Query 008663
Match_columns 558
No_of_seqs 513 out of 2825
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 08:49:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008663.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008663hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xzw_A Purple acid phosphatase 100.0 8.9E-70 3.1E-74 582.8 43.9 400 66-545 5-422 (426)
2 2qfp_A Purple acid phosphatase 100.0 7.9E-68 2.7E-72 567.3 43.0 397 69-545 2-415 (424)
3 2yeq_A Apased, PHOD, alkaline 100.0 1.3E-39 4.3E-44 356.5 40.6 315 94-427 15-389 (527)
4 3tgh_A Glideosome-associated p 100.0 3.3E-34 1.1E-38 296.8 24.7 253 208-548 3-310 (342)
5 1ute_A Protein (II purple acid 100.0 1.5E-29 5.1E-34 257.3 22.9 258 208-546 6-304 (313)
6 3ib7_A ICC protein; metallopho 99.9 4.3E-22 1.5E-26 204.4 21.2 197 207-449 24-242 (330)
7 2nxf_A Putative dimetal phosph 99.9 3.8E-21 1.3E-25 195.8 20.2 206 208-446 5-286 (322)
8 3d03_A Phosphohydrolase; glyce 99.9 1E-20 3.4E-25 188.8 22.5 180 209-425 1-202 (274)
9 2xmo_A LMO2642 protein; phosph 99.8 8.3E-18 2.8E-22 180.2 24.0 194 207-425 38-288 (443)
10 2yvt_A Hypothetical protein AQ 99.5 3.8E-13 1.3E-17 132.9 14.8 218 208-447 5-240 (260)
11 1uf3_A Hypothetical protein TT 99.5 4.7E-13 1.6E-17 129.1 14.3 191 208-447 5-208 (228)
12 2q8u_A Exonuclease, putative; 99.4 3.9E-13 1.4E-17 138.7 11.9 188 208-425 18-235 (336)
13 2a22_A Vacuolar protein sortin 99.2 2.4E-10 8.1E-15 110.4 16.8 143 208-448 25-171 (215)
14 1z2w_A Vacuolar protein sortin 99.2 8.1E-10 2.8E-14 104.5 20.2 134 208-448 10-147 (192)
15 3rl5_A Metallophosphoesterase 99.2 2.4E-10 8.4E-15 115.1 15.4 195 208-449 59-278 (296)
16 3ck2_A Conserved uncharacteriz 99.2 8.2E-10 2.8E-14 103.0 17.2 58 375-448 78-135 (176)
17 1nnw_A Hypothetical protein; s 99.2 4.8E-11 1.6E-15 117.6 8.7 186 209-448 2-197 (252)
18 3av0_A DNA double-strand break 99.1 3.7E-10 1.3E-14 118.8 14.5 174 208-424 20-212 (386)
19 3qfm_A SAPH, putative uncharac 99.1 1.5E-10 5E-15 115.8 10.6 185 208-449 11-196 (270)
20 3tho_B Exonuclease, putative; 99.1 5.3E-10 1.8E-14 117.3 13.8 189 209-425 1-217 (379)
21 1xm7_A Hypothetical protein AQ 99.0 1.9E-09 6.4E-14 102.2 10.6 48 375-425 107-154 (195)
22 1s3l_A Hypothetical protein MJ 98.9 5E-09 1.7E-13 99.1 11.7 140 209-448 26-167 (190)
23 2kkn_A Uncharacterized protein 98.9 2.6E-08 8.9E-13 93.1 16.4 62 208-303 22-86 (178)
24 3rqz_A Metallophosphoesterase; 98.9 5.6E-09 1.9E-13 102.6 10.3 152 208-423 3-155 (246)
25 3t1i_A Double-strand break rep 98.8 3.6E-07 1.2E-11 96.6 22.6 41 207-247 31-84 (431)
26 4fbw_A DNA repair protein RAD3 98.8 1.7E-07 5.9E-12 98.6 18.9 41 207-247 12-65 (417)
27 1ii7_A MRE11 nuclease; RAD50, 98.8 1.8E-08 6.1E-13 103.6 10.6 73 209-303 1-88 (333)
28 4fbk_A DNA repair and telomere 98.7 7.1E-07 2.4E-11 94.8 20.5 41 207-247 75-128 (472)
29 2z1a_A 5'-nucleotidase; metal- 98.5 4.8E-07 1.6E-11 99.4 12.9 174 207-424 28-244 (552)
30 1hp1_A 5'-nucleotidase; metall 98.4 6.2E-07 2.1E-11 97.7 11.0 185 207-424 7-233 (516)
31 3qfk_A Uncharacterized protein 98.4 3.2E-06 1.1E-10 92.2 15.3 186 208-424 19-253 (527)
32 1su1_A Hypothetical protein YF 98.4 8.8E-07 3E-11 84.7 8.8 75 209-303 26-101 (208)
33 4h2g_A 5'-nucleotidase; dimer, 98.3 2.2E-06 7.5E-11 94.0 11.0 176 207-423 24-245 (546)
34 2wdc_A SOXB, sulfur oxidation 98.3 1.2E-05 4.3E-10 88.2 16.5 144 235-423 123-291 (562)
35 3ztv_A NAD nucleotidase, NADN; 98.3 4.9E-06 1.7E-10 91.8 13.1 176 207-423 11-231 (579)
36 3ive_A Nucleotidase; structura 98.2 1.1E-05 3.9E-10 87.5 13.4 188 208-422 6-237 (509)
37 1g5b_A Serine/threonine protei 98.1 1.5E-06 5.3E-11 83.6 4.1 39 208-246 12-52 (221)
38 3c9f_A 5'-nucleotidase; 2',3'- 98.1 5.8E-05 2E-09 82.7 17.0 195 196-423 3-243 (557)
39 2z06_A Putative uncharacterize 98.0 0.00011 3.6E-09 72.0 15.5 188 209-449 1-197 (252)
40 1t71_A Phosphatase, conserved 98.0 7.1E-05 2.4E-09 74.5 14.3 191 208-449 4-210 (281)
41 1t70_A Phosphatase; crystal, X 98.0 0.00016 5.3E-09 71.1 15.4 189 209-450 1-201 (255)
42 3gve_A YFKN protein; alpha-bet 97.8 0.00016 5.6E-09 74.2 14.0 58 360-422 195-253 (341)
43 3jyf_A 2',3'-cyclic nucleotide 97.5 0.0012 4.3E-08 67.5 15.3 40 207-246 7-64 (339)
44 4h1s_A 5'-nucleotidase; hydrol 97.5 0.0012 4.1E-08 71.8 15.2 173 207-423 2-223 (530)
45 2ede_A Netrin receptor DCC; tu 96.7 0.014 5E-07 48.6 11.5 96 84-204 10-111 (114)
46 2crz_A Fibronectin type-III do 96.5 0.011 3.7E-07 49.3 9.1 92 85-202 11-105 (110)
47 1x4y_A Biregional cell adhesio 96.5 0.024 8.2E-07 47.5 11.0 40 165-204 69-111 (114)
48 1x4x_A Fibronectin type-III do 96.4 0.01 3.6E-07 49.2 8.2 37 166-202 62-101 (106)
49 2edd_A Netrin receptor DCC; tu 96.3 0.06 2.1E-06 46.1 12.7 37 165-201 78-117 (123)
50 1x5l_A Ephrin type-A receptor 96.3 0.024 8.2E-07 47.0 9.6 39 166-204 67-108 (111)
51 2haz_A N-CAM 1, neural cell ad 96.2 0.021 7.2E-07 47.2 8.7 36 165-200 66-104 (105)
52 1x5f_A Neogenin; RGM binding, 96.1 0.067 2.3E-06 44.8 12.1 93 85-203 20-116 (120)
53 2qjc_A Diadenosine tetraphosph 96.1 0.0028 9.7E-08 62.4 3.3 38 209-246 19-58 (262)
54 1x5x_A Fibronectin type-III do 95.9 0.044 1.5E-06 45.3 9.5 37 166-202 65-104 (109)
55 2edy_A Receptor-type tyrosine- 95.9 0.012 4.1E-07 48.1 5.8 35 166-200 65-102 (103)
56 2djs_A Ephrin type-B receptor 95.8 0.033 1.1E-06 46.0 8.5 39 165-203 63-104 (108)
57 2dm4_A Sortilin-related recept 95.8 0.058 2E-06 44.5 9.9 89 85-201 10-102 (108)
58 1x5j_A Neogenin; RGM binding, 95.8 0.036 1.2E-06 46.8 8.6 95 84-201 10-107 (113)
59 2dfj_A Diadenosinetetraphospha 95.8 0.0045 1.5E-07 61.6 3.2 38 209-246 1-40 (280)
60 2ed8_A Netrin receptor DCC; tu 95.7 0.084 2.9E-06 43.2 10.5 89 85-202 10-101 (106)
61 2dbj_A Proto-oncogene tyrosine 95.6 0.15 5.1E-06 43.3 12.0 38 166-203 80-120 (124)
62 2ee2_A Contactin-1; neural cel 95.6 0.11 3.9E-06 43.5 11.1 39 165-203 74-115 (119)
63 1x5g_A Neogenin; RGM binding, 95.5 0.071 2.4E-06 44.4 9.6 89 85-202 20-111 (116)
64 1x5z_A Receptor-type tyrosine- 95.5 0.073 2.5E-06 44.1 9.5 38 165-202 70-110 (115)
65 2ed7_A Netrin receptor DCC; tu 95.5 0.15 5.2E-06 42.4 11.6 93 84-202 19-114 (119)
66 2e7h_A Ephrin type-B receptor 95.5 0.058 2E-06 44.7 8.7 38 166-203 65-105 (109)
67 3e0j_A DNA polymerase subunit 95.3 0.073 2.5E-06 56.4 10.8 138 208-367 200-378 (476)
68 3teu_A Fibcon; FN3 domain, fib 95.3 0.11 3.8E-06 42.0 9.7 88 85-201 4-91 (98)
69 2ee3_A Collagen alpha-1(XX) ch 95.2 0.17 5.8E-06 42.4 10.8 89 84-202 9-99 (108)
70 2edx_A Protein tyrosine phosph 95.2 0.17 5.9E-06 43.0 11.2 39 164-202 78-119 (134)
71 2ed9_A Netrin receptor DCC; tu 95.2 0.11 3.6E-06 43.8 9.7 90 85-200 31-123 (124)
72 2ie4_C PP2A-alpha;, serine/thr 95.1 0.013 4.5E-07 59.1 4.2 23 400-422 223-245 (309)
73 2dkm_A Collagen alpha-1(XX) ch 95.1 0.092 3.2E-06 43.3 8.7 37 166-202 62-100 (104)
74 1wfo_A Sidekick 2; FN3, cell a 95.1 0.2 6.9E-06 42.5 11.3 94 85-203 30-126 (130)
75 2vkw_A Neural cell adhesion mo 95.1 0.14 4.8E-06 47.2 11.0 95 84-201 10-107 (209)
76 2dju_A Receptor-type tyrosine- 95.1 0.14 4.7E-06 41.6 9.8 37 166-202 62-101 (106)
77 2kbg_A N-CAM 2, neural cell ad 95.0 0.091 3.1E-06 44.6 8.7 83 95-202 19-103 (114)
78 2crm_A Fibronectin type-III do 95.0 0.043 1.5E-06 46.2 6.6 37 166-202 76-115 (120)
79 1va9_A DOWN syndrome cell adhe 94.9 0.11 3.8E-06 43.4 9.0 95 85-202 18-118 (122)
80 3b83_A Ten-D3; beta sheet, com 94.8 0.35 1.2E-05 39.3 11.6 79 85-192 4-82 (100)
81 1x5h_A Neogenin; RGM binding, 94.8 0.17 5.8E-06 43.1 10.0 38 164-201 76-116 (132)
82 1k85_A Chitinase A1; fibronect 94.8 0.17 5.7E-06 40.1 9.2 33 166-198 52-88 (88)
83 2dmk_A Midline 2 isoform 2; mi 94.8 0.1 3.6E-06 44.7 8.5 36 166-201 81-118 (127)
84 2db8_A Tripartite motif protei 94.7 0.053 1.8E-06 45.3 6.3 38 166-203 66-106 (110)
85 2dlh_A Receptor-type tyrosine- 94.7 0.4 1.4E-05 39.8 11.9 38 165-202 76-116 (121)
86 1wis_A KIAA1514 protein; FNIII 94.7 0.16 5.6E-06 43.1 9.5 38 165-202 79-120 (124)
87 1uc6_A CNTF receptor, ciliary 94.6 0.26 8.8E-06 40.9 10.4 89 84-198 9-105 (109)
88 3lpw_A A77-A78 domain from tit 94.6 0.27 9.3E-06 44.3 11.4 76 85-186 8-83 (197)
89 1x3d_A Fibronectin type-III do 94.6 0.2 6.7E-06 41.8 9.6 37 166-202 74-113 (118)
90 2cui_A Tenascin-X; fibronectin 94.5 0.16 5.4E-06 42.9 8.9 89 84-202 10-109 (112)
91 3p4l_A Neogenin; iron homeosta 94.5 0.4 1.4E-05 44.1 12.6 37 165-201 64-103 (211)
92 1x5a_A Ephrin type-A receptor 94.5 0.043 1.5E-06 45.7 5.2 38 167-204 64-104 (107)
93 2rb8_A Tenascin; beta sheet,lo 94.4 0.32 1.1E-05 39.9 10.4 89 85-203 5-96 (104)
94 1fjm_A Protein serine/threonin 94.4 0.025 8.6E-07 57.5 4.1 38 209-246 57-95 (330)
95 2z72_A Protein-tyrosine-phosph 94.4 0.023 7.7E-07 58.2 3.8 24 400-423 268-291 (342)
96 2yux_A Myosin-binding protein 94.3 0.24 8.1E-06 41.7 9.6 81 85-191 20-100 (120)
97 1x4z_A Biregional cell adhesio 94.3 0.15 5E-06 43.0 8.2 77 85-186 20-97 (121)
98 2gee_A Hypothetical protein; f 94.2 0.68 2.3E-05 42.6 13.4 103 85-216 25-127 (203)
99 3n1f_C Cell adhesion molecule- 94.0 0.37 1.3E-05 39.4 10.0 89 84-198 6-101 (102)
100 2e3v_A Neural cell adhesion mo 94.0 0.18 6.2E-06 42.7 8.3 37 166-202 68-107 (122)
101 3tes_A Tencon; fibronectin typ 94.0 0.2 6.9E-06 40.8 8.2 78 85-192 4-82 (98)
102 2dle_A Receptor-type tyrosine- 94.0 0.45 1.5E-05 39.5 10.4 39 165-203 59-99 (104)
103 1uen_A KIAA0343 protein; immun 93.9 0.16 5.4E-06 42.7 7.7 38 165-202 80-120 (125)
104 2dn7_A Receptor-type tyrosine- 93.9 0.57 1.9E-05 38.0 10.9 87 86-201 11-100 (107)
105 1qr4_A Protein (tenascin); fib 93.8 0.24 8.2E-06 44.7 9.3 88 84-201 96-185 (186)
106 3f7q_A Integrin beta-4, GP150; 93.8 0.48 1.7E-05 44.5 11.7 88 84-201 7-97 (234)
107 3up1_A Interleukin-7 receptor 93.8 0.33 1.1E-05 46.3 10.4 98 81-202 111-216 (223)
108 3e7a_A PP-1A, serine/threonine 93.7 0.043 1.5E-06 54.9 4.1 23 399-421 228-250 (299)
109 1x5y_A Myosin binding protein 93.7 0.17 5.9E-06 41.8 7.3 77 85-186 11-87 (111)
110 1wao_1 Serine/threonine protei 93.7 0.079 2.7E-06 56.4 6.5 25 400-424 387-411 (477)
111 2yuw_A Myosin binding protein 93.7 0.18 6E-06 41.6 7.3 22 165-186 65-86 (110)
112 2cuh_A Tenascin-X; fibronectin 93.7 0.32 1.1E-05 40.6 9.0 37 165-201 59-97 (115)
113 2cum_A Tenascin-X; hexabrachio 93.6 0.48 1.6E-05 38.9 10.0 37 165-201 59-97 (105)
114 1uem_A KIAA1568 protein; immun 93.6 0.2 7E-06 41.5 7.7 36 166-201 73-112 (117)
115 1wk0_A KIAA0970 protein; fibro 93.6 0.036 1.2E-06 48.9 3.0 47 165-211 82-131 (137)
116 3ll8_A Serine/threonine-protei 93.5 0.045 1.5E-06 56.0 4.0 22 400-421 250-271 (357)
117 3h63_A Serine/threonine-protei 93.5 0.068 2.3E-06 53.9 5.2 23 399-421 233-255 (315)
118 1bpv_A Titin, A71, connectin; 93.5 0.32 1.1E-05 40.8 8.7 24 166-189 69-92 (112)
119 3n06_B PRL-R, prolactin recept 93.5 0.44 1.5E-05 44.0 10.6 94 83-199 103-203 (210)
120 3icf_A PPT, serine/threonine-p 93.4 0.067 2.3E-06 54.4 5.0 24 399-422 237-260 (335)
121 3mpc_A FN3-like protein; fibro 93.2 0.65 2.2E-05 38.4 10.1 33 168-200 60-95 (103)
122 1qr4_A Protein (tenascin); fib 93.0 0.41 1.4E-05 43.1 9.5 88 84-202 8-97 (186)
123 1v5j_A KIAA1355 protein, RSGI 93.0 0.31 1E-05 40.9 7.7 93 84-203 9-104 (108)
124 1bqu_A Protein (GP130); cytoki 92.7 0.32 1.1E-05 45.0 8.3 96 83-201 104-206 (215)
125 1cd9_B G-CSF-R, protein (G-CSF 92.7 0.64 2.2E-05 42.9 10.5 93 83-200 109-213 (215)
126 1aui_A Calcineurin, serine/thr 92.6 0.087 3E-06 56.3 4.6 23 400-422 263-285 (521)
127 1j8k_A Fibronectin; EDA, TYPEI 92.6 0.98 3.3E-05 35.8 10.1 36 164-199 54-91 (94)
128 1eer_B Epobp, erythropoietin r 92.5 0.53 1.8E-05 44.4 9.7 93 82-198 121-221 (227)
129 2ibg_A CG9211-PA, GH03927P; IH 92.5 0.63 2.2E-05 42.7 10.1 35 166-200 175-212 (214)
130 1i1r_A GP130, interleukin-6 re 92.3 0.52 1.8E-05 46.2 9.8 95 83-200 200-301 (303)
131 2yrz_A Integrin beta-4; GP150, 92.3 0.89 3.1E-05 37.6 10.0 36 165-200 73-112 (118)
132 3k2m_C Monobody HA4; engineere 92.2 0.66 2.3E-05 37.7 8.8 74 85-186 7-81 (101)
133 2b5i_B Interleukin-2 receptor 92.0 0.67 2.3E-05 43.6 9.6 96 84-202 107-209 (214)
134 3lpw_A A77-A78 domain from tit 91.9 0.54 1.9E-05 42.2 8.7 80 84-190 104-183 (197)
135 1wfu_A Unnamed protein product 91.9 0.14 5E-06 43.8 4.4 37 166-202 76-115 (120)
136 3r8q_A Fibronectin; heparin, F 91.4 1.5 5.2E-05 42.3 12.0 90 84-202 22-113 (290)
137 2ic2_A CG9211-PA, GH03927P; IH 91.2 1.1 3.7E-05 37.5 9.2 23 164-186 70-92 (115)
138 1uey_A KIAA0343 protein; immun 91.2 1.8 6.2E-05 36.2 10.8 34 169-202 78-115 (127)
139 1fnf_A Fibronectin; RGD, extra 91.0 1.3 4.4E-05 44.3 11.3 93 84-202 3-95 (368)
140 3fl7_A Ephrin receptor; ATP-bi 91.0 0.62 2.1E-05 50.4 9.3 37 166-202 496-535 (536)
141 1x5i_A Neogenin; RGM binding, 91.0 2.5 8.7E-05 35.6 11.6 88 85-201 30-119 (126)
142 3l5i_A Interleukin-6 receptor 91.0 0.53 1.8E-05 45.5 8.1 35 166-200 254-290 (290)
143 3p4l_A Neogenin; iron homeosta 90.9 0.62 2.1E-05 42.8 8.2 94 84-200 107-204 (211)
144 1tdq_A Tenascin-R; extracellul 90.9 2.2 7.5E-05 40.8 12.5 91 84-201 106-198 (283)
145 1wf5_A Sidekick 2 protein; FNI 90.9 0.85 2.9E-05 37.9 8.3 37 165-201 76-116 (121)
146 1wj3_A KIAA1496 protein; beta 90.8 1.3 4.3E-05 37.2 9.2 36 166-202 74-112 (117)
147 2d9q_B Granulocyte colony-stim 90.6 1.3 4.4E-05 43.6 10.7 94 83-201 203-308 (313)
148 3t1w_A Four-domain fibronectin 90.2 1.3 4.3E-05 44.6 10.3 90 84-200 4-94 (375)
149 1oww_A FN, fibronectin first t 89.8 1.7 5.9E-05 35.1 8.4 87 84-198 6-96 (98)
150 2qbw_A PDZ-fibronectin fusion 89.7 1 3.4E-05 41.4 8.4 22 165-186 157-178 (195)
151 2ocf_D Fibronectin; estrogen r 89.7 0.96 3.3E-05 38.3 7.6 74 84-186 30-103 (121)
152 3qwq_B Adnectin; cell surface 89.7 0.85 2.9E-05 38.3 7.2 70 85-184 6-76 (114)
153 1tdq_A Tenascin-R; extracellul 89.3 3.1 0.0001 39.8 12.0 101 84-216 16-118 (283)
154 2edb_A Netrin receptor DCC; tu 89.2 0.89 3E-05 37.9 6.9 88 85-201 20-109 (116)
155 3t04_D Monobody 7C12; engineer 88.9 0.87 3E-05 37.2 6.5 76 85-186 10-85 (103)
156 3r8q_A Fibronectin; heparin, F 88.7 2 6.7E-05 41.5 10.1 88 84-201 114-203 (290)
157 1cfb_A Drosophila neuroglian; 88.6 1.9 6.5E-05 39.2 9.4 91 85-202 8-103 (205)
158 3qht_C Monobody YSMB-1; fibron 88.4 1.4 4.9E-05 35.2 7.5 72 85-186 7-79 (97)
159 1cfb_A Drosophila neuroglian; 88.1 2.4 8.3E-05 38.5 9.8 90 84-199 106-202 (205)
160 2gee_A Hypothetical protein; f 88.0 2 6.8E-05 39.3 9.1 79 85-191 116-194 (203)
161 1ujt_A KIAA1568 protein; fibro 87.7 0.7 2.4E-05 39.3 5.3 39 164-202 74-115 (120)
162 1wfn_A Sidekick 2; FN3, cell a 87.6 2 7E-05 35.4 8.2 24 164-187 73-96 (119)
163 3v6o_A Leptin receptor; recept 87.1 1.8 6.3E-05 40.0 8.4 77 82-184 109-186 (206)
164 2jll_A NCAM2, neural cell adhe 87.0 3.1 0.00011 41.6 10.8 37 165-202 349-388 (389)
165 2w1n_A O-GLCNACASE NAGJ; hexos 86.0 2.7 9.2E-05 39.7 8.5 33 167-199 202-237 (238)
166 2q7n_A Leukemia inhibitory fac 85.9 1.1 3.9E-05 47.8 6.9 96 83-201 387-487 (488)
167 2ha1_A Fibronectin; beta sandw 85.3 2.9 0.0001 37.8 8.7 88 85-200 2-93 (201)
168 1n26_A IL-6 receptor alpha cha 85.2 4.4 0.00015 40.0 10.6 92 83-198 197-295 (325)
169 3tgx_A Interleukin-21 receptor 84.8 3.4 0.00012 38.7 9.0 103 81-202 99-210 (219)
170 2vkw_A Neural cell adhesion mo 84.4 2.5 8.5E-05 38.5 7.8 33 165-197 165-200 (209)
171 3uto_A Twitchin; kinase, muscl 83.6 2.8 9.5E-05 45.6 8.9 69 97-191 23-91 (573)
172 2ekj_A Collagen alpha-1(XX) ch 83.5 0.58 2E-05 38.3 2.6 22 165-186 61-82 (105)
173 2h41_A Fibronectin; beta sandw 83.4 1.9 6.5E-05 35.1 5.7 27 165-191 59-85 (95)
174 1fnf_A Fibronectin; RGD, extra 83.4 3.5 0.00012 41.0 9.0 22 165-186 329-350 (368)
175 3e0g_A Leukemia inhibitory fac 83.2 1.3 4.4E-05 47.3 5.8 96 83-201 382-482 (483)
176 3f7q_A Integrin beta-4, GP150; 83.0 1.4 4.8E-05 41.3 5.5 38 165-202 160-201 (234)
177 1axi_B HGHBP, growth hormone r 82.9 2.6 9E-05 40.0 7.4 35 165-199 195-234 (236)
178 3csg_A MBP, maltose-binding pr 82.8 2.1 7.3E-05 44.8 7.3 74 85-186 372-445 (461)
179 3t1w_A Four-domain fibronectin 82.0 6 0.0002 39.5 10.1 35 166-200 332-368 (375)
180 1zlg_A Anosmin 1; insulin-like 81.9 6 0.00021 43.7 10.9 34 166-199 224-261 (680)
181 2b5i_C Cytokine receptor commo 81.8 4.9 0.00017 36.7 8.7 87 83-199 99-194 (199)
182 3mtr_A N-CAM-1, NCAM-1, neural 81.4 1.2 4E-05 40.9 4.2 39 165-203 173-214 (215)
183 2ibg_A CG9211-PA, GH03927P; IH 80.3 6.6 0.00023 35.6 9.1 23 163-185 68-90 (214)
184 3l5i_A Interleukin-6 receptor 80.2 17 0.00059 34.4 12.5 37 164-200 156-194 (290)
185 2erj_C Cytokine receptor commo 79.9 6.7 0.00023 37.5 9.2 89 83-201 137-234 (247)
186 1zlg_A Anosmin 1; insulin-like 79.1 15 0.00053 40.4 13.1 39 164-202 333-377 (680)
187 3fl7_A Ephrin receptor; ATP-bi 78.6 7.4 0.00025 41.9 9.9 39 164-202 399-443 (536)
188 2v5y_A Receptor-type tyrosine- 78.4 8.2 0.00028 42.8 10.6 98 84-201 361-460 (731)
189 3l5h_A Interleukin-6 receptor 77.6 1.8 6.2E-05 46.5 4.8 97 83-202 199-302 (589)
190 1iar_B Protein (interleukin-4 76.0 10 0.00035 34.9 9.0 100 81-201 96-201 (207)
191 3s98_A Interferon alpha/beta r 75.3 27 0.00094 34.0 12.4 36 166-201 160-200 (306)
192 4go6_B HCF C-terminal chain 1; 74.7 2.5 8.4E-05 39.9 4.3 36 166-201 47-85 (232)
193 3bpo_C Interleukin-13 receptor 74.3 7.3 0.00025 38.1 7.9 103 83-200 200-312 (314)
194 2jll_A NCAM2, neural cell adhe 73.1 31 0.0011 34.0 12.5 37 165-201 252-291 (389)
195 2gys_A Cytokine receptor commo 71.6 28 0.00095 35.5 11.9 113 82-216 108-229 (419)
196 3flo_A DNA polymerase alpha su 71.0 6.8 0.00023 41.2 6.9 92 207-303 146-247 (460)
197 3se4_A Interferon alpha/beta r 67.5 43 0.0015 34.0 12.3 35 166-200 164-203 (414)
198 4doh_R Interleukin-20 receptor 61.5 9 0.00031 35.8 5.2 37 166-202 174-215 (221)
199 2ha1_A Fibronectin; beta sandw 58.5 7.6 0.00026 34.9 4.0 27 165-191 165-191 (201)
200 2nzi_A Titin; IG-domain, FNIII 56.4 30 0.001 32.8 8.1 21 166-186 255-275 (305)
201 3lqm_A Interleukin-10 receptor 56.2 9.9 0.00034 34.8 4.3 36 166-201 156-196 (201)
202 1q38_A Fibronectin; amyloid fi 54.9 7.9 0.00027 30.3 2.8 34 166-199 39-74 (89)
203 2dtg_E Insulin receptor; IR ec 52.4 6.6 0.00023 45.0 2.9 39 165-203 549-595 (897)
204 1bqu_A Protein (GP130); cytoki 46.9 26 0.0009 31.5 5.7 34 165-198 62-98 (215)
205 3b4n_A Endo-pectate lyase; pec 45.9 23 0.00079 35.3 5.2 17 170-186 76-92 (344)
206 2gys_A Cytokine receptor commo 44.3 8.3 0.00028 39.6 1.9 34 165-198 377-418 (419)
207 3lb6_C IL-13, interleukin-13 r 41.5 7 0.00024 39.8 0.8 98 76-203 231-338 (380)
208 2uvf_A Exopolygalacturonase; G 39.9 25 0.00086 38.4 4.9 38 164-201 112-153 (608)
209 2dtg_E Insulin receptor; IR ec 38.6 26 0.00088 40.1 5.0 37 165-201 747-789 (897)
210 3l5h_A Interleukin-6 receptor 38.5 5.9 0.0002 42.3 -0.4 35 165-199 552-588 (589)
211 2mcm_A Macromomycin; apoprotei 36.9 28 0.00094 29.0 3.5 28 152-182 8-35 (112)
212 1noa_A Neocarzinostatin; antib 36.8 28 0.00095 29.0 3.5 28 152-182 9-36 (113)
213 4doh_B Interleukin-20 receptor 36.8 17 0.00057 33.5 2.5 35 166-200 161-200 (206)
214 2v5y_A Receptor-type tyrosine- 31.0 91 0.0031 34.1 7.8 38 165-202 316-358 (731)
215 1i1r_A GP130, interleukin-6 re 30.0 92 0.0032 29.6 6.9 23 164-186 157-180 (303)
216 1cd9_B G-CSF-R, protein (G-CSF 25.8 2.2E+02 0.0074 25.2 8.3 96 84-198 6-103 (215)
217 3se4_A Interferon alpha/beta r 24.6 16 0.00054 37.4 0.0 37 165-201 367-410 (414)
No 1
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=100.00 E-value=8.9e-70 Score=582.82 Aligned_cols=400 Identities=37% Similarity=0.686 Sum_probs=339.8
Q ss_pred CCCCCCCCCCcccCCCCCCCCCeEEEEecCCC-CceEEEEEcC-cccccCCCCCCCCCCCccEEEEeccCCCCceEEEeE
Q 008663 66 NAIDLPDTDPRVQRTVEGFEPEQISVSLSSAH-DSVWISWITG-EFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGR 143 (558)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~P~qi~lt~~~~p-~s~~V~W~T~-~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~ 143 (558)
.++|+|.++|+++.+.....|+||||++++++ ++|+|+|+|. +. ...++|+|+++++.+..++.|+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~------------~~~~~V~y~~~~~~~~~~~~~~ 72 (426)
T 1xzw_A 5 EDVDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDK------------AGANKVFYWSENSKSQKRAMGT 72 (426)
T ss_dssp HHHBCCTTCGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSCC------------TTTTEEEEEETTCCCCEEEECE
T ss_pred ccccCCCCCCcccCCCCCCCCceEEEEECCCCCCeEEEEEEeCCCC------------CCCCEEEEecCCCCCceEEEEE
Confidence 36899999999999888899999999999987 9999999997 42 1357999999998888888888
Q ss_pred EEEeeeecccCCccccccCcEEEEEeCCCCCCCEEEEEEecCCCCCccceeEEEcCCCCCCCCCCeEEEEEecCCCCCCh
Q 008663 144 SLVYSQLYPFLGLQNYTSGIIHHVRLTGLKPDTLYHYQCGDPSIPAMSGTYCFRTMPDSSSTSYPSRIAIVGDVGLTYNT 223 (558)
Q Consensus 144 ~~~y~~~~~~~g~~~~~~~~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~P~~~~~~~~~rfavigD~g~~~~~ 223 (558)
..+|+.. ++.++++|+|+|+||+|+|+|+|||+.+ .+|++++|+|+|.++.. .++||+++||+|.....
T Consensus 73 ~~~~~~~-------~~~~~~~~~v~l~gL~p~t~Y~Yrv~~g---~~s~~~~f~T~p~~~~~-~~~~f~~~gD~~~~~~~ 141 (426)
T 1xzw_A 73 VVTYKYY-------NYTSAFIHHCTIKDLEYDTKYYYRLGFG---DAKRQFWFVTPPKPGPD-VPYVFGLIGDIGQTHDS 141 (426)
T ss_dssp EECCEET-------TEECCEEEEEEECCCCTTCEEEEEECCG---GGCEEEEEECCCCCCTT-CCEEEEEECSCTTBHHH
T ss_pred EEEEEec-------CCcCCEEEEEEECCCCCCCEEEEEECCC---CccceeEEECCCCCCCC-CCeEEEEEEeCCCCCch
Confidence 8776532 3457899999999999999999999873 58999999999986654 48999999999986545
Q ss_pred HHHHHHHHhC--CCCEEEEcCCcccccccccCCCCCccccccCCCCCCccchhHHHHHHHHhhhhhhccCCceeecCCCc
Q 008663 224 TSTVSHMISN--RPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHE 301 (558)
Q Consensus 224 ~~~l~~l~~~--~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y~~~wd~~~~~l~~l~~~~P~~~v~GNHD 301 (558)
..+++++.+. +|||||++||++|+++... ..+.+|+.|.+.++++.+.+|+|+++||||
T Consensus 142 ~~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~-------------------~~~~~~~~~~~~l~~l~~~~P~~~v~GNHD 202 (426)
T 1xzw_A 142 NTTLTHYEQNSAKGQAVLFMGDLSYSNRWPN-------------------HDNNRWDTWGRFSERSVAYQPWIWTAGNHE 202 (426)
T ss_dssp HHHHHHHHHCTTCCSEEEECSCCCCGGGSGG-------------------GCTHHHHHHHHHHHHHHTTSCEECCCCGGG
T ss_pred HHHHHHHHhCCCCCCEEEeCCChhhcccCCc-------------------ccchHHHHHHHHHHHHHhcCCEEEeccccc
Confidence 6678888876 8999999999999754210 013579999999999888999999999999
Q ss_pred cccCc---cchhhHhhhhccCCCCCCCCCCCceEEEEEeCeEEEEEEcCcccCCCcHHHHHHHHHHHhhcccCCCCEEEE
Q 008663 302 YEEQA---ENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVSFDKSGDQYKWLEEDLANVEREVTPWLVA 378 (558)
Q Consensus 302 ~~~~~---~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~LDt~~~~~~~~~Q~~WL~~~L~~~~~~~~~wvIv 378 (558)
+.... ....|..|.++|.+|.+..+...+.||+|++|+++||+||++..+..+.+|++||+++|+++++++++|+||
T Consensus 203 ~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv 282 (426)
T 1xzw_A 203 IDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIV 282 (426)
T ss_dssp CCCBGGGTBCSTTHHHHHHSCCCCGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEE
T ss_pred cccCCccccccCChhheEEEeCCcccCCCCCCCeEEEEECCEEEEEeeCcccCCCCHHHHHHHHHHHHhhhhcCCCEEEE
Confidence 97542 124678899999999765555678899999999999999999877788999999999999987778899999
Q ss_pred EeCCcccccCCCcccchHHHHHHHHHHHHHcCCcEEEECcccCceeeeeccCCc-----------cCCCCcEEEEeCCCc
Q 008663 379 TWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYT-----------LDPCGPVHITVGDGG 447 (558)
Q Consensus 379 ~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~v~~~~-----------~~~~g~vyiv~G~gG 447 (558)
++|+|+|+....++.+...+|+.|+++|.+++||++|+||+|.|+|++|+++.+ .+++|++||++|+||
T Consensus 283 ~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~~~~~~g~~~~~~~~~g~~yi~~G~gG 362 (426)
T 1xzw_A 283 LVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGG 362 (426)
T ss_dssp ECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSTTCCCCCEECTTSCEEEEECCSC
T ss_pred EeccCceeCCCcccCCCHHHHHHHHHHHHHhCCCEEEEcChhhheeeeeecCccccccCCccccccCCCccEEEEeCCCc
Confidence 999999987654555567789999999999999999999999999999988765 347899999999999
Q ss_pred ccCCcCCCCCCCCCCCCCCCCCCCeecCCCcccccccccCCCCCCCCCCCCCCccceeeCCcceEEEEEecCCeEEEEEE
Q 008663 448 NREKMAVPHADEPGNCPEPSTTPDKILGGGKFCGFNFTSGPASGKFCWDRQPDYSAFRESSFGHGILEVKNETHALWTWH 527 (558)
Q Consensus 448 ~~~~~~~~~~d~~~~~p~~~~~~~~~~~g~~~~~~n~t~~p~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~ 527 (558)
+.+.... .|. ..+|+|++|++.+|||++|+|.|+|+++|+|+
T Consensus 363 ~~~~~~~----------------------------~~~----------~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~ 404 (426)
T 1xzw_A 363 NSEGLAS----------------------------EMT----------QPQPSYSAFREASFGHGIFDIKNRTHAHFSWH 404 (426)
T ss_dssp CTTCCCC----------------------------CBC----------SSCCTTEEEEECCCEEEEEEECSSSEEEEEEE
T ss_pred ccccccc----------------------------ccC----------CCCCCceeEEecCCCeEEEEEEcCCeEEEEEE
Confidence 9775321 010 35799999999999999999999999999999
Q ss_pred EecCCcceeeeEEEEEeC
Q 008663 528 RNQDFYEAAGDQIYIVRQ 545 (558)
Q Consensus 528 ~~~d~~~~~~D~~~i~~~ 545 (558)
+++|+...+.|+|||+|+
T Consensus 405 ~~~dg~~~~~D~~~i~~~ 422 (426)
T 1xzw_A 405 RNQDGASVEADSLWLLNR 422 (426)
T ss_dssp ETTSCTTCCSEEEEEECS
T ss_pred ECCCCCEEEeEEEEEEec
Confidence 999986569999999997
No 2
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=100.00 E-value=7.9e-68 Score=567.32 Aligned_cols=397 Identities=37% Similarity=0.684 Sum_probs=331.4
Q ss_pred CCCCCCCcccCCCCCCCCCeEEEEecCCC-CceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEe
Q 008663 69 DLPDTDPRVQRTVEGFEPEQISVSLSSAH-DSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVY 147 (558)
Q Consensus 69 ~~~~~~~~~~~~~~~~~P~qi~lt~~~~p-~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y 147 (558)
|+|.++++++.+...+.|+||||+++.++ ++|+|+|+|.+.. ..++|+||++++.+..++.|++.+|
T Consensus 2 ~~~~~~~~~~~~~~~~~P~~v~l~~~~~~~~~~~v~W~t~~~~------------~~~~V~~~~~~~~~~~~~~g~~~~~ 69 (424)
T 2qfp_A 2 DMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEP------------GSSAVRYWSEKNGRKRIAKGKMSTY 69 (424)
T ss_dssp BCCTTSGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSSC------------CCCCEEEEESSSCCCEEECCEEECC
T ss_pred CCCCCCCcccCCCCCCCCceEEEEecCCCCCeEEEEEECCCCC------------CCCEEEEEeCCCCCceEEEEEEEEE
Confidence 78999999888877779999999999876 8999999996531 3578999999998888888988776
Q ss_pred eeecccCCccccccCcEEEEEeCCCCCCCEEEEEEecCCCCCccceeEEEcCCCCCCCCCCeEEEEEecCCCCCChHHHH
Q 008663 148 SQLYPFLGLQNYTSGIIHHVRLTGLKPDTLYHYQCGDPSIPAMSGTYCFRTMPDSSSTSYPSRIAIVGDVGLTYNTTSTV 227 (558)
Q Consensus 148 ~~~~~~~g~~~~~~~~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~P~~~~~~~~~rfavigD~g~~~~~~~~l 227 (558)
+.. ++.++++|+|+|+||+|+|+|+|||+.+ .+|++++|+|+|.++.. .++||+++||+|.......++
T Consensus 70 ~~~-------~~~~~~~~~v~l~gL~p~t~Y~Yrv~~~---~~s~~~~f~T~p~~~~~-~~~~f~~igD~~~~~~~~~~l 138 (424)
T 2qfp_A 70 RFF-------NYSSGFIHHTTIRKLKYNTKYYYEVGLR---NTTRRFSFITPPQTGLD-VPYTFGLIGDLGQSFDSNTTL 138 (424)
T ss_dssp BCS-------SCBCCEEEEEEECSCCTTCEEEEEECCS---SSCEEEEEECCCCCCTT-CCEEEEEECSCTTBHHHHHHH
T ss_pred Eec-------CCCCCEEEEEEECCCCCCCEEEEEECCC---CccceEEEECCCCCCCC-CCeEEEEEEeCCCCCChHHHH
Confidence 531 3467899999999999999999999975 47899999999987654 489999999999875555677
Q ss_pred HHHHhC--CCCEEEEcCCcccccccccCCCCCccccccCCCCCCccchhHHHHHHHHhhhhhhccCCceeecCCCccccC
Q 008663 228 SHMISN--RPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQ 305 (558)
Q Consensus 228 ~~l~~~--~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y~~~wd~~~~~l~~l~~~~P~~~v~GNHD~~~~ 305 (558)
+++.+. +|||||++||++|++++.. ..+.+|+.|.+.++++.+.+|+|+++||||+...
T Consensus 139 ~~~~~~~~~~D~vl~~GDl~y~~~~~~-------------------~~~~~~~~~~~~l~~~~~~~P~~~v~GNHD~~~~ 199 (424)
T 2qfp_A 139 SHYELSPKKGQTVLFVGDLSYADRYPN-------------------HDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFA 199 (424)
T ss_dssp HHHHTCSSCCCEEEECSCCSCGGGSGG-------------------GCTHHHHHHHHHHHHHHTTSCEEECCCHHHHCCB
T ss_pred HHHHhCCCCCCEEEEcCcccccccccc-------------------ccchHHHHHHHHHHHHHhcCCeEeecCCcccccC
Confidence 887765 8999999999999753210 0135788999999988888999999999999743
Q ss_pred cc---chhhHhhhhccCCCCCCCCCCCceEEEEEeCeEEEEEEcCcccCCCcHHHHHHHHHHHhhcccCCCCEEEEEeCC
Q 008663 306 AE---NRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVSFDKSGDQYKWLEEDLANVEREVTPWLVATWHA 382 (558)
Q Consensus 306 ~~---~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~LDt~~~~~~~~~Q~~WL~~~L~~~~~~~~~wvIv~~H~ 382 (558)
.. ...|..|.++|.+|........+.||+|++|+++||+||++..+....+|++||+++|+++++++++|+||++|+
T Consensus 200 ~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~ 279 (424)
T 2qfp_A 200 PEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHS 279 (424)
T ss_dssp GGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSS
T ss_pred CcccccccchhhhhhccCCccccCCCCCcEEEEEECCEEEEEecCCccCCCcHHHHHHHHHHHhhhcccCCCEEEEEeCc
Confidence 21 125788999999997654456778999999999999999987776677999999999999877778999999999
Q ss_pred cccccCCCcccchHHHHHHHHHHHHHcCCcEEEECcccCceeeeeccCCc-----------cCCCCcEEEEeCCCcccCC
Q 008663 383 PWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYT-----------LDPCGPVHITVGDGGNREK 451 (558)
Q Consensus 383 P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~v~~~~-----------~~~~g~vyiv~G~gG~~~~ 451 (558)
|+++....++.+...+|+.|+++|.+++||++|+||+|.|+|++|+++.. .+++|++||++|+||+.+.
T Consensus 280 P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~vyi~~G~gg~~~~ 359 (424)
T 2qfp_A 280 PLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGV 359 (424)
T ss_dssp CSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCEECTTSCEEEEECCSCTTSC
T ss_pred CceecCcccccccHHHHHHHHHHHHHhCCcEEEECChhhhheeccccCcceeccCCccccccCCCCcEEEEecCCCCccc
Confidence 99987655555566789999999999999999999999999999886532 2568999999999999875
Q ss_pred cCCCCCCCCCCCCCCCCCCCeecCCCcccccccccCCCCCCCCCCCCCCccceeeCCcceEEEEEecCCeEEEEEEEecC
Q 008663 452 MAVPHADEPGNCPEPSTTPDKILGGGKFCGFNFTSGPASGKFCWDRQPDYSAFRESSFGHGILEVKNETHALWTWHRNQD 531 (558)
Q Consensus 452 ~~~~~~d~~~~~p~~~~~~~~~~~g~~~~~~n~t~~p~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~d 531 (558)
... +|+ ..||+||+||+.+|||++|+|.|+|++.|+|++++|
T Consensus 360 ~~~----------------------------~~~----------~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~~ 401 (424)
T 2qfp_A 360 IDS----------------------------NMI----------QPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQD 401 (424)
T ss_dssp CCC----------------------------CBC----------SSCCTTEEEEECCCEEEEEEECSSSEEEEEEEETTS
T ss_pred cCc----------------------------cCC----------CCCCCcceEEecCCCEEEEEEEcCcEEEEEEEECCC
Confidence 421 011 357999999999999999999999999999999988
Q ss_pred CcceeeeEEEEEeC
Q 008663 532 FYEAAGDQIYIVRQ 545 (558)
Q Consensus 532 ~~~~~~D~~~i~~~ 545 (558)
+.-.+.|+|||+|+
T Consensus 402 g~~~~~D~~~i~~~ 415 (424)
T 2qfp_A 402 GVAVEADSVWFFNR 415 (424)
T ss_dssp CTTCCSEEEEEECT
T ss_pred CCEEeeeEEEEEec
Confidence 84334799999998
No 3
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}
Probab=100.00 E-value=1.3e-39 Score=356.48 Aligned_cols=315 Identities=17% Similarity=0.215 Sum_probs=221.8
Q ss_pred cCCC-CceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCc--eEEEeEEEEeeeecccCCccccccCcEEEEEeC
Q 008663 94 SSAH-DSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLN--RKATGRSLVYSQLYPFLGLQNYTSGIIHHVRLT 170 (558)
Q Consensus 94 ~~~p-~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~--~~~~g~~~~y~~~~~~~g~~~~~~~~~h~v~l~ 170 (558)
++|| ...+|.|++..+..-.. ..+ ...+.+|+|..+.+... ....|...+. ...+++|+|+|+
T Consensus 15 sGDp~~~~vilWtr~~p~~~~~-~~~--~~~~~~v~~eva~d~~f~~~v~~g~~~a~-----------~~~~~t~~v~v~ 80 (527)
T 2yeq_A 15 SGDPLSDSVVLWTRLAPDPLNG-GGM--PKQAVPVKWEVAKDEHFRKIVRKGTEMAK-----------PSLAHSVHVEAD 80 (527)
T ss_dssp EECCCSSCEEEEEECCSBGGGT-BCC--CSSCEEEEEEEESSTTSSSEEEEEEEEEC-----------GGGTTEEEEEEC
T ss_pred ccCCCCCeEEEEEecCCcccCC-CCC--CCCceEEEEEEecCCccccceEeeeEEec-----------CCCceEEEeecC
Confidence 3567 44558899976521000 001 11356788888776654 3444544331 235799999999
Q ss_pred CCCCCCEEEEEEecCCCCCccceeEEEcCCCCCCCCCCeEEEEEecCCCCCChHHHHHHHHhCCCCEEEEcCCccccccc
Q 008663 171 GLKPDTLYHYQCGDPSIPAMSGTYCFRTMPDSSSTSYPSRIAIVGDVGLTYNTTSTVSHMISNRPDLILLVGDVTYANLY 250 (558)
Q Consensus 171 gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~P~~~~~~~~~rfavigD~g~~~~~~~~l~~l~~~~pDfvl~~GDl~Y~d~~ 250 (558)
||+|+|+|+|||+.++ .+|++++|||+|+++....++||+++||.+.......+++++.+.+||||||+||++|++..
T Consensus 81 gL~P~t~Y~Yr~~~~~--~~S~~g~frT~P~~~~~~~~~rfa~~sc~~~~~g~~~~~~~ia~~~~D~vlhlGD~iY~d~~ 158 (527)
T 2yeq_A 81 GLEPNKVYYYRFKTGH--ELSPVGKTKTLPAPGANVPQMTFAFASCQQYEHGYYTAYKHMAKEKLDLVFHLGDYIYEYGP 158 (527)
T ss_dssp SCCTTCEEEEEEEETT--EECCCEEEECCCCTTCCCCCEEEEEECCCCGGGCCCHHHHHHTTSCCSEEEECSCSSCCCCT
T ss_pred CcCCCCEEEEEEEeCC--CcCCCceEEcCCCCCCCCCCeEEEEEecCCCCCCccHHHHHHHhcCCCEEEecCCcccCCCC
Confidence 9999999999999865 68999999999988765458999999999875455678888888899999999999999754
Q ss_pred ccCCCCCccccccCC-CCCCccchhHHHHHHH--HhhhhhhccCCceeecCCCccccCccc-----------------hh
Q 008663 251 LTNGTGSDCYACSFA-NSPIHETYQPRWDYWG--RYMQPVLSKVPIMVVEGNHEYEEQAEN-----------------RT 310 (558)
Q Consensus 251 ~~~G~~~~~~~~~~~-~~~~~e~Y~~~wd~~~--~~l~~l~~~~P~~~v~GNHD~~~~~~~-----------------~~ 310 (558)
...+......+.... .....+.|+.+|..+. ..++.+.+.+|+|+++||||+.++... ..
T Consensus 159 ~~~~~~~~~~R~~~~~e~~tl~~yr~~y~~~~~dp~lq~~~a~~P~i~~wDDHE~~nn~~~~~~~~~~~~~~f~~rr~~A 238 (527)
T 2yeq_A 159 NEYVSKTGNVRTHNSAEIITLQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDHEVENNYANKIPEKGQSVEAFVLRRAAA 238 (527)
T ss_dssp TSSCCTTCCCSCCSSSSCCSHHHHHHHHHHHHTCHHHHHHHHHSEEEECCCSTTTSTTCBTTBCSTTCCHHHHHHHHHHH
T ss_pred CcccccccccccCCcccccCHHHHHHHHHHHhCCHHHHHHHhcCCEEEecccccccCCCCCCcccccCCcccHHHHHHHH
Confidence 211100000011000 0112245666676654 347778889999999999999865321 12
Q ss_pred hHhhhhccCCCCC--CCCCCCceEEEEEeCe-EEEEEEcCcccCC----------------------CcHHHHHHHHHHH
Q 008663 311 FVAYTSRFAFPSK--ESGSLSKFYYSFNAGG-IHFLMLAAYVSFD----------------------KSGDQYKWLEEDL 365 (558)
Q Consensus 311 ~~~y~~~f~~P~~--~~~~~~~~yYsf~~G~-v~fI~LDt~~~~~----------------------~~~~Q~~WL~~~L 365 (558)
+++|.++++++.. ..+.....||+|++|+ ++||+|||+.... .+.+|++||+++|
T Consensus 239 ~~ay~e~~P~~~~~~p~~~~~~~y~sf~~G~lv~~i~LDtR~yr~~~~~~~~~~~~~~~~~~~~~~~lG~~Q~~WL~~~L 318 (527)
T 2yeq_A 239 YQAYYEHMPLRISSLPNGPDMQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNNL 318 (527)
T ss_dssp HHHHHHHSCCCGGGCCBTTBCCCCEEEEETTTEEEEECCSSSSCCCCGGGSSEECCCHHHHCTTCCSSCHHHHHHHHHHH
T ss_pred HHHHHHhCCCCcccCCCCCCceEEEEEEcCCcceEEEEeccccccccccccccccccccccCCcccccCHHHHHHHHHHH
Confidence 4455554443321 1123457899999999 9999999975322 3689999999999
Q ss_pred hhcccCCCCEEEEEeCCcccccCC----------CcccchHHHHHHHHHHHHHcCCc--EEEECcccCceeeee
Q 008663 366 ANVEREVTPWLVATWHAPWYSTYK----------AHYREAECMRVAMEDLLYKYGVD--VVFNGHVHAYERSNR 427 (558)
Q Consensus 366 ~~~~~~~~~wvIv~~H~P~y~s~~----------~~~~~~~~~r~~l~~ll~~~~Vd--lvlsGH~H~yeR~~~ 427 (558)
++ ++++|+||++|+|++.... ..|......|++|+++|.+++|+ +||+||+|.+++...
T Consensus 319 ~~---s~a~W~Iv~s~~p~~~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~~v~n~vvLsGDvH~~~~~~~ 389 (527)
T 2yeq_A 319 GS---STAHWNVLAQQIFFAKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNNVVVLTGDVHASWASNL 389 (527)
T ss_dssp HH---CCSSEEEEECSSCCSCCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHTTCCCEEEEECSSSSEEEEEE
T ss_pred hc---CCCCeEEEEeCCcccccccCCCcccccCccchhccHHHHHHHHHHHHHhCCCCEEEEEcchHHHhHhhc
Confidence 98 4578999999999987532 33444567799999999999984 999999999999864
No 4
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.3e-34 Score=296.82 Aligned_cols=253 Identities=17% Similarity=0.216 Sum_probs=183.4
Q ss_pred CeEEEEEecCCCCCChHHHH----H-HHHhCCCCEEEEcCCcccccccccCCCCCccccccCCCCCCccchhHHHHHH-H
Q 008663 208 PSRIAIVGDVGLTYNTTSTV----S-HMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYW-G 281 (558)
Q Consensus 208 ~~rfavigD~g~~~~~~~~l----~-~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y~~~wd~~-~ 281 (558)
++||+++||+|.....+..+ . .+.+.+|||||++||++|. +.. +. ...+|... .
T Consensus 3 ~l~f~~igD~g~g~~~q~~va~~m~~~~~~~~pd~vl~~GD~~y~-G~~--~~-----------------~d~~~~~~f~ 62 (342)
T 3tgh_A 3 QLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFID-GVK--GL-----------------NDPAWKNLYE 62 (342)
T ss_dssp CEEEEECCSCBSCCHHHHHHHHHHHHHHHHTTCCEEEECSCSBTT-CCC--ST-----------------TCTHHHHHTT
T ss_pred eEEEEEEecCCCCCchHHHHHHHHHHHHhhcCCCEEEECCCcccC-CCC--cC-----------------ccHHHHHHHH
Confidence 68999999999764433322 2 2235799999999999985 210 00 12355433 3
Q ss_pred Hhhhhh--hccCCceeecCCCccccCccch-hhHh-------------------hhhccCCCCCCCCCCCceEEEE----
Q 008663 282 RYMQPV--LSKVPIMVVEGNHEYEEQAENR-TFVA-------------------YTSRFAFPSKESGSLSKFYYSF---- 335 (558)
Q Consensus 282 ~~l~~l--~~~~P~~~v~GNHD~~~~~~~~-~~~~-------------------y~~~f~~P~~~~~~~~~~yYsf---- 335 (558)
+.++.+ ..++||+.++||||+..+.... .+.. ...||.||. .||+|
T Consensus 63 ~~~~~~~~~~~~P~~~vlGNHD~~~~~~aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~--------~yY~~~~~f 134 (342)
T 3tgh_A 63 DVYSEEKGDMYMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKWIMPN--------YWYHYFTHF 134 (342)
T ss_dssp TTSCCGGGTTCSEEEECCCHHHHTSCHHHHHHHHHC---------------CCCSSCEEECSS--------SSEEEEEEE
T ss_pred HHhhhhhhhhCCCEEEeCCCCccCCCchHhhhhhhcccccccccccccccccccCCCCccCCc--------ceEEEEEEe
Confidence 333332 3589999999999998653211 1111 234555653 57765
Q ss_pred Ee---------C----eEEEEEEcCcccCC----------CcHHHHHHHHHHHhhcccCCCCEEEEEeCCcccccCCCcc
Q 008663 336 NA---------G----GIHFLMLAAYVSFD----------KSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHY 392 (558)
Q Consensus 336 ~~---------G----~v~fI~LDt~~~~~----------~~~~Q~~WL~~~L~~~~~~~~~wvIv~~H~P~y~s~~~~~ 392 (558)
.. | .++||+|||..... ...+|++||+++|++ ++|+||++|||+|+....
T Consensus 135 ~~~~~~~~~~~g~~~~~v~fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~~-----~~~~IV~~HhP~~~~~~~-- 207 (342)
T 3tgh_A 135 TVSSGPSIVKTGHKDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKKI-----ADFIIVVGDQPIYSSGYS-- 207 (342)
T ss_dssp EEC---------CEEEEEEEEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHHH-----CSEEEEECSSCSSCSSTT--
T ss_pred eccccccccccCCCCceEEEEEEeCcccccCCcccccchHHHHHHHHHHHHhhcc-----CCcEEEEECCCCCCCCCC--
Confidence 32 3 49999999974321 135899999999943 479999999999987532
Q ss_pred cchHHHHHHHHHHHHHcCCcEEEECcccCceeeeeccCCccCCCCcEEEEeCCCcccCCcCCCCCCCCCCCCCCCCCCCe
Q 008663 393 REAECMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYTLDPCGPVHITVGDGGNREKMAVPHADEPGNCPEPSTTPDK 472 (558)
Q Consensus 393 ~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~v~~~~~~~~g~vyiv~G~gG~~~~~~~~~~d~~~~~p~~~~~~~~ 472 (558)
.....+++.|+++|.+|+|+++|+||+|.|+|..+ +|+.||++|+||......
T Consensus 208 ~~~~~l~~~l~~ll~~~~VdlvlsGH~H~~~~~~~--------~g~~~iv~Ga~g~~~~~~------------------- 260 (342)
T 3tgh_A 208 RGSSYLAYYLLPLLKDAEVDLYISGHDNNMEVIED--------NDMAHITCGSGSMSQGKS------------------- 260 (342)
T ss_dssp CCCHHHHHHTHHHHHHTTCCEEEECSSSSEEEEEE--------TTEEEEEECCSSCCCCCC-------------------
T ss_pred CCcHHHHHHHHHHHHHcCCCEEEECCCcceeEEee--------CCcEEEEeCccccccccC-------------------
Confidence 33457799999999999999999999999999964 579999999998743210
Q ss_pred ecCCCcccccccccCCCCCCCCCCCCCCccceeeCCcceEEEEEecCCeEEEEEEEecCCcceeeeEEEEEeCCCC
Q 008663 473 ILGGGKFCGFNFTSGPASGKFCWDRQPDYSAFRESSFGHGILEVKNETHALWTWHRNQDFYEAAGDQIYIVRQPDL 548 (558)
Q Consensus 473 ~~~g~~~~~~n~t~~p~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~d~~~~~~D~~~i~~~~~~ 548 (558)
...++|++|+...+||.+|++ +++.+.++|+.+.+| +++|+++|.|+...
T Consensus 261 -----------------------~~~~~~s~f~~~~~Gf~~l~v-~~~~l~~~~~~~~~G--~vld~~~i~k~~~~ 310 (342)
T 3tgh_A 261 -----------------------GMKNSKSLFFSSDIGFCVHEL-SNNGIVTKFVSSKKG--EVIYTHKLNIKKKK 310 (342)
T ss_dssp -----------------------SSCCTTEEEEECSSEEEEEEE-ETTEEEEEEEETTTT--EEEEEEEEECCCCS
T ss_pred -----------------------CCCCCcceeecCCCcEEEEEE-ECCEEEEEEEECCCC--cEEEEEEEECCCCc
Confidence 013568899999999999999 678899999965666 89999999998654
No 5
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=99.97 E-value=1.5e-29 Score=257.31 Aligned_cols=258 Identities=19% Similarity=0.248 Sum_probs=174.3
Q ss_pred CeEEEEEecCCCCCC-------h---HHHHHH-HHhCCCCEEEEcCCcccccccccCCCCCccccccCCCCCCccchhHH
Q 008663 208 PSRIAIVGDVGLTYN-------T---TSTVSH-MISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPR 276 (558)
Q Consensus 208 ~~rfavigD~g~~~~-------~---~~~l~~-l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y~~~ 276 (558)
++||+++||+|.... . .+.+.+ +.+.+|||||++||++|.++....+ ..+
T Consensus 6 ~~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~-------------------~~~ 66 (313)
T 1ute_A 6 ILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAK-------------------DKR 66 (313)
T ss_dssp CEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTT-------------------CTH
T ss_pred ceEEEEEcccCCCCCccccCchHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcc-------------------hHH
Confidence 699999999998642 1 122333 3346899999999999864321100 112
Q ss_pred HHHHH-Hhhhhhhc-cCCceeecCCCccccCccc-hhhHhhhhccCCCCCCCCCCCceEEEEEe------CeEEEEEEcC
Q 008663 277 WDYWG-RYMQPVLS-KVPIMVVEGNHEYEEQAEN-RTFVAYTSRFAFPSKESGSLSKFYYSFNA------GGIHFLMLAA 347 (558)
Q Consensus 277 wd~~~-~~l~~l~~-~~P~~~v~GNHD~~~~~~~-~~~~~y~~~f~~P~~~~~~~~~~yYsf~~------G~v~fI~LDt 347 (558)
|.... +.++.... .+|+++++||||....... ..+.....+|.+| ..||++.+ ++++||+||+
T Consensus 67 ~~~~~~~~~~~~~l~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~--------~~~y~~~~~~~~~~~~~~~i~lds 138 (313)
T 1ute_A 67 FQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFP--------SPYYRLRFKIPRSNVSVAIFMLDT 138 (313)
T ss_dssp HHHHTTTTSCSGGGTTCCEEECCCHHHHHSCHHHHHHGGGTSTTEECC--------SSSEEEEEECTTSSCEEEEEECCH
T ss_pred HHHHHHHHcCchhhcCCCEEEECCCCccCCCccccccccccCCCccCc--------ccceEEEEecCCCCceEEEEEEEC
Confidence 32222 22221112 7999999999998643211 0122222344443 35888888 5899999998
Q ss_pred cccC-----------------CCcHHHHHHHHHHHhhcccCCCCEEEEEeCCcccccCCCcccchHHHHHHHHHHHHHcC
Q 008663 348 YVSF-----------------DKSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYG 410 (558)
Q Consensus 348 ~~~~-----------------~~~~~Q~~WL~~~L~~~~~~~~~wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~ 410 (558)
.... ..+.+|++||+++|++.. .+|+|+++|+|++..... ....++++.+.++|.+++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~wL~~~L~~~~---~~~~iv~~H~p~~~~~~~--~~~~~~~~~l~~~l~~~~ 213 (313)
T 1ute_A 139 VTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAAK---EDYVLVAGHYPVWSIAEH--GPTHCLVKQLLPLLTTHK 213 (313)
T ss_dssp HHHHCCGGGSTTCSCCSCSCHHHHHHHHHHHHHHHHHCC---CSEEEEECSSCSSCCSSS--CCCHHHHHHTHHHHHHTT
T ss_pred hHHhCcCccccccccCCccccchHHHHHHHHHHHHHhCC---CCeEEEEECCCCccCCCC--CCcHHHHHHHHHHHHHcC
Confidence 6411 125799999999999853 479999999999986532 223467889999999999
Q ss_pred CcEEEECcccCceeeeeccCCccCCCCcEEEEeCCCcccCCcCCCCCCCCCCCCCCCCCCCeecCCCcccccccccCCCC
Q 008663 411 VDVVFNGHVHAYERSNRVYNYTLDPCGPVHITVGDGGNREKMAVPHADEPGNCPEPSTTPDKILGGGKFCGFNFTSGPAS 490 (558)
Q Consensus 411 VdlvlsGH~H~yeR~~~v~~~~~~~~g~vyiv~G~gG~~~~~~~~~~d~~~~~p~~~~~~~~~~~g~~~~~~n~t~~p~~ 490 (558)
|+++|+||+|.+++..+ .+|+.||++|++|....... +.+ .
T Consensus 214 v~~~l~GH~H~~~~~~~-------~~g~~~i~~gs~~~~~~~~~-~~~---~---------------------------- 254 (313)
T 1ute_A 214 VTAYLCGHDHNLQYLQD-------ENGLGFVLSGAGNFMDPSKK-HLR---K---------------------------- 254 (313)
T ss_dssp CSEEEECSSSSEEEEEC-------TTCCEEEEECBSSCCCCCCT-TGG---G----------------------------
T ss_pred CcEEEECChhhhhhccC-------CCCceEEEECCCcCcCcccc-ccc---c----------------------------
Confidence 99999999999999852 56899999999986432110 000 0
Q ss_pred CCCCCCCCCCccceeeC----CcceEEEEEecCCeEEEEEEEecCCcceeeeEEEEEeCC
Q 008663 491 GKFCWDRQPDYSAFRES----SFGHGILEVKNETHALWTWHRNQDFYEAAGDQIYIVRQP 546 (558)
Q Consensus 491 ~~~~~~~~p~~s~~~~~----~~G~~~l~v~n~t~~~~~~~~~~d~~~~~~D~~~i~~~~ 546 (558)
..++++.|... .+||++|++ +++.+.++|+.. ++ ++.|+++|.|+.
T Consensus 255 ------~~~~~~~~~~~~~~~~~gy~~l~v-~~~~~~~~~~~~-~g--~~~~~~~l~~~~ 304 (313)
T 1ute_A 255 ------VPNGYLRFHFGAENSLGGFAYVEI-TPKEMSVTYIEA-SG--KSLFKTKLPRRA 304 (313)
T ss_dssp ------SCTTCEEEEECCTTSCCEEEEEEE-CSSCEEEEEEET-TS--CEEEEEEECCCC
T ss_pred ------CCCcccceeccCcCCCCceEEEEE-EcCEEEEEEEcC-CC--cEEEEEEecccc
Confidence 00123334332 389999999 677899999966 45 899999998873
No 6
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=99.89 E-value=4.3e-22 Score=204.36 Aligned_cols=197 Identities=17% Similarity=0.202 Sum_probs=136.9
Q ss_pred CCeEEEEEecCCCCCC-------------hHHHHHHHHh--CCCCEEEEcCCcccccccccCCCCCccccccCCCCCCcc
Q 008663 207 YPSRIAIVGDVGLTYN-------------TTSTVSHMIS--NRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHE 271 (558)
Q Consensus 207 ~~~rfavigD~g~~~~-------------~~~~l~~l~~--~~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e 271 (558)
.++||++++|+|.... ..++++.+.+ .++|+||++||+++. |.
T Consensus 24 ~~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~------~~---------------- 81 (330)
T 3ib7_A 24 PDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADK------GE---------------- 81 (330)
T ss_dssp CSEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTT------CC----------------
T ss_pred CCeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCC------CC----------------
Confidence 3799999999997421 1234555555 689999999999952 22
Q ss_pred chhHHHHHHHHhhhhhh--ccCCceeecCCCccccCccchhhHhhhhccCCCCCCCCCCCceEEEEEeCeEEEEEEcCcc
Q 008663 272 TYQPRWDYWGRYMQPVL--SKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYV 349 (558)
Q Consensus 272 ~Y~~~wd~~~~~l~~l~--~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~LDt~~ 349 (558)
...|..+.+.++.+. .++|+++++||||.. ..+........ ......+|++++++++||+||+..
T Consensus 82 --~~~~~~~~~~l~~l~~~~~~pv~~v~GNHD~~-----~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~lds~~ 148 (330)
T 3ib7_A 82 --PAAYRKLRGLVEPFAAQLGAELVWVMGNHDDR-----AELRKFLLDEA------PSMAPLDRVCMIDGLRIIVLDTSV 148 (330)
T ss_dssp --HHHHHHHHHHHHHHHHHHTCEEEECCCTTSCH-----HHHHHHHHCCC------CCCSCCCEEEEETTEEEEECCCCC
T ss_pred --HHHHHHHHHHHHHHHhhcCCCEEEeCCCCCCH-----HHHHHHhcccc------cccCCcceEEEeCCEEEEEecCCC
Confidence 134455556666553 278999999999984 22222221111 123457899999999999999875
Q ss_pred c----CCCcHHHHHHHHHHHhhcccCCCCEEEEEeCCcccccCCCcccc-hHHHHHHHHHHHHHcCCcEEEECcccCcee
Q 008663 350 S----FDKSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYRE-AECMRVAMEDLLYKYGVDVVFNGHVHAYER 424 (558)
Q Consensus 350 ~----~~~~~~Q~~WL~~~L~~~~~~~~~wvIv~~H~P~y~s~~~~~~~-~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR 424 (558)
. .....+|++||++.|++.... ++|+++|||++......... ....++.+.+++.+++++++|+||+|..+.
T Consensus 149 ~~~~~~~~~~~q~~wl~~~l~~~~~~---~~iv~~Hh~p~~~~~~~~~~~~~~~~~~l~~~l~~~~v~~v~~GH~H~~~~ 225 (330)
T 3ib7_A 149 PGHHHGEIRASQLGWLAEELATPAPD---GTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTN 225 (330)
T ss_dssp TTCCSBCCCHHHHHHHHHHTTSCCTT---CEEEECSSCSSCCSSGGGGGGSBSCHHHHHHHHTTSSEEEEEECSSSSCEE
T ss_pred CCCCCCccCHHHHHHHHHHHHhcccC---CeEEEEECCCCCCCccccccccccCHHHHHHHHhccCceEEEECCCCCccc
Confidence 3 234789999999999986433 27788888877653221110 112357888999999999999999999886
Q ss_pred eeeccCCccCCCCcEEEEeCCCccc
Q 008663 425 SNRVYNYTLDPCGPVHITVGDGGNR 449 (558)
Q Consensus 425 ~~~v~~~~~~~~g~vyiv~G~gG~~ 449 (558)
.. -+|+.+++.|+.+..
T Consensus 226 ~~--------~~g~~~~~~gs~~~~ 242 (330)
T 3ib7_A 226 AT--------FVGIPVSVASATCYT 242 (330)
T ss_dssp EE--------ETTEEEEECCCSSCE
T ss_pred ce--------ECCEEEEecCcceec
Confidence 53 357888888887753
No 7
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=99.87 E-value=3.8e-21 Score=195.75 Aligned_cols=206 Identities=19% Similarity=0.177 Sum_probs=133.3
Q ss_pred CeEEEEEecCCCCCCh--------------------HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCccccccCCCC
Q 008663 208 PSRIAIVGDVGLTYNT--------------------TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANS 267 (558)
Q Consensus 208 ~~rfavigD~g~~~~~--------------------~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~ 267 (558)
++||++++|+|..... .++++.+.+.+||+||++||+++...... .
T Consensus 5 ~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~~--~------------ 70 (322)
T 2nxf_A 5 VFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRR--D------------ 70 (322)
T ss_dssp SEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHT--T------------
T ss_pred ceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCcc--h------------
Confidence 6999999999987521 12344455678999999999996421000 0
Q ss_pred CCccchhHHHHHHHHhhhhhhccCCceeecCCCccccCccchhhHhhhhccCCCCCC--------CCCCCceEEEEEe-C
Q 008663 268 PIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKE--------SGSLSKFYYSFNA-G 338 (558)
Q Consensus 268 ~~~e~Y~~~wd~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~--------~~~~~~~yYsf~~-G 338 (558)
.....++.+.+.++.+ .+|+++++||||..... ...+.+.+..+... .......||+|+. +
T Consensus 71 ----~~~~~~~~~~~~l~~~--~~p~~~v~GNHD~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~ 140 (322)
T 2nxf_A 71 ----ASDRALDTVMAELDAC--SVDVHHVWGNHEFYNFS----RPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAP 140 (322)
T ss_dssp ----CHHHHHHHHHHHHHTT--CSEEEECCCHHHHHHCC----HHHHHTSTTCCCC------CEECGGGTCCCEEEEEET
T ss_pred ----HHHHHHHHHHHHHHhc--CCcEEEecCCCCcccCC----HHHHhhhhCCcccccccccccccCCCCceEEEEecCC
Confidence 0011223333344433 68999999999984211 11233333211000 0002357899998 8
Q ss_pred eEEEEEEcCccc----------------------------------------------CCCcHHHHHHHHHHHhhcccCC
Q 008663 339 GIHFLMLAAYVS----------------------------------------------FDKSGDQYKWLEEDLANVEREV 372 (558)
Q Consensus 339 ~v~fI~LDt~~~----------------------------------------------~~~~~~Q~~WL~~~L~~~~~~~ 372 (558)
+++||+||+... .....+|++||+++|+++.+..
T Consensus 141 ~~~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~~~ 220 (322)
T 2nxf_A 141 NFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQ 220 (322)
T ss_dssp TEEEEECCTTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHHT
T ss_pred CEEEEEEcCceecccccCCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHhcC
Confidence 999999998642 1124899999999999875322
Q ss_pred CCEEEEEeCCcccccCCCcccchHHHHHHHHHHHHHc-CCcEEEECcccCceeeeeccCCccCCCCcEEEEeCCC
Q 008663 373 TPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKY-GVDVVFNGHVHAYERSNRVYNYTLDPCGPVHITVGDG 446 (558)
Q Consensus 373 ~~wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~-~VdlvlsGH~H~yeR~~~v~~~~~~~~g~vyiv~G~g 446 (558)
.++||++|+|++....... .....++.+.+++.++ +|+++|+||+|.+++.. +.+|+.|++.|+.
T Consensus 221 -~~~iv~~H~p~~~~~~~~~-~~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~-------~~~g~~~i~~~~~ 286 (322)
T 2nxf_A 221 -ERVLIFSHLPVHPCAADPI-CLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCT-------DSSGAQHITLEGV 286 (322)
T ss_dssp -CEEEEEESSCCCTTSSCGG-GSCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEE-------CTTSCEEEECCCG
T ss_pred -CcEEEEEccCCCCCCCCcc-ccccCHHHHHHHHhcCCCeEEEEcCCcCCCCcee-------ccCCceEEEecch
Confidence 3689999999987643211 0111357888999999 79999999999999874 2457888876654
No 8
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=99.87 E-value=1e-20 Score=188.80 Aligned_cols=180 Identities=16% Similarity=0.233 Sum_probs=123.0
Q ss_pred eEEEEEecCCCCCC---------h----HHHHHHHHhC--CCCEEEEcCCcccccccccCCCCCccccccCCCCCCccch
Q 008663 209 SRIAIVGDVGLTYN---------T----TSTVSHMISN--RPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETY 273 (558)
Q Consensus 209 ~rfavigD~g~~~~---------~----~~~l~~l~~~--~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y 273 (558)
+||++++|+|.... . .++++.+.+. ++|+||++||+++. +.
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~------~~------------------ 56 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNC------GR------------------ 56 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSS------CC------------------
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCC------CC------------------
Confidence 58999999998741 1 2344455543 68999999999952 22
Q ss_pred hHHHHHHHHhhhhhhccCCceeecCCCccccCccchhhHhhhhcc-CCCCCCCCCCCceEEEEEeCeEEEEEEcCccc--
Q 008663 274 QPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRF-AFPSKESGSLSKFYYSFNAGGIHFLMLAAYVS-- 350 (558)
Q Consensus 274 ~~~wd~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f-~~P~~~~~~~~~~yYsf~~G~v~fI~LDt~~~-- 350 (558)
...|+.+.+.++.+ ++|+++++||||..... ...+...| ..+.+ .+..+|+++.++++||+||+...
T Consensus 57 ~~~~~~~~~~l~~l--~~p~~~v~GNHD~~~~~----~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~ld~~~~~~ 126 (274)
T 3d03_A 57 PEEYQVARQILGSL--NYPLYLIPGNHDDKALF----LEYLQPLCPQLGSD----ANNMRCAVDDFATRLLFIDSSRAGT 126 (274)
T ss_dssp HHHHHHHHHHHTTC--SSCEEEECCTTSCHHHH----HHHHGGGSGGGCSC----GGGCCEEECSSSSEEEECCCCCTTC
T ss_pred HHHHHHHHHHHHhc--CCCEEEECCCCCCHHHH----HHHhhhhhcCcccC----CCceEEEEEeCCEEEEEEeCCCCCC
Confidence 13455566666665 78999999999985211 01122211 11110 02467899999999999999743
Q ss_pred --CCCcHHHHHHHHHHHhhcccCCCCEEEEEeCCcccccCCCcccc-hHHHHHHHHHHHHHc-CCcEEEECcccCceee
Q 008663 351 --FDKSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYRE-AECMRVAMEDLLYKY-GVDVVFNGHVHAYERS 425 (558)
Q Consensus 351 --~~~~~~Q~~WL~~~L~~~~~~~~~wvIv~~H~P~y~s~~~~~~~-~~~~r~~l~~ll~~~-~VdlvlsGH~H~yeR~ 425 (558)
.....+|++||++.|++.. ..++|+++|+|++......... ....++.+.+++.++ +|+++|+||+|..+..
T Consensus 127 ~~~~~~~~~~~wl~~~l~~~~---~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~ 202 (274)
T 3d03_A 127 SKGWLTDETISWLEAQLFEGG---DKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMT 202 (274)
T ss_dssp SSBCCCHHHHHHHHHHHHHHT---TSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEE
T ss_pred CCCeeCHHHHHHHHHHHHhCC---CCCEEEEECCCCcccCCcccCcccCcCHHHHHHHHHhCCCceEEEeCCCCCchhh
Confidence 2346899999999999852 3469999999998753211110 011246788999999 8999999999998776
No 9
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=99.79 E-value=8.3e-18 Score=180.25 Aligned_cols=194 Identities=16% Similarity=0.241 Sum_probs=124.2
Q ss_pred CCeEEEEEecCCCCCC-----------------------hHH----HHHHHHhCCCCEEEEcCCcccccccccCCCCCcc
Q 008663 207 YPSRIAIVGDVGLTYN-----------------------TTS----TVSHMISNRPDLILLVGDVTYANLYLTNGTGSDC 259 (558)
Q Consensus 207 ~~~rfavigD~g~~~~-----------------------~~~----~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~~ 259 (558)
.++||++++|+|.... ... .++.+.+.+||+||++||+++. |.
T Consensus 38 ~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~------~~---- 107 (443)
T 2xmo_A 38 RNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNN------GE---- 107 (443)
T ss_dssp CCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSS------CC----
T ss_pred CCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCC------CC----
Confidence 3799999999997532 122 3334445689999999999952 22
Q ss_pred ccccCCCCCCccchhHHHHHHHHhhhhhh-ccCCceeecCCCccccCccc------------hhhHhhhhccCCCCC-C-
Q 008663 260 YACSFANSPIHETYQPRWDYWGRYMQPVL-SKVPIMVVEGNHEYEEQAEN------------RTFVAYTSRFAFPSK-E- 324 (558)
Q Consensus 260 ~~~~~~~~~~~e~Y~~~wd~~~~~l~~l~-~~~P~~~v~GNHD~~~~~~~------------~~~~~y~~~f~~P~~-~- 324 (558)
...++.+.+.++.+. ..+|+++++||||....... .....|.+.|.-..- .
T Consensus 108 --------------~~~~~~~~~~l~~l~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (443)
T 2xmo_A 108 --------------KTSHEELAKKLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDA 173 (443)
T ss_dssp --------------HHHHHHHHHHHHHHHHTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHHHHHHTCCCCCTTC
T ss_pred --------------HHHHHHHHHHHHHHHhCCCeEEEECCcCCCCCccccccCCcccccccccCHHHHHHHhhhcChhhh
Confidence 123344455555553 37899999999998642110 011233333321110 0
Q ss_pred -C-CCCCceEEEEEeCeEEEEEEcCccc------------CCCcHHHHHHHHHHHhhcccCCCCEEEEEeCCcccccCCC
Q 008663 325 -S-GSLSKFYYSFNAGGIHFLMLAAYVS------------FDKSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKA 390 (558)
Q Consensus 325 -~-~~~~~~yYsf~~G~v~fI~LDt~~~------------~~~~~~Q~~WL~~~L~~~~~~~~~wvIv~~H~P~y~s~~~ 390 (558)
. ......|+.+..++++||+||+... .....+|++||++.|+++.+.. ..+|+++|+|++.....
T Consensus 174 ~~~~~~~~~y~~~~~~~~~~i~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~~~-~~~Iv~~H~p~~~~~~~ 252 (443)
T 2xmo_A 174 ISSDEFSLSYLAAPSSKVWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKNG-AKLIPVLHHNLTDHNDV 252 (443)
T ss_dssp SEECSSSSCEEECSBSSEEEEECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHHTT-CEEEEECSSBSSCSSCC
T ss_pred hccCCCCceEEEecCCCEEEEEeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHHcC-CeEEEEECCCCcccccc
Confidence 0 0112234445578999999999742 2246899999999999875433 45899999999865321
Q ss_pred cccc-hHHHHHHHHHHHHHcCCcEEEECcccCceee
Q 008663 391 HYRE-AECMRVAMEDLLYKYGVDVVFNGHVHAYERS 425 (558)
Q Consensus 391 ~~~~-~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~ 425 (558)
.... ....++.+.+++.+++|+++|+||+|.....
T Consensus 253 ~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~~~ 288 (443)
T 2xmo_A 253 IQKGYTINYNQQVIDALTEGAMDFSLSGHIHTQNIR 288 (443)
T ss_dssp --CCSBCTTHHHHHHHHHHTTCCEEEECSSCSCEEE
T ss_pred cccccccccHHHHHHHHHHcCCeEEEECCcccCchh
Confidence 1100 0113577889999999999999999998765
No 10
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=99.47 E-value=3.8e-13 Score=132.95 Aligned_cols=218 Identities=11% Similarity=0.174 Sum_probs=108.6
Q ss_pred CeEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCccccccCCCCCCccchhHH----HHHHHH
Q 008663 208 PSRIAIVGDVGLTYNT-TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPR----WDYWGR 282 (558)
Q Consensus 208 ~~rfavigD~g~~~~~-~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y~~~----wd~~~~ 282 (558)
++||+++||+|..... .+.++.+.+.++|+||++||++....... .....+..... |..+.|+.. .+.+.+
T Consensus 5 ~mri~~iSDlH~~~~~~~~~l~~~~~~~~D~vi~~GDl~~~~~~~~-~~~~~~~~~~~---p~~~~~~~~~~~~~~~~~~ 80 (260)
T 2yvt_A 5 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEK-EYERAHLARRE---PNRKVIHENEHYIIETLDK 80 (260)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCHHHHH-HHHHHHHTTCC---CCTHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeecCCChHHHHHHHHHHHhcCCCEEEECCCCCCccCcch-hhhhhhhhhcc---cchhhhhHHHHHHHHHHHH
Confidence 5899999999987543 34556665679999999999985310000 00000000000 000111110 022334
Q ss_pred hhhhhhc-cCCceeecCCCccccCccchhhHhhhhccC-CCCCCCCCCCceEEEEEeCeEEEEEEcCcccC-CCcHHHHH
Q 008663 283 YMQPVLS-KVPIMVVEGNHEYEEQAENRTFVAYTSRFA-FPSKESGSLSKFYYSFNAGGIHFLMLAAYVSF-DKSGDQYK 359 (558)
Q Consensus 283 ~l~~l~~-~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~-~P~~~~~~~~~~yYsf~~G~v~fI~LDt~~~~-~~~~~Q~~ 359 (558)
+++.+.. ..|+++++||||..... .+........ .|... ... ....+++++++|+.++..... ....+|+.
T Consensus 81 ~l~~l~~~~~pv~~v~GNHD~~~~~---~~~~~~~~~~~~~~~~--~l~-~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~ 154 (260)
T 2yvt_A 81 FFREIGELGVKTFVVPGKNDAPLKI---FLRAAYEAETAYPNIR--VLH-EGFAGWRGEFEVIGFGGLLTEHEFEEDFVL 154 (260)
T ss_dssp HHHHHHTTCSEEEEECCTTSCCHHH---HHHHHHHTTTTCTTEE--ECS-SEEEEETTTEEEEEECSEEESSCCBSSSSC
T ss_pred HHHHHHhcCCcEEEEcCCCCchhhh---hHHHHhhhccCCcceE--Eec-CcceEEECCEEEEecCCCcCCCCcCHHHHh
Confidence 4444432 68999999999985211 0111111110 01000 000 112377889999999853211 11112221
Q ss_pred ----HHH----HHHhhcccCCCCEEEEEeCCcccccCCCcc--cchHHHHHHHHHHHHHcCCcEEEECcccCceeeeecc
Q 008663 360 ----WLE----EDLANVEREVTPWLVATWHAPWYSTYKAHY--REAECMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVY 429 (558)
Q Consensus 360 ----WL~----~~L~~~~~~~~~wvIv~~H~P~y~s~~~~~--~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~v~ 429 (558)
|+. +.|++.. ....|++.|+|++....... .......+.+.+++.+++++++++||+| .....
T Consensus 155 ~~~~~~~~~~l~~l~~~~---~~~~Il~~H~pp~~~~~d~~~~~~~~~~~~~l~~~~~~~~~~~vl~GH~H-~~~~~--- 227 (260)
T 2yvt_A 155 KYPRWYVEYILKFVNELK---PRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVG-KGHEL--- 227 (260)
T ss_dssp EEEHHHHHHHGGGGGGSC---CCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSC-CEEEE---
T ss_pred hcchhhHHHHHHHHHhcC---CCCEEEEECCCccccccccCcccccccCcHHHHHHHHHhCCCEEEECCcc-CCcEE---
Confidence 443 3333322 23468889999874311100 0000012456678888999999999999 32221
Q ss_pred CCccCCCCcEEEEeCCCc
Q 008663 430 NYTLDPCGPVHITVGDGG 447 (558)
Q Consensus 430 ~~~~~~~g~vyiv~G~gG 447 (558)
-++++++..|+.+
T Consensus 228 -----~~~~~~in~Gs~~ 240 (260)
T 2yvt_A 228 -----VGNTIVVNPGEFE 240 (260)
T ss_dssp -----ETTEEEEECCBGG
T ss_pred -----eCCEEEEeCCCCC
Confidence 1355566556543
No 11
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=99.46 E-value=4.7e-13 Score=129.11 Aligned_cols=191 Identities=10% Similarity=0.000 Sum_probs=105.2
Q ss_pred CeEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCccccccCCCCCCccchhHHHHHHHHhhhh
Q 008663 208 PSRIAIVGDVGLTYNT-TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQP 286 (558)
Q Consensus 208 ~~rfavigD~g~~~~~-~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y~~~wd~~~~~l~~ 286 (558)
++||+++||+|..... ...++.+.+.++|+||++||+++. +.. ...+..+.+.++.
T Consensus 5 ~mri~~iSD~H~~~~~~~~~~~~~~~~~~D~vi~~GDl~~~------~~~-----------------~~~~~~~~~~l~~ 61 (228)
T 1uf3_A 5 VRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPK------AAK-----------------SRDYAAFFRILSE 61 (228)
T ss_dssp CCEEEEEECCTTCHHHHHHHHTHHHHHTCSEEEEESCSSCT------TCC-----------------HHHHHHHHHHHGG
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHhhcCCCEEEECCCCCCC------CCC-----------------HHHHHHHHHHHHh
Confidence 5799999999986432 223344444589999999999852 210 1122333344443
Q ss_pred hhccCCceeecCCCccccCccchhhH-hhhhccCCCCCCCCCCCceEEEEEeC-eEEEEEEcCcc--cCCCc--------
Q 008663 287 VLSKVPIMVVEGNHEYEEQAENRTFV-AYTSRFAFPSKESGSLSKFYYSFNAG-GIHFLMLAAYV--SFDKS-------- 354 (558)
Q Consensus 287 l~~~~P~~~v~GNHD~~~~~~~~~~~-~y~~~f~~P~~~~~~~~~~yYsf~~G-~v~fI~LDt~~--~~~~~-------- 354 (558)
+ ..|+++++||||.... ..+. .+......|... ..... .+.++ +++|+.++... .+...
T Consensus 62 ~--~~pv~~v~GNHD~~~~---~~~~~~~~~~~~~~~~~--~l~~~--~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~ 132 (228)
T 1uf3_A 62 A--HLPTAYVPGPQDAPIW---EYLREAANVELVHPEMR--NVHET--FTFWRGPYLVAGVGGEIADEGEPEEHEALRYP 132 (228)
T ss_dssp G--CSCEEEECCTTSCSHH---HHHHHHHHHHHHCTTEE--ECBTS--EEEETTTEEEEEECSEEESSSCCBSSSSCEEE
T ss_pred c--CCcEEEECCCCCchhH---HHHHhhhhhhccCcceE--Ecccc--eEeeCCCcEEecCCCCcCCCCccChhhcccch
Confidence 3 6799999999998531 1111 110000011100 00011 24455 78999887532 11111
Q ss_pred HHHHHHHHHHHhhcccCCCCEEEEEeCCcccccCCCcccchHHHHHHHHHHHHHcCCcEEEECcccCceeeeeccCCccC
Q 008663 355 GDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYTLD 434 (558)
Q Consensus 355 ~~Q~~WL~~~L~~~~~~~~~wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~v~~~~~~ 434 (558)
..+.+|+++.|++.. ..+.|++.|+|++....... . ...+.+++.+++++++++||+| .... .
T Consensus 133 ~~~~~~~~~~l~~~~---~~~~il~~H~p~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~GH~H-~~~~--------~ 195 (228)
T 1uf3_A 133 AWVAEYRLKALWELK---DYPKIFLFHTMPYHKGLNEQ-G----SHEVAHLIKTHNPLLVLVAGKG-QKHE--------M 195 (228)
T ss_dssp HHHHHHHHGGGGGSC---SCCEEEEESSCBCBTTTBTT-S----BHHHHHHHHHHCCSEEEECCSS-CEEE--------E
T ss_pred hhhHHHHHHHHHhCC---CCCeEEEEccCcccCCcccc-C----HHHHHHHHHHhCCCEEEEcccc-cCcc--------c
Confidence 223344455555543 22589999999876421111 1 1356677888899999999999 2221 1
Q ss_pred CCCcEEEEeCCCc
Q 008663 435 PCGPVHITVGDGG 447 (558)
Q Consensus 435 ~~g~vyiv~G~gG 447 (558)
.+++.++..|+.+
T Consensus 196 ~~~~~~in~Gs~~ 208 (228)
T 1uf3_A 196 LGASWVVVPGDLS 208 (228)
T ss_dssp ETTEEEEECCBGG
T ss_pred cCCceEEEecccC
Confidence 2455666656543
No 12
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=99.43 E-value=3.9e-13 Score=138.71 Aligned_cols=188 Identities=16% Similarity=0.130 Sum_probs=98.4
Q ss_pred CeEEEEEecCCCC----CC---------hHH----HHHHHHhCCCCEEEEcCC-cccccccccCCCCCccccccCCCCCC
Q 008663 208 PSRIAIVGDVGLT----YN---------TTS----TVSHMISNRPDLILLVGD-VTYANLYLTNGTGSDCYACSFANSPI 269 (558)
Q Consensus 208 ~~rfavigD~g~~----~~---------~~~----~l~~l~~~~pDfvl~~GD-l~Y~d~~~~~G~~~~~~~~~~~~~~~ 269 (558)
.+||++++|+|.+ .. ... .++.+.+.++|+||++|| ++.. +. +.
T Consensus 18 ~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~------~~------------~~ 79 (336)
T 2q8u_A 18 ELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSR------NN------------PS 79 (336)
T ss_dssp EEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCS------SC------------CC
T ss_pred ceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCCEEEECCccccCC------CC------------CC
Confidence 6999999999966 21 022 334444578999999999 6531 11 10
Q ss_pred ccchhHHHHHHHHhhhhhhccCCceeecCCCccccCccchhhHhhhhccC----CCCCCCCCCCceEEEEEeCeEEEEEE
Q 008663 270 HETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFA----FPSKESGSLSKFYYSFNAGGIHFLML 345 (558)
Q Consensus 270 ~e~Y~~~wd~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~----~P~~~~~~~~~~yYsf~~G~v~fI~L 345 (558)
......+.++++.+...+|+++++||||... ...+..+..... +-.+. .....+.++.+++.|+.+
T Consensus 80 ----~~~~~~~~~~l~~L~~~~pv~~i~GNHD~~~---~~~~~~~l~~~g~nv~v~~~~---~~~~~~~~~~~~v~i~gl 149 (336)
T 2q8u_A 80 ----VVALHDLLDYLKRMMRTAPVVVLPGNHDWKG---LKLFGNFVTSISSDITFVMSF---EPVDVEAKRGQKVRILPF 149 (336)
T ss_dssp ----HHHHHHHHHHHHHHHHHSCEEECCC---------CHHHHHHHHHHCSSEEECCSS---SCEEEECTTSCEEEEEEE
T ss_pred ----HHHHHHHHHHHHHHHhcCCEEEECCCCCccc---cccHHHHHHhcCCEEEEEecc---cccCceEEeCCCEEEEEC
Confidence 1112344555666543389999999999864 122222222111 11100 000011223467888888
Q ss_pred cCcccC-------CCcHHHHHHHHHHHhhcccCCCCEEEEEeCCcccccCCCcccchHHH-HHHHHHHHHHcCCcEEEEC
Q 008663 346 AAYVSF-------DKSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECM-RVAMEDLLYKYGVDVVFNG 417 (558)
Q Consensus 346 Dt~~~~-------~~~~~Q~~WL~~~L~~~~~~~~~wvIv~~H~P~y~s~~~~~~~~~~~-r~~l~~ll~~~~VdlvlsG 417 (558)
+..... ....+|++|+.+.|.+.-+....+.|++.|.|++...... .+ ..+ ...+...+.+.++|++++|
T Consensus 150 p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Ill~H~~~~~~~~~~-~~-~~~~~~~v~~~l~~~~~d~v~~G 227 (336)
T 2q8u_A 150 PYPDESEALRKNEGDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYA-GI-EQGREIIINRALIPSVVDYAALG 227 (336)
T ss_dssp CCC-------CCSSHHHHHHHHHHHHHHHHHHTCSSEEEEEEESEETTCC----------CCCEECGGGSCTTSSEEEEE
T ss_pred CCCCHHHHHHHhhHHHHHHHHHHHHHHHHhccCCCCCEEEEECccccCCCCCC-Cc-cchhhcccCHHHccccCCEEEEc
Confidence 643221 1134678999888875310124579999999987532110 00 000 0001112334689999999
Q ss_pred cccCceee
Q 008663 418 HVHAYERS 425 (558)
Q Consensus 418 H~H~yeR~ 425 (558)
|+|..+..
T Consensus 228 H~H~~~~~ 235 (336)
T 2q8u_A 228 HIHSFREI 235 (336)
T ss_dssp SCSSCEEE
T ss_pred cccCceEe
Confidence 99998776
No 13
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=99.22 E-value=2.4e-10 Score=110.37 Aligned_cols=143 Identities=14% Similarity=0.319 Sum_probs=84.7
Q ss_pred CeEEEEEecCCCCCC---hHHHHHHH-HhCCCCEEEEcCCcccccccccCCCCCccccccCCCCCCccchhHHHHHHHHh
Q 008663 208 PSRIAIVGDVGLTYN---TTSTVSHM-ISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRY 283 (558)
Q Consensus 208 ~~rfavigD~g~~~~---~~~~l~~l-~~~~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y~~~wd~~~~~ 283 (558)
.+||+++||+|.... ..+.+.++ .+.++|+|+++||++.. ...+.
T Consensus 25 ~m~i~~iSD~H~~~~~~~l~~~l~~~~~~~~~D~vi~~GDl~~~-------------------------------~~l~~ 73 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCSQ-------------------------------EYVEM 73 (215)
T ss_dssp CEEEEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCCH-------------------------------HHHHH
T ss_pred CcEEEEEecCCCCCChHHHHHHHHHHHhcCCCCEEEECCCCCCH-------------------------------HHHHH
Confidence 479999999997642 22344444 34689999999999831 11223
Q ss_pred hhhhhccCCceeecCCCccccCccchhhHhhhhccCCCCCCCCCCCceEEEEEeCeEEEEEEcCcccCCCcHHHHHHHHH
Q 008663 284 MQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVSFDKSGDQYKWLEE 363 (558)
Q Consensus 284 l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~LDt~~~~~~~~~Q~~WL~~ 363 (558)
++.+ ..|+++|+||||....... ..+.. .+| ....+
T Consensus 74 l~~~--~~~v~~V~GNHD~~~~~~~---~~~~~--~lp---------~~~~~---------------------------- 109 (215)
T 2a22_A 74 LKNI--TKNVYIVSGDLDSAIFNPD---PESNG--VFP---------EYVVV---------------------------- 109 (215)
T ss_dssp HHHH--CSCEEECCCTTCCSCCBCC---GGGTB--CCC---------SEEEE----------------------------
T ss_pred HHHc--CCCEEEecCCCcCcccccC---hhhHh--hCC---------ceEEE----------------------------
Confidence 4443 4689999999998532100 00000 000 00000
Q ss_pred HHhhcccCCCCEEEEEeCCcccccCCCcccchHHHHHHHHHHHHHcCCcEEEECcccCceeeeeccCCccCCCCcEEEEe
Q 008663 364 DLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYTLDPCGPVHITV 443 (558)
Q Consensus 364 ~L~~~~~~~~~wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~v~~~~~~~~g~vyiv~ 443 (558)
. ...+.|++.|.+.+.... . .+.+..++.+.++|++++||+|...... .+++.+|..
T Consensus 110 -----~--~~~~~i~l~Hg~~~~~~~----~----~~~l~~~~~~~~~d~vl~GHtH~~~~~~--------~~~~~~inp 166 (215)
T 2a22_A 110 -----Q--IGEFKIGLMHGNQVLPWD----D----PGSLEQWQRRLDCDILVTGHTHKLRVFE--------KNGKLFLNP 166 (215)
T ss_dssp -----E--ETTEEEEEECSTTSSSTT----C----HHHHHHHHHHHTCSEEEECSSCCCEEEE--------ETTEEEEEC
T ss_pred -----e--cCCeEEEEEcCCccCCCC----C----HHHHHHHHhhcCCCEEEECCcCCCccEe--------eCCEEEEEC
Confidence 0 012478888855443211 1 2355667777899999999999865431 256778877
Q ss_pred CCCcc
Q 008663 444 GDGGN 448 (558)
Q Consensus 444 G~gG~ 448 (558)
|+.+.
T Consensus 167 GS~~~ 171 (215)
T 2a22_A 167 GTATG 171 (215)
T ss_dssp CCSSC
T ss_pred Ccccc
Confidence 77654
No 14
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=99.22 E-value=8.1e-10 Score=104.55 Aligned_cols=134 Identities=14% Similarity=0.283 Sum_probs=83.0
Q ss_pred CeEEEEEecCCCCCC---hHHHHHHHH-hCCCCEEEEcCCcccccccccCCCCCccccccCCCCCCccchhHHHHHHHHh
Q 008663 208 PSRIAIVGDVGLTYN---TTSTVSHMI-SNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRY 283 (558)
Q Consensus 208 ~~rfavigD~g~~~~---~~~~l~~l~-~~~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y~~~wd~~~~~ 283 (558)
.+||+++||+|.... ..+.+.++. +.++|+|+++||++.. ...+.
T Consensus 10 mm~i~~iSD~H~~~~~~~~~~~l~~~~~~~~~d~ii~~GDl~~~-------------------------------~~~~~ 58 (192)
T 1z2w_A 10 RMLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTK-------------------------------ESYDY 58 (192)
T ss_dssp -CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBSH-------------------------------HHHHH
T ss_pred ceEEEEEecCCCCccchhHHHHHHHHhccCCCCEEEEcCCCCCH-------------------------------HHHHH
Confidence 379999999997532 223343333 3579999999999831 11223
Q ss_pred hhhhhccCCceeecCCCccccCccchhhHhhhhccCCCCCCCCCCCceEEEEEeCeEEEEEEcCcccCCCcHHHHHHHHH
Q 008663 284 MQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVSFDKSGDQYKWLEE 363 (558)
Q Consensus 284 l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~LDt~~~~~~~~~Q~~WL~~ 363 (558)
++.+ ..|+++++||||... .+|. ...++.
T Consensus 59 l~~~--~~~~~~v~GNhD~~~--------------~lp~---------~~~~~~-------------------------- 87 (192)
T 1z2w_A 59 LKTL--AGDVHIVRGDFDENL--------------NYPE---------QKVVTV-------------------------- 87 (192)
T ss_dssp HHHH--CSEEEECCCTTCCCT--------------TSCS---------EEEEEE--------------------------
T ss_pred HHhc--CCCEEEEcCCcCccc--------------cCCc---------ceEEEE--------------------------
Confidence 3333 358999999999852 1221 111111
Q ss_pred HHhhcccCCCCEEEEEeCCcccccCCCcccchHHHHHHHHHHHHHcCCcEEEECcccCceeeeeccCCccCCCCcEEEEe
Q 008663 364 DLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYTLDPCGPVHITV 443 (558)
Q Consensus 364 ~L~~~~~~~~~wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~v~~~~~~~~g~vyiv~ 443 (558)
..+.|++.|.+.+.... . .+.+..++.+.+++++++||+|...... .+++.+|..
T Consensus 88 ---------~~~~i~l~Hg~~~~~~~----~----~~~l~~~~~~~~~d~vi~GHtH~~~~~~--------~~~~~~inp 142 (192)
T 1z2w_A 88 ---------GQFKIGLIHGHQVIPWG----D----MASLALLQRQFDVDILISGHTHKFEAFE--------HENKFYINP 142 (192)
T ss_dssp ---------TTEEEEEECSCCCCBTT----C----HHHHHHHHHHHSSSEEECCSSCCCEEEE--------ETTEEEEEC
T ss_pred ---------CCEEEEEECCCcCCCCC----C----HHHHHHHHHhcCCCEEEECCcCcCccEe--------ECCEEEEEC
Confidence 12578888855443211 1 2345567777899999999999865432 257788887
Q ss_pred CCCcc
Q 008663 444 GDGGN 448 (558)
Q Consensus 444 G~gG~ 448 (558)
|+.+.
T Consensus 143 GS~~~ 147 (192)
T 1z2w_A 143 GSATG 147 (192)
T ss_dssp CCTTC
T ss_pred Ccccc
Confidence 77654
No 15
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=99.18 E-value=2.4e-10 Score=115.05 Aligned_cols=195 Identities=13% Similarity=0.076 Sum_probs=106.2
Q ss_pred CeEEEEEecCCCCCChHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCccccccCCCCCCccchhHHHHHHHHhhhhh
Q 008663 208 PSRIAIVGDVGLTYNTTSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPV 287 (558)
Q Consensus 208 ~~rfavigD~g~~~~~~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y~~~wd~~~~~l~~l 287 (558)
.+||+++||+|...... .-.++|+||++||++.. |. ......+.++++.+
T Consensus 59 ~mri~~iSD~H~~~~~l------~i~~~D~vi~aGDl~~~------g~------------------~~e~~~~~~~L~~l 108 (296)
T 3rl5_A 59 HTRFVCISDTRSRTDGI------QMPYGDILLHTGDFTEL------GL------------------PSEVKKFNDWLGNL 108 (296)
T ss_dssp EEEEEEEBCCTTCCTTC------CCCSCSEEEECSCCSSS------CC------------------HHHHHHHHHHHHTS
T ss_pred CeEEEEEeeCCCCcchh------ccCCCCEEEECCcccCC------CC------------------HHHHHHHHHHHHhC
Confidence 58999999999875321 12478999999999952 22 12233444555554
Q ss_pred hccCCceeecCCCccccCccchhhHhhhh----cc----CCCC----CCCCCCCceE----EEEEeCeEEEEEEcCcccC
Q 008663 288 LSKVPIMVVEGNHEYEEQAENRTFVAYTS----RF----AFPS----KESGSLSKFY----YSFNAGGIHFLMLAAYVSF 351 (558)
Q Consensus 288 ~~~~P~~~v~GNHD~~~~~~~~~~~~y~~----~f----~~P~----~~~~~~~~~y----Ysf~~G~v~fI~LDt~~~~ 351 (558)
. ..++++++||||...+.. .+..... ++ ..+. +...-..+.. -+..+++++|+...-...+
T Consensus 109 ~-~~~v~~V~GNHD~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~~~~i~Gl~i~Gsp~tP~~ 185 (296)
T 3rl5_A 109 P-YEYKIVIAGNHELTFDKE--FMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVKGFRIYGAPWTPWF 185 (296)
T ss_dssp C-CSEEEECCCTTCGGGCHH--HHHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSSEEEEETTEEEEEECCBCC-
T ss_pred C-CCeEEEEcCCcccccchh--hhhhhhcccccccccccccccchhhhHhhhcCCeEEecCCcEEECCEEEEEecCCCCC
Confidence 2 245899999999964321 1110000 00 0000 0000001111 1456778998885432211
Q ss_pred CC---cHHHHHHHHHHHhhcccCCCCEEEEEeCCcccccCCCc-----ccchHHHHHHHHHHH-HHcCCcEEEECcccCc
Q 008663 352 DK---SGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAH-----YREAECMRVAMEDLL-YKYGVDVVFNGHVHAY 422 (558)
Q Consensus 352 ~~---~~~Q~~WL~~~L~~~~~~~~~wvIv~~H~P~y~s~~~~-----~~~~~~~r~~l~~ll-~~~~VdlvlsGH~H~y 422 (558)
.. ..++.+++.+.+.+..+ ...|++.|.|++...... .... +.+.+.+ .+++.+++++||+|..
T Consensus 186 ~~~~f~~~~~~~~~~~~~~ip~---~~dILvTH~PP~g~~D~~~~~~~~~G~----~~L~~~i~~~~~p~l~v~GH~H~~ 258 (296)
T 3rl5_A 186 NGWGFNLPRGQSLLDKWNLIPE---GTDILMTHGPPLGFRDWVPKELQRVGC----VELLNTVQRRVRPKLHVFGGIHEG 258 (296)
T ss_dssp -CCTTBCCTTHHHHHHHTTSCT---TCSEEEESSCBTTSSCEEGGGTEECSB----HHHHHHHHHTTCCSEEEECSCGGG
T ss_pred CCcCCCcchHHHHHHHHhhCCC---CCeEEEECCCccccccccccccCcCCh----HHHHHHHHHhcCCCEEEECCccCC
Confidence 11 11222244333344322 236899999998763211 1112 3344555 5889999999999975
Q ss_pred eeeeeccCCccCCCCcEEEEeCCCccc
Q 008663 423 ERSNRVYNYTLDPCGPVHITVGDGGNR 449 (558)
Q Consensus 423 eR~~~v~~~~~~~~g~vyiv~G~gG~~ 449 (558)
.... ..+++.+|..|+-|..
T Consensus 259 ~~~~-------~~g~t~vvNpGs~~~~ 278 (296)
T 3rl5_A 259 YGTM-------TDGYTTYINASTCTVS 278 (296)
T ss_dssp CEEE-------ECSSCEEEECBCSCTT
T ss_pred CceE-------EECCEEEEECCcCCcC
Confidence 4322 1357888888887663
No 16
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=99.17 E-value=8.2e-10 Score=102.96 Aligned_cols=58 Identities=9% Similarity=0.035 Sum_probs=40.8
Q ss_pred EEEEEeCCcccccCCCcccchHHHHHHHHHHHHHcCCcEEEECcccCceeeeeccCCccCCCCcEEEEeCCCcc
Q 008663 375 WLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYTLDPCGPVHITVGDGGN 448 (558)
Q Consensus 375 wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~v~~~~~~~~g~vyiv~G~gG~ 448 (558)
+.|++.|.|++.... . .+.+.+++.+++++++++||+|...... .+++.+|..|+.|.
T Consensus 78 ~~i~~~Hg~~~~~~~----~----~~~l~~~~~~~~~d~vi~GHtH~~~~~~--------~~~~~~inpGs~~~ 135 (176)
T 3ck2_A 78 TKIIQTHGHLFDINF----N----FQKLDYWAQEEEAAICLYGHLHVPSAWL--------EGKILFLNPGSISQ 135 (176)
T ss_dssp EEEEEECSGGGTTTT----C----SHHHHHHHHHTTCSEEECCSSCCEEEEE--------ETTEEEEEECCSSS
T ss_pred eEEEEECCCccCCCC----C----HHHHHHHHHhcCCCEEEECCcCCCCcEE--------ECCEEEEECCCCCc
Confidence 478888988765321 1 1345677788999999999999875542 25677887777654
No 17
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=99.16 E-value=4.8e-11 Score=117.56 Aligned_cols=186 Identities=8% Similarity=0.008 Sum_probs=99.3
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHH---hC--CCCEEEEcCCcccccccccCCCCCccccccCCCCCCccchhHHHHHHHH
Q 008663 209 SRIAIVGDVGLTYNT-TSTVSHMI---SN--RPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGR 282 (558)
Q Consensus 209 ~rfavigD~g~~~~~-~~~l~~l~---~~--~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y~~~wd~~~~ 282 (558)
+||+++||+|..... ...++.+. .. ++|+|+++||++.. |.. . ....+
T Consensus 2 m~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~------g~~------------------~--~~~~~ 55 (252)
T 1nnw_A 2 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGL------FPY------------------P--KEVIE 55 (252)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSS------SSC------------------H--HHHHH
T ss_pred cEEEEEeecCCCHHHHHHHHHHHHhhhhccCCCCEEEEeCccCCC------CCC------------------H--HHHHH
Confidence 589999999975322 24455555 55 78999999999842 210 0 11223
Q ss_pred hhhhhhccCCceeecCCCccccCccchhhHhhhhccCCCCCCCCCCCceEEEEEeCeEEEEEEcC--cccCCCcHHHHHH
Q 008663 283 YMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAA--YVSFDKSGDQYKW 360 (558)
Q Consensus 283 ~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~LDt--~~~~~~~~~Q~~W 360 (558)
.+..+....|+++++||||.... .+...+. .. ... ..++..... ... ........+|++|
T Consensus 56 ~l~~l~~~~~~~~v~GNhD~~~~-------~~~~~~~-~~------~~~-~~~~~~~~~---~~~~~~~~~~l~~~~~~~ 117 (252)
T 1nnw_A 56 VIKDLTKKENVKIIRGKYDQIIA-------MSDPHAT-DP------GYI-DKLELPGHV---KKALKFTWEKLGHEGREY 117 (252)
T ss_dssp HHHHHHHHSCEEEECCHHHHHHH-------HSCTTCS-SS------GGG-GGSSCCHHH---HHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHhhcCeeEEecchHHHhh-------ccccccC-Cc------ccc-cchhhhHHH---HHHHHHHHHHCCHHHHHH
Confidence 34444333689999999997411 0111110 00 000 000000000 000 0000124678889
Q ss_pred HHHHHhhcccCCCCEEEEEeCCcccccCC-CcccchHHHHHHHHHHHHHc-CCcEEEECcccCceeeeeccCCccCCCCc
Q 008663 361 LEEDLANVEREVTPWLVATWHAPWYSTYK-AHYREAECMRVAMEDLLYKY-GVDVVFNGHVHAYERSNRVYNYTLDPCGP 438 (558)
Q Consensus 361 L~~~L~~~~~~~~~wvIv~~H~P~y~s~~-~~~~~~~~~r~~l~~ll~~~-~VdlvlsGH~H~yeR~~~v~~~~~~~~g~ 438 (558)
|++.............|++.|++++.... ..... ...+.+.+++.++ +++++++||+|...... .+++
T Consensus 118 L~~lp~~~~~~~~~~~i~~~H~~p~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~--------~~~~ 187 (252)
T 1nnw_A 118 LRDLPIYLVDKIGGNEVFGVYGSPINPFDGEVLAE--QPTSYYEAIMRPVKDYEMLIVASPMYPVDAM--------TRYG 187 (252)
T ss_dssp HHTSCSCEEEEETTEEEEEESSCSSCTTTCCCCSS--CCHHHHHHHHGGGTTSSEEEESTTCSEEEEE--------ETTE
T ss_pred HHhCCceEEEeeCCcEEEEEcCCCCCCcccccCCC--CCHHHHHHHHhcCCCCCEEEECCccccceEe--------cCCe
Confidence 87643322211122367778877643211 11111 1124567788888 99999999999866542 2478
Q ss_pred EEEEeCCCcc
Q 008663 439 VHITVGDGGN 448 (558)
Q Consensus 439 vyiv~G~gG~ 448 (558)
.+|..|+.|.
T Consensus 188 ~~in~Gs~~~ 197 (252)
T 1nnw_A 188 RVVCPGSVGF 197 (252)
T ss_dssp EEEEECCSSS
T ss_pred EEEECCCccC
Confidence 8888888765
No 18
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=99.13 E-value=3.7e-10 Score=118.76 Aligned_cols=174 Identities=15% Similarity=0.119 Sum_probs=93.5
Q ss_pred CeEEEEEecCCCCCC--------------hHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCccccccCCCCCCccch
Q 008663 208 PSRIAIVGDVGLTYN--------------TTSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETY 273 (558)
Q Consensus 208 ~~rfavigD~g~~~~--------------~~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y 273 (558)
++||++++|+|.+.. ....++.+.+.++|+||++||++.. +. +.
T Consensus 20 ~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~------~~------------p~---- 77 (386)
T 3av0_A 20 HMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFND------LR------------PP---- 77 (386)
T ss_dssp CCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSS------SS------------CC----
T ss_pred CeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCC------CC------------CC----
Confidence 689999999998742 1223444456799999999999842 11 10
Q ss_pred hHHHHHHHHhhhhhhc-cCCceeecCCCccccCccch-hhHhhhhccCCCCCCCCCCCceEEEEEeCeEEEEEEcCcccC
Q 008663 274 QPRWDYWGRYMQPVLS-KVPIMVVEGNHEYEEQAENR-TFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVSF 351 (558)
Q Consensus 274 ~~~wd~~~~~l~~l~~-~~P~~~v~GNHD~~~~~~~~-~~~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~LDt~~~~ 351 (558)
...+..+.+.++.+.. ++|+++++||||........ ....+......-. ...++..+.+++.|+.++.....
T Consensus 78 ~~~~~~~~~~l~~L~~~~~pv~~v~GNHD~~~~~~~~~~~~~l~~~v~~l~------~~~v~~~~~~~v~i~gl~~~~~~ 151 (386)
T 3av0_A 78 VKALRIAMQAFKKLHENNIKVYIVAGNHEMPRRLGEESPLALLKDYVKILD------GKDVINVNGEEIFICGTYYHKKS 151 (386)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEECCCGGGSCSSTTSCCGGGGGTTTCEECS------EEEEEEETTEEEEEEEECCCCST
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEcCCCCCCccccccCHHHHHHHHeEEcC------CCcEEEeCCCCEEEEeCCCCCHH
Confidence 1123345556666543 58999999999986422110 0011111000000 11122122256888888865332
Q ss_pred CCcHHHHHHH---HHHHhhcccCCCCEEEEEeCCcccccCCCcccchHHHHHHHHHHHHHcCCcEEEECcccCcee
Q 008663 352 DKSGDQYKWL---EEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYER 424 (558)
Q Consensus 352 ~~~~~Q~~WL---~~~L~~~~~~~~~wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR 424 (558)
. .....+|| ...+. ...+.|++.|.|........+.. .+.. +. ++|++++||+|..++
T Consensus 152 ~-~~~~~~~l~~l~~~~~-----~~~~~Ill~H~~~~~~~~~~~~~------~~~~-l~--~~d~v~~GH~H~~~~ 212 (386)
T 3av0_A 152 K-REEMLDKLKNFESEAK-----NYKKKILMLHQGINPYIPLDYEL------EHFD-LP--KFSYYALGHIHKRIL 212 (386)
T ss_dssp T-HHHHHHHHHHHHHHHH-----TCSSEEEEECCCCTTTSSSSCSS------CGGG-SC--CCSEEEECSCCSCEE
T ss_pred H-HHHHHHHHHHhhhhcc-----cCCCEEEEECcCccccCCCCccc------CHHH-hh--hCCeEEccCCCCCcc
Confidence 1 12233333 32221 12358999999875421111110 0111 11 399999999998754
No 19
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=99.13 E-value=1.5e-10 Score=115.85 Aligned_cols=185 Identities=17% Similarity=0.153 Sum_probs=101.3
Q ss_pred CeEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCccccccCCCCCCccchhHHHHHHHHhhhh
Q 008663 208 PSRIAIVGDVGLTYNT-TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQP 286 (558)
Q Consensus 208 ~~rfavigD~g~~~~~-~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y~~~wd~~~~~l~~ 286 (558)
+.||+++||+|..... .++++.+.+.++|.|+++||++.. |.. .....+.++.
T Consensus 11 ~~~i~~iSDiHg~~~~l~~vl~~~~~~~~D~ii~~GDlv~~------g~~--------------------~~~~~~~l~~ 64 (270)
T 3qfm_A 11 MTKIALLSDIHGNTTALEAVLADARQLGVDEYWLLGDILMP------GTG--------------------RRRILDLLDQ 64 (270)
T ss_dssp CEEEEEECCCTTCHHHHHHHHHHHHHTTCCEEEECSCCSSS------SSC--------------------SHHHHHHHHT
T ss_pred ccEEEEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCC------CCC--------------------HHHHHHHHHc
Confidence 7899999999965322 234556666789999999999942 210 0122333333
Q ss_pred hhccCCceeecCCCccccCccchhhHhhhhccCCCCCCCCCCCceEEEEEeCeEEEEEEcCcccCCCcHHHHHHHHHHHh
Q 008663 287 VLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVSFDKSGDQYKWLEEDLA 366 (558)
Q Consensus 287 l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~LDt~~~~~~~~~Q~~WL~~~L~ 366 (558)
+ .|+++|.||||.... ......+.++.. ...+.+ . ...+.......+|++||++.-.
T Consensus 65 ~---~~~~~v~GNhD~~~~------~~~~~~~~~~~~-----~~~~~~----~-----~~~~~~~~L~~~~~~~L~~LP~ 121 (270)
T 3qfm_A 65 L---PITARVLGNWEDSLW------HGVRKELDSTRP-----SQRYLL----R-----QCQYVLEEISLEEIEVLHNQPL 121 (270)
T ss_dssp S---CEEEECCCHHHHHHH------HHHTTCSCTTSH-----HHHHHH----H-----HHHHHHTTSCHHHHHHHHSCCS
T ss_pred c---CCEEEEcCChHHHHH------HhhccccCCCcH-----HHHHHH----H-----HHHHHHHHcCHHHHHHHHhCCC
Confidence 3 378999999997421 000011100000 000000 0 0001112345788999886443
Q ss_pred hcccCCCCEEEEEeCCcccccCCCcccchHHHHHHHHHHHHHcCCcEEEECcccCceeeeeccCCccCCCCcEEEEeCCC
Q 008663 367 NVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYTLDPCGPVHITVGDG 446 (558)
Q Consensus 367 ~~~~~~~~wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~v~~~~~~~~g~vyiv~G~g 446 (558)
.....-....|++.|..+........ ......+.+..++.+.++|++|+||+|...... ..+|..+|..|+.
T Consensus 122 ~~~~~~~g~~i~lvHg~p~~~~~~~~-~~~~~~~~l~~~~~~~~~d~~i~GHtH~~~~~~-------~~~~~~~iNpGSv 193 (270)
T 3qfm_A 122 QIHRQFGDLTVGISHHLPDKNWGREL-IHTGKQEEFDRLVTHPPCDIAVYGHIHQQLLRY-------GTGGQLIVNPGSI 193 (270)
T ss_dssp EEEEEETTEEEEEESSBTTBSSSSTT-STTCCHHHHHHTTTTTTCSEEECCSSCSEEEEE-------CTTSCEEEEECCS
T ss_pred ceEEEECCcEEEEEECCCCCCCCcee-cCCCcHHHHHHHhcccCCCEEEECCcCchHhee-------ccCCEEEEECCCc
Confidence 32111122467777865443211100 001113456677777899999999999644331 1358889999998
Q ss_pred ccc
Q 008663 447 GNR 449 (558)
Q Consensus 447 G~~ 449 (558)
|..
T Consensus 194 g~p 196 (270)
T 3qfm_A 194 GQP 196 (270)
T ss_dssp SSC
T ss_pred cCC
Confidence 873
No 20
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=99.10 E-value=5.3e-10 Score=117.25 Aligned_cols=189 Identities=19% Similarity=0.240 Sum_probs=101.7
Q ss_pred eEEEEEecCCCCCC----h---------HHHHH----HHHhCCCCEEEEcCCcccccccccCCCCCccccccCCCCCCcc
Q 008663 209 SRIAIVGDVGLTYN----T---------TSTVS----HMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHE 271 (558)
Q Consensus 209 ~rfavigD~g~~~~----~---------~~~l~----~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e 271 (558)
+||++++|+|.+.. . ...++ .+.+.+||+||++||+++.. +. +.
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~-----~~------------~~-- 61 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSR-----NN------------PS-- 61 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCS-----SS------------CC--
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccC-----CC------------CC--
Confidence 58999999998754 1 12333 33456999999999998421 11 11
Q ss_pred chhHHHHHHHHhhhhhhccCCceeecCCCccccCccchhhHhhhhccCCCCCCCCCCCceEEEEE--eC-eEEEEEEcCc
Q 008663 272 TYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFN--AG-GIHFLMLAAY 348 (558)
Q Consensus 272 ~Y~~~wd~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~--~G-~v~fI~LDt~ 348 (558)
...+..+.+.++.+...+|+++++||||.... ..+..+... ++.+..-.....-+.+. .| .+.|+.+.-.
T Consensus 62 --~~~~~~~~~~l~~l~~~~~v~~i~GNHD~~~~---~~~~~~~~~--~~~~~~~~~~~~~v~l~~~~G~~v~i~glp~~ 134 (379)
T 3tho_B 62 --VVALHDLLDYLKRMMRTAPVVVLPGNQDWKGL---KLFGNFVTS--ISSDITFVMSFEPVDVEAKRGQKVRILPFPYP 134 (379)
T ss_dssp --HHHHHHHHHHHHHHHHHSCEEECCCTTSCTTH---HHHHHHHHT--TCSSEEECCSSCCEEEECTTCCEEEEEEECCC
T ss_pred --HHHHHHHHHHHHHHHhCCCEEEEcCCCccccC---ccccccccc--cCCcceeecccceEEEEcCCCCEEEEEECCCC
Confidence 12334455666666533999999999996421 112222211 11110000000112233 24 4777777532
Q ss_pred ccC----CCcHHHHHHHHHHHhhc---ccCCCCEEEEEeCCcccccCCCcccchHH-HHHHHHHHHHHcCCcEEEECccc
Q 008663 349 VSF----DKSGDQYKWLEEDLANV---EREVTPWLVATWHAPWYSTYKAHYREAEC-MRVAMEDLLYKYGVDVVFNGHVH 420 (558)
Q Consensus 349 ~~~----~~~~~Q~~WL~~~L~~~---~~~~~~wvIv~~H~P~y~s~~~~~~~~~~-~r~~l~~ll~~~~VdlvlsGH~H 420 (558)
... .....+.+|+.+.|++. ......+.|++.|.++..... +.+.+. +...+...+...++|+++.||.|
T Consensus 135 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~I~l~H~~v~g~~~--~~~se~~~~~~v~~~~~~~~~dyvalGH~H 212 (379)
T 3tho_B 135 DESEALRKNEGDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAG--YAGIEQGREIIINRALIPSVVDYAALGHIH 212 (379)
T ss_dssp CCC----CHHHHHHHHHHHHHHHHHHHHHTCSSEEEEEEESCBSCCCC---------CSCCBCGGGSCTTSSEEEEESCS
T ss_pred CHHHHhhhhccchHHHHHHHHHHHHHHhcCCCCCeEEEEeccccCCcc--CCCCccccccccCHHHcCcCCCEEEccccc
Confidence 211 12356789999988731 112345789999998764321 000000 00112122224589999999999
Q ss_pred Cceee
Q 008663 421 AYERS 425 (558)
Q Consensus 421 ~yeR~ 425 (558)
..+..
T Consensus 213 ~~q~~ 217 (379)
T 3tho_B 213 SFREI 217 (379)
T ss_dssp SCEEE
T ss_pred CCeEe
Confidence 98665
No 21
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=98.97 E-value=1.9e-09 Score=102.17 Aligned_cols=48 Identities=19% Similarity=0.286 Sum_probs=36.2
Q ss_pred EEEEEeCCcccccCCCcccchHHHHHHHHHHHHHcCCcEEEECcccCceee
Q 008663 375 WLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERS 425 (558)
Q Consensus 375 wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~ 425 (558)
+.|+++|+|++......+. ...+.+.+++.+++++++++||+|.....
T Consensus 107 ~~i~~~H~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~vi~GHtH~~~~~ 154 (195)
T 1xm7_A 107 KRILLSHYPAKDPITERYP---DRQEMVREIYFKENCDLLIHGHVHWNREG 154 (195)
T ss_dssp EEEEEESSCSSCSSCCSCH---HHHHHHHHHHHHTTCSEEEECCCCCCSCC
T ss_pred cEEEEEccCCcCCCccccc---chHHHHHHHHHHcCCcEEEECCcCCCCcc
Confidence 5799999998765433221 33578888999999999999999976543
No 22
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=98.93 E-value=5e-09 Score=99.06 Aligned_cols=140 Identities=16% Similarity=0.161 Sum_probs=84.2
Q ss_pred eEEEEEecCCCCCC-hHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCccccccCCCCCCccchhHHHHHHHHhhhhh
Q 008663 209 SRIAIVGDVGLTYN-TTSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPV 287 (558)
Q Consensus 209 ~rfavigD~g~~~~-~~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y~~~wd~~~~~l~~l 287 (558)
+||+++||+|.... ..+.++.+.+.++|+|+++||++.. ...+.++.+
T Consensus 26 m~i~~iSD~Hg~~~~l~~~l~~~~~~~~D~ii~~GDl~~~-------------------------------~~~~~l~~l 74 (190)
T 1s3l_A 26 MKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSL-------------------------------FVIKEFENL 74 (190)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCST-------------------------------HHHHHGGGC
T ss_pred eEEEEEeeCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCH-------------------------------HHHHHHHhc
Confidence 89999999995422 1234555556789999999999731 112334433
Q ss_pred hccCCceeecCCCccccCccchhhHhhhhccCCCCCCCCCCCceEEEEEeCeEEEEEEcCcccCCCcHHHHHHHHHHHhh
Q 008663 288 LSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVSFDKSGDQYKWLEEDLAN 367 (558)
Q Consensus 288 ~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~LDt~~~~~~~~~Q~~WL~~~L~~ 367 (558)
..|+++|+||||.... .+. .++ .|.. . . .+. ... ..
T Consensus 75 --~~~~~~V~GNhD~~~~----~~~---~~~-~~~~---~-~-~l~------------~~~-----------------~~ 110 (190)
T 1s3l_A 75 --NANIIATYGNNDGERC----KLK---EWL-KDIN---E-E-NII------------DDF-----------------IS 110 (190)
T ss_dssp --SSEEEEECCTTCCCHH----HHH---HHH-HHHC---T-T-CEE------------ESE-----------------EE
T ss_pred --CCCEEEEeCCCcchHH----HHH---HHh-cccC---h-h-hhc------------ccc-----------------eE
Confidence 5799999999998521 111 111 0000 0 0 000 000 00
Q ss_pred cccCCCCEEEEEeCCcccccCCCcccchHHHHHHHHHHHHHc-CCcEEEECcccCceeeeeccCCccCCCCcEEEEeCCC
Q 008663 368 VEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKY-GVDVVFNGHVHAYERSNRVYNYTLDPCGPVHITVGDG 446 (558)
Q Consensus 368 ~~~~~~~wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~-~VdlvlsGH~H~yeR~~~v~~~~~~~~g~vyiv~G~g 446 (558)
.. ...+.|++.|.|.+. +.+.+.+. ++|++++||+|..+... .+++.+|..|+.
T Consensus 111 ~~--~~~~~ill~Hg~~~~---------------l~~~~~~~~~~d~vl~GHtH~~~~~~--------~~~~~~iNpGs~ 165 (190)
T 1s3l_A 111 VE--IDDLKFFITHGHHQS---------------VLEMAIKSGLYDVVIYGHTHERVFEE--------VDDVLVINPGEC 165 (190)
T ss_dssp EE--ETTEEEEEEESCCHH---------------HHHHHHHHSCCSEEEEECSSCCEEEE--------ETTEEEEECCCS
T ss_pred Ee--eCCcEEEEECCChHH---------------HHHHHHhcCCCCEEEECCCCCcceEE--------ECCEEEEECCcc
Confidence 01 123578999988653 23445555 99999999999876542 257888888887
Q ss_pred cc
Q 008663 447 GN 448 (558)
Q Consensus 447 G~ 448 (558)
|.
T Consensus 166 ~~ 167 (190)
T 1s3l_A 166 CG 167 (190)
T ss_dssp SC
T ss_pred cc
Confidence 65
No 23
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=98.93 E-value=2.6e-08 Score=93.14 Aligned_cols=62 Identities=15% Similarity=0.182 Sum_probs=42.6
Q ss_pred CeEEEEEecCCCCCC---hHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCccccccCCCCCCccchhHHHHHHHHhh
Q 008663 208 PSRIAIVGDVGLTYN---TTSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYM 284 (558)
Q Consensus 208 ~~rfavigD~g~~~~---~~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y~~~wd~~~~~l 284 (558)
-+||+++||+|...+ ..+.++.+. .++|+|+++||++.. ...+.+
T Consensus 22 mmri~~iSD~Hg~~~~~~l~~~l~~~~-~~~D~ii~~GD~~~~-------------------------------~~~~~l 69 (178)
T 2kkn_A 22 VKRFLLISDSHVPVRMASLPDEILNSL-KEYDGVIGLGDYVDL-------------------------------DTVILL 69 (178)
T ss_dssp CEEEEEECCCCBTTTTCCCCHHHHHGG-GGCSEEEESSCBSCH-------------------------------HHHHHH
T ss_pred ceEEEEEecccCCCCHHHHHHHHHHHh-cCCCEEEECCCCCCH-------------------------------HHHHHH
Confidence 379999999995222 234455544 689999999999841 112233
Q ss_pred hhhhccCCceeecCCCccc
Q 008663 285 QPVLSKVPIMVVEGNHEYE 303 (558)
Q Consensus 285 ~~l~~~~P~~~v~GNHD~~ 303 (558)
+.+ ..|++.++||||..
T Consensus 70 ~~~--~~~v~~V~GNhD~~ 86 (178)
T 2kkn_A 70 EKF--SKEFYGVHGNMDYP 86 (178)
T ss_dssp HHH--TSSEEECCCSSSCG
T ss_pred Hhc--CCCEEEEECCCCcH
Confidence 333 36899999999974
No 24
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=98.87 E-value=5.6e-09 Score=102.63 Aligned_cols=152 Identities=19% Similarity=0.199 Sum_probs=81.9
Q ss_pred CeEEEEEecCCCCCChH-HHHHHHHhCCCCEEEEcCCcccccccccCCCCCccccccCCCCCCccchhHHHHHHHHhhhh
Q 008663 208 PSRIAIVGDVGLTYNTT-STVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQP 286 (558)
Q Consensus 208 ~~rfavigD~g~~~~~~-~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y~~~wd~~~~~l~~ 286 (558)
.+|++++||+|.....- ..++.+. ++|.++++||++.. |.. . ....+.+..
T Consensus 3 ~mri~~isDiHg~~~~l~~~l~~~~--~~d~ii~~GDl~~~------g~~------------------~--~~~~~~l~~ 54 (246)
T 3rqz_A 3 AMRILIISDVHANLVALEAVLSDAG--RVDDIWSLGDIVGY------GPR------------------P--RECVELVRV 54 (246)
T ss_dssp CCCEEEECCCTTCHHHHHHHHHHHC--SCSEEEECSCCSSS------SSC------------------H--HHHHHHHHH
T ss_pred CcEEEEEeecCCCHHHHHHHHHhcc--CCCEEEECCCcCCC------CCC------------------H--HHHHHHHHh
Confidence 57999999999543221 2233332 89999999999942 210 0 122233333
Q ss_pred hhccCCceeecCCCccccCccchhhHhhhhccCCCCCCCCCCCceEEEEEeCeEEEEEEcCcccCCCcHHHHHHHHHHHh
Q 008663 287 VLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVSFDKSGDQYKWLEEDLA 366 (558)
Q Consensus 287 l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~LDt~~~~~~~~~Q~~WL~~~L~ 366 (558)
+ ..++.+.||||.... ..+.... +...... .+ .........++++||++...
T Consensus 55 ~---~~~~~v~GNhD~~~~----------~~~~~~~------------~~~~~~~--~~-~~~~~~l~~~~~~~L~~lp~ 106 (246)
T 3rqz_A 55 L---APNISVIGNHDWACI----------GRLSLDE------------FNPVARF--AS-YWTTMQLQAEHLQYLESLPN 106 (246)
T ss_dssp H---CSSEECCCHHHHHHT----------CCCCCC--------------CGGGGC--HH-HHHHHHCCHHHHHHHHHCCS
T ss_pred c---CCCEEEeCchHHHHh----------ccCCccc------------cCHHHHH--HH-HHHHHHcCHHHHHHHHhCCc
Confidence 3 136999999997421 0010000 0000000 00 00001235788999986543
Q ss_pred hcccCCCCEEEEEeCCcccccCCCcccchHHHHHHHHHHHHHcCCcEEEECcccCce
Q 008663 367 NVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYE 423 (558)
Q Consensus 367 ~~~~~~~~wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ye 423 (558)
.... . .|++.|.++..... .+-. ....+.++|.+++++++|+||+|...
T Consensus 107 ~~~~-~---~i~~~Hg~p~~~~~-~~~~---~~~~~~~~l~~~~~~l~i~GHtH~p~ 155 (246)
T 3rqz_A 107 RMID-G---DWTVVHGSPRHPIW-EYIY---NARIAALNFPAFDTPLCFVGHTHVPL 155 (246)
T ss_dssp EEEE-T---TEEEESSCSSSTTT-CCCC---SHHHHHHHGGGCCSSEEECCSSSSEE
T ss_pred EEEE-C---CEEEEECCcCCccc-cccC---ChHHHHHHHhccCCCEEEECCcCccc
Confidence 3322 2 36677876654321 1111 12456678889999999999999643
No 25
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=98.82 E-value=3.6e-07 Score=96.61 Aligned_cols=41 Identities=24% Similarity=0.319 Sum_probs=31.2
Q ss_pred CCeEEEEEecCCCCCCh-------------HHHHHHHHhCCCCEEEEcCCcccc
Q 008663 207 YPSRIAIVGDVGLTYNT-------------TSTVSHMISNRPDLILLVGDVTYA 247 (558)
Q Consensus 207 ~~~rfavigD~g~~~~~-------------~~~l~~l~~~~pDfvl~~GDl~Y~ 247 (558)
..+||++++|+|.+... ...++.+.+.+||+||++||++..
T Consensus 31 ~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd~ 84 (431)
T 3t1i_A 31 NTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHE 84 (431)
T ss_dssp GEEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSS
T ss_pred CCEEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcCCCEEEEcCccccC
Confidence 47999999999987431 233445557899999999999853
No 26
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=98.79 E-value=1.7e-07 Score=98.65 Aligned_cols=41 Identities=27% Similarity=0.333 Sum_probs=31.4
Q ss_pred CCeEEEEEecCCCCCC---------h----HHHHHHHHhCCCCEEEEcCCcccc
Q 008663 207 YPSRIAIVGDVGLTYN---------T----TSTVSHMISNRPDLILLVGDVTYA 247 (558)
Q Consensus 207 ~~~rfavigD~g~~~~---------~----~~~l~~l~~~~pDfvl~~GDl~Y~ 247 (558)
..+||++++|+|.... . .+.++.+.+.+||+||++||++..
T Consensus 12 ~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~ 65 (417)
T 4fbw_A 12 NTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHD 65 (417)
T ss_dssp TCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSS
T ss_pred CCeEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcCCCEEEEcCccccC
Confidence 4799999999998743 1 234455557899999999999853
No 27
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=98.78 E-value=1.8e-08 Score=103.62 Aligned_cols=73 Identities=22% Similarity=0.391 Sum_probs=49.8
Q ss_pred eEEEEEecCCCCCCh--------------HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCccccccCCCCCCccchh
Q 008663 209 SRIAIVGDVGLTYNT--------------TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQ 274 (558)
Q Consensus 209 ~rfavigD~g~~~~~--------------~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y~ 274 (558)
+||++++|+|..... ...++.+.+.++|+||++||+++.. . +. .
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~------~------------~~----~ 58 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSS------R------------PS----P 58 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSS------S------------CC----H
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCC------C------------CC----H
Confidence 589999999987531 1233444567999999999998521 1 10 1
Q ss_pred HHHHHHHHhhhhhh-ccCCceeecCCCccc
Q 008663 275 PRWDYWGRYMQPVL-SKVPIMVVEGNHEYE 303 (558)
Q Consensus 275 ~~wd~~~~~l~~l~-~~~P~~~v~GNHD~~ 303 (558)
..+..+.+.++.+. ..+|+++++||||..
T Consensus 59 ~~~~~~~~~l~~l~~~~~~v~~v~GNHD~~ 88 (333)
T 1ii7_A 59 GTLKKAIALLQIPKEHSIPVFAIEGNHDRT 88 (333)
T ss_dssp HHHHHHHHHHHHHHTTTCCEEEECCTTTCC
T ss_pred HHHHHHHHHHHHHHHCCCcEEEeCCcCCCc
Confidence 12344455666654 368999999999986
No 28
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=98.71 E-value=7.1e-07 Score=94.84 Aligned_cols=41 Identities=27% Similarity=0.320 Sum_probs=31.6
Q ss_pred CCeEEEEEecCCCCCCh-------------HHHHHHHHhCCCCEEEEcCCcccc
Q 008663 207 YPSRIAIVGDVGLTYNT-------------TSTVSHMISNRPDLILLVGDVTYA 247 (558)
Q Consensus 207 ~~~rfavigD~g~~~~~-------------~~~l~~l~~~~pDfvl~~GDl~Y~ 247 (558)
..+||++++|+|.+... ..+++.+.+.+||+||++||++..
T Consensus 75 ~~mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~ 128 (472)
T 4fbk_A 75 NTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHD 128 (472)
T ss_dssp TCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCSBSS
T ss_pred CCeEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcCCCEEEEcCccccC
Confidence 37999999999987432 234555567899999999999853
No 29
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2
Probab=98.51 E-value=4.8e-07 Score=99.37 Aligned_cols=174 Identities=18% Similarity=0.188 Sum_probs=94.9
Q ss_pred CCeEEEEEecCCCCCC------------------hHHHHHHHHhCCCC-EEEEcCCcccccccccCCCCCccccccCCCC
Q 008663 207 YPSRIAIVGDVGLTYN------------------TTSTVSHMISNRPD-LILLVGDVTYANLYLTNGTGSDCYACSFANS 267 (558)
Q Consensus 207 ~~~rfavigD~g~~~~------------------~~~~l~~l~~~~pD-fvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~ 267 (558)
..+||++++|+|.... ....++++.+..+| ++|..||++....+
T Consensus 28 ~~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~----------------- 90 (552)
T 2z1a_A 28 FTLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLY----------------- 90 (552)
T ss_dssp CEEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHH-----------------
T ss_pred eeEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHH-----------------
Confidence 3699999999996421 12345556566787 88999999852110
Q ss_pred CCccchhHHHHHHHHhhhhhhccCCceeecCCCccccCccchhhHhhhhccCCCCCC-----CCC-----CCceEEEEEe
Q 008663 268 PIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKE-----SGS-----LSKFYYSFNA 337 (558)
Q Consensus 268 ~~~e~Y~~~wd~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~-----~~~-----~~~~yYsf~~ 337 (558)
.. + .......+.|+.+ -+-++++||||+... ...+..+.+...+|--. .+. ....|.-++.
T Consensus 91 --~~-~-~~~~~~~~~ln~l---g~d~~~lGNHEfd~g--~~~l~~~l~~~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~ 161 (552)
T 2z1a_A 91 --FN-Q-YRGLADRYFMHRL---RYRAMALGNHEFDLG--PGPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVV 161 (552)
T ss_dssp --HH-H-HTTHHHHHHHHHT---TCCEEECCGGGGTTC--HHHHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEE
T ss_pred --HH-H-hCCcHHHHHHHhc---CCCccccccccccCC--HHHHHHHHhhCCCCEEEEEEecCCCcccccccCCeEEEEE
Confidence 00 0 0112233444443 234788999999632 23333343333332111 000 1235667787
Q ss_pred Ce--EEEEEEcCccc-----------CCCcHHHHHHHHHHHhhcccCCCCEEEEEeCCcccccCCCcccchHHHHHHHHH
Q 008663 338 GG--IHFLMLAAYVS-----------FDKSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMED 404 (558)
Q Consensus 338 G~--v~fI~LDt~~~-----------~~~~~~Q~~WL~~~L~~~~~~~~~wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ 404 (558)
++ +-||.+.+... +....++.+...+.|++ .+...+|++.|.|.... ..
T Consensus 162 ~G~kIgiiG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~---~~~d~iIvL~H~g~~~d---------------~~ 223 (552)
T 2z1a_A 162 GGERVGIIGLTTPDTREISNPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYGED---------------LK 223 (552)
T ss_dssp TTEEEEEEEEECTTHHHHSCCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHHH---------------HH
T ss_pred CCEEEEEEEecccchhhccCCCCCcEECCHHHHHHHHHHHHHh---cCCCEEEEEeCCCcchH---------------HH
Confidence 76 55666654310 01112333333344443 24556999999985321 12
Q ss_pred HHHH-cCCcEEEECcccCcee
Q 008663 405 LLYK-YGVDVVFNGHVHAYER 424 (558)
Q Consensus 405 ll~~-~~VdlvlsGH~H~yeR 424 (558)
+..+ .+||++|+||.|....
T Consensus 224 la~~~~gvDlIlgGHtH~~~~ 244 (552)
T 2z1a_A 224 LARRLVGVQVIVGGHSHTLLG 244 (552)
T ss_dssp HHTTCSSCCEEEECSSCCCBS
T ss_pred HHHhCCCccEEEeCCcCcccc
Confidence 3333 4899999999997654
No 30
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=98.43 E-value=6.2e-07 Score=97.67 Aligned_cols=185 Identities=19% Similarity=0.175 Sum_probs=93.7
Q ss_pred CCeEEEEEecCCCCCCh-----------HHHHHHHHhC----CC-CEEEEcCCcccccccccCCCCCccccccCCCCCCc
Q 008663 207 YPSRIAIVGDVGLTYNT-----------TSTVSHMISN----RP-DLILLVGDVTYANLYLTNGTGSDCYACSFANSPIH 270 (558)
Q Consensus 207 ~~~rfavigD~g~~~~~-----------~~~l~~l~~~----~p-Dfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~ 270 (558)
..+||++++|+|..... ...++++.+. ++ +++|..||++.. . +..
T Consensus 7 ~~l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g-------~------------~~~ 67 (516)
T 1hp1_A 7 YKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTG-------V------------PES 67 (516)
T ss_dssp EEEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSS-------C------------HHH
T ss_pred eEEEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCC-------c------------chh
Confidence 46899999999975321 2334444332 46 799999999742 2 000
Q ss_pred cchhHHHHHHHHhhhhhhccCCceeecCCCccccCccchhhHhhhhccCCCCCC-------CC-CCCceEEEEEeCe--E
Q 008663 271 ETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKE-------SG-SLSKFYYSFNAGG--I 340 (558)
Q Consensus 271 e~Y~~~wd~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~-------~~-~~~~~yYsf~~G~--v 340 (558)
+. .......+.|+.+ . +-++++||||+... ...+..+.+...+|--. .+ .....|.-++.++ +
T Consensus 68 ~~--~~~~~~~~~ln~l--g-~d~~~~GNHEfd~g--~~~l~~~~~~~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kI 140 (516)
T 1hp1_A 68 DL--QDAEPDFRGMNLV--G-YDAMAIGNHEFDNP--LTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKI 140 (516)
T ss_dssp HT--TTTHHHHHHHHHH--T-CCEEECCGGGGSSC--HHHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEE
T ss_pred hh--cCCcHHHHHHhcc--C-CCEEeeccccccCC--HHHHHHHHhhCCCCEEEeEEEECCCCCcccCCeEEEEECCEEE
Confidence 00 0112233445554 2 34788999999532 12233333322232110 00 0123455677787 5
Q ss_pred EEEEEcCccc--CC-----------CcHHH-HHHHHHHHhhcccCCCCEEEEEeCCcccccCCCcc--cchHHHHHHHHH
Q 008663 341 HFLMLAAYVS--FD-----------KSGDQ-YKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHY--REAECMRVAMED 404 (558)
Q Consensus 341 ~fI~LDt~~~--~~-----------~~~~Q-~~WL~~~L~~~~~~~~~wvIv~~H~P~y~s~~~~~--~~~~~~r~~l~~ 404 (558)
-||.+.+... +. ...+. .+|++ .|++. .+...+|+++|.|......... ... ..+..
T Consensus 141 giiG~~~~~~~~~~~p~~~~~~~~~d~~~~~~~~v~-~l~~~--~~~d~iI~l~H~g~~~~~~~~~~~~~~----~~la~ 213 (516)
T 1hp1_A 141 AVIGLTTDDTAKIGNPEYFTDIEFRKPADEAKLVIQ-ELQQT--EKPDIIIAATHMGHYDNGEHGSNAPGD----VEMAR 213 (516)
T ss_dssp EEEEEECTTTTTSSSCCSCTTEEECCHHHHHHHHHH-HHHHH--TCCSEEEEEEESCCCGGGCCTTSCCCH----HHHHH
T ss_pred EEEEecccCcccccCcCccCCcEEeCHHHHHHHHHH-HHHhc--CCCCEEEEEecCCccCCCcccccCchH----HHHHH
Confidence 5666654321 00 11122 23333 34321 2456799999999864321100 111 12222
Q ss_pred HHHHcCCcEEEECcccCcee
Q 008663 405 LLYKYGVDVVFNGHVHAYER 424 (558)
Q Consensus 405 ll~~~~VdlvlsGH~H~yeR 424 (558)
.+...+||++|+||.|...-
T Consensus 214 ~~~~~~iDlilgGHtH~~~~ 233 (516)
T 1hp1_A 214 ALPAGSLAMIVGGHSQDPVC 233 (516)
T ss_dssp HSCTTSSSEEECCSSCCBCC
T ss_pred hCCCCceeEEECCCCCcccc
Confidence 23334599999999997643
No 31
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}
Probab=98.39 E-value=3.2e-06 Score=92.23 Aligned_cols=186 Identities=15% Similarity=0.177 Sum_probs=95.3
Q ss_pred CeEEEEEecCCCCCC-----------------hHHHHHHHHhCCCC-EEEEcCCcccccccccCCCCCccccccCCCCCC
Q 008663 208 PSRIAIVGDVGLTYN-----------------TTSTVSHMISNRPD-LILLVGDVTYANLYLTNGTGSDCYACSFANSPI 269 (558)
Q Consensus 208 ~~rfavigD~g~~~~-----------------~~~~l~~l~~~~pD-fvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~ 269 (558)
.++|++++|+|.... ....++++.+..++ ++|..||++.. . +.
T Consensus 19 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g-------s------------~~ 79 (527)
T 3qfk_A 19 NIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQG-------S------------PF 79 (527)
T ss_dssp EEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSS-------S------------HH
T ss_pred cEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCC-------c------------HH
Confidence 699999999996531 12345555556676 77889999842 2 00
Q ss_pred ccchhHH----HHHHHHhhhhhhccCCceeecCCCccccCccchhhHhhhhccCCCCCCC-----CC--CCceEEEEEeC
Q 008663 270 HETYQPR----WDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKES-----GS--LSKFYYSFNAG 338 (558)
Q Consensus 270 ~e~Y~~~----wd~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~-----~~--~~~~yYsf~~G 338 (558)
. .|-.. .....+.|+.+ .. -++++||||+... ...+..+.+...+|--.. +. ....|.-++.+
T Consensus 80 ~-~~~~~~~~~~~~~~~~ln~l--g~-D~~t~GNHefd~G--~~~l~~~~~~~~~p~l~aNv~~~g~p~~~~py~i~e~~ 153 (527)
T 3qfk_A 80 C-NYLIAHSGSSQPLVDFYNRM--AF-DFGTLGNHEFNYG--LPYLKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQVG 153 (527)
T ss_dssp H-HHHHHTTCSSHHHHHHHHHT--CC-CEECCCGGGGTTC--HHHHHHHHHHCSSCBCCSSEEETTEESSSCSEEEEEET
T ss_pred H-HHHhhcccCcchHHHHHHhc--CC-cEEeccccccccC--HHHHHHHHHhCCCCEEEeEeeeCCCCccCCCEEEEEEC
Confidence 0 00000 12333444444 33 3567999998532 233444444333332111 10 11346667788
Q ss_pred e--EEEEEEcCccc--CCC--------cHHHHHHHHHHHhhcccCCCCEEEEEeCCcccccCCCc------ccchHHHHH
Q 008663 339 G--IHFLMLAAYVS--FDK--------SGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAH------YREAECMRV 400 (558)
Q Consensus 339 ~--v~fI~LDt~~~--~~~--------~~~Q~~WL~~~L~~~~~~~~~wvIv~~H~P~y~s~~~~------~~~~~~~r~ 400 (558)
+ +-||.+.+... +.. .....+.+++.+++.+ .+...+|+++|.+........ ..+..
T Consensus 154 G~kIgviG~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~v~~l~-~~~D~iIvl~H~G~~~d~~~~~~~~~~~~e~~---- 228 (527)
T 3qfk_A 154 DQTVGVIGLTTQFIPHWEQPEHIQSLTFHSAFEILQQYLPEMK-RHADIIVVCYHGGFEKDLESGTPTEVLTGENE---- 228 (527)
T ss_dssp TEEEEEEEEECTTGGGTSCHHHHTTEEECCHHHHHHHHHHHHH-HHCSEEEEEEECCCSBCTTTCCBSSCCSSSCC----
T ss_pred CEEEEEEEeccCCcccccCccccCCcEEcCHHHHHHHHHHHHH-hCCCEEEEEeCcCcccccccCccccccccchH----
Confidence 7 45566654311 110 1122344444444433 345679999998764321000 01100
Q ss_pred HHHHHHHH--cCCcEEEECcccCcee
Q 008663 401 AMEDLLYK--YGVDVVFNGHVHAYER 424 (558)
Q Consensus 401 ~l~~ll~~--~~VdlvlsGH~H~yeR 424 (558)
..++.++ .+||++|+||.|...-
T Consensus 229 -~~~la~~~~~giDlIlgGHtH~~~~ 253 (527)
T 3qfk_A 229 -GYAMLEAFSKDIDIFITGHQHRQIA 253 (527)
T ss_dssp -HHHHHHHHGGGCSEEECCSSCCEEE
T ss_pred -HHHHHHhcCCCCcEEEECCCCcccc
Confidence 1122222 4899999999998653
No 32
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=98.36 E-value=8.8e-07 Score=84.72 Aligned_cols=75 Identities=16% Similarity=0.269 Sum_probs=46.4
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCccccccCCCCCCccchhHHHHHHHHhhhhh
Q 008663 209 SRIAIVGDVGLTYNT-TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPV 287 (558)
Q Consensus 209 ~rfavigD~g~~~~~-~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y~~~wd~~~~~l~~l 287 (558)
+||+++||+|..... .+.++.+.+.++|+|+++||++.. |... ...+.|+ -....+.++.+
T Consensus 26 mki~~iSD~H~~~~~l~~~l~~~~~~~~d~vi~~GDl~~~------g~~~----------~~~~~~~--~~~~~~~l~~~ 87 (208)
T 1su1_A 26 MKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNH------GPRN----------ALPEGYA--PAKVVERLNEV 87 (208)
T ss_dssp CEEEEECCCTTBHHHHHHHHHHHHHHTCSEEEECSCCSCC------CTTS----------CCCTTBC--HHHHHHHHHTT
T ss_pred EEEEEEEcCCCCHHHHHHHHHHHHhcCCCEEEECCCcccc------Cccc----------ccccccC--HHHHHHHHHhc
Confidence 799999999975322 234455555689999999999952 1100 0111111 12333444444
Q ss_pred hccCCceeecCCCccc
Q 008663 288 LSKVPIMVVEGNHEYE 303 (558)
Q Consensus 288 ~~~~P~~~v~GNHD~~ 303 (558)
..|+++++||||..
T Consensus 88 --~~~v~~V~GNHD~~ 101 (208)
T 1su1_A 88 --AHKVIAVRGNCDSE 101 (208)
T ss_dssp --GGGEEECCCTTCCH
T ss_pred --CCceEEEECCCchH
Confidence 35899999999974
No 33
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=98.28 E-value=2.2e-06 Score=93.96 Aligned_cols=176 Identities=18% Similarity=0.227 Sum_probs=93.6
Q ss_pred CCeEEEEEecCCCCCC------------------h---HHHHHHHHhCCC-CEEEEcCCcccccccccCCCCCccccccC
Q 008663 207 YPSRIAIVGDVGLTYN------------------T---TSTVSHMISNRP-DLILLVGDVTYANLYLTNGTGSDCYACSF 264 (558)
Q Consensus 207 ~~~rfavigD~g~~~~------------------~---~~~l~~l~~~~p-Dfvl~~GDl~Y~d~~~~~G~~~~~~~~~~ 264 (558)
..++|++++|+|.... . ...++++.+..+ +++|..||++....+
T Consensus 24 ~~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~-------------- 89 (546)
T 4h2g_A 24 WELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIW-------------- 89 (546)
T ss_dssp EEEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHH--------------
T ss_pred eEEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchh--------------
Confidence 4799999999996421 1 123455555566 599999999953211
Q ss_pred CCCCCccchhHHHHHHHHhhhhhhccCCceeecCCCccccCccchhhH-hhhhccCCCCCCCC---C---------CCce
Q 008663 265 ANSPIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFV-AYTSRFAFPSKESG---S---------LSKF 331 (558)
Q Consensus 265 ~~~~~~e~Y~~~wd~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~-~y~~~f~~P~~~~~---~---------~~~~ 331 (558)
... .......+.|+.+ . +-++++||||+... ...+. .+.+...+|--... . ....
T Consensus 90 -----~~~--~~g~~~~~~ln~l--g-~d~~~~GNHEfd~g--~~~l~~~~~~~~~~~~l~aNv~~~~~~~p~~~~~~~~ 157 (546)
T 4h2g_A 90 -----FTV--YKGAEVAHFMNAL--R-YDAMALGNHEFDNG--VEGLIEPLLKEAKFPILSANIKAKGPLASQISGLYLP 157 (546)
T ss_dssp -----HHH--HTTHHHHHHHHHH--T-CSEEECCGGGGTTH--HHHHHTTTTTTCSSCEECSSEEECHHHHHHHBTTBBS
T ss_pred -----hhh--hCChHHHHHHHhc--C-CcEEeccCcccccC--HHHHHHHHHhhcCCCEEEEEeecCCCCCccccccCCC
Confidence 000 0112233445444 2 33678999999522 12233 33333333321100 0 1234
Q ss_pred EEEEEeCeEE--EEEEcCccc---CCC-----cHHHHHHHHHHHhhcccCCCCEEEEEeCCcccccCCCcccchHHHHHH
Q 008663 332 YYSFNAGGIH--FLMLAAYVS---FDK-----SGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVA 401 (558)
Q Consensus 332 yYsf~~G~v~--fI~LDt~~~---~~~-----~~~Q~~WL~~~L~~~~~~~~~wvIv~~H~P~y~s~~~~~~~~~~~r~~ 401 (558)
|.-++.++++ ||.+.+... ... -....+.+++.+++.++.+...+|+++|.+.... .
T Consensus 158 ~~i~~~~G~kIgiiG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~~g~D~iI~l~H~g~~~d------------~- 224 (546)
T 4h2g_A 158 YKVLPVGDEVVGIVGYTSKETPFLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGFEMD------------K- 224 (546)
T ss_dssp EEEEEETTEEEEEEEEECTTHHHHSCCCSSEEECCHHHHHHHHHHHHHHTTCCCEEEEEESCHHHH------------H-
T ss_pred eEEEEECCEEEEEEEecccccccccCCCCCcEEccHHHHHHHHHHHHHhcCCCEEEEEeccCccch------------H-
Confidence 6667888755 555544210 001 0123344555554443344667999999885320 1
Q ss_pred HHHHHHH-cCCcEEEECcccCce
Q 008663 402 MEDLLYK-YGVDVVFNGHVHAYE 423 (558)
Q Consensus 402 l~~ll~~-~~VdlvlsGH~H~ye 423 (558)
.+..+ .+||++|+||.|...
T Consensus 225 --~la~~~~giDlIlgGHtH~~~ 245 (546)
T 4h2g_A 225 --LIAQKVRGVDVVVGGHSNTFL 245 (546)
T ss_dssp --HHHHHSTTCCEEECCSSCCCC
T ss_pred --HHHHhCCCCcEEEeCCcCccc
Confidence 12222 379999999999754
No 34
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A
Probab=98.27 E-value=1.2e-05 Score=88.17 Aligned_cols=144 Identities=19% Similarity=0.132 Sum_probs=75.8
Q ss_pred CC-EEEEcCCcccccccccCCCCCccccccCCCCCCccchhHHHHHHHHhhhhhhccCCceeecCCCccccCccchhhHh
Q 008663 235 PD-LILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVA 313 (558)
Q Consensus 235 pD-fvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y~~~wd~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~ 313 (558)
|| ++|..||++..... .. + .......+.|+.+ ..+++ + ||||+.. +...+..
T Consensus 123 pd~Lll~~GD~~~gs~~-------------------~~-~-~~g~~~~~~ln~l--g~d~~-~-GNHEfd~--G~~~l~~ 175 (562)
T 2wdc_A 123 GKALVLDGGDTWTNSGL-------------------SL-L-TRGEAVVRWQNLV--GVDHM-V-SHWEWTL--GRERVEE 175 (562)
T ss_dssp CCEEEEECSCCSSSSHH-------------------HH-H-HTTHHHHHHHHHH--TCCEE-C-CSGGGGG--CHHHHHH
T ss_pred CCEEEEeCCCCCCcchh-------------------hh-h-hCCHHHHHHHHhh--CCcEE-e-cchhccc--CHHHHHH
Confidence 88 89999999952110 00 0 0112334555555 55655 6 9999853 2233444
Q ss_pred hhhccCCCCCCC-------C-CCCceEEEEEeCe--EEEEEEcCcc-------------cCCCcHHHHHHHHHHHhhccc
Q 008663 314 YTSRFAFPSKES-------G-SLSKFYYSFNAGG--IHFLMLAAYV-------------SFDKSGDQYKWLEEDLANVER 370 (558)
Q Consensus 314 y~~~f~~P~~~~-------~-~~~~~yYsf~~G~--v~fI~LDt~~-------------~~~~~~~Q~~WL~~~L~~~~~ 370 (558)
+.+.+.+|--.. + .....|.-++.++ +-||.+.+.. .+....+..+-..+.|++
T Consensus 176 ~l~~~~~p~L~aNv~~~~~~~~~~~py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--- 252 (562)
T 2wdc_A 176 LLGLFRGEFLSYNIVDDLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERRLQEAVDKARA--- 252 (562)
T ss_dssp HHHHCCSEECCSSCEETTTCCBSSCSEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCCCHHHHHHHHHHHHH---
T ss_pred HHHhCCCCEEEEEEEecCCCCcccCCeEEEEECCeEEEEEeeccCcccccccccccCCcEEeCHHHHHHHHHHHHHH---
Confidence 444443332110 1 0122455677777 5556665421 111122333222233433
Q ss_pred CCCCEEEEEeCCcccccCCCcccchHHHHHHHHHHHHH-cCCcEEEECcccCce
Q 008663 371 EVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYK-YGVDVVFNGHVHAYE 423 (558)
Q Consensus 371 ~~~~wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~-~~VdlvlsGH~H~ye 423 (558)
.+...+|++.|.|.... ..+.++ .+||++|+||.|...
T Consensus 253 ~~~d~iIvLsH~g~~~d---------------~~la~~~~giDlIlgGHtH~~~ 291 (562)
T 2wdc_A 253 EGANAVVLLSHNGMQLD---------------AALAERIRGIDLILSGHTHDLT 291 (562)
T ss_dssp TTCSEEEEEECSCHHHH---------------HHHHTTSSSCCEEEECSSCCCC
T ss_pred CCCCEEEEEeCCCCcch---------------HHHHhcCCCCcEEEeCCCCCCC
Confidence 34567999999985320 123333 489999999999764
No 35
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=98.26 E-value=4.9e-06 Score=91.80 Aligned_cols=176 Identities=18% Similarity=0.184 Sum_probs=94.9
Q ss_pred CCeEEEEEecCCCCCCh----------------------HHHHHHHHhCCCC-EEEEcCCcccccccccCCCCCcccccc
Q 008663 207 YPSRIAIVGDVGLTYNT----------------------TSTVSHMISNRPD-LILLVGDVTYANLYLTNGTGSDCYACS 263 (558)
Q Consensus 207 ~~~rfavigD~g~~~~~----------------------~~~l~~l~~~~pD-fvl~~GDl~Y~d~~~~~G~~~~~~~~~ 263 (558)
..++|++++|+|..... ...++++.+..++ ++|..||++....+.
T Consensus 11 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~------------ 78 (579)
T 3ztv_A 11 VELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYF------------ 78 (579)
T ss_dssp EEEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHH------------
T ss_pred eEEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceee------------
Confidence 46999999999954221 1234555555665 899999999532110
Q ss_pred CCCCCCccchhHHHHHHHHhhhhhhccCCceeecCCCccccCccchhhHhhhhccCCCCCC------CCC----CCceEE
Q 008663 264 FANSPIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKE------SGS----LSKFYY 333 (558)
Q Consensus 264 ~~~~~~~e~Y~~~wd~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~------~~~----~~~~yY 333 (558)
..+ ......+.|+.+ -+-++++||||+.. +...+..+.+...+|--. .+. .-..|.
T Consensus 79 -------~~~--~g~~~~~~ln~l---g~D~~tlGNHEfd~--G~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~ 144 (579)
T 3ztv_A 79 -------TLF--GGSADAAVMNAG---NFHYFTLGNHEFDA--GNEGLLKLLEPLKIPVLSANVIPDKSSILYNKWKPYD 144 (579)
T ss_dssp -------HTT--TTHHHHHHHHHH---TCSEEECCSGGGTT--HHHHHHHHHTTCCSCEECSSEEECTTSTTTTSCBSEE
T ss_pred -------eec--CCHHHHHHHHhc---CcCeeecccccccc--CHHHHHHHHHhcCCCeeeeeEeccCCcccccccCCeE
Confidence 000 112233444444 23457899999852 223344444444443210 011 113466
Q ss_pred EEEeCe--EEEEEEcC-c-----ccCCC---cHHHHHHHHHHHhhcccCCCCEEEEEeCCcccccCCCcccchHHHHHHH
Q 008663 334 SFNAGG--IHFLMLAA-Y-----VSFDK---SGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAM 402 (558)
Q Consensus 334 sf~~G~--v~fI~LDt-~-----~~~~~---~~~Q~~WL~~~L~~~~~~~~~wvIv~~H~P~y~s~~~~~~~~~~~r~~l 402 (558)
-++.++ +-||.+.+ . ..... .....+-+++.+++.++.+...+|+++|.+.... .
T Consensus 145 i~~~~G~kIgviG~t~~~~~~~~~~p~~~~~f~d~~~~~~~~v~~lk~~g~d~iI~l~H~G~~~d------------~-- 210 (579)
T 3ztv_A 145 IFTVDGEKIAIIGLDTVNKTVNSSSPGKDVKFYDEIATAQIMANALKQQGINKIILLSHAGSEKN------------I-- 210 (579)
T ss_dssp EEEETTEEEEEEEEECSHHHHHHSCCCTTEEECCHHHHHHHHHHHHHTTTCCCEEEEEETCHHHH------------H--
T ss_pred EEEECCEEEEEEEEEcCCccccccCCCCCceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchhh------------H--
Confidence 677887 55666743 1 00000 1122344555555544344567999999874220 1
Q ss_pred HHHHHH-cCCcEEEECcccCce
Q 008663 403 EDLLYK-YGVDVVFNGHVHAYE 423 (558)
Q Consensus 403 ~~ll~~-~~VdlvlsGH~H~ye 423 (558)
.+..+ .+||++|+||.|...
T Consensus 211 -~la~~~~giDlIlgGHtH~~~ 231 (579)
T 3ztv_A 211 -EIAQKVNDIDVIVTGDSHYLY 231 (579)
T ss_dssp -HHHHHCSSCCEEEECSSCCEE
T ss_pred -HHHHhCCCCCEEEeCCCCccc
Confidence 22222 379999999999876
No 36
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=98.17 E-value=1.1e-05 Score=87.49 Aligned_cols=188 Identities=18% Similarity=0.160 Sum_probs=93.7
Q ss_pred CeEEEEEecCCCCCC----------------h---HHHHHHHHhCCCCEEEE-cCCcccccccccCCCCCccccccCCCC
Q 008663 208 PSRIAIVGDVGLTYN----------------T---TSTVSHMISNRPDLILL-VGDVTYANLYLTNGTGSDCYACSFANS 267 (558)
Q Consensus 208 ~~rfavigD~g~~~~----------------~---~~~l~~l~~~~pDfvl~-~GDl~Y~d~~~~~G~~~~~~~~~~~~~ 267 (558)
.++|++++|+|.... . ...++++.+.+++.+++ .||++....+
T Consensus 6 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~~~----------------- 68 (509)
T 3ive_A 6 DVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGPYI----------------- 68 (509)
T ss_dssp EEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHH-----------------
T ss_pred EEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCchh-----------------
Confidence 689999999995421 1 22345555567876655 9999842110
Q ss_pred CCccchhHHHHHHHHhhhhhhccCCceeecCCCccccCccchhhHhhhhccCCCCCC-------CCCC--CceEEEEEeC
Q 008663 268 PIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKE-------SGSL--SKFYYSFNAG 338 (558)
Q Consensus 268 ~~~e~Y~~~wd~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~-------~~~~--~~~yYsf~~G 338 (558)
...+ ......+.|+.+ -+-++++||||+... ...+..+.+...+|--. .+.. ...|.-++.+
T Consensus 69 --~~~~--~g~~~~~~ln~l---g~D~~tlGNHEfd~G--~~~l~~~l~~~~~p~l~aNv~~~~~~~p~~~~py~i~e~~ 139 (509)
T 3ive_A 69 --SSLT--KGKAIIDIMNTM---PFDAVTIGNHEFDHG--WDNTLLQLSQAKFPIVQGNIFYQNSSKSFWDKPYTIIEKD 139 (509)
T ss_dssp --HHTT--TTHHHHHHHTTS---CCSEECCCGGGGTTC--HHHHHHHHTTCSSCBCCCSEEETTSCCBSSSCSEEEEEET
T ss_pred --hhhc--CChHHHHHHHhc---CCcEEeecccccccC--HHHHHHHHhhCCCCEEEEEEEECCCCCccCcCCeEEEEEC
Confidence 0000 112233444443 345677899998532 22333343333333210 0110 2346667788
Q ss_pred e--EEEEEEcCcc-----cC---C---CcHHHHHHHHHHHhhcccCCCCEEEEEeCCcccccCCCccc-chHHHHHHHHH
Q 008663 339 G--IHFLMLAAYV-----SF---D---KSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYR-EAECMRVAMED 404 (558)
Q Consensus 339 ~--v~fI~LDt~~-----~~---~---~~~~Q~~WL~~~L~~~~~~~~~wvIv~~H~P~y~s~~~~~~-~~~~~r~~l~~ 404 (558)
+ +-||.+-+.. .. . ......+.+++.+++.++. ...+|+++|.+.-........ +.......-..
T Consensus 140 G~kIgiiG~t~~~~~~~~~~~~~~~g~~~~d~~~~~~~~v~~Lk~~-~D~iIvl~H~G~~~~~~~~~~~~~~~~~~~d~~ 218 (509)
T 3ive_A 140 GVKIGVIGLHGVFAFNDTVSAATRVGIEARDEIKWLQRYIDELKGK-VDLTVALIHEGVPARQSSMGGTDVRRALDKDIQ 218 (509)
T ss_dssp TEEEEEEEEECHHHHHHHSCGGGCTTEEECCHHHHHHHHHHHHTTT-CSEEEEEEECSSCCCCCCC---CCCCCCHHHHH
T ss_pred CEEEEEEecccCcccccccccccCCCCEEcCHHHHHHHHHHHHHhc-CCEEEEEeccCcCCccccccccccccccchHHH
Confidence 7 4556663310 00 0 0122344455555554433 677999999885322111000 00000001122
Q ss_pred HHHHc-CCcEEEECcccCc
Q 008663 405 LLYKY-GVDVVFNGHVHAY 422 (558)
Q Consensus 405 ll~~~-~VdlvlsGH~H~y 422 (558)
+.++. +||++|+||.|..
T Consensus 219 la~~~~giDlIlgGHtH~~ 237 (509)
T 3ive_A 219 TASQVKGLDILITGHAHVG 237 (509)
T ss_dssp HHHHCSSCCEEEEESSCCC
T ss_pred HHhcCCCCcEEEeCCcCcc
Confidence 33333 7999999999964
No 37
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=98.10 E-value=1.5e-06 Score=83.60 Aligned_cols=39 Identities=28% Similarity=0.419 Sum_probs=26.6
Q ss_pred CeEEEEEecCCCCCCh-HHHHHHHHh-CCCCEEEEcCCccc
Q 008663 208 PSRIAIVGDVGLTYNT-TSTVSHMIS-NRPDLILLVGDVTY 246 (558)
Q Consensus 208 ~~rfavigD~g~~~~~-~~~l~~l~~-~~pDfvl~~GDl~Y 246 (558)
..|++++||+|..... .+.++.+.. .++|.++++||++.
T Consensus 12 ~~~i~visDiHg~~~~l~~~l~~~~~~~~~d~~i~~GD~~~ 52 (221)
T 1g5b_A 12 YRNIWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVD 52 (221)
T ss_dssp CSCEEEECCCTTCHHHHHHHHHHHTCCTTTCEEEECSCCSS
T ss_pred CceEEEEEcCCCCHHHHHHHHHHccCCCCCCEEEEeCCccC
Confidence 4689999999964221 123333332 26899999999995
No 38
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2
Probab=98.09 E-value=5.8e-05 Score=82.67 Aligned_cols=195 Identities=18% Similarity=0.140 Sum_probs=96.5
Q ss_pred EEcCCCCCCCCCCeEEEEEecCCCCCC--------------hHHHHHHHH----hCCCC-EEEEcCCcccccccccCCCC
Q 008663 196 FRTMPDSSSTSYPSRIAIVGDVGLTYN--------------TTSTVSHMI----SNRPD-LILLVGDVTYANLYLTNGTG 256 (558)
Q Consensus 196 F~T~P~~~~~~~~~rfavigD~g~~~~--------------~~~~l~~l~----~~~pD-fvl~~GDl~Y~d~~~~~G~~ 256 (558)
+-++|........++|++++|+|.... ..+.+..+. +.+++ ++|..||++....+..
T Consensus 3 ~~s~p~~~~~~~~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~---- 78 (557)
T 3c9f_A 3 LASFPHRNLTWNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSD---- 78 (557)
T ss_dssp --CCCBCCCCCCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHH----
T ss_pred cccCCCCCCCceEEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchh----
Confidence 445565555556899999999997521 112222222 35788 5799999995321110
Q ss_pred CccccccCCCCCCccchhHHHHHHHHhhhhhhccCCceeecCCCccccCcc-chhhHhhhhccCCCCCC--------CCC
Q 008663 257 SDCYACSFANSPIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAE-NRTFVAYTSRFAFPSKE--------SGS 327 (558)
Q Consensus 257 ~~~~~~~~~~~~~~e~Y~~~wd~~~~~l~~l~~~~P~~~v~GNHD~~~~~~-~~~~~~y~~~f~~P~~~--------~~~ 327 (558)
.+..+.....+.|+.+ . .=++++||||+..... ...+....+...+|--. .+.
T Consensus 79 ---------------~~~~~g~~~~~~ln~l--g-~Da~tlGNHEfD~G~~~l~~~~~~l~~a~fp~L~ANv~~~~~~g~ 140 (557)
T 3c9f_A 79 ---------------ITSPNGLKSTPIFIKQ--D-YDLLTIGNHELYLWENSKQEYETVVNHFQDKYVCSNVDIRLDNGL 140 (557)
T ss_dssp ---------------SSSSTTTTTHHHHTTS--C-CSEECCCGGGSSSHHHHHHHHHHHHHHTTTTBBCSSEEEECTTSC
T ss_pred ---------------hcccCCHHHHHHHHhc--C-CCEEeecchhcccchHHHHHHHHHHHhCCCCEEEeecccccccCC
Confidence 0000011112344444 2 3366889999963211 01232223333333211 111
Q ss_pred ---CCceEEEEEe--Ce--EEEEEEcCcccCC------CcHHH---HHHHHHHHhhcccCCCCEEEEEeCCcccccCCCc
Q 008663 328 ---LSKFYYSFNA--GG--IHFLMLAAYVSFD------KSGDQ---YKWLEEDLANVEREVTPWLVATWHAPWYSTYKAH 391 (558)
Q Consensus 328 ---~~~~yYsf~~--G~--v~fI~LDt~~~~~------~~~~Q---~~WL~~~L~~~~~~~~~wvIv~~H~P~y~s~~~~ 391 (558)
....|.-++. ++ +-||.+.+..... ....+ .+|+++.++ .+...+|+++|.+.....
T Consensus 141 ~~~~~~py~I~e~~~~G~kIgiiGlt~~~~~~~~~~~~~d~~e~i~~~~v~~l~~----~~~D~IIvL~H~G~~~~~--- 213 (557)
T 3c9f_A 141 FVPLGLKYKYFTTPIRGIRVMAFGFLFDFKRFNSGTRVTPMAETIHEPWFQEALK----HEVDLIIIVGHTPISHNW--- 213 (557)
T ss_dssp EEESSBSCEEEECTTTCCEEEEEECCCCCCCCCTTEEECCHHHHTTSHHHHHHTT----SCCSEEEEECSSCCCTTT---
T ss_pred ccccCCCeEEEEEccCCEEEEEEEeecCCCCCCCCcEECCHHHHHHHHHHHHHHh----cCCCEEEEecccCccccC---
Confidence 1234556777 76 5555555431110 01112 136665442 356779999999873111
Q ss_pred ccchHHHHHHHHHHHHH-cCCcE-EEECcccCce
Q 008663 392 YREAECMRVAMEDLLYK-YGVDV-VFNGHVHAYE 423 (558)
Q Consensus 392 ~~~~~~~r~~l~~ll~~-~~Vdl-vlsGH~H~ye 423 (558)
.+. ......+.+. .++|+ +|.||.|...
T Consensus 214 -d~~---~~~~~~lA~~~~giDilIlgGHtH~~~ 243 (557)
T 3c9f_A 214 -GEF---YQVHQYLRQFFPDTIIQYFGGHSHIRD 243 (557)
T ss_dssp -CHH---HHHHHHHHHHCTTSEEEEEECSSCCEE
T ss_pred -ccc---cHHHHHHHHhCCCCCEEEECCCCCCCC
Confidence 111 1111222222 48995 9999999874
No 39
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=98.02 E-value=0.00011 Score=72.03 Aligned_cols=188 Identities=21% Similarity=0.294 Sum_probs=98.5
Q ss_pred eEEEEEecCCCCCCh---HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCccccccCCCCCCccchhHHHHHHHHhhh
Q 008663 209 SRIAIVGDVGLTYNT---TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQ 285 (558)
Q Consensus 209 ~rfavigD~g~~~~~---~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y~~~wd~~~~~l~ 285 (558)
+||+++||.=..... ...+.++.+.. |+++..|.... .|.. +. ....+.|.
T Consensus 1 m~ilfiGDi~g~~G~~~v~~~l~~lr~~~-d~vi~ngen~~------~G~g------------~~-------~~~~~~l~ 54 (252)
T 2z06_A 1 MRVLFIGDVMAEPGLRAVGLHLPDIRDRY-DLVIANGENAA------RGKG------------LD-------RRSYRLLR 54 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHGGGC-SEEEEECTTTT------TTSS------------CC-------HHHHHHHH
T ss_pred CEEEEEEecCCcccHHHHHHHHHHHHhhC-CEEEEeCCCcc------CCCC------------cC-------HHHHHHHH
Confidence 489999997433222 23445555556 98887776653 2331 11 12223344
Q ss_pred hhhccCCceeecCCCccccCccchhhHhhhhcc--CCCCCC-CCCCCceEEEEEeCeEEEEEEc--CcccCCCcHHHHHH
Q 008663 286 PVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRF--AFPSKE-SGSLSKFYYSFNAGGIHFLMLA--AYVSFDKSGDQYKW 360 (558)
Q Consensus 286 ~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f--~~P~~~-~~~~~~~yYsf~~G~v~fI~LD--t~~~~~~~~~Q~~W 360 (558)
.+ .+-. ++.||||+... ....|.+.. -.|.+- .+.....|.-++.++.++-+++ +......-..-.+-
T Consensus 55 ~~--G~D~-~T~GNHefD~~----~l~~~l~~~~~vrpaN~~~~~pg~~~~i~~~~G~kIgVi~l~g~~~~~~~~~pf~~ 127 (252)
T 2z06_A 55 EA--GVDL-VSLGNHAWDHK----EVYALLESEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRA 127 (252)
T ss_dssp HH--TCCE-EECCTTTTSCT----THHHHHHHSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHH
T ss_pred hC--CCCE-EEeccEeeECc----hHHHHhccCCceEeecCCCCCCCCCeEEEEECCEEEEEEEcccccCccccCCHHHH
Confidence 43 3334 47799999743 223333222 112221 1122456777888876654443 33221111112333
Q ss_pred HHHHHhhcccCCCCEEEEEeCCcccccCCCcccchHHHHHHHHHHHHHcCCcEEEECcccCceeeeeccCCccCCCCcEE
Q 008663 361 LEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYTLDPCGPVH 440 (558)
Q Consensus 361 L~~~L~~~~~~~~~wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~v~~~~~~~~g~vy 440 (558)
+++.+++.+ ++.+|+.+|.-.. ...+.+. ...+-+||+|+.||+|....- ..+-++|+.|
T Consensus 128 ~~~~v~~lk---~d~IIv~~H~g~t-----------sek~~la-~~~dg~Vd~VvGgHTHv~t~d-----~~il~~gt~~ 187 (252)
T 2z06_A 128 LDRLLEEEK---ADYVLVEVHAEAT-----------SEKMALA-HYLDGRASAVLGTHTHVPTLD-----ATRLPKGTLY 187 (252)
T ss_dssp HHHHHHHCC---CSEEEEEEECSCH-----------HHHHHHH-HHHBTTBSEEEEESSCSCBSC-----CEECTTSCEE
T ss_pred HHHHHHHhC---CCEEEEEeCCCcH-----------HHHHHHH-HhCCCCeEEEEcCCCCcCCCc-----cEEcCCCcEe
Confidence 555555543 6679999996321 1112222 122346999999999975332 2223578899
Q ss_pred EE-eCCCccc
Q 008663 441 IT-VGDGGNR 449 (558)
Q Consensus 441 iv-~G~gG~~ 449 (558)
|+ .|..|..
T Consensus 188 itd~G~~G~y 197 (252)
T 2z06_A 188 QTDVGMTGTY 197 (252)
T ss_dssp ESCCCCBEES
T ss_pred ecCCcccccC
Confidence 87 4666654
No 40
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=98.01 E-value=7.1e-05 Score=74.53 Aligned_cols=191 Identities=19% Similarity=0.240 Sum_probs=100.5
Q ss_pred CeEEEEEecCCCCCChH---HHHHHHHhC-CCCEEEEcCCcccccccccCCCCCccccccCCCCCCccchhHHHHHHHHh
Q 008663 208 PSRIAIVGDVGLTYNTT---STVSHMISN-RPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRY 283 (558)
Q Consensus 208 ~~rfavigD~g~~~~~~---~~l~~l~~~-~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y~~~wd~~~~~ 283 (558)
.+||+++||.+...... ..+.++.+. ++|+++..||.+.. |.. +. ....+.
T Consensus 4 ~m~ilf~GDv~G~~G~~~l~~~l~~lr~~~~~d~vi~Ngen~~g------G~g------------~~-------~~~~~~ 58 (281)
T 1t71_A 4 SIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTH------GKG------------LS-------LKHYEF 58 (281)
T ss_dssp CCEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTT------TSS------------CC-------HHHHHH
T ss_pred eEEEEEECCcCChHHHHHHHHHHHHHHHhcCCCEEEEcCCCCCC------CCC------------cC-------HHHHHH
Confidence 48999999998543222 234455443 68999999998752 321 11 122233
Q ss_pred hhhhhccCCceeecCCCccccCccchhhHhhhhc--c----CCCCCCCC-CCCceEEEEEeCe--EEEEEEcCcccCC--
Q 008663 284 MQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSR--F----AFPSKESG-SLSKFYYSFNAGG--IHFLMLAAYVSFD-- 352 (558)
Q Consensus 284 l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~--f----~~P~~~~~-~~~~~yYsf~~G~--v~fI~LDt~~~~~-- 352 (558)
|..+ .+ =.++.||||+.... + ...|.+. . ++|..... ..+..|.-++.++ +-+|.|-+...+.
T Consensus 59 ln~~--G~-Da~TlGNHefD~g~--~-~~~~l~~~~~v~~aN~p~~~~~~~~g~g~~I~e~~G~kIgVIgl~g~~~f~~~ 132 (281)
T 1t71_A 59 LKEA--GV-NYITMGNHTWFQKL--D-LAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPF 132 (281)
T ss_dssp HHHH--TC-CEEECCTTTTCCGG--G-HHHHTTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSS
T ss_pred HHhc--CC-CEEEEccCcccCCc--c-HHHHhhhcCEEeeccCCcccccccCCCCeEEEEECCEEEEEEEeeccccccCc
Confidence 4433 22 24677999997431 1 1223222 1 22221100 0234567788877 4555555443122
Q ss_pred CcHHHHHHHHHHHhhcccCCCCEEEEEeCCcccccCCCcccchHHHHHHHHHHHHHcCCcEEEECcccCceeeeeccCCc
Q 008663 353 KSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYT 432 (558)
Q Consensus 353 ~~~~Q~~WL~~~L~~~~~~~~~wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~v~~~~ 432 (558)
.-..-.+.+++.++ +.+++.+|+.+|.-. ....+.+.. .-.-+||+|+.||+|.......
T Consensus 133 ~~~~pf~~a~~~v~---~~~~diIIv~~H~g~-----------t~Ek~~la~-~~dg~VD~VvGgHTHv~t~d~~----- 192 (281)
T 1t71_A 133 KTTNPFKVLKELIL---KRDCDLHIVDFHAET-----------TSEKNAFCM-AFDGYVTTIFGTHTHVPSADLR----- 192 (281)
T ss_dssp CBCCHHHHHHHHHT---TCCCSEEEEEEECSC-----------HHHHHHHHH-HHTTTSSEEEEESSSSCCTTCE-----
T ss_pred cccCHHHHHHHHHh---hcCCCEEEEEeCCCc-----------hHHHHHHHH-hCCCCeEEEEeCCCCcCCCceE-----
Confidence 11222444555555 345778999999521 111122222 1233699999999997643221
Q ss_pred cCCCCcEEEE-eCCCccc
Q 008663 433 LDPCGPVHIT-VGDGGNR 449 (558)
Q Consensus 433 ~~~~g~vyiv-~G~gG~~ 449 (558)
+-++|+.||+ .|..|..
T Consensus 193 il~~gt~~i~d~G~~G~y 210 (281)
T 1t71_A 193 ITPKGSAYITDVGMCGPG 210 (281)
T ss_dssp ECTTSCEEESCCCEEBCC
T ss_pred EecCCcEEEecCccccCC
Confidence 1347888887 3444443
No 41
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=97.95 E-value=0.00016 Score=71.08 Aligned_cols=189 Identities=17% Similarity=0.199 Sum_probs=98.7
Q ss_pred eEEEEEecCCCCCCh---HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCccccccCCCCCCccchhHHHHHHHHhhh
Q 008663 209 SRIAIVGDVGLTYNT---TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQ 285 (558)
Q Consensus 209 ~rfavigD~g~~~~~---~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y~~~wd~~~~~l~ 285 (558)
+||+++||.=..... ...+.++.+.. |++|..|+.+. .|.. +. + ...+.|.
T Consensus 1 m~ilf~GDv~g~~G~~~~~~~l~~lr~~~-d~vi~nge~~~------~G~g------------~~---~----~~~~~l~ 54 (255)
T 1t70_A 1 MRVLFIGDVFGQPGRRVLQNHLPTIRPQF-DFVIVNMENSA------GGFG------------MH---R----DAARGAL 54 (255)
T ss_dssp CEEEEECCBBHHHHHHHHHHHHHHHGGGC-SEEEEECTBTT------TTSS------------CC---H----HHHHHHH
T ss_pred CEEEEEeccCChHHHHHHHHHHHHHHhhC-CEEEECCCCcc------CCcC------------CC---H----HHHHHHH
Confidence 489999997422211 22345555555 99988888774 2321 11 1 1223344
Q ss_pred hhhccCCceeecCCCccccCccchhhHhhhhccC----CCCCC--CCCCCceEEEEEeCe--EEEEEEcCcccCCCcHHH
Q 008663 286 PVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFA----FPSKE--SGSLSKFYYSFNAGG--IHFLMLAAYVSFDKSGDQ 357 (558)
Q Consensus 286 ~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~----~P~~~--~~~~~~~yYsf~~G~--v~fI~LDt~~~~~~~~~Q 357 (558)
.+ .+- .++.||||+... ....|.+... .|.+- .+..+..|.-++.++ +-+|.|-+......-..-
T Consensus 55 ~~--G~D-a~TlGNHefD~~----~l~~~l~~~~~~~~~~aN~~~~~~pg~g~~I~~~~G~kIgVigl~g~~~~~~~~~p 127 (255)
T 1t70_A 55 EA--GAG-CLTLGNHAWHHK----DIYPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNP 127 (255)
T ss_dssp HH--TCS-EEECCTTTTSST----THHHHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCH
T ss_pred hC--CCC-EEEeccccccCc----hHHHHHhhCCCcEEEEeccCCCCCCCCCeEEEEECCEEEEEEEeecCcCcccccCH
Confidence 33 333 456799999742 2223322211 23221 122345666788876 455555454221122222
Q ss_pred HHHHHHHHhhcccCCCCEEEEEeCCcccccCCCcccchHHHHHHHHHHHHHcCCcEEEECcccCceeeeeccCCccCCCC
Q 008663 358 YKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYTLDPCG 437 (558)
Q Consensus 358 ~~WL~~~L~~~~~~~~~wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~v~~~~~~~~g 437 (558)
.+-+++.+++. +.+.+|+.+|.=. ....+.+.. ..+-+||+|+.||+|...-... +-++|
T Consensus 128 ~~~~~~~v~~l---~~d~IIv~~H~e~-----------t~Ek~~la~-~~dg~vd~VvGgHTHv~~~d~~-----il~~g 187 (255)
T 1t70_A 128 FRTMDALLERD---DLGTVFVDFHAEA-----------TSEKEAMGW-HLAGRVAAVIGTHTHVPTADTR-----ILKGG 187 (255)
T ss_dssp HHHHHHHTTCS---SCCEEEEEEECSC-----------HHHHHHHHH-HHTTSSSEEEEESSCSCBSCCE-----EETTT
T ss_pred HHHHHHHHHHh---CCCEEEEEeCCCC-----------hHHHHHHHH-hCCCCeEEEEeCCCCcCCCceE-----EcCCC
Confidence 33455666554 4667999999411 111122222 2233699999999997544321 12478
Q ss_pred cEEEE-eCCCcccC
Q 008663 438 PVHIT-VGDGGNRE 450 (558)
Q Consensus 438 ~vyiv-~G~gG~~~ 450 (558)
+.||+ .|..|...
T Consensus 188 t~~i~d~G~~G~y~ 201 (255)
T 1t70_A 188 TAYQTDAGFTGPHD 201 (255)
T ss_dssp EEEESCCCCBEESS
T ss_pred eEEEEcCcccccCc
Confidence 88877 46666543
No 42
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=97.84 E-value=0.00016 Score=74.24 Aligned_cols=58 Identities=22% Similarity=0.278 Sum_probs=32.3
Q ss_pred HHHHHHhhcccCCCCEEEEEeCCcccccCCCcccchHHHHHHHHHHHHH-cCCcEEEECcccCc
Q 008663 360 WLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYK-YGVDVVFNGHVHAY 422 (558)
Q Consensus 360 WL~~~L~~~~~~~~~wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~-~~VdlvlsGH~H~y 422 (558)
.+++.+++.++.+...+|+++|............+.. ...|.++ -+||++|.||.|..
T Consensus 195 ~~~~~v~~Lk~~g~D~II~l~H~G~~~d~~~~~~e~~-----~~~lA~~v~giD~IigGHsH~~ 253 (341)
T 3gve_A 195 SANETIPKMKAEGADVIIALAHTGIEKQAQSSGAENA-----VFDLATKTKGIDAIISGHQHGL 253 (341)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECCCCCSSCCCTTCSSC-----HHHHHHHCSCCCEEEECSSCCE
T ss_pred HHHHHHHHHHhcCCCEEEEEeccCccccccccccchh-----HHHHHhcCCCCcEEEECCCCcc
Confidence 3444444433345778999999876432211011110 1122223 37999999999975
No 43
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=97.55 E-value=0.0012 Score=67.54 Aligned_cols=40 Identities=18% Similarity=0.156 Sum_probs=27.9
Q ss_pred CCeEEEEEecCCCCCCh-----------------HHHHHHHHhCCCC-EEEEcCCccc
Q 008663 207 YPSRIAIVGDVGLTYNT-----------------TSTVSHMISNRPD-LILLVGDVTY 246 (558)
Q Consensus 207 ~~~rfavigD~g~~~~~-----------------~~~l~~l~~~~pD-fvl~~GDl~Y 246 (558)
..++|++.+|+|..... ...++++.+..++ ++|..||++.
T Consensus 7 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~n~llld~GD~~q 64 (339)
T 3jyf_A 7 VDLRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEVKNSVLVDNGDVIQ 64 (339)
T ss_dssp EEEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTCSCEEEEECSCCSS
T ss_pred eeEEEEEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHhhCCCEEEEECCCCCC
Confidence 36899999999974311 2245555556665 7789999995
No 44
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=97.50 E-value=0.0012 Score=71.85 Aligned_cols=173 Identities=18% Similarity=0.247 Sum_probs=87.9
Q ss_pred CCeEEEEEecCCCCCC------------------hH---HHHHHHHhCCCC-EEEEcCCcccccccccCCCCCccccccC
Q 008663 207 YPSRIAIVGDVGLTYN------------------TT---STVSHMISNRPD-LILLVGDVTYANLYLTNGTGSDCYACSF 264 (558)
Q Consensus 207 ~~~rfavigD~g~~~~------------------~~---~~l~~l~~~~pD-fvl~~GDl~Y~d~~~~~G~~~~~~~~~~ 264 (558)
+.++|++.+|+|.... .. ..++++.+.+++ ++|..||++....+
T Consensus 2 f~LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~n~llldaGD~~qGs~~-------------- 67 (530)
T 4h1s_A 2 WELTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIW-------------- 67 (530)
T ss_dssp CEEEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHH--------------
T ss_pred EEEEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCcCeEEEEeCCcccchHH--------------
Confidence 3589999999995421 11 234555555665 67889999953211
Q ss_pred CCCCCccchhHHHHHHHHhhhhhhccCCceeecCCCccccCccchhh-HhhhhccCCCCCCC------------CCCCce
Q 008663 265 ANSPIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTF-VAYTSRFAFPSKES------------GSLSKF 331 (558)
Q Consensus 265 ~~~~~~e~Y~~~wd~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~-~~y~~~f~~P~~~~------------~~~~~~ 331 (558)
...+ +.....+.|+.+ -.=.+++||||+.... ..+ ..+.+...+|--.. ...-..
T Consensus 68 -----~~~~--~g~~~i~~mN~l---gyDa~~lGNHEFd~G~--~~l~~~~~~~a~fp~L~aNv~~~~~~~~~~~~~~~p 135 (530)
T 4h1s_A 68 -----FTVY--KGAEVAHFMNAL---RYDAMALGNHEFDNGV--EGLIEPLLKEAKFPILSANIKAKGPLASQISGLYLP 135 (530)
T ss_dssp -----HHHH--TTHHHHHHHHHT---TCCEEECCGGGGTTTT--HHHHTTTTTTCSSCEECTTEEECTTHHHHHTTTSBS
T ss_pred -----HHHh--CChHHHHHHhcc---CCCEEEEchhhhccCH--HHHHHHHHhhCCCCEEEEeeeccCCcccccCCcccc
Confidence 1111 111223344443 2236789999996321 112 12222223332110 011234
Q ss_pred EEEEEeCeEE--EEEEcCcc-----c------CCCcHHHHHHHHHHHhhcccCCCCEEEEEeCCcccccCCCcccchHHH
Q 008663 332 YYSFNAGGIH--FLMLAAYV-----S------FDKSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECM 398 (558)
Q Consensus 332 yYsf~~G~v~--fI~LDt~~-----~------~~~~~~Q~~WL~~~L~~~~~~~~~wvIv~~H~P~y~s~~~~~~~~~~~ 398 (558)
|.-++.++++ ||.+-+.. . +...-+..+...++|++ .+..-+|+++|.-+.. .
T Consensus 136 y~I~~~~g~kIgviGltt~~~~~~~~~~~~~~f~d~v~~~~~~v~~Lr~---~g~D~II~LsH~G~~~--------d--- 201 (530)
T 4h1s_A 136 YKVLPVGDEVVGIVGYTSKETPFLSNPGTNLVFEDEITALQPEVDKLKT---LNVNKIIALGHSGFEM--------D--- 201 (530)
T ss_dssp EEEEEETTEEEEEEEEECTTHHHHSCCCTTEEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHH--------H---
T ss_pred eEEEEeccEEEeeccccccceeeeccCCCCcccCcHHHHHHHHHhhhhh---cCCCEEEEeccCCchH--------H---
Confidence 6677888754 45554421 0 11112223333334443 3456699999975311 0
Q ss_pred HHHHHHHHHHc-CCcEEEECcccCce
Q 008663 399 RVAMEDLLYKY-GVDVVFNGHVHAYE 423 (558)
Q Consensus 399 r~~l~~ll~~~-~VdlvlsGH~H~ye 423 (558)
..+.++. +||++|.||.|.+-
T Consensus 202 ----~~la~~v~giD~IlgGHsH~~~ 223 (530)
T 4h1s_A 202 ----KLIAQKVRGVDVVVGGHSNTFL 223 (530)
T ss_dssp ----HHHHHHSTTCCEEECCSSCCCB
T ss_pred ----HHHHhcCCCCCeeccCCcccee
Confidence 1233343 79999999999753
No 45
>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.75 E-value=0.014 Score=48.60 Aligned_cols=96 Identities=19% Similarity=0.249 Sum_probs=58.8
Q ss_pred CCCCeEEEEecC-CCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCC--ceEEEeEEEEeeeecccCCccccc
Q 008663 84 FEPEQISVSLSS-AHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQL--NRKATGRSLVYSQLYPFLGLQNYT 160 (558)
Q Consensus 84 ~~P~qi~lt~~~-~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~--~~~~~g~~~~y~~~~~~~g~~~~~ 160 (558)
..|..+.+.... .++++.|+|.......|. + ..=.|+|....+.. ..... ..
T Consensus 10 ~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~-i-------~~Y~v~~~~~~~~~~~~~~~~----~~------------- 64 (114)
T 2ede_A 10 SAPKDLTVITREGKPRAVIVSWQPPLEANGK-I-------TAYILFYTLDKNIPIDDWIME----TI------------- 64 (114)
T ss_dssp SCCEEEEEEECSSCSSCEEEEEECCSSCSSC-C-------SEEEEEEESCSSSCTTTSEEE----EE-------------
T ss_pred CCCcceEEEEccCCCCEEEEEECCCCCCCCc-e-------eEEEEEEEeCCCCCccceEEE----EE-------------
Confidence 468888777653 478999999864321110 0 12346776543221 10100 00
Q ss_pred cCcEEEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCCCC
Q 008663 161 SGIIHHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDSSS 204 (558)
Q Consensus 161 ~~~~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~~~ 204 (558)
.+....+.|++|+|+|.|.+||...+. +.+|+...|+|.+.+..
T Consensus 65 ~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp 111 (114)
T 2ede_A 65 SGDRLTHQIMDLNLDTMYYFRIQARNSKGVGPLSDPILFRTLKVSGP 111 (114)
T ss_dssp ETTCCEEEECSCCSSCEEEEEEEEECSSCBCCCCCCEEEECCCSSCC
T ss_pred CCCceEEEEcCCCCCCEEEEEEEEEeCCcCcCCcccEEEEecCCCCC
Confidence 112345789999999999999965432 36788899999877654
No 46
>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.53 E-value=0.011 Score=49.28 Aligned_cols=92 Identities=13% Similarity=0.131 Sum_probs=53.5
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccCcE
Q 008663 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (558)
Q Consensus 85 ~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~~ 164 (558)
.|..+.+......+++.|+|......-|..+ ..=.|+|....+..+..+. . +..
T Consensus 11 ~P~~~~~~~~~~~~sv~l~W~~P~~~~~~~i-------~~Y~v~~~~~~~~~~~~~~------~-------------~~~ 64 (110)
T 2crz_A 11 PCLPPRLQGRPKAKEIQLRWGPPLVDGGSPI-------SCYSVEMSPIEKDEPREVY------Q-------------GSE 64 (110)
T ss_dssp CCCCCEECSCCCSSEEEEECCCCSCCTTSCC-------CEEEEEEECTTSCCCEEEE------E-------------ESC
T ss_pred CCCCceeccccCCCEEEEEeCCCCCCCCcee-------EEEEEEEEeCCCCceEEEE------e-------------CCc
Confidence 4666666433346789999964321111101 1234677654433332221 0 012
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCC
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDS 202 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~ 202 (558)
..++|++|+|+|+|.|||...+. ..+|+...++|.+.+
T Consensus 65 ~~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~~~~~T~~~~ 105 (110)
T 2crz_A 65 VECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAPGS 105 (110)
T ss_dssp SEEEEESCCTTCEEEECCEEECSSCBCCCCCCEEEECCCSC
T ss_pred EEEEECCcCCCCEEEEEEEEEcCCccCCCCCccccccCCCC
Confidence 24578999999999999965432 367888889987654
No 47
>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=96.47 E-value=0.024 Score=47.53 Aligned_cols=40 Identities=18% Similarity=0.162 Sum_probs=31.4
Q ss_pred EEEEeCCCCCCCEEEEEEecCC---CCCccceeEEEcCCCCCC
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPS---IPAMSGTYCFRTMPDSSS 204 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~P~~~~ 204 (558)
..++|++|+|+|.|.+||...+ .+.+|+...++|.+.+.+
T Consensus 69 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~~~~p 111 (114)
T 1x4y_A 69 YWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETKARSGP 111 (114)
T ss_dssp CEEEECSCCTTCEEEEEEEEECTTCCCCCCCCEEEECCCCCCS
T ss_pred eEEEcCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCCCCC
Confidence 3578999999999999996433 236888999999876544
No 48
>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.41 E-value=0.01 Score=49.21 Aligned_cols=37 Identities=27% Similarity=0.345 Sum_probs=29.5
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCC
Q 008663 166 HVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDS 202 (558)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~ 202 (558)
.+.|+||+|+|.|.|||...+. ..+|+...++|.+..
T Consensus 62 ~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~v~~~T~~~~ 101 (106)
T 1x4x_A 62 SYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPPSS 101 (106)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCCCCBCCCEEEECCCCC
T ss_pred eEEEcCCCCCCEEEEEEEEEcCCcCCCCcCCEEEECCCCC
Confidence 4678999999999999975432 357888999998764
No 49
>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.30 E-value=0.06 Score=46.10 Aligned_cols=37 Identities=27% Similarity=0.263 Sum_probs=30.2
Q ss_pred EEEEeCCCCCCCEEEEEEecCC---CCCccceeEEEcCCC
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPS---IPAMSGTYCFRTMPD 201 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~P~ 201 (558)
..+.|+||+|+|.|.++|...+ .+.||....|+|.+.
T Consensus 78 ~~~~v~gL~P~T~Y~f~V~A~n~~g~g~~S~~v~~~T~~~ 117 (123)
T 2edd_A 78 LSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEA 117 (123)
T ss_dssp SEEEEESCCTTCEEEEEEEECCSSSCCCCCCCEEEECCCS
T ss_pred eEEEecCCCCCCEEEEEEEEeCCCcccCCCCCEEEEccCC
Confidence 3578999999999999996543 237888999999876
No 50
>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.25 E-value=0.024 Score=46.98 Aligned_cols=39 Identities=26% Similarity=0.308 Sum_probs=31.4
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCCCC
Q 008663 166 HVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDSSS 204 (558)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~~~ 204 (558)
.+.|++|+|+|+|.+||...+. +.+|+...|+|.+.+++
T Consensus 67 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~p 108 (111)
T 1x5l_A 67 RATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETGKPSGP 108 (111)
T ss_dssp EEEECSCCTTCEEEECEEEEETTEECCCCCCEEEECCCTTSC
T ss_pred EEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEEcCCCCCC
Confidence 5688999999999999965332 36889999999887654
No 51
>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1
Probab=96.16 E-value=0.021 Score=47.21 Aligned_cols=36 Identities=31% Similarity=0.427 Sum_probs=29.0
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCC
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMP 200 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P 200 (558)
..+.|++|+|+|.|.+||...+. +.+|+...|+|.|
T Consensus 66 ~~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~T~p 104 (105)
T 2haz_A 66 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 104 (105)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred cEEEECCCCCCCEEEEEEEEEcCCccCCCcCCEeeEEec
Confidence 35689999999999999965432 3678889999987
No 52
>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.15 E-value=0.067 Score=44.83 Aligned_cols=93 Identities=19% Similarity=0.242 Sum_probs=56.1
Q ss_pred CCCeEEEEecCCCCceEEEEEcCc-ccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccCc
Q 008663 85 EPEQISVSLSSAHDSVWISWITGE-FQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (558)
Q Consensus 85 ~P~qi~lt~~~~p~s~~V~W~T~~-~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~ 163 (558)
.|..+.+... ..+++.|+|.-.. ...| .+ ..=.|+|....+...... . . ...-
T Consensus 20 ~P~~l~~~~~-~~~sv~l~W~~p~~~~~g-~i-------~~Y~v~~~~~~~~~~~~~-------~-~---------~~~~ 73 (120)
T 1x5f_A 20 APRDVVASLV-STRFIKLTWRTPASDPHG-DN-------LTYSVFYTKEGIARERVE-------N-T---------SHPG 73 (120)
T ss_dssp CCEEEEEEEE-CSSCEEEEEECCSSCSSC-CS-------SEEEEEEEETTCCCCEEE-------E-C---------SSTT
T ss_pred CCCCcEEEec-CCCEEEEEECCCCCCCCC-cE-------EEEEEEEEECCCCCceEE-------E-e---------ccCC
Confidence 5777776544 3689999998643 1111 00 123467766543222110 0 0 0112
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCC---CccceeEEEcCCCCC
Q 008663 164 IHHVRLTGLKPDTLYHYQCGDPSIP---AMSGTYCFRTMPDSS 203 (558)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~P~~~ 203 (558)
...+.|++|+|+|.|.+||...+.. .+|+...|+|.+...
T Consensus 74 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~p 116 (120)
T 1x5f_A 74 EMQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPESG 116 (120)
T ss_dssp CSEEEECSCCTTCEEEEEEEEECSSCEEEECCCEEEECCCCCC
T ss_pred ccEEEeCCCCCCCEEEEEEEEECCCccCCCCCCEEEEeCCCCC
Confidence 3457899999999999999764432 568888999977543
No 53
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=96.06 E-value=0.0028 Score=62.39 Aligned_cols=38 Identities=24% Similarity=0.355 Sum_probs=25.3
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHhCCC-CEEEEcCCccc
Q 008663 209 SRIAIVGDVGLTYNT-TSTVSHMISNRP-DLILLVGDVTY 246 (558)
Q Consensus 209 ~rfavigD~g~~~~~-~~~l~~l~~~~p-Dfvl~~GDl~Y 246 (558)
.|++++||+|..... .+.++.+....+ |.+|++||++.
T Consensus 19 ~~i~visDiHg~~~~l~~~l~~~~~~~~~d~ii~~GD~vd 58 (262)
T 2qjc_A 19 GRVIIVGDIHGCRAQLEDLLRAVSFKQGSDTLVAVGDLVN 58 (262)
T ss_dssp SCEEEECCCTTCHHHHHHHHHHHTCCTTTSEEEECSCCSS
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHhccCCCCEEEEecCCCC
Confidence 489999999954211 123333333344 99999999995
No 54
>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.86 E-value=0.044 Score=45.31 Aligned_cols=37 Identities=24% Similarity=0.273 Sum_probs=29.0
Q ss_pred EEEeCCCCCCCEEEEEEecCCCC---CccceeEEEcCCCC
Q 008663 166 HVRLTGLKPDTLYHYQCGDPSIP---AMSGTYCFRTMPDS 202 (558)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~P~~ 202 (558)
.++|++|+|+|.|.|||...+.. .+|+...++|.+..
T Consensus 65 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 104 (109)
T 1x5x_A 65 AYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPDS 104 (109)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCEEEECCCEEEECCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCCCcCCccCEEeEeCCCC
Confidence 45789999999999999765533 46778889998754
No 55
>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.85 E-value=0.012 Score=48.05 Aligned_cols=35 Identities=40% Similarity=0.510 Sum_probs=26.8
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCC
Q 008663 166 HVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMP 200 (558)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P 200 (558)
.+.|+||+|+|.|.+||...+. +.+|+...|+|.|
T Consensus 65 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~p 102 (103)
T 2edy_A 65 RFTLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRTMP 102 (103)
T ss_dssp CCEECSCCTTCCEEEECCEECSSCBCCCCCCCCCCCCC
T ss_pred eEEEcCCCCCCEEEEEEEEECCCCCCCCCCCEEEEecc
Confidence 3478999999999999965432 3577777888865
No 56
>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.82 E-value=0.033 Score=45.95 Aligned_cols=39 Identities=33% Similarity=0.697 Sum_probs=30.4
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCCC
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDSS 203 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~~ 203 (558)
..+.|++|+|+|.|.+||...+. +.+|+...|+|.+...
T Consensus 63 ~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~ 104 (108)
T 2djs_A 63 NTARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTDSG 104 (108)
T ss_dssp SEEEEESCCTTCEEEEEEEEEESSCEEEECCCEEEECCCSSC
T ss_pred cEEEEcCCCCCCEEEEEEEEEeCCEECCCCCCEEEEeCCCCc
Confidence 35678999999999999965432 2578889999987654
No 57
>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}
Probab=95.81 E-value=0.058 Score=44.51 Aligned_cols=89 Identities=17% Similarity=0.244 Sum_probs=53.9
Q ss_pred CCCeEEEEec-CCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccCc
Q 008663 85 EPEQISVSLS-SAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (558)
Q Consensus 85 ~P~qi~lt~~-~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~ 163 (558)
.|..+.+... ...+++.|+|.-.....|. + ..=.|+|....+..+..... .
T Consensus 10 ~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~-i-------~~Y~v~~~~~~~~~~~~~~~------------------~-- 61 (108)
T 2dm4_A 10 APRNLQLSLPREAEGVIVGHWAPPIHTHGL-I-------REYIVEYSRSGSKMWASQRA------------------A-- 61 (108)
T ss_dssp SCEEEEEECCTTCSSCEEEEEECCSCCSSC-E-------EEEEEEEEETTCSCCEEEEE------------------S--
T ss_pred CCcCeEEEEeccCCCEEEEEEcCCCCCCCc-E-------EEEEEEEEECCCCCeEEecC------------------C--
Confidence 5788877654 3568999999864311110 0 11235565544432222100 0
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCC
Q 008663 164 IHHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPD 201 (558)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~ 201 (558)
...+.|++|+|+|.|.+||...+. ..+|+...++|.+.
T Consensus 62 ~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 102 (108)
T 2dm4_A 62 SNFTEIKNLLVNTLYTVRVAAVTSRGIGNWSDSKSITTIKG 102 (108)
T ss_dssp SSEEEECSCCSSCEEEEEEEEEESSCEEEECCCEEEECCSC
T ss_pred ccEEEeCCCCCCCEEEEEEEEECCCceeCCCCCEEEECCCC
Confidence 125689999999999999965432 25788889999653
No 58
>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.76 E-value=0.036 Score=46.76 Aligned_cols=95 Identities=24% Similarity=0.327 Sum_probs=54.3
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccCc
Q 008663 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (558)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~ 163 (558)
..|.+|++.--. .+++.|+|.-.....+..+. ....=.|+|......... +.. ...-
T Consensus 10 ~~P~~l~~~~~s-~tsi~lsW~~p~~~~~~~~~----~~~~Y~v~y~~~~~~~~~--------~~~----------~~~~ 66 (113)
T 1x5j_A 10 MPPVGVQASILS-HDTIRITWADNSLPKHQKIT----DSRYYTVRWKTNIPANTK--------YKN----------ANAT 66 (113)
T ss_dssp CCCEEEEEEEEE-TTEEEEEEECTTSCSSSCCC----SSCEEEEEECBSSSSSCC--------CEE----------CCBC
T ss_pred CCCcceEEEEec-CCEEEEEecCCCCccccccC----cCceEEEEEEECCCCCeE--------EEE----------EecC
Confidence 458888765433 78999999864321110000 001234667652111000 000 0011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCC
Q 008663 164 IHHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPD 201 (558)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~ 201 (558)
...+.|+||+|+|.|.++|...+. +.+|....++|.+.
T Consensus 67 ~~~~~i~gL~P~T~Y~f~V~A~~~~G~g~~S~~v~~~T~~~ 107 (113)
T 1x5j_A 67 TLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 107 (113)
T ss_dssp SSEEEEESCCTTCEECCEEEEECSSCBCCCCCCCCEECCCS
T ss_pred cCEEEeCCCCCCcEEEEEEEEecCCccCCCcccEEeeccCC
Confidence 236789999999999999965332 36888889999876
No 59
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}
Probab=95.76 E-value=0.0045 Score=61.63 Aligned_cols=38 Identities=21% Similarity=0.307 Sum_probs=24.4
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHh-CCCCEEEEcCCccc
Q 008663 209 SRIAIVGDVGLTYNT-TSTVSHMIS-NRPDLILLVGDVTY 246 (558)
Q Consensus 209 ~rfavigD~g~~~~~-~~~l~~l~~-~~pDfvl~~GDl~Y 246 (558)
+|++++||+|..... ...++.+.. .++|.+|++||++.
T Consensus 1 M~i~vigDiHG~~~~l~~ll~~~~~~~~~d~~v~lGD~vd 40 (280)
T 2dfj_A 1 MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVA 40 (280)
T ss_dssp -CEEEECCCCSCHHHHHHHHHHTTCCTTTCEEEECSCCSS
T ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCCCEEEEeCCcCC
Confidence 368999999965321 122222222 35799999999995
No 60
>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.69 E-value=0.084 Score=43.24 Aligned_cols=89 Identities=16% Similarity=0.104 Sum_probs=53.6
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccCcE
Q 008663 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (558)
Q Consensus 85 ~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~~ 164 (558)
.|.++.+... ..+++.|+|.......|. ...=.|+|............. . .
T Consensus 10 ~P~~l~~~~~-~~~si~l~W~~p~~~~g~--------i~~Y~v~~~~~~~~~~~~~~~------------------~--~ 60 (106)
T 2ed8_A 10 PVENLQAVST-SPTSILITWEPPAYANGP--------VQGYRLFCTEVSTGKEQNIEV------------------D--G 60 (106)
T ss_dssp CCEEEEEECS-STTEEEEEEECCSSCSSC--------CCEEEEEEEETTTCCEEEEEE------------------C--S
T ss_pred CCceeEEEec-CCCEEEEEECCCCCCCCC--------eeEEEEEEEECCCCceEEEeC------------------C--c
Confidence 5777776543 368999999864321110 112346676544332211100 0 1
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC---CccceeEEEcCCCC
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPSIP---AMSGTYCFRTMPDS 202 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~P~~ 202 (558)
..+.|++|+|+|.|.+||...+.. .+|+...|+|....
T Consensus 61 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 101 (106)
T 2ed8_A 61 LSYKLEGLKKFTEYSLRFLAYNRYGPGVSTDDITVVTLSDS 101 (106)
T ss_dssp SCEEEESCCTTCEEEEEEEEECSSCEEEECCCEEEECCCCC
T ss_pred cEEEECCCCCCCEEEEEEEEEeCCccCCCcCCEEEEcCCCC
Confidence 245789999999999999765432 56788899997654
No 61
>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.60 E-value=0.15 Score=43.26 Aligned_cols=38 Identities=8% Similarity=0.019 Sum_probs=29.9
Q ss_pred EEEeCCCCCCCEEEEEEecCC---CCCccceeEEEcCCCCC
Q 008663 166 HVRLTGLKPDTLYHYQCGDPS---IPAMSGTYCFRTMPDSS 203 (558)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~P~~~ 203 (558)
.+.|++|+|+|.|.+||...+ .+.+|+...|+|.+...
T Consensus 80 ~~~l~~L~p~t~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~~~ 120 (124)
T 2dbj_A 80 RARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFIPAHSG 120 (124)
T ss_dssp CEEEECCCSSSEEEECEEEEESSCBCCCCCCEEEECCCSCC
T ss_pred eEEecCCCCCCEEEEEEEEECCCccCCCCCCEEEEcCCCCC
Confidence 567899999999999996433 23688999999987643
No 62
>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.59 E-value=0.11 Score=43.50 Aligned_cols=39 Identities=28% Similarity=0.210 Sum_probs=30.4
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCCC
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDSS 203 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~~ 203 (558)
..+.|+||+|+|.|.+||...+. +.+|+...|+|.+.+.
T Consensus 74 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~p 115 (119)
T 2ee2_A 74 YSARLENLLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKASG 115 (119)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSSCCCCCCCEEEECCCCCC
T ss_pred eEEEECCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCCCCC
Confidence 36789999999999999965432 3678888999976654
No 63
>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.54 E-value=0.071 Score=44.38 Aligned_cols=89 Identities=17% Similarity=0.188 Sum_probs=52.9
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccCcE
Q 008663 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (558)
Q Consensus 85 ~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~~ 164 (558)
.|..+++.-. ..+++.|+|.......|. ...=.|+|..........+.. ..
T Consensus 20 ~P~~l~~~~~-~~~si~l~W~~p~~~~~~--------i~~Y~v~~~~~~~~~~~~~~~--------------------~~ 70 (116)
T 1x5g_A 20 PAPNLRAYAA-SPTSITVTWETPVSGNGE--------IQNYKLYYMEKGTDKEQDVDV--------------------SS 70 (116)
T ss_dssp CCSSCEEEEE-ETTEEEEECCCCSCCSSC--------CSEEEEEEEETTCCCCCCEEE--------------------CS
T ss_pred CCCccEEEec-CCCEEEEEEeCCCCCCCc--------ccEEEEEEEECCCCccEEEec--------------------CC
Confidence 5666766433 367999999764321110 012346665544322211100 12
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCC
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDS 202 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~ 202 (558)
..+.|+||+|+|.|.+||...+. +.+|+...|+|.+..
T Consensus 71 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 111 (116)
T 1x5g_A 71 HSYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSDS 111 (116)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSCCCCBCCCCCEECCCSS
T ss_pred ceEEEcCCCCCCEEEEEEEEEcCCCcCCCCCCEEEECCCCC
Confidence 35678999999999999965432 357888899998654
No 64
>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.50 E-value=0.073 Score=44.15 Aligned_cols=38 Identities=37% Similarity=0.524 Sum_probs=29.8
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC---CccceeEEEcCCCC
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPSIP---AMSGTYCFRTMPDS 202 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~P~~ 202 (558)
..+.|+||+|+|.|.+||...+.. .+|+...|+|.+..
T Consensus 70 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 110 (115)
T 1x5z_A 70 TSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSS 110 (115)
T ss_dssp SEEEEECCCTTCEEEECEEEECSSCEEEECCCEEEECCCCC
T ss_pred cEEEECCCCCCCeEEEEEEEECCCcccCCCcCEEEecCCCC
Confidence 356789999999999999754432 57788899998764
No 65
>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.49 E-value=0.15 Score=42.40 Aligned_cols=93 Identities=19% Similarity=0.224 Sum_probs=53.6
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccCc
Q 008663 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (558)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~ 163 (558)
..|..+.+... ..+++.|+|.-.....|. ...=.|+|........... .. ...-
T Consensus 19 ~~P~~l~~~~~-~~~sv~l~W~~p~~~~~~--------i~~Y~v~~~~~~~~~~~~~-------~~----------~~~~ 72 (119)
T 2ed7_A 19 SAPRDVVPVLV-SSRFVRLSWRPPAEAKGN--------IQTFTVFFSREGDNRERAL-------NT----------TQPG 72 (119)
T ss_dssp CCCSCCEEEEE-CSSCEEEECCCCSCCSSC--------EEEEEEEEEESSCCCCEEE-------EC----------CCTT
T ss_pred cCCcceEEEec-CCCEEEEEEeCCCCCCCc--------EEEEEEEEEeCCCCcceee-------Ee----------ecCC
Confidence 35777766643 368999999753211000 0112355554433222111 00 0112
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC---CCCccceeEEEcCCCC
Q 008663 164 IHHVRLTGLKPDTLYHYQCGDPS---IPAMSGTYCFRTMPDS 202 (558)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~P~~ 202 (558)
...+.|++|+|+|+|.+||...+ ...+|+...++|.+..
T Consensus 73 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 114 (119)
T 2ed7_A 73 SLQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPES 114 (119)
T ss_dssp CCEEEECSCCSSSEEEECCEEEESSCBCSCCCCEEEECCCCS
T ss_pred ceEEEeCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCCC
Confidence 34578999999999999986432 2367888899998754
No 66
>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.46 E-value=0.058 Score=44.70 Aligned_cols=38 Identities=26% Similarity=0.199 Sum_probs=30.6
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCCC
Q 008663 166 HVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDSS 203 (558)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~~ 203 (558)
.+.|+||+|+|.|.+||...+. +.+|+...|+|.+...
T Consensus 65 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~ 105 (109)
T 2e7h_A 65 RAELRGLKRGASYLVQVRARSEAGYGPFGQEHHSQTQLDSG 105 (109)
T ss_dssp EEEEESCCTTSCEEEEEEEECSSCBCCCCSCEECCCCCCSS
T ss_pred EEEECCCCCCCeEEEEEEEEeCCccCCCCCCEEEEcCCCCC
Confidence 6688999999999999965432 3688889999987654
No 67
>3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens}
Probab=95.34 E-value=0.073 Score=56.43 Aligned_cols=138 Identities=17% Similarity=0.236 Sum_probs=77.2
Q ss_pred CeEEEEEecCCCCCCh-H--HH----HHHHH-----------hCCCCEEEEcCCcccccccccCCCCCccccccCCCCCC
Q 008663 208 PSRIAIVGDVGLTYNT-T--ST----VSHMI-----------SNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPI 269 (558)
Q Consensus 208 ~~rfavigD~g~~~~~-~--~~----l~~l~-----------~~~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~ 269 (558)
+.++++++|+|.+... . .. ++.|. ..+...+|++||.+.... ... +...
T Consensus 200 ~~~ialVSGL~igs~~~~~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~-----~~~--------e~~~ 266 (476)
T 3e0j_A 200 DRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHST-----QSR--------DSIN 266 (476)
T ss_dssp CCEEEEECCCCBTSSCHHHHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC----------------------
T ss_pred CCEEEEECCcccCCCcccchHHHHHHHHHHcCCCCCccccchhhceeEEEEECCcccccc-----ccc--------hhhh
Confidence 5699999999988653 2 11 22232 235788999999995421 100 0001
Q ss_pred ccch---------hHHHHHHHHhhhhhhccCCceeecCCCccccCccc-----h-hh---HhhhhccCCCCCCCCCCCce
Q 008663 270 HETY---------QPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAEN-----R-TF---VAYTSRFAFPSKESGSLSKF 331 (558)
Q Consensus 270 ~e~Y---------~~~wd~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~-----~-~~---~~y~~~f~~P~~~~~~~~~~ 331 (558)
...| ....+.+..++..+...+|+.+.|||||-....-. + -| ..|. .+. ...+.
T Consensus 267 ~~~y~~~~~~~~~~~~~~~ld~~L~~l~~~i~V~lmPG~~DP~~~~lPQqplh~~lfp~s~~~~-~~~-------~vtNP 338 (476)
T 3e0j_A 267 KAKYLTKKTQAASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYS-TLQ-------LVTNP 338 (476)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHTTSCEEEECCTTSSSCSSSSCCCCCTTSCHHHHTST-TEE-------ECCSS
T ss_pred hhhccccccchhhHHHHHHHHHHHHhcccCceEEecCCCCCcccccCCCCCcCHHHhhhhhhcC-ccE-------EeCCC
Confidence 1111 12344556677788889999999999998633211 0 01 1110 110 11222
Q ss_pred EEEEEeCeEEEEEEcCcc-----cCCCcHHHHHHHHHHHhh
Q 008663 332 YYSFNAGGIHFLMLAAYV-----SFDKSGDQYKWLEEDLAN 367 (558)
Q Consensus 332 yYsf~~G~v~fI~LDt~~-----~~~~~~~Q~~WL~~~L~~ 367 (558)
|.|++++++|++..... .|.....-++.|++.|+-
T Consensus 339 -~~~~i~G~~~LgtsGqnidDi~ky~~~~~~l~~me~~Lkw 378 (476)
T 3e0j_A 339 -YQATIDGVRFLGTSGQNVSDIFRYSSMEDHLEILEWTLRV 378 (476)
T ss_dssp -EEEEETTEEEEECSSHHHHHHHHHSCCCCHHHHHHHHHHB
T ss_pred -eEEEECCEEEEEECCCCHHHHHhcCCCCCHHHHHHHHHHH
Confidence 55999999999886531 122233456788888875
No 68
>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic}
Probab=95.29 E-value=0.11 Score=41.96 Aligned_cols=88 Identities=17% Similarity=0.151 Sum_probs=51.4
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccCcE
Q 008663 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (558)
Q Consensus 85 ~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~~ 164 (558)
.|.++.+.-.. .+++.|+|...... ...=.|+|....+...... ... ..-.
T Consensus 4 ~P~~l~v~~~~-~~sv~l~W~~p~~~-----------i~~Y~v~y~~~~~~~~~~~----~~~-------------~~~~ 54 (98)
T 3teu_A 4 APTDLQVTNVT-DTSITVSWTPPSAT-----------ITGYRITYTPSNGPGEPKE----LTV-------------PPSS 54 (98)
T ss_dssp CCEEEEEEEEC-SSCEEEEEECCSSC-----------CSEEEEEEEETTSCSCCEE----EEE-------------CTTC
T ss_pred CCCceEEEEec-CCEEEEEEeCCCCc-----------ccEEEEEEEECCCCCceEE----EEc-------------CCCc
Confidence 47777665333 68999999864211 0123477764432211110 000 0122
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCccceeEEEcCCC
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPSIPAMSGTYCFRTMPD 201 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~P~ 201 (558)
..+.|+||+|+|.|.+||...+..+.|+...+.+++.
T Consensus 55 ~~~~i~~L~p~t~Y~~~V~A~n~~G~s~p~~~~~~~~ 91 (98)
T 3teu_A 55 TSVTITGLTPGVEYVVSVYALKDNQESPPLVGTQTTG 91 (98)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECS
T ss_pred CEEEecCCCCCCEEEEEEEEEeCCCCCCCeEEEeccC
Confidence 3578999999999999997665556666555555543
No 69
>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.21 E-value=0.17 Score=42.35 Aligned_cols=89 Identities=17% Similarity=0.117 Sum_probs=51.6
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccCc
Q 008663 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (558)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~ 163 (558)
..|..+.++- -+.+++.|+|.-.... ...=.|+|....+.....+. + .+-
T Consensus 9 ~pP~~l~~~~-vt~tsi~vsW~pp~~~-----------i~~Y~I~y~~~~~~~~~~~~----v--------------~~~ 58 (108)
T 2ee3_A 9 APPRHLGFSD-VSHDAARVFWEGAPRP-----------VRLVRVTYVSSEGGHSGQTE----A--------------PGN 58 (108)
T ss_dssp CCSSCEEEES-CCSSCEEEEESCCSSC-----------CSEEEEEEEETTTCCBCCEE----E--------------ETT
T ss_pred CCCceEEEEE-ccCCeEEEEeeCCCCC-----------ccEEEEEEEeCCCCceeEEE----c--------------CCC
Confidence 4578887753 3468999999743211 11235777665432211110 0 111
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCccc--eeEEEcCCCC
Q 008663 164 IHHVRLTGLKPDTLYHYQCGDPSIPAMSG--TYCFRTMPDS 202 (558)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~P~~ 202 (558)
...+.|+||+|+|.|..+|..-...+.|. ...|+|.+.+
T Consensus 59 ~t~~~l~~L~p~T~Y~v~V~A~~~~g~s~p~~~~~~T~~vP 99 (108)
T 2ee3_A 59 ATSAMLGPLSSSTTYTVRVTCLYPGGGSSTLTGRVTTKKAP 99 (108)
T ss_dssp CCEEEECSCCSSCEEEEEEEEECTTSCEEEEEEEEECCCCC
T ss_pred cCEEEcCCCCCCCEEEEEEEEEeCCCcCCCccCEEEeCCCC
Confidence 23578999999999999996544334332 3468886433
No 70
>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.20 E-value=0.17 Score=43.02 Aligned_cols=39 Identities=23% Similarity=0.084 Sum_probs=29.8
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC---CCCccceeEEEcCCCC
Q 008663 164 IHHVRLTGLKPDTLYHYQCGDPS---IPAMSGTYCFRTMPDS 202 (558)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~P~~ 202 (558)
...+.|+||+|+|.|.+||...+ .+.+|....++|.+..
T Consensus 78 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 119 (134)
T 2edx_A 78 HSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDV 119 (134)
T ss_dssp CSEEEEESCCTTCEEEEEEEEEETTBCCCCCCCEEEECCCCS
T ss_pred ccEEEeCCCCCCCEEEEEEEEEcCCCcCCCCCCEEeecCCCC
Confidence 35678999999999999996433 2357888889997654
No 71
>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.19 E-value=0.11 Score=43.84 Aligned_cols=90 Identities=17% Similarity=0.179 Sum_probs=51.6
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccCcE
Q 008663 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (558)
Q Consensus 85 ~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~~ 164 (558)
.|..+.+... +++++.|+|.-....... .+ ...=.|+|....+...... . .+..
T Consensus 31 ~P~~l~~~~~-~~~sv~l~W~~p~~~~~~-----g~-i~~Y~v~~~~~~~~~~~~~------~-------------~~~~ 84 (124)
T 2ed9_A 31 PPQNVSLEVV-NSRSIKVSWLPPPSGTQN-----GF-ITGYKIRHRKTTRRGEMET------L-------------EPNN 84 (124)
T ss_dssp CCBSCCEEEE-ETTEEEEECBCCCTTTCC-----SC-CCEEEEEEEESSSSCCEEE------E-------------CSSC
T ss_pred CCeeeEEEEc-CCCEEEEEEECcCCcCCC-----cE-EeEEEEEEEECCCCcceEE------e-------------cCCc
Confidence 4666655433 367999999764321000 00 0123466665443322110 0 1122
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCC
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMP 200 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P 200 (558)
..+.|++|+|+|.|.+||...+. +.+|+...|+|..
T Consensus 85 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~e 123 (124)
T 2ed9_A 85 LWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPE 123 (124)
T ss_dssp SEEEEECCCSSCEEEECEEEECSSCBCCCCCCEEEECCC
T ss_pred CEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCC
Confidence 35688999999999999965432 3578888898864
No 72
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=95.13 E-value=0.013 Score=59.07 Aligned_cols=23 Identities=17% Similarity=0.112 Sum_probs=18.9
Q ss_pred HHHHHHHHHcCCcEEEECcccCc
Q 008663 400 VAMEDLLYKYGVDVVFNGHVHAY 422 (558)
Q Consensus 400 ~~l~~ll~~~~VdlvlsGH~H~y 422 (558)
+.....+.++++++++-||.-..
T Consensus 223 ~~~~~fl~~n~l~~iir~Hq~~~ 245 (309)
T 2ie4_C 223 DISETFNHANGLTLVSRAHQLVM 245 (309)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCT
T ss_pred HHHHHHHHHcCCeEEEecCccee
Confidence 46677888999999999997653
No 73
>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.10 E-value=0.092 Score=43.26 Aligned_cols=37 Identities=27% Similarity=0.231 Sum_probs=26.7
Q ss_pred EEEeCCCCCCCEEEEEEecCCCCCcc--ceeEEEcCCCC
Q 008663 166 HVRLTGLKPDTLYHYQCGDPSIPAMS--GTYCFRTMPDS 202 (558)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~~~~S--~~~~F~T~P~~ 202 (558)
.+.|+||+|+|+|.++|...+..+.| ....++|.|..
T Consensus 62 ~~~l~~L~p~t~Y~~~V~A~~~~~~s~p~~~~~~T~p~~ 100 (104)
T 2dkm_A 62 EVLLDGLEPGRDYEVSVQSLRGPEGSEARGIRARTPTSG 100 (104)
T ss_dssp EEEEESCCTTCCEEEEEEEECSSSBCCCEEEECCCCCCS
T ss_pred EEEECCCCCCCEEEEEEEEECCCCCCCCEEEEEEcCCCC
Confidence 78899999999999999765433333 34456777654
No 74
>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.09 E-value=0.2 Score=42.50 Aligned_cols=94 Identities=17% Similarity=0.197 Sum_probs=54.0
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccCcE
Q 008663 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (558)
Q Consensus 85 ~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~~ 164 (558)
.|..+.+... +.+++.|+|.......|. + ..=.|+|........... ... .....
T Consensus 30 ~P~~l~~~~~-~~~sv~l~W~~p~~~~g~-i-------~~Y~v~~~~~~~~~~~~~---~~~-------------~~~~~ 84 (130)
T 1wfo_A 30 PPMGILFPEV-RTTSVRLIWQPPAAPNGI-I-------LAYQITHRLNTTTANTAT---VEV-------------LAPSA 84 (130)
T ss_dssp CCCCCEEEEE-CSSEEEEECCCCSCCCSC-C-------CEEEEEEEESSCCCSCCC---EEE-------------ECTTC
T ss_pred CCCceEEEec-CCCEEEEEEcCCCCCCCc-e-------EEEEEEEEECCCCCceEE---EEE-------------eCCCc
Confidence 5777766544 368999999764321110 0 122466655432111000 000 01224
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC---CccceeEEEcCCCCC
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPSIP---AMSGTYCFRTMPDSS 203 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~P~~~ 203 (558)
..+.|++|+|+|.|.+||...+.. .+|....|+|.+...
T Consensus 85 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~p 126 (130)
T 1wfo_A 85 RQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKRSG 126 (130)
T ss_dssp CEEEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECCSSCCC
T ss_pred eEEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEecCCCCC
Confidence 467889999999999999765433 467777899976543
No 75
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=95.08 E-value=0.14 Score=47.24 Aligned_cols=95 Identities=18% Similarity=0.180 Sum_probs=54.3
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccCc
Q 008663 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (558)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~ 163 (558)
..|.++.+..... ++.|+|.-.....|..+ ..=.|+|.......+.... +... ..+.
T Consensus 10 ~~P~~~~~~~~~~--s~~l~W~~p~~~~g~~i-------~~Y~v~~~~~~~~~~~~~~-----~~~~---------~~~~ 66 (209)
T 2vkw_A 10 SSPSIDQVEPYSS--TAQVQFDEPEATGGVPI-------LKYKAEWRAVGEEVWHSKW-----YDAK---------EASM 66 (209)
T ss_dssp CCCEEEEEEECSS--CEEEEEECCSCCCSSCC-------CEEEEEEEESSCCCCEEEE-----EEHH---------HHHH
T ss_pred cCCcccEeeeccC--eEEEEEcCCCcCCCcce-------eEEEEEEeeCCCCCceEeE-----eecc---------CCCc
Confidence 3588887765543 69999987432112111 1234677655443332211 0000 0011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCC
Q 008663 164 IHHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPD 201 (558)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~ 201 (558)
.....|++|+|+|.|.|||...+. ..+|....|+|.+.
T Consensus 67 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~T~~~ 107 (209)
T 2vkw_A 67 EGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPV 107 (209)
T ss_dssp HSEEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECCCS
T ss_pred cceEEeCCCCCCCeEEEEEEEEcCCcccCCcccccccccCC
Confidence 235678999999999999965332 25677778998764
No 76
>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.08 E-value=0.14 Score=41.64 Aligned_cols=37 Identities=22% Similarity=0.170 Sum_probs=28.7
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCC
Q 008663 166 HVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDS 202 (558)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~ 202 (558)
.+.|++|+|+|.|.|||...+. ..+|+...++|.+..
T Consensus 62 ~~~i~~L~p~t~Y~~~V~A~n~~G~~~~S~~~~~~T~~~~ 101 (106)
T 2dju_A 62 RYSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQS 101 (106)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSCBCCCCCCEEEECCCSS
T ss_pred EEEEeCCCCCcEEEEEEEEEeCCccCCCcccEEeEcCCCC
Confidence 4578999999999999965432 257788889997754
No 77
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Probab=95.04 E-value=0.091 Score=44.63 Aligned_cols=83 Identities=20% Similarity=0.234 Sum_probs=48.6
Q ss_pred CCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccCcEEEEEeCCCCC
Q 008663 95 SAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGIIHHVRLTGLKP 174 (558)
Q Consensus 95 ~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~~h~v~l~gL~P 174 (558)
...+++.|+|.-.. .|. .|+ ..=.|+|.......+..+... ++....++|.||+|
T Consensus 19 ~~~~sv~L~W~p~~--dgg--sPI----~~Y~I~yr~~~~~~w~~~~~~-----------------~~~~~~~~l~~L~p 73 (114)
T 2kbg_A 19 SSGKSFKLSITKQD--DGG--API----LEYIVKYRSKDKEDQWLEKKV-----------------QGNKDHIILEHLQW 73 (114)
T ss_dssp CSTTCEEEEECCCC--CSS--SCC----SEEEEEEEESSCCSCCEEEEE-----------------ETTTCCEEECCCCT
T ss_pred cCCCEEEEEEECCC--CCC--Ccc----cEEEEEEEeCCCCCcEEeEEc-----------------CCCcCEEEEcCCCC
Confidence 45789999997532 121 111 123678887644333322110 01122467999999
Q ss_pred CCEEEEEEecCCCCCcc--ceeEEEcCCCC
Q 008663 175 DTLYHYQCGDPSIPAMS--GTYCFRTMPDS 202 (558)
Q Consensus 175 ~T~Y~Yrvg~~~~~~~S--~~~~F~T~P~~ 202 (558)
++.|.+||...+.-+.| ....|+|.+.+
T Consensus 74 ~t~Y~frV~A~N~~G~s~pS~~~~~T~~~~ 103 (114)
T 2kbg_A 74 TMGYEVQITAANRLGYSEPTVYEFSMPPKP 103 (114)
T ss_dssp TCCEEEEEEEECTTSCEEEEEEEECCCCCC
T ss_pred CCEEEEEEEEEeCCcCcCCcCCEEEcCCCC
Confidence 99999999865433433 34678886654
No 78
>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.03 E-value=0.043 Score=46.24 Aligned_cols=37 Identities=22% Similarity=0.122 Sum_probs=27.8
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCC
Q 008663 166 HVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDS 202 (558)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~ 202 (558)
+.++++|+|+|+|.|||...+. ..+|+...++|.+.+
T Consensus 76 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 115 (120)
T 2crm_A 76 EHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTPAVS 115 (120)
T ss_dssp EEEECSCCTTSCEEEEEEEEETTEECCCCCCCCCCCCCCS
T ss_pred EEEECCCCCCCEEEEEEEEEcCCccCCCcccEEEEcCCCC
Confidence 4578999999999999975442 256777778886543
No 79
>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.93 E-value=0.11 Score=43.45 Aligned_cols=95 Identities=17% Similarity=0.159 Sum_probs=54.9
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcc--cccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccc-ccc
Q 008663 85 EPEQISVSLSSAHDSVWISWITGEF--QIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQN-YTS 161 (558)
Q Consensus 85 ~P~qi~lt~~~~p~s~~V~W~T~~~--~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~-~~~ 161 (558)
.|..+.+... +.+++.|+|.-... ..|. ...=.|+|.......... +. ... ...
T Consensus 18 ~P~~~~~~~~-~~~sv~l~W~~p~~~~~~g~--------i~~Y~v~~~~~~~~~~~~-------~~-------~~~~~~~ 74 (122)
T 1va9_A 18 PPMDVTLQPV-TSQSIQVTWKAPKKELQNGV--------IRGYQIGYRENSPGSNGQ-------YS-------IVEMKAT 74 (122)
T ss_dssp CCEEEEEEEC-SSSEEEEEEECCCSSTTCSC--------CCEEEEEEEESSTTSCCS-------CB-------CCBCCCC
T ss_pred CCcceEEEec-cCCEEEEEEeCCCCcCCCCc--------EeEEEEEEEECCCCCCcc-------eE-------EEEEecC
Confidence 4777776433 47899999987542 1110 012245665543221100 00 000 012
Q ss_pred CcEEEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCC
Q 008663 162 GIIHHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDS 202 (558)
Q Consensus 162 ~~~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~ 202 (558)
+-...+.|++|+|+|.|.+||...+. +.+|+...|+|.+..
T Consensus 75 ~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 118 (122)
T 1va9_A 75 GDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLESG 118 (122)
T ss_dssp SSEEEEEEESCCSSCCEEEEEEEEETTEECCCCCCEECCCCSSC
T ss_pred CceeEEEeCCCCCCCEEEEEEEEEcCCCCCCCccCEEEEeCCCC
Confidence 33567889999999999999965432 357888889887653
No 80
>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens}
Probab=94.83 E-value=0.35 Score=39.32 Aligned_cols=79 Identities=18% Similarity=0.247 Sum_probs=46.2
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccCcE
Q 008663 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (558)
Q Consensus 85 ~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~~ 164 (558)
.|.++.+.- -+.+++.|+|.-.... ...=.|+|........... .. ..+-.
T Consensus 4 ~P~~l~~~~-~~~~sv~lsW~pP~~~-----------i~~Y~v~y~~~~~~~~~~~----~~-------------~~~~~ 54 (100)
T 3b83_A 4 PPFNIKVTN-ITLTTAVVTWQPPILP-----------IEGILVTFGRKNDPSDETT----VD-------------LTSSI 54 (100)
T ss_dssp CCEEEEEES-CCSSCEEEEEECCSSC-----------CSEEEEEEEESSCTTTCEE----EE-------------ECTTE
T ss_pred cCCccEEEE-ecCCEEEEEEcCCccc-----------CCEEEEEEEECCCCCCceE----EE-------------ECCcc
Confidence 477777654 3478999999753210 1123477765432211110 00 01234
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCccc
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPSIPAMSG 192 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~ 192 (558)
-.++|+||+|+|+|.+||...+..+.|+
T Consensus 55 t~~~i~~L~p~t~Y~~~V~A~n~~g~s~ 82 (100)
T 3b83_A 55 TSLTLTNLEPNTTYEIRIVARNGQQYSP 82 (100)
T ss_dssp EEEEECSCCTTCEEEEEEEEEETTEECC
T ss_pred eEEEECCCCCCCEEEEEEEEEeCCCCCC
Confidence 4678999999999999997655444444
No 81
>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.82 E-value=0.17 Score=43.05 Aligned_cols=38 Identities=16% Similarity=0.198 Sum_probs=30.0
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCC
Q 008663 164 IHHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPD 201 (558)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~ 201 (558)
...+.|++|+|+|.|.+||...+. +.+|+...|+|.+.
T Consensus 76 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 116 (132)
T 1x5h_A 76 QLSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFES 116 (132)
T ss_dssp CCEEEEECCCSSCEEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred ccEEEeCCCCCCCEEEEEEEEEcCCccCCCCcCEEeEcCcc
Confidence 456788999999999999975443 25788889999774
No 82
>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1
Probab=94.79 E-value=0.17 Score=40.10 Aligned_cols=33 Identities=24% Similarity=0.398 Sum_probs=22.0
Q ss_pred EEEeCCCCCCCEEEEEEecCCCC----CccceeEEEc
Q 008663 166 HVRLTGLKPDTLYHYQCGDPSIP----AMSGTYCFRT 198 (558)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~~----~~S~~~~F~T 198 (558)
...+++|+|+++|+|||..-+.. ..|....++|
T Consensus 52 ~~~~~~L~~~t~Y~~~V~A~n~~G~~s~~S~~v~v~T 88 (88)
T 1k85_A 52 TATISGLAADTSYTFTVKAKDAAGNVSAASNAVSVKT 88 (88)
T ss_dssp EEEECCCCSSCEEEEEEEEEETTTEECCCCCCEEEEC
T ss_pred EEEeCCCCCCCEEEEEEEEEeCCCCcCCCCCCEEEEC
Confidence 34689999999999999753321 2344555544
No 83
>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.78 E-value=0.1 Score=44.71 Aligned_cols=36 Identities=19% Similarity=0.225 Sum_probs=27.3
Q ss_pred EEEeCCCCCCCEEEEEEecCCCC--CccceeEEEcCCC
Q 008663 166 HVRLTGLKPDTLYHYQCGDPSIP--AMSGTYCFRTMPD 201 (558)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~~--~~S~~~~F~T~P~ 201 (558)
..+++||+|+|+|.|||...+.. ..|+...++|.+.
T Consensus 81 ~~~v~gL~p~t~Y~frV~A~N~~G~~~S~~v~~~T~~~ 118 (127)
T 2dmk_A 81 HYTVHGLQSGTRYIFIVKAINQAGSRNSEPTRLKTNSQ 118 (127)
T ss_dssp EEEEESCCSSCEEEEEEEEEESSCEEECCCEEEECCSS
T ss_pred eEEECCCCCCCEEEEEEEEEeCCCCCCCcCeEeEeCCC
Confidence 34788999999999999654422 4667788888764
No 84
>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.71 E-value=0.053 Score=45.25 Aligned_cols=38 Identities=18% Similarity=0.203 Sum_probs=29.6
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCCC
Q 008663 166 HVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDSS 203 (558)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~~ 203 (558)
.++|+||+|+|.|.|||...+. ..+|+...++|.+.+.
T Consensus 66 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~p~ 106 (110)
T 2db8_A 66 MCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEGSG 106 (110)
T ss_dssp CEEEECCCSSSCCEEEEEEECSSCBCCCCSCEECCCCCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCcCCCCCCCEEEEcCCCCC
Confidence 3568899999999999965443 2578888999987654
No 85
>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.70 E-value=0.4 Score=39.84 Aligned_cols=38 Identities=16% Similarity=0.093 Sum_probs=29.5
Q ss_pred EEEEeCCCCCCCEEEEEEecCC---CCCccceeEEEcCCCC
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPS---IPAMSGTYCFRTMPDS 202 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~P~~ 202 (558)
..+.|++|+|+|.|.+||...+ .+.+|+...|+|.+..
T Consensus 76 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 116 (121)
T 2dlh_A 76 QITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTGS 116 (121)
T ss_dssp SEECCBSCCSSCEEEEEEEEEESSCBCCCCCCEEEECCCCC
T ss_pred eEEEecCCCCCCEEEEEEEEEeCCccCCCCCCEEEECCCCC
Confidence 4568999999999999996433 2357888899997653
No 86
>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.69 E-value=0.16 Score=43.05 Aligned_cols=38 Identities=18% Similarity=0.273 Sum_probs=26.9
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC---Cccce-eEEEcCCCC
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPSIP---AMSGT-YCFRTMPDS 202 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~-~~F~T~P~~ 202 (558)
..++|++|+|+|.|.|||...+.. .+|.. ..++|.++.
T Consensus 79 ~~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~~T~~~~ 120 (124)
T 1wis_A 79 RSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQSG 120 (124)
T ss_dssp SEEEECSCCTTSEECCCCEEECSSCBCCCCCCCCCEECCCSS
T ss_pred eEEEeCCCCCCCEEEEEEEEEECCccCCCcCCccceEcCCCC
Confidence 367889999999999999765433 34443 457777654
No 87
>1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.65 E-value=0.26 Score=40.85 Aligned_cols=89 Identities=12% Similarity=-0.003 Sum_probs=52.6
Q ss_pred CCCCeEEEEec-CCCCceEEEEEcCcc--cccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccc
Q 008663 84 FEPEQISVSLS-SAHDSVWISWITGEF--QIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYT 160 (558)
Q Consensus 84 ~~P~qi~lt~~-~~p~s~~V~W~T~~~--~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~ 160 (558)
..|..+.+... ++++++.|+|..... .... ....=.|+|....+.....+.. .
T Consensus 9 ~pP~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~-------~~l~Y~v~y~~~~~~~w~~~~~-----------------~ 64 (109)
T 1uc6_A 9 DPPENVVARPVPSNPRRLEVTWQTPSTWPDPES-------FPLKFFLRYRPLILDQWQHVEL-----------------S 64 (109)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEECCTTCCCTTT-------TTBCEEEEEEESSSCCCCCEEE-----------------S
T ss_pred CCCcceEEEEcCCCCCEEEEEECCCCCccCCCc-------EEEEEEEEEEECCCCCcEEEec-----------------c
Confidence 45888887764 457899999986432 0000 0123467887765432221110 0
Q ss_pred cCcEEEEEeCCCCCCCEEEEEEecCCC--C---CccceeEEEc
Q 008663 161 SGIIHHVRLTGLKPDTLYHYQCGDPSI--P---AMSGTYCFRT 198 (558)
Q Consensus 161 ~~~~h~v~l~gL~P~T~Y~Yrvg~~~~--~---~~S~~~~F~T 198 (558)
....+.|.+|+|||.|..||..... + .||+...++|
T Consensus 65 --~~~~~~l~~L~p~t~Y~~~VRa~~~g~g~wS~WS~~~~~~~ 105 (109)
T 1uc6_A 65 --NGTAHTITDAYAGKEYIIQVAAKDNEIGTWSDWSVAAHATP 105 (109)
T ss_dssp --SCSEEEETTCCSSSCEEEEEECCBSSSCCCCCCCEEEEECC
T ss_pred --cCCEEEEeCCCCCCEEEEEEEEEeCCCCCcCcCCCCeeeee
Confidence 0125678999999999999975531 2 4555555554
No 88
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=94.58 E-value=0.27 Score=44.26 Aligned_cols=76 Identities=12% Similarity=0.149 Sum_probs=44.2
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccCcE
Q 008663 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (558)
Q Consensus 85 ~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~~ 164 (558)
.|..+.+.-. ..+++.|+|.......|.. ...=.|+|............-.. ..
T Consensus 8 ~P~~l~~~~~-~~~sv~l~W~~p~~~~~~~-------i~~Y~v~~~~~~~~~~~~~~~~~------------------~~ 61 (197)
T 3lpw_A 8 PPQDLKVKEV-TKTSVTLTWDPPLLDGGSK-------IKNYIVEKRESTRKAYSTVATNC------------------HK 61 (197)
T ss_dssp CCEEEEEEEE-CSSCEEEEEECCSCCTTSC-------CCEEEEEEEETTCSSCEEEEEEE------------------CS
T ss_pred CCCCcEEEEe-cCCEEEEEEcCCccCCCCc-------ccEEEEEEEECCCCccEEeecCC------------------Cc
Confidence 5777766533 3689999998743211110 01235667665543333221110 12
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPS 186 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~ 186 (558)
..+.+++|+|+|.|.|||...+
T Consensus 62 ~~~~~~~L~p~t~Y~~~V~a~~ 83 (197)
T 3lpw_A 62 TSWKVDQLQEGCSYYFRVLAEN 83 (197)
T ss_dssp SEEEECCCCTTCEEEEEEEEEE
T ss_pred cEEEEcCCCCCCEEEEEEEEEc
Confidence 3567899999999999996544
No 89
>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.58 E-value=0.2 Score=41.84 Aligned_cols=37 Identities=16% Similarity=0.174 Sum_probs=28.5
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCC
Q 008663 166 HVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDS 202 (558)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~ 202 (558)
.+.|++|+|+|+|.|||...+. ..+|+...|+|.+..
T Consensus 74 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 113 (118)
T 1x3d_A 74 QFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTSGCS 113 (118)
T ss_dssp EEEEESCCTTCEEEEECCEEESSCBCCCCCCEEEECSCCC
T ss_pred EEEeCCCCCCCEEEEEEEEEECCCCCCCccCEEEEcCCCC
Confidence 4578999999999999965332 357788889987654
No 90
>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.55 E-value=0.16 Score=42.91 Aligned_cols=89 Identities=21% Similarity=0.242 Sum_probs=51.9
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCC---------CceEEEeEEEEeeeecccC
Q 008663 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQ---------LNRKATGRSLVYSQLYPFL 154 (558)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~---------~~~~~~g~~~~y~~~~~~~ 154 (558)
..|.+++++-- +.+++.|+|.-....+ ..=.|+|....+. ..... . .
T Consensus 10 p~p~~L~v~~~-T~~Si~LsW~~p~g~v-----------~~Y~i~y~~~~~~~~e~~~~~~~~~~~-----~----v--- 65 (112)
T 2cui_A 10 PRLSQLSVTDV-TTSSLRLNWEAPPGAF-----------DSFLLRFGVPSPSTLEPHPRPLLQREL-----M----V--- 65 (112)
T ss_dssp CCCCCCEEESC-CSSCEEEECCCCTTSC-----------SEEEEEEECCCCSSSCCCSSCCCCEEE-----E----E---
T ss_pred CCCCceEEEee-cCCeEEEEECCCCCCc-----------cEEEEEEEeCCCCccccccccCcceEE-----E----c---
Confidence 35777777643 3789999997532110 1235788765432 01110 0 0
Q ss_pred CccccccCcEEEEEeCCCCCCCEEEEEEecCCCCCcc--ceeEEEcCCCC
Q 008663 155 GLQNYTSGIIHHVRLTGLKPDTLYHYQCGDPSIPAMS--GTYCFRTMPDS 202 (558)
Q Consensus 155 g~~~~~~~~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S--~~~~F~T~P~~ 202 (558)
++-.-.++|+||+|+|+|..+|........| -....+|.+.+
T Consensus 66 ------~~~~t~~~l~gL~PgT~Y~~~V~A~~~~~~s~p~~~~~~T~~~~ 109 (112)
T 2cui_A 66 ------PGTRHSAVLRDLRSGTLYSLTLYGLRGPHKADSIQGTARTLSGP 109 (112)
T ss_dssp ------ETTCCEEEECSCCTTCEEEEEEEEECSSSEEEEEEEEEECCCCS
T ss_pred ------CCCcCEEEeCCCCCCCEEEEEEEEEECCcccCCEEEEEEECCCC
Confidence 1112367899999999999999765433443 34566776643
No 91
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=94.54 E-value=0.4 Score=44.14 Aligned_cols=37 Identities=30% Similarity=0.215 Sum_probs=28.4
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCC
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPD 201 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~ 201 (558)
..+.|++|+|+|.|.+||...+. ..+|....++|.+.
T Consensus 64 ~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~S~~~~~~t~~~ 103 (211)
T 3p4l_A 64 LSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 103 (211)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred eEEEecCcCCCCEEEEEEEEEcCCCCCccceeEeeecccC
Confidence 35679999999999999965432 25677888998654
No 92
>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1
Probab=94.53 E-value=0.043 Score=45.69 Aligned_cols=38 Identities=37% Similarity=0.401 Sum_probs=31.5
Q ss_pred EEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCCCC
Q 008663 167 VRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDSSS 204 (558)
Q Consensus 167 v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~~~ 204 (558)
+.|+||+|+|+|.+||...+. +.+|+...|+|.+..++
T Consensus 64 ~~i~~L~p~t~Y~f~V~A~~~~G~g~~S~~~~~~T~~~~gp 104 (107)
T 1x5a_A 64 VLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSPPSGP 104 (107)
T ss_dssp EEEESCCSSCEEEEEEEEECSSSCCCCCCCEEEECCCCSCC
T ss_pred EEECCCCCCCEEEEEEEEECCCccCCCCCCEEEEECCCCCC
Confidence 789999999999999965432 36888999999987664
No 93
>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A
Probab=94.43 E-value=0.32 Score=39.92 Aligned_cols=89 Identities=18% Similarity=0.183 Sum_probs=48.9
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCC-CceEEEeEEEEeeeecccCCccccccCc
Q 008663 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQ-LNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (558)
Q Consensus 85 ~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~-~~~~~~g~~~~y~~~~~~~g~~~~~~~~ 163 (558)
.|.++.+.- -+.+++.|+|.-.. |. ...=.|+|...... ...... . .+-
T Consensus 5 ~P~~l~v~~-~t~~sv~lsW~~p~---~~--------i~~Y~v~y~~~~~~~~~~~~~----v--------------~~~ 54 (104)
T 2rb8_A 5 APSQIEVKD-VTDTTALITWMPPS---QP--------VDGFELTYGIKDVPGDRTTID----L--------------TED 54 (104)
T ss_dssp CCEEEEEES-CCSSCEEEEEECCS---SC--------CSEEEEEEEETTCTTCCEEEE----E--------------ETT
T ss_pred CCCccEEEE-ecCCeEEEEEcCCC---Cc--------cceEEEEEEECcCCCceEEEE----c--------------CCC
Confidence 477777653 34689999997532 10 01224677553311 111110 0 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCC--ccceeEEEcCCCCC
Q 008663 164 IHHVRLTGLKPDTLYHYQCGDPSIPA--MSGTYCFRTMPDSS 203 (558)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~--~S~~~~F~T~P~~~ 203 (558)
...+.|+||+|+|+|.++|...+..+ ......|+|.+...
T Consensus 55 ~~~~~l~~L~p~t~Y~~~V~A~~~~g~s~p~~~~~~T~~~~~ 96 (104)
T 2rb8_A 55 ENQYSIGNLKPDTEYEVSLISRRGDMSSNPAKETFTTGLAAA 96 (104)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCC---
T ss_pred cCEEEeCCCCCCCEEEEEEEEEeCCccCCCEEEEEECCCCcc
Confidence 23568999999999999996543222 22346688876643
No 94
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3
Probab=94.43 E-value=0.025 Score=57.46 Aligned_cols=38 Identities=18% Similarity=0.141 Sum_probs=24.2
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCCccc
Q 008663 209 SRIAIVGDVGLTYNT-TSTVSHMISNRPDLILLVGDVTY 246 (558)
Q Consensus 209 ~rfavigD~g~~~~~-~~~l~~l~~~~pDfvl~~GDl~Y 246 (558)
.+++++||+|..... .+.++.+.....+-+|++||++.
T Consensus 57 ~~i~viGDIHG~~~~L~~ll~~~g~~~~~~~vflGD~VD 95 (330)
T 1fjm_A 57 APLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVD 95 (330)
T ss_dssp SSEEEECBCTTCHHHHHHHHHHHCSTTSSCEEECSCCSS
T ss_pred CceEEecCCCCCHHHHHHHHHHhCCCCcceEEeCCCcCC
Confidence 368999999965321 12222222234577999999995
No 95
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=94.42 E-value=0.023 Score=58.18 Aligned_cols=24 Identities=17% Similarity=0.436 Sum_probs=19.6
Q ss_pred HHHHHHHHHcCCcEEEECcccCce
Q 008663 400 VAMEDLLYKYGVDVVFNGHVHAYE 423 (558)
Q Consensus 400 ~~l~~ll~~~~VdlvlsGH~H~ye 423 (558)
+.+..++..++.++++.||+|..+
T Consensus 268 ~~~~~fl~~~~~~~IV~GHt~~~~ 291 (342)
T 2z72_A 268 AELDTILQHFNVNHIVVGHTSQER 291 (342)
T ss_dssp HHHHHHHHHHTCSEEEECSSCCSS
T ss_pred HHHHHHHHHCCCcEEEECCCcccc
Confidence 455677888899999999999754
No 96
>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens}
Probab=94.31 E-value=0.24 Score=41.67 Aligned_cols=81 Identities=10% Similarity=0.079 Sum_probs=45.5
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccCcE
Q 008663 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (558)
Q Consensus 85 ~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~~ 164 (558)
.|..+.+.-- ..+++.|+|.-....-|..+ ..=.|+|.......+..+... ...
T Consensus 20 ~P~~l~~~~~-~~~sv~l~W~~p~~~gg~~i-------~~Y~v~~~~~~~~~w~~~~~~------------------~~~ 73 (120)
T 2yux_A 20 PPQIVKIEDV-WGENVALTWTPPKDDGNAAI-------TGYTIQKADKKSMEWFTVIEH------------------YHR 73 (120)
T ss_dssp CCSCEEEEEE-ETTEEEEEECCCSCCCSSCC-------CCCCEEEEETTTCCCEEEESS------------------CCS
T ss_pred cCCCCEEEEe-cCCEEEEEEcCCCcCCCCCc-------eEEEEEEEECCCCceEEeeec------------------CCc
Confidence 5777766432 35799999976432111111 122477766544333322100 011
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCcc
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPSIPAMS 191 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S 191 (558)
..+.|++|+|+|.|.|||...+..+.+
T Consensus 74 ~~~~v~~L~p~t~Y~frV~A~n~~G~s 100 (120)
T 2yux_A 74 TSATITELVIGNEYYFRVFSENMCGLS 100 (120)
T ss_dssp SCCEECCCCSSEEEEEEECCCSSSCSC
T ss_pred CEEEECCCCCCCEEEEEEEEeeCCcCC
Confidence 234789999999999999876644444
No 97
>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=94.31 E-value=0.15 Score=42.98 Aligned_cols=77 Identities=22% Similarity=0.299 Sum_probs=42.4
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccC-CCCceEEEeEEEEeeeecccCCccccccCc
Q 008663 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRR-SQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (558)
Q Consensus 85 ~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~-~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~ 163 (558)
.|..+.+.-- ..+++.|+|.- +..|.. + ...=.|+|.... +..+..+... . .+-
T Consensus 20 ~P~~~~~~~~-~~~sv~l~W~p--~~~~~~--~----i~~Y~v~~~~~~~~~~w~~~~~~-------~---------~~~ 74 (121)
T 1x4z_A 20 APDRPTISTA-SETSVYVTWIP--RGNGGF--P----IQSFRVEYKKLKKVGDWILATSA-------I---------PPS 74 (121)
T ss_dssp CCCCCEEEEC-CSSEEEEECCC--CCCTTS--C----CCEEEEEEEESSSCCCCEEEEEE-------E---------CTT
T ss_pred cCCCCEEEEc-cCCEEEEEEEC--CCCCCC--c----ceEEEEEEEECCCCCceEEeecc-------c---------CCC
Confidence 4666655433 36899999983 211110 0 012357776654 2222222110 0 112
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC
Q 008663 164 IHHVRLTGLKPDTLYHYQCGDPS 186 (558)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~ 186 (558)
...++|++|+|+|+|.|||...+
T Consensus 75 ~~~~~v~~L~p~t~Y~frV~A~n 97 (121)
T 1x4z_A 75 RLSVEITGLEKGISYKFRVRALN 97 (121)
T ss_dssp CCEEEEESCCTTCEEEEEEEEEE
T ss_pred cCEEEECCCCCCCEEEEEEEEEc
Confidence 34567899999999999997544
No 98
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=94.21 E-value=0.68 Score=42.55 Aligned_cols=103 Identities=12% Similarity=0.095 Sum_probs=56.3
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccCcE
Q 008663 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (558)
Q Consensus 85 ~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~~ 164 (558)
.|.++.+.-- ..+++.|+|.-... .. ...=.|+|....+....... .. ..-.
T Consensus 25 ~P~~l~~~~~-~~~sv~lsW~~p~~---~~-------i~~Y~v~~~~~~~~~~~~~~----~~-------------~~~~ 76 (203)
T 2gee_A 25 QPTDLSFVDI-TDSSIGLRWTPLNS---ST-------IIGYRITVVAAGEGIPIFED----FV-------------DSSV 76 (203)
T ss_dssp CCEEEEEECC-TTTCEEEEEECCSS---SS-------CCEEEEEEEESSSSSCCEEE----EE-------------ETTC
T ss_pred CCCccEEEec-CCCEEEEEecCCCC---CC-------ccEEEEEEEECCCCCCceeE----Ec-------------CCCc
Confidence 4666655433 36899999986431 10 11234666654433221110 00 0112
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCccceeEEEcCCCCCCCCCCeEEEEEec
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPSIPAMSGTYCFRTMPDSSSTSYPSRIAIVGD 216 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~P~~~~~~~~~rfavigD 216 (558)
..+.|++|+|+|.|.++|......+.|....+.|...... ...+++..+++
T Consensus 77 ~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~t~~~~p~-P~~l~~~~~~~ 127 (203)
T 2gee_A 77 GYYTVTGLEPGIDYDISVYTVKNGGESTPTTLTQQTAVPP-PTDLRFTNIGP 127 (203)
T ss_dssp CEEEECSCCTTCEEEEEEEEESSSCBCCCEEEEEECCCCC-CEEEEEEEEET
T ss_pred cEEEeCCCCCCCEEEEEEEEEeCCCccccEeeeecCCCcC-CCceEEEEcCC
Confidence 3567899999999999997655456666666665443322 12345444444
No 99
>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C
Probab=94.03 E-value=0.37 Score=39.44 Aligned_cols=89 Identities=15% Similarity=0.080 Sum_probs=49.4
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCcc--cccCCCCCCCCCCCccEEEEeccCCCC--ceEEEeEEEEeeeecccCCcccc
Q 008663 84 FEPEQISVSLSSAHDSVWISWITGEF--QIGNNLKPLDPKSVVSVVRYGTRRSQL--NRKATGRSLVYSQLYPFLGLQNY 159 (558)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~V~W~T~~~--~~g~~~~~~~p~~~~~~V~yg~~~~~~--~~~~~g~~~~y~~~~~~~g~~~~ 159 (558)
-.|..+.+.-- +.+++.|+|.-... ..|. -..=.|.|....... ... ..+. .
T Consensus 6 ~~P~~~~~~~~-s~tsi~v~W~~p~~~~~ng~--------i~gY~v~y~~~~~~~~~~~~----~~~v------~----- 61 (102)
T 3n1f_C 6 TGPHIAYTEAV-SDTQIMLKWTYIPSSNNNTP--------IQGFYIYYRPTDSDNDSDYK----RDVV------E----- 61 (102)
T ss_dssp SCCEEEEEEEC-SSSCEEEEEECCC-----CC--------CCEEEEEEEETTCCCGGGCE----EEEE------E-----
T ss_pred CCCceeEEEEc-CCCEEEEEeECCChhhcCCc--------cceEEEEEEECCCCCCCceE----EEEE------c-----
Confidence 35777766433 46899999986432 1111 012247777654321 110 0000 0
Q ss_pred ccCcEEEEEeCCCCCCCEEEEEEecCC---CCCccceeEEEc
Q 008663 160 TSGIIHHVRLTGLKPDTLYHYQCGDPS---IPAMSGTYCFRT 198 (558)
Q Consensus 160 ~~~~~h~v~l~gL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T 198 (558)
+-..++.|++|+|+|.|.++|..-+ .+..|+...++|
T Consensus 62 --~~~~~~~l~~L~p~t~Y~v~V~A~n~~G~G~~S~~~~~~T 101 (102)
T 3n1f_C 62 --GSKQWHMIGHLQPETSYDIKMQCFNEGGESEFSNVMICET 101 (102)
T ss_dssp --TTCSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEEC
T ss_pred --CCceEEECCCCCCCCEEEEEEEEECCCcCCCCCCCEEeec
Confidence 0112468999999999999996432 235667777776
No 100
>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens}
Probab=94.01 E-value=0.18 Score=42.70 Aligned_cols=37 Identities=30% Similarity=0.400 Sum_probs=29.0
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCC
Q 008663 166 HVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDS 202 (558)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~ 202 (558)
.++|++|+|+|+|.+||...+. +.+|+...|+|.|..
T Consensus 68 ~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~t~~~~ 107 (122)
T 2e3v_A 68 IVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVR 107 (122)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCCC
T ss_pred eEEeCCCCCCCEEEEEEEEEeCCccCCCcccccccccCCC
Confidence 5688999999999999965432 357788888887754
No 101
>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic}
Probab=94.00 E-value=0.2 Score=40.79 Aligned_cols=78 Identities=23% Similarity=0.253 Sum_probs=44.5
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCC-ceEEEeEEEEeeeecccCCccccccCc
Q 008663 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQL-NRKATGRSLVYSQLYPFLGLQNYTSGI 163 (558)
Q Consensus 85 ~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~-~~~~~g~~~~y~~~~~~~g~~~~~~~~ 163 (558)
.|..+.++ .-+.+++.|+|...... ...=.|+|....... .... .. .+-
T Consensus 4 ~P~~l~v~-~~t~~Sv~lsW~~p~~~-----------i~~Y~v~y~~~~~~~~~~~~-----~~-------------~~~ 53 (98)
T 3tes_A 4 APKNLVVS-EVTEDSLRLSWTAPDAA-----------FDSFMIQYQESEKVGEAINL-----TV-------------PGS 53 (98)
T ss_dssp CCEEEEEE-SCCSSCEEEEEECCTTS-----------CSEEEEEEEETTBCSCCEEE-----EE-------------ETT
T ss_pred CCCceEEE-ecCCCeEEEEecCCcCc-----------cceEEEEEEECCCCCceEEE-----Ec-------------CCC
Confidence 46676665 23478999999864311 012347776654211 1110 00 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCccc
Q 008663 164 IHHVRLTGLKPDTLYHYQCGDPSIPAMSG 192 (558)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~ 192 (558)
.-.+.|+||+|+|.|.++|......+.|+
T Consensus 54 ~t~~~l~gL~P~t~Y~~~V~A~~~~g~S~ 82 (98)
T 3tes_A 54 ERSYDLTGLKPGTEYTVSIYGVKGGHRSN 82 (98)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEETTEEBC
T ss_pred cCEEEECCCCCCCEEEEEEEEEeCCcccC
Confidence 23578999999999999997654334443
No 102
>2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens}
Probab=94.00 E-value=0.45 Score=39.46 Aligned_cols=39 Identities=23% Similarity=0.299 Sum_probs=28.5
Q ss_pred EEEEeCCCCCCCEEEEEEecCC--CCCccceeEEEcCCCCC
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPS--IPAMSGTYCFRTMPDSS 203 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~--~~~~S~~~~F~T~P~~~ 203 (558)
-.++|+||+|||.|.++|.... ....+....++|.|.+.
T Consensus 59 t~~~i~gL~PgT~Y~~~V~A~~~~~~~~p~~~~~~T~p~p~ 99 (104)
T 2dle_A 59 PRAVIPGLRSSTFYNITVCPVLGDIEGTPGFLQVHTPPVPS 99 (104)
T ss_dssp SEEECCSCCSSCEEEEEEEEESSSCCCBCEEEEEECCCCSC
T ss_pred CEEEECCCCCCCEEEEEEEEEECCcccCCeeEEEEccCCCC
Confidence 3678999999999999986533 22444567788887653
No 103
>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=93.94 E-value=0.16 Score=42.74 Aligned_cols=38 Identities=26% Similarity=0.214 Sum_probs=29.3
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCC
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDS 202 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~ 202 (558)
..+.|+||+|+|.|.+||...+. +.+|+...|+|.+..
T Consensus 80 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 120 (125)
T 1uen_A 80 THGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGS 120 (125)
T ss_dssp SEEEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCCC
T ss_pred cEEEeCCCCCCCEEEEEEEEecCCCCCCCCCCEEEECCCCC
Confidence 46789999999999999965432 256788899997654
No 104
>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=93.87 E-value=0.57 Score=38.02 Aligned_cols=87 Identities=17% Similarity=0.213 Sum_probs=48.8
Q ss_pred CCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccCcEE
Q 008663 86 PEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGIIH 165 (558)
Q Consensus 86 P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~~h 165 (558)
|. +.+... ..+++.|+|.-.....|. ...=.|+|........... .. .....
T Consensus 11 p~-~~v~~~-~~~sv~l~W~~p~~~~g~--------i~~Y~v~~~~~~~~~~~~~-----~~-------------~~~~~ 62 (107)
T 2dn7_A 11 PT-MMISTT-AMNTALLQWHPPKELPGE--------LLGYRLQYCRADEARPNTI-----DF-------------GKDDQ 62 (107)
T ss_dssp CE-EEEEEC-STTEEEEEEECCSSCSSC--------CCEEEEEEEETTCSSCEEE-----EE-------------ETTCC
T ss_pred Cc-EeEEec-CCCEEEEEECCCCCCCCc--------eeEEEEEEEECCCCCCEEE-----Ee-------------CCCcc
Confidence 44 555544 578999999864321110 1123467765543322221 00 01123
Q ss_pred EEEeCCCCCCCEEEEEEecCCCC---CccceeEEEcCCC
Q 008663 166 HVRLTGLKPDTLYHYQCGDPSIP---AMSGTYCFRTMPD 201 (558)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~P~ 201 (558)
+++|++|+|+|.|.+||...+.. .+|. ..|+|...
T Consensus 63 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~-~~~~T~~~ 100 (107)
T 2dn7_A 63 HFTVTGLHKGTTYIFRLAAKNRAGLGEEFE-KEIRTPED 100 (107)
T ss_dssp EEEEECCCTTCEEEEEEEEEETTEEEEEEE-EEEECCCC
T ss_pred EEEeCCCCCCCEEEEEEEEEcCCcccCCee-eEEeCCCC
Confidence 56789999999999999765433 2344 45777543
No 105
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=93.83 E-value=0.24 Score=44.69 Aligned_cols=88 Identities=19% Similarity=0.104 Sum_probs=48.5
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccCc
Q 008663 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (558)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~ 163 (558)
..|..+.+.- -+.+++.|+|.-.. |. ...=.|+|....+...... .. .+.
T Consensus 96 ~~P~~l~~~~-~~~~sv~l~W~~p~---~~--------i~~Y~v~~~~~~~~~~~~~-----~~-------------~~~ 145 (186)
T 1qr4_A 96 GSPKGISFSD-ITENSATVSWTPPR---SR--------VDSYRVSYVPITGGTPNVV-----TV-------------DGS 145 (186)
T ss_dssp CCCSCEEEES-CCSSCEEEEECCCS---SC--------CSEEEEEEEETTCCCCEEE-----EE-------------ETT
T ss_pred CCCCccEEEE-eCCCEEEEEEECCC---Cc--------ccEEEEEEEeCCCCCceEE-----Ec-------------CCC
Confidence 4577776642 34689999997432 11 1123466665443211111 00 012
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCcc--ceeEEEcCCC
Q 008663 164 IHHVRLTGLKPDTLYHYQCGDPSIPAMS--GTYCFRTMPD 201 (558)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S--~~~~F~T~P~ 201 (558)
...+.|+||+|+|.|.++|...+..+.| ....|+|.|.
T Consensus 146 ~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~~~~~~T~pd 185 (186)
T 1qr4_A 146 KTRTKLVKLVPGVDYNVNIISVKGFEESEPISGILKTALD 185 (186)
T ss_dssp CCEEEECSCCSSCEEEEEEEEEETTEECCCEEEEEEC---
T ss_pred cCEEEEcCCCCCCEEEEEEEEEcCCCcCcCEEEEEEecCC
Confidence 2456899999999999999764433333 3557777764
No 106
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=93.80 E-value=0.48 Score=44.55 Aligned_cols=88 Identities=16% Similarity=0.195 Sum_probs=52.6
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccCc
Q 008663 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (558)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~ 163 (558)
..|..+.+.-. ..+++.|+|.-.. |. ...=.|+|....+.......- ...
T Consensus 7 ~~P~~l~~~~~-~~~si~l~W~~p~---g~--------i~~Y~v~~~~~~~~~~~~~~~------------------~~~ 56 (234)
T 3f7q_A 7 GAPQNPNAKAA-GSRKIHFNWLPPS---GK--------PMGYRVKYWIQGDSESEAHLL------------------DSK 56 (234)
T ss_dssp CCCEEEEEEEC-SSSCEEEEEECCS---SC--------CCEEEEEEEETTSCGGGCEEE------------------EES
T ss_pred CCCcceEEEEc-CCCEEEEEEECCC---Cc--------cceEEEEEEECCCCccceEEE------------------cCC
Confidence 45788877543 3689999998642 10 112346676544322111000 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCC
Q 008663 164 IHHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPD 201 (558)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~ 201 (558)
...+.|++|+|+|.|.++|...+. ..+|....++|...
T Consensus 57 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~~T~~~ 97 (234)
T 3f7q_A 57 VPSVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQE 97 (234)
T ss_dssp SSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred ccEEEECCCCCCCEEEEEEEEEeCCCcCCCCCeEEEEcCCC
Confidence 235678999999999999965432 24677788988754
No 107
>3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B*
Probab=93.80 E-value=0.33 Score=46.31 Aligned_cols=98 Identities=18% Similarity=0.210 Sum_probs=59.8
Q ss_pred CCCCCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCC-CCceEEEeEEEEeeeecccCCcccc
Q 008663 81 VEGFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRS-QLNRKATGRSLVYSQLYPFLGLQNY 159 (558)
Q Consensus 81 ~~~~~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~-~~~~~~~g~~~~y~~~~~~~g~~~~ 159 (558)
+....|..+.+....++.++.|+|.......+. . ....-.|+|....+ ..+..+..
T Consensus 111 VKPdPP~nLtv~~~~~~~~l~LsW~~P~~~~~~-~-----~~L~YEVrYr~~~~~~~W~~v~~----------------- 167 (223)
T 3up1_A 111 VKPEAPFDLSVVYREGANDFVVTFNTSHLQKKY-V-----KVLMHDVAYRQEKDENKWTHVNL----------------- 167 (223)
T ss_dssp BCCCCCEEEEEEEETTTTEEEEEEECGGGGCSS-S-----CCEEEEEEEEESSCSSCCEEEEE-----------------
T ss_pred EEcCCCcceEEEEEcCCCCEEEEECCCCCCCCc-c-----eeEEEEEEEEeCCCCCceEEEEe-----------------
Confidence 344568889888877677899999985421110 0 01234577776532 22222110
Q ss_pred ccCcEEEEEeCCCCCCCEEEEEEecCC-------CCCccceeEEEcCCCC
Q 008663 160 TSGIIHHVRLTGLKPDTLYHYQCGDPS-------IPAMSGTYCFRTMPDS 202 (558)
Q Consensus 160 ~~~~~h~v~l~gL~P~T~Y~Yrvg~~~-------~~~~S~~~~F~T~P~~ 202 (558)
......+.+.+|+|+|+|..||.... -..||+...|+|++.+
T Consensus 168 -~~t~~~i~l~~L~Pgt~Y~vqVR~r~~~~~~G~WSeWS~~~~~~T~~~~ 216 (223)
T 3up1_A 168 -SSTKLTLLQRKLQPAAMYEIKVRSIPDHYFKGFWSEWSPSYYFRTPEIN 216 (223)
T ss_dssp -SSSEEEEEGGGSCTTCEEEEEEEEEECSSCCBCCCCCCCCEEEECCCCC
T ss_pred -cCceeEEeccccCCCcEEEEEEEEeeCCCCCCCCCCCCCCeEEECCCCC
Confidence 01123456789999999999995322 1267788999997653
No 108
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*
Probab=93.73 E-value=0.043 Score=54.91 Aligned_cols=23 Identities=17% Similarity=0.271 Sum_probs=19.3
Q ss_pred HHHHHHHHHHcCCcEEEECcccC
Q 008663 399 RVAMEDLLYKYGVDVVFNGHVHA 421 (558)
Q Consensus 399 r~~l~~ll~~~~VdlvlsGH~H~ 421 (558)
.+...+.++++++++++=||.=.
T Consensus 228 ~~~~~~fl~~n~l~~IiR~Hq~v 250 (299)
T 3e7a_A 228 AEVVAKFLHKHDLDLICRAHQVV 250 (299)
T ss_dssp HHHHHHHHHHHTCSEEEECCSCC
T ss_pred HHHHHHHHHHCCCeEEEEcCeee
Confidence 36778899999999999999843
No 109
>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1
Probab=93.68 E-value=0.17 Score=41.80 Aligned_cols=77 Identities=10% Similarity=0.058 Sum_probs=42.0
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccCcE
Q 008663 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (558)
Q Consensus 85 ~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~~ 164 (558)
.|..+.+.-- ..+++.|+|.-....-|..+ ..=.|+|.......+..+. ....-.
T Consensus 11 ~P~~l~~~~~-~~~sv~l~W~~p~~~~~~~i-------~~Y~v~~~~~~~~~w~~~~-----------------~~~~~~ 65 (111)
T 1x5y_A 11 APQHLTVEDV-TDTTTTLKWRPPDRIGAGGI-------DGYLVEYCLEGSEEWVPAN-----------------KEPVER 65 (111)
T ss_dssp CCEEEEEEEE-CSSEEEEEEECCSCCCSSCC-------CEEEEEEEETTCCCCEESS-----------------SSCBSS
T ss_pred CCCCCEEEec-cCCEEEEEECCCCcCCCCcc-------cEEEEEEEECCCCceEEcc-----------------ccCCcc
Confidence 5777766543 36899999986432111000 1224566544332221100 000112
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPS 186 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~ 186 (558)
..++|++|+|+|+|.|||...+
T Consensus 66 ~~~~v~~L~p~t~Y~frV~A~n 87 (111)
T 1x5y_A 66 CGFTVKDLPTGARILFRVVGVN 87 (111)
T ss_dssp SEEEEECCCTTCCEEEEEEEEE
T ss_pred cEEEECCCCCCCEEEEEEEEEc
Confidence 3567899999999999997654
No 110
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=93.67 E-value=0.079 Score=56.45 Aligned_cols=25 Identities=16% Similarity=0.179 Sum_probs=20.6
Q ss_pred HHHHHHHHHcCCcEEEECcccCcee
Q 008663 400 VAMEDLLYKYGVDVVFNGHVHAYER 424 (558)
Q Consensus 400 ~~l~~ll~~~~VdlvlsGH~H~yeR 424 (558)
+.....++++++++++.||.+..+-
T Consensus 387 ~~~~~fl~~~~~~~iir~H~~~~~g 411 (477)
T 1wao_1 387 DVTKAFLEENNLDYIIRSHEVKAEG 411 (477)
T ss_dssp HHHHHHHHHTTCCEEEECCSCCTEE
T ss_pred HHHHHHHHHcCCeEEEECCCCCcCC
Confidence 4567788999999999999987543
No 111
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.65 E-value=0.18 Score=41.62 Aligned_cols=22 Identities=18% Similarity=0.246 Sum_probs=18.4
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPS 186 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~ 186 (558)
...+|++|+|+|+|.|||...+
T Consensus 65 ~~~~v~~L~p~t~Y~frV~A~n 86 (110)
T 2yuw_A 65 TKFTITGLPTDAKIFVRVKAVN 86 (110)
T ss_dssp SEEEECSCCTTCEEEEEEEEEE
T ss_pred CEEEECCCCCCCEEEEEEEEEc
Confidence 3567899999999999997654
No 112
>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=93.65 E-value=0.32 Score=40.63 Aligned_cols=37 Identities=19% Similarity=0.108 Sum_probs=26.3
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC--CccceeEEEcCCC
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPSIP--AMSGTYCFRTMPD 201 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~--~~S~~~~F~T~P~ 201 (558)
..+.|+||+|+|.|.++|...... .......|+|.+.
T Consensus 59 t~~~l~~L~P~t~Y~~~V~A~~~~~~s~~~~~~~~T~~~ 97 (115)
T 2cuh_A 59 VDYPLHDLVLHTNYTATVRGLRGPNLTSPASITFTTGLE 97 (115)
T ss_dssp SEEEECSCCSSSEEEEEEEEEETTEECCCEEEEEESCCC
T ss_pred cEEEEeCCCCCCEEEEEEEEEeCCCcCCCEEEEEEeCCC
Confidence 357899999999999999654322 2234567888754
No 113
>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=93.63 E-value=0.48 Score=38.91 Aligned_cols=37 Identities=22% Similarity=0.124 Sum_probs=26.5
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCc--cceeEEEcCCC
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPSIPAM--SGTYCFRTMPD 201 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~~~--S~~~~F~T~P~ 201 (558)
..++|+||+|+|.|.++|...+..+. .....|+|...
T Consensus 59 ts~~l~~L~p~t~Y~~~V~A~~~~g~s~~~~~~~~T~~~ 97 (105)
T 2cum_A 59 TSHQLLGLFPSTSYNARLQAMWGQSLLPPVSTSFTTGGL 97 (105)
T ss_dssp SEEEECSCCTTCEEEEEEEEEBTTBCCCCEEEEEECCCS
T ss_pred cEEEECCCCCCCEEEEEEEEEeCCcccCCEEEEEEeCCc
Confidence 36789999999999999975433332 34567888654
No 114
>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=93.62 E-value=0.2 Score=41.54 Aligned_cols=36 Identities=22% Similarity=0.273 Sum_probs=24.8
Q ss_pred EEEeCCCCCCCEEEEEEecCCCC---CccceeE-EEcCCC
Q 008663 166 HVRLTGLKPDTLYHYQCGDPSIP---AMSGTYC-FRTMPD 201 (558)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~-F~T~P~ 201 (558)
.++|++|+|+|.|.|||...+.. .+|..-. ++|.+.
T Consensus 73 ~~~i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~v~t~~~ 112 (117)
T 1uem_A 73 LYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDS 112 (117)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEEEEECCCCCCEECCCS
T ss_pred EEEECCCCCCCEEEEEEEEECCCccCCCcCCCccEEccCC
Confidence 46789999999999999765432 2344333 666654
No 115
>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=93.61 E-value=0.036 Score=48.88 Aligned_cols=47 Identities=26% Similarity=0.322 Sum_probs=33.7
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCCCCCCCCeEE
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDSSSTSYPSRI 211 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~~~~~~~~rf 211 (558)
-.++|+||+|+|.|..||..... +..|....|+|.+...+...++++
T Consensus 82 ts~~v~~L~P~T~Y~~rV~A~n~~G~G~~S~~~~f~T~~~~P~~P~~p~l 131 (137)
T 1wk0_A 82 TNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCEPDIPNPPRI 131 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCSSSCCCSCSCC
T ss_pred cEEEEcCCCCCCEEEEEEEEEeCCCcCCCCCCEEEECCCCCCCCCCCCEE
Confidence 46789999999999999965432 357888899998765333234443
No 116
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=93.55 E-value=0.045 Score=55.98 Aligned_cols=22 Identities=14% Similarity=0.178 Sum_probs=18.7
Q ss_pred HHHHHHHHHcCCcEEEECcccC
Q 008663 400 VAMEDLLYKYGVDVVFNGHVHA 421 (558)
Q Consensus 400 ~~l~~ll~~~~VdlvlsGH~H~ 421 (558)
+...+.++++++++++=||.=.
T Consensus 250 ~~~~~Fl~~n~l~~IiRaHq~~ 271 (357)
T 3ll8_A 250 PAVCEFLQHNNLLSILRAHEAQ 271 (357)
T ss_dssp HHHHHHHHHTTCSEEEECCSCC
T ss_pred HHHHHHHHHCCCeEEEEecccc
Confidence 5677889999999999999754
No 117
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=93.52 E-value=0.068 Score=53.87 Aligned_cols=23 Identities=13% Similarity=0.176 Sum_probs=19.4
Q ss_pred HHHHHHHHHHcCCcEEEECcccC
Q 008663 399 RVAMEDLLYKYGVDVVFNGHVHA 421 (558)
Q Consensus 399 r~~l~~ll~~~~VdlvlsGH~H~ 421 (558)
.+...+.++++++++++=||.-.
T Consensus 233 ~~~~~~fl~~n~l~~iiR~Hq~~ 255 (315)
T 3h63_A 233 PDVTKAFLEENNLDYIIRSHEVK 255 (315)
T ss_dssp HHHHHHHHHHHTCSEEEECCSCC
T ss_pred HHHHHHHHHHcCCcEEEEeceee
Confidence 35677889999999999999864
No 118
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=93.49 E-value=0.32 Score=40.78 Aligned_cols=24 Identities=17% Similarity=0.393 Sum_probs=19.5
Q ss_pred EEEeCCCCCCCEEEEEEecCCCCC
Q 008663 166 HVRLTGLKPDTLYHYQCGDPSIPA 189 (558)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~~~ 189 (558)
.++++||+|+|+|.|||...+..+
T Consensus 69 ~~~v~~L~p~t~Y~frV~A~N~~G 92 (112)
T 1bpv_A 69 EFTVSGLTEDAAYEFRVIAKNAAG 92 (112)
T ss_dssp EEEECSCCSSCCEEEEEEEECTTS
T ss_pred EEEECCCCCCCEEEEEEEEEECCC
Confidence 457899999999999998765444
No 119
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=93.48 E-value=0.44 Score=44.02 Aligned_cols=94 Identities=14% Similarity=0.161 Sum_probs=55.7
Q ss_pred CCCCCeEEEEecC---CCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCcccc
Q 008663 83 GFEPEQISVSLSS---AHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNY 159 (558)
Q Consensus 83 ~~~P~qi~lt~~~---~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~ 159 (558)
...|..+.+.... .++++.|+|.......... +-....=.|+|....+..+.... .
T Consensus 103 p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~----g~~~~~Y~v~y~~~~~~~~~~~~------~----------- 161 (210)
T 3n06_B 103 PDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKT----GWFTLLYEIRLKPEKAAEWEIHF------A----------- 161 (210)
T ss_dssp CCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTT----SSCCEEEEEEEECTTCSSCEEEE------E-----------
T ss_pred cCCCceEEEEEecCcCCCceEEEEcCCCCCccccC----CeEEEEEEEEEecCCCCCCEEEe------c-----------
Confidence 4568888877643 4689999998643211000 00001234777765443322110 0
Q ss_pred ccCcEEEEEeCCCCCCCEEEEEEecCC---C-CCccceeEEEcC
Q 008663 160 TSGIIHHVRLTGLKPDTLYHYQCGDPS---I-PAMSGTYCFRTM 199 (558)
Q Consensus 160 ~~~~~h~v~l~gL~P~T~Y~Yrvg~~~---~-~~~S~~~~F~T~ 199 (558)
+....+.|.+|+|+|.|..||.... . ..||+...|+|+
T Consensus 162 --~~~~~~~l~~L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~~Tp 203 (210)
T 3n06_B 162 --GQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIP 203 (210)
T ss_dssp --ETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEECC
T ss_pred --cCceEEEEeccCCCCEEEEEEEEecCCCcccCCCCceeEECc
Confidence 0123567899999999999996432 1 368889999995
No 120
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}
Probab=93.43 E-value=0.067 Score=54.37 Aligned_cols=24 Identities=13% Similarity=0.164 Sum_probs=20.0
Q ss_pred HHHHHHHHHHcCCcEEEECcccCc
Q 008663 399 RVAMEDLLYKYGVDVVFNGHVHAY 422 (558)
Q Consensus 399 r~~l~~ll~~~~VdlvlsGH~H~y 422 (558)
.+...+.++++++++++=||.-..
T Consensus 237 ~~~~~~fl~~n~l~~IiR~Hq~~~ 260 (335)
T 3icf_A 237 PDITDRFLRNNKLRKIFRSHELRM 260 (335)
T ss_dssp HHHHHHHHHHTTCSEEEECSSCCT
T ss_pred HHHHHHHHHHCCCeEEEEcCceec
Confidence 356778899999999999998653
No 121
>3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum}
Probab=93.19 E-value=0.65 Score=38.37 Aligned_cols=33 Identities=21% Similarity=0.097 Sum_probs=22.0
Q ss_pred EeCCCCCCCEEEEEEecCCCC---CccceeEEEcCC
Q 008663 168 RLTGLKPDTLYHYQCGDPSIP---AMSGTYCFRTMP 200 (558)
Q Consensus 168 ~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~P 200 (558)
..++|+||++|+|+|..-+.. ..|...+.++..
T Consensus 60 ~d~~l~~g~~Y~Y~V~Avn~~geS~~S~~vs~~~~~ 95 (103)
T 3mpc_A 60 TDTGVATGTKYYYVVSAVSNGVETLNSAEAILQYPK 95 (103)
T ss_dssp EETTCCTTCCCEEEEEEEETTEECCCCCCEECBCCC
T ss_pred EECCCCCCCEEEEEEEEEeCcCCcCCCccEEEECCc
Confidence 358999999999999643322 455555555443
No 122
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=93.05 E-value=0.41 Score=43.06 Aligned_cols=88 Identities=16% Similarity=0.071 Sum_probs=50.7
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccCc
Q 008663 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (558)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~ 163 (558)
..|..+.+.-- ..+++.|+|.-.... ...=.|+|....+. ... ... .+-
T Consensus 8 ~~P~~l~~~~~-~~~sv~l~W~~p~~~-----------i~~Y~v~~~~~~~~-~~~-----~~~-------------~~~ 56 (186)
T 1qr4_A 8 DNPKDLEVSDP-TETTLSLRWRRPVAK-----------FDRYRLTYVSPSGK-KNE-----MEI-------------PVD 56 (186)
T ss_dssp CCCEEEEEESC-CSSEEEEEEECCSSC-----------CSEEEEEEECTTCC-EEE-----EEE-------------CTT
T ss_pred cCCCceEEEec-CCCEEEEEEeCCCCC-----------ccEEEEEEEeCCCC-eeE-----EEC-------------CCC
Confidence 35777776533 368999999864211 01234667643221 110 000 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCccc--eeEEEcCCCC
Q 008663 164 IHHVRLTGLKPDTLYHYQCGDPSIPAMSG--TYCFRTMPDS 202 (558)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~P~~ 202 (558)
...+.|++|+|+|.|.++|...+....|. ...++|.|.+
T Consensus 57 ~~~~~i~~L~p~t~Y~~~V~a~~~~~~s~~~~~~~~t~p~~ 97 (186)
T 1qr4_A 57 STSFILRGLDAGTEYTISLVAEKGRHKSKPTTIKGSTVVGS 97 (186)
T ss_dssp CSEEEEESCCSSCEEEEEEEEESSSCBCCCEEEEEECCCCC
T ss_pred CCEEEECCCCCCCEEEEEEEEEcCCccCCCEEEEEECCCCC
Confidence 23467899999999999997655444443 5667777653
No 123
>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=92.96 E-value=0.31 Score=40.85 Aligned_cols=93 Identities=20% Similarity=0.104 Sum_probs=53.9
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccCc
Q 008663 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (558)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~ 163 (558)
..|..+.+.. ..+++.++|.-... |. .++ ..=.|+|.. .+..+..+... + .+-
T Consensus 9 ~pP~~l~v~~--~~~sv~L~W~pP~~--~~--~~I----~gY~vey~~-~~~~W~~~~~~---~-------------~~~ 61 (108)
T 1v5j_A 9 SPPRGLVAVR--TPRGVLLHWDPPEL--VP--KRL----DGYVLEGRQ-GSQGWEVLDPA---V-------------AGT 61 (108)
T ss_dssp CCCEEEEEEE--CSSSEEEEEECCSC--CS--SCC----CBEEEEEEE-TTCCCEEEEEE---E-------------CSS
T ss_pred CCCcceEEEE--eCCEEEEEECCCCC--CC--CCC----cEEEEEEEe-CCCCcEEeeee---c-------------CCC
Confidence 3577787764 35789999987542 21 011 123578877 33333322211 1 112
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCC---CccceeEEEcCCCCC
Q 008663 164 IHHVRLTGLKPDTLYHYQCGDPSIP---AMSGTYCFRTMPDSS 203 (558)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~P~~~ 203 (558)
..+..+.+|+|+++|.+||...+.. ..|+...++|....+
T Consensus 62 ~t~~~v~~L~pg~~Y~FRV~A~n~~G~s~pS~~~~v~T~~~~~ 104 (108)
T 1v5j_A 62 ETELLVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTSGLSG 104 (108)
T ss_dssp CCEEECCCCCTTSCEECCBEEEETTEEEEECSCCCCCCSSCSS
T ss_pred cCEEEeCCCCCCCEEEEEEEEEcCCCCcCCCCCEEEEeCCccc
Confidence 2356789999999999999654422 455666666655443
No 124
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=92.72 E-value=0.32 Score=44.96 Aligned_cols=96 Identities=17% Similarity=0.110 Sum_probs=54.3
Q ss_pred CCCCCeEEEEec-CCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCcccccc
Q 008663 83 GFEPEQISVSLS-SAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTS 161 (558)
Q Consensus 83 ~~~P~qi~lt~~-~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~ 161 (558)
...|..+.+... ..++++.|+|.......|. ...=.|+|....+..+..+.- . . ..
T Consensus 104 p~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~~--------i~~Y~v~y~~~~~~~~~~~~~----------~----~-~~ 160 (215)
T 1bqu_A 104 PNPPHNLSVINSEELSSILKLTWTNPSIKSVI--------ILKYNIQYRTKDASTWSQIPP----------E----D-TA 160 (215)
T ss_dssp CCCCEEEEEECC--CCSCEEEEEECCGGGGTS--------CEEEEEEEEETTCSSCEECCG----------G----G-GC
T ss_pred CCCCCceEEEEecCCCceEEEEEeCCCCCCcc--------eEEEEEEEccCCCCCceEecc----------c----c-cc
Confidence 346777777643 3568999999864321110 012245665543222211100 0 0 01
Q ss_pred CcEEEEEeCCCCCCCEEEEEEecCC---CC---CccceeEEEcCCC
Q 008663 162 GIIHHVRLTGLKPDTLYHYQCGDPS---IP---AMSGTYCFRTMPD 201 (558)
Q Consensus 162 ~~~h~v~l~gL~P~T~Y~Yrvg~~~---~~---~~S~~~~F~T~P~ 201 (558)
+....++|++|+|+|.|.+||...+ .+ .||+...++|.+.
T Consensus 161 ~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~~ 206 (215)
T 1bqu_A 161 STRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYED 206 (215)
T ss_dssp SCCSEEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECCC
T ss_pred CccceEEeCCCCCCCEEEEEEEEccCCCCCccCCCCCccccccccc
Confidence 1234678999999999999996532 11 3777888888764
No 125
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=92.70 E-value=0.64 Score=42.92 Aligned_cols=93 Identities=14% Similarity=0.125 Sum_probs=55.0
Q ss_pred CCCCCeEEEEecC-----CCCceEEEEEcCcccccCCCCCCCCCCCccEEEEe-ccCCCCceEEEeEEEEeeeecccCCc
Q 008663 83 GFEPEQISVSLSS-----AHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYG-TRRSQLNRKATGRSLVYSQLYPFLGL 156 (558)
Q Consensus 83 ~~~P~qi~lt~~~-----~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg-~~~~~~~~~~~g~~~~y~~~~~~~g~ 156 (558)
...|..+.+.... ..+++.|+|..... .|. + ...=.|+|. ...+..+..+.-.
T Consensus 109 p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~-~~~-~------~l~Y~v~y~~~~~~~~w~~~~~~------------- 167 (215)
T 1cd9_B 109 LEPPMLQALDIGPDVVSHQPGCLWLSWKPWKP-SEY-M------EQECELRYQPQLKGANWTLVFHL------------- 167 (215)
T ss_dssp CCCCEEEECCC-------CCSCEEEEEECCGG-GTT-S------CEEEEEEEEESSTTCCCEEEEEE-------------
T ss_pred eCCCcEEEEEEeccccCCCCCeEEEEEeCCCC-CCe-E------EEEEEEEEccCCCCCCcEEEecc-------------
Confidence 3457777665532 46889999986432 111 0 013357887 4443333322100
Q ss_pred cccccCcEEEEEeCCCCCCCEEEEEEecCC---C---CCccceeEEEcCC
Q 008663 157 QNYTSGIIHHVRLTGLKPDTLYHYQCGDPS---I---PAMSGTYCFRTMP 200 (558)
Q Consensus 157 ~~~~~~~~h~v~l~gL~P~T~Y~Yrvg~~~---~---~~~S~~~~F~T~P 200 (558)
.+....+.|.+|+|+|+|.+||.... . ..||+...|+|+.
T Consensus 168 ----~~~~~~~~l~~L~p~t~Y~~~Vra~~~~g~G~wS~wS~~~~~~T~e 213 (215)
T 1cd9_B 168 ----PSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPTM 213 (215)
T ss_dssp ----ESCEEEEEECCCCSCSCEEEEEEEEESSSCCCCCCCCCCEEECCCC
T ss_pred ----cCcceEEEEcCCCCCCEEEEEEEeeECCCCCCCcCCCCccceecCC
Confidence 01234578999999999999996432 1 2578888999875
No 126
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3
Probab=92.59 E-value=0.087 Score=56.28 Aligned_cols=23 Identities=13% Similarity=0.130 Sum_probs=19.8
Q ss_pred HHHHHHHHHcCCcEEEECcccCc
Q 008663 400 VAMEDLLYKYGVDVVFNGHVHAY 422 (558)
Q Consensus 400 ~~l~~ll~~~~VdlvlsGH~H~y 422 (558)
+...+.++++++++++-||.-..
T Consensus 263 d~v~~FL~~n~l~lIIRaHq~v~ 285 (521)
T 1aui_A 263 PAVCEFLQHNNLLSILRAHEAQD 285 (521)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCT
T ss_pred HHHHHHHHHcCCcEEEEccchhc
Confidence 56788899999999999998753
No 127
>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=92.58 E-value=0.98 Score=35.83 Aligned_cols=36 Identities=19% Similarity=0.095 Sum_probs=25.2
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCccc--eeEEEcC
Q 008663 164 IHHVRLTGLKPDTLYHYQCGDPSIPAMSG--TYCFRTM 199 (558)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~ 199 (558)
...+.|+||+|+|.|.++|..-+..+.|. ...++|.
T Consensus 54 ~~~~~l~~L~p~t~Y~~~V~A~~~~g~s~p~~~~~~T~ 91 (94)
T 1j8k_A 54 EDTAELQGLRPGSEYTVSVVALHDDMESQPLIGTQSTA 91 (94)
T ss_dssp CCEEEECSCCCCSEEEEEEEECSSSCCCCCEEEEEECC
T ss_pred ccEEEeCCCCCCCEEEEEEEEEcCCCcCCCEEeEEEec
Confidence 34678999999999999998655334332 3445554
No 128
>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A
Probab=92.47 E-value=0.53 Score=44.42 Aligned_cols=93 Identities=13% Similarity=0.113 Sum_probs=54.8
Q ss_pred CCCCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCcccccc
Q 008663 82 EGFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTS 161 (558)
Q Consensus 82 ~~~~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~ 161 (558)
....|..|++......+++.|+|...... ++. ....=.|+|....+..+.... .. .
T Consensus 121 ~p~pP~~l~~~~~~~~~~l~v~W~~P~~~------~~~-~~l~Yev~y~~~~~~~w~~~~---~~--------------~ 176 (227)
T 1eer_B 121 LLDAPVGLVARLADESGHVVLRWLPPPET------PMT-SHIRYEVDVSAGQGAGSVQRV---EI--------------L 176 (227)
T ss_dssp ECCCCEEEEEEECSSTTCEEEEEECCSSC------SCG-GGEEEEEEEECCSSSCCCCEE---EE--------------C
T ss_pred ccCcCcceEEEEcCCCCeEEEEEcCCCCc------ccc-cceEEEEEEEcCCCCCcEEEE---EE--------------e
Confidence 34568888887654468899999864321 000 011235677654432221100 00 0
Q ss_pred CcEEEEEeCCCCCCCEEEEEEecCCC--------CCccceeEEEc
Q 008663 162 GIIHHVRLTGLKPDTLYHYQCGDPSI--------PAMSGTYCFRT 198 (558)
Q Consensus 162 ~~~h~v~l~gL~P~T~Y~Yrvg~~~~--------~~~S~~~~F~T 198 (558)
.-...+.|.+|+|+|.|..||..... ..||+...|+|
T Consensus 177 ~~~~~~~l~~L~p~t~Y~vqVRa~~~~~~~~g~wS~WS~~~~~~t 221 (227)
T 1eer_B 177 EGRTECVLSNLRGRTRYTFAVRARMAEPSFGGFWSEWSEPVSLLT 221 (227)
T ss_dssp TTCCEEEECCCCSSCEEEEEEEEEECTTTCCEECCCCCCCEEEEC
T ss_pred cCceEEEEcccCCCCeEEEEEEEeECCCCCCCcCCCCCCCEEEEC
Confidence 01235678999999999999964421 36888889998
No 129
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=92.46 E-value=0.63 Score=42.74 Aligned_cols=35 Identities=20% Similarity=0.231 Sum_probs=27.4
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCC
Q 008663 166 HVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMP 200 (558)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P 200 (558)
...|+||+|+|.|.|||...+. +.+|+...++|..
T Consensus 175 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 212 (214)
T 2ibg_A 175 SFKIAPLETATMYEFKLQSFSAASASEFSALKQGRTQR 212 (214)
T ss_dssp EEEECSCCTTCEEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred EEEeCCCCCCCEEEEEEEEEcCCccCCCcceEeeEecC
Confidence 4578999999999999965432 3577888888864
No 130
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=92.34 E-value=0.52 Score=46.25 Aligned_cols=95 Identities=16% Similarity=0.102 Sum_probs=54.8
Q ss_pred CCCCCeEEEEec-CCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCcccccc
Q 008663 83 GFEPEQISVSLS-SAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTS 161 (558)
Q Consensus 83 ~~~P~qi~lt~~-~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~ 161 (558)
...|..+.+... ..++++.|+|.-.....|. ...=.|+|.......+..+.- . + ..
T Consensus 200 p~pP~~~~v~~~~~~~~sv~l~W~~p~~~~~~--------i~~Y~v~y~~~~~~~w~~~~~----------~----~-~~ 256 (303)
T 1i1r_A 200 PNPPHNLSVINSEELSSILKLTWTNPSIKSVI--------ILKYNIQYRTKDASTWSQIPP----------E----D-TA 256 (303)
T ss_dssp CCCCEEEEEECCSSSSSCEEEEEECCGGGGTS--------CEEEEEEEEETTCSSCEECCG----------G----G-GC
T ss_pred cCCCcceEEEEecCCCCEEEEEECCCCCCCcc--------cEEEEEEEEeCCCCCceEEcc----------c----c-CC
Confidence 345777777543 3578999999864421110 012246666554322221100 0 0 01
Q ss_pred CcEEEEEeCCCCCCCEEEEEEecCC---C---CCccceeEEEcCC
Q 008663 162 GIIHHVRLTGLKPDTLYHYQCGDPS---I---PAMSGTYCFRTMP 200 (558)
Q Consensus 162 ~~~h~v~l~gL~P~T~Y~Yrvg~~~---~---~~~S~~~~F~T~P 200 (558)
.-...+.|++|+|+|.|.+||...+ . ..||+...|+|+.
T Consensus 257 ~~~~~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e 301 (303)
T 1i1r_A 257 STRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 301 (303)
T ss_dssp SCCSEEEECSCCTTCEEEEEEEEEETTSCSCCCCCCCCEEEECCC
T ss_pred CceeEEEeCCCCCCCEEEEEEEeccCCCCCCcCCCCCccceeCCc
Confidence 1234578999999999999996432 1 2567888999864
No 131
>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.34 E-value=0.89 Score=37.58 Aligned_cols=36 Identities=14% Similarity=0.169 Sum_probs=24.4
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC---Cccc-eeEEEcCC
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPSIP---AMSG-TYCFRTMP 200 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~-~~~F~T~P 200 (558)
..+.|++|+|+|.|.+||...+.. .+|. ...++|.+
T Consensus 73 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~t~~ 112 (118)
T 2yrz_A 73 TSVVVEDLLPNHSYVFRVRAQSQEGWGREREGVITIESQV 112 (118)
T ss_dssp CEEEEESCCTTCEEEEEEEEEESSCEEEEEEEEEECCCSC
T ss_pred CEEEeCCCCCCCEEEEEEEEEcCCcCCCCcCCceEeCCCC
Confidence 356789999999999999765433 3444 44444443
No 132
>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A
Probab=92.22 E-value=0.66 Score=37.72 Aligned_cols=74 Identities=19% Similarity=0.222 Sum_probs=42.6
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCC-CceEEEeEEEEeeeecccCCccccccCc
Q 008663 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQ-LNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (558)
Q Consensus 85 ~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~-~~~~~~g~~~~y~~~~~~~g~~~~~~~~ 163 (558)
.|..+++.-- +.+++.|+|.-... .|. ...=.|+|....+. ...... .+ +-
T Consensus 7 ~P~~l~v~~~-t~~Sv~l~W~~p~~-~~~--------i~~Y~v~y~~~~~~~~~~~~~---------v~---------~~ 58 (101)
T 3k2m_C 7 VPTKLEVVAA-TPTSLLISWDAPMS-SSS--------VYYYRITYGETGGNSPVQEFT---------VP---------YS 58 (101)
T ss_dssp SSCEEEEEEE-ETTEEEEEECCCCT-TSC--------CCEEEEEEEETTCSSCCEEEE---------EE---------TT
T ss_pred CCcceEEeec-CCCEEEEEecCCCC-CCc--------eeeEEEEEEECCCCCccEEEE---------cC---------CC
Confidence 5788877543 36899999975321 010 01224677654332 111110 00 11
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC
Q 008663 164 IHHVRLTGLKPDTLYHYQCGDPS 186 (558)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~ 186 (558)
...++|+||+|+|.|.++|..-.
T Consensus 59 ~t~~~l~~L~p~t~Y~~~V~A~~ 81 (101)
T 3k2m_C 59 SSTATISGLSPGVDYTITVYAWG 81 (101)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEE
T ss_pred ccEEEECCCCCCCEEEEEEEEEe
Confidence 23678999999999999997544
No 133
>2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B*
Probab=91.98 E-value=0.67 Score=43.63 Aligned_cols=96 Identities=21% Similarity=0.231 Sum_probs=55.9
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccCc
Q 008663 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (558)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~ 163 (558)
..|..|++...+ .+++.|+|......... + ....=.|+|....+. +..+. ... ....
T Consensus 107 ~pP~~l~~~~~~-~~~l~lsW~~p~~~~~~-----~-~~l~Yevry~~~~~~-w~~~~--~~~-------------~~~~ 163 (214)
T 2b5i_B 107 MAPISLQVVHVE-THRCNISWEISQASHYF-----E-RHLEFEARTLSPGHT-WEEAP--LLT-------------LKQK 163 (214)
T ss_dssp CCCEEEEEEEEC-SSCEEEEEECCSCCGGG-----T-TCEEEEEEEECTTSC-STTSC--CEE-------------ECSC
T ss_pred CCCceEEEEEec-CCeEEEEECCCCccccC-----C-CceEEEEEEecCCCC-hheee--eee-------------eccc
Confidence 568888887655 47899999875321000 0 001235777665321 11100 000 0112
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC-------CCccceeEEEcCCCC
Q 008663 164 IHHVRLTGLKPDTLYHYQCGDPSI-------PAMSGTYCFRTMPDS 202 (558)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~-------~~~S~~~~F~T~P~~ 202 (558)
-+.+.|.+|+|||+|..||..... ..||+...|+|.|..
T Consensus 164 ~~~~~l~~L~p~t~Y~vqVRa~~~~~~~G~WS~WS~~~~~~T~~~~ 209 (214)
T 2b5i_B 164 QEWICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKPAA 209 (214)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEESCCSSCCCCCCCCCEEEECCC--
T ss_pred ceEEEeccCCCCCEEEEEEEEeeCCCCCCCccCCCCCEEEEcCCCC
Confidence 346788999999999999964321 378889999998764
No 134
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=91.90 E-value=0.54 Score=42.20 Aligned_cols=80 Identities=19% Similarity=0.273 Sum_probs=45.3
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccCc
Q 008663 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (558)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~ 163 (558)
..|..+.+.-. +.+++.|+|.......|.. ...=.|+|.............. -
T Consensus 104 ~~p~~~~~~~~-~~~~v~l~W~~p~~~~~~~-------i~~Y~v~~~~~~~~~~~~~~~~-------------------~ 156 (197)
T 3lpw_A 104 LPPGKITLMDV-TRNSVSLSWEKPEHDGGSR-------ILGYIVEMQTKGSDKWATCATV-------------------K 156 (197)
T ss_dssp CCCSCEEEEEE-CSSCEEEEECCCSCCTTSC-------CCEEEEEEEETTCSCCEEEEEE-------------------S
T ss_pred CCCcccEEEec-cCCeEEEEecCCCcCCCCc-------ccEEEEEEEeCCCCceEEeecc-------------------c
Confidence 46777776533 3689999998643211100 0123466665443332221100 1
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCc
Q 008663 164 IHHVRLTGLKPDTLYHYQCGDPSIPAM 190 (558)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~ 190 (558)
...+.+++|+|+|.|.|+|...+..+.
T Consensus 157 ~~~~~~~~L~p~t~Y~~~V~A~n~~G~ 183 (197)
T 3lpw_A 157 VTEATITGLIQGEEYSFRVSAQNEKGI 183 (197)
T ss_dssp SSEEEECCCCTTCEEEEEEEEEETTEE
T ss_pred ccEEEeCCcCCCCEEEEEEEEEeCCcc
Confidence 124578999999999999976553333
No 135
>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1
Probab=91.86 E-value=0.14 Score=43.75 Aligned_cols=37 Identities=27% Similarity=0.346 Sum_probs=29.2
Q ss_pred EEEeCCCCCCCEEEEEEecCCCC---CccceeEEEcCCCC
Q 008663 166 HVRLTGLKPDTLYHYQCGDPSIP---AMSGTYCFRTMPDS 202 (558)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~P~~ 202 (558)
.++++||+|+|+|.+||...+.. .+|+...++|.+.+
T Consensus 76 ~~~v~gL~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~p 115 (120)
T 1wfu_A 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRES 115 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCCC
T ss_pred EEEECCCCCCCEEEEEEEEECCCCCCCCCccEeeEcCCCC
Confidence 36789999999999999765433 56778899998753
No 136
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=91.42 E-value=1.5 Score=42.27 Aligned_cols=90 Identities=16% Similarity=0.083 Sum_probs=51.5
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccCc
Q 008663 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (558)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~ 163 (558)
..|..+.+.-.. ++++.|+|.-.... ...=.|+|............ .. ..-
T Consensus 22 ~~P~~l~~~~~~-~~sv~l~W~~p~~~-----------~~~Y~v~~~~~~~~~~~~~~----~~-------------~~~ 72 (290)
T 3r8q_A 22 PAPTDLKFTQVT-PTSLSAQWTPPNVQ-----------LTGYRVRVTPKEKTGPMKEI----NL-------------APD 72 (290)
T ss_dssp CCCEEEEEEEEC-SSCEEEEEECCSSC-----------CCEEEEEEEESSSSSCCEEE----EE-------------CTT
T ss_pred CCCCceEEEECC-CCEEEEEEeCCCCC-----------eeEEEEEEEeCCCCCceEEE----Ec-------------CCC
Confidence 468888775443 78999999864210 01234667654422211100 00 112
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCcc--ceeEEEcCCCC
Q 008663 164 IHHVRLTGLKPDTLYHYQCGDPSIPAMS--GTYCFRTMPDS 202 (558)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S--~~~~F~T~P~~ 202 (558)
...+.|++|+|+|.|.++|...+..+.+ ....++|.+.+
T Consensus 73 ~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~~~~~t~~~~ 113 (290)
T 3r8q_A 73 SSSVVVSGLMVATKYEVSVYALKDTLTSRPAQGVVTTLENV 113 (290)
T ss_dssp CCEEEECSCCSSCEEEEEEEEEETTEECCCEEEEEECCCCC
T ss_pred ccEEEeCCCCCCCEEEEEEEEEeCCCCCCCcceeEecCCCC
Confidence 3467899999999999999754433222 24567776544
No 137
>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1
Probab=91.18 E-value=1.1 Score=37.54 Aligned_cols=23 Identities=22% Similarity=0.316 Sum_probs=19.2
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC
Q 008663 164 IHHVRLTGLKPDTLYHYQCGDPS 186 (558)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~ 186 (558)
...++|++|+|+|+|.+||...+
T Consensus 70 ~~~~~v~~L~p~t~Y~FRV~A~N 92 (115)
T 2ic2_A 70 SFTASVTDLKPQHTYRFRILAVY 92 (115)
T ss_dssp EEEEEECSCCSSEEEEEEEEEEE
T ss_pred eeEEEeCCCCCCCEEEEEEEEEe
Confidence 34678999999999999997544
No 138
>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=91.15 E-value=1.8 Score=36.25 Aligned_cols=34 Identities=15% Similarity=0.069 Sum_probs=24.4
Q ss_pred eCCCCCCCEEEEEEecCCCC---Cccce-eEEEcCCCC
Q 008663 169 LTGLKPDTLYHYQCGDPSIP---AMSGT-YCFRTMPDS 202 (558)
Q Consensus 169 l~gL~P~T~Y~Yrvg~~~~~---~~S~~-~~F~T~P~~ 202 (558)
+.+|+|+|.|.|||...+.. .+|.. ..|+|.+..
T Consensus 78 i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~T~~~~ 115 (127)
T 1uey_A 78 QLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASE 115 (127)
T ss_dssp EECCCTTCEECCEEEEEESSCBCCCCSCCCCEECCCSS
T ss_pred EecCCCCCEEEEEEEEEeCCccCCccccccceEcCCCC
Confidence 56999999999999654322 45555 478887643
No 139
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=91.05 E-value=1.3 Score=44.33 Aligned_cols=93 Identities=11% Similarity=0.049 Sum_probs=53.1
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccCc
Q 008663 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (558)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~ 163 (558)
..|..+.+.-..+..++.|+|.-... + ....=.|+|....+....... ..+ .+.
T Consensus 3 ~~P~~l~~~~~~~~~sv~l~W~~~~~--~--------~i~~Y~v~~~~~~~~~~~~~~---~~~-------------~~~ 56 (368)
T 1fnf_A 3 SPPTNLHLEANPDTGVLTVSWERSTT--P--------DITGYRITTTPTNGQQGNSLE---EVV-------------HAD 56 (368)
T ss_dssp CCCEEEEEEECSSSSCEEEEEECCSC--S--------SCCEEEEEEEETTTCSSCCEE---EEE-------------CTT
T ss_pred CCCcceEEEecCCCcEEEEEEeCCCC--C--------CceEEEEEEEECCCCCCceeE---EEe-------------cCC
Confidence 35888887754433579999986431 1 011235677655432211000 000 112
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCccceeEEEcCCCC
Q 008663 164 IHHVRLTGLKPDTLYHYQCGDPSIPAMSGTYCFRTMPDS 202 (558)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~P~~ 202 (558)
...+.|++|+|+|.|.|||...+..+.|...+..+.+..
T Consensus 57 ~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~~~~ 95 (368)
T 1fnf_A 57 QSSCTFDNLSPGLEYNVSVYTVKDDKESVPISDTIIPAV 95 (368)
T ss_dssp CCEEECCCCCTTSCEEEEEEEEETTEECCCEEEEECCCC
T ss_pred cCEEEECCCCCCCEEEEEEEEEcCCCccCceeeeecCCC
Confidence 346789999999999999976554455655555555443
No 140
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=91.01 E-value=0.62 Score=50.39 Aligned_cols=37 Identities=32% Similarity=0.313 Sum_probs=28.8
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCC
Q 008663 166 HVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDS 202 (558)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~ 202 (558)
.++|+||+|+|.|.+||...+. +.+|+...|+|++..
T Consensus 496 s~~l~gL~P~T~Y~frVrA~n~~G~Gp~S~~v~~~T~~~~ 535 (536)
T 3fl7_A 496 SVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQTLSPE 535 (536)
T ss_dssp EEECCSCCSSCEEEEEEEEECC---CEECCCEEEECCC--
T ss_pred EEEECCCCCCCEEEEEEEEEcCCcccCCCCCEEEEeCCCC
Confidence 5689999999999999965432 357889999998754
No 141
>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=91.01 E-value=2.5 Score=35.62 Aligned_cols=88 Identities=16% Similarity=0.093 Sum_probs=48.1
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccCcE
Q 008663 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (558)
Q Consensus 85 ~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~~ 164 (558)
.|..+++.-.. +++.|+|.-.....|. + ..=.|+|.... ..... .. ...-.
T Consensus 30 ~P~~l~~~~~~--~sv~l~W~~P~~~~g~-i-------~~Y~v~y~~~~-~~~~~-----~~-------------~~~~~ 80 (126)
T 1x5i_A 30 VPSSLHVRPLV--TSIVVSWTPPENQNIV-V-------RGYAIGYGIGS-PHAQT-----IK-------------VDYKQ 80 (126)
T ss_dssp SCSEEEEEEET--TEEEEEEECCSCTTBC-C-------CEEEEEECSSC-GGGEE-----EE-------------CCTTC
T ss_pred CCCeeEEEecC--CEEEEEEcCCCCCCCC-E-------eEEEEEEEcCC-CCceE-----EE-------------eCCCe
Confidence 68888776653 8999999864321110 0 12246665321 10100 00 01223
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCccc--eeEEEcCCC
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPSIPAMSG--TYCFRTMPD 201 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~P~ 201 (558)
...+|++|+|+|.|.+||...+..+.+. ...++|.+.
T Consensus 81 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~T~~~ 119 (126)
T 1x5i_A 81 RYYTIENLDPSSHYVITLKAFNNVGEGIPLYESAVTRPH 119 (126)
T ss_dssp CEEEECSCCSSCEECCEEEEECSSCBCCCCCCCEECCCC
T ss_pred eEEEEeCCCCCCEEEEEEEEEeCCccCcceeeEEecccC
Confidence 4568999999999999997654332221 234556544
No 142
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=91.00 E-value=0.53 Score=45.51 Aligned_cols=35 Identities=23% Similarity=0.261 Sum_probs=28.1
Q ss_pred EEEeCCCCCCCEEEEEEecCCCC--CccceeEEEcCC
Q 008663 166 HVRLTGLKPDTLYHYQCGDPSIP--AMSGTYCFRTMP 200 (558)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~~--~~S~~~~F~T~P 200 (558)
..+|+||+|+|.|.+||...+.. .+|+...|+|++
T Consensus 254 ~~~~~~L~p~t~Y~~~V~A~n~~Gg~~s~~~~~~T~~ 290 (290)
T 3l5i_A 254 EYTLSSLTSDTLYMVRMAAYTDEGGKDGPEFTFTTPK 290 (290)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEEEECCCEEEECCC
T ss_pred EEEeCCCCCCCEEEEEEEEEeCCCCCCCCceEeecCC
Confidence 56899999999999999654432 488889999964
No 143
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=90.94 E-value=0.62 Score=42.81 Aligned_cols=94 Identities=17% Similarity=0.193 Sum_probs=53.2
Q ss_pred CCCCeEEEEecC-CCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccC
Q 008663 84 FEPEQISVSLSS-AHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSG 162 (558)
Q Consensus 84 ~~P~qi~lt~~~-~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~ 162 (558)
..|..+.+...+ .++++.|+|.-.....|. + ..=.|+|........... ..... .+
T Consensus 107 ~~P~~~~~~~~~~s~~sv~l~W~~p~~~~g~-i-------~~Y~v~~~~~~~~~~~~~--~~~~~-------------~~ 163 (211)
T 3p4l_A 107 SPPKDVTVVSKEGKPKTIIVNWQPPSEANGK-I-------TGYIIYYSTDVNAEIHDW--VIEPV-------------VG 163 (211)
T ss_dssp SCCEEEEEEEETTEEEEEEEEEECCTTCCSC-C-------CEEEEEEESCTTSCGGGS--EEEEE-------------ES
T ss_pred CCCcceEEEecCCCCCEEEEEECCCCCCCCC-E-------EEEEEEEEECCCCCCCce--EEEEe-------------cC
Confidence 367788776654 368999999864321110 0 112466665443211100 00000 11
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCC---CCCccceeEEEcCC
Q 008663 163 IIHHVRLTGLKPDTLYHYQCGDPS---IPAMSGTYCFRTMP 200 (558)
Q Consensus 163 ~~h~v~l~gL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~P 200 (558)
-...+.|++|+|+|.|.+||...+ .+.+|+...|+|..
T Consensus 164 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~~~~ 204 (211)
T 3p4l_A 164 NRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 204 (211)
T ss_dssp SCSEEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECC-
T ss_pred CeeEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEccCcc
Confidence 233568899999999999996433 23677888888754
No 144
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=90.93 E-value=2.2 Score=40.83 Aligned_cols=91 Identities=21% Similarity=0.160 Sum_probs=50.5
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccCc
Q 008663 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (558)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~ 163 (558)
..|..+.+.-. ..+++.|+|.-.... ...=.|+|....+....... ... ..+-
T Consensus 106 ~~P~~l~~~~~-~~~sv~l~W~~p~~~-----------i~~Y~v~~~~~~~~~~~~~~-----~~~----------~~~~ 158 (283)
T 1tdq_A 106 DAPKNLRVGSR-TATSLDLEWDNSEAE-----------AQEYKVVYSTLAGEQYHEVL-----VPK----------GIGP 158 (283)
T ss_dssp CCCEEEEEEEE-CSSCEEEEEECCSSC-----------CSEEEEEEEETTCCCCEEEE-----EEC----------CSSS
T ss_pred CCCCceEEEec-CCCeEEEEecCCCCC-----------ccEEEEEEEeCCCCcceEEE-----CCC----------CCcc
Confidence 35666665432 367899999864311 11235666654432221110 000 0011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCccce--eEEEcCCC
Q 008663 164 IHHVRLTGLKPDTLYHYQCGDPSIPAMSGT--YCFRTMPD 201 (558)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~--~~F~T~P~ 201 (558)
...+.|++|+|+|.|.++|...+..+.|.. ..+.|.|.
T Consensus 159 ~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~~~~~t~~~ 198 (283)
T 1tdq_A 159 TTKTTLTDLVPGTEYGVGISAVMNSKQSIPATMNARTELD 198 (283)
T ss_dssp EEEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCC
T ss_pred cceEEEecCCCCCEEEEEEEEEeCCCCCcceEEEecCCCC
Confidence 567789999999999999976544444443 44555544
No 145
>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=90.90 E-value=0.85 Score=37.86 Aligned_cols=37 Identities=16% Similarity=0.168 Sum_probs=25.4
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC---Ccccee-EEEcCCC
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPSIP---AMSGTY-CFRTMPD 201 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~-~F~T~P~ 201 (558)
..++|++|+|+|+|.|||...+.. .+|..- .++|.+.
T Consensus 76 ~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~t~~~ 116 (121)
T 1wf5_A 76 TSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPES 116 (121)
T ss_dssp CEEEEESCCTTCEEEEEEEEEESSCEEEECCCCSCEECCCC
T ss_pred cEEEECCcCCCCEEEEEEEEEcCCccCCCcCCcceeEcCCC
Confidence 457889999999999999765432 334443 4666554
No 146
>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=90.75 E-value=1.3 Score=37.17 Aligned_cols=36 Identities=14% Similarity=0.046 Sum_probs=26.9
Q ss_pred EEEeCCCCCCCEEEEEEecC---CCCCccceeEEEcCCCC
Q 008663 166 HVRLTGLKPDTLYHYQCGDP---SIPAMSGTYCFRTMPDS 202 (558)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~---~~~~~S~~~~F~T~P~~ 202 (558)
.+.+. |+|+|.|.+||... +.+.+|+...|+|....
T Consensus 74 ~~~~~-L~~~t~Y~~~V~A~n~~G~Gp~S~~v~~~T~~~v 112 (117)
T 1wj3_A 74 SAELV-LPIKEDYIIEVKATTDGGDGTSSEQIRIPRITSS 112 (117)
T ss_dssp EEEEE-CCCSSCEEEEEEEEESSCCCCBCCCEEECCCCCC
T ss_pred EEEEE-CCCCCEEEEEEEEECCCccCCCCCCEEEEcCCCC
Confidence 45676 99999999999643 22467888899997643
No 147
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=90.63 E-value=1.3 Score=43.56 Aligned_cols=94 Identities=17% Similarity=0.004 Sum_probs=55.3
Q ss_pred CCCCCeEEEEecC-----CCCceEEEEEcCcccccCCCCCCCCCCCccEEEEe-ccCCCCceEEEeEEEEeeeecccCCc
Q 008663 83 GFEPEQISVSLSS-----AHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYG-TRRSQLNRKATGRSLVYSQLYPFLGL 156 (558)
Q Consensus 83 ~~~P~qi~lt~~~-----~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg-~~~~~~~~~~~g~~~~y~~~~~~~g~ 156 (558)
...|..+.+.... .++++.|+|..... .|. ....=.|+|. ...+..+..+...
T Consensus 203 p~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~-~~~-------~~l~Y~v~y~~~~~~~~w~~~~~~------------- 261 (313)
T 2d9q_B 203 LEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQP-GLH-------INQKCELRHKPQRGEASWALVGPL------------- 261 (313)
T ss_dssp CCCCEEEECCC-------CCSCEEEEEECCGG-GTT-------SCEEEEEEEEESSSCCCCEEEEEE-------------
T ss_pred cCcCceeEEEEecccccCCCCeEEEEECCCCC-CCc-------eeEEEEEEEccCCCCCCcEEcccc-------------
Confidence 3457666655432 46899999986432 111 0013457887 4443333322100
Q ss_pred cccccCcEEEEEeCCCCCCCEEEEEEecCC---CC---CccceeEEEcCCC
Q 008663 157 QNYTSGIIHHVRLTGLKPDTLYHYQCGDPS---IP---AMSGTYCFRTMPD 201 (558)
Q Consensus 157 ~~~~~~~~h~v~l~gL~P~T~Y~Yrvg~~~---~~---~~S~~~~F~T~P~ 201 (558)
....+.+.|++|+|+|+|.+||.... .+ .||+...|+|+..
T Consensus 262 ----~~~~~~~~l~~L~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~~ 308 (313)
T 2d9q_B 262 ----PLEALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTER 308 (313)
T ss_dssp ----CSCEEEEEECSCCSCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC-
T ss_pred ----cCcceEEEEeCCCCCCeEEEEEEeeECCCCCccCCCCCccceeCCcc
Confidence 11245678999999999999996432 12 4778889998764
No 148
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=90.16 E-value=1.3 Score=44.55 Aligned_cols=90 Identities=11% Similarity=0.059 Sum_probs=52.2
Q ss_pred CCCCeEEEEecCCCC-ceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccC
Q 008663 84 FEPEQISVSLSSAHD-SVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSG 162 (558)
Q Consensus 84 ~~P~qi~lt~~~~p~-s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~ 162 (558)
..|..|.+.-.. .+ ++.|+|.-... | ....=.|+|....+....... ... .+
T Consensus 4 ~~P~~l~~~~~~-~~~sv~l~W~~~~~--~--------~~~~Y~v~~~~~~~~~~~~~~---~~~-------------~~ 56 (375)
T 3t1w_A 4 SPPTNLHLEANP-DTGVLTVSWERSTT--P--------DITGYRITTTPTNGQQGNSLE---EVV-------------HA 56 (375)
T ss_dssp CCCEEEEEEEET-TTTEEEEEEECCSC--S--------SCCEEEEEEEETTCTTSCCEE---EEE-------------ET
T ss_pred CCCCccEEEecC-CCeEEEEEEeCCCC--C--------CeeeEEEEEEECCCCCCccee---EEc-------------CC
Confidence 357777776544 55 99999986431 1 011235677664432111100 000 11
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCCCCCccceeEEEcCC
Q 008663 163 IIHHVRLTGLKPDTLYHYQCGDPSIPAMSGTYCFRTMP 200 (558)
Q Consensus 163 ~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~P 200 (558)
-...+.|++|+|+|.|.++|...+..+.|.....++.+
T Consensus 57 ~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~~ 94 (375)
T 3t1w_A 57 DQSSCTFDNLSPGLEYNVSVYTVKDDKESVPISDTIIP 94 (375)
T ss_dssp TCCEEEECCCCTTCCEEEEEEEEETTEECCCEEEEECC
T ss_pred CccEEEEcCCcCCCEEEEEEEEEcCCCCCCcEEeeEcC
Confidence 22456789999999999999766545666666666544
No 149
>1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=89.76 E-value=1.7 Score=35.08 Aligned_cols=87 Identities=20% Similarity=0.269 Sum_probs=53.1
Q ss_pred CCCCeEEEEecC-CCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCC-CceEEEeEEEEeeeecccCCcccccc
Q 008663 84 FEPEQISVSLSS-AHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQ-LNRKATGRSLVYSQLYPFLGLQNYTS 161 (558)
Q Consensus 84 ~~P~qi~lt~~~-~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~-~~~~~~g~~~~y~~~~~~~g~~~~~~ 161 (558)
.-|-|+.++-+. .|++--|.|...+.. |+ ..-.+.|...... .++.+. -.
T Consensus 6 ~gpa~v~is~~~s~pdsh~iqW~~~s~s------~I----~eyiL~~R~k~~~g~Wke~~------------------Ip 57 (98)
T 1oww_A 6 SGPVEVFITETPSQPNSHPIQWNAPQPS------HI----SKYILRWRPKNSVGRWKEAT------------------IP 57 (98)
T ss_dssp CCCCEEECCCCSSCTTCEEEEEECCSSS------CE----EEEEEEEEETTCSSCCEEEE------------------EC
T ss_pred CcceEEEecCCCCCCCccceEEecCCCC------Cc----eEEEEEEEEcCCCCceeEEE------------------ec
Confidence 458888887664 379999999985431 10 1223444443322 112111 12
Q ss_pred CcEEEEEeCCCCCCCEEEEEEecCCCCCccce--eEEEc
Q 008663 162 GIIHHVRLTGLKPDTLYHYQCGDPSIPAMSGT--YCFRT 198 (558)
Q Consensus 162 ~~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~--~~F~T 198 (558)
+.+..-+|+||+||.+|.=++-+..--+|+++ +.|.|
T Consensus 58 ~h~nSYtI~GL~P~~~YE~qv~S~~ryG~~Evs~f~FtT 96 (98)
T 1oww_A 58 GHLNSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTT 96 (98)
T ss_dssp SSCCEEEECSCCSSEEEEEEEEEEESSSCEEEEEEEEEE
T ss_pred CccceEEEecCCCCcEEEEEEEEeeccCcccceEEEEEe
Confidence 34455689999999999999987665577765 55555
No 150
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=89.69 E-value=1 Score=41.42 Aligned_cols=22 Identities=27% Similarity=0.347 Sum_probs=18.6
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPS 186 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~ 186 (558)
.+++|+||+|+|+|.++|..-.
T Consensus 157 t~~~l~gL~p~t~Y~~~V~A~~ 178 (195)
T 2qbw_A 157 STATISGLKPGVDYTITVYAYS 178 (195)
T ss_dssp SEEEECSCCTTCEEEEEEEEES
T ss_pred CEEEeCCCCCCCEEEEEEEEEe
Confidence 4678999999999999997543
No 151
>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens}
Probab=89.68 E-value=0.96 Score=38.33 Aligned_cols=74 Identities=19% Similarity=0.269 Sum_probs=43.3
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccCc
Q 008663 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (558)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~ 163 (558)
..|..+.+.- -+.+++.|+|.-.... ...=.|+|....+...... .. . .+-
T Consensus 30 ~~P~~l~v~~-~t~~Si~lsW~~p~~~-----------i~~Y~V~y~~~~~~~~~~~----~~----v---------~~~ 80 (121)
T 2ocf_D 30 DVPTKLEVVA-ATPTSLLISWDAPAVT-----------VRYYRITYGETGGNSPVQE----FT----V---------PGS 80 (121)
T ss_dssp CSCEEEEEEE-ECSSCEEEEEECCSSC-----------CCEEEEEEEETTTCSCBEE----EE----E---------ETT
T ss_pred CCCCccEEEe-cCCCEEEEEEcCCCCC-----------CcEEEEEEEECCCCCccEE----EE----e---------CCC
Confidence 4578887764 3468999999753211 0123466765443211100 00 0 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC
Q 008663 164 IHHVRLTGLKPDTLYHYQCGDPS 186 (558)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~ 186 (558)
.-.+.|+||+|+|+|.++|...+
T Consensus 81 ~t~~~l~gL~P~t~Y~~~V~A~~ 103 (121)
T 2ocf_D 81 KSTATISGLKPGVDYTITVYAVT 103 (121)
T ss_dssp CCEEEECCCCTTCEEEEEEEEEC
T ss_pred cCEEEeCCCCCCCEEEEEEEEEe
Confidence 23678999999999999997654
No 152
>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D*
Probab=89.68 E-value=0.85 Score=38.26 Aligned_cols=70 Identities=23% Similarity=0.365 Sum_probs=41.6
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCC-ceEEEeEEEEeeeecccCCccccccCc
Q 008663 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQL-NRKATGRSLVYSQLYPFLGLQNYTSGI 163 (558)
Q Consensus 85 ~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~-~~~~~g~~~~y~~~~~~~g~~~~~~~~ 163 (558)
.|..+.+.-- ..+++.|+|...... ...=.|+|....+.. .... . . .+-
T Consensus 6 ~P~~L~v~~~-t~~Sv~lsW~~p~g~-----------i~~Y~v~y~~~~~~~~~~~~-----~----v---------~~~ 55 (114)
T 3qwq_B 6 VPRDLEVVAA-TPTSLLISWDSGRGS-----------YQYYRITYGETGGNSPVQEF-----T----V---------PGP 55 (114)
T ss_dssp CCEEEEEEEE-ETTEEEEEEECCSCC-----------CSEEEEEEEESSCSSCCEEE-----E----E---------ETT
T ss_pred CCCceEEEec-CCCEEEEEEcCCcCc-----------ccEEEEEEEECCCCCccEEE-----E----e---------CCC
Confidence 5777776543 368999999863211 012347776654321 1110 0 0 011
Q ss_pred EEEEEeCCCCCCCEEEEEEec
Q 008663 164 IHHVRLTGLKPDTLYHYQCGD 184 (558)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~ 184 (558)
.-.+.|+||+|+|.|.++|..
T Consensus 56 ~ts~~l~gL~P~T~Y~v~V~A 76 (114)
T 3qwq_B 56 VHTATISGLKPGVDYTITVYA 76 (114)
T ss_dssp CCEEEECSCCTTCEEEEEEEE
T ss_pred cCEEEeCCCCCCCEEEEEEEE
Confidence 235789999999999999864
No 153
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=89.35 E-value=3.1 Score=39.78 Aligned_cols=101 Identities=16% Similarity=0.205 Sum_probs=55.9
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccCc
Q 008663 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (558)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~ 163 (558)
..|.++.+.--. .+++.|+|.-.. +. ...=.|+|.......... .... ...
T Consensus 16 ~~P~~l~~~~~~-~~sv~l~W~~~~---~~--------~~~Y~v~~~~~~~~~~~~----~~~~-------------~~~ 66 (283)
T 1tdq_A 16 DGPTQILVRDVS-DTVAFVEWTPPR---AK--------VDFILLKYGLVGGEGGKT----TFRL-------------QPP 66 (283)
T ss_dssp CCCEEEEEEEEC-SSCEEEEEECCS---SC--------CSEEEEEEEESSSSCCCE----EEEE-------------CTT
T ss_pred CCCcEEEEEecC-CCeEEEEEECCC---Cc--------eeEEEEEEEEecCCCCcE----EEEe-------------CCC
Confidence 357888765443 689999998643 10 112357775433211110 0000 112
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCcc--ceeEEEcCCCCCCCCCCeEEEEEec
Q 008663 164 IHHVRLTGLKPDTLYHYQCGDPSIPAMS--GTYCFRTMPDSSSTSYPSRIAIVGD 216 (558)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S--~~~~F~T~P~~~~~~~~~rfavigD 216 (558)
...+.|++|+|+|.|.++|...+..+.| ....|+|.|.+. ..+++..+++
T Consensus 67 ~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~t~p~~P---~~l~~~~~~~ 118 (283)
T 1tdq_A 67 LSQYSVQALRPGSRYEVSISAVRGTNESDASSTQFTTEIDAP---KNLRVGSRTA 118 (283)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCC---EEEEEEEECS
T ss_pred CCEEEecCCCCCCEEEEEEEEECCCCCCCCeeEEEECCCCCC---CceEEEecCC
Confidence 3356789999999999999765433333 345677766542 1345444443
No 154
>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.15 E-value=0.89 Score=37.93 Aligned_cols=88 Identities=10% Similarity=0.058 Sum_probs=47.4
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccCcE
Q 008663 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (558)
Q Consensus 85 ~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~~ 164 (558)
.|..+++.-.. +++.|+|.-.....|. + ..=.|+|..... ..... .. ..-.
T Consensus 20 ~P~~l~~~~~~--~sv~l~W~~P~~~ng~-i-------~gY~i~y~~~~~-~~~~~-----~~-------------~~~~ 70 (116)
T 2edb_A 20 QPSSLHVRPQT--NCIIMSWTPPLNPNIV-V-------RGYIIGYGVGSP-YAETV-----RV-------------DSKQ 70 (116)
T ss_dssp CCSCEEEEECS--SCEEEEECCCSCTTBC-C-------CEEEEEEEESST-TSEEE-----EE-------------ETTC
T ss_pred CCCCeEEEECC--CEEEEEEcCCCCCCCc-e-------eEEEEEEEeCCC-CeEEE-----Ee-------------CCCe
Confidence 57888776553 8999999754221110 0 122466654221 11110 00 0112
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCccc--eeEEEcCCC
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPSIPAMSG--TYCFRTMPD 201 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~P~ 201 (558)
..++|++|+|+|+|.+||...+..+.++ ...++|.+.
T Consensus 71 ~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~~~~~~~T~~~ 109 (116)
T 2edb_A 71 RYYSIERLESSSHYVISLKAFNNAGEGVPLYESATTRSI 109 (116)
T ss_dssp CEEEECSCCSSSBEEEEEEEEETTEECSCEEECCBCCCS
T ss_pred eEEEeCCCCCCCEEEEEEEEEeCCccCCCCcceeecccC
Confidence 3568899999999999997654333222 234555543
No 155
>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens}
Probab=88.90 E-value=0.87 Score=37.19 Aligned_cols=76 Identities=20% Similarity=0.232 Sum_probs=42.4
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccCcE
Q 008663 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (558)
Q Consensus 85 ~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~~ 164 (558)
.|..+++.-- +.+++.|+|.-.....|. ...=.|+|.......... . .. . .+-.
T Consensus 10 ~P~~l~v~~~-t~~Sv~lsW~~p~~~~g~--------i~~Y~v~y~~~~~~~~~~---~-~~----v---------~~~~ 63 (103)
T 3t04_D 10 VPTKLEVVDA-TPTSLKISWDAYYSSWQN--------VKYYRITYGETGGDSPVQ---E-FT----V---------PGYY 63 (103)
T ss_dssp CCCSCEEEEE-ETTEEEEECTTTTTTSCC--------CCEEEEEEEETTCSSCCE---E-EE----E---------ETTC
T ss_pred CCceeEEEec-CCCEEEEEccCCCCCCCc--------cceEEEEEEECCCCCccE---E-EE----c---------CCCc
Confidence 5777776532 368999999754311010 011246776543211110 0 00 0 1123
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPS 186 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~ 186 (558)
.++.|+||+|+|.|.++|...+
T Consensus 64 ts~~l~~L~p~t~Y~~~V~A~~ 85 (103)
T 3t04_D 64 STATISGLKPGVDYTITVYAYD 85 (103)
T ss_dssp CEEEECSCCTTCCEEEEEEEES
T ss_pred CEEEeCCCCCCCEEEEEEEEEe
Confidence 4678999999999999997553
No 156
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=88.73 E-value=2 Score=41.49 Aligned_cols=88 Identities=20% Similarity=0.105 Sum_probs=49.0
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccCc
Q 008663 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (558)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~ 163 (558)
..|..+.+.- ...+++.|+|.-.... ...=.|+|....+...... .. ...
T Consensus 114 ~~P~~l~~~~-~~~~sv~l~W~~p~~~-----------~~~Y~v~~~~~~~~~~~~~-----~~-------------~~~ 163 (290)
T 3r8q_A 114 SPPRRARVTD-ATETTITISWRTKTET-----------ITGFQVDAVPANGQTPIQR-----TI-------------KPD 163 (290)
T ss_dssp CCCEEEEEEE-ECSSCEEEEEECCSCC-----------CCEEEEEEEESSSCCCEEE-----EE-------------CTT
T ss_pred CCCceeEEEE-cCCCeEEEEEeCCCCc-----------ccEEEEEEEECCCCcceEE-----ec-------------CCC
Confidence 3577776653 2368899999863210 1123466655433221110 00 111
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCccc--eeEEEcCCC
Q 008663 164 IHHVRLTGLKPDTLYHYQCGDPSIPAMSG--TYCFRTMPD 201 (558)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~P~ 201 (558)
...+.|+||+|+|.|.++|...+..+.|. ...++|.|.
T Consensus 164 ~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~~~~~t~p~ 203 (290)
T 3r8q_A 164 VRSYTITGLQPGTDYKIYLYTLNDNARSSPVVIDASTAID 203 (290)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCC
T ss_pred ccEEEECCCCCCCEEEEEEEEEeCCcccCCEEEEecCCCC
Confidence 23467899999999999997554333443 345666654
No 157
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=88.59 E-value=1.9 Score=39.22 Aligned_cols=91 Identities=14% Similarity=0.162 Sum_probs=50.7
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCC-CceEEEeEEEEeeeecccCCccccccCc
Q 008663 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQ-LNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (558)
Q Consensus 85 ~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~-~~~~~~g~~~~y~~~~~~~g~~~~~~~~ 163 (558)
.|..+.+.- ..+++.|+|.-.... +..+ ..=.|+|....+. .+....... + + .
T Consensus 8 ~P~~~~~~~--~~~sv~l~W~~p~~~-~~~i-------~~Y~v~~~~~~~~~~w~~~~~~~-------~--~-------~ 61 (205)
T 1cfb_A 8 APKLTGITC--QADKAEIHWEQQGDN-RSPI-------LHYTIQFNTSFTPASWDAAYEKV-------P--N-------T 61 (205)
T ss_dssp CCEEEEEEE--CSSEEEEEEECCCCT-TSCC-------CEEEEEEEESSSTTCCEEEEEEE-------E--T-------T
T ss_pred CCCCcEEEe--cCCEEEEEEECcccC-CCce-------EEEEEEEecCCCCCCceeeeecc-------C--C-------C
Confidence 688888877 689999999864211 1100 1234677654321 222211110 0 0 1
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCcc-ceeEEEcCCCC
Q 008663 164 IHHVRLTGLKPDTLYHYQCGDPSI---PAMS-GTYCFRTMPDS 202 (558)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S-~~~~F~T~P~~ 202 (558)
.....+ +|+|+|.|.|||...+. ..+| ....++|.+..
T Consensus 62 ~~~~~~-~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~~T~~~~ 103 (205)
T 1cfb_A 62 DSSFVV-QMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDV 103 (205)
T ss_dssp CSEEEE-ECCSSEEEEEEEEEEETTEECCCCCCCCCEEECCCC
T ss_pred ceEEEE-eCCCCCEEEEEEEEEECCccCCCCCCceeEEcCCcC
Confidence 113346 99999999999965432 2455 45678887643
No 158
>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene}
Probab=88.42 E-value=1.4 Score=35.22 Aligned_cols=72 Identities=18% Similarity=0.272 Sum_probs=41.7
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCC-ceEEEeEEEEeeeecccCCccccccCc
Q 008663 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQL-NRKATGRSLVYSQLYPFLGLQNYTSGI 163 (558)
Q Consensus 85 ~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~-~~~~~g~~~~y~~~~~~~g~~~~~~~~ 163 (558)
.|..+++.-- ..+++.|+|.-.. |. ...=.|+|....+.. .... . . ++-
T Consensus 7 ~P~~l~v~~~-t~~Si~lsW~~p~---~~--------i~~Y~v~y~~~~~~~~~~~~-----~----v---------~~~ 56 (97)
T 3qht_C 7 VPTKLEVVAA-TPTSLLISWDASS---SS--------VSYYRITYGETGGNSPVQEF-----T----V---------PGS 56 (97)
T ss_dssp SSSSCEEEEE-ETTEEEEECCCCC---SS--------CCEEEEEEEESSSCSCCEEE-----E----E---------ETT
T ss_pred CCCceEEEec-CCCEEEEEEeCCC---CC--------CCEEEEEEEECCCCCccEEE-----E----e---------CCC
Confidence 5777766543 3689999997532 10 012246676544321 1110 0 0 112
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC
Q 008663 164 IHHVRLTGLKPDTLYHYQCGDPS 186 (558)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~ 186 (558)
...+.|+||+|+|.|.++|..-.
T Consensus 57 ~t~~~l~~L~p~t~Y~v~V~A~~ 79 (97)
T 3qht_C 57 SSTATISGLSPGVDYTITVYAYY 79 (97)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEE
T ss_pred cCEEEeCCCCCCCEEEEEEEEEe
Confidence 34678999999999999997543
No 159
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=88.08 E-value=2.4 Score=38.47 Aligned_cols=90 Identities=7% Similarity=-0.037 Sum_probs=49.4
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCcc--cccCCCCCCCCCCCccEEEEeccCCCC-ceEEEeEEEEeeeecccCCccccc
Q 008663 84 FEPEQISVSLSSAHDSVWISWITGEF--QIGNNLKPLDPKSVVSVVRYGTRRSQL-NRKATGRSLVYSQLYPFLGLQNYT 160 (558)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~V~W~T~~~--~~g~~~~~~~p~~~~~~V~yg~~~~~~-~~~~~g~~~~y~~~~~~~g~~~~~ 160 (558)
..|..+.+.- ..++++.|+|.-... .-|. ...=.|+|....... ..... . .
T Consensus 106 ~~P~~~~~~~-~~~~sv~l~W~~p~~~~~ng~--------i~~Y~v~~~~~~~~~~~~~~~----~-------------~ 159 (205)
T 1cfb_A 106 KNPDNVVGQG-TEPNNLVISWTPMPEIEHNAP--------NFHYYVSWKRDIPAAAWENNN----I-------------F 159 (205)
T ss_dssp CCCSCCEEEC-SSTTCEEEECCCCCGGGTCSS--------SCEEEEEEEESSTTCCCEEEE----E-------------C
T ss_pred CCCeeeEeec-CCCCeEEEEEECCCccccCCC--------ceEEEEEEEECCCCCCcEEEE----e-------------c
Confidence 3577776553 346899999986431 1110 012246666544332 11110 0 0
Q ss_pred cCcEEEEEeCCCCCCCEEEEEEecCCCC---C-ccceeEEEcC
Q 008663 161 SGIIHHVRLTGLKPDTLYHYQCGDPSIP---A-MSGTYCFRTM 199 (558)
Q Consensus 161 ~~~~h~v~l~gL~P~T~Y~Yrvg~~~~~---~-~S~~~~F~T~ 199 (558)
......+.|++|+|+|.|.+||...+.. . .|+...++|.
T Consensus 160 ~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ss~~v~~~T~ 202 (205)
T 1cfb_A 160 DWRQNNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSG 202 (205)
T ss_dssp CTTCCEEEECSCCSSCEEEEEEEEEETTEECSSCCCCEEEESS
T ss_pred CCCccEEEEcCCCCCcEEEEEEEEEcCCCcCCCCCCcEEEecC
Confidence 1122456789999999999999654422 2 3556666664
No 160
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=88.00 E-value=2 Score=39.31 Aligned_cols=79 Identities=20% Similarity=0.203 Sum_probs=44.0
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccCcE
Q 008663 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (558)
Q Consensus 85 ~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~~ 164 (558)
.|..+.+.-. ..+++.|+|.-... | ....=.|+|....+..... .... .+-.
T Consensus 116 ~P~~l~~~~~-~~~sv~l~W~~p~~--~--------~i~~Y~v~~~~~~~~~~~~----~~~~-------------~~~~ 167 (203)
T 2gee_A 116 PPTDLRFTNI-GPDTMRVTWAPPPS--I--------DLTNFLVRYSPVKNEEDVA----ELSI-------------SPSD 167 (203)
T ss_dssp CCEEEEEEEE-ETTEEEEEEECCSS--C--------CCSEEEEEEEETTCGGGCE----EEEE-------------CTTC
T ss_pred CCCceEEEEc-CCCEEEEEEcCCCC--C--------CccEEEEEEEECCCCCccE----EEEc-------------CCCc
Confidence 5777765433 36899999986421 1 0112346666533221111 0000 1123
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCcc
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPSIPAMS 191 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S 191 (558)
..+.|+||+|+|.|.++|......+.|
T Consensus 168 ~~~~i~~L~p~t~Y~~~V~A~~~~g~s 194 (203)
T 2gee_A 168 NAVVLTNLLPGTEYVVSVSSVYEQHES 194 (203)
T ss_dssp CEEEECSCCTTCEEEEEEEEEETTEEC
T ss_pred CEEEECCCCCCCEEEEEEEEecCCCcC
Confidence 457889999999999999765433333
No 161
>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=87.67 E-value=0.7 Score=39.31 Aligned_cols=39 Identities=21% Similarity=0.098 Sum_probs=30.4
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC---CCCccceeEEEcCCCC
Q 008663 164 IHHVRLTGLKPDTLYHYQCGDPS---IPAMSGTYCFRTMPDS 202 (558)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~P~~ 202 (558)
..++.|+||+|+|.|.++|..-+ .+..|+...|+|+...
T Consensus 74 ~~~~~l~~L~p~T~Y~~~V~A~n~~G~Gp~S~~v~~~T~e~v 115 (120)
T 1ujt_A 74 ERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEES 115 (120)
T ss_dssp CCEEEEESCCSSEEEEEEEEEESSSCCCCCCCCEEEEECSSC
T ss_pred cCEEEECCCCCCCEEEEEEEEECCCccCCCCCCEEEECCCCC
Confidence 35678999999999999995432 2467888999997654
No 162
>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=87.57 E-value=2 Score=35.42 Aligned_cols=24 Identities=25% Similarity=0.279 Sum_probs=19.5
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC
Q 008663 164 IHHVRLTGLKPDTLYHYQCGDPSI 187 (558)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~ 187 (558)
...+.|++|+|+|.|.+||...+.
T Consensus 73 ~~~~~i~~L~p~t~Y~~~V~A~n~ 96 (119)
T 1wfn_A 73 TLEYRVTGLTALTTYTIEVAAMTS 96 (119)
T ss_dssp CCEEEEESCCTTCEEEEEEEEECS
T ss_pred ceEEEEcCCCCCCEEEEEEEEEcC
Confidence 346788999999999999976553
No 163
>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens}
Probab=87.09 E-value=1.8 Score=39.95 Aligned_cols=77 Identities=16% Similarity=0.160 Sum_probs=42.5
Q ss_pred CCCCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCC-CCceEEEeEEEEeeeecccCCccccc
Q 008663 82 EGFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRS-QLNRKATGRSLVYSQLYPFLGLQNYT 160 (558)
Q Consensus 82 ~~~~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~-~~~~~~~g~~~~y~~~~~~~g~~~~~ 160 (558)
....|..+++.....++++.|+|...... . ....-.|+|....+ ..+..+.-.
T Consensus 109 kp~pP~~l~v~~~~~~~~l~l~W~~P~~~--~-------~~l~yev~y~~~~~~~~w~~~~~~----------------- 162 (206)
T 3v6o_A 109 KPLPPSSVKAEITINIGLLKISWEKPVFP--E-------NNLQFQIRYGLSGKEVQWKMYEVY----------------- 162 (206)
T ss_dssp CCCCCCSCEEEEETTTTEEEEEC-----------------CEEEEEEEEESSSSCCCEEEEEC-----------------
T ss_pred cCCCCCceEeEEecCCCeEEEEECCCCCC--C-------CcEEEEEEEEECCCCCceEEEecc-----------------
Confidence 34568888877665578999999864321 0 01234577766542 222221100
Q ss_pred cCcEEEEEeCCCCCCCEEEEEEec
Q 008663 161 SGIIHHVRLTGLKPDTLYHYQCGD 184 (558)
Q Consensus 161 ~~~~h~v~l~gL~P~T~Y~Yrvg~ 184 (558)
..-...+.|.+|+|+|+|..||..
T Consensus 163 ~~~~~~~~l~~L~p~t~Y~vqVRa 186 (206)
T 3v6o_A 163 DAKSKSVSLPVPDLCAVYAVQVRC 186 (206)
T ss_dssp C---CEEEECCSCTTSCEEEEEEE
T ss_pred cCcceeEEeecCCCCCEEEEEEEE
Confidence 001235789999999999999964
No 164
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=87.03 E-value=3.1 Score=41.59 Aligned_cols=37 Identities=22% Similarity=0.228 Sum_probs=27.1
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC---CccceeEEEcCCCC
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPSIP---AMSGTYCFRTMPDS 202 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~P~~ 202 (558)
..+.|++|+|+|.|.+||...+.. .+| ...|+|.|.+
T Consensus 349 ~~~~i~~L~~~t~Y~~~V~A~n~~G~s~~s-~~~~~T~~~P 388 (389)
T 2jll_A 349 DHIILEHLQWTMGYEVQITAANRLGYSEPT-VYEFSMPPKP 388 (389)
T ss_dssp CEEEECSCCTTCEEEEEEEEEC-CCBCCCE-EEEEECCCCC
T ss_pred ceEEeCCcCCCCEEEEEEEEEcCCcCCCce-eeEecCCCCC
Confidence 456889999999999999755433 344 3489998764
No 165
>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens}
Probab=85.97 E-value=2.7 Score=39.67 Aligned_cols=33 Identities=15% Similarity=0.277 Sum_probs=21.6
Q ss_pred EEeCCCCCCCEEEEEEecCCCC---CccceeEEEcC
Q 008663 167 VRLTGLKPDTLYHYQCGDPSIP---AMSGTYCFRTM 199 (558)
Q Consensus 167 v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~ 199 (558)
.+++||+|+|.|.|||..-+.. ...+...+||.
T Consensus 202 yt~~gLk~~TeYsF~V~A~d~~G~~Ss~e~vtVrTl 237 (238)
T 2w1n_A 202 YTFKKLNRHTIYNFKIAAKYSNGEVSSKESLTLRTA 237 (238)
T ss_dssp EEECSCCTTCEEEEEEEEEETTSCBCCCEEEEEECC
T ss_pred EEecCCCCCCEEEEEEEEEeCCCCccccCcEEEEec
Confidence 3679999999999999643211 12244556653
No 166
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=85.94 E-value=1.1 Score=47.76 Aligned_cols=96 Identities=17% Similarity=0.166 Sum_probs=56.0
Q ss_pred CCCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccC
Q 008663 83 GFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSG 162 (558)
Q Consensus 83 ~~~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~ 162 (558)
+..|..|.+.- ..++++.|+|.......|. ...=.|+|....+..+... .... + ...
T Consensus 387 P~PP~nl~v~~-~s~~sl~LsW~pP~~~~g~--------~l~YeV~Yr~~~~~~w~~~----~~~~------~----~~~ 443 (488)
T 2q7n_A 387 PHDPTSLKVKD-INSTVVTFSWYLPGNFTKI--------NLLCQIEICKANSKKEVRN----ATIR------G----AED 443 (488)
T ss_dssp CCCCEEEEEEE-CSTTCEEEEEEEEEECSSS--------EEEEEEEEBCTTSCCEEEE----EEEE------C----CEE
T ss_pred CCCCeEEEEEe-cCCCEEEEEEeCCCCCCCc--------ceEEEEEEEECCCCCceEE----EEEe------c----CCC
Confidence 44677777654 3478999999875322110 0123467766543221110 0000 0 001
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCC--C---CCccceeEEEcCCC
Q 008663 163 IIHHVRLTGLKPDTLYHYQCGDPS--I---PAMSGTYCFRTMPD 201 (558)
Q Consensus 163 ~~h~v~l~gL~P~T~Y~Yrvg~~~--~---~~~S~~~~F~T~P~ 201 (558)
..+.+.|.+|+|+|+|..||.... . ..||+...|+|++.
T Consensus 444 ~~~~v~l~~L~P~T~Y~~rVRA~~~g~G~WS~WS~~v~~~T~e~ 487 (488)
T 2q7n_A 444 STYHVAVDKLNPYTAYTFRVRCSSKTFWKWSRWSDEKRHLTTEA 487 (488)
T ss_dssp EEEEEEECSCCSSCCBBCCEEEEESSCSSCCCCCCCCCBCCCCC
T ss_pred cEEEEEeCCCCCCceEEEEEEEEECCCCCCCCCcCCEeEECCCC
Confidence 346678999999999999985332 2 26788888999764
No 167
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=85.33 E-value=2.9 Score=37.82 Aligned_cols=88 Identities=19% Similarity=0.287 Sum_probs=48.4
Q ss_pred CCCeEEEEe-cCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCC-CceEEEeEEEEeeeecccCCccccccC
Q 008663 85 EPEQISVSL-SSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQ-LNRKATGRSLVYSQLYPFLGLQNYTSG 162 (558)
Q Consensus 85 ~P~qi~lt~-~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~-~~~~~~g~~~~y~~~~~~~g~~~~~~~ 162 (558)
.|.++.++- +..++++.|+|.-.. +..+ ..=.|+|...... ..... .. .+
T Consensus 2 ~P~~l~v~~v~~~~~si~l~W~~p~---~~~i-------~~Y~v~~~~~~~~~~~~~~-----~~-------------~~ 53 (201)
T 2ha1_A 2 GPVEVFITETPSQPNSHPIQWNAPQ---PSHI-------SKYILRWRPKNSVGRWKEA-----TI-------------PG 53 (201)
T ss_dssp CCCEEECCSCSCCSSCEEEEEECCS---STTC-------CEEEEEEEETTCSSCCEEE-----EE-------------CT
T ss_pred CceeEEEEecCCCCCEEEEEEeCCC---CCCc-------eEEEEEEEECCCCCceEEE-----ec-------------CC
Confidence 367776543 223789999998642 1111 1235677654321 11111 00 11
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCCCCCcc--ceeEEEcCC
Q 008663 163 IIHHVRLTGLKPDTLYHYQCGDPSIPAMS--GTYCFRTMP 200 (558)
Q Consensus 163 ~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S--~~~~F~T~P 200 (558)
-...+.|+||+|+|.|.+||...+..+.+ ....|+|.+
T Consensus 54 ~~~~~~i~~L~p~t~Y~~~V~a~n~~G~~~~~~~~~~t~~ 93 (201)
T 2ha1_A 54 HLNSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTTTS 93 (201)
T ss_dssp TCCEEEECSCCTTEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred CccEEEecCCCCCCEEEEEEEEEecccccCceeEEEecCC
Confidence 12367899999999999999765432332 244566643
No 168
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=85.16 E-value=4.4 Score=39.98 Aligned_cols=92 Identities=13% Similarity=0.028 Sum_probs=53.1
Q ss_pred CCCCCeEEEEecC-CCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCcccccc
Q 008663 83 GFEPEQISVSLSS-AHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTS 161 (558)
Q Consensus 83 ~~~P~qi~lt~~~-~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~ 161 (558)
...|..+.+.... +++++.|+|......... . + ...=.|+|.......+..+.- .
T Consensus 197 P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~-~----~-~~~Y~V~yr~~~~~~W~~~~~------------------~ 252 (325)
T 1n26_A 197 PDPPANITVTAVARNPRWLSVTWQDPHSWNSS-F----Y-RLRFELRYRAERSKTFTTWMV------------------K 252 (325)
T ss_dssp CCCCEEEEEEECTTCTTCEEEEEECCTTCCCS-S----S-CEEEEEEEEETTCSCCEEEEC------------------G
T ss_pred CCCCcceEEEEecCCCCEEEEEECCCCccCCC-c----E-eEEEEEEEEeCCCCCCEEEcc------------------c
Confidence 3468888777654 468999999875321000 0 0 012347776654333322110 0
Q ss_pred CcEEEEEeCCCCCCCEEEEEEecCCC------CCccceeEEEc
Q 008663 162 GIIHHVRLTGLKPDTLYHYQCGDPSI------PAMSGTYCFRT 198 (558)
Q Consensus 162 ~~~h~v~l~gL~P~T~Y~Yrvg~~~~------~~~S~~~~F~T 198 (558)
..-..+.|.+|+|+|.|.+||...+. ..||+...++|
T Consensus 253 ~~~~~~~l~~L~p~t~Y~~rVrA~n~~g~G~~S~wS~~~~~~~ 295 (325)
T 1n26_A 253 DLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAMGTP 295 (325)
T ss_dssp GGCSEEEESSCCTTCCEEEEEEEEETTTBSCCCCCCCCEEECC
T ss_pred CCceEEEEeCCCCCCeEEEEEEEecCCCCCCCcCCCCccceec
Confidence 11235678999999999999965431 25666666655
No 169
>3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens}
Probab=84.76 E-value=3.4 Score=38.71 Aligned_cols=103 Identities=15% Similarity=0.190 Sum_probs=55.3
Q ss_pred CCCCCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccc
Q 008663 81 VEGFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYT 160 (558)
Q Consensus 81 ~~~~~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~ 160 (558)
+....|..+.+.. .+.+.|+|.......- ...+. ....=.|+|....+.-...-.+. ... .
T Consensus 99 Vkp~PP~nltv~~---~~~l~lsW~~P~~~p~--~~~~~-~~L~Yevryr~~~~~W~~~~~~~--~~~-----------~ 159 (219)
T 3tgx_A 99 IKPAPPFDVTVTF---SGQYQISWRSDYEDPA--FYMLK-GKLQYELQYRNRGDPWAVSPRRK--LIS-----------V 159 (219)
T ss_dssp BCCCCCEEEEEEE---SSSEEEEEECGGGSGG--GGGGT-TSEEEEEEEEETTSCTTSCCEEE--EEC-----------S
T ss_pred EEeCCCCceEEEe---CCCEEEEEeCCcCCcc--ccccc-cCEEEEEEEecCCCCceecccce--eEe-----------c
Confidence 3345678777763 3689999997532100 00000 01124577776653211100011 000 1
Q ss_pred cCcEEEEEeCCCCCCCEEEEEEecCCC------C---CccceeEEEcCCCC
Q 008663 161 SGIIHHVRLTGLKPDTLYHYQCGDPSI------P---AMSGTYCFRTMPDS 202 (558)
Q Consensus 161 ~~~~h~v~l~gL~P~T~Y~Yrvg~~~~------~---~~S~~~~F~T~P~~ 202 (558)
.+....+.+.+|+|+|+|..||..... + .||+...|+|.++.
T Consensus 160 ~~~~~~~~~~~L~p~t~Y~vqVRa~~~~g~~~~G~WSeWS~~~~~~T~~~~ 210 (219)
T 3tgx_A 160 DSRSVSLLPLEFRKDSSYELQVRAGPMPGSSYQGTWSEWSDPVIFQTQSEE 210 (219)
T ss_dssp SCSEEEECTTSSCSSCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCC--
T ss_pred CCCEEEEEeccCCCCCEEEEEEEEeeCCCCCCCCcCcCCCCCeEEECCchh
Confidence 123456678899999999999953211 2 56889999998753
No 170
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=84.39 E-value=2.5 Score=38.54 Aligned_cols=33 Identities=15% Similarity=0.036 Sum_probs=22.8
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC---CccceeEEE
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPSIP---AMSGTYCFR 197 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~ 197 (558)
..+.|++|+|+|.|.+||...+.. .+|+...++
T Consensus 165 ~~~~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~~~~~ 200 (209)
T 2vkw_A 165 DHVMLKSLDWNAEYEVYVVAENQQGKSKAAHFVFRT 200 (209)
T ss_dssp CEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEEC
T ss_pred cEEEecCCCCCCEEEEEEEEEeCCccCCcchhhhhh
Confidence 356899999999999999755433 344444443
No 171
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=83.58 E-value=2.8 Score=45.61 Aligned_cols=69 Identities=13% Similarity=0.159 Sum_probs=42.7
Q ss_pred CCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccCcEEEEEeCCCCCCC
Q 008663 97 HDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGIIHHVRLTGLKPDT 176 (558)
Q Consensus 97 p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~~h~v~l~gL~P~T 176 (558)
.+++.++|.-....=|..+ ..=.|++....+..+..+. ... .. ..+++||.||+
T Consensus 23 ~~sv~L~W~~P~~DGgs~I-------~~Y~vE~~~~~~~~W~~v~-~~~----------------~t--~~~V~~L~~g~ 76 (573)
T 3uto_A 23 DEAVILSWKPPALDGGSLV-------TNYTIEKREAMGGSWSPCA-KSR----------------YT--YTTIEGLRAGK 76 (573)
T ss_dssp SSCEEEEEECCSCCSSSCC-------CEEEEEEEESSSCCCEEEE-EES----------------SS--EEEECCCCTTC
T ss_pred CCEEEEEECCCCcCCCCcc-------cEEEEEEEECCCCceEEec-ccc----------------CC--EEEeCCCCCCC
Confidence 6899999986432112111 1235777777776676552 210 01 24679999999
Q ss_pred EEEEEEecCCCCCcc
Q 008663 177 LYHYQCGDPSIPAMS 191 (558)
Q Consensus 177 ~Y~Yrvg~~~~~~~S 191 (558)
.|.|||...+..++|
T Consensus 77 ~Y~FRV~A~N~~G~s 91 (573)
T 3uto_A 77 QYEFRIIAENKHGQS 91 (573)
T ss_dssp EEEEEEEEEETTEEC
T ss_pred cEeEEEEEEcCceEc
Confidence 999999866544444
No 172
>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=83.51 E-value=0.58 Score=38.30 Aligned_cols=22 Identities=27% Similarity=0.311 Sum_probs=18.6
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPS 186 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~ 186 (558)
..++|+||+|+|.|.++|....
T Consensus 61 ~~~~l~~L~p~t~Y~~~V~A~~ 82 (105)
T 2ekj_A 61 SHVTLPDLQAATKYRVLVSAIY 82 (105)
T ss_dssp SEEEECSCCSSCCCBCBBCBBC
T ss_pred CEEEeCCCCCCCEEEEEEEEEe
Confidence 4678999999999999997654
No 173
>2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A
Probab=83.43 E-value=1.9 Score=35.05 Aligned_cols=27 Identities=19% Similarity=0.132 Sum_probs=19.8
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCcc
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPSIPAMS 191 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S 191 (558)
-.+.|+||+|+|.|...|..-.....|
T Consensus 59 ~s~~l~~L~PgT~Y~V~v~a~~~~~~S 85 (95)
T 2h41_A 59 TSVNIPDLLPGRKYIVNVYQISEDGEQ 85 (95)
T ss_dssp CEEEECSCCTTCEEEEEEEEEETTSCE
T ss_pred cEEEECCCCCCCEEEEEEEEEcCCCcc
Confidence 467899999999999988643323444
No 174
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=83.43 E-value=3.5 Score=41.03 Aligned_cols=22 Identities=23% Similarity=0.356 Sum_probs=18.5
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPS 186 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~ 186 (558)
....|+||+|++.|.|+|...+
T Consensus 329 ~~~~~~~L~p~t~Y~~~V~A~~ 350 (368)
T 1fnf_A 329 STATISGLKPGVDYTITVYAVT 350 (368)
T ss_dssp CEEEECSCCTTCCEEEEEEEEC
T ss_pred eEEEecCCCCCCEEEEEEEEeC
Confidence 4668899999999999997554
No 175
>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens}
Probab=83.21 E-value=1.3 Score=47.27 Aligned_cols=96 Identities=17% Similarity=0.143 Sum_probs=56.5
Q ss_pred CCCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccC
Q 008663 83 GFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSG 162 (558)
Q Consensus 83 ~~~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~ 162 (558)
+..|..+.+.. ..++++.|+|.......+ ....=.|+|....+..... .++ ..+. ..
T Consensus 382 P~PP~nl~v~~-~~stsl~LsW~~P~~~~~--------~~L~YeVrYr~~~~~~~~~------~vs----v~~~----~~ 438 (483)
T 3e0g_A 382 PHTPTSFKVKD-INSTAVKLSWHLPGNFAK--------INFLCEIEIKKSNSVQEQR------NVT----IQGV----EN 438 (483)
T ss_dssp CCCCEEEEECC-SSSSSCCEEEECCSCCTT--------SBCCCEEEEECSSSCCCEE------ECC----CBCC----SS
T ss_pred CCCCeeeEEEE-ecCCeEEEEECCCCCCCC--------ceEEEEEEEEECCCCCceE------EEE----Eecc----CC
Confidence 44677777653 246889999987532111 0123468887765432110 000 0110 01
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCCC-----CCccceeEEEcCCC
Q 008663 163 IIHHVRLTGLKPDTLYHYQCGDPSI-----PAMSGTYCFRTMPD 201 (558)
Q Consensus 163 ~~h~v~l~gL~P~T~Y~Yrvg~~~~-----~~~S~~~~F~T~P~ 201 (558)
-.+.+.|.+|+|+|+|..||..... ..||+...|+|+.+
T Consensus 439 ~~~s~~l~~L~PgT~Y~vrVRA~~~g~g~WSeWS~~~~f~T~E~ 482 (483)
T 3e0g_A 439 SSYLVALDKLNPYTLYTFRIRCSTETFWKWSKWSNKKQHLTTEA 482 (483)
T ss_dssp SBCCCCCCSCCSSSSCEEEEECCCSSCCCCCCCCCCCCCCCCCC
T ss_pred ceeEEEEeccCCCcEEEEEEEEeeCCCCCcCCCCCceeeECCCC
Confidence 2345678999999999999975421 26788888998654
No 176
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=83.00 E-value=1.4 Score=41.27 Aligned_cols=38 Identities=13% Similarity=0.195 Sum_probs=27.6
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC---Cccc-eeEEEcCCCC
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPSIP---AMSG-TYCFRTMPDS 202 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~-~~~F~T~P~~ 202 (558)
..+.|++|+|+|.|.+||...+.. .+|. ...|+|.+..
T Consensus 160 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~T~~~~ 201 (234)
T 3f7q_A 160 RMLLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQPKR 201 (234)
T ss_dssp CEEEEECCCTTCCEEEEEEEEETTEECCCEEEEECGGGSCCC
T ss_pred eEEEeCCCCCCCeEEEEEEEECCCccCCCcCceeEeecCCCC
Confidence 467899999999999999654432 3454 4678887654
No 177
>1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A
Probab=82.90 E-value=2.6 Score=39.95 Aligned_cols=35 Identities=17% Similarity=0.133 Sum_probs=26.3
Q ss_pred EEEEeCCCCCCCEEEEEEecCC-----CCCccceeEEEcC
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPS-----IPAMSGTYCFRTM 199 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~-----~~~~S~~~~F~T~ 199 (558)
..+.|.+|+|||+|..||.... -..||+...|+|+
T Consensus 195 ~~~~l~~L~p~t~Y~vqVRa~~~~gg~ws~WS~~~~~~~p 234 (236)
T 1axi_B 195 TSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 234 (236)
T ss_dssp SEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred CEEEEeccCCCCEEEEEEEEEECCCCCcCCCCCCEEEECC
Confidence 4678899999999999996432 2367777888774
No 178
>3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A*
Probab=82.78 E-value=2.1 Score=44.78 Aligned_cols=74 Identities=19% Similarity=0.250 Sum_probs=43.4
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccCcE
Q 008663 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (558)
Q Consensus 85 ~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~~ 164 (558)
.|..|++.-.. ++|+.|+|.... -|. + ..=.|+|......... .+... .+-.
T Consensus 372 ~~~~l~~~~~~-~~s~~l~W~~p~--~~~-~-------~~y~v~y~~~~~~~~~-------~~~~~----------~~~~ 423 (461)
T 3csg_A 372 VPTNLEVVAAT-PTSLLISWDASY--SSS-V-------SYYRITYGETGGNSPV-------QEFTV----------PGSK 423 (461)
T ss_dssp SSCCCEEEEEC-SSCEEEECCCTT--GGG-C-------SEEEEEEEETTCCSCC-------EEEEE----------ETTC
T ss_pred CCcceEEeccC-CCeEEEEecCCC--CCc-c-------eEEEEEEEECCCCccc-------eEEEe----------cCCC
Confidence 57778776554 789999997541 111 1 1234666654321100 01100 1123
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPS 186 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~ 186 (558)
.+|+|+||+|||+|-.||..-.
T Consensus 424 ~~~~i~~L~p~t~Y~~~v~a~~ 445 (461)
T 3csg_A 424 STATISGLSPGVDYTITVYAYS 445 (461)
T ss_dssp CEEEECSCCTTCEEEEEEEEEC
T ss_pred ceEEecCCCCCCEEEEEEEEEe
Confidence 5789999999999999997543
No 179
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=81.96 E-value=6 Score=39.46 Aligned_cols=35 Identities=23% Similarity=0.077 Sum_probs=24.9
Q ss_pred EEEeCCCCCCCEEEEEEecCCCCCccc--eeEEEcCC
Q 008663 166 HVRLTGLKPDTLYHYQCGDPSIPAMSG--TYCFRTMP 200 (558)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~P 200 (558)
...|+||+|+|+|.+||...+..+.|+ .+.++|+-
T Consensus 332 ~~~i~~L~p~t~Y~~~V~A~~~~G~s~p~s~~~~~~~ 368 (375)
T 3t1w_A 332 SITLTNLTPGTEYVVSIVALNGREESPLLIGQQSTVS 368 (375)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCC
T ss_pred EEEECCCCCCCEEEEEEEEECCCCCCCceeeeeEEee
Confidence 568899999999999997655444443 45566643
No 180
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=81.86 E-value=6 Score=43.73 Aligned_cols=34 Identities=21% Similarity=0.473 Sum_probs=23.5
Q ss_pred EEEeCCCCCCCEEEEEEecCCCC----CccceeEEEcC
Q 008663 166 HVRLTGLKPDTLYHYQCGDPSIP----AMSGTYCFRTM 199 (558)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~~----~~S~~~~F~T~ 199 (558)
+++|++|+|+|.|.|||...+.. ..+....|+|.
T Consensus 224 ~~~i~~L~P~t~Y~frV~A~n~~G~~~~ss~s~~~~t~ 261 (680)
T 1zlg_A 224 RVQLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSS 261 (680)
T ss_pred eEEeCCCCCCCEEEEEEEEEeCCCCCCCCCCccceEcC
Confidence 46789999999999999654322 23344556663
No 181
>2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C*
Probab=81.77 E-value=4.9 Score=36.74 Aligned_cols=87 Identities=13% Similarity=0.215 Sum_probs=51.9
Q ss_pred CCCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccC
Q 008663 83 GFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSG 162 (558)
Q Consensus 83 ~~~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~ 162 (558)
...|..++++... ...+.|+|...... ..-.-.|+|....+..+..+.. .
T Consensus 99 P~pP~~l~~~~~~-~~~l~l~W~~p~~~----------~~l~yev~y~~~~~~~w~~~~~-------------------~ 148 (199)
T 2b5i_C 99 PWAPENLTLHKLS-ESQLELNWNNRFLN----------HCLEHLVQYRTDWDHSWTEQSV-------------------D 148 (199)
T ss_dssp CCCCEEEEEEEEE-TTEEEEEEECSSCS----------TTCEEEEEEEETTCSSCEEEEE-------------------C
T ss_pred cCCCcEEEEEECC-CCCEEEEECCCCCC----------CceEEEEEEeecCCcccEEEec-------------------c
Confidence 4568888777654 36899999975310 1123458888765544433210 0
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCC------CC---CccceeEEEcC
Q 008663 163 IIHHVRLTGLKPDTLYHYQCGDPS------IP---AMSGTYCFRTM 199 (558)
Q Consensus 163 ~~h~v~l~gL~P~T~Y~Yrvg~~~------~~---~~S~~~~F~T~ 199 (558)
......|.+|+|++.|..||.... .+ .||+...|.|.
T Consensus 149 ~~~~~~l~~l~p~~~Y~vqVR~~~~~~~~~~g~WSeWS~~~~~~t~ 194 (199)
T 2b5i_C 149 YRHKFSLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSN 194 (199)
T ss_dssp SSCEEEECSCCTTSCEEEEEEEECCSSSCCCCCCCCCCCCEEC---
T ss_pred CceEEEecCCCCCcEEEEEEEEeccCCcCcCCeECCCCCCEEecCC
Confidence 123557899999999999996433 12 56666666663
No 182
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=81.43 E-value=1.2 Score=40.89 Aligned_cols=39 Identities=28% Similarity=0.375 Sum_probs=28.8
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCCC
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDSS 203 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~~ 203 (558)
....|.+|+|++.|.|||...+. ..+|....|+|.|..+
T Consensus 173 ~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p~~g 214 (215)
T 3mtr_A 173 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVQG 214 (215)
T ss_dssp TEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC---
T ss_pred ccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEeccccC
Confidence 35678999999999999965432 3567888999988654
No 183
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=80.34 E-value=6.6 Score=35.59 Aligned_cols=23 Identities=22% Similarity=0.313 Sum_probs=19.3
Q ss_pred cEEEEEeCCCCCCCEEEEEEecC
Q 008663 163 IIHHVRLTGLKPDTLYHYQCGDP 185 (558)
Q Consensus 163 ~~h~v~l~gL~P~T~Y~Yrvg~~ 185 (558)
-...+.+++|+|+|.|.|||...
T Consensus 68 ~~~~~~i~~L~p~t~Y~~~V~A~ 90 (214)
T 2ibg_A 68 KSFTASVTDLKPQHTYRFRILAV 90 (214)
T ss_dssp EEEEEEECSCCTTCEEEEEEEEE
T ss_pred cceeEEecCCcCCCEEEEEEEEE
Confidence 34567899999999999999754
No 184
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=80.25 E-value=17 Score=34.42 Aligned_cols=37 Identities=5% Similarity=-0.159 Sum_probs=24.0
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCC--ccceeEEEcCC
Q 008663 164 IHHVRLTGLKPDTLYHYQCGDPSIPA--MSGTYCFRTMP 200 (558)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~--~S~~~~F~T~P 200 (558)
...+.+++|+|+|.|.+||...+..+ .+.....+|..
T Consensus 156 ~~~~~~~~L~p~t~Y~~~V~A~n~~g~g~~~~~~~~t~~ 194 (290)
T 3l5i_A 156 HRTYLRGNLAESKCYLITVTPVYADGPGSPESIKAYLKQ 194 (290)
T ss_dssp SEEECCSCCCTTCEEEEEEEEEETTEECCCEEEEEESSC
T ss_pred cceEEecCcCCccEEEEEEEEEeCCcccccEEEEeEccc
Confidence 34567899999999999997544322 23334444543
No 185
>2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1
Probab=79.87 E-value=6.7 Score=37.50 Aligned_cols=89 Identities=12% Similarity=0.212 Sum_probs=52.2
Q ss_pred CCCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccC
Q 008663 83 GFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSG 162 (558)
Q Consensus 83 ~~~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~ 162 (558)
...|..|.++... ...+.|+|....+. ..-.-.|+|....+..+..+.. .
T Consensus 137 P~PP~nl~v~~~~-~~~l~l~W~~P~~~----------~~L~Yevry~~~~~~~W~~~~~-------------------~ 186 (247)
T 2erj_C 137 PWAPENLTLHKLS-ESQLELNWNNRFLN----------HCLEHLVQYRTDWDHSWTEQSV-------------------D 186 (247)
T ss_dssp CCCCEEEEEEESS-SSCEEEEEECSSCC----------TTEEEEEEEECSSCSSCEEEEE-------------------C
T ss_pred eCCCCeEEEEECC-CCcEEEEECCCCCC----------CcEEEEEEEeeCCCCCCEEEec-------------------C
Confidence 4557777766543 36899999874310 0112357887755544433210 0
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCC------CC---CccceeEEEcCCC
Q 008663 163 IIHHVRLTGLKPDTLYHYQCGDPS------IP---AMSGTYCFRTMPD 201 (558)
Q Consensus 163 ~~h~v~l~gL~P~T~Y~Yrvg~~~------~~---~~S~~~~F~T~P~ 201 (558)
......|.+|+|+++|..||.... .+ .||+...|.|.+.
T Consensus 187 ~~~~~~l~~L~p~~~Y~vqVR~k~~~~~~~~g~WSeWS~~~~~~t~~~ 234 (247)
T 2erj_C 187 YRHKFSLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSNTS 234 (247)
T ss_dssp SSCEEEESCCCTTSCEEEEEEEEECSSSCCCCCCCCCCCCEEECC---
T ss_pred CceEEEecCCCCCCEEEEEEEEEeCCCCCCCCccCCCCcCEEEECCCC
Confidence 113557899999999999996432 12 6777788888654
No 186
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=79.09 E-value=15 Score=40.37 Aligned_cols=39 Identities=18% Similarity=0.240 Sum_probs=28.1
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCccce---eEEEcCCCC
Q 008663 164 IHHVRLTGLKPDTLYHYQCGDPSI---PAMSGT---YCFRTMPDS 202 (558)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~---~~F~T~P~~ 202 (558)
...++|+||+|+|.|.+||...+. +.+|.. ..++|.+..
T Consensus 333 ~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~v~~~T~~~~ 377 (680)
T 1zlg_A 333 QNSVILEKLQPDCDYVVELQAITYWGQTRLKSAKVSLHFTSTHAT 377 (680)
T ss_pred eeEEEeCCCCCCCEEEEEEEEEECCCcCCCCCCceeEEEECCCCC
Confidence 457889999999999999965432 234544 778886543
No 187
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=78.61 E-value=7.4 Score=41.90 Aligned_cols=39 Identities=13% Similarity=0.089 Sum_probs=28.7
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCC------CccceeEEEcCCCC
Q 008663 164 IHHVRLTGLKPDTLYHYQCGDPSIP------AMSGTYCFRTMPDS 202 (558)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~~------~~S~~~~F~T~P~~ 202 (558)
..+++|++|+|+|.|.+||...+.. ..+....++|.|.+
T Consensus 399 ~ts~tI~gL~P~T~Y~frV~A~N~~G~~sps~~s~~v~v~T~~~~ 443 (536)
T 3fl7_A 399 RTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQTE 443 (536)
T ss_dssp SSEEEEECCCTTCEEEEEEEEECTTGGGCSCCCEEEEEEECCSCC
T ss_pred cceeEeCCCCCCCEEEEEEEEEecCCCCCCCCccceeEEeecccC
Confidence 4567899999999999999654422 24567788887654
No 188
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=78.45 E-value=8.2 Score=42.76 Aligned_cols=98 Identities=16% Similarity=0.055 Sum_probs=53.9
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccCc
Q 008663 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (558)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~ 163 (558)
..|..+.+.-. .++++.|+|.-.....+.. . ...-.|+|....+......... ... ....
T Consensus 361 ~~P~~~~~~~~-~~~sv~l~W~~p~~~~~~~-~-----~~~y~v~y~~~~~~~~~~~~~~----~~~---------~~~~ 420 (731)
T 2v5y_A 361 RGPRKLEVVEV-KSRQITIRWEPFGYNVTRC-H-----SYNLTVHYCYQVGGQEQVREEV----SWD---------TENS 420 (731)
T ss_dssp CCCEEEEEEEE-CSSCEEEEEECCCHHHHCS-S-----SCEEEEEEEEESSSSEEEEEEE----ECC---------SSCS
T ss_pred CCCceeEEEec-cCCeEEEEEECCCcccccc-e-----eeeEEEEEEEccCCCCccceeE----EEE---------ecCC
Confidence 45777765533 3689999998643211100 0 0123467766543221111000 000 0122
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCC--CccceeEEEcCCC
Q 008663 164 IHHVRLTGLKPDTLYHYQCGDPSIP--AMSGTYCFRTMPD 201 (558)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~~--~~S~~~~F~T~P~ 201 (558)
...+.|++|+|+|.|.+||...+.. ..|....++|...
T Consensus 421 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~S~~~~~~T~~~ 460 (731)
T 2v5y_A 421 HPQHTITNLSPYTNVSVKLILMNPEGRKESQELIVQTDED 460 (731)
T ss_dssp SCEEEECSCCSSCEEEEEEEEECSSCEEECCCEEEECCCC
T ss_pred cceEEECCCCCCCEEEEEEEEEcCCCCCCCceEEEEccCC
Confidence 3456899999999999999754422 3477788888654
No 189
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=77.62 E-value=1.8 Score=46.49 Aligned_cols=97 Identities=15% Similarity=0.103 Sum_probs=54.3
Q ss_pred CCCCCeEEEEe-cCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCcccccc
Q 008663 83 GFEPEQISVSL-SSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTS 161 (558)
Q Consensus 83 ~~~P~qi~lt~-~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~ 161 (558)
...|..+.+.. ...++++.|+|.......|. ...=.|+|....+..+..+. .. . ..
T Consensus 199 p~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~~--------~~~Y~v~~~~~~~~~w~~~~-----------~~---~-~~ 255 (589)
T 3l5h_A 199 PNPPHNLSVINSEELSSILKLTWTNPSIKSVI--------ILKYNIQYRTKDASTWSQIP-----------PE---D-TA 255 (589)
T ss_dssp CCCCCSCEEECTTTCTTCEEEECCCCGGGGTS--------CEEEEEEEEETTCSCCBCCC-----------TT---S-SC
T ss_pred cCCCceEEEEecCCCCCeEEEEeCCCCCCCee--------eEEEEEEECCCCCCCcEEEc-----------cc---c-Cc
Confidence 44677777763 34568999999764321110 01124566554322221100 00 0 11
Q ss_pred CcEEEEEeCCCCCCCEEEEEEecCCC------CCccceeEEEcCCCC
Q 008663 162 GIIHHVRLTGLKPDTLYHYQCGDPSI------PAMSGTYCFRTMPDS 202 (558)
Q Consensus 162 ~~~h~v~l~gL~P~T~Y~Yrvg~~~~------~~~S~~~~F~T~P~~ 202 (558)
.....+.|++|+|+|.|.+||..... ..||+...|+|.+..
T Consensus 256 ~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~~ 302 (589)
T 3l5h_A 256 STRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDR 302 (589)
T ss_dssp SCCSEEEECSCCSSCCEEEEEEEEESSSCSCCCCCCCCBCCCCCCCC
T ss_pred CceeEEEECCCCCCCEEEEEEEEEeCCCCCccCCCCCccccccCccC
Confidence 22346689999999999999964321 245778888887643
No 190
>1iar_B Protein (interleukin-4 receptor alpha chain); cytokine receptor,interleukin-4, cytokine/receptor complex; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B* 3bpn_B* 3bpo_B*
Probab=75.97 E-value=10 Score=34.86 Aligned_cols=100 Identities=12% Similarity=0.072 Sum_probs=48.3
Q ss_pred CCCCCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccc
Q 008663 81 VEGFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYT 160 (558)
Q Consensus 81 ~~~~~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~ 160 (558)
+....|..+.+.... .....|+|...... .. .. ...-.=.|+|....+.-... ... . . .
T Consensus 96 Vkp~PP~nl~~~~~~-~~~l~l~W~~p~~~-~~-~~---~~~L~yev~y~~~~~~~~~~-~~~--~---~---------~ 154 (207)
T 1iar_B 96 VKPRAPGNLTVHTNV-SDTLLLTWSNPYPP-DN-YL---YNHLTYAVNIWSENDPADFR-IYN--V---T---------Y 154 (207)
T ss_dssp BCCCCCEEEEEC-----CCEEEEEECSSCT-TS-TT---GGGCEEEEEEEESSSCSCEE-EEE--E---C---------S
T ss_pred cccCCCCCeEEEEcc-CCCEEEEECCCCCc-cc-cc---cccEEEEEEEccCCCchhhe-eee--e---e---------c
Confidence 344568888877532 35899999875321 00 00 00123457787655432211 100 0 0 1
Q ss_pred cCcEEEEEeCCCCCCCEEEEEEecCC---CC---CccceeEEEcCCC
Q 008663 161 SGIIHHVRLTGLKPDTLYHYQCGDPS---IP---AMSGTYCFRTMPD 201 (558)
Q Consensus 161 ~~~~h~v~l~gL~P~T~Y~Yrvg~~~---~~---~~S~~~~F~T~P~ 201 (558)
.+....+.+.+|.||++|..||.... .+ .||+...|+|.++
T Consensus 155 ~~~~~~~~~~~L~p~~~Y~vqVR~k~~~~~G~WSeWS~~~~~~t~~~ 201 (207)
T 1iar_B 155 LEPSLRIAASTLKSGISYRARVRAWAQAYNTTWSEWSPSTKWHNSYR 201 (207)
T ss_dssp SCCEEEECC-----CCCEEEEEEEECGGGTCCCCCCCCCEEEC----
T ss_pred CCcEEEEEHHHCCCCCEEEEEEEEecCCCCCCCCCCCcCeEEECCCC
Confidence 12345566779999999999996442 12 6778899999765
No 191
>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}
Probab=75.25 E-value=27 Score=34.01 Aligned_cols=36 Identities=22% Similarity=0.373 Sum_probs=27.9
Q ss_pred EEEeCCCCCCCEEEEEEecCC-----CCCccceeEEEcCCC
Q 008663 166 HVRLTGLKPDTLYHYQCGDPS-----IPAMSGTYCFRTMPD 201 (558)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~-----~~~~S~~~~F~T~P~ 201 (558)
.++|++|+|+|.|..+|..-. .+.+|+...++|...
T Consensus 160 ~~~l~~L~p~t~Y~~~V~A~~~~~~g~g~~S~~~~~~T~~~ 200 (306)
T 3s98_A 160 RHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVE 200 (306)
T ss_dssp EEEECSCCTTCEEEEEEEEEEGGGTEECCCCCCEEEECCSC
T ss_pred eEEEccCCCCCeEEEEEEEEEccCCCCCCCCCcEeeEecCC
Confidence 568999999999999996432 246788888888643
No 192
>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=74.65 E-value=2.5 Score=39.89 Aligned_cols=36 Identities=19% Similarity=0.343 Sum_probs=25.4
Q ss_pred EEEeCCCCCCCEEEEEEecCCCC---CccceeEEEcCCC
Q 008663 166 HVRLTGLKPDTLYHYQCGDPSIP---AMSGTYCFRTMPD 201 (558)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~P~ 201 (558)
..++++|+|+|+|.|||...+.. .+|....++|.+.
T Consensus 47 ~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~~~~~~t~~~ 85 (232)
T 4go6_B 47 QLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCLP 85 (232)
T ss_dssp --CEEECCTTCEEEEEEEEEETTEEEEECCCEEEECCCT
T ss_pred EEEeCCCCCCCEEEEEEEEEeCCCccccccceeeeecCC
Confidence 35678999999999999765432 4566777777543
No 193
>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*
Probab=74.35 E-value=7.3 Score=38.11 Aligned_cols=103 Identities=13% Similarity=0.115 Sum_probs=52.0
Q ss_pred CCCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccC
Q 008663 83 GFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSG 162 (558)
Q Consensus 83 ~~~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~ 162 (558)
...|..+++... .+++.|+|.......+. ...=.|+|....+..+....-....... ....+ ...
T Consensus 200 P~pP~~l~~~~~--~~~l~lsW~~P~~~~~~--------~l~Yev~y~~~~~~~w~~~~~~~~~c~~-~~~~~----~~~ 264 (314)
T 3bpo_C 200 PDPPHIKNLSFH--NDDLYVQWENPQNFISR--------CLFYEVEVNNSQTETHNVFYVQEAKCEN-PEFER----NVE 264 (314)
T ss_dssp CCCCEEEEEEEE--TTEEEEEEECCTTCCGG--------GEEEEEEEEC--CCCEEEEEESCCCCCC-TTSSC----CCS
T ss_pred eCCCCEEEEEEc--CCcEEEEEeCCCccCCc--------eEEEEEEEEECCCCcceEEecccccccc-ccccc----ccC
Confidence 345787877633 47999999874321000 0123467766543322111000000000 00000 012
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCC-------C---CCccceeEEEcCC
Q 008663 163 IIHHVRLTGLKPDTLYHYQCGDPS-------I---PAMSGTYCFRTMP 200 (558)
Q Consensus 163 ~~h~v~l~gL~P~T~Y~Yrvg~~~-------~---~~~S~~~~F~T~P 200 (558)
....+.|.+|+|+|+|.+||.... . ..||+...|.+.+
T Consensus 265 ~~~~~~l~~L~p~t~Y~~qVra~~~~~~~~~~g~WS~WS~~~~~~~~~ 312 (314)
T 3bpo_C 265 NTSCFMVPGVLPDTLNTVRIRVKTNKLCYEDDKLWSNWSQEMSIGKKR 312 (314)
T ss_dssp SEEEEEEESCCTTSCEEEEEEEEECTTTSCCCCCCCCCCCCEEESCCC
T ss_pred CceEEEEccCCCCCEEEEEEEeeecccccCCCCeeCCCCCCeEecccC
Confidence 356778999999999999996432 1 2566677776543
No 194
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=73.10 E-value=31 Score=33.97 Aligned_cols=37 Identities=27% Similarity=0.342 Sum_probs=28.2
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCC
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPD 201 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~ 201 (558)
....|.+|+|++.|.|+|...+. ..+|....|+|.+.
T Consensus 252 ~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t~~~ 291 (389)
T 2jll_A 252 TMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPV 291 (389)
T ss_dssp SEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEECCCC
T ss_pred ceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEEecCC
Confidence 45678999999999999965432 24567788888765
No 195
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A
Probab=71.58 E-value=28 Score=35.51 Aligned_cols=113 Identities=16% Similarity=0.169 Sum_probs=58.4
Q ss_pred CCCCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCcccccc
Q 008663 82 EGFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTS 161 (558)
Q Consensus 82 ~~~~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~ 161 (558)
....|..|.++..+ +.+.|+|........ ...+.-....=.|+|.... ..+..+... . ..
T Consensus 108 ~p~pP~~l~v~~~~--~~~~l~W~~p~~~~~--~~~~~~~~l~Y~v~yr~~~-~~w~~~~~~----~-----------~~ 167 (419)
T 2gys_A 108 QPPEPRDLQISTDQ--DHFLLTWSVALGSPQ--SHWLSPGDLEFEVVYKRLQ-DSWEDAAIL----L-----------SN 167 (419)
T ss_dssp CCCCCEEEEEEEET--TEEEEEEECCC-------CCSCGGGEEEEEEEEETT-SCSTTCEEE----E-----------ES
T ss_pred cCCCCCceEEEecC--CeEEEEECCCccccc--cchhccCceEEEEEEccCC-CChhheeee----c-----------cc
Confidence 44568899887765 599999987543100 0000000011246665543 211111100 0 00
Q ss_pred CcEEEEEeCCCCCCCEEEEEEecCC------CC---CccceeEEEcCCCCCCCCCCeEEEEEec
Q 008663 162 GIIHHVRLTGLKPDTLYHYQCGDPS------IP---AMSGTYCFRTMPDSSSTSYPSRIAIVGD 216 (558)
Q Consensus 162 ~~~h~v~l~gL~P~T~Y~Yrvg~~~------~~---~~S~~~~F~T~P~~~~~~~~~rfavigD 216 (558)
...+.+.+.+|.|+++|..||.... .+ .||+...|+|.+.... .+..+-.+.+
T Consensus 168 ~~~~~~~~~~L~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~~~~--~p~~l~c~~~ 229 (419)
T 2gys_A 168 TSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGDEA--QPQNLECFFD 229 (419)
T ss_dssp SSEEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCCCTT--SCEEEEEEEC
T ss_pred ceEEEechhhcCCCCeEEEEEEEecCCCCCCCcccCCCCCceeeeccccccC--CCceEEEEEC
Confidence 1223333449999999999986432 12 4678899999876522 3445544433
No 196
>3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=71.00 E-value=6.8 Score=41.23 Aligned_cols=92 Identities=7% Similarity=0.157 Sum_probs=52.1
Q ss_pred CCeEEEEEecCCCCCCh------HHHHHHHHhC-CCCEEEEcCCcccccccc-cCCCCCccccccCCC-CCCccchhHHH
Q 008663 207 YPSRIAIVGDVGLTYNT------TSTVSHMISN-RPDLILLVGDVTYANLYL-TNGTGSDCYACSFAN-SPIHETYQPRW 277 (558)
Q Consensus 207 ~~~rfavigD~g~~~~~------~~~l~~l~~~-~pDfvl~~GDl~Y~d~~~-~~G~~~~~~~~~~~~-~~~~e~Y~~~w 277 (558)
.++++++.+.-..+.+. .+.++.+.+. +||.+|++|.+++..... ..|.. -.+++ .+..++|+..+
T Consensus 146 ~~l~ivvAsGPyT~sdnl~yepL~~Ll~~v~~~~kPdvLIL~GPFvD~~hp~i~~G~~-----p~~~~~~~~~~t~~~lF 220 (460)
T 3flo_A 146 SSLKVIVTCGPYFANDNFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKL-----PNFPQFKTQPKTLDELF 220 (460)
T ss_dssp SCEEEEEEESCCSCSSCCCCHHHHHHHHHCCCCCCCSEEEEESCSSBTTCHHHHHTCC-----CCCTTCSSCCSSHHHHH
T ss_pred CCcEEEEEeCCccCCCccChHHHHHHHHHHHhccCCCEEEEecCcccccCcccccCcc-----cccccccccccCHHHHH
Confidence 47899998886654321 2344555554 799999999999764110 11210 01111 11133444333
Q ss_pred HHH-HHhhhhhhccCCceeecCCCccc
Q 008663 278 DYW-GRYMQPVLSKVPIMVVEGNHEYE 303 (558)
Q Consensus 278 d~~-~~~l~~l~~~~P~~~v~GNHD~~ 303 (558)
... ...++.+...+-++.+||+||..
T Consensus 221 ~~~i~~il~~l~~~t~VVlVPS~rD~~ 247 (460)
T 3flo_A 221 LKLFTPILKTISPHIQTVLIPSTKDAI 247 (460)
T ss_dssp HHHTHHHHTTSCTTSEEEEECCTTBTT
T ss_pred HHHHHHHHHhccCCCEEEEeCCccccc
Confidence 332 22344454667799999999985
No 197
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=67.45 E-value=43 Score=33.95 Aligned_cols=35 Identities=23% Similarity=0.358 Sum_probs=26.6
Q ss_pred EEEeCCCCCCCEEEEEEecCC-----CCCccceeEEEcCC
Q 008663 166 HVRLTGLKPDTLYHYQCGDPS-----IPAMSGTYCFRTMP 200 (558)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~-----~~~~S~~~~F~T~P 200 (558)
.++|++|+|+|.|..||..-. .+.+|+...++|..
T Consensus 164 ~~~i~~L~p~t~Y~~~V~A~n~~~~g~g~~S~~~~~~t~~ 203 (414)
T 3se4_A 164 RHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTV 203 (414)
T ss_dssp EEEECCCCTTCEEEEEEEEECTTTCCEEEECCCEEEECCS
T ss_pred EEEEcCCCCCCeEEEEEEEEeccCCCCCccCccccccccc
Confidence 467999999999999997543 12567777788864
No 198
>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=61.48 E-value=9 Score=35.85 Aligned_cols=37 Identities=32% Similarity=0.401 Sum_probs=29.2
Q ss_pred EEEeCCCCCCCEEEEEEecC-----CCCCccceeEEEcCCCC
Q 008663 166 HVRLTGLKPDTLYHYQCGDP-----SIPAMSGTYCFRTMPDS 202 (558)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~-----~~~~~S~~~~F~T~P~~ 202 (558)
.++|.+|+|+|.|..+|... ..+.+|+...|+|.+..
T Consensus 174 ~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~d~ 215 (221)
T 4doh_R 174 TLVLTWLEPNTLYCVHVESFVPGPPRRAQPSEKQCARTLKDQ 215 (221)
T ss_dssp EEEECSCCTTCEEEEEEEEECSSSCCCCCCCEEEEEECCCC-
T ss_pred EEEEecCCCCCcEEEEEEEEEcCCCCCCCCCCCEeEecCCCc
Confidence 67899999999999999642 23478899999997653
No 199
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=58.55 E-value=7.6 Score=34.94 Aligned_cols=27 Identities=19% Similarity=0.132 Sum_probs=20.8
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCcc
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPSIPAMS 191 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S 191 (558)
..+.|+||+|+|.|.++|...+..+.+
T Consensus 165 ~~~~i~~L~p~t~Y~~~V~A~~~~G~~ 191 (201)
T 2ha1_A 165 TSVNIPDLLPGRKYIVNVYQISEDGEQ 191 (201)
T ss_dssp CEEEECSCCTTCEEEEEEEEEETTSCE
T ss_pred eEEEeCCCCCCCEEEEEEEEEcCCCCc
Confidence 467899999999999999765433444
No 200
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=56.37 E-value=30 Score=32.79 Aligned_cols=21 Identities=14% Similarity=0.194 Sum_probs=17.9
Q ss_pred EEEeCCCCCCCEEEEEEecCC
Q 008663 166 HVRLTGLKPDTLYHYQCGDPS 186 (558)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~ 186 (558)
...|.+|+|++.|.|||...+
T Consensus 255 ~~~i~~l~~~~~y~~~~~A~N 275 (305)
T 2nzi_A 255 RYTVINLFGKTSYQFRVIAEN 275 (305)
T ss_dssp EEEECSCCSSCEEEEEEEEEE
T ss_pred eEEecCCCCCCeEEEEEEEEe
Confidence 467899999999999997654
No 201
>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens}
Probab=56.15 E-value=9.9 Score=34.78 Aligned_cols=36 Identities=28% Similarity=0.225 Sum_probs=28.6
Q ss_pred EEEeCCCCCCCEEEEEEecC-----CCCCccceeEEEcCCC
Q 008663 166 HVRLTGLKPDTLYHYQCGDP-----SIPAMSGTYCFRTMPD 201 (558)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~-----~~~~~S~~~~F~T~P~ 201 (558)
.++|.+|+|+|+|..+|..- ..+.+|+...|+|.+.
T Consensus 156 ~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~~ 196 (201)
T 3lqm_A 156 FEVLRNLEPWTTYCVQVRGFLPDRNKAGEWSEPVCEQTTHD 196 (201)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTTTEECCCCCCEEEECCCG
T ss_pred eEEEecCCCCCcEEEEEEEEeccCCCCCCcCCCEeEEeCCC
Confidence 47899999999999998642 2247888889998764
No 202
>1q38_A Fibronectin; amyloid fibril, anastellin, extracellular matrix, dynamic fluctuations, conformational exchange, chaps, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=54.93 E-value=7.9 Score=30.33 Aligned_cols=34 Identities=24% Similarity=0.270 Sum_probs=22.8
Q ss_pred EEEeCCCCCCCEEEEEEecCCCCCcc--ceeEEEcC
Q 008663 166 HVRLTGLKPDTLYHYQCGDPSIPAMS--GTYCFRTM 199 (558)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~~~~S--~~~~F~T~ 199 (558)
.-+|.||+||++|.=|+-+--..+.+ ..+.|+|.
T Consensus 39 SYtIsGLkPGvtYegQLisV~r~g~~EvtrfdfTT~ 74 (89)
T 1q38_A 39 SYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTTT 74 (89)
T ss_dssp CCCCCCCCTTCCEEEEEEEECTTSCCCEEEEEECSS
T ss_pred eEEEeccCCCcEEEEEEEeeeecccCCceEEEEEec
Confidence 33689999999999887643323344 44666664
No 203
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=52.41 E-value=6.6 Score=45.03 Aligned_cols=39 Identities=23% Similarity=0.127 Sum_probs=29.9
Q ss_pred EEEEeCCCCCCCEEEEEEec-CC---C----CCccceeEEEcCCCCC
Q 008663 165 HHVRLTGLKPDTLYHYQCGD-PS---I----PAMSGTYCFRTMPDSS 203 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~-~~---~----~~~S~~~~F~T~P~~~ 203 (558)
..+.|++|+|+|+|.|||.. -+ . ..+|+...|+|.+...
T Consensus 549 ~~~~l~~L~P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v~~~T~~~~P 595 (897)
T 2dtg_E 549 PGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDATNP 595 (897)
T ss_dssp CEEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCCCCCC
T ss_pred cceEeCCCCCCcEEEEEEEEEEeccCCccccCCccceEEEECCCCCC
Confidence 45789999999999999986 22 1 2578888899976543
No 204
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=46.93 E-value=26 Score=31.48 Aligned_cols=34 Identities=6% Similarity=-0.191 Sum_probs=23.5
Q ss_pred EEEEeCCC-CCCCEEEEEEecCCCCCc--cceeEEEc
Q 008663 165 HHVRLTGL-KPDTLYHYQCGDPSIPAM--SGTYCFRT 198 (558)
Q Consensus 165 h~v~l~gL-~P~T~Y~Yrvg~~~~~~~--S~~~~F~T 198 (558)
..+.|++| +|+|.|.+||...+..+. |....|.+
T Consensus 62 ~~~~i~~L~~~~t~Y~~~V~A~n~~G~~~s~~~~~~~ 98 (215)
T 1bqu_A 62 TSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDP 98 (215)
T ss_dssp TEEECSSCCCTTSCEEEEEEEEETTEEEECCCEEECG
T ss_pred ceEEEcCCccccccEEEEEEEEecccCccCCcEEecc
Confidence 46789999 999999999976543222 33455544
No 205
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=45.91 E-value=23 Score=35.27 Aligned_cols=17 Identities=18% Similarity=0.122 Sum_probs=14.3
Q ss_pred CCCCCCCEEEEEEecCC
Q 008663 170 TGLKPDTLYHYQCGDPS 186 (558)
Q Consensus 170 ~gL~P~T~Y~Yrvg~~~ 186 (558)
++|.+||+|||.|...+
T Consensus 76 t~~~~GttYyYwVk~~~ 92 (344)
T 3b4n_A 76 ADTNSGLNYWYWVDVVS 92 (344)
T ss_dssp CCCCTTCCCEEEEEEEE
T ss_pred cCcCCCcEEEEEEEEec
Confidence 79999999999986543
No 206
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A
Probab=44.31 E-value=8.3 Score=39.58 Aligned_cols=34 Identities=24% Similarity=0.293 Sum_probs=24.8
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC-----C---CccceeEEEc
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPSI-----P---AMSGTYCFRT 198 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~-----~---~~S~~~~F~T 198 (558)
..+.|.+|+|+|+|..||..... + .||+...|+|
T Consensus 377 ~~~~l~~L~p~t~Y~~qVRa~~~~g~~~G~wS~WS~~~~~~t 418 (419)
T 2gys_A 377 HSMALPALEPSTRYWARVRVRTSRTGYNGIWSEWSEARSWDT 418 (419)
T ss_dssp SEEECCCCCSSCCCEEEEEEEECCTTCCBCCCCCCCCEECCC
T ss_pred cEEEeccCCCCCeEEEEEEEEEcCCCCCCccCCCCCCeEeeC
Confidence 36789999999999999864321 2 5666777765
No 207
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*
Probab=41.55 E-value=7 Score=39.83 Aligned_cols=98 Identities=10% Similarity=0.068 Sum_probs=0.0
Q ss_pred cccCCCCCCCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCC
Q 008663 76 RVQRTVEGFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLG 155 (558)
Q Consensus 76 ~~~~~~~~~~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g 155 (558)
.+...+....|..+.+.... .+++.|+|.......+....-+ .|+|......-.....+....
T Consensus 231 ~~~~~v~p~pP~~l~v~~~~-~~~l~l~W~~P~~~~~~~~l~Y-------ev~y~~~~~~w~~~~~~~~~~--------- 293 (380)
T 3lb6_C 231 QLQNIVKPLPPVYLTFTRES-SCEIKLKWSIPLGPIPARCFDY-------EIEIREDDTTLVTATVENETY--------- 293 (380)
T ss_dssp CGGGSCCCCCCEEEEEC--------CEEEECCSSSCCSTTEEE-------EECC--------CCEESSSCC---------
T ss_pred cHHHcccCCCCceEEEEEcC-CCeEEEEECCCCCCCCcceEEE-------EEEEEeCCCCceEecccceEE---------
Q ss_pred ccccccCcEEEEEeCC-CCCCCEEEEEEecCCC---------CCccceeEEEcCCCCC
Q 008663 156 LQNYTSGIIHHVRLTG-LKPDTLYHYQCGDPSI---------PAMSGTYCFRTMPDSS 203 (558)
Q Consensus 156 ~~~~~~~~~h~v~l~g-L~P~T~Y~Yrvg~~~~---------~~~S~~~~F~T~P~~~ 203 (558)
|.+ |+|+|.|.+||..... ..||+...|+|.....
T Consensus 294 -------------l~~~L~p~t~Y~~qVRa~~~~~~~~~g~WSeWS~~~~~~t~~~~~ 338 (380)
T 3lb6_C 294 -------------TLKTTNETRQLCFVVRSKVNIYCSDDGIWSEWSDKQCWEGEDLSK 338 (380)
T ss_dssp -------------------------CCEEEEECTTTCSSCCCCCCCCC----------
T ss_pred -------------EeCccCCCcEEEEEEEEEEcccCCCCCCCCCCCCCEEEeCCCCCC
No 208
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=39.93 E-value=25 Score=38.37 Aligned_cols=38 Identities=24% Similarity=0.428 Sum_probs=26.3
Q ss_pred EEEEEeCCCCCCCEEEEEEec----CCCCCccceeEEEcCCC
Q 008663 164 IHHVRLTGLKPDTLYHYQCGD----PSIPAMSGTYCFRTMPD 201 (558)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~----~~~~~~S~~~~F~T~P~ 201 (558)
.|+..+++|+|+|+|.|++.. ......++.-..+|.+.
T Consensus 112 ~~~~~v~~L~p~T~Y~~~v~a~d~~G~~s~ds~~V~~~T~~~ 153 (608)
T 2uvf_A 112 MQNFTVIGLKPETSYQFTVKAQYADGSLSVASKPITAKTSAK 153 (608)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEETTSCBCCCCCCEEEECCCC
T ss_pred eeeEEecCCCCCCEEEEEEEEecCCCcccccchhcccccccC
Confidence 467889999999999999965 11113355666666553
No 209
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=38.55 E-value=26 Score=40.06 Aligned_cols=37 Identities=22% Similarity=0.292 Sum_probs=27.4
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCC------ccceeEEEcCCC
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPSIPA------MSGTYCFRTMPD 201 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~~------~S~~~~F~T~P~ 201 (558)
...+|+||+|+|.|.++|...+..+ .+....++|.|.
T Consensus 747 t~~~i~gL~p~t~Y~~~V~A~n~~G~g~~~s~s~~v~~~T~~~ 789 (897)
T 2dtg_E 747 ESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMPE 789 (897)
T ss_dssp SEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEECCCC
T ss_pred eEEEECCCCCCcEEEEEEEEEeCCCCCCCCCCCceeEEeccCc
Confidence 4678999999999999997544322 245678888863
No 210
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=38.48 E-value=5.9 Score=42.33 Aligned_cols=35 Identities=23% Similarity=0.253 Sum_probs=26.4
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC--CCccceeEEEcC
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPSI--PAMSGTYCFRTM 199 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~--~~~S~~~~F~T~ 199 (558)
..++|+||+|+|.|.++|...+. +.+|....|+|.
T Consensus 552 ~~~~~~~L~p~t~Y~~~V~A~n~~G~~~S~~~~~~T~ 588 (589)
T 3l5h_A 552 TEYTLSSLTSDTLYMVRMAAYTDEGGKDGPEFTFTTP 588 (589)
T ss_dssp CBCCBCSCCSSCCEECCEEEEETTEEEECCCCEECCC
T ss_pred cEEEecCCCCCCEEEEEEEEEeCCCCCCCCCeEEecC
Confidence 34678999999999999865432 357777888874
No 211
>2mcm_A Macromomycin; apoprotein; 1.50A {Streptomyces macromomyceticus} SCOP: b.1.7.1
Probab=36.87 E-value=28 Score=28.99 Aligned_cols=28 Identities=43% Similarity=0.659 Sum_probs=22.2
Q ss_pred ccCCccccccCcEEEEEeCCCCCCCEEEEEE
Q 008663 152 PFLGLQNYTSGIIHHVRLTGLKPDTLYHYQC 182 (558)
Q Consensus 152 ~~~g~~~~~~~~~h~v~l~gL~P~T~Y~Yrv 182 (558)
|..|+ .+|...+|..+||.|++.||--.
T Consensus 8 PatgL---~DGq~VtV~~tGl~p~~~y~v~~ 35 (112)
T 2mcm_A 8 PATGL---SNGQTVTVSATGLTPGTVYHVGQ 35 (112)
T ss_dssp SCSSB---CTTEEEEEEEESCCTTCEEEEEE
T ss_pred CCCCC---CCCCEEEEEEEccCCCCeEEEEE
Confidence 44555 45789999999999999998743
No 212
>1noa_A Neocarzinostatin; antibacterial protein; 1.50A {Streptomyces carzinostaticus} SCOP: b.1.7.1 PDB: 1nco_A 1o5p_A* 1j5h_A 1j5i_A* 2g0k_A 2g0l_A* 2cbq_A* 2cbo_A* 2cbm_A* 2cbt_A*
Probab=36.82 E-value=28 Score=29.02 Aligned_cols=28 Identities=32% Similarity=0.471 Sum_probs=22.2
Q ss_pred ccCCccccccCcEEEEEeCCCCCCCEEEEEE
Q 008663 152 PFLGLQNYTSGIIHHVRLTGLKPDTLYHYQC 182 (558)
Q Consensus 152 ~~~g~~~~~~~~~h~v~l~gL~P~T~Y~Yrv 182 (558)
|..|+ .+|...+|..+||.|++.||--.
T Consensus 9 PatgL---~DGq~VtV~~tGl~p~~~y~v~~ 36 (113)
T 1noa_A 9 PSSGL---SDGTVVKVAGAGLQAGTAYDVGQ 36 (113)
T ss_dssp SCSSC---CTTCEEEEEEESCCTTCEEEEEE
T ss_pred CCCCC---CCCCEEEEEEEccCCCCeEEEEE
Confidence 44555 45789999999999999998743
No 213
>4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=36.76 E-value=17 Score=33.48 Aligned_cols=35 Identities=23% Similarity=0.319 Sum_probs=25.7
Q ss_pred EEEeCCCCCCCEEEEEEecC-----CCCCccceeEEEcCC
Q 008663 166 HVRLTGLKPDTLYHYQCGDP-----SIPAMSGTYCFRTMP 200 (558)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~-----~~~~~S~~~~F~T~P 200 (558)
.++|.+|+|+|.|..+|..- ..+.+|...-|+|..
T Consensus 161 ~~~i~~L~p~t~Ycv~Vra~~~~~~~~g~~S~~~C~~t~~ 200 (206)
T 4doh_B 161 PVHLETMEPGAAYCVKAQTFVKAIGRYSAFSQTECVEVQG 200 (206)
T ss_dssp EEEEEECCSSSCEEEEEEEEEGGGTEECCCCCCEEECC--
T ss_pred EEEEeCCCCCCcEEEEEEEEecCCCCCCCCCCCEeEEccc
Confidence 57899999999999998632 223677788888754
No 214
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=31.04 E-value=91 Score=34.14 Aligned_cols=38 Identities=18% Similarity=0.090 Sum_probs=27.9
Q ss_pred EEEEeCCCCCCCEEEEEEecC--CC---CCccceeEEEcCCCC
Q 008663 165 HHVRLTGLKPDTLYHYQCGDP--SI---PAMSGTYCFRTMPDS 202 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~--~~---~~~S~~~~F~T~P~~ 202 (558)
...+|++|+|++.|.|||... +. ..+|....++|.+..
T Consensus 316 ~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~~t~~~~ 358 (731)
T 2v5y_A 316 TSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCAD 358 (731)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSTTCSCCBCCCEEEECCCCC
T ss_pred ceEEEeCCCCCCEEEEEEEEEecCCCccccCCCcEEeeecCCC
Confidence 456889999999999999644 22 245667788887643
No 215
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=30.04 E-value=92 Score=29.58 Aligned_cols=23 Identities=0% Similarity=-0.354 Sum_probs=19.2
Q ss_pred EEEEEeCCC-CCCCEEEEEEecCC
Q 008663 164 IHHVRLTGL-KPDTLYHYQCGDPS 186 (558)
Q Consensus 164 ~h~v~l~gL-~P~T~Y~Yrvg~~~ 186 (558)
...+.|++| .|++.|.+||...+
T Consensus 157 ~~~~~i~~L~~p~t~Y~f~V~A~N 180 (303)
T 1i1r_A 157 PTSCTVDYSTVYFVNIEVWVEAEN 180 (303)
T ss_dssp TTEEECSSCCCTTSCEEEEEEEEE
T ss_pred ceEEEECCcCcccccEEEEEEEEc
Confidence 346789999 99999999997654
No 216
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=25.82 E-value=2.2e+02 Score=25.16 Aligned_cols=96 Identities=11% Similarity=0.100 Sum_probs=48.9
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEeccCCCCceEEEeEEEEeeeecccCCccccccCc
Q 008663 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (558)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~ 163 (558)
-.|..+......+.++|.++|...... |. + ..=.|+|......-... ...... .+.. ....
T Consensus 6 ~~P~~l~c~~~~~~~~~~~~W~p~~~~-~~------~--~~Y~l~~~~~~~~~~~~--~~~~~~---~~~~-----~~~~ 66 (215)
T 1cd9_B 6 ASPSNLSCLMHLTTNSLVCQWEPGPET-HL------P--TSFILKSFRSRADCQYQ--GDTIPD---CVAK-----KRQN 66 (215)
T ss_dssp CCCEEEEEEEETTTTEEEEEEECCSCC-SS------C--CEEEEEEEECCGGGCSC--CCEEEE---EECC-----TTCC
T ss_pred CCCeeeeeecCCCcccEEEEecCCCCC-CC------c--eeEEEEEEecCCccccc--cccccc---CCCC-----CCCc
Confidence 357777655444578999999965321 10 0 12345665432110000 000000 0000 0113
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCC--CccceeEEEc
Q 008663 164 IHHVRLTGLKPDTLYHYQCGDPSIP--AMSGTYCFRT 198 (558)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~~--~~S~~~~F~T 198 (558)
..++.+.+|.|++.|.++|...+.- ..|....|.+
T Consensus 67 ~~~~~~~~L~~~~~Y~~~V~A~N~~G~~~s~~~~~~~ 103 (215)
T 1cd9_B 67 NCSIPRKNLLLYQYMAIWVQAENMLGSSESPKLCLDP 103 (215)
T ss_dssp EEEEEGGGCCTTSCEEEEEEEEETTEEEECCCEEECG
T ss_pred EEEECCcccccceEEEEEEEEECCCCCccCccEEEch
Confidence 4567889999999999999754421 2344555654
No 217
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=24.64 E-value=16 Score=37.38 Aligned_cols=37 Identities=27% Similarity=0.437 Sum_probs=0.0
Q ss_pred EEEEeCCCCCCCEEEEEEecCC-------CCCccceeEEEcCCC
Q 008663 165 HHVRLTGLKPDTLYHYQCGDPS-------IPAMSGTYCFRTMPD 201 (558)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~-------~~~~S~~~~F~T~P~ 201 (558)
..++|++|+|+|.|..+|.... .+.+|+...|+|.|.
T Consensus 367 ~~~~l~~L~p~t~Y~~~V~A~~~~~~~~g~g~~S~~~~~~T~~~ 410 (414)
T 3se4_A 367 TDVTVPNLKPLTVYCVKARAHTMDEKLNKSSVFSDAVCEKTKPG 410 (414)
T ss_dssp --------------------------------------------
T ss_pred CeEEeCCCCCCCeEEEEEEEEecccccCCCCCCCCCEeEEeCCC
Confidence 3578999999999999986432 236777778888664
Done!