BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008659
(558 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2IUJ|A Chain A, Crystal Structure Of Soybean Lipoxygenase-B
Length = 853
Score = 355 bits (912), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 192/423 (45%), Positives = 262/423 (61%), Gaps = 9/423 (2%)
Query: 141 YESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQK 199
Y+++F+ S FG GA ++N E YLK ++L+ +PN G ++ CNSW+++ K
Sbjct: 95 YDAQFDWDSDFGIPGAFYIKNYMQNEFYLKSLILEDIPNHGTIHFICNSWVYNSKHYKTD 154
Query: 200 RVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPE 259
R+FF N YLPS+TP L +YR EEL +RG+G GERK +DRIYDYDVYNDLGDPDK +
Sbjct: 155 RIFFANNTYLPSETPAPLVKYREEELKNVRGDGTGERKEWDRIYDYDVYNDLGDPDKGEK 214
Query: 260 LARPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYS 319
ARPVLGG PYPRR RTGR + D SEK Y+PRDEAF +K F A + S
Sbjct: 215 YARPVLGGSALPYPRRGRTGRGKTRKDPNSEKPGDFVYLPRDEAFGHLKSSDFLAYGIKS 274
Query: 320 VLHALVPSLETAFVDP--DLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIED 377
V ++P L AF L F F+ + L+ GV LP T +P + +
Sbjct: 275 VAQDVLPVLTDAFDGNLLSLDFDNFAEVRKLYEGGVTLPTNFLSNI--TPIPIIKELFRT 332
Query: 378 TGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPP 437
G+ L + P+ M DK W DEEF+R+T+AGLNP I++I E+PL S LD + YG
Sbjct: 333 DGEQFLKYPPPKVMQVDKSAWMTDEEFARETIAGLNPNVIKIIEEFPLSSKLDTQAYGDH 392
Query: 438 ESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFF 497
IT E +E +GG+ +VE+AI+ KKLFILD+HD +PY+ K+ +T Y +RTIFF
Sbjct: 393 TCIITKEHLEPNLGGL-TVEQAIQNKKLFILDHHDYLIPYLRKINA-NTTKTYATRTIFF 450
Query: 498 LTPAGTLRPIAIELTRPPMNGKPQW--KQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQL 555
L GTL P+AIEL++P G+ +V++PS E ++W LAKA+V+ +DA YHQ+
Sbjct: 451 LKNDGTLTPLAIELSKPHPQGEEYGPVSEVYVPSSEGVEAYIWLLAKAYVVVNDACYHQI 510
Query: 556 VSH 558
+SH
Sbjct: 511 ISH 513
>pdb|1ROV|A Chain A, Lipoxygenase-3 Treated With Cumene Hydroperoxide
Length = 857
Score = 331 bits (848), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 193/458 (42%), Positives = 268/458 (58%), Gaps = 17/458 (3%)
Query: 111 AELDPKTGLDKST-IQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYL 169
A+ + K L K+T ++ + G G ++ FE G G GA ++N E +L
Sbjct: 68 ADANGKGKLGKATFLEGIITSLPTLGAGQSAFKINFEWDDGSGIPGAFYIKNFMQTEFFL 127
Query: 170 KDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTIL 228
+ L+ +PN G ++ CNSW+++ K R+FF N+ YLPS+TP L +YR EEL L
Sbjct: 128 VSLTLEDIPNHGSIHFVCNSWIYNAKLFKSDRIFFANQTYLPSETPAPLVKYREEELHNL 187
Query: 229 RGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQ 287
RG+G GERK ++RIYDYDVYNDLGDPDK ARPVLGG PYPRR RTGR D
Sbjct: 188 RGDGTGERKEWERIYDYDVYNDLGDPDKGENHARPVLGGNDTFPYPRRGRTGRKPTRKDP 247
Query: 288 FSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFP-----YF 342
SE R + Y+PRDEAF +K F + SV ++P L++AF DL F F
Sbjct: 248 NSESRSNDVYLPRDEAFGHLKSSDFLTYGLKSVSQNVLPLLQSAF---DLNFTPREFDSF 304
Query: 343 SAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDE 402
+ L++ G+ LP + LP L + G+ L F P+ + K W DE
Sbjct: 305 DEVHGLYSGGIKLPTDIISKI--SPLPVLKEIFRTDGEQALKFPPPKVIQVSKSAWMTDE 362
Query: 403 EFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQ 462
EF+R+ LAG+NP IR + ++P +S LD ++YG S IT E +E + G+ +V+EAI+
Sbjct: 363 EFAREMLAGVNPNLIRCLKDFPPRSKLDSQVYGDHTSQITKEHLEPNLEGL-TVDEAIQN 421
Query: 463 KKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQ- 521
K+LF+LD+HD +PY+ ++ ST Y +RTI FL GTLRP+AIEL+ P G
Sbjct: 422 KRLFLLDHHDPIMPYLRRINA-TSTKAYATRTILFLKNDGTLRPLAIELSLPHPQGDQSG 480
Query: 522 -WKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSH 558
+ QVFLP+ E +W LAKA+V+ +D+ YHQLVSH
Sbjct: 481 AFSQVFLPADEGVESSIWLLAKAYVVVNDSCYHQLVSH 518
>pdb|1IK3|A Chain A, Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydroperoxy-
9(Z),11(E)-Octadecadienoic Acid
pdb|1HU9|A Chain A, Lipoxygenase-3 (Soybean) Complex With 4-Hydroperoxy-2-
Methoxy-Phenol
pdb|1JNQ|A Chain A, Lipoxygenase-3 (Soybean) Complex With Epigallocathechin
(Egc)
pdb|1N8Q|A Chain A, Lipoxygenase In Complex With Protocatechuic Acid
pdb|1NO3|A Chain A, Refined Structure Of Soybean Lipoxygenase-3 With
4-nitrocatechol At 2.15 Angstrom Resolution
pdb|1RRH|A Chain A, Soybean Lipoxygenase (Lox-3) At Ambient Temperatures At
2.0 A Resolution
pdb|1RRL|A Chain A, Soybean Lipoxygenase (Lox-3) At 93k At 2.0 A Resolution
pdb|1RRL|B Chain B, Soybean Lipoxygenase (Lox-3) At 93k At 2.0 A Resolution
pdb|1LNH|A Chain A, Lipoxygenase-3(Soybean) Non-Heme Fe(Ii) Metalloprotein
Length = 857
Score = 331 bits (848), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 193/458 (42%), Positives = 268/458 (58%), Gaps = 17/458 (3%)
Query: 111 AELDPKTGLDKST-IQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYL 169
A+ + K L K+T ++ + G G ++ FE G G GA ++N E +L
Sbjct: 68 ADANGKGKLGKATFLEGIITSLPTLGAGQSAFKINFEWDDGSGIPGAFYIKNFMQTEFFL 127
Query: 170 KDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTIL 228
+ L+ +PN G ++ CNSW+++ K R+FF N+ YLPS+TP L +YR EEL L
Sbjct: 128 VSLTLEDIPNHGSIHFVCNSWIYNAKLFKSDRIFFANQTYLPSETPAPLVKYREEELHNL 187
Query: 229 RGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQ 287
RG+G GERK ++RIYDYDVYNDLGDPDK ARPVLGG PYPRR RTGR D
Sbjct: 188 RGDGTGERKEWERIYDYDVYNDLGDPDKGENHARPVLGGNDTFPYPRRGRTGRKPTRKDP 247
Query: 288 FSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFP-----YF 342
SE R + Y+PRDEAF +K F + SV ++P L++AF DL F F
Sbjct: 248 NSESRSNDVYLPRDEAFGHLKSSDFLTYGLKSVSQNVLPLLQSAF---DLNFTPREFDSF 304
Query: 343 SAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDE 402
+ L++ G+ LP + LP L + G+ L F P+ + K W DE
Sbjct: 305 DEVHGLYSGGIKLPTDIISKI--SPLPVLKEIFRTDGEQALKFPPPKVIQVSKSAWMTDE 362
Query: 403 EFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQ 462
EF+R+ LAG+NP IR + ++P +S LD ++YG S IT E +E + G+ +V+EAI+
Sbjct: 363 EFAREMLAGVNPNLIRCLKDFPPRSKLDSQVYGDHTSQITKEHLEPNLEGL-TVDEAIQN 421
Query: 463 KKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQ- 521
K+LF+LD+HD +PY+ ++ ST Y +RTI FL GTLRP+AIEL+ P G
Sbjct: 422 KRLFLLDHHDPIMPYLRRINA-TSTKAYATRTILFLKNDGTLRPLAIELSLPHPQGDQSG 480
Query: 522 -WKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSH 558
+ QVFLP+ E +W LAKA+V+ +D+ YHQLVSH
Sbjct: 481 AFSQVFLPADEGVESSIWLLAKAYVVVNDSCYHQLVSH 518
>pdb|3PZW|A Chain A, Soybean Lipoxygenase-1 - Re-Refinement
Length = 839
Score = 327 bits (839), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 184/432 (42%), Positives = 252/432 (58%), Gaps = 15/432 (3%)
Query: 135 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSK 193
G G + FE G GA ++N E +LK + L+ + N G + CNSW+++
Sbjct: 75 GAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNT 134
Query: 194 HDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGD 253
K R+FF N Y+PS+TP L YR EEL LRGNG GERK YDRIYDYDVYNDLG+
Sbjct: 135 KLYKSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGN 194
Query: 254 PDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTF 312
PDK +LARPVLGG PYPRR RTGR TD +EK+ FYVPRDE +K
Sbjct: 195 PDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDA 254
Query: 313 SAKTVYSVLHALVPSLETAF--VDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPR 370
S+ + P+ E+AF + F F + L+ G+ LP +T++P
Sbjct: 255 LEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP----RDVISTIIPL 310
Query: 371 -LVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKST 428
++K + T G +IL F P + + W DEEF+R+ +AG+NP IR + E+P KS
Sbjct: 311 PVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSN 370
Query: 429 LDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTT 488
LDP IYG S IT + ++ + +++EA+ ++LF+LDYHD+F+PYV ++ QL S
Sbjct: 371 LDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAK 427
Query: 489 LYGSRTIFFLTPAGTLRPIAIELTRPPMNG--KPQWKQVFLPSWHSTECWLWKLAKAHVL 546
Y +RTI FL GTL+P+AIEL+ P G QV LP+ E +W LAKA+V+
Sbjct: 428 TYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVI 487
Query: 547 AHDAGYHQLVSH 558
+D+ YHQL+SH
Sbjct: 488 VNDSCYHQLMSH 499
>pdb|1Y4K|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694g Mutant
Length = 839
Score = 327 bits (839), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 184/432 (42%), Positives = 252/432 (58%), Gaps = 15/432 (3%)
Query: 135 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSK 193
G G + FE G GA ++N E +LK + L+ + N G + CNSW+++
Sbjct: 75 GAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNT 134
Query: 194 HDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGD 253
K R+FF N Y+PS+TP L YR EEL LRGNG GERK YDRIYDYDVYNDLG+
Sbjct: 135 KLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGN 194
Query: 254 PDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTF 312
PDK +LARPVLGG PYPRR RTGR TD +EK+ FYVPRDE +K
Sbjct: 195 PDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDA 254
Query: 313 SAKTVYSVLHALVPSLETAF--VDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPR 370
S+ + P+ E+AF + F F + L+ G+ LP +T++P
Sbjct: 255 LEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP----RDVISTIIPL 310
Query: 371 -LVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKST 428
++K + T G +IL F P + + W DEEF+R+ +AG+NP IR + E+P KS
Sbjct: 311 PVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSN 370
Query: 429 LDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTT 488
LDP IYG S IT + ++ + +++EA+ ++LF+LDYHD+F+PYV ++ QL S
Sbjct: 371 LDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAK 427
Query: 489 LYGSRTIFFLTPAGTLRPIAIELTRPPMNG--KPQWKQVFLPSWHSTECWLWKLAKAHVL 546
Y +RTI FL GTL+P+AIEL+ P G QV LP+ E +W LAKA+V+
Sbjct: 428 TYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVI 487
Query: 547 AHDAGYHQLVSH 558
+D+ YHQL+SH
Sbjct: 488 VNDSCYHQLMSH 499
>pdb|3BND|A Chain A, Lipoxygenase-1 (Soybean), I553v Mutant
Length = 839
Score = 327 bits (839), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 184/432 (42%), Positives = 252/432 (58%), Gaps = 15/432 (3%)
Query: 135 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSK 193
G G + FE G GA ++N E +LK + L+ + N G + CNSW+++
Sbjct: 75 GAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNT 134
Query: 194 HDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGD 253
K R+FF N Y+PS+TP L YR EEL LRGNG GERK YDRIYDYDVYNDLG+
Sbjct: 135 KLYKSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGN 194
Query: 254 PDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTF 312
PDK +LARPVLGG PYPRR RTGR TD +EK+ FYVPRDE +K
Sbjct: 195 PDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDA 254
Query: 313 SAKTVYSVLHALVPSLETAF--VDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPR 370
S+ + P+ E+AF + F F + L+ G+ LP +T++P
Sbjct: 255 LEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP----RDVISTIIPL 310
Query: 371 -LVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKST 428
++K + T G +IL F P + + W DEEF+R+ +AG+NP IR + E+P KS
Sbjct: 311 PVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSN 370
Query: 429 LDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTT 488
LDP IYG S IT + ++ + +++EA+ ++LF+LDYHD+F+PYV ++ QL S
Sbjct: 371 LDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAK 427
Query: 489 LYGSRTIFFLTPAGTLRPIAIELTRPPMNG--KPQWKQVFLPSWHSTECWLWKLAKAHVL 546
Y +RTI FL GTL+P+AIEL+ P G QV LP+ E +W LAKA+V+
Sbjct: 428 TYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVI 487
Query: 547 AHDAGYHQLVSH 558
+D+ YHQL+SH
Sbjct: 488 VNDSCYHQLMSH 499
>pdb|1FGM|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694h Mutant
Length = 839
Score = 327 bits (839), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 184/432 (42%), Positives = 252/432 (58%), Gaps = 15/432 (3%)
Query: 135 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSK 193
G G + FE G GA ++N E +LK + L+ + N G + CNSW+++
Sbjct: 75 GAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNT 134
Query: 194 HDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGD 253
K R+FF N Y+PS+TP L YR EEL LRGNG GERK YDRIYDYDVYNDLG+
Sbjct: 135 KLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGN 194
Query: 254 PDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTF 312
PDK +LARPVLGG PYPRR RTGR TD +EK+ FYVPRDE +K
Sbjct: 195 PDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDA 254
Query: 313 SAKTVYSVLHALVPSLETAF--VDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPR 370
S+ + P+ E+AF + F F + L+ G+ LP +T++P
Sbjct: 255 LEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP----RDVISTIIPL 310
Query: 371 -LVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKST 428
++K + T G +IL F P + + W DEEF+R+ +AG+NP IR + E+P KS
Sbjct: 311 PVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSN 370
Query: 429 LDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTT 488
LDP IYG S IT + ++ + +++EA+ ++LF+LDYHD+F+PYV ++ QL S
Sbjct: 371 LDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAK 427
Query: 489 LYGSRTIFFLTPAGTLRPIAIELTRPPMNG--KPQWKQVFLPSWHSTECWLWKLAKAHVL 546
Y +RTI FL GTL+P+AIEL+ P G QV LP+ E +W LAKA+V+
Sbjct: 428 TYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVI 487
Query: 547 AHDAGYHQLVSH 558
+D+ YHQL+SH
Sbjct: 488 VNDSCYHQLMSH 499
>pdb|3BNC|A Chain A, Lipoxygenase-1 (Soybean) I553g Mutant
Length = 839
Score = 327 bits (839), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 184/432 (42%), Positives = 252/432 (58%), Gaps = 15/432 (3%)
Query: 135 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSK 193
G G + FE G GA ++N E +LK + L+ + N G + CNSW+++
Sbjct: 75 GAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNT 134
Query: 194 HDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGD 253
K R+FF N Y+PS+TP L YR EEL LRGNG GERK YDRIYDYDVYNDLG+
Sbjct: 135 KLYKSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGN 194
Query: 254 PDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTF 312
PDK +LARPVLGG PYPRR RTGR TD +EK+ FYVPRDE +K
Sbjct: 195 PDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDA 254
Query: 313 SAKTVYSVLHALVPSLETAF--VDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPR 370
S+ + P+ E+AF + F F + L+ G+ LP +T++P
Sbjct: 255 LEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP----RDVISTIIPL 310
Query: 371 -LVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKST 428
++K + T G +IL F P + + W DEEF+R+ +AG+NP IR + E+P KS
Sbjct: 311 PVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSN 370
Query: 429 LDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTT 488
LDP IYG S IT + ++ + +++EA+ ++LF+LDYHD+F+PYV ++ QL S
Sbjct: 371 LDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAK 427
Query: 489 LYGSRTIFFLTPAGTLRPIAIELTRPPMNG--KPQWKQVFLPSWHSTECWLWKLAKAHVL 546
Y +RTI FL GTL+P+AIEL+ P G QV LP+ E +W LAKA+V+
Sbjct: 428 TYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVI 487
Query: 547 AHDAGYHQLVSH 558
+D+ YHQL+SH
Sbjct: 488 VNDSCYHQLMSH 499
>pdb|2SBL|B Chain B, The Three-Dimensional Structure Of An Arachidonic Acid 15-
Lipoxygenase
pdb|1F8N|A Chain A, Lipoxygenase-1 (Soybean) At 100k, New Refinement
pdb|1YGE|A Chain A, Lipoxygenase-1 (Soybean) At 100k
pdb|2SBL|A Chain A, The Three-Dimensional Structure Of An Arachidonic Acid 15-
Lipoxygenase
Length = 839
Score = 327 bits (839), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 184/432 (42%), Positives = 252/432 (58%), Gaps = 15/432 (3%)
Query: 135 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSK 193
G G + FE G GA ++N E +LK + L+ + N G + CNSW+++
Sbjct: 75 GAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNT 134
Query: 194 HDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGD 253
K R+FF N Y+PS+TP L YR EEL LRGNG GERK YDRIYDYDVYNDLG+
Sbjct: 135 KLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGN 194
Query: 254 PDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTF 312
PDK +LARPVLGG PYPRR RTGR TD +EK+ FYVPRDE +K
Sbjct: 195 PDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDA 254
Query: 313 SAKTVYSVLHALVPSLETAF--VDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPR 370
S+ + P+ E+AF + F F + L+ G+ LP +T++P
Sbjct: 255 LEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP----RDVISTIIPL 310
Query: 371 -LVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKST 428
++K + T G +IL F P + + W DEEF+R+ +AG+NP IR + E+P KS
Sbjct: 311 PVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSN 370
Query: 429 LDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTT 488
LDP IYG S IT + ++ + +++EA+ ++LF+LDYHD+F+PYV ++ QL S
Sbjct: 371 LDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAK 427
Query: 489 LYGSRTIFFLTPAGTLRPIAIELTRPPMNG--KPQWKQVFLPSWHSTECWLWKLAKAHVL 546
Y +RTI FL GTL+P+AIEL+ P G QV LP+ E +W LAKA+V+
Sbjct: 428 TYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVI 487
Query: 547 AHDAGYHQLVSH 558
+D+ YHQL+SH
Sbjct: 488 VNDSCYHQLMSH 499
>pdb|1FGR|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant
Length = 839
Score = 327 bits (838), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 184/432 (42%), Positives = 252/432 (58%), Gaps = 15/432 (3%)
Query: 135 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSK 193
G G + FE G GA ++N E +LK + L+ + N G + CNSW+++
Sbjct: 75 GAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNT 134
Query: 194 HDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGD 253
K R+FF N Y+PS+TP L YR EEL LRGNG GERK YDRIYDYDVYNDLG+
Sbjct: 135 KLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGN 194
Query: 254 PDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTF 312
PDK +LARPVLGG PYPRR RTGR TD +EK+ FYVPRDE +K
Sbjct: 195 PDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDA 254
Query: 313 SAKTVYSVLHALVPSLETAF--VDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPR 370
S+ + P+ E+AF + F F + L+ G+ LP +T++P
Sbjct: 255 LEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP----RDVISTIIPL 310
Query: 371 -LVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKST 428
++K + T G +IL F P + + W DEEF+R+ +AG+NP IR + E+P KS
Sbjct: 311 PVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSN 370
Query: 429 LDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTT 488
LDP IYG S IT + ++ + +++EA+ ++LF+LDYHD+F+PYV ++ QL S
Sbjct: 371 LDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAK 427
Query: 489 LYGSRTIFFLTPAGTLRPIAIELTRPPMNG--KPQWKQVFLPSWHSTECWLWKLAKAHVL 546
Y +RTI FL GTL+P+AIEL+ P G QV LP+ E +W LAKA+V+
Sbjct: 428 TYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVI 487
Query: 547 AHDAGYHQLVSH 558
+D+ YHQL+SH
Sbjct: 488 VNDSCYHQLMSH 499
>pdb|3BNE|A Chain A, Lipoxygenase-1 (Soybean) I553a Mutant
Length = 839
Score = 327 bits (838), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 184/432 (42%), Positives = 252/432 (58%), Gaps = 15/432 (3%)
Query: 135 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSK 193
G G + FE G GA ++N E +LK + L+ + N G + CNSW+++
Sbjct: 75 GAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNT 134
Query: 194 HDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGD 253
K R+FF N Y+PS+TP L YR EEL LRGNG GERK YDRIYDYDVYNDLG+
Sbjct: 135 KLYKSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGN 194
Query: 254 PDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTF 312
PDK +LARPVLGG PYPRR RTGR TD +EK+ FYVPRDE +K
Sbjct: 195 PDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDA 254
Query: 313 SAKTVYSVLHALVPSLETAF--VDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPR 370
S+ + P+ E+AF + F F + L+ G+ LP +T++P
Sbjct: 255 LEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP----RDVISTIIPL 310
Query: 371 -LVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKST 428
++K + T G +IL F P + + W DEEF+R+ +AG+NP IR + E+P KS
Sbjct: 311 PVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSN 370
Query: 429 LDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTT 488
LDP IYG S IT + ++ + +++EA+ ++LF+LDYHD+F+PYV ++ QL S
Sbjct: 371 LDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAK 427
Query: 489 LYGSRTIFFLTPAGTLRPIAIELTRPPMNG--KPQWKQVFLPSWHSTECWLWKLAKAHVL 546
Y +RTI FL GTL+P+AIEL+ P G QV LP+ E +W LAKA+V+
Sbjct: 428 TYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVI 487
Query: 547 AHDAGYHQLVSH 558
+D+ YHQL+SH
Sbjct: 488 VNDSCYHQLMSH 499
>pdb|1FGT|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant
Length = 839
Score = 327 bits (838), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 184/432 (42%), Positives = 252/432 (58%), Gaps = 15/432 (3%)
Query: 135 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSK 193
G G + FE G GA ++N E +LK + L+ + N G + CNSW+++
Sbjct: 75 GAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNT 134
Query: 194 HDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGD 253
K R+FF N Y+PS+TP L YR EEL LRGNG GERK YDRIYDYDVYNDLG+
Sbjct: 135 KLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGN 194
Query: 254 PDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTF 312
PDK +LARPVLGG PYPRR RTGR TD +EK+ FYVPRDE +K
Sbjct: 195 PDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDA 254
Query: 313 SAKTVYSVLHALVPSLETAF--VDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPR 370
S+ + P+ E+AF + F F + L+ G+ LP +T++P
Sbjct: 255 LEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP----RDVISTIIPL 310
Query: 371 -LVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKST 428
++K + T G +IL F P + + W DEEF+R+ +AG+NP IR + E+P KS
Sbjct: 311 PVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSN 370
Query: 429 LDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTT 488
LDP IYG S IT + ++ + +++EA+ ++LF+LDYHD+F+PYV ++ QL S
Sbjct: 371 LDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAK 427
Query: 489 LYGSRTIFFLTPAGTLRPIAIELTRPPMNG--KPQWKQVFLPSWHSTECWLWKLAKAHVL 546
Y +RTI FL GTL+P+AIEL+ P G QV LP+ E +W LAKA+V+
Sbjct: 428 TYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVI 487
Query: 547 AHDAGYHQLVSH 558
+D+ YHQL+SH
Sbjct: 488 VNDSCYHQLMSH 499
>pdb|3BNB|A Chain A, Lipoxygenase-1 (Soybean) I553l Mutant
Length = 839
Score = 327 bits (838), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 184/432 (42%), Positives = 252/432 (58%), Gaps = 15/432 (3%)
Query: 135 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSK 193
G G + FE G GA ++N E +LK + L+ + N G + CNSW+++
Sbjct: 75 GAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNT 134
Query: 194 HDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGD 253
K R+FF N Y+PS+TP L YR EEL LRGNG GERK YDRIYDYDVYNDLG+
Sbjct: 135 KLYKSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGN 194
Query: 254 PDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTF 312
PDK +LARPVLGG PYPRR RTGR TD +EK+ FYVPRDE +K
Sbjct: 195 PDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDA 254
Query: 313 SAKTVYSVLHALVPSLETAF--VDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPR 370
S+ + P+ E+AF + F F + L+ G+ LP +T++P
Sbjct: 255 LEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP----RDVISTIIPL 310
Query: 371 -LVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKST 428
++K + T G +IL F P + + W DEEF+R+ +AG+NP IR + E+P KS
Sbjct: 311 PVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSN 370
Query: 429 LDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTT 488
LDP IYG S IT + ++ + +++EA+ ++LF+LDYHD+F+PYV ++ QL S
Sbjct: 371 LDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAK 427
Query: 489 LYGSRTIFFLTPAGTLRPIAIELTRPPMNG--KPQWKQVFLPSWHSTECWLWKLAKAHVL 546
Y +RTI FL GTL+P+AIEL+ P G QV LP+ E +W LAKA+V+
Sbjct: 428 TYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVI 487
Query: 547 AHDAGYHQLVSH 558
+D+ YHQL+SH
Sbjct: 488 VNDSCYHQLMSH 499
>pdb|1FGQ|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant
Length = 839
Score = 326 bits (835), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 183/432 (42%), Positives = 252/432 (58%), Gaps = 15/432 (3%)
Query: 135 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSK 193
G G + FE G GA ++N E +LK + L+ + N G + CNSW+++
Sbjct: 75 GAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNT 134
Query: 194 HDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGD 253
K R+FF N Y+PS+TP L YR EEL LRGNG GERK YDRIYDYDVYNDLG+
Sbjct: 135 KLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGN 194
Query: 254 PDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTF 312
PDK +LARPVLGG PYPRR RTGR TD +EK+ FYVPRDE +K
Sbjct: 195 PDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDA 254
Query: 313 SAKTVYSVLHALVPSLETAF--VDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPR 370
S+ + P+ E+AF + F F + L+ G+ LP +T++P
Sbjct: 255 LEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP----RDVISTIIPL 310
Query: 371 -LVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKST 428
++K + T G +IL F P + + W DEEF+R+ +AG+NP IR + E+P KS
Sbjct: 311 PVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSN 370
Query: 429 LDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTT 488
LDP IYG S IT + ++ + +++EA+ ++LF+LDYHD+F+PYV ++ QL S
Sbjct: 371 LDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAK 427
Query: 489 LYGSRTIFFLTPAGTLRPIAIELTRPPMNG--KPQWKQVFLPSWHSTECWLWKLAKAHVL 546
Y +RTI FL GTL+P+AIEL+ P G QV LP+ E +W LAKA+V+
Sbjct: 428 TYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVI 487
Query: 547 AHDAGYHQLVSH 558
+D+ YH+L+SH
Sbjct: 488 VNDSCYHELMSH 499
>pdb|1FGO|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant
Length = 839
Score = 325 bits (833), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 183/432 (42%), Positives = 251/432 (58%), Gaps = 15/432 (3%)
Query: 135 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSK 193
G G + FE G GA ++N E +LK + L+ + N G + CNSW+++
Sbjct: 75 GAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNT 134
Query: 194 HDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGD 253
K R+FF N Y+PS+TP L YR EEL LRGNG GERK YDRIYDYDVYNDLG+
Sbjct: 135 KLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGN 194
Query: 254 PDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTF 312
PDK +LARPVLGG PYPRR RTGR TD +EK+ FYVPRDE +K
Sbjct: 195 PDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDA 254
Query: 313 SAKTVYSVLHALVPSLETAF--VDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPR 370
S+ + P+ E+AF + F F + L+ G+ LP +T++P
Sbjct: 255 LEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP----RDVISTIIPL 310
Query: 371 -LVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKST 428
++K + T G +IL F P + + W DEEF+R+ +AG+NP IR + E+P KS
Sbjct: 311 PVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSN 370
Query: 429 LDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTT 488
LDP IYG S IT + ++ + +++EA+ ++LF+LDYHD+F+PYV ++ QL S
Sbjct: 371 LDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAK 427
Query: 489 LYGSRTIFFLTPAGTLRPIAIELTRPPMNG--KPQWKQVFLPSWHSTECWLWKLAKAHVL 546
Y +RTI FL GTL+P+AIEL+ P G QV LP+ E +W LAKA+V+
Sbjct: 428 TYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVI 487
Query: 547 AHDAGYHQLVSH 558
+D+ YH L+SH
Sbjct: 488 VNDSCYHALMSH 499
>pdb|2IUK|A Chain A, Crystal Structure Of Soybean Lipoxygenase-D
pdb|2IUK|B Chain B, Crystal Structure Of Soybean Lipoxygenase-D
Length = 864
Score = 323 bits (827), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 183/423 (43%), Positives = 251/423 (59%), Gaps = 17/423 (4%)
Query: 145 FEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFF 203
FE + FG GA ++N E +L + L+ +PN G + CNSW+++ K+ R+FF
Sbjct: 111 FEWDASFGIPGAFYIKNFMTDEFFLVSVKLEDIPNHGTIEFVCNSWVYNFRSYKKNRIFF 170
Query: 204 TNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARP 263
N YLPS TP L +YR EE +LRG+G G+RK +DRIYDYDVYNDLG+PD RP
Sbjct: 171 VNDTYLPSATPAPLLKYRKEEFEVLRGDGTGKRKDFDRIYDYDVYNDLGNPDGGD--PRP 228
Query: 264 VLGGKQ-NPYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLH 322
+LGG PYP R RTGR R TD SEK G YVPRDE F +K F + S+ H
Sbjct: 229 ILGGCSIYPYPLRVRTGRERTRTDPNSEK-PGEVYVPRDENFGHLKSSDFLTYGIKSLSH 287
Query: 323 ALVPSLETAFVDPDLG---FPYFSAIDALFNEGVNLPP--LKQEGFWNTLLPRLVKAIED 377
++P ++A + F F + +L+ G+ LP L Q + LP L +
Sbjct: 288 DVIPLFKSAIFQLRVTSSEFESFEDVRSLYEGGIKLPTDILSQ----ISPLPALKEIFRT 343
Query: 378 TGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPP 437
G+N+L F P K DEEF+R+ +AG+NP IR + E+P KSTLDP +YG
Sbjct: 344 DGENVLQFPPPHVAKVSKSGVMTDEEFAREVIAGVNPNVIRRLQEFPPKSTLDPTLYGDQ 403
Query: 438 ESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFF 497
S IT E +E +GG ++VEEA+ ++LFILDY D F+PY+ ++ L + Y +RTI F
Sbjct: 404 TSTITKEQLEINMGG-VTVEEALSTQRLFILDYQDAFIPYLTRINSLPTAKAYATRTILF 462
Query: 498 LTPAGTLRPIAIELTRPPMNGKPQWKQ--VFLPSWHSTECWLWKLAKAHVLAHDAGYHQL 555
L GTL+P+AIEL++P +G + V LP+ + +W LAKAHV+ +D+GYHQL
Sbjct: 463 LKDDGTLKPLAIELSKPHPDGDNLGPESIVVLPATEGVDSTIWLLAKAHVIVNDSGYHQL 522
Query: 556 VSH 558
VSH
Sbjct: 523 VSH 525
>pdb|3V98|A Chain A, S663d Stable-5-Lox
pdb|3V98|B Chain B, S663d Stable-5-Lox
pdb|3V99|A Chain A, S663d Stable-5-Lox In Complex With Arachidonic Acid
pdb|3V99|B Chain B, S663d Stable-5-Lox In Complex With Arachidonic Acid
Length = 691
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 71/161 (44%), Gaps = 19/161 (11%)
Query: 398 WFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVE 457
W D F Q L G NP IR TE P K +TTE++E + +S+E
Sbjct: 244 WQEDLMFGYQFLNGANPVLIRRCTELPEKL------------PVTTEMVECSLERQLSLE 291
Query: 458 EAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMN 517
+ ++Q +FI+D+ L K L + + A + PIAI+L + P +
Sbjct: 292 QEVQQGNIFIVDFELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIPGD 351
Query: 518 GKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSH 558
P +FLPS + W LAK V + D HQ ++H
Sbjct: 352 ENP----IFLPSDAKYD---WLLAKIWVRSSDFHVHQTITH 385
>pdb|3V92|B Chain B, S663a Stable-5-Lox
pdb|3V92|A Chain A, S663a Stable-5-Lox
Length = 691
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 71/161 (44%), Gaps = 19/161 (11%)
Query: 398 WFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVE 457
W D F Q L G NP IR TE P K +TTE++E + +S+E
Sbjct: 244 WQEDLMFGYQFLNGANPVLIRRCTELPEKL------------PVTTEMVECSLERQLSLE 291
Query: 458 EAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMN 517
+ ++Q +FI+D+ L K L + + A + PIAI+L + P +
Sbjct: 292 QEVQQGNIFIVDFELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIPGD 351
Query: 518 GKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSH 558
P +FLPS + W LAK V + D HQ ++H
Sbjct: 352 ENP----IFLPSDAKYD---WLLAKIWVRSSDFHVHQTITH 385
>pdb|3O8Y|A Chain A, Stable-5-Lipoxygenase
pdb|3O8Y|B Chain B, Stable-5-Lipoxygenase
Length = 691
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 71/161 (44%), Gaps = 19/161 (11%)
Query: 398 WFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVE 457
W D F Q L G NP IR TE P K +TTE++E + +S+E
Sbjct: 244 WQEDLMFGYQFLNGANPVLIRRCTELPEKL------------PVTTEMVECSLERQLSLE 291
Query: 458 EAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMN 517
+ ++Q +FI+D+ L K L + + A + PIAI+L + P +
Sbjct: 292 QEVQQGNIFIVDFELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIPGD 351
Query: 518 GKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSH 558
P +FLPS + W LAK V + D HQ ++H
Sbjct: 352 ENP----IFLPSDAKYD---WLLAKIWVRSSDFHVHQTITH 385
>pdb|3VF1|A Chain A, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests
A Mechanism For Ca-Regulation
pdb|3VF1|B Chain B, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests
A Mechanism For Ca-Regulation
Length = 698
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 21/163 (12%)
Query: 397 FWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISV 456
+W D F Q L G NP IR + P + E++EK + ++
Sbjct: 250 YWRDDVWFGSQFLNGSNPEVIRRCDKLP------------ENFPVKNEMVEKLLDRGYTL 297
Query: 457 EEAIKQKKLFILDYHDL-FLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPP 515
E+A+K+ +FI DY L +P ++ + T +F+L + PIAI+L + P
Sbjct: 298 EKAMKEGLIFITDYKILEGIPTMDTPEDKRYITT--PLGLFYLKNNDDIIPIAIQLYQQP 355
Query: 516 MNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSH 558
W + TE W W +AK + D YHQ+++H
Sbjct: 356 GENNSIWTPL-----KDTE-WDWIMAKLWLRCADTQYHQMITH 392
>pdb|3DY5|A Chain A, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura
Homomalla
pdb|3DY5|C Chain C, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura
Homomalla
Length = 1066
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 73/194 (37%), Gaps = 38/194 (19%)
Query: 381 NILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESA 440
N +L TP DR W D F Q L G NP + P
Sbjct: 586 NWILGGTPNMADR----WHEDRWFGYQFLNGANPVILTRCDALP------------SNFP 629
Query: 441 ITTELIEKEIGGMISVEEAIKQKKLFILDY--------------HDLFLPYVEKVRQLKS 486
+T E + + +++E IK ++I+D+ D+ + ++ ++
Sbjct: 630 VTNEHVNASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEA 689
Query: 487 TTLYGSR--TIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAH 544
Y + +F++ G L PIAI++ + P P W H W +AK
Sbjct: 690 DIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPENPIWTP------HEENEHDWMMAKFW 743
Query: 545 VLAHDAGYHQLVSH 558
+ ++ +HQL +H
Sbjct: 744 LGVAESNFHQLNTH 757
>pdb|3FG4|A Chain A, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|B Chain B, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|C Chain C, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|D Chain D, Crystal Structure Of Delta413-417:gs I805a Lox
Length = 696
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 73/194 (37%), Gaps = 38/194 (19%)
Query: 381 NILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESA 440
N +L TP DR W D F Q L G NP + P
Sbjct: 216 NWILGGTPNMADR----WHEDRWFGYQFLNGANPVILTRCDALP------------SNFP 259
Query: 441 ITTELIEKEIGGMISVEEAIKQKKLFILDY--------------HDLFLPYVEKVRQLKS 486
+T E + + +++E IK ++I+D+ D+ + ++ ++
Sbjct: 260 VTNEHVNASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEA 319
Query: 487 TTLYGSR--TIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAH 544
Y + +F++ G L PIAI++ + P P W H W +AK
Sbjct: 320 DIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPENPIWTP------HEENEHDWMMAKFW 373
Query: 545 VLAHDAGYHQLVSH 558
+ ++ +HQL +H
Sbjct: 374 LGVAESNFHQLNTH 387
>pdb|3FG1|A Chain A, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|B Chain B, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|C Chain C, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|D Chain D, Crystal Structure Of Delta413-417:gs Lox
Length = 696
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 73/194 (37%), Gaps = 38/194 (19%)
Query: 381 NILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESA 440
N +L TP DR W D F Q L G NP + P
Sbjct: 216 NWILGGTPNMADR----WHEDRWFGYQFLNGANPVILTRCDALP------------SNFP 259
Query: 441 ITTELIEKEIGGMISVEEAIKQKKLFILDY--------------HDLFLPYVEKVRQLKS 486
+T E + + +++E IK ++I+D+ D+ + ++ ++
Sbjct: 260 VTNEHVNASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEA 319
Query: 487 TTLYGSR--TIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAH 544
Y + +F++ G L PIAI++ + P P W H W +AK
Sbjct: 320 DIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPENPIWTP------HEENEHDWMMAKFW 373
Query: 545 VLAHDAGYHQLVSH 558
+ ++ +HQL +H
Sbjct: 374 LGVAESNFHQLNTH 387
>pdb|3FG3|A Chain A, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|B Chain B, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|C Chain C, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|D Chain D, Crystal Structure Of Delta413-417:gs I805w Lox
Length = 696
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 73/194 (37%), Gaps = 38/194 (19%)
Query: 381 NILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESA 440
N +L TP DR W D F Q L G NP + P
Sbjct: 216 NWILGGTPNMADR----WHEDRWFGYQFLNGANPVILTRCDALP------------SNFP 259
Query: 441 ITTELIEKEIGGMISVEEAIKQKKLFILDY--------------HDLFLPYVEKVRQLKS 486
+T E + + +++E IK ++I+D+ D+ + ++ ++
Sbjct: 260 VTNEHVNASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEA 319
Query: 487 TTLYGSR--TIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAH 544
Y + +F++ G L PIAI++ + P P W H W +AK
Sbjct: 320 DIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPENPIWTP------HEENEHDWMMAKFW 373
Query: 545 VLAHDAGYHQLVSH 558
+ ++ +HQL +H
Sbjct: 374 LGVAESNFHQLNTH 387
>pdb|2FNQ|A Chain A, Insights From The X-Ray Crystal Structure Of Coral 8r-
Lipoxygenase: Calcium Activation Via A C2-Like Domain
And A Structural Basis Of Product Chirality
pdb|2FNQ|B Chain B, Insights From The X-Ray Crystal Structure Of Coral 8r-
Lipoxygenase: Calcium Activation Via A C2-Like Domain
And A Structural Basis Of Product Chirality
Length = 699
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 73/194 (37%), Gaps = 38/194 (19%)
Query: 381 NILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESA 440
N +L TP DR W D F Q L G NP + P
Sbjct: 219 NWILGGTPNMADR----WHEDRWFGYQFLNGANPVILTRCDALP------------SNFP 262
Query: 441 ITTELIEKEIGGMISVEEAIKQKKLFILDY--------------HDLFLPYVEKVRQLKS 486
+T E + + +++E IK ++I+D+ D+ + ++ ++
Sbjct: 263 VTNEHVNASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEA 322
Query: 487 TTLYGSR--TIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAH 544
Y + +F++ G L PIAI++ + P P W H W +AK
Sbjct: 323 DIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPENPIWTP------HEENEHDWMMAKFW 376
Query: 545 VLAHDAGYHQLVSH 558
+ ++ +HQL +H
Sbjct: 377 LGVAESNFHQLNTH 390
>pdb|1LOX|A Chain A, Rabbit Reticulocyte 15-Lipoxygenase
Length = 662
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 59/161 (36%), Gaps = 22/161 (13%)
Query: 398 WFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVE 457
W D F Q L G NP +R + P + PP +EKE+
Sbjct: 222 WQEDSLFGYQFLNGANPMLLRRSVQLPARLVF------PPGMEELQAQLEKEL------- 268
Query: 458 EAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMN 517
K LF D+ L V L + L P G L P+ I+L P +
Sbjct: 269 ---KAGTLFEADFA-LLDNIKANVILYCQQYLAAPLVMLKLQPDGKLMPMVIQLHLPKIG 324
Query: 518 GKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSH 558
P +FLP+ +W LAK V + D H+L SH
Sbjct: 325 SSP--PPLFLPT---DPPMVWLLAKCWVRSSDFQVHELNSH 360
>pdb|2P0M|A Chain A, Revised Structure Of Rabbit Reticulocyte 15s-Lipoxygenase
pdb|2P0M|B Chain B, Revised Structure Of Rabbit Reticulocyte 15s-Lipoxygenase
Length = 662
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 59/161 (36%), Gaps = 22/161 (13%)
Query: 398 WFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVE 457
W D F Q L G NP +R + P + PP +EKE+
Sbjct: 222 WQEDSLFGYQFLNGANPMLLRRSVQLPARLVF------PPGMEELQAQLEKEL------- 268
Query: 458 EAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMN 517
K LF D+ L V L + L P G L P+ I+L P +
Sbjct: 269 ---KAGTLFEADFA-LLDNIKANVILYCQQYLAAPLVMLKLQPDGKLMPMVIQLHLPKIG 324
Query: 518 GKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSH 558
P +FLP+ +W LAK V + D H+L SH
Sbjct: 325 SSP--PPLFLPT---DPPMVWLLAKCWVRSSDFQVHELNSH 360
>pdb|3RDE|A Chain A, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|B Chain B, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|C Chain C, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|D Chain D, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
Length = 573
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 75/196 (38%), Gaps = 33/196 (16%)
Query: 364 WNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEW 423
WN+L D+ + I + +R + W D F Q L G NP +R E
Sbjct: 108 WNSL---------DSFNRIFWSGQSKLAERVRDSWKEDALFGYQFLNGTNPMLLRHSVEL 158
Query: 424 PLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQ 483
P + + PP +EKE+ G LF D+ L ++
Sbjct: 159 PAR------LKFPPGMEELQAQLEKELQG----------GTLFEADFS--LLDGIKANVI 200
Query: 484 LKSTTLYGSRTIFF-LTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAK 542
L S + L P G L P+ I+L + P G P +FLP+ +W LAK
Sbjct: 201 LSSQQYLAVPLVMLKLQPDGKLLPMVIQL-QLPREGSPL-PPLFLPT---DPPMVWLLAK 255
Query: 543 AHVLAHDAGYHQLVSH 558
V + D H+L SH
Sbjct: 256 CWVRSSDFQLHELHSH 271
>pdb|3C5I|A Chain A, Crystal Structure Of Plasmodium Knowlesi Choline Kinase,
Pkh_134520
pdb|3C5I|B Chain B, Crystal Structure Of Plasmodium Knowlesi Choline Kinase,
Pkh_134520
pdb|3C5I|C Chain C, Crystal Structure Of Plasmodium Knowlesi Choline Kinase,
Pkh_134520
pdb|3C5I|D Chain D, Crystal Structure Of Plasmodium Knowlesi Choline Kinase,
Pkh_134520
Length = 369
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 17/108 (15%)
Query: 167 MYLKDIVLDGLPNGPVNVTCNSWLHSKHDN---KQKRVFFTNKLY---LPSQTPDGLKRY 220
+Y+K I L+ +P W H DN KQ TN+L+ L +T +
Sbjct: 15 LYIKKICLEKVP---------EWNHFTEDNLRVKQILSGLTNQLFEVGLKEETANNYNSI 65
Query: 221 RAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGK 268
R + R G+ + Y+ I +++VY + P+L GG+
Sbjct: 66 RTR--VLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTFNGGR 111
>pdb|2G9H|D Chain D, Crystal Structure Of Staphylococcal Enterotoxin I (Sei) In
Complex With A Human Mhc Class Ii Molecule
Length = 218
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 179 NGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPD-GLKRYRAEELTILRGNGQGERK 237
N + N W++ KH TNK + +Q D L+RY EE I N G+ K
Sbjct: 90 NSARKIPINLWVNGKHKTISTDKISTNKKLVTAQEIDVKLRRYLQEEYNIYGHNSTGKGK 149
Query: 238 TY 239
Y
Sbjct: 150 EY 151
>pdb|3EA6|A Chain A, Atomic Resolution Of Crystal Structure Of Sek
Length = 219
Score = 29.3 bits (64), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Query: 174 LDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPD-GLKRYRAEELTILRGNG 232
LD N P+N+ W++ H TNK ++ +Q D L++Y EE I NG
Sbjct: 89 LDKSRNIPINI----WINGNHKTISTNKVSTNKKFVTAQEIDVKLRKYLQEEYNIYGHNG 144
Query: 233 QGERKTY 239
+ + Y
Sbjct: 145 TKKGEEY 151
>pdb|2NTS|A Chain A, Crystal Structure Of Sek-Hvb5.1
pdb|2NTT|A Chain A, Crystal Structure Of Sek
pdb|2NTT|B Chain B, Crystal Structure Of Sek
Length = 217
Score = 28.9 bits (63), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Query: 174 LDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPD-GLKRYRAEELTILRGNG 232
LD N P+N+ W++ H TNK ++ +Q D L++Y EE I NG
Sbjct: 89 LDKSRNIPINI----WINGNHKTISTNKVSTNKKFVTAQEIDVKLRKYLQEEYNIYGHNG 144
Query: 233 QGERKTY 239
+ + Y
Sbjct: 145 TKKGEEY 151
>pdb|1Y4S|A Chain A, Conformation Rearrangement Of Heat Shock Protein 90 Upon
Adp Binding
pdb|1Y4S|B Chain B, Conformation Rearrangement Of Heat Shock Protein 90 Upon
Adp Binding
pdb|1Y4U|A Chain A, Conformation Rearrangement Of Heat Shock Protein 90 Upon
Adp Binding
pdb|1Y4U|B Chain B, Conformation Rearrangement Of Heat Shock Protein 90 Upon
Adp Binding
Length = 559
Score = 28.5 bits (62), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 159 VENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTP 214
+ +E +KE Y K I D N P+ +W H++ + KQ+ +T+ LY+PSQ P
Sbjct: 241 ITDEEYKEFY-KHIAHD--FNDPL-----TWSHNRVEGKQE---YTSLLYIPSQAP 285
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.138 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,675,941
Number of Sequences: 62578
Number of extensions: 796893
Number of successful extensions: 1797
Number of sequences better than 100.0: 36
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1682
Number of HSP's gapped (non-prelim): 38
length of query: 558
length of database: 14,973,337
effective HSP length: 104
effective length of query: 454
effective length of database: 8,465,225
effective search space: 3843212150
effective search space used: 3843212150
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)