Query 008662
Match_columns 558
No_of_seqs 528 out of 1747
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 08:47:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008662.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008662hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ntd_A FAD-dependent pyridine 99.9 2.1E-27 7E-32 256.3 7.2 221 110-397 320-565 (565)
2 3ics_A Coenzyme A-disulfide re 99.9 2.9E-27 9.8E-32 257.7 7.5 224 109-397 334-582 (588)
3 3iwh_A Rhodanese-like domain p 99.9 9.3E-24 3.2E-28 183.9 9.1 101 271-402 2-102 (103)
4 3foj_A Uncharacterized protein 99.9 3.2E-23 1.1E-27 177.3 9.0 99 271-400 2-100 (100)
5 3eme_A Rhodanese-like domain p 99.9 5.2E-23 1.8E-27 176.6 9.1 101 271-402 2-102 (103)
6 3gk5_A Uncharacterized rhodane 99.9 5.1E-22 1.7E-26 172.8 8.9 102 270-405 3-104 (108)
7 1gmx_A GLPE protein; transfera 99.8 1.2E-21 4E-26 169.5 8.8 102 271-404 5-106 (108)
8 3d1p_A Putative thiosulfate su 99.8 1.3E-21 4.5E-26 176.1 8.9 115 271-402 23-138 (139)
9 1qxn_A SUD, sulfide dehydrogen 99.8 2.2E-21 7.4E-26 175.9 10.0 108 270-405 22-132 (137)
10 2hhg_A Hypothetical protein RP 99.8 4E-21 1.4E-25 172.4 11.2 114 270-405 21-136 (139)
11 3hix_A ALR3790 protein; rhodan 99.8 2.2E-21 7.5E-26 168.0 8.4 100 277-405 2-102 (106)
12 3ilm_A ALR3790 protein; rhodan 99.8 4E-21 1.4E-25 175.3 9.8 105 272-405 1-106 (141)
13 3nhv_A BH2092 protein; alpha-b 99.8 2E-20 6.8E-25 171.1 10.5 104 271-405 16-123 (144)
14 1tq1_A AT5G66040, senescence-a 99.8 1.3E-20 4.5E-25 168.5 8.0 111 271-401 18-128 (129)
15 3flh_A Uncharacterized protein 99.8 2.1E-20 7E-25 166.2 8.5 102 271-403 15-120 (124)
16 1wv9_A Rhodanese homolog TT165 99.8 9.5E-21 3.3E-25 160.2 3.9 93 271-397 2-94 (94)
17 1e0c_A Rhodanese, sulfurtransf 99.8 9.9E-20 3.4E-24 180.2 10.9 121 270-405 8-132 (271)
18 1e0c_A Rhodanese, sulfurtransf 99.8 2.6E-19 9E-24 177.1 13.7 115 272-402 148-271 (271)
19 3i2v_A Adenylyltransferase and 99.8 7.2E-20 2.5E-24 160.7 7.7 116 272-400 2-123 (127)
20 2k0z_A Uncharacterized protein 99.8 1.4E-20 4.9E-25 163.9 3.1 99 272-404 6-104 (110)
21 1vee_A Proline-rich protein fa 99.8 1E-19 3.5E-24 163.7 7.5 115 269-405 3-127 (134)
22 2fsx_A RV0390, COG0607: rhodan 99.8 8.4E-20 2.9E-24 166.7 6.8 117 269-404 3-141 (148)
23 1urh_A 3-mercaptopyruvate sulf 99.8 3E-19 1E-23 177.8 9.1 120 271-405 4-137 (280)
24 1t3k_A Arath CDC25, dual-speci 99.8 1.4E-19 4.9E-24 166.8 5.2 108 271-405 28-144 (152)
25 3hzu_A Thiosulfate sulfurtrans 99.8 4.9E-19 1.7E-23 181.2 9.6 119 271-404 40-161 (318)
26 1urh_A 3-mercaptopyruvate sulf 99.8 3E-19 1E-23 177.8 7.8 114 272-402 153-278 (280)
27 1rhs_A Sulfur-substituted rhod 99.8 9.6E-19 3.3E-23 176.2 10.5 122 269-404 6-144 (296)
28 1uar_A Rhodanese; sulfurtransf 99.8 4.4E-18 1.5E-22 169.5 13.3 116 273-403 148-283 (285)
29 3aay_A Putative thiosulfate su 99.7 1.1E-18 3.9E-23 173.1 8.6 119 272-405 7-128 (277)
30 3g5j_A Putative ATP/GTP bindin 99.7 1.4E-18 4.9E-23 153.2 8.3 109 271-397 5-131 (134)
31 2wlr_A Putative thiosulfate su 99.7 4.7E-18 1.6E-22 179.7 13.1 158 228-403 63-251 (423)
32 3olh_A MST, 3-mercaptopyruvate 99.7 1.1E-18 3.9E-23 177.1 8.0 113 272-400 176-299 (302)
33 1uar_A Rhodanese; sulfurtransf 99.7 8.3E-19 2.8E-23 174.8 6.5 118 272-404 9-129 (285)
34 2jtq_A Phage shock protein E; 99.7 1.1E-18 3.6E-23 144.8 5.8 83 287-401 1-83 (85)
35 1rhs_A Sulfur-substituted rhod 99.7 2.4E-18 8.1E-23 173.3 8.7 117 272-404 161-290 (296)
36 3olh_A MST, 3-mercaptopyruvate 99.7 7.1E-18 2.4E-22 171.2 10.4 121 270-404 21-159 (302)
37 3aay_A Putative thiosulfate su 99.7 8.4E-18 2.9E-22 166.8 8.3 113 273-403 146-276 (277)
38 1c25_A CDC25A; hydrolase, cell 99.7 9E-18 3.1E-22 154.6 7.7 109 271-404 23-149 (161)
39 2ouc_A Dual specificity protei 99.7 1.2E-17 4.3E-22 148.3 7.6 121 272-404 2-140 (142)
40 2vsw_A Dual specificity protei 99.7 1.1E-17 3.7E-22 152.6 7.3 123 271-405 4-136 (153)
41 3hzu_A Thiosulfate sulfurtrans 99.7 4.2E-17 1.4E-21 166.8 11.5 112 273-404 181-310 (318)
42 3tp9_A Beta-lactamase and rhod 99.7 3.7E-17 1.3E-21 174.5 11.3 101 271-402 374-474 (474)
43 1okg_A Possible 3-mercaptopyru 99.7 8.9E-18 3E-22 176.0 6.2 116 271-404 14-145 (373)
44 1yt8_A Thiosulfate sulfurtrans 99.7 4.6E-17 1.6E-21 177.4 11.6 107 271-405 7-113 (539)
45 2j6p_A SB(V)-AS(V) reductase; 99.7 5.8E-17 2E-21 149.0 8.8 107 271-402 5-122 (152)
46 2a2k_A M-phase inducer phospha 99.7 4.5E-17 1.5E-21 152.1 8.1 109 271-403 24-150 (175)
47 1qb0_A Protein (M-phase induce 99.7 6.6E-17 2.3E-21 156.5 8.7 108 271-403 44-170 (211)
48 1yt8_A Thiosulfate sulfurtrans 99.7 1.6E-16 5.4E-21 173.2 11.1 105 271-406 377-481 (539)
49 2eg4_A Probable thiosulfate su 99.7 2.2E-16 7.5E-21 153.3 10.0 97 273-401 123-229 (230)
50 2wlr_A Putative thiosulfate su 99.7 1.2E-16 4.1E-21 169.0 8.5 118 273-406 274-410 (423)
51 4f67_A UPF0176 protein LPG2838 99.6 2.6E-16 8.8E-21 158.7 9.9 103 271-398 122-224 (265)
52 3f4a_A Uncharacterized protein 99.6 1.8E-16 6E-21 149.2 8.0 112 271-402 31-158 (169)
53 3op3_A M-phase inducer phospha 99.6 4E-16 1.4E-20 152.8 7.4 107 271-402 57-182 (216)
54 1hzm_A Dual specificity protei 99.6 2.6E-16 8.9E-21 143.1 4.3 111 271-400 16-145 (154)
55 1okg_A Possible 3-mercaptopyru 99.6 3.5E-16 1.2E-20 163.9 4.1 104 286-403 173-295 (373)
56 3tg1_B Dual specificity protei 99.6 2.7E-15 9.3E-20 138.3 8.2 107 271-396 11-142 (158)
57 3utn_X Thiosulfate sulfurtrans 99.5 9E-15 3.1E-19 151.3 9.3 121 271-403 28-161 (327)
58 2eg4_A Probable thiosulfate su 99.5 4.8E-15 1.6E-19 143.8 6.5 98 284-403 3-104 (230)
59 3utn_X Thiosulfate sulfurtrans 99.5 2.3E-14 8E-19 148.3 11.3 164 226-399 98-319 (327)
60 1whb_A KIAA0055; deubiqutinati 99.5 3E-14 1E-18 131.4 9.2 117 270-405 14-149 (157)
61 2gwf_A Ubiquitin carboxyl-term 99.5 3.6E-14 1.2E-18 131.4 8.7 115 270-403 19-152 (157)
62 3r2u_A Metallo-beta-lactamase 99.5 6.2E-15 2.1E-19 157.9 0.0 87 278-395 379-465 (466)
63 3tp9_A Beta-lactamase and rhod 99.3 5.4E-13 1.8E-17 142.4 6.4 102 271-405 273-375 (474)
64 3r2u_A Metallo-beta-lactamase 98.9 2E-09 6.8E-14 115.3 6.7 112 286-438 295-408 (466)
65 3iwa_A FAD-dependent pyridine 98.2 2.7E-07 9.2E-12 97.7 0.1 114 110-256 311-430 (472)
66 4eqs_A Coenzyme A disulfide re 98.1 2.3E-07 7.8E-12 98.1 -1.8 112 110-255 293-408 (437)
67 3kd9_A Coenzyme A disulfide re 98.0 5.2E-07 1.8E-11 94.9 -1.9 113 109-255 296-412 (449)
68 3urh_A Dihydrolipoyl dehydroge 97.5 1.1E-05 3.8E-10 85.8 -0.6 126 93-256 333-461 (491)
69 4dna_A Probable glutathione re 97.4 1.6E-05 5.4E-10 84.0 -0.6 126 93-255 301-429 (463)
70 3oc4_A Oxidoreductase, pyridin 97.4 7.3E-06 2.5E-10 86.3 -3.8 111 110-255 296-410 (452)
71 3lad_A Dihydrolipoamide dehydr 97.3 2.2E-05 7.4E-10 83.0 -1.4 126 93-256 313-441 (476)
72 3o0h_A Glutathione reductase; 97.3 2.4E-05 8.3E-10 83.2 -1.4 126 93-255 321-449 (484)
73 3l8k_A Dihydrolipoyl dehydroge 97.2 3.5E-05 1.2E-09 81.5 -1.1 126 93-256 303-434 (466)
74 3cgb_A Pyridine nucleotide-dis 97.1 3.7E-05 1.3E-09 81.8 -2.0 89 110-224 335-427 (480)
75 3dk9_A Grase, GR, glutathione 97.0 7.3E-05 2.5E-09 79.1 -1.0 127 93-255 326-457 (478)
76 1nhp_A NADH peroxidase; oxidor 96.7 7.2E-05 2.5E-09 78.5 -4.0 89 110-224 298-390 (447)
77 2cdu_A NADPH oxidase; flavoenz 96.7 9.6E-05 3.3E-09 77.6 -3.1 89 110-224 299-391 (452)
78 1ojt_A Surface protein; redox- 96.7 0.00022 7.4E-09 75.8 -0.7 126 92-255 318-446 (482)
79 1mo9_A ORF3; nucleotide bindin 96.7 0.00016 5.6E-09 77.9 -1.9 115 93-229 348-472 (523)
80 3ic9_A Dihydrolipoamide dehydr 96.6 0.00023 7.8E-09 76.1 -1.4 128 92-256 307-443 (492)
81 1onf_A GR, grase, glutathione 96.6 0.00031 1.1E-08 75.1 -0.6 114 110-255 353-475 (500)
82 2f46_A Hypothetical protein; s 96.4 0.0035 1.2E-07 57.1 5.5 105 271-402 28-146 (156)
83 2bc0_A NADH oxidase; flavoprot 96.4 0.00022 7.5E-09 76.0 -3.0 89 110-224 343-436 (490)
84 3qfa_A Thioredoxin reductase 1 96.4 0.00034 1.1E-08 75.4 -1.6 108 93-229 349-463 (519)
85 1ebd_A E3BD, dihydrolipoamide 95.9 0.0011 3.8E-08 69.6 -0.8 107 92-229 302-411 (455)
86 2qae_A Lipoamide, dihydrolipoy 95.8 0.0012 4.2E-08 69.6 -0.7 108 92-229 308-418 (468)
87 3dgz_A Thioredoxin reductase 2 95.8 0.00085 2.9E-08 71.3 -2.1 119 93-255 321-454 (488)
88 1dxl_A Dihydrolipoamide dehydr 95.7 0.0014 4.8E-08 68.9 -0.9 107 92-229 311-420 (470)
89 2eq6_A Pyruvate dehydrogenase 95.6 0.0015 5.2E-08 69.0 -0.8 125 93-255 304-430 (464)
90 3dgh_A TRXR-1, thioredoxin red 95.6 0.002 6.7E-08 68.4 -0.1 119 93-255 321-454 (483)
91 2a8x_A Dihydrolipoyl dehydroge 95.6 0.0012 4E-08 69.6 -2.0 108 92-229 303-414 (464)
92 2wpf_A Trypanothione reductase 95.4 0.0019 6.6E-08 69.1 -1.1 119 92-255 324-454 (495)
93 1ges_A Glutathione reductase; 95.3 0.002 6.9E-08 67.9 -1.2 127 92-255 297-429 (450)
94 1xdi_A RV3303C-LPDA; reductase 95.3 0.0023 8E-08 68.1 -0.7 109 92-230 311-422 (499)
95 1zmd_A Dihydrolipoyl dehydroge 95.3 0.0023 7.8E-08 67.6 -0.8 107 92-229 314-423 (474)
96 2hqm_A GR, grase, glutathione 95.3 0.0031 1.1E-07 67.0 0.1 126 92-255 316-450 (479)
97 2r9z_A Glutathione amide reduc 95.1 0.0033 1.1E-07 66.5 -0.5 114 92-237 296-415 (463)
98 1zk7_A HGII, reductase, mercur 95.0 0.0029 1E-07 66.6 -1.1 92 110-228 316-411 (467)
99 1fec_A Trypanothione reductase 94.6 0.0046 1.6E-07 66.0 -0.9 68 92-165 320-390 (490)
100 4b1b_A TRXR, thioredoxin reduc 94.3 0.0056 1.9E-07 67.0 -1.0 68 93-165 353-423 (542)
101 1v59_A Dihydrolipoamide dehydr 94.3 0.0058 2E-07 64.4 -1.0 103 92-224 319-424 (478)
102 1lvl_A Dihydrolipoamide dehydr 93.8 0.0072 2.5E-07 63.7 -1.3 103 92-224 299-404 (458)
103 2yqu_A 2-oxoglutarate dehydrog 92.6 0.014 4.9E-07 61.2 -1.5 90 110-224 309-401 (455)
104 2x8g_A Thioredoxin glutathione 91.0 0.04 1.4E-06 60.0 -0.2 63 92-159 427-492 (598)
105 2nt2_A Protein phosphatase sli 80.3 4.4 0.00015 35.5 7.3 27 354-380 80-109 (145)
106 3rgo_A Protein-tyrosine phosph 79.9 1.3 4.3E-05 39.1 3.6 27 354-380 88-117 (157)
107 2r0b_A Serine/threonine/tyrosi 79.5 5.4 0.00019 35.1 7.7 27 354-380 89-118 (154)
108 4erc_A Dual specificity protei 78.2 6.1 0.00021 34.3 7.5 28 353-380 86-116 (150)
109 2e0t_A Dual specificity phosph 76.3 3.4 0.00012 36.3 5.4 27 354-380 84-113 (151)
110 2hcm_A Dual specificity protei 74.0 7.7 0.00026 34.7 7.2 27 354-380 88-117 (164)
111 1ywf_A Phosphotyrosine protein 72.1 11 0.00037 37.9 8.4 27 355-381 173-201 (296)
112 1xri_A AT1G05000; structural g 71.7 2.7 9.2E-05 37.0 3.5 27 354-380 91-119 (151)
113 3ezz_A Dual specificity protei 69.2 15 0.00051 31.9 7.7 27 354-380 80-109 (144)
114 2img_A Dual specificity protei 68.7 13 0.00043 32.1 7.1 19 354-372 88-107 (151)
115 1wrm_A Dual specificity phosph 68.4 11 0.00039 33.7 7.0 27 354-380 82-111 (165)
116 3s4e_A Dual specificity protei 67.8 18 0.0006 31.6 7.9 27 354-380 80-109 (144)
117 2g6z_A Dual specificity protei 64.8 14 0.00049 35.3 7.2 27 354-380 82-111 (211)
118 1yz4_A DUSP15, dual specificit 64.8 19 0.00065 31.9 7.7 27 354-380 83-112 (160)
119 1zzw_A Dual specificity protei 63.5 13 0.00045 32.4 6.2 27 354-380 82-111 (149)
120 3f81_A Dual specificity protei 63.1 15 0.00052 33.2 6.8 26 355-380 115-143 (183)
121 1v8c_A MOAD related protein; r 62.3 0.94 3.2E-05 42.4 -1.6 27 288-326 122-148 (168)
122 3rz2_A Protein tyrosine phosph 60.5 16 0.00054 33.6 6.5 28 353-380 115-144 (189)
123 2j16_A SDP-1, tyrosine-protein 59.9 11 0.00038 35.1 5.4 27 354-380 116-145 (182)
124 2wgp_A Dual specificity protei 59.0 26 0.00088 32.4 7.7 27 354-380 102-131 (190)
125 2esb_A Dual specificity protei 57.5 29 0.00098 31.9 7.7 27 354-380 96-125 (188)
126 3emu_A Leucine rich repeat and 55.5 24 0.00081 31.7 6.6 27 354-380 86-115 (161)
127 2oud_A Dual specificity protei 53.9 23 0.00078 32.2 6.3 27 354-380 86-115 (177)
128 1fpz_A Cyclin-dependent kinase 53.8 34 0.0012 31.9 7.6 24 354-377 132-157 (212)
129 3s4o_A Protein tyrosine phosph 53.5 37 0.0013 29.6 7.5 24 354-377 108-133 (167)
130 2o8n_A APOA-I binding protein; 49.2 27 0.00092 34.8 6.4 45 356-401 80-137 (265)
131 1rxd_A Protein tyrosine phosph 49.2 62 0.0021 27.9 8.1 28 353-380 94-123 (159)
132 1jzt_A Hypothetical 27.5 kDa p 45.5 34 0.0012 33.5 6.4 45 356-401 59-117 (246)
133 3d3k_A Enhancer of mRNA-decapp 43.2 23 0.0008 35.0 4.8 30 356-386 86-118 (259)
134 3cm3_A Late protein H1, dual s 41.9 40 0.0014 30.4 5.9 27 354-380 107-136 (176)
135 3rss_A Putative uncharacterize 40.9 26 0.00088 38.0 5.1 48 354-401 51-110 (502)
136 3d3j_A Enhancer of mRNA-decapp 39.8 27 0.00093 35.4 4.8 45 356-401 133-191 (306)
137 4f0j_A Probable hydrolytic enz 38.5 60 0.0021 29.6 6.6 80 354-439 44-127 (315)
138 2q05_A Late protein H1, dual s 35.9 70 0.0024 29.5 6.7 19 354-372 124-143 (195)
139 2jgn_A DBX, DDX3, ATP-dependen 35.1 32 0.0011 31.4 4.1 38 353-391 44-81 (185)
140 4fak_A Ribosomal RNA large sub 31.6 55 0.0019 30.4 5.1 79 343-421 62-151 (163)
141 1xhc_A NADH oxidase /nitrite r 31.0 23 0.00079 35.8 2.6 61 92-154 262-325 (367)
142 3nme_A Ptpkis1 protein, SEX4 g 29.8 90 0.0031 31.1 6.7 26 355-380 106-134 (294)
143 3llc_A Putative hydrolase; str 29.6 95 0.0032 27.6 6.3 74 356-436 37-116 (270)
144 3klj_A NAD(FAD)-dependent dehy 29.5 30 0.001 35.4 3.2 60 93-154 260-322 (385)
145 3sty_A Methylketone synthase 1 28.5 97 0.0033 27.6 6.2 79 354-438 10-93 (267)
146 2hxp_A Dual specificity protei 28.3 49 0.0017 29.2 4.0 27 354-380 84-113 (155)
147 2hjv_A ATP-dependent RNA helic 27.2 46 0.0016 29.3 3.6 36 354-390 34-69 (163)
148 1ohe_A CDC14B, CDC14B2 phospha 26.9 1.2E+02 0.004 31.1 7.1 28 353-380 267-297 (348)
149 3qit_A CURM TE, polyketide syn 26.9 1.2E+02 0.0039 27.0 6.3 78 355-438 25-107 (286)
150 2rb4_A ATP-dependent RNA helic 25.1 47 0.0016 29.5 3.3 36 354-390 33-68 (175)
151 4h3k_B RNA polymerase II subun 24.9 69 0.0023 31.2 4.5 32 356-388 26-58 (214)
152 1tvm_A PTS system, galactitol- 24.9 55 0.0019 28.0 3.6 28 354-381 20-52 (113)
153 2y96_A Dual specificity phosph 24.1 59 0.002 30.8 4.0 28 353-380 137-167 (219)
154 1t5i_A C_terminal domain of A 24.1 56 0.0019 29.2 3.6 36 354-390 30-65 (172)
155 2gi4_A Possible phosphotyrosin 23.7 33 0.0011 31.1 2.0 37 357-393 3-45 (156)
156 1fuk_A Eukaryotic initiation f 23.1 65 0.0022 28.3 3.8 36 354-390 29-64 (165)
157 1jl3_A Arsenate reductase; alp 22.9 86 0.0029 27.5 4.5 37 356-392 4-41 (139)
158 3to5_A CHEY homolog; alpha(5)b 22.8 1.2E+02 0.004 26.5 5.4 43 353-395 10-52 (134)
159 1u2p_A Ptpase, low molecular w 22.8 44 0.0015 30.3 2.6 38 356-393 5-48 (163)
160 3pe6_A Monoglyceride lipase; a 22.6 98 0.0033 27.8 5.0 33 354-387 40-76 (303)
161 2cwd_A Low molecular weight ph 22.4 35 0.0012 31.0 1.9 41 354-394 3-49 (161)
162 3rof_A Low molecular weight pr 22.4 46 0.0016 30.5 2.7 38 356-393 7-49 (158)
163 2pq5_A Dual specificity protei 21.6 69 0.0024 29.8 3.8 27 354-380 130-159 (205)
164 2pfu_A Biopolymer transport EX 21.1 1.2E+02 0.0042 24.4 4.9 34 353-386 55-91 (99)
165 2l17_A Synarsc, arsenate reduc 20.8 93 0.0032 27.3 4.3 36 356-391 5-41 (134)
166 3p2m_A Possible hydrolase; alp 20.2 1.1E+02 0.0037 29.1 5.0 76 357-438 83-158 (330)
No 1
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.94 E-value=2.1e-27 Score=256.31 Aligned_cols=221 Identities=20% Similarity=0.255 Sum_probs=177.6
Q ss_pred hhhhHhhhHHHHHHHhhccccccccccccccccc---eeccccchhhhhhhhccceeeeehhchhcccceeccCCceeeE
Q 008662 110 SLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSK---LTNFSTDLKEASSKATVAAVDVLRNTIVALEESMTNGASFVVY 186 (558)
Q Consensus 110 ~~~~a~~~~r~~~d~~~~g~~~~~~~~~~~~~~~---~t~astgl~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 186 (558)
.+..|.+|||.+|+|++| ....+++...+...+ ...+++|++|+.+++.|++|.+ ......+++.|
T Consensus 320 ~~~~A~~~g~~aa~~i~g-~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~g~~~~~----------~~~~~~~~~~~ 388 (565)
T 3ntd_A 320 LAGPANRQGRMAADNMFG-REERYQGTQGTAICKVFDLAVGATGKNEKQLKQAGIAFEK----------VYVHTASHASY 388 (565)
T ss_dssp CHHHHHHHHHHHHHHHTT-CCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCCEE----------EEEEEESSCTT
T ss_pred cHHHHHHHHHHHHHHhcC-CCccCCCcccceEEEEcCcEEEEecCCHHHHHHcCCCeEE----------EEEecCcccCc
Confidence 567899999999999994 667788877766544 6789999999999999999776 44455677888
Q ss_pred ccCCCccCCChhHHHhhhhhhhhcceee-ccccchhhHHHHHHHHHHHHhcCCCCCCCcchhhhhhhhHHH-HH---HHH
Q 008662 187 YYGTTKESLPPEIRDALNLYEDRAVKLW-RPVGSALQQQVSVAIEGLERSLGFDPNDPIVPFVVFLGTSAT-LW---IFY 261 (558)
Q Consensus 187 ~pg~~~~~l~p~ik~~~~~~~~~~k~i~-~~~G~ilgaQv~~g~~gvdkrigf~~~~PVla~aI~~g~t~~-L~---l~y 261 (558)
|||..+..+ |+|+ +.+|++||+| ++|-+++..+|+ .++.++..+.+.. +. +.|
T Consensus 389 ~~~~~~~~~---------------k~v~~~~~~~ilG~~-~~g~~a~~e~i~------~~~~ai~~~~~~~~l~~~~~~~ 446 (565)
T 3ntd_A 389 YPGAEVVSF---------------KLLFDPVKGTIFGAQ-AVGKDGIDKRID------VMAVAQRAGMTVEQLQHLELSY 446 (565)
T ss_dssp STTCCEEEE---------------EEEECTTTCBEEEEE-EEESSSHHHHHH------HHHHHHHTTCBHHHHTTCCCCC
T ss_pred CCCCceEEE---------------EEEEECCCCEEEEEE-EECCccHHHHHH------HHHHHHHcCCCHHHHhhhhhcc
Confidence 999988877 9999 6889999998 777766666666 6666666666554 10 011
Q ss_pred -----------------HHHHhCCCCCCcCHHHHHHHHhCCCCcEEEEcCChhhHhhCCCCCccccccccccccCccccc
Q 008662 262 -----------------WWWTYGGYSGDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVG 324 (558)
Q Consensus 262 -----------------~~~~~~G~~g~ISp~Ea~elL~~~~~avLIDVRs~~Ef~~GHIPGA~gai~~d~~nIPL~eL~ 324 (558)
+.+...+....|+++++.++ +++.+|||||++.||+.+|||||+ |+|++++.
T Consensus 447 ~P~~~~~~~~i~~aa~~~~~~~~~~~~~i~~~~~~~~---~~~~~~iDvR~~~e~~~~~i~ga~--------~ip~~~l~ 515 (565)
T 3ntd_A 447 APPYGSAKDVINQAAFVASNIIKGDATPIHFDQIDNL---SEDQLLLDVRNPGELQNGGLEGAV--------NIPVDELR 515 (565)
T ss_dssp CTTTCCSSCHHHHHHHHHHHHHHTSCCEECTTTTTSC---CTTEEEEECSCGGGGGGCCCTTCE--------ECCGGGTT
T ss_pred CcccCchhhhhhhhhhhhhhccccccceeeHHHHHhC---CCCcEEEEeCCHHHHhcCCCCCcE--------ECCHHHHH
Confidence 11333455567898887766 367899999999999999999999 99998877
Q ss_pred chhHhhhcCchhhhhHHHHHHHhhhcccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcC
Q 008662 325 GSVKKLLRGGRELDDTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEG 397 (558)
Q Consensus 325 ~~l~ell~~~~~L~~ll~aaGI~~Lk~~~kdk~IVVyC~sG~RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaAG 397 (558)
..+.+ ++++++||+||++|.||..+++.|+++|| +|++|+|||.+|+++|
T Consensus 516 ~~~~~----------------------~~~~~~iv~~c~~g~rs~~a~~~l~~~G~-~v~~l~gG~~~w~~~g 565 (565)
T 3ntd_A 516 DRMHE----------------------LPKDKEIIIFSQVGLRGNVAYRQLVNNGY-RARNLIGGYRTYKFAS 565 (565)
T ss_dssp TSGGG----------------------SCTTSEEEEECSSSHHHHHHHHHHHHTTC-CEEEETTHHHHHHHTC
T ss_pred HHHhh----------------------cCCcCeEEEEeCCchHHHHHHHHHHHcCC-CEEEEcChHHHHHhCc
Confidence 65443 36899999999999999999999999999 9999999999999876
No 2
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.93 E-value=2.9e-27 Score=257.70 Aligned_cols=224 Identities=18% Similarity=0.168 Sum_probs=178.8
Q ss_pred hhhhhHhhhHHHHHHHhhccccccccccccccccc---eeccccchhhhhhhhccceeeeehhchhcccceeccCCceee
Q 008662 109 SSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSK---LTNFSTDLKEASSKATVAAVDVLRNTIVALEESMTNGASFVV 185 (558)
Q Consensus 109 ~~~~~a~~~~r~~~d~~~~g~~~~~~~~~~~~~~~---~t~astgl~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (558)
.....|.+|||.+|+|++|.....+.+...+.+.+ ...+++|++|+.+++.|++|.+ ......+++.
T Consensus 334 ~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~a~vGlte~~a~~~g~~~~~----------~~~~~~~~~~ 403 (588)
T 3ics_A 334 PLAWPANRQGRMLADIIHGHTDSLYKGTLGTSVAKVFDLTVATTGLNEKILKRLNIPYEV----------VHVQANSHAG 403 (588)
T ss_dssp CCHHHHHHHHHHHHHHHTTCCSSCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCCEE----------EEEEEESSCT
T ss_pred ccHHHHHHHHHHHHHHhcCCCccccCCcccceEEEECCeEEEEecCCHHHHHHcCCCeEE----------EEEecCCccc
Confidence 35668999999999999942667788888888765 6689999999999999999887 4444566777
Q ss_pred EccCCCccCCChhHHHhhhhhhhhcceee-ccccchhhHHHHHHHHHHHHhcCCCCCCCcchhhhhhhhHHH-H------
Q 008662 186 YYYGTTKESLPPEIRDALNLYEDRAVKLW-RPVGSALQQQVSVAIEGLERSLGFDPNDPIVPFVVFLGTSAT-L------ 257 (558)
Q Consensus 186 y~pg~~~~~l~p~ik~~~~~~~~~~k~i~-~~~G~ilgaQv~~g~~gvdkrigf~~~~PVla~aI~~g~t~~-L------ 257 (558)
||+|..+..+ |+|+ +.+|++||+| ++|-++...+|+ .+++++..+.+.. +
T Consensus 404 ~~~~~~~~~~---------------k~i~~~~~~~ilG~~-~~g~~~~~e~i~------~~~~ai~~~~t~~~l~~~~~~ 461 (588)
T 3ics_A 404 YYPNATPVLI---------------KLIFNKDSGKIYGAQ-TLGRDGVDKRMD------VIATAIKANLTVLDLPDLELS 461 (588)
T ss_dssp TSTTCCEEEE---------------EEEECTTTCBEEEEE-EEESSSHHHHHH------HHHHHHHTTCBTTTGGGCCCC
T ss_pred cCCCCceEEE---------------EEEEECCCCeEEEEE-EEcCCcHHHHHH------HHHHHHHcCCCHHHhhhhhhc
Confidence 8999988877 9999 6899999998 666555555555 5555555544432 0
Q ss_pred --------------HHHHHHHHhCCCCCCcCHHHHHHHHhCCCCcEEEEcCChhhHhhCCCCCccccccccccccCcccc
Q 008662 258 --------------WIFYWWWTYGGYSGDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEV 323 (558)
Q Consensus 258 --------------~l~y~~~~~~G~~g~ISp~Ea~elL~~~~~avLIDVRs~~Ef~~GHIPGA~gai~~d~~nIPL~eL 323 (558)
....+.+...+....|+++|+.++++ ++.+|||||++.||+.+|||||+ |+|+.++
T Consensus 462 ~~P~~~~~~d~i~~aa~~a~n~~~~~~~~i~~~~~~~~~~--~~~~~iDvR~~~e~~~ghi~ga~--------~ip~~~l 531 (588)
T 3ics_A 462 YAPPYSSAKDPVNMVGYAASNIVDGFVDTVQWHEIDRIVE--NGGYLIDVREPNELKQGMIKGSI--------NIPLDEL 531 (588)
T ss_dssp CSTTTCCSSCHHHHHHHHHHHHHTTSCCEECTTTHHHHHH--TTCEEEECSCGGGGGGCBCTTEE--------ECCHHHH
T ss_pred cCCCcccccchhhhcccccccccccccceecHHHHHHHhc--CCCEEEEcCCHHHHhcCCCCCCE--------ECCHHHH
Confidence 01112245566667899999999985 46899999999999999999999 9999877
Q ss_pred cchhHhhhcCchhhhhHHHHHHHhhhcccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcC
Q 008662 324 GGSVKKLLRGGRELDDTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEG 397 (558)
Q Consensus 324 ~~~l~ell~~~~~L~~ll~aaGI~~Lk~~~kdk~IVVyC~sG~RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaAG 397 (558)
...+.+ ++++++||+||++|.||..+++.|+++||+ |++|+|||.+|+++.
T Consensus 532 ~~~~~~----------------------l~~~~~iv~~C~~g~rs~~a~~~l~~~G~~-v~~l~GG~~~w~~~~ 582 (588)
T 3ics_A 532 RDRLEE----------------------VPVDKDIYITCQLGMRGYVAARMLMEKGYK-VKNVDGGFKLYGTVL 582 (588)
T ss_dssp TTCGGG----------------------SCSSSCEEEECSSSHHHHHHHHHHHHTTCC-EEEETTHHHHHHHHC
T ss_pred HHHHhh----------------------CCCCCeEEEECCCCcHHHHHHHHHHHcCCc-EEEEcchHHHHHhhh
Confidence 665443 368899999999999999999999999998 999999999999853
No 3
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=99.89 E-value=9.3e-24 Score=183.88 Aligned_cols=101 Identities=22% Similarity=0.377 Sum_probs=90.9
Q ss_pred CCcCHHHHHHHHhCCCCcEEEEcCChhhHhhCCCCCccccccccccccCcccccchhHhhhcCchhhhhHHHHHHHhhhc
Q 008662 271 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 350 (558)
Q Consensus 271 g~ISp~Ea~elL~~~~~avLIDVRs~~Ef~~GHIPGA~gai~~d~~nIPL~eL~~~l~ell~~~~~L~~ll~aaGI~~Lk 350 (558)
+.||++|+.+++.++++.+|||||++.||+.||||||+ |+|++++.+.+.+
T Consensus 2 k~Is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~--------~ip~~~l~~~~~~--------------------- 52 (103)
T 3iwh_A 2 KSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAK--------LIPMDTIPDNLNS--------------------- 52 (103)
T ss_dssp CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCE--------ECCGGGGGGCGGG---------------------
T ss_pred CCcCHHHHHHHHhCCCCeEEEECCChhHHhcCccCCcc--------cCcccchhhhhhh---------------------
Confidence 47999999999877778999999999999999999999 9999888765543
Q ss_pred ccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcCCCeec
Q 008662 351 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKE 402 (558)
Q Consensus 351 ~~~kdk~IVVyC~sG~RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaAGLPV~~ 402 (558)
++++++||+||++|.||..+++.|+++||+ +++|.|||.+|+++|+|+++
T Consensus 53 -l~~~~~ivv~C~~G~rS~~aa~~L~~~G~~-~~~l~GG~~~W~~~g~pves 102 (103)
T 3iwh_A 53 -FNKNEIYYIVCAGGVRSAKVVEYLEANGID-AVNVEGGMHAWGDEGLEIKS 102 (103)
T ss_dssp -CCTTSEEEEECSSSSHHHHHHHHHHTTTCE-EEEETTHHHHHCSSSCBCCC
T ss_pred -hcCCCeEEEECCCCHHHHHHHHHHHHcCCC-EEEecChHHHHHHCCCccee
Confidence 378999999999999999999999999995 55799999999999999975
No 4
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=99.88 E-value=3.2e-23 Score=177.26 Aligned_cols=99 Identities=20% Similarity=0.324 Sum_probs=89.7
Q ss_pred CCcCHHHHHHHHhCCCCcEEEEcCChhhHhhCCCCCccccccccccccCcccccchhHhhhcCchhhhhHHHHHHHhhhc
Q 008662 271 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 350 (558)
Q Consensus 271 g~ISp~Ea~elL~~~~~avLIDVRs~~Ef~~GHIPGA~gai~~d~~nIPL~eL~~~l~ell~~~~~L~~ll~aaGI~~Lk 350 (558)
..|+++++.++++++++.+|||||++.||..||||||+ |+|+.++.+.+.+
T Consensus 2 ~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~--------~ip~~~l~~~~~~--------------------- 52 (100)
T 3foj_A 2 ESITVTELKEKILDANPVNIVDVRTDQETAMGIIPGAE--------TIPMNSIPDNLNY--------------------- 52 (100)
T ss_dssp CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCE--------ECCGGGGGGCGGG---------------------
T ss_pred CccCHHHHHHHHhcCCCcEEEECCCHHHHhcCcCCCCE--------ECCHHHHHHHHHh---------------------
Confidence 46899999999865678999999999999999999999 9999887665443
Q ss_pred ccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcCCCe
Q 008662 351 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRI 400 (558)
Q Consensus 351 ~~~kdk~IVVyC~sG~RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaAGLPV 400 (558)
++++++||+||++|.||..+++.|+++|| +|++|+|||.+|+++|+|+
T Consensus 53 -l~~~~~ivvyC~~g~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~g~pv 100 (100)
T 3foj_A 53 -FNDNETYYIICKAGGRSAQVVQYLEQNGV-NAVNVEGGMDEFGDEGLEH 100 (100)
T ss_dssp -SCTTSEEEEECSSSHHHHHHHHHHHTTTC-EEEEETTHHHHHCSSSCBC
T ss_pred -CCCCCcEEEEcCCCchHHHHHHHHHHCCC-CEEEecccHHHHHHcCCCC
Confidence 36899999999999999999999999999 9999999999999999986
No 5
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=99.88 E-value=5.2e-23 Score=176.62 Aligned_cols=101 Identities=22% Similarity=0.386 Sum_probs=91.1
Q ss_pred CCcCHHHHHHHHhCCCCcEEEEcCChhhHhhCCCCCccccccccccccCcccccchhHhhhcCchhhhhHHHHHHHhhhc
Q 008662 271 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 350 (558)
Q Consensus 271 g~ISp~Ea~elL~~~~~avLIDVRs~~Ef~~GHIPGA~gai~~d~~nIPL~eL~~~l~ell~~~~~L~~ll~aaGI~~Lk 350 (558)
..|+++++.+++.++++.+|||||++.||..||||||+ |+|+.++...+.+
T Consensus 2 ~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~--------~ip~~~l~~~~~~--------------------- 52 (103)
T 3eme_A 2 KSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAK--------LIPMDTIPDNLNS--------------------- 52 (103)
T ss_dssp CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCE--------ECCGGGGGGCGGG---------------------
T ss_pred CccCHHHHHHHHhcCCCCEEEECCCHHHHhcCcCCCCE--------EcCHHHHHHHHHh---------------------
Confidence 46899999998865678999999999999999999999 9999887665443
Q ss_pred ccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcCCCeec
Q 008662 351 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKE 402 (558)
Q Consensus 351 ~~~kdk~IVVyC~sG~RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaAGLPV~~ 402 (558)
++++++||+||++|.||..+++.|+.+|| +|++|+|||.+|+++|+|+++
T Consensus 53 -l~~~~~iv~yC~~g~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~g~p~~~ 102 (103)
T 3eme_A 53 -FNKNEIYYIVCAGGVRSAKVVEYLEANGI-DAVNVEGGMHAWGDEGLEIKS 102 (103)
T ss_dssp -CCTTSEEEEECSSSSHHHHHHHHHHTTTC-EEEEETTHHHHHCSSSCBCCC
T ss_pred -CCCCCeEEEECCCChHHHHHHHHHHHCCC-CeEEeCCCHHHHHHCCCcCCC
Confidence 36899999999999999999999999999 999999999999999999875
No 6
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=99.86 E-value=5.1e-22 Score=172.76 Aligned_cols=102 Identities=24% Similarity=0.321 Sum_probs=89.7
Q ss_pred CCCcCHHHHHHHHhCCCCcEEEEcCChhhHhhCCCCCccccccccccccCcccccchhHhhhcCchhhhhHHHHHHHhhh
Q 008662 270 SGDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNL 349 (558)
Q Consensus 270 ~g~ISp~Ea~elL~~~~~avLIDVRs~~Ef~~GHIPGA~gai~~d~~nIPL~eL~~~l~ell~~~~~L~~ll~aaGI~~L 349 (558)
...|+++++.+++.+ .+|||||++.||..||||||+ |+|+.++...+.+
T Consensus 3 ~~~is~~el~~~l~~---~~iiDvR~~~e~~~ghIpgA~--------~ip~~~l~~~~~~-------------------- 51 (108)
T 3gk5_A 3 YRSINAADLYENIKA---YTVLDVREPFELIFGSIANSI--------NIPISELREKWKI-------------------- 51 (108)
T ss_dssp CCEECHHHHHHTTTT---CEEEECSCHHHHTTCBCTTCE--------ECCHHHHHHHGGG--------------------
T ss_pred ccEeCHHHHHHHHcC---CEEEECCCHHHHhcCcCCCCE--------EcCHHHHHHHHHh--------------------
Confidence 457999999998842 899999999999999999999 9999777654432
Q ss_pred cccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcCCCeeccCc
Q 008662 350 KIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 405 (558)
Q Consensus 350 k~~~kdk~IVVyC~sG~RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaAGLPV~~~~~ 405 (558)
++++++||+||++|.||..+++.|+++|| +|++|+|||.+|+++|+|+++..+
T Consensus 52 --l~~~~~ivvyC~~G~rs~~aa~~L~~~G~-~v~~l~GG~~~W~~~~~~~~~~~~ 104 (108)
T 3gk5_A 52 --LERDKKYAVICAHGNRSAAAVEFLSQLGL-NIVDVEGGIQSWIEEGYPVVLEHH 104 (108)
T ss_dssp --SCTTSCEEEECSSSHHHHHHHHHHHTTTC-CEEEETTHHHHHHHTTCCCBCC--
T ss_pred --CCCCCeEEEEcCCCcHHHHHHHHHHHcCC-CEEEEcCcHHHHHHcCCCCCCCCC
Confidence 36889999999999999999999999999 999999999999999999988544
No 7
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=99.85 E-value=1.2e-21 Score=169.54 Aligned_cols=102 Identities=21% Similarity=0.299 Sum_probs=90.1
Q ss_pred CCcCHHHHHHHHhCCCCcEEEEcCChhhHhhCCCCCccccccccccccCcccccchhHhhhcCchhhhhHHHHHHHhhhc
Q 008662 271 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 350 (558)
Q Consensus 271 g~ISp~Ea~elL~~~~~avLIDVRs~~Ef~~GHIPGA~gai~~d~~nIPL~eL~~~l~ell~~~~~L~~ll~aaGI~~Lk 350 (558)
..|+++++.+++.+ ++.+|||||++.||..||||||+ |+|+.++...+.+
T Consensus 5 ~~i~~~~l~~~~~~-~~~~liDvR~~~e~~~ghIpgA~--------~ip~~~l~~~~~~--------------------- 54 (108)
T 1gmx_A 5 ECINVADAHQKLQE-KEAVLVDIRDPQSFAMGHAVQAF--------HLTNDTLGAFMRD--------------------- 54 (108)
T ss_dssp EEECHHHHHHHHHT-TCCEEEECSCHHHHHHCEETTCE--------ECCHHHHHHHHHH---------------------
T ss_pred cccCHHHHHHHHhC-CCCEEEEcCCHHHHHhCCCccCE--------eCCHHHHHHHHHh---------------------
Confidence 47899999999864 56899999999999999999999 9998776554332
Q ss_pred ccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcCCCeeccC
Q 008662 351 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELK 404 (558)
Q Consensus 351 ~~~kdk~IVVyC~sG~RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaAGLPV~~~~ 404 (558)
++++++||+||++|.||..+++.|+++||++|++|+||+.+|+++ +|++...
T Consensus 55 -l~~~~~ivvyc~~g~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~-~p~~~~~ 106 (108)
T 1gmx_A 55 -NDFDTPVMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQ-FPAEVAY 106 (108)
T ss_dssp -SCTTSCEEEECSSSSHHHHHHHHHHHHTCSSEEEETTHHHHHHHH-CGGGEEC
T ss_pred -cCCCCCEEEEcCCCchHHHHHHHHHHcCCceEEEecCCHHHHHHh-CCccccc
Confidence 367899999999999999999999999999999999999999999 9997643
No 8
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=99.85 E-value=1.3e-21 Score=176.14 Aligned_cols=115 Identities=18% Similarity=0.201 Sum_probs=94.6
Q ss_pred CCcCHHHHHHHHhC-CCCcEEEEcCChhhHhhCCCCCccccccccccccCcccccchhHhhhcCchhhhhHHHHHHHhhh
Q 008662 271 GDLSPKSTLELLRG-KENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNL 349 (558)
Q Consensus 271 g~ISp~Ea~elL~~-~~~avLIDVRs~~Ef~~GHIPGA~gai~~d~~nIPL~eL~~~l~ell~~~~~L~~ll~aaGI~~L 349 (558)
..|+++++.+++.+ +++.+|||||++.||..||||||+ |+|+.++.... ..++.++.+.+...+
T Consensus 23 ~~is~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi--------nip~~~l~~~~---~~~~~~~~~~~~~~~---- 87 (139)
T 3d1p_A 23 QSYSFEDMKRIVGKHDPNVVLVDVREPSEYSIVHIPASI--------NVPYRSHPDAF---ALDPLEFEKQIGIPK---- 87 (139)
T ss_dssp EECCHHHHHHHHHHTCTTEEEEECSCHHHHHHCCCTTCE--------ECCTTTCTTGG---GSCHHHHHHHHSSCC----
T ss_pred ceecHHHHHHHHhCCCCCeEEEECcCHHHHhCCCCCCcE--------EcCHHHhhhhc---cCCHHHHHHHHhccC----
Confidence 57999999999864 357899999999999999999999 99988775432 233334443332222
Q ss_pred cccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcCCCeec
Q 008662 350 KIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKE 402 (558)
Q Consensus 350 k~~~kdk~IVVyC~sG~RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaAGLPV~~ 402 (558)
.+++++|||||++|.||..+++.|+++||++|++|+|||.+|.++|+|+..
T Consensus 88 --~~~~~~ivvyC~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 138 (139)
T 3d1p_A 88 --PDSAKELIFYCASGKRGGEAQKVASSHGYSNTSLYPGSMNDWVSHGGDKLD 138 (139)
T ss_dssp --CCTTSEEEEECSSSHHHHHHHHHHHTTTCCSEEECTTHHHHHHHTTGGGCC
T ss_pred --CCCCCeEEEECCCCchHHHHHHHHHHcCCCCeEEeCCcHHHHHHcCCCCCC
Confidence 368899999999999999999999999999999999999999999999764
No 9
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=99.85 E-value=2.2e-21 Score=175.93 Aligned_cols=108 Identities=22% Similarity=0.354 Sum_probs=93.5
Q ss_pred CCCcCHHHHHHHHhCCCCcEEEEcCChhhHhh-CC--CCCccccccccccccCcccccchhHhhhcCchhhhhHHHHHHH
Q 008662 270 SGDLSPKSTLELLRGKENAVLIDVRHEDLRER-DG--IPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVI 346 (558)
Q Consensus 270 ~g~ISp~Ea~elL~~~~~avLIDVRs~~Ef~~-GH--IPGA~gai~~d~~nIPL~eL~~~l~ell~~~~~L~~ll~aaGI 346 (558)
...|+++++.+++.++++.+|||||++.||.. || ||||+ |+|+.++.....
T Consensus 22 ~~~is~~el~~~l~~~~~~~liDVR~~~E~~~~gh~~IpgAi--------nip~~~l~~~~~------------------ 75 (137)
T 1qxn_A 22 MVMLSPKDAYKLLQENPDITLIDVRDPDELKAMGKPDVKNYK--------HMSRGKLEPLLA------------------ 75 (137)
T ss_dssp SEEECHHHHHHHHHHCTTSEEEECCCHHHHHHTCEECCSSEE--------ECCTTTSHHHHH------------------
T ss_pred CcccCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCcCCCCCE--------EcchHHhhhHHh------------------
Confidence 35899999999996346799999999999999 99 99999 999877653110
Q ss_pred hhhcccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcCCCeeccCc
Q 008662 347 RNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 405 (558)
Q Consensus 347 ~~Lk~~~kdk~IVVyC~sG~RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaAGLPV~~~~~ 405 (558)
+..++++++|||||++|.||..+++.|+.+||++|++|+|||.+|+++|+|++...+
T Consensus 76 --~~~l~~~~~ivvyC~~G~rS~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 132 (137)
T 1qxn_A 76 --KSGLDPEKPVVVFCKTAARAALAGKTLREYGFKTIYNSEGGMDKWLEEGLPSLDRSH 132 (137)
T ss_dssp --HHCCCTTSCEEEECCSSSCHHHHHHHHHHHTCSCEEEESSCHHHHHHTTCCEECCCC
T ss_pred --hccCCCCCeEEEEcCCCcHHHHHHHHHHHcCCcceEEEcCcHHHHHHCCCCcccccc
Confidence 011478999999999999999999999999999999999999999999999998655
No 10
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=99.84 E-value=4e-21 Score=172.45 Aligned_cols=114 Identities=22% Similarity=0.297 Sum_probs=91.4
Q ss_pred CCCcCHHHHHHHHhC-CCCcEEEEcCChhhHhh-CCCCCccccccccccccCcccccchhHhhhcCchhhhhHHHHHHHh
Q 008662 270 SGDLSPKSTLELLRG-KENAVLIDVRHEDLRER-DGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIR 347 (558)
Q Consensus 270 ~g~ISp~Ea~elL~~-~~~avLIDVRs~~Ef~~-GHIPGA~gai~~d~~nIPL~eL~~~l~ell~~~~~L~~ll~aaGI~ 347 (558)
...|+++++.+++.+ +++.+|||||++.||.. ||||||+ |+|+.++...+.... +..
T Consensus 21 ~~~is~~~l~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA~--------~ip~~~l~~~~~~~~--~~~----------- 79 (139)
T 2hhg_A 21 IETLTTADAIALHKSGASDVVIVDIRDPREIERDGKIPGSF--------SCTRGMLEFWIDPQS--PYA----------- 79 (139)
T ss_dssp SEEECHHHHHHHHHTTCTTEEEEECSCHHHHHHHCCCTTCE--------ECCGGGHHHHHCTTS--TTC-----------
T ss_pred cCccCHHHHHHHHhccCCCeEEEECCCHHHHHhCCCCCCeE--------ECChHHHHHhcCccc--hhh-----------
Confidence 358999999999963 35789999999999999 9999999 999877654322110 000
Q ss_pred hhcccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcCCCeeccCc
Q 008662 348 NLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 405 (558)
Q Consensus 348 ~Lk~~~kdk~IVVyC~sG~RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaAGLPV~~~~~ 405 (558)
...++++++|||||++|.||..+++.|+.+||++|++|+|||.+|+++|+|++...+
T Consensus 80 -~~~~~~~~~ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 136 (139)
T 2hhg_A 80 -KPIFQEDKKFVFYCAGGLRSALAAKTAQDMGLKPVAHIEGGFGAWRDAGGPIEAWAP 136 (139)
T ss_dssp -CGGGGSSSEEEEECSSSHHHHHHHHHHHHHTCCSEEEETTHHHHHHHTTCCCC----
T ss_pred -hccCCCCCeEEEECCCChHHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCCeecCCC
Confidence 011368999999999999999999999999999999999999999999999987543
No 11
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=99.84 E-value=2.2e-21 Score=167.99 Aligned_cols=100 Identities=14% Similarity=0.178 Sum_probs=80.0
Q ss_pred HHHHHHhC-CCCcEEEEcCChhhHhhCCCCCccccccccccccCcccccchhHhhhcCchhhhhHHHHHHHhhhcccCCC
Q 008662 277 STLELLRG-KENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKIVQDR 355 (558)
Q Consensus 277 Ea~elL~~-~~~avLIDVRs~~Ef~~GHIPGA~gai~~d~~nIPL~eL~~~l~ell~~~~~L~~ll~aaGI~~Lk~~~kd 355 (558)
|+.+++.. +++.+|||||++.||..||||||+ |+|+.++....... ++++
T Consensus 2 el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi--------~ip~~~l~~~~~~~---------------------l~~~ 52 (106)
T 3hix_A 2 VLKSRLEWGEPAFTILDVRDRSTYNDGHIMGAM--------AMPIEDLVDRASSS---------------------LEKS 52 (106)
T ss_dssp -----------CCEEEECSCHHHHHTCEETTCE--------ECCGGGHHHHHHHH---------------------SCTT
T ss_pred hHHHHHHcCCCCeEEEECCCHHHHhcCcCCCCE--------eCCHHHHHHHHHhc---------------------CCCC
Confidence 56666653 346899999999999999999999 99998765543211 3678
Q ss_pred ceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcCCCeeccCc
Q 008662 356 SKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 405 (558)
Q Consensus 356 k~IVVyC~sG~RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaAGLPV~~~~~ 405 (558)
++|||||++|.||..+++.|+.+||++|++|+|||.+|+++|+|+.+..+
T Consensus 53 ~~ivvyc~~g~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~~~~~~~~ 102 (106)
T 3hix_A 53 RDIYVYGAGDEQTSQAVNLLRSAGFEHVSELKGGLAAWKAIGGPTELEHH 102 (106)
T ss_dssp SCEEEECSSHHHHHHHHHHHHHTTCSCEEECTTHHHHHHHTTCCEEECCE
T ss_pred CeEEEEECCCChHHHHHHHHHHcCCcCEEEecCCHHHHHHCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999988544
No 12
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=99.84 E-value=4e-21 Score=175.34 Aligned_cols=105 Identities=13% Similarity=0.168 Sum_probs=91.1
Q ss_pred CcCHHHHHHHHhCC-CCcEEEEcCChhhHhhCCCCCccccccccccccCcccccchhHhhhcCchhhhhHHHHHHHhhhc
Q 008662 272 DLSPKSTLELLRGK-ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 350 (558)
Q Consensus 272 ~ISp~Ea~elL~~~-~~avLIDVRs~~Ef~~GHIPGA~gai~~d~~nIPL~eL~~~l~ell~~~~~L~~ll~aaGI~~Lk 350 (558)
.||++++.+++.++ ++.+|||||++.||..||||||+ |+|+.++......
T Consensus 1 mIs~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi--------~ip~~~l~~~~~~--------------------- 51 (141)
T 3ilm_A 1 MSDAHVLKSRLEWGEPAFTILDVRDRSTYNDGHIMGAM--------AMPIEDLVDRASS--------------------- 51 (141)
T ss_dssp -CCHHHHHHHHHHSCSCEEEEECSCHHHHHHCEETTCE--------ECCGGGHHHHHHT---------------------
T ss_pred CCCHHHHHHHHhcCCCCEEEEECCCHHHHhCCCCCCCE--------EcCHHHHHHHHHh---------------------
Confidence 38999999999643 46899999999999999999999 9999776554321
Q ss_pred ccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcCCCeeccCc
Q 008662 351 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 405 (558)
Q Consensus 351 ~~~kdk~IVVyC~sG~RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaAGLPV~~~~~ 405 (558)
.++++++|||||++|.||..+++.|+.+||++|++|+|||.+|+++|+|++...+
T Consensus 52 ~l~~~~~ivvyC~~g~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 106 (141)
T 3ilm_A 52 SLEKSRDIYVYGAGDEQTSQAVNLLRSAGFEHVSELKGGLAAWKAIGGPTEGIIE 106 (141)
T ss_dssp TSCTTSEEEEECSSHHHHHHHHHHHHHTTCCSEEECTTHHHHHHHTTCCEEEEC-
T ss_pred cCCCCCeEEEEECCChHHHHHHHHHHHcCCCCEEEecCHHHHHHHCCCCcccCCC
Confidence 1368899999999999999999999999999999999999999999999998653
No 13
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=99.82 E-value=2e-20 Score=171.14 Aligned_cols=104 Identities=17% Similarity=0.205 Sum_probs=91.2
Q ss_pred CCcCHHHHHHHHhCC-CCcEEEEcCChhhHhhCCCCCccccccccccccCcccccc-hhHhhhcCchhhhhHHHHHHHhh
Q 008662 271 GDLSPKSTLELLRGK-ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGG-SVKKLLRGGRELDDTLTAAVIRN 348 (558)
Q Consensus 271 g~ISp~Ea~elL~~~-~~avLIDVRs~~Ef~~GHIPGA~gai~~d~~nIPL~eL~~-~l~ell~~~~~L~~ll~aaGI~~ 348 (558)
..|+++++.+++.+. ++.+|||||++.||..||||||+ |+|+.++.. .+.
T Consensus 16 ~~is~~el~~~l~~~~~~~~liDvR~~~ey~~ghIpgAi--------nip~~~l~~~~~~-------------------- 67 (144)
T 3nhv_A 16 YETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAI--------SIPGNKINEDTTK-------------------- 67 (144)
T ss_dssp TEEEHHHHHHHHHTTCCSEEEEECSCHHHHHHCBCTTCE--------ECCGGGCSTTTTT--------------------
T ss_pred cccCHHHHHHHHHcCCCCEEEEECcCHHHHhcCCCCCCE--------ECCHHHHhHHHHh--------------------
Confidence 468999999999753 47899999999999999999999 999987753 221
Q ss_pred hcccCCCceEEEEeCCC--chHHHHHHHHHHccCCCEEEecchHHHHHHcCCCeeccCc
Q 008662 349 LKIVQDRSKVIVMDADG--TRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 405 (558)
Q Consensus 349 Lk~~~kdk~IVVyC~sG--~RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaAGLPV~~~~~ 405 (558)
.++++++|||||++| .||..+++.|+.+|| +|++|+|||.+|+++|+|++...+
T Consensus 68 --~l~~~~~ivvyC~~g~~~rs~~aa~~L~~~G~-~v~~l~GG~~~W~~~g~pv~~~~~ 123 (144)
T 3nhv_A 68 --RLSKEKVIITYCWGPACNGATKAAAKFAQLGF-RVKELIGGIEYWRKENGEVEGTLG 123 (144)
T ss_dssp --TCCTTSEEEEECSCTTCCHHHHHHHHHHHTTC-EEEEEESHHHHHHHTTCCCBSSSG
T ss_pred --hCCCCCeEEEEECCCCccHHHHHHHHHHHCCC-eEEEeCCcHHHHHHCCCCccCCCC
Confidence 146899999999999 699999999999999 699999999999999999998655
No 14
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=99.82 E-value=1.3e-20 Score=168.51 Aligned_cols=111 Identities=22% Similarity=0.256 Sum_probs=89.6
Q ss_pred CCcCHHHHHHHHhCCCCcEEEEcCChhhHhhCCCCCccccccccccccCcccccchhHhhhcCchhhhhHHHHHHHhhhc
Q 008662 271 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 350 (558)
Q Consensus 271 g~ISp~Ea~elL~~~~~avLIDVRs~~Ef~~GHIPGA~gai~~d~~nIPL~eL~~~l~ell~~~~~L~~ll~aaGI~~Lk 350 (558)
..|+++++.+++. ++.+|||||++.||..||||||+ |+|+..+... ..+++.+++++.+ +
T Consensus 18 ~~is~~e~~~~l~--~~~~lIDvR~~~e~~~ghIpgAi--------nip~~~~~~~--~~~~~~~~~~~~~--------~ 77 (129)
T 1tq1_A 18 SSVSVTVAHDLLL--AGHRYLDVRTPEEFSQGHACGAI--------NVPYMNRGAS--GMSKNTDFLEQVS--------S 77 (129)
T ss_dssp EEEEHHHHHHHHH--HTCCEEEESCHHHHHHCCBTTBE--------ECCSCCCSTT--TCCCTTTHHHHHT--------T
T ss_pred cccCHHHHHHHhc--CCCEEEECCCHHHHhcCCCCCcE--------ECcHhhcccc--cccCCHHHHHHHH--------h
Confidence 5799999999985 46899999999999999999999 8998544321 1122222222211 1
Q ss_pred ccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcCCCee
Q 008662 351 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIK 401 (558)
Q Consensus 351 ~~~kdk~IVVyC~sG~RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaAGLPV~ 401 (558)
.++++++|||||++|.||..+++.|+++||++|++|+|||.+|+.+|+|++
T Consensus 78 ~l~~~~~ivvyC~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 128 (129)
T 1tq1_A 78 HFGQSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKNGLPTK 128 (129)
T ss_dssp TCCTTSSEEEEESSCSHHHHHHHHHHHHHCCSEEEEECCHHHHHHHTCCCC
T ss_pred hCCCCCeEEEECCCCcHHHHHHHHHHHcCCCCeEEeCCcHHHHHhCCCCCC
Confidence 247889999999999999999999999999999999999999999999985
No 15
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=99.81 E-value=2.1e-20 Score=166.17 Aligned_cols=102 Identities=17% Similarity=0.264 Sum_probs=89.2
Q ss_pred CCcCHHHHHHHHhCC-CCcEEEEcCChhhH-hhCCCCCccccccccccccCcccccchhHhhhcCchhhhhHHHHHHHhh
Q 008662 271 GDLSPKSTLELLRGK-ENAVLIDVRHEDLR-ERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRN 348 (558)
Q Consensus 271 g~ISp~Ea~elL~~~-~~avLIDVRs~~Ef-~~GHIPGA~gai~~d~~nIPL~eL~~~l~ell~~~~~L~~ll~aaGI~~ 348 (558)
..|+++++.+++.+. ++.+|||||++.|| ..||||||+ |+|+.++...+.+
T Consensus 15 ~~is~~el~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA~--------nip~~~l~~~~~~------------------- 67 (124)
T 3flh_A 15 LYIDHHTVLADMQNATGKYVVLDVRNAPAQVKKDQIKGAI--------AMPAKDLATRIGE------------------- 67 (124)
T ss_dssp TEECHHHHHHHHHHTCCCEEEEECCCSCHHHHCCEETTCE--------ECCHHHHHHHGGG-------------------
T ss_pred ceecHHHHHHHHHcCCCCEEEEECCCHHHHHhcCcCCCCE--------ECCHHHHHHHHhc-------------------
Confidence 479999999998654 35899999999998 999999999 9999776654432
Q ss_pred hcccCCCceEEEEeCCCch--HHHHHHHHHHccCCCEEEecchHHHHHHcCCCeecc
Q 008662 349 LKIVQDRSKVIVMDADGTR--SKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKEL 403 (558)
Q Consensus 349 Lk~~~kdk~IVVyC~sG~R--S~~AA~~L~~~Gf~nVy~LdGG~~aWkaAGLPV~~~ 403 (558)
++++++|||||++|.| |..+++.|+.+||+ |++|+||+.+|+.+|+|+.+.
T Consensus 68 ---l~~~~~ivvyC~~g~r~~s~~a~~~L~~~G~~-v~~l~GG~~~W~~~~~p~~~~ 120 (124)
T 3flh_A 68 ---LDPAKTYVVYDWTGGTTLGKTALLVLLSAGFE-AYELAGALEGWKGMQLPLEHH 120 (124)
T ss_dssp ---SCTTSEEEEECSSSSCSHHHHHHHHHHHHTCE-EEEETTHHHHHHHTTCCEEC-
T ss_pred ---CCCCCeEEEEeCCCCchHHHHHHHHHHHcCCe-EEEeCCcHHHHHHcCCCCCcc
Confidence 3689999999999998 89999999999996 999999999999999998774
No 16
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=99.80 E-value=9.5e-21 Score=160.19 Aligned_cols=93 Identities=20% Similarity=0.228 Sum_probs=76.8
Q ss_pred CCcCHHHHHHHHhCCCCcEEEEcCChhhHhhCCCCCccccccccccccCcccccchhHhhhcCchhhhhHHHHHHHhhhc
Q 008662 271 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 350 (558)
Q Consensus 271 g~ISp~Ea~elL~~~~~avLIDVRs~~Ef~~GHIPGA~gai~~d~~nIPL~eL~~~l~ell~~~~~L~~ll~aaGI~~Lk 350 (558)
..|+++++.+++.+ +.+|||||++.||..+|||||+ |+|+.++...+.+
T Consensus 2 ~~is~~~l~~~~~~--~~~liDvR~~~e~~~ghi~gAi--------~ip~~~l~~~~~~--------------------- 50 (94)
T 1wv9_A 2 RKVRPEELPALLEE--GVLVVDVRPADRRSTPLPFAAE--------WVPLEKIQKGEHG--------------------- 50 (94)
T ss_dssp CEECGGGHHHHHHT--TCEEEECCCC--CCSCCSSCCE--------ECCHHHHTTTCCC---------------------
T ss_pred CcCCHHHHHHHHHC--CCEEEECCCHHHHhcccCCCCE--------ECCHHHHHHHHHh---------------------
Confidence 36899999999863 7899999999999999999999 9998776554321
Q ss_pred ccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcC
Q 008662 351 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEG 397 (558)
Q Consensus 351 ~~~kdk~IVVyC~sG~RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaAG 397 (558)
+++ ++||+||++|.||..+++.|+++||+ |++|+||+.+|+++|
T Consensus 51 -l~~-~~ivvyC~~g~rs~~a~~~L~~~G~~-v~~l~GG~~~W~~~G 94 (94)
T 1wv9_A 51 -LPR-RPLLLVCEKGLLSQVAALYLEAEGYE-AMSLEGGLQALTQGK 94 (94)
T ss_dssp -CCS-SCEEEECSSSHHHHHHHHHHHHHTCC-EEEETTGGGCC----
T ss_pred -CCC-CCEEEEcCCCChHHHHHHHHHHcCCc-EEEEcccHHHHHhCc
Confidence 367 99999999999999999999999998 999999999999875
No 17
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.80 E-value=9.9e-20 Score=180.16 Aligned_cols=121 Identities=17% Similarity=0.208 Sum_probs=104.7
Q ss_pred CCCcCHHHHHHHHhCCCCcEEEEcCChhhHhhCCCCCccccccccccccCcccccch---hHhhhcCchhhhhHHHHHHH
Q 008662 270 SGDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGS---VKKLLRGGRELDDTLTAAVI 346 (558)
Q Consensus 270 ~g~ISp~Ea~elL~~~~~avLIDVRs~~Ef~~GHIPGA~gai~~d~~nIPL~eL~~~---l~ell~~~~~L~~ll~aaGI 346 (558)
...|+++++.+++. +++.+|||||++.||..+|||||+ |+|+.++... ...++++++.+++.+.++|+
T Consensus 8 ~~~is~~~l~~~l~-~~~~~iiDvR~~~ey~~ghIpgA~--------~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~gi 78 (271)
T 1e0c_A 8 PLVIEPADLQARLS-APELILVDLTSAARYAEGHIPGAR--------FVDPKRTQLGQPPAPGLQPPREQLESLFGELGH 78 (271)
T ss_dssp CSEECHHHHHTTTT-CTTEEEEECSCHHHHHHCBSTTCE--------ECCGGGGSCCCTTCTTSCCCHHHHHHHHHHHTC
T ss_pred CceeeHHHHHHhcc-CCCeEEEEcCCcchhhhCcCCCCE--------ECCHHHhccCCCCCCCCCCCHHHHHHHHHHcCC
Confidence 34799999999885 467899999999999999999999 8888766542 33456677788888888877
Q ss_pred hhhcccCCCceEEEEeCCCc-hHHHHHHHHHHccCCCEEEecchHHHHHHcCCCeeccCc
Q 008662 347 RNLKIVQDRSKVIVMDADGT-RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 405 (558)
Q Consensus 347 ~~Lk~~~kdk~IVVyC~sG~-RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaAGLPV~~~~~ 405 (558)
+++++|||||++|. ||..+++.|+.+||++|++|+||+.+|+.+|+|++...+
T Consensus 79 ------~~~~~vvvyc~~g~~~s~~a~~~L~~~G~~~v~~L~GG~~~w~~~g~p~~~~~~ 132 (271)
T 1e0c_A 79 ------RPEAVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRPLSRELP 132 (271)
T ss_dssp ------CTTCEEEEECSSSSHHHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCCCC
T ss_pred ------CCCCeEEEEcCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHcCCCccCCCC
Confidence 68999999999998 999999999999999999999999999999999987544
No 18
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.80 E-value=2.6e-19 Score=177.14 Aligned_cols=115 Identities=15% Similarity=0.111 Sum_probs=98.1
Q ss_pred CcCHHHHHHHHhCCCCcEEEEcCChhhHh--------hCCCCCccccccccccccCcccccchhHhhhcCchhhhhHHHH
Q 008662 272 DLSPKSTLELLRGKENAVLIDVRHEDLRE--------RDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTA 343 (558)
Q Consensus 272 ~ISp~Ea~elL~~~~~avLIDVRs~~Ef~--------~GHIPGA~gai~~d~~nIPL~eL~~~l~ell~~~~~L~~ll~a 343 (558)
.|+++++.+++. +++.+|||||++.||. .||||||+ |+|+.++.+....+... +++.+.+.+
T Consensus 148 ~i~~~~l~~~l~-~~~~~liDvR~~~e~~g~~~~~~~~ghIpgA~--------~ip~~~~~~~~~~~~~~-~~l~~~~~~ 217 (271)
T 1e0c_A 148 TASRDYLLGRLG-AADLAIWDARSPQEYRGEKVLAAKGGHIPGAV--------NFEWTAAMDPSRALRIR-TDIAGRLEE 217 (271)
T ss_dssp BCCHHHHHHHTT-CTTEEEEECSCHHHHTTSSCCSSSCSBCTTCE--------ECCGGGGEEGGGTTEEC-TTHHHHHHH
T ss_pred cccHHHHHHHhc-CCCcEEEEcCChhhcCCccCCCCcCCcCCCce--------eccHHHhCCCCCCCCCH-HHHHHHHHH
Confidence 469999999885 4678999999999999 99999999 99998876543333333 667776766
Q ss_pred HHHhhhcccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHc-CCCeec
Q 008662 344 AVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKE-GLRIKE 402 (558)
Q Consensus 344 aGI~~Lk~~~kdk~IVVyC~sG~RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaA-GLPV~~ 402 (558)
+++ +++++||+||++|.||..+++.|+.+||++|++|+|||.+|.+. |+|+++
T Consensus 218 ~~~------~~~~~ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~~pv~~ 271 (271)
T 1e0c_A 218 LGI------TPDKEIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTPVEL 271 (271)
T ss_dssp TTC------CTTSEEEEECSSSSHHHHHHHHHHHTTCSCEEECSSHHHHHTTCTTCCCBC
T ss_pred cCC------CCCCCEEEECCchHHHHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCCCcC
Confidence 666 68999999999999999999999999999999999999999998 999863
No 19
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=99.79 E-value=7.2e-20 Score=160.74 Aligned_cols=116 Identities=17% Similarity=0.168 Sum_probs=87.0
Q ss_pred CcCHHHHHHHHhCCCCcEEEEcCChhhHhhCCCCCccccccccccccCcccccchhHhhhcCchhhhhHHHHHHHhhhcc
Q 008662 272 DLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKI 351 (558)
Q Consensus 272 ~ISp~Ea~elL~~~~~avLIDVRs~~Ef~~GHIPGA~gai~~d~~nIPL~eL~~~l~ell~~~~~L~~ll~aaGI~~Lk~ 351 (558)
.|+++|+.+++.+.++.+|||||++.||..||||||+ |+|+.++.....+++. .+.+.+... ..-..
T Consensus 2 ~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~--------~ip~~~~~~~~~~~~~---~~~~~l~~~--~~~~~ 68 (127)
T 3i2v_A 2 RVSVTDYKRLLDSGAFHLLLDVRPQVEVDICRLPHAL--------HIPLKHLERRDAESLK---LLKEAIWEE--KQGTQ 68 (127)
T ss_dssp EECHHHHHHHHHHTCCCEEEECSCHHHHHHCCCTTSE--------ECCHHHHHTTCHHHHH---HHHHHHHHH--HTTC-
T ss_pred CCCHHHHHHHHhCCCCeEEEECCCHHHhhheecCCce--------eCChHHHhhhhhhhHH---HHHHHHhhh--ccccc
Confidence 6899999999975556999999999999999999999 9999777654433210 111111110 00001
Q ss_pred cCCCceEEEEeCCCchHHHHHHHHHHc------cCCCEEEecchHHHHHHcCCCe
Q 008662 352 VQDRSKVIVMDADGTRSKGIARSLRKL------GVMRAFLVQGGFQSWVKEGLRI 400 (558)
Q Consensus 352 ~~kdk~IVVyC~sG~RS~~AA~~L~~~------Gf~nVy~LdGG~~aWkaAGLPV 400 (558)
.+++++||+||++|.||..+++.|+++ ||.+|++|+|||.+|+++..|.
T Consensus 69 ~~~~~~ivv~C~~G~rs~~a~~~L~~~gg~~~~G~~~v~~l~GG~~~W~~~~~~~ 123 (127)
T 3i2v_A 69 EGAAVPIYVICKLGNDSQKAVKILQSLSAAQELDPLTVRDVVGGLMAWAAKIDGT 123 (127)
T ss_dssp --CCEEEEEECSSSSHHHHHHHHHHHHHHTTSSSCEEEEEETTHHHHHHHHTCTT
T ss_pred CCCCCeEEEEcCCCCcHHHHHHHHHHhhccccCCCceEEEecCCHHHHHHhcCCC
Confidence 135679999999999999999999999 6889999999999999977653
No 20
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=99.79 E-value=1.4e-20 Score=163.89 Aligned_cols=99 Identities=19% Similarity=0.278 Sum_probs=84.1
Q ss_pred CcCHHHHHHHHhCCCCcEEEEcCChhhHhhCCCCCccccccccccccCcccccchhHhhhcCchhhhhHHHHHHHhhhcc
Q 008662 272 DLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKI 351 (558)
Q Consensus 272 ~ISp~Ea~elL~~~~~avLIDVRs~~Ef~~GHIPGA~gai~~d~~nIPL~eL~~~l~ell~~~~~L~~ll~aaGI~~Lk~ 351 (558)
.|+++++ +.++.+|||||++.||..||||||+ |+|+.++...+.+ .+
T Consensus 6 ~is~~el-----~~~~~~liDvR~~~e~~~ghIpgAi--------~ip~~~l~~~~~~--------------~~------ 52 (110)
T 2k0z_A 6 AISLEEV-----NFNDFIVVDVRELDEYEELHLPNAT--------LISVNDQEKLADF--------------LS------ 52 (110)
T ss_dssp EEETTTC-----CGGGSEEEEEECHHHHHHSBCTTEE--------EEETTCHHHHHHH--------------HH------
T ss_pred eeCHHHh-----ccCCeEEEECCCHHHHhcCcCCCCE--------EcCHHHHHHHHHh--------------cc------
Confidence 4666664 2357899999999999999999999 9999877654332 12
Q ss_pred cCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcCCCeeccC
Q 008662 352 VQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELK 404 (558)
Q Consensus 352 ~~kdk~IVVyC~sG~RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaAGLPV~~~~ 404 (558)
++++++||+||++|.||..+++.|+.+||++ ++|+||+.+|+++|+|++.+.
T Consensus 53 ~~~~~~ivvyC~~G~rs~~aa~~L~~~G~~~-~~l~GG~~~W~~~g~p~~~~~ 104 (110)
T 2k0z_A 53 QHKDKKVLLHCRAGRRALDAAKSMHELGYTP-YYLEGNVYDFEKYGFRMVYDD 104 (110)
T ss_dssp SCSSSCEEEECSSSHHHHHHHHHHHHTTCCC-EEEESCGGGTTTTTCCCBCCC
T ss_pred cCCCCEEEEEeCCCchHHHHHHHHHHCCCCE-EEecCCHHHHHHCCCcEecCC
Confidence 3689999999999999999999999999999 999999999999999998754
No 21
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=99.79 E-value=1e-19 Score=163.74 Aligned_cols=115 Identities=19% Similarity=0.192 Sum_probs=89.3
Q ss_pred CCCCcCHHHHHHHHhCCCCcEEEEcCChhhHhhCCC-------CCccccccccccccCcccccchhHhhhcCchhhhhHH
Q 008662 269 YSGDLSPKSTLELLRGKENAVLIDVRHEDLRERDGI-------PDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTL 341 (558)
Q Consensus 269 ~~g~ISp~Ea~elL~~~~~avLIDVRs~~Ef~~GHI-------PGA~gai~~d~~nIPL~eL~~~l~ell~~~~~L~~ll 341 (558)
..+.|+++++.+++.++++++|||||++.||+.+|+ |||+ |||+.++.. .. ++++ +
T Consensus 3 ~~~~is~~e~~~~l~~~~~~~liDVR~~~E~~~~~~~~~~g~~~ga~--------~ip~~~~~~--~~------~~~~-l 65 (134)
T 1vee_A 3 SGSSGSAKNAYTKLGTDDNAQLLDIRATADFRQVGSPNIKGLGKKAV--------STVYNGEDK--PG------FLKK-L 65 (134)
T ss_dssp CSCBCCHHHHHHHHHHCTTEEEEECSCHHHHHHTCEECCTTTSCCCE--------ECCCCGGGH--HH------HHHH-H
T ss_pred CCCccCHHHHHHHHHhCCCeEEEEcCCHHHHhhcCCCcccccCCceE--------EeecccccC--hh------HHHH-H
Confidence 446899999999986456789999999999987444 6888 899865421 00 1110 1
Q ss_pred HHHHHhhhcccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchH---HHHHHcCCCeeccCc
Q 008662 342 TAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGF---QSWVKEGLRIKELKS 405 (558)
Q Consensus 342 ~aaGI~~Lk~~~kdk~IVVyC~sG~RS~~AA~~L~~~Gf~nVy~LdGG~---~aWkaAGLPV~~~~~ 405 (558)
.+. ...+++++|||||++|.||..+++.|+++||++|++|.||| .+|+++|+|++....
T Consensus 66 ~~~-----~~~~~~~~ivv~C~sG~RS~~aa~~L~~~G~~~v~~l~GG~~~~~~W~~~g~p~~~~~~ 127 (134)
T 1vee_A 66 SLK-----FKDPENTTLYILDKFDGNSELVAELVALNGFKSAYAIKDGAEGPRGWLNSSLPWIEPKK 127 (134)
T ss_dssp HTT-----CSCGGGCEEEEECSSSTTHHHHHHHHHHHTCSEEEECTTTTTSTTSSGGGTCCEECCCC
T ss_pred HHH-----hCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCcceEEecCCccCCcchhhcCCCCCCCCC
Confidence 000 00157899999999999999999999999999999999999 789999999988544
No 22
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=99.79 E-value=8.4e-20 Score=166.68 Aligned_cols=117 Identities=29% Similarity=0.419 Sum_probs=88.3
Q ss_pred CCCCcCHHHHHHHHhCCCCcEEEEcCChhhHhh-CCC------CCccccccccccccCcccccchhHhhhcCchh---hh
Q 008662 269 YSGDLSPKSTLELLRGKENAVLIDVRHEDLRER-DGI------PDLRRGARFRYASVYLPEVGGSVKKLLRGGRE---LD 338 (558)
Q Consensus 269 ~~g~ISp~Ea~elL~~~~~avLIDVRs~~Ef~~-GHI------PGA~gai~~d~~nIPL~eL~~~l~ell~~~~~---L~ 338 (558)
|.+.|+++++.+++.++++.+|||||++.||.. ||| |||+ |+|+.++... ..+.+ +.
T Consensus 3 ~~~~is~~el~~~l~~~~~~~liDVR~~~e~~~~ghi~~~g~~pgAv--------~ip~~~~~~~-----~~~~~~~~l~ 69 (148)
T 2fsx_A 3 YAGDITPLQAWEMLSDNPRAVLVDVRCEAEWRFVGVPDLSSLGREVV--------YVEWATSDGT-----HNDNFLAELR 69 (148)
T ss_dssp CSEEECHHHHHHHHHHCTTCEEEECSCHHHHHHTCEECCGGGTCCCE--------ECCSBCTTSC-----BCTTHHHHHH
T ss_pred ccccCCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCCccccCCCCcE--------Eeeeeccccc-----cCHHHHHHHH
Confidence 456899999999986446899999999999997 999 9999 8898662110 01111 11
Q ss_pred hHHHHHHHhhhcccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchH------------HHHHHcCCCeeccC
Q 008662 339 DTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGF------------QSWVKEGLRIKELK 404 (558)
Q Consensus 339 ~ll~aaGI~~Lk~~~kdk~IVVyC~sG~RS~~AA~~L~~~Gf~nVy~LdGG~------------~aWkaAGLPV~~~~ 404 (558)
+.+.+.++ +++++|||||++|.||..+++.|+.+||++|++|+||| .+|+++|+|++...
T Consensus 70 ~~l~~~~~------~~~~~ivvyC~~G~rS~~aa~~L~~~G~~~v~~l~GG~~~w~~~~g~~~~~~W~~~glp~~~~~ 141 (148)
T 2fsx_A 70 DRIPADAD------QHERPVIFLCRSGNRSIGAAEVATEAGITPAYNVLDGFEGHLDAEGHRGATGWRAVGLPWRQGR 141 (148)
T ss_dssp HHCC-------------CCEEEECSSSSTHHHHHHHHHHTTCCSEEEETTTTTCCCCTTSCCCSSSTTTTTCSEECC-
T ss_pred HHHhhccC------CCCCEEEEEcCCChhHHHHHHHHHHcCCcceEEEcCChhhhhhhccccccccHHHcCCCCCccc
Confidence 11222233 67899999999999999999999999999999999999 79999999998754
No 23
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.77 E-value=3e-19 Score=177.76 Aligned_cols=120 Identities=16% Similarity=0.210 Sum_probs=102.4
Q ss_pred CCcCHHHHHHHHhCCCCcEEEEcC----------ChhhHhhCCCCCccccccccccccCcccccch---hHhhhcCchhh
Q 008662 271 GDLSPKSTLELLRGKENAVLIDVR----------HEDLRERDGIPDLRRGARFRYASVYLPEVGGS---VKKLLRGGREL 337 (558)
Q Consensus 271 g~ISp~Ea~elL~~~~~avLIDVR----------s~~Ef~~GHIPGA~gai~~d~~nIPL~eL~~~---l~ell~~~~~L 337 (558)
..|+++++.+++. +++.+||||| ++.||..||||||+ |+|+.++... ...++++++.+
T Consensus 4 ~~is~~~l~~~l~-~~~~~iiDvR~~~~~~~~~~~~~e~~~ghIpgAi--------~ip~~~l~~~~~~~~~~~~~~~~~ 74 (280)
T 1urh_A 4 WFVGADWLAEHID-DPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAV--------FFDIEALSDHTSPLPHMLPRPETF 74 (280)
T ss_dssp CEECHHHHHTTTT-CTTEEEEECCCCCSSCTTCCHHHHHHHSBCTTCE--------ECCGGGGSCSSSSSSSCCCCHHHH
T ss_pred ceeeHHHHHHhcC-CCCeEEEEeeccCCcccccchhhhhhhCcCCCCE--------ECCHHHhcCCCCCCCCCCCCHHHH
Confidence 4689999999885 4689999999 78999999999999 8888765432 22355666778
Q ss_pred hhHHHHHHHhhhcccCCCceEEEEeCCCch-HHHHHHHHHHccCCCEEEecchHHHHHHcCCCeeccCc
Q 008662 338 DDTLTAAVIRNLKIVQDRSKVIVMDADGTR-SKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 405 (558)
Q Consensus 338 ~~ll~aaGI~~Lk~~~kdk~IVVyC~sG~R-S~~AA~~L~~~Gf~nVy~LdGG~~aWkaAGLPV~~~~~ 405 (558)
++.+.++|+ +++++|||||++|.| |..+++.|+.+||++|++|+||+.+|+++|+|++...+
T Consensus 75 ~~~~~~~gi------~~~~~ivvyc~~g~~~a~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 137 (280)
T 1urh_A 75 AVAMRELGV------NQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGAV 137 (280)
T ss_dssp HHHHHHTTC------CTTSEEEEECSSSCSSHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBBSCC
T ss_pred HHHHHHcCC------CCCCeEEEECCCCCccHHHHHHHHHHcCCCCEEEecCCHHHHHHCCCcccCCCC
Confidence 888888777 689999999999998 99999999999999999999999999999999988544
No 24
>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1
Probab=99.77 E-value=1.4e-19 Score=166.82 Aligned_cols=108 Identities=21% Similarity=0.349 Sum_probs=91.3
Q ss_pred CCcCHHHHHHHHhCCCCcEEEEcCChhhHhhCCCCCccccccccccccCcccccchhHhhhcCchhhhhHHHHHHHhhhc
Q 008662 271 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 350 (558)
Q Consensus 271 g~ISp~Ea~elL~~~~~avLIDVRs~~Ef~~GHIPGA~gai~~d~~nIPL~eL~~~l~ell~~~~~L~~ll~aaGI~~Lk 350 (558)
..|+++++.++++ +++.+|||||+++||..||||||+ |+|+.++...+.+++.
T Consensus 28 ~~Is~~el~~~l~-~~~~~lIDvR~~~ey~~ghIpgAi--------nip~~~l~~~~~~l~~------------------ 80 (152)
T 1t3k_A 28 SYITSTQLLPLHR-RPNIAIIDVRDEERNYDGHIAGSL--------HYASGSFDDKISHLVQ------------------ 80 (152)
T ss_dssp EEECTTTTTTCCC-CTTEEEEEESCSHHHHSSCCCSSE--------EECCSSSSTTHHHHHH------------------
T ss_pred ceECHHHHHHHhc-CCCEEEEECCChhhccCccCCCCE--------ECCHHHHHHHHHHHHH------------------
Confidence 5789999988874 467899999999999999999999 9999887765544321
Q ss_pred ccCCCceEEEEeC-CCchHHHHHHHHHH--------ccCCCEEEecchHHHHHHcCCCeeccCc
Q 008662 351 IVQDRSKVIVMDA-DGTRSKGIARSLRK--------LGVMRAFLVQGGFQSWVKEGLRIKELKS 405 (558)
Q Consensus 351 ~~~kdk~IVVyC~-sG~RS~~AA~~L~~--------~Gf~nVy~LdGG~~aWkaAGLPV~~~~~ 405 (558)
..+++++|||||+ +|.|+..+++.|.+ +||++|++|+|||.+|+++|+|++...+
T Consensus 81 ~~~~~~~iVvyC~~~G~rs~~aa~~L~~~l~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~ 144 (152)
T 1t3k_A 81 NVKDKDTLVFHSALSQVRGPTCARRLVNYLDEKKEDTGIKNIMILERGFNGWEASGKPVCRCAE 144 (152)
T ss_dssp TCCSCCEEEESSSCCSSSHHHHHHHHHHHHHHSSSCCCSSEEEEESSTTHHHHHHSCSSCCCSC
T ss_pred hcCCCCEEEEEcCCCCcchHHHHHHHHHHHHHHHHhcCCCcEEEEcCCHHHHHHcCCccccCCC
Confidence 1367899999999 99999999998854 8999999999999999999999987544
No 25
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.77 E-value=4.9e-19 Score=181.18 Aligned_cols=119 Identities=10% Similarity=0.129 Sum_probs=101.7
Q ss_pred CCcCHHHHHHHHhCCCCcEEEEcCChhh-HhhCCCCCccccccccccccCcc-cccchhHhhhcCchhhhhHHHHHHHhh
Q 008662 271 GDLSPKSTLELLRGKENAVLIDVRHEDL-RERDGIPDLRRGARFRYASVYLP-EVGGSVKKLLRGGRELDDTLTAAVIRN 348 (558)
Q Consensus 271 g~ISp~Ea~elL~~~~~avLIDVRs~~E-f~~GHIPGA~gai~~d~~nIPL~-eL~~~l~ell~~~~~L~~ll~aaGI~~ 348 (558)
..|+++++.+++. +++.+|||||++.| |..||||||+ |+|+. .+......++++++.+++.+.++|+
T Consensus 40 ~~is~~~l~~~l~-~~~~~iiDvR~~~e~y~~gHIpGAi--------~ip~~~~~~~~~~~~~~~~~~~~~~l~~lgi-- 108 (318)
T 3hzu_A 40 RLVTADWLSAHMG-APGLAIVESDEDVLLYDVGHIPGAV--------KIDWHTDLNDPRVRDYINGEQFAELMDRKGI-- 108 (318)
T ss_dssp GEECHHHHHHHTT-CTTEEEEECCSSTTSGGGCBCTTEE--------ECCHHHHHBCSSSSSBCCHHHHHHHHHHTTC--
T ss_pred ceecHHHHHHhcc-CCCEEEEECCCChhHHhcCcCCCCe--------EeCchhhhccCcccCCCCHHHHHHHHHHcCC--
Confidence 3599999999985 46799999999877 9999999999 88864 2333333456667788888888887
Q ss_pred hcccCCCceEEEEeCCCc-hHHHHHHHHHHccCCCEEEecchHHHHHHcCCCeeccC
Q 008662 349 LKIVQDRSKVIVMDADGT-RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELK 404 (558)
Q Consensus 349 Lk~~~kdk~IVVyC~sG~-RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaAGLPV~~~~ 404 (558)
+++++|||||++|. ||..+++.|+.+||++|++|+||+.+|+++|+|++...
T Consensus 109 ----~~~~~vVvyc~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~ 161 (318)
T 3hzu_A 109 ----ARDDTVVIYGDKSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRETTLDV 161 (318)
T ss_dssp ----CTTCEEEEECSGGGHHHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBCCC
T ss_pred ----CCCCeEEEECCCCCccHHHHHHHHHHcCCCceEEccCCHHHHhhcCCCcccCC
Confidence 68999999999988 99999999999999999999999999999999998753
No 26
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.77 E-value=3e-19 Score=177.75 Aligned_cols=114 Identities=21% Similarity=0.235 Sum_probs=87.2
Q ss_pred CcCHHHHHHHHhCCCCcEEEEcCChhhH-----------hhCCCCCccccccccccccCcccccchhHhhhcCchhhhhH
Q 008662 272 DLSPKSTLELLRGKENAVLIDVRHEDLR-----------ERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDT 340 (558)
Q Consensus 272 ~ISp~Ea~elL~~~~~avLIDVRs~~Ef-----------~~GHIPGA~gai~~d~~nIPL~eL~~~l~ell~~~~~L~~l 340 (558)
.|+++++.+++.+ ++.+|||||++.|| ..||||||+ |+|+.++.. ...+++++++.+.
T Consensus 153 ~i~~~e~~~~~~~-~~~~liDvR~~~e~~G~~~~~~~~~~~ghIpgA~--------nip~~~~~~--~~~~~~~~~l~~~ 221 (280)
T 1urh_A 153 VVKVTDVLLASHE-NTAQIIDARPAARFNAEVDEPRPGLRRGHIPGAL--------NVPWTELVR--EGELKTTDELDAI 221 (280)
T ss_dssp BCCHHHHHHHHHH-TCSEEEECSCHHHHSSCCCC----CCSSSCTTCE--------ECCGGGGBS--SSSBCCHHHHHHH
T ss_pred EEcHHHHHHHhcC-CCcEEEeCCchhhcccccCCCCCCCcCccCCCce--------EeeHHHhhc--CCccCCHHHHHHH
Confidence 3899999999863 57899999999999 689999999 999987765 1223444555555
Q ss_pred HHHHHHhhhcccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHH-cCCCeec
Q 008662 341 LTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVK-EGLRIKE 402 (558)
Q Consensus 341 l~aaGI~~Lk~~~kdk~IVVyC~sG~RS~~AA~~L~~~Gf~nVy~LdGG~~aWka-AGLPV~~ 402 (558)
+.+.++ +++++||+||++|.||..++..|+.+||++|++|+|||.+|.+ .++|++.
T Consensus 222 ~~~~~~------~~~~~ivv~C~~G~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~Pv~~ 278 (280)
T 1urh_A 222 FFGRGV------SYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVEP 278 (280)
T ss_dssp HHTTTC------CSSSCEEEECCSSSTHHHHHHHHHHTTCSSCEEECCSCCC-----------
T ss_pred HHHcCC------CCCCCEEEECChHHHHHHHHHHHHHcCCCCceeeCChHHHHhcCCCCCcee
Confidence 555454 6899999999999999999999999999999999999999987 5999875
No 27
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.76 E-value=9.6e-19 Score=176.17 Aligned_cols=122 Identities=20% Similarity=0.310 Sum_probs=103.5
Q ss_pred CCCCcCHHHHHHHHhCC---CCcEEEEcC--------ChhhHhhCCCCCccccccccccccCcccccch---hHhhhcCc
Q 008662 269 YSGDLSPKSTLELLRGK---ENAVLIDVR--------HEDLRERDGIPDLRRGARFRYASVYLPEVGGS---VKKLLRGG 334 (558)
Q Consensus 269 ~~g~ISp~Ea~elL~~~---~~avLIDVR--------s~~Ef~~GHIPGA~gai~~d~~nIPL~eL~~~---l~ell~~~ 334 (558)
|...|+++++.+++.+. ++.+||||| ++.||..||||||+ |+|+.++... ...+++++
T Consensus 6 ~~~~is~~~l~~~l~~~~~~~~~~liDvR~~~~~~~~~~~ey~~gHIpGAi--------~ip~~~l~~~~~~~~~~lp~~ 77 (296)
T 1rhs_A 6 YRALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEYLERHVPGAS--------FFDIEECRDKASPYEVMLPSE 77 (296)
T ss_dssp CCSEECHHHHHHHHHTTCCBTTEEEEECCCCCTTSCCHHHHHHHSBCTTCE--------ECCTTTSSCTTSSSSSCCCCH
T ss_pred cCceeeHHHHHHHHhccccCCCeEEEEecccCcCCcchhhhHhhCcCCCCE--------EeCHHHhcCCCCCCCCCCCCH
Confidence 34579999999999642 578999999 68999999999998 8888766543 23456677
Q ss_pred hhhhhHHHHHHHhhhcccCCCceEEEEeCC--Cch-HHHHHHHHHHccCCCEEEecchHHHHHHcCCCeeccC
Q 008662 335 RELDDTLTAAVIRNLKIVQDRSKVIVMDAD--GTR-SKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELK 404 (558)
Q Consensus 335 ~~L~~ll~aaGI~~Lk~~~kdk~IVVyC~s--G~R-S~~AA~~L~~~Gf~nVy~LdGG~~aWkaAGLPV~~~~ 404 (558)
+.+++.+.++|+ +++++|||||++ |.+ +..+++.|+.+||++|++|+||+.+|+++|+|++...
T Consensus 78 ~~~~~~l~~lgi------~~~~~vVvyc~~~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~ 144 (296)
T 1rhs_A 78 AGFADYVGSLGI------SNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEP 144 (296)
T ss_dssp HHHHHHHHHTTC------CTTCEEEEECCCSSSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCSC
T ss_pred HHHHHHHHHcCC------CCCCeEEEEcCCCCCcchHHHHHHHHHHcCCCcEEEcCCCHHHHHHcCCccccCC
Confidence 788888887777 689999999999 876 8899999999999999999999999999999998753
No 28
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.75 E-value=4.4e-18 Score=169.53 Aligned_cols=116 Identities=18% Similarity=0.194 Sum_probs=96.5
Q ss_pred cCHHHHHHHHhC--CCCcEEEEcCChhhHh----------------hCCCCCccccccccccccCcccccchhHhhhcCc
Q 008662 273 LSPKSTLELLRG--KENAVLIDVRHEDLRE----------------RDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGG 334 (558)
Q Consensus 273 ISp~Ea~elL~~--~~~avLIDVRs~~Ef~----------------~GHIPGA~gai~~d~~nIPL~eL~~~l~ell~~~ 334 (558)
|+++++.++++. ..+..|||||++.||. .||||||+ |+|+.++.+.. ..++++
T Consensus 148 i~~~el~~~l~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~~~~~~ghIpgA~--------~ip~~~~~~~~-~~~~~~ 218 (285)
T 1uar_A 148 AYRDDVLEHIIKVKEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAK--------NIPWAKAVNPD-GTFKSA 218 (285)
T ss_dssp ECHHHHHHHHHHHHTTSEEEEECSCHHHHHTCC--------CCCSCCSBCTTCE--------ECCGGGGBCTT-SCBCCH
T ss_pred EcHHHHHHHHhhcccCCCcEEEcCCccceeeeccccccccccccccCCcCCCcc--------ccCHHHhcCCC-CcCCCH
Confidence 899999998830 1245799999999997 79999999 99987765432 235566
Q ss_pred hhhhhHHHHHHHhhhcccCCCceEEEEeCCCchHHHHHHHHH-HccCCCEEEecchHHHHH-HcCCCeecc
Q 008662 335 RELDDTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLR-KLGVMRAFLVQGGFQSWV-KEGLRIKEL 403 (558)
Q Consensus 335 ~~L~~ll~aaGI~~Lk~~~kdk~IVVyC~sG~RS~~AA~~L~-~~Gf~nVy~LdGG~~aWk-aAGLPV~~~ 403 (558)
+++.+.+.++|+ +++++|||||++|.||..+++.|+ .+||++|++|+|||.+|. .+|+|++++
T Consensus 219 ~~l~~~~~~~g~------~~~~~ivvyC~~G~rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~g~pv~~g 283 (285)
T 1uar_A 219 EELRALYEPLGI------TKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWTEWGNLVGVPIAKG 283 (285)
T ss_dssp HHHHHHHGGGTC------CTTSEEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCBCS
T ss_pred HHHHHHHHHcCC------CCCCCEEEECCchHHHHHHHHHHHHHcCCCCcceeCchHHHHhcCCCCCcccC
Confidence 667666666665 689999999999999999999999 999999999999999998 799999874
No 29
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.75 E-value=1.1e-18 Score=173.06 Aligned_cols=119 Identities=16% Similarity=0.200 Sum_probs=98.5
Q ss_pred CcCHHHHHHHHhCCCCcEEEEcCC-hhhHhhCCCCCccccccccccccCcccc-cchhHhhhcCchhhhhHHHHHHHhhh
Q 008662 272 DLSPKSTLELLRGKENAVLIDVRH-EDLRERDGIPDLRRGARFRYASVYLPEV-GGSVKKLLRGGRELDDTLTAAVIRNL 349 (558)
Q Consensus 272 ~ISp~Ea~elL~~~~~avLIDVRs-~~Ef~~GHIPGA~gai~~d~~nIPL~eL-~~~l~ell~~~~~L~~ll~aaGI~~L 349 (558)
.|+++++.+++. +++.+|||||+ +.||..||||||+ |+|+..+ .......+++++.+++.+..+|+
T Consensus 7 ~is~~~l~~~l~-~~~~~liDvR~~~~ey~~ghIpgA~--------~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi--- 74 (277)
T 3aay_A 7 LVSADWAESNLH-APKVVFVEVDEDTSAYDRDHIAGAI--------KLDWRTDLQDPVKRDFVDAQQFSKLLSERGI--- 74 (277)
T ss_dssp EECHHHHHTTTT-CTTEEEEEEESSSHHHHHCBSTTCE--------EEETTTTTBCSSSSSBCCHHHHHHHHHHHTC---
T ss_pred eEcHHHHHHHhC-CCCEEEEEcCCChhhHhhCCCCCcE--------EecccccccCCCCCCCCCHHHHHHHHHHcCC---
Confidence 589999999885 45789999998 8999999999998 8887543 22222344555667777777777
Q ss_pred cccCCCceEEEEeCCCc-hHHHHHHHHHHccCCCEEEecchHHHHHHcCCCeeccCc
Q 008662 350 KIVQDRSKVIVMDADGT-RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 405 (558)
Q Consensus 350 k~~~kdk~IVVyC~sG~-RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaAGLPV~~~~~ 405 (558)
+++++|||||++|. +|..+++.|+.+||++|++|+||+.+|+++|+|++...+
T Consensus 75 ---~~~~~vvvyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 128 (277)
T 3aay_A 75 ---ANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDGRPLSSDPV 128 (277)
T ss_dssp ---CTTSEEEEECSGGGHHHHHHHHHHHHTTCCSEEEETTHHHHHHHTTCCCBCCCC
T ss_pred ---CCCCeEEEECCCCCchHHHHHHHHHHcCCCcEEEecCCHHHHHHcCCccccCCC
Confidence 68999999999976 799999999999999999999999999999999987543
No 30
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=99.75 E-value=1.4e-18 Score=153.25 Aligned_cols=109 Identities=20% Similarity=0.308 Sum_probs=79.1
Q ss_pred CCcCHHHHHHHHhCCCCcEEEEcCChhhHhhCCCCCccccccccccccCcccccchhH--hhhc--------------Cc
Q 008662 271 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVK--KLLR--------------GG 334 (558)
Q Consensus 271 g~ISp~Ea~elL~~~~~avLIDVRs~~Ef~~GHIPGA~gai~~d~~nIPL~eL~~~l~--ell~--------------~~ 334 (558)
..|+++++.+ .++.+|||||++.||..||||||+ |+|+.++..... .+.. ..
T Consensus 5 ~~i~~~el~~----~~~~~iiDvR~~~e~~~ghIpgA~--------nip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (134)
T 3g5j_A 5 SVIKIEKALK----LDKVIFVDVRTEGEYEEDHILNAI--------NMPLFKNNEHNEVGTIYKMQGKHEAIQKGFDYVS 72 (134)
T ss_dssp CEECHHHHTT----CTTEEEEECSCHHHHHHCCCTTCE--------ECCSSCHHHHHHHHHHHHHHCHHHHHHHHHHHHG
T ss_pred cccCHHHHHh----cCCcEEEEcCCHHHHhcCCCCCCE--------EcCccchhhhhcccceeeecChhHHHhccccccc
Confidence 4688888654 468999999999999999999999 999865432110 0000 00
Q ss_pred hhhhhHHHHHHHhhhcccCCC-ceEEEEe-CCCchHHHHHHHHHHccCCCEEEecchHHHHHHcC
Q 008662 335 RELDDTLTAAVIRNLKIVQDR-SKVIVMD-ADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEG 397 (558)
Q Consensus 335 ~~L~~ll~aaGI~~Lk~~~kd-k~IVVyC-~sG~RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaAG 397 (558)
..+.++...+ ..++++ ++||+|| ++|.||..+++.|+.+|| +|++|+|||.+|++..
T Consensus 73 ~~~~~~~~~~-----~~~~~~~~~ivvyC~~~G~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~~ 131 (134)
T 3g5j_A 73 YKLKDIYLQA-----AELALNYDNIVIYCARGGMRSGSIVNLLSSLGV-NVYQLEGGYKAYRNFV 131 (134)
T ss_dssp GGHHHHHHHH-----HHHHTTCSEEEEECSSSSHHHHHHHHHHHHTTC-CCEEETTHHHHHHHHH
T ss_pred ccHHHHHHHH-----HHhccCCCeEEEEECCCChHHHHHHHHHHHcCC-ceEEEeCcHHHHHHHh
Confidence 0111111111 112567 9999999 589999999999999999 9999999999999753
No 31
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.75 E-value=4.7e-18 Score=179.74 Aligned_cols=158 Identities=17% Similarity=0.213 Sum_probs=124.0
Q ss_pred HHHHHHHhcCCCCCCCcchhhhhhhhHHHHHHHHHHHHhCCCC----------------------CCcCHHHHHHHHhC-
Q 008662 228 AIEGLERSLGFDPNDPIVPFVVFLGTSATLWIFYWWWTYGGYS----------------------GDLSPKSTLELLRG- 284 (558)
Q Consensus 228 g~~gvdkrigf~~~~PVla~aI~~g~t~~L~l~y~~~~~~G~~----------------------g~ISp~Ea~elL~~- 284 (558)
.|+.....+|+.++++|+++. ... ...-+||.++..|+. ..++++++.+++..
T Consensus 63 ~f~~~~~~lgi~~~~~vVvy~---~~~-~a~r~~w~l~~~G~~~V~vl~Gg~~~~g~~~~~~~~~~~i~~~~l~~~~~~~ 138 (423)
T 2wlr_A 63 QLNAWIKQHNLKTDAPVALYG---NDK-DVDAVKTRLQKAGLTHISILSDALSEPSRLQKLPHFEQLVYPQWLHDLQQGK 138 (423)
T ss_dssp HHHHHHHHTTCCTTSCEEEES---CHH-HHHHHHHHHHHTTCCCEEEBTTTTSCGGGCBCCTTGGGEECHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCCCCeEEEEC---CCC-CHHHHHHHHHHcCCceeEeccchhhcCCCcccCCCCCcccCHHHHHHHhhcc
Confidence 345566778999999997542 221 222245555543331 24788888888853
Q ss_pred ------CCCcEEEEcC--ChhhHhhCCCCCccccccccccccCcccccchhHhhhcCchhhhhHHHHHHHhhhcccCCCc
Q 008662 285 ------KENAVLIDVR--HEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKIVQDRS 356 (558)
Q Consensus 285 ------~~~avLIDVR--s~~Ef~~GHIPGA~gai~~d~~nIPL~eL~~~l~ell~~~~~L~~ll~aaGI~~Lk~~~kdk 356 (558)
.++.+|||+| ++.||+.||||||+ |+|+.++.......+++++++.+.+.++|+ ++++
T Consensus 139 ~~~~~~~~~~~liDvR~~~~~e~~~ghIpgA~--------nip~~~~~~~~~~~~~~~~~l~~~~~~~gi------~~~~ 204 (423)
T 2wlr_A 139 EVTAKPAGDWKVIEAAWGAPKLYLISHIPGAD--------YIDTNEVESEPLWNKVSDEQLKAMLAKHGI------RHDT 204 (423)
T ss_dssp CCTTCCSSCEEEEEEESSSCSHHHHCBCTTCE--------EEEGGGTEETTTTEECCHHHHHHHHHHTTC------CTTS
T ss_pred ccccccCCCeEEEEecCCCchhhccCcCCCcE--------EcCHHHhccCCCCCCCCHHHHHHHHHHcCC------CCCC
Confidence 2468999999 99999999999999 999887754333466777888888887777 6899
Q ss_pred eEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcCCCeecc
Q 008662 357 KVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKEL 403 (558)
Q Consensus 357 ~IVVyC~sG~RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaAGLPV~~~ 403 (558)
+||+||++|.||..+++.|+.+||++|++|+|||.+|..+|+|++++
T Consensus 205 ~ivvyC~~G~~a~~~~~~L~~~G~~~v~~l~Gg~~~W~~~g~pv~~g 251 (423)
T 2wlr_A 205 TVILYGRDVYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVERG 251 (423)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHTCSCEEEETTTHHHHHHTTCCCBCS
T ss_pred eEEEECCCchHHHHHHHHHHHcCCCCeEEECCCHHHHhhCCCCcccC
Confidence 99999999999999999999999999999999999999999999874
No 32
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.75 E-value=1.1e-18 Score=177.06 Aligned_cols=113 Identities=12% Similarity=0.110 Sum_probs=97.4
Q ss_pred CcCHHHHHHHHhCCCCcEEEEcCChhhH-----------hhCCCCCccccccccccccCcccccchhHhhhcCchhhhhH
Q 008662 272 DLSPKSTLELLRGKENAVLIDVRHEDLR-----------ERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDT 340 (558)
Q Consensus 272 ~ISp~Ea~elL~~~~~avLIDVRs~~Ef-----------~~GHIPGA~gai~~d~~nIPL~eL~~~l~ell~~~~~L~~l 340 (558)
.++++++.+++. +++.+|||||++.|| +.||||||+ |+|+.++.+... .+++++++.+.
T Consensus 176 ~i~~~e~~~~~~-~~~~~liDvR~~~ef~G~~~~p~~~~~~GhIpGAi--------niP~~~l~~~~~-~~~~~~~l~~~ 245 (302)
T 3olh_A 176 IKTYEDIKENLE-SRRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGTV--------NIPFTDFLSQEG-LEKSPEEIRHL 245 (302)
T ss_dssp EECHHHHHHHHH-HCCSEEEECSCHHHHHTSSCCSSTTCCCCCCTTCE--------ECCGGGGBCSSS-CBCCHHHHHHH
T ss_pred eecHHHHHHhhc-CCCcEEEecCCHHHccccccCCCcCCcCccCCCce--------ecCHHHhcCCCC-ccCCHHHHHHH
Confidence 367899988885 367899999999999 789999999 999987765432 34667777777
Q ss_pred HHHHHHhhhcccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcCCCe
Q 008662 341 LTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRI 400 (558)
Q Consensus 341 l~aaGI~~Lk~~~kdk~IVVyC~sG~RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaAGLPV 400 (558)
+.+.++ +++++||+||++|.||..++..|+.+||++|++|+|||.+|.++|+|.
T Consensus 246 ~~~~~~------~~~~~iv~yC~sG~rs~~a~~~L~~~G~~~v~~~~Gg~~~W~~~~~P~ 299 (302)
T 3olh_A 246 FQEKKV------DLSKPLVATCGSGVTACHVALGAYLCGKPDVPIYDGSWVEWYMRARPE 299 (302)
T ss_dssp HHHTTC------CTTSCEEEECSSSSTTHHHHHHHHTTTCCCCCEESSHHHHHHHHHCCC
T ss_pred HHhcCC------CCCCCEEEECCChHHHHHHHHHHHHcCCCCeeEeCCcHHHHhhccCCC
Confidence 777666 689999999999999999999999999999999999999999999874
No 33
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.74 E-value=8.3e-19 Score=174.77 Aligned_cols=118 Identities=17% Similarity=0.189 Sum_probs=98.6
Q ss_pred CcCHHHHHHHHhCCCCcEEEEcC-ChhhHhhCCCCCccccccccccccCccc-ccchhHhhhcCchhhhhHHHHHHHhhh
Q 008662 272 DLSPKSTLELLRGKENAVLIDVR-HEDLRERDGIPDLRRGARFRYASVYLPE-VGGSVKKLLRGGRELDDTLTAAVIRNL 349 (558)
Q Consensus 272 ~ISp~Ea~elL~~~~~avLIDVR-s~~Ef~~GHIPGA~gai~~d~~nIPL~e-L~~~l~ell~~~~~L~~ll~aaGI~~L 349 (558)
.|+++++.+++. +++.+||||| ++.||..||||||+ |+|+.. +.......+++++.+.+.+..+|+
T Consensus 9 ~is~~~l~~~l~-~~~~~liDvR~~~~e~~~ghIpgA~--------~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi--- 76 (285)
T 1uar_A 9 LVSTDWVQEHLE-DPKVRVLEVDEDILLYDTGHIPGAQ--------KIDWQRDFWDPVVRDFISEEEFAKLMERLGI--- 76 (285)
T ss_dssp EECHHHHHTTTT-CTTEEEEEECSSTTHHHHCBCTTCE--------EECHHHHHBCSSSSSBCCHHHHHHHHHHTTC---
T ss_pred eEcHHHHHHhcC-CCCEEEEEcCCCcchhhcCcCCCCE--------ECCchhhccCCcccCCCCHHHHHHHHHHcCC---
Confidence 689999999885 4578999999 78999999999999 888753 322223345555667777777666
Q ss_pred cccCCCceEEEEeCCCc-hHHHHHHHHHHccCCCEEEecchHHHHHHcCCCeeccC
Q 008662 350 KIVQDRSKVIVMDADGT-RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELK 404 (558)
Q Consensus 350 k~~~kdk~IVVyC~sG~-RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaAGLPV~~~~ 404 (558)
+++++|||||++|. +|..+++.|+.+||++|++|+||+.+|+++|+|++...
T Consensus 77 ---~~~~~ivvyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~ 129 (285)
T 1uar_A 77 ---SNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEEGRPLTTEV 129 (285)
T ss_dssp ---CTTCEEEEECHHHHHHHHHHHHHHHHTTCSCEEEETTHHHHHHHHTCCCBCCC
T ss_pred ---CCCCeEEEECCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCcccCCC
Confidence 68999999999998 79999999999999999999999999999999998743
No 34
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=99.74 E-value=1.1e-18 Score=144.80 Aligned_cols=83 Identities=19% Similarity=0.225 Sum_probs=70.7
Q ss_pred CcEEEEcCChhhHhhCCCCCccccccccccccCcccccchhHhhhcCchhhhhHHHHHHHhhhcccCCCceEEEEeCCCc
Q 008662 287 NAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKIVQDRSKVIVMDADGT 366 (558)
Q Consensus 287 ~avLIDVRs~~Ef~~GHIPGA~gai~~d~~nIPL~eL~~~l~ell~~~~~L~~ll~aaGI~~Lk~~~kdk~IVVyC~sG~ 366 (558)
+++|||||++.||..+|||||+ |+|+.++...+.++ + .+++++||+||++|.
T Consensus 1 ~~~liDvR~~~e~~~ghIpgA~--------~ip~~~l~~~~~~l--------------~------~~~~~~ivv~C~~g~ 52 (85)
T 2jtq_A 1 AEHWIDVRVPEQYQQEHVQGAI--------NIPLKEVKERIATA--------------V------PDKNDTVKVYCNAGR 52 (85)
T ss_dssp CEEEEECSCHHHHTTEEETTCE--------ECCHHHHHHHHHHH--------------C------CCTTSEEEEEESSSH
T ss_pred CCEEEECCCHHHHHhCCCCCCE--------EcCHHHHHHHHHHh--------------C------CCCCCcEEEEcCCCc
Confidence 4689999999999999999999 99987766544332 1 267899999999999
Q ss_pred hHHHHHHHHHHccCCCEEEecchHHHHHHcCCCee
Q 008662 367 RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIK 401 (558)
Q Consensus 367 RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaAGLPV~ 401 (558)
||..+++.|+++||++|+++ |||.+|. .|++
T Consensus 53 rs~~aa~~L~~~G~~~v~~l-GG~~~w~---~~~~ 83 (85)
T 2jtq_A 53 QSGQAKEILSEMGYTHVENA-GGLKDIA---MPKV 83 (85)
T ss_dssp HHHHHHHHHHHTTCSSEEEE-EETTTCC---SCEE
T ss_pred hHHHHHHHHHHcCCCCEEec-cCHHHHh---cccc
Confidence 99999999999999999999 9998884 4554
No 35
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.74 E-value=2.4e-18 Score=173.27 Aligned_cols=117 Identities=15% Similarity=0.095 Sum_probs=97.8
Q ss_pred CcCHHHHHHHHhCCCCcEEEEcCChhhH------------hhCCCCCccccccccccccCcccccchhHhhhcCchhhhh
Q 008662 272 DLSPKSTLELLRGKENAVLIDVRHEDLR------------ERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDD 339 (558)
Q Consensus 272 ~ISp~Ea~elL~~~~~avLIDVRs~~Ef------------~~GHIPGA~gai~~d~~nIPL~eL~~~l~ell~~~~~L~~ 339 (558)
.|+++++.+++. +++.+|||||++.|| +.||||||+ |+|+.++.... ..+++++++.+
T Consensus 161 ~i~~~e~~~~~~-~~~~~liDvR~~~e~~G~~~~~~~~~~~~ghIpgA~--------nip~~~l~~~~-~~~~~~~~l~~ 230 (296)
T 1rhs_A 161 LKTYEQVLENLE-SKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSV--------NMPFMNFLTED-GFEKSPEELRA 230 (296)
T ss_dssp EECHHHHHHHHH-HCCSEEEECSCHHHHHTSSCCSSSSSCCCCEETTCE--------ECCGGGGBCTT-SCBCCHHHHHH
T ss_pred EEcHHHHHHHhc-CCCceEEeCCchhhcccccCCcccCCCcCccCCCCE--------eecHHHhcCCC-CcCCCHHHHHH
Confidence 578999999885 357899999999999 789999999 99998775432 12344555666
Q ss_pred HHHHHHHhhhcccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHH-cCCCeeccC
Q 008662 340 TLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVK-EGLRIKELK 404 (558)
Q Consensus 340 ll~aaGI~~Lk~~~kdk~IVVyC~sG~RS~~AA~~L~~~Gf~nVy~LdGG~~aWka-AGLPV~~~~ 404 (558)
.+...++ +++++||+||++|.||..++..|+.+||++|++|+|||.+|.. .++|++...
T Consensus 231 ~~~~~~~------~~~~~ivv~C~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~pv~~~~ 290 (296)
T 1rhs_A 231 MFEAKKV------DLTKPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHRAPPETWVSQ 290 (296)
T ss_dssp HHHHTTC------CTTSCEEEECSSSSTHHHHHHHHHHTTCCCCEEESSHHHHHHHHSCGGGEEBT
T ss_pred HHHHcCC------CCCCCEEEECCcHHHHHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCCcccCC
Confidence 5655554 6899999999999999999999999999999999999999998 899998754
No 36
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.73 E-value=7.1e-18 Score=171.22 Aligned_cols=121 Identities=18% Similarity=0.278 Sum_probs=100.3
Q ss_pred CCCcCHHHHHHHHhCC---CCcEEEEcC---------ChhhHhhCCCCCccccccccccccCccccc---chhHhhhcCc
Q 008662 270 SGDLSPKSTLELLRGK---ENAVLIDVR---------HEDLRERDGIPDLRRGARFRYASVYLPEVG---GSVKKLLRGG 334 (558)
Q Consensus 270 ~g~ISp~Ea~elL~~~---~~avLIDVR---------s~~Ef~~GHIPGA~gai~~d~~nIPL~eL~---~~l~ell~~~ 334 (558)
...|+++++.+++.+. ++.+||||| ++.||..||||||+ |+|+.++. .....+++++
T Consensus 21 ~~lIs~~~l~~~l~~~~~~~~~~ilDvR~~~~~~~~~~~~ey~~gHIpGAi--------~i~~~~~~~~~~~~~~~lp~~ 92 (302)
T 3olh_A 21 QSMVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAA--------FFDIDQCSDRTSPYDHMLPGA 92 (302)
T ss_dssp CCEECHHHHHHHHHCCCSSCCEEEEECCCCCCC--CCHHHHHHHSCCTTCE--------ECCTTTSSCSSCSSSSCCCCH
T ss_pred CCccCHHHHHHHhcCcCCCCCEEEEEeecCCCccCcccHHHHhhCcCCCCe--------EeCHHHhcCcCCCCCCCCCCH
Confidence 3579999999999643 379999999 88999999999998 78876543 2234456667
Q ss_pred hhhhhHHHHHHHhhhcccCCCceEEEEeCC---CchHHHHHHHHHHccCCCEEEecchHHHHHHcCCCeeccC
Q 008662 335 RELDDTLTAAVIRNLKIVQDRSKVIVMDAD---GTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELK 404 (558)
Q Consensus 335 ~~L~~ll~aaGI~~Lk~~~kdk~IVVyC~s---G~RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaAGLPV~~~~ 404 (558)
+.+++.+.++|+ +++++|||||++ +.++.++++.|+.+||++|++|+||+.+|+++|+|++...
T Consensus 93 ~~~~~~~~~lgi------~~~~~VVvyc~~~~g~~~a~ra~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~ 159 (302)
T 3olh_A 93 EHFAEYAGRLGV------GAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLDGGLRHWLRQNLPLSSGK 159 (302)
T ss_dssp HHHHHHHHHTTC------CSSCEEEEECCCTTSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHSCCC-CCSC
T ss_pred HHHHHHHHHcCC------CCCCEEEEEeCCCCCcchHHHHHHHHHHcCCCcEEECCCCHHHHHHcCCCcccCC
Confidence 778888888887 689999999964 3479999999999999999999999999999999998863
No 37
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.71 E-value=8.4e-18 Score=166.83 Aligned_cols=113 Identities=22% Similarity=0.201 Sum_probs=94.0
Q ss_pred cCHHHHHHHHhCCCCcEEEEcCChhhHhh----------------CCCCCccccccccccccCcccccchhHhhhcCchh
Q 008662 273 LSPKSTLELLRGKENAVLIDVRHEDLRER----------------DGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRE 336 (558)
Q Consensus 273 ISp~Ea~elL~~~~~avLIDVRs~~Ef~~----------------GHIPGA~gai~~d~~nIPL~eL~~~l~ell~~~~~ 336 (558)
++++++.+++.+ ++ |||||++.||.. ||||||+ |+|+.++.... ..++++++
T Consensus 146 ~~~~el~~~~~~-~~--liDvR~~~e~~~~~~~~~~~~~~~~~~~ghIpgA~--------~ip~~~~~~~~-~~~~~~~~ 213 (277)
T 3aay_A 146 AFRDEVLAAINV-KN--LIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAI--------NVPWSRAANED-GTFKSDEE 213 (277)
T ss_dssp ECHHHHHHTTTT-SE--EEECSCHHHHHTSCCC-----CCCCSCCSBCTTCE--------ECCGGGGBCTT-SCBCCHHH
T ss_pred cCHHHHHHhcCC-CC--EEEeCChHHeeeeecccccccccccccCCcCCCce--------ecCHHHhcCCC-CcCCCHHH
Confidence 678999888743 33 999999999985 9999999 99987654322 23455667
Q ss_pred hhhHHHHHHHhhhcccCCCceEEEEeCCCchHHHHHHHHHH-ccCCCEEEecchHHHHHH-cCCCeecc
Q 008662 337 LDDTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRK-LGVMRAFLVQGGFQSWVK-EGLRIKEL 403 (558)
Q Consensus 337 L~~ll~aaGI~~Lk~~~kdk~IVVyC~sG~RS~~AA~~L~~-~Gf~nVy~LdGG~~aWka-AGLPV~~~ 403 (558)
+.+.+.++++ +++++||+||++|.||..+++.|++ +||++|++|+|||.+|.+ +|+|++.+
T Consensus 214 l~~~~~~~~~------~~~~~iv~yC~~G~rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~g~pv~~g 276 (277)
T 3aay_A 214 LAKLYADAGL------DNSKETIAYCRIGERSSHTWFVLRELLGHQNVKNYDGSWTEYGSLVGAPIELG 276 (277)
T ss_dssp HHHHHHHHTC------CTTSCEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCBCC
T ss_pred HHHHHHHcCC------CCCCCEEEEcCcHHHHHHHHHHHHHHcCCCcceeeCchHHHHhcCCCCCCccC
Confidence 7777777776 6899999999999999999999995 999999999999999999 99999763
No 38
>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1
Probab=99.71 E-value=9e-18 Score=154.58 Aligned_cols=109 Identities=18% Similarity=0.213 Sum_probs=87.4
Q ss_pred CCcCHHHHHHHHhCC-----CCcEEEEcCChhhHhhCCCCCccccccccccccCcccccchhHhhhcCchhhhhHHHHHH
Q 008662 271 GDLSPKSTLELLRGK-----ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAV 345 (558)
Q Consensus 271 g~ISp~Ea~elL~~~-----~~avLIDVRs~~Ef~~GHIPGA~gai~~d~~nIPL~eL~~~l~ell~~~~~L~~ll~aaG 345 (558)
..|+++++.+++.++ ++.+|||||++.||..||||||+ |+|+.++........ ..
T Consensus 23 ~~is~~el~~~l~~~~~~~~~~~~liDvR~~~e~~~ghIpgAi--------nip~~~~~~~~~~~~---~~--------- 82 (161)
T 1c25_A 23 KYISPEIMASVLNGKFANLIKEFVIIDCRYPYEYEGGHIKGAV--------NLHMEEEVEDFLLKK---PI--------- 82 (161)
T ss_dssp CEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCE--------ECCSHHHHHHHTTTS---CC---------
T ss_pred ceeCHHHHHHHHhccccccCCCeEEEECCChHHccCCcccCcE--------eCChhHHHHHHHhhh---hh---------
Confidence 579999999999643 47899999999999999999999 999876543221000 00
Q ss_pred HhhhcccCCCceE--EEEeC-CCchHHHHHHHHHHc----------cCCCEEEecchHHHHHHcCCCeeccC
Q 008662 346 IRNLKIVQDRSKV--IVMDA-DGTRSKGIARSLRKL----------GVMRAFLVQGGFQSWVKEGLRIKELK 404 (558)
Q Consensus 346 I~~Lk~~~kdk~I--VVyC~-sG~RS~~AA~~L~~~----------Gf~nVy~LdGG~~aWkaAGLPV~~~~ 404 (558)
..+++++| |+||+ +|.||..+++.|++. ||++|++|+|||.+|.+++.|+..+.
T Consensus 83 -----~~~~~~~ivvv~yC~~sg~rs~~aa~~L~~~~~~~~~l~~~G~~~v~~l~GG~~~W~~~~~~~~~~~ 149 (161)
T 1c25_A 83 -----VPTDGKRVIVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQSYCEPP 149 (161)
T ss_dssp -----CCCTTSEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHHHGGGEESS
T ss_pred -----ccCCCCCeEEEEEcCCCCcchHHHHHHHHHHHHhhhhccccCCceEEEEcCCHHHHHHHcccccCCC
Confidence 01467776 67899 999999999999864 99999999999999999999988753
No 39
>2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens}
Probab=99.70 E-value=1.2e-17 Score=148.29 Aligned_cols=121 Identities=17% Similarity=0.224 Sum_probs=81.3
Q ss_pred CcCHHHHHH--------HHhCCCCcEEEEcCChhhHhhCCCCCccccccccccccCcccccchhHhhhcCchhhhhHHHH
Q 008662 272 DLSPKSTLE--------LLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTA 343 (558)
Q Consensus 272 ~ISp~Ea~e--------lL~~~~~avLIDVRs~~Ef~~GHIPGA~gai~~d~~nIPL~eL~~~l~ell~~~~~L~~ll~a 343 (558)
.|+++|+.+ ++. +++.+|||||++.||..||||||+ |+|+.++..... +..+...+...+..
T Consensus 2 ~Is~~~l~~~l~~~~~~~l~-~~~~~iiDvR~~~e~~~ghIpgA~--------~ip~~~~~~~~~-~~~~~~~~~~~~~~ 71 (142)
T 2ouc_A 2 IIYPNDLAKKMTKCSKSHLP-SQGPVIIDCRPFMEYNKSHIQGAV--------HINCADKISRRR-LQQGKITVLDLISC 71 (142)
T ss_dssp EECHHHHHHHHHC-----------CEEEECSCHHHHHHEEETTCE--------ECCCSSHHHHHH-HHTTSSCHHHHHHT
T ss_pred ccCHHHHHHHHHhcccccCC-CCCCEEEEeCCHHHhhhhhccCcc--------ccCccHHHHHHH-hhcCCcchhhhCCC
Confidence 588999998 443 457899999999999999999999 899876532111 10111111121111
Q ss_pred HHH-hhhcccCCCceEEEEeCCCchH---------HHHHHHHHHccCCCEEEecchHHHHHHcCCCeeccC
Q 008662 344 AVI-RNLKIVQDRSKVIVMDADGTRS---------KGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELK 404 (558)
Q Consensus 344 aGI-~~Lk~~~kdk~IVVyC~sG~RS---------~~AA~~L~~~Gf~nVy~LdGG~~aWkaAGLPV~~~~ 404 (558)
.+. ..++.. ++++||+||++|.|+ ..++..|...|| +|++|+|||.+|.++|.|+....
T Consensus 72 ~~~~~~~~~~-~~~~ivvyc~~g~~~~~~~~~~~~~~~~~~L~~~G~-~v~~l~GG~~~w~~~g~~~~~~~ 140 (142)
T 2ouc_A 72 REGKDSFKRI-FSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQNHENLCDNS 140 (142)
T ss_dssp TSCTTHHHHH-HHSCEEEECSSCCCGGGCCTTSHHHHHHHHHHHTTC-CCEEETTHHHHHTTTCGGGEEEC
T ss_pred hhhhHHHhcc-CCCcEEEEECCCCchhhcCcccHHHHHHHHHHHcCC-cEEEEccCHHHHHHHCHHhhccc
Confidence 000 000000 268999999999874 567888999999 99999999999999999987643
No 40
>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A
Probab=99.70 E-value=1.1e-17 Score=152.56 Aligned_cols=123 Identities=17% Similarity=0.174 Sum_probs=86.1
Q ss_pred CCcCHHHHHHHHhC-CCCcEEEEcCChhhHhhCCCCCccccccccccccCccccc-chhHhhhcCchhhhhHHHHHHHhh
Q 008662 271 GDLSPKSTLELLRG-KENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVG-GSVKKLLRGGRELDDTLTAAVIRN 348 (558)
Q Consensus 271 g~ISp~Ea~elL~~-~~~avLIDVRs~~Ef~~GHIPGA~gai~~d~~nIPL~eL~-~~l~ell~~~~~L~~ll~aaGI~~ 348 (558)
+.|+++++.+++++ +++.+|||||++.||..||||||+ |+|+.++. .++.. +...+..++......
T Consensus 4 ~~Is~~~l~~~l~~~~~~~~iiDvR~~~ey~~gHIpgAi--------nip~~~l~~~~~~~---~~~~~~~ll~~~~~~- 71 (153)
T 2vsw_A 4 TQIVTERLVALLESGTEKVLLIDSRPFVEYNTSHILEAI--------NINCSKLMKRRLQQ---DKVLITELIQHSAKH- 71 (153)
T ss_dssp EEECHHHHHHHHTSTTCCEEEEECSCHHHHHHCEETTCE--------ECCCCHHHHHHHHT---TSSCHHHHHHHSCSS-
T ss_pred ccccHHHHHHHHhcCCCCEEEEECCCHHHhccCccCCCe--------eeChHHHHHhhhhc---CCcCHHHhcCchhhh-
Confidence 57999999999963 457899999999999999999999 99987652 22110 000011111000000
Q ss_pred hcccCCCceEEEEeCCCchHHHH------HHHHHH--ccCCCEEEecchHHHHHHcCCCeeccCc
Q 008662 349 LKIVQDRSKVIVMDADGTRSKGI------ARSLRK--LGVMRAFLVQGGFQSWVKEGLRIKELKS 405 (558)
Q Consensus 349 Lk~~~kdk~IVVyC~sG~RS~~A------A~~L~~--~Gf~nVy~LdGG~~aWkaAGLPV~~~~~ 405 (558)
....+++++|||||++|.|+..+ ++.|+. .||++|++|+|||.+|.+.+.++....+
T Consensus 72 ~~~~~~~~~iVvyc~~g~~s~~a~~~~~~~~~L~~l~~G~~~v~~L~GG~~~W~~~~~~~~~~~~ 136 (153)
T 2vsw_A 72 KVDIDCSQKVVVYDQSSQDVASLSSDCFLTVLLGKLEKSFNSVHLLAGGFAEFSRCFPGLCEGKS 136 (153)
T ss_dssp CCCCCTTSEEEEECSSCCCGGGSCTTSHHHHHHHHHHHHCSCEEEETTHHHHHHHHCGGGEEC--
T ss_pred hhccCCCCeEEEEeCCCCcccccccchHHHHHHHHHHhCCCcEEEEeChHHHHHHhChhhhcCCC
Confidence 00136789999999999988766 577774 4999999999999999998776666443
No 41
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.70 E-value=4.2e-17 Score=166.83 Aligned_cols=112 Identities=20% Similarity=0.218 Sum_probs=90.7
Q ss_pred cCHHHHHHHHhCCCCcEEEEcCChhhHhh----------------CCCCCccccccccccccCcccccchhHhhhcCchh
Q 008662 273 LSPKSTLELLRGKENAVLIDVRHEDLRER----------------DGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRE 336 (558)
Q Consensus 273 ISp~Ea~elL~~~~~avLIDVRs~~Ef~~----------------GHIPGA~gai~~d~~nIPL~eL~~~l~ell~~~~~ 336 (558)
++++|+.+++.+ . +|||||++.||.. ||||||+ |+|+.++.+.-. .++++++
T Consensus 181 i~~~el~~~l~~--~-~liDvR~~~e~~~~~~~~~~~~~~~~~~~GhIpGA~--------niP~~~~~~~~g-~~~~~~~ 248 (318)
T 3hzu_A 181 AFRDDVLAILGA--Q-PLIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTAV--------HIPWGKAADESG-RFRSREE 248 (318)
T ss_dssp CCHHHHHHHTTT--S-CEEECSCHHHHHTSCSSCTTSCSCSCSSCSBCTTCE--------ECCGGGGBCTTS-CBCCHHH
T ss_pred ccHHHHHHhhcC--C-eEEecCCHHHhcccccCccccccccCCcCcCCCCee--------ecCHHHhcCCCC-cCCCHHH
Confidence 678999998853 3 9999999999998 9999999 999876643221 2333344
Q ss_pred hhhHHHHHHHhhhcccCCCceEEEEeCCCchHHHHHHHHHH-ccCCCEEEecchHHHHHH-cCCCeeccC
Q 008662 337 LDDTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRK-LGVMRAFLVQGGFQSWVK-EGLRIKELK 404 (558)
Q Consensus 337 L~~ll~aaGI~~Lk~~~kdk~IVVyC~sG~RS~~AA~~L~~-~Gf~nVy~LdGG~~aWka-AGLPV~~~~ 404 (558)
+.+.+ .+ ++++++||+||++|.||..++..|++ +||++|++|+|||.+|.+ .|+|++++.
T Consensus 249 l~~~~--~~------l~~~~~ivvyC~sG~rs~~a~~~L~~~~G~~~v~~~~GG~~~W~~~~g~Pv~~g~ 310 (318)
T 3hzu_A 249 LERLY--DF------INPDDQTVVYCRIGERSSHTWFVLTHLLGKADVRNYDGSWTEWGNAVRVPIVAGE 310 (318)
T ss_dssp HHHHT--TT------CCTTCCCEEECSSSHHHHHHHHHHHHTSCCSSCEECTTHHHHHTTSTTCCCBCSS
T ss_pred HHHHh--cC------CCCCCcEEEEcCChHHHHHHHHHHHHHcCCCCeeEeCCcHHHHhcCCCCCcccCC
Confidence 44433 22 47899999999999999999999997 999999999999999995 799999864
No 42
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.69 E-value=3.7e-17 Score=174.50 Aligned_cols=101 Identities=25% Similarity=0.389 Sum_probs=90.2
Q ss_pred CCcCHHHHHHHHhCCCCcEEEEcCChhhHhhCCCCCccccccccccccCcccccchhHhhhcCchhhhhHHHHHHHhhhc
Q 008662 271 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 350 (558)
Q Consensus 271 g~ISp~Ea~elL~~~~~avLIDVRs~~Ef~~GHIPGA~gai~~d~~nIPL~eL~~~l~ell~~~~~L~~ll~aaGI~~Lk 350 (558)
..++++++.+++. +++.+|||||++.||+.||||||+ |+|+.++.+.+.+
T Consensus 374 ~~i~~~~l~~~~~-~~~~~lvDvR~~~e~~~ghIpgA~--------~ip~~~l~~~~~~--------------------- 423 (474)
T 3tp9_A 374 ANVSPDEVRGALA-QQGLWLLDVRNVDEWAGGHLPQAH--------HIPLSKLAAHIHD--------------------- 423 (474)
T ss_dssp EEECHHHHHHTTT-TTCCEEEECSCHHHHHHCBCTTCE--------ECCHHHHTTTGGG---------------------
T ss_pred cccCHHHHHHHhc-CCCcEEEECCCHHHHhcCcCCCCE--------ECCHHHHHHHHhc---------------------
Confidence 4689999999885 468899999999999999999999 9999877655432
Q ss_pred ccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcCCCeec
Q 008662 351 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKE 402 (558)
Q Consensus 351 ~~~kdk~IVVyC~sG~RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaAGLPV~~ 402 (558)
++++++||+||++|.||..+++.|+.+||++|++|+|||.+|+++|+|+++
T Consensus 424 -l~~~~~vvv~C~~G~ra~~a~~~L~~~G~~~v~~~~Gg~~~W~~~g~p~~~ 474 (474)
T 3tp9_A 424 -VPRDGSVCVYCRTGGRSAIAASLLRAHGVGDVRNMVGGYEAWRGKGFPVEA 474 (474)
T ss_dssp -SCSSSCEEEECSSSHHHHHHHHHHHHHTCSSEEEETTHHHHHHHTTCCCBC
T ss_pred -CCCCCEEEEECCCCHHHHHHHHHHHHcCCCCEEEecChHHHHHhCCCCCCC
Confidence 368999999999999999999999999999999999999999999999863
No 43
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.69 E-value=8.9e-18 Score=176.00 Aligned_cols=116 Identities=19% Similarity=0.227 Sum_probs=98.5
Q ss_pred CCcCHHHHHHHHhCCCCcEEEEcCC--------hhhHhhCCCCCccccccccccccCccc-ccch-----hHhhhcCchh
Q 008662 271 GDLSPKSTLELLRGKENAVLIDVRH--------EDLRERDGIPDLRRGARFRYASVYLPE-VGGS-----VKKLLRGGRE 336 (558)
Q Consensus 271 g~ISp~Ea~elL~~~~~avLIDVRs--------~~Ef~~GHIPGA~gai~~d~~nIPL~e-L~~~-----l~ell~~~~~ 336 (558)
..|+++++.+++.+ .+|||||+ +.||..||||||+ |+|+.+ +... ...++++++.
T Consensus 14 ~~Is~~el~~~l~~---~~iIDvR~~~~~~~~~~~ey~~gHIpGAi--------~ip~~~~l~~~~~~~~~~~~lp~~~~ 82 (373)
T 1okg_A 14 VFLDPSEVADHLAE---YRIVDCRYSLKIKDHGSIQYAKEHVKSAI--------RADVDTNLSKLVPTSTARHPLPPXAE 82 (373)
T ss_dssp CEECHHHHTTCGGG---SEEEECCCCSSSTTTTTTHHHHCEETTCE--------ECCTTTTSCCCCTTCCCSSCCCCHHH
T ss_pred cEEcHHHHHHHcCC---cEEEEecCCccccccchhHHhhCcCCCCE--------EeCchhhhhcccccCCccccCCCHHH
Confidence 47999999988842 89999998 6999999999999 888865 6442 2345666677
Q ss_pred hhhHHHHHHHhhhcccCCCceEEEEe-CCCchHH-HHHHHHHHccCCCEEEecchHHHHHHcCCCeeccC
Q 008662 337 LDDTLTAAVIRNLKIVQDRSKVIVMD-ADGTRSK-GIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELK 404 (558)
Q Consensus 337 L~~ll~aaGI~~Lk~~~kdk~IVVyC-~sG~RS~-~AA~~L~~~Gf~nVy~LdGG~~aWkaAGLPV~~~~ 404 (558)
+++.+..+++ +++++||||| ++|.|+. ++++.|+.+|| +|++|+||+.+|+++|+|++...
T Consensus 83 f~~~l~~~gi------~~d~~VVvYc~~~G~rsa~ra~~~L~~~G~-~V~~L~GG~~aW~~~g~pv~~~~ 145 (373)
T 1okg_A 83 FIDWCMANGM------AGELPVLCYDDECGAMGGCRLWWMLNSLGA-DAYVINGGFQACKAAGLEMESGE 145 (373)
T ss_dssp HHHHHHHTTC------SSSSCEEEECSSTTTTTHHHHHHHHHHHTC-CEEEETTTTHHHHTTTCCEECSC
T ss_pred HHHHHHHcCC------CCCCeEEEEeCCCCchHHHHHHHHHHHcCC-eEEEeCCCHHHHHhhcCCcccCC
Confidence 7877877777 6899999999 7888886 99999999999 99999999999999999998753
No 44
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.69 E-value=4.6e-17 Score=177.39 Aligned_cols=107 Identities=18% Similarity=0.192 Sum_probs=94.2
Q ss_pred CCcCHHHHHHHHhCCCCcEEEEcCChhhHhhCCCCCccccccccccccCcccccchhHhhhcCchhhhhHHHHHHHhhhc
Q 008662 271 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 350 (558)
Q Consensus 271 g~ISp~Ea~elL~~~~~avLIDVRs~~Ef~~GHIPGA~gai~~d~~nIPL~eL~~~l~ell~~~~~L~~ll~aaGI~~Lk 350 (558)
..|+++++.+++.++++.+|||||++.||..+|||||+ |+|+.++...+.++.
T Consensus 7 ~~is~~~l~~~l~~~~~~~liDvR~~~e~~~ghIpgAv--------~ip~~~~~~~~~~l~------------------- 59 (539)
T 1yt8_A 7 AVRTFHDIRAALLARRELALLDVREEDPFAQAHPLFAA--------NLPLSRLELEIHARV------------------- 59 (539)
T ss_dssp EEECHHHHHHHHHHTCCBEEEECSCHHHHTTSBCTTCE--------ECCGGGHHHHHHHHS-------------------
T ss_pred cccCHHHHHHHHhCCCCeEEEECCCHHHHhcCcCCCCE--------ECCHHHHHHHHHhhC-------------------
Confidence 47999999999965557999999999999999999999 999987766554432
Q ss_pred ccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcCCCeeccCc
Q 008662 351 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 405 (558)
Q Consensus 351 ~~~kdk~IVVyC~sG~RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaAGLPV~~~~~ 405 (558)
.+++++|||||++|.+|..+++.|+.+||++|++|+||+.+|+++|+|++.+.+
T Consensus 60 -~~~~~~iVvyc~~g~~s~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~ 113 (539)
T 1yt8_A 60 -PRRDTPITVYDDGEGLAPVAAQRLHDLGYSDVALLDGGLSGWRNAGGELFRDVN 113 (539)
T ss_dssp -CCTTSCEEEECSSSSHHHHHHHHHHHTTCSSEEEETTHHHHHHHTTCCCBCSSS
T ss_pred -CCCCCeEEEEECCCChHHHHHHHHHHcCCCceEEeCCCHHHHHhcCCCcccCCc
Confidence 147899999999999999999999999999999999999999999999987543
No 45
>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}
Probab=99.68 E-value=5.8e-17 Score=149.04 Aligned_cols=107 Identities=20% Similarity=0.234 Sum_probs=83.0
Q ss_pred CCcCHHHHHHHHhCC---CCcEEEEcCChhhHhhCCCCCccccccccccccCcccccc-hhHhhhcCchhhhhHHHHHHH
Q 008662 271 GDLSPKSTLELLRGK---ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGG-SVKKLLRGGRELDDTLTAAVI 346 (558)
Q Consensus 271 g~ISp~Ea~elL~~~---~~avLIDVRs~~Ef~~GHIPGA~gai~~d~~nIPL~eL~~-~l~ell~~~~~L~~ll~aaGI 346 (558)
..|+++++.+++.+. ++.+|||||++ ||..||||||+ |+|+.++.. .+.++ ...+ .
T Consensus 5 ~~Is~~el~~~l~~~~~~~~~~lIDvR~~-ey~~gHIpGAi--------nip~~~l~~~~~~~l-------~~~l---~- 64 (152)
T 2j6p_A 5 TYIKPEELVELLDNPDSLVKAAVIDCRDS-DRDCGFIVNSI--------NMPTISCTEEMYEKL-------AKTL---F- 64 (152)
T ss_dssp EEECHHHHHHHHHSHHHHHTEEEEECCST-TGGGCBCTTCE--------ECCTTTCCHHHHHHH-------HHHH---H-
T ss_pred CccCHHHHHHHHhCCCCCCCEEEEEcCcH-HhCcCcCCCcE--------ECChhHhhHHHHHHH-------HHHh---c-
Confidence 478999999998642 37899999999 99999999999 999877653 22211 1111 0
Q ss_pred hhhcccCCCceEEEEe-CCCchHHHHH----HHHHHccC--CCEEEecchHHHHHHcCCCeec
Q 008662 347 RNLKIVQDRSKVIVMD-ADGTRSKGIA----RSLRKLGV--MRAFLVQGGFQSWVKEGLRIKE 402 (558)
Q Consensus 347 ~~Lk~~~kdk~IVVyC-~sG~RS~~AA----~~L~~~Gf--~nVy~LdGG~~aWkaAGLPV~~ 402 (558)
....+.||+|| ++|.|+..++ +.|+++|| ++|++|+|||.+|.++|.++..
T Consensus 65 -----~~~~~~vV~yC~~sg~rs~~aa~~~~~~L~~~G~~~~~v~~L~GG~~~W~~~g~~~~~ 122 (152)
T 2j6p_A 65 -----EEKKELAVFHCAQSLVRAPKGANRFALAQKKLGYVLPAVYVLRGGWEAFYHMYGDVRP 122 (152)
T ss_dssp -----HTTCCEEEEECSSSSSHHHHHHHHHHHHHHHHTCCCSEEEEETTHHHHHHHHHTTTCG
T ss_pred -----ccCCCEEEEEcCCCCCccHHHHHHHHHHHHHcCCCCCCEEEEcCcHHHHHHHcCCCCC
Confidence 02334678889 7999999988 77888997 5899999999999999988765
No 46
>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A
Probab=99.68 E-value=4.5e-17 Score=152.06 Aligned_cols=109 Identities=20% Similarity=0.272 Sum_probs=83.9
Q ss_pred CCcCHHHHHHHHhCC-----CCcEEEEcCChhhHhhCCCCCccccccccccccCcccccchhHhhhcCchhhhhHHHHHH
Q 008662 271 GDLSPKSTLELLRGK-----ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAV 345 (558)
Q Consensus 271 g~ISp~Ea~elL~~~-----~~avLIDVRs~~Ef~~GHIPGA~gai~~d~~nIPL~eL~~~l~ell~~~~~L~~ll~aaG 345 (558)
..|+++++.+++.+. ++.+|||||++.||..||||||+ |+|+.++........ .
T Consensus 24 ~~is~~el~~~l~~~~~~~~~~~~liDvR~~~ey~~ghIpgAi--------nip~~~l~~~~~~~~----~--------- 82 (175)
T 2a2k_A 24 KYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAV--------NLPLERDAESFLLKS----P--------- 82 (175)
T ss_dssp CEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCE--------ECCSHHHHHHHHHSS----C---------
T ss_pred ceeCHHHHHHHHhcccccCCCCEEEEECCCHHHHcCCcCCCcE--------ECChhHHHHHhhhhh----h---------
Confidence 579999999999643 46899999999999999999999 999876543211000 0
Q ss_pred HhhhcccCCCceEEE--EeC-CCchHHHHHHHHHH----------ccCCCEEEecchHHHHHHcCCCeecc
Q 008662 346 IRNLKIVQDRSKVIV--MDA-DGTRSKGIARSLRK----------LGVMRAFLVQGGFQSWVKEGLRIKEL 403 (558)
Q Consensus 346 I~~Lk~~~kdk~IVV--yC~-sG~RS~~AA~~L~~----------~Gf~nVy~LdGG~~aWkaAGLPV~~~ 403 (558)
+...+++++||| ||+ +|.||..+++.|++ +||++|++|+||+.+|.++|.|+..+
T Consensus 83 ---~~~~~~~~~ivvv~yC~~~g~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~~~~~~~~ 150 (175)
T 2a2k_A 83 ---IAPCSLDKRVILIFHSEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNFCEP 150 (175)
T ss_dssp ---CCC----CEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEES
T ss_pred ---hccccCCCCeEEEEECCCCCCccHHHHHHHHHhhhhhhhhhhcCCceEEEEcCCHHHHHHHCccccCC
Confidence 000136788754 699 89999999999986 49999999999999999999998664
No 47
>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A
Probab=99.67 E-value=6.6e-17 Score=156.50 Aligned_cols=108 Identities=21% Similarity=0.266 Sum_probs=87.1
Q ss_pred CCcCHHHHHHHHhCC-----CCcEEEEcCChhhHhhCCCCCccccccccccccCcccccch-hHhhhcCchhhhhHHHHH
Q 008662 271 GDLSPKSTLELLRGK-----ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGS-VKKLLRGGRELDDTLTAA 344 (558)
Q Consensus 271 g~ISp~Ea~elL~~~-----~~avLIDVRs~~Ef~~GHIPGA~gai~~d~~nIPL~eL~~~-l~ell~~~~~L~~ll~aa 344 (558)
..|+++++.+++.+. ++.+|||||++.||..||||||+ |+|+.++... +... ..
T Consensus 44 ~~Is~~el~~~l~~~~~~~~~~~~lIDvR~~~Ey~~gHIpGAi--------nip~~~l~~~~~~~~----~~-------- 103 (211)
T 1qb0_A 44 KYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAV--------NLPLERDAESFLLKS----PI-------- 103 (211)
T ss_dssp CEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCE--------ECCSHHHHHHHHHTT----TC--------
T ss_pred CeeCHHHHHHHHhcccccCCCCEEEEECCCHHHHccCcCCCCE--------ECCchHHHHHhhhhh----hh--------
Confidence 579999999999642 36899999999999999999999 9998765432 1100 00
Q ss_pred HHhhhcccCCCceE--EEEeC-CCchHHHHHHHHHH----------ccCCCEEEecchHHHHHHcCCCeecc
Q 008662 345 VIRNLKIVQDRSKV--IVMDA-DGTRSKGIARSLRK----------LGVMRAFLVQGGFQSWVKEGLRIKEL 403 (558)
Q Consensus 345 GI~~Lk~~~kdk~I--VVyC~-sG~RS~~AA~~L~~----------~Gf~nVy~LdGG~~aWkaAGLPV~~~ 403 (558)
+ ..+++++| |+||+ +|.||..+++.|+. +||++|++|+|||.+|.++|.|+..+
T Consensus 104 -l----~~~~d~~ivvVvyC~~sG~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~g~~~~~~ 170 (211)
T 1qb0_A 104 -A----PCSLDKRVILIFHCEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNFCEP 170 (211)
T ss_dssp -C----CSSTTSEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEES
T ss_pred -c----cccCCCCeEEEEECCCCCccHHHHHHHHHhhhhhhhhhhhcCCCeEEEECCHHHHHHHHCccccCC
Confidence 0 01367887 78899 99999999999986 69999999999999999999998764
No 48
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.66 E-value=1.6e-16 Score=173.21 Aligned_cols=105 Identities=15% Similarity=0.282 Sum_probs=93.1
Q ss_pred CCcCHHHHHHHHhCCCCcEEEEcCChhhHhhCCCCCccccccccccccCcccccchhHhhhcCchhhhhHHHHHHHhhhc
Q 008662 271 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 350 (558)
Q Consensus 271 g~ISp~Ea~elL~~~~~avLIDVRs~~Ef~~GHIPGA~gai~~d~~nIPL~eL~~~l~ell~~~~~L~~ll~aaGI~~Lk 350 (558)
..|+++++.+++. +++.+|||||++.||+.||||||+ |+|+.+|...+.+
T Consensus 377 ~~i~~~~l~~~l~-~~~~~liDvR~~~e~~~ghIpgA~--------~ip~~~l~~~l~~--------------------- 426 (539)
T 1yt8_A 377 DTIDPTTLADWLG-EPGTRVLDFTASANYAKRHIPGAA--------WVLRSQLKQALER--------------------- 426 (539)
T ss_dssp CEECHHHHHHHTT-STTEEEEECSCHHHHHHCBCTTCE--------ECCGGGHHHHHHH---------------------
T ss_pred CccCHHHHHHHhc-CCCeEEEEeCCHHHhhcCcCCCch--------hCCHHHHHHHHHh---------------------
Confidence 4789999999985 467899999999999999999999 8998776655432
Q ss_pred ccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcCCCeeccCcc
Q 008662 351 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKSE 406 (558)
Q Consensus 351 ~~~kdk~IVVyC~sG~RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaAGLPV~~~~~~ 406 (558)
++++++||+||++|.||..+++.|+.+||++|++|+|||.+|.++|+|+++..+.
T Consensus 427 -l~~~~~ivv~C~sG~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~pv~~~~~~ 481 (539)
T 1yt8_A 427 -LGTAERYVLTCGSSLLARFAVAEVQALSGKPVFLLDGGTSAWVAAGLPTEDGESL 481 (539)
T ss_dssp -HCCCSEEEEECSSSHHHHHHHHHHHHHHCSCEEEETTHHHHHHHTTCCCBCSSCC
T ss_pred -CCCCCeEEEEeCCChHHHHHHHHHHHcCCCCEEEeCCcHHHHHhCCCCcccCCCC
Confidence 2678999999999999999999999999999999999999999999999986543
No 49
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.65 E-value=2.2e-16 Score=153.25 Aligned_cols=97 Identities=27% Similarity=0.330 Sum_probs=81.0
Q ss_pred cCHHHHHHHHhCCCCcEEEEcCChhhHhh----------CCCCCccccccccccccCcccccchhHhhhcCchhhhhHHH
Q 008662 273 LSPKSTLELLRGKENAVLIDVRHEDLRER----------DGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLT 342 (558)
Q Consensus 273 ISp~Ea~elL~~~~~avLIDVRs~~Ef~~----------GHIPGA~gai~~d~~nIPL~eL~~~l~ell~~~~~L~~ll~ 342 (558)
++++++.+ +.+|||||++.||.. ||||||+ |+|+.++.... +++.
T Consensus 123 i~~~e~~~------~~~liDvR~~~e~~~~~~~~~~~~~ghIpgA~--------~ip~~~~~~~~-----------e~~~ 177 (230)
T 2eg4_A 123 LTADEAAR------HPLLLDVRSPEEFQGKVHPPCCPRGGRIPGSK--------NAPLELFLSPE-----------GLLE 177 (230)
T ss_dssp CCHHHHHT------CSCEEECSCHHHHTTSCCCTTSSSCCBCTTCE--------ECCGGGGGCCT-----------THHH
T ss_pred eCHHHHhh------CCeEEeCCCHHHcCcccCCCCCccCCCCCCcE--------EcCHHHhCChH-----------HHHH
Confidence 56666543 678999999999999 9999999 99987765431 0222
Q ss_pred HHHHhhhcccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcCCCee
Q 008662 343 AAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIK 401 (558)
Q Consensus 343 aaGI~~Lk~~~kdk~IVVyC~sG~RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaAGLPV~ 401 (558)
+.++ +++++||+||++|.||..++..|+.+| ++|++|+|||.+|.+.|+|++
T Consensus 178 ~~~~------~~~~~iv~~C~~G~rs~~a~~~L~~~G-~~v~~~~Gg~~~W~~~g~p~~ 229 (230)
T 2eg4_A 178 RLGL------QPGQEVGVYCHSGARSAVAFFVLRSLG-VRARNYLGSMHEWLQEGLPTE 229 (230)
T ss_dssp HHTC------CTTCEEEEECSSSHHHHHHHHHHHHTT-CEEEECSSHHHHHHHTTCCCB
T ss_pred hcCC------CCCCCEEEEcCChHHHHHHHHHHHHcC-CCcEEecCcHHHHhhcCCCCC
Confidence 2333 689999999999999999999999999 899999999999999999986
No 50
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.65 E-value=1.2e-16 Score=168.98 Aligned_cols=118 Identities=16% Similarity=0.177 Sum_probs=93.8
Q ss_pred cCHHHHHHHHhCCCCcEEEEcCChhhH-----------hhCCCCCccccccccccccCcc-------cccchhHhhhcCc
Q 008662 273 LSPKSTLELLRGKENAVLIDVRHEDLR-----------ERDGIPDLRRGARFRYASVYLP-------EVGGSVKKLLRGG 334 (558)
Q Consensus 273 ISp~Ea~elL~~~~~avLIDVRs~~Ef-----------~~GHIPGA~gai~~d~~nIPL~-------eL~~~l~ell~~~ 334 (558)
|+++++.+++. .++.+|||||++.|| +.||||||+ |+|+. ++.+.. ..++++
T Consensus 274 i~~~e~~~~l~-~~~~~liDvR~~~e~~G~~~~~~~~~~~GhIpgAi--------~ip~~~~~~~~~~~~~~~-~~~~~~ 343 (423)
T 2wlr_A 274 LDMEQARGLLH-RQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGAR--------WGHAGSDSTHMEDFHNPD-GTMRSA 343 (423)
T ss_dssp ECHHHHHTTTT-CSSEEEEECSCHHHHHTSCCSSTTCCCCSEETTCE--------ECCCCSSTTCCGGGBCTT-SSBCCH
T ss_pred ecHHHHHHHhc-CCCceEEecCchhheeeeccCCCCCCcCCCCCCcc--------ccccccccccHHHHcCCC-CcCCCH
Confidence 78889888874 467899999999999 889999998 66553 332211 123344
Q ss_pred hhhhhHHHHHHHhhhcccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHH-cCCCeeccCcc
Q 008662 335 RELDDTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVK-EGLRIKELKSE 406 (558)
Q Consensus 335 ~~L~~ll~aaGI~~Lk~~~kdk~IVVyC~sG~RS~~AA~~L~~~Gf~nVy~LdGG~~aWka-AGLPV~~~~~~ 406 (558)
+++.+.+.+.++ +++++||+||++|.||..++..|+.+||++|++|+|||.+|.+ .|+|++++.+.
T Consensus 344 ~~l~~~~~~~~~------~~~~~ivvyC~sG~rs~~aa~~L~~~G~~~v~~~~GG~~~W~~~~~~Pv~~~~~~ 410 (423)
T 2wlr_A 344 DDITAMWKAWNI------KPEQQVSFYCGTGWRASETFMYARAMGWKNVSVYDGGWYEWSSDPKNPVATGERG 410 (423)
T ss_dssp HHHHHHHHTTTC------CTTSEEEEECSSSHHHHHHHHHHHHTTCSSEEEESSHHHHHTTSTTSCEECSSCC
T ss_pred HHHHHHHHHcCC------CCCCcEEEECCcHHHHHHHHHHHHHcCCCCcceeCccHHHHhcCCCCCcccCCCC
Confidence 455555544444 6899999999999999999999999999999999999999998 99999986553
No 51
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=99.65 E-value=2.6e-16 Score=158.71 Aligned_cols=103 Identities=14% Similarity=0.228 Sum_probs=86.4
Q ss_pred CCcCHHHHHHHHhCCCCcEEEEcCChhhHhhCCCCCccccccccccccCcccccchhHhhhcCchhhhhHHHHHHHhhhc
Q 008662 271 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 350 (558)
Q Consensus 271 g~ISp~Ea~elL~~~~~avLIDVRs~~Ef~~GHIPGA~gai~~d~~nIPL~eL~~~l~ell~~~~~L~~ll~aaGI~~Lk 350 (558)
..|+++++.+++. +++.+|||||++.||+.||||||+ |+|+.++.+....+. ..+.
T Consensus 122 ~~Is~~el~~ll~-~~~~vlIDVR~~~Ey~~GHIpGAi--------niP~~~~~~~~~~l~----------~~l~----- 177 (265)
T 4f67_A 122 TYLSPEEWHQFIQ-DPNVILLDTRNDYEYELGTFKNAI--------NPDIENFREFPDYVQ----------RNLI----- 177 (265)
T ss_dssp CEECHHHHHHHTT-CTTSEEEECSCHHHHHHEEETTCB--------CCCCSSGGGHHHHHH----------HHTG-----
T ss_pred ceECHHHHHHHhc-CCCeEEEEeCCchHhhcCcCCCCE--------eCCHHHHHhhHHHHH----------Hhhh-----
Confidence 4799999999985 568999999999999999999999 999987765332210 0011
Q ss_pred ccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcCC
Q 008662 351 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGL 398 (558)
Q Consensus 351 ~~~kdk~IVVyC~sG~RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaAGL 398 (558)
.+++++||+||.+|.||..+++.|+.+||++|++|+||+.+|.+..-
T Consensus 178 -~~kdk~IVvyC~~G~RS~~Aa~~L~~~Gf~nV~~L~GGi~aW~~~~~ 224 (265)
T 4f67_A 178 -DKKDKKIAMFCTGGIRCEKTTAYMKELGFEHVYQLHDGILNYLESIP 224 (265)
T ss_dssp -GGTTSCEEEECSSSHHHHHHHHHHHHHTCSSEEEETTHHHHHHHHSC
T ss_pred -hCCCCeEEEEeCCChHHHHHHHHHHHcCCCCEEEecCHHHHHHHhcC
Confidence 26789999999999999999999999999999999999999998643
No 52
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*
Probab=99.64 E-value=1.8e-16 Score=149.16 Aligned_cols=112 Identities=17% Similarity=0.148 Sum_probs=84.7
Q ss_pred CCcCHHHHHHHHhCCC------CcEEEEcCChhhHhhCCCCCccccccccccccCcccccch---hHhhhcCchhhhhHH
Q 008662 271 GDLSPKSTLELLRGKE------NAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGS---VKKLLRGGRELDDTL 341 (558)
Q Consensus 271 g~ISp~Ea~elL~~~~------~avLIDVRs~~Ef~~GHIPGA~gai~~d~~nIPL~eL~~~---l~ell~~~~~L~~ll 341 (558)
..|+++++.+++.+.+ +.+|||||+ .||..||||||+ |+|+.++... +.++ ...+
T Consensus 31 ~~Is~~eL~~~l~~~~~~~~~~~~~iIDVR~-~Ey~~GHIpGAi--------niP~~~l~~~~~~l~~l-------~~~~ 94 (169)
T 3f4a_A 31 KYLDPTELHRWMQEGHTTTLREPFQVVDVRG-SDYMGGHIKDGW--------HYAYSRLKQDPEYLREL-------KHRL 94 (169)
T ss_dssp EEECHHHHHHHHHHTSCTTTCCCEEEEECCS-TTCTTCEETTCE--------ECCHHHHHHCHHHHHHH-------HHHH
T ss_pred cEeCHHHHHHHHhcCCccCcCCCEEEEECCc-hHHccCcCCCCE--------ECCHHHhhcccccHHHH-------HHHH
Confidence 5799999999997432 589999999 899999999999 9999877654 2222 1112
Q ss_pred HHHHHhhhcccCCCceEEEEeCCC-chHHHHHHHHHH----cc--CCCEEEecchHHHHHHcCCCeec
Q 008662 342 TAAVIRNLKIVQDRSKVIVMDADG-TRSKGIARSLRK----LG--VMRAFLVQGGFQSWVKEGLRIKE 402 (558)
Q Consensus 342 ~aaGI~~Lk~~~kdk~IVVyC~sG-~RS~~AA~~L~~----~G--f~nVy~LdGG~~aWkaAGLPV~~ 402 (558)
...++. ...+++|||||++| .|+..+++.|.+ .| |.+|++|+|||.+|++++.|...
T Consensus 95 ~~~~~~----~~~~~~IVvyC~sG~~Rs~~aa~~l~~~L~~~G~~~~~V~~L~GG~~aW~~~~~~~~~ 158 (169)
T 3f4a_A 95 LEKQAD----GRGALNVIFHCMLSQQRGPSAAMLLLRSLDTAELSRCRLWVLRGGFSRWQSVYGDDES 158 (169)
T ss_dssp HHHHHT----SSSCEEEEEECSSSSSHHHHHHHHHHHTCCHHHHTTEEEEEETTHHHHHHHHHTTCTT
T ss_pred Hhhccc----ccCCCeEEEEeCCCCCcHHHHHHHHHHHHHHcCCCCCCEEEECCCHHHHHHHcCCccc
Confidence 222221 12247999999997 799998877654 46 57999999999999999887654
No 53
>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}
Probab=99.62 E-value=4e-16 Score=152.82 Aligned_cols=107 Identities=21% Similarity=0.280 Sum_probs=80.7
Q ss_pred CCcCHHHHHHHHhCC-----CCcEEEEcCChhhHhhCCCCCccccccccccccCccc-ccchhHhhhcCchhhhhHHHHH
Q 008662 271 GDLSPKSTLELLRGK-----ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPE-VGGSVKKLLRGGRELDDTLTAA 344 (558)
Q Consensus 271 g~ISp~Ea~elL~~~-----~~avLIDVRs~~Ef~~GHIPGA~gai~~d~~nIPL~e-L~~~l~ell~~~~~L~~ll~aa 344 (558)
..|+++++.+++.+. ++++|||||++.||..||||||+ |||+.+ +...+...
T Consensus 57 ~~Is~~eL~~~l~~~~~~~~~~~~lIDVR~~~Ey~~GHIpGAi--------nIP~~~~l~~~l~~~-------------- 114 (216)
T 3op3_A 57 KYVNPETVAALLSGKFQGLIEKFYVIDCRYPYEYLGGHIQGAL--------NLYSQEELFNFFLKK-------------- 114 (216)
T ss_dssp EEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTSEETTCE--------ECCSHHHHHHHHTSS--------------
T ss_pred CEeCHHHHHHHHhCCCccccCCEEEEEeCcHHHHhcCCccCCE--------ECChHHHHHHHHhhc--------------
Confidence 579999999999643 26899999999999999999999 999864 32221100
Q ss_pred HHhhhcccCCCc--eEEEEeC-CCchHHHHHHHHHHc----------cCCCEEEecchHHHHHHcCCCeec
Q 008662 345 VIRNLKIVQDRS--KVIVMDA-DGTRSKGIARSLRKL----------GVMRAFLVQGGFQSWVKEGLRIKE 402 (558)
Q Consensus 345 GI~~Lk~~~kdk--~IVVyC~-sG~RS~~AA~~L~~~----------Gf~nVy~LdGG~~aWkaAGLPV~~ 402 (558)
++ + ..++++ +|||||+ +|.||..+++.|+.. ||++||+|+|||.+|.+..-.+-.
T Consensus 115 ~~--~-~~~~~k~~~VVvyC~~SG~Rs~~aa~~L~~~~~~~~~y~~lGf~~V~~L~GG~~aW~~~~~~lce 182 (216)
T 3op3_A 115 PI--V-PLDTQKRIIIVFHCEFSSERGPRMCRCLREEDRSLNQYPALYYPELYILKGGYRDFFPEYMELCE 182 (216)
T ss_dssp CC--C-CSSTTSEEEEEEECCC--CCHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEE
T ss_pred cc--c-ccccCCCCEEEEEeCCCChHHHHHHHHHHHcCcccccccccCCCcEEEECCcHHHHHHhCccccc
Confidence 00 0 012344 5999999 999999999999887 899999999999999987544443
No 54
>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1
Probab=99.60 E-value=2.6e-16 Score=143.13 Aligned_cols=111 Identities=25% Similarity=0.371 Sum_probs=80.0
Q ss_pred CCcCHHHHHHHHhCC-CCcEEEEcCChhhHhhCCCCCccccccccccccCccccc------c--hhHhhhcCchhhhhHH
Q 008662 271 GDLSPKSTLELLRGK-ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVG------G--SVKKLLRGGRELDDTL 341 (558)
Q Consensus 271 g~ISp~Ea~elL~~~-~~avLIDVRs~~Ef~~GHIPGA~gai~~d~~nIPL~eL~------~--~l~ell~~~~~L~~ll 341 (558)
..|+++++.+++.+. ++.+|||||++.||..||||||+ |+|+.++. . .+..++++... .+.+
T Consensus 16 ~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHIpgAi--------nip~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~ 86 (154)
T 1hzm_A 16 ISKTVAWLNEQLELGNERLLLMDCRPQELYESSHIESAI--------NVAIPGIMLRRLQKGNLPVRALFTRGED-RDRF 86 (154)
T ss_dssp SBSCCCCHHHHHHHCSSSCEEECCSTTHHHHHHTSSSCC--------CCCCSSHHHHTBCCSCCCTTTTSTTSHH-HHHH
T ss_pred cccCHHHHHHHHhCCCCCEEEEEcCCHHHHhhccccCce--------EeCccHHHHhhhhcCcccHHHhCCCHHH-HHHH
Confidence 478999999988642 37899999999999999999999 88886542 1 11122322211 1111
Q ss_pred HHHHHhhhcccCCCceEEEEeCCCchH-------HHHHHHHHHc---cCCCEEEecchHHHHHHcCCCe
Q 008662 342 TAAVIRNLKIVQDRSKVIVMDADGTRS-------KGIARSLRKL---GVMRAFLVQGGFQSWVKEGLRI 400 (558)
Q Consensus 342 ~aaGI~~Lk~~~kdk~IVVyC~sG~RS-------~~AA~~L~~~---Gf~nVy~LdGG~~aWkaAGLPV 400 (558)
.+ .+++++|||||++|.++ ..+++.|+.+ ||+ |++|+|||.+|++. +|.
T Consensus 87 --~~------~~~~~~iVvyc~~g~~~~~~~~aa~~~~~~l~~l~~~G~~-v~~L~GG~~~W~~~-~p~ 145 (154)
T 1hzm_A 87 --TR------RCGTDTVVLYDESSSDWNENTGGESLLGLLLKKLKDEGCR-AFYLEGGFSKFQAE-FSL 145 (154)
T ss_dssp --HH------STTSSCEEECCCSSSSSCSCSSCCSHHHHHHHHHHHTTCC-CEECCCCHHHHHHH-HCS
T ss_pred --hc------cCCCCeEEEEeCCCCccccccccchHHHHHHHHHHHCCCc-eEEEcChHHHHHHH-ChH
Confidence 12 35788999999999875 4456677765 998 99999999999885 443
No 55
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.59 E-value=3.5e-16 Score=163.93 Aligned_cols=104 Identities=17% Similarity=0.167 Sum_probs=82.4
Q ss_pred CCcEEEEcCChhhHh-----------hCCCCCccccccccccccCccccc--chhHhhhcCchhhhhHHHHH--HHhhhc
Q 008662 286 ENAVLIDVRHEDLRE-----------RDGIPDLRRGARFRYASVYLPEVG--GSVKKLLRGGRELDDTLTAA--VIRNLK 350 (558)
Q Consensus 286 ~~avLIDVRs~~Ef~-----------~GHIPGA~gai~~d~~nIPL~eL~--~~l~ell~~~~~L~~ll~aa--GI~~Lk 350 (558)
++.+|||||++.||. .||||||+ |+|+.++. +.....+++++++.+.+.++ ++
T Consensus 173 ~~~~lIDvR~~~Ef~G~~~~~~~~~~~GhIpGAi--------niP~~~l~~~~~~~~~~~~~~~l~~~~~~~~~gi---- 240 (373)
T 1okg_A 173 PQAIITDARSADRFASTVRPYAADKMPGHIEGAR--------NLPYTSHLVTRGDGKVLRSEEEIRHNIMTVVQGA---- 240 (373)
T ss_dssp TTCCEEECSCHHHHTCCSSCCTTCSSSSCSTTCE--------ECCGGGGEECCSSSCEECCHHHHHHHHHTTCC------
T ss_pred cCceEEeCCCHHHccccccccccCCcCccCCCcE--------EecHHHhhccCCCCCccCCHHHHHHHHHhhhcCC----
Confidence 467899999999999 99999999 99998764 21111134445566656555 55
Q ss_pred ccCC---CceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHH-cCCCeecc
Q 008662 351 IVQD---RSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVK-EGLRIKEL 403 (558)
Q Consensus 351 ~~~k---dk~IVVyC~sG~RS~~AA~~L~~~Gf~nVy~LdGG~~aWka-AGLPV~~~ 403 (558)
++ +++||+||++|.||..++..|+.+||++|++|+|||.+|.. .++|++..
T Consensus 241 --~~~~~d~~ivvyC~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~pv~~~ 295 (373)
T 1okg_A 241 --GDAADLSSFVFSCGSGVTACINIALVHHLGLGHPYLYCGSWSEYSGLFRPPIMRS 295 (373)
T ss_dssp -----CCCTTSEEECSSSSTHHHHHHHHHHTTSCCCEECSSHHHHHHHHTHHHHHHH
T ss_pred --CcccCCCCEEEECCchHHHHHHHHHHHHcCCCCeeEeCChHHHHhcCCCCCcccC
Confidence 56 89999999999999999999999999999999999999997 78988653
No 56
>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}
Probab=99.57 E-value=2.7e-15 Score=138.34 Aligned_cols=107 Identities=17% Similarity=0.235 Sum_probs=78.8
Q ss_pred CCcCHHHHHHHHhC-------CCCcEEEEcCChhhHhhCCCCCccccccccccccCccccc--chhH-------hhhcCc
Q 008662 271 GDLSPKSTLELLRG-------KENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVG--GSVK-------KLLRGG 334 (558)
Q Consensus 271 g~ISp~Ea~elL~~-------~~~avLIDVRs~~Ef~~GHIPGA~gai~~d~~nIPL~eL~--~~l~-------ell~~~ 334 (558)
..|+++++.+++.. +++.+|||||++.||..||||||+ |+|+.++. .++. .+++..
T Consensus 11 ~~is~~el~~~l~~~~~~~~~~~~~~liDvR~~~e~~~ghI~ga~--------~i~~~~l~~~~~~~~~~~~~~~~~~~~ 82 (158)
T 3tg1_B 11 KIIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGAV--------HINCADKISRRRLQQGKITVLDLISCR 82 (158)
T ss_dssp CEECHHHHHHHHCC----------CEEEECSCHHHHHHCCBTTCE--------ECCCSSHHHHHHHTTSSCCHHHHTCCC
T ss_pred cEecHHHHHHHHHhcccccCCCCCEEEEEcCCHHHHHhCCCCCce--------eechhHHHHHhhhhcCcccHHhhcCCH
Confidence 57999999999953 356899999999999999999999 89987652 1111 011110
Q ss_pred hhhhhHHHHHHHhhhcccCCCceEEEEeCCC---------chHHHHHHHHHHccCCCEEEecchHHHHHHc
Q 008662 335 RELDDTLTAAVIRNLKIVQDRSKVIVMDADG---------TRSKGIARSLRKLGVMRAFLVQGGFQSWVKE 396 (558)
Q Consensus 335 ~~L~~ll~aaGI~~Lk~~~kdk~IVVyC~sG---------~RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaA 396 (558)
... + .++ ..++++||+||.+| .++..+++.|+..|| +|++|+|||.+|++.
T Consensus 83 ~~~-~--------~~~-~~~~~~IVvyc~~g~~~~~~~~~~~s~~a~~~L~~~G~-~v~~L~GG~~~W~~~ 142 (158)
T 3tg1_B 83 EGK-D--------SFK-RIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQN 142 (158)
T ss_dssp CSS-C--------SST-TTTTSCEEEECSCCSCTTSCCSSSHHHHHHHHHHTTTC-CEEEETTHHHHHTSS
T ss_pred HHH-H--------HHh-ccCCCeEEEEECCCCcccccCcchHHHHHHHHHHhCCC-cEEEeCCcHHHHHHH
Confidence 000 0 000 12478999999999 469999999999999 799999999999764
No 57
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.54 E-value=9e-15 Score=151.33 Aligned_cols=121 Identities=17% Similarity=0.248 Sum_probs=99.1
Q ss_pred CCcCHHHHHHHHhCC--CCcEEEEcC--------C-hhhH-hhCCCCCccccccccccccCcccccchhHhhhcCchhhh
Q 008662 271 GDLSPKSTLELLRGK--ENAVLIDVR--------H-EDLR-ERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELD 338 (558)
Q Consensus 271 g~ISp~Ea~elL~~~--~~avLIDVR--------s-~~Ef-~~GHIPGA~gai~~d~~nIPL~eL~~~l~ell~~~~~L~ 338 (558)
..|||+++.+++... ...++||++ . ..|| +++|||||+ ++|+.. +.+....+++++++++.|+
T Consensus 28 ~LIsp~~l~~ll~~~~~~rvv~lDasw~lP~~~r~~~~E~~~~~HIPGAv---~~Dld~--~~d~~~~~ph~LP~~~~f~ 102 (327)
T 3utn_X 28 DLISPKAFVKLVASEKVHRIVPVDATWYLPSWKLDNKVDFLTKPRIPNSI---FFDIDA--ISDKKSPYPHMFPTKKVFD 102 (327)
T ss_dssp EEECHHHHHHHHHHCSSSCEEEEECCCCCGGGCCCHHHHHHHSCBCTTCE---ECCTTT--SSCTTSSSTTCCCCHHHHH
T ss_pred cccCHHHHHHHHhCCCCCcEEEEEecCCCCCCCCCHHHHHHhhCcCCCCe---eeChHH--hcCCCCCCCCCCcCHHHHH
Confidence 479999999999632 347899985 2 4577 679999876 454432 2334456678899999999
Q ss_pred hHHHHHHHhhhcccCCCceEEEEeCCCc-hHHHHHHHHHHccCCCEEEecchHHHHHHcCCCeecc
Q 008662 339 DTLTAAVIRNLKIVQDRSKVIVMDADGT-RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKEL 403 (558)
Q Consensus 339 ~ll~aaGI~~Lk~~~kdk~IVVyC~sG~-RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaAGLPV~~~ 403 (558)
+.++++|| .++++||||++.|. .+.+++|+|+.+|+++|++|+|| .+|+++|+|+++.
T Consensus 103 ~~l~~lGI------~~d~~VVvYD~~~~~~AaR~wW~Lr~~Gh~~V~vLdGg-~aW~~~g~p~~~~ 161 (327)
T 3utn_X 103 DAMSNLGV------QKDDILVVYDRVGNFSSPRCAWTLGVMGHPKVYLLNNF-NQYREFKYPLDSS 161 (327)
T ss_dssp HHHHHTTC------CTTCEEEEECSSSSSSHHHHHHHHHHTTCSEEEEESCH-HHHHHTTCCCBCC
T ss_pred HHHHHcCC------CCCCEEEEEeCCCCcHHHHHHHHHHHcCCCceeecccH-HHHHHhCCCcccC
Confidence 99999999 58999999998765 78999999999999999999987 8999999999764
No 58
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.53 E-value=4.8e-15 Score=143.80 Aligned_cols=98 Identities=26% Similarity=0.234 Sum_probs=75.8
Q ss_pred CCCCcEEEEcCChhhHhhCCCCCccccccccccccCcc--cccc-hhHhhhcCchhhhhHHHHHHHhhhcccCCCceEEE
Q 008662 284 GKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLP--EVGG-SVKKLLRGGRELDDTLTAAVIRNLKIVQDRSKVIV 360 (558)
Q Consensus 284 ~~~~avLIDVRs~~Ef~~GHIPGA~gai~~d~~nIPL~--eL~~-~l~ell~~~~~L~~ll~aaGI~~Lk~~~kdk~IVV 360 (558)
.+++.+|||||++.||..||||||+ |+|+. ++.. ....++++++.+++.+..++ .+++||+
T Consensus 3 ~~~~~~iiDvR~~~ey~~ghIpgAi--------~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--------~~~~ivv 66 (230)
T 2eg4_A 3 LPEDAVLVDTRPRPAYEAGHLPGAR--------HLDLSAPKLRLREEAELKALEGGLTELFQTLG--------LRSPVVL 66 (230)
T ss_dssp CCTTCEEEECSCHHHHHHCBCTTCE--------ECCCCSCCCCCCSHHHHHHHHHHHHHHHHHTT--------CCSSEEE
T ss_pred CCCCEEEEECCChhhHhhCcCCCCE--------ECCccchhcccCCCCCcCCCHHHHHHHHHhcC--------CCCEEEE
Confidence 3467899999999999999999998 88876 4431 11223333344555444433 3889999
Q ss_pred EeCCCc-hHHHHHHHHHHccCCCEEEecchHHHHHHcCCCeecc
Q 008662 361 MDADGT-RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKEL 403 (558)
Q Consensus 361 yC~sG~-RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaAGLPV~~~ 403 (558)
||++|. +|..+++.|+ +||++|++|+|| |++ +|++..
T Consensus 67 yc~~g~~~s~~a~~~L~-~G~~~v~~l~GG---W~~--~p~~~~ 104 (230)
T 2eg4_A 67 YDEGLTSRLCRTAFFLG-LGGLEVQLWTEG---WEP--YATEKE 104 (230)
T ss_dssp ECSSSCHHHHHHHHHHH-HTTCCEEEECSS---CGG--GCCBCS
T ss_pred EcCCCCccHHHHHHHHH-cCCceEEEeCCC---Ccc--CcccCC
Confidence 999999 9999999999 999999999999 977 888654
No 59
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.53 E-value=2.3e-14 Score=148.25 Aligned_cols=164 Identities=17% Similarity=0.171 Sum_probs=109.7
Q ss_pred HHHHHHHHHhcCCCCCCCcchhhhhhhhHHHHHHHHHHHHhCCC-----------------C---C--------------
Q 008662 226 SVAIEGLERSLGFDPNDPIVPFVVFLGTSATLWIFYWWWTYGGY-----------------S---G-------------- 271 (558)
Q Consensus 226 ~~g~~gvdkrigf~~~~PVla~aI~~g~t~~L~l~y~~~~~~G~-----------------~---g-------------- 271 (558)
...++....++|+.++++||++--..+..+. =+||.+++.|+ . +
T Consensus 98 ~~~f~~~l~~lGI~~d~~VVvYD~~~~~~Aa--R~wW~Lr~~Gh~~V~vLdGg~aW~~~g~p~~~~~~~~~~p~p~~~~~ 175 (327)
T 3utn_X 98 KKVFDDAMSNLGVQKDDILVVYDRVGNFSSP--RCAWTLGVMGHPKVYLLNNFNQYREFKYPLDSSKVAAFSPYPKSHYE 175 (327)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECSSSSSSHH--HHHHHHHHTTCSEEEEESCHHHHHHTTCCCBCCCCSCSCSSCCCCCC
T ss_pred HHHHHHHHHHcCCCCCCEEEEEeCCCCcHHH--HHHHHHHHcCCCceeecccHHHHHHhCCCcccCCccCcCCcCCcccc
Confidence 3456677888999999999764322222111 14555443322 0 0
Q ss_pred ---------CcCHHHHHHHHhCC---CCcEEEEcCChhhHh-----------hCCCCCccccccccccccCcccccchhH
Q 008662 272 ---------DLSPKSTLELLRGK---ENAVLIDVRHEDLRE-----------RDGIPDLRRGARFRYASVYLPEVGGSVK 328 (558)
Q Consensus 272 ---------~ISp~Ea~elL~~~---~~avLIDVRs~~Ef~-----------~GHIPGA~gai~~d~~nIPL~eL~~~l~ 328 (558)
.++.+++.+.+.+. ++.+|||+|++++|. .||||||+ |+|+.++.+.-.
T Consensus 176 ~~~~~~~~~v~~~~~v~~~v~~~~~~~~~~lvDaRs~~rf~G~~~ep~~~~r~GHIPGA~--------nlP~~~~ld~~~ 247 (327)
T 3utn_X 176 SSESFQDKEIVDYEEMFQLVKSGELAKKFNAFDARSLGRFEGTEPEPRSDIPSGHIPGTQ--------PLPYGSLLDPET 247 (327)
T ss_dssp CSCCCHHHHEECHHHHHHHHHTTCHHHHCEEEECSCHHHHHTSSCCSSSSCCCCBCTTEE--------ECCGGGGSCTTT
T ss_pred cccccCchheecHHHHhhhhhcccccccceeeccCccceecccccCccccccCCCCCCCc--------ccChhhccCCCC
Confidence 14556677776532 246899999999995 58999999 999877654333
Q ss_pred hhhcC-chhhhhHHHHHHHhhhcccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcCCC
Q 008662 329 KLLRG-GRELDDTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLR 399 (558)
Q Consensus 329 ell~~-~~~L~~ll~aaGI~~Lk~~~kdk~IVVyC~sG~RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaAGLP 399 (558)
..++. .+.+...+.++.......++++++||+||.+|.++...+..|+.+||++|.+|+|+|..|....-|
T Consensus 248 ~~~~~~~e~l~~~l~~~~~~~~~gid~~k~vI~yCgsGvtA~~~~laL~~lG~~~v~lYdGSWsEW~~r~~p 319 (327)
T 3utn_X 248 KTYPEAGEAIHATLEKALKDFHCTLDPSKPTICSCGTGVSGVIIKTALELAGVPNVRLYDGSWTEWVLKSGP 319 (327)
T ss_dssp CCCCCTTHHHHHHHHHHHHHTTCCCCTTSCEEEECSSSHHHHHHHHHHHHTTCCSEEEESSHHHHHHHHHCG
T ss_pred CCCCCcHHHHHHHHHHHHHHhhcCCCCCCCEEEECChHHHHHHHHHHHHHcCCCCceeCCCcHHHhccccCC
Confidence 33332 233333444332111122478899999999999999999999999999999999999999875444
No 60
>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4
Probab=99.51 E-value=3e-14 Score=131.42 Aligned_cols=117 Identities=16% Similarity=0.247 Sum_probs=80.2
Q ss_pred CCCcCHHHHHHHHhCC-CCcEEEEcCChhhHhhCCCCCccccccccccccCcccccch-----hHhhhcCchhhhhHHHH
Q 008662 270 SGDLSPKSTLELLRGK-ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGS-----VKKLLRGGRELDDTLTA 343 (558)
Q Consensus 270 ~g~ISp~Ea~elL~~~-~~avLIDVRs~~Ef~~GHIPGA~gai~~d~~nIPL~eL~~~-----l~ell~~~~~L~~ll~a 343 (558)
...|+++++.+++.+. ++.+|||||+++||+.||||||+ |||+..+... +...+++ ...+++.+
T Consensus 14 ~~~i~~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~gai--------nip~~~~~~~~~~~~l~~~lp~--~~~~~~~~ 83 (157)
T 1whb_A 14 KGAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHSL--------SVPEEAISPGVTASWIEAHLPD--DSKDTWKK 83 (157)
T ss_dssp CSEECHHHHHHHHTCSSSCEEEEEESCHHHHHHCCBTTCE--------EECSSSCCTTCCHHHHHHSCCT--THHHHHHG
T ss_pred CCccCHHHHHHHHhcCCCCeEEEECCCHHHHHhccccCCc--------ccCHHHccCCCcHHHHHHHCCh--HHHHHHHh
Confidence 3579999999999532 27899999999999999999999 8998766432 2222221 11111111
Q ss_pred HHHhhhcccCCCceEEEEeCCCch----HHHHHHHHHH----c----cCC-CEEEecchHHHHHHcCCCeeccCc
Q 008662 344 AVIRNLKIVQDRSKVIVMDADGTR----SKGIARSLRK----L----GVM-RAFLVQGGFQSWVKEGLRIKELKS 405 (558)
Q Consensus 344 aGI~~Lk~~~kdk~IVVyC~sG~R----S~~AA~~L~~----~----Gf~-nVy~LdGG~~aWkaAGLPV~~~~~ 405 (558)
..+.+.||+||..|.+ +..+++.|.. . ||. +|++|+|||.+|++. +|.....+
T Consensus 84 --------~~~~~~VVvy~~~~~~~~~~a~~~~~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~~~~~~ 149 (157)
T 1whb_A 84 --------RGNVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQYTTNA 149 (157)
T ss_dssp --------GGTSSEEEEECSSCCGGGCCTTCHHHHHHHTTTTTCSSCCCSSCCEEESSCHHHHHHH-CGGGBSCC
T ss_pred --------cCCCCEEEEECCCCCccccccccHHHHHHHHHHHhccccccCCCeEEEcchHHHHHHH-ChhhhCCC
Confidence 1234569999998764 2445566652 2 454 499999999999985 88876544
No 61
>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4
Probab=99.50 E-value=3.6e-14 Score=131.36 Aligned_cols=115 Identities=18% Similarity=0.254 Sum_probs=78.1
Q ss_pred CCCcCHHHHHHHHhCC-CCcEEEEcCChhhHhhCCCCCccccccccccccCcccccch-----hHhhhcCchhhhhHHHH
Q 008662 270 SGDLSPKSTLELLRGK-ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGS-----VKKLLRGGRELDDTLTA 343 (558)
Q Consensus 270 ~g~ISp~Ea~elL~~~-~~avLIDVRs~~Ef~~GHIPGA~gai~~d~~nIPL~eL~~~-----l~ell~~~~~L~~ll~a 343 (558)
...|+++++.+++.+. ++.+|||||+++||+.||||||+ |||+..+... +...++ +.....+.
T Consensus 19 ~~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~gAi--------nip~~~l~~~~~~~~l~~~lp--~~~~~l~~- 87 (157)
T 2gwf_A 19 SGAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHSL--------SVPEEAISPGVTASWIEAHLP--DDSKDTWK- 87 (157)
T ss_dssp CCEECHHHHHHHHHSTTSCEEEEECSCHHHHHHSCBTTCE--------ECCGGGCCTTCCHHHHHHTSC--HHHHHHHH-
T ss_pred CCccCHHHHHHHHhcCCCCeEEEECCCHHHHHhcCccCCc--------ccCHHHcCCCCcHHHHHHHcC--HHHHHHHH-
Confidence 3579999999999643 27899999999999999999999 9998766432 222221 11111111
Q ss_pred HHHhhhcccCCCceEEEEeCCCch----HHHHHHHHH----Hc----cCC-CEEEecchHHHHHHcCCCeecc
Q 008662 344 AVIRNLKIVQDRSKVIVMDADGTR----SKGIARSLR----KL----GVM-RAFLVQGGFQSWVKEGLRIKEL 403 (558)
Q Consensus 344 aGI~~Lk~~~kdk~IVVyC~sG~R----S~~AA~~L~----~~----Gf~-nVy~LdGG~~aWkaAGLPV~~~ 403 (558)
...+.+.||+||..|.+ +..+++.|. +. ||. +|++|+|||.+|++. +|....
T Consensus 88 -------~~~~~~~VVvy~~~~~~~~~~a~~~l~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~~~~ 152 (157)
T 2gwf_A 88 -------KRGNVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQYTT 152 (157)
T ss_dssp -------TTTTSSEEEEECSSCCGGGCCTTCHHHHHHHHHHTSCCSSCCSSCCEEETTHHHHHHHH-CGGGBS
T ss_pred -------hcCCCCEEEEEcCCCCccccCcccHHHHHHHHHHhhccccccCCceEEEccHHHHHHHH-ChhhcC
Confidence 11234569999988764 234555554 22 454 499999999999984 887653
No 62
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.45 E-value=6.2e-15 Score=157.94 Aligned_cols=87 Identities=15% Similarity=0.129 Sum_probs=0.0
Q ss_pred HHHHHhCCCCcEEEEcCChhhHhhCCCCCccccccccccccCcccccchhHhhhcCchhhhhHHHHHHHhhhcccCCCce
Q 008662 278 TLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKIVQDRSK 357 (558)
Q Consensus 278 a~elL~~~~~avLIDVRs~~Ef~~GHIPGA~gai~~d~~nIPL~eL~~~l~ell~~~~~L~~ll~aaGI~~Lk~~~kdk~ 357 (558)
+.+++. +++.+|||||++.||..||||||+ |+|+.++.+.+.+ ++++++
T Consensus 379 ~~~~~~-~~~~~liDvR~~~e~~~ghIpgA~--------~ip~~~l~~~~~~----------------------l~~~~~ 427 (466)
T 3r2u_A 379 HSEDIT-GNESHILDVRNDNEWNNGHLSQAV--------HVPHGKLLETDLP----------------------FNKNDV 427 (466)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHh-CCCcEEEEeCCHHHHhcCcCCCCE--------ECCHHHHHHHHhh----------------------CCCCCe
Confidence 344443 457899999999999999999999 9999887655432 367899
Q ss_pred EEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHH
Q 008662 358 VIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVK 395 (558)
Q Consensus 358 IVVyC~sG~RS~~AA~~L~~~Gf~nVy~LdGG~~aWka 395 (558)
||+||++|.||..+++.|+.+||++|++|+|||.+|++
T Consensus 428 iv~~C~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~ 465 (466)
T 3r2u_A 428 IYVHCQSGIRSSIAIGILEHKGYHNIINVNEGYKDIQL 465 (466)
T ss_dssp --------------------------------------
T ss_pred EEEECCCChHHHHHHHHHHHcCCCCEEEecChHHHHhh
Confidence 99999999999999999999999999999999999975
No 63
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.35 E-value=5.4e-13 Score=142.39 Aligned_cols=102 Identities=16% Similarity=0.154 Sum_probs=84.1
Q ss_pred CCcCHHHHHHHHhCCCCcEEEEcCChhhHhhCCCCCccccccccccccCccc-ccchhHhhhcCchhhhhHHHHHHHhhh
Q 008662 271 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPE-VGGSVKKLLRGGRELDDTLTAAVIRNL 349 (558)
Q Consensus 271 g~ISp~Ea~elL~~~~~avLIDVRs~~Ef~~GHIPGA~gai~~d~~nIPL~e-L~~~l~ell~~~~~L~~ll~aaGI~~L 349 (558)
..|+++++.+++.+ + +|||+|++.||..||||||+ |+|+.. +...+.++
T Consensus 273 ~~is~~~l~~~l~~--~-~iiD~R~~~~y~~ghIpGA~--------~i~~~~~~~~~~~~l------------------- 322 (474)
T 3tp9_A 273 VDLPPERVRAWREG--G-VVLDVRPADAFAKRHLAGSL--------NIPWNKSFVTWAGWL------------------- 322 (474)
T ss_dssp CCCCGGGHHHHHHT--S-EEEECSCHHHHHHSEETTCE--------ECCSSTTHHHHHHHH-------------------
T ss_pred ceeCHHHHHHHhCC--C-EEEECCChHHHhccCCCCeE--------EECcchHHHHHHHhc-------------------
Confidence 57999999999964 4 99999999999999999999 888753 33333222
Q ss_pred cccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcCCCeeccCc
Q 008662 350 KIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 405 (558)
Q Consensus 350 k~~~kdk~IVVyC~sG~RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaAGLPV~~~~~ 405 (558)
.+++++||+||..|. +..+++.|+.+||++|+.+.+|+.+|+.+|+|+.....
T Consensus 323 --~~~~~~vvvy~~~~~-~~~~~~~L~~~G~~~v~~~l~G~~~W~~~g~~~~~~~~ 375 (474)
T 3tp9_A 323 --LPADRPIHLLAADAI-APDVIRALRSIGIDDVVDWTDPAAVDRAAPDDVASYAN 375 (474)
T ss_dssp --CCSSSCEEEECCTTT-HHHHHHHHHHTTCCCEEEEECGGGGTTCCGGGEECCEE
T ss_pred --CCCCCeEEEEECCCc-HHHHHHHHHHcCCcceEEecCcHHHHHhcccccccccc
Confidence 257889999999887 55699999999999999977799999999999877543
No 64
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=98.86 E-value=2e-09 Score=115.35 Aligned_cols=112 Identities=8% Similarity=-0.017 Sum_probs=60.9
Q ss_pred CCcEEEEcCChhhHhhCCCCCccccccccccccCccc-ccchhHhhhcCchhhhhHHHHHHHhhhcccCCCceEEEEeCC
Q 008662 286 ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPE-VGGSVKKLLRGGRELDDTLTAAVIRNLKIVQDRSKVIVMDAD 364 (558)
Q Consensus 286 ~~avLIDVRs~~Ef~~GHIPGA~gai~~d~~nIPL~e-L~~~l~ell~~~~~L~~ll~aaGI~~Lk~~~kdk~IVVyC~s 364 (558)
++.+|||+|++.+|..||||||+ |+|+.. +.....++ .+++++||+||.
T Consensus 295 ~~~~ilD~R~~~~y~~gHIpGAv--------~ip~~~~~~~~~~~~---------------------~~~~~~vvly~~- 344 (466)
T 3r2u_A 295 TNRLTFDLRSKEAYHGGHIEGTI--------NIPYDKNFINQIGWY---------------------LNYDQEINLIGD- 344 (466)
T ss_dssp CCSEEEECSCHHHHHHSCCTTCE--------ECCSSTTHHHHHTTT---------------------CCTTSCEEEESC-
T ss_pred CCeEEEECCCHHHHhhCCCCCcE--------ECCccHHHHHHHHhc---------------------cCCCCeEEEEEC-
Confidence 57899999999999999999999 888753 33332221 267899999999
Q ss_pred CchHHHHHHHHHHccCCCEEE-ecchHHHHHHcCCCeeccCccchhhhhhhhHHHHHhhhcCccchhhhhhchhh
Q 008662 365 GTRSKGIARSLRKLGVMRAFL-VQGGFQSWVKEGLRIKELKSETALTILNEDAEAILEDINSSPVQFLGFGVGCF 438 (558)
Q Consensus 365 G~RS~~AA~~L~~~Gf~nVy~-LdGG~~aWkaAGLPV~~~~~~~~lel~~e~~~~I~~qV~~~~l~llG~~~G~~ 438 (558)
+.++..+++.|+.+||++|+. ++|+...|.... ..+.+.+ ...++-+++.......|++-|.+
T Consensus 345 ~~~a~~a~~~L~~~G~~~v~~~l~g~~~~~~~~~----------~~~~~~~-~~~~liDvR~~~e~~~ghIpgA~ 408 (466)
T 3r2u_A 345 YHLVSKATHTLQLIGYDDIAGYQLPQSKIQTRSI----------HSEDITG-NESHILDVRNDNEWNNGHLSQAV 408 (466)
T ss_dssp HHHHHHHHHHHHTTTCCCEEEEECCC-------------------------------------------------
T ss_pred CchHHHHHHHhhhhhcccccccccCcccccHHHH----------HHHHHhC-CCcEEEEeCCHHHHhcCcCCCCE
Confidence 668999999999999999997 666655444221 1111111 11223355555555677887733
No 65
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.15 E-value=2.7e-07 Score=97.67 Aligned_cols=114 Identities=12% Similarity=0.015 Sum_probs=83.6
Q ss_pred hhhhHhhhHHHHHHHhhccccccccccccccccc---eeccccchhhhhhhhccceeeeehhchhcccceeccCCceeeE
Q 008662 110 SLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSK---LTNFSTDLKEASSKATVAAVDVLRNTIVALEESMTNGASFVVY 186 (558)
Q Consensus 110 ~~~~a~~~~r~~~d~~~~g~~~~~~~~~~~~~~~---~t~astgl~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 186 (558)
....|.+|||.+|+|++ |....+.+...+.+.+ ...+++|++|+.+++.|++|.+ ......+++.|
T Consensus 311 ~~~~A~~~g~~aa~~i~-g~~~~~~~~~~~~~~~~~~~~~a~vG~~e~~a~~~g~~~~~----------~~~~~~~~~~~ 379 (472)
T 3iwa_A 311 LGSMANRQGRVIGTNLA-DGDATFPGAVGSWAVKLFEGSASGAGLTVEGALREGYDAVN----------VHVEQFDRAHF 379 (472)
T ss_dssp CTTHHHHHHHHHHHHHT-TCCCCCCCBCCCEEEECSSCEEEEEECCHHHHHHTTCCEEE----------EEEEC------
T ss_pred hHHHHHHHHHHHHHHhc-CCCccCCCCCcceEEEECCceeEEEECCHHHHHHcCCceEE----------EEEecCCccCc
Confidence 46689999999999999 4677788888877655 6689999999999999999877 34456678889
Q ss_pred ccCCCccCCChhHHHhhhhhhhhcceee-ccccchhhHHHHHHH--HHHHHhcCCCCCCCcchhhhhhhhHHH
Q 008662 187 YYGTTKESLPPEIRDALNLYEDRAVKLW-RPVGSALQQQVSVAI--EGLERSLGFDPNDPIVPFVVFLGTSAT 256 (558)
Q Consensus 187 ~pg~~~~~l~p~ik~~~~~~~~~~k~i~-~~~G~ilgaQv~~g~--~gvdkrigf~~~~PVla~aI~~g~t~~ 256 (558)
|||..+..+ |+|+ +.+|++||+| ++|- +++..+|+ .++.++..+.+..
T Consensus 380 ~~~~~~~~~---------------kli~~~~~~~ilG~~-~~g~~~~~~~~~i~------~~~~ai~~~~t~~ 430 (472)
T 3iwa_A 380 YPEKTIMTL---------------QLVVDRPTRRVLGIQ-GFSTLGDALTARIN------AVATMLASKPTVE 430 (472)
T ss_dssp -----CEEE---------------EEEEETTTCBEEEEE-EEESCHHHHHHHHH------HHHHHHTTCCBHH
T ss_pred cCCCceEEE---------------EEEEECCCCEEEEEE-EECCCcccHHHHHH------HHHHHHHcCCCHH
Confidence 999888877 9999 6899999999 7777 67777888 7676777666653
No 66
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.10 E-value=2.3e-07 Score=98.08 Aligned_cols=112 Identities=13% Similarity=0.125 Sum_probs=85.9
Q ss_pred hhhhHhhhHHHHHHHhhccccccccccccccccc---eeccccchhhhhhhhccceeeeehhchhcccceeccCCceeeE
Q 008662 110 SLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSK---LTNFSTDLKEASSKATVAAVDVLRNTIVALEESMTNGASFVVY 186 (558)
Q Consensus 110 ~~~~a~~~~r~~~d~~~~g~~~~~~~~~~~~~~~---~t~astgl~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 186 (558)
....|.+|||.+|+|++|+....+.+...+.... ...+++|++|+.+++.++. + ......++..|
T Consensus 293 ~a~~A~~~g~~~a~ni~g~~~~~~~~~~~~~~~~~~~p~ia~vGlte~~a~~~~~~--~----------~~~~~~~~~~~ 360 (437)
T 4eqs_A 293 LAWGAHRAASIVAEQIAGNDTIEFKGFLGNNIVKFFDYTFASVGVKPNELKQFDYK--M----------VEVTQGAHANY 360 (437)
T ss_dssp SHHHHHHHHHHHHHHHHSCTTCCCCCBCCCEEEEETTEEEEEEESCGGGGGGSCEE--E----------EEEEEESSCTT
T ss_pred hHHHHHHHHHHHHHHHcCCCCcccccceeEEeeeeccceEEEeeCCHHHHHhCCce--E----------EEEecCCchhh
Confidence 4678999999999999975556788888888777 6699999999999887754 3 22344567788
Q ss_pred ccCCCccCCChhHHHhhhhhhhhcceee-ccccchhhHHHHHHHHHHHHhcCCCCCCCcchhhhhhhhHH
Q 008662 187 YYGTTKESLPPEIRDALNLYEDRAVKLW-RPVGSALQQQVSVAIEGLERSLGFDPNDPIVPFVVFLGTSA 255 (558)
Q Consensus 187 ~pg~~~~~l~p~ik~~~~~~~~~~k~i~-~~~G~ilgaQv~~g~~gvdkrigf~~~~PVla~aI~~g~t~ 255 (558)
|+|..+..+ |+|+ +.+|++||+| ++|-++...+|. .++++|..+++.
T Consensus 361 ~~~~~~g~~---------------Kli~d~~~~~ilGa~-~~g~~~a~e~i~------~~~~ai~~~~t~ 408 (437)
T 4eqs_A 361 YPGNSPLHL---------------RVYYDTSNRQILRAA-AVGKEGADKRID------VLSMAMMNQLTV 408 (437)
T ss_dssp SSSCCEEEE---------------EEEEETTTCBEEEEE-EEESSSHHHHHH------HHHHHHHTTCBG
T ss_pred cCCCCcEEE---------------EEEEECCCCEEEEEE-EECcCCHHHHHH------HHHHHHHcCCcH
Confidence 999988877 9999 7889999999 666655666666 555555555544
No 67
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.98 E-value=5.2e-07 Score=94.88 Aligned_cols=113 Identities=16% Similarity=0.074 Sum_probs=86.8
Q ss_pred hhhhhHhhhHHHHHHHhhccccccccccccccccc---eeccccchhhhhhhhccceeeeehhchhcccceeccCCceee
Q 008662 109 SSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSK---LTNFSTDLKEASSKATVAAVDVLRNTIVALEESMTNGASFVV 185 (558)
Q Consensus 109 ~~~~~a~~~~r~~~d~~~~g~~~~~~~~~~~~~~~---~t~astgl~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (558)
.....|.+|||.+|+|++ |....+++.......+ ...+++|++|+.+++.|++|.+ ......+++.
T Consensus 296 ~l~~~A~~~g~~aa~~i~-g~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~g~~~~~----------~~~~~~~~~~ 364 (449)
T 3kd9_A 296 PLAPAGNKMGYVAGSNIA-GKELHFPGVLGTAVTKFMDVEIGKTGLTEMEALKEGYDVRT----------AFIKASTRPH 364 (449)
T ss_dssp CCHHHHHHHHHHHHHHHT-TCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCEEE----------EEEEEESSCT
T ss_pred ccHHHHHHHHHHHHHHhc-CCCccCCCcccceEEEEcCcEEEEecCCHHHHHHCCCceEE----------EEEecCCccc
Confidence 356789999999999999 5777788877776655 6689999999999999998777 3334566788
Q ss_pred EccCCCccCCChhHHHhhhhhhhhcceee-ccccchhhHHHHHHHHHHHHhcCCCCCCCcchhhhhhhhHH
Q 008662 186 YYYGTTKESLPPEIRDALNLYEDRAVKLW-RPVGSALQQQVSVAIEGLERSLGFDPNDPIVPFVVFLGTSA 255 (558)
Q Consensus 186 y~pg~~~~~l~p~ik~~~~~~~~~~k~i~-~~~G~ilgaQv~~g~~gvdkrigf~~~~PVla~aI~~g~t~ 255 (558)
||||.....+ |+|+ +.+|++||+| ++|-+ ...+|+ .+++++..+.+.
T Consensus 365 ~~~~~~~~~~---------------kli~~~~~~~ilG~~-~~g~~-a~e~i~------~~~~ai~~~~t~ 412 (449)
T 3kd9_A 365 YYPGGREIWL---------------KGVVDNETNRLLGVQ-VVGSD-ILPRID------TAAAMLMAGFTT 412 (449)
T ss_dssp TSTTCCEEEE---------------EEEEETTTCBEEEEE-EEESS-CHHHHH------HHHHHHHTTCBH
T ss_pred cCCCCceEEE---------------EEEEECCCCEEEEEE-EEChH-HHHHHH------HHHHHHHcCCcH
Confidence 8889888777 9999 6789999999 65654 555566 555555555554
No 68
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.52 E-value=1.1e-05 Score=85.84 Aligned_cols=126 Identities=9% Similarity=-0.027 Sum_probs=86.7
Q ss_pred hhhhhhHHHhhHhhhhhhhhhHhhhHHHHHHHhhccccccccc-cccccccc-eeccccchhhhhhhhccceeeeehhch
Q 008662 93 MIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQ-TGGSAGSK-LTNFSTDLKEASSKATVAAVDVLRNTI 170 (558)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~a~~~~r~~~d~~~~g~~~~~~~-~~~~~~~~-~t~astgl~e~~~~~~~~~~~~~~~~~ 170 (558)
|+-++++... ...+..|++|||.+|++++| ....++. .+.+.+.- ...+++||+|+.+++.|++|.+.+
T Consensus 333 IyA~GD~~~~-----~~~~~~A~~~g~~aa~~i~g-~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~g~~~~~~~--- 403 (491)
T 3urh_A 333 VYAIGDVVRG-----PMLAHKAEDEGVAVAEIIAG-QAGHVNYDVIPGVVYTQPEVASVGKTEEELKAAGVAYKIGK--- 403 (491)
T ss_dssp EEECGGGSSS-----CCCHHHHHHHHHHHHHHHTT-SCCCCCTTCCCEEECSSSCEEEEECCHHHHHHTTCCEEEEE---
T ss_pred EEEEEecCCC-----ccchhHHHHHHHHHHHHHcC-CCcccCCCCCCEEEEccCCeEEEeCCHHHHHhCCCCEEEEE---
Confidence 5555665421 24577899999999999995 5555542 33333322 678999999999999999988721
Q ss_pred hcccceeccCCceeeEccCCCccCCChhHHHhhhhhhhhcceee-ccccchhhHHHHHHHHHHHHhcCCCCCCCcchhhh
Q 008662 171 VALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLW-RPVGSALQQQVSVAIEGLERSLGFDPNDPIVPFVV 249 (558)
Q Consensus 171 ~~~~~~~~~~~~~~~y~pg~~~~~l~p~ik~~~~~~~~~~k~i~-~~~G~ilgaQv~~g~~gvdkrigf~~~~PVla~aI 249 (558)
.-.....++.|+ |..+..+ |+|+ +.+|++||+| ++|-+ ...+|+ .++++|
T Consensus 404 -----~~~~~~~~~~~~-~~~~g~~---------------k~i~~~~~~~ilG~~-~~g~~-a~e~i~------~~~~ai 454 (491)
T 3urh_A 404 -----FPFTANGRARAM-LQTDGFV---------------KILADKETDRVLGGH-IIGFG-AGEMIH------EIAVLM 454 (491)
T ss_dssp -----EEGGGCHHHHHT-TCCCCEE---------------EEEEETTTCBEEEEE-EESTT-HHHHHH------HHHHHH
T ss_pred -----EecCcchhhhcC-CCCcEEE---------------EEEEECCCCEEEEEE-EECCC-HHHHHH------HHHHHH
Confidence 112234455554 6666767 8899 6799999999 77764 566777 777777
Q ss_pred hhhhHHH
Q 008662 250 FLGTSAT 256 (558)
Q Consensus 250 ~~g~t~~ 256 (558)
..+.+..
T Consensus 455 ~~~~t~~ 461 (491)
T 3urh_A 455 EFGGSSE 461 (491)
T ss_dssp HTTCBHH
T ss_pred HCCCcHH
Confidence 7766653
No 69
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.44 E-value=1.6e-05 Score=84.03 Aligned_cols=126 Identities=5% Similarity=-0.071 Sum_probs=85.9
Q ss_pred hhhhhhHHHhhHhhhhhhhhhHhhhHHHHHHHhhcccccc-ccccccccccc-eeccccchhhhhhhhccceeeeehhch
Q 008662 93 MIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSS-IDQTGGSAGSK-LTNFSTDLKEASSKATVAAVDVLRNTI 170 (558)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~a~~~~r~~~d~~~~g~~~~-~~~~~~~~~~~-~t~astgl~e~~~~~~~~~~~~~~~~~ 170 (558)
|+-++++.. .......|.+|||.+|+|++|+.... ....+.+.+.. ...+++|++|+.+++.|++|.+
T Consensus 301 iya~GD~~~-----~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~p~~a~vG~te~~a~~~~~~~~~----- 370 (463)
T 4dna_A 301 IYALGDVTD-----RVQLTPVAIHEAMCFIETEYKNNPTSPDHDLIATAVFSQPEIGTVGITEEEAARKFQEIEV----- 370 (463)
T ss_dssp EEECSGGGS-----SCCCHHHHHHHHHHHHHHHHSSCCCCCCCSCCCEEECSSSCEEEEECCHHHHHHHSSEEEE-----
T ss_pred EEEEEecCC-----CCCChHHHHHHHHHHHHHHcCCCCcccCCCCCCEEEECCCCeEEecCCHHHHHHcCCCeEE-----
Confidence 555666543 22345679999999999999643321 22334444443 6689999999999999988777
Q ss_pred hcccceeccCCceeeEccCCCccCCChhHHHhhhhhhhhcceee-ccccchhhHHHHHHHHHHHHhcCCCCCCCcchhhh
Q 008662 171 VALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLW-RPVGSALQQQVSVAIEGLERSLGFDPNDPIVPFVV 249 (558)
Q Consensus 171 ~~~~~~~~~~~~~~~y~pg~~~~~l~p~ik~~~~~~~~~~k~i~-~~~G~ilgaQv~~g~~gvdkrigf~~~~PVla~aI 249 (558)
++..+ .+..+ .|++|..+..+ |+|+ +.+|++||+| ++|- +..++|+ .+++++
T Consensus 371 --~~~~~-~~~~~-~~~~~~~~~~~---------------k~~~~~~~~~ilG~~-~~g~-~a~~~i~------~~~~ai 423 (463)
T 4dna_A 371 --YRAEF-RPMKA-TLSGRKEKTIM---------------KLVVNAADRKVVGAH-ILGH-DAGEMAQ------LLGISL 423 (463)
T ss_dssp --EEEEE-CCTTH-HHHCCCCCEEE---------------EEEEETTTCBEEEEE-EEST-THHHHHH------HHHHHH
T ss_pred --EEEec-cccch-hhcCCCceEEE---------------EEEEECCCCEEEEEE-EECC-CHHHHHH------HHHHHH
Confidence 22222 23333 36789888878 9999 6899999999 6664 4677777 666555
Q ss_pred hhhhHH
Q 008662 250 FLGTSA 255 (558)
Q Consensus 250 ~~g~t~ 255 (558)
..+.+.
T Consensus 424 ~~~~t~ 429 (463)
T 4dna_A 424 RAGCTK 429 (463)
T ss_dssp HTTCBH
T ss_pred HCCCCH
Confidence 555544
No 70
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.40 E-value=7.3e-06 Score=86.32 Aligned_cols=111 Identities=8% Similarity=-0.013 Sum_probs=77.0
Q ss_pred hhhhHhhhHHHHHHHhhcccccccccccccc---ccceeccccchhhhhhhhccceeeeehhchhcccceeccCCceeeE
Q 008662 110 SLTSIKKSTSEAVDNVVSRVFSSIDQTGGSA---GSKLTNFSTDLKEASSKATVAAVDVLRNTIVALEESMTNGASFVVY 186 (558)
Q Consensus 110 ~~~~a~~~~r~~~d~~~~g~~~~~~~~~~~~---~~~~t~astgl~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 186 (558)
.+..|.+|||.+|+|++| ....+.+..... +.....+++|++|+.+++.|++|.+. .....++.
T Consensus 296 ~~~~A~~~g~~aa~~i~g-~~~~~~~~~~~~~~~~~~~~~a~vG~te~~a~~~g~~~~~~----------~~~~~~~~-- 362 (452)
T 3oc4_A 296 LVNNAVRTGLVVANNLEE-KTHRFIGSLRTMGTKVGDYYLASTGLTETEGLFFPQTLASI----------IVRQPAPP-- 362 (452)
T ss_dssp CHHHHHHHHHHHTTSSSS-CCCCCCCCCCCEEEEETTEEEEEEECCSGGGGGSSSCEEEE----------EEEEECTT--
T ss_pred hHHHHHHHHHHHHHHhcC-CCccCCCccccEEEEEcCeeEEEecCCHHHHHHCCCceEEE----------EEecCCcc--
Confidence 567899999999999995 555665544433 33367899999999999999988772 22112222
Q ss_pred ccCCCccCCChhHHHhhhhhhhhcceee-ccccchhhHHHHHHHHHHHHhcCCCCCCCcchhhhhhhhHH
Q 008662 187 YYGTTKESLPPEIRDALNLYEDRAVKLW-RPVGSALQQQVSVAIEGLERSLGFDPNDPIVPFVVFLGTSA 255 (558)
Q Consensus 187 ~pg~~~~~l~p~ik~~~~~~~~~~k~i~-~~~G~ilgaQv~~g~~gvdkrigf~~~~PVla~aI~~g~t~ 255 (558)
++|..+..+ |+|+ +.+|++||+| ++|-.+...+|+ .++.++..+.+.
T Consensus 363 ~~~~~~~~~---------------kli~~~~~~~ilG~~-~~g~~~a~e~i~------~~~~ai~~~~t~ 410 (452)
T 3oc4_A 363 LQHGTEILG---------------KLIYDKVTQRVLGAQ-LCSKNNCLEKIN------TLALSIQTGQTL 410 (452)
T ss_dssp TTCSCEEEE---------------EEEEETTTCBEEEEE-EEESSCCTHHHH------HHHHHHHTTCBH
T ss_pred CCCCCeEEE---------------EEEEECCCCEEEEEE-EEeCCCHHHHHH------HHHHHHHcCCCH
Confidence 677766766 8899 6789999998 555433445555 555555555554
No 71
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.31 E-value=2.2e-05 Score=83.03 Aligned_cols=126 Identities=10% Similarity=-0.052 Sum_probs=85.1
Q ss_pred hhhhhhHHHhhHhhhhhhhhhHhhhHHHHHHHhhccccccccc-cccccccc-eeccccchhhhhhhhccceeeeehhch
Q 008662 93 MIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQ-TGGSAGSK-LTNFSTDLKEASSKATVAAVDVLRNTI 170 (558)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~a~~~~r~~~d~~~~g~~~~~~~-~~~~~~~~-~t~astgl~e~~~~~~~~~~~~~~~~~ 170 (558)
|+-++++.. -...+..|++|||.+|++++| ....++. .+.+.+.- ...+++||+|+.+++.|++|.+.+
T Consensus 313 Iya~GD~~~-----~~~~~~~A~~~g~~aa~~i~g-~~~~~~~~~~p~~~~~~~~~a~vGlte~~a~~~g~~~~~~~--- 383 (476)
T 3lad_A 313 VYAIGDVVR-----GAMLAHKASEEGVVVAERIAG-HKAQMNYDLIPAVIYTHPEIAGVGKTEQALKAEGVAINVGV--- 383 (476)
T ss_dssp EEECGGGSS-----SCCCHHHHHHHHHHHHHHHHH-CCCCCCTTCCCEEECSSSEEEEEECCHHHHHHTTCCEEEEE---
T ss_pred EEEEEccCC-----CcccHHHHHHHHHHHHHHhcC-CCcccCCCCCCEEEECcCCEEEeeCCHHHHHhcCCCEEEEE---
Confidence 555666552 122467899999999999995 5554443 22322222 668999999999999999987711
Q ss_pred hcccceeccCCceeeEccCCCccCCChhHHHhhhhhhhhcceee-ccccchhhHHHHHHHHHHHHhcCCCCCCCcchhhh
Q 008662 171 VALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLW-RPVGSALQQQVSVAIEGLERSLGFDPNDPIVPFVV 249 (558)
Q Consensus 171 ~~~~~~~~~~~~~~~y~pg~~~~~l~p~ik~~~~~~~~~~k~i~-~~~G~ilgaQv~~g~~gvdkrigf~~~~PVla~aI 249 (558)
.-.....++.|+ |..+..+ |+|+ +.+|++||+| ++|-+ ...+|+ .+++++
T Consensus 384 -----~~~~~~~~~~~~-~~~~~~~---------------k~~~~~~~~~ilG~~-~~g~~-a~~~i~------~~~~ai 434 (476)
T 3lad_A 384 -----FPFAASGRAMAA-NDTAGFV---------------KVIADAKTDRVLGVH-VIGPS-AAELVQ------QGAIAM 434 (476)
T ss_dssp -----EEGGGCHHHHHH-TCCCCEE---------------EEEEETTTCBEEEEE-EEETT-HHHHHH------HHHHHH
T ss_pred -----Eeccccchheec-CCCcEEE---------------EEEEECCCCEEEEEE-EECCC-HHHHHH------HHHHHH
Confidence 111233444444 5566666 8899 6899999999 77754 566777 777777
Q ss_pred hhhhHHH
Q 008662 250 FLGTSAT 256 (558)
Q Consensus 250 ~~g~t~~ 256 (558)
..+.+..
T Consensus 435 ~~~~t~~ 441 (476)
T 3lad_A 435 EFGTSAE 441 (476)
T ss_dssp HHTCBHH
T ss_pred HCCCcHH
Confidence 7776663
No 72
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.29 E-value=2.4e-05 Score=83.20 Aligned_cols=126 Identities=6% Similarity=-0.108 Sum_probs=83.1
Q ss_pred hhhhhhHHHhhHhhhhhhhhhHhhhHHHHHHHhhcccccc-ccccccccccc-eeccccchhhhhhhhccceeeeehhch
Q 008662 93 MIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSS-IDQTGGSAGSK-LTNFSTDLKEASSKATVAAVDVLRNTI 170 (558)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~a~~~~r~~~d~~~~g~~~~-~~~~~~~~~~~-~t~astgl~e~~~~~~~~~~~~~~~~~ 170 (558)
|+-++++.. ....+..|++|||.+|++++|+.... ....+.+.+.. ...+++||+|+.+++.|.+|++
T Consensus 321 Iya~GD~~~-----~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~g~~~~~----- 390 (484)
T 3o0h_A 321 IWAVGDVTG-----HIQLTPVAIHDAMCFVKNAFENTSTTPDYDLITTAVFSQPEIGTVGLSEEDALHRYKRVEI----- 390 (484)
T ss_dssp EEECGGGGT-----SCCCHHHHHHHHHHHHHHHHC---CCCCCTTCCEEECCSSCEEEEECCHHHHHHHCSEEEE-----
T ss_pred EEEEEecCC-----CCcCHHHHHHHHHHHHHHHcCCCCCcCCCCCCcEEEECCCCEEEeeCCHHHHHHcCCCEEE-----
Confidence 555666543 12445679999999999999643322 12334444444 6689999999999999988777
Q ss_pred hcccceeccCCceeeEccCCCccCCChhHHHhhhhhhhhcceee-ccccchhhHHHHHHHHHHHHhcCCCCCCCcchhhh
Q 008662 171 VALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLW-RPVGSALQQQVSVAIEGLERSLGFDPNDPIVPFVV 249 (558)
Q Consensus 171 ~~~~~~~~~~~~~~~y~pg~~~~~l~p~ik~~~~~~~~~~k~i~-~~~G~ilgaQv~~g~~gvdkrigf~~~~PVla~aI 249 (558)
++..+ .+..+ .+++|.....+ |+|+ +.+|++||+| ++|- +..++|+ .+++++
T Consensus 391 --~~~~~-~~~~~-~~~~~~~~~~~---------------k~~~~~~~~~ilG~~-~~g~-~a~~~i~------~~~~ai 443 (484)
T 3o0h_A 391 --YRTVF-RPMRN-VLSGSPEKMFM---------------KLVVDGESRIVVGAH-VLGE-NAGEIAQ------LIGISL 443 (484)
T ss_dssp --EEEEE-CCHHH-HHHTCCCCEEE---------------EEEEETTTCBEEEEE-EEST-THHHHHH------HHHHHH
T ss_pred --EEecC-Ccchh-hccCCCCcEEE---------------EEEEECCCCEEEEEE-EECc-CHHHHHH------HHHHHH
Confidence 22222 12223 36788888877 9999 6899999999 6664 4566666 555455
Q ss_pred hhhhHH
Q 008662 250 FLGTSA 255 (558)
Q Consensus 250 ~~g~t~ 255 (558)
..+++.
T Consensus 444 ~~~~t~ 449 (484)
T 3o0h_A 444 KGKLTK 449 (484)
T ss_dssp HTTCBH
T ss_pred HCCCCH
Confidence 544443
No 73
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.21 E-value=3.5e-05 Score=81.54 Aligned_cols=126 Identities=10% Similarity=0.044 Sum_probs=83.9
Q ss_pred hhhhhhHHHhhHhhhhhhhhhHhhhHHHHHHHhhcc--cccccc-cccccccc-ceeccccchhhhhhhhccceeeeehh
Q 008662 93 MIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSR--VFSSID-QTGGSAGS-KLTNFSTDLKEASSKATVAAVDVLRN 168 (558)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~a~~~~r~~~d~~~~g--~~~~~~-~~~~~~~~-~~t~astgl~e~~~~~~~~~~~~~~~ 168 (558)
|+-++++... ...+..|++|||.+|+|++|+ ....++ ..+...+. ....+++|++|+.+++.|++|.+
T Consensus 303 Iya~GD~~~~-----~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~g~~~~~--- 374 (466)
T 3l8k_A 303 VFATGDANGL-----APYYHAAVRMSIAAANNIMANGMPVDYVDVKSIPVTIYTIPSLSYVGILPSKARKMGIEIVE--- 374 (466)
T ss_dssp EEECGGGTCS-----CCSHHHHHHHHHHHHHHHHTTTSCCCCCCSTTSCEEECSSSCEEEEECCHHHHHHHTCCEEE---
T ss_pred EEEEEecCCC-----CccHhHHHHHHHHHHHHHhCCCCCccccCCCCCcEEEECCCCeEEecCCHHHHHhCCCCEEE---
Confidence 5556665532 345678999999999999964 222221 12222222 25689999999999999999887
Q ss_pred chhcccceeccCCce-eeEccCCCccCCChhHHHhhhhhhhhcceee-ccccchhhHHHHHHHHHHHHhcCCCCCCCcch
Q 008662 169 TIVALEESMTNGASF-VVYYYGTTKESLPPEIRDALNLYEDRAVKLW-RPVGSALQQQVSVAIEGLERSLGFDPNDPIVP 246 (558)
Q Consensus 169 ~~~~~~~~~~~~~~~-~~y~pg~~~~~l~p~ik~~~~~~~~~~k~i~-~~~G~ilgaQv~~g~~gvdkrigf~~~~PVla 246 (558)
....-.+. -.+++|..+..+ |+|+ +.+|++||+| ++|-+ ...+|+ .++
T Consensus 375 -------~~~~~~~~~~~~~~~~~~g~~---------------k~i~~~~~~~ilG~~-~~g~~-a~e~i~------~~~ 424 (466)
T 3l8k_A 375 -------AEYNMEEDVSAQIYGQKEGVL---------------KLIFERGSMRLIGAW-MIGVH-SQYLIN------ELG 424 (466)
T ss_dssp -------EEEEGGGSHHHHHHTCCCCEE---------------EEEEETTTCBEEEEE-EESTT-HHHHHH------HHH
T ss_pred -------EEEEcccChhheecCCCeEEE---------------EEEEECCCCEEEEEE-EECCC-HHHHHH------HHH
Confidence 22211111 124567777777 8899 6789999999 77764 455777 777
Q ss_pred hhhhhhhHHH
Q 008662 247 FVVFLGTSAT 256 (558)
Q Consensus 247 ~aI~~g~t~~ 256 (558)
+++..+.+..
T Consensus 425 ~ai~~~~t~~ 434 (466)
T 3l8k_A 425 LAVAYGLNAK 434 (466)
T ss_dssp HHHHTTCBHH
T ss_pred HHHHCcCCHH
Confidence 7777776663
No 74
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.13 E-value=3.7e-05 Score=81.75 Aligned_cols=89 Identities=21% Similarity=0.117 Sum_probs=68.5
Q ss_pred hhhhHhhhHHHHHHHhhccccccccccccccccc---eeccccchhhhhhhhccceeeeehhchhcccceeccCCceeeE
Q 008662 110 SLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSK---LTNFSTDLKEASSKATVAAVDVLRNTIVALEESMTNGASFVVY 186 (558)
Q Consensus 110 ~~~~a~~~~r~~~d~~~~g~~~~~~~~~~~~~~~---~t~astgl~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 186 (558)
....|.+|||.+|+++.| ....+.+.......+ ...+++|++|+.+++.|++|++ ......++..|
T Consensus 335 ~~~~A~~qg~~aa~~i~g-~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~~~~~----------~~~~~~~~~~~ 403 (480)
T 3cgb_A 335 IGTTANKQGRLAGLNMLD-KRRAFKGTLGTGIIKFMNLTLARTGLNEKEAKGLHIPYKT----------VKVDSTNMAGY 403 (480)
T ss_dssp CHHHHHHHHHHHHHHHTT-CCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCEEE----------EEEEEESSCTT
T ss_pred hHHHHHHHHHHHHHHhcC-CCccCCCccceeEEEECCcEEEEeCCCHHHHHHcCCceEE----------EEEecCCcccc
Confidence 467899999999999995 555666665544444 6689999999999999999887 33333556677
Q ss_pred ccCCCccCCChhHHHhhhhhhhhcceee-ccccchhhHH
Q 008662 187 YYGTTKESLPPEIRDALNLYEDRAVKLW-RPVGSALQQQ 224 (558)
Q Consensus 187 ~pg~~~~~l~p~ik~~~~~~~~~~k~i~-~~~G~ilgaQ 224 (558)
+|+.....+ |+|+ +..|+++|+|
T Consensus 404 ~~~~~~~~~---------------kl~~~~~~~~ilG~~ 427 (480)
T 3cgb_A 404 YPNAKPLYL---------------KLLYRSDTKQLLGGQ 427 (480)
T ss_dssp STTCCEEEE---------------EEEEETTTCBEEEEE
T ss_pred cCCCceEEE---------------EEEEECCCCEEEEEE
Confidence 788766656 8888 5689999988
No 75
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.03 E-value=7.3e-05 Score=79.13 Aligned_cols=127 Identities=9% Similarity=-0.031 Sum_probs=79.9
Q ss_pred hhhhhhHHHhhHhhhhhhhhhHhhhHHHHHHHhhcccc---ccccccccccccc-eeccccchhhhhhhhccceeeeehh
Q 008662 93 MIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVF---SSIDQTGGSAGSK-LTNFSTDLKEASSKATVAAVDVLRN 168 (558)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~a~~~~r~~~d~~~~g~~---~~~~~~~~~~~~~-~t~astgl~e~~~~~~~~~~~~~~~ 168 (558)
|+-++++.. -...+..|.+|||.+|+|++|+.. ..+..+ -..+.- ...+++||+|+.+++.+..+++
T Consensus 326 IyA~GD~~~-----~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~-p~~~~~~p~~a~vGlte~~a~~~~~~~~~--- 396 (478)
T 3dk9_A 326 IYAVGDVCG-----KALLTPVAIAAGRKLAHRLFEYKEDSKLDYNNI-PTVVFSHPPIGTVGLTEDEAIHKYGIENV--- 396 (478)
T ss_dssp EEECGGGGC-----SSCCHHHHHHHHHHHHHHHHSCCTTCCCCCTTC-CEEECCSSCEEEEECCHHHHHHHHCGGGE---
T ss_pred EEEEEecCC-----CCccHhHHHHHHHHHHHHHcCCCCcccCCCCCC-CeEEECCCceEEeeCCHHHHHhhCCCccE---
Confidence 566666651 223466789999999999996411 223322 222222 5689999999999998754333
Q ss_pred chhcccceeccCCceeeEccCCCccCCChhHHHhhhhhhhhcceee-ccccchhhHHHHHHHHHHHHhcCCCCCCCcchh
Q 008662 169 TIVALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLW-RPVGSALQQQVSVAIEGLERSLGFDPNDPIVPF 247 (558)
Q Consensus 169 ~~~~~~~~~~~~~~~~~y~pg~~~~~l~p~ik~~~~~~~~~~k~i~-~~~G~ilgaQv~~g~~gvdkrigf~~~~PVla~ 247 (558)
..++.. ..+..++. ++|..+..+ |+|+ +.+|++||+| ++|- +...+|+ .+++
T Consensus 397 --~~~~~~-~~~~~~~~-~~~~~~g~~---------------k~i~~~~~~~ilG~~-~~g~-~a~e~i~------~~~~ 449 (478)
T 3dk9_A 397 --KTYSTS-FTPMYHAV-TKRKTKCVM---------------KMVCANKEEKVVGIH-MQGL-GCDEMLQ------GFAV 449 (478)
T ss_dssp --EEEEEE-ECCGGGGG-CSSCCCEEE---------------EEEEETTTTEEEEEE-EEST-THHHHHH------HHHH
T ss_pred --EEEEee-cCcchhhh-hcCCCcEEE---------------EEEEECCCCEEEEEE-EECC-CHHHHHH------HHHH
Confidence 001111 12233332 267777777 8998 6899999999 6664 5677777 6665
Q ss_pred hhhhhhHH
Q 008662 248 VVFLGTSA 255 (558)
Q Consensus 248 aI~~g~t~ 255 (558)
++..+.+.
T Consensus 450 ai~~~~t~ 457 (478)
T 3dk9_A 450 AVKMGATK 457 (478)
T ss_dssp HHHTTCBH
T ss_pred HHHCCCCH
Confidence 66655554
No 76
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=96.73 E-value=7.2e-05 Score=78.51 Aligned_cols=89 Identities=16% Similarity=0.099 Sum_probs=66.7
Q ss_pred hhhhHhhhHHHHHHHhhccccccccccccccccc---eeccccchhhhhhhhccceeeeehhchhcccceeccCCceeeE
Q 008662 110 SLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSK---LTNFSTDLKEASSKATVAAVDVLRNTIVALEESMTNGASFVVY 186 (558)
Q Consensus 110 ~~~~a~~~~r~~~d~~~~g~~~~~~~~~~~~~~~---~t~astgl~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 186 (558)
....|.+|||.+|+|+.| ....+.+.......+ ...+++|++|+.++..|+++.+ .......+..|
T Consensus 298 ~~~~A~~qg~~aa~~i~g-~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~~~~~----------~~~~~~~~~~~ 366 (447)
T 1nhp_A 298 LATNARKQGRFAVKNLEE-PVKPFPGVQGSSGLAVFDYKFASTGINEVMAQKLGKETKA----------VTVVEDYLMDF 366 (447)
T ss_dssp CHHHHHHHHHHHHHTSSS-CCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHHTCCCEE----------EEEEEESSCTT
T ss_pred hHHHHHHHHHHHHHhhcC-CCCCCCCccccEEEEECCeeeEEecCCHHHHHHcCCceEE----------EEEEcCCcccc
Confidence 577899999999999995 555566555544444 5679999999999999988766 22234456667
Q ss_pred ccCCCccCCChhHHHhhhhhhhhcceee-ccccchhhHH
Q 008662 187 YYGTTKESLPPEIRDALNLYEDRAVKLW-RPVGSALQQQ 224 (558)
Q Consensus 187 ~pg~~~~~l~p~ik~~~~~~~~~~k~i~-~~~G~ilgaQ 224 (558)
+|+.....+ |+|+ +..|+++|+|
T Consensus 367 ~~~~~~~~~---------------k~~~~~~~~~ilG~~ 390 (447)
T 1nhp_A 367 NPDKQKAWF---------------KLVYDPETTQILGAQ 390 (447)
T ss_dssp CTTCCEEEE---------------EEEECTTTCBEEEEE
T ss_pred CCCCceEEE---------------EEEEECCCCEEEEEE
Confidence 777766656 8888 5689999988
No 77
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=96.71 E-value=9.6e-05 Score=77.65 Aligned_cols=89 Identities=17% Similarity=0.024 Sum_probs=65.2
Q ss_pred hhhhHhhhHHHHHHHhhccccccccccccccccc---eeccccchhhhhhhhccceeeeehhchhcccceeccCCceeeE
Q 008662 110 SLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSK---LTNFSTDLKEASSKATVAAVDVLRNTIVALEESMTNGASFVVY 186 (558)
Q Consensus 110 ~~~~a~~~~r~~~d~~~~g~~~~~~~~~~~~~~~---~t~astgl~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 186 (558)
.+..|.+|||.+|+|++| ....+.+.......+ ...+++|++|+.++..|++|.+ .......+..+
T Consensus 299 ~~~~A~~~g~~aa~~i~g-~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~~~~~----------~~~~~~~~~~~ 367 (452)
T 2cdu_A 299 LATNAVRQGRLVGLNLTE-DKVKDMGTQSSSGLKLYGRTYVSTGINTALAKANNLKVSE----------VIIADNYRPEF 367 (452)
T ss_dssp CHHHHHHHHHHHHHTSSS-CCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCCEE----------EEEEEESSCTT
T ss_pred hHHHHHHHHHHHHHHhCC-CCCcCCCccceEEEEECCeeeEeecCCHHHHHHcCCceEE----------EEEecCCcccc
Confidence 567899999999999995 555555554433333 6789999999999999988776 22223445566
Q ss_pred ccCCCccCCChhHHHhhhhhhhhcceee-ccccchhhHH
Q 008662 187 YYGTTKESLPPEIRDALNLYEDRAVKLW-RPVGSALQQQ 224 (558)
Q Consensus 187 ~pg~~~~~l~p~ik~~~~~~~~~~k~i~-~~~G~ilgaQ 224 (558)
+|+.....+ |+|+ +..|+++|+|
T Consensus 368 ~~~~~~~~~---------------k~~~~~~~~~ilG~~ 391 (452)
T 2cdu_A 368 MLSTDEVLM---------------SLVYDPKTRVILGGA 391 (452)
T ss_dssp BSCCCEEEE---------------EEEECTTTCBEEEEE
T ss_pred CCCCceEEE---------------EEEEECCCCEEEEEE
Confidence 676655555 8888 5689999988
No 78
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=96.68 E-value=0.00022 Score=75.83 Aligned_cols=126 Identities=13% Similarity=0.007 Sum_probs=79.0
Q ss_pred hhhhhhhHHHhhHhhhhhhhhhHhhhHHHHHHHhhccccccccccccccccc--eeccccchhhhhhhhccceeeeehhc
Q 008662 92 SMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSK--LTNFSTDLKEASSKATVAAVDVLRNT 169 (558)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~a~~~~r~~~d~~~~g~~~~~~~~~~~~~~~--~t~astgl~e~~~~~~~~~~~~~~~~ 169 (558)
.|+-++++... ......|.+|||.+|+|++| ....++...-..+.- ...+++|++|+.+++.|++|.+.+
T Consensus 318 ~IyA~GD~~~~-----~~l~~~A~~~g~~aa~~i~g-~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~g~~~~~~~-- 389 (482)
T 1ojt_A 318 HIYAIGDIVGQ-----PMLAHKAVHEGHVAAENCAG-HKAYFDARVIPGVAYTSPEVAWVGETELSAKASARKITKAN-- 389 (482)
T ss_dssp TEEECGGGTCS-----SCCHHHHHHHHHHHHHHHTT-CCCCCCCCCCCEEECSSSCEEEEECCHHHHHHHTCCEEEEE--
T ss_pred CEEEEEcccCC-----CccHHHHHHHHHHHHHHHcC-CCccCCCCCCCEEEEcCCCeEEEeCCHHHHHhcCCCEEEEE--
Confidence 35555665431 23456799999999999995 555565543332222 568999999999999999877721
Q ss_pred hhcccceeccCCceeeEccCCCccCCChhHHHhhhhhhhhcceee-ccccchhhHHHHHHHHHHHHhcCCCCCCCcchhh
Q 008662 170 IVALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLW-RPVGSALQQQVSVAIEGLERSLGFDPNDPIVPFV 248 (558)
Q Consensus 170 ~~~~~~~~~~~~~~~~y~pg~~~~~l~p~ik~~~~~~~~~~k~i~-~~~G~ilgaQv~~g~~gvdkrigf~~~~PVla~a 248 (558)
.......++.++ |.....+ |+|+ +..|+++|+| ++|-. ....++ .++.+
T Consensus 390 ------~~~~~~~~~~~~-~~~~~~~---------------k~~~~~~~~~ilG~~-~~g~~-a~e~i~------~~~~a 439 (482)
T 1ojt_A 390 ------FPWAASGRAIAN-GCDKPFT---------------KLIFDAETGRIIGGG-IVGPN-GGDMIG------EVCLA 439 (482)
T ss_dssp ------EEGGGCHHHHHT-TCCSCEE---------------EEEEETTTCBEEEEE-EESTT-HHHHHH------HHHHH
T ss_pred ------EEcCcchHHhhc-CCCcEEE---------------EEEEECCCCEEEEEE-EECCC-HHHHHH------HHHHH
Confidence 111233344444 5555555 8888 5789999998 55543 233455 44444
Q ss_pred hhhhhHH
Q 008662 249 VFLGTSA 255 (558)
Q Consensus 249 I~~g~t~ 255 (558)
+..+.+.
T Consensus 440 i~~~~~~ 446 (482)
T 1ojt_A 440 IEMGCDA 446 (482)
T ss_dssp HHTTCBH
T ss_pred HHCCCCH
Confidence 5544444
No 79
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=96.66 E-value=0.00016 Score=77.87 Aligned_cols=115 Identities=9% Similarity=-0.058 Sum_probs=68.9
Q ss_pred hhhhhhHHHhhHhhhhhhhhhHhhhHHHHHHHhhcccccccc-ccccccccc-eeccccchhhhhhhhccceeeeehhch
Q 008662 93 MIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSID-QTGGSAGSK-LTNFSTDLKEASSKATVAAVDVLRNTI 170 (558)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~a~~~~r~~~d~~~~g~~~~~~-~~~~~~~~~-~t~astgl~e~~~~~~~~~~~~~~~~~ 170 (558)
|+-++++... ...+..|.+|||.+|+|++| ....++ +.+...+.- ...+++|++|+.+++.|++|.+.+.-+
T Consensus 348 IyA~GD~~~~-----~~~~~~A~~~g~~aa~~i~g-~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~ 421 (523)
T 1mo9_A 348 VYAVGDLIGG-----PMEMFKARKSGCYAARNVMG-EKISYTPKNYPDFLHTHYEVSFLGMGEEEARAAGHEIVTIKMPP 421 (523)
T ss_dssp EEECGGGGCS-----SCSHHHHHHHHHHHHHHHTT-CCCCCCCCSCCEEEESSSEEEEEECCHHHHHHTTCCEEEEEESC
T ss_pred EEEEeecCCC-----cccHHHHHHHHHHHHHHHcC-CCCCCCCCCCCeEEECCCceEEEeCCHHHHHhCCCCEEEEEEec
Confidence 4555555421 13456799999999999995 555543 333333322 668999999999999999877721000
Q ss_pred hc-ccceeccC-----CceeeEc-cCCCccCCChhHHHhhhhhhhhcceee-ccccchhhHHHHHHH
Q 008662 171 VA-LEESMTNG-----ASFVVYY-YGTTKESLPPEIRDALNLYEDRAVKLW-RPVGSALQQQVSVAI 229 (558)
Q Consensus 171 ~~-~~~~~~~~-----~~~~~y~-pg~~~~~l~p~ik~~~~~~~~~~k~i~-~~~G~ilgaQv~~g~ 229 (558)
.. -+..+..| ..++.|+ ||.....+ |+|+ +.+|++||+| ++|-
T Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------k~~~~~~~~~ilG~~-~~g~ 472 (523)
T 1mo9_A 422 DTENGLNVALPASDRTMLYAFGKGTAHMSGFQ---------------KIVIDAKTRKVLGAH-HVGY 472 (523)
T ss_dssp CSTTTTCSSCSCCTTTHHHHHSTTTGGGGCEE---------------EEEEETTTCBEEEEE-EEES
T ss_pred ccccccccccccccccccceEEeecCCCCEEE---------------EEEEECCCCEEEEEE-EECC
Confidence 00 00000000 2244555 35555555 8888 5789999998 4443
No 80
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=96.58 E-value=0.00023 Score=76.12 Aligned_cols=128 Identities=13% Similarity=-0.013 Sum_probs=82.8
Q ss_pred hhhhhhhHHHhhHhhhhhhhhhHhhhHHHHHHHhhccc-ccccc-cccccccc-ceeccccchhhhhhhhc-----ccee
Q 008662 92 SMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRV-FSSID-QTGGSAGS-KLTNFSTDLKEASSKAT-----VAAV 163 (558)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~a~~~~r~~~d~~~~g~-~~~~~-~~~~~~~~-~~t~astgl~e~~~~~~-----~~~~ 163 (558)
.|+-++++..- ......|.+|||.+|+|+++.. ....+ .+.-..+. ....+++|++|+.+++. |++|
T Consensus 307 ~IyA~GD~~~~-----~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~g~~~g~~~ 381 (492)
T 3ic9_A 307 HIFVAGDANNT-----LTLLHEAADDGKVAGTNAGAYPVIAQGQRRAPLSVVFTEPQVASVGLSLRQIEDLYADQDAANY 381 (492)
T ss_dssp TEEECGGGGTS-----SCSHHHHHHHHHHHHHHHHHTTSCCEECCCCCEEEECSSSEEEEEESCHHHHHHHCSCSSSCCE
T ss_pred CEEEEEecCCC-----CccHHHHHHHHHHHHHHHcCCCCCcccCCCCCcEEEECCCCeEEecCCHHHHHhccCccCCccE
Confidence 35566666431 2346689999999999999511 11111 12222222 26689999999999988 3777
Q ss_pred eeehhchhcccceeccCCceeeEccCCCccCCChhHHHhhhhhhhhcceee-ccccchhhHHHHHHHHHHHHhcCCCCCC
Q 008662 164 DVLRNTIVALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLW-RPVGSALQQQVSVAIEGLERSLGFDPND 242 (558)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~y~pg~~~~~l~p~ik~~~~~~~~~~k~i~-~~~G~ilgaQv~~g~~gvdkrigf~~~~ 242 (558)
++.+ .......++.|+ |.....+ |+|+ +.+|++||+| ++|-+ ....|+
T Consensus 382 ~~~~--------~~~~~~~~a~~~-~~~~g~~---------------kli~~~~~~~ilG~~-~~g~~-a~e~i~----- 430 (492)
T 3ic9_A 382 VVGQ--------VSFEGQGRSRVM-GKNKGLL---------------NVYADRTSGEFLGAE-MFGPA-AEHIGH----- 430 (492)
T ss_dssp EEEE--------EEGGGCHHHHHT-TCCCCEE---------------EEEEETTTCBEEEEE-EEETT-HHHHHH-----
T ss_pred EEEE--------EEeccchhhhhc-CCCcEEE---------------EEEEECCCCEEEEEE-EECCC-HHHHHH-----
Confidence 6622 233345556555 7777777 8899 6899999999 66654 456666
Q ss_pred CcchhhhhhhhHHH
Q 008662 243 PIVPFVVFLGTSAT 256 (558)
Q Consensus 243 PVla~aI~~g~t~~ 256 (558)
.+++++..+.+..
T Consensus 431 -~~~~ai~~~~t~~ 443 (492)
T 3ic9_A 431 -LLAWARQQQMTVQ 443 (492)
T ss_dssp -HHHHHHHTTCBHH
T ss_pred -HHHHHHHCCCCHH
Confidence 6666666666653
No 81
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.55 E-value=0.00031 Score=75.13 Aligned_cols=114 Identities=9% Similarity=-0.046 Sum_probs=74.2
Q ss_pred hhhhHhhhHHHHHHHhhccccc--cccccccccccc-eeccccchhhhhhhhc-c-ceeeeehhchhcccceeccCCcee
Q 008662 110 SLTSIKKSTSEAVDNVVSRVFS--SIDQTGGSAGSK-LTNFSTDLKEASSKAT-V-AAVDVLRNTIVALEESMTNGASFV 184 (558)
Q Consensus 110 ~~~~a~~~~r~~~d~~~~g~~~--~~~~~~~~~~~~-~t~astgl~e~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~ 184 (558)
....|++|||.+|+|++|+... .|++ +.+.+.- ...+++|++|+.+++. | ..+.+ +... ..+..++
T Consensus 353 ~~~~A~~~g~~aa~~i~g~~~~~~~~~~-~p~~~~~~~~~a~vGl~e~~a~~~~g~~~~~~-------~~~~-~~~~~~~ 423 (500)
T 1onf_A 353 LTPVAINAGRLLADRLFLKKTRKTNYKL-IPTVIFSHPPIGTIGLSEEAAIQIYGKENVKI-------YESK-FTNLFFS 423 (500)
T ss_dssp CHHHHHHHHHHHHHHHHSCTTCCCCCSS-CCEEECCSSCEEEEECCHHHHHHHTCGGGEEE-------EEEE-ECCGGGT
T ss_pred chhHHHHHHHHHHHHHhCCCCccCCCCC-CCeEEEcCcceEEEeCCHHHHHhcCCCccEEE-------EEEE-Cchhhhh
Confidence 5678999999999999964322 2333 2222222 6689999999998887 4 55555 2222 2344555
Q ss_pred eE---ccCCCccCCChhHHHhhhhhhhhcceee-ccccchhhHHHHHHHHHHHHhcCCCCCCCcchhhhhhhhHH
Q 008662 185 VY---YYGTTKESLPPEIRDALNLYEDRAVKLW-RPVGSALQQQVSVAIEGLERSLGFDPNDPIVPFVVFLGTSA 255 (558)
Q Consensus 185 ~y---~pg~~~~~l~p~ik~~~~~~~~~~k~i~-~~~G~ilgaQv~~g~~gvdkrigf~~~~PVla~aI~~g~t~ 255 (558)
.| ..+.....+ |+|+ +.+|++||+| ++|-+ ...+++ .+++++..+.+.
T Consensus 424 ~~~~~~~~~~~~~~---------------kli~~~~~~~ilG~~-~~g~~-a~~~i~------~~~~ai~~~~t~ 475 (500)
T 1onf_A 424 VYDIEPELKEKTYL---------------KLVCVGKDELIKGLH-IIGLN-ADEIVQ------GFAVALKMNATK 475 (500)
T ss_dssp TSCSCGGGSCCEEE---------------EEEEETTTTEEEEEE-EESTT-HHHHHH------HHHHHHHTTCBH
T ss_pred hccccccCCCceEE---------------EEEEECCCCEEEEEE-EECCC-HHHHHH------HHHHHHHcCCCH
Confidence 55 345666666 8898 6789999999 66643 666676 656555555554
No 82
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=96.40 E-value=0.0035 Score=57.13 Aligned_cols=105 Identities=12% Similarity=0.082 Sum_probs=58.7
Q ss_pred CCcCHHHHHHHHhCCCCcEEEEcCChhh------------HhhC-CCCCccccccccccccCcccccchhHhhhcCchhh
Q 008662 271 GDLSPKSTLELLRGKENAVLIDVRHEDL------------RERD-GIPDLRRGARFRYASVYLPEVGGSVKKLLRGGREL 337 (558)
Q Consensus 271 g~ISp~Ea~elL~~~~~avLIDVRs~~E------------f~~G-HIPGA~gai~~d~~nIPL~eL~~~l~ell~~~~~L 337 (558)
+.++++++..+.+. .-..+||+|++.| |.+. +|+|.+ ++|+.... ...+.+
T Consensus 28 ~~~~~~d~~~L~~~-Gi~~IIdlR~~~E~~~~p~~~~~~~~~~~~gi~~~~--------~iPv~~~~-------~~~~~~ 91 (156)
T 2f46_A 28 PQLTKADAEQIAQL-GIKTIICNRPDREEESQPDFAQIKQWLEQAGVTGFH--------HQPVTARD-------IQKHDV 91 (156)
T ss_dssp SCCCGGGHHHHHHH-TCCEEEECSCTTSSTTCCCHHHHHHHHGGGTCCEEE--------ECCCCTTT-------CCHHHH
T ss_pred CCCCHHHHHHHHHC-CCCEEEECCCCccccCCCcHHHHHHHHHHCCCHhhe--------ECccCCCC-------CCHHHH
Confidence 45788888776542 3358999998766 2222 466555 78874321 001122
Q ss_pred hhHHHHHHHhhhcccCCCceEEEEeCCCchHHHHHHH-HHHccCCCEEEecchHHHHHHcCCCeec
Q 008662 338 DDTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARS-LRKLGVMRAFLVQGGFQSWVKEGLRIKE 402 (558)
Q Consensus 338 ~~ll~aaGI~~Lk~~~kdk~IVVyC~sG~RS~~AA~~-L~~~Gf~nVy~LdGG~~aWkaAGLPV~~ 402 (558)
.+.+.. +. ..+.+|+|||++|.|+..++.. |...|.. .+.=+...++.|+.+..
T Consensus 92 ~~~~~~--l~-----~~~~pVlvHC~sG~Rs~~l~al~l~~~g~~----~~~a~~~~~~~g~~l~~ 146 (156)
T 2f46_A 92 ETFRQL--IG-----QAEYPVLAYCRTGTRCSLLWGFRRAAEGMP----VDEIIRRAQAAGVNLEN 146 (156)
T ss_dssp HHHHHH--HH-----TSCSSEEEECSSSHHHHHHHHHHHHHTTCC----HHHHHHHHHHTTCCCGG
T ss_pred HHHHHH--HH-----hCCCCEEEECCCCCCHHHHHHHHHHHcCCC----HHHHHHHHHHcCCCcHH
Confidence 221111 11 3478999999999988754443 2445543 22334455666765443
No 83
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=96.39 E-value=0.00022 Score=76.03 Aligned_cols=89 Identities=16% Similarity=0.048 Sum_probs=63.6
Q ss_pred hhhhHhhhHHHHHHHhhccccccccccccccc---cceeccccchhhhhhhhccceeeeehhchhcccceeccCCceeeE
Q 008662 110 SLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAG---SKLTNFSTDLKEASSKATVAAVDVLRNTIVALEESMTNGASFVVY 186 (558)
Q Consensus 110 ~~~~a~~~~r~~~d~~~~g~~~~~~~~~~~~~---~~~t~astgl~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 186 (558)
.+..|.+|||.+|+|++| ....+.+...... .....+++|++|+.++..|++|.+ .......+..|
T Consensus 343 ~~~~A~~qg~~aa~~i~g-~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~~~~~----------~~~~~~~~~~~ 411 (490)
T 2bc0_A 343 LASNAVRTGIVAAHNACG-TDLEGIGVQGSNGISIYGLHMVSTGLTLEKAKRLGFDAAV----------TEYTDNQKPEF 411 (490)
T ss_dssp CHHHHHHHHHHHHHHHTT-CCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCEEE----------EEEEEESSCTT
T ss_pred cHHHHHHHHHHHHHHhcC-CCCCCCCcccceEEEECCcEeEEeeCCHHHHHHcCCceEE----------EEEecCCcccc
Confidence 567899999999999995 5545555443322 236789999999999999988776 22223344556
Q ss_pred cc-CCCccCCChhHHHhhhhhhhhcceee-ccccchhhHH
Q 008662 187 YY-GTTKESLPPEIRDALNLYEDRAVKLW-RPVGSALQQQ 224 (558)
Q Consensus 187 ~p-g~~~~~l~p~ik~~~~~~~~~~k~i~-~~~G~ilgaQ 224 (558)
++ +.....+ |+|+ +.+|+++|+|
T Consensus 412 ~~~~~~~~~~---------------kl~~~~~~~~ilG~~ 436 (490)
T 2bc0_A 412 IEHGNFPVTI---------------KIVYDKDSRRILGAQ 436 (490)
T ss_dssp CCSSCCEEEE---------------EEEEETTTCBEEEEE
T ss_pred cCCCCceEEE---------------EEEEECCCCEEEEEE
Confidence 66 5555555 8888 5689999988
No 84
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=96.39 E-value=0.00034 Score=75.44 Aligned_cols=108 Identities=6% Similarity=-0.068 Sum_probs=64.7
Q ss_pred hhhhhhHHHhhHhhhhhhhhhHhhhHHHHHHHhhccccccccccccccccc---eeccccchhhhhhhhcc--ceeeeeh
Q 008662 93 MIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSK---LTNFSTDLKEASSKATV--AAVDVLR 167 (558)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~a~~~~r~~~d~~~~g~~~~~~~~~~~~~~~---~t~astgl~e~~~~~~~--~~~~~~~ 167 (558)
|+-++++... -...+..|.+|||.+|+|++| ....+....+..... ...+++||+|+.+++.+ ..+++.+
T Consensus 349 IyA~GD~~~g----~~~~~~~A~~~g~~aa~~i~g-~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~~~~~~~~~~ 423 (519)
T 3qfa_A 349 IYAIGDILED----KVELTPVAIQAGRLLAQRLYA-GSTVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYH 423 (519)
T ss_dssp EEECGGGBSS----SCCCHHHHHHHHHHHHHHHHS-CCCCCCCCTTCCEEECSSSCEEEEECCHHHHHHHHCGGGEEEEE
T ss_pred EEEEEeccCC----CCccHHHHHHHHHHHHHHHcC-CCCccCCCCcCcEEEECCCceEEecCCHHHHHhhCCCCCEEEEE
Confidence 5566666521 123456789999999999995 433333333333333 66899999999998863 2343311
Q ss_pred hchhcccceeccCCceeeEccCCCccCCChhHHHhhhhhhhhcceeec--cccchhhHHHHHHH
Q 008662 168 NTIVALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLWR--PVGSALQQQVSVAI 229 (558)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~y~pg~~~~~l~p~ik~~~~~~~~~~k~i~~--~~G~ilgaQv~~g~ 229 (558)
....+.+++.++.+.....+ |+|+. .+|++||+| ++|-
T Consensus 424 --------~~~~~~~~~~~~~~~~~g~~---------------Kli~~~~~~~~ilGa~-i~g~ 463 (519)
T 3qfa_A 424 --------SYFWPLEWTIPSRDNNKCYA---------------KIICNTKDNERVVGFH-VLGP 463 (519)
T ss_dssp --------EEECCHHHHTTTCCTTTEEE---------------EEEEETTTTCEEEEEE-EEST
T ss_pred --------EeccchhhhhhccCCCcEEE---------------EEEEecCCCCEEEEEE-EECC
Confidence 11122233333334444555 88984 479999999 5554
No 85
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.85 E-value=0.0011 Score=69.58 Aligned_cols=107 Identities=12% Similarity=-0.011 Sum_probs=67.6
Q ss_pred hhhhhhhHHHhhHhhhhhhhhhHhhhHHHHHHHhhcccccccccccccccc--ceeccccchhhhhhhhccceeeeehhc
Q 008662 92 SMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGS--KLTNFSTDLKEASSKATVAAVDVLRNT 169 (558)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~a~~~~r~~~d~~~~g~~~~~~~~~~~~~~--~~t~astgl~e~~~~~~~~~~~~~~~~ 169 (558)
.|+-++++..- ......|.+|||.+|+|+.| ....++...-..+. ....+++|++|+.+++.|++|.+.+
T Consensus 302 ~Iya~GD~~~~-----~~~~~~A~~~g~~aa~~i~~-~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~-- 373 (455)
T 1ebd_A 302 NIFAIGDIVPG-----PALAHKASYEGKVAAEAIAG-HPSAVDYVAIPAVVFSDPECASVGYFEQQAKDEGIDVIAAK-- 373 (455)
T ss_dssp TEEECGGGSSS-----CCCHHHHHHHHHHHHHHHTS-CCCCCCCSCCCEEECSSSCEEEEECCHHHHHTTTCCEEEEE--
T ss_pred CEEEEeccCCC-----cccHHHHHHHHHHHHHHHcC-CCccCCCCCCCEEEECCCceEEEeCCHHHHHhcCCCEEEEE--
Confidence 35555555421 22456799999999999995 55555433222221 1567899999999999999877722
Q ss_pred hhcccceeccCCceeeEccCCCccCCChhHHHhhhhhhhhcceee-ccccchhhHHHHHHH
Q 008662 170 IVALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLW-RPVGSALQQQVSVAI 229 (558)
Q Consensus 170 ~~~~~~~~~~~~~~~~y~pg~~~~~l~p~ik~~~~~~~~~~k~i~-~~~G~ilgaQv~~g~ 229 (558)
.......++.++ |.....+ |+|+ +..|+++|+| ++|-
T Consensus 374 ------~~~~~~~~~~~~-~~~~~~~---------------k~~~~~~~~~ilG~~-~~g~ 411 (455)
T 1ebd_A 374 ------FPFAANGRALAL-NDTDGFL---------------KLVVRKEDGVIIGAQ-IIGP 411 (455)
T ss_dssp ------EEGGGCHHHHHH-TCCCCEE---------------EEEEETTTTEEEEEE-EEST
T ss_pred ------EEcCcchHHhhc-CCCcEEE---------------EEEEECCCCEEEEEE-EeCC
Confidence 111122333333 5555555 8888 5789999998 5554
No 86
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=95.81 E-value=0.0012 Score=69.55 Aligned_cols=108 Identities=12% Similarity=-0.076 Sum_probs=67.8
Q ss_pred hhhhhhhHHHhhHhhhhhhhhhHhhhHHHHHHHhhcccccccccccccccc--ceeccccchhhhhhhhccceeeeehhc
Q 008662 92 SMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGS--KLTNFSTDLKEASSKATVAAVDVLRNT 169 (558)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~a~~~~r~~~d~~~~g~~~~~~~~~~~~~~--~~t~astgl~e~~~~~~~~~~~~~~~~ 169 (558)
.|+-++++... .......|.+|||.+|++++| ....++...-..+. ....+++|++|+.+++.|++|.+.+
T Consensus 308 ~IyA~GD~~~~----~~~~~~~A~~~g~~aa~~i~~-~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~-- 380 (468)
T 2qae_A 308 DVYAIGDVVDK----GPMLAHKAEDEGVACAEILAG-KPGHVNYGVIPAVIYTMPEVASVGKSEDELKKEGVAYKVGK-- 380 (468)
T ss_dssp TEEECGGGBSS----SCSCHHHHHHHHHHHHHHHTT-CCCCCCTTSCCEEECSSSEEEEEECCHHHHHHTTCCEEEEE--
T ss_pred CEEEeeccCCC----CCccHhHHHHHHHHHHHHHcC-CCccCCCCCCCEEEECCCceEEEeCCHHHHHhcCCCEEEEE--
Confidence 35555665431 123456799999999999995 55555443222221 1568999999999999999877722
Q ss_pred hhcccceeccCCceeeEccCCCccCCChhHHHhhhhhhhhcceee-ccccchhhHHHHHHH
Q 008662 170 IVALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLW-RPVGSALQQQVSVAI 229 (558)
Q Consensus 170 ~~~~~~~~~~~~~~~~y~pg~~~~~l~p~ik~~~~~~~~~~k~i~-~~~G~ilgaQv~~g~ 229 (558)
.......++.+ .|.....+ |+|+ +..|+++|+| ++|-
T Consensus 381 ------~~~~~~~~~~~-~~~~~~~~---------------kl~~~~~~~~ilG~~-~~g~ 418 (468)
T 2qae_A 381 ------FPFNANSRAKA-VSTEDGFV---------------KVLVDKATDRILGVH-IVCT 418 (468)
T ss_dssp ------EEGGGCHHHHH-TTCCCCEE---------------EEEEETTTCBEEEEE-EEET
T ss_pred ------Eecccchhhhh-cCCCcEEE---------------EEEEECCCCEEEEEE-EECC
Confidence 11112233333 35555555 8888 5689999998 4443
No 87
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=95.76 E-value=0.00085 Score=71.34 Aligned_cols=119 Identities=11% Similarity=-0.025 Sum_probs=72.7
Q ss_pred hhhhhhHHHhhHhhhhhhhhhHhhhHHHHHHHhhccccccccc--cccccccc-eeccccchhhhhhhhc-c-ceeeeeh
Q 008662 93 MIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQ--TGGSAGSK-LTNFSTDLKEASSKAT-V-AAVDVLR 167 (558)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~a~~~~r~~~d~~~~g~~~~~~~--~~~~~~~~-~t~astgl~e~~~~~~-~-~~~~~~~ 167 (558)
|+-++++... -...+..|.+|||.+|+|++| ....... .+...+.. ...+++||+|+.+++. | ..+++
T Consensus 321 IyA~GD~~~~----~~~~~~~A~~~g~~aa~~i~g-~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~~~~~~~~-- 393 (488)
T 3dgz_A 321 IYAIGDVAEG----RPELTPTAIKAGKLLAQRLFG-KSSTLMDYSNVPTTVFTPLEYGCVGLSEEEAVALHGQEHVEV-- 393 (488)
T ss_dssp EEECGGGBTT----CCCCHHHHHHHHHHHHHHHHS-CCCCCCCCTTCCEEECSSSEEEEEECCHHHHHHHHCGGGEEE--
T ss_pred EEEeEEecCC----CCcchhHHHHHHHHHHHHHcC-CCCccCCCCCCCEEEECCCCeEEEeCCHHHHHhhCCCCcEEE--
Confidence 5556666521 123456799999999999995 4332222 23333333 6689999999998875 3 33444
Q ss_pred hchhcccceeccCCceeeEccC--------CCccCCChhHHHhhhhhhhhcceeec--cccchhhHHHHHHHHHHHHhcC
Q 008662 168 NTIVALEESMTNGASFVVYYYG--------TTKESLPPEIRDALNLYEDRAVKLWR--PVGSALQQQVSVAIEGLERSLG 237 (558)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~y~pg--------~~~~~l~p~ik~~~~~~~~~~k~i~~--~~G~ilgaQv~~g~~gvdkrig 237 (558)
. +..|+|. ..+..+ |+|+. .+|++||+| ++|-+ ...+|+
T Consensus 394 --------~------~~~~~~~~~~~~~~~~~~g~~---------------k~i~~~~~~~~ilG~~-~~g~~-a~e~i~ 442 (488)
T 3dgz_A 394 --------Y------HAYYKPLEFTVADRDASQCYI---------------KMVCMREPPQLVLGLH-FLGPN-AGEVTQ 442 (488)
T ss_dssp --------E------EEECCCHHHHHTTCCCTTCEE---------------EEEEESSTTCBEEEEE-EEETT-HHHHHH
T ss_pred --------E------EccccchhhhhhccCCCcEEE---------------EEEEecCCCCEEEEEE-EECCC-HHHHHH
Confidence 1 2233332 133444 88885 699999999 66654 345666
Q ss_pred CCCCCCcchhhhhhhhHH
Q 008662 238 FDPNDPIVPFVVFLGTSA 255 (558)
Q Consensus 238 f~~~~PVla~aI~~g~t~ 255 (558)
.++++|..+++.
T Consensus 443 ------~~~~ai~~~~t~ 454 (488)
T 3dgz_A 443 ------GFALGIKCGASY 454 (488)
T ss_dssp ------HHHHHHHTTCBH
T ss_pred ------HHHHHHHCCCCH
Confidence 556566655554
No 88
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.67 E-value=0.0014 Score=68.91 Aligned_cols=107 Identities=9% Similarity=-0.050 Sum_probs=66.8
Q ss_pred hhhhhhhHHHhhHhhhhhhhhhHhhhHHHHHHHhhccccccccccccccccc--eeccccchhhhhhhhccceeeeehhc
Q 008662 92 SMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSK--LTNFSTDLKEASSKATVAAVDVLRNT 169 (558)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~a~~~~r~~~d~~~~g~~~~~~~~~~~~~~~--~t~astgl~e~~~~~~~~~~~~~~~~ 169 (558)
.|+-++++..- ...+..|.+|||.+|+++.| ....++...-..+.- ...+++|++|+.+++.|++|.+.+
T Consensus 311 ~Iya~GD~~~~-----~~~~~~A~~~g~~aa~~i~g-~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~-- 382 (470)
T 1dxl_A 311 GVYAIGDVIPG-----PMLAHKAEEDGVACVEYLAG-KVGHVDYDKVPGVVYTNPEVASVGKTEEQVKETGVEYRVGK-- 382 (470)
T ss_dssp TEEECSTTSSS-----CCCHHHHHHHHHHHHHHHTT-SCCCCCTTSCCEEECSSSEEEEEECCHHHHHHTTCCEEEEE--
T ss_pred CEEEEeccCCC-----CccHHHHHHHHHHHHHHHcC-CCcCCCCCCCCEEEECCCceEEEcCCHHHHHhcCCcEEEEE--
Confidence 34555555421 23456799999999999995 555554432222211 568999999999999999877722
Q ss_pred hhcccceeccCCceeeEccCCCccCCChhHHHhhhhhhhhcceee-ccccchhhHHHHHHH
Q 008662 170 IVALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLW-RPVGSALQQQVSVAI 229 (558)
Q Consensus 170 ~~~~~~~~~~~~~~~~y~pg~~~~~l~p~ik~~~~~~~~~~k~i~-~~~G~ilgaQv~~g~ 229 (558)
.......++.++ |.....+ |+|+ +..|+++|+| ++|-
T Consensus 383 ------~~~~~~~~~~~~-~~~~~~~---------------k~~~~~~~~~ilG~~-~~g~ 420 (470)
T 1dxl_A 383 ------FPFMANSRAKAI-DNAEGLV---------------KIIAEKETDKILGVH-IMAP 420 (470)
T ss_dssp ------EEGGGCHHHHHH-SCCCCEE---------------EEEEETTTCBEEEEE-EEET
T ss_pred ------EecccchHHHhc-CCCcEEE---------------EEEEECCCCEEEEEE-EECC
Confidence 111122233232 4444445 8888 5689999988 4443
No 89
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=95.64 E-value=0.0015 Score=69.03 Aligned_cols=125 Identities=12% Similarity=-0.005 Sum_probs=75.2
Q ss_pred hhhhhhHHHhhHhhhhhhhhhHhhhHHHHHHHhhcccccccccccccccc-ceeccccchhhhhhhhccceeeeehhchh
Q 008662 93 MIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGS-KLTNFSTDLKEASSKATVAAVDVLRNTIV 171 (558)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~a~~~~r~~~d~~~~g~~~~~~~~~~~~~~-~~t~astgl~e~~~~~~~~~~~~~~~~~~ 171 (558)
|+-++++... ......|.+|||.+|+|++| ....++..+...+. ....+++|++|+.+++.|++|.+.+
T Consensus 304 Iya~GD~~~~-----~~l~~~A~~~g~~aa~~i~g-~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~---- 373 (464)
T 2eq6_A 304 VYAIGDAARP-----PLLAHKAMREGLIAAENAAG-KDSAFDYQVPSVVYTSPEWAGVGLTEEEAKRAGYKVKVGK---- 373 (464)
T ss_dssp EEECGGGTCS-----SCCHHHHHHHHHHHHHHHTT-CCCCCCCCCCEEECSSSEEEEEECCHHHHHHTTCCEEEEE----
T ss_pred EEEEeccCCC-----cccHHHHHHHHHHHHHHhcC-CCcccCCCCCeEEECCCCEEEEeCCHHHHHhcCCCEEEEE----
Confidence 5555555421 22456799999999999995 55544444222221 2568999999999999999877621
Q ss_pred cccceeccCCceeeEccCCCccCCChhHHHhhhhhhhhcceee-ccccchhhHHHHHHHHHHHHhcCCCCCCCcchhhhh
Q 008662 172 ALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLW-RPVGSALQQQVSVAIEGLERSLGFDPNDPIVPFVVF 250 (558)
Q Consensus 172 ~~~~~~~~~~~~~~y~pg~~~~~l~p~ik~~~~~~~~~~k~i~-~~~G~ilgaQv~~g~~gvdkrigf~~~~PVla~aI~ 250 (558)
.......++.++ |.....+ |+|+ +..|+++|+| ++|-. ....++ .++.++.
T Consensus 374 ----~~~~~~~~~~~~-~~~~g~~---------------k~~~~~~~~~ilG~~-~~g~~-a~e~i~------~~~~ai~ 425 (464)
T 2eq6_A 374 ----FPLAASGRALTL-GGAEGMV---------------KVVGDEETDLLLGVF-IVGPQ-AGELIA------EAALALE 425 (464)
T ss_dssp ----EEGGGCHHHHHT-SCCCCEE---------------EEEEETTTCBEEEEE-EEETT-HHHHHH------HHHHHHH
T ss_pred ----EEcCcchhhhhc-CCCcEEE---------------EEEEECCCCEEEEEE-EECCC-HHHHHH------HHHHHHH
Confidence 111223333333 5555545 8888 4689999998 44443 233344 4444444
Q ss_pred hhhHH
Q 008662 251 LGTSA 255 (558)
Q Consensus 251 ~g~t~ 255 (558)
.+.+.
T Consensus 426 ~~~~~ 430 (464)
T 2eq6_A 426 MGATL 430 (464)
T ss_dssp TTCBH
T ss_pred CCCCH
Confidence 44443
No 90
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=95.60 E-value=0.002 Score=68.35 Aligned_cols=119 Identities=7% Similarity=-0.074 Sum_probs=69.6
Q ss_pred hhhhhhHHHhhHhhhhhhhhhHhhhHHHHHHHhhccccc--cccccccccccc-eeccccchhhhhhhhc-c-ceeeeeh
Q 008662 93 MIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFS--SIDQTGGSAGSK-LTNFSTDLKEASSKAT-V-AAVDVLR 167 (558)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~a~~~~r~~~d~~~~g~~~--~~~~~~~~~~~~-~t~astgl~e~~~~~~-~-~~~~~~~ 167 (558)
|+-++++... -...+..|.+|||.+|+|++|+... .+.. +...+.. ...+++||+|+.+++. | ..+++.
T Consensus 321 IyA~GD~~~~----~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~-~p~~~~~~p~~a~vGlte~~a~~~~~~~~~~~~- 394 (483)
T 3dgh_A 321 IYAVGDIIYG----KPELTPVAVLAGRLLARRLYGGSTQRMDYKD-VATTVFTPLEYACVGLSEEDAVKQFGADEIEVF- 394 (483)
T ss_dssp EEECSTTBTT----SCCCHHHHHHHHHHHHHHHHSCCCCCCCCTT-CCEEECSSSEEEEEECCHHHHHHHHCGGGEEEE-
T ss_pred EEEEEcccCC----CCccHHHHHHHHHHHHHHHcCCCCCcCCCCC-CCEEEECCCccEEEeCCHHHHHhhCCCCCEEEE-
Confidence 5556666521 1234567999999999999954322 2333 2333333 6689999999999875 3 234441
Q ss_pred hchhcccceeccCCceeeEccC--------CCccCCChhHHHhhhhhhhhcceee-cc-ccchhhHHHHHHHHHHHHhcC
Q 008662 168 NTIVALEESMTNGASFVVYYYG--------TTKESLPPEIRDALNLYEDRAVKLW-RP-VGSALQQQVSVAIEGLERSLG 237 (558)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~y~pg--------~~~~~l~p~ik~~~~~~~~~~k~i~-~~-~G~ilgaQv~~g~~gvdkrig 237 (558)
+..|+|. ..+..+ |+|+ +. +|++||+| ++|-+ ...+|+
T Consensus 395 ---------------~~~~~~~~~~~~~~~~~~~~~---------------k~i~~~~~~~~ilG~~-~~g~~-a~e~i~ 442 (483)
T 3dgh_A 395 ---------------HGYYKPTEFFIPQKSVRYCYL---------------KAVAERHGDQRVYGLH-YIGPV-AGEVIQ 442 (483)
T ss_dssp ---------------EEECCCGGGTTTTCCCTTCEE---------------EEEEESSTTCBEEEEE-EEETT-HHHHHH
T ss_pred ---------------EEeecchhhhhhccCCCcEEE---------------EEEEecCCCCEEEEEE-EECCC-HHHHHH
Confidence 1222232 233334 8888 44 89999999 55543 345555
Q ss_pred CCCCCCcchhhhhhhhHH
Q 008662 238 FDPNDPIVPFVVFLGTSA 255 (558)
Q Consensus 238 f~~~~PVla~aI~~g~t~ 255 (558)
.+++++..+++.
T Consensus 443 ------~~~~ai~~~~t~ 454 (483)
T 3dgh_A 443 ------GFAAALKSGLTI 454 (483)
T ss_dssp ------HHHHHHHTTCBH
T ss_pred ------HHHHHHHCCCCH
Confidence 444444444443
No 91
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=95.57 E-value=0.0012 Score=69.60 Aligned_cols=108 Identities=11% Similarity=-0.074 Sum_probs=66.2
Q ss_pred hhhhhhhHHHhhHhhhhhhhhhHhhhHHHHHHHhhcccccc-ccc-ccccccc-ceeccccchhhhhhhhccceeeeehh
Q 008662 92 SMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSS-IDQ-TGGSAGS-KLTNFSTDLKEASSKATVAAVDVLRN 168 (558)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~a~~~~r~~~d~~~~g~~~~-~~~-~~~~~~~-~~t~astgl~e~~~~~~~~~~~~~~~ 168 (558)
.|+-++++... ......|.+|||.+|+|++|+.... ++- .+...+. ....+++|++|+.+++.|++|.+.+
T Consensus 303 ~IyA~GD~~~~-----~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~- 376 (464)
T 2a8x_A 303 HIYAIGDVNGL-----LQLAHVAEAQGVVAAETIAGAETLTLGDHRMLPRATFCQPNVASFGLTEQQARNEGYDVVVAK- 376 (464)
T ss_dssp TEEECGGGGCS-----SCSHHHHHHHHHHHHHHHHTCCCCCCCCGGGSCEEECSSSEEEEEECCHHHHHHTTCCEEEEE-
T ss_pred CEEEeECcCCC-----ccCHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEEECCCCeEEEcCCHHHHHhcCCCEEEEE-
Confidence 35555665431 2245679999999999999524444 221 1111111 1568999999999999999877722
Q ss_pred chhcccceeccCCceeeEccCCCccCCChhHHHhhhhhhhhcceee-ccccchhhHHHHHHH
Q 008662 169 TIVALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLW-RPVGSALQQQVSVAI 229 (558)
Q Consensus 169 ~~~~~~~~~~~~~~~~~y~pg~~~~~l~p~ik~~~~~~~~~~k~i~-~~~G~ilgaQv~~g~ 229 (558)
.......++.++ |.....+ |+|+ +..|+++|+| ++|-
T Consensus 377 -------~~~~~~~~~~~~-~~~~~~~---------------k~~~~~~~~~ilG~~-~~g~ 414 (464)
T 2a8x_A 377 -------FPFTANAKAHGV-GDPSGFV---------------KLVADAKHGELLGGH-LVGH 414 (464)
T ss_dssp -------EEGGGCHHHHHH-TCCCCEE---------------EEEEETTTTEEEEEE-EEET
T ss_pred -------EEcchhhhhhhc-CCCcEEE---------------EEEEECCCCEEEEEE-EECc
Confidence 111123333333 5555555 8888 5689999998 4443
No 92
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=95.38 E-value=0.0019 Score=69.07 Aligned_cols=119 Identities=12% Similarity=0.002 Sum_probs=71.9
Q ss_pred hhhhhhhHHHhhHhhhhhhhhhHhhhHHHHHHHhhccccccccccccccccc---eeccccchhhhhhhhccceeeeehh
Q 008662 92 SMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSK---LTNFSTDLKEASSKATVAAVDVLRN 168 (558)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~a~~~~r~~~d~~~~g~~~~~~~~~~~~~~~---~t~astgl~e~~~~~~~~~~~~~~~ 168 (558)
.|+-++++.. ....+..|.+|||.+|+|++| .........+..... ...+++|++|+.+++.+..|++.
T Consensus 324 ~IyA~GD~~~-----~~~l~~~A~~~g~~aa~~i~g-~~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~v~-- 395 (495)
T 2wpf_A 324 NIYAIGDITD-----RLMLTPVAINEGAALVDTVFG-NKPRKTDHTRVASAVFSIPPIGTCGLIEEVAAKEFEKVAVY-- 395 (495)
T ss_dssp TEEECGGGGC-----SCCCHHHHHHHHHHHHHHHHS-SCCCCCCCSSCEEEECCSSCEEEEECCHHHHHHHSSEEEEE--
T ss_pred CEEEEeccCC-----CccCHHHHHHHHHHHHHHhcC-CCCCcCCCCCCCEEEECCCCeEEEeCCHHHHHhcCCCEEEE--
Confidence 3556666652 123566899999999999995 332222222222222 56889999999998887666551
Q ss_pred chhcccceeccCCceeeEcc------C-CCccC-CChhHHHhhhhhhhhcceee-ccccchhhHHHHHHHHHHHHhcCCC
Q 008662 169 TIVALEESMTNGASFVVYYY------G-TTKES-LPPEIRDALNLYEDRAVKLW-RPVGSALQQQVSVAIEGLERSLGFD 239 (558)
Q Consensus 169 ~~~~~~~~~~~~~~~~~y~p------g-~~~~~-l~p~ik~~~~~~~~~~k~i~-~~~G~ilgaQv~~g~~gvdkrigf~ 239 (558)
+..|++ + ..... + |+|+ +..|++||+| ++|-+ ...++.
T Consensus 396 --------------~~~~~~~~~~~~~~~~~~~~~---------------klv~~~~~~~ilG~~-~~g~~-a~~~i~-- 442 (495)
T 2wpf_A 396 --------------MSSFTPLMHNISGSKYKKFVA---------------KIVTNHSDGTVLGVH-LLGDG-APEIIQ-- 442 (495)
T ss_dssp --------------EEEECCTHHHHHSCTTCCEEE---------------EEEEETTTCBEEEEE-EESTT-HHHHHH--
T ss_pred --------------EEecCchhhhhhcCCCcEEEE---------------EEEEECCCCEEEEEE-EECCC-HHHHHH--
Confidence 112222 2 33333 4 8888 6789999998 55533 455555
Q ss_pred CCCCcchhhhhhhhHH
Q 008662 240 PNDPIVPFVVFLGTSA 255 (558)
Q Consensus 240 ~~~PVla~aI~~g~t~ 255 (558)
.++.++..+.+.
T Consensus 443 ----~~~~ai~~~~t~ 454 (495)
T 2wpf_A 443 ----AVGVCLRLNAKI 454 (495)
T ss_dssp ----HHHHHHHTTCBH
T ss_pred ----HHHHHHHCCCCH
Confidence 444444444443
No 93
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=95.33 E-value=0.002 Score=67.85 Aligned_cols=127 Identities=6% Similarity=0.005 Sum_probs=75.4
Q ss_pred hhhhhhhHHHhhHhhhhhhhhhHhhhHHHHHHHhhcccccc-cc-ccccccccc-eeccccchhhhhhhhc-c-ceeeee
Q 008662 92 SMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSS-ID-QTGGSAGSK-LTNFSTDLKEASSKAT-V-AAVDVL 166 (558)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~a~~~~r~~~d~~~~g~~~~-~~-~~~~~~~~~-~t~astgl~e~~~~~~-~-~~~~~~ 166 (558)
.|+-++++... ......|.+|||.+|+|++|+.... .+ ..+.+.+.- ...+++|++|+.+++. | ..+++
T Consensus 297 ~IyA~GD~~~~-----~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~~g~~~~~~- 370 (450)
T 1ges_A 297 GIYAVGDNTGA-----VELTPVAVAAGRRLSERLFNNKPDEHLDYSNIPTVVFSHPPIGTVGLTEPQAREQYGDDQVKV- 370 (450)
T ss_dssp TEEECSGGGTS-----CCCHHHHHHHHHHHHHHHHTTCTTCCCCCSSCCEEECCSSCEEEEECCHHHHHHHHCGGGEEE-
T ss_pred CEEEEeccCCC-----CccHHHHHHHHHHHHHHHcCCCCcccCCCCCCCeEEECCCceEEEeCCHHHHHhcCCCCcEEE-
Confidence 35556665421 2345679999999999999643221 11 122222221 5688999999998886 4 55555
Q ss_pred hhchhcccceeccCCceeeEccCCCccCCChhHHHhhhhhhhhcceee-ccccchhhHHHHHHHHHHHHhcCCCCCCCcc
Q 008662 167 RNTIVALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLW-RPVGSALQQQVSVAIEGLERSLGFDPNDPIV 245 (558)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~y~pg~~~~~l~p~ik~~~~~~~~~~k~i~-~~~G~ilgaQv~~g~~gvdkrigf~~~~PVl 245 (558)
+...+ .+..++ ++++.....+ |+|+ +.+|++||+| ++|-+ ...++. .+
T Consensus 371 ------~~~~~-~~~~~~-~~~~~~~~~~---------------k~~~~~~~~~ilG~~-~~g~~-a~~~i~------~~ 419 (450)
T 1ges_A 371 ------YKSSF-TAMYTA-VTTHRQPCRM---------------KLVCVGSEEKIVGIH-GIGFG-MDEMLQ------GF 419 (450)
T ss_dssp ------EEEEE-ECHHHH-TSSSCCEEEE---------------EEEEETTTTEEEEEE-EESTT-HHHHHH------HH
T ss_pred ------EEEEC-chhhHH-HhcCCCcEEE---------------EEEEECCCCEEEEEE-EECCC-HHHHHH------HH
Confidence 11122 122333 2567666666 8888 6789999998 55532 555555 44
Q ss_pred hhhhhhhhHH
Q 008662 246 PFVVFLGTSA 255 (558)
Q Consensus 246 a~aI~~g~t~ 255 (558)
++++..+.+.
T Consensus 420 ~~ai~~~~t~ 429 (450)
T 1ges_A 420 AVALKMGATK 429 (450)
T ss_dssp HHHHHTTCBH
T ss_pred HHHHHCCCCH
Confidence 4444444443
No 94
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=95.32 E-value=0.0023 Score=68.14 Aligned_cols=109 Identities=9% Similarity=-0.025 Sum_probs=67.4
Q ss_pred hhhhhhhHHHhhHhhhhhhhhhHhhhHHHHHHHhhcccccccc-cccccccc-ceeccccchhhhhhhhccceeeeehhc
Q 008662 92 SMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSID-QTGGSAGS-KLTNFSTDLKEASSKATVAAVDVLRNT 169 (558)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~a~~~~r~~~d~~~~g~~~~~~-~~~~~~~~-~~t~astgl~e~~~~~~~~~~~~~~~~ 169 (558)
.|+-++++..- ......|.+|||.+|++++|+....++ ..+...+. ....+++|++|..+++.|++|.+.+
T Consensus 311 ~IyA~GD~~~~-----~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~-- 383 (499)
T 1xdi_A 311 GIYAAGDCTGL-----LPLASVAAMQGRIAMYHALGEGVSPIRLRTVAATVFTRPEIAAVGVPQSVIDAGSVAARTIM-- 383 (499)
T ss_dssp TEEECSGGGTS-----CSCHHHHHHHHHHHHHHHTTCCCCCCCGGGCEEEECSSSEEEEEESCHHHHHHTSSCEEEEE--
T ss_pred CEEEEeccCCC-----cccHHHHHHHHHHHHHHhcCCCCccCCCCCCcEEEEecCCceEeCCCHHHHHhCCCCEEEEE--
Confidence 35555665431 234567999999999999953123332 12222221 2668999999999999999987722
Q ss_pred hhcccceeccCCceeeEccCCCccCCChhHHHhhhhhhhhcceee-ccccchhhHHHHHHHH
Q 008662 170 IVALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLW-RPVGSALQQQVSVAIE 230 (558)
Q Consensus 170 ~~~~~~~~~~~~~~~~y~pg~~~~~l~p~ik~~~~~~~~~~k~i~-~~~G~ilgaQv~~g~~ 230 (558)
.. .....++. ++|.....+ |+|+ +..|+++|+| ++|-.
T Consensus 384 -----~~-~~~~~~~~-~~~~~~g~~---------------k~~~~~~~~~ilG~~-~~g~~ 422 (499)
T 1xdi_A 384 -----LP-LRTNARAK-MSEMRHGFV---------------KIFCRRSTGVVIGGV-VVAPI 422 (499)
T ss_dssp -----EE-STTSHHHH-HTTCSSCEE---------------EEEEETTTCBEEEEE-EEETT
T ss_pred -----Ee-cCccccee-ecCCCceEE---------------EEEEECCCCEEEEEE-EECCc
Confidence 11 11223332 346655555 8888 4589999998 44443
No 95
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=95.32 E-value=0.0023 Score=67.60 Aligned_cols=107 Identities=11% Similarity=-0.061 Sum_probs=66.7
Q ss_pred hhhhhhhHHHhhHhhhhhhhhhHhhhHHHHHHHhhccccccccc-cccccc-cceeccccchhhhhhhhccceeeeehhc
Q 008662 92 SMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQ-TGGSAG-SKLTNFSTDLKEASSKATVAAVDVLRNT 169 (558)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~a~~~~r~~~d~~~~g~~~~~~~-~~~~~~-~~~t~astgl~e~~~~~~~~~~~~~~~~ 169 (558)
.|+-++++..- ......|.+|||.+|+|++| ....++. .+-..+ .....+++|++|+.+++.|++|.+.+
T Consensus 314 ~IyA~GD~~~~-----~~~~~~A~~~g~~aa~~i~~-~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~-- 385 (474)
T 1zmd_A 314 NIYAIGDVVAG-----PMLAHKAEDEGIICVEGMAG-GAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGK-- 385 (474)
T ss_dssp TEEECGGGSSS-----CCCHHHHHHHHHHHHHHHTT-CCCCCCGGGCCEEECSSSEEEEEECCHHHHHHHTCCEEEEE--
T ss_pred CEEEeeecCCC-----CccHHHHHHHHHHHHHHhcC-CCCcCCCCCCCEEEECCCCeEEEeCCHHHHHhcCCCEEEEE--
Confidence 35555665431 23456799999999999995 4443432 122221 12568999999999999999877722
Q ss_pred hhcccceeccCCceeeEccCCCccCCChhHHHhhhhhhhhcceee-ccccchhhHHHHHHH
Q 008662 170 IVALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLW-RPVGSALQQQVSVAI 229 (558)
Q Consensus 170 ~~~~~~~~~~~~~~~~y~pg~~~~~l~p~ik~~~~~~~~~~k~i~-~~~G~ilgaQv~~g~ 229 (558)
.. .....++.+ .|.....+ |+|+ +..|+++|+| ++|-
T Consensus 386 -----~~-~~~~~~~~~-~~~~~~~~---------------k~~~~~~~~~ilG~~-~~g~ 423 (474)
T 1zmd_A 386 -----FP-FAANSRAKT-NADTDGMV---------------KILGQKSTDRVLGAH-ILGP 423 (474)
T ss_dssp -----EE-GGGCHHHHH-TTCCCCEE---------------EEEEETTTCBEEEEE-EEET
T ss_pred -----Ee-cccchhhhh-cCCCcEEE---------------EEEEECCCCEEEEEE-EECC
Confidence 11 112333333 35555555 8888 5689999998 4443
No 96
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=95.30 E-value=0.0031 Score=66.96 Aligned_cols=126 Identities=7% Similarity=-0.016 Sum_probs=73.9
Q ss_pred hhhhhhhHHHhhHhhhhhhhhhHhhhHHHHHHHhhcccccccccccc-----ccccc-eeccccchhhhhhhhc-c-cee
Q 008662 92 SMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGG-----SAGSK-LTNFSTDLKEASSKAT-V-AAV 163 (558)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~a~~~~r~~~d~~~~g~~~~~~~~~~-----~~~~~-~t~astgl~e~~~~~~-~-~~~ 163 (558)
.|+-++++... ...+..|.+|||.+|+|++| ....|.+... +.+.- ...+++|++|+.+++. | ..|
T Consensus 316 ~IyA~GD~~~~-----~~~~~~A~~~g~~aa~~i~~-~~~~~~~~~~~~~~p~~~~~~~~~~~vGl~e~~a~~~~~~~~~ 389 (479)
T 2hqm_A 316 NIYSLGDVVGK-----VELTPVAIAAGRKLSNRLFG-PEKFRNDKLDYENVPSVIFSHPEAGSIGISEKEAIEKYGKENI 389 (479)
T ss_dssp TEEECGGGTTS-----SCCHHHHHHHHHHHHHHHHS-CGGGTTCCCCCTTCCEEECCSSCEEEEECCHHHHHHHHCGGGE
T ss_pred CEEEEEecCCC-----cccHHHHHHHHHHHHHHhcC-CCccCcccCCCCCCCeEEECCCCeEEEeCCHHHHHhcCCCCcE
Confidence 35556666321 23466899999999999995 3322332222 22221 4588999999998876 4 234
Q ss_pred eeehhchhcccceeccCCceeeEccCCCccCCChhHHHhhhhhhhhcceee-ccccchhhHHHHHHHHHHHHhcCCCCCC
Q 008662 164 DVLRNTIVALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLW-RPVGSALQQQVSVAIEGLERSLGFDPND 242 (558)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~y~pg~~~~~l~p~ik~~~~~~~~~~k~i~-~~~G~ilgaQv~~g~~gvdkrigf~~~~ 242 (558)
++ +...+ .+..++ +++|.....+ |+|+ +.+|++||+| ++|-. ...++.
T Consensus 390 ~~-------~~~~~-~~~~~~-~~~~~~~~~~---------------kli~~~~~~~ilG~~-~~g~~-a~~~i~----- 438 (479)
T 2hqm_A 390 KV-------YNSKF-TAMYYA-MLSEKSPTRY---------------KIVCAGPNEKVVGLH-IVGDS-SAEILQ----- 438 (479)
T ss_dssp EE-------EEEEE-CCGGGG-GCSSCCCEEE---------------EEEEETTTTEEEEEE-EESTT-HHHHHH-----
T ss_pred EE-------EEEec-cHHHHH-hhcCCCcEEE---------------EEEEECCCCEEEEEE-EECCC-HHHHHH-----
Confidence 44 11111 122222 2567766666 8888 5789999998 55533 555555
Q ss_pred CcchhhhhhhhHH
Q 008662 243 PIVPFVVFLGTSA 255 (558)
Q Consensus 243 PVla~aI~~g~t~ 255 (558)
.+++++..+.+.
T Consensus 439 -~~~~ai~~~~t~ 450 (479)
T 2hqm_A 439 -GFGVAIKMGATK 450 (479)
T ss_dssp -HHHHHHHTTCBH
T ss_pred -HHHHHHHCCCCH
Confidence 444444444433
No 97
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=95.05 E-value=0.0033 Score=66.52 Aligned_cols=114 Identities=8% Similarity=0.018 Sum_probs=68.1
Q ss_pred hhhhhhhHHHhhHhhhhhhhhhHhhhHHHHHHHhhccccc---cccccccccccc-eeccccchhhhhhhhc-cceeeee
Q 008662 92 SMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFS---SIDQTGGSAGSK-LTNFSTDLKEASSKAT-VAAVDVL 166 (558)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~a~~~~r~~~d~~~~g~~~---~~~~~~~~~~~~-~t~astgl~e~~~~~~-~~~~~~~ 166 (558)
.|+-++++.. . ......|.+|||.+|+|++|+... .+. .+.+.+.- ...+++|++|+.+++. |..+++.
T Consensus 296 ~Iya~GD~~~----~-~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~-~~p~~~~~~~~~a~vGl~e~~a~~~~g~~~~~~ 369 (463)
T 2r9z_A 296 GVYALGDITG----R-DQLTPVAIAAGRRLAERLFDGQSERKLDYD-NIPTVVFAHPPLSKVGLSEPEARERLGDVLTVY 369 (463)
T ss_dssp TEEECGGGGT----S-CCCHHHHHHHHHHHHHHHHSCCTTCCCCCS-SCCEEECCSSCEEEEECCHHHHHHHHCSCEEEE
T ss_pred CEEEEeecCC----C-cccHHHHHHHHHHHHHHHcCCCCcccCCCC-CCCEEEeCCCCeEEEcCCHHHHHhcCCCCEEEE
Confidence 3555566532 1 234567999999999999953322 122 22222222 5688999999998876 5666652
Q ss_pred hhchhcccceeccCCceeeEccCCCccCCChhHHHhhhhhhhhcceee-ccccchhhHHHHHHHHHHHHhcC
Q 008662 167 RNTIVALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLW-RPVGSALQQQVSVAIEGLERSLG 237 (558)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~y~pg~~~~~l~p~ik~~~~~~~~~~k~i~-~~~G~ilgaQv~~g~~gvdkrig 237 (558)
+ ..+ .+..++ ++++.....+ |+|+ ...|+++|+| ++|- ....++.
T Consensus 370 ~-------~~~-~~~~~~-~~~~~~~~~~---------------klv~~~~~~~ilG~~-~~g~-~a~~~i~ 415 (463)
T 2r9z_A 370 E-------TSF-TPMRYA-LNEHGPKTAM---------------KLVCAGPEQRVVGVH-VIGD-GADEMLQ 415 (463)
T ss_dssp E-------EEE-CCGGGT-TSSSCCCEEE---------------EEEEETTTTEEEEEE-EEST-TGGGTSH
T ss_pred E-------EEc-ccchhh-hhcCCCcEEE---------------EEEEECCCCEEEEEE-EECC-CHHHHHH
Confidence 1 111 122232 2566666656 8888 6789999998 5453 2444444
No 98
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=95.00 E-value=0.0029 Score=66.62 Aligned_cols=92 Identities=13% Similarity=-0.020 Sum_probs=58.6
Q ss_pred hhhhHhhhHHHHHHHhhccccccccccccccc--cceeccccchhhhhhhhccceeeeehhchhcccceeccCCceeeEc
Q 008662 110 SLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAG--SKLTNFSTDLKEASSKATVAAVDVLRNTIVALEESMTNGASFVVYY 187 (558)
Q Consensus 110 ~~~~a~~~~r~~~d~~~~g~~~~~~~~~~~~~--~~~t~astgl~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 187 (558)
.+..|.+|||.+|+|+.++ ...++...-... .....+++|++|..++..|++|.+ ......+...++
T Consensus 316 ~~~~A~~~g~~aa~~i~~~-~~~~~~~~~p~~~~~~~~~a~vG~~~~~a~~~g~~~~~----------~~~~~~~~~~~~ 384 (467)
T 1zk7_A 316 FVYVAAAAGTRAAINMTGG-DAALDLTAMPAVVFTDPQVATVGYSEAEAHHDGIETDS----------RTLTLDNVPRAL 384 (467)
T ss_dssp CHHHHHHHHHHHHHHHTTC-CCCCCCTTCEEEECSSSEEEEEECCHHHHHHTTCCEEE----------EEEEGGGCHHHH
T ss_pred cHHHHHHHHHHHHHHHcCC-CcccCCCCCCEEEecCCceEEEecCHHHHHhcCCCeEE----------EEEecccchhhh
Confidence 4667999999999999963 433332221111 115688999999999999998777 221111111222
Q ss_pred -cCCCccCCChhHHHhhhhhhhhcceee-ccccchhhHHHHHH
Q 008662 188 -YGTTKESLPPEIRDALNLYEDRAVKLW-RPVGSALQQQVSVA 228 (558)
Q Consensus 188 -pg~~~~~l~p~ik~~~~~~~~~~k~i~-~~~G~ilgaQv~~g 228 (558)
.+.....+ |+++ +.+|+++|+| ++|
T Consensus 385 ~~~~~~~~~---------------kl~~~~~~~~ilG~~-~~g 411 (467)
T 1zk7_A 385 ANFDTRGFI---------------KLVIEEGSHRLIGVQ-AVA 411 (467)
T ss_dssp HTTCCCCEE---------------EEEEETTTCBEEEEE-EEE
T ss_pred hcCCCcEEE---------------EEEEECCCCEEEEEE-EEC
Confidence 24444545 8888 5689999988 443
No 99
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=94.60 E-value=0.0046 Score=66.02 Aligned_cols=68 Identities=10% Similarity=-0.043 Sum_probs=45.2
Q ss_pred hhhhhhhHHHhhHhhhhhhhhhHhhhHHHHHHHhhccccccccccccccccc---eeccccchhhhhhhhccceeee
Q 008662 92 SMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSK---LTNFSTDLKEASSKATVAAVDV 165 (558)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~a~~~~r~~~d~~~~g~~~~~~~~~~~~~~~---~t~astgl~e~~~~~~~~~~~~ 165 (558)
.|+-++++... ...+..|.+|||.+|+|++| ....+....+..... ...+++|++|+.+++.+..+++
T Consensus 320 ~IyA~GD~~~~-----~~l~~~A~~~g~~aa~~i~g-~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~~~~~~~ 390 (490)
T 1fec_A 320 NIYAIGDVTDR-----VMLTPVAINEGAAFVDTVFA-NKPRATDHTKVACAVFSIPPMGVCGYVEEDAAKKYDQVAV 390 (490)
T ss_dssp TEEECGGGGCS-----CCCHHHHHHHHHHHHHHHHS-SCCCCCCCSSCCEEECCSSCEEEEECCHHHHHHHCSEEEE
T ss_pred CEEEEeccCCC-----ccCHHHHHHHHHHHHHHhcC-CCCCcCCCCCccEEEECCCCeEEEeCCHHHHHhcCCCEEE
Confidence 35566666521 23567899999999999995 332223333333333 5688999999999888766555
No 100
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=94.35 E-value=0.0056 Score=67.05 Aligned_cols=68 Identities=7% Similarity=-0.023 Sum_probs=43.2
Q ss_pred hhhhhhHHHhhHhhhhhhhhhHhhhHHHHHHHhhccccccccccccccccc---eeccccchhhhhhhhccceeee
Q 008662 93 MIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSK---LTNFSTDLKEASSKATVAAVDV 165 (558)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~a~~~~r~~~d~~~~g~~~~~~~~~~~~~~~---~t~astgl~e~~~~~~~~~~~~ 165 (558)
|+-.+|+.. ..---..-|++|||++++|++|+....++ .......- ...|++||+|+.+++.++++.+
T Consensus 353 IyAiGDv~~----~~p~La~~A~~eg~~aa~~i~g~~~~~~d-~~~iP~~vft~PeiA~VGlTE~eA~~~g~~~~v 423 (542)
T 4b1b_A 353 IFAVGDVAE----NVPELAPVAIKAGEILARRLFKDSDEIMD-YSYIPTSIYTPIEYGACGYSEEKAYELYGKSNV 423 (542)
T ss_dssp EEECTTSBT----TCCCCHHHHHHHHHHHHHHHHSCCCCCCC-CSSCCEEECSSSCEEEEECCHHHHHHHHCTTTE
T ss_pred eEEeccccC----CchhHHHHHHHHHHHHHHHHhcCCCcccC-CCCCceEEeCCCCeEEEeCCHHHHHHhCCCCcE
Confidence 555565542 11123457899999999999964333222 11111222 4589999999999999877655
No 101
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=94.26 E-value=0.0058 Score=64.44 Aligned_cols=103 Identities=9% Similarity=-0.103 Sum_probs=63.1
Q ss_pred hhhhhhhHHHhhHhhhhhhhhhHhhhHHHHHHHhhcccccc--ccccccccccceeccccchhhhhhhhccceeeeehhc
Q 008662 92 SMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSS--IDQTGGSAGSKLTNFSTDLKEASSKATVAAVDVLRNT 169 (558)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~a~~~~r~~~d~~~~g~~~~--~~~~~~~~~~~~t~astgl~e~~~~~~~~~~~~~~~~ 169 (558)
.|+-++++... ......|.+|||.+|+|++| .... +..+--.--.....+++|++|+.+++.|++|.+.+
T Consensus 319 ~IyA~GD~~~~-----~~~~~~A~~~g~~aa~~i~~-~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~-- 390 (478)
T 1v59_A 319 HIKVVGDVTFG-----PMLAHKAEEEGIAAVEMLKT-GHGHVNYNNIPSVMYSHPEVAWVGKTEEQLKEAGIDYKIGK-- 390 (478)
T ss_dssp TEEECGGGSSS-----CCCHHHHHHHHHHHHHHHHH-SCCCCCTTSCCEEECSSSEEEEEECCHHHHHHTTCCEEEEE--
T ss_pred CEEEeeccCCC-----cccHHHHHHHHHHHHHHHcC-CCCCCCCCCCCEEEEcCCcEEEEECCHHHHHHcCCCEEEEE--
Confidence 34555555431 12356899999999999995 4332 22221111111568999999999999998877721
Q ss_pred hhcccceeccCCceeeEccCCCccCCChhHHHhhhhhhhhcceee-ccccchhhHH
Q 008662 170 IVALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLW-RPVGSALQQQ 224 (558)
Q Consensus 170 ~~~~~~~~~~~~~~~~y~pg~~~~~l~p~ik~~~~~~~~~~k~i~-~~~G~ilgaQ 224 (558)
.-.....++.++ |.....+ |+|+ +..|+++|+|
T Consensus 391 ------~~~~~~~~~~~~-~~~~~~~---------------k~~~~~~~~~ilG~~ 424 (478)
T 1v59_A 391 ------FPFAANSRAKTN-QDTEGFV---------------KILIDSKTERILGAH 424 (478)
T ss_dssp ------EEGGGCHHHHHT-TCCCCEE---------------EEEEETTTCBEEEEE
T ss_pred ------Eecccchhhhhc-CCCcEEE---------------EEEEECCCCEEEEEE
Confidence 111122333333 4444445 8888 5689999988
No 102
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=93.84 E-value=0.0072 Score=63.73 Aligned_cols=103 Identities=5% Similarity=-0.126 Sum_probs=64.4
Q ss_pred hhhhhhhHHHhhHhhhhhhhhhHhhhHHHHHHHhhcccccccccccccccc--ceeccccchhhhhhhhccceeeeehhc
Q 008662 92 SMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGS--KLTNFSTDLKEASSKATVAAVDVLRNT 169 (558)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~a~~~~r~~~d~~~~g~~~~~~~~~~~~~~--~~t~astgl~e~~~~~~~~~~~~~~~~ 169 (558)
.|+-++++..- ...+..|.+|||.+|+++.| ....++...-.... ....+++|++|..+++.|++|.+.+
T Consensus 299 ~Iya~GD~~~~-----~~~~~~A~~~g~~aa~~i~g-~~~~~~~~~~p~~~~~~p~~a~vG~~e~~a~~~g~~~~~~~-- 370 (458)
T 1lvl_A 299 NVWAIGDVAGE-----PMLAHRAMAQGEMVAEIIAG-KARRFEPAAIAAVCFTDPEVVVVGKTPEQASQQGLDCIVAQ-- 370 (458)
T ss_dssp TEEECGGGGCS-----SCCHHHHHHHHHHHHHHHTT-CCCCCCCSCCCEEECSSSEEEEEECCHHHHHHTTCCEEEEE--
T ss_pred CEEEeeccCCC-----cccHHHHHHHHHHHHHHhcC-CCccCCCCCCCEEEECCCCeEEEeCCHHHHHHcCCCEEEEE--
Confidence 35555665431 13456799999999999995 54444433211111 1568899999999999999877721
Q ss_pred hhcccceeccCCceeeEccCCCccCCChhHHHhhhhhhhhcceee-ccccchhhHH
Q 008662 170 IVALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLW-RPVGSALQQQ 224 (558)
Q Consensus 170 ~~~~~~~~~~~~~~~~y~pg~~~~~l~p~ik~~~~~~~~~~k~i~-~~~G~ilgaQ 224 (558)
.. .....++.++ |.....+ |+++ +..|+++|+|
T Consensus 371 -----~~-~~~~~~~~~~-~~~~g~~---------------kl~~d~~~~~ilG~~ 404 (458)
T 1lvl_A 371 -----FP-FAANGRAMSL-ESKSGFV---------------RVVARRDNHLILGWQ 404 (458)
T ss_dssp -----EE-GGGCHHHHHT-TCCCCEE---------------EEEEETTTCBEEEEE
T ss_pred -----EE-Cccchhhhhc-CCCcEEE---------------EEEEECCCCEEEEEE
Confidence 11 1122333332 4444444 7888 5789999988
No 103
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=92.57 E-value=0.014 Score=61.15 Aligned_cols=90 Identities=14% Similarity=0.035 Sum_probs=57.4
Q ss_pred hhhhHhhhHHHHHHHhhccccccccccccccc--cceeccccchhhhhhhhccceeeeehhchhcccceeccCCceeeEc
Q 008662 110 SLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAG--SKLTNFSTDLKEASSKATVAAVDVLRNTIVALEESMTNGASFVVYY 187 (558)
Q Consensus 110 ~~~~a~~~~r~~~d~~~~g~~~~~~~~~~~~~--~~~t~astgl~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 187 (558)
.+..|.+|||.+|+|+.| ....++...-... .....+++|++|+.+++.|++|.+-+ .......++.++
T Consensus 309 ~~~~A~~~g~~aa~~i~~-~~~~~~~~~~p~~~~~~~~~a~~G~~~~~a~~~g~~~~~~~--------~~~~~~~~~~~~ 379 (455)
T 2yqu_A 309 LAHKASEEGIAAVEHMVR-GFGHVDYQAIPSVVYTHPEIAAVGYTEEELKAQGIPYKVGK--------FPYSASGRARAM 379 (455)
T ss_dssp CHHHHHHHHHHHHHHHHH-SCCCCCGGGCCEEECSSSEEEEEECCHHHHHHHTCCEEEEE--------EEGGGCHHHHHH
T ss_pred CHHHHHHhHHHHHHHHcC-CCccCCCCCCCEEEEcCCceEEEECCHHHHHHcCCCEEEEE--------EEcccchHHHhc
Confidence 455799999999999995 5444443211111 12457899999999999999877621 111122222222
Q ss_pred cCCCccCCChhHHHhhhhhhhhcceee-ccccchhhHH
Q 008662 188 YGTTKESLPPEIRDALNLYEDRAVKLW-RPVGSALQQQ 224 (558)
Q Consensus 188 pg~~~~~l~p~ik~~~~~~~~~~k~i~-~~~G~ilgaQ 224 (558)
|.....+ |+|+ ...|+++|+|
T Consensus 380 -~~~~~~~---------------k~~~~~~~~~ilG~~ 401 (455)
T 2yqu_A 380 -GETEGFI---------------KVLAHAKTDRILGVH 401 (455)
T ss_dssp -TCCCCEE---------------EEEEETTTCBEEEEE
T ss_pred -CCCcEEE---------------EEEEECCCCEEEEEE
Confidence 4444434 7888 5689999988
No 104
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=90.97 E-value=0.04 Score=59.99 Aligned_cols=63 Identities=6% Similarity=-0.022 Sum_probs=40.4
Q ss_pred hhhhhhhHHHhhHhhhhhhhhhHhhhHHHHHHHhhccccccccccccccccc---eeccccchhhhhhhhc
Q 008662 92 SMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSK---LTNFSTDLKEASSKAT 159 (558)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~a~~~~r~~~d~~~~g~~~~~~~~~~~~~~~---~t~astgl~e~~~~~~ 159 (558)
.|+-++++.... ...+..|.+|||.+|+++.|+ ........+..... ...+++||+|..+++.
T Consensus 427 ~VyA~GD~~~~~----~~~~~~A~~~g~~aa~~i~~~-~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~ 492 (598)
T 2x8g_A 427 NVYAIGDINAGK----PQLTPVAIQAGRYLARRLFAG-ATELTDYSNVATTVFTPLEYGACGLSEEDAIEK 492 (598)
T ss_dssp TEEECGGGBTTS----CCCHHHHHHHHHHHHHHHHHC-CCCCCCCTTCCEEECSSSCEEEEECCHHHHHHH
T ss_pred CEEEEeeecCCC----CccHHHHHHhHHHHHHHHhcC-CCcccCCCCCcEEEECCCceEEEeCCHHHHHhh
Confidence 355666664311 124567899999999999964 33332333333333 5688999999988775
No 105
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=80.31 E-value=4.4 Score=35.46 Aligned_cols=27 Identities=33% Similarity=0.454 Sum_probs=19.6
Q ss_pred CCceEEEEeCCCc-hHHH--HHHHHHHccC
Q 008662 354 DRSKVIVMDADGT-RSKG--IARSLRKLGV 380 (558)
Q Consensus 354 kdk~IVVyC~sG~-RS~~--AA~~L~~~Gf 380 (558)
.+.+|+|||..|. ||.. +++.+...|.
T Consensus 80 ~~~~VlVHC~~G~~RS~~~v~ayLm~~~~~ 109 (145)
T 2nt2_A 80 HGSKCLVHSKMGVSRSASTVIAYAMKEYGW 109 (145)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHHHCC
T ss_pred cCCeEEEECCCCCchHHHHHHHHHHHHhCC
Confidence 5689999999994 8854 3555565664
No 106
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=79.89 E-value=1.3 Score=39.10 Aligned_cols=27 Identities=22% Similarity=0.059 Sum_probs=19.2
Q ss_pred CCceEEEEeCCCc-hHHHH--HHHHHHccC
Q 008662 354 DRSKVIVMDADGT-RSKGI--ARSLRKLGV 380 (558)
Q Consensus 354 kdk~IVVyC~sG~-RS~~A--A~~L~~~Gf 380 (558)
.+.+|+|||..|. ||... +..+...|.
T Consensus 88 ~~~~vlVHC~~G~~Rsg~~~~a~l~~~~~~ 117 (157)
T 3rgo_A 88 LGQCVYVHCKAGRSRSATMVAAYLIQVHNW 117 (157)
T ss_dssp TTCEEEEESSSSSSHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEECCCCCChHHHHHHHHHHHHcCC
Confidence 4679999999998 88765 333444555
No 107
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=79.54 E-value=5.4 Score=35.10 Aligned_cols=27 Identities=30% Similarity=0.417 Sum_probs=19.1
Q ss_pred CCceEEEEeCCCc-hHHHH--HHHHHHccC
Q 008662 354 DRSKVIVMDADGT-RSKGI--ARSLRKLGV 380 (558)
Q Consensus 354 kdk~IVVyC~sG~-RS~~A--A~~L~~~Gf 380 (558)
.+.+|+|||..|. ||... +..+...|.
T Consensus 89 ~~~~vlvHC~aG~~RS~~~~~ayl~~~~~~ 118 (154)
T 2r0b_A 89 MGGKVLVHGNAGISRSAAFVIAYIMETFGM 118 (154)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHHTC
T ss_pred cCCCEEEEcCCCCChHHHHHHHHHHHHcCC
Confidence 5689999999995 88753 344455565
No 108
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=78.22 E-value=6.1 Score=34.30 Aligned_cols=28 Identities=29% Similarity=0.217 Sum_probs=18.7
Q ss_pred CCCceEEEEeCCCc-hHHH-HHHHH-HHccC
Q 008662 353 QDRSKVIVMDADGT-RSKG-IARSL-RKLGV 380 (558)
Q Consensus 353 ~kdk~IVVyC~sG~-RS~~-AA~~L-~~~Gf 380 (558)
..+.+|+|||..|. ||.. ++..| ...|.
T Consensus 86 ~~~~~vlVHC~~G~~Rsg~~~a~~l~~~~~~ 116 (150)
T 4erc_A 86 ARGEAVGVHCALGFGRTGTMLACYLVKERGL 116 (150)
T ss_dssp HTTCEEEEECSSSSHHHHHHHHHHHHHHHTC
T ss_pred HCCCCEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence 35689999999997 8864 33333 33554
No 109
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=76.34 E-value=3.4 Score=36.29 Aligned_cols=27 Identities=26% Similarity=0.165 Sum_probs=19.4
Q ss_pred CCceEEEEeCCCc-hHH-H-HHHHHHHccC
Q 008662 354 DRSKVIVMDADGT-RSK-G-IARSLRKLGV 380 (558)
Q Consensus 354 kdk~IVVyC~sG~-RS~-~-AA~~L~~~Gf 380 (558)
.+.+|+|||..|. ||. . ++..+...|.
T Consensus 84 ~~~~vlVHC~aG~~RSg~~~~ayl~~~~~~ 113 (151)
T 2e0t_A 84 PGGKILVHCAVGVSRSATLVLAYLMLYHHL 113 (151)
T ss_dssp TTCCEEEECSSSSHHHHHHHHHHHHHHSCC
T ss_pred CCCcEEEECCCCCChHHHHHHHHHHHHcCC
Confidence 5789999999995 887 3 3445566665
No 110
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=74.02 E-value=7.7 Score=34.70 Aligned_cols=27 Identities=30% Similarity=0.425 Sum_probs=19.7
Q ss_pred CCceEEEEeCCCc-hHHHH--HHHHHHccC
Q 008662 354 DRSKVIVMDADGT-RSKGI--ARSLRKLGV 380 (558)
Q Consensus 354 kdk~IVVyC~sG~-RS~~A--A~~L~~~Gf 380 (558)
.+.+|+|||..|. ||... +..+...|.
T Consensus 88 ~~~~VlVHC~aG~~RSg~~~~ayLm~~~~~ 117 (164)
T 2hcm_A 88 DGGSCLVYCKNGRSRSAAVCTAYLMRHRGH 117 (164)
T ss_dssp TTCEEEEEESSSSHHHHHHHHHHHHHHSCC
T ss_pred cCCEEEEECCCCCchHHHHHHHHHHHHhCC
Confidence 5789999999995 87643 455566665
No 111
>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A*
Probab=72.06 E-value=11 Score=37.94 Aligned_cols=27 Identities=22% Similarity=0.217 Sum_probs=20.7
Q ss_pred CceEEEEeCCCc-hHHH-HHHHHHHccCC
Q 008662 355 RSKVIVMDADGT-RSKG-IARSLRKLGVM 381 (558)
Q Consensus 355 dk~IVVyC~sG~-RS~~-AA~~L~~~Gf~ 381 (558)
+.+|+|||..|. |+-. ++-.|..+|.+
T Consensus 173 ~~pvl~HC~aGkDRTG~~~alll~~~g~~ 201 (296)
T 1ywf_A 173 GRPVLTHCFAGKDRTGFVVALVLEAVGLD 201 (296)
T ss_dssp TCCEEEECSSSSSHHHHHHHHHHHHTTCC
T ss_pred CCCEEEECCCCCccccHHHHHHHHHcCCC
Confidence 789999999997 6655 45556778875
No 112
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A
Probab=71.73 E-value=2.7 Score=37.00 Aligned_cols=27 Identities=11% Similarity=0.113 Sum_probs=19.3
Q ss_pred CCceEEEEeCCCc-hHHHHHHH-HHHccC
Q 008662 354 DRSKVIVMDADGT-RSKGIARS-LRKLGV 380 (558)
Q Consensus 354 kdk~IVVyC~sG~-RS~~AA~~-L~~~Gf 380 (558)
.+.+|+|||..|. |+..++.. |...|.
T Consensus 91 ~~~~vlvHC~aG~~RTg~~~a~~l~~~g~ 119 (151)
T 1xri_A 91 KNHPVLIHCKRGKHRTGCLVGCLRKLQKW 119 (151)
T ss_dssp GGCSEEEECSSSSSHHHHHHHHHHHHTTB
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHhCC
Confidence 4679999999997 87665543 444554
No 113
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=69.16 E-value=15 Score=31.90 Aligned_cols=27 Identities=33% Similarity=0.374 Sum_probs=19.0
Q ss_pred CCceEEEEeCCCc-hHHH--HHHHHHHccC
Q 008662 354 DRSKVIVMDADGT-RSKG--IARSLRKLGV 380 (558)
Q Consensus 354 kdk~IVVyC~sG~-RS~~--AA~~L~~~Gf 380 (558)
.+.+|+|||..|. ||.. ++..+...|.
T Consensus 80 ~~~~VlVHC~~G~~RS~~~~~aylm~~~~~ 109 (144)
T 3ezz_A 80 CRGRVLVHSQAGISRSATICLAYLMMKKRV 109 (144)
T ss_dssp TTCCEEEEESSSSSHHHHHHHHHHHHHHTC
T ss_pred cCCeEEEECCCCCChhHHHHHHHHHHHcCC
Confidence 5679999999997 7764 3344455665
No 114
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=68.71 E-value=13 Score=32.12 Aligned_cols=19 Identities=26% Similarity=0.079 Sum_probs=15.0
Q ss_pred CCceEEEEeCCCc-hHHHHH
Q 008662 354 DRSKVIVMDADGT-RSKGIA 372 (558)
Q Consensus 354 kdk~IVVyC~sG~-RS~~AA 372 (558)
.+.+|+|||..|. ||...+
T Consensus 88 ~~~~vlVHC~aG~~Rsg~~~ 107 (151)
T 2img_A 88 RGEAVGVHCALGFGRTGTML 107 (151)
T ss_dssp TTCEEEEECSSSSSHHHHHH
T ss_pred CCCcEEEECCCCCChHHHHH
Confidence 5789999999997 775544
No 115
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=68.39 E-value=11 Score=33.72 Aligned_cols=27 Identities=19% Similarity=0.142 Sum_probs=18.8
Q ss_pred CCceEEEEeCCCc-hHHHH--HHHHHHccC
Q 008662 354 DRSKVIVMDADGT-RSKGI--ARSLRKLGV 380 (558)
Q Consensus 354 kdk~IVVyC~sG~-RS~~A--A~~L~~~Gf 380 (558)
.+.+|+|||..|. ||... |..+...|.
T Consensus 82 ~~~~VlVHC~aG~~RSg~~~~ayLm~~~~~ 111 (165)
T 1wrm_A 82 RGESCLVHCLAGVSRSVTLVIAYIMTVTDF 111 (165)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHTSSC
T ss_pred CCCeEEEECCCCCChhHHHHHHHHHHHcCC
Confidence 5789999999995 88763 344444454
No 116
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=67.77 E-value=18 Score=31.56 Aligned_cols=27 Identities=19% Similarity=0.226 Sum_probs=19.0
Q ss_pred CCceEEEEeCCCc-hHHH--HHHHHHHccC
Q 008662 354 DRSKVIVMDADGT-RSKG--IARSLRKLGV 380 (558)
Q Consensus 354 kdk~IVVyC~sG~-RS~~--AA~~L~~~Gf 380 (558)
.+.+|+|||..|. ||.. ++..+...|.
T Consensus 80 ~~~~VlVHC~~G~sRS~~~v~ayLm~~~~~ 109 (144)
T 3s4e_A 80 KDGVVLVHSNAGVSRAAAIVIGFLMNSEQT 109 (144)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHHCC
T ss_pred cCCeEEEEcCCCCchHHHHHHHHHHHHcCC
Confidence 5679999999997 7644 3444555665
No 117
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}
Probab=64.81 E-value=14 Score=35.28 Aligned_cols=27 Identities=26% Similarity=0.327 Sum_probs=19.6
Q ss_pred CCceEEEEeCCCc-hHHH--HHHHHHHccC
Q 008662 354 DRSKVIVMDADGT-RSKG--IARSLRKLGV 380 (558)
Q Consensus 354 kdk~IVVyC~sG~-RS~~--AA~~L~~~Gf 380 (558)
.+.+|+|||..|. ||.. +++.++..|.
T Consensus 82 ~~~~VLVHC~aG~sRSgtvv~AYLm~~~g~ 111 (211)
T 2g6z_A 82 KGGKVLVHSEAGISRSPTICMAYLMKTKQF 111 (211)
T ss_dssp TTCCEEEEESSSSSHHHHHHHHHHHHHHCC
T ss_pred cCCeEEEECCCCCCcHHHHHHHHHHHHcCC
Confidence 5789999999995 8864 3455555664
No 118
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=64.77 E-value=19 Score=31.90 Aligned_cols=27 Identities=22% Similarity=0.299 Sum_probs=19.3
Q ss_pred CCceEEEEeCCCc-hHHH--HHHHHHHccC
Q 008662 354 DRSKVIVMDADGT-RSKG--IARSLRKLGV 380 (558)
Q Consensus 354 kdk~IVVyC~sG~-RS~~--AA~~L~~~Gf 380 (558)
.+.+|+|||..|. ||.. ++..+...|.
T Consensus 83 ~~~~VlVHC~aG~~RSg~~~~aylm~~~~~ 112 (160)
T 1yz4_A 83 NGGNCLVHSFAGISRSTTIVTAYVMTVTGL 112 (160)
T ss_dssp TTCCEEEEETTSSSHHHHHHHHHHHHHHCC
T ss_pred cCCeEEEECCCCCchHHHHHHHHHHHHcCC
Confidence 5689999999994 8864 3444455665
No 119
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=63.48 E-value=13 Score=32.45 Aligned_cols=27 Identities=19% Similarity=0.217 Sum_probs=19.0
Q ss_pred CCceEEEEeCCCc-hHHHH--HHHHHHccC
Q 008662 354 DRSKVIVMDADGT-RSKGI--ARSLRKLGV 380 (558)
Q Consensus 354 kdk~IVVyC~sG~-RS~~A--A~~L~~~Gf 380 (558)
.+.+|+|||..|. ||... +..+...|.
T Consensus 82 ~~~~VlVHC~~G~~RSg~~~~ayl~~~~~~ 111 (149)
T 1zzw_A 82 CGKGLLIHCQAGVSRSATIVIAYLMKHTRM 111 (149)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHHSCC
T ss_pred cCCeEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence 5789999999994 88764 344455554
No 120
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*
Probab=63.12 E-value=15 Score=33.20 Aligned_cols=26 Identities=23% Similarity=0.319 Sum_probs=19.0
Q ss_pred CceEEEEeCCCc-hHHH-H-HHHHHHccC
Q 008662 355 RSKVIVMDADGT-RSKG-I-ARSLRKLGV 380 (558)
Q Consensus 355 dk~IVVyC~sG~-RS~~-A-A~~L~~~Gf 380 (558)
+.+|+|||..|. ||.. + +..+...|.
T Consensus 115 ~~~VlVHC~~G~~RSg~~v~ayLm~~~~~ 143 (183)
T 3f81_A 115 NGRVLVHCREGYSRSPTLVIAYLMMRQKM 143 (183)
T ss_dssp TCCEEEECSSSSSHHHHHHHHHHHHHHCC
T ss_pred CCeEEEECCCCcchHHHHHHHHHHHHhCC
Confidence 689999999997 8766 3 334456666
No 121
>1v8c_A MOAD related protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, protein binding; 1.60A {Thermus thermophilus} SCOP: d.15.3.1 d.129.5.1
Probab=62.28 E-value=0.94 Score=42.42 Aligned_cols=27 Identities=11% Similarity=0.004 Sum_probs=22.6
Q ss_pred cEEEEcCChhhHhhCCCCCccccccccccccCcccccch
Q 008662 288 AVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGS 326 (558)
Q Consensus 288 avLIDVRs~~Ef~~GHIPGA~gai~~d~~nIPL~eL~~~ 326 (558)
.+|||||++.||. |||+ |+|...+.-+
T Consensus 122 ~~liDvRe~~E~~----pgA~--------~iprg~lE~~ 148 (168)
T 1v8c_A 122 GAVVRFREVEPLK----VGSL--------SIPQLRVEVE 148 (168)
T ss_dssp TEEEEEEEEEEEE----ETTE--------EEEEEEEEEE
T ss_pred eEEEECCChhhcC----CCCE--------EcChhHHHHh
Confidence 4999999999999 9998 9997665543
No 122
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Probab=60.53 E-value=16 Score=33.56 Aligned_cols=28 Identities=21% Similarity=0.195 Sum_probs=18.9
Q ss_pred CCCceEEEEeCCCc-hHHHH-HHHHHHccC
Q 008662 353 QDRSKVIVMDADGT-RSKGI-ARSLRKLGV 380 (558)
Q Consensus 353 ~kdk~IVVyC~sG~-RS~~A-A~~L~~~Gf 380 (558)
.++.+|+|+|..|. |+... +..|...|.
T Consensus 115 ~~~~~VlVHC~aG~gRSg~~va~~L~~~g~ 144 (189)
T 3rz2_A 115 EPGCCIAVHCVAGLGRAPVLVALALIEGGM 144 (189)
T ss_dssp STTCEEEEECSSSSTTHHHHHHHHHHTTTC
T ss_pred CCCCcEEEECCCCCCHHHHHHHHHHHHcCC
Confidence 46789999999996 77553 334444444
No 123
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=59.92 E-value=11 Score=35.12 Aligned_cols=27 Identities=26% Similarity=0.369 Sum_probs=19.1
Q ss_pred CCceEEEEeCCCc-hHHH--HHHHHHHccC
Q 008662 354 DRSKVIVMDADGT-RSKG--IARSLRKLGV 380 (558)
Q Consensus 354 kdk~IVVyC~sG~-RS~~--AA~~L~~~Gf 380 (558)
.+.+|+|||..|. ||.. +|..++..|.
T Consensus 116 ~g~~VLVHC~~G~sRS~tvv~ayLm~~~~~ 145 (182)
T 2j16_A 116 KREKILIHAQCGLSRSATLIIAYIMKYHNL 145 (182)
T ss_dssp TTCCEEEEESSCCSHHHHHHHHHHHHHTTC
T ss_pred cCCeEEEECCCCCChHHHHHHHHHHHHcCC
Confidence 5789999999996 7765 3444555554
No 124
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens}
Probab=58.95 E-value=26 Score=32.39 Aligned_cols=27 Identities=30% Similarity=0.292 Sum_probs=19.8
Q ss_pred CCceEEEEeCCCc-hHHH--HHHHHHHccC
Q 008662 354 DRSKVIVMDADGT-RSKG--IARSLRKLGV 380 (558)
Q Consensus 354 kdk~IVVyC~sG~-RS~~--AA~~L~~~Gf 380 (558)
.+.+|+|||..|. ||.. +++.+...|.
T Consensus 102 ~~~~VlVHC~aG~~RSgtvv~ayLm~~~~~ 131 (190)
T 2wgp_A 102 KHGATLVHCAAGVSRSATLCIAYLMKFHNV 131 (190)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHHCC
T ss_pred cCCCEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence 5789999999995 8864 3455666665
No 125
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=57.53 E-value=29 Score=31.95 Aligned_cols=27 Identities=19% Similarity=0.320 Sum_probs=19.8
Q ss_pred CCceEEEEeCCCc-hHHH--HHHHHHHccC
Q 008662 354 DRSKVIVMDADGT-RSKG--IARSLRKLGV 380 (558)
Q Consensus 354 kdk~IVVyC~sG~-RS~~--AA~~L~~~Gf 380 (558)
.+.+|+|||..|. ||.. +|..++..|.
T Consensus 96 ~~~~VLVHC~aG~sRS~~vv~ayLm~~~~~ 125 (188)
T 2esb_A 96 KQGRTLLHCAAGVSRSAALCLAYLMKYHAM 125 (188)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHSCC
T ss_pred cCCEEEEECCCCCchHHHHHHHHHHHHcCC
Confidence 5789999999995 8864 3455566665
No 126
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=55.48 E-value=24 Score=31.68 Aligned_cols=27 Identities=15% Similarity=0.295 Sum_probs=19.3
Q ss_pred CCceEEEEeCCCc-hHHH--HHHHHHHccC
Q 008662 354 DRSKVIVMDADGT-RSKG--IARSLRKLGV 380 (558)
Q Consensus 354 kdk~IVVyC~sG~-RS~~--AA~~L~~~Gf 380 (558)
.+.+|+|+|..|. ||.. +|..++..|.
T Consensus 86 ~~~~VlVHC~~G~sRS~~vv~ayLm~~~~~ 115 (161)
T 3emu_A 86 RKEGVLIISGTGVNKAPAIVIAFLMYYQRL 115 (161)
T ss_dssp TTCEEEEEESSSSSHHHHHHHHHHHHHTTC
T ss_pred cCCeEEEEcCCCCcHHHHHHHHHHHHHhCC
Confidence 4679999999997 7644 3445566665
No 127
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=53.94 E-value=23 Score=32.19 Aligned_cols=27 Identities=19% Similarity=0.217 Sum_probs=18.9
Q ss_pred CCceEEEEeCCCc-hHHHH--HHHHHHccC
Q 008662 354 DRSKVIVMDADGT-RSKGI--ARSLRKLGV 380 (558)
Q Consensus 354 kdk~IVVyC~sG~-RS~~A--A~~L~~~Gf 380 (558)
.+.+|+|||..|. ||... +..++..|.
T Consensus 86 ~~~~VlVHC~aG~~RSg~~v~ayLm~~~~~ 115 (177)
T 2oud_A 86 CGKGLLIHCQAGVSRSATIVIAYLMKHTRM 115 (177)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHTSCC
T ss_pred cCCcEEEEcCCCCCchHHHHHHHHHHHcCC
Confidence 5789999999995 88664 334444554
No 128
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A*
Probab=53.83 E-value=34 Score=31.86 Aligned_cols=24 Identities=25% Similarity=0.173 Sum_probs=17.1
Q ss_pred CCceEEEEeCCCc-hHHHH-HHHHHH
Q 008662 354 DRSKVIVMDADGT-RSKGI-ARSLRK 377 (558)
Q Consensus 354 kdk~IVVyC~sG~-RS~~A-A~~L~~ 377 (558)
.+.+|+|||..|. |+... +..|..
T Consensus 132 ~~~~VlVHC~aG~gRTg~~~a~~L~~ 157 (212)
T 1fpz_A 132 NYRKTLIHSYGGLGRSCLVAACLLLY 157 (212)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHH
Confidence 5779999999997 77554 344444
No 129
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Probab=53.46 E-value=37 Score=29.58 Aligned_cols=24 Identities=17% Similarity=0.102 Sum_probs=16.7
Q ss_pred CCceEEEEeCCCc-hHHHHH-HHHHH
Q 008662 354 DRSKVIVMDADGT-RSKGIA-RSLRK 377 (558)
Q Consensus 354 kdk~IVVyC~sG~-RS~~AA-~~L~~ 377 (558)
++.+|+|||..|. ||...+ ..|..
T Consensus 108 ~~~~vlVHC~aG~~RTg~~~a~~L~~ 133 (167)
T 3s4o_A 108 PPPTIGVHCVAGLGRAPILVALALVE 133 (167)
T ss_dssp CCCEEEEECSSSSSHHHHHHHHHHHH
T ss_pred CCCcEEEECCCCCCHHHHHHHHHHHH
Confidence 4789999999996 775543 33443
No 130
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=49.23 E-value=27 Score=34.83 Aligned_cols=45 Identities=18% Similarity=0.164 Sum_probs=33.6
Q ss_pred ceEEEEeCCCc---hHHHHHHHHHHccCCCEEEe-cc---------hHHHHHHcCCCee
Q 008662 356 SKVIVMDADGT---RSKGIARSLRKLGVMRAFLV-QG---------GFQSWVKEGLRIK 401 (558)
Q Consensus 356 k~IVVyC~sG~---RS~~AA~~L~~~Gf~nVy~L-dG---------G~~aWkaAGLPV~ 401 (558)
++|+|+|..|+ .+..+||.|...||+ |.++ -+ -++.|++.|.++.
T Consensus 80 ~~VlVlcG~GNNGGDGlv~AR~L~~~G~~-V~V~~~~~~~~~~~~~~~~~~~~~g~~~~ 137 (265)
T 2o8n_A 80 PTVLVICGPGNNGGDGLVCARHLKLFGYQ-PTIYYPKRPNKPLFTGLVTQCQKMDIPFL 137 (265)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEEECCSCCSSHHHHHHHHHHHHTTCCBC
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCc-EEEEEeCCCCCHHHHHHHHHHHHcCCcEE
Confidence 58999999876 778899999999994 5544 22 2456777777764
No 131
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Probab=49.17 E-value=62 Score=27.86 Aligned_cols=28 Identities=18% Similarity=0.167 Sum_probs=18.7
Q ss_pred CCCceEEEEeCCCc-hHHHHH-HHHHHccC
Q 008662 353 QDRSKVIVMDADGT-RSKGIA-RSLRKLGV 380 (558)
Q Consensus 353 ~kdk~IVVyC~sG~-RS~~AA-~~L~~~Gf 380 (558)
+++.+|+|||..|. ||...+ ..|...|.
T Consensus 94 ~~~~~vlVHC~aG~~Rtg~~~a~~l~~~~~ 123 (159)
T 1rxd_A 94 EPGCCIAVHCVAGLGRAPVLVALALIEGGM 123 (159)
T ss_dssp STTCEEEEECSSSSTTHHHHHHHHHHHTTC
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHHHhCC
Confidence 35689999999996 775543 34444443
No 132
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=45.54 E-value=34 Score=33.52 Aligned_cols=45 Identities=16% Similarity=0.127 Sum_probs=34.2
Q ss_pred ceEEEEeCCCc---hHHHHHHHHHHccCCCEEEe-cc----------hHHHHHHcCCCee
Q 008662 356 SKVIVMDADGT---RSKGIARSLRKLGVMRAFLV-QG----------GFQSWVKEGLRIK 401 (558)
Q Consensus 356 k~IVVyC~sG~---RS~~AA~~L~~~Gf~nVy~L-dG----------G~~aWkaAGLPV~ 401 (558)
++|+|.|..|+ .+..+||.|...||+ |.++ -+ -++.|+..|.++.
T Consensus 59 ~~v~VlcG~GNNGGDGlv~AR~L~~~G~~-V~v~~~~~~~~~~~~~~~~~~~~~~g~~~~ 117 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGDGLVCARHLKLFGYN-PVVFYPKRSERTEFYKQLVHQLNFFKVPVL 117 (246)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCC-EEEECCCCCTTCHHHHHHHHHHHHTTCCEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCe-EEEEEcCCCCCCHHHHHHHHHHHHcCCcEE
Confidence 58999999876 778999999999994 5543 22 2557777887765
No 133
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=43.15 E-value=23 Score=34.96 Aligned_cols=30 Identities=17% Similarity=0.191 Sum_probs=24.8
Q ss_pred ceEEEEeCCCc---hHHHHHHHHHHccCCCEEEe
Q 008662 356 SKVIVMDADGT---RSKGIARSLRKLGVMRAFLV 386 (558)
Q Consensus 356 k~IVVyC~sG~---RS~~AA~~L~~~Gf~nVy~L 386 (558)
++|+|+|..|+ .+..+||.|...||+ |.++
T Consensus 86 ~~vlVlcG~GNNGGDGlv~AR~L~~~G~~-V~v~ 118 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQGISCGRHLANHDVQ-VILF 118 (259)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCe-EEEE
Confidence 58999999876 778899999999995 5443
No 134
>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A
Probab=41.87 E-value=40 Score=30.39 Aligned_cols=27 Identities=30% Similarity=0.300 Sum_probs=18.3
Q ss_pred CCceEEEEeCCCc-hHHHH--HHHHHHccC
Q 008662 354 DRSKVIVMDADGT-RSKGI--ARSLRKLGV 380 (558)
Q Consensus 354 kdk~IVVyC~sG~-RS~~A--A~~L~~~Gf 380 (558)
.+.+|+|||..|. ||... +..+...|.
T Consensus 107 ~~~~VlVHC~aG~~RSg~~v~aylm~~~~~ 136 (176)
T 3cm3_A 107 RNEPVLVHSAAGVNRSGAMILAYLMSKNKE 136 (176)
T ss_dssp HTCCEEEECSSSSSHHHHHHHHHHHHHCCS
T ss_pred CCCcEEEECCcCCCHHHHHHHHHHHHHhCC
Confidence 3679999999995 77553 334444455
No 135
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=40.85 E-value=26 Score=38.00 Aligned_cols=48 Identities=15% Similarity=0.167 Sum_probs=36.3
Q ss_pred CCceEEEEeCCCc---hHHHHHHHHHHccCC-CEEEecc--------hHHHHHHcCCCee
Q 008662 354 DRSKVIVMDADGT---RSKGIARSLRKLGVM-RAFLVQG--------GFQSWVKEGLRIK 401 (558)
Q Consensus 354 kdk~IVVyC~sG~---RS~~AA~~L~~~Gf~-nVy~LdG--------G~~aWkaAGLPV~ 401 (558)
+.++|+|+|..|+ .+..+||.|...||+ .|+.+.. -++.|++.|.++.
T Consensus 51 ~~~~v~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~g~~~~ 110 (502)
T 3rss_A 51 SDYRFLVLCGGGNNGGDGFVVARNLLGVVKDVLVVFLGKKKTPDCEYNYGLYKKFGGKVV 110 (502)
T ss_dssp TTCEEEEEECSSHHHHHHHHHHHHHTTTSSEEEEEECCSSCCHHHHHHHHHHHHTTCCEE
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEECCCCCHHHHHHHHHHHhCCCcee
Confidence 4678999999876 778899999999994 3333322 1568899998876
No 136
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=39.79 E-value=27 Score=35.37 Aligned_cols=45 Identities=13% Similarity=0.111 Sum_probs=32.2
Q ss_pred ceEEEEeCCCc---hHHHHHHHHHHccCCCEEEe-cc----------hHHHHHHcCCCee
Q 008662 356 SKVIVMDADGT---RSKGIARSLRKLGVMRAFLV-QG----------GFQSWVKEGLRIK 401 (558)
Q Consensus 356 k~IVVyC~sG~---RS~~AA~~L~~~Gf~nVy~L-dG----------G~~aWkaAGLPV~ 401 (558)
.+|+|+|..|+ .+..+||.|...||+ |.++ -+ -+..|+..|.++.
T Consensus 133 ~~vlVlcG~GNNGGDGlv~AR~L~~~G~~-V~V~~~~~~~~~~~a~~~~~~~~~~g~~~~ 191 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQGISCGRHLANHDVQ-VILFLPNFVKMLESITNELSLFSKTQGQQV 191 (306)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEEECCCCSSCCHHHHHHHHHHHTSSCEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCc-EEEEEecCCCCCHHHHHHHHHHHHcCCccc
Confidence 58999999876 778999999999994 5443 21 1345666666553
No 137
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=38.48 E-value=60 Score=29.63 Aligned_cols=80 Identities=16% Similarity=0.208 Sum_probs=44.0
Q ss_pred CCceEEEEeCCCc----hHHHHHHHHHHccCCCEEEecchHHHHHHcCCCeeccCccchhhhhhhhHHHHHhhhcCccch
Q 008662 354 DRSKVIVMDADGT----RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKSETALTILNEDAEAILEDINSSPVQ 429 (558)
Q Consensus 354 kdk~IVVyC~sG~----RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaAGLPV~~~~~~~~lel~~e~~~~I~~qV~~~~l~ 429 (558)
.+.+.||++.... .-...+..|.+.|| +|+.++= ...|..-.........+.+.++..++++.+...++.
T Consensus 44 ~~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~-~v~~~d~-----~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (315)
T 4f0j_A 44 ANGRTILLMHGKNFCAGTWERTIDVLADAGY-RVIAVDQ-----VGFCKSSKPAHYQYSFQQLAANTHALLERLGVARAS 117 (315)
T ss_dssp CCSCEEEEECCTTCCGGGGHHHHHHHHHTTC-EEEEECC-----TTSTTSCCCSSCCCCHHHHHHHHHHHHHHTTCSCEE
T ss_pred CCCCeEEEEcCCCCcchHHHHHHHHHHHCCC-eEEEeec-----CCCCCCCCCCccccCHHHHHHHHHHHHHHhCCCceE
Confidence 3455666665422 22345667888899 5776651 112221111111233444456667777777777788
Q ss_pred hhhhhchhhh
Q 008662 430 FLGFGVGCFA 439 (558)
Q Consensus 430 llG~~~G~~~ 439 (558)
++|+-.|...
T Consensus 118 l~G~S~Gg~~ 127 (315)
T 4f0j_A 118 VIGHSMGGML 127 (315)
T ss_dssp EEEETHHHHH
T ss_pred EEEecHHHHH
Confidence 8888877443
No 138
>2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR}
Probab=35.92 E-value=70 Score=29.50 Aligned_cols=19 Identities=32% Similarity=0.377 Sum_probs=14.9
Q ss_pred CCceEEEEeCCCc-hHHHHH
Q 008662 354 DRSKVIVMDADGT-RSKGIA 372 (558)
Q Consensus 354 kdk~IVVyC~sG~-RS~~AA 372 (558)
.+.+|+|+|..|. ||...+
T Consensus 124 ~~~~VlVHC~aG~~RSg~~v 143 (195)
T 2q05_A 124 RNEPVLVHCAAGVNRSGAMI 143 (195)
T ss_dssp TTCCEEEECSSSSSHHHHHH
T ss_pred cCCcEEEEcCCCCChHHHHH
Confidence 4679999999995 776544
No 139
>2jgn_A DBX, DDX3, ATP-dependent RNA helicase DDX3X; phosphorylation, nucleotide-binding, hydrolase, RNA-binding, ATP-binding, DNA-binding, nuclear protein; 1.91A {Homo sapiens}
Probab=35.13 E-value=32 Score=31.37 Aligned_cols=38 Identities=13% Similarity=0.116 Sum_probs=29.3
Q ss_pred CCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHH
Q 008662 353 QDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQ 391 (558)
Q Consensus 353 ~kdk~IVVyC~sG~RS~~AA~~L~~~Gf~nVy~LdGG~~ 391 (558)
.++.+++|+|++-..+...+..|+..|+ .+..+.|++.
T Consensus 44 ~~~~k~lVF~~~~~~~~~l~~~L~~~g~-~~~~lhg~~~ 81 (185)
T 2jgn_A 44 GKDSLTLVFVETKKGADSLEDFLYHEGY-ACTSIHGDRS 81 (185)
T ss_dssp -CCSCEEEEESCHHHHHHHHHHHHHTTC-CEEEEC----
T ss_pred CCCCeEEEEECCHHHHHHHHHHHHHcCC-ceEEEeCCCC
Confidence 3567899999998888999999999998 6888888864
No 140
>4fak_A Ribosomal RNA large subunit methyltransferase H; alpha/beta methyltransferase rossmann fold, rRNA methylation rRNA, ribosomal protein; HET: SAM PG4; 1.70A {Staphylococcus aureus} PDB: 1vh0_A
Probab=31.64 E-value=55 Score=30.42 Aligned_cols=79 Identities=20% Similarity=0.262 Sum_probs=50.8
Q ss_pred HHHHhhhcccCCCceEEEEeCCCc--hHHHHHHHHHH---ccCCCEEEecchHH----HH-HHcCCCeeccCccchhhhh
Q 008662 343 AAVIRNLKIVQDRSKVIVMDADGT--RSKGIARSLRK---LGVMRAFLVQGGFQ----SW-VKEGLRIKELKSETALTIL 412 (558)
Q Consensus 343 aaGI~~Lk~~~kdk~IVVyC~sG~--RS~~AA~~L~~---~Gf~nVy~LdGG~~----aW-kaAGLPV~~~~~~~~lel~ 412 (558)
+-|-..++.++++..+|+.|-.|. .|...|..|.. .|..++..+-||-. +. +.+...+.-.+-..|-.++
T Consensus 62 ~Eg~~il~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~g~~~i~FvIGG~~Gl~~~v~~rA~~~lSlS~mTfpHqL~ 141 (163)
T 4fak_A 62 KEGQRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSNGLHKDVLQRSNYALSFSKMTFPHQMM 141 (163)
T ss_dssp HHHHHHHHTCCTTSEEEEEEEEEEECCHHHHHHHHHHHHHTTCCEEEEEECBTTBCCHHHHHHCSEEEESCSSCCCHHHH
T ss_pred HHHHHHHHhCCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCcceEEEEECCCccCHHHHHhcCceEEEecCCCCHHHH
Confidence 334333556678888999998886 88888888765 57778999999854 22 3355555444444566655
Q ss_pred h-hhHHHHHh
Q 008662 413 N-EDAEAILE 421 (558)
Q Consensus 413 ~-e~~~~I~~ 421 (558)
+ -.+|||-|
T Consensus 142 RliL~EQlYR 151 (163)
T 4fak_A 142 RVVLIEQVYR 151 (163)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5 33445544
No 141
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=31.03 E-value=23 Score=35.80 Aligned_cols=61 Identities=8% Similarity=-0.092 Sum_probs=41.3
Q ss_pred hhhhhhhHHHhhHhhhhhhhhhHhhhHHHHHHHhhccccccccccccccccc---eeccccchhhh
Q 008662 92 SMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSK---LTNFSTDLKEA 154 (558)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~a~~~~r~~~d~~~~g~~~~~~~~~~~~~~~---~t~astgl~e~ 154 (558)
.|+-++++..- -......+..|.+|||.+|+|+.| ....|++.......+ ...+++|++|.
T Consensus 262 ~IyA~GD~a~~-~~~~~~~~~~A~~qg~~aa~~i~g-~~~~~~~~~~~~~~~~~~~~~~~vG~~~~ 325 (367)
T 1xhc_A 262 DVYAIGDCAEY-SGIIAGTAKAAMEQARVLADILKG-EPRRYNFKFRSTVFKFGKLQIAIIGNTKG 325 (367)
T ss_dssp TEEECGGGEEB-TTBCCCSHHHHHHHHHHHHHHHTT-CCCCCCSSCCEEEEEETTEEEEEEECCSS
T ss_pred CEEEeEeeeec-CCCCccHHHHHHHHHHHHHHHhcC-CCccCCCCCCceEEEECCceEEEECCCCC
Confidence 35556665421 011123567899999999999994 666788766554333 67889999998
No 142
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=29.81 E-value=90 Score=31.05 Aligned_cols=26 Identities=15% Similarity=0.142 Sum_probs=17.8
Q ss_pred CceEEEEeCCCc-hHHH-HHHHH-HHccC
Q 008662 355 RSKVIVMDADGT-RSKG-IARSL-RKLGV 380 (558)
Q Consensus 355 dk~IVVyC~sG~-RS~~-AA~~L-~~~Gf 380 (558)
+.+|+|||..|. ||.. ++..| ...|.
T Consensus 106 g~~VLVHC~aG~sRS~tvv~ayLm~~~g~ 134 (294)
T 3nme_A 106 GGVTYVHSTAGMGRAPAVALTYMFWVQGY 134 (294)
T ss_dssp CSEEEEECSSSSSHHHHHHHHHHHHTSCC
T ss_pred CCEEEEECCCCCchhHHHHHHHHHHHhCC
Confidence 678999999997 7654 33334 44565
No 143
>3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis}
Probab=29.63 E-value=95 Score=27.59 Aligned_cols=74 Identities=15% Similarity=0.160 Sum_probs=41.4
Q ss_pred ceEEEEeCCCc------hHHHHHHHHHHccCCCEEEecchHHHHHHcCCCeeccCccchhhhhhhhHHHHHhhhcCccch
Q 008662 356 SKVIVMDADGT------RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKSETALTILNEDAEAILEDINSSPVQ 429 (558)
Q Consensus 356 k~IVVyC~sG~------RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaAGLPV~~~~~~~~lel~~e~~~~I~~qV~~~~l~ 429 (558)
++.||++.... +....+..|.+.|| +|+.++- .+ .|..-.. ......+-+-++..++++.+...++.
T Consensus 37 ~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~-~v~~~d~--~G---~G~s~~~-~~~~~~~~~~~d~~~~~~~l~~~~~~ 109 (270)
T 3llc_A 37 RPTCIWLGGYRSDMTGTKALEMDDLAASLGV-GAIRFDY--SG---HGASGGA-FRDGTISRWLEEALAVLDHFKPEKAI 109 (270)
T ss_dssp SCEEEEECCTTCCTTSHHHHHHHHHHHHHTC-EEEEECC--TT---STTCCSC-GGGCCHHHHHHHHHHHHHHHCCSEEE
T ss_pred CCeEEEECCCccccccchHHHHHHHHHhCCC-cEEEecc--cc---CCCCCCc-cccccHHHHHHHHHHHHHHhccCCeE
Confidence 56666665432 12336677878899 5776641 11 1221111 11123333345666777777777888
Q ss_pred hhhhhch
Q 008662 430 FLGFGVG 436 (558)
Q Consensus 430 llG~~~G 436 (558)
++|+-.|
T Consensus 110 l~G~S~G 116 (270)
T 3llc_A 110 LVGSSMG 116 (270)
T ss_dssp EEEETHH
T ss_pred EEEeChH
Confidence 8888877
No 144
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=29.47 E-value=30 Score=35.38 Aligned_cols=60 Identities=13% Similarity=-0.066 Sum_probs=42.5
Q ss_pred hhhhhhHHHhhHhhhhhhhhhHhhhHHHHHHHhhccccccccccccccccc---eeccccchhhh
Q 008662 93 MIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSK---LTNFSTDLKEA 154 (558)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~a~~~~r~~~d~~~~g~~~~~~~~~~~~~~~---~t~astgl~e~ 154 (558)
|+-++++..- .+.....+..|.+|||.+|.+++ |....|++.......+ +..++.|++|.
T Consensus 260 IyA~GD~a~~-~~~~~~~~~~A~~qg~~aa~~i~-g~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 322 (385)
T 3klj_A 260 IYACGDVAEF-YGKNPGLINIANKQGEVAGLNAC-GEDASYSEIIPSPILKVSGISIISCGDIEN 322 (385)
T ss_dssp EEECGGGEEE-TTBCCCCHHHHHHHHHHHHHHHT-TCCCCCCCCCCCCEEEETTEEEEEESCCTT
T ss_pred EEEEEeeEec-CCCcccHHHHHHHHHHHHHHHhc-CCCcCCCCCCCcEEEEeCCCcEEEEcCCCC
Confidence 4445554321 11223467889999999999999 4777788877766665 67889999886
No 145
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=28.49 E-value=97 Score=27.64 Aligned_cols=79 Identities=11% Similarity=0.092 Sum_probs=42.1
Q ss_pred CCceEEEEeCCCc----hHHHHHHHHHHccCCCEEEecchHHHHHHcCCCeeccCccchhhhhhhhHHHHHhhh-cCccc
Q 008662 354 DRSKVIVMDADGT----RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKSETALTILNEDAEAILEDI-NSSPV 428 (558)
Q Consensus 354 kdk~IVVyC~sG~----RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaAGLPV~~~~~~~~lel~~e~~~~I~~qV-~~~~l 428 (558)
.+++.||++.... .-...+..|.+.|| +|+.++= .+ .|..-.........+.+-++..++++.+ ...++
T Consensus 10 ~~~~~vvllHG~~~~~~~~~~~~~~l~~~g~-~v~~~D~--~G---~G~S~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ 83 (267)
T 3sty_A 10 FVKKHFVLVHAAFHGAWCWYKIVALMRSSGH-NVTALDL--GA---SGINPKQALQIPNFSDYLSPLMEFMASLPANEKI 83 (267)
T ss_dssp CCCCEEEEECCTTCCGGGGHHHHHHHHHTTC-EEEEECC--TT---STTCSCCGGGCCSHHHHHHHHHHHHHTSCTTSCE
T ss_pred CCCCeEEEECCCCCCcchHHHHHHHHHhcCC-eEEEecc--cc---CCCCCCcCCccCCHHHHHHHHHHHHHhcCCCCCE
Confidence 4456666665432 12345667778899 5777651 11 1221111111123344445566667776 35678
Q ss_pred hhhhhhchhh
Q 008662 429 QFLGFGVGCF 438 (558)
Q Consensus 429 ~llG~~~G~~ 438 (558)
.++|+-.|..
T Consensus 84 ~lvGhS~Gg~ 93 (267)
T 3sty_A 84 ILVGHALGGL 93 (267)
T ss_dssp EEEEETTHHH
T ss_pred EEEEEcHHHH
Confidence 8888888833
No 146
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=28.28 E-value=49 Score=29.21 Aligned_cols=27 Identities=30% Similarity=0.393 Sum_probs=18.9
Q ss_pred CCceEEEEeCCCc-hHHHH--HHHHHHccC
Q 008662 354 DRSKVIVMDADGT-RSKGI--ARSLRKLGV 380 (558)
Q Consensus 354 kdk~IVVyC~sG~-RS~~A--A~~L~~~Gf 380 (558)
.+.+|+|+|..|. ||... +..++..|.
T Consensus 84 ~~~~VlVHC~~G~~RS~~vv~ayLm~~~~~ 113 (155)
T 2hxp_A 84 QNCGVLVHSLAGVSRSVTVTVAYLMQKLHL 113 (155)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHHHTC
T ss_pred cCCcEEEECCCCCchhHHHHHHHHHHHcCC
Confidence 5789999999994 88643 334455554
No 147
>2hjv_A ATP-dependent RNA helicase DBPA; parallel alpha-beta, hydrolase; 1.95A {Bacillus subtilis}
Probab=27.16 E-value=46 Score=29.32 Aligned_cols=36 Identities=17% Similarity=0.317 Sum_probs=30.7
Q ss_pred CCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchH
Q 008662 354 DRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGF 390 (558)
Q Consensus 354 kdk~IVVyC~sG~RS~~AA~~L~~~Gf~nVy~LdGG~ 390 (558)
+..+++|+|++-..+...+..|...|+ .+..+.|++
T Consensus 34 ~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~~hg~~ 69 (163)
T 2hjv_A 34 NPDSCIIFCRTKEHVNQLTDELDDLGY-PCDKIHGGM 69 (163)
T ss_dssp CCSSEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTS
T ss_pred CCCcEEEEECCHHHHHHHHHHHHHcCC-cEEEEeCCC
Confidence 456899999998899999999999999 588888875
No 148
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A
Probab=26.90 E-value=1.2e+02 Score=31.08 Aligned_cols=28 Identities=14% Similarity=0.205 Sum_probs=18.4
Q ss_pred CCCceEEEEeCCCc-hHHHHH-HHHHH-ccC
Q 008662 353 QDRSKVIVMDADGT-RSKGIA-RSLRK-LGV 380 (558)
Q Consensus 353 ~kdk~IVVyC~sG~-RS~~AA-~~L~~-~Gf 380 (558)
..+.+|+|||..|. ||...+ ..|.. .|.
T Consensus 267 ~~~~~VLVHC~aG~gRTGtvvaayLm~~~g~ 297 (348)
T 1ohe_A 267 NAEGAIAVHSKAGLGRTGTLIACYIMKHYRM 297 (348)
T ss_dssp SCSSEEEEECSSSSHHHHHHHHHHHHHHHCC
T ss_pred hCCCcEEEECCCCCChHHHHHHHHHHHHcCC
Confidence 45789999999995 775533 33333 554
No 149
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=26.88 E-value=1.2e+02 Score=26.96 Aligned_cols=78 Identities=12% Similarity=0.162 Sum_probs=42.3
Q ss_pred CceEEEEeCCCc----hHHHHHHHHHHccCCCEEEecchHHHHHHcCCCeecc-CccchhhhhhhhHHHHHhhhcCccch
Q 008662 355 RSKVIVMDADGT----RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKEL-KSETALTILNEDAEAILEDINSSPVQ 429 (558)
Q Consensus 355 dk~IVVyC~sG~----RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaAGLPV~~~-~~~~~lel~~e~~~~I~~qV~~~~l~ 429 (558)
+.+.||++.... .-...+..|...|| +|+.++- ...|..-... ......+.+.++..++++.+...++.
T Consensus 25 ~~~~vv~~hG~~~~~~~~~~~~~~l~~~G~-~v~~~d~-----~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (286)
T 3qit_A 25 EHPVVLCIHGILEQGLAWQEVALPLAAQGY-RVVAPDL-----FGHGRSSHLEMVTSYSSLTFLAQIDRVIQELPDQPLL 98 (286)
T ss_dssp TSCEEEEECCTTCCGGGGHHHHHHHHHTTC-EEEEECC-----TTSTTSCCCSSGGGCSHHHHHHHHHHHHHHSCSSCEE
T ss_pred CCCEEEEECCCCcccchHHHHHHHhhhcCe-EEEEECC-----CCCCCCCCCCCCCCcCHHHHHHHHHHHHHhcCCCCEE
Confidence 445666665422 22345667888899 5776652 1112211111 01123334456666777777767788
Q ss_pred hhhhhchhh
Q 008662 430 FLGFGVGCF 438 (558)
Q Consensus 430 llG~~~G~~ 438 (558)
++|+-.|..
T Consensus 99 l~G~S~Gg~ 107 (286)
T 3qit_A 99 LVGHSMGAM 107 (286)
T ss_dssp EEEETHHHH
T ss_pred EEEeCHHHH
Confidence 888887743
No 150
>2rb4_A ATP-dependent RNA helicase DDX25; rossmann fold, structural genomics, structural consortium, SGC, alternative initiation, ATP-binding, devel protein; 2.80A {Homo sapiens}
Probab=25.11 E-value=47 Score=29.53 Aligned_cols=36 Identities=14% Similarity=0.196 Sum_probs=30.7
Q ss_pred CCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchH
Q 008662 354 DRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGF 390 (558)
Q Consensus 354 kdk~IVVyC~sG~RS~~AA~~L~~~Gf~nVy~LdGG~ 390 (558)
+..+++|+|++-..+...+..|...|+ .+..+.|++
T Consensus 33 ~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~~~g~~ 68 (175)
T 2rb4_A 33 TIGQAIIFCQTRRNAKWLTVEMIQDGH-QVSLLSGEL 68 (175)
T ss_dssp CCSEEEEECSCHHHHHHHHHHHHTTTC-CEEEECSSC
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHcCC-cEEEEeCCC
Confidence 456899999998888999999999998 588888874
No 151
>4h3k_B RNA polymerase II subunit A C-terminal domain PHO SSU72; heat repeat, phosphatase, RNA polymerase II, hydrolase; HET: SEP; 2.00A {Homo sapiens} PDB: 3o2q_B* 4h3h_B* 3o2s_B
Probab=24.91 E-value=69 Score=31.19 Aligned_cols=32 Identities=22% Similarity=0.173 Sum_probs=26.9
Q ss_pred ceEEEEeCCCc-hHHHHHHHHHHccCCCEEEecc
Q 008662 356 SKVIVMDADGT-RSKGIARSLRKLGVMRAFLVQG 388 (558)
Q Consensus 356 k~IVVyC~sG~-RS~~AA~~L~~~Gf~nVy~LdG 388 (558)
-++-++|.+.+ ||..|-..|++.|| +|..+--
T Consensus 26 Lr~avVCaSN~NRSMEAH~~L~k~Gf-~V~SfGT 58 (214)
T 4h3k_B 26 LRVAVVSSSNQNRSMEAHNILSKRGF-SVRSFGT 58 (214)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHTTC-EEEEEEC
T ss_pred CeEEEECCCCcchhHHHHHHHHHCCC-ceEeecC
Confidence 35889999976 99999999999999 6876643
No 152
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=24.87 E-value=55 Score=27.99 Aligned_cols=28 Identities=18% Similarity=0.164 Sum_probs=18.8
Q ss_pred CCceEEEEeCCCch-HHHHHHH----HHHccCC
Q 008662 354 DRSKVIVMDADGTR-SKGIARS----LRKLGVM 381 (558)
Q Consensus 354 kdk~IVVyC~sG~R-S~~AA~~----L~~~Gf~ 381 (558)
+-.+|++.|.+|+. |..++.. +.+.|++
T Consensus 20 ~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~ 52 (113)
T 1tvm_A 20 SKRKIIVACGGAVATSTMAAEEIKELCQSHNIP 52 (113)
T ss_dssp SSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCC
T ss_pred cccEEEEECCCCHHHHHHHHHHHHHHHHHcCCe
Confidence 34579999999984 4445554 4556664
No 153
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Probab=24.14 E-value=59 Score=30.81 Aligned_cols=28 Identities=29% Similarity=0.325 Sum_probs=19.6
Q ss_pred CCCceEEEEeCCCc-hHHH--HHHHHHHccC
Q 008662 353 QDRSKVIVMDADGT-RSKG--IARSLRKLGV 380 (558)
Q Consensus 353 ~kdk~IVVyC~sG~-RS~~--AA~~L~~~Gf 380 (558)
..+.+|+|||..|. ||.. +|+.+...|.
T Consensus 137 ~~~~~VLVHC~aG~sRS~tvv~aYLm~~~~~ 167 (219)
T 2y96_A 137 DDHSKILVHCVMGRSRSATLVLAYLMIHKDM 167 (219)
T ss_dssp STTCCEEEECSSSSSHHHHHHHHHHHHHSCC
T ss_pred ccCCeEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence 35679999999995 8765 3344555565
No 154
>1t5i_A C_terminal domain of A probable ATP-dependent RNA helicase; RECA-like fold, PRE-mRNA processing protein; 1.90A {Homo sapiens} SCOP: c.37.1.19
Probab=24.11 E-value=56 Score=29.23 Aligned_cols=36 Identities=17% Similarity=0.277 Sum_probs=30.8
Q ss_pred CCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchH
Q 008662 354 DRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGF 390 (558)
Q Consensus 354 kdk~IVVyC~sG~RS~~AA~~L~~~Gf~nVy~LdGG~ 390 (558)
+..+++|+|++-..+...+..|...|+ ++..+.|++
T Consensus 30 ~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~~hg~~ 65 (172)
T 1t5i_A 30 EFNQVVIFVKSVQRCIALAQLLVEQNF-PAIAIHRGM 65 (172)
T ss_dssp CCSSEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTS
T ss_pred CCCcEEEEECCHHHHHHHHHHHHhcCC-CEEEEECCC
Confidence 456899999998899999999999999 588888874
No 155
>2gi4_A Possible phosphotyrosine protein phosphatase; low molecular weight, protein tyrosine phosphatase, bacterial phosphatase; NMR {Campylobacter jejuni}
Probab=23.71 E-value=33 Score=31.14 Aligned_cols=37 Identities=16% Similarity=0.196 Sum_probs=27.8
Q ss_pred eEEEEeCCCc-hHHHHHHHHHHc----cCC-CEEEecchHHHH
Q 008662 357 KVIVMDADGT-RSKGIARSLRKL----GVM-RAFLVQGGFQSW 393 (558)
Q Consensus 357 ~IVVyC~sG~-RS~~AA~~L~~~----Gf~-nVy~LdGG~~aW 393 (558)
+|+|+|.... ||..|..+|+.+ |.. ++.+...|..+|
T Consensus 3 ~VLFVC~gNicRSpmAEai~~~~~~~~gl~~~~~v~SAGt~~~ 45 (156)
T 2gi4_A 3 KILFICLGNICRSPMAEFIMKDLVKKANLEKEFFINSAGTSGE 45 (156)
T ss_dssp EEEEECSSCSSHHHHHHHHHHHHHHHHTTTTTCEEEEEBSSCS
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHhCCCCCcEEEEeeecCCc
Confidence 6999998765 999888877654 443 577777888776
No 156
>1fuk_A Eukaryotic initiation factor 4A; helicase, DEAD-box protein, translation; 1.75A {Saccharomyces cerevisiae} SCOP: c.37.1.19
Probab=23.10 E-value=65 Score=28.32 Aligned_cols=36 Identities=6% Similarity=0.135 Sum_probs=30.5
Q ss_pred CCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchH
Q 008662 354 DRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGF 390 (558)
Q Consensus 354 kdk~IVVyC~sG~RS~~AA~~L~~~Gf~nVy~LdGG~ 390 (558)
+..+++|+|++-..+...+..|+..|+ .+..+.|++
T Consensus 29 ~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~~~~~~ 64 (165)
T 1fuk_A 29 SVTQAVIFCNTRRKVEELTTKLRNDKF-TVSAIYSDL 64 (165)
T ss_dssp TCSCEEEEESSHHHHHHHHHHHHHTTC-CEEEECTTS
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHcCC-CEEEEECCC
Confidence 456899999998889999999999998 588888864
No 157
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B
Probab=22.88 E-value=86 Score=27.51 Aligned_cols=37 Identities=8% Similarity=0.003 Sum_probs=29.0
Q ss_pred ceEEEEeCCCc-hHHHHHHHHHHccCCCEEEecchHHH
Q 008662 356 SKVIVMDADGT-RSKGIARSLRKLGVMRAFLVQGGFQS 392 (558)
Q Consensus 356 k~IVVyC~sG~-RS~~AA~~L~~~Gf~nVy~LdGG~~a 392 (558)
+.|+|+|.... ||..|..+|+.+.-.++.+...|...
T Consensus 4 ~~VLFVC~gN~cRSpmAEai~~~~~~~~~~v~SAGt~~ 41 (139)
T 1jl3_A 4 KIIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGIEA 41 (139)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHSCTTEEEEEEESSC
T ss_pred CeEEEEcCCchHHHHHHHHHHHHhCCCCEEEEcCcCCC
Confidence 47999998765 99999999988765567777777653
No 158
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=22.80 E-value=1.2e+02 Score=26.47 Aligned_cols=43 Identities=19% Similarity=0.265 Sum_probs=34.0
Q ss_pred CCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHH
Q 008662 353 QDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVK 395 (558)
Q Consensus 353 ~kdk~IVVyC~sG~RS~~AA~~L~~~Gf~nVy~LdGG~~aWka 395 (558)
+++-+|.+++.+-.........|+..||..|..-..|.++|..
T Consensus 10 ~k~~rILiVDD~~~~r~~l~~~L~~~G~~~v~~a~~g~~al~~ 52 (134)
T 3to5_A 10 NKNMKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALPM 52 (134)
T ss_dssp CTTCCEEEECSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHH
T ss_pred CCCCEEEEEeCCHHHHHHHHHHHHHcCCcEEEEECCHHHHHHH
Confidence 4566788888876666678889999999878878888888765
No 159
>1u2p_A Ptpase, low molecular weight protein-tyrosine- phosphatase; hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 1u2q_A
Probab=22.76 E-value=44 Score=30.33 Aligned_cols=38 Identities=16% Similarity=0.244 Sum_probs=29.1
Q ss_pred ceEEEEeCCCc-hHHHHHHHHHHc----cC-CCEEEecchHHHH
Q 008662 356 SKVIVMDADGT-RSKGIARSLRKL----GV-MRAFLVQGGFQSW 393 (558)
Q Consensus 356 k~IVVyC~sG~-RS~~AA~~L~~~----Gf-~nVy~LdGG~~aW 393 (558)
.+|+|+|.... ||..|..+|+.+ |. .++.+...|..+|
T Consensus 5 ~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~ 48 (163)
T 1u2p_A 5 LHVTFVCTGNICRSPMAEKMFAQQLRHRGLGDAVRVTSAGTGNW 48 (163)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCT
T ss_pred CEEEEEcCCcHhHHHHHHHHHHHHHHHCCCCCcEEEEecccCCC
Confidence 57999998765 999988887665 44 3577778888776
No 160
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=22.56 E-value=98 Score=27.80 Aligned_cols=33 Identities=21% Similarity=0.273 Sum_probs=20.1
Q ss_pred CCceEEEEeCCCc----hHHHHHHHHHHccCCCEEEec
Q 008662 354 DRSKVIVMDADGT----RSKGIARSLRKLGVMRAFLVQ 387 (558)
Q Consensus 354 kdk~IVVyC~sG~----RS~~AA~~L~~~Gf~nVy~Ld 387 (558)
+.+++||++.... .-...+..|...|| +|+.++
T Consensus 40 ~~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~-~v~~~d 76 (303)
T 3pe6_A 40 TPKALIFVSHGAGEHSGRYEELARMLMGLDL-LVFAHD 76 (303)
T ss_dssp CCSEEEEEECCTTCCGGGGHHHHHHHHHTTE-EEEEEC
T ss_pred CCCeEEEEECCCCchhhHHHHHHHHHHhCCC-cEEEeC
Confidence 3467777766532 22345667777898 577665
No 161
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=22.43 E-value=35 Score=31.03 Aligned_cols=41 Identities=24% Similarity=0.304 Sum_probs=30.9
Q ss_pred CCceEEEEeCCCc-hHHHHHHHHHHc----cC-CCEEEecchHHHHH
Q 008662 354 DRSKVIVMDADGT-RSKGIARSLRKL----GV-MRAFLVQGGFQSWV 394 (558)
Q Consensus 354 kdk~IVVyC~sG~-RS~~AA~~L~~~----Gf-~nVy~LdGG~~aWk 394 (558)
+..+|+|+|.... ||..|..+|+.+ |. .++.+...|...|.
T Consensus 3 ~~~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~~ 49 (161)
T 2cwd_A 3 RPVRVLFVCLGNICRSPMAEGIFRKLLKERGLEDRFEVDSAGTGAWH 49 (161)
T ss_dssp CCEEEEEEESSSSSHHHHHHHHHHHHHHHHTCTTTEEEEEEESSCTT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHHHHHHcCCCCcEEEEecccCCCc
Confidence 3458999998765 999988887654 55 46778888888773
No 162
>3rof_A Low molecular weight protein-tyrosine-phosphatase; phosphatase, hydrolase; 1.03A {Staphylococcus aureus}
Probab=22.38 E-value=46 Score=30.46 Aligned_cols=38 Identities=18% Similarity=0.197 Sum_probs=29.0
Q ss_pred ceEEEEeCCCc-hHHHHHHHHHHc----cCCCEEEecchHHHH
Q 008662 356 SKVIVMDADGT-RSKGIARSLRKL----GVMRAFLVQGGFQSW 393 (558)
Q Consensus 356 k~IVVyC~sG~-RS~~AA~~L~~~----Gf~nVy~LdGG~~aW 393 (558)
.+|+|+|.... ||..|..+|+.+ |..++.+...|...|
T Consensus 7 ~~vLFVC~gN~cRSpmAE~i~~~~~~~~gl~~~~v~SAGt~~~ 49 (158)
T 3rof_A 7 VDVAFVCLGNICRSPMAEAIMRQRLKDRNIHDIKVHSRGTGSW 49 (158)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCCSEEEEEEETTCC
T ss_pred CEEEEEeCCchhHHHHHHHHHHHHHHHcCCCCeEEEecccCCc
Confidence 47999998765 999888877654 555577778888776
No 163
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Probab=21.64 E-value=69 Score=29.81 Aligned_cols=27 Identities=26% Similarity=0.221 Sum_probs=19.4
Q ss_pred CCceEEEEeCCCc-hHHHH--HHHHHHccC
Q 008662 354 DRSKVIVMDADGT-RSKGI--ARSLRKLGV 380 (558)
Q Consensus 354 kdk~IVVyC~sG~-RS~~A--A~~L~~~Gf 380 (558)
.+.+|+|+|..|. ||... ++.+...|.
T Consensus 130 ~~~~VLVHC~aG~sRS~tvv~aYLm~~~~~ 159 (205)
T 2pq5_A 130 PQGRVLVHCAMGVSRSATLVLAFLMIYENM 159 (205)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHSCC
T ss_pred CCCeEEEECCCCCcHHHHHHHHHHHHHcCC
Confidence 5679999999995 87643 345555665
No 164
>2pfu_A Biopolymer transport EXBD protein; TONB system, proton motive force, periplasmic domain; NMR {Escherichia coli}
Probab=21.13 E-value=1.2e+02 Score=24.43 Aligned_cols=34 Identities=12% Similarity=0.231 Sum_probs=24.3
Q ss_pred CCCceEEEEeCCCchHHH---HHHHHHHccCCCEEEe
Q 008662 353 QDRSKVIVMDADGTRSKG---IARSLRKLGVMRAFLV 386 (558)
Q Consensus 353 ~kdk~IVVyC~sG~RS~~---AA~~L~~~Gf~nVy~L 386 (558)
+++.+|++.+.....-.. +...|+..|+.++.+.
T Consensus 55 ~~~~~V~I~aD~~~~y~~vv~vmd~l~~aG~~~v~l~ 91 (99)
T 2pfu_A 55 KKDTTIFFRADKTVDYETLMKVMDTLHQAGYLKIGLV 91 (99)
T ss_dssp CCSSCEEEEECTTCCHHHHHHHHHHHHHTCCCCEECT
T ss_pred CCCceEEEEcCCCCCHHHHHHHHHHHHHcCCCeEEEE
Confidence 456789999887764444 4456788999888653
No 165
>2l17_A Synarsc, arsenate reductase; alpha/beta sandwich, oxidoreductase; NMR {Synechocystis} PDB: 2l18_A 2l19_A
Probab=20.81 E-value=93 Score=27.26 Aligned_cols=36 Identities=19% Similarity=0.260 Sum_probs=28.6
Q ss_pred ceEEEEeCCCc-hHHHHHHHHHHccCCCEEEecchHH
Q 008662 356 SKVIVMDADGT-RSKGIARSLRKLGVMRAFLVQGGFQ 391 (558)
Q Consensus 356 k~IVVyC~sG~-RS~~AA~~L~~~Gf~nVy~LdGG~~ 391 (558)
++|+|+|.... ||..|..+|+.+.-+++.+...|..
T Consensus 5 ~~VLFVC~gN~cRSpmAEa~~~~~~~~~~~v~SAGt~ 41 (134)
T 2l17_A 5 KKVMFVCKRNSCRSQMAEGFAKTLGAGKIAVTSCGLE 41 (134)
T ss_dssp EEEEEECCSSTHHHHHHHHHHHHHSBTTEEEEEECCT
T ss_pred CEEEEEeCCchHHHHHHHHHHHHHcCCCEEEEcccCC
Confidence 36999998765 9999999999877556777777665
No 166
>3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis}
Probab=20.21 E-value=1.1e+02 Score=29.07 Aligned_cols=76 Identities=16% Similarity=0.240 Sum_probs=40.2
Q ss_pred eEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcCCCeeccCccchhhhhhhhHHHHHhhhcCccchhhhhhch
Q 008662 357 KVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKSETALTILNEDAEAILEDINSSPVQFLGFGVG 436 (558)
Q Consensus 357 ~IVVyC~sG~RS~~AA~~L~~~Gf~nVy~LdGG~~aWkaAGLPV~~~~~~~~lel~~e~~~~I~~qV~~~~l~llG~~~G 436 (558)
+||++-..+..+..-...+..+|| +|+.++= ...|..-.........+.+-++..++++.+...++.++|+-.|
T Consensus 83 ~vv~~hG~~~~~~~~~~~~~~lg~-~Vi~~D~-----~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~v~lvGhS~G 156 (330)
T 3p2m_A 83 RVIFLHGGGQNAHTWDTVIVGLGE-PALAVDL-----PGHGHSAWREDGNYSPQLNSETLAPVLRELAPGAEFVVGMSLG 156 (330)
T ss_dssp SEEEECCTTCCGGGGHHHHHHSCC-CEEEECC-----TTSTTSCCCSSCBCCHHHHHHHHHHHHHHSSTTCCEEEEETHH
T ss_pred eEEEECCCCCccchHHHHHHHcCC-eEEEEcC-----CCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEECHh
Confidence 344443333333333445566799 6887752 1122211111112333444566677777777777888888877
Q ss_pred hh
Q 008662 437 CF 438 (558)
Q Consensus 437 ~~ 438 (558)
..
T Consensus 157 g~ 158 (330)
T 3p2m_A 157 GL 158 (330)
T ss_dssp HH
T ss_pred HH
Confidence 44
Done!