE
Q 008656          292 KHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTE  369 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV~E  369 (558)
                      ++|.+.++||+|+||.||+++..  ++.||+|++...... .....+.+|+.++++++||||+++++++......|+|||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e  100 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQ-VPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME  100 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCC-SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccc-hhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence            57999999999999999999974  678999998865432 235778999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEe---CCCCcEEEEecCcceecccC
Q 008656          370 FMSGGSVYDYLHKL---KGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM---DENEVVKVADFGVARVKAQS  443 (558)
Q Consensus       370 ~~~ggsL~~~l~~~---~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl---~~~~~vkL~DFG~a~~~~~~  443 (558)
                      |++|++|.+++...   ...+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+++.....
T Consensus       101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~  180 (285)
T 3is5_A          101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD  180 (285)
T ss_dssp             CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC----
T ss_pred             eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCc
Confidence            99999999998643   3679999999999999999999999999999999999999   45678999999999876655


Q ss_pred             CccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCC-CCCCCcHHHHHHH
Q 008656          444 GVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPT-IPKNSQPKLAELL  522 (558)
Q Consensus       444 ~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~-ip~~~~~~l~~Ll  522 (558)
                      .......||+.|+|||++. ..++.++||||||+++|+|++|+.||...+..+............. ....+++.+.+||
T Consensus       181 ~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  259 (285)
T 3is5_A          181 EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLL  259 (285)
T ss_dssp             ------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHHHHHHH
T ss_pred             ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCHHHHHHH
Confidence            5556678999999999986 4689999999999999999999999998887766555443332222 2234789999999


Q ss_pred             HHhhhcCCCCCCCHHHHHH
Q 008656          523 ERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       523 ~~cL~~dP~~RPs~~ell~  541 (558)
                      .+||+.||.+||++.|+++
T Consensus       260 ~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          260 KQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             HHHTCSCTTTSCCHHHHHT
T ss_pred             HHHccCChhhCcCHHHHhc
Confidence            9999999999999999874


No 141
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00  E-value=7.8e-44  Score=366.11  Aligned_cols=249  Identities=24%  Similarity=0.405  Sum_probs=197.8

Q ss_pred             CCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeEE
Q 008656          291 PKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVT  368 (558)
Q Consensus       291 ~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV~  368 (558)
                      .++|++.++||+|+||.||+|.+.  ++.||+|+++.... ......+.+|+.++++++||||+++++++..++.+|+||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   82 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE-EGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF   82 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCST-TCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccc-cccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence            357899999999999999999874  78899999976542 223367889999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccC
Q 008656          369 EFMSGGSVYDYLHKLK-----GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQS  443 (558)
Q Consensus       369 E~~~ggsL~~~l~~~~-----~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~  443 (558)
                      ||++ ++|.+++....     ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus        83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~  161 (317)
T 2pmi_A           83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIP  161 (317)
T ss_dssp             ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSC
T ss_pred             EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCC
Confidence            9996 69999997643     35899999999999999999999999999999999999999999999999999876433


Q ss_pred             -CccccCCCCCCccchhhhcC-CCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCC---------------
Q 008656          444 -GVMTAETGTYRWMAPEVIEH-KPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGL---------------  506 (558)
Q Consensus       444 -~~~~~~~gt~~y~APEv~~~-~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~---------------  506 (558)
                       .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+....+.....               
T Consensus       162 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  241 (317)
T 2pmi_A          162 VNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPK  241 (317)
T ss_dssp             CCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTT
T ss_pred             cccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhh
Confidence             23445678999999999976 4689999999999999999999999998887665554432110               


Q ss_pred             -----------------CCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          507 -----------------RPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       507 -----------------r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                                       .+..+..+++++.+||.+||+.||.+|||+.|+++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~  293 (317)
T 2pmi_A          242 YNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH  293 (317)
T ss_dssp             CCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             cccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence                             01122357889999999999999999999999874


No 142
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00  E-value=6e-44  Score=364.24  Aligned_cols=252  Identities=23%  Similarity=0.366  Sum_probs=209.1

Q ss_pred             eCCCceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCC---hHHHHHHHHHHHHHHhcc---CCCceEEEeeecC
Q 008656          289 IDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERIN---SDMQKEFAQEVFIMRKVR---HKNVVQFIGACTK  360 (558)
Q Consensus       289 i~~~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~---~~~~~~~~~Ev~iL~~l~---HpnIv~l~g~~~~  360 (558)
                      +..++|++.++||+|+||.||+|++  +++.||||+++.....   ......+.+|+.+++.++   ||||+++++++..
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~   85 (308)
T 3g33_A            6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT   85 (308)
T ss_dssp             ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred             ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence            3457899999999999999999995  5788999998753321   112345667777777765   9999999999866


Q ss_pred             CC-----CceeEEEecCCCCHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEec
Q 008656          361 PP-----SLCIVTEFMSGGSVYDYLHKLKG-VFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADF  434 (558)
Q Consensus       361 ~~-----~~~lV~E~~~ggsL~~~l~~~~~-~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DF  434 (558)
                      ..     .+++||||+. ++|.+++..... .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+||
T Consensus        86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Df  164 (308)
T 3g33_A           86 SRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADF  164 (308)
T ss_dssp             CCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSC
T ss_pred             cCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeC
Confidence            54     4799999995 699999976443 3999999999999999999999999999999999999999999999999


Q ss_pred             CcceecccCCccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCC-----
Q 008656          435 GVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPT-----  509 (558)
Q Consensus       435 G~a~~~~~~~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~-----  509 (558)
                      |+++............||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+....+......+.     
T Consensus       165 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  244 (308)
T 3g33_A          165 GLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP  244 (308)
T ss_dssp             SCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSC
T ss_pred             ccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcc
Confidence            999876665566677899999999999999999999999999999999999999999888776666543211110     


Q ss_pred             --------------------CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          510 --------------------IPKNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       510 --------------------ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                                          ....+++.+.+||.+||+.||.+|||+.|+++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  296 (308)
T 3g33_A          245 RDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ  296 (308)
T ss_dssp             SSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             chhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence                                12357789999999999999999999999875


No 143
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00  E-value=1.4e-43  Score=386.65  Aligned_cols=253  Identities=27%  Similarity=0.459  Sum_probs=216.4

Q ss_pred             CceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeEEE
Q 008656          292 KHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTE  369 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV~E  369 (558)
                      ++|+++++||+|+||.||++++.  +..||||+++...........+.+|+.+++.++||||+++++++.....+|+|||
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  116 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME  116 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence            47999999999999999999984  6789999998765444445778999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCC---CcEEEEecCcceecccCCcc
Q 008656          370 FMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN---EVVKVADFGVARVKAQSGVM  446 (558)
Q Consensus       370 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~---~~vkL~DFG~a~~~~~~~~~  446 (558)
                      |+.||+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++..   +.+||+|||+++........
T Consensus       117 ~~~~g~L~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~~  195 (494)
T 3lij_A          117 CYKGGELFDEIIH-RMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKM  195 (494)
T ss_dssp             CCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBCB
T ss_pred             cCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCccc
Confidence            9999999999876 4679999999999999999999999999999999999999764   45999999999887766666


Q ss_pred             ccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCC--CCCcHHHHHHHHH
Q 008656          447 TAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIP--KNSQPKLAELLER  524 (558)
Q Consensus       447 ~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip--~~~~~~l~~Ll~~  524 (558)
                      ....||+.|+|||++. ..|+.++|||||||++|+|++|..||...+..+....+.........+  ..+++.+.+||.+
T Consensus       196 ~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~  274 (494)
T 3lij_A          196 KERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQ  274 (494)
T ss_dssp             CCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCHHHHHHHHH
T ss_pred             cccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCCHHHHHHHHH
Confidence            6778999999999987 469999999999999999999999999998887777666554433322  5789999999999


Q ss_pred             hhhcCCCCCCCHHHHHH--HHHHH
Q 008656          525 CWQQDPALRPDFSEIIE--ILQQI  546 (558)
Q Consensus       525 cL~~dP~~RPs~~ell~--~L~~l  546 (558)
                      ||+.||.+|||+.++++  .|++.
T Consensus       275 ~L~~dp~~R~s~~e~l~hp~~~~~  298 (494)
T 3lij_A          275 MLQFDSQRRISAQQALEHPWIKEM  298 (494)
T ss_dssp             HTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred             HCCCChhhCccHHHHhcCcccccC
Confidence            99999999999999984  35544


No 144
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00  E-value=6.6e-44  Score=367.61  Aligned_cols=257  Identities=27%  Similarity=0.443  Sum_probs=205.7

Q ss_pred             eeeCCCceeeeeeeeecCceEEEEEEECCceEEEEEecCCCCChHHHHHHHHHHH--HHHhccCCCceEEEeee-----c
Q 008656          287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVF--IMRKVRHKNVVQFIGAC-----T  359 (558)
Q Consensus       287 ~~i~~~~~~i~~~LG~GsfG~Vy~g~~~~~~VAIKvlk~~~~~~~~~~~~~~Ev~--iL~~l~HpnIv~l~g~~-----~  359 (558)
                      +.++.++|++.+.||+|+||.||+|++.++.||||+++...     ...+..|..  .++.++||||+++++.+     .
T Consensus         8 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~   82 (336)
T 3g2f_A            8 PSLDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFAN-----RQNFINEKNIYRVPLMEHDNIARFIVGDERVTAD   82 (336)
T ss_dssp             -CCCTTSEEEEEEEEECSSEEEEEEEETTEEEEEEEEEGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTT
T ss_pred             CCcChHHhheeeecccCCCeEEEEEEECCeEEEEEEeeccc-----hhhHHHHHHHHHHHhccCcchhhheecccccccC
Confidence            46677899999999999999999999999999999997532     233444444  45568999999999743     3


Q ss_pred             CCCCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC---------CceeccCCCCcEEeCCCCcEE
Q 008656          360 KPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQN---------NIIHRDLKAANLLMDENEVVK  430 (558)
Q Consensus       360 ~~~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~---------gIiHrDLKp~NILl~~~~~vk  430 (558)
                      ....+|+||||++||+|.+++..  ...++..++.++.||+.||.|||++         ||+||||||+|||++.++.+|
T Consensus        83 ~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k  160 (336)
T 3g2f_A           83 GRMEYLLVMEYYPNGSLXKYLSL--HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCV  160 (336)
T ss_dssp             SCEEEEEEECCCTTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEE
T ss_pred             CCceEEEEEecCCCCcHHHHHhh--cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEE
Confidence            34457899999999999999965  4458899999999999999999999         999999999999999999999


Q ss_pred             EEecCcceecccCC---------ccccCCCCCCccchhhhcC-------CCCCchHHHHHHHHHHHHHHcCCCCCCCCC-
Q 008656          431 VADFGVARVKAQSG---------VMTAETGTYRWMAPEVIEH-------KPYDHKADVFSFGIVLWELLTGKLPYEYLT-  493 (558)
Q Consensus       431 L~DFG~a~~~~~~~---------~~~~~~gt~~y~APEv~~~-------~~~s~ksDVwSlGilL~elltG~~Pf~~~~-  493 (558)
                      |+|||+++......         ......||+.|+|||++.+       ..++.++|||||||++|||++|..||.... 
T Consensus       161 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~  240 (336)
T 3g2f_A          161 ISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGES  240 (336)
T ss_dssp             ECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSC
T ss_pred             EeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccc
Confidence            99999997654321         2234579999999999987       456789999999999999999977653211 


Q ss_pred             -----------------HHHHHHHHHhcCCCCCCCCC------CcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHH
Q 008656          494 -----------------PLQAAVGVVQKGLRPTIPKN------SQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKEV  550 (558)
Q Consensus       494 -----------------~~~~~~~v~~~~~r~~ip~~------~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~  550 (558)
                                       .......+.....++.+|..      +++.+.+||.+||..||.+|||+.|+++.|++++...
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~  320 (336)
T 3g2f_A          241 VPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIW  320 (336)
T ss_dssp             CCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCC
T ss_pred             hhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHH
Confidence                             11112222334445566554      3458999999999999999999999999999998654


No 145
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00  E-value=1.8e-43  Score=357.19  Aligned_cols=255  Identities=25%  Similarity=0.381  Sum_probs=214.1

Q ss_pred             CceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeee-cCCCCceeEE
Q 008656          292 KHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGAC-TKPPSLCIVT  368 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~-~~~~~~~lV~  368 (558)
                      ++|++.+.||+|+||.||+|++  .++.||||++......    ..+.+|+.+++.++|++++..++.+ ......++||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 3uzp_A            9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC----CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             cEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch----hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence            6899999999999999999996  5788999998765433    3588899999999998876666554 5666789999


Q ss_pred             EecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeC---CCCcEEEEecCcceecccCCc
Q 008656          369 EFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMD---ENEVVKVADFGVARVKAQSGV  445 (558)
Q Consensus       369 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~---~~~~vkL~DFG~a~~~~~~~~  445 (558)
                      ||+ +++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++   .++.+||+|||+++.......
T Consensus        85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~  163 (296)
T 3uzp_A           85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART  163 (296)
T ss_dssp             ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred             Eec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccc
Confidence            999 9999999987677899999999999999999999999999999999999994   788999999999986554322


Q ss_pred             --------cccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCH---HHHHHHHHhcCCC---CCCC
Q 008656          446 --------MTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTP---LQAAVGVVQKGLR---PTIP  511 (558)
Q Consensus       446 --------~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~---~~~~~~v~~~~~r---~~ip  511 (558)
                              .....||+.|+|||++.+..++.++||||||+++|+|++|+.||...+.   .+....+......   +..+
T Consensus       164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (296)
T 3uzp_A          164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC  243 (296)
T ss_dssp             CCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHT
T ss_pred             ccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHH
Confidence                    2455799999999999999999999999999999999999999986432   1122222221111   1234


Q ss_pred             CCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHH
Q 008656          512 KNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKEVY  551 (558)
Q Consensus       512 ~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~~  551 (558)
                      ..+++++.+++.+||+.||.+||++.++++.|+++.++..
T Consensus       244 ~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~  283 (296)
T 3uzp_A          244 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG  283 (296)
T ss_dssp             TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             hhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcC
Confidence            6789999999999999999999999999999999988764


No 146
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00  E-value=8.3e-44  Score=387.60  Aligned_cols=248  Identities=26%  Similarity=0.478  Sum_probs=216.2

Q ss_pred             CceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeEEE
Q 008656          292 KHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTE  369 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV~E  369 (558)
                      ++|++.++||+|+||.||++++.  ++.||||+++...........+.+|+.+|++++||||+++++++.....+|+|||
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  101 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE  101 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence            57999999999999999999984  7889999987543323335778999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeC---CCCcEEEEecCcceecccCCcc
Q 008656          370 FMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMD---ENEVVKVADFGVARVKAQSGVM  446 (558)
Q Consensus       370 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~---~~~~vkL~DFG~a~~~~~~~~~  446 (558)
                      |+.|++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++   .++.+||+|||+++........
T Consensus       102 ~~~~~~L~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~  180 (486)
T 3mwu_A          102 LYTGGELFDEIIK-RKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM  180 (486)
T ss_dssp             CCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC---
T ss_pred             cCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCcc
Confidence            9999999999976 46799999999999999999999999999999999999995   4567999999999876666556


Q ss_pred             ccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCC--CCCcHHHHHHHHH
Q 008656          447 TAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIP--KNSQPKLAELLER  524 (558)
Q Consensus       447 ~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip--~~~~~~l~~Ll~~  524 (558)
                      ....||+.|+|||++.+ .|+.++|||||||++|+|++|..||.+.+..+....+.........+  ..+++++.+||.+
T Consensus       181 ~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~  259 (486)
T 3mwu_A          181 KDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRK  259 (486)
T ss_dssp             -CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHHHHHHHH
T ss_pred             CCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHHHHHHHH
Confidence            67789999999999986 49999999999999999999999999998887777666554443333  4678999999999


Q ss_pred             hhhcCCCCCCCHHHHHH
Q 008656          525 CWQQDPALRPDFSEIIE  541 (558)
Q Consensus       525 cL~~dP~~RPs~~ell~  541 (558)
                      ||+.||.+|||+.++++
T Consensus       260 ~L~~dp~~R~t~~~~l~  276 (486)
T 3mwu_A          260 MLTFHPSLRITATQCLE  276 (486)
T ss_dssp             HTCSSTTTSCCHHHHHH
T ss_pred             HcCCChhhCcCHHHHhc
Confidence            99999999999999986


No 147
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00  E-value=6.9e-44  Score=365.22  Aligned_cols=246  Identities=24%  Similarity=0.411  Sum_probs=200.4

Q ss_pred             CceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCC-------
Q 008656          292 KHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPP-------  362 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~-------  362 (558)
                      ++|++.+.||+|+||.||+|++.  ++.||||+++... .....+.+.+|+.+|++++||||+++++++....       
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   84 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE   84 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS-TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC-chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence            47899999999999999999984  7889999998654 3345678999999999999999999999875433       


Q ss_pred             --------------------------------------------------CceeEEEecCCCCHHHHHHhhc--cCCCHH
Q 008656          363 --------------------------------------------------SLCIVTEFMSGGSVYDYLHKLK--GVFKLP  390 (558)
Q Consensus       363 --------------------------------------------------~~~lV~E~~~ggsL~~~l~~~~--~~l~~~  390 (558)
                                                                        .+++||||++|++|.+++....  ...++.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~  164 (332)
T 3qd2_B           85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG  164 (332)
T ss_dssp             HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred             hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence                                                              2799999999999999997643  235566


Q ss_pred             HHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccCC-------------ccccCCCCCCccc
Q 008656          391 SLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSG-------------VMTAETGTYRWMA  457 (558)
Q Consensus       391 ~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~-------------~~~~~~gt~~y~A  457 (558)
                      .++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......             ......||+.|+|
T Consensus       165 ~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  244 (332)
T 3qd2_B          165 VCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMS  244 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSC
T ss_pred             HHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccC
Confidence            789999999999999999999999999999999999999999999998665432             2234579999999


Q ss_pred             hhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHH
Q 008656          458 PEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELLERCWQQDPALRPDFS  537 (558)
Q Consensus       458 PEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~  537 (558)
                      ||++.+..++.++||||||+++|+|++|..|+..   .............+..+...++.+.+||.+||+.||.+||++.
T Consensus       245 PE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~  321 (332)
T 3qd2_B          245 PEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME---RVRIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEAT  321 (332)
T ss_dssp             HHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH---HHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHHCSSGGGSCCHH
T ss_pred             hHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH---HHHHHHHhhccCCCcccccCChhHHHHHHHHccCCCCcCCCHH
Confidence            9999999999999999999999999998776421   1111222222222333345668899999999999999999999


Q ss_pred             HHHH
Q 008656          538 EIIE  541 (558)
Q Consensus       538 ell~  541 (558)
                      |+++
T Consensus       322 ~~l~  325 (332)
T 3qd2_B          322 DIIE  325 (332)
T ss_dssp             HHHH
T ss_pred             HHhh
Confidence            9875


No 148
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00  E-value=6.9e-44  Score=388.24  Aligned_cols=249  Identities=27%  Similarity=0.519  Sum_probs=221.1

Q ss_pred             CCCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCC-hHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCcee
Q 008656          290 DPKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERIN-SDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCI  366 (558)
Q Consensus       290 ~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~-~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~l  366 (558)
                      ..++|++++.||+|+||.||+|++.  ++.||||+++..... .+....+.+|+.+++.++||||+++++++..+..+|+
T Consensus        14 ~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~l   93 (476)
T 2y94_A           14 KIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFM   93 (476)
T ss_dssp             EETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             eecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            3468999999999999999999984  789999999754221 1234678999999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccCCcc
Q 008656          367 VTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVM  446 (558)
Q Consensus       367 V~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~  446 (558)
                      ||||++|++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++........
T Consensus        94 v~E~~~gg~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~  172 (476)
T 2y94_A           94 VMEYVSGGELFDYICK-NGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL  172 (476)
T ss_dssp             EEECCSSEEHHHHTTS-SSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCB
T ss_pred             EEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhccccccc
Confidence            9999999999999976 567999999999999999999999999999999999999999999999999999887666566


Q ss_pred             ccCCCCCCccchhhhcCCCC-CchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHh
Q 008656          447 TAETGTYRWMAPEVIEHKPY-DHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELLERC  525 (558)
Q Consensus       447 ~~~~gt~~y~APEv~~~~~~-s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~~Ll~~c  525 (558)
                      ....||+.|+|||++.+..+ +.++|||||||++|+|++|..||...+.......+...  ....|..+++++.+||.+|
T Consensus       173 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~Li~~~  250 (476)
T 2y94_A          173 RTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDG--IFYTPQYLNPSVISLLKHM  250 (476)
T ss_dssp             CCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTT--CCCCCTTCCHHHHHHHHHH
T ss_pred             cccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcC--CcCCCccCCHHHHHHHHHH
Confidence            67789999999999998876 68999999999999999999999988776666555443  3456778999999999999


Q ss_pred             hhcCCCCCCCHHHHHH
Q 008656          526 WQQDPALRPDFSEIIE  541 (558)
Q Consensus       526 L~~dP~~RPs~~ell~  541 (558)
                      |..||.+|||+.++++
T Consensus       251 L~~dP~~Rpt~~eil~  266 (476)
T 2y94_A          251 LQVDPMKRATIKDIRE  266 (476)
T ss_dssp             TCSSTTTSCCHHHHHT
T ss_pred             cCCCchhCcCHHHHHh
Confidence            9999999999999986


No 149
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00  E-value=1.2e-43  Score=356.71  Aligned_cols=249  Identities=27%  Similarity=0.473  Sum_probs=214.7

Q ss_pred             CCCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCC-hHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCcee
Q 008656          290 DPKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERIN-SDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCI  366 (558)
Q Consensus       290 ~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~-~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~l  366 (558)
                      ..++|++.+.||+|+||.||++.+.  ++.||+|++...... ......+.+|+.++++++||||+++++++......++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   86 (279)
T 3fdn_A            7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL   86 (279)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence            4468999999999999999999985  567999998653221 1234678899999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccCCcc
Q 008656          367 VTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVM  446 (558)
Q Consensus       367 V~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~  446 (558)
                      ||||+++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...... ..
T Consensus        87 v~e~~~~~~l~~~l~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~-~~  164 (279)
T 3fdn_A           87 ILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RR  164 (279)
T ss_dssp             EECCCTTEEHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC------
T ss_pred             EEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCcc-cc
Confidence            9999999999999976 467999999999999999999999999999999999999999999999999998544332 23


Q ss_pred             ccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhh
Q 008656          447 TAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELLERCW  526 (558)
Q Consensus       447 ~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~~Ll~~cL  526 (558)
                      ....||+.|+|||++.+..++.++||||||+++|+|++|..||...+..+....+..  ....+|..+++.+.+||.+||
T Consensus       165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l  242 (279)
T 3fdn_A          165 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDFVTEGARDLISRLL  242 (279)
T ss_dssp             ---CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH--TCCCCCTTSCHHHHHHHHHHC
T ss_pred             cccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHh--CCCCCCCcCCHHHHHHHHHHh
Confidence            455789999999999999999999999999999999999999998887766655443  344577889999999999999


Q ss_pred             hcCCCCCCCHHHHHHH
Q 008656          527 QQDPALRPDFSEIIEI  542 (558)
Q Consensus       527 ~~dP~~RPs~~ell~~  542 (558)
                      +.||.+||++.|+++.
T Consensus       243 ~~~p~~Rps~~e~l~h  258 (279)
T 3fdn_A          243 KHNPSQRPMLREVLEH  258 (279)
T ss_dssp             CSSGGGSCCHHHHHHC
T ss_pred             ccChhhCCCHHHHhhC
Confidence            9999999999999863


No 150
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00  E-value=2.5e-43  Score=385.71  Aligned_cols=248  Identities=25%  Similarity=0.433  Sum_probs=215.3

Q ss_pred             CceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCCh-----------HHHHHHHHHHHHHHhccCCCceEEEeee
Q 008656          292 KHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINS-----------DMQKEFAQEVFIMRKVRHKNVVQFIGAC  358 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~-----------~~~~~~~~Ev~iL~~l~HpnIv~l~g~~  358 (558)
                      ++|+++++||+|+||.||+|++.  ++.||||+++......           .....+.+|+.+|++++||||+++++++
T Consensus        36 ~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~  115 (504)
T 3q5i_A           36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVF  115 (504)
T ss_dssp             GTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             cceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            67999999999999999999984  6789999998654321           2356789999999999999999999999


Q ss_pred             cCCCCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCC---cEEEEecC
Q 008656          359 TKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENE---VVKVADFG  435 (558)
Q Consensus       359 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~---~vkL~DFG  435 (558)
                      .....+|+||||++||+|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++   .+||+|||
T Consensus       116 ~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg  194 (504)
T 3q5i_A          116 EDKKYFYLVTEFYEGGELFEQIIN-RHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFG  194 (504)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHH-HSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCT
T ss_pred             EcCCEEEEEEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECC
Confidence            999999999999999999999976 56799999999999999999999999999999999999999776   69999999


Q ss_pred             cceecccCCccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCC--CCC
Q 008656          436 VARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTI--PKN  513 (558)
Q Consensus       436 ~a~~~~~~~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~i--p~~  513 (558)
                      +++............||+.|+|||++.+ .|+.++|||||||++|+|++|..||.+.+..+....+.........  ...
T Consensus       195 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  273 (504)
T 3q5i_A          195 LSSFFSKDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKN  273 (504)
T ss_dssp             TCEECCTTSCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTT
T ss_pred             CCEEcCCCCccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCC
Confidence            9988776666677789999999999874 6999999999999999999999999999888777666654433222  257


Q ss_pred             CcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          514 SQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       514 ~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                      +++++.+||.+||..||.+|||+.|+++
T Consensus       274 ~s~~~~~li~~~L~~dp~~R~t~~e~l~  301 (504)
T 3q5i_A          274 ISDEAKELIKLMLTYDYNKRCTAEEALN  301 (504)
T ss_dssp             SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            8999999999999999999999999874


No 151
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00  E-value=3.7e-43  Score=351.86  Aligned_cols=243  Identities=23%  Similarity=0.380  Sum_probs=211.5

Q ss_pred             CceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhc-cCCCceEEEeeecCCCCceeEE
Q 008656          292 KHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKV-RHKNVVQFIGACTKPPSLCIVT  368 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l-~HpnIv~l~g~~~~~~~~~lV~  368 (558)
                      ++|++.+.||+|+||.||+|.+.  ++.||||+++...........+.+|+.++..+ +||||+++++++..++..++||
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~   90 (289)
T 1x8b_A           11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQN   90 (289)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEE
T ss_pred             chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            57999999999999999999984  78899999987665566677899999999999 8999999999999999999999


Q ss_pred             EecCCCCHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCC-------------------
Q 008656          369 EFMSGGSVYDYLHKLK---GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN-------------------  426 (558)
Q Consensus       369 E~~~ggsL~~~l~~~~---~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~-------------------  426 (558)
                      ||++|++|.+++....   +.+++..++.++.||+.||.|||++||+||||||+|||++.+                   
T Consensus        91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~  170 (289)
T 1x8b_A           91 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNK  170 (289)
T ss_dssp             ECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------C
T ss_pred             EecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCc
Confidence            9999999999997642   568999999999999999999999999999999999999844                   


Q ss_pred             CcEEEEecCcceecccCCccccCCCCCCccchhhhcCC-CCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcC
Q 008656          427 EVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHK-PYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKG  505 (558)
Q Consensus       427 ~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~APEv~~~~-~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~  505 (558)
                      ..+||+|||.+......   ....||+.|+|||++.+. .++.++||||||+++|+|++|..|+......    ..+..+
T Consensus       171 ~~~kl~Dfg~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~----~~~~~~  243 (289)
T 1x8b_A          171 VMFKIGDLGHVTRISSP---QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQW----HEIRQG  243 (289)
T ss_dssp             CCEEECCCTTCEETTCS---CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHH----HHHHTT
T ss_pred             eEEEEcccccccccCCc---cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHH----HHHHcC
Confidence            47999999999866543   234699999999999876 6778999999999999999998877554332    223445


Q ss_pred             CCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          506 LRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       506 ~r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                      ..+.++..+++.+.+||.+||..||.+||++.++++
T Consensus       244 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  279 (289)
T 1x8b_A          244 RLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK  279 (289)
T ss_dssp             CCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence            567788899999999999999999999999999874


No 152
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00  E-value=2.4e-43  Score=365.23  Aligned_cols=248  Identities=26%  Similarity=0.445  Sum_probs=220.3

Q ss_pred             CCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCC-ChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeE
Q 008656          291 PKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERI-NSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIV  367 (558)
Q Consensus       291 ~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~-~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV  367 (558)
                      ..+|++.+.||+|+||.||++.+.  ++.||+|++..... .......+.+|+.+++.++||||+++++++...+.+|+|
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  119 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV  119 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence            468999999999999999999985  67899999876543 345567899999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccC-Ccc
Q 008656          368 TEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQS-GVM  446 (558)
Q Consensus       368 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~-~~~  446 (558)
                      |||+.|++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..... ...
T Consensus       120 ~e~~~~~~L~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~  198 (335)
T 2owb_A          120 LELCRRRSLLELHKR-RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK  198 (335)
T ss_dssp             ECCCTTCBHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCB
T ss_pred             EecCCCCCHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCcccc
Confidence            999999999999876 567999999999999999999999999999999999999999999999999999865433 234


Q ss_pred             ccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhh
Q 008656          447 TAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELLERCW  526 (558)
Q Consensus       447 ~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~~Ll~~cL  526 (558)
                      ....||+.|+|||++.+..++.++||||||+++|+|++|..||......+....+...  ...++..+++.+.+||.+||
T Consensus       199 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l  276 (335)
T 2owb_A          199 KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN--EYSIPKHINPVAASLIQKML  276 (335)
T ss_dssp             CCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHT--CCCCCTTSCHHHHHHHHHHT
T ss_pred             cccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcC--CCCCCccCCHHHHHHHHHHc
Confidence            4567999999999999999999999999999999999999999988776666555443  34577889999999999999


Q ss_pred             hcCCCCCCCHHHHHH
Q 008656          527 QQDPALRPDFSEIIE  541 (558)
Q Consensus       527 ~~dP~~RPs~~ell~  541 (558)
                      +.||.+||++.++++
T Consensus       277 ~~dp~~Rps~~ell~  291 (335)
T 2owb_A          277 QTDPTARPTINELLN  291 (335)
T ss_dssp             CSSGGGSCCGGGGGG
T ss_pred             cCChhHCcCHHHHhc
Confidence            999999999999875


No 153
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00  E-value=2.2e-43  Score=356.08  Aligned_cols=256  Identities=25%  Similarity=0.378  Sum_probs=211.9

Q ss_pred             CceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeee-cCCCCceeEE
Q 008656          292 KHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGAC-TKPPSLCIVT  368 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~-~~~~~~~lV~  368 (558)
                      ++|++.+.||+|+||.||+|++  .++.||||++......    ..+.+|+.+++.++|++++..++.+ ......++||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 4hgt_A            9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             --CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C----CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             CceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc----hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence            6799999999999999999996  5788999987654322    3578899999999988877766655 5667789999


Q ss_pred             EecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEe---CCCCcEEEEecCcceecccCCc
Q 008656          369 EFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM---DENEVVKVADFGVARVKAQSGV  445 (558)
Q Consensus       369 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl---~~~~~vkL~DFG~a~~~~~~~~  445 (558)
                      ||+ +++|.+++......+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+++.......
T Consensus        85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~  163 (296)
T 4hgt_A           85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART  163 (296)
T ss_dssp             ECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred             Ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCccc
Confidence            999 999999998767789999999999999999999999999999999999999   7889999999999986554321


Q ss_pred             --------cccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHH---HHHHHHHhcCCC---CCCC
Q 008656          446 --------MTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPL---QAAVGVVQKGLR---PTIP  511 (558)
Q Consensus       446 --------~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~---~~~~~v~~~~~r---~~ip  511 (558)
                              .....||+.|+|||++.+..++.++|||||||++|+|++|+.||...+..   +....+......   +...
T Consensus       164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (296)
T 4hgt_A          164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC  243 (296)
T ss_dssp             CCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHT
T ss_pred             CccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhh
Confidence                    23457899999999999999999999999999999999999999765321   112222211111   1233


Q ss_pred             CCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHh
Q 008656          512 KNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKEVYS  552 (558)
Q Consensus       512 ~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~~~  552 (558)
                      ..+++++.+||.+||+.||.+||++.++++.|+++.++...
T Consensus       244 ~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~  284 (296)
T 4hgt_A          244 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF  284 (296)
T ss_dssp             TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTC
T ss_pred             ccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCC
Confidence            67789999999999999999999999999999999988754


No 154
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00  E-value=2.8e-43  Score=380.23  Aligned_cols=253  Identities=24%  Similarity=0.329  Sum_probs=193.2

Q ss_pred             ceeeCCCceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeec----
Q 008656          286 VWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACT----  359 (558)
Q Consensus       286 ~~~i~~~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~----  359 (558)
                      .|.+. ++|+++++||+|+||.||+|.+  +++.||||++..........+.+.+|+.+|++++||||+++++++.    
T Consensus        48 ~~~~~-~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  126 (458)
T 3rp9_A           48 DWQIP-DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDV  126 (458)
T ss_dssp             SCCSC-TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCT
T ss_pred             cCccC-CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCc
Confidence            34443 7899999999999999999987  4788999999876556666788999999999999999999999984    


Q ss_pred             -CCCCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcce
Q 008656          360 -KPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR  438 (558)
Q Consensus       360 -~~~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~  438 (558)
                       ....+|+||||+ +++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++
T Consensus       127 ~~~~~~~lv~e~~-~~~L~~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~  204 (458)
T 3rp9_A          127 EKFDELYVVLEIA-DSDFKKLFRT-PVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLAR  204 (458)
T ss_dssp             TTCCCEEEEECCC-SEEHHHHHHS-SCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred             ccCceEEEEEecc-ccchhhhccc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccch
Confidence             335689999998 6799999976 5679999999999999999999999999999999999999999999999999998


Q ss_pred             ecccC----------------------------CccccCCCCCCccchhhh-cCCCCCchHHHHHHHHHHHHHHc-----
Q 008656          439 VKAQS----------------------------GVMTAETGTYRWMAPEVI-EHKPYDHKADVFSFGIVLWELLT-----  484 (558)
Q Consensus       439 ~~~~~----------------------------~~~~~~~gt~~y~APEv~-~~~~~s~ksDVwSlGilL~ellt-----  484 (558)
                      .....                            ...+..+||+.|+|||++ .+..|+.++|||||||+||||++     
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~  284 (458)
T 3rp9_A          205 TVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKEN  284 (458)
T ss_dssp             CTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTT
T ss_pred             hccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccc
Confidence            65422                            123455789999999987 56779999999999999999998     


Q ss_pred             ------CCCCCCCCCHH--------------------HHHHHHHh----------------------cCCC-------CC
Q 008656          485 ------GKLPYEYLTPL--------------------QAAVGVVQ----------------------KGLR-------PT  509 (558)
Q Consensus       485 ------G~~Pf~~~~~~--------------------~~~~~v~~----------------------~~~r-------~~  509 (558)
                            |+.+|.+.+..                    .....+..                      ..+.       ..
T Consensus       285 ~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  364 (458)
T 3rp9_A          285 VAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAE  364 (458)
T ss_dssp             CSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGG
T ss_pred             ccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHH
Confidence                  67777654311                    11111100                      0000       01


Q ss_pred             CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          510 IPKNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       510 ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                      .....++++.+||.+||..||.+|||+.|+++
T Consensus       365 ~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~  396 (458)
T 3rp9_A          365 RFPASSADAIHLLKRMLVFNPNKRITINECLA  396 (458)
T ss_dssp             GSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HCCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence            12356899999999999999999999999876


No 155
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=1e-43  Score=367.49  Aligned_cols=251  Identities=26%  Similarity=0.427  Sum_probs=211.6

Q ss_pred             CCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCC---CChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCce
Q 008656          291 PKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPER---INSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLC  365 (558)
Q Consensus       291 ~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~---~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~  365 (558)
                      .++|++.+.||+|+||.||+|.+.  ++.||+|+++...   ........+.+|+.++++++||||+++++++...+..|
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  104 (345)
T 3hko_A           25 QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYIC  104 (345)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEE
Confidence            368999999999999999999884  5679999987542   23345678999999999999999999999999999999


Q ss_pred             eEEEecCCCCHHHHHHhh---------------------------------------ccCCCHHHHHHHHHHHHHHHHHH
Q 008656          366 IVTEFMSGGSVYDYLHKL---------------------------------------KGVFKLPSLLKVAIDVSKGMNYL  406 (558)
Q Consensus       366 lV~E~~~ggsL~~~l~~~---------------------------------------~~~l~~~~~~~i~~qI~~aL~yL  406 (558)
                      +||||++||+|.+++...                                       ...+++..++.++.||+.||.||
T Consensus       105 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L  184 (345)
T 3hko_A          105 LVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYL  184 (345)
T ss_dssp             EEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence            999999999999998521                                       11245677889999999999999


Q ss_pred             HHCCceeccCCCCcEEeCCCC--cEEEEecCcceecccCC-----ccccCCCCCCccchhhhcC--CCCCchHHHHHHHH
Q 008656          407 HQNNIIHRDLKAANLLMDENE--VVKVADFGVARVKAQSG-----VMTAETGTYRWMAPEVIEH--KPYDHKADVFSFGI  477 (558)
Q Consensus       407 H~~gIiHrDLKp~NILl~~~~--~vkL~DFG~a~~~~~~~-----~~~~~~gt~~y~APEv~~~--~~~s~ksDVwSlGi  477 (558)
                      |++||+||||||+|||++.++  .+||+|||+++......     ......||+.|+|||++.+  ..++.++||||||+
T Consensus       185 H~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~  264 (345)
T 3hko_A          185 HNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGV  264 (345)
T ss_dssp             HHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHH
T ss_pred             HHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHH
Confidence            999999999999999998776  89999999998653321     2345679999999999975  78999999999999


Q ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCC--CCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          478 VLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPK--NSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       478 lL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~--~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                      ++|+|++|+.||...+..+....+.........+.  .+++.+.+||.+||+.||.+||++.++++
T Consensus       265 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~  330 (345)
T 3hko_A          265 LLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQ  330 (345)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred             HHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            99999999999999998888877776655443332  47899999999999999999999999975


No 156
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3.6e-43  Score=369.55  Aligned_cols=251  Identities=27%  Similarity=0.409  Sum_probs=210.3

Q ss_pred             CceeeCCCceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCC
Q 008656          285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPP  362 (558)
Q Consensus       285 ~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~  362 (558)
                      ..|++. ++|++.+.||+|+||.||+|.+  +++.||||++..........+.+.+|+.+|+.++||||+++++++....
T Consensus        19 ~~~~~~-~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~   97 (367)
T 1cm8_A           19 TAWEVR-AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDE   97 (367)
T ss_dssp             SEECCB-SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCS
T ss_pred             ceeeec-ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCC
Confidence            355553 7899999999999999999997  4788999999776556666788999999999999999999999987653


Q ss_pred             ------CceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCc
Q 008656          363 ------SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGV  436 (558)
Q Consensus       363 ------~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~  436 (558)
                            .+|+||||+ |++|.+++..  +.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus        98 ~~~~~~~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~  174 (367)
T 1cm8_A           98 TLDDFTDFYLVMPFM-GTDLGKLMKH--EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGL  174 (367)
T ss_dssp             STTTCCCCEEEEECC-SEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred             ccccCceEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeec
Confidence                  469999999 8899999975  5789999999999999999999999999999999999999999999999999


Q ss_pred             ceecccCCccccCCCCCCccchhhhcC-CCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCC--------
Q 008656          437 ARVKAQSGVMTAETGTYRWMAPEVIEH-KPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLR--------  507 (558)
Q Consensus       437 a~~~~~~~~~~~~~gt~~y~APEv~~~-~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r--------  507 (558)
                      ++....  ..+...||+.|+|||++.+ ..|+.++|||||||++|+|++|+.||.+.+..+....+......        
T Consensus       175 a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~  252 (367)
T 1cm8_A          175 ARQADS--EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQR  252 (367)
T ss_dssp             CEECCS--SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHT
T ss_pred             cccccc--ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence            986543  3456689999999999987 78999999999999999999999999988776655444321111        


Q ss_pred             ---------------------CCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          508 ---------------------PTIPKNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       508 ---------------------~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                                           ..+....++.+.+||.+||..||.+|||+.++++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~  307 (367)
T 1cm8_A          253 LQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA  307 (367)
T ss_dssp             CSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             hhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence                                 1133567899999999999999999999999976


No 157
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00  E-value=3.3e-43  Score=355.41  Aligned_cols=251  Identities=29%  Similarity=0.547  Sum_probs=216.1

Q ss_pred             eeCCCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecC----C
Q 008656          288 EIDPKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTK----P  361 (558)
Q Consensus       288 ~i~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~----~  361 (558)
                      ..+...|++.+.||+|+||.||+|.+.  +..||+|++............+.+|+.++++++||||+++++++..    .
T Consensus        22 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~  101 (290)
T 1t4h_A           22 SNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGK  101 (290)
T ss_dssp             CTTSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSC
T ss_pred             ccCceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCC
Confidence            345567899999999999999999984  5679999998777777777889999999999999999999998753    4


Q ss_pred             CCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCcEEeC-CCCcEEEEecCcce
Q 008656          362 PSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN--IIHRDLKAANLLMD-ENEVVKVADFGVAR  438 (558)
Q Consensus       362 ~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~g--IiHrDLKp~NILl~-~~~~vkL~DFG~a~  438 (558)
                      ..+|+||||+++++|.+++.. .+.+++..++.++.||+.||.|||++|  |+||||||+|||++ .++.+||+|||++.
T Consensus       102 ~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~  180 (290)
T 1t4h_A          102 KCIVLVTELMTSGTLKTYLKR-FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT  180 (290)
T ss_dssp             EEEEEEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred             ceEEEEEEecCCCCHHHHHHH-ccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcc
Confidence            568999999999999999976 467899999999999999999999999  99999999999998 78999999999996


Q ss_pred             ecccCCccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCC-CCCCCCCcHH
Q 008656          439 VKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLR-PTIPKNSQPK  517 (558)
Q Consensus       439 ~~~~~~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r-~~ip~~~~~~  517 (558)
                      ..... ......||+.|+|||++.+ .++.++||||||+++|+|++|..||...............+.. ...+...+++
T Consensus       181 ~~~~~-~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (290)
T 1t4h_A          181 LKRAS-FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPE  258 (290)
T ss_dssp             GCCTT-SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHH
T ss_pred             ccccc-ccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCHH
Confidence            54433 3345579999999999875 4999999999999999999999999886665555554444433 3456677899


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          518 LAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       518 l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                      +.+||.+||+.||.+|||+.++++
T Consensus       259 l~~li~~~l~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          259 VKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHccCChhhCCCHHHHhh
Confidence            999999999999999999999875


No 158
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00  E-value=1.6e-44  Score=375.61  Aligned_cols=258  Identities=22%  Similarity=0.329  Sum_probs=204.9

Q ss_pred             eeeCCCceeeeeeeeecCceEEEEEEEC-----CceEEEEEecCCCCChH---------HHHHHHHHHHHHHhccCCCce
Q 008656          287 WEIDPKHLKFGSKVASGSYGDLYRGTYC-----SQDVAIKVLKPERINSD---------MQKEFAQEVFIMRKVRHKNVV  352 (558)
Q Consensus       287 ~~i~~~~~~i~~~LG~GsfG~Vy~g~~~-----~~~VAIKvlk~~~~~~~---------~~~~~~~Ev~iL~~l~HpnIv  352 (558)
                      -++..++|++.+.||+|+||.||+|.+.     +..||||++........         ....+.+|+.+++.++||||+
T Consensus        32 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~  111 (345)
T 2v62_A           32 DDMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIP  111 (345)
T ss_dssp             ECTTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCC
T ss_pred             ccccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcc
Confidence            3456789999999999999999999984     46799999876532110         113466788999999999999


Q ss_pred             EEEeeecC----CCCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCC-
Q 008656          353 QFIGACTK----PPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENE-  427 (558)
Q Consensus       353 ~l~g~~~~----~~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~-  427 (558)
                      ++++++..    ....|+||||+ |++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++ 
T Consensus       112 ~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~  189 (345)
T 2v62_A          112 LFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQ-NGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNP  189 (345)
T ss_dssp             CEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBG-GGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSST
T ss_pred             eeecccccccCCCcEEEEEEecc-CCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCC
Confidence            99999876    67899999999 9999999976 34899999999999999999999999999999999999999877 


Q ss_pred             -cEEEEecCcceecccCC--------ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q 008656          428 -VVKVADFGVARVKAQSG--------VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAA  498 (558)
Q Consensus       428 -~vkL~DFG~a~~~~~~~--------~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~  498 (558)
                       .+||+|||+++......        ......||+.|+|||++.+..++.++|||||||++|+|++|..||.........
T Consensus       190 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~  269 (345)
T 2v62_A          190 DQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVA  269 (345)
T ss_dssp             TSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHH
T ss_pred             CcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHH
Confidence             99999999997654321        124557999999999999999999999999999999999999999652211111


Q ss_pred             HHHHhcCCCCCCC---------CCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHH
Q 008656          499 VGVVQKGLRPTIP---------KNSQPKLAELLERCWQQDPALRPDFSEIIEILQQI  546 (558)
Q Consensus       499 ~~v~~~~~r~~ip---------~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l  546 (558)
                      ...........++         ..+++++.++|.+||..||.+||++.++++.|+++
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~  326 (345)
T 2v62_A          270 VQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPH  326 (345)
T ss_dssp             HHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTT
T ss_pred             HHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhcc
Confidence            1111111122222         27889999999999999999999999999998865


No 159
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00  E-value=1e-43  Score=386.29  Aligned_cols=249  Identities=24%  Similarity=0.458  Sum_probs=221.2

Q ss_pred             CCceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeE
Q 008656          291 PKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERIN-SDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIV  367 (558)
Q Consensus       291 ~~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~-~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV  367 (558)
                      .++|++.++||+|+||.||+++.  +++.||||++...... ......+.+|+.++++++||||+++++++.....+|+|
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  104 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV  104 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            36899999999999999999998  4788999999765432 23457799999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEe---CCCCcEEEEecCcceecccCC
Q 008656          368 TEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM---DENEVVKVADFGVARVKAQSG  444 (558)
Q Consensus       368 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl---~~~~~vkL~DFG~a~~~~~~~  444 (558)
                      |||+.|++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+++......
T Consensus       105 ~e~~~~~~L~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~  183 (484)
T 3nyv_A          105 GEVYTGGELFDEIIS-RKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK  183 (484)
T ss_dssp             ECCCCSCBHHHHHHT-CSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCC
T ss_pred             EecCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccc
Confidence            999999999999976 5679999999999999999999999999999999999999   467899999999998766665


Q ss_pred             ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCC--CCCcHHHHHHH
Q 008656          445 VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIP--KNSQPKLAELL  522 (558)
Q Consensus       445 ~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip--~~~~~~l~~Ll  522 (558)
                      ......||+.|+|||++.+ .|+.++|||||||++|+|++|..||...+..+....+.........+  ..+++.+.+||
T Consensus       184 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li  262 (484)
T 3nyv_A          184 KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLI  262 (484)
T ss_dssp             SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHHHHHHH
T ss_pred             ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHHHHHHH
Confidence            5666789999999999977 69999999999999999999999999999888777766655444333  46889999999


Q ss_pred             HHhhhcCCCCCCCHHHHHH
Q 008656          523 ERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       523 ~~cL~~dP~~RPs~~ell~  541 (558)
                      .+||+.||.+|||+.++++
T Consensus       263 ~~~L~~dp~~R~s~~e~l~  281 (484)
T 3nyv_A          263 RKMLTYVPSMRISARDALD  281 (484)
T ss_dssp             HHHTCSSGGGSCCHHHHHT
T ss_pred             HHHCCCChhHCcCHHHHhh
Confidence            9999999999999999984


No 160
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00  E-value=1e-43  Score=367.07  Aligned_cols=249  Identities=22%  Similarity=0.364  Sum_probs=202.0

Q ss_pred             CCceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeEE
Q 008656          291 PKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVT  368 (558)
Q Consensus       291 ~~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV~  368 (558)
                      .++|++.++||+|+||.||++.+  .++.||||+++...........+.+|+.++++++||||+++++++..+..+|+||
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  112 (329)
T 3gbz_A           33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIF  112 (329)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEE
Confidence            35899999999999999999987  4788999999876655555677889999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeC-----CCCcEEEEecCcceecccC
Q 008656          369 EFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMD-----ENEVVKVADFGVARVKAQS  443 (558)
Q Consensus       369 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~-----~~~~vkL~DFG~a~~~~~~  443 (558)
                      ||++ ++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++     .++.+||+|||+++.....
T Consensus       113 e~~~-~~L~~~~~~-~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~  190 (329)
T 3gbz_A          113 EYAE-NDLKKYMDK-NPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIP  190 (329)
T ss_dssp             ECCS-EEHHHHHHH-CTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC--
T ss_pred             ecCC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCc
Confidence            9996 599999976 45699999999999999999999999999999999999994     5556999999999765432


Q ss_pred             -CccccCCCCCCccchhhhcCC-CCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCC------------
Q 008656          444 -GVMTAETGTYRWMAPEVIEHK-PYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPT------------  509 (558)
Q Consensus       444 -~~~~~~~gt~~y~APEv~~~~-~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~------------  509 (558)
                       .......||+.|+|||++.+. .++.++|||||||++|+|++|..||...+..+....+......+.            
T Consensus       191 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (329)
T 3gbz_A          191 IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPD  270 (329)
T ss_dssp             ---------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred             ccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhh
Confidence             334556789999999999874 589999999999999999999999999888777666553211111            


Q ss_pred             ----C------------CCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          510 ----I------------PKNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       510 ----i------------p~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                          .            +..+++++.+||.+||+.||.+|||+.|+++
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  318 (329)
T 3gbz_A          271 WKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE  318 (329)
T ss_dssp             CCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             hhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence                0            1126789999999999999999999999875


No 161
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00  E-value=2.4e-43  Score=361.92  Aligned_cols=260  Identities=26%  Similarity=0.434  Sum_probs=202.7

Q ss_pred             CCceeeCCCceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCChHHHHHHHHHHHHHHhcc-CCCceEEEeee--
Q 008656          284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVR-HKNVVQFIGAC--  358 (558)
Q Consensus       284 ~~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~-HpnIv~l~g~~--  358 (558)
                      ...+++...+|++.++||+|+||.||++++  +++.||||++...  .......+.+|+.+++++. ||||+++++++  
T Consensus        20 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~   97 (337)
T 3ll6_A           20 GQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN--EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASI   97 (337)
T ss_dssp             TCEEEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEE
T ss_pred             cceeeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC--chHHHHHHHHHHHHHHHhccCCChhhccccccc
Confidence            356788889999999999999999999998  6788999998654  3445678899999999996 99999999988  


Q ss_pred             ------cCCCCceeEEEecCCCCHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCcEEeCCCCc
Q 008656          359 ------TKPPSLCIVTEFMSGGSVYDYLHKL--KGVFKLPSLLKVAIDVSKGMNYLHQNN--IIHRDLKAANLLMDENEV  428 (558)
Q Consensus       359 ------~~~~~~~lV~E~~~ggsL~~~l~~~--~~~l~~~~~~~i~~qI~~aL~yLH~~g--IiHrDLKp~NILl~~~~~  428 (558)
                            .....+++||||+ +|+|.+++...  .+.+++..++.++.||+.||.|||++|  |+||||||+|||++.++.
T Consensus        98 ~~~~~~~~~~~~~lv~e~~-~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~  176 (337)
T 3ll6_A           98 GKEESDTGQAEFLLLTELC-KGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGT  176 (337)
T ss_dssp             CTTTSTTSSEEEEEEEECC-SEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSC
T ss_pred             cccccccCCceEEEEEEec-CCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCC
Confidence                  3444579999999 57999998653  456999999999999999999999999  999999999999999999


Q ss_pred             EEEEecCcceecccCCcc-------------ccCCCCCCccchhhh---cCCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 008656          429 VKVADFGVARVKAQSGVM-------------TAETGTYRWMAPEVI---EHKPYDHKADVFSFGIVLWELLTGKLPYEYL  492 (558)
Q Consensus       429 vkL~DFG~a~~~~~~~~~-------------~~~~gt~~y~APEv~---~~~~~s~ksDVwSlGilL~elltG~~Pf~~~  492 (558)
                      +||+|||+++........             ....||+.|+|||++   .+..++.++||||||+++|+|++|..||...
T Consensus       177 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~  256 (337)
T 3ll6_A          177 IKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDG  256 (337)
T ss_dssp             EEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---
T ss_pred             EEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcch
Confidence            999999999765443211             134589999999999   6778999999999999999999999999765


Q ss_pred             CHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHH
Q 008656          493 TPLQAAVGVVQKGLRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKEV  550 (558)
Q Consensus       493 ~~~~~~~~v~~~~~r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~  550 (558)
                      .....    .........+...++.+.+||.+||+.||.+||++.++++.|+.+....
T Consensus       257 ~~~~~----~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~  310 (337)
T 3ll6_A          257 AKLRI----VNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR  310 (337)
T ss_dssp             -------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred             hHHHh----hcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence            54332    3333444556677888999999999999999999999999999997654


No 162
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00  E-value=5.1e-43  Score=354.64  Aligned_cols=248  Identities=26%  Similarity=0.445  Sum_probs=220.0

Q ss_pred             CCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCC-ChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeE
Q 008656          291 PKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERI-NSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIV  367 (558)
Q Consensus       291 ~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~-~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV  367 (558)
                      .++|++.+.||+|+||.||++.+.  ++.||+|++..... .......+.+|+.+++.++||||+++++++...+..++|
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   93 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV   93 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence            367999999999999999999985  67899999876543 345567889999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccC-Ccc
Q 008656          368 TEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQS-GVM  446 (558)
Q Consensus       368 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~-~~~  446 (558)
                      |||++|++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++...... ...
T Consensus        94 ~e~~~~~~L~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~  172 (294)
T 2rku_A           94 LELCRRRSLLELHKR-RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK  172 (294)
T ss_dssp             EECCTTCBHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCCB
T ss_pred             EecCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccCcccc
Confidence            999999999999876 567999999999999999999999999999999999999999999999999999865433 234


Q ss_pred             ccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhh
Q 008656          447 TAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELLERCW  526 (558)
Q Consensus       447 ~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~~Ll~~cL  526 (558)
                      ....||+.|+|||++.+..++.++||||||+++|+|++|..||......+....+...  ...++..+++.+.++|.+||
T Consensus       173 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l  250 (294)
T 2rku_A          173 KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN--EYSIPKHINPVAASLIQKML  250 (294)
T ss_dssp             CCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT--CCCCCTTSCHHHHHHHHHHT
T ss_pred             ccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhc--cCCCccccCHHHHHHHHHHc
Confidence            4567899999999999999999999999999999999999999988876665554433  34577889999999999999


Q ss_pred             hcCCCCCCCHHHHHH
Q 008656          527 QQDPALRPDFSEIIE  541 (558)
Q Consensus       527 ~~dP~~RPs~~ell~  541 (558)
                      +.||.+||++.++++
T Consensus       251 ~~~p~~Rps~~~ll~  265 (294)
T 2rku_A          251 QTDPTARPTINELLN  265 (294)
T ss_dssp             CSSGGGSCCGGGGGG
T ss_pred             ccChhhCcCHHHHhh
Confidence            999999999999876


No 163
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00  E-value=2e-43  Score=353.69  Aligned_cols=250  Identities=26%  Similarity=0.503  Sum_probs=209.5

Q ss_pred             eCCCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCC-ChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCce
Q 008656          289 IDPKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERI-NSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLC  365 (558)
Q Consensus       289 i~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~-~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~  365 (558)
                      +..++|++.+.||+|+||.||+|++.  ++.||||+++.... .......+.+|+.+++.++||||+++++++..+...|
T Consensus         8 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   87 (276)
T 2h6d_A            8 VKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFF   87 (276)
T ss_dssp             CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             ceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEE
Confidence            44578999999999999999999984  78899999875421 1123467889999999999999999999999999999


Q ss_pred             eEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccCCc
Q 008656          366 IVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGV  445 (558)
Q Consensus       366 lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~  445 (558)
                      +||||+++++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++........
T Consensus        88 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~  166 (276)
T 2h6d_A           88 MVMEYVSGGELFDYICK-HGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF  166 (276)
T ss_dssp             EEEECCCSCBHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC---
T ss_pred             EEEeccCCCcHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCCcc
Confidence            99999999999999976 46789999999999999999999999999999999999999999999999999987665544


Q ss_pred             cccCCCCCCccchhhhcCCCC-CchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHH
Q 008656          446 MTAETGTYRWMAPEVIEHKPY-DHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELLER  524 (558)
Q Consensus       446 ~~~~~gt~~y~APEv~~~~~~-s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~~Ll~~  524 (558)
                      .....||+.|+|||++.+..+ +.++||||||+++|+|++|..||......+....+...  ...+|..+++.+.++|.+
T Consensus       167 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~  244 (276)
T 2h6d_A          167 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGG--VFYIPEYLNRSVATLLMH  244 (276)
T ss_dssp             ----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCCCTTSCHHHHHHHHH
T ss_pred             eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcC--cccCchhcCHHHHHHHHH
Confidence            556679999999999988776 68999999999999999999999988776655444332  345678889999999999


Q ss_pred             hhhcCCCCCCCHHHHHH
Q 008656          525 CWQQDPALRPDFSEIIE  541 (558)
Q Consensus       525 cL~~dP~~RPs~~ell~  541 (558)
                      ||+.||.+||++.++++
T Consensus       245 ~l~~~p~~Rps~~~~l~  261 (276)
T 2h6d_A          245 MLQVDPLKRATIKDIRE  261 (276)
T ss_dssp             HTCSSGGGSCCHHHHHH
T ss_pred             HccCChhhCCCHHHHHh
Confidence            99999999999999986


No 164
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00  E-value=1.6e-43  Score=384.16  Aligned_cols=247  Identities=25%  Similarity=0.361  Sum_probs=204.9

Q ss_pred             CCceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCC------
Q 008656          291 PKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPP------  362 (558)
Q Consensus       291 ~~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~------  362 (558)
                      .++|+++++||+|+||.||++.+  +++.||||++..........+.+.+|+.+|+.++||||+++++++....      
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            37899999999999999999987  4788999999876556666788999999999999999999999986554      


Q ss_pred             CceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceeccc
Q 008656          363 SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ  442 (558)
Q Consensus       363 ~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~  442 (558)
                      .+|+||||+++ +|.+.+.   ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus       141 ~~~lv~E~~~~-~l~~~~~---~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  216 (464)
T 3ttj_A          141 DVYLVMELMDA-NLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT  216 (464)
T ss_dssp             EEEEEEECCSE-EHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-----
T ss_pred             eEEEEEeCCCC-CHHHHHh---hcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCC
Confidence            45999999965 5777764   3589999999999999999999999999999999999999999999999999987776


Q ss_pred             CCccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCC--------------
Q 008656          443 SGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRP--------------  508 (558)
Q Consensus       443 ~~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~--------------  508 (558)
                      ....+...||+.|+|||++.+..|+.++|||||||++|||++|+.||.+.+..+....++.....+              
T Consensus       217 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~  296 (464)
T 3ttj_A          217 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN  296 (464)
T ss_dssp             CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHH
T ss_pred             CcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhh
Confidence            666777899999999999999999999999999999999999999999988766655544321111              


Q ss_pred             ------CC---------CCC-----------CcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          509 ------TI---------PKN-----------SQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       509 ------~i---------p~~-----------~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                            ..         +..           .++++.+||.+||..||.+|||+.|+++
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  355 (464)
T 3ttj_A          297 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ  355 (464)
T ss_dssp             HHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                  00         000           1567999999999999999999999875


No 165
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00  E-value=7.1e-43  Score=366.88  Aligned_cols=249  Identities=22%  Similarity=0.438  Sum_probs=217.1

Q ss_pred             CceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCC--Ch----HHHHHHHHHHHHHHhc-cCCCceEEEeeecCCC
Q 008656          292 KHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERI--NS----DMQKEFAQEVFIMRKV-RHKNVVQFIGACTKPP  362 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~--~~----~~~~~~~~Ev~iL~~l-~HpnIv~l~g~~~~~~  362 (558)
                      .+|++.+.||+|+||.||+|++.  |+.||||+++....  ..    ...+.+.+|+.+++++ +||||+++++++....
T Consensus        94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~  173 (365)
T 2y7j_A           94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS  173 (365)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS
T ss_pred             hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC
Confidence            57999999999999999999984  78999999976532  11    2346688999999999 7999999999999999


Q ss_pred             CceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceeccc
Q 008656          363 SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ  442 (558)
Q Consensus       363 ~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~  442 (558)
                      ..|+||||++|++|.+++.. ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++.....
T Consensus       174 ~~~lv~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~  252 (365)
T 2y7j_A          174 FMFLVFDLMRKGELFDYLTE-KVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEP  252 (365)
T ss_dssp             EEEEEECCCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred             EEEEEEEeCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCcccccCC
Confidence            99999999999999999976 46799999999999999999999999999999999999999999999999999987766


Q ss_pred             CCccccCCCCCCccchhhhc------CCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCC--CCC
Q 008656          443 SGVMTAETGTYRWMAPEVIE------HKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIP--KNS  514 (558)
Q Consensus       443 ~~~~~~~~gt~~y~APEv~~------~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip--~~~  514 (558)
                      ........||+.|+|||++.      ...++.++|||||||++|+|++|..||...+.......+.........+  ..+
T Consensus       253 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  332 (365)
T 2y7j_A          253 GEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDR  332 (365)
T ss_dssp             TCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCHHHHSSS
T ss_pred             CcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCcccccC
Confidence            55566778999999999985      3468999999999999999999999999888776665555443332222  467


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          515 QPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       515 ~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                      ++.+.+||.+||+.||.+||++.++++
T Consensus       333 ~~~~~~li~~~L~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          333 SSTVKDLISRLLQVDPEARLTAEQALQ  359 (365)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            899999999999999999999999875


No 166
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00  E-value=4.5e-43  Score=365.56  Aligned_cols=248  Identities=25%  Similarity=0.409  Sum_probs=209.4

Q ss_pred             eeCCCceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCChHHHHHHHHHHHHHHhcc-----CCCceEEEeeecC
Q 008656          288 EIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVR-----HKNVVQFIGACTK  360 (558)
Q Consensus       288 ~i~~~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~-----HpnIv~l~g~~~~  360 (558)
                      .+-.++|++.++||+|+||.||+|++  .++.||||+++..   ......+..|+.+++.+.     ||||+++++++..
T Consensus        31 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~  107 (360)
T 3llt_A           31 MLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI---KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMY  107 (360)
T ss_dssp             CEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEE
T ss_pred             eEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc---hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeE
Confidence            34467999999999999999999998  5778999999743   344567888999999997     9999999999999


Q ss_pred             CCCceeEEEecCCCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCC--------------
Q 008656          361 PPSLCIVTEFMSGGSVYDYLHKLK-GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDE--------------  425 (558)
Q Consensus       361 ~~~~~lV~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~--------------  425 (558)
                      .+..|+||||+ |++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.              
T Consensus       108 ~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~  186 (360)
T 3llt_A          108 YDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVT  186 (360)
T ss_dssp             TTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTT
T ss_pred             CCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhccc
Confidence            99999999999 999999997643 35899999999999999999999999999999999999975              


Q ss_pred             -----------CCcEEEEecCcceecccCCccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCH
Q 008656          426 -----------NEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTP  494 (558)
Q Consensus       426 -----------~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~  494 (558)
                                 ++.+||+|||+++.....  .....||+.|+|||++.+..|+.++|||||||++|+|++|+.||...+.
T Consensus       187 ~~~~~~~~~~~~~~~kl~DFG~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~  264 (360)
T 3llt_A          187 DGKKIQIYRTKSTGIKLIDFGCATFKSDY--HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEH  264 (360)
T ss_dssp             TCCEEEEEEESCCCEEECCCTTCEETTSC--CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             ccccccccccCCCCEEEEeccCceecCCC--CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcH
Confidence                       789999999999865432  3456789999999999999999999999999999999999999988776


Q ss_pred             HHHHHHHHhcCCC------------------------CCCC--------------------CCCcHHHHHHHHHhhhcCC
Q 008656          495 LQAAVGVVQKGLR------------------------PTIP--------------------KNSQPKLAELLERCWQQDP  530 (558)
Q Consensus       495 ~~~~~~v~~~~~r------------------------~~ip--------------------~~~~~~l~~Ll~~cL~~dP  530 (558)
                      .+....+......                        ...|                    ...++.+.+||.+||+.||
T Consensus       265 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP  344 (360)
T 3llt_A          265 MEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDP  344 (360)
T ss_dssp             HHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSG
T ss_pred             HHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCCh
Confidence            6554433221100                        0011                    1123778899999999999


Q ss_pred             CCCCCHHHHHH
Q 008656          531 ALRPDFSEIIE  541 (558)
Q Consensus       531 ~~RPs~~ell~  541 (558)
                      .+|||+.|+++
T Consensus       345 ~~Rpta~elL~  355 (360)
T 3llt_A          345 TLRPSPAELLK  355 (360)
T ss_dssp             GGSCCHHHHTT
T ss_pred             hhCCCHHHHhc
Confidence            99999999874


No 167
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00  E-value=1.9e-43  Score=359.61  Aligned_cols=254  Identities=30%  Similarity=0.526  Sum_probs=210.7

Q ss_pred             eeeeeeeeecCceEEEEEEECCceEEEEEecCCC--CChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeEEEec
Q 008656          294 LKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPER--INSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFM  371 (558)
Q Consensus       294 ~~i~~~LG~GsfG~Vy~g~~~~~~VAIKvlk~~~--~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~  371 (558)
                      |..+++||+|+||.||+|.+.++.||||++....  ........+.+|+.++++++||||+++++++...+..++||||+
T Consensus        33 ~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  112 (307)
T 2nru_A           33 SVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM  112 (307)
T ss_dssp             TTTCCEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             cccCCccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEec
Confidence            3445899999999999999999999999987543  23345678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccCC---cc
Q 008656          372 SGGSVYDYLHKLK--GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSG---VM  446 (558)
Q Consensus       372 ~ggsL~~~l~~~~--~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~---~~  446 (558)
                      +|++|.+++....  ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+++......   ..
T Consensus       113 ~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~  192 (307)
T 2nru_A          113 PNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMT  192 (307)
T ss_dssp             TTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEEC
T ss_pred             CCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeecccccccccccccccc
Confidence            9999999997543  458999999999999999999999999999999999999999999999999997654432   22


Q ss_pred             ccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH---Hhc----------CCCCCCCCC
Q 008656          447 TAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGV---VQK----------GLRPTIPKN  513 (558)
Q Consensus       447 ~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v---~~~----------~~r~~ip~~  513 (558)
                      ....||+.|+|||++.+ .++.++||||||+++|+|++|..||......+....+   ...          ......+..
T Consensus       193 ~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (307)
T 2nru_A          193 SRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADST  271 (307)
T ss_dssp             SSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHH
T ss_pred             cccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccchH
Confidence            34578999999999876 4899999999999999999999999765432211111   111          111223344


Q ss_pred             CcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHH
Q 008656          514 SQPKLAELLERCWQQDPALRPDFSEIIEILQQIAK  548 (558)
Q Consensus       514 ~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~  548 (558)
                      ++..+.+++.+||+.||.+||++.++++.|+++..
T Consensus       272 ~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~  306 (307)
T 2nru_A          272 SVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA  306 (307)
T ss_dssp             HHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence            56789999999999999999999999999998753


No 168
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3.8e-43  Score=361.34  Aligned_cols=252  Identities=31%  Similarity=0.595  Sum_probs=207.4

Q ss_pred             CceeeeeeeeecCceEEEEEEECCceEEEEEecCCCCChHHHHHHHHHHHHHHh--ccCCCceEEEeeecCC----CCce
Q 008656          292 KHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRK--VRHKNVVQFIGACTKP----PSLC  365 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~--l~HpnIv~l~g~~~~~----~~~~  365 (558)
                      ++|++.++||+|+||.||+|++.++.||||++....     ...+..|..++..  ++||||+++++++...    ..+|
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~  111 (337)
T 3mdy_A           37 KQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTE-----EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLY  111 (337)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEETTEEEEEEEEEGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEE
T ss_pred             cceEEEeEeecCCCeEEEEEEECCceEEEEEEeccc-----cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceE
Confidence            589999999999999999999999999999986431     2344555555554  4899999999998766    6789


Q ss_pred             eEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC--------CceeccCCCCcEEeCCCCcEEEEecCcc
Q 008656          366 IVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQN--------NIIHRDLKAANLLMDENEVVKVADFGVA  437 (558)
Q Consensus       366 lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~--------gIiHrDLKp~NILl~~~~~vkL~DFG~a  437 (558)
                      +||||++||+|.+++..  ..+++..++.++.||+.||.|||++        ||+||||||+|||++.++.+||+|||++
T Consensus       112 lv~e~~~~g~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a  189 (337)
T 3mdy_A          112 LITDYHENGSLYDYLKS--TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA  189 (337)
T ss_dssp             EEECCCTTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EEEeccCCCcHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCc
Confidence            99999999999999965  4699999999999999999999999        9999999999999999999999999999


Q ss_pred             eecccCCc-----cccCCCCCCccchhhhcCCCCCch------HHHHHHHHHHHHHHcC----------CCCCCCCCH--
Q 008656          438 RVKAQSGV-----MTAETGTYRWMAPEVIEHKPYDHK------ADVFSFGIVLWELLTG----------KLPYEYLTP--  494 (558)
Q Consensus       438 ~~~~~~~~-----~~~~~gt~~y~APEv~~~~~~s~k------sDVwSlGilL~elltG----------~~Pf~~~~~--  494 (558)
                      +.......     .....||+.|+|||++.+..++.+      +|||||||++|||++|          ..||....+  
T Consensus       190 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~  269 (337)
T 3mdy_A          190 VKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSD  269 (337)
T ss_dssp             EECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred             eeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCC
Confidence            76543321     124579999999999988776664      9999999999999999          777765422  


Q ss_pred             ---HHHHHHHHhcCCCCCCCC-----CCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHH
Q 008656          495 ---LQAAVGVVQKGLRPTIPK-----NSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKEV  550 (558)
Q Consensus       495 ---~~~~~~v~~~~~r~~ip~-----~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~  550 (558)
                         ......+.....++.++.     .+++.+.+||.+||+.||.+||++.++++.|+++.++.
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~  333 (337)
T 3mdy_A          270 PSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ  333 (337)
T ss_dssp             CCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred             CchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence               222222333445555554     56788999999999999999999999999999998754


No 169
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00  E-value=3.8e-43  Score=362.41  Aligned_cols=253  Identities=29%  Similarity=0.585  Sum_probs=215.1

Q ss_pred             CCceeeeeeeeecCceEEEEEEECCceEEEEEecCCCCChHHHHHHHHHHHHHHh--ccCCCceEEEeeecCCC----Cc
Q 008656          291 PKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRK--VRHKNVVQFIGACTKPP----SL  364 (558)
Q Consensus       291 ~~~~~i~~~LG~GsfG~Vy~g~~~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~--l~HpnIv~l~g~~~~~~----~~  364 (558)
                      .++|++.+.||+|+||.||+|++.++.||||+++..     ....+.+|+.+++.  ++||||+++++++....    .+
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~  115 (342)
T 1b6c_B           41 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL  115 (342)
T ss_dssp             HHHCEEEEEEEEETTEEEEEEEETTEEEEEEEECGG-----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCE
T ss_pred             cccEEEEeeecCCCCcEEEEEEEcCccEEEEEeCch-----hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcccee
Confidence            368999999999999999999999999999998743     24567889999888  78999999999987765    78


Q ss_pred             eeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH--------HCCceeccCCCCcEEeCCCCcEEEEecCc
Q 008656          365 CIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH--------QNNIIHRDLKAANLLMDENEVVKVADFGV  436 (558)
Q Consensus       365 ~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH--------~~gIiHrDLKp~NILl~~~~~vkL~DFG~  436 (558)
                      |+||||+++|+|.+++.+  ..+++..++.++.||+.||.|||        ++||+||||||+|||++.++.+||+|||+
T Consensus       116 ~lv~e~~~~g~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~  193 (342)
T 1b6c_B          116 WLVSDYHEHGSLFDYLNR--YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL  193 (342)
T ss_dssp             EEEECCCTTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred             EEEEeecCCCcHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCC
Confidence            999999999999999975  56899999999999999999999        89999999999999999999999999999


Q ss_pred             ceecccCC-----ccccCCCCCCccchhhhcCC------CCCchHHHHHHHHHHHHHHcC----------CCCCCCCC--
Q 008656          437 ARVKAQSG-----VMTAETGTYRWMAPEVIEHK------PYDHKADVFSFGIVLWELLTG----------KLPYEYLT--  493 (558)
Q Consensus       437 a~~~~~~~-----~~~~~~gt~~y~APEv~~~~------~~s~ksDVwSlGilL~elltG----------~~Pf~~~~--  493 (558)
                      ++......     ......||+.|+|||++.+.      .++.++||||||+++|+|++|          ..||....  
T Consensus       194 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~  273 (342)
T 1b6c_B          194 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS  273 (342)
T ss_dssp             CEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred             ceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcC
Confidence            97665443     23455799999999999876      334789999999999999999          78997653  


Q ss_pred             ---HHHHHHHHHhcCCCCCCCC-----CCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHH
Q 008656          494 ---PLQAAVGVVQKGLRPTIPK-----NSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKEV  550 (558)
Q Consensus       494 ---~~~~~~~v~~~~~r~~ip~-----~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~  550 (558)
                         .......+.....++.++.     .++..+.+||.+||+.||.+||++.++++.|+++.++.
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~  338 (342)
T 1b6c_B          274 DPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE  338 (342)
T ss_dssp             SCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred             cccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence               2333333445555666654     34578999999999999999999999999999998754


No 170
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00  E-value=7.8e-44  Score=371.12  Aligned_cols=256  Identities=18%  Similarity=0.256  Sum_probs=211.7

Q ss_pred             eeCCCceeeeeeeeecCceEEEEEEEC----------CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceE----
Q 008656          288 EIDPKHLKFGSKVASGSYGDLYRGTYC----------SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ----  353 (558)
Q Consensus       288 ~i~~~~~~i~~~LG~GsfG~Vy~g~~~----------~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~----  353 (558)
                      ....++|++.+.||+|+||.||+|++.          ++.||||+++..       ..+.+|+.++++++||||++    
T Consensus        38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~  110 (352)
T 2jii_A           38 DKSGRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------GRLFNEQNFFQRAAKPLQVNKWKK  110 (352)
T ss_dssp             CTTSCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------STHHHHHHHHHHHCCHHHHHHHHH
T ss_pred             cccCCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------chHHHHHHHHHHhcccchhhhhhh
Confidence            344689999999999999999999874          578999998854       35788999999999999988    


Q ss_pred             -----------EEeeecC-CCCceeEEEecCCCCHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCc
Q 008656          354 -----------FIGACTK-PPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAAN  420 (558)
Q Consensus       354 -----------l~g~~~~-~~~~~lV~E~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~N  420 (558)
                                 +++++.. ....|+||||+ |++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|
T Consensus       111 ~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~N  189 (352)
T 2jii_A          111 LYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAEN  189 (352)
T ss_dssp             HTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGG
T ss_pred             hccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHH
Confidence                       4555543 67789999999 99999999864 3679999999999999999999999999999999999


Q ss_pred             EEeCCCC--cEEEEecCcceecccCC--------ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCC
Q 008656          421 LLMDENE--VVKVADFGVARVKAQSG--------VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYE  490 (558)
Q Consensus       421 ILl~~~~--~vkL~DFG~a~~~~~~~--------~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~  490 (558)
                      ||++.++  .+||+|||+++......        ......||+.|+|||++.+..++.++||||||+++|+|++|+.||.
T Consensus       190 Il~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~  269 (352)
T 2jii_A          190 IFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWT  269 (352)
T ss_dssp             EEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTG
T ss_pred             EEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence            9999988  89999999997654322        2234479999999999999999999999999999999999999998


Q ss_pred             CCC-HHHHHHHHHh--cCCCCCCC------CCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHH
Q 008656          491 YLT-PLQAAVGVVQ--KGLRPTIP------KNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKEVY  551 (558)
Q Consensus       491 ~~~-~~~~~~~v~~--~~~r~~ip------~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~~  551 (558)
                      ... ..........  ......++      ..+++.+.+||.+||..||.+||++.++++.|+++.++..
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~  339 (352)
T 2jii_A          270 NCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR  339 (352)
T ss_dssp             GGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             cCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence            764 2222222111  11111121      2468999999999999999999999999999999988764


No 171
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00  E-value=6e-44  Score=358.21  Aligned_cols=248  Identities=25%  Similarity=0.427  Sum_probs=192.1

Q ss_pred             CceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeEE
Q 008656          292 KHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERIN-SDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVT  368 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~-~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV~  368 (558)
                      ++|++.+.||+|+||.||+|+.  .++.||||++...... ......+.+|+.++++++||||+++++++...+..|+||
T Consensus        11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   90 (278)
T 3cok_A           11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL   90 (278)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence            5799999999999999999997  5788999998753211 123467899999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccC-Cccc
Q 008656          369 EFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQS-GVMT  447 (558)
Q Consensus       369 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~-~~~~  447 (558)
                      ||+++++|.+++......+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++...... ....
T Consensus        91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~  170 (278)
T 3cok_A           91 EMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHY  170 (278)
T ss_dssp             ECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC-------
T ss_pred             ecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCcce
Confidence            999999999999876678999999999999999999999999999999999999999999999999999865432 2233


Q ss_pred             cCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhhh
Q 008656          448 AETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELLERCWQ  527 (558)
Q Consensus       448 ~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~~Ll~~cL~  527 (558)
                      ...||+.|+|||++.+..++.++||||||+++|+|++|..||...+..+....+...  ....|..+++++.+||.+||+
T Consensus       171 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~  248 (278)
T 3cok_A          171 TLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA--DYEMPSFLSIEAKDLIHQLLR  248 (278)
T ss_dssp             ---------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSS--CCCCCTTSCHHHHHHHHHHSC
T ss_pred             eccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhc--ccCCccccCHHHHHHHHHHcc
Confidence            457899999999999999999999999999999999999999876544433332222  234677889999999999999


Q ss_pred             cCCCCCCCHHHHHH
Q 008656          528 QDPALRPDFSEIIE  541 (558)
Q Consensus       528 ~dP~~RPs~~ell~  541 (558)
                      .||.+||++.++++
T Consensus       249 ~dp~~Rps~~~~l~  262 (278)
T 3cok_A          249 RNPADRLSLSSVLD  262 (278)
T ss_dssp             SSGGGSCCHHHHTT
T ss_pred             cCHhhCCCHHHHhc
Confidence            99999999999875


No 172
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00  E-value=1.3e-42  Score=351.65  Aligned_cols=250  Identities=24%  Similarity=0.386  Sum_probs=218.7

Q ss_pred             CCceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCC---C----hHHHHHHHHHHHHHHhcc-CCCceEEEeeecC
Q 008656          291 PKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERI---N----SDMQKEFAQEVFIMRKVR-HKNVVQFIGACTK  360 (558)
Q Consensus       291 ~~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~---~----~~~~~~~~~Ev~iL~~l~-HpnIv~l~g~~~~  360 (558)
                      .++|++.+.||+|+||.||++++  +++.||||+++....   .    ......+.+|+.+++++. ||||+++++++..
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   95 (298)
T 1phk_A           16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   95 (298)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence            46899999999999999999998  468899999976532   1    123467889999999996 9999999999999


Q ss_pred             CCCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceec
Q 008656          361 PPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVK  440 (558)
Q Consensus       361 ~~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~  440 (558)
                      ....++||||+++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++...
T Consensus        96 ~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  174 (298)
T 1phk_A           96 NTFFFLVFDLMKKGELFDYLTE-KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL  174 (298)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             CCeEEEEEeccCCCcHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchhhc
Confidence            9999999999999999999976 567999999999999999999999999999999999999999999999999999877


Q ss_pred             ccCCccccCCCCCCccchhhhc------CCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCC--C
Q 008656          441 AQSGVMTAETGTYRWMAPEVIE------HKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIP--K  512 (558)
Q Consensus       441 ~~~~~~~~~~gt~~y~APEv~~------~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip--~  512 (558)
                      ..........||+.|+|||++.      ...++.++||||||+++|+|++|..||...+.......+.........+  .
T Consensus       175 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (298)
T 1phk_A          175 DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWD  254 (298)
T ss_dssp             CTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGG
T ss_pred             CCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCccccc
Confidence            6655556678999999999985      5678999999999999999999999999888777666655544433322  4


Q ss_pred             CCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          513 NSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       513 ~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                      .+++.+.+||.+||..||.+||++.++++
T Consensus       255 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          255 DYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             GSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             ccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence            67899999999999999999999999874


No 173
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00  E-value=2.9e-43  Score=360.29  Aligned_cols=258  Identities=18%  Similarity=0.315  Sum_probs=210.8

Q ss_pred             CCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCC-ChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeE
Q 008656          291 PKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERI-NSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIV  367 (558)
Q Consensus       291 ~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~-~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV  367 (558)
                      .++|++.+.||+|+||.||++++.  ++.||||+++.... .......+.+|+.++++++||||+++++++...+.+|+|
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv  112 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD  112 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence            468999999999999999999974  77899999986543 334557899999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccCC--c
Q 008656          368 TEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSG--V  445 (558)
Q Consensus       368 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~--~  445 (558)
                      |||++|++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......  .
T Consensus       113 ~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~  191 (309)
T 2h34_A          113 MRLINGVDLAAMLRR-QGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQ  191 (309)
T ss_dssp             EECCCCEEHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC-----------
T ss_pred             EEecCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCcccccccccc
Confidence            999999999999976 4679999999999999999999999999999999999999999999999999987654432  2


Q ss_pred             cccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCC--CCCCCCCcHHHHHHHH
Q 008656          446 MTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLR--PTIPKNSQPKLAELLE  523 (558)
Q Consensus       446 ~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r--~~ip~~~~~~l~~Ll~  523 (558)
                      .....||+.|+|||++.+..++.++||||||+++|+|++|..||...+..... ..+.....  ...+..+++.+.++|.
T Consensus       192 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~  270 (309)
T 2h34_A          192 LGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMG-AHINQAIPRPSTVRPGIPVAFDAVIA  270 (309)
T ss_dssp             -----CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHH-HHHHSCCCCGGGTSTTCCTHHHHHHH
T ss_pred             ccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHH-HHhccCCCCccccCCCCCHHHHHHHH
Confidence            33557899999999999999999999999999999999999999887655332 32332222  2356678999999999


Q ss_pred             HhhhcCCCCCC-CHHHHHHHHHHHHHHH
Q 008656          524 RCWQQDPALRP-DFSEIIEILQQIAKEV  550 (558)
Q Consensus       524 ~cL~~dP~~RP-s~~ell~~L~~l~~~~  550 (558)
                      +||..||.+|| ++.++++.|++++...
T Consensus       271 ~~l~~dP~~Rp~s~~~l~~~l~~~l~~~  298 (309)
T 2h34_A          271 RGMAKNPEDRYVTCGDLSAAAHAALATA  298 (309)
T ss_dssp             HHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred             HhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence            99999999999 9999999999876544


No 174
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00  E-value=3.7e-43  Score=353.92  Aligned_cols=250  Identities=23%  Similarity=0.430  Sum_probs=218.8

Q ss_pred             eeCCCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCC-hHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCc
Q 008656          288 EIDPKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERIN-SDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSL  364 (558)
Q Consensus       288 ~i~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~-~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~  364 (558)
                      .+..++|++.+.||+|+||.||++++.  ++.||||++...... ......+.+|+.+++.++||||+++++++......
T Consensus        10 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   89 (284)
T 2vgo_A           10 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRI   89 (284)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred             chhhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEE
Confidence            344578999999999999999999985  567999998653221 12246788999999999999999999999999999


Q ss_pred             eeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccCC
Q 008656          365 CIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSG  444 (558)
Q Consensus       365 ~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~  444 (558)
                      |+||||+++++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++...... 
T Consensus        90 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~-  167 (284)
T 2vgo_A           90 YLMLEFAPRGELYKELQK-HGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL-  167 (284)
T ss_dssp             EEEECCCTTEEHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS-
T ss_pred             EEEEEeCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCccc-
Confidence            999999999999999976 467999999999999999999999999999999999999999999999999998755432 


Q ss_pred             ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHH
Q 008656          445 VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELLER  524 (558)
Q Consensus       445 ~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~~Ll~~  524 (558)
                      ......|++.|+|||++.+..++.++||||||+++|+|++|..||...+.......+...  ...+|..+++.+.++|.+
T Consensus       168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~  245 (284)
T 2vgo_A          168 RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV--DLKFPPFLSDGSKDLISK  245 (284)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT--CCCCCTTSCHHHHHHHHH
T ss_pred             ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhcc--ccCCCCcCCHHHHHHHHH
Confidence            234567899999999999999999999999999999999999999988877666555433  345778899999999999


Q ss_pred             hhhcCCCCCCCHHHHHH
Q 008656          525 CWQQDPALRPDFSEIIE  541 (558)
Q Consensus       525 cL~~dP~~RPs~~ell~  541 (558)
                      ||..||.+||++.++++
T Consensus       246 ~l~~~p~~Rps~~~ll~  262 (284)
T 2vgo_A          246 LLRYHPPQRLPLKGVME  262 (284)
T ss_dssp             HSCSSGGGSCCHHHHHT
T ss_pred             HhhcCHhhCCCHHHHhh
Confidence            99999999999999985


No 175
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00  E-value=1e-43  Score=368.93  Aligned_cols=242  Identities=22%  Similarity=0.398  Sum_probs=211.8

Q ss_pred             CceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCChH------HHHHHHHHHHHHHhccCCCceEEEeeecCCCC
Q 008656          292 KHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSD------MQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS  363 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~~------~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~  363 (558)
                      ++|++.+.||+|+||.||+|.+  +++.||||+++.......      ....+.+|+.++++++||||+++++++...+.
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~  103 (335)
T 3dls_A           24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGF  103 (335)
T ss_dssp             HHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             cceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCE
Confidence            5799999999999999999987  578899999987643221      33467789999999999999999999999999


Q ss_pred             ceeEEEecCCC-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceeccc
Q 008656          364 LCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ  442 (558)
Q Consensus       364 ~~lV~E~~~gg-sL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~  442 (558)
                      +++||||+.+| +|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus       104 ~~lv~e~~~~g~~l~~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~  182 (335)
T 3dls_A          104 FQLVMEKHGSGLDLFAFIDR-HPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLER  182 (335)
T ss_dssp             EEEEEECCTTSCBHHHHHHT-CCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             EEEEEEeCCCCccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceECCC
Confidence            99999999766 99999976 55799999999999999999999999999999999999999999999999999987766


Q ss_pred             CCccccCCCCCCccchhhhcCCCC-CchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHH
Q 008656          443 SGVMTAETGTYRWMAPEVIEHKPY-DHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAEL  521 (558)
Q Consensus       443 ~~~~~~~~gt~~y~APEv~~~~~~-s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~~L  521 (558)
                      ........||+.|+|||++.+..+ +.++|||||||++|+|++|..||.....      ..  ......+..+++++.+|
T Consensus       183 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~--~~~~~~~~~~~~~l~~l  254 (335)
T 3dls_A          183 GKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE------TV--EAAIHPPYLVSKELMSL  254 (335)
T ss_dssp             TCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG------GT--TTCCCCSSCCCHHHHHH
T ss_pred             CCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH------HH--hhccCCCcccCHHHHHH
Confidence            666666789999999999998887 8899999999999999999999976432      11  12334566789999999


Q ss_pred             HHHhhhcCCCCCCCHHHHHHH
Q 008656          522 LERCWQQDPALRPDFSEIIEI  542 (558)
Q Consensus       522 l~~cL~~dP~~RPs~~ell~~  542 (558)
                      |.+||+.||.+||++.++++.
T Consensus       255 i~~~L~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          255 VSGLLQPVPERRTTLEKLVTD  275 (335)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHC
T ss_pred             HHHHccCChhhCcCHHHHhcC
Confidence            999999999999999999863


No 176
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00  E-value=7.3e-43  Score=394.29  Aligned_cols=264  Identities=31%  Similarity=0.600  Sum_probs=228.8

Q ss_pred             CceeeCCCceeeeeeeeecCceEEEEEEECC-----ceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeec
Q 008656          285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCS-----QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACT  359 (558)
Q Consensus       285 ~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~~-----~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~  359 (558)
                      ..|++..++|++.+.||+|+||.||+|.+..     ..||||+++.. ........+.+|+.++++++||||+++++++.
T Consensus       383 ~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~  461 (656)
T 2j0j_A          383 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT  461 (656)
T ss_dssp             GGTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST-TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe
Confidence            4678888999999999999999999999843     45999988754 24455678999999999999999999999985


Q ss_pred             CCCCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCccee
Q 008656          360 KPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV  439 (558)
Q Consensus       360 ~~~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~  439 (558)
                      . +..|+||||++||+|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus       462 ~-~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~  540 (656)
T 2j0j_A          462 E-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY  540 (656)
T ss_dssp             S-SSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCS
T ss_pred             c-CceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCee
Confidence            4 568999999999999999987666799999999999999999999999999999999999999999999999999986


Q ss_pred             cccCCc--cccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcH
Q 008656          440 KAQSGV--MTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQP  516 (558)
Q Consensus       440 ~~~~~~--~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~  516 (558)
                      ......  .....+|+.|+|||++.+..++.++||||||+++|||++ |..||.+.+..+....+ ..+.++.++..+++
T Consensus       541 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i-~~~~~~~~~~~~~~  619 (656)
T 2j0j_A          541 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI-ENGERLPMPPNCPP  619 (656)
T ss_dssp             CCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH-HHTCCCCCCTTCCH
T ss_pred             cCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH-HcCCCCCCCccccH
Confidence            544322  223456789999999999999999999999999999997 99999998877665544 44566778889999


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHH
Q 008656          517 KLAELLERCWQQDPALRPDFSEIIEILQQIAKEVY  551 (558)
Q Consensus       517 ~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~~  551 (558)
                      .+.+||.+||..||.+||++.++++.|++++++.+
T Consensus       620 ~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~k  654 (656)
T 2j0j_A          620 TLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK  654 (656)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999987654


No 177
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00  E-value=4.3e-43  Score=373.43  Aligned_cols=243  Identities=23%  Similarity=0.375  Sum_probs=195.2

Q ss_pred             Cceeee-eeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHH-HhccCCCceEEEeeecC----CCC
Q 008656          292 KHLKFG-SKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIM-RKVRHKNVVQFIGACTK----PPS  363 (558)
Q Consensus       292 ~~~~i~-~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL-~~l~HpnIv~l~g~~~~----~~~  363 (558)
                      ++|.+. +.||+|+||.||++.+.  ++.||||+++..       ..+.+|+.++ +..+||||+++++++..    ...
T Consensus        61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~  133 (400)
T 1nxk_A           61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKC  133 (400)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred             ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcE
Confidence            456666 78999999999999984  678999999743       3567788887 45589999999998754    567


Q ss_pred             ceeEEEecCCCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCC---CCcEEEEecCccee
Q 008656          364 LCIVTEFMSGGSVYDYLHKLK-GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDE---NEVVKVADFGVARV  439 (558)
Q Consensus       364 ~~lV~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~---~~~vkL~DFG~a~~  439 (558)
                      +||||||++||+|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.   ++.+||+|||+++.
T Consensus       134 ~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~  213 (400)
T 1nxk_A          134 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE  213 (400)
T ss_dssp             EEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred             EEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccc
Confidence            899999999999999997643 35999999999999999999999999999999999999997   78999999999987


Q ss_pred             cccCCccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHH----HHHHHHhcCCCC--CCCCC
Q 008656          440 KAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQ----AAVGVVQKGLRP--TIPKN  513 (558)
Q Consensus       440 ~~~~~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~----~~~~v~~~~~r~--~ip~~  513 (558)
                      ...........||+.|+|||++.+..|+.++|||||||++|+|++|..||.......    ....+.......  .....
T Consensus       214 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  293 (400)
T 1nxk_A          214 TTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE  293 (400)
T ss_dssp             CC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTT
T ss_pred             cCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCccccc
Confidence            666555667789999999999999999999999999999999999999997654321    112222222221  12256


Q ss_pred             CcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          514 SQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       514 ~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                      +++++.+||.+||..||.+|||+.++++
T Consensus       294 ~s~~~~~li~~~L~~dP~~Rpt~~eil~  321 (400)
T 1nxk_A          294 VSEEVKMLIRNLLKTEPTQRMTITEFMN  321 (400)
T ss_dssp             SCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            8999999999999999999999999986


No 178
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00  E-value=4.3e-43  Score=366.03  Aligned_cols=251  Identities=25%  Similarity=0.429  Sum_probs=213.1

Q ss_pred             eeCCCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCce
Q 008656          288 EIDPKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLC  365 (558)
Q Consensus       288 ~i~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~  365 (558)
                      ++..++|++.++||+|+||.||++++.  ++.||+|+++... .......+.+|+.++++++||||+++++++..++..|
T Consensus        29 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  107 (360)
T 3eqc_A           29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS  107 (360)
T ss_dssp             CCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC-CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEE
T ss_pred             ccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc-CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEE
Confidence            455678999999999999999999986  7889999998653 4555678999999999999999999999999999999


Q ss_pred             eEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCcEEeCCCCcEEEEecCcceecccCC
Q 008656          366 IVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQN-NIIHRDLKAANLLMDENEVVKVADFGVARVKAQSG  444 (558)
Q Consensus       366 lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~-gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~  444 (558)
                      +||||++|++|.+++.. .+.+++..++.++.||+.||.|||++ ||+||||||+|||++.++.+||+|||++...... 
T Consensus       108 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-  185 (360)
T 3eqc_A          108 ICMEHMDGGSLDQVLKK-AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-  185 (360)
T ss_dssp             EEECCCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH-
T ss_pred             EEEECCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc-
Confidence            99999999999999976 46799999999999999999999996 9999999999999999999999999998654322 


Q ss_pred             ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHH------------------------
Q 008656          445 VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVG------------------------  500 (558)
Q Consensus       445 ~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~------------------------  500 (558)
                      ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+..+....                        
T Consensus       186 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (360)
T 3eqc_A          186 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLN  265 (360)
T ss_dssp             C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC----------------------
T ss_pred             cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCccc
Confidence            23445799999999999999999999999999999999999999987665432211                        


Q ss_pred             -----------------HHhcCCCCC-CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          501 -----------------VVQKGLRPT-IPKNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       501 -----------------v~~~~~r~~-ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                                       .......+. .+..+++++.+||.+||+.||.+|||+.++++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  324 (360)
T 3eqc_A          266 KFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV  324 (360)
T ss_dssp             --------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             ccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence                             111112222 23457899999999999999999999999985


No 179
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00  E-value=8.4e-43  Score=354.58  Aligned_cols=247  Identities=34%  Similarity=0.586  Sum_probs=219.8

Q ss_pred             CceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeEEE
Q 008656          292 KHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTE  369 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV~E  369 (558)
                      +.|++.++||+|+||.||+|++.  ++.||||+++..... .....+.+|+.+++.++||||+++++++.....+|+|||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  100 (303)
T 3a7i_A           22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME  100 (303)
T ss_dssp             GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCS-TTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccH-HHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence            56999999999999999999874  778999999865432 345789999999999999999999999999899999999


Q ss_pred             ecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccCC-cccc
Q 008656          370 FMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSG-VMTA  448 (558)
Q Consensus       370 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~-~~~~  448 (558)
                      |++|++|.+++..  +.+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++....... ....
T Consensus       101 ~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  178 (303)
T 3a7i_A          101 YLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT  178 (303)
T ss_dssp             CCTTEEHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCC
T ss_pred             eCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCccccccCc
Confidence            9999999999964  679999999999999999999999999999999999999999999999999997655432 3345


Q ss_pred             CCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhhhc
Q 008656          449 ETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELLERCWQQ  528 (558)
Q Consensus       449 ~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~~Ll~~cL~~  528 (558)
                      ..||+.|+|||++.+..++.++||||||+++|+|++|..||....+......+ .....+.++..+++.+.+||.+||..
T Consensus       179 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~  257 (303)
T 3a7i_A          179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI-PKNNPPTLEGNYSKPLKEFVEACLNK  257 (303)
T ss_dssp             CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH-HHSCCCCCCSSCCHHHHHHHHHHCCS
T ss_pred             cCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHh-hcCCCCCCccccCHHHHHHHHHHcCC
Confidence            67899999999999999999999999999999999999999988877655443 34556677889999999999999999


Q ss_pred             CCCCCCCHHHHHHH
Q 008656          529 DPALRPDFSEIIEI  542 (558)
Q Consensus       529 dP~~RPs~~ell~~  542 (558)
                      ||.+||++.++++.
T Consensus       258 dp~~Rps~~~ll~~  271 (303)
T 3a7i_A          258 EPSFRPTAKELLKH  271 (303)
T ss_dssp             SGGGSCCHHHHTTC
T ss_pred             ChhhCcCHHHHhhC
Confidence            99999999999863


No 180
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00  E-value=1.2e-43  Score=362.70  Aligned_cols=263  Identities=21%  Similarity=0.350  Sum_probs=215.9

Q ss_pred             CCceeeCCCceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeec--
Q 008656          284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACT--  359 (558)
Q Consensus       284 ~~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~--  359 (558)
                      +..+.++.++|++.+.||+|+||.||++..  .++.||||++...  .......+.+|+.++++++||||+++++++.  
T Consensus        21 g~~~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   98 (317)
T 2buj_A           21 GHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH--EQQDREEAQREADMHRLFNHPNILRLVAYCLRE   98 (317)
T ss_dssp             EEEEEETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEE
T ss_pred             ccEEEECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC--CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEec
Confidence            356788899999999999999999999996  5788999998653  3455678999999999999999999999986  


Q ss_pred             --CCCCceeEEEecCCCCHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEec
Q 008656          360 --KPPSLCIVTEFMSGGSVYDYLHKL---KGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADF  434 (558)
Q Consensus       360 --~~~~~~lV~E~~~ggsL~~~l~~~---~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DF  434 (558)
                        .....|+||||+.+++|.+++...   ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+||
T Consensus        99 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~df  178 (317)
T 2buj_A           99 RGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDL  178 (317)
T ss_dssp             ETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCC
T ss_pred             cCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEec
Confidence              345789999999999999999763   466999999999999999999999999999999999999999999999999


Q ss_pred             CcceecccCC----------ccccCCCCCCccchhhhcCCC---CCchHHHHHHHHHHHHHHcCCCCCCCCCHH-HHHHH
Q 008656          435 GVARVKAQSG----------VMTAETGTYRWMAPEVIEHKP---YDHKADVFSFGIVLWELLTGKLPYEYLTPL-QAAVG  500 (558)
Q Consensus       435 G~a~~~~~~~----------~~~~~~gt~~y~APEv~~~~~---~s~ksDVwSlGilL~elltG~~Pf~~~~~~-~~~~~  500 (558)
                      |+++......          ......||+.|+|||++.+..   ++.++||||||+++|+|++|..||...... .....
T Consensus       179 g~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~  258 (317)
T 2buj_A          179 GSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVAL  258 (317)
T ss_dssp             SSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHH
T ss_pred             CcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhH
Confidence            9987543211          112345799999999997654   789999999999999999999999532110 01112


Q ss_pred             HHhcCCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHH
Q 008656          501 VVQKGLRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAK  548 (558)
Q Consensus       501 v~~~~~r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~  548 (558)
                      ..........+..+++.+.++|.+||+.||.+||++.++++.|+.+..
T Consensus       259 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  306 (317)
T 2buj_A          259 AVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP  306 (317)
T ss_dssp             HHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred             HhhccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence            223344445566789999999999999999999999999999987643


No 181
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00  E-value=2.7e-43  Score=353.29  Aligned_cols=247  Identities=26%  Similarity=0.418  Sum_probs=212.7

Q ss_pred             CceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecC---------
Q 008656          292 KHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTK---------  360 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~---------  360 (558)
                      .+|++.+.||+|+||.||++.+.  ++.||+|+++...      ..+.+|+.++++++||||+++++++..         
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   84 (284)
T 2a19_B           11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS   84 (284)
T ss_dssp             HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred             cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence            57999999999999999999985  7889999998642      356789999999999999999998743         


Q ss_pred             -------CCCceeEEEecCCCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEE
Q 008656          361 -------PPSLCIVTEFMSGGSVYDYLHKLK-GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVA  432 (558)
Q Consensus       361 -------~~~~~lV~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~  432 (558)
                             ...+++||||+++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+
T Consensus        85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~  164 (284)
T 2a19_B           85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIG  164 (284)
T ss_dssp             ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEEC
T ss_pred             ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEEC
Confidence                   345799999999999999997643 568999999999999999999999999999999999999999999999


Q ss_pred             ecCcceecccCCccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCC
Q 008656          433 DFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPK  512 (558)
Q Consensus       433 DFG~a~~~~~~~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~  512 (558)
                      |||++.............||+.|+|||++.+..++.++||||||+++|+|++|..||....   .......   ...++.
T Consensus       165 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~---~~~~~~~---~~~~~~  238 (284)
T 2a19_B          165 DFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS---KFFTDLR---DGIISD  238 (284)
T ss_dssp             CCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH---HHHHHHH---TTCCCT
T ss_pred             cchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH---HHHHHhh---cccccc
Confidence            9999987766555566689999999999999999999999999999999999998874321   1111122   234567


Q ss_pred             CCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHH
Q 008656          513 NSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKEV  550 (558)
Q Consensus       513 ~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~  550 (558)
                      .+++.+.++|.+||..||.+||++.++++.|..+.+..
T Consensus       239 ~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~  276 (284)
T 2a19_B          239 IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSP  276 (284)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC--
T ss_pred             cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCC
Confidence            78999999999999999999999999999999886554


No 182
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00  E-value=1e-42  Score=357.26  Aligned_cols=250  Identities=31%  Similarity=0.520  Sum_probs=209.7

Q ss_pred             eCCCceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCChHHHHHHHHHHHHHHhc-cCCCceEEEeeecC-----
Q 008656          289 IDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKV-RHKNVVQFIGACTK-----  360 (558)
Q Consensus       289 i~~~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l-~HpnIv~l~g~~~~-----  360 (558)
                      ...++|++.+.||+|+||.||+|++  .++.||||++......   ...+.+|+.+++++ +||||+++++++..     
T Consensus        21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~   97 (326)
T 2x7f_A           21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE---EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG   97 (326)
T ss_dssp             CCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSST---THHHHHHHHHHHHHCCSTTBCCEEEEEEECC--C
T ss_pred             CCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCccc---HHHHHHHHHHHHhccCCCCeeeeeeEEeeccCcc
Confidence            3457899999999999999999998  5788999999765322   35788999999999 79999999999865     


Q ss_pred             -CCCceeEEEecCCCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcce
Q 008656          361 -PPSLCIVTEFMSGGSVYDYLHKLK-GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR  438 (558)
Q Consensus       361 -~~~~~lV~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~  438 (558)
                       ...+|+||||+++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus        98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~  177 (326)
T 2x7f_A           98 MDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSA  177 (326)
T ss_dssp             CCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC
T ss_pred             ccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCce
Confidence             457899999999999999997643 568999999999999999999999999999999999999999999999999987


Q ss_pred             ecccC-CccccCCCCCCccchhhhc-----CCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCC
Q 008656          439 VKAQS-GVMTAETGTYRWMAPEVIE-----HKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPK  512 (558)
Q Consensus       439 ~~~~~-~~~~~~~gt~~y~APEv~~-----~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~  512 (558)
                      ..... .......||+.|+|||++.     +..++.++|||||||++|+|++|..||...........+.........+.
T Consensus       178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  257 (326)
T 2x7f_A          178 QLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSK  257 (326)
T ss_dssp             -------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCS
T ss_pred             ecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCccccCCcc
Confidence            65432 2334557999999999997     56799999999999999999999999999888777666555544444567


Q ss_pred             CCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          513 NSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       513 ~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                      .+++.+.+||.+||..||.+||++.++++
T Consensus       258 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          258 KWSKKFQSFIESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             CSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             ccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            78999999999999999999999999986


No 183
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00  E-value=1.5e-44  Score=371.34  Aligned_cols=260  Identities=30%  Similarity=0.524  Sum_probs=212.3

Q ss_pred             CceeeCCCceeeeeeeeecCceEEEEEEE-CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCC
Q 008656          285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS  363 (558)
Q Consensus       285 ~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~-~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~  363 (558)
                      ..+.+..++|++.+.||+|+||.||+|++ .++.||||+++...... ....+.+|+.+++.++||||+++++++..+..
T Consensus        23 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~  101 (326)
T 3uim_A           23 RELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQG-GELQFQTEVEMISMAVHRNLLRLRGFCMTPTE  101 (326)
T ss_dssp             HHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSC
T ss_pred             HHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCch-HHHHHHHHHHHHHhccCCCccceEEEEecCCc
Confidence            34566778999999999999999999987 47889999998654222 22368899999999999999999999999999


Q ss_pred             ceeEEEecCCCCHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCCCcEEeCCCCcEEEEecCcc
Q 008656          364 LCIVTEFMSGGSVYDYLHKLK---GVFKLPSLLKVAIDVSKGMNYLHQN---NIIHRDLKAANLLMDENEVVKVADFGVA  437 (558)
Q Consensus       364 ~~lV~E~~~ggsL~~~l~~~~---~~l~~~~~~~i~~qI~~aL~yLH~~---gIiHrDLKp~NILl~~~~~vkL~DFG~a  437 (558)
                      .++||||+.|++|.+++....   ..+++..++.++.||+.||.|||++   ||+||||||+|||++.++.+||+|||++
T Consensus       102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~  181 (326)
T 3uim_A          102 RLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA  181 (326)
T ss_dssp             CEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSC
T ss_pred             eEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccc
Confidence            999999999999999997643   2489999999999999999999999   9999999999999999999999999999


Q ss_pred             eecccCC--ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCC--------HHHHHHHHHh----
Q 008656          438 RVKAQSG--VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLT--------PLQAAVGVVQ----  503 (558)
Q Consensus       438 ~~~~~~~--~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~--------~~~~~~~v~~----  503 (558)
                      +......  ......||+.|+|||++.+..++.++||||||+++|+|++|..||....        ..........    
T Consensus       182 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (326)
T 3uim_A          182 KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL  261 (326)
T ss_dssp             EECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCS
T ss_pred             cccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhh
Confidence            8664332  3344569999999999999999999999999999999999999995210        1111111110    


Q ss_pred             -----cCCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHH
Q 008656          504 -----KGLRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQ  545 (558)
Q Consensus       504 -----~~~r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~  545 (558)
                           .......+...++.+.+++.+||+.||.+|||+.++++.|++
T Consensus       262 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~  308 (326)
T 3uim_A          262 EALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG  308 (326)
T ss_dssp             TTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred             hhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence                 011112233345789999999999999999999999999975


No 184
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=6.3e-43  Score=363.67  Aligned_cols=250  Identities=24%  Similarity=0.358  Sum_probs=207.5

Q ss_pred             CCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCCh---HHHHHHHHHHHHHHhccCCCceEEEeeecCCCCce
Q 008656          291 PKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINS---DMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLC  365 (558)
Q Consensus       291 ~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~---~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~  365 (558)
                      .++|++.+.||+|+||.||+|++.  ++.||||+++......   .....+.+|+.++++++||||+++++++......+
T Consensus         9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   88 (346)
T 1ua2_A            9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNIS   88 (346)
T ss_dssp             ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCE
T ss_pred             hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceE
Confidence            468999999999999999999974  7889999997643221   22346889999999999999999999999999999


Q ss_pred             eEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccC-C
Q 008656          366 IVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQS-G  444 (558)
Q Consensus       366 lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~-~  444 (558)
                      +||||+++ +|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..... .
T Consensus        89 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~  167 (346)
T 1ua2_A           89 LVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR  167 (346)
T ss_dssp             EEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCC
T ss_pred             EEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCCcc
Confidence            99999965 899999876677999999999999999999999999999999999999999999999999999765433 3


Q ss_pred             ccccCCCCCCccchhhhcC-CCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCC--------------
Q 008656          445 VMTAETGTYRWMAPEVIEH-KPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPT--------------  509 (558)
Q Consensus       445 ~~~~~~gt~~y~APEv~~~-~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~--------------  509 (558)
                      ......||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+....+......+.              
T Consensus       168 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  247 (346)
T 1ua2_A          168 AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYV  247 (346)
T ss_dssp             CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCC
T ss_pred             cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccc
Confidence            4456689999999999976 4589999999999999999999999999888777666554211110              


Q ss_pred             ------------CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          510 ------------IPKNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       510 ------------ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                                  +...+++++.+||.+||..||.+|||+.|+++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  291 (346)
T 1ua2_A          248 TFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK  291 (346)
T ss_dssp             CCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             cccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence                        01456789999999999999999999999875


No 185
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00  E-value=9.4e-43  Score=354.74  Aligned_cols=246  Identities=24%  Similarity=0.456  Sum_probs=213.4

Q ss_pred             CceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeEEE
Q 008656          292 KHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTE  369 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV~E  369 (558)
                      ++|++.+.||+|+||.||+++..  ++.||+|+++....  .....+.+|+.++++++||||+++++++......|+|||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   86 (304)
T 2jam_A            9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA--FRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ   86 (304)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc--cchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence            57999999999999999999984  78899999985432  223568899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEe---CCCCcEEEEecCcceecccCCcc
Q 008656          370 FMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM---DENEVVKVADFGVARVKAQSGVM  446 (558)
Q Consensus       370 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl---~~~~~vkL~DFG~a~~~~~~~~~  446 (558)
                      |++|++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+||++   +.++.+||+|||+++..... ..
T Consensus        87 ~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~-~~  164 (304)
T 2jam_A           87 LVSGGELFDRILE-RGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG-IM  164 (304)
T ss_dssp             CCCSCBHHHHHHH-HSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB-TT
T ss_pred             cCCCccHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC-cc
Confidence            9999999999976 4678999999999999999999999999999999999999   77889999999999754432 33


Q ss_pred             ccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCC--CCCCCCCcHHHHHHHHH
Q 008656          447 TAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLR--PTIPKNSQPKLAELLER  524 (558)
Q Consensus       447 ~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r--~~ip~~~~~~l~~Ll~~  524 (558)
                      ....||+.|+|||++.+..++.++||||||+++|+|++|..||...+.......+......  ...+..+++.+.+||.+
T Consensus       165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  244 (304)
T 2jam_A          165 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICH  244 (304)
T ss_dssp             HHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHHHHHHHH
T ss_pred             ccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHHHHHHHHH
Confidence            4456899999999999999999999999999999999999999988877666555544332  23446789999999999


Q ss_pred             hhhcCCCCCCCHHHHHH
Q 008656          525 CWQQDPALRPDFSEIIE  541 (558)
Q Consensus       525 cL~~dP~~RPs~~ell~  541 (558)
                      ||..||.+||++.++++
T Consensus       245 ~l~~dp~~Rps~~~~l~  261 (304)
T 2jam_A          245 LLEKDPNERYTCEKALS  261 (304)
T ss_dssp             HHCSSTTTSCCHHHHHT
T ss_pred             HcCCChhHCcCHHHHhc
Confidence            99999999999999985


No 186
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00  E-value=1.5e-43  Score=365.22  Aligned_cols=248  Identities=23%  Similarity=0.377  Sum_probs=203.8

Q ss_pred             CceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeEEE
Q 008656          292 KHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTE  369 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV~E  369 (558)
                      ++|++.++||+|+||.||+|++.  ++.||||+++..... .....+.+|+.++++++||||+++++++......|+|||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE   80 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc-ccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEec
Confidence            57999999999999999999984  778999999754321 112245679999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccC-Ccccc
Q 008656          370 FMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQS-GVMTA  448 (558)
Q Consensus       370 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~-~~~~~  448 (558)
                      |++ ++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..... .....
T Consensus        81 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~  159 (324)
T 3mtl_A           81 YLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDN  159 (324)
T ss_dssp             CCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC---------
T ss_pred             ccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCCcccccc
Confidence            996 5999999887777999999999999999999999999999999999999999999999999999765433 23445


Q ss_pred             CCCCCCccchhhhcC-CCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCC------------------
Q 008656          449 ETGTYRWMAPEVIEH-KPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPT------------------  509 (558)
Q Consensus       449 ~~gt~~y~APEv~~~-~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~------------------  509 (558)
                      ..||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+....+......+.                  
T Consensus       160 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (324)
T 3mtl_A          160 EVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNY  239 (324)
T ss_dssp             ---CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCC
T ss_pred             ccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhccccc
Confidence            678999999999976 6789999999999999999999999999887766555443211110                  


Q ss_pred             ----------CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          510 ----------IPKNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       510 ----------ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                                ....+++++.+||.+||+.||.+|||+.|+++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  281 (324)
T 3mtl_A          240 PKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK  281 (324)
T ss_dssp             CCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             ccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence                      11346789999999999999999999999975


No 187
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00  E-value=3.3e-43  Score=362.97  Aligned_cols=250  Identities=20%  Similarity=0.377  Sum_probs=214.6

Q ss_pred             Cceeee-eeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhcc-CCCceEEEeeecCCCCceeE
Q 008656          292 KHLKFG-SKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVR-HKNVVQFIGACTKPPSLCIV  367 (558)
Q Consensus       292 ~~~~i~-~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~-HpnIv~l~g~~~~~~~~~lV  367 (558)
                      ++|.+. ++||+|+||.||++.+.  ++.||+|+++...........+.+|+.+++.+. ||||+++++++.....+|+|
T Consensus        28 ~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv  107 (327)
T 3lm5_A           28 NFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILI  107 (327)
T ss_dssp             HHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEE
Confidence            467776 88999999999999985  788999999876555555678999999999995 69999999999999999999


Q ss_pred             EEecCCCCHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCC---CCcEEEEecCcceecccC
Q 008656          368 TEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDE---NEVVKVADFGVARVKAQS  443 (558)
Q Consensus       368 ~E~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~---~~~vkL~DFG~a~~~~~~  443 (558)
                      |||+.|++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.   ++.+||+|||+++.....
T Consensus       108 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~  187 (327)
T 3lm5_A          108 LEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA  187 (327)
T ss_dssp             EECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---
T ss_pred             EEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCc
Confidence            9999999999998543 357999999999999999999999999999999999999997   789999999999877665


Q ss_pred             CccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCC--CCCCCCCCcHHHHHH
Q 008656          444 GVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGL--RPTIPKNSQPKLAEL  521 (558)
Q Consensus       444 ~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~--r~~ip~~~~~~l~~L  521 (558)
                      .......||+.|+|||++.+..++.++||||||+++|+|++|..||...+..+....+.....  .......+++.+.+|
T Consensus       188 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  267 (327)
T 3lm5_A          188 CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDF  267 (327)
T ss_dssp             ------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHH
T ss_pred             cccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchhhcccCHHHHHH
Confidence            555667899999999999999999999999999999999999999999888777666554433  334446789999999


Q ss_pred             HHHhhhcCCCCCCCHHHHHH
Q 008656          522 LERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       522 l~~cL~~dP~~RPs~~ell~  541 (558)
                      |.+||+.||.+||++.++++
T Consensus       268 i~~~L~~dP~~Rpt~~~ll~  287 (327)
T 3lm5_A          268 IQSLLVKNPEKRPTAEICLS  287 (327)
T ss_dssp             HHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHHcCCChhhCcCHHHHhC
Confidence            99999999999999999874


No 188
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00  E-value=4.1e-44  Score=380.08  Aligned_cols=260  Identities=23%  Similarity=0.371  Sum_probs=216.1

Q ss_pred             eCCCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCC--Cc
Q 008656          289 IDPKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPP--SL  364 (558)
Q Consensus       289 i~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~--~~  364 (558)
                      +...+|++.++||+|+||.||+|.+.  ++.||||+++..... .....+.+|+.++++++||||+++++++....  ..
T Consensus         6 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~   84 (396)
T 4eut_A            6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL-RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHK   84 (396)
T ss_dssp             CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG-SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCE
T ss_pred             CCCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEecccccc-chHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCee
Confidence            34578999999999999999999985  788999999864322 22467789999999999999999999987654  67


Q ss_pred             eeEEEecCCCCHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEe----CCCCcEEEEecCcce
Q 008656          365 CIVTEFMSGGSVYDYLHKLKG--VFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM----DENEVVKVADFGVAR  438 (558)
Q Consensus       365 ~lV~E~~~ggsL~~~l~~~~~--~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl----~~~~~vkL~DFG~a~  438 (558)
                      |+||||++|++|.+++.....  .+++..++.++.||+.||+|||++||+||||||+|||+    +.++.+||+|||+++
T Consensus        85 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~  164 (396)
T 4eut_A           85 VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR  164 (396)
T ss_dssp             EEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred             EEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence            999999999999999976433  38999999999999999999999999999999999999    778889999999998


Q ss_pred             ecccCCccccCCCCCCccchhhhcC--------CCCCchHHHHHHHHHHHHHHcCCCCCCCCC----HHHHHHHHHhcCC
Q 008656          439 VKAQSGVMTAETGTYRWMAPEVIEH--------KPYDHKADVFSFGIVLWELLTGKLPYEYLT----PLQAAVGVVQKGL  506 (558)
Q Consensus       439 ~~~~~~~~~~~~gt~~y~APEv~~~--------~~~s~ksDVwSlGilL~elltG~~Pf~~~~----~~~~~~~v~~~~~  506 (558)
                      ............||+.|+|||++.+        ..++.++|||||||++|||++|+.||....    ..+....+.....
T Consensus       165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p  244 (396)
T 4eut_A          165 ELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP  244 (396)
T ss_dssp             ECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCC
T ss_pred             EccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCC
Confidence            7766655666789999999999865        568889999999999999999999996432    2333333333211


Q ss_pred             C-----------------------CCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHH
Q 008656          507 R-----------------------PTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKE  549 (558)
Q Consensus       507 r-----------------------~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~  549 (558)
                      .                       ..++..+++.+.++|.+||..||.+||++.++++.+.++++.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~  310 (396)
T 4eut_A          245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR  310 (396)
T ss_dssp             TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred             cccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence            0                       012233567899999999999999999999999999888764


No 189
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00  E-value=5.3e-43  Score=355.14  Aligned_cols=248  Identities=28%  Similarity=0.499  Sum_probs=211.1

Q ss_pred             CceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeEEE
Q 008656          292 KHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTE  369 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV~E  369 (558)
                      ++|++.+.||+|+||.||+|++.  ++.||+|++....  ......+.+|+.+++.++||||+++++++...+..++|||
T Consensus        19 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   96 (302)
T 2j7t_A           19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE   96 (302)
T ss_dssp             GTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred             cceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC--HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence            67999999999999999999985  7789999987543  2335778999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccC-Ccccc
Q 008656          370 FMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQS-GVMTA  448 (558)
Q Consensus       370 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~-~~~~~  448 (558)
                      |++|++|.+++......+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++...... .....
T Consensus        97 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  176 (302)
T 2j7t_A           97 FCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS  176 (302)
T ss_dssp             CCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC---
T ss_pred             eCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCcccccccccccc
Confidence            99999999999876778999999999999999999999999999999999999999999999999987533221 12234


Q ss_pred             CCCCCCccchhhh-----cCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCC-CCCCCCCcHHHHHHH
Q 008656          449 ETGTYRWMAPEVI-----EHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLR-PTIPKNSQPKLAELL  522 (558)
Q Consensus       449 ~~gt~~y~APEv~-----~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r-~~ip~~~~~~l~~Ll  522 (558)
                      ..||+.|+|||++     .+..++.++||||||+++|+|++|..||...+.......+...... ...+..++..+.++|
T Consensus       177 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  256 (302)
T 2j7t_A          177 FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFL  256 (302)
T ss_dssp             --CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHH
T ss_pred             ccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcccCCccccCHHHHHHH
Confidence            5789999999998     4778999999999999999999999999998887766665544322 234567889999999


Q ss_pred             HHhhhcCCCCCCCHHHHHH
Q 008656          523 ERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       523 ~~cL~~dP~~RPs~~ell~  541 (558)
                      .+||..||.+|||+.++++
T Consensus       257 ~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          257 KIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             HHHSCSCTTTSCCHHHHTT
T ss_pred             HHHcccChhhCCCHHHHhc
Confidence            9999999999999999974


No 190
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00  E-value=1.7e-43  Score=365.14  Aligned_cols=255  Identities=25%  Similarity=0.392  Sum_probs=213.5

Q ss_pred             ceeeCCCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCC
Q 008656          286 VWEIDPKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS  363 (558)
Q Consensus       286 ~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~  363 (558)
                      .+....++|++.+.||+|+||.||++++.  ++.||||++..........+.+.+|+.++++++||||+++++++...+.
T Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   98 (331)
T 4aaa_A           19 LYFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKR   98 (331)
T ss_dssp             CCCBCGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred             hhhhhhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCE
Confidence            34455679999999999999999999985  7889999998776666667788999999999999999999999999999


Q ss_pred             ceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccC
Q 008656          364 LCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQS  443 (558)
Q Consensus       364 ~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~  443 (558)
                      .|+||||+++++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus        99 ~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  177 (331)
T 4aaa_A           99 WYLVFEFVDHTILDDLELF-PNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP  177 (331)
T ss_dssp             EEEEEECCSEEHHHHHHHS-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred             EEEEEecCCcchHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCC
Confidence            9999999999888887654 567999999999999999999999999999999999999999999999999999765443


Q ss_pred             -CccccCCCCCCccchhhhcCC-CCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcC----------------
Q 008656          444 -GVMTAETGTYRWMAPEVIEHK-PYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKG----------------  505 (558)
Q Consensus       444 -~~~~~~~gt~~y~APEv~~~~-~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~----------------  505 (558)
                       .......||+.|+|||++.+. .++.++|||||||++|+|++|..||...+..+....+....                
T Consensus       178 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (331)
T 4aaa_A          178 GEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPV  257 (331)
T ss_dssp             ------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGG
T ss_pred             ccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccc
Confidence             334556799999999999875 78999999999999999999999999888766554443210                


Q ss_pred             ---CC-CC---------CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          506 ---LR-PT---------IPKNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       506 ---~r-~~---------ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                         .+ +.         ....+++.+.+||.+||+.||.+|||+.|+++
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  306 (331)
T 4aaa_A          258 FAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH  306 (331)
T ss_dssp             GTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             cccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence               00 00         11357899999999999999999999999874


No 191
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00  E-value=7.8e-43  Score=352.46  Aligned_cols=248  Identities=26%  Similarity=0.478  Sum_probs=216.7

Q ss_pred             CceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeEEE
Q 008656          292 KHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTE  369 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV~E  369 (558)
                      ++|++.++||+|+||.||+++.  .++.||||++............+.+|+.++++++||||+++++++......++|||
T Consensus        22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  101 (287)
T 2wei_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE  101 (287)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEE
Confidence            5899999999999999999998  47889999997655444456789999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCC---CcEEEEecCcceecccCCcc
Q 008656          370 FMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN---EVVKVADFGVARVKAQSGVM  446 (558)
Q Consensus       370 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~---~~vkL~DFG~a~~~~~~~~~  446 (558)
                      |+.+++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+||+++.+   +.+||+|||++.........
T Consensus       102 ~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~~  180 (287)
T 2wei_A          102 LYTGGELFDEIIK-RKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM  180 (287)
T ss_dssp             CCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSSC
T ss_pred             ccCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCCcc
Confidence            9999999999876 4579999999999999999999999999999999999999754   46999999999766555444


Q ss_pred             ccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCC--CCCcHHHHHHHHH
Q 008656          447 TAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIP--KNSQPKLAELLER  524 (558)
Q Consensus       447 ~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip--~~~~~~l~~Ll~~  524 (558)
                      ....||+.|+|||++.+. ++.++||||||+++|+|++|..||...+..+....+.........+  ..+++++.++|.+
T Consensus       181 ~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  259 (287)
T 2wei_A          181 KDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRK  259 (287)
T ss_dssp             SCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCHHHHHHHHH
T ss_pred             ccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCHHHHHHHHH
Confidence            455689999999999765 8999999999999999999999999988777666555544333333  5788999999999


Q ss_pred             hhhcCCCCCCCHHHHHH
Q 008656          525 CWQQDPALRPDFSEIIE  541 (558)
Q Consensus       525 cL~~dP~~RPs~~ell~  541 (558)
                      ||..||.+|||+.++++
T Consensus       260 ~l~~dp~~Rps~~ell~  276 (287)
T 2wei_A          260 MLTFHPSLRITATQCLE  276 (287)
T ss_dssp             HTCSSGGGSCCHHHHHH
T ss_pred             HcccChhhCcCHHHHhc
Confidence            99999999999999986


No 192
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00  E-value=1.8e-42  Score=356.05  Aligned_cols=243  Identities=19%  Similarity=0.359  Sum_probs=204.6

Q ss_pred             CCCceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCChHHHHHHHHHHHHHHhcc-CCCceEEEeeecC--CCCc
Q 008656          290 DPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVR-HKNVVQFIGACTK--PPSL  364 (558)
Q Consensus       290 ~~~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~-HpnIv~l~g~~~~--~~~~  364 (558)
                      ..++|++.++||+|+||.||+|.+  .++.||||+++...     .+.+.+|+.++++++ ||||+++++++..  ....
T Consensus        34 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~  108 (330)
T 3nsz_A           34 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK-----KKKIKREIKILENLRGGPNIITLADIVKDPVSRTP  108 (330)
T ss_dssp             EGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC-----HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCE
T ss_pred             CCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc-----hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCce
Confidence            347899999999999999999987  57889999998532     367889999999997 9999999999987  5678


Q ss_pred             eeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCC-cEEEEecCcceecccC
Q 008656          365 CIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENE-VVKVADFGVARVKAQS  443 (558)
Q Consensus       365 ~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~-~vkL~DFG~a~~~~~~  443 (558)
                      ++||||+.+++|.+++..    +++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+++.....
T Consensus       109 ~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~  184 (330)
T 3nsz_A          109 ALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG  184 (330)
T ss_dssp             EEEEECCCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred             EEEEeccCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC
Confidence            999999999999998853    89999999999999999999999999999999999999776 8999999999877666


Q ss_pred             CccccCCCCCCccchhhhcC-CCCCchHHHHHHHHHHHHHHcCCCCCCCCC-HHHHHHHHH------------hcC----
Q 008656          444 GVMTAETGTYRWMAPEVIEH-KPYDHKADVFSFGIVLWELLTGKLPYEYLT-PLQAAVGVV------------QKG----  505 (558)
Q Consensus       444 ~~~~~~~gt~~y~APEv~~~-~~~s~ksDVwSlGilL~elltG~~Pf~~~~-~~~~~~~v~------------~~~----  505 (558)
                      .......||..|+|||++.+ ..++.++|||||||++|+|++|..||.... .......+.            ...    
T Consensus       185 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  264 (330)
T 3nsz_A          185 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIEL  264 (330)
T ss_dssp             CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCC
T ss_pred             CccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhcccc
Confidence            66667789999999999977 779999999999999999999999995432 222211111            000    


Q ss_pred             -------------------CCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          506 -------------------LRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       506 -------------------~r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                                         .....+..+++++.+||.+||+.||.+|||+.|+++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  319 (330)
T 3nsz_A          265 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  319 (330)
T ss_dssp             CTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             ccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence                               011112237899999999999999999999999985


No 193
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00  E-value=1.2e-42  Score=363.95  Aligned_cols=255  Identities=16%  Similarity=0.255  Sum_probs=214.8

Q ss_pred             CCceeeCCCceeeeeeeeecCceEEEEEE-------ECCceEEEEEecCCCCChHHHHHHHHHHHHHHhcc---CCCceE
Q 008656          284 TDVWEIDPKHLKFGSKVASGSYGDLYRGT-------YCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVR---HKNVVQ  353 (558)
Q Consensus       284 ~~~~~i~~~~~~i~~~LG~GsfG~Vy~g~-------~~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~---HpnIv~  353 (558)
                      ...+++..++|++.++||+|+||.||+|+       ..++.||||+++...     ..++..|+.+++.++   |+||++
T Consensus        57 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~e~~~~~~l~~~~~~~iv~  131 (365)
T 3e7e_A           57 KTEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN-----PWEFYIGTQLMERLKPSMQHMFMK  131 (365)
T ss_dssp             SCEEECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC-----HHHHHHHHHHHHHSCGGGGGGBCC
T ss_pred             ceeEEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC-----hhHHHHHHHHHHHhhhhhhhhhhh
Confidence            35778889999999999999999999993       357889999998542     356778888888887   899999


Q ss_pred             EEeeecCCCCceeEEEecCCCCHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCC----
Q 008656          354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKL----KGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDE----  425 (558)
Q Consensus       354 l~g~~~~~~~~~lV~E~~~ggsL~~~l~~~----~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~----  425 (558)
                      +++++...+..|+||||++||+|.+++...    ...+++..++.++.||+.||+|||++||+||||||+|||++.    
T Consensus       132 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~  211 (365)
T 3e7e_A          132 FYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLE  211 (365)
T ss_dssp             EEEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTC
T ss_pred             hheeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccC
Confidence            999999999999999999999999999753    456999999999999999999999999999999999999998    


Q ss_pred             -------CCcEEEEecCcceecc---cCCccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHH
Q 008656          426 -------NEVVKVADFGVARVKA---QSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPL  495 (558)
Q Consensus       426 -------~~~vkL~DFG~a~~~~---~~~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~  495 (558)
                             ++.+||+|||+++...   .........||+.|||||++.+..|+.++|||||||++|||++|+.||......
T Consensus       212 ~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~  291 (365)
T 3e7e_A          212 QDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG  291 (365)
T ss_dssp             C------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT
T ss_pred             ccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC
Confidence                   8999999999997543   233455678999999999999999999999999999999999999999643321


Q ss_pred             HHHHHHHhcCCCCCC-CCCCcHHHHHHHHHhhhcCCCCC-CCHHHHHHHHHHHHHHH
Q 008656          496 QAAVGVVQKGLRPTI-PKNSQPKLAELLERCWQQDPALR-PDFSEIIEILQQIAKEV  550 (558)
Q Consensus       496 ~~~~~v~~~~~r~~i-p~~~~~~l~~Ll~~cL~~dP~~R-Ps~~ell~~L~~l~~~~  550 (558)
                      .     .  .....+ ....++.+.+++.+||+.+|.+| |++.++.+.|++++.+.
T Consensus       292 ~-----~--~~~~~~~~~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~  341 (365)
T 3e7e_A          292 E-----C--KPEGLFRRLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQH  341 (365)
T ss_dssp             E-----E--EECSCCTTCSSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHH
T ss_pred             c-----e--eechhccccCcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHh
Confidence            1     0  011111 11347789999999999999999 67899999888887654


No 194
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00  E-value=1.7e-42  Score=364.36  Aligned_cols=247  Identities=25%  Similarity=0.353  Sum_probs=200.9

Q ss_pred             CCceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCC------
Q 008656          291 PKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPP------  362 (558)
Q Consensus       291 ~~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~------  362 (558)
                      .++|++.+.||+|+||.||+|.+  .++.||||++............+.+|+.+++.++||||+++++++....      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            36899999999999999999987  4788999999876556666788999999999999999999999987654      


Q ss_pred             CceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceeccc
Q 008656          363 SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ  442 (558)
Q Consensus       363 ~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~  442 (558)
                      ..|+||||+. ++|.+++.   ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus       104 ~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~  179 (371)
T 2xrw_A          104 DVYIVMELMD-ANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT  179 (371)
T ss_dssp             EEEEEEECCS-EEHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC------
T ss_pred             ceEEEEEcCC-CCHHHHHh---hccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeeccccccc
Confidence            6799999996 57888884   4589999999999999999999999999999999999999999999999999987665


Q ss_pred             CCccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCC--------------
Q 008656          443 SGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRP--------------  508 (558)
Q Consensus       443 ~~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~--------------  508 (558)
                      ........||+.|+|||++.+..|+.++|||||||++|+|++|..||.+.+..+....++.....+              
T Consensus       180 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  259 (371)
T 2xrw_A          180 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRT  259 (371)
T ss_dssp             ----------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHH
T ss_pred             ccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHH
Confidence            555566789999999999999999999999999999999999999999988776655554321111              


Q ss_pred             ------CC--------------CC------CCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          509 ------TI--------------PK------NSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       509 ------~i--------------p~------~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                            ..              |.      ..++.+.+||.+||..||.+|||+.|+++
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  318 (371)
T 2xrw_A          260 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ  318 (371)
T ss_dssp             HHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence                  00              00      11578999999999999999999999985


No 195
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00  E-value=4.2e-44  Score=377.14  Aligned_cols=251  Identities=16%  Similarity=0.195  Sum_probs=201.1

Q ss_pred             eCCCceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCC-ChHHHHHHHHHH---HHHHhccCCCceEEE-------
Q 008656          289 IDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERI-NSDMQKEFAQEV---FIMRKVRHKNVVQFI-------  355 (558)
Q Consensus       289 i~~~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~-~~~~~~~~~~Ev---~iL~~l~HpnIv~l~-------  355 (558)
                      ...++|++.+.||+|+||.||+|++  +++.||||+++.... .....+.+.+|+   .++++++||||++++       
T Consensus        70 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~  149 (377)
T 3byv_A           70 ERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPF  149 (377)
T ss_dssp             CCCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCS
T ss_pred             CCCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhh
Confidence            3456899999999999999999986  488999999975432 344567899999   555566899999998       


Q ss_pred             eeecCCC-----------------CceeEEEecCCCCHHHHHHhhccCCCH-------HHHHHHHHHHHHHHHHHHHCCc
Q 008656          356 GACTKPP-----------------SLCIVTEFMSGGSVYDYLHKLKGVFKL-------PSLLKVAIDVSKGMNYLHQNNI  411 (558)
Q Consensus       356 g~~~~~~-----------------~~~lV~E~~~ggsL~~~l~~~~~~l~~-------~~~~~i~~qI~~aL~yLH~~gI  411 (558)
                      +++..++                 ..|+||||+ +|+|.+++... +.+++       ..++.|+.||+.||+|||++||
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~-~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i  227 (377)
T 3byv_A          150 DLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVL-LSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGL  227 (377)
T ss_dssp             EEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHH-HHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             hhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhc-cccccccccccHHHHHHHHHHHHHHHHHHHhCCe
Confidence            5444443                 378999999 68999999764 33444       7888899999999999999999


Q ss_pred             eeccCCCCcEEeCCCCcEEEEecCcceecccCCccccCCCCCCccchhhhcCC-----------CCCchHHHHHHHHHHH
Q 008656          412 IHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHK-----------PYDHKADVFSFGIVLW  480 (558)
Q Consensus       412 iHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~APEv~~~~-----------~~s~ksDVwSlGilL~  480 (558)
                      +||||||+|||++.++.+||+|||+++....  ......| +.|+|||++.+.           .|+.++|||||||++|
T Consensus       228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~--~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~  304 (377)
T 3byv_A          228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA--RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIY  304 (377)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCGGGCEETTC--EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHH
T ss_pred             ecCCCCHHHEEEcCCCCEEEEechhheecCC--cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHH
Confidence            9999999999999999999999999986433  3445677 999999999887           8999999999999999


Q ss_pred             HHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH--HHHHHHHHH
Q 008656          481 ELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIE--ILQQIAKEV  550 (558)
Q Consensus       481 elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~--~L~~l~~~~  550 (558)
                      ||++|+.||...+.......+      ...+..+++++.+||.+||+.||.+||++.++++  .++++.+.+
T Consensus       305 elltg~~Pf~~~~~~~~~~~~------~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~~~~  370 (377)
T 3byv_A          305 WIWCADLPITKDAALGGSEWI------FRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRTEL  370 (377)
T ss_dssp             HHHHSSCCC------CCSGGG------GSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHHHHHH
T ss_pred             HHHHCCCCCcccccccchhhh------hhhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHHHHHH
Confidence            999999999765543322111      1223678899999999999999999999999985  566665544


No 196
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00  E-value=3.3e-42  Score=369.94  Aligned_cols=253  Identities=23%  Similarity=0.301  Sum_probs=202.5

Q ss_pred             ceeeCCCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCC--
Q 008656          286 VWEIDPKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKP--  361 (558)
Q Consensus       286 ~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~--  361 (558)
                      .|.+ .++|++.+.||+|+||.||+|.+.  ++.||||+++.........+.+.+|+.+|++++||||+++++++...  
T Consensus        21 ~~~i-~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~   99 (432)
T 3n9x_A           21 NVHV-PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDL   99 (432)
T ss_dssp             GCCC-CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCT
T ss_pred             ccee-cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCC
Confidence            4444 378999999999999999999884  67899999987655666678899999999999999999999998765  


Q ss_pred             ---CCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcce
Q 008656          362 ---PSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR  438 (558)
Q Consensus       362 ---~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~  438 (558)
                         ..+|+||||+. ++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++
T Consensus       100 ~~~~~~~lv~e~~~-~~L~~~~~~-~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~  177 (432)
T 3n9x_A          100 LKFDELYIVLEIAD-SDLKKLFKT-PIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLAR  177 (432)
T ss_dssp             TTCCCEEEEEECCS-EEHHHHHHS-SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             CcCCeEEEEEecCC-cCHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCcc
Confidence               56899999995 699999976 5679999999999999999999999999999999999999999999999999998


Q ss_pred             ecccCC-----------------------ccccCCCCCCccchhhh-cCCCCCchHHHHHHHHHHHHHHcCCC-------
Q 008656          439 VKAQSG-----------------------VMTAETGTYRWMAPEVI-EHKPYDHKADVFSFGIVLWELLTGKL-------  487 (558)
Q Consensus       439 ~~~~~~-----------------------~~~~~~gt~~y~APEv~-~~~~~s~ksDVwSlGilL~elltG~~-------  487 (558)
                      ......                       .++...||+.|+|||++ ....|+.++|||||||++|||++|..       
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~  257 (432)
T 3n9x_A          178 TINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPT  257 (432)
T ss_dssp             EC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGG
T ss_pred             cccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccc
Confidence            654332                       24667899999999986 56679999999999999999998544       


Q ss_pred             ----CCCCCCH-----------------HHHHHHHHh----------------------cCCCCCC-------CCCCcHH
Q 008656          488 ----PYEYLTP-----------------LQAAVGVVQ----------------------KGLRPTI-------PKNSQPK  517 (558)
Q Consensus       488 ----Pf~~~~~-----------------~~~~~~v~~----------------------~~~r~~i-------p~~~~~~  517 (558)
                          +|.+.+.                 ......+..                      .......       ...++++
T Consensus       258 ~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  337 (432)
T 3n9x_A          258 NRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDD  337 (432)
T ss_dssp             GCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHH
T ss_pred             cccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHH
Confidence                3433221                 011101100                      0011111       1457899


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          518 LAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       518 l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                      +.+||.+||..||.+|||+.|+++
T Consensus       338 ~~dLl~~mL~~dP~~R~ta~e~L~  361 (432)
T 3n9x_A          338 GINLLESMLKFNPNKRITIDQALD  361 (432)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHhcCCcccCCCHHHHhc
Confidence            999999999999999999999975


No 197
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00  E-value=6.7e-43  Score=363.32  Aligned_cols=250  Identities=26%  Similarity=0.411  Sum_probs=209.8

Q ss_pred             CCceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecC--------
Q 008656          291 PKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTK--------  360 (558)
Q Consensus       291 ~~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~--------  360 (558)
                      .++|++.++||+|+||.||+|++  +++.||||++............+.+|+.+++.++||||+++++++..        
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   95 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   95 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence            36899999999999999999998  47889999997765554445678899999999999999999999865        


Q ss_pred             CCCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceec
Q 008656          361 PPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVK  440 (558)
Q Consensus       361 ~~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~  440 (558)
                      .+.+|+||||++ ++|.+.+......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus        96 ~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~  174 (351)
T 3mi9_A           96 KGSIYLVFDFCE-HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAF  174 (351)
T ss_dssp             -CEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             CceEEEEEeccC-CCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhcccc
Confidence            346899999996 5888888776678999999999999999999999999999999999999999999999999999765


Q ss_pred             cc-----CCccccCCCCCCccchhhhcC-CCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcC--CCCCCCC
Q 008656          441 AQ-----SGVMTAETGTYRWMAPEVIEH-KPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKG--LRPTIPK  512 (558)
Q Consensus       441 ~~-----~~~~~~~~gt~~y~APEv~~~-~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~--~r~~ip~  512 (558)
                      ..     ........||+.|+|||++.+ ..++.++|||||||++|+|++|..||...+.......+....  ..+....
T Consensus       175 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  254 (351)
T 3mi9_A          175 SLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWP  254 (351)
T ss_dssp             CCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTST
T ss_pred             cccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcc
Confidence            42     223345678999999999976 568999999999999999999999999888766555443321  1111111


Q ss_pred             C----------------------------CcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          513 N----------------------------SQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       513 ~----------------------------~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                      .                            .++.+.+||.+||+.||.+|||+.|+++
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  311 (351)
T 3mi9_A          255 NVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN  311 (351)
T ss_dssp             TGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence            1                            2678999999999999999999999875


No 198
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00  E-value=1.7e-42  Score=353.64  Aligned_cols=250  Identities=30%  Similarity=0.473  Sum_probs=211.6

Q ss_pred             eeCCCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCce
Q 008656          288 EIDPKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLC  365 (558)
Q Consensus       288 ~i~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~  365 (558)
                      ....++|++.+.||+|+||.||+|.+.  ++.||||++.....    ...+.+|+.+++.++||||+++++++.....+|
T Consensus        25 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  100 (314)
T 3com_A           25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD----LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLW  100 (314)
T ss_dssp             -----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSC----CHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred             hcchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHH----HHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEE
Confidence            344578999999999999999999985  78899999986532    356889999999999999999999999888999


Q ss_pred             eEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccC-C
Q 008656          366 IVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQS-G  444 (558)
Q Consensus       366 lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~-~  444 (558)
                      +||||+++++|.+++......+++..++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||++...... .
T Consensus       101 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~  180 (314)
T 3com_A          101 IVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA  180 (314)
T ss_dssp             EEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS
T ss_pred             EEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc
Confidence            999999999999999866778999999999999999999999999999999999999999999999999999765443 2


Q ss_pred             ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCC-CCCCCCCCcHHHHHHHH
Q 008656          445 VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGL-RPTIPKNSQPKLAELLE  523 (558)
Q Consensus       445 ~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~-r~~ip~~~~~~l~~Ll~  523 (558)
                      ......||+.|+|||++.+..++.++||||||+++|+|++|..||...........+..... ....+..+++.+.+||.
T Consensus       181 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  260 (314)
T 3com_A          181 KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVK  260 (314)
T ss_dssp             CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHH
T ss_pred             ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHHHHH
Confidence            33455789999999999999999999999999999999999999998887766554433221 12235567899999999


Q ss_pred             HhhhcCCCCCCCHHHHHH
Q 008656          524 RCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       524 ~cL~~dP~~RPs~~ell~  541 (558)
                      +||..||.+||++.++++
T Consensus       261 ~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          261 QCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             HHTCSCTTTSCCHHHHTT
T ss_pred             HHccCChhhCcCHHHHHh
Confidence            999999999999999975


No 199
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=1.2e-42  Score=366.91  Aligned_cols=253  Identities=22%  Similarity=0.343  Sum_probs=210.0

Q ss_pred             eeCCCceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeec------
Q 008656          288 EIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACT------  359 (558)
Q Consensus       288 ~i~~~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~------  359 (558)
                      +...++|++++.||+|+||.||+|++  +++.||||++.....      ...+|+.+|+.++||||+++++++.      
T Consensus         3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~   76 (383)
T 3eb0_A            3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR------YKNRELDIMKVLDHVNIIKLVDYFYTTGDEE   76 (383)
T ss_dssp             ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHTTCCCTTBCCEEEEEEEC----
T ss_pred             ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc------hHHHHHHHHHHcCCCCccchhheeeecCccc
Confidence            45567899999999999999999987  578899999875432      2336999999999999999999883      


Q ss_pred             --------------------------------CCCCceeEEEecCCCCHHHHHHh---hccCCCHHHHHHHHHHHHHHHH
Q 008656          360 --------------------------------KPPSLCIVTEFMSGGSVYDYLHK---LKGVFKLPSLLKVAIDVSKGMN  404 (558)
Q Consensus       360 --------------------------------~~~~~~lV~E~~~ggsL~~~l~~---~~~~l~~~~~~~i~~qI~~aL~  404 (558)
                                                      ....+++||||++ ++|.+.+..   ....+++..++.++.||+.||.
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~  155 (383)
T 3eb0_A           77 PKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVG  155 (383)
T ss_dssp             ---------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence                                            2334789999996 588887753   2467999999999999999999


Q ss_pred             HHHHCCceeccCCCCcEEeC-CCCcEEEEecCcceecccCCccccCCCCCCccchhhhcCC-CCCchHHHHHHHHHHHHH
Q 008656          405 YLHQNNIIHRDLKAANLLMD-ENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHK-PYDHKADVFSFGIVLWEL  482 (558)
Q Consensus       405 yLH~~gIiHrDLKp~NILl~-~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~APEv~~~~-~~s~ksDVwSlGilL~el  482 (558)
                      |||++||+||||||+|||++ .++.+||+|||+++............||+.|+|||++.+. .|+.++|||||||++|+|
T Consensus       156 ~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el  235 (383)
T 3eb0_A          156 FIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGEL  235 (383)
T ss_dssp             HHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHH
T ss_pred             HHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHH
Confidence            99999999999999999997 6889999999999877666666677899999999999875 499999999999999999


Q ss_pred             HcCCCCCCCCCHHHHHHHHHhcCCC---------------------------CCCCCCCcHHHHHHHHHhhhcCCCCCCC
Q 008656          483 LTGKLPYEYLTPLQAAVGVVQKGLR---------------------------PTIPKNSQPKLAELLERCWQQDPALRPD  535 (558)
Q Consensus       483 ltG~~Pf~~~~~~~~~~~v~~~~~r---------------------------~~ip~~~~~~l~~Ll~~cL~~dP~~RPs  535 (558)
                      ++|+.||.+.+..+....++.....                           ..++..+++++.+||.+||..||.+|||
T Consensus       236 l~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t  315 (383)
T 3eb0_A          236 ILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRIN  315 (383)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCC
T ss_pred             HhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCC
Confidence            9999999998887766665432111                           1145668899999999999999999999


Q ss_pred             HHHHHH--HHHHHH
Q 008656          536 FSEIIE--ILQQIA  547 (558)
Q Consensus       536 ~~ell~--~L~~l~  547 (558)
                      +.|+++  .++++.
T Consensus       316 ~~e~l~hp~f~~~~  329 (383)
T 3eb0_A          316 PYEAMAHPFFDHLR  329 (383)
T ss_dssp             HHHHHTSGGGHHHH
T ss_pred             HHHHhcCHHHHHHH
Confidence            999984  455544


No 200
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00  E-value=5.9e-43  Score=364.84  Aligned_cols=243  Identities=24%  Similarity=0.439  Sum_probs=206.9

Q ss_pred             CceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhc-cCCCceEEEeeecCCCCceeEE
Q 008656          292 KHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKV-RHKNVVQFIGACTKPPSLCIVT  368 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l-~HpnIv~l~g~~~~~~~~~lV~  368 (558)
                      ++|++.+.||+|+||.||++.+.  ++.||||+++....      .+.+|+.++.++ +||||+++++++.....+|+||
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~   95 (342)
T 2qr7_A           22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR------DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT   95 (342)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred             ccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence            57999999999999999999984  77899999986532      234688888888 7999999999999999999999


Q ss_pred             EecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCC----CcEEEEecCcceecccC-
Q 008656          369 EFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN----EVVKVADFGVARVKAQS-  443 (558)
Q Consensus       369 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~----~~vkL~DFG~a~~~~~~-  443 (558)
                      ||++||+|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||+..+    +.+||+|||+++..... 
T Consensus        96 E~~~gg~L~~~i~~-~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~  174 (342)
T 2qr7_A           96 ELMKGGELLDKILR-QKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN  174 (342)
T ss_dssp             CCCCSCBHHHHHHT-CTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT
T ss_pred             eCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC
Confidence            99999999999976 5679999999999999999999999999999999999998543    35999999999865443 


Q ss_pred             CccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCC---CHHHHHHHHHhcCCC--CCCCCCCcHHH
Q 008656          444 GVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYL---TPLQAAVGVVQKGLR--PTIPKNSQPKL  518 (558)
Q Consensus       444 ~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~---~~~~~~~~v~~~~~r--~~ip~~~~~~l  518 (558)
                      .......||+.|+|||++.+..|+.++|||||||++|+|++|..||...   +..+....+......  ...+..+++++
T Consensus       175 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~  254 (342)
T 2qr7_A          175 GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTA  254 (342)
T ss_dssp             CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHHH
T ss_pred             CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCCHHH
Confidence            3445668999999999999888999999999999999999999999753   444444444433322  22346789999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHH
Q 008656          519 AELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       519 ~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                      .+||.+||..||.+||++.++++
T Consensus       255 ~~li~~~L~~dP~~R~t~~~il~  277 (342)
T 2qr7_A          255 KDLVSKMLHVDPHQRLTAALVLR  277 (342)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHCCCChhHCcCHHHHhc
Confidence            99999999999999999999875


No 201
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00  E-value=1.2e-42  Score=354.66  Aligned_cols=258  Identities=24%  Similarity=0.452  Sum_probs=200.7

Q ss_pred             CCCceeeCCCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecC
Q 008656          283 GTDVWEIDPKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTK  360 (558)
Q Consensus       283 ~~~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~  360 (558)
                      +...|.+..++|++.+.||+|+||.||++.+.  ++.||||+++.........+.+.++..+++.++||||+++++++..
T Consensus        16 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~   95 (318)
T 2dyl_A           16 GGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFIT   95 (318)
T ss_dssp             SSSEEECCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred             cchhhhhhhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEec
Confidence            34567888899999999999999999999984  7889999998765444444556666677889999999999999999


Q ss_pred             CCCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCcEEeCCCCcEEEEecCccee
Q 008656          361 PPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQN-NIIHRDLKAANLLMDENEVVKVADFGVARV  439 (558)
Q Consensus       361 ~~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~-gIiHrDLKp~NILl~~~~~vkL~DFG~a~~  439 (558)
                      ++..|+||||+ ++.+..+.....+.+++..++.++.||+.||.|||++ ||+||||||+||+++.++.+||+|||++..
T Consensus        96 ~~~~~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~  174 (318)
T 2dyl_A           96 NTDVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGR  174 (318)
T ss_dssp             SSEEEEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC--
T ss_pred             CCcEEEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchh
Confidence            99999999999 6677777766567899999999999999999999995 999999999999999999999999999976


Q ss_pred             cccCCccccCCCCCCccchhhhc-----CCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCC--C
Q 008656          440 KAQSGVMTAETGTYRWMAPEVIE-----HKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIP--K  512 (558)
Q Consensus       440 ~~~~~~~~~~~gt~~y~APEv~~-----~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip--~  512 (558)
                      ...........||+.|+|||++.     +..++.++||||||+++|+|++|..||..................+.++  .
T Consensus       175 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  254 (318)
T 2dyl_A          175 LVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHM  254 (318)
T ss_dssp             ------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSS
T ss_pred             ccCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCccC
Confidence            65554455667999999999994     5678999999999999999999999998754433333333334444444  3


Q ss_pred             CCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          513 NSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       513 ~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                      .+++.+.+||.+||..||.+||++.++++
T Consensus       255 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          255 GFSGDFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             CCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             CCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            57999999999999999999999999985


No 202
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00  E-value=1.5e-42  Score=351.40  Aligned_cols=250  Identities=22%  Similarity=0.398  Sum_probs=209.3

Q ss_pred             CCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeEE
Q 008656          291 PKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVT  368 (558)
Q Consensus       291 ~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV~  368 (558)
                      .++|++.+.||+|+||.||+|++.  ++.||||+++...........+.+|+.++++++||||+++++++..++..|+||
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (299)
T 2r3i_A            2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF   81 (299)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEE
Confidence            368999999999999999999984  788999999865444444567889999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccC-Ccc
Q 008656          369 EFMSGGSVYDYLHKLK-GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQS-GVM  446 (558)
Q Consensus       369 E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~-~~~  446 (558)
                      ||+. ++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++...... ...
T Consensus        82 e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~  160 (299)
T 2r3i_A           82 EFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY  160 (299)
T ss_dssp             ECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCT
T ss_pred             Eccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCcccc
Confidence            9996 69999997643 56899999999999999999999999999999999999999999999999999765433 233


Q ss_pred             ccCCCCCCccchhhhcCCC-CCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCC----------------CCC
Q 008656          447 TAETGTYRWMAPEVIEHKP-YDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGL----------------RPT  509 (558)
Q Consensus       447 ~~~~gt~~y~APEv~~~~~-~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~----------------r~~  509 (558)
                      ....||+.|+|||++.+.. ++.++||||||+++|+|++|..||...+..+....+.....                .+.
T Consensus       161 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (299)
T 2r3i_A          161 THEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS  240 (299)
T ss_dssp             TSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTT
T ss_pred             CcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcccchh
Confidence            4557899999999998765 89999999999999999999999999887766655543211                111


Q ss_pred             CC-----------CCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          510 IP-----------KNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       510 ip-----------~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                      ++           ..+++++.+||.+||+.||.+|||+.++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~  283 (299)
T 2r3i_A          241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA  283 (299)
T ss_dssp             SCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            11           246789999999999999999999999875


No 203
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00  E-value=6.7e-43  Score=395.72  Aligned_cols=253  Identities=23%  Similarity=0.388  Sum_probs=219.4

Q ss_pred             ceeeCCCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCC-ChHHHHHHHHHHHHHHhc-cCCCceEEEeeecCC
Q 008656          286 VWEIDPKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERI-NSDMQKEFAQEVFIMRKV-RHKNVVQFIGACTKP  361 (558)
Q Consensus       286 ~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~-~~~~~~~~~~Ev~iL~~l-~HpnIv~l~g~~~~~  361 (558)
                      ...+..++|++.+.||+|+||.||++++.  ++.||||+++.... .......+..|..++..+ +||+|+++++++...
T Consensus       335 ~~~~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~  414 (674)
T 3pfq_A          335 RDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM  414 (674)
T ss_dssp             -----CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCS
T ss_pred             cccccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeC
Confidence            34566789999999999999999999985  56799999985421 122346678899999987 699999999999999


Q ss_pred             CCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecc
Q 008656          362 PSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKA  441 (558)
Q Consensus       362 ~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~  441 (558)
                      ..+||||||++||+|.+++.. .+.+++..++.++.||+.||+|||++||+||||||+||||+.+|.+||+|||+++...
T Consensus       415 ~~~~lV~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~  493 (674)
T 3pfq_A          415 DRLYFVMEYVNGGDLMYHIQQ-VGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI  493 (674)
T ss_dssp             SEEEEEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred             CEEEEEEeCcCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence            999999999999999999987 4679999999999999999999999999999999999999999999999999998643


Q ss_pred             c-CCccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHH
Q 008656          442 Q-SGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAE  520 (558)
Q Consensus       442 ~-~~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~~  520 (558)
                      . ........||+.|+|||++.+..|+.++|||||||+||||++|..||.+.+..+....+....  ..+|..+++++.+
T Consensus       494 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~--~~~p~~~s~~~~~  571 (674)
T 3pfq_A          494 WDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN--VAYPKSMSKEAVA  571 (674)
T ss_dssp             CTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSC--CCCCTTSCHHHHH
T ss_pred             cCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC--CCCCccCCHHHHH
Confidence            3 334556789999999999999999999999999999999999999999998888777776543  4678899999999


Q ss_pred             HHHHhhhcCCCCCCCH-----HHHHH
Q 008656          521 LLERCWQQDPALRPDF-----SEIIE  541 (558)
Q Consensus       521 Ll~~cL~~dP~~RPs~-----~ell~  541 (558)
                      ||.+||+.||.+||++     .+|++
T Consensus       572 li~~lL~~dP~~R~~~~~~~~~ei~~  597 (674)
T 3pfq_A          572 ICKGLMTKHPGKRLGCGPEGERDIKE  597 (674)
T ss_dssp             HHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred             HHHHHccCCHHHCCCCCCCcHHHHhc
Confidence            9999999999999987     66653


No 204
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00  E-value=3.6e-43  Score=389.66  Aligned_cols=251  Identities=24%  Similarity=0.389  Sum_probs=217.1

Q ss_pred             eCCCceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCce
Q 008656          289 IDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERIN-SDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLC  365 (558)
Q Consensus       289 i~~~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~-~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~  365 (558)
                      +..++|++.+.||+|+||.||++++  +++.||||+++..... ......+.+|+.+|++++||||+++++++.....+|
T Consensus       181 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~  260 (576)
T 2acx_A          181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALC  260 (576)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             ccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEE
Confidence            4456899999999999999999998  4788999999754221 123456889999999999999999999999999999


Q ss_pred             eEEEecCCCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccCC
Q 008656          366 IVTEFMSGGSVYDYLHKLK-GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSG  444 (558)
Q Consensus       366 lV~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~  444 (558)
                      +||||++||+|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++......
T Consensus       261 lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~  340 (576)
T 2acx_A          261 LVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ  340 (576)
T ss_dssp             EEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred             EEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceecccCc
Confidence            9999999999999997643 349999999999999999999999999999999999999999999999999998776655


Q ss_pred             ccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCC----HHHHHHHHHhcCCCCCCCCCCcHHHHH
Q 008656          445 VMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLT----PLQAAVGVVQKGLRPTIPKNSQPKLAE  520 (558)
Q Consensus       445 ~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~----~~~~~~~v~~~~~r~~ip~~~~~~l~~  520 (558)
                      ......||+.|+|||++.+..|+.++|||||||++|||++|..||...+    .......+.  .....++..+++++.+
T Consensus       341 ~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~--~~~~~~p~~~s~~~~d  418 (576)
T 2acx_A          341 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK--EVPEEYSERFSPQARS  418 (576)
T ss_dssp             CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHH--HCCCCCCTTSCHHHHH
T ss_pred             cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhh--cccccCCccCCHHHHH
Confidence            5566789999999999999999999999999999999999999998753    222222222  2345677889999999


Q ss_pred             HHHHhhhcCCCCCC-----CHHHHHH
Q 008656          521 LLERCWQQDPALRP-----DFSEIIE  541 (558)
Q Consensus       521 Ll~~cL~~dP~~RP-----s~~ell~  541 (558)
                      ||.+||+.||.+||     ++.|+++
T Consensus       419 LI~~lL~~dP~~R~g~~~~sa~eil~  444 (576)
T 2acx_A          419 LCSQLLCKDPAERLGCRGGSAREVKE  444 (576)
T ss_dssp             HHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred             HHHHhccCCHHHcCCCCCCCHHHHHh
Confidence            99999999999999     7888874


No 205
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00  E-value=9.2e-43  Score=348.45  Aligned_cols=248  Identities=26%  Similarity=0.437  Sum_probs=210.7

Q ss_pred             CceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeEEE
Q 008656          292 KHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTE  369 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV~E  369 (558)
                      ++|++.+.||+|+||.||++.+.  ++.||||+++..... .....+.+|+.+++.++||||+++++++...+..|+|||
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCT-THHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccch-hhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence            47899999999999999999984  788999999765432 345788999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccC---Ccc
Q 008656          370 FMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQS---GVM  446 (558)
Q Consensus       370 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~---~~~  446 (558)
                      |++|++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++......   ...
T Consensus        86 ~~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~  164 (276)
T 2yex_A           86 YCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL  164 (276)
T ss_dssp             CCTTEEGGGGSBT-TTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCB
T ss_pred             ecCCCcHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcc
Confidence            9999999999865 457899999999999999999999999999999999999999999999999999765432   233


Q ss_pred             ccCCCCCCccchhhhcCCCC-CchHHHHHHHHHHHHHHcCCCCCCCCCHHHH-HHHHHhcCCCCCCCCCCcHHHHHHHHH
Q 008656          447 TAETGTYRWMAPEVIEHKPY-DHKADVFSFGIVLWELLTGKLPYEYLTPLQA-AVGVVQKGLRPTIPKNSQPKLAELLER  524 (558)
Q Consensus       447 ~~~~gt~~y~APEv~~~~~~-s~ksDVwSlGilL~elltG~~Pf~~~~~~~~-~~~v~~~~~r~~ip~~~~~~l~~Ll~~  524 (558)
                      ....||+.|+|||++.+..+ +.++||||||+++|+|++|..||........ ................+++.+.+||.+
T Consensus       165 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  244 (276)
T 2yex_A          165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK  244 (276)
T ss_dssp             CCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHH
T ss_pred             cCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHHHHH
Confidence            45678999999999988775 7899999999999999999999987654322 222222222222335688999999999


Q ss_pred             hhhcCCCCCCCHHHHHH
Q 008656          525 CWQQDPALRPDFSEIIE  541 (558)
Q Consensus       525 cL~~dP~~RPs~~ell~  541 (558)
                      ||..||.+|||+.++++
T Consensus       245 ~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          245 ILVENPSARITIPDIKK  261 (276)
T ss_dssp             HSCSSTTTSCCHHHHTT
T ss_pred             HCCCCchhCCCHHHHhc
Confidence            99999999999999875


No 206
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00  E-value=2e-43  Score=357.51  Aligned_cols=255  Identities=33%  Similarity=0.572  Sum_probs=196.9

Q ss_pred             ceeeCCCceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCC
Q 008656          286 VWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS  363 (558)
Q Consensus       286 ~~~i~~~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~  363 (558)
                      .|.+..++|++.+.||+|+||.||++.+  +++.||||++..... ......+.+|+.++++++||||+++++++...+.
T Consensus         9 p~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   87 (303)
T 2vwi_A            9 PWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC-QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDE   87 (303)
T ss_dssp             ----CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEESSSC
T ss_pred             ccccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc-chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCC
Confidence            4678889999999999999999999986  578899999875532 2335678899999999999999999999999999


Q ss_pred             ceeEEEecCCCCHHHHHHhh-------ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCc
Q 008656          364 LCIVTEFMSGGSVYDYLHKL-------KGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGV  436 (558)
Q Consensus       364 ~~lV~E~~~ggsL~~~l~~~-------~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~  436 (558)
                      .++||||++|++|.+++...       .+.+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+
T Consensus        88 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~  167 (303)
T 2vwi_A           88 LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGV  167 (303)
T ss_dssp             EEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHH
T ss_pred             cEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccc
Confidence            99999999999999999742       35689999999999999999999999999999999999999999999999999


Q ss_pred             ceecccCC------ccccCCCCCCccchhhhcC-CCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCC--
Q 008656          437 ARVKAQSG------VMTAETGTYRWMAPEVIEH-KPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLR--  507 (558)
Q Consensus       437 a~~~~~~~------~~~~~~gt~~y~APEv~~~-~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r--  507 (558)
                      +.......      ......||+.|+|||++.+ ..++.++||||||+++|+|++|..||..................  
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  247 (303)
T 2vwi_A          168 SAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL  247 (303)
T ss_dssp             HHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCT
T ss_pred             hheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCcc
Confidence            87543321      2234578999999999976 57899999999999999999999999987776655444432211  


Q ss_pred             ------CCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          508 ------PTIPKNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       508 ------~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                            +.....+++.+.+||.+||+.||.+||++.++++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          248 ETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             TC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             ccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence                  1234567899999999999999999999999986


No 207
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.2e-43  Score=371.10  Aligned_cols=252  Identities=23%  Similarity=0.395  Sum_probs=210.7

Q ss_pred             eeCCCceeeeeeeeecCceEEEEEEE-----CCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhc-cCCCceEEEeeec
Q 008656          288 EIDPKHLKFGSKVASGSYGDLYRGTY-----CSQDVAIKVLKPERI--NSDMQKEFAQEVFIMRKV-RHKNVVQFIGACT  359 (558)
Q Consensus       288 ~i~~~~~~i~~~LG~GsfG~Vy~g~~-----~~~~VAIKvlk~~~~--~~~~~~~~~~Ev~iL~~l-~HpnIv~l~g~~~  359 (558)
                      .+..++|++.++||+|+||.||+++.     .++.||||+++....  .......+.+|+.+++++ +||||+++++++.
T Consensus        50 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~  129 (355)
T 1vzo_A           50 KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ  129 (355)
T ss_dssp             CCCGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEE
T ss_pred             cccccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEe
Confidence            45567999999999999999999998     578899999875432  112234577899999999 5999999999999


Q ss_pred             CCCCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCccee
Q 008656          360 KPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARV  439 (558)
Q Consensus       360 ~~~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~  439 (558)
                      ....+|+||||++|++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus       130 ~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~  208 (355)
T 1vzo_A          130 TETKLHLILDYINGGELFTHLSQ-RERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKE  208 (355)
T ss_dssp             ETTEEEEEECCCCSCBHHHHHHH-HSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred             eCceEEEEeecCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence            99999999999999999999976 46799999999999999999999999999999999999999999999999999986


Q ss_pred             cccC--CccccCCCCCCccchhhhcC--CCCCchHHHHHHHHHHHHHHcCCCCCCCCC----HHHHHHHHHhcCCCCCCC
Q 008656          440 KAQS--GVMTAETGTYRWMAPEVIEH--KPYDHKADVFSFGIVLWELLTGKLPYEYLT----PLQAAVGVVQKGLRPTIP  511 (558)
Q Consensus       440 ~~~~--~~~~~~~gt~~y~APEv~~~--~~~s~ksDVwSlGilL~elltG~~Pf~~~~----~~~~~~~v~~~~~r~~ip  511 (558)
                      ....  .......||+.|+|||++.+  ..++.++|||||||++|+|++|..||....    .......+.  ...+.++
T Consensus       209 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~  286 (355)
T 1vzo_A          209 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRIL--KSEPPYP  286 (355)
T ss_dssp             CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHH--HCCCCCC
T ss_pred             cccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHh--ccCCCCC
Confidence            5332  22334579999999999986  458899999999999999999999997432    222222222  2345678


Q ss_pred             CCCcHHHHHHHHHhhhcCCCCCC-----CHHHHHHH
Q 008656          512 KNSQPKLAELLERCWQQDPALRP-----DFSEIIEI  542 (558)
Q Consensus       512 ~~~~~~l~~Ll~~cL~~dP~~RP-----s~~ell~~  542 (558)
                      ..+++.+.+||.+||..||.+||     ++.++++.
T Consensus       287 ~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h  322 (355)
T 1vzo_A          287 QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH  322 (355)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred             cccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence            88999999999999999999999     89998753


No 208
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00  E-value=5.1e-43  Score=360.37  Aligned_cols=257  Identities=30%  Similarity=0.509  Sum_probs=191.6

Q ss_pred             CCCceeeCCCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHH-HHHhccCCCceEEEeeec
Q 008656          283 GTDVWEIDPKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVF-IMRKVRHKNVVQFIGACT  359 (558)
Q Consensus       283 ~~~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~-iL~~l~HpnIv~l~g~~~  359 (558)
                      ....|.+..++|++.+.||+|+||.||++.+.  ++.||||+++... .......+..|+. +++.++||||+++++++.
T Consensus        13 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~   91 (327)
T 3aln_A           13 PEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV-DEKEQKQLLMDLDVVMRSSDCPYIVQFYGALF   91 (327)
T ss_dssp             CCEEECCCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCC-CHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEE
T ss_pred             hHHhcccCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeeccc-CchHHHHHHHHHHHHHHcCCCCcEeeeeeEEE
Confidence            34678899999999999999999999999985  7889999998653 3333455556665 788889999999999999


Q ss_pred             CCCCceeEEEecCCCCHHHHHHh----hccCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCcEEeCCCCcEEEEec
Q 008656          360 KPPSLCIVTEFMSGGSVYDYLHK----LKGVFKLPSLLKVAIDVSKGMNYLHQN-NIIHRDLKAANLLMDENEVVKVADF  434 (558)
Q Consensus       360 ~~~~~~lV~E~~~ggsL~~~l~~----~~~~l~~~~~~~i~~qI~~aL~yLH~~-gIiHrDLKp~NILl~~~~~vkL~DF  434 (558)
                      .++..++||||+.| +|.+++..    ....+++..++.++.|++.||.|||++ ||+||||||+|||++.++.+||+||
T Consensus        92 ~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Df  170 (327)
T 3aln_A           92 REGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDF  170 (327)
T ss_dssp             CSSEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCC
T ss_pred             eCCceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccC
Confidence            99999999999965 88888753    246789999999999999999999999 9999999999999999999999999


Q ss_pred             CcceecccCCccccCCCCCCccchhhh----cCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCC
Q 008656          435 GVARVKAQSGVMTAETGTYRWMAPEVI----EHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTI  510 (558)
Q Consensus       435 G~a~~~~~~~~~~~~~gt~~y~APEv~----~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~i  510 (558)
                      |+++............||+.|+|||++    .+..++.++||||||+++|+|++|..||...............+..+.+
T Consensus       171 g~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~  250 (327)
T 3aln_A          171 GISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQL  250 (327)
T ss_dssp             SSSCC------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCC
T ss_pred             CCceecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCC
Confidence            999876555444555799999999999    5677999999999999999999999999876543222222222222223


Q ss_pred             C----CCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          511 P----KNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       511 p----~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                      +    ..+++.+.+||.+||..||.+||++.++++
T Consensus       251 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          251 SNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             CCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence            2    468899999999999999999999999975


No 209
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00  E-value=1.8e-42  Score=349.75  Aligned_cols=254  Identities=28%  Similarity=0.491  Sum_probs=212.3

Q ss_pred             ceeeCCCceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCC
Q 008656          286 VWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS  363 (558)
Q Consensus       286 ~~~i~~~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~  363 (558)
                      .+.+..+++.....||+|+||.||+|.+  +++.||||+++...  ......+.+|+.+++.++||||+++++++...+.
T Consensus        16 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~   93 (295)
T 2clq_A           16 EYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD--SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGF   93 (295)
T ss_dssp             CEEECBCTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC--C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTE
T ss_pred             cccccccCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc--hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCc
Confidence            3455555666667999999999999998  46789999987653  3345779999999999999999999999999999


Q ss_pred             ceeEEEecCCCCHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCC-CCcEEEEecCcceec
Q 008656          364 LCIVTEFMSGGSVYDYLHKLKG--VFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDE-NEVVKVADFGVARVK  440 (558)
Q Consensus       364 ~~lV~E~~~ggsL~~~l~~~~~--~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~-~~~vkL~DFG~a~~~  440 (558)
                      .++||||++|++|.+++....+  .+++..++.++.||+.||.|||++||+||||||+||+++. ++.+||+|||+++..
T Consensus        94 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~  173 (295)
T 2clq_A           94 IKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRL  173 (295)
T ss_dssp             EEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEES
T ss_pred             EEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeeccccccc
Confidence            9999999999999999986533  4568889999999999999999999999999999999987 899999999999765


Q ss_pred             ccCC-ccccCCCCCCccchhhhcCCC--CCchHHHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHhcCCCCCCCCCCcH
Q 008656          441 AQSG-VMTAETGTYRWMAPEVIEHKP--YDHKADVFSFGIVLWELLTGKLPYEYLTPLQ-AAVGVVQKGLRPTIPKNSQP  516 (558)
Q Consensus       441 ~~~~-~~~~~~gt~~y~APEv~~~~~--~s~ksDVwSlGilL~elltG~~Pf~~~~~~~-~~~~v~~~~~r~~ip~~~~~  516 (558)
                      .... ......||+.|+|||++.+..  ++.++||||||+++|+|++|..||....... ...........+.++..+++
T Consensus       174 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (295)
T 2clq_A          174 AGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSA  253 (295)
T ss_dssp             CC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCH
T ss_pred             CCCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCH
Confidence            4432 234557899999999997654  8999999999999999999999997654333 23333344566778889999


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          517 KLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       517 ~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                      ++.+||.+||..||.+||++.++++
T Consensus       254 ~~~~li~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          254 EAKAFILKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             HHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHccCChhhCCCHHHHhc
Confidence            9999999999999999999999874


No 210
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00  E-value=1.6e-42  Score=355.49  Aligned_cols=250  Identities=23%  Similarity=0.397  Sum_probs=211.1

Q ss_pred             CCceeeeeeeeecCceEEEEEEEC---CceEEEEEecCCCCChHHHHHHHHHHHHHHhc---cCCCceEEEeeec-----
Q 008656          291 PKHLKFGSKVASGSYGDLYRGTYC---SQDVAIKVLKPERINSDMQKEFAQEVFIMRKV---RHKNVVQFIGACT-----  359 (558)
Q Consensus       291 ~~~~~i~~~LG~GsfG~Vy~g~~~---~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l---~HpnIv~l~g~~~-----  359 (558)
                      .++|++.+.||+|+||.||++++.   ++.||+|+++...........+.+|+.+++.+   +||||+++++++.     
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~   89 (326)
T 1blx_A           10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   89 (326)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             hhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccC
Confidence            368999999999999999999983   57899999875543332234566788777776   8999999999986     


Q ss_pred             CCCCceeEEEecCCCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcce
Q 008656          360 KPPSLCIVTEFMSGGSVYDYLHKLK-GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR  438 (558)
Q Consensus       360 ~~~~~~lV~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~  438 (558)
                      ....+++||||+. ++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+++
T Consensus        90 ~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~  168 (326)
T 1blx_A           90 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR  168 (326)
T ss_dssp             SEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred             CCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCcccc
Confidence            5667899999996 69999997643 348999999999999999999999999999999999999999999999999998


Q ss_pred             ecccCCccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCC-----------
Q 008656          439 VKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLR-----------  507 (558)
Q Consensus       439 ~~~~~~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r-----------  507 (558)
                      ............||..|+|||++.+..++.++||||||+++|+|++|..||...+.......+......           
T Consensus       169 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  248 (326)
T 1blx_A          169 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA  248 (326)
T ss_dssp             CCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCS
T ss_pred             cccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccc
Confidence            766555556678999999999999999999999999999999999999999988877665555431100           


Q ss_pred             --------------CCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          508 --------------PTIPKNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       508 --------------~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                                    ..++..+++.+.+||.+||..||.+||++.++++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  296 (326)
T 1blx_A          249 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  296 (326)
T ss_dssp             SCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             cchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence                          1133567899999999999999999999999984


No 211
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00  E-value=4.3e-42  Score=351.28  Aligned_cols=254  Identities=21%  Similarity=0.375  Sum_probs=215.8

Q ss_pred             CceeeCCCceeeeeeeeecCceEEEEEEEC-CceEEEEEecCCCCChHHHHHHHHHHHHHHhcc--CCCceEEEeeecCC
Q 008656          285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYC-SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVR--HKNVVQFIGACTKP  361 (558)
Q Consensus       285 ~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~-~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~--HpnIv~l~g~~~~~  361 (558)
                      ....+..++|++.+.||+|+||.||++.+. ++.||||++............+.+|+.++++++  |+||+++++++...
T Consensus        21 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~  100 (313)
T 3cek_A           21 QSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD  100 (313)
T ss_dssp             CEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECS
T ss_pred             eeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecC
Confidence            456788889999999999999999999874 677999999877666677788999999999997  49999999999999


Q ss_pred             CCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecc
Q 008656          362 PSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKA  441 (558)
Q Consensus       362 ~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~  441 (558)
                      ..+|+|||+ .+++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||+++...
T Consensus       101 ~~~~lv~e~-~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~  177 (313)
T 3cek_A          101 QYIYMVMEC-GNIDLNSWLKK-KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ  177 (313)
T ss_dssp             SEEEEEECC-CSEEHHHHHHH-CSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCC--
T ss_pred             CEEEEEEec-CCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE-CCeEEEeecccccccc
Confidence            999999994 58899999986 56789999999999999999999999999999999999996 5899999999997654


Q ss_pred             cCC---ccccCCCCCCccchhhhcC-----------CCCCchHHHHHHHHHHHHHHcCCCCCCCCC-HHHHHHHHHhcCC
Q 008656          442 QSG---VMTAETGTYRWMAPEVIEH-----------KPYDHKADVFSFGIVLWELLTGKLPYEYLT-PLQAAVGVVQKGL  506 (558)
Q Consensus       442 ~~~---~~~~~~gt~~y~APEv~~~-----------~~~s~ksDVwSlGilL~elltG~~Pf~~~~-~~~~~~~v~~~~~  506 (558)
                      ...   ......||+.|+|||++.+           ..++.++||||||+++|+|++|..||.... .......+.....
T Consensus       178 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  257 (313)
T 3cek_A          178 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNH  257 (313)
T ss_dssp             ------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTS
T ss_pred             CccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhccc
Confidence            332   2234578999999999976           578999999999999999999999998764 3444455555566


Q ss_pred             CCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          507 RPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       507 r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                      ...++..+++.+.++|.+||..||.+||++.++++
T Consensus       258 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  292 (313)
T 3cek_A          258 EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  292 (313)
T ss_dssp             CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccCCcccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence            66778888999999999999999999999999985


No 212
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00  E-value=7.8e-43  Score=360.67  Aligned_cols=237  Identities=22%  Similarity=0.426  Sum_probs=182.3

Q ss_pred             eeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhcc-CCCceEEEeeecCCCCceeEEEecCCC
Q 008656          298 SKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVR-HKNVVQFIGACTKPPSLCIVTEFMSGG  374 (558)
Q Consensus       298 ~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~-HpnIv~l~g~~~~~~~~~lV~E~~~gg  374 (558)
                      ++||+|+||.||++.+.  ++.||||++...     ....+.+|+.+++.+. ||||+++++++......|+||||++|+
T Consensus        17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~   91 (325)
T 3kn6_A           17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR-----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGG   91 (325)
T ss_dssp             CCSEEETTEEEEEEEETTTCCEEEEEEEEGG-----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEChh-----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCC
Confidence            68999999999999985  788999998743     3467788999999997 999999999999999999999999999


Q ss_pred             CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCC---cEEEEecCcceecccC-CccccCC
Q 008656          375 SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENE---VVKVADFGVARVKAQS-GVMTAET  450 (558)
Q Consensus       375 sL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~---~vkL~DFG~a~~~~~~-~~~~~~~  450 (558)
                      +|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++   .+||+|||+++..... .......
T Consensus        92 ~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  170 (325)
T 3kn6_A           92 ELFERIKK-KKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC  170 (325)
T ss_dssp             BHHHHHHH-CSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC---------
T ss_pred             cHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccC
Confidence            99999987 56799999999999999999999999999999999999998765   8999999999865443 3345667


Q ss_pred             CCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCH-------HHHHHHHHhcCCCCC--CCCCCcHHHHHH
Q 008656          451 GTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTP-------LQAAVGVVQKGLRPT--IPKNSQPKLAEL  521 (558)
Q Consensus       451 gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~-------~~~~~~v~~~~~r~~--ip~~~~~~l~~L  521 (558)
                      ||+.|+|||++.+..|+.++||||||+++|+|++|..||.....       .+....+........  ....+++++.+|
T Consensus       171 ~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l  250 (325)
T 3kn6_A          171 FTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDL  250 (325)
T ss_dssp             -------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHH
T ss_pred             CCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHH
Confidence            89999999999999999999999999999999999999976443       222222222211111  113578999999


Q ss_pred             HHHhhhcCCCCCCCHHHHH
Q 008656          522 LERCWQQDPALRPDFSEII  540 (558)
Q Consensus       522 l~~cL~~dP~~RPs~~ell  540 (558)
                      |.+||..||.+||++.+++
T Consensus       251 i~~~L~~dP~~Rpt~~ell  269 (325)
T 3kn6_A          251 IQGLLTVDPNKRLKMSGLR  269 (325)
T ss_dssp             HHHHHCCCTTTCCCTTTST
T ss_pred             HHHHCCCChhHCCCHHHHh
Confidence            9999999999999999876


No 213
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00  E-value=8.2e-43  Score=358.39  Aligned_cols=248  Identities=24%  Similarity=0.410  Sum_probs=204.3

Q ss_pred             CceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCC------hHHHHHHHHHHHHHHhccCCCceEEEeeecCCCC
Q 008656          292 KHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERIN------SDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS  363 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~------~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~  363 (558)
                      ++|++.+.||+|+||.||+|.+.  ++.||||++......      ......+.+|+.++++++||||+++++++..+. 
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   88 (322)
T 2ycf_A           10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-   88 (322)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-
T ss_pred             hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-
Confidence            57999999999999999999984  678999999765321      122345889999999999999999999987654 


Q ss_pred             ceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCc---EEEEecCcceec
Q 008656          364 LCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV---VKVADFGVARVK  440 (558)
Q Consensus       364 ~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~---vkL~DFG~a~~~  440 (558)
                      .|+||||++|++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.   +||+|||+++..
T Consensus        89 ~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~  167 (322)
T 2ycf_A           89 YYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL  167 (322)
T ss_dssp             EEEEEECCTTEETHHHHST-TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEEC
T ss_pred             eEEEEecCCCCcHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceec
Confidence            8999999999999999975 567999999999999999999999999999999999999987664   999999999876


Q ss_pred             ccCCccccCCCCCCccchhhhc---CCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCC---CCCCCC
Q 008656          441 AQSGVMTAETGTYRWMAPEVIE---HKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRP---TIPKNS  514 (558)
Q Consensus       441 ~~~~~~~~~~gt~~y~APEv~~---~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~---~ip~~~  514 (558)
                      ..........||+.|+|||++.   ...++.++|||||||++|+|++|..||............+..+...   ..+..+
T Consensus       168 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (322)
T 2ycf_A          168 GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV  247 (322)
T ss_dssp             CCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTTS
T ss_pred             ccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhhhhc
Confidence            6554445567999999999973   5779999999999999999999999997654332222223223222   223568


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          515 QPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       515 ~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                      ++.+.+||.+||..||.+||++.++++
T Consensus       248 ~~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          248 SEKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence            899999999999999999999999984


No 214
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00  E-value=1e-42  Score=355.60  Aligned_cols=246  Identities=25%  Similarity=0.432  Sum_probs=200.8

Q ss_pred             Cceeee-eeeeecCceEEEEEEE--CCceEEEEEecCCCCChHHHHHHHHHHHHHHhc-cCCCceEEEeeecCCCCceeE
Q 008656          292 KHLKFG-SKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKV-RHKNVVQFIGACTKPPSLCIV  367 (558)
Q Consensus       292 ~~~~i~-~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l-~HpnIv~l~g~~~~~~~~~lV  367 (558)
                      +.|++. +.||+|+||.||++++  .++.||||+++...  ......+.+|+.+++++ +||||+++++++..++.+|+|
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv   89 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP--GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLV   89 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS--SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc--chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEE
Confidence            567774 7899999999999986  57889999997653  23356788999999985 799999999999999999999


Q ss_pred             EEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCc---EEEEecCcceecccCC
Q 008656          368 TEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV---VKVADFGVARVKAQSG  444 (558)
Q Consensus       368 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~---vkL~DFG~a~~~~~~~  444 (558)
                      |||++|++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++.   +||+|||+++......
T Consensus        90 ~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~  168 (316)
T 2ac3_A           90 FEKMRGGSILSHIHK-RRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNG  168 (316)
T ss_dssp             EECCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC------
T ss_pred             EEcCCCCcHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCC
Confidence            999999999999977 467999999999999999999999999999999999999998765   9999999987543221


Q ss_pred             --------ccccCCCCCCccchhhhcC-----CCCCchHHHHHHHHHHHHHHcCCCCCCCCCH--------------HHH
Q 008656          445 --------VMTAETGTYRWMAPEVIEH-----KPYDHKADVFSFGIVLWELLTGKLPYEYLTP--------------LQA  497 (558)
Q Consensus       445 --------~~~~~~gt~~y~APEv~~~-----~~~s~ksDVwSlGilL~elltG~~Pf~~~~~--------------~~~  497 (558)
                              ......||+.|+|||++.+     ..++.++|||||||++|+|++|..||.....              ...
T Consensus       169 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  248 (316)
T 2ac3_A          169 DCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNM  248 (316)
T ss_dssp             -------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHH
T ss_pred             ccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHH
Confidence                    1234469999999999975     5688999999999999999999999976542              111


Q ss_pred             HHHHHhcCCCCCCC----CCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          498 AVGVVQKGLRPTIP----KNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       498 ~~~v~~~~~r~~ip----~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                      ....+..+. ..++    ..+++.+.+||.+||..||.+|||+.|+++
T Consensus       249 ~~~~i~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  295 (316)
T 2ac3_A          249 LFESIQEGK-YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ  295 (316)
T ss_dssp             HHHHHHHCC-CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHHhccC-cccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence            222222222 2233    467899999999999999999999999986


No 215
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00  E-value=1.3e-42  Score=383.52  Aligned_cols=250  Identities=25%  Similarity=0.404  Sum_probs=214.6

Q ss_pred             eCCCceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCce
Q 008656          289 IDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERIN-SDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLC  365 (558)
Q Consensus       289 i~~~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~-~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~  365 (558)
                      +..++|++.+.||+|+||.||++++  +++.||||+++..... ......+.+|+.++++++||||+++++++.....+|
T Consensus       182 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~  261 (543)
T 3c4z_A          182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLC  261 (543)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             CChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEE
Confidence            3456899999999999999999998  4788999999754321 123467889999999999999999999999999999


Q ss_pred             eEEEecCCCCHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceeccc
Q 008656          366 IVTEFMSGGSVYDYLHKLK---GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQ  442 (558)
Q Consensus       366 lV~E~~~ggsL~~~l~~~~---~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~  442 (558)
                      +||||++||+|.+++....   ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++....
T Consensus       262 lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~  341 (543)
T 3c4z_A          262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA  341 (543)
T ss_dssp             EEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             EEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence            9999999999999997642   4699999999999999999999999999999999999999999999999999987654


Q ss_pred             CCc-cccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCC----HHHHHHHHHhcCCCCCCCCCCcHH
Q 008656          443 SGV-MTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLT----PLQAAVGVVQKGLRPTIPKNSQPK  517 (558)
Q Consensus       443 ~~~-~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~----~~~~~~~v~~~~~r~~ip~~~~~~  517 (558)
                      ... .....||+.|+|||++.+..|+.++|||||||++|||++|..||...+    ..+....+...  ...+|..+++.
T Consensus       342 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~--~~~~p~~~s~~  419 (543)
T 3c4z_A          342 GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ--AVTYPDKFSPA  419 (543)
T ss_dssp             TCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHC--CCCCCTTSCHH
T ss_pred             CCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhc--ccCCCcccCHH
Confidence            433 334589999999999999999999999999999999999999998653    33444444433  34577889999


Q ss_pred             HHHHHHHhhhcCCCCCCCH-----HHHH
Q 008656          518 LAELLERCWQQDPALRPDF-----SEII  540 (558)
Q Consensus       518 l~~Ll~~cL~~dP~~RPs~-----~ell  540 (558)
                      +.+||.+||+.||.+||++     .+++
T Consensus       420 ~~~li~~lL~~dP~~R~~~~~~~a~ei~  447 (543)
T 3c4z_A          420 SKDFCEALLQKDPEKRLGFRDGSCDGLR  447 (543)
T ss_dssp             HHHHHHHHSCSSGGGSCCCBTTBSHHHH
T ss_pred             HHHHHHHhccCCHhHCCCCcccCHHHHH
Confidence            9999999999999999975     5665


No 216
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=3.2e-45  Score=370.75  Aligned_cols=251  Identities=29%  Similarity=0.603  Sum_probs=196.2

Q ss_pred             CceeeeeeeeecCceEEEEEEECCceEEEEEecCCCCChHHHHHHHHHHHHHHh--ccCCCceEEEeeecCCC----Cce
Q 008656          292 KHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRK--VRHKNVVQFIGACTKPP----SLC  365 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~--l~HpnIv~l~g~~~~~~----~~~  365 (558)
                      ++|++.++||+|+||.||+|++.++.||||+++..     ....+.+|..++..  ++||||+++++++....    .++
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   77 (303)
T 3gxj_A            3 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW   77 (303)
T ss_dssp             GGCCCCEEEEECSSSEEEEC-CTTSCEEEEECC-T-----THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred             ceeeehhhccCCCCeEEEEEEEcCcceEEEEeccc-----chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence            57889999999999999999999999999998743     23567778888877  78999999999987665    689


Q ss_pred             eEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH--------HCCceeccCCCCcEEeCCCCcEEEEecCcc
Q 008656          366 IVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH--------QNNIIHRDLKAANLLMDENEVVKVADFGVA  437 (558)
Q Consensus       366 lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH--------~~gIiHrDLKp~NILl~~~~~vkL~DFG~a  437 (558)
                      +||||+++|+|.+++..  ..+++..++.++.|++.||.|||        ++||+||||||+|||++.++.+||+|||++
T Consensus        78 lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a  155 (303)
T 3gxj_A           78 LVSDYHEHGSLFDYLNR--YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA  155 (303)
T ss_dssp             EEEECCTTCCHHHHHHH--CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-
T ss_pred             EEEeccCCCCHHHHHhc--cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcc
Confidence            99999999999999965  56888999999999999999999        999999999999999999999999999999


Q ss_pred             eecccCCcc-----ccCCCCCCccchhhhcCC------CCCchHHHHHHHHHHHHHHcC----------CCCCCCCCH--
Q 008656          438 RVKAQSGVM-----TAETGTYRWMAPEVIEHK------PYDHKADVFSFGIVLWELLTG----------KLPYEYLTP--  494 (558)
Q Consensus       438 ~~~~~~~~~-----~~~~gt~~y~APEv~~~~------~~s~ksDVwSlGilL~elltG----------~~Pf~~~~~--  494 (558)
                      +........     ....||+.|+|||++.+.      .++.++||||||+++|||++|          ..||....+  
T Consensus       156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~  235 (303)
T 3gxj_A          156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD  235 (303)
T ss_dssp             CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-C
T ss_pred             eeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCC
Confidence            765443322     234799999999999876      445789999999999999999          788865432  


Q ss_pred             ---HHHHHHHHhcCCCCCCCC-----CCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHH
Q 008656          495 ---LQAAVGVVQKGLRPTIPK-----NSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKE  549 (558)
Q Consensus       495 ---~~~~~~v~~~~~r~~ip~-----~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~  549 (558)
                         .+....+.....++.++.     .+++.+.+|+.+||+.||.+|||+.++++.|+++.++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~  298 (303)
T 3gxj_A          236 PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             CCCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC
T ss_pred             ccHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhh
Confidence               222333445555666664     3446899999999999999999999999999987653


No 217
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00  E-value=3.8e-43  Score=368.77  Aligned_cols=257  Identities=14%  Similarity=0.141  Sum_probs=194.4

Q ss_pred             CCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCC-hHHHHHHHHHHHHHHhc--cCCCceEEEe-------ee
Q 008656          291 PKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERIN-SDMQKEFAQEVFIMRKV--RHKNVVQFIG-------AC  358 (558)
Q Consensus       291 ~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~-~~~~~~~~~Ev~iL~~l--~HpnIv~l~g-------~~  358 (558)
                      ..+|++.++||+|+||.||+|++.  ++.||||+++..... ......+.+|+.+++.+  +||||++++.       ++
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~  140 (371)
T 3q60_A           61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV  140 (371)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred             ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence            346999999999999999999974  778999999986543 34456778886555555  5999888663       33


Q ss_pred             cCC-----------------CCceeEEEecCCCCHHHHHHhhccCCCHHHH------HHHHHHHHHHHHHHHHCCceecc
Q 008656          359 TKP-----------------PSLCIVTEFMSGGSVYDYLHKLKGVFKLPSL------LKVAIDVSKGMNYLHQNNIIHRD  415 (558)
Q Consensus       359 ~~~-----------------~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~------~~i~~qI~~aL~yLH~~gIiHrD  415 (558)
                      ..+                 ..+||||||++ ++|.+++......++....      +.++.||+.||+|||++||+|||
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrD  219 (371)
T 3q60_A          141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGH  219 (371)
T ss_dssp             EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETT
T ss_pred             ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCc
Confidence            221                 23799999997 8999999876556666666      78889999999999999999999


Q ss_pred             CCCCcEEeCCCCcEEEEecCcceecccCCccccCCCCCCccchhhhcC--CCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 008656          416 LKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEH--KPYDHKADVFSFGIVLWELLTGKLPYEYLT  493 (558)
Q Consensus       416 LKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~APEv~~~--~~~s~ksDVwSlGilL~elltG~~Pf~~~~  493 (558)
                      |||+|||++.++.+||+|||+++.....  .....+|+.|+|||++.+  ..|+.++|||||||++|+|++|+.||....
T Consensus       220 ikp~NIll~~~~~~kL~DFG~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~  297 (371)
T 3q60_A          220 FTPDNLFIMPDGRLMLGDVSALWKVGTR--GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVT  297 (371)
T ss_dssp             CSGGGEEECTTSCEEECCGGGEEETTCE--EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCC
T ss_pred             CCHHHEEECCCCCEEEEecceeeecCCC--ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcC
Confidence            9999999999999999999999865432  224567799999999988  789999999999999999999999998764


Q ss_pred             HHHHHH-------HHHhcCCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH--HHHHHHHHH
Q 008656          494 PLQAAV-------GVVQKGLRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIE--ILQQIAKEV  550 (558)
Q Consensus       494 ~~~~~~-------~v~~~~~r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~--~L~~l~~~~  550 (558)
                      +.....       ...........+..+++.+.+||.+||+.||.+||++.++++  .++++..+.
T Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~  363 (371)
T 3q60_A          298 PGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQNEI  363 (371)
T ss_dssp             TTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHHHHHH
T ss_pred             cccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHHHHHH
Confidence            321100       000111122233578999999999999999999999999984  566655443


No 218
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00  E-value=9.2e-43  Score=366.78  Aligned_cols=251  Identities=25%  Similarity=0.410  Sum_probs=197.0

Q ss_pred             CceeeCCCceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCC-
Q 008656          285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKP-  361 (558)
Q Consensus       285 ~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~-  361 (558)
                      ..|++. ++|++.+.||+|+||.||+|.+  +++.||||++..........+.+.+|+.+++.++||||+++++++... 
T Consensus        23 ~~~~~~-~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~  101 (367)
T 2fst_X           23 TIWEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR  101 (367)
T ss_dssp             EEEEEE-TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCS
T ss_pred             cccCCC-CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCC
Confidence            466665 7899999999999999999987  478899999987655566678899999999999999999999998654 


Q ss_pred             -----CCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCc
Q 008656          362 -----PSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGV  436 (558)
Q Consensus       362 -----~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~  436 (558)
                           ..+|+|||++ +++|.+++..  +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus       102 ~~~~~~~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~  178 (367)
T 2fst_X          102 SLEEFNDVYLVTHLM-GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGL  178 (367)
T ss_dssp             SGGGCCCCEEEEECC-CEECC-------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC---
T ss_pred             ccccCCeEEEEeccc-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeeccc
Confidence                 5679999999 8899999865  5799999999999999999999999999999999999999999999999999


Q ss_pred             ceecccCCccccCCCCCCccchhhhcC-CCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCC-------
Q 008656          437 ARVKAQSGVMTAETGTYRWMAPEVIEH-KPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRP-------  508 (558)
Q Consensus       437 a~~~~~~~~~~~~~gt~~y~APEv~~~-~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~-------  508 (558)
                      ++....  ..+...||+.|+|||++.+ ..|+.++|||||||++|+|++|+.||.+.+.......+......+       
T Consensus       179 a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~  256 (367)
T 2fst_X          179 ARHTAD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK  256 (367)
T ss_dssp             --------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTT
T ss_pred             cccccc--cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence            976543  2455689999999999987 789999999999999999999999999888766554443211100       


Q ss_pred             --------------C--------CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          509 --------------T--------IPKNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       509 --------------~--------ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                                    .        .....++.+.+||.+||..||.+|||+.++++
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~  311 (367)
T 2fst_X          257 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  311 (367)
T ss_dssp             CCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence                          0        11356789999999999999999999999875


No 219
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00  E-value=5.6e-43  Score=374.60  Aligned_cols=249  Identities=24%  Similarity=0.411  Sum_probs=199.3

Q ss_pred             CCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCC------hHHHHHHHHHHHHHHhccCCCceEEEeeecCCC
Q 008656          291 PKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERIN------SDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPP  362 (558)
Q Consensus       291 ~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~------~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~  362 (558)
                      .++|++.++||+|+||.||+|.+.  ++.||||++......      ......+.+|+.+|++++||||+++++++..+ 
T Consensus       134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-  212 (419)
T 3i6u_A          134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE-  212 (419)
T ss_dssp             HTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESS-
T ss_pred             hccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecC-
Confidence            368999999999999999999884  678999998764321      12233588999999999999999999998654 


Q ss_pred             CceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCC---cEEEEecCccee
Q 008656          363 SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENE---VVKVADFGVARV  439 (558)
Q Consensus       363 ~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~---~vkL~DFG~a~~  439 (558)
                      ..|+||||++|++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++   .+||+|||+++.
T Consensus       213 ~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~  291 (419)
T 3i6u_A          213 DYYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI  291 (419)
T ss_dssp             EEEEEEECCTTCBGGGGTSS-SCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTS
T ss_pred             ceEEEEEcCCCCcHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeeccccee
Confidence            57999999999999999865 56799999999999999999999999999999999999997544   599999999987


Q ss_pred             cccCCccccCCCCCCccchhhhc---CCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCC---CCCC
Q 008656          440 KAQSGVMTAETGTYRWMAPEVIE---HKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPT---IPKN  513 (558)
Q Consensus       440 ~~~~~~~~~~~gt~~y~APEv~~---~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~---ip~~  513 (558)
                      ...........||+.|+|||++.   ...|+.++|||||||++|+|++|..||............+..+....   ....
T Consensus       292 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~  371 (419)
T 3i6u_A          292 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAE  371 (419)
T ss_dssp             CC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHHTT
T ss_pred             cCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhhcc
Confidence            76665566778999999999985   36788999999999999999999999986544333333333332222   2356


Q ss_pred             CcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          514 SQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       514 ~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                      +++.+.+||.+||+.||.+||++.++++
T Consensus       372 ~~~~~~~li~~~L~~dP~~Rps~~e~l~  399 (419)
T 3i6u_A          372 VSEKALDLVKKLLVVDPKARFTTEEALR  399 (419)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             cCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence            8899999999999999999999999985


No 220
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00  E-value=4.4e-42  Score=361.19  Aligned_cols=251  Identities=27%  Similarity=0.433  Sum_probs=212.1

Q ss_pred             CCceeeCCCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCC
Q 008656          284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKP  361 (558)
Q Consensus       284 ~~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~  361 (558)
                      ...|++. ++|.+.+.||+|+||.||+|.+.  ++.||||+++...........+.+|+.+++.++||||+++++++...
T Consensus        35 ~~~~~l~-~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~  113 (371)
T 4exu_A           35 KTAWELP-KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPA  113 (371)
T ss_dssp             TEEEEEE-TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSC
T ss_pred             cceeccc-ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheecc
Confidence            4566665 78999999999999999999874  78899999987766666678899999999999999999999999877


Q ss_pred             CCc------eeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecC
Q 008656          362 PSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFG  435 (558)
Q Consensus       362 ~~~------~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG  435 (558)
                      ...      |+||||+. ++|.+++.   ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||
T Consensus       114 ~~~~~~~~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg  189 (371)
T 4exu_A          114 SSLRNFYDFYLVMPFMQ-TDLQKIMG---MEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFG  189 (371)
T ss_dssp             SSSTTCCCCEEEEECCC-EEHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTT
T ss_pred             CCcccceeEEEEEcccc-ccHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecC
Confidence            655      99999995 68888873   459999999999999999999999999999999999999999999999999


Q ss_pred             cceecccCCccccCCCCCCccchhhhcC-CCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCC------
Q 008656          436 VARVKAQSGVMTAETGTYRWMAPEVIEH-KPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRP------  508 (558)
Q Consensus       436 ~a~~~~~~~~~~~~~gt~~y~APEv~~~-~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~------  508 (558)
                      +++....  ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...+..+....+......+      
T Consensus       190 ~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  267 (371)
T 4exu_A          190 LARHADA--EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQ  267 (371)
T ss_dssp             CC----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHT
T ss_pred             ccccccc--CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHH
Confidence            9975543  2445678999999999987 789999999999999999999999999888776665554321111      


Q ss_pred             -----------------------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          509 -----------------------TIPKNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       509 -----------------------~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                                             ..+..+++.+.+||.+||+.||.+|||+.|+++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  323 (371)
T 4exu_A          268 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  323 (371)
T ss_dssp             TCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             HhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence                                   112457899999999999999999999999874


No 221
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00  E-value=1.6e-42  Score=371.09  Aligned_cols=243  Identities=25%  Similarity=0.338  Sum_probs=202.2

Q ss_pred             CceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecC------CCC
Q 008656          292 KHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTK------PPS  363 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~------~~~  363 (558)
                      .+|++.+.||+|+||.||+|++  .++.||||++....      ..+.+|+.+|+.++||||+++++++..      ...
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~------~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~  127 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY  127 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT------TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc------hhHHHHHHHHHHcCCCCccceeeEEeccCCCCccee
Confidence            4699999999999999999998  47889999987542      123469999999999999999998732      223


Q ss_pred             ceeEEEecCCCCHHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCC-CcEEEEecCccee
Q 008656          364 LCIVTEFMSGGSVYDYLHK---LKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN-EVVKVADFGVARV  439 (558)
Q Consensus       364 ~~lV~E~~~ggsL~~~l~~---~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~-~~vkL~DFG~a~~  439 (558)
                      +++||||+++ +|.+++..   ....+++..++.++.||+.||.|||++||+||||||+|||++.+ +.+||+|||+++.
T Consensus       128 ~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~  206 (420)
T 1j1b_A          128 LNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ  206 (420)
T ss_dssp             EEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             EEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhh
Confidence            6799999965 77776643   34679999999999999999999999999999999999999965 5789999999987


Q ss_pred             cccCCccccCCCCCCccchhhhcCC-CCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCC-----------
Q 008656          440 KAQSGVMTAETGTYRWMAPEVIEHK-PYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLR-----------  507 (558)
Q Consensus       440 ~~~~~~~~~~~gt~~y~APEv~~~~-~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r-----------  507 (558)
                      ...........||+.|+|||++.+. .|+.++|||||||++|||++|+.||.+.+..+....++.....           
T Consensus       207 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~  286 (420)
T 1j1b_A          207 LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP  286 (420)
T ss_dssp             CCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCS
T ss_pred             cccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhCh
Confidence            6655555667899999999999765 7999999999999999999999999998876665555432100           


Q ss_pred             -------CC---------CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          508 -------PT---------IPKNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       508 -------~~---------ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                             +.         ++..+++++.+||.+||..||.+||++.|+++
T Consensus       287 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~  336 (420)
T 1j1b_A          287 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  336 (420)
T ss_dssp             CCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence                   00         23467899999999999999999999999874


No 222
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00  E-value=1.5e-42  Score=361.83  Aligned_cols=251  Identities=22%  Similarity=0.317  Sum_probs=202.5

Q ss_pred             CCCceeeeeeeeecCceEEEEEEE-CCceEEEEEecCCCC---------ChHHHHHHHHHHHHHHhccCCCceEEEeee-
Q 008656          290 DPKHLKFGSKVASGSYGDLYRGTY-CSQDVAIKVLKPERI---------NSDMQKEFAQEVFIMRKVRHKNVVQFIGAC-  358 (558)
Q Consensus       290 ~~~~~~i~~~LG~GsfG~Vy~g~~-~~~~VAIKvlk~~~~---------~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~-  358 (558)
                      -.++|++.+.||+|+||.||+|.+ .++.||||++.....         .....+.+.+|+.++++++||||+++++++ 
T Consensus        20 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   99 (362)
T 3pg1_A           20 MQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFV   99 (362)
T ss_dssp             TTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEE
T ss_pred             hccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEE
Confidence            346899999999999999999986 477899999865432         123347899999999999999999999988 


Q ss_pred             ----cCCCCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEec
Q 008656          359 ----TKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADF  434 (558)
Q Consensus       359 ----~~~~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DF  434 (558)
                          .....+|+||||+. |+|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+||
T Consensus       100 ~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Df  178 (362)
T 3pg1_A          100 HFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDF  178 (362)
T ss_dssp             ECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCT
T ss_pred             eccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEEEec
Confidence                33446799999996 6999999876678999999999999999999999999999999999999999999999999


Q ss_pred             CcceecccCCccccCCCCCCccchhhhcC-CCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCC-----
Q 008656          435 GVARVKAQSGVMTAETGTYRWMAPEVIEH-KPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRP-----  508 (558)
Q Consensus       435 G~a~~~~~~~~~~~~~gt~~y~APEv~~~-~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~-----  508 (558)
                      |+++............||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...+.......+......+     
T Consensus       179 g~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  258 (362)
T 3pg1_A          179 NLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDV  258 (362)
T ss_dssp             TC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred             CcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHh
Confidence            99986665555566789999999999977 779999999999999999999999999887766655544321111     


Q ss_pred             -------------------------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          509 -------------------------TIPKNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       509 -------------------------~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                                               ..+..+++.+.+||.+||+.||.+|||+.|+++
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  316 (362)
T 3pg1_A          259 VMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR  316 (362)
T ss_dssp             HHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             hhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence                                     122456889999999999999999999999975


No 223
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00  E-value=4.8e-42  Score=374.37  Aligned_cols=256  Identities=22%  Similarity=0.350  Sum_probs=215.4

Q ss_pred             CCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccC-CCceEEEeeecCCCCceeE
Q 008656          291 PKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRH-KNVVQFIGACTKPPSLCIV  367 (558)
Q Consensus       291 ~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~H-pnIv~l~g~~~~~~~~~lV  367 (558)
                      .++|+++++||+|+||.||+|++.  ++.||||+++.....    ..+.+|+.+++.++| ++|+.+..++......|||
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~----~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lv   81 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLV   81 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS----CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc----HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEE
Confidence            368999999999999999999974  788999998765433    347789999999987 5555666666777788999


Q ss_pred             EEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEe---CCCCcEEEEecCcceecccCC
Q 008656          368 TEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM---DENEVVKVADFGVARVKAQSG  444 (558)
Q Consensus       368 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl---~~~~~vkL~DFG~a~~~~~~~  444 (558)
                      |||+ |++|.+++....+.+++..++.|+.||+.||.|||++||+||||||+||||   +.++.+||+|||+++......
T Consensus        82 me~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~  160 (483)
T 3sv0_A           82 MDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTS  160 (483)
T ss_dssp             EECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred             EECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCc
Confidence            9999 999999998777889999999999999999999999999999999999999   588999999999998655432


Q ss_pred             c--------cccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCH---HHHHHHHHhcCCC---CCC
Q 008656          445 V--------MTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTP---LQAAVGVVQKGLR---PTI  510 (558)
Q Consensus       445 ~--------~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~---~~~~~~v~~~~~r---~~i  510 (558)
                      .        .....||+.|+|||++.+..++.++|||||||+||||++|+.||.....   .+....+......   ..+
T Consensus       161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l  240 (483)
T 3sv0_A          161 THQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEAL  240 (483)
T ss_dssp             TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHH
T ss_pred             cccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHH
Confidence            2        1255799999999999999999999999999999999999999987543   3333333222211   223


Q ss_pred             CCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHH
Q 008656          511 PKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIAKEVY  551 (558)
Q Consensus       511 p~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~~  551 (558)
                      +..+++++.+||.+||..+|.+||++.+|++.|+++.....
T Consensus       241 ~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~  281 (483)
T 3sv0_A          241 CRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREG  281 (483)
T ss_dssp             HTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             hcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcC
Confidence            46788999999999999999999999999999999987654


No 224
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00  E-value=1.2e-41  Score=365.41  Aligned_cols=245  Identities=26%  Similarity=0.406  Sum_probs=208.5

Q ss_pred             CCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhc------cCCCceEEEeeecCCC
Q 008656          291 PKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKV------RHKNVVQFIGACTKPP  362 (558)
Q Consensus       291 ~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l------~HpnIv~l~g~~~~~~  362 (558)
                      ..+|++.++||+|+||.||+|.+.  ++.||||+++..   ......+.+|+.+++.+      +|+||+++++++....
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  172 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE---KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN  172 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc---cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC
Confidence            467999999999999999999884  678999999854   34456788899999888      4679999999999999


Q ss_pred             CceeEEEecCCCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCc--EEEEecCccee
Q 008656          363 SLCIVTEFMSGGSVYDYLHKLK-GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV--VKVADFGVARV  439 (558)
Q Consensus       363 ~~~lV~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~--vkL~DFG~a~~  439 (558)
                      .+|+||||+ +++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++.
T Consensus       173 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~  251 (429)
T 3kvw_A          173 HICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY  251 (429)
T ss_dssp             EEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred             eEEEEEecc-CCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeeccccee
Confidence            999999999 569999997644 35999999999999999999999999999999999999999887  99999999976


Q ss_pred             cccCCccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCC-----------
Q 008656          440 KAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRP-----------  508 (558)
Q Consensus       440 ~~~~~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~-----------  508 (558)
                      ...  ......||+.|+|||++.+..|+.++|||||||++|||++|..||.+.+..+....+......+           
T Consensus       252 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~  329 (429)
T 3kvw_A          252 EHQ--RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRA  329 (429)
T ss_dssp             TTC--CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTH
T ss_pred             cCC--cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhh
Confidence            543  2345689999999999999999999999999999999999999999888766554443210000           


Q ss_pred             ----------------------------------------------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          509 ----------------------------------------------TIPKNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       509 ----------------------------------------------~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                                                                    .++...++.+.+||.+||+.||.+|||+.|+++
T Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~  408 (429)
T 3kvw_A          330 KNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALR  408 (429)
T ss_dssp             HHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhC
Confidence                                                          012244788999999999999999999999985


No 225
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00  E-value=7.6e-42  Score=347.11  Aligned_cols=247  Identities=24%  Similarity=0.425  Sum_probs=208.8

Q ss_pred             CceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCC--hHHHHHHHHHHHHHHhccCCCceEEEeee--cCCCCce
Q 008656          292 KHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERIN--SDMQKEFAQEVFIMRKVRHKNVVQFIGAC--TKPPSLC  365 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~--~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~--~~~~~~~  365 (558)
                      ++|++.+.||+|+||.||++.+  .++.||+|+++.....  ......+.+|+.++++++||||+++++++  ......|
T Consensus         5 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (305)
T 2wtk_C            5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY   84 (305)
T ss_dssp             CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEE
T ss_pred             cceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEE
Confidence            5799999999999999999998  4678999999754321  23457799999999999999999999998  4556889


Q ss_pred             eEEEecCCCCHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccC-
Q 008656          366 IVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQS-  443 (558)
Q Consensus       366 lV~E~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~-  443 (558)
                      +||||+.++ |.+++... ...+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++...... 
T Consensus        85 lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~  163 (305)
T 2wtk_C           85 MVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFA  163 (305)
T ss_dssp             EEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTC
T ss_pred             EEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCccc
Confidence            999999766 77777653 456999999999999999999999999999999999999999999999999999865432 


Q ss_pred             --CccccCCCCCCccchhhhcCCC--CCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHH
Q 008656          444 --GVMTAETGTYRWMAPEVIEHKP--YDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLA  519 (558)
Q Consensus       444 --~~~~~~~gt~~y~APEv~~~~~--~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~  519 (558)
                        .......||+.|+|||++.+..  ++.++||||||+++|+|++|..||...+..+....+...  ...++..+++.+.
T Consensus       164 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~--~~~~~~~~~~~l~  241 (305)
T 2wtk_C          164 ADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKG--SYAIPGDCGPPLS  241 (305)
T ss_dssp             SSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHC--CCCCCSSSCHHHH
T ss_pred             cccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcC--CCCCCCccCHHHH
Confidence              2334557899999999998754  478999999999999999999999988776665554433  3457788999999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHH
Q 008656          520 ELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       520 ~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                      +||.+||..||.+||++.++++
T Consensus       242 ~li~~~l~~dp~~Rps~~~ll~  263 (305)
T 2wtk_C          242 DLLKGMLEYEPAKRFSIRQIRQ  263 (305)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHccCChhhCCCHHHHhc
Confidence            9999999999999999999985


No 226
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00  E-value=8.3e-42  Score=357.69  Aligned_cols=246  Identities=24%  Similarity=0.395  Sum_probs=207.0

Q ss_pred             CceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCC-----CCc
Q 008656          292 KHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKP-----PSL  364 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~-----~~~  364 (558)
                      .+|++.+.||+|+||.||++.+.  ++.||||++.... .......+.+|+.++++++||||+++++++...     ...
T Consensus        27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  105 (364)
T 3qyz_A           27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV  105 (364)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT-CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc-CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence            68999999999999999999874  6789999998543 344557899999999999999999999998654     468


Q ss_pred             eeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccCC
Q 008656          365 CIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSG  444 (558)
Q Consensus       365 ~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~  444 (558)
                      |+||||+. ++|.+++..  +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus       106 ~iv~e~~~-~~L~~~l~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~  182 (364)
T 3qyz_A          106 YIVQDLME-TDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH  182 (364)
T ss_dssp             EEEEECCS-EEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGG
T ss_pred             EEEEcccC-cCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCC
Confidence            99999995 599999965  569999999999999999999999999999999999999999999999999998655432


Q ss_pred             ----ccccCCCCCCccchhhhc-CCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCC-----------
Q 008656          445 ----VMTAETGTYRWMAPEVIE-HKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRP-----------  508 (558)
Q Consensus       445 ----~~~~~~gt~~y~APEv~~-~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~-----------  508 (558)
                          ......||+.|+|||++. +..++.++|||||||++|+|++|+.||.+.+..+....+......+           
T Consensus       183 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  262 (364)
T 3qyz_A          183 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL  262 (364)
T ss_dssp             CBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCH
T ss_pred             CccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhh
Confidence                234557999999999875 4568999999999999999999999998877655444433211000           


Q ss_pred             ------------------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          509 ------------------TIPKNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       509 ------------------~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                                        .+...+++++.+||.+||..||.+|||+.|+++
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  313 (364)
T 3qyz_A          263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA  313 (364)
T ss_dssp             HHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                              112467899999999999999999999999975


No 227
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00  E-value=1.7e-41  Score=351.95  Aligned_cols=247  Identities=26%  Similarity=0.355  Sum_probs=206.2

Q ss_pred             CCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCC-----CC
Q 008656          291 PKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKP-----PS  363 (558)
Q Consensus       291 ~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~-----~~  363 (558)
                      .++|++.+.||+|+||.||+|++.  ++.||||+++... .......+.+|+.++++++||||+++++++...     ..
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   88 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD-KPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE   88 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCS-SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccc-cchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence            368999999999999999999985  7889999997542 344567788999999999999999999987653     67


Q ss_pred             ceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccC
Q 008656          364 LCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQS  443 (558)
Q Consensus       364 ~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~  443 (558)
                      .|+||||+. ++|.+++..  +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus        89 ~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~  165 (353)
T 2b9h_A           89 VYIIQELMQ-TDLHRVIST--QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDES  165 (353)
T ss_dssp             EEEEECCCS-EEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred             EEEEEeccC-ccHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecccccccccc
Confidence            899999995 699999875  57999999999999999999999999999999999999999999999999999865432


Q ss_pred             C-----------ccccCCCCCCccchhhhcC-CCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCC---
Q 008656          444 G-----------VMTAETGTYRWMAPEVIEH-KPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRP---  508 (558)
Q Consensus       444 ~-----------~~~~~~gt~~y~APEv~~~-~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~---  508 (558)
                      .           ......||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+....+......+   
T Consensus       166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  245 (353)
T 2b9h_A          166 AADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD  245 (353)
T ss_dssp             --------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCST
T ss_pred             cccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchh
Confidence            1           1223478999999998754 789999999999999999999999999887655444332211100   


Q ss_pred             ---------------------------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          509 ---------------------------TIPKNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       509 ---------------------------~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                                                 ..+..+++++.+||.+||..||.+|||+.++++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (353)
T 2b9h_A          246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE  305 (353)
T ss_dssp             TTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence                                       012467899999999999999999999999875


No 228
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00  E-value=8.4e-43  Score=361.09  Aligned_cols=250  Identities=21%  Similarity=0.381  Sum_probs=213.4

Q ss_pred             eCCCceeeeeeeeecCceEEEEEEECCceEEEEEecCCCCCh---------------HHHHHHHHHHHHHHhccCCCceE
Q 008656          289 IDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINS---------------DMQKEFAQEVFIMRKVRHKNVVQ  353 (558)
Q Consensus       289 i~~~~~~i~~~LG~GsfG~Vy~g~~~~~~VAIKvlk~~~~~~---------------~~~~~~~~Ev~iL~~l~HpnIv~  353 (558)
                      +..++|++.+.||+|+||.||++++.++.||||++.......               .....+.+|+.++++++||||++
T Consensus        28 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~  107 (348)
T 2pml_X           28 KYINDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT  107 (348)
T ss_dssp             EEETTEEEEEEEECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             cccCceEEEEEEcCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence            345789999999999999999999999999999987542211               11278999999999999999999


Q ss_pred             EEeeecCCCCceeEEEecCCCCHHHH------HHhh-ccCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCcEEeCC
Q 008656          354 FIGACTKPPSLCIVTEFMSGGSVYDY------LHKL-KGVFKLPSLLKVAIDVSKGMNYLHQ-NNIIHRDLKAANLLMDE  425 (558)
Q Consensus       354 l~g~~~~~~~~~lV~E~~~ggsL~~~------l~~~-~~~l~~~~~~~i~~qI~~aL~yLH~-~gIiHrDLKp~NILl~~  425 (558)
                      +++++...+..|+||||++|++|.++      +... ...+++..++.++.||+.||.|||+ +||+||||||+||+++.
T Consensus       108 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~  187 (348)
T 2pml_X          108 CEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDK  187 (348)
T ss_dssp             CSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECT
T ss_pred             EEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcC
Confidence            99999999999999999999999998      5432 4579999999999999999999999 99999999999999999


Q ss_pred             CCcEEEEecCcceecccCCccccCCCCCCccchhhhcCC-CCCc-hHHHHHHHHHHHHHHcCCCCCCCCCH-HHHHHHHH
Q 008656          426 NEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHK-PYDH-KADVFSFGIVLWELLTGKLPYEYLTP-LQAAVGVV  502 (558)
Q Consensus       426 ~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~APEv~~~~-~~s~-ksDVwSlGilL~elltG~~Pf~~~~~-~~~~~~v~  502 (558)
                      ++.+||+|||++...... ......||+.|+|||++.+. .++. ++||||||+++|+|++|..||...+. .+....+.
T Consensus       188 ~~~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~  266 (348)
T 2pml_X          188 NGRVKLSDFGESEYMVDK-KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIR  266 (348)
T ss_dssp             TSCEEECCCTTCEECBTT-EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHT
T ss_pred             CCcEEEeccccccccccc-cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHh
Confidence            999999999999865443 44556799999999999887 6776 99999999999999999999988776 44333333


Q ss_pred             hcCCCCCCC-------------------CCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          503 QKGLRPTIP-------------------KNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       503 ~~~~r~~ip-------------------~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                       .+ ...++                   ..+++.+.+||.+||..||.+||++.++++
T Consensus       267 -~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~  322 (348)
T 2pml_X          267 -TK-NIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK  322 (348)
T ss_dssp             -SC-CCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             -cc-CcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence             22 22333                   568999999999999999999999999985


No 229
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00  E-value=1.7e-41  Score=353.23  Aligned_cols=250  Identities=27%  Similarity=0.435  Sum_probs=209.3

Q ss_pred             CceeeCCCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCC
Q 008656          285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPP  362 (558)
Q Consensus       285 ~~~~i~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~  362 (558)
                      ..|++. ++|.+.+.||+|+||.||+|.+.  ++.||||++............+.+|+.+++.++||||+++++++....
T Consensus        18 ~~~~l~-~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   96 (353)
T 3coi_A           18 TAWELP-KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPAS   96 (353)
T ss_dssp             EEEEEE-TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCS
T ss_pred             cccccC-ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccc
Confidence            355554 68999999999999999999874  788999999876666666788999999999999999999999998765


Q ss_pred             C------ceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCc
Q 008656          363 S------LCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGV  436 (558)
Q Consensus       363 ~------~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~  436 (558)
                      .      +|+||||+. ++|.+++.   ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus        97 ~~~~~~~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~  172 (353)
T 3coi_A           97 SLRNFYDFYLVMPFMQ-TDLQKIMG---LKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGL  172 (353)
T ss_dssp             SGGGCCCCEEEEECCS-EEGGGTTT---SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred             ccccceeEEEEecccc-CCHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeeccc
Confidence            4      499999996 68888774   3589999999999999999999999999999999999999999999999999


Q ss_pred             ceecccCCccccCCCCCCccchhhhcC-CCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcC----------
Q 008656          437 ARVKAQSGVMTAETGTYRWMAPEVIEH-KPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKG----------  505 (558)
Q Consensus       437 a~~~~~~~~~~~~~gt~~y~APEv~~~-~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~----------  505 (558)
                      ++.....  .....||+.|+|||++.+ ..++.++||||||+++|+|++|..||.+.+..+....+....          
T Consensus       173 ~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  250 (353)
T 3coi_A          173 ARHADAE--MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQK  250 (353)
T ss_dssp             TTC----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTT
T ss_pred             ccCCCCC--ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence            9764432  345678999999999987 789999999999999999999999999887665544433210          


Q ss_pred             ----------------CC---CCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          506 ----------------LR---PTIPKNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       506 ----------------~r---~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                                      .+   ...+..+++.+.+||.+||..||.+||++.++++
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  305 (353)
T 3coi_A          251 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  305 (353)
T ss_dssp             CSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             HhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence                            01   1233567899999999999999999999999874


No 230
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00  E-value=6.6e-42  Score=363.29  Aligned_cols=244  Identities=25%  Similarity=0.364  Sum_probs=202.0

Q ss_pred             CCceeeeeeeeecCceEEEEEEEC-CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCC------C
Q 008656          291 PKHLKFGSKVASGSYGDLYRGTYC-SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPP------S  363 (558)
Q Consensus       291 ~~~~~i~~~LG~GsfG~Vy~g~~~-~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~------~  363 (558)
                      ..+|++.++||+|+||.||+|++. +..||+|.+.....      ...+|+.+++.++||||+++++++....      .
T Consensus        39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~  112 (394)
T 4e7w_A           39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVF  112 (394)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEE
T ss_pred             cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc------hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceE
Confidence            357999999999999999999984 45588887764321      1236999999999999999999984333      3


Q ss_pred             ceeEEEecCCCCHHHHHH---hhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeC-CCCcEEEEecCccee
Q 008656          364 LCIVTEFMSGGSVYDYLH---KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMD-ENEVVKVADFGVARV  439 (558)
Q Consensus       364 ~~lV~E~~~ggsL~~~l~---~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~-~~~~vkL~DFG~a~~  439 (558)
                      +|+||||++++ +...+.   .....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.
T Consensus       113 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~  191 (394)
T 4e7w_A          113 LNLVLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKI  191 (394)
T ss_dssp             EEEEEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             EEEEeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence            78999999764 444432   2256799999999999999999999999999999999999999 799999999999987


Q ss_pred             cccCCccccCCCCCCccchhhhcCC-CCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCC-----------
Q 008656          440 KAQSGVMTAETGTYRWMAPEVIEHK-PYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLR-----------  507 (558)
Q Consensus       440 ~~~~~~~~~~~gt~~y~APEv~~~~-~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r-----------  507 (558)
                      ...........||+.|+|||++.+. .|+.++|||||||++|+|++|+.||.+.+..+....+......           
T Consensus       192 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~  271 (394)
T 4e7w_A          192 LIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNP  271 (394)
T ss_dssp             CCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCG
T ss_pred             ccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhCh
Confidence            7666666677899999999999765 5999999999999999999999999998877666555432100           


Q ss_pred             -------C---------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          508 -------P---------TIPKNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       508 -------~---------~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                             +         .++..+++++.+||.+||..||.+|||+.|+++
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  321 (394)
T 4e7w_A          272 NYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC  321 (394)
T ss_dssp             GGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             hhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence                   0         123457899999999999999999999999875


No 231
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00  E-value=1.8e-41  Score=347.90  Aligned_cols=246  Identities=24%  Similarity=0.371  Sum_probs=207.0

Q ss_pred             CCCceeeeeeeeecCceEEEEEEE---CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCC------ceEEEeeecC
Q 008656          290 DPKHLKFGSKVASGSYGDLYRGTY---CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKN------VVQFIGACTK  360 (558)
Q Consensus       290 ~~~~~~i~~~LG~GsfG~Vy~g~~---~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~Hpn------Iv~l~g~~~~  360 (558)
                      -.++|++.+.||+|+||.||++.+   .++.||||+++..   ......+.+|+.+++.++|++      ++++++++..
T Consensus        12 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~   88 (339)
T 1z57_A           12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV---DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH   88 (339)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE
T ss_pred             ccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC---CchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc
Confidence            357899999999999999999987   4678999999753   344577889999999998764      9999999999


Q ss_pred             CCCceeEEEecCCCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCC--------------
Q 008656          361 PPSLCIVTEFMSGGSVYDYLHKLK-GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDE--------------  425 (558)
Q Consensus       361 ~~~~~lV~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~--------------  425 (558)
                      .+.+|+||||+ +++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.              
T Consensus        89 ~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~  167 (339)
T 1z57_A           89 HGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRD  167 (339)
T ss_dssp             TTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred             CCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccc
Confidence            99999999999 899999997643 36899999999999999999999999999999999999987              


Q ss_pred             -----CCcEEEEecCcceecccCCccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Q 008656          426 -----NEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVG  500 (558)
Q Consensus       426 -----~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~  500 (558)
                           ++.+||+|||+++.....  .....||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+....
T Consensus       168 ~~~~~~~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~  245 (339)
T 1z57_A          168 ERTLINPDIKVVDFGSATYDDEH--HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAM  245 (339)
T ss_dssp             EEEESCCCEEECCCSSCEETTSC--CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHH
T ss_pred             cccccCCCceEeeCcccccCccc--cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence                 668999999999865432  3456789999999999999999999999999999999999999998776554333


Q ss_pred             HHhcCCC------------------------------------------CCCCCCCcHHHHHHHHHhhhcCCCCCCCHHH
Q 008656          501 VVQKGLR------------------------------------------PTIPKNSQPKLAELLERCWQQDPALRPDFSE  538 (558)
Q Consensus       501 v~~~~~r------------------------------------------~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~e  538 (558)
                      +......                                          ...+...++.+.+||.+||..||.+|||+.|
T Consensus       246 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e  325 (339)
T 1z57_A          246 MERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLRE  325 (339)
T ss_dssp             HHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             HHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHH
Confidence            2111000                                          0112234678999999999999999999999


Q ss_pred             HHH
Q 008656          539 IIE  541 (558)
Q Consensus       539 ll~  541 (558)
                      +++
T Consensus       326 ll~  328 (339)
T 1z57_A          326 ALK  328 (339)
T ss_dssp             HTT
T ss_pred             Hhc
Confidence            874


No 232
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00  E-value=9.2e-42  Score=344.51  Aligned_cols=244  Identities=24%  Similarity=0.448  Sum_probs=198.3

Q ss_pred             CceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecC---------
Q 008656          292 KHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTK---------  360 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~---------  360 (558)
                      ++|++.+.||+|+||.||+|+.  .++.||||+++..   ......+.+|+.++++++||||+++++++..         
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   82 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT---EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT   82 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE---HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred             ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc---HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence            4789999999999999999997  4788999998643   3455789999999999999999999998743         


Q ss_pred             ----CCCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCc
Q 008656          361 ----PPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGV  436 (558)
Q Consensus       361 ----~~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~  436 (558)
                          ....|+||||++|++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus        83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~  162 (303)
T 1zy4_A           83 AVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGL  162 (303)
T ss_dssp             ---CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred             ccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcc
Confidence                3467999999999999999987666788899999999999999999999999999999999999999999999999


Q ss_pred             ceecccC---------------CccccCCCCCCccchhhhcCC-CCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Q 008656          437 ARVKAQS---------------GVMTAETGTYRWMAPEVIEHK-PYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVG  500 (558)
Q Consensus       437 a~~~~~~---------------~~~~~~~gt~~y~APEv~~~~-~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~  500 (558)
                      ++.....               .......||+.|+|||++.+. .++.++||||||+++|+|++   ||...........
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~  239 (303)
T 1zy4_A          163 AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILK  239 (303)
T ss_dssp             CSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHH
T ss_pred             hhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHH
Confidence            9754321               123345689999999999865 79999999999999999998   5653322222222


Q ss_pred             HHhc---CCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          501 VVQK---GLRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       501 v~~~---~~r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                      .+..   ...+.++...++.+.++|.+||+.||.+|||+.++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  283 (303)
T 1zy4_A          240 KLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN  283 (303)
T ss_dssp             HHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence            2222   2334456677889999999999999999999999985


No 233
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00  E-value=1.9e-41  Score=345.25  Aligned_cols=246  Identities=24%  Similarity=0.370  Sum_probs=201.5

Q ss_pred             CCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeec---------
Q 008656          291 PKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACT---------  359 (558)
Q Consensus       291 ~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~---------  359 (558)
                      .++|++.+.||+|+||.||+|.+.  ++.||||++...  +....+.+.+|+.++++++||||+++++++.         
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   87 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT--DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDD   87 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC-
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC--ChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccc
Confidence            378999999999999999999985  788999998754  3455678999999999999999999998873         


Q ss_pred             -----CCCCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeC-CCCcEEEEe
Q 008656          360 -----KPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMD-ENEVVKVAD  433 (558)
Q Consensus       360 -----~~~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~-~~~~vkL~D  433 (558)
                           .....|+||||+. ++|.+++..  +.+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|
T Consensus        88 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~D  164 (320)
T 2i6l_A           88 VGSLTELNSVYIVQEYME-TDLANVLEQ--GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGD  164 (320)
T ss_dssp             ---CCSCSEEEEEEECCS-EEHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECC
T ss_pred             cccccccCceeEEeeccC-CCHHHHhhc--CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEcc
Confidence                 3456799999996 699999964  6789999999999999999999999999999999999997 567999999


Q ss_pred             cCcceecccC----CccccCCCCCCccchhhhcC-CCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCC-
Q 008656          434 FGVARVKAQS----GVMTAETGTYRWMAPEVIEH-KPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLR-  507 (558)
Q Consensus       434 FG~a~~~~~~----~~~~~~~gt~~y~APEv~~~-~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r-  507 (558)
                      ||+++.....    .......+|..|+|||++.+ ..++.++||||||+++|+|++|+.||...+..+....+...... 
T Consensus       165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  244 (320)
T 2i6l_A          165 FGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVV  244 (320)
T ss_dssp             CTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCC
T ss_pred             CccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence            9999865432    22334567999999999865 78999999999999999999999999988876665554432110 


Q ss_pred             ----------------------C-----CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          508 ----------------------P-----TIPKNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       508 ----------------------~-----~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                                            +     ..+..+++++.+||.+||+.||.+||++.++++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (320)
T 2i6l_A          245 HEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS  305 (320)
T ss_dssp             CHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             chhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence                                  0     122467899999999999999999999999975


No 234
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00  E-value=9.1e-42  Score=358.45  Aligned_cols=245  Identities=24%  Similarity=0.374  Sum_probs=201.5

Q ss_pred             CCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhcc--------CCCceEEEeeec-
Q 008656          291 PKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVR--------HKNVVQFIGACT-  359 (558)
Q Consensus       291 ~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~--------HpnIv~l~g~~~-  359 (558)
                      .++|++.++||+|+||.||+|++.  ++.||||+++..   ......+.+|+.+++.++        |+||+++++++. 
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~  112 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA---EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKI  112 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEE
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC---CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceee
Confidence            578999999999999999999874  678999999753   345577899999999996        788999999987 


Q ss_pred             ---CCCCceeEEEecCCCCHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCcEEeCCCC-------
Q 008656          360 ---KPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSKGMNYLHQN-NIIHRDLKAANLLMDENE-------  427 (558)
Q Consensus       360 ---~~~~~~lV~E~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qI~~aL~yLH~~-gIiHrDLKp~NILl~~~~-------  427 (558)
                         ....+|+||||+ +++|.+++... ...+++..++.++.||+.||.|||++ ||+||||||+|||++.++       
T Consensus       113 ~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~  191 (397)
T 1wak_A          113 SGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLA  191 (397)
T ss_dssp             EETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHH
T ss_pred             cCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhh
Confidence               566899999999 66777776543 35699999999999999999999998 999999999999999775       


Q ss_pred             ------------------------------------------cEEEEecCcceecccCCccccCCCCCCccchhhhcCCC
Q 008656          428 ------------------------------------------VVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKP  465 (558)
Q Consensus       428 ------------------------------------------~vkL~DFG~a~~~~~~~~~~~~~gt~~y~APEv~~~~~  465 (558)
                                                                .+||+|||+++.....  .....||+.|+|||++.+..
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~--~~~~~gt~~y~aPE~~~~~~  269 (397)
T 1wak_A          192 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH--FTEDIQTRQYRSLEVLIGSG  269 (397)
T ss_dssp             HHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC--SCSCCSCGGGCCHHHHHTSC
T ss_pred             hhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc--CccCCCCCcccCChhhcCCC
Confidence                                                      7999999999866543  44567999999999999999


Q ss_pred             CCchHHHHHHHHHHHHHHcCCCCCCCCCH------HHHHHHHHhc-CC--------------------------------
Q 008656          466 YDHKADVFSFGIVLWELLTGKLPYEYLTP------LQAAVGVVQK-GL--------------------------------  506 (558)
Q Consensus       466 ~s~ksDVwSlGilL~elltG~~Pf~~~~~------~~~~~~v~~~-~~--------------------------------  506 (558)
                      |+.++|||||||++|+|++|+.||...+.      ......+... +.                                
T Consensus       270 ~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  349 (397)
T 1wak_A          270 YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWG  349 (397)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCC
T ss_pred             CCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcc
Confidence            99999999999999999999999976542      1111111110 00                                


Q ss_pred             -------CCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          507 -------RPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       507 -------r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                             ....+...++.+.+||.+||+.||.+|||+.|+++
T Consensus       350 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  391 (397)
T 1wak_A          350 LFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR  391 (397)
T ss_dssp             HHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred             hhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence                   00122334577899999999999999999999875


No 235
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00  E-value=1.7e-41  Score=353.00  Aligned_cols=249  Identities=20%  Similarity=0.216  Sum_probs=196.0

Q ss_pred             eCCCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCC---
Q 008656          289 IDPKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS---  363 (558)
Q Consensus       289 i~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~---  363 (558)
                      ...++|++.++||+|+||.||+|++.  ++.||||++......   ...+.+++..++.++||||+++++++.....   
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~   96 (360)
T 3e3p_A           20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF---RNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDR   96 (360)
T ss_dssp             HHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTC---CCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCT
T ss_pred             hhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc---cHHHHHHHHHHHhcCCCCcccHHHhhhccccccc
Confidence            44468999999999999999999985  788999988654322   2356678888999999999999999854332   


Q ss_pred             ----ceeEEEecCCCCHHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHH--HCCceeccCCCCcEEeCC-CCcEEEEe
Q 008656          364 ----LCIVTEFMSGGSVYDYLHK---LKGVFKLPSLLKVAIDVSKGMNYLH--QNNIIHRDLKAANLLMDE-NEVVKVAD  433 (558)
Q Consensus       364 ----~~lV~E~~~ggsL~~~l~~---~~~~l~~~~~~~i~~qI~~aL~yLH--~~gIiHrDLKp~NILl~~-~~~vkL~D  433 (558)
                          +++||||+++ +|.+.+..   ....+++..++.++.||+.||.|||  ++||+||||||+|||++. ++.+||+|
T Consensus        97 ~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~D  175 (360)
T 3e3p_A           97 RDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCD  175 (360)
T ss_dssp             TCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECC
T ss_pred             cceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEee
Confidence                7899999965 66555432   2456899999999999999999999  999999999999999996 89999999


Q ss_pred             cCcceecccCCccccCCCCCCccchhhhcCC-CCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCC------
Q 008656          434 FGVARVKAQSGVMTAETGTYRWMAPEVIEHK-PYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGL------  506 (558)
Q Consensus       434 FG~a~~~~~~~~~~~~~gt~~y~APEv~~~~-~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~------  506 (558)
                      ||+++............||+.|+|||++.+. .++.++|||||||++|+|++|..||...+.......+.....      
T Consensus       176 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  255 (360)
T 3e3p_A          176 FGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREV  255 (360)
T ss_dssp             CTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHH
T ss_pred             CCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHH
Confidence            9999877666666677899999999999765 489999999999999999999999999887766655543111      


Q ss_pred             ------------------------CCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          507 ------------------------RPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       507 ------------------------r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                                              .+..+...++++.+||.+||+.||.+|||+.|+++
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  314 (360)
T 3e3p_A          256 LRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC  314 (360)
T ss_dssp             HHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence                                    11233346789999999999999999999999875


No 236
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00  E-value=3.4e-41  Score=344.16  Aligned_cols=244  Identities=25%  Similarity=0.461  Sum_probs=200.5

Q ss_pred             eeCCCceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCCh----HHHHHHHHHHHHHHhc----cCCCceEEEee
Q 008656          288 EIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINS----DMQKEFAQEVFIMRKV----RHKNVVQFIGA  357 (558)
Q Consensus       288 ~i~~~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~----~~~~~~~~Ev~iL~~l----~HpnIv~l~g~  357 (558)
                      +.-.++|++.+.||+|+||.||+|.+  .++.||||+++......    .....+.+|+.+++++    +||||++++++
T Consensus        27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~  106 (312)
T 2iwi_A           27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW  106 (312)
T ss_dssp             ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred             hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence            44557899999999999999999987  56789999997654322    1234466799999999    89999999999


Q ss_pred             ecCCCCceeEEEe-cCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeC-CCCcEEEEecC
Q 008656          358 CTKPPSLCIVTEF-MSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMD-ENEVVKVADFG  435 (558)
Q Consensus       358 ~~~~~~~~lV~E~-~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~-~~~~vkL~DFG  435 (558)
                      +...+..++|||| +.+++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+||+++ .++.+||+|||
T Consensus       107 ~~~~~~~~~v~e~~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg  185 (312)
T 2iwi_A          107 FETQEGFMLVLERPLPAQDLFDYITE-KGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG  185 (312)
T ss_dssp             C-----CEEEEECCSSEEEHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCS
T ss_pred             EecCCeEEEEEEecCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcc
Confidence            9999999999999 789999999987 56799999999999999999999999999999999999999 88999999999


Q ss_pred             cceecccCCccccCCCCCCccchhhhcCCCCC-chHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCCCC
Q 008656          436 VARVKAQSGVMTAETGTYRWMAPEVIEHKPYD-HKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNS  514 (558)
Q Consensus       436 ~a~~~~~~~~~~~~~gt~~y~APEv~~~~~~s-~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~  514 (558)
                      +++..... ......||..|+|||++.+..+. .++||||||+++|+|++|+.||.....      +..  ....++..+
T Consensus       186 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~--~~~~~~~~~  256 (312)
T 2iwi_A          186 SGALLHDE-PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE------ILE--AELHFPAHV  256 (312)
T ss_dssp             SCEECCSS-CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HHH--TCCCCCTTS
T ss_pred             hhhhcccC-cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH------Hhh--hccCCcccC
Confidence            99866543 34456799999999999877664 589999999999999999999975321      122  234567889


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          515 QPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       515 ~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                      ++.+.++|.+||..||.+||++.++++
T Consensus       257 ~~~~~~li~~~l~~~p~~Rps~~e~l~  283 (312)
T 2iwi_A          257 SPDCCALIRRCLAPKPSSRPSLEEILL  283 (312)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            999999999999999999999999986


No 237
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00  E-value=3.9e-41  Score=357.81  Aligned_cols=244  Identities=23%  Similarity=0.392  Sum_probs=184.0

Q ss_pred             ceee-eeeeeecCceEEEEEEEC----CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeee--cCCCCce
Q 008656          293 HLKF-GSKVASGSYGDLYRGTYC----SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGAC--TKPPSLC  365 (558)
Q Consensus       293 ~~~i-~~~LG~GsfG~Vy~g~~~----~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~--~~~~~~~  365 (558)
                      .|.+ +++||+|+||.||+|++.    ++.||||+++.....    ..+.+|+.+|++++||||+++++++  .....+|
T Consensus        21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~   96 (405)
T 3rgf_A           21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS----MSACREIALLRELKHPNVISLQKVFLSHADRKVW   96 (405)
T ss_dssp             HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCC----HHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEE
T ss_pred             hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCC----HHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEE
Confidence            4555 568999999999999964    577999999865433    4578899999999999999999998  5577899


Q ss_pred             eEEEecCCCCHHHHHHhhc--------cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEe----CCCCcEEEEe
Q 008656          366 IVTEFMSGGSVYDYLHKLK--------GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM----DENEVVKVAD  433 (558)
Q Consensus       366 lV~E~~~ggsL~~~l~~~~--------~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl----~~~~~vkL~D  433 (558)
                      +||||+. ++|.+++....        ..+++..++.++.||+.||.|||++||+||||||+|||+    +.++.+||+|
T Consensus        97 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~D  175 (405)
T 3rgf_A           97 LLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIAD  175 (405)
T ss_dssp             EEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECC
T ss_pred             EEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEE
Confidence            9999995 68988885322        248999999999999999999999999999999999999    6778999999


Q ss_pred             cCcceecccC----CccccCCCCCCccchhhhcC-CCCCchHHHHHHHHHHHHHHcCCCCCCCCCHH---------HHHH
Q 008656          434 FGVARVKAQS----GVMTAETGTYRWMAPEVIEH-KPYDHKADVFSFGIVLWELLTGKLPYEYLTPL---------QAAV  499 (558)
Q Consensus       434 FG~a~~~~~~----~~~~~~~gt~~y~APEv~~~-~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~---------~~~~  499 (558)
                      ||+++.....    .......||+.|+|||++.+ ..|+.++|||||||++|+|++|..||......         ....
T Consensus       176 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~  255 (405)
T 3rgf_A          176 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLD  255 (405)
T ss_dssp             TTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHH
T ss_pred             CCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHH
Confidence            9999865432    23345678999999999987 45999999999999999999999999755431         1222


Q ss_pred             HHHhcCCCCC------------------------------------CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          500 GVVQKGLRPT------------------------------------IPKNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       500 ~v~~~~~r~~------------------------------------ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                      .+...-..+.                                    .....++.+.+||.+||..||.+|||+.|+++
T Consensus       256 ~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~  333 (405)
T 3rgf_A          256 RIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ  333 (405)
T ss_dssp             HHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            2111100000                                    01122678999999999999999999999875


No 238
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00  E-value=1.7e-40  Score=343.06  Aligned_cols=245  Identities=23%  Similarity=0.401  Sum_probs=204.4

Q ss_pred             CCceeeeeeeeecCceEEEEEEEC--C-ceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCC------ceEEEeeecCC
Q 008656          291 PKHLKFGSKVASGSYGDLYRGTYC--S-QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKN------VVQFIGACTKP  361 (558)
Q Consensus       291 ~~~~~i~~~LG~GsfG~Vy~g~~~--~-~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~Hpn------Iv~l~g~~~~~  361 (558)
                      .++|++.+.||+|+||.||++.+.  + +.||+|+++..   ......+.+|+.++++++|++      ++.+++++...
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~   94 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV---GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFH   94 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEET
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc---ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeC
Confidence            578999999999999999999974  3 67999999753   344577889999999998766      89999999989


Q ss_pred             CCceeEEEecCCCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEe-----------------
Q 008656          362 PSLCIVTEFMSGGSVYDYLHKLK-GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM-----------------  423 (558)
Q Consensus       362 ~~~~lV~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl-----------------  423 (558)
                      +.+|+||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||+                 
T Consensus        95 ~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~  173 (355)
T 2eu9_A           95 GHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEE  173 (355)
T ss_dssp             TEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCE
T ss_pred             CeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccc
Confidence            9999999999 778888776543 469999999999999999999999999999999999999                 


Q ss_pred             --CCCCcEEEEecCcceecccCCccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Q 008656          424 --DENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGV  501 (558)
Q Consensus       424 --~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v  501 (558)
                        +.++.+||+|||+++.....  .....||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+....+
T Consensus       174 ~~~~~~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~  251 (355)
T 2eu9_A          174 KSVKNTSIRVADFGSATFDHEH--HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMM  251 (355)
T ss_dssp             EEESCCCEEECCCTTCEETTSC--CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             cccCCCcEEEeecCcccccccc--ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence              56789999999999864432  34567999999999999999999999999999999999999999987765544332


Q ss_pred             HhcCCC-C-----------------------------------------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHH
Q 008656          502 VQKGLR-P-----------------------------------------TIPKNSQPKLAELLERCWQQDPALRPDFSEI  539 (558)
Q Consensus       502 ~~~~~r-~-----------------------------------------~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~el  539 (558)
                      ...... +                                         ......++.+.+||.+||..||.+|||+.|+
T Consensus       252 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~  331 (355)
T 2eu9_A          252 EKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEA  331 (355)
T ss_dssp             HHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             HHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHH
Confidence            211000 0                                         0111234689999999999999999999999


Q ss_pred             HH
Q 008656          540 IE  541 (558)
Q Consensus       540 l~  541 (558)
                      ++
T Consensus       332 l~  333 (355)
T 2eu9_A          332 LL  333 (355)
T ss_dssp             TT
T ss_pred             hc
Confidence            73


No 239
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00  E-value=6.5e-41  Score=347.63  Aligned_cols=243  Identities=23%  Similarity=0.380  Sum_probs=175.4

Q ss_pred             Cceeeee-eeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecC----CCCc
Q 008656          292 KHLKFGS-KVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTK----PPSL  364 (558)
Q Consensus       292 ~~~~i~~-~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~----~~~~  364 (558)
                      ++|++.+ .||+|+||.||++.+.  ++.||||++...   .   ....+....++.++||||+++++++..    ...+
T Consensus        28 ~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~---~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~  101 (336)
T 3fhr_A           28 DDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS---P---KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL  101 (336)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS---H---HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             ceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc---H---HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence            5788855 6999999999999985  789999998753   1   122223334677789999999999865    4458


Q ss_pred             eeEEEecCCCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCC---CCcEEEEecCcceec
Q 008656          365 CIVTEFMSGGSVYDYLHKLK-GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDE---NEVVKVADFGVARVK  440 (558)
Q Consensus       365 ~lV~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~---~~~vkL~DFG~a~~~  440 (558)
                      ++||||++||+|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.   ++.+||+|||+++..
T Consensus       102 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~  181 (336)
T 3fhr_A          102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET  181 (336)
T ss_dssp             EEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceec
Confidence            99999999999999998644 36999999999999999999999999999999999999986   455999999999765


Q ss_pred             ccCCccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH------hcCCCCCCCCCC
Q 008656          441 AQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVV------QKGLRPTIPKNS  514 (558)
Q Consensus       441 ~~~~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~------~~~~r~~ip~~~  514 (558)
                      ... ......||+.|+|||++.+..++.++||||||+++|+|++|..||.............      ...........+
T Consensus       182 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (336)
T 3fhr_A          182 TQN-ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEV  260 (336)
T ss_dssp             -----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTC
T ss_pred             ccc-ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccC
Confidence            433 3345678999999999999999999999999999999999999997665443221111      111122233578


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          515 QPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       515 ~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                      ++++.+||.+||..||.+|||+.++++
T Consensus       261 ~~~~~~li~~~L~~dP~~Rpt~~ell~  287 (336)
T 3fhr_A          261 SEDAKQLIRLLLKTDPTERLTITQFMN  287 (336)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            999999999999999999999999986


No 240
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00  E-value=2.1e-41  Score=348.44  Aligned_cols=244  Identities=25%  Similarity=0.465  Sum_probs=208.4

Q ss_pred             eeCCCceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCCh----HHHHHHHHHHHHHHhcc--CCCceEEEeeec
Q 008656          288 EIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINS----DMQKEFAQEVFIMRKVR--HKNVVQFIGACT  359 (558)
Q Consensus       288 ~i~~~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~----~~~~~~~~Ev~iL~~l~--HpnIv~l~g~~~  359 (558)
                      +.-.++|++.+.||+|+||.||+|++  .++.||||+++......    .....+.+|+.++++++  |+||+++++++.
T Consensus        39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~  118 (320)
T 3a99_A           39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE  118 (320)
T ss_dssp             -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred             CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence            45568899999999999999999987  57889999997654322    12245778999999996  599999999999


Q ss_pred             CCCCceeEEEecCC-CCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeC-CCCcEEEEecCcc
Q 008656          360 KPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMD-ENEVVKVADFGVA  437 (558)
Q Consensus       360 ~~~~~~lV~E~~~g-gsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~-~~~~vkL~DFG~a  437 (558)
                      .++..++|||++.+ ++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++
T Consensus       119 ~~~~~~lv~e~~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~  197 (320)
T 3a99_A          119 RPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG  197 (320)
T ss_dssp             CSSEEEEEEECCSSEEEHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred             cCCcEEEEEEcCCCCccHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCccc
Confidence            99999999999976 899999976 56799999999999999999999999999999999999999 7889999999999


Q ss_pred             eecccCCccccCCCCCCccchhhhcCCCC-CchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcH
Q 008656          438 RVKAQSGVMTAETGTYRWMAPEVIEHKPY-DHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQP  516 (558)
Q Consensus       438 ~~~~~~~~~~~~~gt~~y~APEv~~~~~~-s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~  516 (558)
                      +..... ......||+.|+|||++.+..+ +.++||||||+++|+|++|..||.....      +...  ....+..+++
T Consensus       198 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~------~~~~--~~~~~~~~~~  268 (320)
T 3a99_A          198 ALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRG--QVFFRQRVSS  268 (320)
T ss_dssp             EECCSS-CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HHHC--CCCCSSCCCH
T ss_pred             cccccc-cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh------hhcc--cccccccCCH
Confidence            866543 3445679999999999987766 6889999999999999999999975421      1211  2346678899


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          517 KLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       517 ~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                      ++.+||.+||..||.+||++.++++
T Consensus       269 ~~~~li~~~l~~dp~~Rps~~~ll~  293 (320)
T 3a99_A          269 ECQHLIRWCLALRPSDRPTFEEIQN  293 (320)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhc
Confidence            9999999999999999999999976


No 241
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00  E-value=1.8e-40  Score=350.00  Aligned_cols=245  Identities=24%  Similarity=0.352  Sum_probs=204.6

Q ss_pred             CCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhcc-CC-----CceEEEeeecCCC
Q 008656          291 PKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVR-HK-----NVVQFIGACTKPP  362 (558)
Q Consensus       291 ~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~-Hp-----nIv~l~g~~~~~~  362 (558)
                      .++|++.++||+|+||.||+|.+.  ++.||||+++..   ......+..|+.+++.++ |+     +|+++++++...+
T Consensus        53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  129 (382)
T 2vx3_A           53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK---KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN  129 (382)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred             eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc---HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence            478999999999999999999874  678999999853   344567888999999886 44     4999999999889


Q ss_pred             CceeEEEecCCCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHH--HCCceeccCCCCcEEeC--CCCcEEEEecCcc
Q 008656          363 SLCIVTEFMSGGSVYDYLHKLK-GVFKLPSLLKVAIDVSKGMNYLH--QNNIIHRDLKAANLLMD--ENEVVKVADFGVA  437 (558)
Q Consensus       363 ~~~lV~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qI~~aL~yLH--~~gIiHrDLKp~NILl~--~~~~vkL~DFG~a  437 (558)
                      .+|+||||+. ++|.+++.... +.+++..++.++.||+.||.|||  +.||+||||||+|||++  .++.+||+|||++
T Consensus       130 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a  208 (382)
T 2vx3_A          130 HLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS  208 (382)
T ss_dssp             EEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred             ceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence            9999999995 59999997654 56899999999999999999999  57999999999999995  4778999999999


Q ss_pred             eecccCCccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCC--------
Q 008656          438 RVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPT--------  509 (558)
Q Consensus       438 ~~~~~~~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~--------  509 (558)
                      +....  ......||+.|+|||++.+..|+.++|||||||++|+|++|+.||...+..+....+......+.        
T Consensus       209 ~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  286 (382)
T 2vx3_A          209 CQLGQ--RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAP  286 (382)
T ss_dssp             EETTC--CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCT
T ss_pred             eeccc--ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhH
Confidence            87643  24456899999999999999999999999999999999999999998887766555443211000        


Q ss_pred             --------CCC----------------------------------------------CCcHHHHHHHHHhhhcCCCCCCC
Q 008656          510 --------IPK----------------------------------------------NSQPKLAELLERCWQQDPALRPD  535 (558)
Q Consensus       510 --------ip~----------------------------------------------~~~~~l~~Ll~~cL~~dP~~RPs  535 (558)
                              ++.                                              ...+.+.+||.+||+.||.+|||
T Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpt  366 (382)
T 2vx3_A          287 KARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQ  366 (382)
T ss_dssp             THHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCC
T ss_pred             HHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCC
Confidence                    000                                              01147899999999999999999


Q ss_pred             HHHHHH
Q 008656          536 FSEIIE  541 (558)
Q Consensus       536 ~~ell~  541 (558)
                      +.|+++
T Consensus       367 a~e~L~  372 (382)
T 2vx3_A          367 PYYALQ  372 (382)
T ss_dssp             HHHHTT
T ss_pred             HHHHhc
Confidence            999875


No 242
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00  E-value=8.3e-41  Score=349.01  Aligned_cols=248  Identities=20%  Similarity=0.376  Sum_probs=202.2

Q ss_pred             eeCCCceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCChHHHHHHHHHHHHHHhcc-----------CCCceEE
Q 008656          288 EIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVR-----------HKNVVQF  354 (558)
Q Consensus       288 ~i~~~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~-----------HpnIv~l  354 (558)
                      .+...+|++.+.||+|+||.||+|++  .++.||||+++..   ......+.+|+.++++++           |+||+++
T Consensus        15 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~   91 (373)
T 1q8y_A           15 PYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD---KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKL   91 (373)
T ss_dssp             EETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCC
T ss_pred             cccCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC---ccchhhhhHHHHHHHHhhcccccchhccccchHHHH
Confidence            45678999999999999999999997  5788999999853   334567889999999887           8899999


Q ss_pred             EeeecCCC----CceeEEEecCCCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCcEEeC----
Q 008656          355 IGACTKPP----SLCIVTEFMSGGSVYDYLHKLK-GVFKLPSLLKVAIDVSKGMNYLHQN-NIIHRDLKAANLLMD----  424 (558)
Q Consensus       355 ~g~~~~~~----~~~lV~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qI~~aL~yLH~~-gIiHrDLKp~NILl~----  424 (558)
                      ++++....    .+++||||+ |++|.+++.... ..+++..++.++.||+.||.|||++ ||+||||||+|||++    
T Consensus        92 ~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~  170 (373)
T 1q8y_A           92 LDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDS  170 (373)
T ss_dssp             CEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEET
T ss_pred             HHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCC
Confidence            99986543    689999999 999999997643 4599999999999999999999998 999999999999994    


Q ss_pred             --CCCcEEEEecCcceecccCCccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCH------HH
Q 008656          425 --ENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTP------LQ  496 (558)
Q Consensus       425 --~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~------~~  496 (558)
                        ..+.+||+|||+++.....  .....||+.|+|||++.+..++.++|||||||++|+|++|..||...+.      ..
T Consensus       171 ~~~~~~~kl~Dfg~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~  248 (373)
T 1q8y_A          171 PENLIQIKIADLGNACWYDEH--YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDD  248 (373)
T ss_dssp             TTTEEEEEECCCTTCEETTBC--CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHH
T ss_pred             CcCcceEEEcccccccccCCC--CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHH
Confidence              3448999999999766443  3455799999999999999999999999999999999999999986542      11


Q ss_pred             HHHHHHhc-C---------------------------------------CCCCCCCCCcHHHHHHHHHhhhcCCCCCCCH
Q 008656          497 AAVGVVQK-G---------------------------------------LRPTIPKNSQPKLAELLERCWQQDPALRPDF  536 (558)
Q Consensus       497 ~~~~v~~~-~---------------------------------------~r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~  536 (558)
                      ....+... +                                       ....++..+++++.+||.+||+.||.+|||+
T Consensus       249 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~  328 (373)
T 1q8y_A          249 HIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADA  328 (373)
T ss_dssp             HHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCH
T ss_pred             HHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCH
Confidence            11111110 0                                       0112344567889999999999999999999


Q ss_pred             HHHHH
Q 008656          537 SEIIE  541 (558)
Q Consensus       537 ~ell~  541 (558)
                      .|+++
T Consensus       329 ~ell~  333 (373)
T 1q8y_A          329 GGLVN  333 (373)
T ss_dssp             HHHHT
T ss_pred             HHHhh
Confidence            99975


No 243
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00  E-value=1.4e-40  Score=357.92  Aligned_cols=252  Identities=25%  Similarity=0.378  Sum_probs=199.9

Q ss_pred             CCceeeCCCceeeeeeeeecCceE-EEEEEECCceEEEEEecCCCCChHHHHHHHHHHHHHHhc-cCCCceEEEeeecCC
Q 008656          284 TDVWEIDPKHLKFGSKVASGSYGD-LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKV-RHKNVVQFIGACTKP  361 (558)
Q Consensus       284 ~~~~~i~~~~~~i~~~LG~GsfG~-Vy~g~~~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l-~HpnIv~l~g~~~~~  361 (558)
                      .+.+.+...+|.+.+.||+|+||. ||++...++.||||++.....     ..+.+|+.+|+++ +|||||++++++...
T Consensus        16 ~~~~~i~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~-----~~~~~E~~~l~~l~~HpnIv~l~~~~~~~   90 (432)
T 3p23_A           16 TSVVIVGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF-----SFADREVQLLRESDEHPNVIRYFCTEKDR   90 (432)
T ss_dssp             --CEEETTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE-----EECHHHHHHHHHSCCCTTBCCEEEEEEET
T ss_pred             CCcEEEccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH-----HHHHHHHHHHHhccCCCCcCeEEEEEecC
Confidence            345678888999999999999998 667777899999999976432     2356799999999 799999999999999


Q ss_pred             CCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCC-----CCcEEEEecCc
Q 008656          362 PSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDE-----NEVVKVADFGV  436 (558)
Q Consensus       362 ~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~-----~~~vkL~DFG~  436 (558)
                      ...||||||+. |+|.+++......+....++.++.||+.||.|||++||+||||||+|||++.     ...+||+|||+
T Consensus        91 ~~~~lv~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~  169 (432)
T 3p23_A           91 QFQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGL  169 (432)
T ss_dssp             TEEEEEEECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTE
T ss_pred             CEEEEEEECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccc
Confidence            99999999995 6999999876656677778899999999999999999999999999999953     23588999999


Q ss_pred             ceecccC----CccccCCCCCCccchhhhc---CCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcCCCC
Q 008656          437 ARVKAQS----GVMTAETGTYRWMAPEVIE---HKPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQAAVGVVQKGLRP  508 (558)
Q Consensus       437 a~~~~~~----~~~~~~~gt~~y~APEv~~---~~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~~~~v~~~~~r~  508 (558)
                      ++.....    .......||+.|+|||++.   +..++.++|||||||++|||++ |..||......+............
T Consensus       170 a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~  249 (432)
T 3p23_A          170 CKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDC  249 (432)
T ss_dssp             EECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCTT
T ss_pred             eeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCccc
Confidence            9865433    2334567999999999997   4678889999999999999999 999997665544433222111111


Q ss_pred             -CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          509 -TIPKNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       509 -~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                       ..+...++.+.+||.+||+.||.+||++.++++
T Consensus       250 ~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          250 LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             SCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence             112334567899999999999999999999983


No 244
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00  E-value=2.3e-39  Score=348.13  Aligned_cols=242  Identities=22%  Similarity=0.378  Sum_probs=188.6

Q ss_pred             CceeeeeeeeecCceEEE-EEEECCceEEEEEecCCCCChHHHHHHHHHHHHHHhc-cCCCceEEEeeecCCCCceeEEE
Q 008656          292 KHLKFGSKVASGSYGDLY-RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTE  369 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy-~g~~~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l-~HpnIv~l~g~~~~~~~~~lV~E  369 (558)
                      +.|.+.+.||+|+||+|| .+...++.||||++...     ....+.+|+.+++++ +||||+++++++.....+|||||
T Consensus        15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~-----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E   89 (434)
T 2rio_A           15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID-----FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALE   89 (434)
T ss_dssp             SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG-----GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred             heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH-----HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEe
Confidence            445667889999999996 45567899999998753     235678899999987 89999999999999999999999


Q ss_pred             ecCCCCHHHHHHhhccC------CCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCC-------------CcEE
Q 008656          370 FMSGGSVYDYLHKLKGV------FKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN-------------EVVK  430 (558)
Q Consensus       370 ~~~ggsL~~~l~~~~~~------l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~-------------~~vk  430 (558)
                      |+. |+|.+++......      .++..++.++.||+.||+|||++||+||||||+|||++.+             +.+|
T Consensus        90 ~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k  168 (434)
T 2rio_A           90 LCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL  168 (434)
T ss_dssp             CCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred             cCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEE
Confidence            995 6999999763221      1333567899999999999999999999999999999754             4899


Q ss_pred             EEecCcceecccCC-----ccccCCCCCCccchhhhcC-------CCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHH
Q 008656          431 VADFGVARVKAQSG-----VMTAETGTYRWMAPEVIEH-------KPYDHKADVFSFGIVLWELLT-GKLPYEYLTPLQA  497 (558)
Q Consensus       431 L~DFG~a~~~~~~~-----~~~~~~gt~~y~APEv~~~-------~~~s~ksDVwSlGilL~ellt-G~~Pf~~~~~~~~  497 (558)
                      |+|||+++......     ......||+.|+|||++.+       ..++.++|||||||++|||++ |..||........
T Consensus       169 L~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~  248 (434)
T 2rio_A          169 ISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES  248 (434)
T ss_dssp             ECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHH
T ss_pred             EcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHH
Confidence            99999998765432     1234579999999999976       679999999999999999999 9999986654432


Q ss_pred             HHHHHhcCCCCC-C----CCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          498 AVGVVQKGLRPT-I----PKNSQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       498 ~~~v~~~~~r~~-i----p~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                        .+........ .    +..+++++.+||.+||+.||.+||++.++++
T Consensus       249 --~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          249 --NIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             --HHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             --HHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence              2222222211 1    1234688999999999999999999999975


No 245
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00  E-value=2.3e-39  Score=329.14  Aligned_cols=232  Identities=13%  Similarity=0.166  Sum_probs=193.2

Q ss_pred             eCCCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCCC-hHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCce
Q 008656          289 IDPKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERIN-SDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLC  365 (558)
Q Consensus       289 i~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~~-~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~  365 (558)
                      +-.++|++.+.||+|+||.||+|++.  ++.||||+++..... ......+.+|+.++++++||||+++++++...+..|
T Consensus        28 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~  107 (286)
T 3uqc_A           28 IANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGL  107 (286)
T ss_dssp             ETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred             EecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEE
Confidence            44578999999999999999999985  789999999876543 455678999999999999999999999999999999


Q ss_pred             eEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccCCc
Q 008656          366 IVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGV  445 (558)
Q Consensus       366 lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~  445 (558)
                      +||||++|++|.+++..  + .....+.+++.||+.||+|||++||+||||||+|||++.+|.+||+++|          
T Consensus       108 lv~e~~~g~~L~~~l~~--~-~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~----------  174 (286)
T 3uqc_A          108 VVAEWIRGGSLQEVADT--S-PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPA----------  174 (286)
T ss_dssp             EEEECCCEEEHHHHHTT--C-CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCC----------
T ss_pred             EEEEecCCCCHHHHHhc--C-CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEecc----------
Confidence            99999999999999954  3 4566788999999999999999999999999999999999999998543          


Q ss_pred             cccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHH---HHHhcCCCC--CCCCCCcHHHHH
Q 008656          446 MTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAV---GVVQKGLRP--TIPKNSQPKLAE  520 (558)
Q Consensus       446 ~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~---~v~~~~~r~--~ip~~~~~~l~~  520 (558)
                               |++       +++.++|||||||++|+|++|+.||...+..+...   ........+  ..+..+++.+.+
T Consensus       175 ---------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  238 (286)
T 3uqc_A          175 ---------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISA  238 (286)
T ss_dssp             ---------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHH
T ss_pred             ---------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHH
Confidence                     333       37999999999999999999999998765432110   001111110  133578999999


Q ss_pred             HHHHhhhcCCCCCCCHHHHHHHHHHHHHHH
Q 008656          521 LLERCWQQDPALRPDFSEIIEILQQIAKEV  550 (558)
Q Consensus       521 Ll~~cL~~dP~~RPs~~ell~~L~~l~~~~  550 (558)
                      +|.+||+.||.+| |+.++++.|+++....
T Consensus       239 li~~~l~~dP~~R-s~~el~~~L~~~~~~~  267 (286)
T 3uqc_A          239 VAARSVQGDGGIR-SASTLLNLMQQATAVA  267 (286)
T ss_dssp             HHHHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred             HHHHHcccCCccC-CHHHHHHHHHHHhccC
Confidence            9999999999999 9999999999986543


No 246
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00  E-value=1.6e-39  Score=347.26  Aligned_cols=249  Identities=17%  Similarity=0.194  Sum_probs=191.7

Q ss_pred             CCCceeeeeeeeecCceEEEEEEEC--CceEEEEEecCCCC-ChHHHHHHHHHHHHHHhccC-CCc--------------
Q 008656          290 DPKHLKFGSKVASGSYGDLYRGTYC--SQDVAIKVLKPERI-NSDMQKEFAQEVFIMRKVRH-KNV--------------  351 (558)
Q Consensus       290 ~~~~~~i~~~LG~GsfG~Vy~g~~~--~~~VAIKvlk~~~~-~~~~~~~~~~Ev~iL~~l~H-pnI--------------  351 (558)
                      ....|++.+.||+|+||.||+|++.  ++.||||+++.... .....+.+.+|+.+++.++| +|.              
T Consensus        76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~  155 (413)
T 3dzo_A           76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD  155 (413)
T ss_dssp             CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred             CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence            3456889999999999999999986  88999999984432 22335779999999999987 221              


Q ss_pred             -------eEEEeeecC-----CCCceeEEEecCCCCHHHHHHhh------ccCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 008656          352 -------VQFIGACTK-----PPSLCIVTEFMSGGSVYDYLHKL------KGVFKLPSLLKVAIDVSKGMNYLHQNNIIH  413 (558)
Q Consensus       352 -------v~l~g~~~~-----~~~~~lV~E~~~ggsL~~~l~~~------~~~l~~~~~~~i~~qI~~aL~yLH~~gIiH  413 (558)
                             ..++.++..     ...++++|+++ +++|.+++...      ...+++..++.++.||+.||+|||++||+|
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiH  234 (413)
T 3dzo_A          156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVH  234 (413)
T ss_dssp             EEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             hcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence                   111111111     12357777777 78999998532      345788899999999999999999999999


Q ss_pred             ccCCCCcEEeCCCCcEEEEecCcceecccCCccccCCCCCCccchhhh----------cCCCCCchHHHHHHHHHHHHHH
Q 008656          414 RDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVI----------EHKPYDHKADVFSFGIVLWELL  483 (558)
Q Consensus       414 rDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~APEv~----------~~~~~s~ksDVwSlGilL~ell  483 (558)
                      |||||+|||++.++.+||+|||+++.....  .....| +.|+|||++          .+..|+.++|||||||++|+|+
T Consensus       235 rDiKp~NILl~~~~~~kL~DFG~a~~~~~~--~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ell  311 (413)
T 3dzo_A          235 TYLRPVDIVLDQRGGVFLTGFEHLVRDGAS--AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIW  311 (413)
T ss_dssp             SCCCGGGEEECTTCCEEECCGGGCEETTEE--ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHH
T ss_pred             CCcccceEEEecCCeEEEEeccceeecCCc--cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHH
Confidence            999999999999999999999999765443  455678 999999999          6667999999999999999999


Q ss_pred             cCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHH--HHHHHH
Q 008656          484 TGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEI--LQQIAK  548 (558)
Q Consensus       484 tG~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~ell~~--L~~l~~  548 (558)
                      +|+.||...+.......+.      .....+++.+.+||.+||+.||.+||++.++++.  ++++.+
T Consensus       312 tg~~Pf~~~~~~~~~~~~~------~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~~~~  372 (413)
T 3dzo_A          312 CADLPNTDDAALGGSEWIF------RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRT  372 (413)
T ss_dssp             HSSCCCCTTGGGSCSGGGG------SSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHHH
T ss_pred             HCCCCCCCcchhhhHHHHH------hhcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHHHHH
Confidence            9999998765433221111      1224678999999999999999999999888643  444433


No 247
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00  E-value=3e-39  Score=362.71  Aligned_cols=255  Identities=26%  Similarity=0.389  Sum_probs=206.0

Q ss_pred             CceeeeeeeeecCceEEEEEEE--CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecC------CCC
Q 008656          292 KHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTK------PPS  363 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~------~~~  363 (558)
                      ++|++.++||+|+||.||+|.+  .++.||||+++.. ........+.+|+.++++++||||+++++++..      ...
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~-~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~   92 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL   92 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC-CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence            5789999999999999999987  4788999998864 345556789999999999999999999998765      677


Q ss_pred             ceeEEEecCCCCHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCc---EEEEecCcce
Q 008656          364 LCIVTEFMSGGSVYDYLHKLKG--VFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV---VKVADFGVAR  438 (558)
Q Consensus       364 ~~lV~E~~~ggsL~~~l~~~~~--~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~---vkL~DFG~a~  438 (558)
                      .|+||||++|++|.+++.....  .+++..++.++.||+.||.|||++||+||||||+||+++.++.   +||+|||++.
T Consensus        93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~  172 (676)
T 3qa8_A           93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK  172 (676)
T ss_dssp             CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCC
T ss_pred             EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEccccccc
Confidence            8999999999999999976432  6899999999999999999999999999999999999997664   9999999998


Q ss_pred             ecccCCccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHH---------HH-hcC---
Q 008656          439 VKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVG---------VV-QKG---  505 (558)
Q Consensus       439 ~~~~~~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~---------v~-~~~---  505 (558)
                      ............||+.|+|||++.+..++.++||||||+++|+|++|..||...........         .. ...   
T Consensus       173 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g  252 (676)
T 3qa8_A          173 ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTG  252 (676)
T ss_dssp             BTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSS
T ss_pred             ccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhcc
Confidence            77666556667899999999999999999999999999999999999999976433221100         00 000   


Q ss_pred             ---C------CCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHH-----HHHHHHHH
Q 008656          506 ---L------RPTIPKNSQPKLAELLERCWQQDPALRPDFSEI-----IEILQQIA  547 (558)
Q Consensus       506 ---~------r~~ip~~~~~~l~~Ll~~cL~~dP~~RPs~~el-----l~~L~~l~  547 (558)
                         +      ...++..+++.+.+||.+||..||.+||++.++     .+.+++++
T Consensus       253 ~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL  308 (676)
T 3qa8_A          253 AVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSIL  308 (676)
T ss_dssp             SCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHH
T ss_pred             ccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHH
Confidence               0      011223467899999999999999999999884     45555544


No 248
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00  E-value=2.6e-38  Score=321.81  Aligned_cols=222  Identities=23%  Similarity=0.414  Sum_probs=181.0

Q ss_pred             Cceeee-eeeeecCceEEEEEEE--CCceEEEEEecCCCCChHHHHHHHHHHHHH-HhccCCCceEEEeeecC----CCC
Q 008656          292 KHLKFG-SKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIM-RKVRHKNVVQFIGACTK----PPS  363 (558)
Q Consensus       292 ~~~~i~-~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL-~~l~HpnIv~l~g~~~~----~~~  363 (558)
                      ++|.+. +.||+|+||.||++.+  +++.||||+++..       ..+.+|+.++ +.++||||+++++++..    ...
T Consensus        17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~   89 (299)
T 3m2w_A           17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKC   89 (299)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred             cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCce
Confidence            456666 7899999999999998  4788999999743       4567888887 66689999999998865    667


Q ss_pred             ceeEEEecCCCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCC---CCcEEEEecCccee
Q 008656          364 LCIVTEFMSGGSVYDYLHKLK-GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDE---NEVVKVADFGVARV  439 (558)
Q Consensus       364 ~~lV~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~---~~~vkL~DFG~a~~  439 (558)
                      +|+||||++|++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.   ++.+||+|||++..
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~  169 (299)
T 3m2w_A           90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE  169 (299)
T ss_dssp             EEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred             EEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccccccc
Confidence            899999999999999998743 36999999999999999999999999999999999999998   78899999999864


Q ss_pred             cccCCccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCC--CCCCC----CC
Q 008656          440 KAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGL--RPTIP----KN  513 (558)
Q Consensus       440 ~~~~~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~--r~~ip----~~  513 (558)
                      ..                     +..|+.++|||||||++|+|++|..||.................  ....+    ..
T Consensus       170 ~~---------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (299)
T 3m2w_A          170 TT---------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE  228 (299)
T ss_dssp             CT---------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHHTT
T ss_pred             cc---------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhccc
Confidence            32                     24578899999999999999999999987654432211111111  11222    56


Q ss_pred             CcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 008656          514 SQPKLAELLERCWQQDPALRPDFSEIIE  541 (558)
Q Consensus       514 ~~~~l~~Ll~~cL~~dP~~RPs~~ell~  541 (558)
                      +++++.+||.+||+.||.+||++.++++
T Consensus       229 ~~~~~~~li~~~l~~dP~~Rps~~e~l~  256 (299)
T 3m2w_A          229 VSEEVKMLIRNLLKTEPTQRMTITEFMN  256 (299)
T ss_dssp             SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            8899999999999999999999999985


No 249
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00  E-value=1.8e-38  Score=359.74  Aligned_cols=244  Identities=21%  Similarity=0.269  Sum_probs=201.5

Q ss_pred             CCCceeeeeeeeecCceEEEEEEEC---CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEeeecCCCC---
Q 008656          290 DPKHLKFGSKVASGSYGDLYRGTYC---SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS---  363 (558)
Q Consensus       290 ~~~~~~i~~~LG~GsfG~Vy~g~~~---~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~---  363 (558)
                      -.++|++.++||+|+||.||++.+.   ++.||||++... ........+.+|+.++++++||||+++++++...+.   
T Consensus        78 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~  156 (681)
T 2pzi_A           78 VAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS-GDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGD  156 (681)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS-CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSC
T ss_pred             eCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc-CCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCC
Confidence            3478999999999999999999984   688999998754 244556788999999999999999999999976655   


Q ss_pred             --ceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecc
Q 008656          364 --LCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKA  441 (558)
Q Consensus       364 --~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~  441 (558)
                        .||||||++|++|.+++..   .+++..++.++.||+.||.|||++||+||||||+|||++.+ .+||+|||+++...
T Consensus       157 ~~~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~  232 (681)
T 2pzi_A          157 PVGYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRIN  232 (681)
T ss_dssp             EEEEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCTTCEETT
T ss_pred             ceeEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecccchhcc
Confidence              6999999999999998754   79999999999999999999999999999999999999975 89999999998665


Q ss_pred             cCCccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCC-CCCCCcHHHHH
Q 008656          442 QSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPT-IPKNSQPKLAE  520 (558)
Q Consensus       442 ~~~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~-ip~~~~~~l~~  520 (558)
                      ..   ....||+.|+|||++.+.. +.++|||||||++|+|++|..||.....         ...... .....++.+.+
T Consensus       233 ~~---~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~---------~~~~~~~~~~~~~~~l~~  299 (681)
T 2pzi_A          233 SF---GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYV---------DGLPEDDPVLKTYDSYGR  299 (681)
T ss_dssp             CC---SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEEC---------SSCCTTCHHHHHCHHHHH
T ss_pred             cC---CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccc---------ccccccccccccCHHHHH
Confidence            43   4557999999999997664 8999999999999999999988864210         011100 00123578999


Q ss_pred             HHHHhhhcCCCCCC-CHHHHHHHHHHHHHHHH
Q 008656          521 LLERCWQQDPALRP-DFSEIIEILQQIAKEVY  551 (558)
Q Consensus       521 Ll~~cL~~dP~~RP-s~~ell~~L~~l~~~~~  551 (558)
                      ||.+||..||.+|| ++.++...|..++.++.
T Consensus       300 li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~~  331 (681)
T 2pzi_A          300 LLRRAIDPDPRQRFTTAEEMSAQLTGVLREVV  331 (681)
T ss_dssp             HHHHHTCSSGGGSCSSHHHHHHHHHHHHHHHH
T ss_pred             HHhhhccCChhhCCCHHHHHHHHHHHHHHHhh
Confidence            99999999999999 57778888888876653


No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00  E-value=1.1e-39  Score=337.24  Aligned_cols=240  Identities=16%  Similarity=0.243  Sum_probs=189.9

Q ss_pred             eCCCceeeeeeeeecCceEEEEEEECCceEEEEEecCCCC------ChHHHHHHHHHHHHHHhcc---------CCCceE
Q 008656          289 IDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERI------NSDMQKEFAQEVFIMRKVR---------HKNVVQ  353 (558)
Q Consensus       289 i~~~~~~i~~~LG~GsfG~Vy~g~~~~~~VAIKvlk~~~~------~~~~~~~~~~Ev~iL~~l~---------HpnIv~  353 (558)
                      +..++|++.++||+|+||.||+|+++++.||||+++....      .....+.+.+|+.+++.++         ||||++
T Consensus        17 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~   96 (336)
T 2vuw_A           17 LPTEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG   96 (336)
T ss_dssp             SCHHHHHTCEEEEEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred             cccccchheeeecccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence            4457899999999999999999999999999999986532      2233477889999999986         666666


Q ss_pred             EEee-----------------ec-------------CCCCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHH
Q 008656          354 FIGA-----------------CT-------------KPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGM  403 (558)
Q Consensus       354 l~g~-----------------~~-------------~~~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL  403 (558)
                      +.++                 +.             ....+||||||+++|++.+.+.+  +.+++..++.++.||+.||
T Consensus        97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL  174 (336)
T 2vuw_A           97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASL  174 (336)
T ss_dssp             EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHH
T ss_pred             hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHH
Confidence            6654                 32             26789999999999977766643  6689999999999999999


Q ss_pred             HHHH-HCCceeccCCCCcEEeCCCC--------------------cEEEEecCcceecccCCccccCCCCCCccchhhhc
Q 008656          404 NYLH-QNNIIHRDLKAANLLMDENE--------------------VVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIE  462 (558)
Q Consensus       404 ~yLH-~~gIiHrDLKp~NILl~~~~--------------------~vkL~DFG~a~~~~~~~~~~~~~gt~~y~APEv~~  462 (558)
                      +||| ++||+||||||+|||++.++                    .+||+|||+++.....    ...||+.|||||++.
T Consensus       175 ~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~----~~~gt~~y~aPE~~~  250 (336)
T 2vuw_A          175 AVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG----IVVFCDVSMDEDLFT  250 (336)
T ss_dssp             HHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT----EEECCCCTTCSGGGC
T ss_pred             HHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC----cEEEeecccChhhhc
Confidence            9999 99999999999999999887                    8999999999866543    347999999999999


Q ss_pred             CCCCCchHHHHHHHHH-HHHHHcCCCCCCCCCHHHHHH-HHHhcC-CCCC----CCCCCcHHHHHHHHHhhhcCCCCCCC
Q 008656          463 HKPYDHKADVFSFGIV-LWELLTGKLPYEYLTPLQAAV-GVVQKG-LRPT----IPKNSQPKLAELLERCWQQDPALRPD  535 (558)
Q Consensus       463 ~~~~s~ksDVwSlGil-L~elltG~~Pf~~~~~~~~~~-~v~~~~-~r~~----ip~~~~~~l~~Ll~~cL~~dP~~RPs  535 (558)
                      +.. +.++||||||++ .+++++|..||.......... .+.... ....    .+..+++++.+||.+||++|     |
T Consensus       251 g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----s  324 (336)
T 2vuw_A          251 GDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----S  324 (336)
T ss_dssp             CCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----S
T ss_pred             CCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----C
Confidence            877 999999998777 777888999985432211121 222111 1111    12346789999999999976     8


Q ss_pred             HHHHH
Q 008656          536 FSEII  540 (558)
Q Consensus       536 ~~ell  540 (558)
                      +.|++
T Consensus       325 a~e~l  329 (336)
T 2vuw_A          325 ATDLL  329 (336)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88887


No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.97  E-value=7.1e-32  Score=299.76  Aligned_cols=183  Identities=14%  Similarity=0.132  Sum_probs=132.0

Q ss_pred             eeeecCceEEEEE--EECCceEEEEEecCCCCC--------hHHHHHHHHHHHHHHhc-cCCCceEEEeeecCCCCceeE
Q 008656          299 KVASGSYGDLYRG--TYCSQDVAIKVLKPERIN--------SDMQKEFAQEVFIMRKV-RHKNVVQFIGACTKPPSLCIV  367 (558)
Q Consensus       299 ~LG~GsfG~Vy~g--~~~~~~VAIKvlk~~~~~--------~~~~~~~~~Ev~iL~~l-~HpnIv~l~g~~~~~~~~~lV  367 (558)
                      ..+.|++|.+..+  .+.|+.|++|++......        ....++|.+|+.+|+++ .|+||++++++++++..+|||
T Consensus       241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV  320 (569)
T 4azs_A          241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV  320 (569)
T ss_dssp             C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred             ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence            4566777766644  357999999999765321        12346799999999999 699999999999999999999


Q ss_pred             EEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccC-Ccc
Q 008656          368 TEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQS-GVM  446 (558)
Q Consensus       368 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~-~~~  446 (558)
                      |||++|++|.++|.. .+.++..   +|+.||+.||+|||++|||||||||+|||++.+|.+||+|||+|+..... ...
T Consensus       321 MEyv~G~~L~d~i~~-~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~~  396 (569)
T 4azs_A          321 MEKLPGRLLSDMLAA-GEEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWP  396 (569)
T ss_dssp             EECCCSEEHHHHHHT-TCCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---CCS
T ss_pred             EecCCCCcHHHHHHh-CCCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCCccc
Confidence            999999999999976 5666654   58899999999999999999999999999999999999999999866543 344


Q ss_pred             ccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCC
Q 008656          447 TAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGK  486 (558)
Q Consensus       447 ~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~  486 (558)
                      ...+||+.|||||++.+. +..++|+||+|+++++|.++.
T Consensus       397 ~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~  435 (569)
T 4azs_A          397 TNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPW  435 (569)
T ss_dssp             HHHHHHHHHHHHHHC------------------CCCCTTH
T ss_pred             cCceechhhccHHHhCCC-CCCcccccccccchhhhcccc
Confidence            566899999999999875 677899999999988776554


No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.95  E-value=1.4e-28  Score=271.53  Aligned_cols=184  Identities=20%  Similarity=0.251  Sum_probs=148.1

Q ss_pred             eeeeeeecCceEEEEEEECCceEEEEEecCCCCChH------HHHHHHHHHHHHHhccCCCceEEEeeecCCCCceeEEE
Q 008656          296 FGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSD------MQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTE  369 (558)
Q Consensus       296 i~~~LG~GsfG~Vy~g~~~~~~VAIKvlk~~~~~~~------~~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~~~~lV~E  369 (558)
                      ..+.||+|+||.||++++.++.+++|..........      ..+.+.+|+.+|++++||||+++..++......|||||
T Consensus       340 ~~~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE  419 (540)
T 3en9_A          340 PEHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS  419 (540)
T ss_dssp             --------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred             CCCEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence            356899999999999999999999998765443221      23558999999999999999954444445667799999


Q ss_pred             ecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcceecccCCc----
Q 008656          370 FMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGV----  445 (558)
Q Consensus       370 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~----  445 (558)
                      |++|++|.+++..         +..++.||+.||.|||++||+||||||+|||++.  .+||+|||+++.......    
T Consensus       420 ~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~~  488 (540)
T 3en9_A          420 YINGKLAKDVIED---------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAVD  488 (540)
T ss_dssp             CCCSEEHHHHSTT---------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHHH
T ss_pred             CCCCCCHHHHHHH---------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECCCccccccc
Confidence            9999999999865         5689999999999999999999999999999998  999999999987655321    


Q ss_pred             ----cccCCCCCCccchhhhcC--CCCCchHHHHHHHHHHHHHHcCCCCCC
Q 008656          446 ----MTAETGTYRWMAPEVIEH--KPYDHKADVFSFGIVLWELLTGKLPYE  490 (558)
Q Consensus       446 ----~~~~~gt~~y~APEv~~~--~~~s~ksDVwSlGilL~elltG~~Pf~  490 (558)
                          .....||+.|||||++..  ..|+..+|+|+..+-..+.+.++-+|.
T Consensus       489 ~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~  539 (540)
T 3en9_A          489 LIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV  539 (540)
T ss_dssp             HHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred             hhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence                135579999999999987  678889999999988888888777764


No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.90  E-value=2.3e-24  Score=218.67  Aligned_cols=146  Identities=14%  Similarity=0.140  Sum_probs=117.1

Q ss_pred             CceeeeeeeeecCceEEEEEEE-CCceEEEEEecCCCCCh----------------HHHHHHHHHHHHHHhccCCCceEE
Q 008656          292 KHLKFGSKVASGSYGDLYRGTY-CSQDVAIKVLKPERINS----------------DMQKEFAQEVFIMRKVRHKNVVQF  354 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~-~~~~VAIKvlk~~~~~~----------------~~~~~~~~Ev~iL~~l~HpnIv~l  354 (558)
                      ..|.+++.||+|+||.||+|.+ .++.||||+++......                .....+.+|+.+|++++|   +++
T Consensus        90 ~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~---~~v  166 (282)
T 1zar_A           90 KVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG---LAV  166 (282)
T ss_dssp             SCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT---SSS
T ss_pred             eEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC---CCc
Confidence            3467789999999999999998 47889999997543211                135678999999999995   444


Q ss_pred             EeeecCCCCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCCcEEEEec
Q 008656          355 IGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADF  434 (558)
Q Consensus       355 ~g~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DF  434 (558)
                      .+++.. +..|+||||++|++|.+ +.       ......++.||+.||.|||++||+||||||+|||++ ++.+||+||
T Consensus       167 ~~~~~~-~~~~lvmE~~~g~~L~~-l~-------~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~DF  236 (282)
T 1zar_A          167 PKVYAW-EGNAVLMELIDAKELYR-VR-------VENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIIDF  236 (282)
T ss_dssp             CCEEEE-ETTEEEEECCCCEEGGG-CC-------CSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECCC
T ss_pred             CeEEec-cceEEEEEecCCCcHHH-cc-------hhhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEEC
Confidence            444332 56799999999999988 42       234567999999999999999999999999999999 999999999


Q ss_pred             CcceecccCCccccCCCCCCccchhhhc
Q 008656          435 GVARVKAQSGVMTAETGTYRWMAPEVIE  462 (558)
Q Consensus       435 G~a~~~~~~~~~~~~~gt~~y~APEv~~  462 (558)
                      |+++.            +..++|||++.
T Consensus       237 G~a~~------------~~~~~a~e~l~  252 (282)
T 1zar_A          237 PQSVE------------VGEEGWREILE  252 (282)
T ss_dssp             TTCEE------------TTSTTHHHHHH
T ss_pred             CCCeE------------CCCCCHHHHHH
Confidence            99963            34578999874


No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.83  E-value=1.6e-20  Score=187.57  Aligned_cols=138  Identities=16%  Similarity=0.198  Sum_probs=109.5

Q ss_pred             ceeeeeeeeecCceEEEEEEE--CCce--EEEEEecCCCCCh----------------------HHHHHHHHHHHHHHhc
Q 008656          293 HLKFGSKVASGSYGDLYRGTY--CSQD--VAIKVLKPERINS----------------------DMQKEFAQEVFIMRKV  346 (558)
Q Consensus       293 ~~~i~~~LG~GsfG~Vy~g~~--~~~~--VAIKvlk~~~~~~----------------------~~~~~~~~Ev~iL~~l  346 (558)
                      -|.+.+.||+|+||.||+|.+  .|+.  ||||+++......                      .....+.+|+.+|+.+
T Consensus        48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l  127 (258)
T 1zth_A           48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA  127 (258)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred             chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence            367889999999999999998  7888  9999986542110                      1123688899999999


Q ss_pred             cCCCc--eEEEeeecCCCCceeEEEecCC-C----CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH-HCCceeccCCC
Q 008656          347 RHKNV--VQFIGACTKPPSLCIVTEFMSG-G----SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH-QNNIIHRDLKA  418 (558)
Q Consensus       347 ~HpnI--v~l~g~~~~~~~~~lV~E~~~g-g----sL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH-~~gIiHrDLKp  418 (558)
                      .|+++  +.++..    ...+|||||+.+ |    +|.++...    .++..+..++.||+.||.||| ++||+||||||
T Consensus       128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp  199 (258)
T 1zth_A          128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQEAELVHADLSE  199 (258)
T ss_dssp             HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCST
T ss_pred             HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCH
Confidence            98754  455543    357999999942 3    77766432    345678899999999999999 99999999999


Q ss_pred             CcEEeCCCCcEEEEecCcceec
Q 008656          419 ANLLMDENEVVKVADFGVARVK  440 (558)
Q Consensus       419 ~NILl~~~~~vkL~DFG~a~~~  440 (558)
                      +|||++.  .++|+|||+|...
T Consensus       200 ~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          200 YNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             TSEEESS--SEEECCCTTCEET
T ss_pred             HHEEEcC--cEEEEECcccccC
Confidence            9999998  8999999999654


No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.71  E-value=2.7e-18  Score=181.02  Aligned_cols=135  Identities=16%  Similarity=0.216  Sum_probs=99.8

Q ss_pred             eeeeeeeeecCceEEEEEEE-CCceEEEEEecCCCCC------------hHHH--------HHHHHHHHHHHhccCCCc-
Q 008656          294 LKFGSKVASGSYGDLYRGTY-CSQDVAIKVLKPERIN------------SDMQ--------KEFAQEVFIMRKVRHKNV-  351 (558)
Q Consensus       294 ~~i~~~LG~GsfG~Vy~g~~-~~~~VAIKvlk~~~~~------------~~~~--------~~~~~Ev~iL~~l~HpnI-  351 (558)
                      |+++.+||.|+||.||+|.. .|+.||||+++....+            ....        ....+|...|.++.+.++ 
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~  176 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP  176 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            78899999999999999986 5789999998753211            0000        112346666776654443 


Q ss_pred             -eEEEeeecCCCCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCCCC---
Q 008656          352 -VQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENE---  427 (558)
Q Consensus       352 -v~l~g~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~~~---  427 (558)
                       ...++.    ...+|||||++|++|.++.       ..+....++.||+.+|.|||++|||||||||.|||++++|   
T Consensus       177 vp~p~~~----~~~~LVME~i~G~~L~~l~-------~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~  245 (397)
T 4gyi_A          177 VPEPIAQ----SRHTIVMSLVDALPMRQVS-------SVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAE  245 (397)
T ss_dssp             CCCEEEE----ETTEEEEECCSCEEGGGCC-------CCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSS
T ss_pred             CCeeeec----cCceEEEEecCCccHhhhc-------ccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcc
Confidence             223322    1348999999998886543       2234567889999999999999999999999999998776   


Q ss_pred             -------cEEEEecCccee
Q 008656          428 -------VVKVADFGVARV  439 (558)
Q Consensus       428 -------~vkL~DFG~a~~  439 (558)
                             .+.|+||+.+..
T Consensus       246 d~~~~~~~~~iID~~Q~V~  264 (397)
T 4gyi_A          246 DPSSITLTPIIIXFPQMVS  264 (397)
T ss_dssp             CTTSEEEEEEECCCTTCEE
T ss_pred             cccccccceEEEEeCCccc
Confidence                   389999998754


No 256
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.37  E-value=1.2e-12  Score=129.52  Aligned_cols=139  Identities=12%  Similarity=0.084  Sum_probs=112.3

Q ss_pred             ceeeeeeeeecCceEEEEEEECCceEEEEEecCCCCChHHHHHHHHHHHHHHhcc-CCCceEEEeeecCCCCceeEEEec
Q 008656          293 HLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVR-HKNVVQFIGACTKPPSLCIVTEFM  371 (558)
Q Consensus       293 ~~~i~~~LG~GsfG~Vy~g~~~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~-HpnIv~l~g~~~~~~~~~lV~E~~  371 (558)
                      .|++...++.|+.+.||+....++.+++|+........  ...+.+|+.+++.+. +..++++++++...+..|+||||+
T Consensus        15 ~~~~~~~~~g~s~~~v~~~~~~~~~~vlK~~~~~~~~~--~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i   92 (263)
T 3tm0_A           15 KYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGT--TYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEA   92 (263)
T ss_dssp             TSEEEECCSCCSSSEEEEEECSSCEEEEEEECGGGTTS--TTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECC
T ss_pred             cceeEeeccCCCCCeEEEEECCCCcEEEEeCCcccCCC--HHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEec
Confidence            47777888889999999998888999999987532111  235888999999985 677889999988888899999999


Q ss_pred             CCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHH-------------------------------------------
Q 008656          372 SGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ-------------------------------------------  408 (558)
Q Consensus       372 ~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~-------------------------------------------  408 (558)
                      +|.+|.+.+.      +......++.++..+|..||+                                           
T Consensus        93 ~G~~l~~~~~------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (263)
T 3tm0_A           93 DGVLCSEEYE------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKD  166 (263)
T ss_dssp             SSEEHHHHCC------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSS
T ss_pred             CCeehhhccC------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCC
Confidence            9999987631      223345788999999999998                                           


Q ss_pred             ----------------CCceeccCCCCcEEeCCCCcEEEEecCccee
Q 008656          409 ----------------NNIIHRDLKAANLLMDENEVVKVADFGVARV  439 (558)
Q Consensus       409 ----------------~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~  439 (558)
                                      ..++|+|++|.||++++++.+.|+||+.+..
T Consensus       167 ~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T 3tm0_A          167 PRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             HHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             HHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence                            4589999999999998766677999998753


No 257
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.20  E-value=2.8e-11  Score=118.53  Aligned_cols=132  Identities=12%  Similarity=0.135  Sum_probs=97.4

Q ss_pred             eeeeeeeeecCceEEEEEEEC-CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCC--ceEEEeeecCCCCceeEEEe
Q 008656          294 LKFGSKVASGSYGDLYRGTYC-SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKN--VVQFIGACTKPPSLCIVTEF  370 (558)
Q Consensus       294 ~~i~~~LG~GsfG~Vy~g~~~-~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~Hpn--Iv~l~g~~~~~~~~~lV~E~  370 (558)
                      +.+....+.|+.+.||+.... ++.+++|+.....     ...+.+|+.+++.+.+.+  ++++++++..++..++||||
T Consensus        22 ~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~-----~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~   96 (264)
T 1nd4_A           22 YDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA-----LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGE   96 (264)
T ss_dssp             CEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCT-----TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEecccCCCCceEEEEecCCCCeEEEEeCCccc-----chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEe
Confidence            344333345667999999764 5679999977541     235778999999997544  56688888877788999999


Q ss_pred             cCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCC----------------------------------------
Q 008656          371 MSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN----------------------------------------  410 (558)
Q Consensus       371 ~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~g----------------------------------------  410 (558)
                      ++|.+|.  ...    ..   ...++.+++..|..||+..                                        
T Consensus        97 i~G~~l~--~~~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (264)
T 1nd4_A           97 VPGQDLL--SSH----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAP  167 (264)
T ss_dssp             CSSEETT--TSC----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCH
T ss_pred             cCCcccC--cCc----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccH
Confidence            9998884  211    11   2356677777777777643                                        


Q ss_pred             ------------------ceeccCCCCcEEeCCCCcEEEEecCccee
Q 008656          411 ------------------IIHRDLKAANLLMDENEVVKVADFGVARV  439 (558)
Q Consensus       411 ------------------IiHrDLKp~NILl~~~~~vkL~DFG~a~~  439 (558)
                                        ++|+|++|.||++++++.+.|+|||.+..
T Consensus       168 ~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~  214 (264)
T 1nd4_A          168 AELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV  214 (264)
T ss_dssp             HHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             HHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence                              99999999999998776677999998853


No 258
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.18  E-value=7.1e-11  Score=122.65  Aligned_cols=141  Identities=14%  Similarity=0.239  Sum_probs=107.9

Q ss_pred             eeeeeecCceEEEEEEECCceEEEEEec--CCCCChHHHHHHHHHHHHHHhcc--CCCceEEEeeecCC---CCceeEEE
Q 008656          297 GSKVASGSYGDLYRGTYCSQDVAIKVLK--PERINSDMQKEFAQEVFIMRKVR--HKNVVQFIGACTKP---PSLCIVTE  369 (558)
Q Consensus       297 ~~~LG~GsfG~Vy~g~~~~~~VAIKvlk--~~~~~~~~~~~~~~Ev~iL~~l~--HpnIv~l~g~~~~~---~~~~lV~E  369 (558)
                      .+.|+.|.++.||+.+..+..+++|+..  ..... .....+.+|+.+++.+.  +..+++++.++.+.   +..|+|||
T Consensus        43 ~~~l~~G~sn~~y~v~~~~~~~vlr~~~~p~~~~~-~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme  121 (359)
T 3dxp_A           43 VEQFKGGQSNPTFKLVTPGQTYVMRAKPGPKSKLL-PSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME  121 (359)
T ss_dssp             EEECCC-CCSCEEEEECSSCEEEEECCCC-----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred             EEEcCCcccceEEEEEECCceEEEEeCCCCCCCCC-CcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence            4678999999999999888889999876  33211 12346788999999997  45578899888766   45799999


Q ss_pred             ecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHH-----------------------------------------
Q 008656          370 FMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ-----------------------------------------  408 (558)
Q Consensus       370 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~-----------------------------------------  408 (558)
                      |++|..+.+..   ...++......++.+++..|..||+                                         
T Consensus       122 ~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (359)
T 3dxp_A          122 FVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMD  198 (359)
T ss_dssp             CCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHH
T ss_pred             ecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHH
Confidence            99998775421   2346777888899999999999997                                         


Q ss_pred             -----------------CCceeccCCCCcEEeCCCCc--EEEEecCcceecc
Q 008656          409 -----------------NNIIHRDLKAANLLMDENEV--VKVADFGVARVKA  441 (558)
Q Consensus       409 -----------------~gIiHrDLKp~NILl~~~~~--vkL~DFG~a~~~~  441 (558)
                                       ..++|+|+++.|||++.++.  +.|+||+.+....
T Consensus       199 ~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g~  250 (359)
T 3dxp_A          199 SLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLGH  250 (359)
T ss_dssp             HHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEEC
T ss_pred             HHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccCC
Confidence                             36899999999999997653  6999999987543


No 259
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=99.12  E-value=1.5e-10  Score=117.53  Aligned_cols=182  Identities=18%  Similarity=0.210  Sum_probs=124.0

Q ss_pred             eeeeecCceEEEEEEECCceEEEEEecCCCCChHHHHHHHHHHHHHHhcc-CCC--ceEEEeeecCCC---CceeEEEec
Q 008656          298 SKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVR-HKN--VVQFIGACTKPP---SLCIVTEFM  371 (558)
Q Consensus       298 ~~LG~GsfG~Vy~g~~~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~-Hpn--Iv~l~g~~~~~~---~~~lV~E~~  371 (558)
                      +.++.|.+..||+..   ..+++|+....    .....+.+|+.+|+.+. +..  +++++.......   ..|+||+++
T Consensus        26 ~~~~~G~~n~v~~v~---~~~vlR~~~~~----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i   98 (304)
T 3sg8_A           26 EISGEGNDCIAYEIN---RDFIFKFPKHS----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI   98 (304)
T ss_dssp             CEEEECSSEEEEEST---TSEEEEEESSH----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred             EecCCCCcceEEEEC---CEEEEEecCCc----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence            358999999999864   67999986532    34567889999999884 322  456666554433   348899999


Q ss_pred             CCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHH-------------------------------------------
Q 008656          372 SGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ-------------------------------------------  408 (558)
Q Consensus       372 ~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~-------------------------------------------  408 (558)
                      +|.+|.+...   ..++......++.+++..+..||+                                           
T Consensus        99 ~G~~l~~~~~---~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  175 (304)
T 3sg8_A           99 KGVPLTPLLL---NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDD  175 (304)
T ss_dssp             CCEECCHHHH---HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred             CCeECCcccc---ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHH
Confidence            9998875432   346777777888888888888885                                           


Q ss_pred             ---------------CCceeccCCCCcEEeCC--CCcEEEEecCcceecccCCccccCCCCCCccchhhhc----C-CCC
Q 008656          409 ---------------NNIIHRDLKAANLLMDE--NEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIE----H-KPY  466 (558)
Q Consensus       409 ---------------~gIiHrDLKp~NILl~~--~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~APEv~~----~-~~~  466 (558)
                                     ..++|+|++|.||++++  .+.+.|+||+.+.................-..|+...    . ...
T Consensus       176 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~  255 (304)
T 3sg8_A          176 FYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHK  255 (304)
T ss_dssp             HHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCS
T ss_pred             HHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCC
Confidence                           13799999999999998  5668899999987654321111110000002233221    0 111


Q ss_pred             ---------CchHHHHHHHHHHHHHHcCCCCC
Q 008656          467 ---------DHKADVFSFGIVLWELLTGKLPY  489 (558)
Q Consensus       467 ---------s~ksDVwSlGilL~elltG~~Pf  489 (558)
                               ..-.+.|+++.++|.+.+|..+|
T Consensus       256 ~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          256 DIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence                     12368999999999999998765


No 260
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.84  E-value=3.1e-08  Score=101.31  Aligned_cols=133  Identities=17%  Similarity=0.219  Sum_probs=101.0

Q ss_pred             eeeeeeecCceEEEEEEECCceEEEEEecCCCCChHHHHHHHHHHHHHHhccC----CCceEEEeeecCCCCceeEEEec
Q 008656          296 FGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRH----KNVVQFIGACTKPPSLCIVTEFM  371 (558)
Q Consensus       296 i~~~LG~GsfG~Vy~g~~~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~H----pnIv~l~g~~~~~~~~~lV~E~~  371 (558)
                      -.+.++.|....||+.   ++.+++|+....    .....+.+|..+|+.+.+    -.++++++.    +..++||||+
T Consensus        41 ~v~~l~~G~~n~vy~v---g~~~vlR~~~~~----~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i  109 (320)
T 3r70_A           41 ELRYLSSGDDSDTFLC---NEQYVVKVPKRD----SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYI  109 (320)
T ss_dssp             CEEEEEECSSEEEEEE---TTTEEEEEESSH----HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECC
T ss_pred             EEEeCCCCCCceEEEE---CCEEEEEeCCcH----HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeec
Confidence            3567899999999998   888999987532    224568899999999876    234566665    4679999999


Q ss_pred             CCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCC-----------------------------------------
Q 008656          372 SGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN-----------------------------------------  410 (558)
Q Consensus       372 ~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~g-----------------------------------------  410 (558)
                      +|.+|.+..   -..++......++.+++..+..||+..                                         
T Consensus       110 ~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (320)
T 3r70_A          110 KGERITYEQ---YHKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEML  186 (320)
T ss_dssp             CCBCCCHHH---HTTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred             CCccccccc---cccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccch
Confidence            999887433   123566666777777888777777432                                         


Q ss_pred             ----------------------ceeccCCCCcEEeCCCCcEEEEecCcceeccc
Q 008656          411 ----------------------IIHRDLKAANLLMDENEVVKVADFGVARVKAQ  442 (558)
Q Consensus       411 ----------------------IiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~  442 (558)
                                            ++|+|++|.||+++.++.+.|+||+.+.....
T Consensus       187 ~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~~  240 (320)
T 3r70_A          187 EHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGDP  240 (320)
T ss_dssp             HHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEECG
T ss_pred             HHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCCH
Confidence                                  39999999999999876679999999976554


No 261
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.64  E-value=4.3e-07  Score=92.36  Aligned_cols=135  Identities=16%  Similarity=0.161  Sum_probs=94.3

Q ss_pred             eeeeecCceEEEEEEECCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCC---CceEEEeeec-CCCCceeEEEecCC
Q 008656          298 SKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHK---NVVQFIGACT-KPPSLCIVTEFMSG  373 (558)
Q Consensus       298 ~~LG~GsfG~Vy~g~~~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~Hp---nIv~l~g~~~-~~~~~~lV~E~~~g  373 (558)
                      +.++.|....||+.   ++.+++|+...    ......+.+|..+|+.+.+.   .+++.+.++. ..+..++||||++|
T Consensus        25 ~~l~~G~~n~v~~v---g~~~VlR~~~~----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G   97 (306)
T 3tdw_A           25 ESLGEGFRNYAILV---NGDWVFRFPKS----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG   97 (306)
T ss_dssp             EEEEECSSEEEEEE---TTTEEEEEESS----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred             eecCCCcceeEEEE---CCEEEEEecCC----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence            45788999999987   78899998532    33456789999999999752   3566776663 44567899999999


Q ss_pred             CCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC--------------------------------------------
Q 008656          374 GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQN--------------------------------------------  409 (558)
Q Consensus       374 gsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~--------------------------------------------  409 (558)
                      .+|.+..-   ..++......++.++...|..||+.                                            
T Consensus        98 ~~l~~~~~---~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~  174 (306)
T 3tdw_A           98 QILGEDGM---AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTL  174 (306)
T ss_dssp             EECHHHHH---TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHH
T ss_pred             eECchhhh---hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHH
Confidence            88876321   1233334444444444444444432                                            


Q ss_pred             ----------------CceeccCCCCcEEeCC---CCc-EEEEecCcceeccc
Q 008656          410 ----------------NIIHRDLKAANLLMDE---NEV-VKVADFGVARVKAQ  442 (558)
Q Consensus       410 ----------------gIiHrDLKp~NILl~~---~~~-vkL~DFG~a~~~~~  442 (558)
                                      .++|+|++|.||+++.   ++. +.|+||+.+...+.
T Consensus       175 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~gd~  227 (306)
T 3tdw_A          175 RFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISDP  227 (306)
T ss_dssp             HHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEECG
T ss_pred             HHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCCCH
Confidence                            4599999999999987   344 58999998875543


No 262
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.54  E-value=4.5e-07  Score=94.61  Aligned_cols=74  Identities=7%  Similarity=0.104  Sum_probs=58.0

Q ss_pred             eeeeeecCceEEEEEEECCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCC--ceEEEeeecCC-CCceeEEEecCC
Q 008656          297 GSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKN--VVQFIGACTKP-PSLCIVTEFMSG  373 (558)
Q Consensus       297 ~~~LG~GsfG~Vy~g~~~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~Hpn--Iv~l~g~~~~~-~~~~lV~E~~~g  373 (558)
                      .+.|+.|....+|+.+..++.+++|+....       ..+..|+.+++.+....  +++++..+... +..|+||||++|
T Consensus        46 i~~l~gG~~n~~y~v~~~g~~~vlK~~~~~-------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G  118 (362)
T 3ovc_A           46 LMQLSEGEESRAFSFDVGGRGYVLRVNSCA-------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQG  118 (362)
T ss_dssp             EEEEEECSSEEEEEEEETTEEEEEEEESCC-------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCS
T ss_pred             EEECCCCCcceEEEEEECCcEEEEEeCCch-------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCC
Confidence            467899999999999988999999987643       25888999999987543  56677776554 568999999988


Q ss_pred             CCHH
Q 008656          374 GSVY  377 (558)
Q Consensus       374 gsL~  377 (558)
                      .+|.
T Consensus       119 ~~l~  122 (362)
T 3ovc_A          119 VTLQ  122 (362)
T ss_dssp             EETT
T ss_pred             CCcc
Confidence            6553


No 263
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.51  E-value=1.1e-06  Score=86.86  Aligned_cols=132  Identities=17%  Similarity=0.231  Sum_probs=95.9

Q ss_pred             eeeecCce-EEEEEEEC--CceEEEEEecCCCCChHHHHHHHHHHHHHHhcc-CCCceEEEeeecCCCCceeEEEecCCC
Q 008656          299 KVASGSYG-DLYRGTYC--SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVR-HKNVVQFIGACTKPPSLCIVTEFMSGG  374 (558)
Q Consensus       299 ~LG~GsfG-~Vy~g~~~--~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~-HpnIv~l~g~~~~~~~~~lV~E~~~gg  374 (558)
                      .+..|..| .||+....  +..+.+|+-...     ....+.+|..+|+.+. +--+++++.++..++..++|||+++|.
T Consensus        31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~-----~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~  105 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS-----VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGK  105 (272)
T ss_dssp             EEECSSSSCEEEEEECCTTCCCEEEEEEETH-----HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSE
T ss_pred             EccCCCcCCeEEEEEecCCCeEEEEEECCCC-----CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCc
Confidence            45556555 68987653  457999986632     3456888999999885 223678888888888899999999998


Q ss_pred             CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC---------------------------------------------
Q 008656          375 SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQN---------------------------------------------  409 (558)
Q Consensus       375 sL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~---------------------------------------------  409 (558)
                      ++.+....     .......++.++...|..||+.                                             
T Consensus       106 ~~~~~~~~-----~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (272)
T 4gkh_A          106 TAFQVLEE-----YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVW  180 (272)
T ss_dssp             EHHHHHHH-----CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHH
T ss_pred             cccccccC-----CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHH
Confidence            88876543     1223344556666666666631                                             


Q ss_pred             -------------CceeccCCCCcEEeCCCCcEEEEecCcceec
Q 008656          410 -------------NIIHRDLKAANLLMDENEVVKVADFGVARVK  440 (558)
Q Consensus       410 -------------gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~  440 (558)
                                   .++|+|+.+.|||++.++.+-|+||+.+...
T Consensus       181 ~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~g  224 (272)
T 4gkh_A          181 KEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIA  224 (272)
T ss_dssp             HHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEE
T ss_pred             HHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccccC
Confidence                         1699999999999998777789999988643


No 264
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.35  E-value=5.3e-07  Score=93.00  Aligned_cols=80  Identities=14%  Similarity=0.083  Sum_probs=56.2

Q ss_pred             eeeee-eecCceEEEEEEEC--------CceEEEEEecCCC---CChHHHHHHHHHHHHHHhccC---CCceEEEeeecC
Q 008656          296 FGSKV-ASGSYGDLYRGTYC--------SQDVAIKVLKPER---INSDMQKEFAQEVFIMRKVRH---KNVVQFIGACTK  360 (558)
Q Consensus       296 i~~~L-G~GsfG~Vy~g~~~--------~~~VAIKvlk~~~---~~~~~~~~~~~Ev~iL~~l~H---pnIv~l~g~~~~  360 (558)
                      ..+.| +.|....+|+.+..        ++.+++|+.....   ...  ...+.+|+.+++.+..   -.+++++.++..
T Consensus        24 ~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~--~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~  101 (357)
T 3ats_A           24 VESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFP--TYRLDHQFEVIRLVGELTDVPVPRVRWIETT  101 (357)
T ss_dssp             EEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSS--CCCHHHHHHHHHHHHHHCCSCCCCEEEEECS
T ss_pred             EEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCc--hhHHHHHHHHHHHHhhcCCCCCCcEEEEccC
Confidence            34677 78888999998765        6789999866432   100  1346778888888853   356778887765


Q ss_pred             C---CCceeEEEecCCCCHH
Q 008656          361 P---PSLCIVTEFMSGGSVY  377 (558)
Q Consensus       361 ~---~~~~lV~E~~~ggsL~  377 (558)
                      .   +..|+||||++|.++.
T Consensus       102 ~~~~g~~~~v~e~l~G~~l~  121 (357)
T 3ats_A          102 GDVLGTPFFLMDYVEGVVPP  121 (357)
T ss_dssp             STTTSSCEEEEECCCCBCCC
T ss_pred             CCccCCceEEEEecCCCChh
Confidence            5   3568999999886643


No 265
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.26  E-value=6.4e-06  Score=83.61  Aligned_cols=136  Identities=18%  Similarity=0.221  Sum_probs=80.8

Q ss_pred             eeeeecCceEEEEEEECCceEEEEEecCCCCChHHHHHHHHHHHHHHhccC--CCceEEEee------ecCCCCceeEEE
Q 008656          298 SKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRH--KNVVQFIGA------CTKPPSLCIVTE  369 (558)
Q Consensus       298 ~~LG~GsfG~Vy~g~~~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~H--pnIv~l~g~------~~~~~~~~lV~E  369 (558)
                      +.|+.|..+.||+....+..+++|+....   .   ..+..|..+++.|..  -.+++++..      ....+..+++|+
T Consensus        38 ~~l~gG~~n~~~~v~~~~~~~vlk~~~~~---~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~  111 (346)
T 2q83_A           38 DVIQGNQMALVWKVHTDSGAVCLKRIHRP---E---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD  111 (346)
T ss_dssp             EECC----CEEEEEEETTEEEEEEEECSC---H---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred             eeccccccCcEEEEEeCCCCEEEEecCCC---H---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence            45666788899999887777999998752   1   233455666665542  133444432      123456789999


Q ss_pred             ecCCCCHH-----------H---HHHhhccCC-------------CHHH-------------------------------
Q 008656          370 FMSGGSVY-----------D---YLHKLKGVF-------------KLPS-------------------------------  391 (558)
Q Consensus       370 ~~~ggsL~-----------~---~l~~~~~~l-------------~~~~-------------------------------  391 (558)
                      |++|.++.           .   .++.....+             .+..                               
T Consensus       112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  191 (346)
T 2q83_A          112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE  191 (346)
T ss_dssp             CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred             eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence            99986542           1   122211111             1100                               


Q ss_pred             HHHHHHHHHHHHHHHH-------------HCCceeccCCCCcEEeCCCCcEEEEecCccee
Q 008656          392 LLKVAIDVSKGMNYLH-------------QNNIIHRDLKAANLLMDENEVVKVADFGVARV  439 (558)
Q Consensus       392 ~~~i~~qI~~aL~yLH-------------~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~  439 (558)
                      +..+..++..++.+|+             ...++|+|+++.|||++.++.+.|+||+.+..
T Consensus       192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~  252 (346)
T 2q83_A          192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF  252 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred             HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence            0111122344566665             35799999999999998888999999998753


No 266
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.22  E-value=1.3e-05  Score=80.98  Aligned_cols=75  Identities=15%  Similarity=0.123  Sum_probs=58.5

Q ss_pred             eeeeeeecCceEEEEEEEC-CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCC---CceEEEeeecCCCCceeEEEec
Q 008656          296 FGSKVASGSYGDLYRGTYC-SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHK---NVVQFIGACTKPPSLCIVTEFM  371 (558)
Q Consensus       296 i~~~LG~GsfG~Vy~g~~~-~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~Hp---nIv~l~g~~~~~~~~~lV~E~~  371 (558)
                      -.+.|+.|.++.||+++.. |+.+++|+......  .....|..|+..|+.+.+.   .+++++++.    ..++||||+
T Consensus        19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~--~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l   92 (288)
T 3d1u_A           19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAP--ALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWV   92 (288)
T ss_dssp             EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCC--CCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECC
T ss_pred             ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCc--chhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEec
Confidence            3568999999999999875 67899999654321  1135688999999999865   578888764    369999999


Q ss_pred             CCCCH
Q 008656          372 SGGSV  376 (558)
Q Consensus       372 ~ggsL  376 (558)
                      +|+++
T Consensus        93 ~g~~~   97 (288)
T 3d1u_A           93 DERPP   97 (288)
T ss_dssp             CCCCC
T ss_pred             ccCCC
Confidence            99875


No 267
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.17  E-value=7.1e-06  Score=86.00  Aligned_cols=76  Identities=12%  Similarity=-0.017  Sum_probs=50.0

Q ss_pred             eeeeeecCceEEEEEEE--CCceEEEEEecCCCC--Ch---HHHHHHHHHHHHHHhccC--C-CceEEEeeecCCCCcee
Q 008656          297 GSKVASGSYGDLYRGTY--CSQDVAIKVLKPERI--NS---DMQKEFAQEVFIMRKVRH--K-NVVQFIGACTKPPSLCI  366 (558)
Q Consensus       297 ~~~LG~GsfG~Vy~g~~--~~~~VAIKvlk~~~~--~~---~~~~~~~~Ev~iL~~l~H--p-nIv~l~g~~~~~~~~~l  366 (558)
                      .+.||.|.++.||+++.  .++.++||.......  ..   .....+..|..+|+.+..  + .+++++.+.  ....++
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~~~~l  112 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVT  112 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEE
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CCccEE
Confidence            35789999999999954  467899998764211  00   112456778899888753  3 445666543  345689


Q ss_pred             EEEecCCC
Q 008656          367 VTEFMSGG  374 (558)
Q Consensus       367 V~E~~~gg  374 (558)
                      |||+++|.
T Consensus       113 vmE~l~g~  120 (397)
T 2olc_A          113 VMEDLSHL  120 (397)
T ss_dssp             EECCCTTS
T ss_pred             EEEeCCCc
Confidence            99999774


No 268
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.99  E-value=9.9e-06  Score=85.81  Aligned_cols=78  Identities=15%  Similarity=0.197  Sum_probs=50.8

Q ss_pred             HHCCceeccCCCCcEEeCCCCcEEEEecCcceecccCCccccCCC--CCCccchhhhcCCC---CCchHHHHHHHHHHHH
Q 008656          407 HQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETG--TYRWMAPEVIEHKP---YDHKADVFSFGIVLWE  481 (558)
Q Consensus       407 H~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~g--t~~y~APEv~~~~~---~s~ksDVwSlGilL~e  481 (558)
                      +...++|+|++|.|||++.++ ++|+||+.+..............  ...|++|+......   -.....+..+...+|+
T Consensus       230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (420)
T 2pyw_A          230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN  308 (420)
T ss_dssp             BCCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred             CCCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence            356799999999999999877 99999999876543211111111  23466766554221   1224566688888888


Q ss_pred             HHcC
Q 008656          482 LLTG  485 (558)
Q Consensus       482 lltG  485 (558)
                      .+++
T Consensus       309 ~y~~  312 (420)
T 2pyw_A          309 LFNK  312 (420)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7764


No 269
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=97.81  E-value=0.0002  Score=69.06  Aligned_cols=138  Identities=14%  Similarity=0.159  Sum_probs=97.8

Q ss_pred             CCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH-HCCceeccCCCCcEEeCCCCcEEEEecCcceecccCCccccCCCC
Q 008656          374 GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH-QNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGT  452 (558)
Q Consensus       374 gsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH-~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~gt  452 (558)
                      .||.+.|...+.++++.++|.++.|.+.+|.-+- ++.-..+=+.|..|++..+|.|.+.+ +.+.           ...
T Consensus        33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~-----------~~~  100 (229)
T 2yle_A           33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADD-----------AGE  100 (229)
T ss_dssp             EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C-----------------
T ss_pred             ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-cccc-----------ccc
Confidence            3899999999999999999999999999987762 22222444567899999999987664 1110           112


Q ss_pred             CCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhhhcC---
Q 008656          453 YRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELLERCWQQD---  529 (558)
Q Consensus       453 ~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~~~~~~~~~~~v~~~~~r~~ip~~~~~~l~~Ll~~cL~~d---  529 (558)
                      ..+.+||... ...+.+.=|||||++||..+-=                   ++.+..+..+++.|..||..|..-+   
T Consensus       101 ~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDy-------------------gL~e~eE~eLS~~LE~LL~~Mt~~~~d~  160 (229)
T 2yle_A          101 PPPVAGKLGY-SQCMETEVIESLGIIIYKALDY-------------------GLKENEERELSPPLEQLIDHMANTVEAD  160 (229)
T ss_dssp             ------CCSS-SSSCHHHHHHHHHHHHHHHHTT-------------------TCCTTEEECCCHHHHHHHHHHTTCCC--
T ss_pred             cCCCChhhcc-ccchHHHHHHHHHHHHHHHhhc-------------------CCCcccchhhCHHHHHHHHHHHhccccc
Confidence            3456788763 3456889999999999998752                   3334566788999999999998652   


Q ss_pred             ----------------------CCCCCCHHHHHHHH
Q 008656          530 ----------------------PALRPDFSEIIEIL  543 (558)
Q Consensus       530 ----------------------P~~RPs~~ell~~L  543 (558)
                                            +..|+++++|++.=
T Consensus       161 ~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~~C  196 (229)
T 2yle_A          161 GSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMKLC  196 (229)
T ss_dssp             ------------------CCSCCCCCCSHHHHHHHH
T ss_pred             ccccccccccccccccccccccccCcCCHHHHHHHH
Confidence                                  45788999988653


No 270
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.75  E-value=9.6e-05  Score=75.46  Aligned_cols=75  Identities=16%  Similarity=0.129  Sum_probs=61.2

Q ss_pred             eeeeeecCceEEEEEEECCceEEEEEecCCCCChHHHHHHHHHHHHHHhcc---CCCceEEEeeecCCCCceeEEEecCC
Q 008656          297 GSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVR---HKNVVQFIGACTKPPSLCIVTEFMSG  373 (558)
Q Consensus       297 ~~~LG~GsfG~Vy~g~~~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~---HpnIv~l~g~~~~~~~~~lV~E~~~g  373 (558)
                      .+.|+.|.+..+|+.+..+..+++|+....     ....+..|...|+.|.   ...+++++.++...+..++||||++|
T Consensus        41 ~~~l~gG~~n~~y~v~~~~~~~vlK~~~~~-----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G  115 (312)
T 3jr1_A           41 KEKLYSGEMNEIWLINDEVQTVFVKINERS-----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK  115 (312)
T ss_dssp             EEEECCSSSSEEEEEESSSCEEEEEEEEGG-----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred             eEEeCCccceeeeEEEECCCeEEEEeCCcc-----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence            457899999999999887888999987643     2466888999998885   25678888888777889999999998


Q ss_pred             CCH
Q 008656          374 GSV  376 (558)
Q Consensus       374 gsL  376 (558)
                      ..+
T Consensus       116 ~~~  118 (312)
T 3jr1_A          116 SKN  118 (312)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            764


No 271
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.60  E-value=0.0002  Score=72.96  Aligned_cols=137  Identities=15%  Similarity=0.115  Sum_probs=74.7

Q ss_pred             eeeecCceE-EEEEEEC-CceEEEEEecCCCCChHHHHHHHHHHHHHHhccC--CCceEEEeeecCCCCceeEEEecCCC
Q 008656          299 KVASGSYGD-LYRGTYC-SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRH--KNVVQFIGACTKPPSLCIVTEFMSGG  374 (558)
Q Consensus       299 ~LG~GsfG~-Vy~g~~~-~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~H--pnIv~l~g~~~~~~~~~lV~E~~~gg  374 (558)
                      .|+.|.... +|+.+.. ++.+++|.......     ..+..|+.+++.+..  -.+++++.+....+  +++||++.|.
T Consensus        25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~-----~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~   97 (333)
T 3csv_A           25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG-----GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDA   97 (333)
T ss_dssp             C--------CCEEEECTTCCEEEEEECCTTTT-----CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSC
T ss_pred             ECCCCCCCceEEEEEcCCCCeEEEEECCCCCC-----ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCc
Confidence            454454443 6676653 66777776543310     234456777777653  23566777654443  7899999877


Q ss_pred             CHHHHHHhhc-------------------------cCCCHHHHH-------H-H------------HHHHHHHHHHH---
Q 008656          375 SVYDYLHKLK-------------------------GVFKLPSLL-------K-V------------AIDVSKGMNYL---  406 (558)
Q Consensus       375 sL~~~l~~~~-------------------------~~l~~~~~~-------~-i------------~~qI~~aL~yL---  406 (558)
                      ++.+++....                         ..+......       . +            ...+...+..+   
T Consensus        98 ~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~  177 (333)
T 3csv_A           98 LFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSA  177 (333)
T ss_dssp             BHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred             chHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence            7765543210                         001111100       0 0            01111222333   


Q ss_pred             ---HHCCceeccCCCCcEEeCCC----CcEEEEecCcceeccc
Q 008656          407 ---HQNNIIHRDLKAANLLMDEN----EVVKVADFGVARVKAQ  442 (558)
Q Consensus       407 ---H~~gIiHrDLKp~NILl~~~----~~vkL~DFG~a~~~~~  442 (558)
                         +...++|+|+.+.||+++.+    +.+.|+||+.+.....
T Consensus       178 ~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~~  220 (333)
T 3csv_A          178 QLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGHR  220 (333)
T ss_dssp             HCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEECT
T ss_pred             cccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCCC
Confidence               13479999999999999874    6899999999876544


No 272
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.53  E-value=0.0008  Score=67.50  Aligned_cols=135  Identities=17%  Similarity=0.194  Sum_probs=77.6

Q ss_pred             eeeeeecCceEEEEEEECCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCc-eEEEeeecCCCCceeEEEec-CCC
Q 008656          297 GSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNV-VQFIGACTKPPSLCIVTEFM-SGG  374 (558)
Q Consensus       297 ~~~LG~GsfG~Vy~g~~~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnI-v~l~g~~~~~~~~~lV~E~~-~gg  374 (558)
                      .+.|+.|....+|+.    +.+++|+.......   .....+|+.+++.+...++ +++++.+.+  .-++++||+ +|.
T Consensus        23 i~~l~gG~tN~~~~~----~~~vlR~~~~~~~~---~~~r~~E~~~l~~l~~~g~~P~~~~~~~~--~~~~v~e~i~~g~   93 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA----GDLCLRIPGKGTEE---YINRANEAVAAREAAKAGVSPEVLHVDPA--TGVMVTRYIAGAQ   93 (301)
T ss_dssp             CEEEESCSSEEEEEE----TTEEEEEECC-------CCCHHHHHHHHHHHHHTTSSCCEEEECTT--TCCEEEECCTTCE
T ss_pred             eeEcCCcccccccee----eeEEEECCCCCccc---eeCHHHHHHHHHHHHHcCCCCceEEEECC--CCEEEEeecCCCc
Confidence            467889999999998    77999988753111   1123458888877753333 566665443  347899999 665


Q ss_pred             CHHHH------------------HHhhccCCC----H-HHHHHHHH--------------HHHHHHHHHH----H----C
Q 008656          375 SVYDY------------------LHKLKGVFK----L-PSLLKVAI--------------DVSKGMNYLH----Q----N  409 (558)
Q Consensus       375 sL~~~------------------l~~~~~~l~----~-~~~~~i~~--------------qI~~aL~yLH----~----~  409 (558)
                      +|...                  ++.....+.    . ..+..+..              .+...+..+.    .    .
T Consensus        94 ~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~  173 (301)
T 3dxq_A           94 TMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPL  173 (301)
T ss_dssp             ECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCC
T ss_pred             cCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCc
Confidence            54320                  111111111    0 11111111              1111122221    1    2


Q ss_pred             CceeccCCCCcEEeCCCCcEEEEecCcceecc
Q 008656          410 NIIHRDLKAANLLMDENEVVKVADFGVARVKA  441 (558)
Q Consensus       410 gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~  441 (558)
                      .++|+|+.+.||+ ..++.+.|+||..+....
T Consensus       174 ~l~HgDl~~~Nil-~~~~~~~lID~e~a~~g~  204 (301)
T 3dxq_A          174 AACHCDPLCENFL-DTGERMWIVDWEYSGMND  204 (301)
T ss_dssp             EEECSCCCGGGEE-ECSSCEEECCCTTCEEEC
T ss_pred             eeeccCCCcCCEE-ECCCCEEEEecccccCCC
Confidence            4899999999999 556678999999886543


No 273
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.46  E-value=0.00029  Score=71.09  Aligned_cols=140  Identities=14%  Similarity=0.143  Sum_probs=81.8

Q ss_pred             eeeeeeecCceEEEEEEECCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCC--ceEEEeee------cCCCCceeE
Q 008656          296 FGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKN--VVQFIGAC------TKPPSLCIV  367 (558)
Q Consensus       296 i~~~LG~GsfG~Vy~g~~~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~Hpn--Iv~l~g~~------~~~~~~~lV  367 (558)
                      -.+.|+.|....+|+.+..+..+++|+......    ...+..|+.+++.+...+  +++++...      ...+..+++
T Consensus        26 ~~~~i~~G~~n~~~~v~~~~g~~vlk~~~~~~~----~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l  101 (322)
T 2ppq_A           26 SYKGIAEGVENSNFLLHTTKDPLILTLYEKRVE----KNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAAL  101 (322)
T ss_dssp             EEEEECC---EEEEEEEESSCCEEEEEECC-------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEE
T ss_pred             EeeccCCCcccceEEEEeCCccEEEEEeCCCCC----HHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEE
Confidence            346778888899999988777899999875311    134556788887775322  33444321      112456899


Q ss_pred             EEecCCCCHH-----------HH---HHhhccCC--------CHHHHHH---------------HHHHHHHHHHHHHH--
Q 008656          368 TEFMSGGSVY-----------DY---LHKLKGVF--------KLPSLLK---------------VAIDVSKGMNYLHQ--  408 (558)
Q Consensus       368 ~E~~~ggsL~-----------~~---l~~~~~~l--------~~~~~~~---------------i~~qI~~aL~yLH~--  408 (558)
                      |+|++|..+.           ..   ++.....+        .......               +...+...++++..  
T Consensus       102 ~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~  181 (322)
T 2ppq_A          102 ISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHW  181 (322)
T ss_dssp             EECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHC
T ss_pred             EEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhC
Confidence            9999886531           11   22211111        1000000               00123445556653  


Q ss_pred             -----CCceeccCCCCcEEeCCCCcEEEEecCccee
Q 008656          409 -----NNIIHRDLKAANLLMDENEVVKVADFGVARV  439 (558)
Q Consensus       409 -----~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~  439 (558)
                           .+++|+|+++.|||+++++.+.|+||+.+..
T Consensus       182 ~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~  217 (322)
T 2ppq_A          182 PKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN  217 (322)
T ss_dssp             CCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             cccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence                 3699999999999999876668999998854


No 274
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.27  E-value=0.00086  Score=71.32  Aligned_cols=72  Identities=13%  Similarity=0.245  Sum_probs=50.1

Q ss_pred             eeeeeecCceEEEEEEEC---------CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCc-eEEEeeecCCCCcee
Q 008656          297 GSKVASGSYGDLYRGTYC---------SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNV-VQFIGACTKPPSLCI  366 (558)
Q Consensus       297 ~~~LG~GsfG~Vy~g~~~---------~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnI-v~l~g~~~~~~~~~l  366 (558)
                      .+.|+.|....+|+....         ++.+.+|+..... .   ...+..|..+++.+...++ +++++.+..    .+
T Consensus        78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~-~---~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~  149 (429)
T 1nw1_A           78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE-T---ESHLVAESVIFTLLSERHLGPKLYGIFSG----GR  149 (429)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC-C---HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EE
T ss_pred             EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC-c---HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CE
Confidence            357888888999999874         4679999985321 1   1344579999888864444 667776653    38


Q ss_pred             EEEecCCCCH
Q 008656          367 VTEFMSGGSV  376 (558)
Q Consensus       367 V~E~~~ggsL  376 (558)
                      |+||++|.+|
T Consensus       150 v~e~l~G~~l  159 (429)
T 1nw1_A          150 LEEYIPSRPL  159 (429)
T ss_dssp             EECCCCEEEC
T ss_pred             EEEEeCCccc
Confidence            9999987443


No 275
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.24  E-value=0.0023  Score=63.64  Aligned_cols=79  Identities=14%  Similarity=0.114  Sum_probs=56.8

Q ss_pred             CceeeeeeeeecCceEEEEEEEC-CceEEEEEecCCCCChHHHHHHHHHHHHHHhccC---CCceEEEeeecCCCCceeE
Q 008656          292 KHLKFGSKVASGSYGDLYRGTYC-SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRH---KNVVQFIGACTKPPSLCIV  367 (558)
Q Consensus       292 ~~~~i~~~LG~GsfG~Vy~g~~~-~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~H---pnIv~l~g~~~~~~~~~lV  367 (558)
                      .++.-.+.+|.|..+.||+.+.. |+.|.+|+........  ...|..|+..|+.|.-   --+++++++..    -++|
T Consensus        15 ~~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~--~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~~----~~lv   88 (288)
T 3f7w_A           15 REVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPAL--DGLFRAEALGLDWLGRSFGSPVPQVAGWDD----RTLA   88 (288)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCC--TTHHHHHHHHHHHHTCSTTCCSCCEEEEET----TEEE
T ss_pred             CCeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcch--hhHHHHHHHHHHHHHhhCCCCcceEEeccC----ceEE
Confidence            34556788999999999999974 6889999866443221  2457889999998852   23566666543    4899


Q ss_pred             EEecCCCCH
Q 008656          368 TEFMSGGSV  376 (558)
Q Consensus       368 ~E~~~ggsL  376 (558)
                      |||+.++..
T Consensus        89 ~e~l~~~~~   97 (288)
T 3f7w_A           89 MEWVDERPP   97 (288)
T ss_dssp             EECCCCCCC
T ss_pred             EEeecccCC
Confidence            999987653


No 276
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=97.04  E-value=0.0013  Score=67.92  Aligned_cols=72  Identities=13%  Similarity=0.180  Sum_probs=45.0

Q ss_pred             eeeeecCceEEEEEEECC----------ceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCC-ceEEEeeecCCCCcee
Q 008656          298 SKVASGSYGDLYRGTYCS----------QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKN-VVQFIGACTKPPSLCI  366 (558)
Q Consensus       298 ~~LG~GsfG~Vy~g~~~~----------~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~Hpn-Iv~l~g~~~~~~~~~l  366 (558)
                      +.|+.|..-.+|+....+          +.+++|+.....   ........|..+++.+...+ ++++++...    -++
T Consensus        39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~---~~~~~~~~E~~~l~~L~~~g~~P~~~~~~~----~~~  111 (369)
T 3c5i_A           39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV---DELYNTISEFEVYKTMSKYKIAPQLLNTFN----GGR  111 (369)
T ss_dssp             EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG---GGTSCHHHHHHHHHHHHHTTSSCCEEEEET----TEE
T ss_pred             EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc---cceecHHHHHHHHHHHHhcCCCCceEEecC----CcE
Confidence            567888888999998754          678899875431   11112356888888886434 456776552    378


Q ss_pred             EEEecCCCCH
Q 008656          367 VTEFMSGGSV  376 (558)
Q Consensus       367 V~E~~~ggsL  376 (558)
                      ||||++|.++
T Consensus       112 v~e~i~G~~l  121 (369)
T 3c5i_A          112 IEEWLYGDPL  121 (369)
T ss_dssp             EEECCCSEEC
T ss_pred             EEEEecCCcC
Confidence            9999988543


No 277
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.79  E-value=0.0038  Score=65.32  Aligned_cols=136  Identities=13%  Similarity=0.203  Sum_probs=80.9

Q ss_pred             eeeeecCceEEEEEEEC---------CceEEEEEecCCCCChHHHHHHHHHHHHHHhccC-CCceEEEeeecCCCCceeE
Q 008656          298 SKVASGSYGDLYRGTYC---------SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRH-KNVVQFIGACTKPPSLCIV  367 (558)
Q Consensus       298 ~~LG~GsfG~Vy~g~~~---------~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~H-pnIv~l~g~~~~~~~~~lV  367 (558)
                      +.|..|-...+|+.+..         ++.+.+|+.....   .....+.+|..+++.+.- .-.+++++.+..    .+|
T Consensus        56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~---~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v  128 (379)
T 3feg_A           56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL---QGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRL  128 (379)
T ss_dssp             EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEE
T ss_pred             EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc---chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccE
Confidence            45666777788888763         3678898853211   123455689999988853 223667777664    389


Q ss_pred             EEecCCCCHHH--------------HH---Hhhcc----CCC--HHHHHHHHHHHHH-------------------HHHH
Q 008656          368 TEFMSGGSVYD--------------YL---HKLKG----VFK--LPSLLKVAIDVSK-------------------GMNY  405 (558)
Q Consensus       368 ~E~~~ggsL~~--------------~l---~~~~~----~l~--~~~~~~i~~qI~~-------------------aL~y  405 (558)
                      |||++|.+|..              .|   +...-    ...  +.++.++..++-.                   .+..
T Consensus       129 ~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  208 (379)
T 3feg_A          129 EQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGN  208 (379)
T ss_dssp             EECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHH
T ss_pred             EEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHH
Confidence            99998865431              11   21111    111  2344445444322                   2333


Q ss_pred             HH----H----CCceeccCCCCcEEeCCC----CcEEEEecCcceec
Q 008656          406 LH----Q----NNIIHRDLKAANLLMDEN----EVVKVADFGVARVK  440 (558)
Q Consensus       406 LH----~----~gIiHrDLKp~NILl~~~----~~vkL~DFG~a~~~  440 (558)
                      |.    .    ..++|+|+.+.||+++.+    +.+.|+||..+...
T Consensus       209 L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~~  255 (379)
T 3feg_A          209 LRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSYN  255 (379)
T ss_dssp             HHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEEE
T ss_pred             HHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCcC
Confidence            33    2    258999999999999876    78999999988643


No 278
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.70  E-value=0.0079  Score=64.48  Aligned_cols=73  Identities=19%  Similarity=0.177  Sum_probs=48.9

Q ss_pred             eeeeeecCceEEEEEEECC--ceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCc-eEEEeeecCCCCceeEEEecCC
Q 008656          297 GSKVASGSYGDLYRGTYCS--QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNV-VQFIGACTKPPSLCIVTEFMSG  373 (558)
Q Consensus       297 ~~~LG~GsfG~Vy~g~~~~--~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnI-v~l~g~~~~~~~~~lV~E~~~g  373 (558)
                      .+.|+.|-...+|+....+  ..+++|+.....  ... ..-.+|..+++.|...++ +++++.+..    .+||||++|
T Consensus       113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~--~~~-idR~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I~G  185 (458)
T 2qg7_A          113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKT--DEI-INREREKKISCILYNKNIAKKIYVFFTN----GRIEEFMDG  185 (458)
T ss_dssp             EEEECC--CEEEEEEEETTTTEEEEEEEECC-C--CSC-SCHHHHHHHHHHHTTSSSBCCEEEEETT----EEEEECCCS
T ss_pred             EEEcCCCeEeEEEEEEECCCCceEEEEECCCCh--hhh-cCHHHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEeeCC
Confidence            3578888889999999876  789999875431  111 112578899998875544 567777742    369999987


Q ss_pred             CCH
Q 008656          374 GSV  376 (558)
Q Consensus       374 gsL  376 (558)
                      .+|
T Consensus       186 ~~l  188 (458)
T 2qg7_A          186 YAL  188 (458)
T ss_dssp             EEC
T ss_pred             ccC
Confidence            544


No 279
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.68  E-value=0.0084  Score=60.37  Aligned_cols=137  Identities=15%  Similarity=0.149  Sum_probs=78.7

Q ss_pred             eeeecCceEEEEEEEC-CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCC--ceEEEee-----ecCCCCceeEEEe
Q 008656          299 KVASGSYGDLYRGTYC-SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKN--VVQFIGA-----CTKPPSLCIVTEF  370 (558)
Q Consensus       299 ~LG~GsfG~Vy~g~~~-~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~Hpn--Iv~l~g~-----~~~~~~~~lV~E~  370 (558)
                      .|+ |....||+.... |+.+++|+.......   ...+..|..+++.+....  +++++..     ....+..+++|++
T Consensus        33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~---~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~  108 (328)
T 1zyl_A           33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERWT---ADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPS  108 (328)
T ss_dssp             EEC-CSSSEEEEECCTTCCCEEEEEECTTTSC---HHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEEC
T ss_pred             eec-CcccceEEEEcCCCCEEEEEEcCCCCCC---HHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEe
Confidence            455 777889988764 557999998754333   245666888888775322  3444443     0112345789999


Q ss_pred             cCCCCHH-----H------H---HHhhcc--------CCCHHHH----HHH---------------HHHHHHHHHHHH--
Q 008656          371 MSGGSVY-----D------Y---LHKLKG--------VFKLPSL----LKV---------------AIDVSKGMNYLH--  407 (558)
Q Consensus       371 ~~ggsL~-----~------~---l~~~~~--------~l~~~~~----~~i---------------~~qI~~aL~yLH--  407 (558)
                      ++|..+.     .      .   ++....        .+.....    ..+               ...+-..++.+.  
T Consensus       109 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~  188 (328)
T 1zyl_A          109 VGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAH  188 (328)
T ss_dssp             CCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence            9875432     1      1   121110        1111110    001               011111223332  


Q ss_pred             -----HCCceeccCCCCcEEeCCCCcEEEEecCcceecc
Q 008656          408 -----QNNIIHRDLKAANLLMDENEVVKVADFGVARVKA  441 (558)
Q Consensus       408 -----~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~~~~  441 (558)
                           ...++|+|+++.|||++ + .+.|+||+.+....
T Consensus       189 ~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~g~  225 (328)
T 1zyl_A          189 WREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARNGP  225 (328)
T ss_dssp             CCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCEEC
T ss_pred             hhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCcCc
Confidence                 24589999999999999 4 89999999886443


No 280
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.61  E-value=0.006  Score=62.50  Aligned_cols=68  Identities=15%  Similarity=0.065  Sum_probs=44.1

Q ss_pred             eecCceEEEEEEECCceEEEEEecCCCCChHHHHHHHHHHHHHHhccC---CCceEEEeee------cCCCCceeEEEec
Q 008656          301 ASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRH---KNVVQFIGAC------TKPPSLCIVTEFM  371 (558)
Q Consensus       301 G~GsfG~Vy~g~~~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~H---pnIv~l~g~~------~~~~~~~lV~E~~  371 (558)
                      |.|....||+....+..+++|+......        ..|+.+++.|..   +++++.+...      ...+..+++|+|+
T Consensus        32 G~g~~N~vy~v~~~~g~~vLK~~~~~~~--------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i  103 (339)
T 3i1a_A           32 GADTNAFAYQADSESKSYFIKLKYGYHD--------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFI  103 (339)
T ss_dssp             TSCSSCEEEEEECSSCEEEEEEEECSSC--------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECC
T ss_pred             cCccccceEEEEeCCCCEEEEEecCccc--------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEecc
Confidence            4444678999987656999998876542        345666666642   3355555431      2345678999999


Q ss_pred             CCCCH
Q 008656          372 SGGSV  376 (558)
Q Consensus       372 ~ggsL  376 (558)
                      +|..+
T Consensus       104 ~G~~~  108 (339)
T 3i1a_A          104 HAPNG  108 (339)
T ss_dssp             CCCBT
T ss_pred             CCCcC
Confidence            98765


No 281
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=96.38  E-value=0.0034  Score=59.05  Aligned_cols=64  Identities=17%  Similarity=0.277  Sum_probs=53.1

Q ss_pred             cceeeecCChhhHHHHHHHHHHhhccchhhccccccCCCceeeEEEEcCCChhhHHHHHHHHHHHH
Q 008656          180 HEITFSTDDKPKLLSQLTALLADIGLNIQEAHAFSTVDGYSLDVFVVDGWPYEETEQLRAALEKEV  245 (558)
Q Consensus       180 ~ei~~~~~d~~~~l~~l~~~~~~~~~~i~~a~~f~t~~g~~ldv~vv~~~~~~~~~~l~~~l~~~~  245 (558)
                      +.|++++.|+|+++++++.+|++.|+||.++..|.+.+++.+ .++|+. +....++++++|....
T Consensus         7 ~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~~~~f~~-~~~v~~-~~~~~~~l~~~L~~~~   70 (192)
T 1u8s_A            7 LVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTL-LMLISG-SPSNITRVETTLPLLG   70 (192)
T ss_dssp             EEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEE-EEEEEE-CHHHHHHHHHHHHHHH
T ss_pred             EEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeecCCceEE-EEEEec-CCCCHHHHHHHHHHHH
Confidence            579999999999999999999999999999999998888877 566654 2346677777777654


No 282
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.24  E-value=0.019  Score=60.51  Aligned_cols=138  Identities=14%  Similarity=0.191  Sum_probs=80.4

Q ss_pred             eeeeecCceEEEEEEECC---------ceEEEEEecCCCCC----------hHH------HHHHHHHHHHHHhccC-CCc
Q 008656          298 SKVASGSYGDLYRGTYCS---------QDVAIKVLKPERIN----------SDM------QKEFAQEVFIMRKVRH-KNV  351 (558)
Q Consensus       298 ~~LG~GsfG~Vy~g~~~~---------~~VAIKvlk~~~~~----------~~~------~~~~~~Ev~iL~~l~H-pnI  351 (558)
                      +.|..|-...+|+.+..+         ..|.+++.-.....          -+.      ......|..+++.+.. --.
T Consensus        58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~  137 (401)
T 3f2s_A           58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG  137 (401)
T ss_dssp             EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred             EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence            456667788899987642         56888886432100          000      0123358888888863 334


Q ss_pred             eEEEeeecCCCCceeEEEecCCCCHHH--------------HH---HhhccC----CC--HHHHHHHHHHHH--------
Q 008656          352 VQFIGACTKPPSLCIVTEFMSGGSVYD--------------YL---HKLKGV----FK--LPSLLKVAIDVS--------  400 (558)
Q Consensus       352 v~l~g~~~~~~~~~lV~E~~~ggsL~~--------------~l---~~~~~~----l~--~~~~~~i~~qI~--------  400 (558)
                      +++++.+..    .+|+||++|-+|..              .|   +...-+    ..  ...+.++..++.        
T Consensus       138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~  213 (401)
T 3f2s_A          138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES  213 (401)
T ss_dssp             CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred             CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence            678877754    28999998754421              11   111111    11  123333333221        


Q ss_pred             --------------HHHH----HHHHC----CceeccCCCCcEEeCCC------CcEEEEecCccee
Q 008656          401 --------------KGMN----YLHQN----NIIHRDLKAANLLMDEN------EVVKVADFGVARV  439 (558)
Q Consensus       401 --------------~aL~----yLH~~----gIiHrDLKp~NILl~~~------~~vkL~DFG~a~~  439 (558)
                                    .-+.    +|...    .++|+|+.+.||+++.+      +.+.|+||..+..
T Consensus       214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~  280 (401)
T 3f2s_A          214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred             hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence                          1222    23332    58999999999999876      7899999998853


No 283
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.73  E-value=0.023  Score=60.32  Aligned_cols=72  Identities=14%  Similarity=0.203  Sum_probs=47.5

Q ss_pred             eeeeecCceEEEEEEEC---------CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCC-ceEEEeeecCCCCceeE
Q 008656          298 SKVASGSYGDLYRGTYC---------SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKN-VVQFIGACTKPPSLCIV  367 (558)
Q Consensus       298 ~~LG~GsfG~Vy~g~~~---------~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~Hpn-Iv~l~g~~~~~~~~~lV  367 (558)
                      +.|..|-...+|+.+..         ++.+++|+.....   .......+|..+++.+.-.+ .+++++.+.    -++|
T Consensus        76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t---~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I  148 (424)
T 3mes_A           76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV---GKFYDSKVELDVFRYLSNINIAPNIIADFP----EGRI  148 (424)
T ss_dssp             EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC----CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEE
T ss_pred             EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc---chhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEE
Confidence            46677888889998876         5789999865421   11112356888888875322 456666443    3789


Q ss_pred             EEecCCCCH
Q 008656          368 TEFMSGGSV  376 (558)
Q Consensus       368 ~E~~~ggsL  376 (558)
                      |||++|.+|
T Consensus       149 ~efI~G~~l  157 (424)
T 3mes_A          149 EEFIDGEPL  157 (424)
T ss_dssp             EECCCSEEC
T ss_pred             EEEeCCccC
Confidence            999998653


No 284
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=95.53  E-value=0.0093  Score=56.34  Aligned_cols=47  Identities=11%  Similarity=0.298  Sum_probs=43.2

Q ss_pred             cceeeecCChhhHHHHHHHHHHhhccchhhccccccCCCceeeEEEEc
Q 008656          180 HEITFSTDDKPKLLSQLTALLADIGLNIQEAHAFSTVDGYSLDVFVVD  227 (558)
Q Consensus       180 ~ei~~~~~d~~~~l~~l~~~~~~~~~~i~~a~~f~t~~g~~ldv~vv~  227 (558)
                      ..|++++.|+|++.++++.+|++.|+||.+|..|.+.++|.+ .+.|+
T Consensus         6 ~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~~~~f~m-~~~v~   52 (195)
T 2nyi_A            6 FVVSVAGSDRVGIVHDFSWALKNISANVESSRMACLGGDFAM-IVLVS   52 (195)
T ss_dssp             EEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEE-EEEEE
T ss_pred             EEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEECCeEEE-EEEEE
Confidence            589999999999999999999999999999999999999999 55554


No 285
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=95.38  E-value=0.024  Score=46.07  Aligned_cols=67  Identities=22%  Similarity=0.219  Sum_probs=53.1

Q ss_pred             cceeeecCChhhHHHHHHHHHHhhccchhhccccccCCCceeeEEEEcCCChhhHHHHHHHHHHHHHH
Q 008656          180 HEITFSTDDKPKLLSQLTALLADIGLNIQEAHAFSTVDGYSLDVFVVDGWPYEETEQLRAALEKEVLK  247 (558)
Q Consensus       180 ~ei~~~~~d~~~~l~~l~~~~~~~~~~i~~a~~f~t~~g~~ldv~vv~~~~~~~~~~l~~~l~~~~~~  247 (558)
                      ..|++...|+|++|+.++.+|++.|.||.....+..- |...-.+.++.-.....+++.++|.+...+
T Consensus         6 ~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~-~~~~~~i~v~~~~~~~l~~l~~~L~~~~~~   72 (91)
T 1zpv_A            6 AIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLD-EYFTMMAVVSSDEKQDFTYLRNEFEAFGQT   72 (91)
T ss_dssp             EEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEET-TEEEEEEEEEESSCCCHHHHHHHHHHHHHH
T ss_pred             EEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEc-CEEEEEEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            5799999999999999999999999999998887664 665555566543355678888888765443


No 286
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.04  E-value=0.31  Score=50.84  Aligned_cols=30  Identities=23%  Similarity=0.462  Sum_probs=25.7

Q ss_pred             ceeccCCCCcEEe------CCCCcEEEEecCcceec
Q 008656          411 IIHRDLKAANLLM------DENEVVKVADFGVARVK  440 (558)
Q Consensus       411 IiHrDLKp~NILl------~~~~~vkL~DFG~a~~~  440 (558)
                      ++|+|+.+.|||+      ++++.+.++||..|...
T Consensus       246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~n  281 (401)
T 3g15_A          246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYN  281 (401)
T ss_dssp             EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEEE
T ss_pred             eEEecCCCCeEEEecCcccCcCCeEEEechHhccCC
Confidence            6899999999999      45678999999988643


No 287
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=93.67  E-value=0.062  Score=43.05  Aligned_cols=62  Identities=16%  Similarity=0.147  Sum_probs=44.2

Q ss_pred             ccceeeecCChhhHHHHHHHHHHhhccchhhccccccCCCceeeEEEEcCCChhhHHHHHHHH
Q 008656          179 MHEITFSTDDKPKLLSQLTALLADIGLNIQEAHAFSTVDGYSLDVFVVDGWPYEETEQLRAAL  241 (558)
Q Consensus       179 ~~ei~~~~~d~~~~l~~l~~~~~~~~~~i~~a~~f~t~~g~~ldv~vv~~~~~~~~~~l~~~l  241 (558)
                      ...|.+...|+|++|.++++++++.|.||......... +...-++.++.-..+..+++.++|
T Consensus         5 ~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~-~~~~~~i~v~~~~~~~l~~l~~~L   66 (88)
T 2ko1_A            5 LAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKD-GIFTCNLMIFVKNTDKLTTLMDKL   66 (88)
T ss_dssp             EEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEECS-SEEEEEEEEEESSHHHHHHHHHHH
T ss_pred             EEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEcC-CEEEEEEEEEECCHHHHHHHHHHH
Confidence            34788899999999999999999999999987776543 344444555544444444444444


No 288
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=91.71  E-value=0.28  Score=44.94  Aligned_cols=63  Identities=21%  Similarity=0.187  Sum_probs=51.0

Q ss_pred             cceeeecCChhhHHHHHHHHHHhhccchhhccccccCC-CceeeEEEEcCCChhhHHHHHHHHHH
Q 008656          180 HEITFSTDDKPKLLSQLTALLADIGLNIQEAHAFSTVD-GYSLDVFVVDGWPYEETEQLRAALEK  243 (558)
Q Consensus       180 ~ei~~~~~d~~~~l~~l~~~~~~~~~~i~~a~~f~t~~-g~~ldv~vv~~~~~~~~~~l~~~l~~  243 (558)
                      |.|.+-..|+|++|++++.++++-|.||.-..+..|-+ |.+-=.|+|+ ...+..+++..++.+
T Consensus         4 ~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~-~d~~~leqI~kqL~K   67 (164)
T 2f1f_A            4 RILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTV-GDEKVLEQIEKQLHK   67 (164)
T ss_dssp             EEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEE-SCHHHHHHHHHHHHH
T ss_pred             EEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEe-ccHHHHHHHHHHHcC
Confidence            78888899999999999999999999999988887775 7777778888 344555556555543


No 289
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=91.05  E-value=0.23  Score=46.63  Aligned_cols=68  Identities=19%  Similarity=0.101  Sum_probs=47.9

Q ss_pred             ccceeeecCChhhHHHHHHHHHHhhccchhhccccccC------CCceeeEEEEcCCChhhHHHHHHHHHHHHHHH
Q 008656          179 MHEITFSTDDKPKLLSQLTALLADIGLNIQEAHAFSTV------DGYSLDVFVVDGWPYEETEQLRAALEKEVLKL  248 (558)
Q Consensus       179 ~~ei~~~~~d~~~~l~~l~~~~~~~~~~i~~a~~f~t~------~g~~ldv~vv~~~~~~~~~~l~~~l~~~~~~~  248 (558)
                      -+-|++++.|+|+++..++.+|++.|+||.++..|..-      +-|.+.+ .++.-.... ++|+++|.....++
T Consensus        93 ~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~-~~~~~~~~~-~~l~~~l~~~a~~l  166 (195)
T 2nyi_A           93 EYELYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGS-RVAFPFPLY-QEVVTALSRVEEEF  166 (195)
T ss_dssp             EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEE-EEEEEGGGH-HHHHHHHHHHHHHH
T ss_pred             EEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeeecccccCCCCeEEEEE-EEEcCCCcc-HHHHHHHHHHHHHc
Confidence            46799999999999999999999999999999998543      2222222 122112334 77888887655443


No 290
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=89.57  E-value=0.52  Score=43.20  Aligned_cols=63  Identities=29%  Similarity=0.357  Sum_probs=49.7

Q ss_pred             cceeeecCChhhHHHHHHHHHHhhccchhhccccccCC-CceeeEEEEcCCChhhHHHHHHHHHH
Q 008656          180 HEITFSTDDKPKLLSQLTALLADIGLNIQEAHAFSTVD-GYSLDVFVVDGWPYEETEQLRAALEK  243 (558)
Q Consensus       180 ~ei~~~~~d~~~~l~~l~~~~~~~~~~i~~a~~f~t~~-g~~ldv~vv~~~~~~~~~~l~~~l~~  243 (558)
                      |.|.+-..|+|+.|++++.++++-|.||.-..+..|-+ |.+-=.++|+ ......+++..++.+
T Consensus         5 ~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~-~d~~~leql~kQL~K   68 (165)
T 2pc6_A            5 HIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTN-GPDEIVEQITKQLNK   68 (165)
T ss_dssp             EEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEE-ECHHHHHHHHHHHHH
T ss_pred             EEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEe-ccHHHHHHHHHHhcC
Confidence            68888889999999999999999999999988887774 7777777887 334455555555543


No 291
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=88.83  E-value=0.031  Score=59.95  Aligned_cols=59  Identities=8%  Similarity=0.051  Sum_probs=15.8

Q ss_pred             eeeeeeecCceEEEEEEECC--ceEEE------EEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEee
Q 008656          296 FGSKVASGSYGDLYRGTYCS--QDVAI------KVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA  357 (558)
Q Consensus       296 i~~~LG~GsfG~Vy~g~~~~--~~VAI------Kvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~  357 (558)
                      +.++||   ||.||+|.+.+  .+||+      |..+......+....|.+|..+++.++|||+++.+++
T Consensus       146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f  212 (463)
T 3cxl_A          146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNF  212 (463)
T ss_dssp             STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCE
T ss_pred             ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcce
Confidence            345666   99999999875  47888      7776555555556778999999999999999998775


No 292
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=88.56  E-value=0.62  Score=43.27  Aligned_cols=69  Identities=14%  Similarity=0.057  Sum_probs=48.8

Q ss_pred             ccceeeecCChhhHHHHHHHHHHhhccchhhccccccC-------CCceeeEEEEcCCChhhHHHHHHHHHHHHHH
Q 008656          179 MHEITFSTDDKPKLLSQLTALLADIGLNIQEAHAFSTV-------DGYSLDVFVVDGWPYEETEQLRAALEKEVLK  247 (558)
Q Consensus       179 ~~ei~~~~~d~~~~l~~l~~~~~~~~~~i~~a~~f~t~-------~g~~ldv~vv~~~~~~~~~~l~~~l~~~~~~  247 (558)
                      .+-|++.+.|+|+++..++.+|++.|+||.++..|..-       .+...-.+.++.-...+.++|+++|.....+
T Consensus        93 ~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~~~~~~~~~~~~~l~~~l~~~~~~  168 (192)
T 1u8s_A           93 TVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAISARVDSGCNLMQLQEEFDALCTA  168 (192)
T ss_dssp             EEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEEEEEECTTSCHHHHHHHHHHHHHH
T ss_pred             eEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCCCCEEEEEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence            56799999999999999999999999999999988543       1111111222221233577888888865544


No 293
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=84.75  E-value=0.88  Score=45.45  Aligned_cols=65  Identities=20%  Similarity=0.258  Sum_probs=49.1

Q ss_pred             cceeeecCChhhHHHHHHHHHHhhccchhhccccccC-CCceeeEEEEcCCCh--hhHHHHHHHHHHHH
Q 008656          180 HEITFSTDDKPKLLSQLTALLADIGLNIQEAHAFSTV-DGYSLDVFVVDGWPY--EETEQLRAALEKEV  245 (558)
Q Consensus       180 ~ei~~~~~d~~~~l~~l~~~~~~~~~~i~~a~~f~t~-~g~~ldv~vv~~~~~--~~~~~l~~~l~~~~  245 (558)
                      +-+|+++.|+|++..++|..|++.|.||.+...|.+. .|...=...++ ++.  ...++|+++|+..-
T Consensus         7 ~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~-~~~~~~~~~~L~~~f~~la   74 (288)
T 3obi_A            7 YVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFN-AAAKVIPLASLRTGFGVIA   74 (288)
T ss_dssp             EEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEE-ESSCCCCHHHHHHHHHHHH
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEE-cCCCCCCHHHHHHHHHHHH
Confidence            4599999999999999999999999999999999543 55444333443 333  35778888887543


No 294
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=83.97  E-value=0.79  Score=45.77  Aligned_cols=63  Identities=22%  Similarity=0.347  Sum_probs=45.0

Q ss_pred             cceeeecCChhhHHHHHHHHHHhhccchhhccccccC-CCceeeEEEEcCCChhhHHHHHHHHHH
Q 008656          180 HEITFSTDDKPKLLSQLTALLADIGLNIQEAHAFSTV-DGYSLDVFVVDGWPYEETEQLRAALEK  243 (558)
Q Consensus       180 ~ei~~~~~d~~~~l~~l~~~~~~~~~~i~~a~~f~t~-~g~~ldv~vv~~~~~~~~~~l~~~l~~  243 (558)
                      +=+|+++.|+|++...+|..|++.|.||.+...|.+. .|+..=...++. +....++|+++|+.
T Consensus         8 ~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~-~~~~~~~L~~~f~~   71 (287)
T 3nrb_A            8 YVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFFMRVSVEI-PVAGVNDFNSAFGK   71 (287)
T ss_dssp             EEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEEC-CC---CHHHHHHHH
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCeEEEEEEEEc-CCCCHHHHHHHHHH
Confidence            3589999999999999999999999999999999543 554443333433 32234467777654


No 295
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=82.06  E-value=1.6  Score=43.46  Aligned_cols=65  Identities=15%  Similarity=0.081  Sum_probs=47.6

Q ss_pred             cceeeecCChhhHHHHHHHHHHhhccchhhcccccc-CCCceeeEEEEcCCChhhHHHHHHHHHHH
Q 008656          180 HEITFSTDDKPKLLSQLTALLADIGLNIQEAHAFST-VDGYSLDVFVVDGWPYEETEQLRAALEKE  244 (558)
Q Consensus       180 ~ei~~~~~d~~~~l~~l~~~~~~~~~~i~~a~~f~t-~~g~~ldv~vv~~~~~~~~~~l~~~l~~~  244 (558)
                      +-+|+++.|+|++..++|..|++.|.||.+...|.. ..|...=...++.-...+.++|+++|+..
T Consensus         9 ~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~~~~L~~~f~~l   74 (286)
T 3n0v_A            9 WILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFRQPDDFDEAGFRAGLAER   74 (286)
T ss_dssp             EEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCSSCCHHHHHHHHHHH
T ss_pred             EEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEEEEEEecCCCCCHHHHHHHHHHH
Confidence            469999999999999999999999999999999942 23443333344421123567788877653


No 296
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=81.86  E-value=1.9  Score=43.26  Aligned_cols=66  Identities=15%  Similarity=0.178  Sum_probs=49.2

Q ss_pred             cceeeecCChhhHHHHHHHHHHhhccchhhcccccc-CCCceeeEEEEcCCCh--hhHHHHHHHHHHHHH
Q 008656          180 HEITFSTDDKPKLLSQLTALLADIGLNIQEAHAFST-VDGYSLDVFVVDGWPY--EETEQLRAALEKEVL  246 (558)
Q Consensus       180 ~ei~~~~~d~~~~l~~l~~~~~~~~~~i~~a~~f~t-~~g~~ldv~vv~~~~~--~~~~~l~~~l~~~~~  246 (558)
                      +=+|+++.|+|++...+|..|++.|.||.+...|.. ..|+..=...++ ++.  ...++|+++|+..-.
T Consensus        23 ~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~-~~~~~~~~~~L~~~l~~la~   91 (302)
T 3o1l_A           23 FRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIR-ADTLPFDLDGFREAFTPIAE   91 (302)
T ss_dssp             EEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEE-GGGSSSCHHHHHHHHHHHHH
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEe-cCCCCCCHHHHHHHHHHHHH
Confidence            359999999999999999999999999999999853 245444444444 332  356788888865433


No 297
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=80.19  E-value=1.1  Score=46.75  Aligned_cols=65  Identities=20%  Similarity=0.245  Sum_probs=46.7

Q ss_pred             ceeeecCChhhHHHHHHHHHHhhccchhhccccccCCCceeeEEEEcC-CChhhHHHHHHHHHHHHH
Q 008656          181 EITFSTDDKPKLLSQLTALLADIGLNIQEAHAFSTVDGYSLDVFVVDG-WPYEETEQLRAALEKEVL  246 (558)
Q Consensus       181 ei~~~~~d~~~~l~~l~~~~~~~~~~i~~a~~f~t~~g~~ldv~vv~~-~~~~~~~~l~~~l~~~~~  246 (558)
                      =||+++.|+|++.+.++.+|++.|.||.+...+....-|++-+ .|+. +.....++|+++|...-.
T Consensus        14 ~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~~~~f~~~~-~~~~~~~~~~~~~l~~~l~~~~~   79 (415)
T 3p96_A           14 LITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVIRHRLTLGV-LVCCPADVADGPALRHDVEAAIR   79 (415)
T ss_dssp             EEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEETTEEEEEE-EEEECHHHHTSHHHHHHHHHHHH
T ss_pred             EEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEECCEeEEEE-EEEecCCcCCHHHHHHHHHHHHH
Confidence            5999999999999999999999999999999886443333333 3332 211134778888875433


No 298
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=80.08  E-value=1.9  Score=43.14  Aligned_cols=67  Identities=15%  Similarity=0.128  Sum_probs=48.0

Q ss_pred             cceeeecCChhhHHHHHHHHHHhhccchhhccccc-cCCCceeeEEEEcCC--C-hhhHHHHHHHHHHHHH
Q 008656          180 HEITFSTDDKPKLLSQLTALLADIGLNIQEAHAFS-TVDGYSLDVFVVDGW--P-YEETEQLRAALEKEVL  246 (558)
Q Consensus       180 ~ei~~~~~d~~~~l~~l~~~~~~~~~~i~~a~~f~-t~~g~~ldv~vv~~~--~-~~~~~~l~~~l~~~~~  246 (558)
                      +-+|+++.|+|++..++|..|++-|.||.+...|. ...|...=...++.-  . ..+.++|+++|+..-.
T Consensus        11 ~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~~~~~~~L~~~f~~la~   81 (292)
T 3lou_A           11 FVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFFVRCVFHATDDADALRVDALRREFEPIAE   81 (292)
T ss_dssp             EEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEECC----CCHHHHHHHHHHHHH
T ss_pred             EEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCCceEEEEEEEccCcccCCCHHHHHHHHHHHHH
Confidence            45999999999999999999999999999999994 234443333334332  1 2346778888865433


No 299
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=77.18  E-value=2  Score=40.18  Aligned_cols=62  Identities=24%  Similarity=0.326  Sum_probs=48.2

Q ss_pred             cceeeecCChhhHHHHHHHHHHhhccchhhccccccCC-CceeeEEEEcCCChhhHHHHHHHHH
Q 008656          180 HEITFSTDDKPKLLSQLTALLADIGLNIQEAHAFSTVD-GYSLDVFVVDGWPYEETEQLRAALE  242 (558)
Q Consensus       180 ~ei~~~~~d~~~~l~~l~~~~~~~~~~i~~a~~f~t~~-g~~ldv~vv~~~~~~~~~~l~~~l~  242 (558)
                      |-|++-..|+|+.|++++.++++-|+||.--.+..|-+ |.+-=+++|++- ....+++..++.
T Consensus        30 ~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~-e~~ieqL~kQL~   92 (193)
T 2fgc_A           30 HLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGD-DKTIEQIEKQAY   92 (193)
T ss_dssp             EEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEEC-TTHHHHHHHHHT
T ss_pred             EEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECC-HHHHHHHHHHhc
Confidence            78888889999999999999999999999877877766 666666778754 334555555544


No 300
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=76.12  E-value=4.5  Score=38.53  Aligned_cols=115  Identities=10%  Similarity=0.098  Sum_probs=75.0

Q ss_pred             cCCCceEEEeeecCCCCceeEEEecCCC-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEeCC
Q 008656          347 RHKNVVQFIGACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDE  425 (558)
Q Consensus       347 ~HpnIv~l~g~~~~~~~~~lV~E~~~gg-sL~~~l~~~~~~l~~~~~~~i~~qI~~aL~yLH~~gIiHrDLKp~NILl~~  425 (558)
                      .||+++.. .+-...+.+.|.++.-+.+ ++.. +    ..++....++++.+|+....+++  .-+|--|.|+||+++.
T Consensus        43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-i----k~~~~~eKlr~l~ni~~l~~~~~--~r~tf~L~P~NL~f~~  114 (215)
T 4ann_A           43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-I----KSFTKNEKLRYLLNIKNLEEVNR--TRYTFVLAPDELFFTR  114 (215)
T ss_dssp             CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-G----GGSCHHHHHHHHHHGGGGGGGGG--SSEECCCSGGGEEECT
T ss_pred             cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-H----HhcCHHHHHHHHHHHHHHHHHhc--CceEEEEecceEEEcC
Confidence            57888865 3444445555544443322 2222 3    23688889999999988774443  3477889999999999


Q ss_pred             CCcEEEEecCcceecccCCccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCC
Q 008656          426 NEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYE  490 (558)
Q Consensus       426 ~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~  490 (558)
                      ++.+++.=-|+-...                +|     ..++...=+-.+=|++..+++++..|.
T Consensus       115 ~~~p~i~~RGik~~l----------------~P-----~~~~ee~fL~qyKAliiall~~K~~Fe  158 (215)
T 4ann_A          115 DGLPIAKTRGLQNVV----------------DP-----LPVSEAEFLTRYKALVICAFNEKQSFD  158 (215)
T ss_dssp             TSCEEESCCEETTTB----------------SC-----CCCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred             CCCEEEEEccCccCC----------------CC-----CCCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence            999999877754211                11     123333344457889999999988874


No 301
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=71.25  E-value=23  Score=35.96  Aligned_cols=144  Identities=13%  Similarity=0.116  Sum_probs=79.0

Q ss_pred             eeeCCCc---eeeeeeeeecCceEEEEEEECCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCceEEEee------
Q 008656          287 WEIDPKH---LKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA------  357 (558)
Q Consensus       287 ~~i~~~~---~~i~~~LG~GsfG~Vy~g~~~~~~VAIKvlk~~~~~~~~~~~~~~Ev~iL~~l~HpnIv~l~g~------  357 (558)
                      -.|+.+.   ++.++..-.|+.|.++-.+ ++..|.||-..     .-..+-+..++...=.+..|+..-+.-.      
T Consensus        61 ~~i~w~~l~~v~~I~~s~~Gstgvff~~t-d~~~~VVK~s~-----~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e  134 (342)
T 1cja_A           61 GDINWKNLQQFKGIERSEKGTEGLFFVET-ESGVFIVKRST-----NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTN  134 (342)
T ss_dssp             TCCCTTCGGGEEEEEECCSTTSCEEEEEE-SSCEEEEECCT-----THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHH
T ss_pred             cccccccccCeeEEEeccCCCCCeEEEEe-CCCEEEEeCcH-----HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHH
Confidence            3566666   7777777888777555555 67788888431     2222334444444444556654332211      


Q ss_pred             ----------------ecCCCCceeEEEecCCCCHHHHHHh-hccCCCHHHHHHHHHHH--HHHHHHHHHCC----cee-
Q 008656          358 ----------------CTKPPSLCIVTEFMSGGSVYDYLHK-LKGVFKLPSLLKVAIDV--SKGMNYLHQNN----IIH-  413 (558)
Q Consensus       358 ----------------~~~~~~~~lV~E~~~ggsL~~~l~~-~~~~l~~~~~~~i~~qI--~~aL~yLH~~g----IiH-  413 (558)
                                      ....+...++|+|.+|..|.+.-.. ....+...    ...++  +-+++.+.+++    .+. 
T Consensus       135 ~~~~L~~~~~~~~~l~~l~~~~~~l~meyv~G~~L~e~~~~~~~~~f~~~----~~k~LG~Ii~FDi~InN~DR~Pl~W~  210 (342)
T 1cja_A          135 MLECLAAIDKSFRVITTLANQANILLMELVRGITLNKLTTTSAPEVLTKS----TMQQLGSLMALDVIVNNSDRLPIAWT  210 (342)
T ss_dssp             HHHHHHHHCSSSCHHHHHTTCSEEEEEECCCEEESTTCCSSSHHHHSCHH----HHHHHHHHHHHHHHHTCCSSSCSSSC
T ss_pred             HHHHHHHhhhhhHHHHHhhcccceehhhhcCCCccccchhhhhhhhcCHH----HHHhhchhheehhhhcCCccCccccc
Confidence                            0012245699999988766543211 01112222    22332  33556666553    111 


Q ss_pred             ccCCCCcEEeCCCCc-EEEEecCcceec
Q 008656          414 RDLKAANLLMDENEV-VKVADFGVARVK  440 (558)
Q Consensus       414 rDLKp~NILl~~~~~-vkL~DFG~a~~~  440 (558)
                      .--.++|||++.++. +.++|-+.+...
T Consensus       211 n~GN~~NIL~~~~n~~~~~IDhn~af~~  238 (342)
T 1cja_A          211 NEGNLDNIMLSERGATVVPIDSKIIPLD  238 (342)
T ss_dssp             SCCCGGGEEEESBTTCEEECSCCCCCCC
T ss_pred             CCCChhheEEeCCCCeEEEEcCCccccC
Confidence            225789999987554 889999888543


No 302
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=68.92  E-value=13  Score=35.34  Aligned_cols=115  Identities=14%  Similarity=0.132  Sum_probs=73.2

Q ss_pred             cCCCceEEEeeecCCCCceeEEEecCCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHH-HHHHCCceeccCCCCcEEeCC
Q 008656          347 RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMN-YLHQNNIIHRDLKAANLLMDE  425 (558)
Q Consensus       347 ~HpnIv~l~g~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qI~~aL~-yLH~~gIiHrDLKp~NILl~~  425 (558)
                      .||++..-+.  ..++.+.|.++.-+++.=...++    .++....++++.+|+.... ++  ..-+|--|.|+||+++.
T Consensus        48 ~~~~f~~~I~--~~eD~~~i~y~~~~~~~~f~~i~----~~~~~eKlrll~nl~~L~~~~~--~~r~tf~l~P~NL~f~~  119 (219)
T 4ano_A           48 VDPCIVRDID--VSEDEVKVVIKPPSSFLTFAAIR----KTTLLSRIRAAIHLVSKVKHHS--ARRLIFIVCPENLMFNR  119 (219)
T ss_dssp             SCSSSEEEEE--ECSSEEEEEEECCTTCEEHHHHH----TSCHHHHHHHHHHHHHHHSSCC--SSSEECCCCGGGEEECT
T ss_pred             cCCCCCeEEE--EeCCEEEEEEEcCcccCcHHHHH----hcCHHHHHHHHHHHHHHHHHhh--hCceeEEEeCceEEEeC
Confidence            5788833332  45555665555543333233343    3688888888888877655 44  44577889999999999


Q ss_pred             CCcEEEEecCcceecccCCccccCCCCCCccchhhhcCCCCCchHHHHHHHHHHHHHHcCCCCCC
Q 008656          426 NEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYE  490 (558)
Q Consensus       426 ~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~APEv~~~~~~s~ksDVwSlGilL~elltG~~Pf~  490 (558)
                      ++.++|.-.|+-...                +|.     .++...=+-.+=|++..++.++..|.
T Consensus       120 ~~~p~i~hRGi~~~l----------------pP~-----e~~ee~fl~qyKali~all~~K~~Fe  163 (219)
T 4ano_A          120 ALEPFFLHVGVKESL----------------PPD-----EWDDERLLREVKATVLALTEGEYRFD  163 (219)
T ss_dssp             TCCEEESCCEETTTB----------------SSC-----SCCHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred             CCcEEEEEcCCcccC----------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence            999999987764211                111     12222233457788888988887764


No 303
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=65.43  E-value=4.7  Score=38.40  Aligned_cols=59  Identities=25%  Similarity=0.397  Sum_probs=41.1

Q ss_pred             ceeeecCChhhHHHHHHHHHHhhccchhhccccccC----CCceeeEEEEcCCChhhHHHHHHHHH
Q 008656          181 EITFSTDDKPKLLSQLTALLADIGLNIQEAHAFSTV----DGYSLDVFVVDGWPYEETEQLRAALE  242 (558)
Q Consensus       181 ei~~~~~d~~~~l~~l~~~~~~~~~~i~~a~~f~t~----~g~~ldv~vv~~~~~~~~~~l~~~l~  242 (558)
                      .|.+...|+|++|+.++++|++.+.||...+++...    +|...=.+-+++-   ..+++.++|+
T Consensus         6 tL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~kG~~ng~A~I~IEV~d~---~Le~LL~kLr   68 (223)
T 1y7p_A            6 GLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIYFEIEGG---DFEKILERVK   68 (223)
T ss_dssp             EEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEEEEECSS---CHHHHHHHHH
T ss_pred             EEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccccCCcCCEEEEEEEECCC---CHHHHHHHHh
Confidence            688889999999999999999999999999998877    6654444444443   4445544443


No 304
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=60.90  E-value=15  Score=32.56  Aligned_cols=59  Identities=17%  Similarity=0.250  Sum_probs=44.1

Q ss_pred             ceeeecCChhhHHHHHHHHHHhhccchhhccccccCCCceeeEEEEcCCChhhHHHHHHHHHH
Q 008656          181 EITFSTDDKPKLLSQLTALLADIGLNIQEAHAFSTVDGYSLDVFVVDGWPYEETEQLRAALEK  243 (558)
Q Consensus       181 ei~~~~~d~~~~l~~l~~~~~~~~~~i~~a~~f~t~~g~~ldv~vv~~~~~~~~~~l~~~l~~  243 (558)
                      +|.+.+.|++++|..++.+|++.+.||.-..+-..  |. +.+ .+.....++...|..++..
T Consensus         2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~~--g~-i~~-~~~~~~~~~~~~L~~~l~~   60 (190)
T 2jhe_A            2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPI--GR-IYL-NFAELEFESFSSLMAEIRR   60 (190)
T ss_dssp             EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEETT--TE-EEE-EECCCCHHHHHHHHHHHHH
T ss_pred             EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEecC--CE-EEE-EEEeCCHHHHHHHHHHHHc
Confidence            47788999999999999999999999999888443  65 433 3445666666666655543


No 305
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=58.93  E-value=99  Score=33.88  Aligned_cols=25  Identities=28%  Similarity=0.325  Sum_probs=22.8

Q ss_pred             ccCCCCcEEeCCCCcEEEEecCcce
Q 008656          414 RDLKAANLLMDENEVVKVADFGVAR  438 (558)
Q Consensus       414 rDLKp~NILl~~~~~vkL~DFG~a~  438 (558)
                      +|=.++||||+.+|++.=+|||.+-
T Consensus       477 gDRH~~NILld~tG~v~HIDFG~~f  501 (614)
T 3ls8_A          477 GDRHLDNLLLTKTGKLFHIDFGYIL  501 (614)
T ss_dssp             CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred             cCCCCcceeEcCCCCEeeeehHHhh
Confidence            5888999999999999999999873


No 306
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=55.08  E-value=48  Score=36.97  Aligned_cols=25  Identities=32%  Similarity=0.352  Sum_probs=23.1

Q ss_pred             ccCCCCcEEeCCCCcEEEEecCcce
Q 008656          414 RDLKAANLLMDENEVVKVADFGVAR  438 (558)
Q Consensus       414 rDLKp~NILl~~~~~vkL~DFG~a~  438 (558)
                      +|-.++||||+.+|++.-+|||.+-
T Consensus       551 GDRH~~NILid~tG~v~HIDFG~~f  575 (696)
T 2x6h_A          551 GDRHLDNLLLTTNGKLFHIDFGYIL  575 (696)
T ss_dssp             CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred             CCCCCcceEEeCCCCEEEEeehhhh
Confidence            6889999999999999999999873


No 307
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=51.36  E-value=3.1e+02  Score=32.19  Aligned_cols=25  Identities=20%  Similarity=0.306  Sum_probs=23.2

Q ss_pred             ccCCCCcEEeCCCCcEEEEecCcce
Q 008656          414 RDLKAANLLMDENEVVKVADFGVAR  438 (558)
Q Consensus       414 rDLKp~NILl~~~~~vkL~DFG~a~  438 (558)
                      +|=.++||||+.+|++.-+|||.+-
T Consensus       940 GDRH~~NILid~tG~v~HIDFG~~f  964 (1092)
T 2y3a_A          940 GDRHSDNIMVKKTGQLFHIDFGHIL  964 (1092)
T ss_dssp             CCCCTTTEEECTTSCEEECCCSCCS
T ss_pred             CCCCCccEEEecCCCEEEEeehhhh
Confidence            7899999999999999999999873


No 308
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=45.58  E-value=25  Score=30.36  Aligned_cols=39  Identities=18%  Similarity=0.304  Sum_probs=34.0

Q ss_pred             ccceeeecCChhhHHHHHHHHHHhhccchhhccccccCC
Q 008656          179 MHEITFSTDDKPKLLSQLTALLADIGLNIQEAHAFSTVD  217 (558)
Q Consensus       179 ~~ei~~~~~d~~~~l~~l~~~~~~~~~~i~~a~~f~t~~  217 (558)
                      .|.|++--.|+|+.+.++..+|++-|.||.--....+.+
T Consensus         6 ~~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~   44 (144)
T 2f06_A            6 AKQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENAD   44 (144)
T ss_dssp             EEEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSS
T ss_pred             EEEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecCC
Confidence            589999999999999999999999999998876655544


No 309
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=36.69  E-value=3.1e+02  Score=31.58  Aligned_cols=25  Identities=24%  Similarity=0.324  Sum_probs=22.9

Q ss_pred             ccCCCCcEEeCCCCcEEEEecCcce
Q 008656          414 RDLKAANLLMDENEVVKVADFGVAR  438 (558)
Q Consensus       414 rDLKp~NILl~~~~~vkL~DFG~a~  438 (558)
                      +|=.++||||+.+|++.-+|||.+-
T Consensus       788 gDRH~~NILid~tG~v~HIDFG~~f  812 (940)
T 2wxf_A          788 GDRHSDNIMIRESGQLFHIDFGHFL  812 (940)
T ss_dssp             CCCCGGGEEEETTSCEEECCCCCCT
T ss_pred             CCCCcccEEEecCCCEEEEeehhhh
Confidence            6889999999999999999999873


No 310
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=31.83  E-value=4.2  Score=43.15  Aligned_cols=30  Identities=7%  Similarity=-0.044  Sum_probs=25.9

Q ss_pred             HHHHHHHHHHHHhccCCCceEEEeeecCCC
Q 008656          333 QKEFAQEVFIMRKVRHKNVVQFIGACTKPP  362 (558)
Q Consensus       333 ~~~~~~Ev~iL~~l~HpnIv~l~g~~~~~~  362 (558)
                      .++|..|+..+.+++|+|+|+++|+|....
T Consensus       323 ~~eF~~Eve~L~~i~HrNLV~L~gyC~s~~  352 (487)
T 3oja_A          323 SETERLECERENQARQREIDALKEQYRTVI  352 (487)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred             HHHHHHHHHHHhcccccchhhHHHHhcChH
Confidence            568999999999999999999999997654


No 311
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=31.06  E-value=71  Score=37.45  Aligned_cols=61  Identities=11%  Similarity=0.119  Sum_probs=38.8

Q ss_pred             CCHHHHHHhhccCCCHHHH-HHHHHHHHH--HHHHHHHCCceeccCCCCcEEeCCCCcEEEEecCcce
Q 008656          374 GSVYDYLHKLKGVFKLPSL-LKVAIDVSK--GMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVAR  438 (558)
Q Consensus       374 gsL~~~l~~~~~~l~~~~~-~~i~~qI~~--aL~yLH~~gIiHrDLKp~NILl~~~~~vkL~DFG~a~  438 (558)
                      +.|.+|+........+..+ ..++.+++.  .+.|+=  ||  +|=.++||||+.+|++.-+|||.+-
T Consensus       898 ~~L~~~f~~~~~~~~~~~ar~nF~~S~A~ysvv~YiL--gi--gDRH~~NILid~tG~v~HIDFG~~f  961 (1091)
T 3hhm_A          898 HTLHQWLKDKNKGEIYDAAIDLFTRSCAGYCVATFIL--GI--GDRHNSNIMVKDDGQLFHIDFGHFL  961 (1091)
T ss_dssp             THHHHHHHTTSCTTSHHHHHHHHHHHHHHHHHHHHHH--TC--CCCCTTTEEEETTSCEEECCCCCCS
T ss_pred             hHHHHHHHhcCChHHHHHHHHHHHHHhhhhhheEEEE--ee--cCCCCcceEEeCCCCEEEEeehhhh
Confidence            4566676554333334433 334444433  233443  33  5888999999999999999999873


No 312
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=26.16  E-value=61  Score=33.53  Aligned_cols=50  Identities=16%  Similarity=0.266  Sum_probs=43.0

Q ss_pred             ccceeeecCChhhHHHHHHHHHHhhccchhhccccccCCCceeeEEEEcCC
Q 008656          179 MHEITFSTDDKPKLLSQLTALLADIGLNIQEAHAFSTVDGYSLDVFVVDGW  229 (558)
Q Consensus       179 ~~ei~~~~~d~~~~l~~l~~~~~~~~~~i~~a~~f~t~~g~~ldv~vv~~~  229 (558)
                      .+-|++.-.|+|+.+.+++++|++-|+||..-...+ ..|..+-++-+|+-
T Consensus       331 ~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r-~g~~A~~vidvD~~  380 (404)
T 1sc6_A          331 GRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQT-SAQMGYVVIDIEAD  380 (404)
T ss_dssp             SEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEE-CSSEEEEEEEEECC
T ss_pred             cceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccC-CCCEEEEEEEcCCC
Confidence            446888899999999999999999999998877665 77888888888874


No 313
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=22.95  E-value=1e+02  Score=26.29  Aligned_cols=29  Identities=24%  Similarity=0.369  Sum_probs=25.7

Q ss_pred             ecCChhhHHHHHHHHHHhhccchhhcccc
Q 008656          185 STDDKPKLLSQLTALLADIGLNIQEAHAF  213 (558)
Q Consensus       185 ~~~d~~~~l~~l~~~~~~~~~~i~~a~~f  213 (558)
                      --.|+|+.++++..+|++-|.||.-..+|
T Consensus        78 ~~~d~pGvla~i~~~L~~~~InI~~~~~~  106 (144)
T 2f06_A           78 SCPNVPGALAKVLGFLSAEGVFIEYMYSF  106 (144)
T ss_dssp             EEESSTTHHHHHHHHHHHTTCCEEEEEEE
T ss_pred             EeCCCCcHHHHHHHHHHHCCCCEEEEEEE
Confidence            56799999999999999999999766666


No 314
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=21.66  E-value=1.3e+02  Score=30.67  Aligned_cols=67  Identities=22%  Similarity=0.240  Sum_probs=49.8

Q ss_pred             ccceeeecCC-hhhHHHHHHHHHHhhccchhhccccccCCCceeeEEEEcCCChhhHHHHHHHHHHHHHH
Q 008656          179 MHEITFSTDD-KPKLLSQLTALLADIGLNIQEAHAFSTVDGYSLDVFVVDGWPYEETEQLRAALEKEVLK  247 (558)
Q Consensus       179 ~~ei~~~~~d-~~~~l~~l~~~~~~~~~~i~~a~~f~t~~g~~ldv~vv~~~~~~~~~~l~~~l~~~~~~  247 (558)
                      -+-+++...+ +|.++..++..+++.|+||......+...++.+++.+ ..-+ ....+++.++..-...
T Consensus       101 ~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~~~~~~~~~~~~v-~~~~-~~~~~l~~~l~~l~~~  168 (415)
T 3p96_A          101 THTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVSDYPVIGLELRV-SVPP-GADEALRTALNRVSSE  168 (415)
T ss_dssp             SEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEEESSSSEEEEEEE-ECCT-TCHHHHHHHHHHHHHH
T ss_pred             cEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeeccCCCceEEEEEe-eCCC-CCHHHHHHHHHHHhhh
Confidence            4578888888 9999999999999999999887766655566666653 3333 5677777777765443


No 315
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=21.33  E-value=1.4e+02  Score=31.98  Aligned_cols=59  Identities=19%  Similarity=0.177  Sum_probs=48.7

Q ss_pred             cCcccceeeecCChhhHHHHHHHHHHhhccchhhcccccc-CCCceeeEEEEcCCChhhH
Q 008656          176 SRPMHEITFSTDDKPKLLSQLTALLADIGLNIQEAHAFST-VDGYSLDVFVVDGWPYEET  234 (558)
Q Consensus       176 ~~~~~ei~~~~~d~~~~l~~l~~~~~~~~~~i~~a~~f~t-~~g~~ldv~vv~~~~~~~~  234 (558)
                      ....|.+.+.-.|+|+.+.+++++|++-|.||..-++.-. .+|..+=++.||.-..++.
T Consensus       451 ~~~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~vd~~~~~~~  510 (529)
T 1ygy_A          451 RAQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLDQDVPDDV  510 (529)
T ss_dssp             ESCSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEESSCCCHHH
T ss_pred             cCCccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEECCCCCHHH
Confidence            3457889999999999999999999999999998877654 4677888888887665443


No 316
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=20.39  E-value=99  Score=35.81  Aligned_cols=25  Identities=24%  Similarity=0.321  Sum_probs=22.7

Q ss_pred             ccCCCCcEEeCCCCcEEEEecCcce
Q 008656          414 RDLKAANLLMDENEVVKVADFGVAR  438 (558)
Q Consensus       414 rDLKp~NILl~~~~~vkL~DFG~a~  438 (558)
                      +|=.++||||+.+|++.-+|||.+-
T Consensus       804 gDRH~~NILid~tG~v~HIDFG~~f  828 (961)
T 1e7u_A          804 GDRHNDNIMISETGNLFHIDFGHIL  828 (961)
T ss_dssp             CCCCGGGEEEETTCCEEECCCCCC-
T ss_pred             cCCCCcceEEecCCCEEEEeehhhh
Confidence            6889999999999999999999874


Done!