Query 008661
Match_columns 558
No_of_seqs 393 out of 2309
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 08:46:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008661.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008661hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r83_A Synaptotagmin-1; C2A-C2 100.0 4.8E-37 1.7E-41 306.5 20.7 236 51-290 4-272 (284)
2 1dqv_A Synaptotagmin III; beta 100.0 1.1E-36 3.9E-41 307.9 14.9 237 51-291 5-276 (296)
3 2ep6_A MCTP2 protein; beta san 99.9 3.4E-22 1.2E-26 178.5 13.9 123 57-183 4-132 (133)
4 2dmh_A Myoferlin; beta-sandwic 99.9 3.2E-21 1.1E-25 173.1 16.2 122 64-186 5-136 (140)
5 1wfj_A Putative elicitor-respo 99.9 1.3E-21 4.6E-26 174.7 13.3 123 62-186 6-133 (136)
6 1rsy_A Synaptotagmin I; calciu 99.9 1.3E-21 4.6E-26 179.0 12.3 118 52-169 28-150 (152)
7 2z0u_A WW domain-containing pr 99.9 3.2E-22 1.1E-26 185.8 8.1 118 51-168 28-154 (155)
8 1rlw_A Phospholipase A2, CALB 99.9 1.4E-21 4.7E-26 172.2 11.6 117 65-182 2-124 (126)
9 3b7y_A E3 ubiquitin-protein li 99.9 4.6E-21 1.6E-25 174.8 14.7 120 62-183 16-153 (153)
10 2d8k_A Synaptotagmin VII; exoc 99.9 2.7E-21 9.4E-26 174.3 13.0 119 52-170 12-136 (141)
11 3kwu_A MUNC13-1; calcium bindi 99.9 1.3E-20 4.5E-25 170.9 16.5 114 65-182 16-146 (148)
12 3f04_A Synaptotagmin-1; C2A, c 99.9 2.2E-21 7.4E-26 175.1 11.4 118 52-169 20-142 (143)
13 1wfm_A Synaptotagmin XIII; C2 99.9 5.2E-21 1.8E-25 172.8 13.5 116 52-170 12-133 (138)
14 2fk9_A Protein kinase C, ETA t 99.8 2.9E-21 1E-25 180.8 11.9 116 62-182 25-156 (157)
15 3fbk_A RGS3, RGP3, regulator o 99.8 4.1E-21 1.4E-25 176.1 12.5 123 50-173 11-141 (153)
16 2bwq_A Regulating synaptic mem 99.8 4.4E-21 1.5E-25 169.6 11.7 116 52-168 4-129 (129)
17 3fdw_A Synaptotagmin-like prot 99.8 1.7E-21 5.7E-26 177.3 8.8 120 51-170 8-135 (148)
18 2b3r_A Phosphatidylinositol-4- 99.8 6.6E-21 2.3E-25 171.6 12.6 117 55-172 9-133 (134)
19 1v27_A Regulating synaptic mem 99.8 5E-21 1.7E-25 171.5 11.7 121 52-173 7-137 (141)
20 3m7f_B E3 ubiquitin-protein li 99.8 1.3E-20 4.3E-25 176.7 14.6 121 62-184 4-142 (176)
21 1gmi_A Protein kinase C, epsil 99.8 6.1E-21 2.1E-25 171.5 11.8 116 65-185 5-135 (136)
22 3rdl_A Protein kinase C alpha 99.8 3.8E-21 1.3E-25 171.5 9.6 120 52-174 4-129 (137)
23 2chd_A Rabphilin-3A, exophilin 99.8 5.9E-21 2E-25 172.0 10.5 119 51-169 14-140 (142)
24 2dmg_A KIAA1228 protein; beta- 99.8 9.1E-21 3.1E-25 170.8 10.7 119 51-170 9-136 (142)
25 1ugk_A Synaptotagmin IV, KIAA1 99.8 2.9E-20 9.8E-25 167.0 13.5 120 51-170 7-134 (138)
26 1a25_A CALB, protein kinase C 99.8 5E-21 1.7E-25 174.4 8.5 121 52-175 19-145 (149)
27 1rh8_A Piccolo protein; beta-s 99.8 2.8E-21 9.7E-26 173.8 6.5 118 52-171 6-140 (142)
28 2enp_A B/K protein; C2 type 1, 99.8 1.5E-20 5E-25 170.6 11.3 121 50-170 10-142 (147)
29 2q3x_A Regulating synaptic mem 99.8 3.2E-20 1.1E-24 173.8 12.7 115 52-170 18-140 (171)
30 3n5a_A Synaptotagmin-7; calciu 99.8 4.1E-20 1.4E-24 164.6 11.9 105 52-156 2-113 (138)
31 1tjx_A Similar to synaptotagmi 99.8 6.8E-20 2.3E-24 168.6 13.3 121 51-171 10-149 (159)
32 3pyc_A E3 ubiquitin-protein li 99.8 1E-19 3.5E-24 162.2 13.4 114 65-181 4-131 (132)
33 2cm5_A Rabphilin-3A; protein t 99.8 1.4E-19 4.8E-24 167.9 13.6 116 51-168 22-144 (166)
34 1w15_A Synaptotagmin IV; metal 99.8 1E-19 3.5E-24 166.1 9.3 116 52-169 16-138 (153)
35 2nq3_A Itchy homolog E3 ubiqui 99.8 3E-19 1E-23 168.8 11.5 119 63-184 33-162 (173)
36 3jzy_A Intersectin 2; C2 domai 99.7 2.1E-17 7.1E-22 177.5 13.3 119 63-182 384-507 (510)
37 2r83_A Synaptotagmin-1; C2A-C2 99.7 9.3E-17 3.2E-21 159.9 13.7 119 52-170 136-273 (284)
38 3nsj_A Perforin-1; pore formin 99.7 2.1E-16 7.3E-21 173.6 15.0 172 2-185 321-506 (540)
39 2cjt_A UNC-13 homolog A, MUNC1 99.6 1.1E-15 3.8E-20 137.8 12.5 87 64-158 3-91 (131)
40 1dqv_A Synaptotagmin III; beta 99.6 1E-16 3.5E-21 161.8 4.9 119 51-169 137-275 (296)
41 3l9b_A Otoferlin; C2-domain, b 99.6 2E-15 6.7E-20 139.4 11.5 115 67-186 22-143 (144)
42 2cjs_A UNC-13 homolog A, MUNC1 99.6 3.9E-15 1.3E-19 140.1 10.8 87 64-158 12-100 (167)
43 1cjy_A CPLA2, protein (cytosol 99.6 4.6E-15 1.6E-19 168.3 10.3 112 63-177 15-132 (749)
44 1djx_A PLC-D1, phosphoinositid 99.5 2.5E-14 8.7E-19 159.6 13.7 168 7-182 436-623 (624)
45 3n5a_A Synaptotagmin-7; calciu 99.5 6.9E-15 2.3E-19 130.7 5.1 114 172-289 2-137 (138)
46 3bxj_A RAS GTPase-activating p 99.5 2.9E-15 9.9E-20 162.3 0.8 114 65-185 10-159 (483)
47 1w15_A Synaptotagmin IV; metal 99.5 2.6E-14 8.7E-19 130.3 6.3 116 171-290 15-152 (153)
48 3pfq_A PKC-B, PKC-beta, protei 99.5 9E-14 3.1E-18 155.7 10.3 118 53-173 161-284 (674)
49 1tjx_A Similar to synaptotagmi 99.4 5.9E-14 2E-18 128.9 6.3 116 171-290 10-147 (159)
50 2cm5_A Rabphilin-3A; protein t 99.4 3.3E-13 1.1E-17 124.9 6.6 116 171-290 22-159 (166)
51 3ohm_B 1-phosphatidylinositol- 99.2 4.4E-11 1.5E-15 137.9 11.6 163 7-184 664-846 (885)
52 2zkm_X 1-phosphatidylinositol- 99.2 7.2E-11 2.5E-15 135.2 12.1 108 64-182 676-798 (799)
53 3qr0_A Phospholipase C-beta (P 99.2 1.3E-10 4.5E-15 133.1 13.5 110 65-185 649-773 (816)
54 1yrk_A NPKC-delta, protein kin 99.1 1.8E-09 6.2E-14 97.4 13.6 110 65-182 5-124 (126)
55 1wfm_A Synaptotagmin XIII; C2 99.0 1.1E-09 3.6E-14 98.6 10.5 60 188-252 41-101 (138)
56 2enj_A NPKC-theta, protein kin 99.0 2.2E-09 7.4E-14 98.2 12.5 111 65-183 9-130 (138)
57 2z0u_A WW domain-containing pr 99.0 1.1E-10 3.8E-15 108.0 1.9 79 171-252 28-123 (155)
58 2dmg_A KIAA1228 protein; beta- 98.9 1E-09 3.5E-14 98.4 4.9 77 171-252 9-102 (142)
59 3fbk_A RGS3, RGP3, regulator o 98.9 1.1E-09 3.6E-14 100.1 4.8 106 171-290 12-137 (153)
60 1ugk_A Synaptotagmin IV, KIAA1 98.9 2.7E-09 9.3E-14 95.3 6.8 76 172-253 8-102 (138)
61 2chd_A Rabphilin-3A, exophilin 98.9 8.5E-10 2.9E-14 98.9 3.6 104 171-278 14-141 (142)
62 3fdw_A Synaptotagmin-like prot 98.8 2.4E-09 8.3E-14 96.9 5.2 79 171-253 8-104 (148)
63 1v27_A Regulating synaptic mem 98.8 4.2E-09 1.4E-13 93.7 6.4 79 171-253 6-102 (141)
64 2bwq_A Regulating synaptic mem 98.8 5.5E-09 1.9E-13 91.7 5.1 78 172-253 4-99 (129)
65 3f04_A Synaptotagmin-1; C2A, c 98.7 3.3E-09 1.1E-13 95.2 3.1 77 171-253 19-112 (143)
66 1rsy_A Synaptotagmin I; calciu 98.7 3.7E-09 1.3E-13 96.2 3.2 77 171-253 27-120 (152)
67 2d8k_A Synaptotagmin VII; exoc 98.7 7.8E-09 2.7E-13 92.6 5.2 59 189-253 45-105 (141)
68 2enp_A B/K protein; C2 type 1, 98.6 1.3E-08 4.5E-13 91.7 3.8 57 190-252 53-110 (147)
69 3rdl_A Protein kinase C alpha 98.5 8.4E-08 2.9E-12 84.8 5.9 61 189-253 35-95 (137)
70 1a25_A CALB, protein kinase C 98.5 1.1E-07 3.8E-12 85.9 5.1 61 189-253 50-110 (149)
71 1rh8_A Piccolo protein; beta-s 98.4 4E-08 1.4E-12 87.7 1.3 64 189-253 37-108 (142)
72 2b3r_A Phosphatidylinositol-4- 98.4 1.7E-07 5.9E-12 83.7 5.2 78 172-253 19-100 (134)
73 2q3x_A Regulating synaptic mem 98.4 1.5E-07 5.2E-12 87.6 4.7 59 189-253 50-109 (171)
74 1rlw_A Phospholipase A2, CALB 98.3 1.1E-06 3.7E-11 76.6 7.0 75 172-253 2-82 (126)
75 2dmh_A Myoferlin; beta-sandwic 98.2 3.1E-06 1E-10 75.2 8.0 73 172-253 6-82 (140)
76 3pyc_A E3 ubiquitin-protein li 98.2 2.7E-06 9.1E-11 75.1 7.1 55 188-253 23-78 (132)
77 3b7y_A E3 ubiquitin-protein li 98.2 5.4E-06 1.8E-10 74.9 8.7 79 170-253 17-98 (153)
78 2fk9_A Protein kinase C, ETA t 98.1 2E-06 6.8E-11 80.2 5.5 53 189-252 58-110 (157)
79 1gmi_A Protein kinase C, epsil 98.1 1.7E-06 5.7E-11 77.1 4.7 52 190-252 37-88 (136)
80 3m7f_B E3 ubiquitin-protein li 98.1 7.3E-06 2.5E-10 76.2 8.2 78 171-253 6-86 (176)
81 2ep6_A MCTP2 protein; beta san 98.1 8.7E-06 3E-10 71.9 8.3 72 171-253 11-85 (133)
82 2cjt_A UNC-13 homolog A, MUNC1 98.0 8E-06 2.7E-10 73.1 7.5 67 172-251 4-71 (131)
83 2nq3_A Itchy homolog E3 ubiqui 98.0 9.8E-06 3.4E-10 76.1 7.5 70 172-253 35-107 (173)
84 1wfj_A Putative elicitor-respo 98.0 1E-05 3.6E-10 71.4 6.8 71 171-252 8-82 (136)
85 3kwu_A MUNC13-1; calcium bindi 97.9 1.7E-05 5.7E-10 71.2 7.6 70 172-252 16-88 (148)
86 3nsj_A Perforin-1; pore formin 97.8 4.2E-05 1.4E-09 84.2 9.2 91 173-272 394-489 (540)
87 2cjs_A UNC-13 homolog A, MUNC1 97.7 3.9E-05 1.3E-09 71.8 6.5 67 172-251 13-80 (167)
88 3l9b_A Otoferlin; C2-domain, b 97.5 0.00012 4.1E-09 67.6 5.6 74 177-259 23-101 (144)
89 3pfq_A PKC-B, PKC-beta, protei 97.4 0.0001 3.5E-09 82.5 6.0 62 188-253 190-251 (674)
90 1cjy_A CPLA2, protein (cytosol 97.4 0.00018 6E-09 82.0 6.6 77 170-253 15-97 (749)
91 3jzy_A Intersectin 2; C2 domai 97.3 0.0003 1E-08 75.2 7.3 72 172-253 386-460 (510)
92 1djx_A PLC-D1, phosphoinositid 97.2 0.00043 1.5E-08 77.4 7.1 60 188-253 517-578 (624)
93 2zkm_X 1-phosphatidylinositol- 96.6 0.0035 1.2E-07 72.0 8.2 75 172-251 677-755 (799)
94 3bxj_A RAS GTPase-activating p 96.5 0.00051 1.7E-08 74.3 0.4 49 191-249 27-78 (483)
95 3qr0_A Phospholipase C-beta (P 96.1 0.0078 2.7E-07 69.3 7.8 58 190-251 666-727 (816)
96 3ohm_B 1-phosphatidylinositol- 96.0 0.0056 1.9E-07 71.0 5.9 74 176-251 726-801 (885)
97 1yrk_A NPKC-delta, protein kin 88.4 2 6.8E-05 38.7 8.8 68 173-248 6-77 (126)
98 3l4c_A Dedicator of cytokinesi 88.1 3.3 0.00011 40.6 10.9 56 98-153 77-138 (220)
99 2wxf_A Phosphatidylinositol-4, 86.0 2.5 8.4E-05 49.5 10.1 103 65-181 216-339 (940)
100 2enj_A NPKC-theta, protein kin 84.0 2.7 9.1E-05 38.4 7.3 68 173-248 10-82 (138)
101 3hhm_A Phosphatidylinositol-4, 82.0 5.7 0.0002 47.1 11.0 103 65-180 354-469 (1091)
102 2y3a_A Phosphatidylinositol-4, 71.0 4.1 0.00014 48.4 5.7 71 65-138 352-430 (1092)
103 1e7u_A Phosphatidylinositol 3- 67.1 18 0.0006 42.5 9.8 104 66-181 218-345 (961)
104 2yrb_A Protein fantom; beta sa 59.8 17 0.00057 33.7 6.4 121 61-183 13-150 (156)
No 1
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=100.00 E-value=4.8e-37 Score=306.53 Aligned_cols=236 Identities=24% Similarity=0.352 Sum_probs=200.5
Q ss_pred CCCCceeEeeecCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC---eEEEeeeecCCCCCccceEEEEeeccCC-C
Q 008661 51 PQPGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGP---YRFRTKTQRKTLSPKWHEEFNIPISTWD-S 126 (558)
Q Consensus 51 ~~~~l~fSL~Yd~~~G~L~VtVieArdL~~~D~~G~sDPYVkV~Lgp---~k~KTkVikkTlNPvWnEtF~F~V~~~e-~ 126 (558)
..|+++|++.|+...+.|.|+|++|++|+++|..+.+||||++++++ ..++|+++++|+||+|||+|.|.+...+ .
T Consensus 4 ~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~ 83 (284)
T 2r83_A 4 KLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELA 83 (284)
T ss_dssp CCCEEEEEEEEETTTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCT
T ss_pred ceeEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhC
Confidence 35789999999999999999999999999999999999999999965 5789999999999999999999987533 3
Q ss_pred CceEEEEEeecCCCC-CCccEEEEEecccccCCCceeeeeecCCC------CceEEEEEEEEEeccCC------------
Q 008661 127 PNVLVIEVRDKDHFV-DDTLGDCTINISDLRDGQRHDMWIPLQNI------KIGRLHLAITVLEESAK------------ 187 (558)
Q Consensus 127 ~~tL~V~V~D~D~~s-DDfIGev~IpL~eL~~~~~~e~W~~L~~k------~~GeL~LsL~y~p~~~~------------ 187 (558)
...|.|+|||+|.++ +++||++.++|..+..+.....|++|... ..|+|++.+.|.+....
T Consensus 84 ~~~l~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~G~i~l~l~~~p~~~~l~v~v~~a~~L~ 163 (284)
T 2r83_A 84 GKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRYVPTAGKLTVVILEAKNLK 163 (284)
T ss_dssp TCEEEEEEEECCSSSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSCCCCCCCEEEEEEEEETTTTEEEEEEEEEESCC
T ss_pred cCEEEEEEEECCCCCCCceeEEEEEcchhcccCCcceeEEEeeccccccccccccEEEEEEecCcCCceEEEEEEeECCC
Confidence 569999999999997 99999999999999888888999999752 46999999999876543
Q ss_pred ----CCCCCCcceEEecccCCCCceeeEEEeEecCCCCCCccCCCceeec-CCCCCCCCceEEEEEeccC--cccc-ceE
Q 008661 188 ----QGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSV-SSEKSPKVADNFEPINIEG--QQET-GIW 259 (558)
Q Consensus 188 ----l~lsDPyVKv~L~~~~~~~krlkKKKT~VkK~TlNPvwN~E~F~Fe-p~e~l~~v~leveV~D~dG--~~e~-Gv~ 259 (558)
.+.+||||++++.. .+++..++||.++++|+||+|| |.|.|. +.+++....+.|+|||++. .++. |..
T Consensus 164 ~~d~~~~~dpyv~v~~~~---~~~~~~~~kT~v~~~t~nP~wn-e~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~ 239 (284)
T 2r83_A 164 KMDVGGLSDPYVKIHLMQ---NGKRLKKKKTTIKKNTLNPYYN-ESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKV 239 (284)
T ss_dssp CCSTTSCCCEEEEEEEEE---TTEEEEEEECCCCCSCSSCEEE-EEEEEECCTTTGGGEEEEEEEEECCSSSCCCEEEEE
T ss_pred CcCCCCCcCeEEEEEEEe---CCcEeeeeccceecCCCCCEEc-eeEEEeCCHHHhCceEEEEEEEeCCCCCCCcEEEEE
Confidence 13479999999954 3567788999999999999999 999999 7777777889999999984 4443 654
Q ss_pred -EecCCc-cccccCccccCCCCCcccceeecCC
Q 008661 260 -VHQPGS-EVAQTWEPRKGKNRRLDTLVRRVPN 290 (558)
Q Consensus 260 -v~~pgt-~~~~hW~~~l~~~r~~~~q~~~~~~ 290 (558)
+..... ...+||.+|+.+||+++++||.+-.
T Consensus 240 ~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~ 272 (284)
T 2r83_A 240 FVGYNSTGAELRHWSDMLANPRRPIAQWHTLQV 272 (284)
T ss_dssp EEETTCCHHHHHHHHHHHHSTTSCEEEEEECBC
T ss_pred EECCCCCCcHHHHHHHHHHCCCCchheeeecCC
Confidence 332222 2349999999999999999998863
No 2
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=100.00 E-value=1.1e-36 Score=307.93 Aligned_cols=237 Identities=21% Similarity=0.345 Sum_probs=194.7
Q ss_pred CCCCceeEeeecCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEeC---CeEEEeeeecCCCCCccceEEEEeeccCC-C
Q 008661 51 PQPGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLG---PYRFRTKTQRKTLSPKWHEEFNIPISTWD-S 126 (558)
Q Consensus 51 ~~~~l~fSL~Yd~~~G~L~VtVieArdL~~~D~~G~sDPYVkV~Lg---p~k~KTkVikkTlNPvWnEtF~F~V~~~e-~ 126 (558)
..|.+.|+|.|+...+.|.|+|++|++|+.+|..|.+||||++++. ..+++|+++++|+||+|||+|.|.+...+ .
T Consensus 5 ~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~ 84 (296)
T 1dqv_A 5 PCGRISFALRYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELA 84 (296)
T ss_dssp SSCEEEEEEECCSSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGS
T ss_pred eeeEEEEEEEEeCCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhc
Confidence 3578999999999999999999999999999999999999999994 47889999999999999999999987432 2
Q ss_pred CceEEEEEeecCCCC-CCccEEEEEe-cccccC-CCceeeeeecCC-----CCceEEEEEEEEEeccCC-----------
Q 008661 127 PNVLVIEVRDKDHFV-DDTLGDCTIN-ISDLRD-GQRHDMWIPLQN-----IKIGRLHLAITVLEESAK----------- 187 (558)
Q Consensus 127 ~~tL~V~V~D~D~~s-DDfIGev~Ip-L~eL~~-~~~~e~W~~L~~-----k~~GeL~LsL~y~p~~~~----------- 187 (558)
...|.|+|||+|.++ +++||++.++ |..+.. ......|++|.. ...|+|++.++|.+..+.
T Consensus 85 ~~~L~~~V~d~d~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~vsl~y~~~~~~l~v~v~~a~~L 164 (296)
T 1dqv_A 85 QRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSEKADLGELNFSLCYLPTAGLLTVTIIKASNL 164 (296)
T ss_dssp SCCCEEEEEECCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSSCCSCCCEEEEEEEEETTTTEEEEEEEEEESC
T ss_pred CCEEEEEEEEcCCCCCCceEEEEEeccccccccCCccceeeeccccccccccccceEEEEEEeccccceeEEEEEEeecC
Confidence 458999999999997 9999999996 444433 345678999964 246999999999886543
Q ss_pred -----CCCCCCcceEEecccCCCCceeeEEEeEecCCCCCCccCCCceeec-CCCCCCCCceEEEEEeccC--cccc-ce
Q 008661 188 -----QGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSV-SSEKSPKVADNFEPINIEG--QQET-GI 258 (558)
Q Consensus 188 -----l~lsDPyVKv~L~~~~~~~krlkKKKT~VkK~TlNPvwN~E~F~Fe-p~e~l~~v~leveV~D~dG--~~e~-Gv 258 (558)
.+.+||||++++.. ++++.+++||.++++|+||+|| |.|.|. +.+.+....+.|+|||++. .++. |.
T Consensus 165 ~~~d~~g~~Dpyv~v~l~~---~~~~~~~~kT~v~~~t~nP~wn-e~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~ 240 (296)
T 1dqv_A 165 KAMDLTGFSDPYVKASLIS---EGRRLKKRKTSIKKNTLNPTYN-EALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGV 240 (296)
T ss_dssp CCCSSSSCCCEEEEECCCT---TCCTTSCEECCCCCSCSSCEEE-ECCCCCCCSGGGGSCCCCCEEEECCSSSCCEEEEE
T ss_pred CccCCCCCCCcEEEEEEEe---CCcCccceecceecCCCCCeEC-ceEEEEcCHHHccCcEEEEEEEeCCCCCCCceEEE
Confidence 23379999999943 4566788999999999999999 999999 6667777899999999984 4443 54
Q ss_pred E-E--ecCCccccccCccccCCCCCcccceeecCCC
Q 008661 259 W-V--HQPGSEVAQTWEPRKGKNRRLDTLVRRVPNG 291 (558)
Q Consensus 259 ~-v--~~pgt~~~~hW~~~l~~~r~~~~q~~~~~~~ 291 (558)
. + ..-+....+||.+|+.+||+|+++||.+...
T Consensus 241 ~~i~l~~~~~~~~~~W~~~~~~~~~~~~~w~~L~~~ 276 (296)
T 1dqv_A 241 CRVGPEAADPHGREHWAEMLANPRKPVEHWHQLVEE 276 (296)
T ss_dssp CCCSSCTTCHHHHHHHHTSSSSSSSCSCSCCCCBBC
T ss_pred EEECCccCCchhHHHHHHHHhCCCCceeEeeeccCc
Confidence 4 2 2222224589999999999999999998854
No 3
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.88 E-value=3.4e-22 Score=178.52 Aligned_cols=123 Identities=31% Similarity=0.465 Sum_probs=111.4
Q ss_pred eEeeecCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEeCCeEEEeeeecCCCCCccceEEEEeeccCCCCceEEEEEee
Q 008661 57 FSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGPYRFRTKTQRKTLSPKWHEEFNIPISTWDSPNVLVIEVRD 136 (558)
Q Consensus 57 fSL~Yd~~~G~L~VtVieArdL~~~D~~G~sDPYVkV~Lgp~k~KTkVikkTlNPvWnEtF~F~V~~~e~~~tL~V~V~D 136 (558)
.++.|..+.+.|+|+|++|++|++++..|.+||||++++++.+++|+++++|+||+|||+|.|.+.. ....|.|+|||
T Consensus 4 ~s~~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~--~~~~l~i~V~d 81 (133)
T 2ep6_A 4 GSSGDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKD--IHDVLEVTVFD 81 (133)
T ss_dssp CCCCSCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESC--TTCEEEEEEEE
T ss_pred ccccccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecC--CCCEEEEEEEE
Confidence 3567899999999999999999999999999999999999999999999999999999999999985 35789999999
Q ss_pred cCCCC-CCccEEEEEecccccCCCceeeeeecCC-----CCceEEEEEEEEEe
Q 008661 137 KDHFV-DDTLGDCTINISDLRDGQRHDMWIPLQN-----IKIGRLHLAITVLE 183 (558)
Q Consensus 137 ~D~~s-DDfIGev~IpL~eL~~~~~~e~W~~L~~-----k~~GeL~LsL~y~p 183 (558)
+|.++ +++||++.|+|.++..+ ...|++|.. ...|+|+|+++|..
T Consensus 82 ~d~~~~~~~lG~~~i~l~~l~~~--~~~w~~L~~~~~~~~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 82 EDGDKPPDFLGKVAIPLLSIRDG--QPNCYVLKNKDLEQAFKGVIYLEMDLIY 132 (133)
T ss_dssp EETTEEEEECCBCEEEGGGCCSS--CCEECCCBCSCTTSCCSSEEEEEEEEEE
T ss_pred CCCCCCCCeeEEEEEEHHHccCC--CceEEEeecCCCCCccceEEEEEEEEEe
Confidence 99997 99999999999999764 358999975 25699999999875
No 4
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.86 E-value=3.2e-21 Score=173.14 Aligned_cols=122 Identities=24% Similarity=0.296 Sum_probs=108.8
Q ss_pred CceEEEEEEEEecCCCCCCCCCCCCcEEEEEeCCeEEEeeeecCCCCCccceEEEEeeccCC--CCceEEEEEeecCCCC
Q 008661 64 PVAYARVEVVEASDMKPSDLNGLADPYVKGQLGPYRFRTKTQRKTLSPKWHEEFNIPISTWD--SPNVLVIEVRDKDHFV 141 (558)
Q Consensus 64 ~~G~L~VtVieArdL~~~D~~G~sDPYVkV~Lgp~k~KTkVikkTlNPvWnEtF~F~V~~~e--~~~tL~V~V~D~D~~s 141 (558)
..+.|.|+|++|++|+.++. +.+||||+++++..+++|+++++++||+|||+|.|.+...+ ....|.|+|||+|.++
T Consensus 5 ~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~~~ 83 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTKF-GKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFETIG 83 (140)
T ss_dssp BCCEEEEEEEEEESCCCCSS-SCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTCSS
T ss_pred CCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCCCC
Confidence 46899999999999999998 99999999999999999999999999999999999997432 3579999999999997
Q ss_pred -CCccEEEEEecccccCCCceeeeee---cCCC----CceEEEEEEEEEeccC
Q 008661 142 -DDTLGDCTINISDLRDGQRHDMWIP---LQNI----KIGRLHLAITVLEESA 186 (558)
Q Consensus 142 -DDfIGev~IpL~eL~~~~~~e~W~~---L~~k----~~GeL~LsL~y~p~~~ 186 (558)
+++||++.|+|.++..+.....|+. |.+. ..|+|+|+++|.+.+.
T Consensus 84 ~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p~~~ 136 (140)
T 2dmh_A 84 QNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDTGATIDLVIGYDPPSG 136 (140)
T ss_dssp SCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEEEEEEEEEEEECCCBS
T ss_pred CCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCCCCEEEEEEEEECCCC
Confidence 8999999999999988888899988 6442 3599999999998653
No 5
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.86 E-value=1.3e-21 Score=174.73 Aligned_cols=123 Identities=21% Similarity=0.321 Sum_probs=110.1
Q ss_pred cCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEeCCeEEEeeeec-CCCCCccceEEEEeeccCCCCceEEEEEeecCCC
Q 008661 62 KEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGPYRFRTKTQR-KTLSPKWHEEFNIPISTWDSPNVLVIEVRDKDHF 140 (558)
Q Consensus 62 d~~~G~L~VtVieArdL~~~D~~G~sDPYVkV~Lgp~k~KTkVik-kTlNPvWnEtF~F~V~~~e~~~tL~V~V~D~D~~ 140 (558)
..+.+.|+|+|++|++|+.++..+.+||||++++++.+++|++++ +++||+|||+|.|.+.. ....|.|+|||++.+
T Consensus 6 ~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~--~~~~l~~~V~d~~~~ 83 (136)
T 1wfj_A 6 SGPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSE--GTTELKAKIFDKDVG 83 (136)
T ss_dssp CCCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEES--SCCEEEEEECCSSSC
T ss_pred CCCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECC--CCCEEEEEEEECCCC
Confidence 346799999999999999999999999999999999999999998 99999999999999986 467999999999998
Q ss_pred C-CCccEEEEEecccc-cCCCceeeeeecC--CCCceEEEEEEEEEeccC
Q 008661 141 V-DDTLGDCTINISDL-RDGQRHDMWIPLQ--NIKIGRLHLAITVLEESA 186 (558)
Q Consensus 141 s-DDfIGev~IpL~eL-~~~~~~e~W~~L~--~k~~GeL~LsL~y~p~~~ 186 (558)
+ |++||++.|+|.++ ..+.....||+|. ....|+|+|+++|.+...
T Consensus 84 ~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~~G~i~l~l~~~p~~~ 133 (136)
T 1wfj_A 84 TEDDAVGEATIPLEPVFVEGSIPPTAYNVVKDEEYKGEIWVALSFKPSGP 133 (136)
T ss_dssp TTTCCSEEEEEESHHHHHHSEEEEEEEEEEETTEEEEEEEEEEEEEECCS
T ss_pred CCCceEEEEEEEHHHhccCCCCCcEEEEeecCCccCEEEEEEEEEEeCCC
Confidence 7 99999999999998 4455578899996 235799999999999764
No 6
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.86 E-value=1.3e-21 Score=178.96 Aligned_cols=118 Identities=30% Similarity=0.490 Sum_probs=107.5
Q ss_pred CCCceeEeeecCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC---eEEEeeeecCCCCCccceEEEEeeccCC-CC
Q 008661 52 QPGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGP---YRFRTKTQRKTLSPKWHEEFNIPISTWD-SP 127 (558)
Q Consensus 52 ~~~l~fSL~Yd~~~G~L~VtVieArdL~~~D~~G~sDPYVkV~Lgp---~k~KTkVikkTlNPvWnEtF~F~V~~~e-~~ 127 (558)
.|+++++|.|+...+.|+|+|++|++|+.++..+.+||||++++.+ .+++|+++++|+||+|||+|.|.+...+ ..
T Consensus 28 ~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~ 107 (152)
T 1rsy_A 28 LGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGG 107 (152)
T ss_dssp CCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTT
T ss_pred ceEEEEEEEEeCCCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCC
Confidence 5789999999999999999999999999999999999999999953 6789999999999999999999986422 25
Q ss_pred ceEEEEEeecCCCC-CCccEEEEEecccccCCCceeeeeecCC
Q 008661 128 NVLVIEVRDKDHFV-DDTLGDCTINISDLRDGQRHDMWIPLQN 169 (558)
Q Consensus 128 ~tL~V~V~D~D~~s-DDfIGev~IpL~eL~~~~~~e~W~~L~~ 169 (558)
..|.|+|||+|.++ +++||++.|+|..+..+...+.|++|.+
T Consensus 108 ~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 108 KTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp CEEEEEEEECCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred CEEEEEEEECCCCCCCcEEEEEEEEchhccCCCCcceEEECCC
Confidence 78999999999997 9999999999999988888899999975
No 7
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.86 E-value=3.2e-22 Score=185.75 Aligned_cols=118 Identities=16% Similarity=0.228 Sum_probs=105.9
Q ss_pred CCCCceeEeeecCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC------eEEEeeeecCCCCCccceEEEEeeccC
Q 008661 51 PQPGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGP------YRFRTKTQRKTLSPKWHEEFNIPISTW 124 (558)
Q Consensus 51 ~~~~l~fSL~Yd~~~G~L~VtVieArdL~~~D~~G~sDPYVkV~Lgp------~k~KTkVikkTlNPvWnEtF~F~V~~~ 124 (558)
..++++|+|.|+...+.|+|+|++|++|+++|.+|.+||||++++.+ .++||+++++|+||+|||+|.|.+...
T Consensus 28 ~~G~l~~sl~y~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~ 107 (155)
T 2z0u_A 28 GATRIQIALKYDEKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYP 107 (155)
T ss_dssp CCEEEEEEEEEETTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHH
T ss_pred CcEEEEEEEEEcCCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHH
Confidence 35788999999999999999999999999999999999999999976 278999999999999999999998742
Q ss_pred C-CCceEEEEEeecCCCC-CCccEEEEEeccccc-CCCceeeeeecC
Q 008661 125 D-SPNVLVIEVRDKDHFV-DDTLGDCTINISDLR-DGQRHDMWIPLQ 168 (558)
Q Consensus 125 e-~~~tL~V~V~D~D~~s-DDfIGev~IpL~eL~-~~~~~e~W~~L~ 168 (558)
+ ....|.|+|||+|.++ +++||++.|+|.++. .+.....||+|.
T Consensus 108 ~l~~~~L~~~V~d~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 108 ALHQKTLRVDVCTTDRSHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp HHHHCEEEEEEEEECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred HhCcCEEEEEEEECCCCCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 2 2468999999999998 999999999999995 356788999986
No 8
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.86 E-value=1.4e-21 Score=172.19 Aligned_cols=117 Identities=25% Similarity=0.419 Sum_probs=103.5
Q ss_pred ceEEEEEEEEecCCCCC---CCCCCCCcEEEEEeCC---eEEEeeeecCCCCCccceEEEEeeccCCCCceEEEEEeecC
Q 008661 65 VAYARVEVVEASDMKPS---DLNGLADPYVKGQLGP---YRFRTKTQRKTLSPKWHEEFNIPISTWDSPNVLVIEVRDKD 138 (558)
Q Consensus 65 ~G~L~VtVieArdL~~~---D~~G~sDPYVkV~Lgp---~k~KTkVikkTlNPvWnEtF~F~V~~~e~~~tL~V~V~D~D 138 (558)
.+.|+|+|++|++|+.+ +..|.+||||++++++ .+++|+++++|+||+|||+|.|.+... ....|.|+|||+|
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~~~l~i~V~d~d 80 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPN-QENVLEITLMDAN 80 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTT-SCCEEEEEEEECC
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCC-CCCEEEEEEEECC
Confidence 47899999999999984 5678999999999986 788999999999999999999999642 4679999999999
Q ss_pred CCCCCccEEEEEecccccCCCceeeeeecCCCCceEEEEEEEEE
Q 008661 139 HFVDDTLGDCTINISDLRDGQRHDMWIPLQNIKIGRLHLAITVL 182 (558)
Q Consensus 139 ~~sDDfIGev~IpL~eL~~~~~~e~W~~L~~k~~GeL~LsL~y~ 182 (558)
.+++++||++.|+|.++..+.....|++|.+...|.|+|++...
T Consensus 81 ~~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~~~~g~i~~~le~~ 124 (126)
T 1rlw_A 81 YVMDETLGTATFTVSSMKVGEKKEVPFIFNQVTEMVLEMSLEVA 124 (126)
T ss_dssp SSCCEEEEEEEEEGGGSCTTCEEEEEEEETTTEEEEEEEEEECC
T ss_pred CCCCceeEEEEEEHHHccCCCcEEEEEEcCCCceEEEEEEEEeC
Confidence 98899999999999999988889999999987677777776543
No 9
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.85 E-value=4.6e-21 Score=174.81 Aligned_cols=120 Identities=30% Similarity=0.429 Sum_probs=99.4
Q ss_pred cCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC------eEEEeeeecCCCCCccceEEEEeeccCCCCceEEEEEe
Q 008661 62 KEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGP------YRFRTKTQRKTLSPKWHEEFNIPISTWDSPNVLVIEVR 135 (558)
Q Consensus 62 d~~~G~L~VtVieArdL~~~D~~G~sDPYVkV~Lgp------~k~KTkVikkTlNPvWnEtF~F~V~~~e~~~tL~V~V~ 135 (558)
....+.|+|+|++|++|+.++..|.+||||++++.+ ..++|+++++|+||+|||+|.|.+.. ....|.|+||
T Consensus 16 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~--~~~~l~~~V~ 93 (153)
T 3b7y_A 16 EENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHP--QQHRLLFEVF 93 (153)
T ss_dssp CTTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECT--TTCEEEEEEE
T ss_pred CCCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecC--CCCEEEEEEE
Confidence 456789999999999999999889999999999974 57899999999999999999999985 3578999999
Q ss_pred ecCCCC-CCccEEEEEecccccCCCce------eeeeecCCC-----CceEEEEEEEEEe
Q 008661 136 DKDHFV-DDTLGDCTINISDLRDGQRH------DMWIPLQNI-----KIGRLHLAITVLE 183 (558)
Q Consensus 136 D~D~~s-DDfIGev~IpL~eL~~~~~~------e~W~~L~~k-----~~GeL~LsL~y~p 183 (558)
|++.++ +++||++.|+|.++..+... ..||+|... ..|+|+|+++|.|
T Consensus 94 d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 94 DENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLP 153 (153)
T ss_dssp ECCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEECC
T ss_pred ECCCCcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEEeC
Confidence 999997 99999999999999776543 589999652 4699999999975
No 10
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=2.7e-21 Score=174.28 Aligned_cols=119 Identities=28% Similarity=0.487 Sum_probs=107.2
Q ss_pred CCCceeEeeecCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC---eEEEeeeecCCCCCccceEEEEeeccCC--C
Q 008661 52 QPGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGP---YRFRTKTQRKTLSPKWHEEFNIPISTWD--S 126 (558)
Q Consensus 52 ~~~l~fSL~Yd~~~G~L~VtVieArdL~~~D~~G~sDPYVkV~Lgp---~k~KTkVikkTlNPvWnEtF~F~V~~~e--~ 126 (558)
.|.+++++.|....+.|+|+|++|++|+.++..+.+||||++++.+ .+++|+++++|+||+|||+|.|.+...+ .
T Consensus 12 ~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~ 91 (141)
T 2d8k_A 12 LGRIQFSVGYNFQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVV 91 (141)
T ss_dssp CCEEEEEEEECSSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHT
T ss_pred eeEEEEEEEEeCCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcc
Confidence 5789999999999999999999999999999999999999999953 6889999999999999999999863211 3
Q ss_pred CceEEEEEeecCCCC-CCccEEEEEecccccCCCceeeeeecCCC
Q 008661 127 PNVLVIEVRDKDHFV-DDTLGDCTINISDLRDGQRHDMWIPLQNI 170 (558)
Q Consensus 127 ~~tL~V~V~D~D~~s-DDfIGev~IpL~eL~~~~~~e~W~~L~~k 170 (558)
...|.|+|||++.++ +++||++.|+|.++..+.....|++|.+.
T Consensus 92 ~~~l~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 136 (141)
T 2d8k_A 92 QRILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPS 136 (141)
T ss_dssp TSEEEEEEEECCSSSSCEEEEEEEEETTTSCTTSCEEEEECCEEC
T ss_pred cCEEEEEEEECCCCCCCcEEEEEEEEhhhhcCCCCccEEEECcCC
Confidence 568999999999987 99999999999999988888999999864
No 11
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.85 E-value=1.3e-20 Score=170.91 Aligned_cols=114 Identities=33% Similarity=0.511 Sum_probs=103.3
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEeCCeEEEeeeecCCCCCccceEEEEeeccCCCCceEEEEEeecCCC----
Q 008661 65 VAYARVEVVEASDMKPSDLNGLADPYVKGQLGPYRFRTKTQRKTLSPKWHEEFNIPISTWDSPNVLVIEVRDKDHF---- 140 (558)
Q Consensus 65 ~G~L~VtVieArdL~~~D~~G~sDPYVkV~Lgp~k~KTkVikkTlNPvWnEtF~F~V~~~e~~~tL~V~V~D~D~~---- 140 (558)
.+.|+|+|++|++|+++|..|.+||||+++++..+++|+++++|+||.|||+|.|.+.. ....|.|+|||+|.+
T Consensus 16 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~--~~~~l~~~v~d~d~~~~~~ 93 (148)
T 3kwu_A 16 SAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHN--SSDRIKVRVLDEDDDIKSR 93 (148)
T ss_dssp CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECS--TTCEEEEEEEECCCSHHHH
T ss_pred ccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecC--CCCEEEEEEEECCCCcccc
Confidence 58999999999999999999999999999999999999999999999999999999975 347899999999986
Q ss_pred -------C-CCccEEEEEecccccCCCceeeeeecCCC-----CceEEEEEEEEE
Q 008661 141 -------V-DDTLGDCTINISDLRDGQRHDMWIPLQNI-----KIGRLHLAITVL 182 (558)
Q Consensus 141 -------s-DDfIGev~IpL~eL~~~~~~e~W~~L~~k-----~~GeL~LsL~y~ 182 (558)
+ +++||++.|+|.++ ......|++|... ..|+|+|+|+|.
T Consensus 94 ~~~~~~~~~~~~lG~~~i~l~~l--~~~~~~w~~L~~~~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 94 VKQRFKRESDDFLGQTIIEVRTL--SGEMDVWYNLDKRTDKSAVSGAIRLHISVE 146 (148)
T ss_dssp HHTTTSSCSSEEEEEEEEEGGGC--CSEEEEEEECBCSSTTCCCCCEEEEEEEEE
T ss_pred ccccccCCCCccEEEEEEEHHHC--cCCCCEEEEcccCCCCCCCceEEEEEEEEE
Confidence 5 99999999999998 3457899999852 469999999985
No 12
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.85 E-value=2.2e-21 Score=175.07 Aligned_cols=118 Identities=30% Similarity=0.490 Sum_probs=107.5
Q ss_pred CCCceeEeeecCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC---eEEEeeeecCCCCCccceEEEEeeccCC-CC
Q 008661 52 QPGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGP---YRFRTKTQRKTLSPKWHEEFNIPISTWD-SP 127 (558)
Q Consensus 52 ~~~l~fSL~Yd~~~G~L~VtVieArdL~~~D~~G~sDPYVkV~Lgp---~k~KTkVikkTlNPvWnEtF~F~V~~~e-~~ 127 (558)
.+++.+++.|....+.|.|+|++|++|+.++..+.+||||++++.+ .+++|+++++|+||+|||+|.|.+...+ ..
T Consensus 20 ~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~ 99 (143)
T 3f04_A 20 LGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGG 99 (143)
T ss_dssp CCEEEEEEEEETTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTT
T ss_pred eEEEEEEEEEeCCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCC
Confidence 5788999999999999999999999999999889999999999943 5889999999999999999999987422 34
Q ss_pred ceEEEEEeecCCCC-CCccEEEEEecccccCCCceeeeeecCC
Q 008661 128 NVLVIEVRDKDHFV-DDTLGDCTINISDLRDGQRHDMWIPLQN 169 (558)
Q Consensus 128 ~tL~V~V~D~D~~s-DDfIGev~IpL~eL~~~~~~e~W~~L~~ 169 (558)
..|.|+|||+|.++ +++||++.|+|..+..+...+.|++|++
T Consensus 100 ~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 100 KTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp CEEEEEEEECCSSSCCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred CEEEEEEEeCCCCCCCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 69999999999997 9999999999999998888999999975
No 13
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.85 E-value=5.2e-21 Score=172.85 Aligned_cols=116 Identities=21% Similarity=0.341 Sum_probs=103.8
Q ss_pred CCCceeEeeecCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC----eEEEeeeecCCCCCccceEEEEeeccCCC-
Q 008661 52 QPGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGP----YRFRTKTQRKTLSPKWHEEFNIPISTWDS- 126 (558)
Q Consensus 52 ~~~l~fSL~Yd~~~G~L~VtVieArdL~~~D~~G~sDPYVkV~Lgp----~k~KTkVikkTlNPvWnEtF~F~V~~~e~- 126 (558)
.|+++|+|.|+...+.|+|+|++|+ ++|.+|.+||||++++.+ .+++|+++++|+||+|||+|.|.+...+.
T Consensus 12 ~G~l~~sl~y~~~~~~L~V~v~~a~---~~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~ 88 (138)
T 1wfm_A 12 APKLHYCLDYDCQKAELFVTRLEAV---TSNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELP 88 (138)
T ss_dssp CCEEEEEEEEETTTTEEEEEEEEEE---CCCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSST
T ss_pred ceEEEEEEEEeCCCCEEEEEEEEEE---cCCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcC
Confidence 5789999999999999999999999 467889999999999953 36899999999999999999999875332
Q ss_pred CceEEEEEeecCCCC-CCccEEEEEecccccCCCceeeeeecCCC
Q 008661 127 PNVLVIEVRDKDHFV-DDTLGDCTINISDLRDGQRHDMWIPLQNI 170 (558)
Q Consensus 127 ~~tL~V~V~D~D~~s-DDfIGev~IpL~eL~~~~~~e~W~~L~~k 170 (558)
...|.|+|||+|.++ +++||++.|+|.++..+.....|++|.+.
T Consensus 89 ~~~L~~~V~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~ 133 (138)
T 1wfm_A 89 TATLTLTLRTCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKTS 133 (138)
T ss_dssp TCEEEEEEEECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECCCC
T ss_pred CCEEEEEEEECCCCCCCcEEEEEEEEcccccCcccccceeeCcCC
Confidence 468999999999998 99999999999999877788999999864
No 14
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.85 E-value=2.9e-21 Score=180.79 Aligned_cols=116 Identities=26% Similarity=0.455 Sum_probs=102.8
Q ss_pred cCCceEEEEEEEEecCCCCCCC----------CCCCCcEEEEEeCCeE-EEeeeecCCCCCccceEEEEeeccCCCCceE
Q 008661 62 KEPVAYARVEVVEASDMKPSDL----------NGLADPYVKGQLGPYR-FRTKTQRKTLSPKWHEEFNIPISTWDSPNVL 130 (558)
Q Consensus 62 d~~~G~L~VtVieArdL~~~D~----------~G~sDPYVkV~Lgp~k-~KTkVikkTlNPvWnEtF~F~V~~~e~~~tL 130 (558)
....|.|+|+|++|++|+++|. .|.+||||+|+++..+ .+|+++++|+||+|||+|.|.+.. ...|
T Consensus 25 ~~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~---~~~L 101 (157)
T 2fk9_A 25 MKFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTD---GGHL 101 (157)
T ss_dssp CCEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEE---ECEE
T ss_pred ccCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCC---CCEE
Confidence 3457999999999999999883 3679999999998855 699999999999999999999875 4589
Q ss_pred EEEEeecCCCC-CCccEEEEEecccccCC----CceeeeeecCCCCceEEEEEEEEE
Q 008661 131 VIEVRDKDHFV-DDTLGDCTINISDLRDG----QRHDMWIPLQNIKIGRLHLAITVL 182 (558)
Q Consensus 131 ~V~V~D~D~~s-DDfIGev~IpL~eL~~~----~~~e~W~~L~~k~~GeL~LsL~y~ 182 (558)
.|+|||+|.++ |++||.+.|+|.++..+ ...+.||+|++ .|+|+|+++|.
T Consensus 102 ~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~--~G~i~l~l~~~ 156 (157)
T 2fk9_A 102 ELAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP--EGKVFVVITLT 156 (157)
T ss_dssp EEEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS--SCEEEEEEEEC
T ss_pred EEEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC--CcEEEEEEEEE
Confidence 99999999998 99999999999998754 66899999985 89999999873
No 15
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.85 E-value=4.1e-21 Score=176.13 Aligned_cols=123 Identities=20% Similarity=0.341 Sum_probs=106.9
Q ss_pred CCCCCceeEeeecCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC-----eEEEeeeecCCCCCccceEEEEeeccC
Q 008661 50 SPQPGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGP-----YRFRTKTQRKTLSPKWHEEFNIPISTW 124 (558)
Q Consensus 50 s~~~~l~fSL~Yd~~~G~L~VtVieArdL~~~D~~G~sDPYVkV~Lgp-----~k~KTkVikkTlNPvWnEtF~F~V~~~ 124 (558)
.+.|++.|+|.|....+.|.|+|++|++|++++ .|.+||||++++.+ .+++|+++++|+||+|||+|.|.+...
T Consensus 11 ~~~G~~~lsL~y~~~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 89 (153)
T 3fbk_A 11 KVQGAGQLRLSIDAQDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEE 89 (153)
T ss_dssp --CCCCEEEEEEEESSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGG
T ss_pred CCCCEEEEEEEEECCCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccH
Confidence 357889999999999999999999999999999 69999999999943 578999999999999999999999643
Q ss_pred CCCceEEEEEeecCCCC--CCccEEEEEecccccC-CCceeeeeecCCCCce
Q 008661 125 DSPNVLVIEVRDKDHFV--DDTLGDCTINISDLRD-GQRHDMWIPLQNIKIG 173 (558)
Q Consensus 125 e~~~tL~V~V~D~D~~s--DDfIGev~IpL~eL~~-~~~~e~W~~L~~k~~G 173 (558)
+....|.|+|||++.++ +++||++.|+|.++.. +.....||+|.+...|
T Consensus 90 ~~~~~L~i~V~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~~~g 141 (153)
T 3fbk_A 90 DDQKRLLVTVWNRASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGEHLG 141 (153)
T ss_dssp GTTSEEEEEEEECCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCTTGG
T ss_pred HhCCEEEEEEEeCCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCChhhc
Confidence 34567999999999974 8999999999999984 6778999999876544
No 16
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.85 E-value=4.4e-21 Score=169.60 Aligned_cols=116 Identities=23% Similarity=0.284 Sum_probs=99.7
Q ss_pred CCCceeEeeecCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEeC-----CeEEEeeeecCCCCCccceEEEEeeccCC-
Q 008661 52 QPGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLG-----PYRFRTKTQRKTLSPKWHEEFNIPISTWD- 125 (558)
Q Consensus 52 ~~~l~fSL~Yd~~~G~L~VtVieArdL~~~D~~G~sDPYVkV~Lg-----p~k~KTkVikkTlNPvWnEtF~F~V~~~e- 125 (558)
.|++.+++.|....+.|.|+|++|++|+.++..|.+||||++++. ..+++|+++++|+||+|||+|.|.+...+
T Consensus 4 ~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~ 83 (129)
T 2bwq_A 4 SGQLSIKLWFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRRE 83 (129)
T ss_dssp CCEEEEEEEEETTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGG
T ss_pred eEEEEEEEEEccCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHH
Confidence 467899999999999999999999999999999999999999993 37899999999999999999999953211
Q ss_pred -CCceEEEEEeecCCCC---CCccEEEEEecccccCCCceeeeeecC
Q 008661 126 -SPNVLVIEVRDKDHFV---DDTLGDCTINISDLRDGQRHDMWIPLQ 168 (558)
Q Consensus 126 -~~~tL~V~V~D~D~~s---DDfIGev~IpL~eL~~~~~~e~W~~L~ 168 (558)
....|.|+|||++.++ +++||++.++|.++.... ...||+|+
T Consensus 84 ~~~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~Lq 129 (129)
T 2bwq_A 84 FRERMLEITLWDQARVREEESEFLGEILIELETALLDD-EPHWYKLQ 129 (129)
T ss_dssp GGGCEEEEEEEEC-------CEEEEEEEEEGGGCCCSS-CEEEEECC
T ss_pred hcCCeEEEEEEECCcCcCcCCceeEEEEEEccccCCCc-CCccEECc
Confidence 3469999999999986 889999999999987754 88999985
No 17
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.84 E-value=1.7e-21 Score=177.31 Aligned_cols=120 Identities=23% Similarity=0.315 Sum_probs=108.0
Q ss_pred CCCCceeEeeecCCceEEEEEEEEecCCCCCC-CCCCCCcEEEEEeCC-----eEEEeeeecCCCCCccceEEEEeeccC
Q 008661 51 PQPGNWFSVDVKEPVAYARVEVVEASDMKPSD-LNGLADPYVKGQLGP-----YRFRTKTQRKTLSPKWHEEFNIPISTW 124 (558)
Q Consensus 51 ~~~~l~fSL~Yd~~~G~L~VtVieArdL~~~D-~~G~sDPYVkV~Lgp-----~k~KTkVikkTlNPvWnEtF~F~V~~~ 124 (558)
..|++.+++.|....+.|.|+|++|++|+.++ ..+.+||||++++.+ .+++|+++++|+||+|||+|.|.+...
T Consensus 8 ~~G~l~~sl~y~~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 87 (148)
T 3fdw_A 8 VTGRIAFSLKYEQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPES 87 (148)
T ss_dssp CCCEEEEEEEEETTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCST
T ss_pred cceEEEEEEEEeCCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChh
Confidence 35789999999999999999999999999988 589999999999974 478999999999999999999998753
Q ss_pred C-CCceEEEEEeecCCCC-CCccEEEEEecccccCCCceeeeeecCCC
Q 008661 125 D-SPNVLVIEVRDKDHFV-DDTLGDCTINISDLRDGQRHDMWIPLQNI 170 (558)
Q Consensus 125 e-~~~tL~V~V~D~D~~s-DDfIGev~IpL~eL~~~~~~e~W~~L~~k 170 (558)
+ ....|.|+|||+|.++ +++||++.|+|.++..+.....||+|+++
T Consensus 88 ~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 135 (148)
T 3fdw_A 88 LLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGK 135 (148)
T ss_dssp TGGGCEEEEEEEEECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC
T ss_pred HhCceEEEEEEEECCCCcCCcEEEEEEEEcccccccCCccceEECcCc
Confidence 3 2457999999999997 89999999999999887788999999874
No 18
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.84 E-value=6.6e-21 Score=171.57 Aligned_cols=117 Identities=21% Similarity=0.234 Sum_probs=101.6
Q ss_pred ceeEeeecCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEeC-----CeEEEeeeecCCCCCccceEEEEe-eccCC-CC
Q 008661 55 NWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLG-----PYRFRTKTQRKTLSPKWHEEFNIP-ISTWD-SP 127 (558)
Q Consensus 55 l~fSL~Yd~~~G~L~VtVieArdL~~~D~~G~sDPYVkV~Lg-----p~k~KTkVikkTlNPvWnEtF~F~-V~~~e-~~ 127 (558)
..|.+.|+...+.|.|+|++|++|+. +.++.+||||++++. ..+++|+++++|+||+|||+|.|. +...+ ..
T Consensus 9 ~~~~~~~~~~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~ 87 (134)
T 2b3r_A 9 GAVKLSVSYRNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQ 87 (134)
T ss_dssp CEEEEEEEEETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTT
T ss_pred EEEEEEEeecCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCc
Confidence 34788888899999999999999997 778999999999993 367899999999999999999999 76322 35
Q ss_pred ceEEEEEeecCCCC-CCccEEEEEecccccCCCceeeeeecCCCCc
Q 008661 128 NVLVIEVRDKDHFV-DDTLGDCTINISDLRDGQRHDMWIPLQNIKI 172 (558)
Q Consensus 128 ~tL~V~V~D~D~~s-DDfIGev~IpL~eL~~~~~~e~W~~L~~k~~ 172 (558)
..|.|+|||+|.++ +++||++.|+|.++..+.....||+|.+...
T Consensus 88 ~~L~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~~ 133 (134)
T 2b3r_A 88 RELQLSVLSAESLRENFFLGGITLPLKDFNLSKETVKWYQLTAATY 133 (134)
T ss_dssp CEEEEEEEECCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECBC---
T ss_pred CEEEEEEEECCCCCCCcEEEEEEEEhhhccCCCCcceeEECCCccC
Confidence 69999999999998 8999999999999998888999999987543
No 19
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.84 E-value=5e-21 Score=171.48 Aligned_cols=121 Identities=23% Similarity=0.279 Sum_probs=106.4
Q ss_pred CCCceeEeeecCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEeC-----CeEEEeeeecCCCCCccceEEEEeeccCC-
Q 008661 52 QPGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLG-----PYRFRTKTQRKTLSPKWHEEFNIPISTWD- 125 (558)
Q Consensus 52 ~~~l~fSL~Yd~~~G~L~VtVieArdL~~~D~~G~sDPYVkV~Lg-----p~k~KTkVikkTlNPvWnEtF~F~V~~~e- 125 (558)
.|++.+++.|....+.|.|+|++|++|+.++..+.+||||++++. ..+++|+++++|+||+|||+|.|.+...+
T Consensus 7 ~G~i~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~ 86 (141)
T 1v27_A 7 GGQLSIKLWFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRRE 86 (141)
T ss_dssp CCEEEEEEEEETTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTG
T ss_pred ccEEEEEEEEeCCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHH
Confidence 578899999999999999999999999999999999999999994 36789999999999999999999953222
Q ss_pred -CCceEEEEEeecCCCC---CCccEEEEEecccccCCCceeeeeecCCCCce
Q 008661 126 -SPNVLVIEVRDKDHFV---DDTLGDCTINISDLRDGQRHDMWIPLQNIKIG 173 (558)
Q Consensus 126 -~~~tL~V~V~D~D~~s---DDfIGev~IpL~eL~~~~~~e~W~~L~~k~~G 173 (558)
....|.|+|||++.++ +++||++.|+|.++.... ...||+|.+...|
T Consensus 87 ~~~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~~~~g 137 (141)
T 1v27_A 87 FRERMLEITLWDQARVREEESEFLGEILIELETALLDD-EPHWYKLQTHDSG 137 (141)
T ss_dssp GGTCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGCCCSS-EEEEEECBCCSSC
T ss_pred hcCCEEEEEEEECCCCcCCCCceEEEEEEEccccCCCC-CCceEECcccccC
Confidence 3469999999999986 789999999999987654 8899999876554
No 20
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.84 E-value=1.3e-20 Score=176.69 Aligned_cols=121 Identities=28% Similarity=0.439 Sum_probs=99.6
Q ss_pred cCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC------eEEEeeeecCCCCCccceEEEEeeccCCCCceEEEEEe
Q 008661 62 KEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGP------YRFRTKTQRKTLSPKWHEEFNIPISTWDSPNVLVIEVR 135 (558)
Q Consensus 62 d~~~G~L~VtVieArdL~~~D~~G~sDPYVkV~Lgp------~k~KTkVikkTlNPvWnEtF~F~V~~~e~~~tL~V~V~ 135 (558)
....|.|+|+|++|++|+.++..|.+||||++++++ .+++|+++++++||+|||+|.|.+.. ....|.|+||
T Consensus 4 ~~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~--~~~~L~~~V~ 81 (176)
T 3m7f_B 4 NDDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLP--QRHRILFEVF 81 (176)
T ss_dssp CTTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECT--TTCEEEEEEE
T ss_pred CCCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcC--CCCEEEEEEE
Confidence 456799999999999999999999999999999975 57899999999999999999999985 3568999999
Q ss_pred ecCCCC-CCccEEEEEecccccCCCce-e-----eeeecCCC-----CceEEEEEEEEEec
Q 008661 136 DKDHFV-DDTLGDCTINISDLRDGQRH-D-----MWIPLQNI-----KIGRLHLAITVLEE 184 (558)
Q Consensus 136 D~D~~s-DDfIGev~IpL~eL~~~~~~-e-----~W~~L~~k-----~~GeL~LsL~y~p~ 184 (558)
|++.++ +++||++.|+|..+...... + .||+|... ..|+|+|+|+|.|.
T Consensus 82 d~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 82 DENRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp ECC----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEECC-
T ss_pred ECCCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEEeC
Confidence 999997 99999999999999876443 2 79999752 46999999999986
No 21
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.84 E-value=6.1e-21 Score=171.51 Aligned_cols=116 Identities=27% Similarity=0.467 Sum_probs=102.1
Q ss_pred ceEEEEEEEEecCCCCCCCCCC-----------CCcEEEEEeCCeE-EEeeeecCCCCCccceEEEEeeccCCCCceEEE
Q 008661 65 VAYARVEVVEASDMKPSDLNGL-----------ADPYVKGQLGPYR-FRTKTQRKTLSPKWHEEFNIPISTWDSPNVLVI 132 (558)
Q Consensus 65 ~G~L~VtVieArdL~~~D~~G~-----------sDPYVkV~Lgp~k-~KTkVikkTlNPvWnEtF~F~V~~~e~~~tL~V 132 (558)
.|.|+|+|++|++|+++|..+. +||||+++++... .+|+++++|+||+|||+|.|.+.. ...|.|
T Consensus 5 ~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~---~~~L~~ 81 (136)
T 1gmi_A 5 NGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCN---GRKIEL 81 (136)
T ss_dssp EEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEE---ECEEEE
T ss_pred ceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecC---CCEEEE
Confidence 5899999999999999885443 9999999998754 699999999999999999999975 279999
Q ss_pred EEeecCCCC-CCccEEEEEecccccCCC--ceeeeeecCCCCceEEEEEEEEEecc
Q 008661 133 EVRDKDHFV-DDTLGDCTINISDLRDGQ--RHDMWIPLQNIKIGRLHLAITVLEES 185 (558)
Q Consensus 133 ~V~D~D~~s-DDfIGev~IpL~eL~~~~--~~e~W~~L~~k~~GeL~LsL~y~p~~ 185 (558)
+|||+|.++ |++||++.|+|.++..+. ..+.|++|++ .|+|+|+++|....
T Consensus 82 ~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~~--~G~i~l~l~~~~~~ 135 (136)
T 1gmi_A 82 AVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLEP--EGKVYVIIDLSGSS 135 (136)
T ss_dssp EEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECBS--SCEEEEEEEEEEEE
T ss_pred EEEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEcCC--CeEEEEEEEEEecC
Confidence 999999988 999999999999997653 3589999985 89999999998754
No 22
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.84 E-value=3.8e-21 Score=171.45 Aligned_cols=120 Identities=32% Similarity=0.509 Sum_probs=105.5
Q ss_pred CCCceeEeeecCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEe-----CCeEEEeeeecCCCCCccceEEEEeeccCCC
Q 008661 52 QPGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQL-----GPYRFRTKTQRKTLSPKWHEEFNIPISTWDS 126 (558)
Q Consensus 52 ~~~l~fSL~Yd~~~G~L~VtVieArdL~~~D~~G~sDPYVkV~L-----gp~k~KTkVikkTlNPvWnEtF~F~V~~~e~ 126 (558)
.|.+.+++.| ..+.|.|+|++|++|+.++..+.+||||++++ ...+++|+++++++||+|||+|.|.+...+.
T Consensus 4 ~G~l~~~l~~--~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~ 81 (137)
T 3rdl_A 4 RGRIYLKAEV--TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDK 81 (137)
T ss_dssp CCEEEEEEEE--ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGG
T ss_pred ceEEEEEEEE--cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhc
Confidence 4678899999 57999999999999999999999999999999 3468899999999999999999999875334
Q ss_pred CceEEEEEeecCCCC-CCccEEEEEecccccCCCceeeeeecCCCCceE
Q 008661 127 PNVLVIEVRDKDHFV-DDTLGDCTINISDLRDGQRHDMWIPLQNIKIGR 174 (558)
Q Consensus 127 ~~tL~V~V~D~D~~s-DDfIGev~IpL~eL~~~~~~e~W~~L~~k~~Ge 174 (558)
...|.|+|||++.++ +++||++.|+|.++..+. ...||+|.+...|+
T Consensus 82 ~~~l~i~v~d~d~~~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~~~g~ 129 (137)
T 3rdl_A 82 DRRLSVEIWDWDRTTRNDFMGSLSFGVSELMKMP-ASGWYKLLNQEEGE 129 (137)
T ss_dssp GCEEEEEEEECCSSSCCEEEEEEEEEHHHHHHSC-EEEEEECBCHHHHT
T ss_pred CCEEEEEEEECCCCCCCceEEEEEEeHHHhccCc-cCceEECcCccccc
Confidence 568999999999997 999999999999997665 88999998755443
No 23
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.84 E-value=5.9e-21 Score=172.01 Aligned_cols=119 Identities=34% Similarity=0.510 Sum_probs=107.1
Q ss_pred CCCCceeEeeecCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC-----eEEEeeeecCCCCCccceEEEEe-eccC
Q 008661 51 PQPGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGP-----YRFRTKTQRKTLSPKWHEEFNIP-ISTW 124 (558)
Q Consensus 51 ~~~~l~fSL~Yd~~~G~L~VtVieArdL~~~D~~G~sDPYVkV~Lgp-----~k~KTkVikkTlNPvWnEtF~F~-V~~~ 124 (558)
..|.+.+++.|....+.|.|+|++|++|+.++..|.+||||++++.+ .+++|+++++|+||+|||+|.|. +...
T Consensus 14 ~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~ 93 (142)
T 2chd_A 14 TLGALEFSLLYDQDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEE 93 (142)
T ss_dssp CCCEEEEEEEEEGGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHH
T ss_pred ccceEEEEEEEeCCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHH
Confidence 35788999999999999999999999999999999999999999976 68899999999999999999998 5431
Q ss_pred CC-CceEEEEEeecCCCC-CCccEEEEEecccccCCCceeeeeecCC
Q 008661 125 DS-PNVLVIEVRDKDHFV-DDTLGDCTINISDLRDGQRHDMWIPLQN 169 (558)
Q Consensus 125 e~-~~tL~V~V~D~D~~s-DDfIGev~IpL~eL~~~~~~e~W~~L~~ 169 (558)
+. ...|.|+|||++.++ +++||++.|+|.++..++....|++|+.
T Consensus 94 ~~~~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 94 DMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp HHHHCEEEEEEEEECTTSCEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred HccCCEEEEEEEECCCCCCCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence 11 368999999999997 8999999999999998888999999975
No 24
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.83 E-value=9.1e-21 Score=170.80 Aligned_cols=119 Identities=21% Similarity=0.330 Sum_probs=105.1
Q ss_pred CCCCceeEeeecCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC-----eEEEeeeecCCCCCccceEEEEeeccCC
Q 008661 51 PQPGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGP-----YRFRTKTQRKTLSPKWHEEFNIPISTWD 125 (558)
Q Consensus 51 ~~~~l~fSL~Yd~~~G~L~VtVieArdL~~~D~~G~sDPYVkV~Lgp-----~k~KTkVikkTlNPvWnEtF~F~V~~~e 125 (558)
..|++++++.|....+.|.|+|++|++|++++..+ +||||++++.+ .+++|+++++|+||+|||+|.|.+...+
T Consensus 9 ~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~ 87 (142)
T 2dmg_A 9 PLGQIQLTIRHSSQRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPE 87 (142)
T ss_dssp SSCEEEEEEEEETTTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHH
T ss_pred CcceEEEEEEEeCCCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHH
Confidence 35788999999999999999999999999999888 99999999954 5789999999999999999999986422
Q ss_pred -CCceEEEEEeecCCCC---CCccEEEEEecccccCCCceeeeeecCCC
Q 008661 126 -SPNVLVIEVRDKDHFV---DDTLGDCTINISDLRDGQRHDMWIPLQNI 170 (558)
Q Consensus 126 -~~~tL~V~V~D~D~~s---DDfIGev~IpL~eL~~~~~~e~W~~L~~k 170 (558)
....|.|+|||++.++ +++||++.|+|..+..+.....|++|.+.
T Consensus 88 l~~~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~ 136 (142)
T 2dmg_A 88 VQRRTLDVAVKNSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTED 136 (142)
T ss_dssp HHHCEEEEEEEECCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCS
T ss_pred hCcCEEEEEEEECCCccccCCcEEEEEEEecccccccccccceeeccCC
Confidence 2358999999999875 36999999999999887788999999864
No 25
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.83 E-value=2.9e-20 Score=167.00 Aligned_cols=120 Identities=24% Similarity=0.291 Sum_probs=104.9
Q ss_pred CCCCceeEeeecCCceEEEEEEEEecCCCCCCCC-CCCCcEEEEEeCC---eEEEeeeecCCCCCccceEEEEe-eccCC
Q 008661 51 PQPGNWFSVDVKEPVAYARVEVVEASDMKPSDLN-GLADPYVKGQLGP---YRFRTKTQRKTLSPKWHEEFNIP-ISTWD 125 (558)
Q Consensus 51 ~~~~l~fSL~Yd~~~G~L~VtVieArdL~~~D~~-G~sDPYVkV~Lgp---~k~KTkVikkTlNPvWnEtF~F~-V~~~e 125 (558)
..|.+.+++.|....+.|.|+|++|++|+.++.. +.+||||++++.+ .+++|+++++|+||+|||+|.|. +...+
T Consensus 7 ~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~ 86 (138)
T 1ugk_A 7 GLGTLFFSLEYNFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQ 86 (138)
T ss_dssp CCCEEEEEEEEEGGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTT
T ss_pred ccEEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHH
Confidence 3578999999999999999999999999999985 8999999999964 78999999999999999999995 65422
Q ss_pred -CCceEEEEEeecCCCC-CCccEEEEEecccccCCCc-eeeeeecCCC
Q 008661 126 -SPNVLVIEVRDKDHFV-DDTLGDCTINISDLRDGQR-HDMWIPLQNI 170 (558)
Q Consensus 126 -~~~tL~V~V~D~D~~s-DDfIGev~IpL~eL~~~~~-~e~W~~L~~k 170 (558)
....|.|+|||+|.++ +++||++.|+|.++..+.. ...|++|++.
T Consensus 87 ~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~~ 134 (138)
T 1ugk_A 87 IQELALHFTILSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNREIISG 134 (138)
T ss_dssp GGGCEEEEEEEEECSSCCCCCCEEEEEECTTCCCTTCCEEEEEECBSS
T ss_pred hccCEEEEEEEECCCCCCCcEEEEEEEehhHccCCCCcchhhhhhhcC
Confidence 2458999999999997 8999999999999987644 4678999864
No 26
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.83 E-value=5e-21 Score=174.38 Aligned_cols=121 Identities=31% Similarity=0.495 Sum_probs=105.6
Q ss_pred CCCceeEeeecCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC-----eEEEeeeecCCCCCccceEEEEeeccCCC
Q 008661 52 QPGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGP-----YRFRTKTQRKTLSPKWHEEFNIPISTWDS 126 (558)
Q Consensus 52 ~~~l~fSL~Yd~~~G~L~VtVieArdL~~~D~~G~sDPYVkV~Lgp-----~k~KTkVikkTlNPvWnEtF~F~V~~~e~ 126 (558)
.+.+.+++.|. .+.|+|+|++|++|+.++..+.+||||++++.+ .+++|+++++|+||+|||+|.|.+...+.
T Consensus 19 ~G~l~~~l~~~--~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~ 96 (149)
T 1a25_A 19 RGRIYIQAHID--REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDK 96 (149)
T ss_dssp TCEEEEEEEES--SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGG
T ss_pred ceEEEEEEEec--CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccC
Confidence 46788888884 578999999999999999999999999999963 67899999999999999999999975334
Q ss_pred CceEEEEEeecCCCC-CCccEEEEEecccccCCCceeeeeecCCCCceEE
Q 008661 127 PNVLVIEVRDKDHFV-DDTLGDCTINISDLRDGQRHDMWIPLQNIKIGRL 175 (558)
Q Consensus 127 ~~tL~V~V~D~D~~s-DDfIGev~IpL~eL~~~~~~e~W~~L~~k~~GeL 175 (558)
...|.|+|||+|.++ +++||++.|+|.++..+ ..+.||+|.+...|++
T Consensus 97 ~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~~~~g~~ 145 (149)
T 1a25_A 97 DRRLSVEIWDWDLTSRNDFMGSLSFGISELQKA-GVDGWFKLLSQEEGEY 145 (149)
T ss_dssp GCEEEEEEEECCSSSCCEEEEEEEEEHHHHTTC-CEEEEEECBCHHHHTT
T ss_pred CCEEEEEEEECCCCCCCCEEEEEEEEHHHhCcC-ccCCeEEccCCCCCcc
Confidence 568999999999997 99999999999999876 5789999987655543
No 27
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.83 E-value=2.8e-21 Score=173.84 Aligned_cols=118 Identities=28% Similarity=0.461 Sum_probs=104.0
Q ss_pred CCCceeEeeecCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEeCCe--------------EEEeeeecCCCCCccceEE
Q 008661 52 QPGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGPY--------------RFRTKTQRKTLSPKWHEEF 117 (558)
Q Consensus 52 ~~~l~fSL~Yd~~~G~L~VtVieArdL~~~D~~G~sDPYVkV~Lgp~--------------k~KTkVikkTlNPvWnEtF 117 (558)
.|++.+++.|. .+.|.|+|++|++|++++..|.+||||++++.+. +++|+++++|+||+|||+|
T Consensus 6 ~G~i~~~l~y~--~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f 83 (142)
T 1rh8_A 6 TGEIQLQINYD--LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTV 83 (142)
T ss_dssp CCEEEEEEEEE--TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEE
T ss_pred ceEEEEEEEEc--CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEE
Confidence 57788999998 7899999999999999999999999999999762 4789999999999999999
Q ss_pred EEe-eccCC-CCceEEEEEeecCCCC-CCccEEEEEecccccCCCceeeeeecCCCC
Q 008661 118 NIP-ISTWD-SPNVLVIEVRDKDHFV-DDTLGDCTINISDLRDGQRHDMWIPLQNIK 171 (558)
Q Consensus 118 ~F~-V~~~e-~~~tL~V~V~D~D~~s-DDfIGev~IpL~eL~~~~~~e~W~~L~~k~ 171 (558)
.|. +...+ ....|.|+|||+|.++ +++||++.|+|..+..+.....||+|.+..
T Consensus 84 ~f~~v~~~~l~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~ 140 (142)
T 1rh8_A 84 IYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQT 140 (142)
T ss_dssp EECSCCHHHHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBCCC
T ss_pred EECCcCHHHccCCEEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCccC
Confidence 997 54311 3569999999999997 899999999999998777789999998643
No 28
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.83 E-value=1.5e-20 Score=170.64 Aligned_cols=121 Identities=24% Similarity=0.325 Sum_probs=105.5
Q ss_pred CCCCCceeEeeecCCceEEEEEEEEecCCCCC-CCC------CCCCcEEEEEeCC---eEEEeeeecCCCCCccceEEEE
Q 008661 50 SPQPGNWFSVDVKEPVAYARVEVVEASDMKPS-DLN------GLADPYVKGQLGP---YRFRTKTQRKTLSPKWHEEFNI 119 (558)
Q Consensus 50 s~~~~l~fSL~Yd~~~G~L~VtVieArdL~~~-D~~------G~sDPYVkV~Lgp---~k~KTkVikkTlNPvWnEtF~F 119 (558)
...|+++|++.|.+..+.|.|+|++|++|+.+ +.+ +.+||||+|++.+ .+++|+++++|+||+|||+|.|
T Consensus 10 ~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f 89 (147)
T 2enp_A 10 YQLGMLHFSTQYDLLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTF 89 (147)
T ss_dssp CCCCEEEEEEEEETTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEE
T ss_pred CcceEEEEEEEEcCCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEE
Confidence 34678999999999999999999999999984 443 5899999999974 5789999999999999999999
Q ss_pred eeccCC-CCceEEEEEeecCCCC-CCccEEEEEecccccCCCceeeeeecCCC
Q 008661 120 PISTWD-SPNVLVIEVRDKDHFV-DDTLGDCTINISDLRDGQRHDMWIPLQNI 170 (558)
Q Consensus 120 ~V~~~e-~~~tL~V~V~D~D~~s-DDfIGev~IpL~eL~~~~~~e~W~~L~~k 170 (558)
.+...+ ....|.|+|||+|.++ +++||++.|+|.++........|+.|+++
T Consensus 90 ~v~~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~ 142 (147)
T 2enp_A 90 EIPFLEAQRRTLLLTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALIPS 142 (147)
T ss_dssp CCCHHHHHHSEEEEEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCBCC
T ss_pred EeChHHhccCEEEEEEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEeecC
Confidence 987422 2358999999999997 89999999999999887777899999864
No 29
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.82 E-value=3.2e-20 Score=173.80 Aligned_cols=115 Identities=22% Similarity=0.207 Sum_probs=103.2
Q ss_pred CCCceeEeeecCCceEEEEEEEEecCCCCCCC-CCCCCcEEEEEeCC-----eEEEeeeecCCCCCccceEEEEeeccCC
Q 008661 52 QPGNWFSVDVKEPVAYARVEVVEASDMKPSDL-NGLADPYVKGQLGP-----YRFRTKTQRKTLSPKWHEEFNIPISTWD 125 (558)
Q Consensus 52 ~~~l~fSL~Yd~~~G~L~VtVieArdL~~~D~-~G~sDPYVkV~Lgp-----~k~KTkVikkTlNPvWnEtF~F~V~~~e 125 (558)
.|.+.+++.| ..+.|.|+|++|++|+++|. .|.+||||+|++.+ .+++|+++++|+||+|||+|.|.+..
T Consensus 18 ~G~l~~~l~y--~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~-- 93 (171)
T 2q3x_A 18 MGDIQIGMED--KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESP-- 93 (171)
T ss_dssp CCEEEEEEEE--ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCC--
T ss_pred ccEEEEEEEE--CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecC--
Confidence 5788999999 68999999999999999995 79999999999965 37899999999999999999999864
Q ss_pred CCceEEEEEe-ecCCCC-CCccEEEEEecccccCCCceeeeeecCCC
Q 008661 126 SPNVLVIEVR-DKDHFV-DDTLGDCTINISDLRDGQRHDMWIPLQNI 170 (558)
Q Consensus 126 ~~~tL~V~V~-D~D~~s-DDfIGev~IpL~eL~~~~~~e~W~~L~~k 170 (558)
....|.|+|| |+|.++ +++||++.|+|.++..+.....||+|.+.
T Consensus 94 ~~~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 94 QGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp TTEEEEEEEEEECSTTCSSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred CCCEEEEEEEEcCCCCCCCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 3579999999 999998 89999999999999888889999999874
No 30
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.82 E-value=4.1e-20 Score=164.63 Aligned_cols=105 Identities=26% Similarity=0.387 Sum_probs=94.2
Q ss_pred CCCceeEeeecCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC-----eEEEeeeecCCCCCccceEEEEeeccCC-
Q 008661 52 QPGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGP-----YRFRTKTQRKTLSPKWHEEFNIPISTWD- 125 (558)
Q Consensus 52 ~~~l~fSL~Yd~~~G~L~VtVieArdL~~~D~~G~sDPYVkV~Lgp-----~k~KTkVikkTlNPvWnEtF~F~V~~~e- 125 (558)
.|++.+++.|....+.|.|+|++|++|+.++..|.+||||++++.+ .+++|+++++|+||+|||+|.|.+...+
T Consensus 2 ~G~l~~sl~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l 81 (138)
T 3n5a_A 2 RGELLLSLCYNPSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKL 81 (138)
T ss_dssp CCEEEEEEEEETTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGG
T ss_pred CcEEEEEEEEcCCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhc
Confidence 3678899999999999999999999999999999999999999964 4789999999999999999999987532
Q ss_pred CCceEEEEEeecCCCC-CCccEEEEEeccccc
Q 008661 126 SPNVLVIEVRDKDHFV-DDTLGDCTINISDLR 156 (558)
Q Consensus 126 ~~~tL~V~V~D~D~~s-DDfIGev~IpL~eL~ 156 (558)
....|.|+|||+|.++ +++||++.|+|..+.
T Consensus 82 ~~~~l~~~V~d~~~~~~~~~lG~~~i~l~~~~ 113 (138)
T 3n5a_A 82 RETTIIITVMDKDKLSRNDVIGKIYLSWKSGP 113 (138)
T ss_dssp GGEEEEEEEEECCSSSCCEEEEEEEESSSSCH
T ss_pred CceEEEEEEEECCCCCCCcEEEEEEEccccCC
Confidence 2358999999999997 999999999999753
No 31
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.82 E-value=6.8e-20 Score=168.56 Aligned_cols=121 Identities=25% Similarity=0.363 Sum_probs=104.8
Q ss_pred CCCCceeEeeecCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC-----eEEEeeeecCCCCCccceEEEEeeccCC
Q 008661 51 PQPGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGP-----YRFRTKTQRKTLSPKWHEEFNIPISTWD 125 (558)
Q Consensus 51 ~~~~l~fSL~Yd~~~G~L~VtVieArdL~~~D~~G~sDPYVkV~Lgp-----~k~KTkVikkTlNPvWnEtF~F~V~~~e 125 (558)
..|++.++|.|.+..+.|.|+|++|++|+.++..|.+||||++++.+ .+++|+++++|+||+|||+|.|.+...+
T Consensus 10 ~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~ 89 (159)
T 1tjx_A 10 KLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQ 89 (159)
T ss_dssp CCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGG
T ss_pred cCCeEEEEEEEcCCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHH
Confidence 35789999999999999999999999999999999999999999964 4789999999999999999999987432
Q ss_pred C-CceEEEEEeecCCCC-CCccEEEEEecccc------------cCCCceeeeeecCCCC
Q 008661 126 S-PNVLVIEVRDKDHFV-DDTLGDCTINISDL------------RDGQRHDMWIPLQNIK 171 (558)
Q Consensus 126 ~-~~tL~V~V~D~D~~s-DDfIGev~IpL~eL------------~~~~~~e~W~~L~~k~ 171 (558)
. ...|.|+|||+|.++ +++||++.|+|..+ ..+.....|++|.+..
T Consensus 90 l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~~~ 149 (159)
T 1tjx_A 90 IQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVEE 149 (159)
T ss_dssp GGGCEEEEEEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECBCHH
T ss_pred hCCcEEEEEEEECCCCCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECcCcc
Confidence 2 458999999999997 99999999999964 2345678899998643
No 32
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.82 E-value=1e-19 Score=162.24 Aligned_cols=114 Identities=19% Similarity=0.322 Sum_probs=98.8
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC--eEEEeeeecCCCCCccceEEEEeeccCCCCceEEEEEeecCCCC-
Q 008661 65 VAYARVEVVEASDMKPSDLNGLADPYVKGQLGP--YRFRTKTQRKTLSPKWHEEFNIPISTWDSPNVLVIEVRDKDHFV- 141 (558)
Q Consensus 65 ~G~L~VtVieArdL~~~D~~G~sDPYVkV~Lgp--~k~KTkVikkTlNPvWnEtF~F~V~~~e~~~tL~V~V~D~D~~s- 141 (558)
...|+|+|++|++|+++|..|.+||||++++.+ ..++|+++++|+||+|||+|.|.+... ..|.|+|||+|.++
T Consensus 4 ~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~---~~l~~~v~d~d~~~~ 80 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKT---DSITISVWNHKKIHK 80 (132)
T ss_dssp EEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETT---CCEEEEEEEGGGTTS
T ss_pred eEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCC---CEEEEEEEECCCCCC
Confidence 467999999999999999999999999999975 789999999999999999999999752 35999999999886
Q ss_pred ---CCccEEEEEecccc-cCCCceeeeeecCCC-------CceEEEEEEEE
Q 008661 142 ---DDTLGDCTINISDL-RDGQRHDMWIPLQNI-------KIGRLHLAITV 181 (558)
Q Consensus 142 ---DDfIGev~IpL~eL-~~~~~~e~W~~L~~k-------~~GeL~LsL~y 181 (558)
|++||++.|+|..+ ........|++|... ..|+|+|+|++
T Consensus 81 ~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 81 KQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp STTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred CCCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 68999999999988 333445678998753 37999999875
No 33
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.81 E-value=1.4e-19 Score=167.86 Aligned_cols=116 Identities=28% Similarity=0.403 Sum_probs=100.6
Q ss_pred CCCCceeEeeecCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC-----eEEEeeeecCCCCCccceEEEEeeccCC
Q 008661 51 PQPGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGP-----YRFRTKTQRKTLSPKWHEEFNIPISTWD 125 (558)
Q Consensus 51 ~~~~l~fSL~Yd~~~G~L~VtVieArdL~~~D~~G~sDPYVkV~Lgp-----~k~KTkVikkTlNPvWnEtF~F~V~~~e 125 (558)
..|++.+++.|....+.|.|+|++|++|+.++.+|.+||||++++.+ .+++|+++++|+||+|||+|.|.+...+
T Consensus 22 ~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~ 101 (166)
T 2cm5_A 22 ERGKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSD 101 (166)
T ss_dssp CCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGG
T ss_pred ccceEEEEEEEECCCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHh
Confidence 45789999999999999999999999999999999999999999976 6889999999999999999999987432
Q ss_pred -CCceEEEEEeecCCCC-CCccEEEEEecccccCCCceeeeeecC
Q 008661 126 -SPNVLVIEVRDKDHFV-DDTLGDCTINISDLRDGQRHDMWIPLQ 168 (558)
Q Consensus 126 -~~~tL~V~V~D~D~~s-DDfIGev~IpL~eL~~~~~~e~W~~L~ 168 (558)
....|.|+|||+|.++ +++||++.|+|..+. .....|++|.
T Consensus 102 l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~--~~~~~W~~l~ 144 (166)
T 2cm5_A 102 LAKKSLDISVWDYDIGKSNDYIGGCQLGISAKG--ERLKHWYECL 144 (166)
T ss_dssp GGGCEEEEEEEECCSSSCCEEEEEEEEETTCCH--HHHHHHHHHH
T ss_pred cCCCEEEEEEEECCCCCCCcEEEeEEEecccCC--chhHHHHHHH
Confidence 2469999999999997 899999999999863 2334455554
No 34
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.80 E-value=1e-19 Score=166.13 Aligned_cols=116 Identities=21% Similarity=0.277 Sum_probs=94.1
Q ss_pred CCCceeEeeecCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC-----eEEEeeeecCCCCCccceEEEEeeccCCC
Q 008661 52 QPGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGP-----YRFRTKTQRKTLSPKWHEEFNIPISTWDS 126 (558)
Q Consensus 52 ~~~l~fSL~Yd~~~G~L~VtVieArdL~~~D~~G~sDPYVkV~Lgp-----~k~KTkVikkTlNPvWnEtF~F~V~~~e~ 126 (558)
.|.+.+++.|.+..+.|.|+|++|++|+.++..|.+||||++++.+ .+++|+++++|+||+|||+|.|.+...+.
T Consensus 16 ~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l 95 (153)
T 1w15_A 16 RGELLVSLCYQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESL 95 (153)
T ss_dssp CCEEEEEEEEETTTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSS
T ss_pred ccEEEEEEEEcCCCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHh
Confidence 5788999999999999999999999999999999999999999943 26799999999999999999999875332
Q ss_pred -CceEEEEEeecCCCC-CCccEEEEEecccccCCCceeeeeecCC
Q 008661 127 -PNVLVIEVRDKDHFV-DDTLGDCTINISDLRDGQRHDMWIPLQN 169 (558)
Q Consensus 127 -~~tL~V~V~D~D~~s-DDfIGev~IpL~eL~~~~~~e~W~~L~~ 169 (558)
...|.|+|||+|.++ +++||++.|+|.. .+.....|++|..
T Consensus 96 ~~~~l~v~V~d~d~~~~~~~lG~~~i~l~~--~~~~~~~W~~l~~ 138 (153)
T 1w15_A 96 EEISVEFLVLDSERGSRNEVIGRLVLGATA--EGSGGGHWKEICD 138 (153)
T ss_dssp TTEEEEEEEEECCTTSCCEEEEEEEESTTC--CSHHHHHHHHHHH
T ss_pred CceEEEEEEEeCCCCCCCcEEEEEEECCCC--CchHHHHHHHHHh
Confidence 368999999999997 9999999999998 2334455666543
No 35
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.79 E-value=3e-19 Score=168.76 Aligned_cols=119 Identities=18% Similarity=0.230 Sum_probs=100.9
Q ss_pred CCceEEEEEEEEecCCCCCCCCCCCCcEEEEEeCCeEEEeeeecCCCCCccceEEEEeeccCCCCceEEEEEeecCCCC-
Q 008661 63 EPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGPYRFRTKTQRKTLSPKWHEEFNIPISTWDSPNVLVIEVRDKDHFV- 141 (558)
Q Consensus 63 ~~~G~L~VtVieArdL~~~D~~G~sDPYVkV~Lgp~k~KTkVikkTlNPvWnEtF~F~V~~~e~~~tL~V~V~D~D~~s- 141 (558)
...+.|+|+|++|++|+..+..+.+||||+|++++.+++|+++++|+||+|||+|.|.+.. ...|.|+|||+|.++
T Consensus 33 ~~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~~---~~~L~~~V~D~d~~~~ 109 (173)
T 2nq3_A 33 TMKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVTP---VSKLHFRVWSHQTLKS 109 (173)
T ss_dssp SCCEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEECT---TCEEEEEEEECCSSSC
T ss_pred CCceEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeCC---CCEEEEEEEECCCCCC
Confidence 3568899999999999944434459999999999999999999999999999999999853 679999999999997
Q ss_pred CCccEEEEEecccccCCC-----ceeeeeecCCC-----CceEEEEEEEEEec
Q 008661 142 DDTLGDCTINISDLRDGQ-----RHDMWIPLQNI-----KIGRLHLAITVLEE 184 (558)
Q Consensus 142 DDfIGev~IpL~eL~~~~-----~~e~W~~L~~k-----~~GeL~LsL~y~p~ 184 (558)
+++||++.|+|.++..+. ....|++|... ..|+|+|.|+|++.
T Consensus 110 dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~l~~ 162 (173)
T 2nq3_A 110 DVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDGLQL 162 (173)
T ss_dssp CEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEESEEC
T ss_pred CceEEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEeeeec
Confidence 899999999999986432 23679999753 46999999999865
No 36
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.72 E-value=2.1e-17 Score=177.55 Aligned_cols=119 Identities=27% Similarity=0.482 Sum_probs=106.6
Q ss_pred CCceEEEEEEEEecCCCCCCCCCCCCcEEEEEeCCeEEEeeeecCCCCCccceEEEEeeccCCCCceEEEEEeecCCCC-
Q 008661 63 EPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGPYRFRTKTQRKTLSPKWHEEFNIPISTWDSPNVLVIEVRDKDHFV- 141 (558)
Q Consensus 63 ~~~G~L~VtVieArdL~~~D~~G~sDPYVkV~Lgp~k~KTkVikkTlNPvWnEtF~F~V~~~e~~~tL~V~V~D~D~~s- 141 (558)
...+.|+|+|++|++|+++|..|.+||||++++++.+++|+++++|+||+|||+|.|.+.. .....|.|+|||+|.++
T Consensus 384 ~~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~-~~~~~l~~~v~d~d~~~~ 462 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKD-LYQDVLCLTLFDRDQFSP 462 (510)
T ss_dssp --CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESC-TTTCEEEEEEEECCSSSS
T ss_pred CCCceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecC-CCCCEEEEEEEeCCCCCC
Confidence 3568999999999999999999999999999999999999999999999999999999974 34568999999999998
Q ss_pred CCccEEEEEecccccCCCc----eeeeeecCCCCceEEEEEEEEE
Q 008661 142 DDTLGDCTINISDLRDGQR----HDMWIPLQNIKIGRLHLAITVL 182 (558)
Q Consensus 142 DDfIGev~IpL~eL~~~~~----~e~W~~L~~k~~GeL~LsL~y~ 182 (558)
|++||++.++|.++..+.. ...|++|.+...|+|+|.+.+.
T Consensus 463 ~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 463 DDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEVPTGEVWVRFDLQ 507 (510)
T ss_dssp CCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSSSSCEEEEEEEEE
T ss_pred CCceEEEEEEHHHhccccCCCCceeeeecCCCCCCceEEEEEEEE
Confidence 9999999999999876543 7789999988899999988764
No 37
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.70 E-value=9.3e-17 Score=159.88 Aligned_cols=119 Identities=25% Similarity=0.363 Sum_probs=102.7
Q ss_pred CCCceeEeeecCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC-----eEEEeeeecCCCCCccceEEEEeeccCCC
Q 008661 52 QPGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGP-----YRFRTKTQRKTLSPKWHEEFNIPISTWDS 126 (558)
Q Consensus 52 ~~~l~fSL~Yd~~~G~L~VtVieArdL~~~D~~G~sDPYVkV~Lgp-----~k~KTkVikkTlNPvWnEtF~F~V~~~e~ 126 (558)
.|.+.+++.|.+..+.|.|.|++|++|+.++..|.+||||++++.+ .+++|+++++|+||+|||+|.|.+...+.
T Consensus 136 ~G~i~l~l~~~p~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l 215 (284)
T 2r83_A 136 LGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQI 215 (284)
T ss_dssp CCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTG
T ss_pred cccEEEEEEecCcCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHh
Confidence 5678899999999999999999999999999999999999999953 46799999999999999999999875332
Q ss_pred -CceEEEEEeecCCCC-CCccEEEEEeccccc------------CCCceeeeeecCCC
Q 008661 127 -PNVLVIEVRDKDHFV-DDTLGDCTINISDLR------------DGQRHDMWIPLQNI 170 (558)
Q Consensus 127 -~~tL~V~V~D~D~~s-DDfIGev~IpL~eL~------------~~~~~e~W~~L~~k 170 (558)
...|.|+|||+|.++ +++||++.|+|..+. .+.....|++|.+.
T Consensus 216 ~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~~ 273 (284)
T 2r83_A 216 QKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVE 273 (284)
T ss_dssp GGEEEEEEEEECCSSSCCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBCH
T ss_pred CceEEEEEEEeCCCCCCCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCCc
Confidence 347999999999997 999999999998632 23456789999863
No 38
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.68 E-value=2.1e-16 Score=173.61 Aligned_cols=172 Identities=19% Similarity=0.186 Sum_probs=124.9
Q ss_pred eeeeccCCCCCccCCccHHHHHHHHHHHHHHhcccc-----C--ceeEeeccccCCC----CC--CceeEeeecCCceEE
Q 008661 2 TVKPIFTHGLDVTEFPGIAGWLDKLLSIAFEQTLVE-----P--NMLVVDVDKFASP----QP--GNWFSVDVKEPVAYA 68 (558)
Q Consensus 2 tlkPl~t~G~DVm~iPGLs~fl~~lI~~al~~~lV~-----P--n~l~Ipl~k~~s~----~~--~l~fSL~Yd~~~G~L 68 (558)
++.|+..+- ...+-....|+..|...+.+.-.+ | |-. .++...... .+ ...-...-....+.|
T Consensus 321 ~l~PI~~Lv---~~~~~kr~nLk~Ai~~Yl~e~~~c~~C~~PC~nn~-~~l~g~~C~C~C~~~~~t~~~~C~~~~~~~~L 396 (540)
T 3nsj_A 321 SLEPLHTLL---EEQNPKREALRQAISHYIMSRARWQNCSRPCRSGQ-HKSSHDSCQCECQDSKVTNQDCCPRQRGLAHL 396 (540)
T ss_dssp EEEEGGGGS---CTTCTHHHHHHHHHHHHHHHTCBCCCTTSCCBTTE-EECSSCTTCEEESCTTTBCGGGCBSSTTEEEE
T ss_pred EEEEHHHhc---CCcHHHHHHHHHHHHHHHHhcCchhhhcccccCCC-ccCCCCceEeeCCCCCCcccccccccCcccEE
Confidence 466772221 113566778888888888777555 4 222 123211110 11 000011122347899
Q ss_pred EEEEEEecCCCCCCCCCCCCcEEEEEeCCeEEEeeeecCCCCCccceEEEEeeccCCCCceEEEEEeecCCCC-CCccEE
Q 008661 69 RVEVVEASDMKPSDLNGLADPYVKGQLGPYRFRTKTQRKTLSPKWHEEFNIPISTWDSPNVLVIEVRDKDHFV-DDTLGD 147 (558)
Q Consensus 69 ~VtVieArdL~~~D~~G~sDPYVkV~Lgp~k~KTkVikkTlNPvWnEtF~F~V~~~e~~~tL~V~V~D~D~~s-DDfIGe 147 (558)
+|+|++|++|+. |..|.+||||+|+++..+++|+++++++||+|||+|.|.+......+.|.|+|||+|.++ ||+||.
T Consensus 397 ~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~~~~dD~LG~ 475 (540)
T 3nsj_A 397 VVSNFRAEHLWG-DYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDDDLLGS 475 (540)
T ss_dssp EEEEEEEESCCC-SSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCSSSCCEEEEE
T ss_pred EEEEEEccCCCc-ccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCCCCCCCEEEE
Confidence 999999999998 999999999999999989999999999999999999998754345678999999999997 899999
Q ss_pred EEEecccccCCCceeeeeecCCCCceEEEEEEEEEecc
Q 008661 148 CTINISDLRDGQRHDMWIPLQNIKIGRLHLAITVLEES 185 (558)
Q Consensus 148 v~IpL~eL~~~~~~e~W~~L~~k~~GeL~LsL~y~p~~ 185 (558)
+.++|.. +..+.|++|. .|.|+++++..-.+
T Consensus 476 ~~~~L~~----g~~~~~~~l~---~G~l~~~~~~~c~p 506 (540)
T 3nsj_A 476 CDRSPHS----GFHEVTCELN---HGRVKFSYHAKCLP 506 (540)
T ss_dssp EEECCCS----EEEEEEEECS---SSEEEEEEEEEECT
T ss_pred EEEEeeC----CcEEEEEEcC---CeEEEEEEEEEECC
Confidence 9999982 3478899986 59999988865443
No 39
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.64 E-value=1.1e-15 Score=137.78 Aligned_cols=87 Identities=21% Similarity=0.302 Sum_probs=72.8
Q ss_pred CceEEEEEEEEecCCCCCCCCCCCCcEEEEEeCCeEEEeeeec-CCCCCccceEEEEeeccCCCCceEEEEEeecCCCC-
Q 008661 64 PVAYARVEVVEASDMKPSDLNGLADPYVKGQLGPYRFRTKTQR-KTLSPKWHEEFNIPISTWDSPNVLVIEVRDKDHFV- 141 (558)
Q Consensus 64 ~~G~L~VtVieArdL~~~D~~G~sDPYVkV~Lgp~k~KTkVik-kTlNPvWnEtF~F~V~~~e~~~tL~V~V~D~D~~s- 141 (558)
.++.|+|+|++|++|+. .|.+||||+++ .+..+|++++ +|+||+|||+|.|.+.. ....|.|+|||+| ++
T Consensus 3 ~~~~L~V~V~~A~~l~~---~g~~DPYv~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~--~~~~L~~~V~D~d-~~~ 74 (131)
T 2cjt_A 3 VMSLLCVGVKKAKFDGA---QEKFNTYVTLK--VQNVKSTTIAVRGSQPSWEQDFMFEINR--LDLGLTVEVWNKG-LIW 74 (131)
T ss_dssp CCEEEEEEEEEEECSSC---GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEEECC--CSSEEEEEEEECC-SSC
T ss_pred cceEEEEEEEEeECCCC---CCCcCeEEEEE--ecCEEEeEecCCCCCceECCEEEEEEeC--CCCeEEEEEEECC-CCC
Confidence 35789999999998853 68899999999 3344565554 79999999999999985 3457999999999 66
Q ss_pred CCccEEEEEecccccCC
Q 008661 142 DDTLGDCTINISDLRDG 158 (558)
Q Consensus 142 DDfIGev~IpL~eL~~~ 158 (558)
|++||++.|+|.++...
T Consensus 75 dd~iG~~~i~l~~l~~~ 91 (131)
T 2cjt_A 75 DTMVGTVWIPLRTIRQS 91 (131)
T ss_dssp EEEEEEEEEEGGGSCBC
T ss_pred CCeEEEEEEEHHHhhhc
Confidence 99999999999998654
No 40
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.63 E-value=1e-16 Score=161.82 Aligned_cols=119 Identities=24% Similarity=0.373 Sum_probs=102.1
Q ss_pred CCCCceeEeeecCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC-----eEEEeeeecCCCCCccceEEEEeeccCC
Q 008661 51 PQPGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGP-----YRFRTKTQRKTLSPKWHEEFNIPISTWD 125 (558)
Q Consensus 51 ~~~~l~fSL~Yd~~~G~L~VtVieArdL~~~D~~G~sDPYVkV~Lgp-----~k~KTkVikkTlNPvWnEtF~F~V~~~e 125 (558)
..|.+.+++.|.+..+.|.|+|++|++|+++|..|.+||||++++.+ .+++|+++++|+||+|||+|.|.+....
T Consensus 137 ~~G~i~vsl~y~~~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~ 216 (296)
T 1dqv_A 137 DLGELNFSLCYLPTAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPES 216 (296)
T ss_dssp CCCEEEEEEEEETTTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGG
T ss_pred ccceEEEEEEeccccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHH
Confidence 35788899999999999999999999999999999999999999963 5789999999999999999999987532
Q ss_pred C-CceEEEEEeecCCCC-CCccEEEEEecccccC-------------CCceeeeeecCC
Q 008661 126 S-PNVLVIEVRDKDHFV-DDTLGDCTINISDLRD-------------GQRHDMWIPLQN 169 (558)
Q Consensus 126 ~-~~tL~V~V~D~D~~s-DDfIGev~IpL~eL~~-------------~~~~e~W~~L~~ 169 (558)
. ...|.|+|||+|.++ +++||.+.|+|..+.. +.....|+.|..
T Consensus 217 l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~~W~~~~~~~~~~~~~w~~L~~ 275 (296)
T 1dqv_A 217 VENVGLSIAVVDYDCIGHNEVIGVCRVGPEAADPHGREHWAEMLANPRKPVEHWHQLVE 275 (296)
T ss_dssp GGSCCCCCEEEECCSSSCCEEEEECCCSSCTTCHHHHHHHHTSSSSSSSCSCSCCCCBB
T ss_pred ccCcEEEEEEEeCCCCCCCceEEEEEECCccCCchhHHHHHHHHhCCCCceeEeeeccC
Confidence 2 347999999999997 9999999999997642 334567777765
No 41
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.61 E-value=2e-15 Score=139.42 Aligned_cols=115 Identities=16% Similarity=0.230 Sum_probs=101.5
Q ss_pred EEEEEEEEecCCCCCCCCCCCCcEEEEEeCCeEEEeeeec-CCCCCccceEEEEeeccC-CCCceEEEEEeecCCCC-CC
Q 008661 67 YARVEVVEASDMKPSDLNGLADPYVKGQLGPYRFRTKTQR-KTLSPKWHEEFNIPISTW-DSPNVLVIEVRDKDHFV-DD 143 (558)
Q Consensus 67 ~L~VtVieArdL~~~D~~G~sDPYVkV~Lgp~k~KTkVik-kTlNPvWnEtF~F~V~~~-e~~~tL~V~V~D~D~~s-DD 143 (558)
.|+|.|.+|.+|+ |.+|||+++.+...+++|++++ +++||+|||.|.|.+... +....|.|+|||+++++ +.
T Consensus 22 sL~V~l~~a~~Lp-----g~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v~~nr 96 (144)
T 3l9b_A 22 ALIVHLKTVSELR-----GRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKVFSNK 96 (144)
T ss_dssp EEEEEEEEEESCC-----SCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTTSCCE
T ss_pred EEEEEEEEecCCC-----CCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccccCCC
Confidence 5899999999997 5899999999999999999998 699999999999998842 35679999999999998 99
Q ss_pred ccEEEEEecccccCCCceeeeeecCCCC----ceEEEEEEEEEeccC
Q 008661 144 TLGDCTINISDLRDGQRHDMWIPLQNIK----IGRLHLAITVLEESA 186 (558)
Q Consensus 144 fIGev~IpL~eL~~~~~~e~W~~L~~k~----~GeL~LsL~y~p~~~ 186 (558)
+||++.++|.++...+....+.+|.+.. .++|+|.|+|.+..+
T Consensus 97 lIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~~~~a~I~l~l~Y~pp~g 143 (144)
T 3l9b_A 97 LIGTFRMVLQKVVEENRVEVSDTLIDDNNAIIKTSLSMEVRYQAADG 143 (144)
T ss_dssp EEEEEEEESHHHHHHSEEEEEEEEECTTSCEEEEEEEEEEEEEETTC
T ss_pred EEEEEEEEhHHhccCCeEEEeecccCCCCCccccEEEEEEEecCCCC
Confidence 9999999999998887777787776532 389999999999754
No 42
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.59 E-value=3.9e-15 Score=140.10 Aligned_cols=87 Identities=21% Similarity=0.286 Sum_probs=73.7
Q ss_pred CceEEEEEEEEecCCCCCCCCCCCCcEEEEEeCCeEEEeeeec-CCCCCccceEEEEeeccCCCCceEEEEEeecCCCC-
Q 008661 64 PVAYARVEVVEASDMKPSDLNGLADPYVKGQLGPYRFRTKTQR-KTLSPKWHEEFNIPISTWDSPNVLVIEVRDKDHFV- 141 (558)
Q Consensus 64 ~~G~L~VtVieArdL~~~D~~G~sDPYVkV~Lgp~k~KTkVik-kTlNPvWnEtF~F~V~~~e~~~tL~V~V~D~D~~s- 141 (558)
..+.|+|+|++|++|+ ..+.+||||+++ .+..+|++++ +++||+|||+|.|.+.. ....|.|+|||+| ++
T Consensus 12 ~~~~L~V~V~~A~~l~---~~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~--~~~~L~~~V~D~d-~~~ 83 (167)
T 2cjs_A 12 ILSLLCVGVKKAKFDG---AQEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINR--LDLGLTVEVWNKG-LIW 83 (167)
T ss_dssp CCCEEEEEEEEEECSS---CGGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCC--TTSEEEEEEEECC-SSC
T ss_pred ceEEEEEEEEEEECCC---CCCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeC--CCCEEEEEEEECC-CCC
Confidence 3679999999999884 368899999999 3345677665 79999999999999985 3558999999999 66
Q ss_pred CCccEEEEEecccccCC
Q 008661 142 DDTLGDCTINISDLRDG 158 (558)
Q Consensus 142 DDfIGev~IpL~eL~~~ 158 (558)
|++||++.|+|.++...
T Consensus 84 dd~iG~~~i~L~~l~~~ 100 (167)
T 2cjs_A 84 DTMVGTVWIPLRTIRQS 100 (167)
T ss_dssp CEEEEEEEEEGGGSCBC
T ss_pred CceEEEEEEEHHHhccc
Confidence 99999999999998654
No 43
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.56 E-value=4.6e-15 Score=168.27 Aligned_cols=112 Identities=25% Similarity=0.431 Sum_probs=99.7
Q ss_pred CCceEEEEEEEEecCCCC---CCCCCCCCcEEEEEeCC---eEEEeeeecCCCCCccceEEEEeeccCCCCceEEEEEee
Q 008661 63 EPVAYARVEVVEASDMKP---SDLNGLADPYVKGQLGP---YRFRTKTQRKTLSPKWHEEFNIPISTWDSPNVLVIEVRD 136 (558)
Q Consensus 63 ~~~G~L~VtVieArdL~~---~D~~G~sDPYVkV~Lgp---~k~KTkVikkTlNPvWnEtF~F~V~~~e~~~tL~V~V~D 136 (558)
.+.+.|+|+|++|++|+. +|..|.+||||+|++++ .+++|+++++|+||+|||+|.|.+... ....|.|+|||
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~-~~~~L~~~V~D 93 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPN-QENVLEITLMD 93 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTT-SCCBCEEEEEE
T ss_pred CCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCC-CCCEEEEEEEE
Confidence 467999999999999998 88889999999999984 688999999999999999999999853 45689999999
Q ss_pred cCCCCCCccEEEEEecccccCCCceeeeeecCCCCceEEEE
Q 008661 137 KDHFVDDTLGDCTINISDLRDGQRHDMWIPLQNIKIGRLHL 177 (558)
Q Consensus 137 ~D~~sDDfIGev~IpL~eL~~~~~~e~W~~L~~k~~GeL~L 177 (558)
+|.++|++||++.|+|.++..+.....|++|.+. +++.|
T Consensus 94 ~D~~~ddfIG~v~I~L~~L~~g~~~~~w~~L~~~--~e~~l 132 (749)
T 1cjy_A 94 ANYVMDETLGTATFTVSSMKVGEKKEVPFIFNQV--TEMVL 132 (749)
T ss_dssp CCSSSCEEEEEECCBSTTSCTTCCCCEEEEETTT--EEEEE
T ss_pred CCCCCCceeEEEEEEHHHcCCCCceEEEEecCCC--ceEee
Confidence 9998888999999999999888888999999864 44443
No 44
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.54 E-value=2.5e-14 Score=159.60 Aligned_cols=168 Identities=17% Similarity=0.174 Sum_probs=119.1
Q ss_pred cCCCCCc----cCCccHHHHHHHHHHHH--HHhccccCceeEeeccccCCCCCCceeEeeecCCceEEEEEEEEecCCCC
Q 008661 7 FTHGLDV----TEFPGIAGWLDKLLSIA--FEQTLVEPNMLVVDVDKFASPQPGNWFSVDVKEPVAYARVEVVEASDMKP 80 (558)
Q Consensus 7 ~t~G~DV----m~iPGLs~fl~~lI~~a--l~~~lV~Pn~l~Ipl~k~~s~~~~l~fSL~Yd~~~G~L~VtVieArdL~~ 80 (558)
+.+|.-| +..+|..-+|..-+-.. -..+..-|..+.-+.. .+.+... ..+ .....+.|+|+|++|++|+.
T Consensus 436 W~~G~QmvAlN~Qt~d~~m~ln~g~F~~ng~~GYvlKP~~lr~~~~-~f~p~~~--~~~-~~~~~~~L~V~Vi~A~~L~~ 511 (624)
T 1djx_A 436 WNGGCQIVALNFQTPGPEMDVYLGCFQDNGGCGYVLKPAFLRDPNT-TFNSRAL--TQG-PWWRPERLRVRIISGQQLPK 511 (624)
T ss_dssp HTTTCCEEEECTTCCSHHHHHHHHHHHSGGGCSEEECCGGGGCTTC-CCCTTSC--CSS-TTCCCEEEEEEEEEEESCCC
T ss_pred hhccceeeeecccCCchHHhHHHHHhhcCCCCccEECCHHHcCCCC-CcCcccc--ccc-CCccceEEEEEEEEcCCCCc
Confidence 6678777 34478877766555432 2232333443321110 0111000 000 12256899999999999999
Q ss_pred CCC--CCCCCcEEEEEeCC-----eEEEeeeecCC-CCCccceEEEEeeccCCCCceEEEEEeecCCCC-CCccEEEEEe
Q 008661 81 SDL--NGLADPYVKGQLGP-----YRFRTKTQRKT-LSPKWHEEFNIPISTWDSPNVLVIEVRDKDHFV-DDTLGDCTIN 151 (558)
Q Consensus 81 ~D~--~G~sDPYVkV~Lgp-----~k~KTkVikkT-lNPvWnEtF~F~V~~~e~~~tL~V~V~D~D~~s-DDfIGev~Ip 151 (558)
++. .+.+||||+|.+.+ .+++|++++++ +||+|||+|.|.+... ....|+|+|||+|.++ +++||++.|+
T Consensus 512 ~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~-el~~L~~~V~D~D~~~~dd~iG~~~ip 590 (624)
T 1djx_A 512 VNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVP-DLALVRFMVEDYDSSSKNDFIGQSTIP 590 (624)
T ss_dssp CSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCG-GGCEEEEEEEECCSSSCCEEEEEEEEE
T ss_pred ccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecC-CCCEEEEEEEEcCCCCCCceeEEEEEE
Confidence 884 68999999999943 68899999987 9999999999998753 2358999999999997 9999999999
Q ss_pred cccccCCCceeeeeecCCC-----CceEEEEEEEEE
Q 008661 152 ISDLRDGQRHDMWIPLQNI-----KIGRLHLAITVL 182 (558)
Q Consensus 152 L~eL~~~~~~e~W~~L~~k-----~~GeL~LsL~y~ 182 (558)
|..|..+. .|++|.+. ..|.|++.+.|.
T Consensus 591 l~~L~~G~---r~v~L~d~~g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 591 WNSLKQGY---RHVHLLSKNGDQHPSATLFVKISIQ 623 (624)
T ss_dssp GGGBCCEE---EEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred HHHcCCCc---EEEeCCCCCcCCCCceEEEEEEEEE
Confidence 99997753 58888653 247888888774
No 45
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.51 E-value=6.9e-15 Score=130.75 Aligned_cols=114 Identities=15% Similarity=0.154 Sum_probs=87.0
Q ss_pred ceEEEEEEEEEeccCC----------------CCCCCCcceEEecccCCCCceeeEEEeEecCCCCCCccCCCceeec-C
Q 008661 172 IGRLHLAITVLEESAK----------------QGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSV-S 234 (558)
Q Consensus 172 ~GeL~LsL~y~p~~~~----------------l~lsDPyVKv~L~~~~~~~krlkKKKT~VkK~TlNPvwN~E~F~Fe-p 234 (558)
+|+|.+++.|.+..+. .+.+||||++++... +.+..++||.++++|+||+|| |.|.|. +
T Consensus 2 ~G~l~~sl~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~---~~~~~~~kT~~~~~t~nP~wn-e~f~f~v~ 77 (138)
T 3n5a_A 2 RGELLLSLCYNPSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYK---DKRVEKKKTVTKKRNLNPIFN-ESFAFDIP 77 (138)
T ss_dssp CCEEEEEEEEETTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEET---TEEEEEEECCCCSSCSSCEEE-EEEEEECC
T ss_pred CcEEEEEEEEcCCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeC---CCccceEeCccccCCCCCcCc-ceEEEECC
Confidence 5778888777665443 234899999999543 456778999999999999999 999999 6
Q ss_pred CCCCCCCceEEEEEeccCc--ccc-ceE-EecC-CccccccCccccCCCCCcccceeecC
Q 008661 235 SEKSPKVADNFEPINIEGQ--QET-GIW-VHQP-GSEVAQTWEPRKGKNRRLDTLVRRVP 289 (558)
Q Consensus 235 ~e~l~~v~leveV~D~dG~--~e~-Gv~-v~~p-gt~~~~hW~~~l~~~r~~~~q~~~~~ 289 (558)
...+....+.++|||++.. ++. |-. +... .....+||.+|+.+|++++++||.+.
T Consensus 78 ~~~l~~~~l~~~V~d~~~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~~~~~~~~Wh~L~ 137 (138)
T 3n5a_A 78 TEKLRETTIIITVMDKDKLSRNDVIGKIYLSWKSGPGEVKHWKDMIARPRQPVAQWHQLK 137 (138)
T ss_dssp GGGGGGEEEEEEEEECCSSSCCEEEEEEEESSSSCHHHHHHHHHHHHSTTCCEEEEEECB
T ss_pred hhhcCceEEEEEEEECCCCCCCcEEEEEEEccccCChHHHHHHHHHhCCCCeEEEEeecC
Confidence 6666678899999999843 333 544 3222 22345899999999999999999763
No 46
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.49 E-value=2.9e-15 Score=162.27 Aligned_cols=114 Identities=17% Similarity=0.210 Sum_probs=21.2
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEeCCe-EEEeeeecCC---CCCccceEEEEeeccCCCCceEEEEEee-cCC
Q 008661 65 VAYARVEVVEASDMKPSDLNGLADPYVKGQLGPY-RFRTKTQRKT---LSPKWHEEFNIPISTWDSPNVLVIEVRD-KDH 139 (558)
Q Consensus 65 ~G~L~VtVieArdL~~~D~~G~sDPYVkV~Lgp~-k~KTkVikkT---lNPvWnEtF~F~V~~~e~~~tL~V~V~D-~D~ 139 (558)
.+.|+|+|++|++|+++| ||||+++++.. ..||+++++| +||+|||+|.|.+.+. ...|.|+||| +|.
T Consensus 10 ~~~L~V~VieAk~L~~~d-----dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~--~~~L~v~V~d~~d~ 82 (483)
T 3bxj_A 10 DNVLKLWIIEARELPPKK-----RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPA--VRALRLHLYRDSDK 82 (483)
T ss_dssp EECC--------------------------------------------------CCEECC--------------------
T ss_pred ccEEEEEEEEcCCcCCCC-----CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCC--ccEEEEEEEecCCc
Confidence 478999999999999876 99999999874 6799999999 9999999999997542 4789999999 452
Q ss_pred ---CC-CCccEEEEEecccccCCCceeeeeecCCC---------------------------CceEEEEEEEEEecc
Q 008661 140 ---FV-DDTLGDCTINISDLRDGQRHDMWIPLQNI---------------------------KIGRLHLAITVLEES 185 (558)
Q Consensus 140 ---~s-DDfIGev~IpL~eL~~~~~~e~W~~L~~k---------------------------~~GeL~LsL~y~p~~ 185 (558)
++ +++||.+.|+|..+..+...+.||+|... ..|.|+|++.|.+..
T Consensus 83 ~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~v~~~~~~ 159 (483)
T 3bxj_A 83 KRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKARYQTMS 159 (483)
T ss_dssp ------------------------CCEECC--------------------------------------CEEEEEECC
T ss_pred cccCCCCceEEEEEEEHHHhcCCCCCCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEEEEeeeee
Confidence 44 99999999999999988888999999531 247888888887653
No 47
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.48 E-value=2.6e-14 Score=130.28 Aligned_cols=116 Identities=15% Similarity=0.170 Sum_probs=86.7
Q ss_pred CceEEEEEEEEEeccCC----------------CCCCCCcceEEecccCCCCceeeEEEeEecCCCCCCccCCCceeec-
Q 008661 171 KIGRLHLAITVLEESAK----------------QGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSV- 233 (558)
Q Consensus 171 ~~GeL~LsL~y~p~~~~----------------l~lsDPyVKv~L~~~~~~~krlkKKKT~VkK~TlNPvwN~E~F~Fe- 233 (558)
..|+|+|++.|.+.... .+.+||||++++.. .+++..++||.++++|+||+|| |.|.|.
T Consensus 15 ~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~---~~~~~~~~kT~v~~~t~nP~wn-e~f~f~v 90 (153)
T 1w15_A 15 GRGELLVSLCYQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYH---AKKRISKKKTHVKKCTPNAVFN-ELFVFDI 90 (153)
T ss_dssp -CCEEEEEEEEETTTTEEEEEEEEEESCC------CCCEEEEEEEEE---TTEEEEEEECCCCCSCSSEEEE-EEEEEEC
T ss_pred cccEEEEEEEEcCCCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEe---CCeEeceEecCcccCCCCCeec-ceEEEEC
Confidence 45778888777665433 23479999999944 3556678899999999999999 999999
Q ss_pred CCCCCCCCceEEEEEeccC--cccc-ceE-EecC-CccccccCccccCCCCCcccceeecCC
Q 008661 234 SSEKSPKVADNFEPINIEG--QQET-GIW-VHQP-GSEVAQTWEPRKGKNRRLDTLVRRVPN 290 (558)
Q Consensus 234 p~e~l~~v~leveV~D~dG--~~e~-Gv~-v~~p-gt~~~~hW~~~l~~~r~~~~q~~~~~~ 290 (558)
+..++....+.|+|||++. .++. |.. +... .....+||.+++.+|++++++||.+-+
T Consensus 91 ~~~~l~~~~l~v~V~d~d~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~p~~~~~~Wh~L~~ 152 (153)
T 1w15_A 91 PCESLEEISVEFLVLDSERGSRNEVIGRLVLGATAEGSGGGHWKEICDFPRRQIAKWHMLCD 152 (153)
T ss_dssp CSSSSTTEEEEEEEEECCTTSCCEEEEEEEESTTCCSHHHHHHHHHHHSTTCCEEEEEECBC
T ss_pred CHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCCCCchHHHHHHHHHhCCCCeeeecccccc
Confidence 6667777899999999984 3333 544 2111 222348999999999999999998754
No 48
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.46 E-value=9e-14 Score=155.66 Aligned_cols=118 Identities=31% Similarity=0.507 Sum_probs=100.9
Q ss_pred CCceeEeeecCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC-----eEEEeeeecCCCCCccceEEEEeeccCCCC
Q 008661 53 PGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGP-----YRFRTKTQRKTLSPKWHEEFNIPISTWDSP 127 (558)
Q Consensus 53 ~~l~fSL~Yd~~~G~L~VtVieArdL~~~D~~G~sDPYVkV~Lgp-----~k~KTkVikkTlNPvWnEtF~F~V~~~e~~ 127 (558)
+.+.+++.| ..+.|.|+|++|++|+++|.+|.+||||++++.+ .+.+|+++++|+||.|||+|.|.+...+..
T Consensus 161 g~i~~~~~~--~~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~ 238 (674)
T 3pfq_A 161 GRIYIQAHI--DREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKD 238 (674)
T ss_dssp CEEEEEEEE--CSSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTT
T ss_pred cccccccee--ccceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCcc
Confidence 344555555 4688999999999999999999999999999933 578999999999999999999999865556
Q ss_pred ceEEEEEeecCCCC-CCccEEEEEecccccCCCceeeeeecCCCCce
Q 008661 128 NVLVIEVRDKDHFV-DDTLGDCTINISDLRDGQRHDMWIPLQNIKIG 173 (558)
Q Consensus 128 ~tL~V~V~D~D~~s-DDfIGev~IpL~eL~~~~~~e~W~~L~~k~~G 173 (558)
..|.|+|||+|.++ |++||.+.++|.++.... ...|+.|.....|
T Consensus 239 ~~L~v~v~d~d~~~~dd~iG~~~i~l~~l~~~~-~~~w~~Lls~~~g 284 (674)
T 3pfq_A 239 RRLSVEIWDWDLTSRNDFMGSLSFGISELQKAG-VDGWFKLLSQEEG 284 (674)
T ss_dssp CEEEEEEEECCSSSCCEECCBCCCBTTHHHHCC-EEEEEECBCTTGG
T ss_pred ceeeeEEeecccccccccccccccchhhhccCC-cccceeecccccc
Confidence 68999999999998 999999999999997654 5889999765444
No 49
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.45 E-value=5.9e-14 Score=128.86 Aligned_cols=116 Identities=18% Similarity=0.212 Sum_probs=87.9
Q ss_pred CceEEEEEEEEEeccCC----------------CCCCCCcceEEecccCCCCceeeEEEeEecCCCCCCccCCCceeec-
Q 008661 171 KIGRLHLAITVLEESAK----------------QGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSV- 233 (558)
Q Consensus 171 ~~GeL~LsL~y~p~~~~----------------l~lsDPyVKv~L~~~~~~~krlkKKKT~VkK~TlNPvwN~E~F~Fe- 233 (558)
..|+|+|+|.|.+..+. .+.+||||++++... +++..++||.++++|+||+|| |.|.|.
T Consensus 10 ~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~---~~~~~~~kT~v~~~t~nP~wn-e~f~f~v 85 (159)
T 1tjx_A 10 KLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQN---GKRLKKKKTTIKKNTLNPYYN-ESFSFEV 85 (159)
T ss_dssp CCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEET---TEEEEEEECCCCCSCSSCEEE-EEEEEEC
T ss_pred cCCeEEEEEEEcCCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeC---CceeceeeCceecCCCCCccc-ceEEEEc
Confidence 45777777777665433 234899999999543 556678999999999999999 999999
Q ss_pred CCCCCCCCceEEEEEeccCc--ccc-ceE-EecCCc-cccccCccccCCCCCcccceeecCC
Q 008661 234 SSEKSPKVADNFEPINIEGQ--QET-GIW-VHQPGS-EVAQTWEPRKGKNRRLDTLVRRVPN 290 (558)
Q Consensus 234 p~e~l~~v~leveV~D~dG~--~e~-Gv~-v~~pgt-~~~~hW~~~l~~~r~~~~q~~~~~~ 290 (558)
+..++....+.|+|||++.. ++. |.. +..... ...+||.+|+.+|++++++||.+-.
T Consensus 86 ~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~ 147 (159)
T 1tjx_A 86 PFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQV 147 (159)
T ss_dssp CGGGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECBC
T ss_pred CHHHhCCcEEEEEEEECCCCCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECcC
Confidence 56666678899999999853 333 544 322211 2348999999999999999998764
No 50
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.38 E-value=3.3e-13 Score=124.87 Aligned_cols=116 Identities=11% Similarity=0.110 Sum_probs=86.4
Q ss_pred CceEEEEEEEEEeccCC----------------CCCCCCcceEEecccCCCCceeeEEEeEecCCCCCCccCCCceeec-
Q 008661 171 KIGRLHLAITVLEESAK----------------QGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSV- 233 (558)
Q Consensus 171 ~~GeL~LsL~y~p~~~~----------------l~lsDPyVKv~L~~~~~~~krlkKKKT~VkK~TlNPvwN~E~F~Fe- 233 (558)
..|+|+|++.|.+.... .+.+||||++++... ..+..++||.++++|+||+|| |.|.|.
T Consensus 22 ~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~---~~~~~~~kT~v~~~t~nP~wn-e~f~f~v 97 (166)
T 2cm5_A 22 ERGKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPD---MGKKAKHKTQIKKKTLNPEFN-EEFFYDI 97 (166)
T ss_dssp CCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC------CCEEECCCCCSCSSCEEE-EEEEEEC
T ss_pred ccceEEEEEEEECCCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECC---CCccceEeCCcccCCCCCccc-ceEEEEc
Confidence 46888888888765433 234899999999543 344678999999999999999 999999
Q ss_pred CCCCCCCCceEEEEEeccCc--ccc-ceE-EecCC-ccccccCccccCCCCCcccceeecCC
Q 008661 234 SSEKSPKVADNFEPINIEGQ--QET-GIW-VHQPG-SEVAQTWEPRKGKNRRLDTLVRRVPN 290 (558)
Q Consensus 234 p~e~l~~v~leveV~D~dG~--~e~-Gv~-v~~pg-t~~~~hW~~~l~~~r~~~~q~~~~~~ 290 (558)
+...+....+.|+|||++.. ++. |.. +.... ....+||.+++.+++.++++||.+-.
T Consensus 98 ~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~W~~l~~~~~~~~~~Wh~L~~ 159 (166)
T 2cm5_A 98 KHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKKIERWHQLQN 159 (166)
T ss_dssp CGGGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHCTTCCEEEEEECBC
T ss_pred chHhcCCCEEEEEEEECCCCCCCcEEEeEEEecccCCchhHHHHHHHhCCCCcceEeeECCC
Confidence 55566678999999999843 333 544 22211 22348999999999999999998863
No 51
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.19 E-value=4.4e-11 Score=137.90 Aligned_cols=163 Identities=19% Similarity=0.259 Sum_probs=108.8
Q ss_pred cCCCCCccCC----ccHHHHHHHHHHH--HHHhccccCceeEeeccccCCCCCCceeEeeecCCceEEEEEEEEecCCCC
Q 008661 7 FTHGLDVTEF----PGIAGWLDKLLSI--AFEQTLVEPNMLVVDVDKFASPQPGNWFSVDVKEPVAYARVEVVEASDMKP 80 (558)
Q Consensus 7 ~t~G~DVm~i----PGLs~fl~~lI~~--al~~~lV~Pn~l~Ipl~k~~s~~~~l~fSL~Yd~~~G~L~VtVieArdL~~ 80 (558)
+.+|.-|.++ +|+.=+|..-+-. .-.++.+-|..+--+. ..+.|.... .+. ......|.|+|++|++|+.
T Consensus 664 W~~G~QmVALN~QT~d~~m~lN~g~F~~nG~cGYVLKP~~lr~~~-~~f~p~~~~--~~~-~~~~~~L~V~Visaq~L~~ 739 (885)
T 3ohm_B 664 WNVGCQLVALNFQTLDVAMQLNAGVFEYNGRSGYLLKPEFMRRPD-KSFDPFTEV--IVD-GIVANALRVKVISGQFLSD 739 (885)
T ss_dssp HTTTCSEECBCTTCCSHHHHHHHHHHTTGGGCSEEECCGGGTCTT-CCCCTTCSS--CCT-TCCCEEEEEEEEEEESCCS
T ss_pred cccCceeeeecCCCCCcccchhhhhhccCCceeeeecCHHHcCCC-cCcCCCcCc--ccC-cccceEEEEEEEEeccCcc
Confidence 5667766665 5777666655532 2233345554442111 111110000 000 0123589999999999975
Q ss_pred CCCCCCCCcEEEEEeCC------eEEEeeeecC-CCCCccce-EEEEe-eccCCCCceEEEEEeecCCCCCCccEEEEEe
Q 008661 81 SDLNGLADPYVKGQLGP------YRFRTKTQRK-TLSPKWHE-EFNIP-ISTWDSPNVLVIEVRDKDHFVDDTLGDCTIN 151 (558)
Q Consensus 81 ~D~~G~sDPYVkV~Lgp------~k~KTkVikk-TlNPvWnE-tF~F~-V~~~e~~~tL~V~V~D~D~~sDDfIGev~Ip 151 (558)
. .+||||+|.+.+ .+++|+++++ ++||+||| +|.|. |... ....|+|+|||+| ++|||++.||
T Consensus 740 ~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~p-ela~Lrf~V~D~d---ddfiG~~~lp 811 (885)
T 3ohm_B 740 R----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLP-TLASLRIAAFEEG---GKFVGHRILP 811 (885)
T ss_dssp S----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCG-GGCEEEEEEEETT---TEEEEEEEEE
T ss_pred c----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcC-CcCEEEEEEEcCC---ccEEeeEEEE
Confidence 3 589999999953 3579999975 69999999 69998 6532 2348999999987 8899999999
Q ss_pred cccccCCCceeeeeecCCC-----CceEEEEEEEEEec
Q 008661 152 ISDLRDGQRHDMWIPLQNI-----KIGRLHLAITVLEE 184 (558)
Q Consensus 152 L~eL~~~~~~e~W~~L~~k-----~~GeL~LsL~y~p~ 184 (558)
|..|..+.+ +++|.+. ..|.|.|.+.+..-
T Consensus 812 L~~L~~GyR---~vpL~~~~g~~l~~atLfv~i~~~~~ 846 (885)
T 3ohm_B 812 VSAIRSGYH---YVCLRNEANQPLCLPALLIYTEASDY 846 (885)
T ss_dssp TTTCCCEEE---EEEEECTTSCEEEEEEEEEEEEEEEC
T ss_pred HHHcCCCce---EEEecCCCCCccCceEEEEEEEEEec
Confidence 999987654 5666542 35889999988753
No 52
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.17 E-value=7.2e-11 Score=135.20 Aligned_cols=108 Identities=21% Similarity=0.321 Sum_probs=84.9
Q ss_pred CceEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC------eEEEee-eec-CCCCCccce-EEEE-eeccCCCCceEEEE
Q 008661 64 PVAYARVEVVEASDMKPSDLNGLADPYVKGQLGP------YRFRTK-TQR-KTLSPKWHE-EFNI-PISTWDSPNVLVIE 133 (558)
Q Consensus 64 ~~G~L~VtVieArdL~~~D~~G~sDPYVkV~Lgp------~k~KTk-Vik-kTlNPvWnE-tF~F-~V~~~e~~~tL~V~ 133 (558)
..+.|.|+|++|++|+. +.+||||+|.+.. .+++|+ +++ +++||+||| +|.| .+...+ ...|+|.
T Consensus 676 ~~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~e-l~~Lr~~ 750 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPE-LASLRVA 750 (799)
T ss_dssp TCEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGG-GCEEEEE
T ss_pred eeeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCC-ccEEEEE
Confidence 35789999999999975 4689999999932 367999 776 579999999 6999 776422 3489999
Q ss_pred EeecCCCCCCccEEEEEecccccCCCceeeeeecCCC-----CceEEEEEEEEE
Q 008661 134 VRDKDHFVDDTLGDCTINISDLRDGQRHDMWIPLQNI-----KIGRLHLAITVL 182 (558)
Q Consensus 134 V~D~D~~sDDfIGev~IpL~eL~~~~~~e~W~~L~~k-----~~GeL~LsL~y~ 182 (558)
|||+| +++||++.|||..|..+. .|++|.+. ..+.|.+.+.+.
T Consensus 751 V~D~d---~d~iG~~~ipl~~L~~G~---r~v~L~~~~g~~~~~~~Lfv~i~~~ 798 (799)
T 2zkm_X 751 VMEEG---NKFLGHRIIPINALNSGY---HHLCLHSESNMPLTMPALFIFLEMK 798 (799)
T ss_dssp EEETT---TEEEEEEEEEGGGBCCEE---EEEEEECTTCCEEEEEEEEEEEEEE
T ss_pred EEEeC---CCccceEeeehhhcCCCc---EEEeccCCCCCCCCceEEEEEEEEE
Confidence 99997 789999999999998764 46777542 236677777663
No 53
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.16 E-value=1.3e-10 Score=133.12 Aligned_cols=110 Identities=18% Similarity=0.332 Sum_probs=88.2
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC-------eEEEeeeecC-CCCCccceE-EEEe-eccCCCCceEEEEE
Q 008661 65 VAYARVEVVEASDMKPSDLNGLADPYVKGQLGP-------YRFRTKTQRK-TLSPKWHEE-FNIP-ISTWDSPNVLVIEV 134 (558)
Q Consensus 65 ~G~L~VtVieArdL~~~D~~G~sDPYVkV~Lgp-------~k~KTkVikk-TlNPvWnEt-F~F~-V~~~e~~~tL~V~V 134 (558)
.+.|+|+|++|++|+.. .+||||+|.+.. .+++|+++++ ++||+|||+ |.|. +...+ -..|+|.|
T Consensus 649 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pe-la~Lrf~V 723 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPD-LAVVRIIV 723 (816)
T ss_dssp CEEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGG-GCEEEEEE
T ss_pred ceEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCC-ccEEEEEE
Confidence 47899999999999753 589999999954 5679999885 699999998 9998 65322 35899999
Q ss_pred eecCCCCCCccEEEEEecccccCCCceeeeeecCCC-----CceEEEEEEEEEecc
Q 008661 135 RDKDHFVDDTLGDCTINISDLRDGQRHDMWIPLQNI-----KIGRLHLAITVLEES 185 (558)
Q Consensus 135 ~D~D~~sDDfIGev~IpL~eL~~~~~~e~W~~L~~k-----~~GeL~LsL~y~p~~ 185 (558)
||++ +++||++.|||..|..+.+ +++|.+. ..+.|.+.+.+....
T Consensus 724 ~D~d---ddfiG~~~ipL~~L~~GyR---~vpL~~~~g~~~~~atLfv~i~~~~~~ 773 (816)
T 3qr0_A 724 SEEN---GKFIGHRVMPLDGIKPGYR---HVPLRNESNRPLGLASVFAHIVAKDYV 773 (816)
T ss_dssp EETT---SCEEEEEEEESTTCCCEEE---EEEEECTTSCEEEEEEEEEEEEEEECC
T ss_pred EecC---CCeeeEEEEEHHHcCCcce---EEEEeCCCCCCCCceEEEEEEEEEecC
Confidence 9985 7899999999999988754 5677553 237888888876543
No 54
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=99.06 E-value=1.8e-09 Score=97.42 Aligned_cols=110 Identities=15% Similarity=0.321 Sum_probs=87.1
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEeCCeE----EEe-eeecCCCCCccceEEEEeeccCCCCceEEEEEeecCC
Q 008661 65 VAYARVEVVEASDMKPSDLNGLADPYVKGQLGPYR----FRT-KTQRKTLSPKWHEEFNIPISTWDSPNVLVIEVRDKDH 139 (558)
Q Consensus 65 ~G~L~VtVieArdL~~~D~~G~sDPYVkV~Lgp~k----~KT-kVikkTlNPvWnEtF~F~V~~~e~~~tL~V~V~D~D~ 139 (558)
...|+|.+.++.--+-+......||||.|.+.... .+| .++++|+.|+|||+|.-.+.. .+.|.|.|++...
T Consensus 5 ~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~---Gr~l~i~Vfh~a~ 81 (126)
T 1yrk_A 5 APFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE---GRVIQIVLMRAAE 81 (126)
T ss_dssp CCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT---TCEEEEEEEEETT
T ss_pred CccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC---CEEEEEEEEcCCC
Confidence 35688888666532222234568999999996532 355 778899999999999999986 6799999996554
Q ss_pred CCCCccEEEEEeccccc-----CCCceeeeeecCCCCceEEEEEEEEE
Q 008661 140 FVDDTLGDCTINISDLR-----DGQRHDMWIPLQNIKIGRLHLAITVL 182 (558)
Q Consensus 140 ~sDDfIGev~IpL~eL~-----~~~~~e~W~~L~~k~~GeL~LsL~y~ 182 (558)
+|+..|.|++.+|. .+...+.|++|++ .|+|++.+.|.
T Consensus 82 ---~fvAn~tV~~edL~~~c~~~~g~~e~WvdLeP--~Gkl~~~i~~~ 124 (126)
T 1yrk_A 82 ---EPVSEVTVGVSVLAERCKKNNGKAEFWLDLQP--QAKVLMSVQYF 124 (126)
T ss_dssp ---EEEEEEEEEHHHHHHHHHTTTTEEEEEEECBS--SCEEEEEEEEE
T ss_pred ---CeeeEEEEEHHHHHhhhccCCCceEEEEeccc--CcEEEEEEEEe
Confidence 89999999999997 4556799999995 89999999986
No 55
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.02 E-value=1.1e-09 Score=98.55 Aligned_cols=60 Identities=8% Similarity=0.077 Sum_probs=50.1
Q ss_pred CCCCCCcceEEecccCCCCceeeEEEeEecCCCCCCccCCCceeec-CCCCCCCCceEEEEEeccC
Q 008661 188 QGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSV-SSEKSPKVADNFEPINIEG 252 (558)
Q Consensus 188 l~lsDPyVKv~L~~~~~~~krlkKKKT~VkK~TlNPvwN~E~F~Fe-p~e~l~~v~leveV~D~dG 252 (558)
.+.+||||++++.+. ....++||.++++|+||+|| |.|.|. +.+++....+.|+|||++.
T Consensus 41 ~g~sDPyv~v~l~~~----~~~~~~kT~v~~~tlnP~wn-E~f~f~v~~~~l~~~~L~~~V~d~d~ 101 (138)
T 1wfm_A 41 DGGCDCYVQGSVANR----TGSVEAQTALKKRQLHTTWE-EGLVLPLAEEELPTATLTLTLRTCDR 101 (138)
T ss_dssp SSCCCEEEEEEEEET----TEEEEEECCCCCCCSSEECS-SCEEEECCTTSSTTCEEEEEEEECCS
T ss_pred CCCcceEEEEEEEcC----CCcccEecccCcCCCCCcCC-ceEEEEecHHHcCCCEEEEEEEECCC
Confidence 455899999999432 12456899999999999999 999999 7777788899999999984
No 56
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=99.02 E-value=2.2e-09 Score=98.18 Aligned_cols=111 Identities=18% Similarity=0.385 Sum_probs=88.5
Q ss_pred ceEEEEEEEEecCCCCCC-CCCCCCcEEEEEeCCe----EEEe-eeecCCCCCccceEEEEeeccCCCCceEEEEEeecC
Q 008661 65 VAYARVEVVEASDMKPSD-LNGLADPYVKGQLGPY----RFRT-KTQRKTLSPKWHEEFNIPISTWDSPNVLVIEVRDKD 138 (558)
Q Consensus 65 ~G~L~VtVieArdL~~~D-~~G~sDPYVkV~Lgp~----k~KT-kVikkTlNPvWnEtF~F~V~~~e~~~tL~V~V~D~D 138 (558)
...|+|.+.++.-.+-+. .....||||.|.+... ..+| .++++|..|+|||+|.-.|.. .+.|.|.|++..
T Consensus 9 ~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~---Gr~l~i~Vfh~a 85 (138)
T 2enj_A 9 SPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK---GRVMQIIVKGKN 85 (138)
T ss_dssp CCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS---SCEEEEEEECSS
T ss_pred CcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC---CeEEEEEEEcCC
Confidence 356888887765433322 2346899999999652 2677 777889999999999999986 679999999544
Q ss_pred CCCCCccEEEEEeccccc-----CCCceeeeeecCCCCceEEEEEEEEEe
Q 008661 139 HFVDDTLGDCTINISDLR-----DGQRHDMWIPLQNIKIGRLHLAITVLE 183 (558)
Q Consensus 139 ~~sDDfIGev~IpL~eL~-----~~~~~e~W~~L~~k~~GeL~LsL~y~p 183 (558)
. +|+..|.|++.+|. .+...+.|++|++ .|+|++.+.|.-
T Consensus 86 ~---~fVAn~tV~~edL~~~ck~~~g~~e~WvdLeP--~Gkl~v~i~~~~ 130 (138)
T 2enj_A 86 V---DLISETTVELYSLAERCRKNNGKTEIWLELKP--QGRMLMNARYFL 130 (138)
T ss_dssp C---SCCEEEEEESHHHHHHHHHTTTCEEEEEECBS--SCEEEEEEEECC
T ss_pred C---CeeeEEEEEHHHHHhhhccCCCceEEEEeccc--CcEEEEEEEEEE
Confidence 4 89999999999997 4556799999995 899999999964
No 57
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=98.97 E-value=1.1e-10 Score=108.00 Aligned_cols=79 Identities=8% Similarity=-0.068 Sum_probs=59.9
Q ss_pred CceEEEEEEEEEeccCC----------------CCCCCCcceEEecccCCCCceeeEEEeEecCCCCCCccCCCceeec-
Q 008661 171 KIGRLHLAITVLEESAK----------------QGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSV- 233 (558)
Q Consensus 171 ~~GeL~LsL~y~p~~~~----------------l~lsDPyVKv~L~~~~~~~krlkKKKT~VkK~TlNPvwN~E~F~Fe- 233 (558)
..|+|+++|.|.+.... .+.+||||++++... .+.+..++||.++++|+||+|| |.|.|.
T Consensus 28 ~~G~l~~sl~y~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~--~~~~~~~~kT~v~~~tlnP~wn-E~F~f~v 104 (155)
T 2z0u_A 28 GATRIQIALKYDEKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPC--SESTTCLFRTRPLDASDTLVFN-EVFWVSM 104 (155)
T ss_dssp CCEEEEEEEEEETTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESC--SCHHHHEEECCCEECCSSEEEE-EEEEEEC
T ss_pred CcEEEEEEEEEcCCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecC--CCCCccceeCCcCCCCCCCccc-cEEEEEc
Confidence 45777777777654432 234899999999542 2233457899999999999999 999999
Q ss_pred CCCCCCCCceEEEEEeccC
Q 008661 234 SSEKSPKVADNFEPINIEG 252 (558)
Q Consensus 234 p~e~l~~v~leveV~D~dG 252 (558)
+.+++....+.|+|||++.
T Consensus 105 ~~~~l~~~~L~~~V~d~d~ 123 (155)
T 2z0u_A 105 SYPALHQKTLRVDVCTTDR 123 (155)
T ss_dssp CHHHHHHCEEEEEEEEECT
T ss_pred CHHHhCcCEEEEEEEECCC
Confidence 5556667899999999984
No 58
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.89 E-value=1e-09 Score=98.36 Aligned_cols=77 Identities=19% Similarity=0.236 Sum_probs=58.6
Q ss_pred CceEEEEEEEEEeccCC----------------CCCCCCcceEEecccCCCCceeeEEEeEecCCCCCCccCCCceeec-
Q 008661 171 KIGRLHLAITVLEESAK----------------QGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSV- 233 (558)
Q Consensus 171 ~~GeL~LsL~y~p~~~~----------------l~lsDPyVKv~L~~~~~~~krlkKKKT~VkK~TlNPvwN~E~F~Fe- 233 (558)
..|+|+|++.|.+.... .+ +||||++++... +++..++||.++++|+||+|| |.|.|.
T Consensus 9 ~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~---~~~~~~~kT~v~~~t~nP~wn-e~f~f~v 83 (142)
T 2dmg_A 9 PLGQIQLTIRHSSQRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPD---KRRSGRRKTHVSKKTLNPVFD-QSFDFSV 83 (142)
T ss_dssp SSCEEEEEEEEETTTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESC---CCSSSCEECCCCCSCSSCEEE-EEEEECC
T ss_pred CcceEEEEEEEeCCCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcC---CCCCCcccCCccCCCCCCCcC-ceEEEEe
Confidence 34667666666544332 34 799999999543 445678899999999999999 999998
Q ss_pred CCCCCCCCceEEEEEeccC
Q 008661 234 SSEKSPKVADNFEPINIEG 252 (558)
Q Consensus 234 p~e~l~~v~leveV~D~dG 252 (558)
+.+++....+.|+|||++.
T Consensus 84 ~~~~l~~~~L~i~V~d~d~ 102 (142)
T 2dmg_A 84 SLPEVQRRTLDVAVKNSGG 102 (142)
T ss_dssp CHHHHHHCEEEEEEEECCC
T ss_pred cHHHhCcCEEEEEEEECCC
Confidence 4455566789999999984
No 59
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=98.88 E-value=1.1e-09 Score=100.06 Aligned_cols=106 Identities=12% Similarity=-0.034 Sum_probs=72.8
Q ss_pred CceEEEEEEEEEeccCC---------------CCCCCCcceEEecccCCCCceeeEEEeEecCCCCCCccCCCceeec-C
Q 008661 171 KIGRLHLAITVLEESAK---------------QGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSV-S 234 (558)
Q Consensus 171 ~~GeL~LsL~y~p~~~~---------------l~lsDPyVKv~L~~~~~~~krlkKKKT~VkK~TlNPvwN~E~F~Fe-p 234 (558)
..|+|.|+|+|.+..+. .+.+||||++++... .....++||.++++|+||+|| |.|.|. +
T Consensus 12 ~~G~~~lsL~y~~~~~~L~V~v~~a~~L~~~d~g~~Dpyv~v~l~~~---~~~~~~~kT~v~~~t~nP~wn-e~f~f~v~ 87 (153)
T 3fbk_A 12 VQGAGQLRLSIDAQDRVLLLHIIEGKGLISKQPGTCDPYVKISLIPE---DSRLRHQKTQTVPDCRDPAFH-EHFFFPVQ 87 (153)
T ss_dssp -CCCCEEEEEEEESSSEEEEEEEEEESCCCCSSSCCCEEEEEEEESC---SCCTTCEECCCCTTCSSCEEE-EEEEEECC
T ss_pred CCCEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCEEEEEEEEcC---CCCccEEeccccCCCCCCccc-cEEEEecc
Confidence 46777788887776544 134799999999543 345577899999999999999 999998 4
Q ss_pred CCCCCCCceEEEEEeccCcc---cc-ceEEecCCccccccCccccCCCCCcccceeecCC
Q 008661 235 SEKSPKVADNFEPINIEGQQ---ET-GIWVHQPGSEVAQTWEPRKGKNRRLDTLVRRVPN 290 (558)
Q Consensus 235 ~e~l~~v~leveV~D~dG~~---e~-Gv~v~~pgt~~~~hW~~~l~~~r~~~~q~~~~~~ 290 (558)
...+.. .+.|+|||++... +. |-.. -+-. .+.++..+.++||.+.+
T Consensus 88 ~~~~~~-~L~i~V~d~d~~~~~d~~lG~~~-i~l~--------~l~~~~~~~~~W~~L~~ 137 (153)
T 3fbk_A 88 EEDDQK-RLLVTVWNRASQSRQSGLIGCMS-FGVK--------SLLTPDKEISGWYYLLG 137 (153)
T ss_dssp GGGTTS-EEEEEEEECCSSGGGCEEEEEEE-EEHH--------HHTC--CCEEEEEECBC
T ss_pred cHHhCC-EEEEEEEeCCCCCCCCcEEEEEE-EEHH--------HhcCCCCccccEEECCC
Confidence 455544 4999999998532 22 4331 1111 14456678889998864
No 60
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=98.86 E-value=2.7e-09 Score=95.25 Aligned_cols=76 Identities=16% Similarity=0.167 Sum_probs=58.3
Q ss_pred ceEEEEEEEEEeccCC----------------C-CCCCCcceEEecccCCCCceeeEEEeEecCCCCCCccCCCceeec-
Q 008661 172 IGRLHLAITVLEESAK----------------Q-GVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSV- 233 (558)
Q Consensus 172 ~GeL~LsL~y~p~~~~----------------l-~lsDPyVKv~L~~~~~~~krlkKKKT~VkK~TlNPvwN~E~F~Fe- 233 (558)
.|+|+|++.|.+.... . +.+||||++++... + ..++||.++++|+||+|| |.|.|.
T Consensus 8 ~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~---~--~~~~kT~v~~~t~nP~wn-e~f~f~~ 81 (138)
T 1ugk_A 8 LGTLFFSLEYNFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPE---K--KHKVKTRVLRKTLDPAFD-ETFTFYG 81 (138)
T ss_dssp CCEEEEEEEEEGGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETT---T--CSEEECCCCSSCSSCEEE-EEEEEEC
T ss_pred cEEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecC---C--CceEecCcCcCCCCCcEe-eEEEEcC
Confidence 5677777776554322 1 45899999999542 1 267899999999999999 999994
Q ss_pred -CCCCCCCCceEEEEEeccCc
Q 008661 234 -SSEKSPKVADNFEPINIEGQ 253 (558)
Q Consensus 234 -p~e~l~~v~leveV~D~dG~ 253 (558)
+.+++....+.|+|||++..
T Consensus 82 v~~~~~~~~~l~i~V~d~d~~ 102 (138)
T 1ugk_A 82 IPYTQIQELALHFTILSFDRF 102 (138)
T ss_dssp CCSTTGGGCEEEEEEEEECSS
T ss_pred cCHHHhccCEEEEEEEECCCC
Confidence 66777788999999999843
No 61
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=98.86 E-value=8.5e-10 Score=98.86 Aligned_cols=104 Identities=10% Similarity=0.102 Sum_probs=70.1
Q ss_pred CceEEEEEEEEEeccCC----------------CCCCCCcceEEecccCCCCceeeEEEeEecCCCCCCccCCCceeec-
Q 008661 171 KIGRLHLAITVLEESAK----------------QGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSV- 233 (558)
Q Consensus 171 ~~GeL~LsL~y~p~~~~----------------l~lsDPyVKv~L~~~~~~~krlkKKKT~VkK~TlNPvwN~E~F~Fe- 233 (558)
..|+|.+++.|.+.... .+.+||||++++.. ...+..++||.++++++||+|| |.|.|.
T Consensus 14 ~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~---~~~~~~~~kT~v~~~t~nP~wn-e~f~f~~ 89 (142)
T 2chd_A 14 TLGALEFSLLYDQDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLP---GASKSNKLRTKTLRNTRNPVWN-ETLQYHG 89 (142)
T ss_dssp CCCEEEEEEEEEGGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEES---CCSGGGEEECCCCCSCSSCEEE-EEEEEES
T ss_pred ccceEEEEEEEeCCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEc---CCCCcceeeCCcCCCCCCCcCc-CEEEEcc
Confidence 35777777777544332 23479999999954 2345678899999999999999 899997
Q ss_pred CC-CCCCCCceEEEEEeccCc--ccc-ceE-E--ecCCccccccCccccCCC
Q 008661 234 SS-EKSPKVADNFEPINIEGQ--QET-GIW-V--HQPGSEVAQTWEPRKGKN 278 (558)
Q Consensus 234 p~-e~l~~v~leveV~D~dG~--~e~-Gv~-v--~~pgt~~~~hW~~~l~~~ 278 (558)
.. +.+....+.|+|||++.. ++. |.. + ..-..+..++|..+|.+|
T Consensus 90 ~~~~~~~~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~p 141 (142)
T 2chd_A 90 ITEEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKANQRKNFNICLERV 141 (142)
T ss_dssp CCHHHHHHCEEEEEEEEECTTSCEEEEEEEEEEGGGCCTTCCEEEEEECBCC
T ss_pred cCHHHccCCEEEEEEEECCCCCCCcEEEEEEEEHHHcCCCCccEEEEecccC
Confidence 32 334457899999999843 333 543 2 111222346788777665
No 62
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=98.82 E-value=2.4e-09 Score=96.86 Aligned_cols=79 Identities=11% Similarity=0.116 Sum_probs=61.1
Q ss_pred CceEEEEEEEEEeccCC-----------------CCCCCCcceEEecccCCCCceeeEEEeEecCCCCCCccCCCceeec
Q 008661 171 KIGRLHLAITVLEESAK-----------------QGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSV 233 (558)
Q Consensus 171 ~~GeL~LsL~y~p~~~~-----------------l~lsDPyVKv~L~~~~~~~krlkKKKT~VkK~TlNPvwN~E~F~Fe 233 (558)
..|+|+|+++|.+..+. .+.+||||++++.+. +.+..++||.++++|+||+|| |.|.|.
T Consensus 8 ~~G~l~~sl~y~~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~---~~~~~~~kT~v~~~t~nP~wn-e~f~f~ 83 (148)
T 3fdw_A 8 VTGRIAFSLKYEQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPD---KSRQGKRKTSIKRDTVNPLYD-ETLRYE 83 (148)
T ss_dssp CCCEEEEEEEEETTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETC---CSGGGEEECCCCSSCSSCEEE-EEEEEE
T ss_pred cceEEEEEEEEeCCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcC---CcccCccccccCCCCCCCcEe-eEEEEE
Confidence 35677777776654332 234899999999543 445678999999999999999 999999
Q ss_pred -CCCCCCCCceEEEEEeccCc
Q 008661 234 -SSEKSPKVADNFEPINIEGQ 253 (558)
Q Consensus 234 -p~e~l~~v~leveV~D~dG~ 253 (558)
+...+....+.|+|||++..
T Consensus 84 v~~~~~~~~~L~~~V~d~d~~ 104 (148)
T 3fdw_A 84 IPESLLAQRTLQFSVWHHGRF 104 (148)
T ss_dssp CCSTTGGGCEEEEEEEEECGG
T ss_pred eChhHhCceEEEEEEEECCCC
Confidence 66777778899999999843
No 63
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=98.82 E-value=4.2e-09 Score=93.72 Aligned_cols=79 Identities=5% Similarity=-0.027 Sum_probs=59.8
Q ss_pred CceEEEEEEEEEeccCC----------------CCCCCCcceEEecccCCCCceeeEEEeEecCCCCCCccCCCceeec-
Q 008661 171 KIGRLHLAITVLEESAK----------------QGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSV- 233 (558)
Q Consensus 171 ~~GeL~LsL~y~p~~~~----------------l~lsDPyVKv~L~~~~~~~krlkKKKT~VkK~TlNPvwN~E~F~Fe- 233 (558)
..|+|+|++.|.+.... .+.+||||++++... .....++||.++++|+||+|| |.|.|.
T Consensus 6 ~~G~i~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~---~~~~~~~kT~~~~~t~nP~wn-e~f~f~~ 81 (141)
T 1v27_A 6 SGGQLSIKLWFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPD---RSDKNKRRTKTVKKTLEPKWN-QTFIYSP 81 (141)
T ss_dssp CCCEEEEEEEEETTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSC---CSSSSCCBCCCCSSCSSCCCC-CCCEECS
T ss_pred cccEEEEEEEEeCCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecC---CCCCcceeCccccCCCCCccc-cEEEEcc
Confidence 35777777777654432 234799999999432 334567899999999999999 999998
Q ss_pred -CCCCCCCCceEEEEEeccCc
Q 008661 234 -SSEKSPKVADNFEPINIEGQ 253 (558)
Q Consensus 234 -p~e~l~~v~leveV~D~dG~ 253 (558)
+.+++....+.|+|||++..
T Consensus 82 ~~~~~~~~~~l~i~V~d~d~~ 102 (141)
T 1v27_A 82 VHRREFRERMLEITLWDQARV 102 (141)
T ss_dssp CCTTGGGTCEEEEEEEEBCSS
T ss_pred CCHHHhcCCEEEEEEEECCCC
Confidence 34566778999999999854
No 64
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=98.75 E-value=5.5e-09 Score=91.71 Aligned_cols=78 Identities=5% Similarity=-0.017 Sum_probs=57.9
Q ss_pred ceEEEEEEEEEeccCC----------------CCCCCCcceEEecccCCCCceeeEEEeEecCCCCCCccCCCceeec--
Q 008661 172 IGRLHLAITVLEESAK----------------QGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSV-- 233 (558)
Q Consensus 172 ~GeL~LsL~y~p~~~~----------------l~lsDPyVKv~L~~~~~~~krlkKKKT~VkK~TlNPvwN~E~F~Fe-- 233 (558)
.|+|+|++.|.+.... .+.+|||+++++... +....++||.++++|+||+|| |.|.|.
T Consensus 4 ~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~---~~~~~~~kT~v~~~t~nP~wn-e~f~f~~~ 79 (129)
T 2bwq_A 4 SGQLSIKLWFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPD---RSDKNKRRTKTVKKTLEPKWN-QTFIYSPV 79 (129)
T ss_dssp CCEEEEEEEEETTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESS---CSGGGEEECCCCSSBSSCEEE-EEEEECSC
T ss_pred eEEEEEEEEEccCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecC---CCCCcceecccccCCCCCccc-cEEEEccC
Confidence 4677777777655432 234799999999543 344678899999999999999 999998
Q ss_pred CCCCCCCCceEEEEEeccCc
Q 008661 234 SSEKSPKVADNFEPINIEGQ 253 (558)
Q Consensus 234 p~e~l~~v~leveV~D~dG~ 253 (558)
+.+.+....+.++|||++..
T Consensus 80 ~~~~~~~~~l~~~V~d~d~~ 99 (129)
T 2bwq_A 80 HRREFRERMLEITLWDQARV 99 (129)
T ss_dssp CGGGGGGCEEEEEEEEC---
T ss_pred CHHHhcCCeEEEEEEECCcC
Confidence 33566778999999999854
No 65
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=98.74 E-value=3.3e-09 Score=95.16 Aligned_cols=77 Identities=10% Similarity=0.109 Sum_probs=59.0
Q ss_pred CceEEEEEEEEEeccCC----------------CCCCCCcceEEecccCCCCceeeEEEeEecCCCCCCccCCCceeec-
Q 008661 171 KIGRLHLAITVLEESAK----------------QGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSV- 233 (558)
Q Consensus 171 ~~GeL~LsL~y~p~~~~----------------l~lsDPyVKv~L~~~~~~~krlkKKKT~VkK~TlNPvwN~E~F~Fe- 233 (558)
..|+|++++.|.+.... .+.+||||++++... + .+++||.++++|+||+|| |.|.|.
T Consensus 19 ~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~---~--~~~~kT~v~~~t~nP~wn-e~f~f~v 92 (143)
T 3f04_A 19 KLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPD---K--KKKFETKVHRKTLNPVFN-EQFTFKV 92 (143)
T ss_dssp CCCEEEEEEEEETTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESC---C--SCCEECCCCCSCSSCEEE-EEEEECC
T ss_pred CeEEEEEEEEEeCCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECC---C--CccEECccCcCCCCCcCc-CeEEEee
Confidence 46777777777655433 234899999999433 2 247899999999999999 999998
Q ss_pred CCCCCCCCceEEEEEeccCc
Q 008661 234 SSEKSPKVADNFEPINIEGQ 253 (558)
Q Consensus 234 p~e~l~~v~leveV~D~dG~ 253 (558)
+...+....+.|+|||++..
T Consensus 93 ~~~~l~~~~L~i~V~d~d~~ 112 (143)
T 3f04_A 93 PYSELGGKTLVMAVYDFDRF 112 (143)
T ss_dssp CHHHHTTCEEEEEEEECCSS
T ss_pred cHhhcCCCEEEEEEEeCCCC
Confidence 55556668899999999853
No 66
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=98.73 E-value=3.7e-09 Score=96.19 Aligned_cols=77 Identities=10% Similarity=0.109 Sum_probs=59.0
Q ss_pred CceEEEEEEEEEeccCC----------------CCCCCCcceEEecccCCCCceeeEEEeEecCCCCCCccCCCceeec-
Q 008661 171 KIGRLHLAITVLEESAK----------------QGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSV- 233 (558)
Q Consensus 171 ~~GeL~LsL~y~p~~~~----------------l~lsDPyVKv~L~~~~~~~krlkKKKT~VkK~TlNPvwN~E~F~Fe- 233 (558)
..|+|+++|.|.+.... .+.+||||++++... + .+++||.++++|+||+|| |.|.|.
T Consensus 27 ~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~---~--~~~~kT~v~~~t~nP~wn-e~f~f~v 100 (152)
T 1rsy_A 27 KLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPD---K--KKKFETKVHRKTLNPVFN-EQFTFKV 100 (152)
T ss_dssp CCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETT---C--CSCEECCCCTTCSSCEEE-EEEEECC
T ss_pred CceEEEEEEEEeCCCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcC---C--CceEeccccCCCCCCcCc-ccEEEee
Confidence 45788888887655432 234799999999532 1 256899999999999999 999998
Q ss_pred CCCCCCCCceEEEEEeccCc
Q 008661 234 SSEKSPKVADNFEPINIEGQ 253 (558)
Q Consensus 234 p~e~l~~v~leveV~D~dG~ 253 (558)
+..++....+.|+|||++..
T Consensus 101 ~~~~l~~~~L~i~V~d~d~~ 120 (152)
T 1rsy_A 101 PYSELGGKTLVMAVYDFDRF 120 (152)
T ss_dssp CHHHHTTCEEEEEEEECCSS
T ss_pred cHHHcCCCEEEEEEEECCCC
Confidence 54555678899999999853
No 67
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.73 E-value=7.8e-09 Score=92.59 Aligned_cols=59 Identities=12% Similarity=0.084 Sum_probs=47.1
Q ss_pred CCCCCcceEEecccCCCCceeeEEEeEecCCCCCCccCCCceeec--CCCCCCCCceEEEEEeccCc
Q 008661 189 GVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSV--SSEKSPKVADNFEPINIEGQ 253 (558)
Q Consensus 189 ~lsDPyVKv~L~~~~~~~krlkKKKT~VkK~TlNPvwN~E~F~Fe--p~e~l~~v~leveV~D~dG~ 253 (558)
+.+||||++++... ...++||.++++++||+|| |.|.|. +.+.+....+.|+|||++..
T Consensus 45 g~~dpyv~v~~~~~-----~~~~~kT~v~~~t~nP~wn-e~f~f~~~~~~~~~~~~l~i~V~d~d~~ 105 (141)
T 2d8k_A 45 GTSDPFVKIYLLPD-----KKHKLETKVKRKNLNPHWN-ETFLFEGFPYEKVVQRILYLQVLDYDRF 105 (141)
T ss_dssp SCCCEEEEEEEESC-----CSSEEECCCCTTCSSCCCC-EEEEECSCCHHHHTTSEEEEEEEECCSS
T ss_pred CCCCcEEEEEEECC-----CCccEeCceEcCCCCCccc-cEEEECccCHHHcccCEEEEEEEECCCC
Confidence 34899999999532 1246899999999999999 999997 33455678899999999843
No 68
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.63 E-value=1.3e-08 Score=91.71 Aligned_cols=57 Identities=7% Similarity=0.087 Sum_probs=46.5
Q ss_pred CCCCcceEEecccCCCCceeeEEEeEecCCCCCCccCCCceeec-CCCCCCCCceEEEEEeccC
Q 008661 190 VDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSV-SSEKSPKVADNFEPINIEG 252 (558)
Q Consensus 190 lsDPyVKv~L~~~~~~~krlkKKKT~VkK~TlNPvwN~E~F~Fe-p~e~l~~v~leveV~D~dG 252 (558)
.+||||++++... .+ +++||.++++++||+|| |.|.|. +..++....+.|+|||++.
T Consensus 53 ~~dpyv~v~l~~~---~~--~~~kT~v~~~t~nP~wn-e~f~f~v~~~~l~~~~L~~~V~d~d~ 110 (147)
T 2enp_A 53 HSNPYVKICLLPD---QK--NSKQTGVKRKTQKPVFE-ERYTFEIPFLEAQRRTLLLTVVDFDK 110 (147)
T ss_dssp CCCCEEEEEEETC---CS--SCEECCCCCSCSSCCCC-BCCEECCCHHHHHHSEEEEEEECCST
T ss_pred CCCcEEEEEEEeC---CC--cceEeecccCCCCCeEe-eeEEEEeChHHhccCEEEEEEEECCC
Confidence 5899999999542 11 46899999999999999 999998 4445556789999999984
No 69
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=98.53 E-value=8.4e-08 Score=84.80 Aligned_cols=61 Identities=16% Similarity=0.108 Sum_probs=47.1
Q ss_pred CCCCCcceEEecccCCCCceeeEEEeEecCCCCCCccCCCceeecCCCCCCCCceEEEEEeccCc
Q 008661 189 GVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVADNFEPINIEGQ 253 (558)
Q Consensus 189 ~lsDPyVKv~L~~~~~~~krlkKKKT~VkK~TlNPvwN~E~F~Fep~e~l~~v~leveV~D~dG~ 253 (558)
+.+||||++++... +....++||.++++++||+|| |.|.|..........+.++|||++..
T Consensus 35 ~~~dpyv~v~~~~~---~~~~~~~kT~~~~~t~nP~wn-e~f~f~~~~~~~~~~l~i~v~d~d~~ 95 (137)
T 3rdl_A 35 GLSDPYVKLKLIPD---PKNESKQKTKTIRSTLNPQWN-ESFTFKLKPSDKDRRLSVEIWDWDRT 95 (137)
T ss_dssp SCCCEEEEEEEECC---TTCCCCEECCCCCSCSSCEEE-EEEEEECCGGGGGCEEEEEEEECCSS
T ss_pred CCCCeeEEEEEEcC---CCCCeeecCceEcCCCCCCcc-cEEEEEcCchhcCCEEEEEEEECCCC
Confidence 45899999999433 345567899999999999999 99999833222245799999998843
No 70
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=98.46 E-value=1.1e-07 Score=85.94 Aligned_cols=61 Identities=15% Similarity=0.085 Sum_probs=47.7
Q ss_pred CCCCCcceEEecccCCCCceeeEEEeEecCCCCCCccCCCceeecCCCCCCCCceEEEEEeccCc
Q 008661 189 GVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVADNFEPINIEGQ 253 (558)
Q Consensus 189 ~lsDPyVKv~L~~~~~~~krlkKKKT~VkK~TlNPvwN~E~F~Fep~e~l~~v~leveV~D~dG~ 253 (558)
+.+||||++++... .....++||.++++|+||+|| |.|.|..........+.|+|||++..
T Consensus 50 g~~dpyv~v~~~~~---~~~~~~~kT~v~~~t~nP~wn-e~f~f~v~~~~~~~~L~i~V~d~d~~ 110 (149)
T 1a25_A 50 GLSDPYVKLKLIPD---PKSESKQKTKTIKCSLNPEWN-ETFRFQLKESDKDRRLSVEIWDWDLT 110 (149)
T ss_dssp SCCCEEEEEEEESC---TTCSSCEECCCCSSCSSCEEE-EEEEEECCSGGGGCEEEEEEEECCSS
T ss_pred CCcCeEEEEEEECC---CCCcceEecceeCCCCCCcCC-cEEEEEeccccCCCEEEEEEEECCCC
Confidence 45899999999542 344677899999999999999 99999933322345799999999843
No 71
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=98.43 E-value=4e-08 Score=87.72 Aligned_cols=64 Identities=11% Similarity=-0.038 Sum_probs=48.0
Q ss_pred CCCCCcceEEecccCCC------CceeeEEEeEecCCCCCCccCCCceeec--CCCCCCCCceEEEEEeccCc
Q 008661 189 GVDSPCDGGTLNKEGMG------NKEDQSNKEDIRESFANETTDKGSFSSV--SSEKSPKVADNFEPINIEGQ 253 (558)
Q Consensus 189 ~lsDPyVKv~L~~~~~~------~krlkKKKT~VkK~TlNPvwN~E~F~Fe--p~e~l~~v~leveV~D~dG~ 253 (558)
+.+||||++++...... +....++||.++++|+||+|| |.|.|. +.+++....+.++|||++..
T Consensus 37 g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wn-e~f~f~~v~~~~l~~~~l~i~V~d~d~~ 108 (142)
T 1rh8_A 37 GYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWN-QTVIYKSISMEQLMKKTLEVTVWDYDRF 108 (142)
T ss_dssp SCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEE-EEEEECSCCHHHHTTCEEEEEEEEECSS
T ss_pred CCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCC-CEEEECCcCHHHccCCEEEEEEEECCCC
Confidence 45899999999543100 011346789999999999999 999996 34455677999999999853
No 72
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=98.42 E-value=1.7e-07 Score=83.71 Aligned_cols=78 Identities=14% Similarity=0.118 Sum_probs=56.5
Q ss_pred ceEEEEEEEEEecc--CCCCCCCCcceEEecccCCCCceeeEEEeEecCCCCCCccCCCceeec--CCCCCCCCceEEEE
Q 008661 172 IGRLHLAITVLEES--AKQGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSV--SSEKSPKVADNFEP 247 (558)
Q Consensus 172 ~GeL~LsL~y~p~~--~~l~lsDPyVKv~L~~~~~~~krlkKKKT~VkK~TlNPvwN~E~F~Fe--p~e~l~~v~leveV 247 (558)
.|.|.+.+.-...- ...+.+||||++++.. .+....++||.++++|+||+|| |.|.|. +.+++....+.|+|
T Consensus 19 ~~~L~V~V~~a~~L~~~~~g~~DPyv~v~l~~---~~~~~~~~kT~v~~~t~nP~wn-E~f~f~~v~~~~l~~~~L~~~V 94 (134)
T 2b3r_A 19 NGTLFIMVMHIKDLVTEDGADPNPYVKTYLLP---DTHKTSKRKTKISRKTRNPTFN-EMLVYSGYSKETLRQRELQLSV 94 (134)
T ss_dssp TTEEEEEEEEEECCCCTTSCCCCEEEEEEEES---CSSSCCCEECCCCCSCSSCEEE-EEEEEESCCHHHHTTCEEEEEE
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCeEEEEEEEc---CCCCCceecCCcCcCCCCCCCc-cEEEECCcCHHHhCcCEEEEEE
Confidence 45666555432221 1234589999999953 3445677899999999999999 999997 33455678999999
Q ss_pred EeccCc
Q 008661 248 INIEGQ 253 (558)
Q Consensus 248 ~D~dG~ 253 (558)
||++..
T Consensus 95 ~d~d~~ 100 (134)
T 2b3r_A 95 LSAESL 100 (134)
T ss_dssp EECCSS
T ss_pred EECCCC
Confidence 999854
No 73
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=98.41 E-value=1.5e-07 Score=87.58 Aligned_cols=59 Identities=10% Similarity=-0.090 Sum_probs=47.9
Q ss_pred CCCCCcceEEecccCCCCceeeEEEeEecCCCCCCccCCCceeecCCCCCCCCceEEEEE-eccCc
Q 008661 189 GVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVADNFEPI-NIEGQ 253 (558)
Q Consensus 189 ~lsDPyVKv~L~~~~~~~krlkKKKT~VkK~TlNPvwN~E~F~Fep~e~l~~v~leveV~-D~dG~ 253 (558)
+.+||||++++.. .+++..++||.++++|+||+|| |.|.|... .....+.|+|| |++..
T Consensus 50 g~~DPyv~v~l~~---~~~~~~~~kT~v~~~t~nP~wn-e~f~f~v~--~~~~~L~~~V~~d~d~~ 109 (171)
T 2q3x_A 50 STPAPYVKVYLLE---NGACIAKKKTRIARKTLDPLYQ-QSLVFDES--PQGKVLQVIVWGDYGRM 109 (171)
T ss_dssp CCCEEEEEEEEEE---TTEEEEEEECCCCCSCSSCEEE-EEEECSSC--CTTEEEEEEEEEECSTT
T ss_pred CCCCceEEEEEEC---CCccccceeCccCCCCCCCCCC-cEEEEEec--CCCCEEEEEEEEcCCCC
Confidence 4589999999954 3556678999999999999999 99999832 23578999999 98843
No 74
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=98.29 E-value=1.1e-06 Score=76.63 Aligned_cols=75 Identities=7% Similarity=0.026 Sum_probs=53.5
Q ss_pred ceEEEEEEEEEeccCC------CCCCCCcceEEecccCCCCceeeEEEeEecCCCCCCccCCCceeecCCCCCCCCceEE
Q 008661 172 IGRLHLAITVLEESAK------QGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVADNF 245 (558)
Q Consensus 172 ~GeL~LsL~y~p~~~~------l~lsDPyVKv~L~~~~~~~krlkKKKT~VkK~TlNPvwN~E~F~Fep~e~l~~v~lev 245 (558)
.|.|.+.+.-...-.. .+.+||||++++... ...++||.++++++||+|| |.|.|... ......+.+
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~-----~~~~~kT~v~~~t~nP~wn-e~f~f~v~-~~~~~~l~i 74 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTT-----PDSRKRTRHFNNDINPVWN-ETFEFILD-PNQENVLEI 74 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTS-----TTCCEECCCCTTCSSCEEE-EEEEEEEC-TTSCCEEEE
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccC-----CCceEEccccCCCCCCccc-ceEEEEec-CCCCCEEEE
Confidence 3666666554333222 255899999999432 1367899999999999999 99999921 123568999
Q ss_pred EEEeccCc
Q 008661 246 EPINIEGQ 253 (558)
Q Consensus 246 eV~D~dG~ 253 (558)
+|||++..
T Consensus 75 ~V~d~d~~ 82 (126)
T 1rlw_A 75 TLMDANYV 82 (126)
T ss_dssp EEEECCSS
T ss_pred EEEECCCC
Confidence 99999843
No 75
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.20 E-value=3.1e-06 Score=75.23 Aligned_cols=73 Identities=11% Similarity=0.015 Sum_probs=54.0
Q ss_pred ceEEEEEEEEEeccCC--CCCCCCcceEEecccCCCCceeeEEEeEecCCCCCCccCCCceeec-CCCC-CCCCceEEEE
Q 008661 172 IGRLHLAITVLEESAK--QGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSV-SSEK-SPKVADNFEP 247 (558)
Q Consensus 172 ~GeL~LsL~y~p~~~~--l~lsDPyVKv~L~~~~~~~krlkKKKT~VkK~TlNPvwN~E~F~Fe-p~e~-l~~v~leveV 247 (558)
.|.|.+.+.--..-.. .+.+||||++++.. .++||.++++++||+|| |.|.|. .... .....+.|+|
T Consensus 6 ~g~L~v~v~~a~~L~~~~~g~~dpyv~v~~~~--------~~~kT~v~~~t~nP~wn-e~f~f~v~~~~~~~~~~l~i~V 76 (140)
T 2dmh_A 6 SGMLRVIVESASNIPKTKFGKPDPIVSVIFKD--------EKKKTKKVDNELNPVWN-EILEFDLRGIPLDFSSSLGIIV 76 (140)
T ss_dssp CCEEEEEEEEEESCCCCSSSCCCEEEEEECSS--------CEEECCCCCSCSSCEEE-EEEEEECSSCCCCTTCEEEEEE
T ss_pred CcEEEEEEEEeeCCCCCCCCCCCeEEEEEECC--------EeEEeeeecCCCCCccC-cEEEEEecccccCCCCEEEEEE
Confidence 5777776654332221 15689999999942 35899999999999999 999999 3322 3568899999
Q ss_pred EeccCc
Q 008661 248 INIEGQ 253 (558)
Q Consensus 248 ~D~dG~ 253 (558)
||++..
T Consensus 77 ~d~d~~ 82 (140)
T 2dmh_A 77 KDFETI 82 (140)
T ss_dssp EETTCS
T ss_pred EECCCC
Confidence 999843
No 76
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=98.18 E-value=2.7e-06 Score=75.15 Aligned_cols=55 Identities=7% Similarity=0.031 Sum_probs=43.6
Q ss_pred CCCCCCcceEEecccCCCCceeeEEEeEecCCCCCCccCCCceeec-CCCCCCCCceEEEEEeccCc
Q 008661 188 QGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSV-SSEKSPKVADNFEPINIEGQ 253 (558)
Q Consensus 188 l~lsDPyVKv~L~~~~~~~krlkKKKT~VkK~TlNPvwN~E~F~Fe-p~e~l~~v~leveV~D~dG~ 253 (558)
.+.+|||+++++... .+++||.++++|+||+|| |.|.|. ...+ .+.++|||++..
T Consensus 23 ~g~sDpyv~v~~~~~------~~~~kT~v~~~t~nP~wn-e~f~f~v~~~~----~l~~~v~d~d~~ 78 (132)
T 3pyc_A 23 FRLPDPFAKIVVDGS------GQCHSTDTVKNTLDPKWN-QHYDLYVGKTD----SITISVWNHKKI 78 (132)
T ss_dssp TCCCCEEEEEEETTT------CCEEECCCCSSCSSCEEE-EEEEEEEETTC----CEEEEEEEGGGT
T ss_pred CCCcCeEEEEEECCC------CceEECCccCCCCCCCcc-CEEEEEeCCCC----EEEEEEEECCCC
Confidence 345899999999432 257899999999999999 899998 2221 399999999854
No 77
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=98.15 E-value=5.4e-06 Score=74.88 Aligned_cols=79 Identities=13% Similarity=-0.068 Sum_probs=54.6
Q ss_pred CCceEEEEEEEEEeccC---CCCCCCCcceEEecccCCCCceeeEEEeEecCCCCCCccCCCceeecCCCCCCCCceEEE
Q 008661 170 IKIGRLHLAITVLEESA---KQGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVADNFE 246 (558)
Q Consensus 170 k~~GeL~LsL~y~p~~~---~l~lsDPyVKv~L~~~~~~~krlkKKKT~VkK~TlNPvwN~E~F~Fep~e~l~~v~leve 246 (558)
...|.|++.+.--..-. ..+.+||||++++... ..+...++||.++++|+||+|| |.|.|.... ....+.++
T Consensus 17 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~--~~~~~~~~kT~v~~~t~nP~wn-e~f~f~v~~--~~~~l~~~ 91 (153)
T 3b7y_A 17 ENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDP--MNGVLTSVQTKTIKKSLNPKWN-EEILFRVHP--QQHRLLFE 91 (153)
T ss_dssp TTCEEEEEEEEEEESCC-------CCEEEEEEEEET--TTEEEEEEECCCCSSCSSCCCC-EEEEEEECT--TTCEEEEE
T ss_pred CCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECC--CCccceeeeCccccCCCCCCCC-CEEEEEecC--CCCEEEEE
Confidence 35677766655333222 2345899999999532 2234678899999999999999 999999322 24678999
Q ss_pred EEeccCc
Q 008661 247 PINIEGQ 253 (558)
Q Consensus 247 V~D~dG~ 253 (558)
|||++..
T Consensus 92 V~d~d~~ 98 (153)
T 3b7y_A 92 VFDENRL 98 (153)
T ss_dssp EEECCSS
T ss_pred EEECCCC
Confidence 9999843
No 78
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=98.13 E-value=2e-06 Score=80.15 Aligned_cols=53 Identities=6% Similarity=0.045 Sum_probs=42.4
Q ss_pred CCCCCcceEEecccCCCCceeeEEEeEecCCCCCCccCCCceeecCCCCCCCCceEEEEEeccC
Q 008661 189 GVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVADNFEPINIEG 252 (558)
Q Consensus 189 ~lsDPyVKv~L~~~~~~~krlkKKKT~VkK~TlNPvwN~E~F~Fep~e~l~~v~leveV~D~dG 252 (558)
+.+||||++.++.. +..||.++++|+||+|| |.|.|...+ ...++++|||++.
T Consensus 58 g~sDPYv~v~l~~~-------~~~kT~v~~ktlnP~WN-E~F~f~v~~---~~~L~~~V~D~d~ 110 (157)
T 2fk9_A 58 QLLDPYLTVSVDQV-------RVGQTSTKQKTNKPTYN-EEFCANVTD---GGHLELAVFHETP 110 (157)
T ss_dssp CCCCEEEEEEETTE-------EEEECCCCSSCSSCEEE-EEEEEEEEE---ECEEEEEEEECCS
T ss_pred CCCCeEEEEEECCE-------eeEEeeecCCCCCCccC-cEEEEEcCC---CCEEEEEEEECCC
Confidence 45899999999322 34689999999999999 999998322 3578999999874
No 79
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=98.13 E-value=1.7e-06 Score=77.12 Aligned_cols=52 Identities=4% Similarity=-0.002 Sum_probs=42.0
Q ss_pred CCCCcceEEecccCCCCceeeEEEeEecCCCCCCccCCCceeecCCCCCCCCceEEEEEeccC
Q 008661 190 VDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVADNFEPINIEG 252 (558)
Q Consensus 190 lsDPyVKv~L~~~~~~~krlkKKKT~VkK~TlNPvwN~E~F~Fep~e~l~~v~leveV~D~dG 252 (558)
.+||||+++++. .+..||.++++|+||+|| |.|.|...+. ..+.++|||++.
T Consensus 37 ~~DPyv~v~l~~-------~~~~~T~~~~~t~nP~Wn-E~f~f~v~~~---~~L~~~V~d~d~ 88 (136)
T 1gmi_A 37 LLDPYIALNVDD-------SRIGQTATKQKTNSPAWH-DEFVTDVCNG---RKIELAVFHDAP 88 (136)
T ss_dssp CCCEEEEEEETT-------EEEEECCCCSSCSSCEEE-EEEEEEEEEE---CEEEEEEEECCS
T ss_pred CcCcEEEEEECC-------eEeeeeeEECCCcCCccC-CEEEEEecCC---CEEEEEEEeCCC
Confidence 389999999932 244689999999999999 9999993222 679999999984
No 80
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=98.08 E-value=7.3e-06 Score=76.19 Aligned_cols=78 Identities=12% Similarity=-0.069 Sum_probs=55.9
Q ss_pred CceEEEEEEEEEeccC---CCCCCCCcceEEecccCCCCceeeEEEeEecCCCCCCccCCCceeecCCCCCCCCceEEEE
Q 008661 171 KIGRLHLAITVLEESA---KQGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVADNFEP 247 (558)
Q Consensus 171 ~~GeL~LsL~y~p~~~---~l~lsDPyVKv~L~~~~~~~krlkKKKT~VkK~TlNPvwN~E~F~Fep~e~l~~v~leveV 247 (558)
..|.|.|.|.-...-. ..+.+||||++++... ..++.+++||.++++++||+|| |.|.|.... ....+.|+|
T Consensus 6 ~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~--~~~~~~~~kT~v~~~t~nP~Wn-e~f~f~v~~--~~~~L~~~V 80 (176)
T 3m7f_B 6 DTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDP--MSGILTSVQTKTIKKSLNPKWN-EEILFRVLP--QRHRILFEV 80 (176)
T ss_dssp TCEEEEEEEEEEESCC---CCCCCCEEEEEEEEET--TTEEEEEEECCCCSSCSSCEEE-EEEEEEECT--TTCEEEEEE
T ss_pred CcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECC--CCCcccceeCceECCCCCCccc-ceEEEEEcC--CCCEEEEEE
Confidence 4677777665433322 2456899999999542 3445578899999999999999 999998222 235789999
Q ss_pred EeccCc
Q 008661 248 INIEGQ 253 (558)
Q Consensus 248 ~D~dG~ 253 (558)
||++..
T Consensus 81 ~d~d~~ 86 (176)
T 3m7f_B 81 FDENRL 86 (176)
T ss_dssp EECC--
T ss_pred EECCCC
Confidence 998743
No 81
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=98.08 E-value=8.7e-06 Score=71.91 Aligned_cols=72 Identities=11% Similarity=0.054 Sum_probs=53.4
Q ss_pred CceEEEEEEEEEeccC---CCCCCCCcceEEecccCCCCceeeEEEeEecCCCCCCccCCCceeecCCCCCCCCceEEEE
Q 008661 171 KIGRLHLAITVLEESA---KQGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVADNFEP 247 (558)
Q Consensus 171 ~~GeL~LsL~y~p~~~---~l~lsDPyVKv~L~~~~~~~krlkKKKT~VkK~TlNPvwN~E~F~Fep~e~l~~v~leveV 247 (558)
..|.|++.+.--..-. ..+.+|||+++++.. .++||.++++++||+|| |.|.|...+ ....+.++|
T Consensus 11 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~--------~~~kT~~~~~t~nP~wn-e~f~f~~~~--~~~~l~i~V 79 (133)
T 2ep6_A 11 DVGILQVKVLKAADLLAADFSGKSDPFCLLELGN--------DRLQTHTVYKNLNPEWN-KVFTFPIKD--IHDVLEVTV 79 (133)
T ss_dssp CSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETT--------EEEECCCCSSCSSCCCC-EEEEEEESC--TTCEEEEEE
T ss_pred CceEEEEEEEeeECCCCCCCCCCcCeEEEEEECC--------EEEEeeeecCCCCCccc-cEEEEEecC--CCCEEEEEE
Confidence 4678877765433322 245689999999932 25799999999999999 999999322 236799999
Q ss_pred EeccCc
Q 008661 248 INIEGQ 253 (558)
Q Consensus 248 ~D~dG~ 253 (558)
||++..
T Consensus 80 ~d~d~~ 85 (133)
T 2ep6_A 80 FDEDGD 85 (133)
T ss_dssp EEEETT
T ss_pred EECCCC
Confidence 999854
No 82
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=98.04 E-value=8e-06 Score=73.12 Aligned_cols=67 Identities=9% Similarity=-0.063 Sum_probs=45.5
Q ss_pred ceEEEEEEEEEeccCCCCCCCCcceEEecccCCCCceeeEEEeEec-CCCCCCccCCCceeecCCCCCCCCceEEEEEec
Q 008661 172 IGRLHLAITVLEESAKQGVDSPCDGGTLNKEGMGNKEDQSNKEDIR-ESFANETTDKGSFSSVSSEKSPKVADNFEPINI 250 (558)
Q Consensus 172 ~GeL~LsL~y~p~~~~l~lsDPyVKv~L~~~~~~~krlkKKKT~Vk-K~TlNPvwN~E~F~Fep~e~l~~v~leveV~D~ 250 (558)
.|.|++.+.-.......+.+||||++.. + +.||.++ ++++||+|| |.|.|.... ....+.++|||+
T Consensus 4 ~~~L~V~V~~A~~l~~~g~~DPYv~v~~-~---------~~kt~~~~~~t~nP~Wn-E~f~f~v~~--~~~~L~~~V~D~ 70 (131)
T 2cjt_A 4 MSLLCVGVKKAKFDGAQEKFNTYVTLKV-Q---------NVKSTTIAVRGSQPSWE-QDFMFEINR--LDLGLTVEVWNK 70 (131)
T ss_dssp CEEEEEEEEEEECSSCGGGCEEEEEEEE-T---------TEEEECCCEESSSCEEE-EEEEEEECC--CSSEEEEEEEEC
T ss_pred ceEEEEEEEEeECCCCCCCcCeEEEEEe-c---------CEEEeEecCCCCCceEC-CEEEEEEeC--CCCeEEEEEEEC
Confidence 4666666554333223456899999982 2 1345444 479999999 999999322 234699999999
Q ss_pred c
Q 008661 251 E 251 (558)
Q Consensus 251 d 251 (558)
+
T Consensus 71 d 71 (131)
T 2cjt_A 71 G 71 (131)
T ss_dssp C
T ss_pred C
Confidence 8
No 83
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=98.00 E-value=9.8e-06 Score=76.07 Aligned_cols=70 Identities=13% Similarity=0.080 Sum_probs=50.5
Q ss_pred ceEEEEEEEEEeccC---CCCCCCCcceEEecccCCCCceeeEEEeEecCCCCCCccCCCceeecCCCCCCCCceEEEEE
Q 008661 172 IGRLHLAITVLEESA---KQGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVADNFEPI 248 (558)
Q Consensus 172 ~GeL~LsL~y~p~~~---~l~lsDPyVKv~L~~~~~~~krlkKKKT~VkK~TlNPvwN~E~F~Fep~e~l~~v~leveV~ 248 (558)
.|.|.+.|.--..-. ..+-+||||++++. + +++||.++++|+||+|| |.|.|.. . ....+.|+||
T Consensus 35 ~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~-----~---~~~kT~v~~~tlnP~Wn-e~f~f~v-~--~~~~L~~~V~ 102 (173)
T 2nq3_A 35 KSQLQITVISAKLKENKKNWFGPSPYVEVTVD-----G---QSKKTEKCNNTNSPKWK-QPLTVIV-T--PVSKLHFRVW 102 (173)
T ss_dssp CEEEEEEEEEEEECCCC--CCCCCEEEEEEET-----T---EEEECCCCSSCSSCEEE-EEEEEEE-C--TTCEEEEEEE
T ss_pred ceEEEEEEEEeECCCCcccCCCCCeEEEEEEC-----C---EEeEccccCCCCCCeEC-CEEEEEe-C--CCCEEEEEEE
Confidence 466666554322211 12238999999993 2 67899999999999999 9999983 2 2678999999
Q ss_pred eccCc
Q 008661 249 NIEGQ 253 (558)
Q Consensus 249 D~dG~ 253 (558)
|++..
T Consensus 103 D~d~~ 107 (173)
T 2nq3_A 103 SHQTL 107 (173)
T ss_dssp ECCSS
T ss_pred ECCCC
Confidence 99843
No 84
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=97.97 E-value=1e-05 Score=71.39 Aligned_cols=71 Identities=14% Similarity=0.054 Sum_probs=52.0
Q ss_pred CceEEEEEEEEEec---cCCCCCCCCcceEEecccCCCCceeeEEEeEecC-CCCCCccCCCceeecCCCCCCCCceEEE
Q 008661 171 KIGRLHLAITVLEE---SAKQGVDSPCDGGTLNKEGMGNKEDQSNKEDIRE-SFANETTDKGSFSSVSSEKSPKVADNFE 246 (558)
Q Consensus 171 ~~GeL~LsL~y~p~---~~~l~lsDPyVKv~L~~~~~~~krlkKKKT~VkK-~TlNPvwN~E~F~Fep~e~l~~v~leve 246 (558)
..|.|.+.+.--.. ....+.+|||+++++.. .++||.+++ +++||+|| |.|.|...+ ....+.|+
T Consensus 8 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~--------~~~kT~~~~~~~~nP~Wn-e~f~f~v~~--~~~~l~~~ 76 (136)
T 1wfj_A 8 PHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRT--------QDQKSNVAEGMGTTPEWN-ETFIFTVSE--GTTELKAK 76 (136)
T ss_dssp CEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSS--------CEEECCCCTTCCSSCEEE-EEEEEEEES--SCCEEEEE
T ss_pred CcEEEEEEEEeccCCCCcccCCCcCceEEEEECC--------ccceeEeccCCCCCCccC-cEEEEEECC--CCCEEEEE
Confidence 35777766643322 22245689999999933 246899998 89999999 999999332 56689999
Q ss_pred EEeccC
Q 008661 247 PINIEG 252 (558)
Q Consensus 247 V~D~dG 252 (558)
|||++.
T Consensus 77 V~d~~~ 82 (136)
T 1wfj_A 77 IFDKDV 82 (136)
T ss_dssp ECCSSS
T ss_pred EEECCC
Confidence 999984
No 85
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=97.94 E-value=1.7e-05 Score=71.22 Aligned_cols=70 Identities=9% Similarity=0.099 Sum_probs=51.9
Q ss_pred ceEEEEEEEEEecc---CCCCCCCCcceEEecccCCCCceeeEEEeEecCCCCCCccCCCceeecCCCCCCCCceEEEEE
Q 008661 172 IGRLHLAITVLEES---AKQGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVADNFEPI 248 (558)
Q Consensus 172 ~GeL~LsL~y~p~~---~~l~lsDPyVKv~L~~~~~~~krlkKKKT~VkK~TlNPvwN~E~F~Fep~e~l~~v~leveV~ 248 (558)
.|.|.+.+.-...- ...+.+|||+++++.. .++||.++++|+||+|| |.|.|..... ...+.++||
T Consensus 16 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~--------~~~kT~~~~~t~nP~Wn-e~f~f~v~~~--~~~l~~~v~ 84 (148)
T 3kwu_A 16 SAKISITVVCAQGLQAKDKTGSSDPYVTVQVGK--------TKKRTKTIYGNLNPVWE-ENFHFECHNS--SDRIKVRVL 84 (148)
T ss_dssp CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETT--------EEEECCCCCSCSSCEEE-EEEEEEECST--TCEEEEEEE
T ss_pred ccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECC--------EEEECCccCCCCCCCcc-cEEEEEecCC--CCEEEEEEE
Confidence 57777766543332 2245689999999921 46799999999999999 8999982221 257999999
Q ss_pred eccC
Q 008661 249 NIEG 252 (558)
Q Consensus 249 D~dG 252 (558)
|++.
T Consensus 85 d~d~ 88 (148)
T 3kwu_A 85 DEDD 88 (148)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 9985
No 86
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=97.80 E-value=4.2e-05 Score=84.19 Aligned_cols=91 Identities=9% Similarity=-0.099 Sum_probs=57.8
Q ss_pred eEEEEEEEEEecc--CCCCCCCCcceEEecccCCCCceeeEEEeEecCCCCCCccCCCceeecCCCCCCCCceEEEEEec
Q 008661 173 GRLHLAITVLEES--AKQGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVADNFEPINI 250 (558)
Q Consensus 173 GeL~LsL~y~p~~--~~l~lsDPyVKv~L~~~~~~~krlkKKKT~VkK~TlNPvwN~E~F~Fep~e~l~~v~leveV~D~ 250 (558)
|.|.+.+.--..- ...+.+||||++++. + +++||.++++++||+|| |.|.|..........|.|+|||+
T Consensus 394 ~~L~V~V~~A~~L~~D~~g~sDPYV~v~l~-----~---~~~kTkvik~tlNP~Wn-e~f~f~~~~~~~~~~L~~~V~D~ 464 (540)
T 3nsj_A 394 AHLVVSNFRAEHLWGDYTTATDAYLKVFFG-----G---QEFRTGVVWNNNNPRWT-DKMDFENVLLSTGGPLRVQVWDA 464 (540)
T ss_dssp EEEEEEEEEEESCCCSSCSCCCEEEEEEET-----T---EEEECCCBCSCSSCBCC-CCEEEEEEETTTCCCEEEEEEEC
T ss_pred cEEEEEEEEccCCCcccCCCcCeEEEEEEC-----C---EeeeeeeecCCCCCCCC-eEEEEEEecCCCCCEEEEEEEEC
Confidence 4555544432221 124458999999992 2 24899999999999999 89998721112456789999999
Q ss_pred cCcc--cc-ceEEecCCccccccCc
Q 008661 251 EGQQ--ET-GIWVHQPGSEVAQTWE 272 (558)
Q Consensus 251 dG~~--e~-Gv~v~~pgt~~~~hW~ 272 (558)
|... +- |........+..++|-
T Consensus 465 D~~~~dD~LG~~~~~L~~g~~~~~~ 489 (540)
T 3nsj_A 465 DYGWDDDLLGSCDRSPHSGFHEVTC 489 (540)
T ss_dssp CSSSCCEEEEEEEECCCSEEEEEEE
T ss_pred CCCCCCCEEEEEEEEeeCCcEEEEE
Confidence 9543 32 6553333333334453
No 87
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=97.73 E-value=3.9e-05 Score=71.77 Aligned_cols=67 Identities=7% Similarity=-0.062 Sum_probs=45.5
Q ss_pred ceEEEEEEEEEeccCCCCCCCCcceEEecccCCCCceeeEEEeEecC-CCCCCccCCCceeecCCCCCCCCceEEEEEec
Q 008661 172 IGRLHLAITVLEESAKQGVDSPCDGGTLNKEGMGNKEDQSNKEDIRE-SFANETTDKGSFSSVSSEKSPKVADNFEPINI 250 (558)
Q Consensus 172 ~GeL~LsL~y~p~~~~l~lsDPyVKv~L~~~~~~~krlkKKKT~VkK-~TlNPvwN~E~F~Fep~e~l~~v~leveV~D~ 250 (558)
.|.|++.+.-.......+.+||||++.. +. .||.+++ +++||+|| |.|.|.... ....+.|+|||+
T Consensus 13 ~~~L~V~V~~A~~l~~~g~~DPYV~v~~-~~---------~kt~~~~~~t~nP~Wn-E~f~f~v~~--~~~~L~~~V~D~ 79 (167)
T 2cjs_A 13 LSLLCVGVKKAKFDGAQEKFNTYVTLKV-QN---------VESTTIAVRGSQPSWE-QDFMFEINR--LDLGLTVEVWNK 79 (167)
T ss_dssp CCEEEEEEEEEECSSCGGGCEEEEEEEE-TT---------EEEECCCEESSSCEEE-EEEEEECCC--TTSEEEEEEEEC
T ss_pred eEEEEEEEEEEECCCCCCCCCeEEEEEe-cc---------eEEEEecCCCCCCCCC-CEEEEEeeC--CCCEEEEEEEEC
Confidence 4566665544332223455899999982 22 4555554 69999999 999999332 234699999999
Q ss_pred c
Q 008661 251 E 251 (558)
Q Consensus 251 d 251 (558)
+
T Consensus 80 d 80 (167)
T 2cjs_A 80 G 80 (167)
T ss_dssp C
T ss_pred C
Confidence 8
No 88
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=97.46 E-value=0.00012 Score=67.57 Aligned_cols=74 Identities=16% Similarity=0.082 Sum_probs=55.6
Q ss_pred EEEEEEeccCCCCCCCCcceEEecccCCCCceeeEEEeEecC-CCCCCccCCCceeec-CCCCCCCCceEEEEEecc--C
Q 008661 177 LAITVLEESAKQGVDSPCDGGTLNKEGMGNKEDQSNKEDIRE-SFANETTDKGSFSSV-SSEKSPKVADNFEPINIE--G 252 (558)
Q Consensus 177 LsL~y~p~~~~l~lsDPyVKv~L~~~~~~~krlkKKKT~VkK-~TlNPvwN~E~F~Fe-p~e~l~~v~leveV~D~d--G 252 (558)
|.+++....+.-+.+|||+++.+ |-.|+||.+++ +.+||+|| |.|.|. ....+..-.|++.|+|++ |
T Consensus 23 L~V~l~~a~~Lpg~~Dp~akv~F--------Rg~k~kTkvi~~~~~npvfn-E~F~wpl~~~ld~~e~L~v~V~d~~~v~ 93 (144)
T 3l9b_A 23 LIVHLKTVSELRGRADRIAKVTF--------RGQSFYSRVLENCEDVADFD-ETFRWPVASSIDRNEVLEIQIFNYSKVF 93 (144)
T ss_dssp EEEEEEEEESCCSCEEEEEEEEE--------TTEEEECCCEEEECSCEEEE-EEEEEEESSCCCTTCEEEEEEEEECTTS
T ss_pred EEEEEEEecCCCCCCCCeEEEEE--------eccceeeEEeccCCCCceEc-ceEEecCCCCCCCCCEEEEEEEECcccc
Confidence 34433433333356899999999 33678999998 79999999 999999 556677789999999998 4
Q ss_pred cccc-ceE
Q 008661 253 QQET-GIW 259 (558)
Q Consensus 253 ~~e~-Gv~ 259 (558)
.+.. |-+
T Consensus 94 ~nrlIG~~ 101 (144)
T 3l9b_A 94 SNKLIGTF 101 (144)
T ss_dssp CCEEEEEE
T ss_pred CCCEEEEE
Confidence 4544 655
No 89
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=97.45 E-value=0.0001 Score=82.53 Aligned_cols=62 Identities=16% Similarity=0.099 Sum_probs=49.3
Q ss_pred CCCCCCcceEEecccCCCCceeeEEEeEecCCCCCCccCCCceeecCCCCCCCCceEEEEEeccCc
Q 008661 188 QGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVADNFEPINIEGQ 253 (558)
Q Consensus 188 l~lsDPyVKv~L~~~~~~~krlkKKKT~VkK~TlNPvwN~E~F~Fep~e~l~~v~leveV~D~dG~ 253 (558)
.+.+||||++++.+. .+...++||.++++|+||+|| |.|.|..........+.++|||+|..
T Consensus 190 ~g~sDPyvkv~l~p~---~~~~~k~kT~v~~~tlnP~wn-e~f~f~~~~~~~~~~L~v~v~d~d~~ 251 (674)
T 3pfq_A 190 NGLSDPYVKLKLIPD---PKSESKQKTKTIKSSLNPEWN-ETFRFQLKESDKDRRLSVEIWDWDLT 251 (674)
T ss_dssp TSSCCEEEEEEEESC---SSCCSCEECCCCSSCSSCEEE-EEEEEECCSTTTTCEEEEEEEECCSS
T ss_pred ccccCcccccccccC---ccccccccccccccccCCCcc-ceeeeecccCCccceeeeEEeecccc
Confidence 345899999999544 445667899999999999999 99999944444555799999999844
No 90
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=97.36 E-value=0.00018 Score=82.05 Aligned_cols=77 Identities=6% Similarity=0.009 Sum_probs=55.1
Q ss_pred CCceEEEEEEEEEeccCC------CCCCCCcceEEecccCCCCceeeEEEeEecCCCCCCccCCCceeecCCCCCCCCce
Q 008661 170 IKIGRLHLAITVLEESAK------QGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVAD 243 (558)
Q Consensus 170 k~~GeL~LsL~y~p~~~~------l~lsDPyVKv~L~~~~~~~krlkKKKT~VkK~TlNPvwN~E~F~Fep~e~l~~v~l 243 (558)
...|.|.+.|.--..-.. .+.+||||++++... ...++||.++++++||+|| |.|.|.... .....+
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~-----~~~k~kTkvik~tlNPvWN-EtF~F~v~~-~~~~~L 87 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTT-----PDSRKRTRHFNNDINPVWN-ETFEFILDP-NQENVL 87 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTS-----TTCCEECCCCTTCSSCEEE-EEEEEEECT-TSCCBC
T ss_pred CCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecC-----CCCeEecceEcCCCCCeee-eEEEEEecC-CCCCEE
Confidence 346777776653332222 345899999999432 2267899999999999999 999999222 245589
Q ss_pred EEEEEeccCc
Q 008661 244 NFEPINIEGQ 253 (558)
Q Consensus 244 eveV~D~dG~ 253 (558)
.|+|||+|..
T Consensus 88 ~~~V~D~D~~ 97 (749)
T 1cjy_A 88 EITLMDANYV 97 (749)
T ss_dssp EEEEEECCSS
T ss_pred EEEEEECCCC
Confidence 9999999843
No 91
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=97.30 E-value=0.0003 Score=75.23 Aligned_cols=72 Identities=14% Similarity=0.048 Sum_probs=51.4
Q ss_pred ceEEEEEEEEEecc---CCCCCCCCcceEEecccCCCCceeeEEEeEecCCCCCCccCCCceeecCCCCCCCCceEEEEE
Q 008661 172 IGRLHLAITVLEES---AKQGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVADNFEPI 248 (558)
Q Consensus 172 ~GeL~LsL~y~p~~---~~l~lsDPyVKv~L~~~~~~~krlkKKKT~VkK~TlNPvwN~E~F~Fep~e~l~~v~leveV~ 248 (558)
.|.|.+.+.-...- ...+.+||||++++.. .++||.++++|+||+|| |.|.|.. .......+.|+||
T Consensus 386 ~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~--------~~~~T~~~~~t~nP~w~-e~f~f~~-~~~~~~~l~~~v~ 455 (510)
T 3jzy_A 386 IGRLMVHVIEATELKACKPNGKSNPYCEISMGS--------QSYTTRTIQDTLNPKWN-FNCQFFI-KDLYQDVLCLTLF 455 (510)
T ss_dssp CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETT--------EEEECCCCSSCSSCEEE-EEEEEEE-SCTTTCEEEEEEE
T ss_pred CceEEEEeceeecCCCCCCCCCCCeEEEEEECC--------eeccCCccCCCCCCccC-ceEEEEe-cCCCCCEEEEEEE
Confidence 35655554433222 2245689999999922 46899999999999999 8999982 2334467999999
Q ss_pred eccCc
Q 008661 249 NIEGQ 253 (558)
Q Consensus 249 D~dG~ 253 (558)
|+|..
T Consensus 456 d~d~~ 460 (510)
T 3jzy_A 456 DRDQF 460 (510)
T ss_dssp ECCSS
T ss_pred eCCCC
Confidence 99853
No 92
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=97.18 E-value=0.00043 Score=77.36 Aligned_cols=60 Identities=10% Similarity=0.029 Sum_probs=45.6
Q ss_pred CCCCCCcceEEecccCCCCceeeEEEeEecCCC-CCCccCCCceeec-CCCCCCCCceEEEEEeccCc
Q 008661 188 QGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESF-ANETTDKGSFSSV-SSEKSPKVADNFEPINIEGQ 253 (558)
Q Consensus 188 l~lsDPyVKv~L~~~~~~~krlkKKKT~VkK~T-lNPvwN~E~F~Fe-p~e~l~~v~leveV~D~dG~ 253 (558)
.+.+||||++.+... .....++||.+++++ +||+|| |.|.|. ...+ ...+.|+|||+|..
T Consensus 517 ~~~~DPYV~V~l~g~---~~d~~~~kTkvi~~ng~NP~Wn-E~f~F~v~~~e--l~~L~~~V~D~D~~ 578 (624)
T 1djx_A 517 NSIVDPKVIVEIHGV---GRDTGSRQTAVITNNGFNPRWD-MEFEFEVTVPD--LALVRFMVEDYDSS 578 (624)
T ss_dssp SSCCCEEEEEEEESS---GGGCEEEECCCCTTCSSSCEEE-EEEEEEESCGG--GCEEEEEEEECCSS
T ss_pred cCCCCcEEEEEEecC---CCCcceeecccccCCCCCCccC-ceEEEEEecCC--CCEEEEEEEEcCCC
Confidence 356899999999432 123456899999998 999999 999998 4333 35789999999843
No 93
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=96.57 E-value=0.0035 Score=72.02 Aligned_cols=75 Identities=5% Similarity=-0.108 Sum_probs=47.5
Q ss_pred ceEEEEEEEEEeccCCCCCCCCcceEEecccCCCCceeeEEEeE-ecC-CCCCCccCCCceee-c-CCCCCCCCceEEEE
Q 008661 172 IGRLHLAITVLEESAKQGVDSPCDGGTLNKEGMGNKEDQSNKED-IRE-SFANETTDKGSFSS-V-SSEKSPKVADNFEP 247 (558)
Q Consensus 172 ~GeL~LsL~y~p~~~~l~lsDPyVKv~L~~~~~~~krlkKKKT~-VkK-~TlNPvwN~E~F~F-e-p~e~l~~v~leveV 247 (558)
.|.|.|.|.--..-.. ..+||||++.|... .....+|+||. +++ +++||+||++.|.| . ...++ ..+.|+|
T Consensus 677 ~~~L~V~Visa~~L~~-~~~DPYV~V~l~g~--p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el--~~Lr~~V 751 (799)
T 2zkm_X 677 ATTLSITVISGQFLSE-RSVRTYVEVELFGL--PGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPEL--ASLRVAV 751 (799)
T ss_dssp CEEEEEEEEEEESCCS-SCCCEEEEEEEECC--TTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGG--CEEEEEE
T ss_pred eeeEEEEEEeccccCc-cCCCcEEEEEEEec--CCCcccceeecccccCCCCCCeeecceEEEEEEccCCc--cEEEEEE
Confidence 4666655543222111 24899999999432 11122357898 665 56999999337999 5 33443 3789999
Q ss_pred Eecc
Q 008661 248 INIE 251 (558)
Q Consensus 248 ~D~d 251 (558)
||++
T Consensus 752 ~D~d 755 (799)
T 2zkm_X 752 MEEG 755 (799)
T ss_dssp EETT
T ss_pred EEeC
Confidence 9986
No 94
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=96.46 E-value=0.00051 Score=74.31 Aligned_cols=49 Identities=6% Similarity=-0.166 Sum_probs=5.6
Q ss_pred CCCcceEEecccCCCCceeeEEEeEecCCC---CCCccCCCceeecCCCCCCCCceEEEEEe
Q 008661 191 DSPCDGGTLNKEGMGNKEDQSNKEDIRESF---ANETTDKGSFSSVSSEKSPKVADNFEPIN 249 (558)
Q Consensus 191 sDPyVKv~L~~~~~~~krlkKKKT~VkK~T---lNPvwN~E~F~Fep~e~l~~v~leveV~D 249 (558)
.|||++++++.. ++.||.++++| +||+|| |.|.|..... ...+.++|||
T Consensus 27 ddpYv~v~l~~~-------~~~kT~v~~kt~~glnP~Wn-E~F~f~~~~~--~~~L~v~V~d 78 (483)
T 3bxj_A 27 KRYYCELCLDDM-------LYARTTSKPRSASGDTVFWG-EHFEFNNLPA--VRALRLHLYR 78 (483)
T ss_dssp ----------------------------------------CCEECC----------------
T ss_pred CCCeEEEEECCe-------EEeeeeEEeCCCCCCCCccc-cEEEEecCCC--ccEEEEEEEe
Confidence 389999999322 34689999999 999999 9999982212 3678899999
No 95
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=96.13 E-value=0.0078 Score=69.29 Aligned_cols=58 Identities=10% Similarity=-0.132 Sum_probs=41.1
Q ss_pred CCCCcceEEecccCCCCceeeEEEeEecCC-CCCCccCCCc-eeec--CCCCCCCCceEEEEEecc
Q 008661 190 VDSPCDGGTLNKEGMGNKEDQSNKEDIRES-FANETTDKGS-FSSV--SSEKSPKVADNFEPINIE 251 (558)
Q Consensus 190 lsDPyVKv~L~~~~~~~krlkKKKT~VkK~-TlNPvwN~E~-F~Fe--p~e~l~~v~leveV~D~d 251 (558)
.+||||++.|.... .....+++||.++++ ++||+|| |. |.|. ...+ ...+.|+|||++
T Consensus 666 ~~DPYV~V~l~g~p-~d~~~~k~kTkvv~~nglNPvWN-E~~F~F~~v~~pe--la~Lrf~V~D~d 727 (816)
T 3qr0_A 666 QISSYVEVEMYGLP-TDTVRKKFKTKIIENNGMDPYYD-EKVFVFKKVVLPD--LAVVRIIVSEEN 727 (816)
T ss_dssp CCCEEEEEEEESSG-GGCEEEEEECCCBCSCSSCCBCC-CCCEEEEEESCGG--GCEEEEEEEETT
T ss_pred CCCCeEEEEEeCCC-cccccceeeeEEecCCCCCCeEc-CceeEEccccCCC--ccEEEEEEEecC
Confidence 38999999994320 112235779999876 5999999 65 9996 2233 357899999975
No 96
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=96.02 E-value=0.0056 Score=71.01 Aligned_cols=74 Identities=7% Similarity=-0.076 Sum_probs=46.2
Q ss_pred EEEEEEEeccCC-CCCCCCcceEEecccCCCCceeeEEEeEecCC-CCCCccCCCceeecCCCCCCCCceEEEEEecc
Q 008661 176 HLAITVLEESAK-QGVDSPCDGGTLNKEGMGNKEDQSNKEDIRES-FANETTDKGSFSSVSSEKSPKVADNFEPINIE 251 (558)
Q Consensus 176 ~LsL~y~p~~~~-l~lsDPyVKv~L~~~~~~~krlkKKKT~VkK~-TlNPvwN~E~F~Fep~e~l~~v~leveV~D~d 251 (558)
.|.|.+.....- ...+||||++.|... .....+|+||.++++ ++||+||++.|.|..........|.|+|||++
T Consensus 726 ~L~V~Visaq~L~~~~~DPYV~V~l~g~--p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~d 801 (885)
T 3ohm_B 726 ALRVKVISGQFLSDRKVGIYVEVDMFGL--PVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEEG 801 (885)
T ss_dssp EEEEEEEEEESCCSSCCCEEEEEEEESS--TTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEETT
T ss_pred EEEEEEEEeccCcccCCCcEEEEEEeCC--CcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcCC
Confidence 455555443321 123899999999432 111223468988876 59999993369997111222347999999986
No 97
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=88.36 E-value=2 Score=38.69 Aligned_cols=68 Identities=9% Similarity=0.030 Sum_probs=42.3
Q ss_pred eEEEEEEEEEeccC---CCCCCCCcceEEecccCCCCceeeEEEe-EecCCCCCCccCCCceeecCCCCCCCCceEEEEE
Q 008661 173 GRLHLAITVLEESA---KQGVDSPCDGGTLNKEGMGNKEDQSNKE-DIRESFANETTDKGSFSSVSSEKSPKVADNFEPI 248 (558)
Q Consensus 173 GeL~LsL~y~p~~~---~l~lsDPyVKv~L~~~~~~~krlkKKKT-~VkK~TlNPvwN~E~F~Fep~e~l~~v~leveV~ 248 (558)
+-|++.+.-..... ...+.|||+.+.++-... -.+-|| ..+++|..|+|| +.|.... ..-..+++.|+
T Consensus 6 ~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~----~e~g~t~~~K~kT~~P~Wn-e~Fd~~V---~~Gr~l~i~Vf 77 (126)
T 1yrk_A 6 PFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALS----TERGKTLVQKKPTMYPEWK-STFDAHI---YEGRVIQIVLM 77 (126)
T ss_dssp CEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEE----ETTEEEEECCSCCBCCCTT-CEEEEEC---CTTCEEEEEEE
T ss_pred ccEEeeeccccccccCCccccCCceEEEEeeeeEE----cccceeecccCCCCCcCcc-ceEEeee---eCCEEEEEEEE
Confidence 45666665444322 223589999999843310 011255 778899999999 8888663 33356667766
No 98
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=88.10 E-value=3.3 Score=40.58 Aligned_cols=56 Identities=13% Similarity=0.290 Sum_probs=41.5
Q ss_pred eEEEeeeecCCCCCccceEEEEeeccCC-CCceEEEEEeecCCC----C-CCccEEEEEecc
Q 008661 98 YRFRTKTQRKTLSPKWHEEFNIPISTWD-SPNVLVIEVRDKDHF----V-DDTLGDCTINIS 153 (558)
Q Consensus 98 ~k~KTkVikkTlNPvWnEtF~F~V~~~e-~~~tL~V~V~D~D~~----s-DDfIGev~IpL~ 153 (558)
..++|-|...+.+|.|+|++.+.++... ....|.|+++..... . ...+|.+.+||-
T Consensus 77 se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~ 138 (220)
T 3l4c_A 77 SEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLM 138 (220)
T ss_dssp SCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESB
T ss_pred eeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEcc
Confidence 4578889999999999999999998643 345899999876432 1 235677766664
No 99
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=85.95 E-value=2.5 Score=49.50 Aligned_cols=103 Identities=17% Similarity=0.183 Sum_probs=68.4
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEe--CCe----EEEeeeecCCCCCccceEEEEeec--cCCCCceEEEEEee
Q 008661 65 VAYARVEVVEASDMKPSDLNGLADPYVKGQL--GPY----RFRTKTQRKTLSPKWHEEFNIPIS--TWDSPNVLVIEVRD 136 (558)
Q Consensus 65 ~G~L~VtVieArdL~~~D~~G~sDPYVkV~L--gp~----k~KTkVikkTlNPvWnEtF~F~V~--~~e~~~tL~V~V~D 136 (558)
...|.|+|..+.++... ...+-||.+.+ |.. ...|..+.-..+|.|||.+.|.+. ..+....|.|+||+
T Consensus 216 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~ 292 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYA 292 (940)
T ss_dssp CSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEE
T ss_pred CCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEE
Confidence 36799999999999653 34678888776 442 334555555678999999888765 34456799999999
Q ss_pred cCCC-----------C--CCccEEEEEecccccCCCceeeeeecCCCCceEEEEEEEE
Q 008661 137 KDHF-----------V--DDTLGDCTINISDLRDGQRHDMWIPLQNIKIGRLHLAITV 181 (558)
Q Consensus 137 ~D~~-----------s--DDfIGev~IpL~eL~~~~~~e~W~~L~~k~~GeL~LsL~y 181 (558)
...- + +..||.+.++|-+... .| ..|...|.++-
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~~--------~l---~~G~~~l~lw~ 339 (940)
T 2wxf_A 293 VVEKAKKARSTKKKSKKADCPIAWANLMLFDYKD--------QL---KTGERCLYMWP 339 (940)
T ss_dssp EC----------------CEEEEEEEEESBCTTS--------BB---CCEEEEEECEE
T ss_pred ecCCccCccccccccccccceEEEEeeeEECCcC--------cc---ccCCEEEEEee
Confidence 6331 1 3478888888775432 11 25777777764
No 100
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=84.00 E-value=2.7 Score=38.40 Aligned_cols=68 Identities=6% Similarity=-0.039 Sum_probs=42.3
Q ss_pred eEEEEEEEEEeccCC----CCCCCCcceEEecccCCCCceeeEEEe-EecCCCCCCccCCCceeecCCCCCCCCceEEEE
Q 008661 173 GRLHLAITVLEESAK----QGVDSPCDGGTLNKEGMGNKEDQSNKE-DIRESFANETTDKGSFSSVSSEKSPKVADNFEP 247 (558)
Q Consensus 173 GeL~LsL~y~p~~~~----l~lsDPyVKv~L~~~~~~~krlkKKKT-~VkK~TlNPvwN~E~F~Fep~e~l~~v~leveV 247 (558)
+-|++.+.-...... -.+.|||+.+.++-... ..+-|| ..+++|..|+|| +.|... ...-..+++.|
T Consensus 10 ~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~----te~gqtl~~KkkT~~P~Wn-e~Fd~~---V~~Gr~l~i~V 81 (138)
T 2enj_A 10 PFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVE----SENGQMYIQKKPTMYPPWD-STFDAH---INKGRVMQIIV 81 (138)
T ss_dssp CCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEE----ETTEEEEEEEEEEECCCSS-SEEEEC---CCSSCEEEEEE
T ss_pred cceEEEeeccccCCCCCcccccCCceEEEEeeeeee----ccCceeecccCCCCCcccc-ceEeee---EECCeEEEEEE
Confidence 456666654443221 23589999999833211 112455 667788999999 888765 33445677777
Q ss_pred E
Q 008661 248 I 248 (558)
Q Consensus 248 ~ 248 (558)
+
T Consensus 82 f 82 (138)
T 2enj_A 82 K 82 (138)
T ss_dssp E
T ss_pred E
Confidence 7
No 101
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=81.95 E-value=5.7 Score=47.12 Aligned_cols=103 Identities=19% Similarity=0.275 Sum_probs=70.0
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEe--CC----eEEEeeeecCCCCCccceEEEEeec--cCCCCceEEEEEee
Q 008661 65 VAYARVEVVEASDMKPSDLNGLADPYVKGQL--GP----YRFRTKTQRKTLSPKWHEEFNIPIS--TWDSPNVLVIEVRD 136 (558)
Q Consensus 65 ~G~L~VtVieArdL~~~D~~G~sDPYVkV~L--gp----~k~KTkVikkTlNPvWnEtF~F~V~--~~e~~~tL~V~V~D 136 (558)
...++|+|+.+.++... .....+-||.+.+ |. ...+|+.+. ..+|.|||.+.|.+. ..+....|.|+||+
T Consensus 354 ~~~f~v~i~~~~~~n~~-~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~ 431 (1091)
T 3hhm_A 354 NSALRIKILCATYVNVN-IRDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSICS 431 (1091)
T ss_dssp CSEEEEEEEEESCCCCC-CSSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEECC
T ss_pred CCCEEEEEEEecCCCCC-ccccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEEEE
Confidence 35789999999988643 2334678888887 43 234444333 457889999888775 44456799999998
Q ss_pred cCCCC-----CCccEEEEEecccccCCCceeeeeecCCCCceEEEEEEE
Q 008661 137 KDHFV-----DDTLGDCTINISDLRDGQRHDMWIPLQNIKIGRLHLAIT 180 (558)
Q Consensus 137 ~D~~s-----DDfIGev~IpL~eL~~~~~~e~W~~L~~k~~GeL~LsL~ 180 (558)
....+ +..||.+.++|-+.... | ..|...|.++
T Consensus 432 ~~~~~~~~~~~~~lg~~n~~lfd~~~~--------L---~~G~~~L~lW 469 (1091)
T 3hhm_A 432 VKGRKGAKEEHCPLAWGNINLFDYTDT--------L---VSGKMALNLW 469 (1091)
T ss_dssp CCCCC-------CCEEEEEESBCTTCB--------B---CCEEEEEECE
T ss_pred ecCccCcccccceeEEeeeeeEccCCe--------E---EcCCeEEEee
Confidence 76531 35789999988765321 2 2588777776
No 102
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=71.00 E-value=4.1 Score=48.42 Aligned_cols=71 Identities=13% Similarity=0.146 Sum_probs=50.4
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEe--CCe----EEEeeeecCCCCCccceEEEEeec--cCCCCceEEEEEee
Q 008661 65 VAYARVEVVEASDMKPSDLNGLADPYVKGQL--GPY----RFRTKTQRKTLSPKWHEEFNIPIS--TWDSPNVLVIEVRD 136 (558)
Q Consensus 65 ~G~L~VtVieArdL~~~D~~G~sDPYVkV~L--gp~----k~KTkVikkTlNPvWnEtF~F~V~--~~e~~~tL~V~V~D 136 (558)
...++|+|..+.++... ...+-||.+.+ |.. ...|..+.-..+|.|||.+.|.+. ..+....|.|+||+
T Consensus 352 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~ 428 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYA 428 (1092)
T ss_dssp CSEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCC
T ss_pred CCCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEE
Confidence 36899999999999654 34677777655 542 234555555678999999888776 33456689999998
Q ss_pred cC
Q 008661 137 KD 138 (558)
Q Consensus 137 ~D 138 (558)
..
T Consensus 429 ~~ 430 (1092)
T 2y3a_A 429 VL 430 (1092)
T ss_dssp C-
T ss_pred ec
Confidence 63
No 103
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=67.14 E-value=18 Score=42.53 Aligned_cols=104 Identities=15% Similarity=0.081 Sum_probs=63.8
Q ss_pred eEEEEEEEEecCCCCCCCCCCCCcEEEEEe--CCe---EEEeeeecCCCCCccceEEEEeec--cCCCCceEEEEEeecC
Q 008661 66 AYARVEVVEASDMKPSDLNGLADPYVKGQL--GPY---RFRTKTQRKTLSPKWHEEFNIPIS--TWDSPNVLVIEVRDKD 138 (558)
Q Consensus 66 G~L~VtVieArdL~~~D~~G~sDPYVkV~L--gp~---k~KTkVikkTlNPvWnEtF~F~V~--~~e~~~tL~V~V~D~D 138 (558)
..++|.|+.+..+... .+...+-||.+.+ |.. ..+|..+.-+.+|.|||.+.|.+. ..+....|.|+||+..
T Consensus 218 ~~f~i~i~~~~~~~~~-~~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 296 (961)
T 1e7u_A 218 RKFRVKIRGIDIPVLP-RTADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGA 296 (961)
T ss_dssp SEEEEEEEEEECSSCC-TTSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEE
T ss_pred CceEEEEeeccccccc-CCCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecc
Confidence 4688888888642111 1234577887765 542 234444444567999999888765 4445679999999853
Q ss_pred CC-----------------CCCccEEEEEecccccCCCceeeeeecCCCCceEEEEEEEE
Q 008661 139 HF-----------------VDDTLGDCTINISDLRDGQRHDMWIPLQNIKIGRLHLAITV 181 (558)
Q Consensus 139 ~~-----------------sDDfIGev~IpL~eL~~~~~~e~W~~L~~k~~GeL~LsL~y 181 (558)
.. ....||.+.++|-+.... | ..|...|.++-
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~~~--------l---~~G~~~L~lw~ 345 (961)
T 1e7u_A 297 KPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHRFL--------L---RHGEYVLHMWQ 345 (961)
T ss_dssp C--------------------CEEEEEEEESBCTTSB--------B---CCEEEEEECEE
T ss_pred cCccccccccccccccccccceeEEEEeeeeecCCCc--------c---ccCCEEEEEee
Confidence 22 134678888887654321 1 25777776664
No 104
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=59.78 E-value=17 Score=33.74 Aligned_cols=121 Identities=12% Similarity=0.148 Sum_probs=76.2
Q ss_pred ecCCceEEEEEEEEecCCCCCC--CCCCCCc--EEEEEeCC-eEEEeeeecCCCCCccceEEEEeeccCC------CCce
Q 008661 61 VKEPVAYARVEVVEASDMKPSD--LNGLADP--YVKGQLGP-YRFRTKTQRKTLSPKWHEEFNIPISTWD------SPNV 129 (558)
Q Consensus 61 Yd~~~G~L~VtVieArdL~~~D--~~G~sDP--YVkV~Lgp-~k~KTkVikkTlNPvWnEtF~F~V~~~e------~~~t 129 (558)
.....+.+.|+|.++. |-+.. ..+..+| ||.+.+-. +.+.|.+++ .++|.||-+-.|.|.... ....
T Consensus 13 l~~gEnlfEihi~~~~-~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~ 90 (156)
T 2yrb_A 13 LERGENLFEIHINKVT-FSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNT 90 (156)
T ss_dssp CCSSCEEEEEEEEEEC-CCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCC
T ss_pred ccCCCcEEEEEEeEEE-EcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCC
Confidence 3445678889999886 22111 1123456 44444444 445555555 789999988888775321 1347
Q ss_pred EEEEEeecCCCCCCccEEEEEecccccCCCc-eeeeeecCC-----CCceEEEEEEEEEe
Q 008661 130 LVIEVRDKDHFVDDTLGDCTINISDLRDGQR-HDMWIPLQN-----IKIGRLHLAITVLE 183 (558)
Q Consensus 130 L~V~V~D~D~~sDDfIGev~IpL~eL~~~~~-~e~W~~L~~-----k~~GeL~LsL~y~p 183 (558)
|.|+++.........||.++|+|..+...+. ...-.+|.+ ..-|.|.+.+++..
T Consensus 91 l~lELhqa~g~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~~g~~~~~G~LeywiRL~~ 150 (156)
T 2yrb_A 91 ITLEVHQAYSTEYETIAACQLKFHEILEKSGRIFCTASLIGTKGDIPNFGTVEYWFRLRV 150 (156)
T ss_dssp EEEEEEEECSSCEEEEEEEEECCSHHHHCCSCEEEEEEECBSSSCCTTSEEEEEEEEEEE
T ss_pred EEEEEEEeeCCCceEEEEEEEEhHHhhCcCCceEEEEEEEcCCCCcceEEEEEEEEEEec
Confidence 8999988654336689999999999864433 333445543 24588877777654
Done!