Your job contains 1 sequence.
>008667
MVLHKFGEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILM
YMDRTYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR
NIIKMLMDLGPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMER
VTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVP
SGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQ
NALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDV
FEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF
YASHPELGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQ
TNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQGNRAGNRDSCFRLEKVPA
ISGLCEGEECSSERTYE
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 008667
(557 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2200670 - symbol:CUL3 "AT1G26830" species:3702... 2338 1.3e-242 1
TAIR|locus:2205020 - symbol:CUL3B "AT1G69670" species:370... 2324 4.0e-241 1
DICTYBASE|DDB_G0284903 - symbol:culC "cullin C" species:4... 1523 3.0e-156 1
UNIPROTKB|Q13618 - symbol:CUL3 "Cullin-3" species:9606 "H... 1369 6.7e-147 2
UNIPROTKB|E1BYQ3 - symbol:CUL3 "Uncharacterized protein" ... 1365 1.8e-146 2
UNIPROTKB|E1BIN5 - symbol:CUL3 "Uncharacterized protein" ... 1365 1.8e-146 2
UNIPROTKB|F1PU58 - symbol:CUL3 "Uncharacterized protein" ... 1365 1.8e-146 2
RGD|1308190 - symbol:Cul3 "cullin 3" species:10116 "Rattu... 1365 1.8e-146 2
ZFIN|ZDB-GENE-081007-1 - symbol:cul3b "cullin 3b" species... 1365 3.7e-146 2
MGI|MGI:1347360 - symbol:Cul3 "cullin 3" species:10090 "M... 1360 6.0e-146 2
UNIPROTKB|Q6DE95 - symbol:cul3a "Cullin-3-A" species:8355... 1349 3.3e-145 2
UNIPROTKB|Q6GPF3 - symbol:cul3b "Cullin-3-B" species:8355... 1351 5.4e-145 2
UNIPROTKB|A4IHP4 - symbol:cul3 "Cullin-3" species:8364 "X... 1349 8.8e-145 2
ZFIN|ZDB-GENE-030131-3376 - symbol:cul3a "cullin 3a" spec... 1343 6.1e-144 2
FB|FBgn0261268 - symbol:Cul-3 "Cullin-3" species:7227 "Dr... 1202 1.3e-130 2
WB|WBGene00000838 - symbol:cul-3 species:6239 "Caenorhabd... 1031 3.1e-108 2
UNIPROTKB|Q17391 - symbol:cul-3 "Cullin-3" species:6239 "... 1031 3.1e-108 2
UNIPROTKB|F1SR61 - symbol:LOC100511787 "Uncharacterized p... 975 2.8e-105 2
MGI|MGI:1919834 - symbol:Cul4b "cullin 4B" species:10090 ... 998 1.3e-100 1
TAIR|locus:2162060 - symbol:CUL4 "cullin4" species:3702 "... 997 1.7e-100 1
ZFIN|ZDB-GENE-041008-208 - symbol:cul4b "cullin 4B" speci... 997 1.7e-100 1
UNIPROTKB|E1BFD5 - symbol:CUL4B "Uncharacterized protein"... 993 4.4e-100 1
UNIPROTKB|K4DI93 - symbol:CUL4B "Cullin 4B, isoform CRA_e... 993 4.4e-100 1
UNIPROTKB|Q13620 - symbol:CUL4B "Cullin-4B" species:9606 ... 993 4.4e-100 1
UNIPROTKB|F1P2U1 - symbol:CUL4A "Uncharacterized protein"... 992 5.6e-100 1
ZFIN|ZDB-GENE-040426-1357 - symbol:cul4a "cullin 4A" spec... 992 5.6e-100 1
UNIPROTKB|E2RMN1 - symbol:CUL4B "Uncharacterized protein"... 990 9.1e-100 1
UNIPROTKB|E1BQK9 - symbol:CUL4B "Uncharacterized protein"... 986 2.4e-99 1
UNIPROTKB|F1Q284 - symbol:CUL4A "Uncharacterized protein"... 985 3.1e-99 1
MGI|MGI:1914487 - symbol:Cul4a "cullin 4A" species:10090 ... 981 8.2e-99 1
UNIPROTKB|F1N3S4 - symbol:CUL4A "Uncharacterized protein"... 977 2.2e-98 1
UNIPROTKB|F1RN43 - symbol:CUL4A "Uncharacterized protein"... 973 5.8e-98 1
UNIPROTKB|Q13619 - symbol:CUL4A "Cullin-4A" species:9606 ... 972 7.4e-98 1
FB|FBgn0033260 - symbol:Cul-4 "Cullin-4" species:7227 "Dr... 942 1.1e-94 1
RGD|1564494 - symbol:Cul4b "cullin 4B" species:10116 "Rat... 699 1.9e-89 2
DICTYBASE|DDB_G0292794 - symbol:culD "cullin D" species:4... 871 3.7e-87 1
ASPGD|ASPL0000014731 - symbol:culC species:162425 "Emeric... 486 1.4e-76 2
POMBASE|SPAC24H6.03 - symbol:cul3 "cullin 3" species:4896... 667 8.6e-71 2
UNIPROTKB|F1RUC1 - symbol:CUL4B "Uncharacterized protein"... 704 1.8e-69 1
ASPGD|ASPL0000060435 - symbol:culA species:162425 "Emeric... 661 4.7e-68 2
UNIPROTKB|F1MYD0 - symbol:CUL1 "Uncharacterized protein" ... 682 4.0e-67 1
UNIPROTKB|E2R1V2 - symbol:CUL1 "Uncharacterized protein" ... 682 4.0e-67 1
UNIPROTKB|Q13616 - symbol:CUL1 "Cullin-1" species:9606 "H... 682 4.0e-67 1
UNIPROTKB|Q5R4G6 - symbol:CUL1 "Cullin-1" species:9601 "P... 682 4.0e-67 1
MGI|MGI:1349658 - symbol:Cul1 "cullin 1" species:10090 "M... 682 4.0e-67 1
RGD|1308157 - symbol:Cul1 "cullin 1" species:10116 "Rattu... 682 4.0e-67 1
UNIPROTKB|E1C0W8 - symbol:CUL1 "Uncharacterized protein" ... 682 4.0e-67 1
ZFIN|ZDB-GENE-030131-2603 - symbol:cul1a "cullin 1a" spec... 680 6.5e-67 1
ZFIN|ZDB-GENE-040426-2887 - symbol:cul1b "cullin 1b" spec... 673 3.6e-66 1
UNIPROTKB|F1SAD7 - symbol:CUL1 "Uncharacterized protein" ... 662 5.2e-65 1
UNIPROTKB|E2QRU7 - symbol:CUL2 "Uncharacterized protein" ... 658 1.4e-64 1
UNIPROTKB|Q08DE9 - symbol:CUL2 "Uncharacterized protein" ... 652 6.0e-64 1
UNIPROTKB|Q13617 - symbol:CUL2 "Cullin-2" species:9606 "H... 652 6.0e-64 1
UNIPROTKB|Q5T2B5 - symbol:CUL2 "Cullin-2" species:9606 "H... 652 6.0e-64 1
UNIPROTKB|Q5T2B7 - symbol:CUL2 "Cullin-2" species:9606 "H... 652 6.0e-64 1
TAIR|locus:2018645 - symbol:AT1G43140 species:3702 "Arabi... 650 9.7e-64 1
UNIPROTKB|F1N829 - symbol:CUL2 "Uncharacterized protein" ... 649 1.2e-63 1
DICTYBASE|DDB_G0291972 - symbol:culA "cullin A" species:4... 645 3.3e-63 1
ZFIN|ZDB-GENE-030131-8032 - symbol:cul2 "cullin 2" specie... 640 1.1e-62 1
UNIPROTKB|F1P2W9 - symbol:CUL2 "Uncharacterized protein" ... 618 2.3e-62 2
MGI|MGI:1918995 - symbol:Cul2 "cullin 2" species:10090 "M... 636 3.0e-62 1
RGD|1310644 - symbol:Cul2 "cullin 2" species:10116 "Rattu... 634 4.8e-62 1
TAIR|locus:2132377 - symbol:CUL1 "cullin 1" species:3702 ... 630 1.3e-61 1
DICTYBASE|DDB_G0267384 - symbol:culB "cullin B" species:4... 625 4.3e-61 1
UNIPROTKB|G4N0J9 - symbol:MGG_07731 "Cullin-3" species:24... 347 5.5e-61 3
POMBASE|SPAC17G6.12 - symbol:cul1 "cullin 1" species:4896... 612 1.0e-59 1
FB|FBgn0015509 - symbol:lin19 "lin-19-like" species:7227 ... 600 1.9e-58 1
FB|FBgn0032956 - symbol:Cul-2 "Cullin-2" species:7227 "Dr... 551 2.9e-56 2
UNIPROTKB|G3N0Q3 - symbol:G3N0Q3 "Uncharacterized protein... 574 1.1e-55 1
WB|WBGene00000836 - symbol:cul-1 species:6239 "Caenorhabd... 568 4.8e-55 1
WB|WBGene00000839 - symbol:cul-4 species:6239 "Caenorhabd... 570 5.9e-55 1
DICTYBASE|DDB_G0278991 - symbol:culE "cullin E" species:4... 566 7.8e-55 1
WB|WBGene00000841 - symbol:cul-6 species:6239 "Caenorhabd... 557 7.0e-54 1
UNIPROTKB|F1RUR7 - symbol:CUL2 "Uncharacterized protein" ... 532 3.1e-51 1
POMBASE|SPAC3A11.08 - symbol:pcu4 "cullin 4" species:4896... 532 3.1e-51 1
UNIPROTKB|I3L5Y8 - symbol:I3L5Y8 "Uncharacterized protein... 516 1.5e-49 1
UNIPROTKB|D4A0H4 - symbol:Cul2 "Cullin 2 (Predicted), iso... 505 2.7e-48 1
WB|WBGene00000837 - symbol:cul-2 species:6239 "Caenorhabd... 457 1.9e-45 2
UNIPROTKB|Q17390 - symbol:cul-2 "Cullin-2" species:6239 "... 457 1.9e-45 2
CGD|CAL0000107 - symbol:CDC53 species:5476 "Candida albic... 460 5.1e-43 1
UNIPROTKB|Q5AJB7 - symbol:CDC53 "Putative uncharacterized... 460 5.1e-43 1
UNIPROTKB|I3L5M8 - symbol:LOC100739075 "Uncharacterized p... 443 8.4e-42 1
TAIR|locus:2024755 - symbol:CUL2 "cullin 2" species:3702 ... 445 2.1e-41 1
WB|WBGene00000840 - symbol:cul-5 species:6239 "Caenorhabd... 255 1.6e-39 2
FB|FBgn0039632 - symbol:Cul-5 "Cullin-5" species:7227 "Dr... 265 3.9e-39 2
SGD|S000002290 - symbol:CDC53 "Cullin" species:4932 "Sacc... 297 7.7e-38 2
CGD|CAL0005748 - symbol:orf19.7497 species:5476 "Candida ... 264 5.8e-35 3
ASPGD|ASPL0000052453 - symbol:culD species:162425 "Emeric... 379 1.7e-32 1
TAIR|locus:2025881 - symbol:AT1G59790 species:3702 "Arabi... 332 1.4e-29 1
SGD|S000003235 - symbol:CUL3 "Ubiquitin-protein ligase" s... 336 1.4e-27 1
UNIPROTKB|A6NE76 - symbol:CUL4B "Cullin-4B" species:9606 ... 295 1.8e-25 1
UNIPROTKB|K7GPT4 - symbol:LOC100739075 "Uncharacterized p... 286 1.7e-24 1
TAIR|locus:2025941 - symbol:AT1G59800 species:3702 "Arabi... 269 1.2e-22 1
ZFIN|ZDB-GENE-030131-5426 - symbol:cul5a "cullin 5a" spec... 279 4.0e-21 1
ZFIN|ZDB-GENE-091113-45 - symbol:cul5b "cullin 5b" specie... 276 8.9e-21 1
UNIPROTKB|H7C1L6 - symbol:CUL3 "Cullin-3" species:9606 "H... 251 1.1e-20 1
UNIPROTKB|F1P9Q4 - symbol:CUL5 "Uncharacterized protein" ... 270 3.4e-20 1
UNIPROTKB|F1N7B5 - symbol:CUL5 "Uncharacterized protein" ... 270 3.8e-20 1
UNIPROTKB|J9PAX0 - symbol:CUL5 "Uncharacterized protein" ... 270 3.8e-20 1
UNIPROTKB|F1P0F9 - symbol:CUL5 "Uncharacterized protein" ... 270 4.0e-20 1
WARNING: Descriptions of 19 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2200670 [details] [associations]
symbol:CUL3 "AT1G26830" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0009639 "response to red or far
red light" evidence=RCA;IMP] [GO:0009911 "positive regulation of
flower development" evidence=IMP] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=IPI] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IGI] [GO:0009960 "endosperm development"
evidence=IGI] [GO:0005829 "cytosol" evidence=IDA] [GO:0008284
"positive regulation of cell proliferation" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] InterPro:IPR001373
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009793 GO:GO:0009639
GO:GO:0009911 GO:GO:0006511 GO:GO:0009960 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031461 EMBL:AC005508 EMBL:AC006535
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 HSSP:Q9JLV5
EMBL:AJ319540 EMBL:AJ344252 EMBL:AK230392 IPI:IPI00528089
PIR:A86395 RefSeq:NP_174005.1 UniGene:At.27879
ProteinModelPortal:Q9ZVH4 SMR:Q9ZVH4 DIP:DIP-33568N IntAct:Q9ZVH4
STRING:Q9ZVH4 PaxDb:Q9ZVH4 PRIDE:Q9ZVH4 EnsemblPlants:AT1G26830.1
GeneID:839226 KEGG:ath:AT1G26830 TAIR:At1g26830 InParanoid:Q9ZVH4
KO:K03869 OMA:ATFYGPI PhylomeDB:Q9ZVH4 ProtClustDB:CLSN2912776
Genevestigator:Q9ZVH4 Uniprot:Q9ZVH4
Length = 732
Score = 2338 (828.1 bits), Expect = 1.3e-242, P = 1.3e-242
Identities = 441/522 (84%), Positives = 483/522 (92%)
Query: 1 MVLHKFGEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILM 60
MVLHKFGEKLY+G ++TMT HLKE SK IEAAQGGSFLEELN+KWN+HNKAL+MIRDILM
Sbjct: 59 MVLHKFGEKLYTGFIATMTSHLKEKSKLIEAAQGGSFLEELNKKWNEHNKALEMIRDILM 118
Query: 61 YMDRTYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR 120
YMDRTYI ST KT VH +GLNLWRDN+V KI TRLLNTLL+LV +ER GEVI+RGLMR
Sbjct: 119 YMDRTYIESTKKTHVHPMGLNLWRDNVVHFTKIHTRLLNTLLDLVQKERIGEVIDRGLMR 178
Query: 121 NIIKMLMDLGPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMER 180
N+IKM MDLG SVYQEDFEKPFL+ S+EFYKVESQ+FIE CDCG+YLKK+E+RL EE+ER
Sbjct: 179 NVIKMFMDLGESVYQEDFEKPFLDASSEFYKVESQEFIESCDCGDYLKKSEKRLTEEIER 238
Query: 181 VTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVP 240
V HYLDAKSE KIT+VVEKEMIANHM RLVHM+NSGLVNMLL+DKYEDLGRMYNLFRRV
Sbjct: 239 VAHYLDAKSEEKITSVVEKEMIANHMQRLVHMENSGLVNMLLNDKYEDLGRMYNLFRRVT 298
Query: 241 SGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQ 300
+GL+T+R+VMTSHLRE GKQLVTDPE+ KDPVEFVQRLLDE+DKYD II++AF NDKTFQ
Sbjct: 299 NGLVTVRDVMTSHLREMGKQLVTDPEKSKDPVEFVQRLLDERDKYDKIINTAFGNDKTFQ 358
Query: 301 NALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDV 360
NALNSSFEYFINLN RSPEFISLFVDDKLRKGLKG+++ DVE ILDKVMMLFRYLQEKDV
Sbjct: 359 NALNSSFEYFINLNARSPEFISLFVDDKLRKGLKGITDVDVEVILDKVMMLFRYLQEKDV 418
Query: 361 FEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF 420
FEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTS+DTM F
Sbjct: 419 FEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSEDTMRGF 478
Query: 421 YASHPELGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQ 480
Y SHPEL + TL+VQVLTTGSWPTQP+V CNLPAE+S LCEKFRSYYLGTHTGRRLSWQ
Sbjct: 479 YGSHPELSEGPTLIVQVLTTGSWPTQPAVPCNLPAEVSVLCEKFRSYYLGTHTGRRLSWQ 538
Query: 481 TNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
TNMG+ADIKA FGKGQKHELNVST+QMCVLMLFNN+DRLSY+
Sbjct: 539 TNMGTADIKAIFGKGQKHELNVSTFQMCVLMLFNNSDRLSYK 580
>TAIR|locus:2205020 [details] [associations]
symbol:CUL3B "AT1G69670" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=IPI] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IGI;RCA] [GO:0009960 "endosperm
development" evidence=IGI] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009880
"embryonic pattern specification" evidence=RCA] [GO:0010072
"primary shoot apical meristem specification" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0010431 "seed maturation" evidence=RCA]
[GO:0045010 "actin nucleation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] [GO:0045595 "regulation of cell
differentiation" evidence=RCA] [GO:0048765 "root hair cell
differentiation" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001373 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0009793 GO:GO:0016567 GO:GO:0006511 GO:GO:0009960
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 EMBL:AC013289
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 HSSP:Q9JLV5
KO:K03869 ProtClustDB:CLSN2912776 EMBL:AJ344541 IPI:IPI00529547
PIR:E96718 RefSeq:NP_177125.3 UniGene:At.35390
ProteinModelPortal:Q9C9L0 SMR:Q9C9L0 IntAct:Q9C9L0 STRING:Q9C9L0
PRIDE:Q9C9L0 EnsemblPlants:AT1G69670.1 GeneID:843303
KEGG:ath:AT1G69670 TAIR:At1g69670 InParanoid:Q9C9L0 OMA:REMIANH
PhylomeDB:Q9C9L0 Genevestigator:Q9C9L0 Uniprot:Q9C9L0
Length = 732
Score = 2324 (823.1 bits), Expect = 4.0e-241, P = 4.0e-241
Identities = 440/522 (84%), Positives = 485/522 (92%)
Query: 1 MVLHKFGEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILM 60
MVLHK+G+KLY+GLV+TMT HLKEI KSIE AQGG+FLE LNRKWNDHNKALQMIRDILM
Sbjct: 59 MVLHKYGDKLYTGLVTTMTFHLKEICKSIEEAQGGAFLELLNRKWNDHNKALQMIRDILM 118
Query: 61 YMDRTYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR 120
YMDRTY+ +T KT VHELGL+LWRDN+V S+KIQTRLLNTLL+LVH+ERTGEVI+R LMR
Sbjct: 119 YMDRTYVSTTKKTHVHELGLHLWRDNVVYSSKIQTRLLNTLLDLVHKERTGEVIDRVLMR 178
Query: 121 NIIKMLMDLGPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMER 180
N+IKM MDLG SVYQ+DFEKPFLE SAEFYKVES +FIE CDCGEYLKKAE+ L EE+ER
Sbjct: 179 NVIKMFMDLGESVYQDDFEKPFLEASAEFYKVESMEFIESCDCGEYLKKAEKPLVEEVER 238
Query: 181 VTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVP 240
V +YLDAKSEAKIT+VVE+EMIANH+ RLVHM+NSGLVNMLL+DKYED+GRMY+LFRRV
Sbjct: 239 VVNYLDAKSEAKITSVVEREMIANHVQRLVHMENSGLVNMLLNDKYEDMGRMYSLFRRVA 298
Query: 241 SGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQ 300
+GL+T+R+VMT HLRE GKQLVTDPE+ KDPVEFVQRLLDE+DKYD II+ AFNNDKTFQ
Sbjct: 299 NGLVTVRDVMTLHLREMGKQLVTDPEKSKDPVEFVQRLLDERDKYDRIINMAFNNDKTFQ 358
Query: 301 NALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDV 360
NALNSSFEYF+NLN RSPEFISLFVDDKLRKGLKGV EEDV+ ILDKVMMLFRYLQEKDV
Sbjct: 359 NALNSSFEYFVNLNTRSPEFISLFVDDKLRKGLKGVGEEDVDLILDKVMMLFRYLQEKDV 418
Query: 361 FEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF 420
FEKYYKQHLAKRLLSGKTVSDDAER+LIVKLKTECGYQFTSKLEGMFTDMKTS DT+ F
Sbjct: 419 FEKYYKQHLAKRLLSGKTVSDDAERNLIVKLKTECGYQFTSKLEGMFTDMKTSHDTLLGF 478
Query: 421 YASHPELGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQ 480
Y SHPEL + TLVVQVLTTGSWPTQP++ CNLPAE+S LCEKFRSYYLGTHTGRRLSWQ
Sbjct: 479 YNSHPELSEGPTLVVQVLTTGSWPTQPTIQCNLPAEVSVLCEKFRSYYLGTHTGRRLSWQ 538
Query: 481 TNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
TNMG+ADIKA FGKGQKHELNVST+QMCVLMLFNN+DRLSY+
Sbjct: 539 TNMGTADIKAVFGKGQKHELNVSTFQMCVLMLFNNSDRLSYK 580
>DICTYBASE|DDB_G0284903 [details] [associations]
symbol:culC "cullin C" species:44689 "Dictyostelium
discoideum" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
dictyBase:DDB_G0284903 GO:GO:0005634 GenomeReviews:CM000153_GR
EMBL:AAFI02000073 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 HSSP:Q9JLV5
KO:K03869 RefSeq:XP_639922.1 ProteinModelPortal:Q54NZ5 SMR:Q54NZ5
STRING:Q54NZ5 EnsemblProtists:DDB0266742 GeneID:8624834
KEGG:ddi:DDB_G0284903 OMA:YRTESEN Uniprot:Q54NZ5
Length = 769
Score = 1523 (541.2 bits), Expect = 3.0e-156, P = 3.0e-156
Identities = 292/527 (55%), Positives = 390/527 (74%)
Query: 1 MVLHKFGEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILM 60
MVL K G+ LY+ L + HLK ++K++ + FL ELN W +H ++ MIRDILM
Sbjct: 60 MVLQKHGDLLYNNLKKMVDKHLKAVAKTVSESIDEKFLLELNSSWINHKTSMLMIRDILM 119
Query: 61 YMDRTYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR 120
YMDR Y+ + + V +LGL L+RDN+ + I+ RLLNTLL +V +ER GEVI+R L++
Sbjct: 120 YMDRNYVKQNNLSSVFDLGLYLFRDNVAHCSTIKDRLLNTLLSMVQKEREGEVIDRILIK 179
Query: 121 NIIKMLMDLG---PSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEE 177
NI++ML+DLG +VY EDFEKP L ++ Y+ +SQ I+ C C +Y+KK E L EE
Sbjct: 180 NIVQMLIDLGVNSKNVYIEDFEKPLLLKTSSHYQAQSQTLIQTCSCPDYMKKVEICLKEE 239
Query: 178 MERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFR 237
+ERV+HYLD+ SE K+ V EK++I+NHM L+ M+NSGL++ML DDK EDL RMYNLF
Sbjct: 240 LERVSHYLDSSSEPKLKEVCEKQLISNHMRTLIDMENSGLISMLKDDKIEDLKRMYNLFS 299
Query: 238 RVPSGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDK 297
RV GL +++V++S+++E G+ +V D E+ K+ + Q LLD KDKYDN++ +A NDK
Sbjct: 300 RVSDGLNLMKDVISSYVKEIGRGIVMDEEKTKESGTYFQSLLDLKDKYDNLLQNALYNDK 359
Query: 298 TFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQE 357
F +++ +FEYFINLNP+SPE+ISLF+D+KL+KGLKGVSEE+V+ ILDK++MLFR +QE
Sbjct: 360 QFIHSIQQAFEYFINLNPKSPEYISLFIDEKLKKGLKGVSEEEVDIILDKILMLFRLIQE 419
Query: 358 KDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTM 417
KDVFEKYYKQHLAKRLL G+++SDDAER++I KLKTECGYQFTSKLEGMFTDM+ SQDTM
Sbjct: 420 KDVFEKYYKQHLAKRLLLGRSISDDAERNMIAKLKTECGYQFTSKLEGMFTDMRLSQDTM 479
Query: 418 HEF--YASHPELGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGR 475
F Y + + L V VLTTG WPTQ + CNLP E+ CE F+SYYL H GR
Sbjct: 480 SGFKTYIQNLKKALPIDLNVHVLTTGFWPTQNTANCNLPREILLCCEAFKSYYLSNHNGR 539
Query: 476 RLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
L WQTNMG+A+IKA F + HEL VS+YQM +L+LFN+ +L+++
Sbjct: 540 LLLWQTNMGTAEIKANF-PSKSHELQVSSYQMVILLLFNDQSKLTFK 585
>UNIPROTKB|Q13618 [details] [associations]
symbol:CUL3 "Cullin-3" species:9606 "Homo sapiens"
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0001831 "trophectodermal cellular morphogenesis" evidence=IEA]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0030332 "cyclin binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0031463 "Cul3-RING ubiquitin ligase complex"
evidence=IDA] [GO:0000090 "mitotic anaphase" evidence=IMP]
[GO:0000910 "cytokinesis" evidence=IMP] [GO:0005827 "polar
microtubule" evidence=IDA] [GO:0051322 "anaphase" evidence=IMP]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0035024 "negative regulation of Rho
protein signal transduction" evidence=IMP] [GO:0043149 "stress
fiber assembly" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IDA]
[GO:0006513 "protein monoubiquitination" evidence=IDA] [GO:0048208
"COPII vesicle coating" evidence=IMP] [GO:0007229
"integrin-mediated signaling pathway" evidence=ISS] [GO:0017145
"stem cell division" evidence=ISS] [GO:0040016 "embryonic cleavage"
evidence=ISS] [GO:0032467 "positive regulation of cytokinesis"
evidence=IMP] [GO:0000209 "protein polyubiquitination"
evidence=IDA] [GO:0031208 "POZ domain binding" evidence=IDA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=TAS] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0008054 "cyclin catabolic process" evidence=IDA]
[GO:0007050 "cell cycle arrest" evidence=TAS] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005634
GO:GO:0005794 Reactome:REACT_6900
Pathway_Interaction_DB:aurora_b_pathway GO:GO:0016477 GO:GO:0000090
GO:GO:0016055 GO:GO:0000082 GO:GO:0008284 EMBL:CH471063
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007050 GO:GO:0040016
GO:GO:0000910 GO:GO:0007229 GO:GO:0035024 GO:GO:0097193
eggNOG:COG5647 GO:GO:0008054 SUPFAM:SSF75632 GO:GO:0007369
GO:GO:0043149 GO:GO:0031463 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0005827 KO:K03869 OMA:ATFYGPI GO:GO:0048208
GO:GO:0017145 EMBL:AF064087 EMBL:AB014517 EMBL:AF062537
EMBL:AY337761 EMBL:AK291151 EMBL:AC073052 EMBL:AC092679
EMBL:BC031844 EMBL:BC039598 EMBL:BC092409 EMBL:U58089 EMBL:AF052147
IPI:IPI00014312 IPI:IPI00382458 IPI:IPI00382459
RefSeq:NP_001244126.1 RefSeq:NP_001244127.1 RefSeq:NP_003581.1
UniGene:Hs.372286 PDB:4AP2 PDB:4APF PDB:4EOZ PDBsum:4AP2
PDBsum:4APF PDBsum:4EOZ ProteinModelPortal:Q13618 SMR:Q13618
DIP:DIP-31611N IntAct:Q13618 STRING:Q13618 PhosphoSite:Q13618
DMDM:12643396 PaxDb:Q13618 PRIDE:Q13618 Ensembl:ENST00000264414
Ensembl:ENST00000344951 Ensembl:ENST00000409096
Ensembl:ENST00000409777 GeneID:8452 KEGG:hsa:8452 UCSC:uc002vny.2
UCSC:uc010zls.1 CTD:8452 GeneCards:GC02M225298 HGNC:HGNC:2553
HPA:CAB002678 MIM:603136 MIM:614496 neXtProt:NX_Q13618
Orphanet:300530 PharmGKB:PA27049 HOVERGEN:HBG003619
InParanoid:Q13618 OrthoDB:EOG4JWVCW PhylomeDB:Q13618 ChiTaRS:CUL3
GenomeRNAi:8452 NextBio:31630 ArrayExpress:Q13618 Bgee:Q13618
CleanEx:HS_CUL3 Genevestigator:Q13618 GermOnline:ENSG00000036257
GO:GO:0001831 Uniprot:Q13618
Length = 768
Score = 1369 (487.0 bits), Expect = 6.7e-147, Sum P(2) = 6.7e-147
Identities = 274/509 (53%), Positives = 366/509 (71%)
Query: 1 MVLHKFGEKLYSGLVSTMTLHL-KEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDIL 59
MVLHK GEKLY+GL +T HL ++ + + + +FL+ LN+ WNDH A+ MIRDIL
Sbjct: 64 MVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDIL 123
Query: 60 MYMDRTYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLM 119
MYMDR Y+ + V+ LGL ++RD +VR I+ L TLL+++ RER GEV++RG +
Sbjct: 124 MYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAI 183
Query: 120 RNIIKMLMDLG---PSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNE 176
RN +MLM LG SVY+EDFE PFLE+SAEF+++ESQKF+ Y+KK E R+NE
Sbjct: 184 RNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINE 243
Query: 177 EMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLF 236
E+ERV H LD +E I VVE+E+I+ HM +V M+NSGLV+ML + K EDLG MY LF
Sbjct: 244 EIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLGCMYKLF 303
Query: 237 RRVPSGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNND 296
RVP+GL T+ E M+S+LRE GK LV++ K+PV+++Q LLD K ++D + +FNND
Sbjct: 304 SRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLLESFNND 363
Query: 297 KTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQ 356
+ F+ + FEYF+NLN RSPE++SLF+DDKL+KG+KG++E++VETILDK M+LFR++Q
Sbjct: 364 RLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVETILDKAMVLFRFMQ 423
Query: 357 EKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDT 416
EKDVFE+YYKQHLA+RLL+ K+VSDD+E+++I KLKTECG QFTSKLEGMF DM S T
Sbjct: 424 EKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTT 483
Query: 417 MHEF----YASHPELGDSRTLVVQVLTTGSWPTQPSVT-CNLPAEMSALCEKFRSYYLGT 471
M EF A+ LG L V+VLTTG WPTQ + CN+P E FR +YL
Sbjct: 484 MDEFRQHLQATGVSLGGV-DLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAK 542
Query: 472 HTGRRLSWQTNMGSADIKATF-GKGQKHE 499
H+GR+L+ Q +MGSAD+ ATF G +K +
Sbjct: 543 HSGRQLTLQHHMGSADLNATFYGPVKKED 571
Score = 87 (35.7 bits), Expect = 6.7e-147, Sum P(2) = 6.7e-147
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 481 TNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
+ +G + T +KH L VST+QM +LMLFNN ++ +++
Sbjct: 573 SEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFE 614
>UNIPROTKB|E1BYQ3 [details] [associations]
symbol:CUL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0000090 "mitotic anaphase" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0001831
"trophectodermal cellular morphogenesis" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005827 "polar microtubule" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0007229 "integrin-mediated
signaling pathway" evidence=IEA] [GO:0007369 "gastrulation"
evidence=IEA] [GO:0008054 "cyclin catabolic process" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0016477 "cell migration" evidence=IEA] [GO:0017145 "stem cell
division" evidence=IEA] [GO:0030332 "cyclin binding" evidence=IEA]
[GO:0031463 "Cul3-RING ubiquitin ligase complex" evidence=IEA]
[GO:0035024 "negative regulation of Rho protein signal
transduction" evidence=IEA] [GO:0040016 "embryonic cleavage"
evidence=IEA] [GO:0043149 "stress fiber assembly" evidence=IEA]
[GO:0048208 "COPII vesicle coating" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0005634
GO:GO:0005794 GO:GO:0016477 GO:GO:0000090 GO:GO:0016055
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000910 GO:GO:0007229
GO:GO:0035024 GO:GO:0004842 GO:GO:0008054 SUPFAM:SSF75632
GO:GO:0043149 GO:GO:0031463 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0005827
OMA:ATFYGPI GO:GO:0048208 GO:GO:0017145 EMBL:AADN02024135
IPI:IPI00576031 Ensembl:ENSGALT00000008191 Uniprot:E1BYQ3
Length = 746
Score = 1365 (485.6 bits), Expect = 1.8e-146, Sum P(2) = 1.8e-146
Identities = 272/508 (53%), Positives = 363/508 (71%)
Query: 1 MVLHKFGEKLYSGLVSTMTLHL-KEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDIL 59
MVLHK GEKLY+GL +T HL ++ + + + +FL+ LN+ WNDH A+ MIRDIL
Sbjct: 42 MVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDIL 101
Query: 60 MYMDRTYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLM 119
MYMDR Y+ + V+ LGL ++RD +VR I+ L TLL+++ RER GEV++RG +
Sbjct: 102 MYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAI 161
Query: 120 RNIIKMLMDLG---PSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNE 176
RN +MLM LG SVY+EDFE PFLE+SAEF+++ESQKF+ Y+KK E R+NE
Sbjct: 162 RNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINE 221
Query: 177 EMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLF 236
E+ERV H LD +E I VVE+E+I+ HM +V M+NSGLV+ML + K EDL MY LF
Sbjct: 222 EIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLF 281
Query: 237 RRVPSGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNND 296
RVP+GL T+ E M+S+LRE GK LV++ K+PV+++Q LLD K ++D + +FNND
Sbjct: 282 SRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFNND 341
Query: 297 KTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQ 356
+ F+ + FEYF+NLN RSPE++SLF+DDKL+KG+KG++E++VETILDK M+LFR++Q
Sbjct: 342 RLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVETILDKAMVLFRFMQ 401
Query: 357 EKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDT 416
EKDVFE+YYKQHLA+RLL+ K+VSDD+E+++I KLKTECG QFTSKLEGMF DM S T
Sbjct: 402 EKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTT 461
Query: 417 MHEFYASHPELGDSR---TLVVQVLTTGSWPTQPSVT-CNLPAEMSALCEKFRSYYLGTH 472
M EF G S L V+VLTTG WPTQ + CN+P E FR +YL H
Sbjct: 462 MDEFRQHLQSTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAKH 521
Query: 473 TGRRLSWQTNMGSADIKATF-GKGQKHE 499
+GR+L+ Q +MGSAD+ ATF G +K +
Sbjct: 522 SGRQLTLQHHMGSADLNATFYGPVKKED 549
Score = 87 (35.7 bits), Expect = 1.8e-146, Sum P(2) = 1.8e-146
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 481 TNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
+ +G + T +KH L VST+QM +LMLFNN ++ +++
Sbjct: 551 SEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFE 592
>UNIPROTKB|E1BIN5 [details] [associations]
symbol:CUL3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048208 "COPII vesicle coating" evidence=IEA]
[GO:0043149 "stress fiber assembly" evidence=IEA] [GO:0040016
"embryonic cleavage" evidence=IEA] [GO:0035024 "negative regulation
of Rho protein signal transduction" evidence=IEA] [GO:0031463
"Cul3-RING ubiquitin ligase complex" evidence=IEA] [GO:0030332
"cyclin binding" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0008054 "cyclin catabolic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007229 "integrin-mediated
signaling pathway" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0005827 "polar microtubule"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0001831 "trophectodermal
cellular morphogenesis" evidence=IEA] [GO:0000910 "cytokinesis"
evidence=IEA] [GO:0000090 "mitotic anaphase" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0005634
GO:GO:0005794 GO:GO:0016477 GO:GO:0000090 GO:GO:0016055
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016 GO:GO:0000910
GO:GO:0007229 GO:GO:0035024 GO:GO:0004842 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0007369 GO:GO:0043149 GO:GO:0031463
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 GO:GO:0005827 KO:K03869 OMA:ATFYGPI
GO:GO:0048208 GO:GO:0017145 CTD:8452 GO:GO:0001831
EMBL:DAAA02006055 EMBL:DAAA02006056 EMBL:DAAA02006057
EMBL:DAAA02006058 EMBL:DAAA02006059 IPI:IPI00712202
RefSeq:NP_001179735.1 UniGene:Bt.64031 PRIDE:E1BIN5
Ensembl:ENSBTAT00000029018 GeneID:534325 KEGG:bta:534325
NextBio:20876357 Uniprot:E1BIN5
Length = 768
Score = 1365 (485.6 bits), Expect = 1.8e-146, Sum P(2) = 1.8e-146
Identities = 273/509 (53%), Positives = 365/509 (71%)
Query: 1 MVLHKFGEKLYSGLVSTMTLHL-KEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDIL 59
MVLHK GEKLY+GL +T HL ++ + + + +FL+ LN+ WNDH A+ MIRDIL
Sbjct: 64 MVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDIL 123
Query: 60 MYMDRTYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLM 119
MYMDR Y+ + V+ LGL ++RD +VR I+ L TLL+++ RER GEV++RG +
Sbjct: 124 MYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAI 183
Query: 120 RNIIKMLMDLG---PSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNE 176
RN +MLM LG SVY+EDFE PFLE+SAEF+++ESQKF+ Y+KK E R+NE
Sbjct: 184 RNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINE 243
Query: 177 EMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLF 236
E+ERV H LD +E I VVE+E+I+ HM +V M+NSGLV+ML + K EDL MY LF
Sbjct: 244 EIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLF 303
Query: 237 RRVPSGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNND 296
RVP+GL T+ E M+S+LRE GK LV++ K+PV+++Q LLD K ++D + +FNND
Sbjct: 304 SRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFNND 363
Query: 297 KTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQ 356
+ F+ + FEYF+NLN RSPE++SLF+DDKL+KG+KG++E++VETILDK M+LFR++Q
Sbjct: 364 RLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVETILDKAMVLFRFMQ 423
Query: 357 EKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDT 416
EKDVFE+YYKQHLA+RLL+ K+VSDD+E+++I KLKTECG QFTSKLEGMF DM S T
Sbjct: 424 EKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTT 483
Query: 417 MHEF----YASHPELGDSRTLVVQVLTTGSWPTQPSVT-CNLPAEMSALCEKFRSYYLGT 471
M EF A+ LG L V+VLTTG WPTQ + CN+P E FR +YL
Sbjct: 484 MDEFRQHLQATGVSLGGV-DLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAK 542
Query: 472 HTGRRLSWQTNMGSADIKATF-GKGQKHE 499
H+GR+L+ Q +MGSAD+ ATF G +K +
Sbjct: 543 HSGRQLTLQHHMGSADLNATFYGPVKKED 571
Score = 87 (35.7 bits), Expect = 1.8e-146, Sum P(2) = 1.8e-146
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 481 TNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
+ +G + T +KH L VST+QM +LMLFNN ++ +++
Sbjct: 573 SEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFE 614
>UNIPROTKB|F1PU58 [details] [associations]
symbol:CUL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048208 "COPII vesicle coating" evidence=IEA]
[GO:0043149 "stress fiber assembly" evidence=IEA] [GO:0040016
"embryonic cleavage" evidence=IEA] [GO:0035024 "negative regulation
of Rho protein signal transduction" evidence=IEA] [GO:0031463
"Cul3-RING ubiquitin ligase complex" evidence=IEA] [GO:0030332
"cyclin binding" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0008054 "cyclin catabolic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007229 "integrin-mediated
signaling pathway" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0005827 "polar microtubule"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0001831 "trophectodermal
cellular morphogenesis" evidence=IEA] [GO:0000910 "cytokinesis"
evidence=IEA] [GO:0000090 "mitotic anaphase" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0005634
GO:GO:0005794 GO:GO:0016477 GO:GO:0000090 GO:GO:0016055
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016 GO:GO:0000910
GO:GO:0007229 GO:GO:0035024 GO:GO:0004842 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0007369 GO:GO:0043149 GO:GO:0031463
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 GO:GO:0005827 OMA:ATFYGPI
GO:GO:0048208 GO:GO:0017145 GO:GO:0001831 EMBL:AAEX03014406
ProteinModelPortal:F1PU58 Ensembl:ENSCAFT00000016275 Uniprot:F1PU58
Length = 750
Score = 1365 (485.6 bits), Expect = 1.8e-146, Sum P(2) = 1.8e-146
Identities = 273/509 (53%), Positives = 365/509 (71%)
Query: 1 MVLHKFGEKLYSGLVSTMTLHL-KEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDIL 59
MVLHK GEKLY+GL +T HL ++ + + + +FL+ LN+ WNDH A+ MIRDIL
Sbjct: 46 MVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDIL 105
Query: 60 MYMDRTYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLM 119
MYMDR Y+ + V+ LGL ++RD +VR I+ L TLL+++ RER GEV++RG +
Sbjct: 106 MYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAI 165
Query: 120 RNIIKMLMDLG---PSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNE 176
RN +MLM LG SVY+EDFE PFLE+SAEF+++ESQKF+ Y+KK E R+NE
Sbjct: 166 RNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINE 225
Query: 177 EMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLF 236
E+ERV H LD +E I VVE+E+I+ HM +V M+NSGLV+ML + K EDL MY LF
Sbjct: 226 EIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLF 285
Query: 237 RRVPSGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNND 296
RVP+GL T+ E M+S+LRE GK LV++ K+PV+++Q LLD K ++D + +FNND
Sbjct: 286 SRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFNND 345
Query: 297 KTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQ 356
+ F+ + FEYF+NLN RSPE++SLF+DDKL+KG+KG++E++VETILDK M+LFR++Q
Sbjct: 346 RLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVETILDKAMVLFRFMQ 405
Query: 357 EKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDT 416
EKDVFE+YYKQHLA+RLL+ K+VSDD+E+++I KLKTECG QFTSKLEGMF DM S T
Sbjct: 406 EKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTT 465
Query: 417 MHEF----YASHPELGDSRTLVVQVLTTGSWPTQPSVT-CNLPAEMSALCEKFRSYYLGT 471
M EF A+ LG L V+VLTTG WPTQ + CN+P E FR +YL
Sbjct: 466 MDEFRQHLQATGVSLGGV-DLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAK 524
Query: 472 HTGRRLSWQTNMGSADIKATF-GKGQKHE 499
H+GR+L+ Q +MGSAD+ ATF G +K +
Sbjct: 525 HSGRQLTLQHHMGSADLNATFYGPVKKED 553
Score = 87 (35.7 bits), Expect = 1.8e-146, Sum P(2) = 1.8e-146
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 481 TNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
+ +G + T +KH L VST+QM +LMLFNN ++ +++
Sbjct: 555 SEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFE 596
>RGD|1308190 [details] [associations]
symbol:Cul3 "cullin 3" species:10116 "Rattus norvegicus"
[GO:0000090 "mitotic anaphase" evidence=IEA;ISO] [GO:0000209
"protein polyubiquitination" evidence=ISO;ISS] [GO:0000902 "cell
morphogenesis" evidence=ISO] [GO:0000910 "cytokinesis"
evidence=IEA;ISO] [GO:0001701 "in utero embryonic development"
evidence=ISO] [GO:0001831 "trophectodermal cellular morphogenesis"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO;ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005794 "Golgi apparatus" evidence=IEA;ISO]
[GO:0005827 "polar microtubule" evidence=IEA;ISO] [GO:0006513
"protein monoubiquitination" evidence=ISO;ISS] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO;ISS] [GO:0007229
"integrin-mediated signaling pathway" evidence=ISO;ISS] [GO:0007369
"gastrulation" evidence=IEA;ISO] [GO:0008054 "cyclin catabolic
process" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA;ISO] [GO:0016477 "cell migration" evidence=IEA;ISO]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0017145
"stem cell division" evidence=ISO;ISS] [GO:0030332 "cyclin binding"
evidence=IEA;ISO] [GO:0031208 "POZ domain binding"
evidence=ISO;ISS] [GO:0031463 "Cul3-RING ubiquitin ligase complex"
evidence=ISO;ISS] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0032467 "positive regulation of cytokinesis"
evidence=ISO;ISS] [GO:0035024 "negative regulation of Rho protein
signal transduction" evidence=IEA;ISO] [GO:0040016 "embryonic
cleavage" evidence=ISO;ISS] [GO:0043149 "stress fiber assembly"
evidence=IEA;ISO] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0048208 "COPII
vesicle coating" evidence=ISO;ISS] [GO:0051322 "anaphase"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 RGD:1308190 GO:GO:0005634 GO:GO:0005794
GO:GO:0016477 GO:GO:0000090 GO:GO:0016055 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0040016 GO:GO:0000910 GO:GO:0007229
GO:GO:0035024 GO:GO:0004842 eggNOG:COG5647 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0007369 GO:GO:0043149 GO:GO:0031463
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 GO:GO:0005827 HOGENOM:HOG000176712
OMA:ATFYGPI GO:GO:0048208 GO:GO:0017145 HOVERGEN:HBG003619
OrthoDB:EOG4JWVCW GO:GO:0001831 EMBL:BC168969 IPI:IPI00209412
UniGene:Rn.101949 STRING:B5DF89 PRIDE:B5DF89
Ensembl:ENSRNOT00000021528 UCSC:RGD:1308190 Genevestigator:B5DF89
Uniprot:B5DF89
Length = 768
Score = 1365 (485.6 bits), Expect = 1.8e-146, Sum P(2) = 1.8e-146
Identities = 273/509 (53%), Positives = 365/509 (71%)
Query: 1 MVLHKFGEKLYSGLVSTMTLHL-KEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDIL 59
MVLHK GEKLY+GL +T HL ++ + + + +FL+ LN+ WNDH A+ MIRDIL
Sbjct: 64 MVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDIL 123
Query: 60 MYMDRTYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLM 119
MYMDR Y+ + V+ LGL ++RD +VR I+ L TLL+++ RER GEV++RG +
Sbjct: 124 MYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAI 183
Query: 120 RNIIKMLMDLG---PSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNE 176
RN +MLM LG SVY+EDFE PFLE+SAEF+++ESQKF+ Y+KK E R+NE
Sbjct: 184 RNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINE 243
Query: 177 EMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLF 236
E+ERV H LD +E I VVE+E+I+ HM +V M+NSGLV+ML + K EDL MY LF
Sbjct: 244 EIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLF 303
Query: 237 RRVPSGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNND 296
RVP+GL T+ E M+S+LRE GK LV++ K+PV+++Q LLD K ++D + +FNND
Sbjct: 304 SRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFNND 363
Query: 297 KTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQ 356
+ F+ + FEYF+NLN RSPE++SLF+DDKL+KG+KG++E++VETILDK M+LFR++Q
Sbjct: 364 RLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVETILDKAMVLFRFMQ 423
Query: 357 EKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDT 416
EKDVFE+YYKQHLA+RLL+ K+VSDD+E+++I KLKTECG QFTSKLEGMF DM S T
Sbjct: 424 EKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTT 483
Query: 417 MHEF----YASHPELGDSRTLVVQVLTTGSWPTQPSVT-CNLPAEMSALCEKFRSYYLGT 471
M EF A+ LG L V+VLTTG WPTQ + CN+P E FR +YL
Sbjct: 484 MDEFRQHLQATGVSLGGV-DLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAK 542
Query: 472 HTGRRLSWQTNMGSADIKATF-GKGQKHE 499
H+GR+L+ Q +MGSAD+ ATF G +K +
Sbjct: 543 HSGRQLTLQHHMGSADLNATFYGPVKKED 571
Score = 87 (35.7 bits), Expect = 1.8e-146, Sum P(2) = 1.8e-146
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 481 TNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
+ +G + T +KH L VST+QM +LMLFNN ++ +++
Sbjct: 573 SEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFE 614
>ZFIN|ZDB-GENE-081007-1 [details] [associations]
symbol:cul3b "cullin 3b" species:7955 "Danio rerio"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-081007-1 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 KO:K03869
HOVERGEN:HBG003619 OrthoDB:EOG4JWVCW EMBL:BC163249 IPI:IPI00481059
RefSeq:NP_001177414.1 UniGene:Dr.150567 STRING:B3DIU1 GeneID:572370
KEGG:dre:572370 CTD:572370 NextBio:20890938 ArrayExpress:B3DIU1
Uniprot:B3DIU1
Length = 766
Score = 1365 (485.6 bits), Expect = 3.7e-146, Sum P(2) = 3.7e-146
Identities = 269/500 (53%), Positives = 360/500 (72%)
Query: 1 MVLHKFGEKLYSGLVSTMTLHL-KEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDIL 59
MVLHK GEKLY+GL +T HL ++ + + + +FL+ LN+ WNDH A+ MIRDIL
Sbjct: 63 MVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDIL 122
Query: 60 MYMDRTYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLM 119
MYMDR Y+ + V+ LGL ++RD +VR I+ L TLL+++ RER GEV++RG +
Sbjct: 123 MYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAI 182
Query: 120 RNIIKMLMDLG---PSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNE 176
RN +MLM LG SVY+EDFE PFLE+SAEF+++ESQKF+ Y+KK E R+NE
Sbjct: 183 RNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINE 242
Query: 177 EMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLF 236
E+ERV H LD +E I VVE+E+I+ HM +V M+NSGLV+ML + K EDL MY LF
Sbjct: 243 EIERVIHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLF 302
Query: 237 RRVPSGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNND 296
RVP+GL T+ E M+S+LRE GK LV++ K+PV+++Q LLD K ++D + +FNND
Sbjct: 303 SRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFNND 362
Query: 297 KTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQ 356
+ F+ + FEYF+NLN RSPE++SLF+DDKL+KG+KG++E++VE+ILDK M+LFR++Q
Sbjct: 363 RLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRFMQ 422
Query: 357 EKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDT 416
EKDVFE+YYKQHLA+RLL+ K+VSDD+E+++I KLKTECG QFTSKLEGMF DM S T
Sbjct: 423 EKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTT 482
Query: 417 MHEFYASHPELGDSR---TLVVQVLTTGSWPTQPSVT-CNLPAEMSALCEKFRSYYLGTH 472
M EF G S L+V+VLTTG WPTQ + CN+P E FR +YL H
Sbjct: 483 MDEFRQHLTSTGVSLGGVDLIVRVLTTGYWPTQSATPKCNIPPSPRHAFEVFRRFYLAKH 542
Query: 473 TGRRLSWQTNMGSADIKATF 492
+GR+L+ Q +MGSAD+ ATF
Sbjct: 543 SGRQLTLQHHMGSADLNATF 562
Score = 84 (34.6 bits), Expect = 3.7e-146, Sum P(2) = 3.7e-146
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 483 MGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
+G A + T +KH L VST+QM +LMLFNN ++ +++
Sbjct: 575 VGGAQV--TGSNTRKHILQVSTFQMTILMLFNNREKSTFE 612
>MGI|MGI:1347360 [details] [associations]
symbol:Cul3 "cullin 3" species:10090 "Mus musculus"
[GO:0000090 "mitotic anaphase" evidence=ISO] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0000902 "cell morphogenesis"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=ISO] [GO:0001701
"in utero embryonic development" evidence=IMP] [GO:0001831
"trophectodermal cellular morphogenesis" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0005827 "polar microtubule" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006513 "protein monoubiquitination" evidence=ISO] [GO:0006810
"transport" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=ISO] [GO:0007229 "integrin-mediated signaling
pathway" evidence=IMP] [GO:0007369 "gastrulation" evidence=IMP]
[GO:0008054 "cyclin catabolic process" evidence=ISS] [GO:0016055
"Wnt receptor signaling pathway" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0016477 "cell
migration" evidence=ISO] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0017145 "stem cell division" evidence=IMP]
[GO:0030332 "cyclin binding" evidence=IPI] [GO:0031208 "POZ domain
binding" evidence=ISO] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031463 "Cul3-RING ubiquitin ligase
complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0032467 "positive regulation of
cytokinesis" evidence=ISO] [GO:0035024 "negative regulation of Rho
protein signal transduction" evidence=ISO] [GO:0040016 "embryonic
cleavage" evidence=IMP] [GO:0043149 "stress fiber assembly"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0048208 "COPII vesicle
coating" evidence=ISO] [GO:0051322 "anaphase" evidence=ISO]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
MGI:MGI:1347360 GO:GO:0005634 GO:GO:0005794 GO:GO:0016477
GO:GO:0000090 GO:GO:0016055 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0040016 GO:GO:0000910 GO:GO:0007229 GO:GO:0035024
GO:GO:0004842 eggNOG:COG5647 GO:GO:0008054 SUPFAM:SSF75632
GO:GO:0007369 GO:GO:0043149 GO:GO:0031463 GO:GO:0006513
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
GO:GO:0005827 KO:K03869 OMA:ATFYGPI GO:GO:0048208 GO:GO:0017145
CTD:8452 HOVERGEN:HBG003619 OrthoDB:EOG4JWVCW ChiTaRS:CUL3
GO:GO:0001831 EMBL:AF129738 EMBL:BC027304 IPI:IPI00467383
RefSeq:NP_057925.1 UniGene:Mm.12665 PDB:1IUY PDBsum:1IUY
ProteinModelPortal:Q9JLV5 SMR:Q9JLV5 IntAct:Q9JLV5 STRING:Q9JLV5
PhosphoSite:Q9JLV5 PaxDb:Q9JLV5 PRIDE:Q9JLV5
Ensembl:ENSMUST00000163119 GeneID:26554 KEGG:mmu:26554
InParanoid:Q9JLV5 EvolutionaryTrace:Q9JLV5 NextBio:304599
Bgee:Q9JLV5 CleanEx:MM_CUL3 Genevestigator:Q9JLV5
GermOnline:ENSMUSG00000004364 Uniprot:Q9JLV5
Length = 768
Score = 1360 (483.8 bits), Expect = 6.0e-146, Sum P(2) = 6.0e-146
Identities = 272/509 (53%), Positives = 364/509 (71%)
Query: 1 MVLHKFGEKLYSGLVSTMTLHL-KEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDIL 59
MVLHK GEKLY+GL +T HL ++ + + + +FL+ LN+ WNDH A+ MIRDIL
Sbjct: 64 MVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDIL 123
Query: 60 MYMDRTYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLM 119
MYMDR Y+ + V+ LGL ++RD +VR I+ L TLL+++ RER GEV++RG +
Sbjct: 124 MYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAI 183
Query: 120 RNIIKMLMDLG---PSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNE 176
RN +MLM LG SVY+EDFE PFLE+SAEF+++ESQKF+ Y+KK E R+NE
Sbjct: 184 RNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINE 243
Query: 177 EMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLF 236
E+ERV H LD +E I VVE+E+I+ HM +V M+NSGLV+ML + K EDL MY LF
Sbjct: 244 EIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLF 303
Query: 237 RRVPSGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNND 296
RVP+GL T+ E M+ +LRE GK LV++ K+PV+++Q LLD K ++D + +FNND
Sbjct: 304 SRVPNGLKTMCECMSCYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFNND 363
Query: 297 KTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQ 356
+ F+ + FEYF+NLN RSPE++SLF+DDKL+KG+KG++E++VETILDK M+LFR++Q
Sbjct: 364 RLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVETILDKAMVLFRFMQ 423
Query: 357 EKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDT 416
EKDVFE+YYKQHLA+RLL+ K+VSDD+E+++I KLKTECG QFTSKLEGMF DM S T
Sbjct: 424 EKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTT 483
Query: 417 MHEF----YASHPELGDSRTLVVQVLTTGSWPTQPSVT-CNLPAEMSALCEKFRSYYLGT 471
M EF A+ LG L V+VLTTG WPTQ + CN+P E FR +YL
Sbjct: 484 MDEFRQHLQATGVSLGGV-DLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAK 542
Query: 472 HTGRRLSWQTNMGSADIKATF-GKGQKHE 499
H+GR+L+ Q +MGSAD+ ATF G +K +
Sbjct: 543 HSGRQLTLQHHMGSADLNATFYGPVKKED 571
Score = 87 (35.7 bits), Expect = 6.0e-146, Sum P(2) = 6.0e-146
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 481 TNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
+ +G + T +KH L VST+QM +LMLFNN ++ +++
Sbjct: 573 SEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFE 614
>UNIPROTKB|Q6DE95 [details] [associations]
symbol:cul3a "Cullin-3-A" species:8355 "Xenopus laevis"
[GO:0000090 "mitotic anaphase" evidence=ISS] [GO:0000910
"cytokinesis" evidence=ISS] [GO:0005827 "polar microtubule"
evidence=ISS] [GO:0006513 "protein monoubiquitination"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0007229 "integrin-mediated signaling pathway"
evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0017145
"stem cell division" evidence=ISS] [GO:0031463 "Cul3-RING ubiquitin
ligase complex" evidence=ISS] [GO:0035024 "negative regulation of
Rho protein signal transduction" evidence=ISS] [GO:0040016
"embryonic cleavage" evidence=ISS] [GO:0043149 "stress fiber
assembly" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048208 "COPII vesicle coating" evidence=ISS] [GO:0051322
"anaphase" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0043161 GO:GO:0016477
GO:GO:0000090 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016
GO:GO:0000910 GO:GO:0007229 GO:GO:0035024 SUPFAM:SSF75632
GO:GO:0043149 GO:GO:0031463 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0005827 HSSP:Q9JLV5 KO:K03869 EMBL:BC077239
RefSeq:NP_001086652.1 UniGene:Xl.48191 ProteinModelPortal:Q6DE95
SMR:Q6DE95 PRIDE:Q6DE95 GeneID:446487 KEGG:xla:446487 CTD:446487
Xenbase:XB-GENE-974989 GO:GO:0048208 GO:GO:0017145 Uniprot:Q6DE95
Length = 768
Score = 1349 (479.9 bits), Expect = 3.3e-145, Sum P(2) = 3.3e-145
Identities = 269/508 (52%), Positives = 362/508 (71%)
Query: 1 MVLHKFGEKLYSGLVSTMTLHL-KEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDIL 59
MVLHK GEKLY+GL +T HL ++ + + + +FL+ LN+ WNDH A+ MIRDIL
Sbjct: 64 MVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDIL 123
Query: 60 MYMDRTYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLM 119
MYMDR Y+ + V+ LGL ++RD +VR I+ L TLL+++ RER GEV++RG +
Sbjct: 124 MYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAI 183
Query: 120 RNIIKMLMDLG---PSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNE 176
RN +MLM LG SVY+EDFE PFLE+SAEF+++ESQKF+ Y+KK E R+NE
Sbjct: 184 RNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINE 243
Query: 177 EMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLF 236
E+ERV H LD +E I VVE+E+I+ HM +V M+NSGLV+ML + K EDL MY LF
Sbjct: 244 EIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLF 303
Query: 237 RRVPSGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNND 296
RVP+GL T+ E M+ +LRE GK LV++ K+PV+++Q LLD K ++D + +F+ND
Sbjct: 304 SRVPNGLKTMCECMSLYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFSND 363
Query: 297 KTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQ 356
+ F+ + FEYF+NLN RSPE++SLF+DDKL+KG+KG++E++VE+ILDK M+LFR++Q
Sbjct: 364 RLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRFMQ 423
Query: 357 EKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDT 416
EKDVFE+YYKQHLA+RLL+ K+VSDD+E+++I KLKTECG QFTSKLEGMF DM S T
Sbjct: 424 EKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTT 483
Query: 417 MHEFYASHPELGDSR---TLVVQVLTTGSWPTQPSVT-CNLPAEMSALCEKFRSYYLGTH 472
M EF G S L V+VLTTG WPTQ + CN+P E FR +YL H
Sbjct: 484 MDEFRQHLQTTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAKH 543
Query: 473 TGRRLSWQTNMGSADIKATF-GKGQKHE 499
+GR+L+ Q +MGSAD+ ATF G +K +
Sbjct: 544 SGRQLTLQHHMGSADLNATFYGPVKKED 571
Score = 91 (37.1 bits), Expect = 3.3e-145, Sum P(2) = 3.3e-145
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 481 TNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
+ +G + T +KH L VST+QM +LMLFNN D+ +++
Sbjct: 573 SEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNRDKYTFE 614
>UNIPROTKB|Q6GPF3 [details] [associations]
symbol:cul3b "Cullin-3-B" species:8355 "Xenopus laevis"
[GO:0000090 "mitotic anaphase" evidence=ISS] [GO:0000910
"cytokinesis" evidence=ISS] [GO:0005827 "polar microtubule"
evidence=ISS] [GO:0006513 "protein monoubiquitination"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0007229 "integrin-mediated signaling pathway"
evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0017145
"stem cell division" evidence=ISS] [GO:0031463 "Cul3-RING ubiquitin
ligase complex" evidence=ISS] [GO:0035024 "negative regulation of
Rho protein signal transduction" evidence=ISS] [GO:0040016
"embryonic cleavage" evidence=ISS] [GO:0043149 "stress fiber
assembly" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048208 "COPII vesicle coating" evidence=ISS] [GO:0051322
"anaphase" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0043161 GO:GO:0016477
GO:GO:0000090 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016
GO:GO:0000910 GO:GO:0007229 GO:GO:0035024 SUPFAM:SSF75632
GO:GO:0043149 GO:GO:0031463 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0005827 HSSP:Q9JLV5 KO:K03869 GO:GO:0048208
GO:GO:0017145 EMBL:BC073186 RefSeq:NP_001085677.1 UniGene:Xl.71281
ProteinModelPortal:Q6GPF3 SMR:Q6GPF3 PRIDE:Q6GPF3 GeneID:444103
KEGG:xla:444103 CTD:444103 Xenbase:XB-GENE-6256683 Uniprot:Q6GPF3
Length = 768
Score = 1351 (480.6 bits), Expect = 5.4e-145, Sum P(2) = 5.4e-145
Identities = 269/507 (53%), Positives = 360/507 (71%)
Query: 1 MVLHKFGEKLYSGLVSTMTLHL-KEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDIL 59
MVLHK GEKLY+GL +T HL ++ + + + +FL+ LN+ WNDH A+ MIRDIL
Sbjct: 64 MVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDIL 123
Query: 60 MYMDRTYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLM 119
MYMDR Y+ + V+ LGL ++RD +VR I+ L TLL+++ RER GEV++RG +
Sbjct: 124 MYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAI 183
Query: 120 RNIIKMLMDLG---PSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNE 176
RN +MLM LG SVY+EDFE PFLE+SAEF+++ESQKF+ Y+KK E R+NE
Sbjct: 184 RNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINE 243
Query: 177 EMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLF 236
E+ERV H LD +E I VVE+E+I+ HM +V M+NSGLV+ML + K EDL MY LF
Sbjct: 244 EIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLF 303
Query: 237 RRVPSGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNND 296
RVP+GL T+ E M+ +LRE GK LV++ K+PV+++Q LLD K ++D + +F+ND
Sbjct: 304 SRVPNGLKTMCECMSLYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFSND 363
Query: 297 KTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQ 356
+ F+ + FEYF+NLN RSPE++SLF+DDKL+KG+KG++E++VE+ILDK M+LFR++Q
Sbjct: 364 RLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRFMQ 423
Query: 357 EKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDT 416
EKDVFE+YYKQHLA+RLL+ K+VSDD+E+++I KLKTECG QFTSKLEGMF DM S T
Sbjct: 424 EKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTT 483
Query: 417 MHEFYASHPELGDSR---TLVVQVLTTGSWPTQPSVT-CNLPAEMSALCEKFRSYYLGTH 472
M EF G S L V+VLTTG WPTQ + CN+P E FR +YL H
Sbjct: 484 MDEFRQHLQTTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPSPRHAFEIFRRFYLAKH 543
Query: 473 TGRRLSWQTNMGSADIKATFGKGQKHE 499
+GR+L+ Q +MGSAD+ ATF K E
Sbjct: 544 SGRQLTLQHHMGSADLNATFYGAVKKE 570
Score = 87 (35.7 bits), Expect = 5.4e-145, Sum P(2) = 5.4e-145
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 481 TNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
+ +G + T +KH L VST+QM +LMLFNN ++ +++
Sbjct: 573 SEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFE 614
>UNIPROTKB|A4IHP4 [details] [associations]
symbol:cul3 "Cullin-3" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0000090 "mitotic anaphase" evidence=ISS]
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0005827 "polar
microtubule" evidence=ISS] [GO:0006513 "protein monoubiquitination"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0007229 "integrin-mediated signaling pathway"
evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0017145
"stem cell division" evidence=ISS] [GO:0031463 "Cul3-RING ubiquitin
ligase complex" evidence=ISS] [GO:0035024 "negative regulation of
Rho protein signal transduction" evidence=ISS] [GO:0040016
"embryonic cleavage" evidence=ISS] [GO:0043149 "stress fiber
assembly" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048208 "COPII vesicle coating" evidence=ISS] [GO:0051322
"anaphase" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0043161 GO:GO:0016477
GO:GO:0000090 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016
GO:GO:0000910 GO:GO:0007229 GO:GO:0035024 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0043149 GO:GO:0031463 GO:GO:0006513
InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0005827
HOGENOM:HOG000176712 KO:K03869 GO:GO:0048208 GO:GO:0017145 CTD:8452
OrthoDB:EOG4JWVCW EMBL:BC135616 RefSeq:NP_001015975.2
UniGene:Str.1179 ProteinModelPortal:A4IHP4 SMR:A4IHP4 STRING:A4IHP4
GeneID:548729 KEGG:xtr:548729 Xenbase:XB-GENE-974982 Bgee:A4IHP4
Uniprot:A4IHP4
Length = 768
Score = 1349 (479.9 bits), Expect = 8.8e-145, Sum P(2) = 8.8e-145
Identities = 269/508 (52%), Positives = 362/508 (71%)
Query: 1 MVLHKFGEKLYSGLVSTMTLHL-KEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDIL 59
MVLHK GEKLY+GL +T HL ++ + + + +FL+ LN+ WNDH A+ MIRDIL
Sbjct: 64 MVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDIL 123
Query: 60 MYMDRTYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLM 119
MYMDR Y+ + V+ LGL ++RD +VR I+ L TLL+++ RER GEV++RG +
Sbjct: 124 MYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAI 183
Query: 120 RNIIKMLMDLG---PSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNE 176
RN +MLM LG SVY+EDFE PFLE+SAEF+++ESQKF+ Y+KK E R+NE
Sbjct: 184 RNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINE 243
Query: 177 EMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLF 236
E+ERV H LD +E I VVE+E+I+ HM +V M+NSGLV+ML + K EDL MY LF
Sbjct: 244 EIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLF 303
Query: 237 RRVPSGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNND 296
RVP+GL T+ E M+ +LRE GK LV++ K+PV+++Q LLD K ++D + +F+ND
Sbjct: 304 SRVPNGLKTMCECMSLYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFSND 363
Query: 297 KTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQ 356
+ F+ + FEYF+NLN RSPE++SLF+DDKL+KG+KG++E++VE+ILDK M+LFR++Q
Sbjct: 364 RLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRFMQ 423
Query: 357 EKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDT 416
EKDVFE+YYKQHLA+RLL+ K+VSDD+E+++I KLKTECG QFTSKLEGMF DM S T
Sbjct: 424 EKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTT 483
Query: 417 MHEFYASHPELGDSR---TLVVQVLTTGSWPTQPSVT-CNLPAEMSALCEKFRSYYLGTH 472
M EF G S L V+VLTTG WPTQ + CN+P E FR +YL H
Sbjct: 484 MDEFRQHLQTTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAKH 543
Query: 473 TGRRLSWQTNMGSADIKATF-GKGQKHE 499
+GR+L+ Q +MGSAD+ ATF G +K +
Sbjct: 544 SGRQLTLQHHMGSADLNATFYGPVKKED 571
Score = 87 (35.7 bits), Expect = 8.8e-145, Sum P(2) = 8.8e-145
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 481 TNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
+ +G + T +KH L VST+QM +LMLFNN ++ +++
Sbjct: 573 SEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFE 614
>ZFIN|ZDB-GENE-030131-3376 [details] [associations]
symbol:cul3a "cullin 3a" species:7955 "Danio
rerio" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-030131-3376 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 KO:K03869 HOVERGEN:HBG003619 EMBL:AY423034
IPI:IPI00921732 RefSeq:NP_955985.1 UniGene:Dr.75956
ProteinModelPortal:Q6TEL5 SMR:Q6TEL5 STRING:Q6TEL5 GeneID:324655
KEGG:dre:324655 CTD:324655 InParanoid:Q6TEL5 NextBio:20808899
ArrayExpress:Q6TEL5 Uniprot:Q6TEL5
Length = 766
Score = 1343 (477.8 bits), Expect = 6.1e-144, Sum P(2) = 6.1e-144
Identities = 266/501 (53%), Positives = 358/501 (71%)
Query: 1 MVLHKFGEKLYSGLVSTMTLHL-KEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDIL 59
MVLHK GEKLY+GL +T HL ++ + + + +FL+ LN+ WNDH A+ MIRDIL
Sbjct: 62 MVLHKHGEKLYTGLREVVTEHLINKVREDVLHSLNNNFLQTLNQAWNDHQTAMVMIRDIL 121
Query: 60 MYMDRTYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLM 119
MYMDR Y+ + V+ LGL ++RD +VR I+ L TLL+++ RER GEV++RG +
Sbjct: 122 MYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAI 181
Query: 120 RNIIKMLMDLG---PSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNE 176
RN +MLM LG SVY+EDFE PFL++SAEF+++ESQKF+ Y+KK E R+NE
Sbjct: 182 RNACQMLMVLGLKGRSVYEEDFEIPFLDMSAEFFQMESQKFLAENSASVYIKKVEARINE 241
Query: 177 EMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLF 236
E+ERV H LD +E I VVE+E+I+ HM +V M+NSGLV+ML + K EDL MY LF
Sbjct: 242 EIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLF 301
Query: 237 RRVPSGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNND 296
RVP+GL T+ E M+ +LRE GK LV++ K+PV+++Q LLD K ++D + +FNND
Sbjct: 302 GRVPNGLKTMCECMSWYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFNND 361
Query: 297 KTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQ 356
+ F+ + FEYF+NLN RSPE++SLF+DDKL+KG+KG++E++VE+ILDK M+LFR++Q
Sbjct: 362 RLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRFMQ 421
Query: 357 EKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDT 416
EKDVFE+YYKQHLA+RLL+ K+VSDD+E+++I KLKTECG QFTSKLEGMF DM S T
Sbjct: 422 EKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTT 481
Query: 417 MHEFYASHPELGDSRT----LVVQVLTTGSWPTQPSVT-CNLPAEMSALCEKFRSYYLGT 471
M EF H + L V+VLTTG WPTQ + CN+P E FR +YL
Sbjct: 482 MDEF-RHHLQTSQVSLCGVDLTVRVLTTGYWPTQSATPKCNIPPSPRHAFEVFRRFYLAK 540
Query: 472 HTGRRLSWQTNMGSADIKATF 492
H+GR+L+ Q +MGSAD+ ATF
Sbjct: 541 HSGRQLTLQHHMGSADLNATF 561
Score = 85 (35.0 bits), Expect = 6.1e-144, Sum P(2) = 6.1e-144
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 481 TNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
+++G T +KH L VST+QM +LMLFNN ++ +++
Sbjct: 571 SDVGVGGALLTGSNTRKHILQVSTFQMTILMLFNNREKFTFE 612
>FB|FBgn0261268 [details] [associations]
symbol:Cul-3 "Cullin-3" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0030162 "regulation of proteolysis" evidence=NAS]
[GO:0001745 "compound eye morphogenesis" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=NAS] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007476 "imaginal disc-derived wing morphogenesis"
evidence=IMP] [GO:0007423 "sensory organ development" evidence=IMP]
[GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0031463 "Cul3-RING ubiquitin
ligase complex" evidence=IPI] [GO:0007291 "sperm individualization"
evidence=IMP] [GO:0016567 "protein ubiquitination" evidence=IMP]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IMP] [GO:0030431 "sleep"
evidence=IMP] [GO:0045475 "locomotor rhythm" evidence=IMP]
[GO:0045187 "regulation of circadian sleep/wake cycle, sleep"
evidence=IMP] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:AE014134 GO:GO:0030431 GO:GO:0030162 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0048813 GO:GO:0006919 GO:GO:0007291
GO:GO:0007409 GO:GO:0045475 GO:GO:0006511 GO:GO:0019005
GO:GO:0004842 GO:GO:0007476 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031463 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 GO:GO:0001745 KO:K03869 CTD:34896
OMA:YRTESEN EMBL:BT133182 RefSeq:NP_723909.2 UniGene:Dm.18043
SMR:Q8IP45 IntAct:Q8IP45 EnsemblMetazoa:FBtr0302159 GeneID:34896
KEGG:dme:Dmel_CG42616 UCSC:CG31829-RA FlyBase:FBgn0261268
OrthoDB:EOG43R22K ChiTaRS:Cul-3 GenomeRNAi:34896 NextBio:790768
Uniprot:Q8IP45
Length = 934
Score = 1202 (428.2 bits), Expect = 1.3e-130, Sum P(2) = 1.3e-130
Identities = 249/507 (49%), Positives = 338/507 (66%)
Query: 1 MVLHKFGEKLYSGLVSTMTLHLK-EISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDIL 59
MVLHK G +LY GL ++ HL+ ++ + A +FL +LN+ W DH ++ MIRDIL
Sbjct: 223 MVLHKHGNRLYYGLREVVSEHLEHKVRADVLEALHSNFLPKLNQAWTDHQTSMVMIRDIL 282
Query: 60 MYMDRTYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLM 119
MYMDR Y+ V+ LGL L+RD +VR ++IQ L LL +V ER GE IN +
Sbjct: 283 MYMDRVYVQQREVDNVYNLGLILFRDQVVRYSEIQKALREKLLGMVMEERHGEAINHLAI 342
Query: 120 RNIIKMLMDLG---PSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNE 176
+N ML+ LG +VY+EDFEKPFL SA FYK ESQ F+ + G Y+KK E R+ E
Sbjct: 343 KNACSMLITLGINSRTVYEEDFEKPFLAQSAAFYKFESQNFLAENNAGVYIKKVEARITE 402
Query: 177 EMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLF 236
E R YLD +E +I VVE+E+I HM +V M+NSG+V M+ + K EDL Y LF
Sbjct: 403 ESSRAALYLDKDTEPRIVRVVEEELIKKHMRPIVEMENSGVVYMIKNSKTEDLACTYKLF 462
Query: 237 RRVPS-GLLTIREVMTSHLRETGKQLVTDPERLK-DPVEFVQRLLDEKDKYDNIISSAFN 294
R+ GL I + M+++LRE G+ LV + E +P+ FVQ LLD KD++D + +F
Sbjct: 463 SRLKEEGLKVIADTMSAYLREQGRMLVKEEENGNTNPITFVQNLLDLKDRFDQFLVHSFA 522
Query: 295 NDKTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRY 354
ND+ F+N ++S FE+F+NLN +SPE++SLF+DDKL+KG KG+SE+++E+ILDK M+LFR+
Sbjct: 523 NDRIFKNVISSDFEHFLNLNNKSPEYLSLFIDDKLKKGGKGMSEQEIESILDKTMVLFRF 582
Query: 355 LQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQ 414
L EKDVFE+YYK HLAKRLL K+VSDD E+++I KLKTECG QFTSKLEGMF DM S
Sbjct: 583 LLEKDVFERYYKTHLAKRLLLNKSVSDDFEKNMISKLKTECGCQFTSKLEGMFKDMSVSN 642
Query: 415 DTMHEF--YASHPELG-DSRTLVVQVLTTGSWPTQPSV-TCNLPAEMSALCEKFRSYYLG 470
M EF + ++ L L V++LTTG WPTQ + CN+PA + F+++YL
Sbjct: 643 TIMDEFKNFVNNNNLSLGGVELTVRILTTGFWPTQTATPNCNIPAAPREAFDIFKNFYLN 702
Query: 471 THTGRRLSWQTNMGSADIKATFGKGQK 497
H+GR+L+ Q MG+A I A F G+K
Sbjct: 703 KHSGRQLTLQPQMGTAYINAVF-YGRK 728
Score = 100 (40.3 bits), Expect = 1.3e-130, Sum P(2) = 1.3e-130
Identities = 19/26 (73%), Positives = 22/26 (84%)
Query: 496 QKHELNVSTYQMCVLMLFNNADRLSY 521
+KH L VSTYQMCVL+LFNN D L+Y
Sbjct: 753 RKHILQVSTYQMCVLLLFNNRDVLTY 778
>WB|WBGene00000838 [details] [associations]
symbol:cul-3 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0035046 "pronuclear migration"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0044254 "multicellular organismal protein
catabolic process" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0008340 GO:GO:0009792
GO:GO:0035046 GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176712 KO:K03869
OMA:ATFYGPI EMBL:U58085 EMBL:FO081768 RefSeq:NP_503151.1
ProteinModelPortal:Q17391 SMR:Q17391 IntAct:Q17391 MINT:MINT-274347
STRING:Q17391 PaxDb:Q17391 PRIDE:Q17391 EnsemblMetazoa:Y108G3AL.1.1
EnsemblMetazoa:Y108G3AL.1.2 GeneID:178547 KEGG:cel:CELE_Y108G3AL.1
UCSC:Y108G3AL.1.1 CTD:34896 WormBase:Y108G3AL.1 InParanoid:Q17391
NextBio:901580 GO:GO:0044254 Uniprot:Q17391
Length = 777
Score = 1031 (368.0 bits), Expect = 3.1e-108, Sum P(2) = 3.1e-108
Identities = 221/511 (43%), Positives = 323/511 (63%)
Query: 1 MVLHKFGEKLYSGLVSTMTLHLKEIS-KSIEAAQGGSFLEELNRKWNDHNKALQMIRDIL 59
MVLHK GE+LY+GL + H+ + + IE+ GSFLE + W DH A+ MIRDIL
Sbjct: 61 MVLHKHGERLYNGLKDVIQDHMASVRIRIIESMNSGSFLETVAESWADHTVAMVMIRDIL 120
Query: 60 MYMDRTYIP-STHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGL 118
MYMDR Y+ + H PV+ LGL+ +R I+R N I R+ + LLEL+ +R IN
Sbjct: 121 MYMDRIYVAQNNHVLPVYNLGLDAYRTEILRQNGIGDRIRDALLELIKLDRKSNQINWHG 180
Query: 119 MRNIIKMLMDLG---PSVYQEDFEKPFLEVSAEFYKVESQKFIECC-DCGEYLKKAERRL 174
++N ML+ LG +VY+++FE+P L+ ++++Y+ + ++ D YL + E +
Sbjct: 181 IKNACDMLISLGIDSRTVYEDEFERPLLKETSDYYRDVCKNWLSGDNDACFYLAQVEIAM 240
Query: 175 NEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYN 234
++E R + YLD +EAKI V++ M+A H+ +V+M N G+ ML K EDL R++
Sbjct: 241 HDEASRASRYLDKMTEAKILQVMDDVMVAEHIQTIVYMQNGGVKFMLEHKKIEDLTRIFR 300
Query: 235 LFRR------VPSG-LLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDN 287
+F+R VP G L + + ++ +L ETG +V + + LK+PV FV LL KD + +
Sbjct: 301 IFKRIGDSVTVPGGGLKALLKAVSEYLNETGSNIVKNEDLLKNPVNFVNELLQLKDYFSS 360
Query: 288 IISSAFNNDKTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETILDK 347
++++AF +D+ F+N FE F+N N +SPEF++L++DD LR GLK VS+ +++ LD
Sbjct: 361 LLTTAFADDRDFKNRFQHDFETFLNSNRQSPEFVALYMDDMLRSGLKCVSDAEMDNKLDN 420
Query: 348 VMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMF 407
VM+LFRYLQEKDVFEKY+KQ+LAKRLL K+ SDD E++L+ KLKTECG QFT KLE MF
Sbjct: 421 VMILFRYLQEKDVFEKYFKQYLAKRLLLDKSCSDDVEKALLAKLKTECGCQFTQKLENMF 480
Query: 408 TDMK---TSQDTMHEFYASHPELGDSRTLVVQVLTTGSWPTQPSVTCN---LPAEMSALC 461
D + T + ++ + P S + ++VLT G WPT V CN LP E+S
Sbjct: 481 RDKELWLTLATSFRDWREAQPTKM-SIDISLRVLTAGVWPT---VQCNPVVLPQELSVAY 536
Query: 462 EKFRSYYLGTHTGRRLSWQTNMGSADIKATF 492
E F YY HTGR+L+ T +G+AD+KATF
Sbjct: 537 EMFTQYYTEKHTGRKLTINTLLGNADVKATF 567
Score = 59 (25.8 bits), Expect = 3.1e-108, Sum P(2) = 3.1e-108
Identities = 12/27 (44%), Positives = 21/27 (77%)
Query: 497 KHE-LNVSTYQMCVLMLFNNADRLSYQ 522
+H+ L V+T+QM +L+ FN+ +R+S Q
Sbjct: 597 EHKILQVNTHQMIILLQFNHHNRISCQ 623
>UNIPROTKB|Q17391 [details] [associations]
symbol:cul-3 "Cullin-3" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0035046
GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176712 KO:K03869 OMA:ATFYGPI EMBL:U58085
EMBL:FO081768 RefSeq:NP_503151.1 ProteinModelPortal:Q17391
SMR:Q17391 IntAct:Q17391 MINT:MINT-274347 STRING:Q17391
PaxDb:Q17391 PRIDE:Q17391 EnsemblMetazoa:Y108G3AL.1.1
EnsemblMetazoa:Y108G3AL.1.2 GeneID:178547 KEGG:cel:CELE_Y108G3AL.1
UCSC:Y108G3AL.1.1 CTD:34896 WormBase:Y108G3AL.1 InParanoid:Q17391
NextBio:901580 GO:GO:0044254 Uniprot:Q17391
Length = 777
Score = 1031 (368.0 bits), Expect = 3.1e-108, Sum P(2) = 3.1e-108
Identities = 221/511 (43%), Positives = 323/511 (63%)
Query: 1 MVLHKFGEKLYSGLVSTMTLHLKEIS-KSIEAAQGGSFLEELNRKWNDHNKALQMIRDIL 59
MVLHK GE+LY+GL + H+ + + IE+ GSFLE + W DH A+ MIRDIL
Sbjct: 61 MVLHKHGERLYNGLKDVIQDHMASVRIRIIESMNSGSFLETVAESWADHTVAMVMIRDIL 120
Query: 60 MYMDRTYIP-STHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGL 118
MYMDR Y+ + H PV+ LGL+ +R I+R N I R+ + LLEL+ +R IN
Sbjct: 121 MYMDRIYVAQNNHVLPVYNLGLDAYRTEILRQNGIGDRIRDALLELIKLDRKSNQINWHG 180
Query: 119 MRNIIKMLMDLG---PSVYQEDFEKPFLEVSAEFYKVESQKFIECC-DCGEYLKKAERRL 174
++N ML+ LG +VY+++FE+P L+ ++++Y+ + ++ D YL + E +
Sbjct: 181 IKNACDMLISLGIDSRTVYEDEFERPLLKETSDYYRDVCKNWLSGDNDACFYLAQVEIAM 240
Query: 175 NEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYN 234
++E R + YLD +EAKI V++ M+A H+ +V+M N G+ ML K EDL R++
Sbjct: 241 HDEASRASRYLDKMTEAKILQVMDDVMVAEHIQTIVYMQNGGVKFMLEHKKIEDLTRIFR 300
Query: 235 LFRR------VPSG-LLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDN 287
+F+R VP G L + + ++ +L ETG +V + + LK+PV FV LL KD + +
Sbjct: 301 IFKRIGDSVTVPGGGLKALLKAVSEYLNETGSNIVKNEDLLKNPVNFVNELLQLKDYFSS 360
Query: 288 IISSAFNNDKTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETILDK 347
++++AF +D+ F+N FE F+N N +SPEF++L++DD LR GLK VS+ +++ LD
Sbjct: 361 LLTTAFADDRDFKNRFQHDFETFLNSNRQSPEFVALYMDDMLRSGLKCVSDAEMDNKLDN 420
Query: 348 VMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMF 407
VM+LFRYLQEKDVFEKY+KQ+LAKRLL K+ SDD E++L+ KLKTECG QFT KLE MF
Sbjct: 421 VMILFRYLQEKDVFEKYFKQYLAKRLLLDKSCSDDVEKALLAKLKTECGCQFTQKLENMF 480
Query: 408 TDMK---TSQDTMHEFYASHPELGDSRTLVVQVLTTGSWPTQPSVTCN---LPAEMSALC 461
D + T + ++ + P S + ++VLT G WPT V CN LP E+S
Sbjct: 481 RDKELWLTLATSFRDWREAQPTKM-SIDISLRVLTAGVWPT---VQCNPVVLPQELSVAY 536
Query: 462 EKFRSYYLGTHTGRRLSWQTNMGSADIKATF 492
E F YY HTGR+L+ T +G+AD+KATF
Sbjct: 537 EMFTQYYTEKHTGRKLTINTLLGNADVKATF 567
Score = 59 (25.8 bits), Expect = 3.1e-108, Sum P(2) = 3.1e-108
Identities = 12/27 (44%), Positives = 21/27 (77%)
Query: 497 KHE-LNVSTYQMCVLMLFNNADRLSYQ 522
+H+ L V+T+QM +L+ FN+ +R+S Q
Sbjct: 597 EHKILQVNTHQMIILLQFNHHNRISCQ 623
>UNIPROTKB|F1SR61 [details] [associations]
symbol:LOC100511787 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
GO:GO:0005634 GO:GO:0005794 GO:GO:0016055 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0040016 GO:GO:0007229 GO:GO:0006511
SUPFAM:SSF75632 GO:GO:0031461 GO:GO:0007369 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 OMA:ATFYGPI
GO:GO:0017145 GO:GO:0001831 EMBL:AEMK01142839 EMBL:CU640472
EMBL:CU915646 Ensembl:ENSSSCT00000017677 Uniprot:F1SR61
Length = 550
Score = 975 (348.3 bits), Expect = 2.8e-105, Sum P(2) = 2.8e-105
Identities = 194/354 (54%), Positives = 257/354 (72%)
Query: 152 VESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVH 211
+ESQKF+ Y+KK E R+NEE+ERV H LD +E I VVE+E+I+ HM +V
Sbjct: 1 MESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVE 60
Query: 212 MDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREVMTSHLRETGKQLVTDPERLKDP 271
M+NSGLV+ML + K EDL MY LF RVP+GL T+ E M+S+LRE GK LV++ K+P
Sbjct: 61 MENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNP 120
Query: 272 VEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRK 331
V+++Q LLD K ++D + +FNND+ F+ + FEYF+NLN RSPE++SLF+DDKL+K
Sbjct: 121 VDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKK 180
Query: 332 GLKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKL 391
G+KG++E++VETILDK M+LFR++QEKDVFE+YYKQHLA+RLL+ K+VSDD+E+++I KL
Sbjct: 181 GVKGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKL 240
Query: 392 KTECGYQFTSKLEGMFTDMKTSQDTMHEF----YASHPELGDSRTLVVQVLTTGSWPTQP 447
KTECG QFTSKLEGMF DM S TM EF A+ LG L V+VLTTG WPTQ
Sbjct: 241 KTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQATGVSLGGV-DLTVRVLTTGYWPTQS 299
Query: 448 SVT-CNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATF-GKGQKHE 499
+ CN+P E FR +YL H+GR+L+ Q +MGSAD+ ATF G +K +
Sbjct: 300 ATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKED 353
Score = 87 (35.7 bits), Expect = 2.8e-105, Sum P(2) = 2.8e-105
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 481 TNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
+ +G + T +KH L VST+QM +LMLFNN ++ +++
Sbjct: 355 SEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFE 396
>MGI|MGI:1919834 [details] [associations]
symbol:Cul4b "cullin 4B" species:10090 "Mus musculus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031465 "Cul4B-RING ubiquitin ligase complex" evidence=ISO]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IMP] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 MGI:MGI:1919834
GO:GO:0005634 GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0007049 GO:GO:0006511 GO:GO:0045732
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0045750 EMBL:CH466570
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
KO:K10609 HOVERGEN:HBG003619 OrthoDB:EOG42FSH0 CTD:8450
GO:GO:0031465 EMBL:AY330868 EMBL:AK012410 EMBL:AK032701
EMBL:AK160998 EMBL:AL513356 EMBL:BC004026 EMBL:BC010347
EMBL:AB093259 IPI:IPI00224689 IPI:IPI00473987 RefSeq:NP_001103612.1
RefSeq:NP_082564.3 UniGene:Mm.327675 ProteinModelPortal:A2A432
SMR:A2A432 IntAct:A2A432 STRING:A2A432 PhosphoSite:A2A432
PaxDb:A2A432 PRIDE:A2A432 Ensembl:ENSMUST00000050083
Ensembl:ENSMUST00000115118 GeneID:72584 KEGG:mmu:72584
UCSC:uc009taa.2 InParanoid:Q91YZ7 ChiTaRS:CUL4B NextBio:336543
Bgee:A2A432 Genevestigator:A2A432 Uniprot:A2A432
Length = 970
Score = 998 (356.4 bits), Expect = 1.3e-100, P = 1.3e-100
Identities = 209/525 (39%), Positives = 324/525 (61%)
Query: 4 HKFGEKLYSGLVSTMTLHLK-EISKSIE-AAQGGSFLEELNRKWNDHNKALQMIRDILMY 61
HK LY L H+K +I + E + FL++++R W +H + + MIR I ++
Sbjct: 307 HKISANLYKQLRQICEDHIKAQIHQFREDSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLF 366
Query: 62 MDRTYIPSTHKTP-VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR 120
+DRTY+ P + ++GL L+R +I+ K+QT+ ++ +L L+ RER GE I+R L+R
Sbjct: 367 LDRTYVLQNSMLPSIWDMGLELFRAHIISDQKVQTKTIDGILLLIERERNGEAIDRSLLR 426
Query: 121 NIIKMLMDLGPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMER 180
+++ ML DL +YQ+ FE+ FL+ + Y E QK ++ + EYL +RL EE +R
Sbjct: 427 SLLSMLSDL--QIYQDSFEQQFLQETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADR 484
Query: 181 VTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVP 240
+ YLD ++ + VEK+++ H+ ++ GL ++L +++ +DL +Y LF RV
Sbjct: 485 LITYLDQTTQKSLIASVEKQLLGEHLTAILQ---KGLNSLLDENRIQDLSLLYQLFSRVR 541
Query: 241 SGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQ 300
G+ + + +++ G +V +PE KD VQ LLD KDK D+II + F ++ F
Sbjct: 542 GGVQVLLQQWIEYIKAFGSTIVINPE--KDKT-MVQELLDFKDKVDHIIDTCFLKNEKFI 598
Query: 301 NALNSSFEYFINLNPRSP-EFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKD 359
NA+ +FE FIN P P E I+ +VD KLR G K ++E++E +LDK+M++FR++ KD
Sbjct: 599 NAMKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKD 658
Query: 360 VFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHE 419
VFE +YK+ LAKRLL GK+ S DAE+S++ KLK ECG FTSKLEGMF DM+ S+D M +
Sbjct: 659 VFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQ 718
Query: 420 F--YASHPELGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRL 477
F Y + + + L V +LT G WPT + +LP EM L E F+++YLG H+GR+L
Sbjct: 719 FKQYMQNQNVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKL 778
Query: 478 SWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
WQ+ +G +KA F +G+K EL VS +Q VL++FN + S +
Sbjct: 779 QWQSTLGHCVLKAEFKEGKK-ELQVSLFQTMVLLMFNEGEEFSLE 822
>TAIR|locus:2162060 [details] [associations]
symbol:CUL4 "cullin4" species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0031461 "cullin-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009640 "photomorphogenesis" evidence=RCA;IMP]
[GO:0048366 "leaf development" evidence=RCA;IMP] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=IPI] [GO:0000151
"ubiquitin ligase complex" evidence=IPI] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0009908 "flower development"
evidence=IMP] [GO:0010100 "negative regulation of
photomorphogenesis" evidence=RCA;IMP] [GO:0048367 "shoot system
development" evidence=IMP] [GO:0009755 "hormone-mediated signaling
pathway" evidence=RCA;IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0006281 "DNA repair" evidence=RCA;IMP]
[GO:0048575 "short-day photoperiodism, flowering" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0009845 "seed germination" evidence=RCA] [GO:0009880 "embryonic
pattern specification" evidence=RCA] [GO:0009909 "regulation of
flower development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA] [GO:0050826
"response to freezing" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009738 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009640 GO:GO:0010182
GO:GO:0009755 GO:GO:0006511 GO:GO:0009908 GO:GO:0048366
GO:GO:0000209 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0048825
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 KO:K10609
GO:GO:0080008 GO:GO:0010100 HSSP:Q9JLV5 OMA:FEDSLDF EMBL:AJ318018
EMBL:AB025620 EMBL:AY091113 EMBL:AY084267 IPI:IPI00538554
RefSeq:NP_568658.1 UniGene:At.20972 ProteinModelPortal:Q8LGH4
SMR:Q8LGH4 DIP:DIP-40462N IntAct:Q8LGH4 STRING:Q8LGH4 PaxDb:Q8LGH4
PRIDE:Q8LGH4 EnsemblPlants:AT5G46210.1 GeneID:834663
KEGG:ath:AT5G46210 TAIR:At5g46210 InParanoid:Q8LGH4
PhylomeDB:Q8LGH4 ProtClustDB:CLSN2689940 Genevestigator:Q8LGH4
GO:GO:0048575 Uniprot:Q8LGH4
Length = 792
Score = 997 (356.0 bits), Expect = 1.7e-100, P = 1.7e-100
Identities = 217/529 (41%), Positives = 327/529 (61%)
Query: 1 MVLHKFGEKLYSGLVSTMTLHLKEISKSIEAAQGGS--FLEELNRKWNDHNKALQMIRDI 58
+ LHK KLY + H+ +S+ FL + + W D + MIR I
Sbjct: 126 LCLHKLDGKLYDQIEKECEEHISAALQSLVGQNTDLTVFLSRVEKCWQDFCDQMLMIRSI 185
Query: 59 LMYMDRTY-IPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRG 117
+ +DR Y I + + + E+GL L+R ++ + +++ R + LL ++ +ER E +NR
Sbjct: 186 ALTLDRKYVIQNPNVRSLWEMGLQLFRKHLSLAPEVEQRTVKGLLSMIEKERLAEAVNRT 245
Query: 118 LMRNIIKMLMDLGPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEE 177
L+ +++KM LG +Y E FEKPFLE ++EFY E K+++ D EYLK E RL+EE
Sbjct: 246 LLSHLLKMFTALG--IYMESFEKPFLEGTSEFYAAEGMKYMQQSDVPEYLKHVEGRLHEE 303
Query: 178 MERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFR 237
ER Y+DA + + VE++++ H+ LV ++ G ++ + EDL RM LF
Sbjct: 304 NERCILYIDAVTRKPLITTVERQLLERHI--LVVLEK-GFTTLMDGRRTEDLQRMQTLFS 360
Query: 238 RVPSGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDK 297
RV + L ++R+ ++S++R+TG+++V D E+ KD VQ LLD K D I +F ++
Sbjct: 361 RV-NALESLRQALSSYVRKTGQKIVMDEEKDKD---MVQSLLDFKASLDIIWEESFYKNE 416
Query: 298 TFQNALNSSFEYFINLNPRSP-EFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQ 356
+F N + SFE+ INL P E I+ F+D+KLR G KG SEE++E++L+KV++LFR++Q
Sbjct: 417 SFGNTIKDSFEHLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELESVLEKVLVLFRFIQ 476
Query: 357 EKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDT 416
KDVFE +YK+ LAKRLL GK+ S DAE+S+I KLKTECG QFT+KLEGMF D++ S++
Sbjct: 477 GKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEI 536
Query: 417 MHEFYAS---HPELGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHT 473
F S +L + V VLTTG WPT P + LP E++ + F+ +YL ++
Sbjct: 537 NESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVKLPHELNVYQDIFKEFYLSKYS 596
Query: 474 GRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
GRRL WQ ++G +KA F KG+K EL VS +Q VLMLFN+A +LS++
Sbjct: 597 GRRLMWQNSLGHCVLKADFSKGKK-ELAVSLFQAVVLMLFNDAMKLSFE 644
>ZFIN|ZDB-GENE-041008-208 [details] [associations]
symbol:cul4b "cullin 4B" species:7955 "Danio rerio"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-041008-208 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:BX004980
IPI:IPI00637421 Ensembl:ENSDART00000085295 ArrayExpress:F1R029
Bgee:F1R029 Uniprot:F1R029
Length = 885
Score = 997 (356.0 bits), Expect = 1.7e-100, P = 1.7e-100
Identities = 215/540 (39%), Positives = 329/540 (60%)
Query: 4 HKFGEKLYSGLVSTMTLHLK-EISKSIE-AAQGGSFLEELNRKWNDHNKALQMIRDILMY 61
HK KLY L H+K +I + E A FL+++++ W DH + + MIR I ++
Sbjct: 221 HKISAKLYKQLRVVCEDHIKAQIDQFREDALDSVLFLKKIDKCWQDHCRQMIMIRSIFLF 280
Query: 62 MDRTYIPSTHKTP-VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR 120
+DRTY+ P + ++GL L+R I+ K+Q++ ++ +L L+ RER+GE ++R L+R
Sbjct: 281 LDRTYVLQNSMLPSIWDMGLELFRFYIISDLKVQSKTIDGILLLIERERSGEAVDRSLLR 340
Query: 121 NIIKMLMDLGPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMER 180
+++ ML DL +YQ+ FE+ FLE + Y E Q+ ++ + EYL +RL EE +R
Sbjct: 341 SLLSMLSDL--QIYQDSFEQRFLEETNRLYAAEGQRLMQEREVPEYLHHVNKRLEEEADR 398
Query: 181 VTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVP 240
V YLD ++ + VEK+++ H+ ++ GL N+L +++ +DL +Y LF RV
Sbjct: 399 VITYLDQSTQKSLIATVEKQLLGEHLTAILQ---KGLNNLLDENRIQDLSLLYQLFSRVR 455
Query: 241 SGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQ 300
G+ + + +++ G +V +PE KD VQ LLD KDK D+II F ++ F
Sbjct: 456 GGVQVLLQHWIEYIKAFGSTIVINPE--KDKT-MVQELLDFKDKVDHIIDVCFMKNEKFV 512
Query: 301 NALNSSFEYFINLNPRSP-EFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQE-K 358
N + +FE FIN P P E I+ +VD KLR G K ++E++E +LDK+M++FR++ E K
Sbjct: 513 NGMKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYEGK 572
Query: 359 DVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMH 418
DVFE +YK+ LAKRLL GK+ S DAE+S++ KLK ECG FTSKLEGMF DM+ S+D M
Sbjct: 573 DVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMV 632
Query: 419 EF--YASHPELGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRR 476
+F + + + L V +LT G WPT + +LPAEM L E F+++YLG H+GR+
Sbjct: 633 QFKQHMQCQNIPGNIELTVNILTMGYWPTYVPMEVHLPAEMVRLQEIFKTFYLGKHSGRK 692
Query: 477 LSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQGNR--AGNRDSCFR 534
L WQ+ +G +KA F +G+K EL VS +Q VL++FN + S + + G DS R
Sbjct: 693 LQWQSTLGHCVLKAEFKEGKK-ELQVSLFQTLVLLMFNEGEEFSLEDIKLATGIEDSELR 751
>UNIPROTKB|E1BFD5 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045750 "positive regulation of S phase of mitotic cell
cycle" evidence=IEA] [GO:0045732 "positive regulation of protein
catabolic process" evidence=IEA] [GO:0031465 "Cul4B-RING ubiquitin
ligase complex" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 GO:GO:0045732 SUPFAM:SSF75632
GO:GO:0045750 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:FEDSLDF GO:GO:0031465
EMBL:DAAA02067221 EMBL:DAAA02067222 IPI:IPI00707913
Ensembl:ENSBTAT00000024713 Uniprot:E1BFD5
Length = 965
Score = 993 (354.6 bits), Expect = 4.4e-100, P = 4.4e-100
Identities = 209/525 (39%), Positives = 322/525 (61%)
Query: 4 HKFGEKLYSGLVSTMTLHLK-EISKSIE-AAQGGSFLEELNRKWNDHNKALQMIRDILMY 61
+K LY L H+K +I + E + FL++++R W +H + + MIR I ++
Sbjct: 302 YKISANLYKQLRQICEDHIKAQIHQFREYSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLF 361
Query: 62 MDRTYIPSTHKTP-VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR 120
+DRTY+ P + ++GL L+R +I+ K+Q + ++ +L L+ RER GE I+R L+R
Sbjct: 362 LDRTYVLQNSMLPSIWDMGLELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLR 421
Query: 121 NIIKMLMDLGPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMER 180
+++ ML DL +YQ+ FE+ FLE + Y E QK ++ + EYL +RL EE +R
Sbjct: 422 SLLSMLSDL--QIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADR 479
Query: 181 VTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVP 240
+ YLD ++ + VEK+++ H+ ++ GL N+L +++ +DL +Y LF RV
Sbjct: 480 LITYLDQTTQKSLIATVEKQLLGEHLTAILQ---KGLNNLLDENRIQDLSLLYQLFSRVR 536
Query: 241 SGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQ 300
G+ + + +++ G +V +PE KD VQ LLD KDK D+II F ++ F
Sbjct: 537 GGVQVLLQQWIEYIKAFGSTIVINPE--KDKT-MVQELLDFKDKVDHIIDICFLKNEKFI 593
Query: 301 NALNSSFEYFINLNPRSP-EFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKD 359
NA+ +FE FIN P P E I+ +VD KLR G K ++E++E +LDK+M++FR++ KD
Sbjct: 594 NAMKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKD 653
Query: 360 VFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHE 419
VFE +YK+ LAKRLL GK+ S DAE+S++ KLK ECG FTSKLEGMF DM+ S+D M +
Sbjct: 654 VFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQ 713
Query: 420 F--YASHPELGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRL 477
F Y + + + L V +LT G WPT + +LP EM L E F+++YLG H+GR+L
Sbjct: 714 FKQYMQNQNVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKL 773
Query: 478 SWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
WQ+ +G +KA F +G+K EL VS +Q VL++FN + S +
Sbjct: 774 QWQSTLGHCVLKAEFKEGKK-ELQVSLFQTLVLLMFNEGEEFSLE 817
>UNIPROTKB|K4DI93 [details] [associations]
symbol:CUL4B "Cullin 4B, isoform CRA_e" species:9606 "Homo
sapiens" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 EMBL:CH471107
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
EMBL:AC002476 EMBL:AL451005 HGNC:HGNC:2555 Ensembl:ENST00000336592
Uniprot:K4DI93
Length = 900
Score = 993 (354.6 bits), Expect = 4.4e-100, P = 4.4e-100
Identities = 209/525 (39%), Positives = 322/525 (61%)
Query: 4 HKFGEKLYSGLVSTMTLHLK-EISKSIE-AAQGGSFLEELNRKWNDHNKALQMIRDILMY 61
+K LY L H+K +I + E + FL++++R W +H + + MIR I ++
Sbjct: 237 YKISANLYKQLRQICEDHIKAQIHQFREDSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLF 296
Query: 62 MDRTYIPSTHKTP-VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR 120
+DRTY+ P + ++GL L+R +I+ K+Q + ++ +L L+ RER GE I+R L+R
Sbjct: 297 LDRTYVLQNSMLPSIWDMGLELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLR 356
Query: 121 NIIKMLMDLGPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMER 180
+++ ML DL +YQ+ FE+ FLE + Y E QK ++ + EYL +RL EE +R
Sbjct: 357 SLLSMLSDL--QIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADR 414
Query: 181 VTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVP 240
+ YLD ++ + VEK+++ H+ ++ GL N+L +++ +DL +Y LF RV
Sbjct: 415 LITYLDQTTQKSLIATVEKQLLGEHLTAILQ---KGLNNLLDENRIQDLSLLYQLFSRVR 471
Query: 241 SGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQ 300
G+ + + +++ G +V +PE KD VQ LLD KDK D+II F ++ F
Sbjct: 472 GGVQVLLQQWIEYIKAFGSTIVINPE--KDKT-MVQELLDFKDKVDHIIDICFLKNEKFI 528
Query: 301 NALNSSFEYFINLNPRSP-EFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKD 359
NA+ +FE FIN P P E I+ +VD KLR G K ++E++E +LDK+M++FR++ KD
Sbjct: 529 NAMKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKD 588
Query: 360 VFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHE 419
VFE +YK+ LAKRLL GK+ S DAE+S++ KLK ECG FTSKLEGMF DM+ S+D M +
Sbjct: 589 VFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQ 648
Query: 420 F--YASHPELGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRL 477
F Y + + + L V +LT G WPT + +LP EM L E F+++YLG H+GR+L
Sbjct: 649 FKQYMQNQNVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKL 708
Query: 478 SWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
WQ+ +G +KA F +G+K EL VS +Q VL++FN + S +
Sbjct: 709 QWQSTLGHCVLKAEFKEGKK-ELQVSLFQTLVLLMFNEGEEFSLE 752
>UNIPROTKB|Q13620 [details] [associations]
symbol:CUL4B "Cullin-4B" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IEA]
[GO:0045750 "positive regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007049
"cell cycle" evidence=NAS] [GO:0031465 "Cul4B-RING ubiquitin ligase
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005634 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0007049
GO:GO:0006511 EMBL:CH471107 GO:GO:0045732 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159 SUPFAM:SSF74788
PDB:4A0C PDBsum:4A0C KO:K10609 HOVERGEN:HBG003619 OrthoDB:EOG42FSH0
EMBL:AY365125 EMBL:AF212995 EMBL:AK123688 EMBL:AK299081
EMBL:AK315037 EMBL:BX537787 EMBL:AC002476 EMBL:AL451005
EMBL:BC036216 EMBL:AB014595 EMBL:U58091 IPI:IPI00179057
IPI:IPI00480142 IPI:IPI00965290 RefSeq:NP_001073341.1
RefSeq:NP_003579.3 UniGene:Hs.102914 PDB:2DO7 PDB:4A0L PDB:4A64
PDBsum:2DO7 PDBsum:4A0L PDBsum:4A64 ProteinModelPortal:Q13620
SMR:Q13620 DIP:DIP-31609N IntAct:Q13620 STRING:Q13620
PhosphoSite:Q13620 DMDM:296439468 PaxDb:Q13620 PRIDE:Q13620
DNASU:8450 Ensembl:ENST00000371322 Ensembl:ENST00000404115
GeneID:8450 KEGG:hsa:8450 UCSC:uc004esv.3 UCSC:uc004esw.3 CTD:8450
GeneCards:GC0XM119658 H-InvDB:HIX0017025 HGNC:HGNC:2555
HPA:CAB017786 HPA:HPA011880 MIM:300304 MIM:300354
neXtProt:NX_Q13620 Orphanet:85293 PharmGKB:PA27051 OMA:FEDSLDF
EvolutionaryTrace:Q13620 GenomeRNAi:8450 NextBio:31618
PMAP-CutDB:Q13620 ArrayExpress:Q13620 Bgee:Q13620 CleanEx:HS_CUL4B
Genevestigator:Q13620 GermOnline:ENSG00000158290 GO:GO:0031465
Uniprot:Q13620
Length = 913
Score = 993 (354.6 bits), Expect = 4.4e-100, P = 4.4e-100
Identities = 209/525 (39%), Positives = 322/525 (61%)
Query: 4 HKFGEKLYSGLVSTMTLHLK-EISKSIE-AAQGGSFLEELNRKWNDHNKALQMIRDILMY 61
+K LY L H+K +I + E + FL++++R W +H + + MIR I ++
Sbjct: 250 YKISANLYKQLRQICEDHIKAQIHQFREDSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLF 309
Query: 62 MDRTYIPSTHKTP-VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR 120
+DRTY+ P + ++GL L+R +I+ K+Q + ++ +L L+ RER GE I+R L+R
Sbjct: 310 LDRTYVLQNSMLPSIWDMGLELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLR 369
Query: 121 NIIKMLMDLGPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMER 180
+++ ML DL +YQ+ FE+ FLE + Y E QK ++ + EYL +RL EE +R
Sbjct: 370 SLLSMLSDL--QIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADR 427
Query: 181 VTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVP 240
+ YLD ++ + VEK+++ H+ ++ GL N+L +++ +DL +Y LF RV
Sbjct: 428 LITYLDQTTQKSLIATVEKQLLGEHLTAILQ---KGLNNLLDENRIQDLSLLYQLFSRVR 484
Query: 241 SGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQ 300
G+ + + +++ G +V +PE KD VQ LLD KDK D+II F ++ F
Sbjct: 485 GGVQVLLQQWIEYIKAFGSTIVINPE--KDKT-MVQELLDFKDKVDHIIDICFLKNEKFI 541
Query: 301 NALNSSFEYFINLNPRSP-EFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKD 359
NA+ +FE FIN P P E I+ +VD KLR G K ++E++E +LDK+M++FR++ KD
Sbjct: 542 NAMKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKD 601
Query: 360 VFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHE 419
VFE +YK+ LAKRLL GK+ S DAE+S++ KLK ECG FTSKLEGMF DM+ S+D M +
Sbjct: 602 VFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQ 661
Query: 420 F--YASHPELGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRL 477
F Y + + + L V +LT G WPT + +LP EM L E F+++YLG H+GR+L
Sbjct: 662 FKQYMQNQNVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKL 721
Query: 478 SWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
WQ+ +G +KA F +G+K EL VS +Q VL++FN + S +
Sbjct: 722 QWQSTLGHCVLKAEFKEGKK-ELQVSLFQTLVLLMFNEGEEFSLE 765
>UNIPROTKB|F1P2U1 [details] [associations]
symbol:CUL4A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin ligase complex"
evidence=IEA] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IEA] [GO:0051246 "regulation of
protein metabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0031464
OMA:KVSATLY GO:GO:0051246 EMBL:AADN02017929 EMBL:AADN02017930
EMBL:AADN02017931 IPI:IPI00587191 Ensembl:ENSGALT00000027171
Uniprot:F1P2U1
Length = 741
Score = 992 (354.3 bits), Expect = 5.6e-100, P = 5.6e-100
Identities = 202/490 (41%), Positives = 310/490 (63%)
Query: 37 FLEELNRKWNDHNKALQMIRDILMYMDRTYIPSTHKTP-VHELGLNLWRDNIVRSNKIQT 95
FL+++N+ W DH + + MIR I +++DRTY+ P + ++GL L+R++++ ++Q
Sbjct: 113 FLKKINKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRNHVISDKQVQN 172
Query: 96 RLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLGPSVYQEDFEKPFLEVSAEFYKVESQ 155
+ ++ +L L+ RER+GE ++R L+R+++ ML DL VY+E FE+ FLE + Y E Q
Sbjct: 173 KTIDGILLLIERERSGEAVDRSLLRSLLSMLSDL--QVYKESFEQRFLEETNCLYAAEGQ 230
Query: 156 KFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNS 215
+ ++ + EYL +RL EE +RV YLD ++ + VEK+++ H+ ++
Sbjct: 231 RLMQEREVPEYLHHVSKRLEEEGDRVITYLDHSTQKPLIACVEKQLLGEHLTAILQ---K 287
Query: 216 GLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFV 275
GL N+L +++ DL + Y LF RV G + + + +++ G +V +PE+ KD V
Sbjct: 288 GLDNLLDENRISDLTQTYQLFSRVKGGQQILLQHWSEYIKNFGTTIVVNPEKDKD---MV 344
Query: 276 QRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEYFINLNPRSP-EFISLFVDDKLRKGLK 334
Q LLD KDK D+II F ++ F N + SFE FIN P P E I+ +VD KLR G K
Sbjct: 345 QELLDFKDKVDHIIEVCFQKNEKFINLMKESFETFINKRPNKPAELIAKYVDSKLRAGNK 404
Query: 335 GVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTE 394
++E++E ILDK+M++FR++ KDVFE +YK+ LAKRLL GK+ S DAE+S++ KLK E
Sbjct: 405 EATDEELERILDKIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHE 464
Query: 395 CGYQFTSKLEGMFTDMKTSQDTMHEF--YASHPELGDSRTLVVQVLTTGSWPTQPSVTCN 452
CG FTSKLEGMF DM+ S+D M +F Y + + L V +LT G WPT + +
Sbjct: 465 CGAAFTSKLEGMFKDMELSKDVMVQFKQYMQNQSDPGNIDLTVNILTMGYWPTYTPMEVH 524
Query: 453 LPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLML 512
L +EM L E F+++YLG H+GR+L WQT +G A +KA F +G+K E VS +Q VL++
Sbjct: 525 LNSEMIKLQEVFKTFYLGKHSGRKLQWQTTLGHAVLKAEFKEGKK-EFQVSLFQTLVLLM 583
Query: 513 FNNADRLSYQ 522
FN D S++
Sbjct: 584 FNEGDEFSFE 593
>ZFIN|ZDB-GENE-040426-1357 [details] [associations]
symbol:cul4a "cullin 4A" species:7955 "Danio
rerio" [GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0071600 "otic vesicle morphogenesis"
evidence=IMP] [GO:0035118 "embryonic pectoral fin morphogenesis"
evidence=IMP] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS50069 SMART:SM00182 ZFIN:ZDB-GENE-040426-1357
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GO:GO:0035118 KO:K10609 HOVERGEN:HBG003619 CTD:8451 GO:GO:0071600
EMBL:BC054607 IPI:IPI00487530 RefSeq:NP_957321.1 UniGene:Dr.84245
ProteinModelPortal:Q7T2C1 SMR:Q7T2C1 STRING:Q7T2C1 GeneID:394002
KEGG:dre:394002 NextBio:20814969 Uniprot:Q7T2C1
Length = 635
Score = 992 (354.3 bits), Expect = 5.6e-100, P = 5.6e-100
Identities = 213/525 (40%), Positives = 317/525 (60%)
Query: 4 HKFGEKLYSGLVSTMTLHLK-EISKSIEAAQGG-SFLEELNRKWNDHNKALQMIRDILMY 61
+K LY L H++ +I + E + SFL+ +NR W DH + MIR I ++
Sbjct: 81 YKVSPMLYKQLRQVCEEHVQAQIHQFREESLDSLSFLKRMNRCWQDHCRQTIMIRSIFLF 140
Query: 62 MDRTYIPSTHKTP-VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR 120
+DRTY+ P + + GL L+R +IV +Q+R + +LE V RER+GE ++R L+R
Sbjct: 141 LDRTYVLQNSLLPSIWDTGLELFRTHIVSDAAVQSRTVQGILEQVERERSGETVDRSLLR 200
Query: 121 NIIKMLMDLGPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMER 180
+++ ML DL VY++ FE+ FL + Y E Q+ ++ D EYL RRL EE +R
Sbjct: 201 SLLGMLSDL--QVYKDSFEQRFLSETTRLYAAEGQRLMQERDVPEYLHHVARRLEEENDR 258
Query: 181 VTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVP 240
V YLD ++ + VEK+++ HM ++ GL +L +++ +L +Y LF +V
Sbjct: 259 VISYLDQSTQKPLIATVEKQLLGEHMTTILQ---KGLRTLLDENRVCELTLLYELFSKVK 315
Query: 241 SGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQ 300
GL + + +++ G + V PER + E VQ LLD KD+ D++ S F +++F
Sbjct: 316 GGLTALLQSWREYIKSVGAETVCSPERDR---EMVQELLDFKDQMDSVTQSCFQRNESFI 372
Query: 301 NALNSSFEYFINLNPRSP-EFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKD 359
NA+ +FE FIN P P E I+ +VD KLR G K +EE++E ILDK+M++FR++ KD
Sbjct: 373 NAMKEAFENFINQRPNKPAELIAKYVDSKLRAGNKEATEEELERILDKIMIIFRFIHGKD 432
Query: 360 VFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHE 419
VFE +YK+ LAKRLL GK+ S DAE+S++ KLK ECG FTSKLEGMF DM+ S+D M +
Sbjct: 433 VFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQ 492
Query: 420 F--YASHPELGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRL 477
F Y + + L V +LT G WP+ + +LPAEM L E F+ +YLG H+GR+L
Sbjct: 493 FKQYMQNQTEPSNIELTVNILTMGYWPSYTPMDVHLPAEMVKLQEVFKLFYLGKHSGRKL 552
Query: 478 SWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
WQ +G A +K F +G+K EL VS +Q VL++FN +D S +
Sbjct: 553 QWQPTLGHAVLKTEFKEGKK-ELQVSLFQTLVLLMFNESDECSVE 596
>UNIPROTKB|E2RMN1 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:FEDSLDF EMBL:AAEX03026836
Ensembl:ENSCAFT00000029435 Uniprot:E2RMN1
Length = 982
Score = 990 (353.6 bits), Expect = 9.1e-100, P = 9.1e-100
Identities = 208/525 (39%), Positives = 322/525 (61%)
Query: 4 HKFGEKLYSGLVSTMTLHLK-EISKSIE-AAQGGSFLEELNRKWNDHNKALQMIRDILMY 61
+K LY L H+K +I + E + FL+++++ W +H + + MIR I ++
Sbjct: 319 YKISANLYKQLRQICEDHIKAQIHQFREDSLDSVLFLKKIDKCWQNHCRQMIMIRSIFLF 378
Query: 62 MDRTYIPSTHKTP-VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR 120
+DRTY+ P + ++GL L+R +I+ K+Q + ++ +L L+ RER GE I+R L+R
Sbjct: 379 LDRTYVLQNSMLPSIWDMGLELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLR 438
Query: 121 NIIKMLMDLGPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMER 180
+++ ML DL +YQ+ FE+ FLE + Y E QK ++ + EYL +RL EE +R
Sbjct: 439 SLLSMLSDL--QIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADR 496
Query: 181 VTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVP 240
+ YLD ++ + VEK+++ H+ ++ GL N+L +++ +DL +Y LF RV
Sbjct: 497 LITYLDQTTQKSLIATVEKQLLGEHLTAILQ---KGLNNLLDENRIQDLSLLYQLFSRVR 553
Query: 241 SGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQ 300
G+ + + +++ G +V +PE KD VQ LLD KDK D+II F ++ F
Sbjct: 554 GGVQVLLQQWIEYIKAFGSTIVINPE--KDKT-MVQELLDFKDKVDHIIDICFLKNEKFI 610
Query: 301 NALNSSFEYFINLNPRSP-EFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKD 359
NA+ +FE FIN P P E I+ +VD KLR G K ++E++E +LDK+M++FR++ KD
Sbjct: 611 NAMKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKD 670
Query: 360 VFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHE 419
VFE +YK+ LAKRLL GK+ S DAE+S++ KLK ECG FTSKLEGMF DM+ S+D M +
Sbjct: 671 VFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQ 730
Query: 420 F--YASHPELGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRL 477
F Y + + + L V +LT G WPT + +LP EM L E F+++YLG H+GR+L
Sbjct: 731 FKQYMQNQNVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKL 790
Query: 478 SWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
WQ+ +G +KA F +G+K EL VS +Q VL++FN + S +
Sbjct: 791 QWQSTLGHCVLKAEFKEGKK-ELQVSLFQTLVLLMFNEGEEFSLE 834
>UNIPROTKB|E1BQK9 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0031465 "Cul4B-RING ubiquitin
ligase complex" evidence=IEA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IEA] [GO:0045750 "positive
regulation of S phase of mitotic cell cycle" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 GO:GO:0045732 SUPFAM:SSF75632
GO:GO:0045750 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:FEDSLDF GO:GO:0031465
EMBL:AADN02013619 IPI:IPI00584907 Ensembl:ENSGALT00000013942
Uniprot:E1BQK9
Length = 884
Score = 986 (352.1 bits), Expect = 2.4e-99, P = 2.4e-99
Identities = 207/526 (39%), Positives = 321/526 (61%)
Query: 4 HKFGEKLYSGLVSTMTLHLK-EISKSIE-AAQGGSFLEELNRKWNDHNKALQMIRDILMY 61
+K LY L H+K +I + E + FL+++++ W DH + + MIR I ++
Sbjct: 220 YKISANLYKQLRQICEDHIKAQIHQFREDSLDSVLFLKKIDKCWQDHCRQMIMIRSIFLF 279
Query: 62 MDRTYIPSTHKTP-VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR 120
+DRTY+ P + ++GL L+R +I+ K+Q + ++ +L L+ RER GE I+R L+R
Sbjct: 280 LDRTYVLQNSMLPSIWDMGLELFRTHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLR 339
Query: 121 NIIKMLMDLGPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMER 180
+++ ML DL +YQ+ FE FLE + Y E Q+ ++ + EYL +RL EE +R
Sbjct: 340 SLLSMLSDL--QIYQDSFEHRFLEETNRLYAAEGQRLMQEREVPEYLHHVNKRLEEEADR 397
Query: 181 VTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVP 240
+ YLD ++ + VEK+++ H+ ++ GL ++L +++ +DL +Y LF RV
Sbjct: 398 IITYLDQSTQKPLIATVEKQLLGEHLTAILQ---KGLNHLLDENRIQDLSLLYQLFSRVR 454
Query: 241 SGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQ 300
G+ + + +++ G +V +PE KD VQ LLD KDK D+II F ++ F
Sbjct: 455 GGVQVLLQHWIEYIKAFGSTIVINPE--KDKT-MVQELLDFKDKVDHIIDVCFLKNEKFV 511
Query: 301 NALNSSFEYFINLNPRSP-EFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKD 359
NA+ +FE FIN P P E I+ +VD KLR G K ++E++E +LDK+M++FR++ KD
Sbjct: 512 NAMKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKD 571
Query: 360 VFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHE 419
VFE +YK+ LAKRLL GK+ S DAE+S++ KLK ECG FTSKLEGMF DM+ S+D M +
Sbjct: 572 VFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQ 631
Query: 420 F---YASHPELGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRR 476
F Y + + + L V +LT G WPT + +LP EM L E F+++YLG H+GR+
Sbjct: 632 FKQQYMQNQNVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRK 691
Query: 477 LSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
L WQ+ +G +KA F +G+K EL VS +Q VL++FN + S +
Sbjct: 692 LQWQSTLGHCVLKAEFKEGKK-ELQVSLFQTLVLLMFNEGEEFSLE 736
>UNIPROTKB|F1Q284 [details] [associations]
symbol:CUL4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K10609 CTD:8451 OMA:KVSATLY
EMBL:AAEX03013408 RefSeq:XP_849542.3 Ensembl:ENSCAFT00000010211
GeneID:607683 KEGG:cfa:607683 Uniprot:F1Q284
Length = 761
Score = 985 (351.8 bits), Expect = 3.1e-99, P = 3.1e-99
Identities = 211/525 (40%), Positives = 320/525 (60%)
Query: 4 HKFGEKLYSGLVSTMTLHLK-EISKSIE-AAQGGSFLEELNRKWNDHNKALQMIRDILMY 61
HK LY L H++ +I + E + FL+++N W DH + + MIR I ++
Sbjct: 98 HKVSPTLYKQLRQVCEDHVQAQILQFREDSLDSVLFLKKINTCWQDHCRQMIMIRSIFLF 157
Query: 62 MDRTYIPSTHKTP-VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR 120
+DRTY+ P + ++GL L+R++I+ +Q++ ++ +L L+ RER GE ++R L+R
Sbjct: 158 LDRTYVLQNSMLPSIWDMGLELFRNHIISDKMVQSKSIDGILLLIERERNGEAVDRSLLR 217
Query: 121 NIIKMLMDLGPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMER 180
+++ ML DL VY++ FE FLE + Y E Q+ ++ + EYL +RL EE +R
Sbjct: 218 SLLSMLSDL--QVYKDSFELKFLEETNCLYAAEGQRLMQEREVPEYLNHVSKRLEEEGDR 275
Query: 181 VTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVP 240
V YLD ++ + VEK+++ H+ ++H GL ++L +++ DL +MY LF RV
Sbjct: 276 VITYLDHSTQKPLIACVEKQLLGEHLTAILH---KGLDHLLDENRVPDLTQMYQLFSRVK 332
Query: 241 SGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQ 300
G + + + +++ G +V +PE+ KD VQ LLD KD+ D++I F ++ F
Sbjct: 333 GGQQILLQHWSEYIKTFGTTIVINPEKDKD---MVQDLLDFKDRVDHVIEVCFQRNEKFI 389
Query: 301 NALNSSFEYFINLNPRSP-EFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKD 359
N + SFE FIN P P E I+ VD KLR G K ++E++E ILDKVM++FR++ KD
Sbjct: 390 NLMKESFETFINKRPNKPAELIAKHVDSKLRAGNKEATDEELERILDKVMIIFRFIHGKD 449
Query: 360 VFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHE 419
VFE +YK+ LAKRLL GK+ S DAE+S++ KLK ECG FTSKLEGMF DM+ S+D M +
Sbjct: 450 VFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVQ 509
Query: 420 F--YASHPELGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRL 477
F Y + S L V +LT G WPT + +L EM L E F+++YLG H+GR+L
Sbjct: 510 FKQYMQNQSDPGSIDLTVNILTMGYWPTYTPMEVHLTPEMIKLQEVFKTFYLGKHSGRKL 569
Query: 478 SWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
WQT +G A +KA F +G+K E VS +Q VL++FN D S++
Sbjct: 570 QWQTTLGHAVLKAEFKEGKK-EFQVSLFQTLVLLMFNEGDGFSFE 613
>MGI|MGI:1914487 [details] [associations]
symbol:Cul4a "cullin 4A" species:10090 "Mus musculus"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IMP]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0031461
"cullin-RING ubiquitin ligase complex" evidence=IEA] [GO:0031464
"Cul4A-RING ubiquitin ligase complex" evidence=ISO] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0045750 "positive regulation of S phase of mitotic cell cycle"
evidence=IMP] [GO:0051246 "regulation of protein metabolic process"
evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 MGI:MGI:1914487 GO:GO:0019048 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511
GO:GO:0045732 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0045750
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176712 KO:K10609 GO:GO:0031464 HOVERGEN:HBG003619
CTD:8451 EMBL:AK168215 EMBL:AK170722 EMBL:BC010211 IPI:IPI00321407
RefSeq:NP_666319.2 UniGene:Mm.212861 ProteinModelPortal:Q3TCH7
SMR:Q3TCH7 STRING:Q3TCH7 PhosphoSite:Q3TCH7 PaxDb:Q3TCH7
PRIDE:Q3TCH7 Ensembl:ENSMUST00000016680 GeneID:99375 KEGG:mmu:99375
UCSC:uc009kww.2 InParanoid:Q3TCH7 OMA:DREVPEY OrthoDB:EOG42FSH0
ChiTaRS:CUL4A NextBio:353901 Bgee:Q3TCH7 CleanEx:MM_CUL4A
Genevestigator:Q3TCH7 GermOnline:ENSMUSG00000031446 Uniprot:Q3TCH7
Length = 759
Score = 981 (350.4 bits), Expect = 8.2e-99, P = 8.2e-99
Identities = 209/525 (39%), Positives = 318/525 (60%)
Query: 4 HKFGEKLYSGLVSTMTLHLK-EISKSIE-AAQGGSFLEELNRKWNDHNKALQMIRDILMY 61
HK LY L H++ +I E + FL+++N W DH + + MIR I ++
Sbjct: 96 HKVSPTLYKQLRQVCEDHVQAQILPFREDSLDSVLFLKKINTCWQDHCRQMIMIRSIFLF 155
Query: 62 MDRTYIPSTHKTP-VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR 120
+DRTY+ P + ++GL L+R++I+ +Q++ ++ +L L+ RER+GE ++R L+R
Sbjct: 156 LDRTYVLQNSMLPSIWDMGLELFRNHIISDRMVQSKTIDGILLLIGRERSGEAVDRSLLR 215
Query: 121 NIIKMLMDLGPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMER 180
+++ ML DL VY++ FE FLE + Y E Q+ ++ + EYL +RL EE +R
Sbjct: 216 SLLSMLSDL--QVYKDSFELKFLEETNCLYAAEGQRLMQDREVPEYLNHVSKRLEEEADR 273
Query: 181 VTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVP 240
V YLD ++ + VEK+++ H+ ++ GL ++L +++ DL +MY LF RV
Sbjct: 274 VITYLDHSTQKPLIACVEKQLLGEHLTAILQ---KGLEHLLDENRVPDLTQMYQLFSRVK 330
Query: 241 SGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQ 300
G + + + +++ G +V +PE+ KD VQ LLD KDK D+++ F ++ F
Sbjct: 331 GGQHALLQHWSEYIKTFGTTIVINPEKDKD---MVQDLLDFKDKVDHVVEVCFQRNERFI 387
Query: 301 NALNSSFEYFINLNPRSP-EFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKD 359
N + SFE FIN P P E I+ VD KLR G K ++E++E ILDK+M+LFR++ KD
Sbjct: 388 NLMKESFETFINKRPNKPAELIAKHVDSKLRAGNKEATDEELERILDKIMILFRFIHGKD 447
Query: 360 VFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHE 419
VFE +YK+ LAKRLL GK+ S DAE+S++ KLK ECG FTSKLEGMF DM+ S+D M
Sbjct: 448 VFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVH 507
Query: 420 F--YASHPELGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRL 477
F + + L V +LT G WPT + +LP EM L E F+++YLG H+GR+L
Sbjct: 508 FKQHMQNQSAPGPIDLTVNILTMGYWPTYTPMEVHLPPEMVRLQEVFKTFYLGKHSGRKL 567
Query: 478 SWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
WQT +G A +KA F +G+K E VS +Q VL++FN D S++
Sbjct: 568 QWQTTLGHAVLKADFKEGKK-EFQVSLFQTLVLLMFNEGDGFSFE 611
>UNIPROTKB|F1N3S4 [details] [associations]
symbol:CUL4A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051246 "regulation of protein metabolic process"
evidence=IEA] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0031464
OMA:KVSATLY GO:GO:0051246 EMBL:DAAA02034947 IPI:IPI00699975
Ensembl:ENSBTAT00000026769 Uniprot:F1N3S4
Length = 720
Score = 977 (349.0 bits), Expect = 2.2e-98, P = 2.2e-98
Identities = 208/504 (41%), Positives = 310/504 (61%)
Query: 37 FLEELNRKWNDHNKALQMIRDILMYMDRTYIPSTHKTP-VHELGLNLWRDNIVRSNKIQT 95
FL+++N W DH + + MIR I +++DRTY+ P + ++GL L+R++I+ +QT
Sbjct: 92 FLKKMNTCWQDHCRQMIMIRSIFLFLDRTYVLQNSTLPSIWDMGLELFRNHIISDKMVQT 151
Query: 96 RLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLGPSVYQEDFEKPFLEVSAEFYKVESQ 155
+ ++ +L L+ RER+GE ++R L+R+++ ML DL VY++ FE FLE + Y E Q
Sbjct: 152 KTIDGILLLIERERSGEAVDRSLLRSLLGMLSDL--QVYKDSFELKFLEETNCLYAAEGQ 209
Query: 156 KFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNS 215
+ ++ + EYL +RL EE +RV YLD ++ + VEK+++ H+ ++
Sbjct: 210 RLMQEREVPEYLDHVSKRLEEEADRVITYLDHSTQKPLIACVEKQLLGEHLTAILQ---K 266
Query: 216 GLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFV 275
GL ++L +++ DL +MY LF RV G + + + +++ G +V +PE+ KD V
Sbjct: 267 GLDHLLDENRVPDLTQMYQLFSRVRGGQQALLQHWSDYIKTFGTTIVINPEKDKD---MV 323
Query: 276 QRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEYFINLNPRSP-EFISLFVDDKLRKGLK 334
Q LLD KD+ D++I F + F N + SFE FIN P P E I+ VD KLR G K
Sbjct: 324 QDLLDFKDRVDHVIDVCFQRSEKFVNLMKESFETFINKRPNKPAELIAKHVDSKLRAGNK 383
Query: 335 GVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTE 394
++E++E +LDKVM+LFR++ KDVFE +YK+ LAKRLL GK+ S DAE+S++ KLK E
Sbjct: 384 EATDEELERMLDKVMILFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHE 443
Query: 395 CGYQFTSKLEGMFTDMKTSQDTMHEF--YASHPELGDSRTLVVQVLTTGSWPTQPSVTCN 452
CG FTSKLEGMF DM+ S+D M F Y + S L V +LT G WPT + +
Sbjct: 444 CGAAFTSKLEGMFKDMELSKDIMVHFKQYMQNQSDPGSIDLTVNILTMGYWPTYTPMEVH 503
Query: 453 LPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLML 512
L EM L E F+++YLG H+GR+L WQT +G A +KA F +G+K E VS +Q VL++
Sbjct: 504 LTPEMIKLQEVFKTFYLGKHSGRKLQWQTTLGHAVLKAEFKEGKK-EFQVSLFQTLVLLM 562
Query: 513 FNNADRLSYQGNR--AGNRDSCFR 534
FN D S++ R G DS R
Sbjct: 563 FNEGDGFSFEDIRMATGIEDSELR 586
>UNIPROTKB|F1RN43 [details] [associations]
symbol:CUL4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051246 "regulation of protein metabolic process"
evidence=IEA] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0031464
OMA:KVSATLY GO:GO:0051246 EMBL:FP236214 Ensembl:ENSSSCT00000010475
Uniprot:F1RN43
Length = 761
Score = 973 (347.6 bits), Expect = 5.8e-98, P = 5.8e-98
Identities = 211/539 (39%), Positives = 320/539 (59%)
Query: 4 HKFGEKLYSGLVSTMTLHLKE--ISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMY 61
HK LY L H++ + ++ FL+++N W DH + + M+R I ++
Sbjct: 98 HKVAPTLYQQLREACESHVQAQILQVCTDSLDSVFFLKKINTCWQDHCRQMIMVRSIFLF 157
Query: 62 MDRTYIPSTHKTP-VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR 120
+DRTY+ P + ++GL L+R +++ +QT+ ++ +L L+ RER+GE ++R L+R
Sbjct: 158 LDRTYVLQNSLLPSIWDMGLELFRSHVISDRMVQTKTIDGILLLIARERSGEAVDRSLLR 217
Query: 121 NIIKMLMDLGPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMER 180
++ ML DL VY++ FE FLE + Y E Q+ ++ + EYL +RL EE +R
Sbjct: 218 GLLGMLSDL--QVYKDSFELKFLEETNCLYAAEGQRLMQEREVPEYLNHVSKRLEEEGDR 275
Query: 181 VTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVP 240
V YLD ++ + VEK+++ H+ ++ GL ++L +++ DL +MY LF RV
Sbjct: 276 VITYLDHSTQKPLIACVEKQLLGEHLTAILQ---KGLDHLLDENRVPDLTQMYQLFSRVR 332
Query: 241 SGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQ 300
G + + + +++ G +V +PE+ KD VQ LLD KD+ D++I F ++ F
Sbjct: 333 GGQQALLQHWSEYIKTFGTTIVINPEKDKD---MVQDLLDFKDRVDHVIDVCFQRNEKFI 389
Query: 301 NALNSSFEYFINLNPRSP-EFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKD 359
N + SFE FIN P P E I+ VD KLR G K ++E++E ILDKVM++FR++ KD
Sbjct: 390 NLMKESFEAFINKRPNKPAELIAKHVDSKLRAGNKEATDEELERILDKVMIIFRFIHGKD 449
Query: 360 VFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHE 419
VFE +YK+ LAKRLL GK+ S DAE+S++ KLK ECG FTSKLEGMF DM+ S+D M
Sbjct: 450 VFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVH 509
Query: 420 F--YASHPELGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRL 477
F Y + S L V +LT G WPT + +L EM L E F+++YLG H+GR+L
Sbjct: 510 FKQYMQNQSDPGSIDLTVNILTMGYWPTYTPMDVHLTPEMVKLQEVFKTFYLGKHSGRKL 569
Query: 478 SWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQGNRA--GNRDSCFR 534
WQT +G A +KA F +G+K E VS +Q VL++FN D ++ +A G DS R
Sbjct: 570 QWQTALGHAVLKAEFKEGKK-EFQVSLFQTLVLLMFNEGDGFGFEEIKAATGIEDSELR 627
>UNIPROTKB|Q13619 [details] [associations]
symbol:CUL4A "Cullin-4A" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0045750 "positive
regulation of S phase of mitotic cell cycle" evidence=IEA]
[GO:0051246 "regulation of protein metabolic process" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IDA] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=IDA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=TAS] [GO:0008285 "negative regulation
of cell proliferation" evidence=TAS] [GO:0097193 "intrinsic
apoptotic signaling pathway" evidence=TAS] [GO:0007050 "cell cycle
arrest" evidence=TAS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0019048 GO:GO:0008285 GO:GO:0000082
GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007050
GO:GO:0016567 GO:GO:0006511 GO:GO:0097193 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159 SUPFAM:SSF74788
KO:K10609 GO:GO:0031464 HOVERGEN:HBG003619 EMBL:AF077188
EMBL:AY365124 EMBL:AB178950 EMBL:AL136221 EMBL:BC008308
EMBL:AB012193 EMBL:U58090 IPI:IPI00419273 IPI:IPI00549919
RefSeq:NP_001008895.1 RefSeq:NP_003580.1 UniGene:Hs.339735 PDB:2HYE
PDB:4A0K PDBsum:2HYE PDBsum:4A0K ProteinModelPortal:Q13619
SMR:Q13619 DIP:DIP-31610N IntAct:Q13619 MINT:MINT-4532640
STRING:Q13619 PhosphoSite:Q13619 DMDM:108936013 PaxDb:Q13619
PRIDE:Q13619 DNASU:8451 Ensembl:ENST00000326335
Ensembl:ENST00000375440 Ensembl:ENST00000375441
Ensembl:ENST00000451881 GeneID:8451 KEGG:hsa:8451 UCSC:uc010agu.3
CTD:8451 GeneCards:GC13P113863 HGNC:HGNC:2554 MIM:603137
neXtProt:NX_Q13619 PharmGKB:PA27050 InParanoid:Q13619 OMA:KVSATLY
EvolutionaryTrace:Q13619 GenomeRNAi:8451 NextBio:31624
ArrayExpress:Q13619 Bgee:Q13619 CleanEx:HS_CUL4A
Genevestigator:Q13619 GermOnline:ENSG00000139842 GO:GO:0051246
Uniprot:Q13619
Length = 759
Score = 972 (347.2 bits), Expect = 7.4e-98, P = 7.4e-98
Identities = 210/525 (40%), Positives = 315/525 (60%)
Query: 4 HKFGEKLYSGLVSTMTLHLK-EISKSIE-AAQGGSFLEELNRKWNDHNKALQMIRDILMY 61
HK LY L H++ +I E + FL+++N W DH + + MIR I ++
Sbjct: 96 HKVSPMLYKQLRQACEDHVQAQILPFREDSLDSVLFLKKINTCWQDHCRQMIMIRSIFLF 155
Query: 62 MDRTYIPSTHKTP-VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR 120
+DRTY+ P + ++GL L+R +I+ +Q++ ++ +L L+ RER+GE ++R L+R
Sbjct: 156 LDRTYVLQNSTLPSIWDMGLELFRTHIISDKMVQSKTIDGILLLIERERSGEAVDRSLLR 215
Query: 121 NIIKMLMDLGPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMER 180
+++ ML DL VY++ FE FLE + Y E Q+ ++ + EYL +RL EE +R
Sbjct: 216 SLLGMLSDL--QVYKDSFELKFLEETNCLYAAEGQRLMQEREVPEYLNHVSKRLEEEGDR 273
Query: 181 VTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVP 240
V YLD ++ + VEK+++ H+ ++ GL ++L +++ DL +MY LF RV
Sbjct: 274 VITYLDHSTQKPLIACVEKQLLGEHLTAILQ---KGLDHLLDENRVPDLAQMYQLFSRVR 330
Query: 241 SGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQ 300
G + + + +++ G +V +PE+ KD VQ LLD KDK D++I F ++ F
Sbjct: 331 GGQQALLQHWSEYIKTFGTAIVINPEKDKD---MVQDLLDFKDKVDHVIEVCFQKNERFV 387
Query: 301 NALNSSFEYFINLNPRSP-EFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKD 359
N + SFE FIN P P E I+ VD KLR G K ++E++E LDK+M+LFR++ KD
Sbjct: 388 NLMKESFETFINKRPNKPAELIAKHVDSKLRAGNKEATDEELERTLDKIMILFRFIHGKD 447
Query: 360 VFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHE 419
VFE +YK+ LAKRLL GK+ S DAE+S++ KLK ECG FTSKLEGMF DM+ S+D M
Sbjct: 448 VFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVH 507
Query: 420 FYASHPELGDSRT--LVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRL 477
F DS L V +LT G WPT + +L EM L E F+++YLG H+GR+L
Sbjct: 508 FKQHMQNQSDSGPIDLTVNILTMGYWPTYTPMEVHLTPEMIKLQEVFKAFYLGKHSGRKL 567
Query: 478 SWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
WQT +G A +KA F +G+K E VS +Q VL++FN D S++
Sbjct: 568 QWQTTLGHAVLKAEFKEGKK-EFQVSLFQTLVLLMFNEGDGFSFE 611
>FB|FBgn0033260 [details] [associations]
symbol:Cul-4 "Cullin-4" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0051533 "positive regulation of NFAT protein
import into nucleus" evidence=IMP] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0007307 "eggshell chorion gene
amplification" evidence=IDA] [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IGI] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:AE013599 GO:GO:0007095 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0051533 GO:GO:0006511 GO:GO:0004842
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0007307 GeneTree:ENSGT00550000074299
KO:K10609 OMA:FEDSLDF CTD:35780 EMBL:BT021374 EMBL:BT050475
RefSeq:NP_001163084.1 RefSeq:NP_610352.2 UniGene:Dm.4527 SMR:Q5BI50
IntAct:Q5BI50 STRING:Q5BI50 EnsemblMetazoa:FBtr0088821
EnsemblMetazoa:FBtr0301355 GeneID:35780 KEGG:dme:Dmel_CG8711
UCSC:CG8711-RA FlyBase:FBgn0033260 InParanoid:Q5BI50
OrthoDB:EOG4M0CGM GenomeRNAi:35780 NextBio:795178 Uniprot:Q5BI50
Length = 821
Score = 942 (336.7 bits), Expect = 1.1e-94, P = 1.1e-94
Identities = 209/536 (38%), Positives = 323/536 (60%)
Query: 1 MVLHKFGEKLYSGLVSTMTLHLKEISKSIEAAQGGSF-----LEELNRKWNDHNKALQMI 55
M HK +LY+ L H+K K ++ GGS LE++N W + + MI
Sbjct: 152 MCSHKMDAQLYAKLKELTEQHVKRNIK-LKELTGGSMDKLILLEKINHWWLSFCQQMIMI 210
Query: 56 RDILMYMDRTYIPSTHKTPVH---ELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGE 112
R I +YMDRTY+ + VH ++GL+L+R + +++ +Q R ++ LL L+ +ER G
Sbjct: 211 RSIFLYMDRTYV--LQNSTVHSIWDMGLDLFRIHFAQNSVVQKRTVDGLLTLIEKERQGS 268
Query: 113 VINRGLMRNIIKMLMDLGPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAER 172
++RGL++++++ML DL +Y FE+ FL+ + + YK ESQ+ ++ + EYL+ +
Sbjct: 269 TVDRGLLKSLVRMLCDL--QIYTSSFEEKFLDATNQLYKAESQRKMQELEVPEYLQHVNK 326
Query: 173 RLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRM 232
RL EE ER+ HYLD+ ++ + VEKE++A H+ ++ GL ++L D++ DL +
Sbjct: 327 RLAEENERLRHYLDSSTKHPLIYNVEKELLAEHLTSILQ---KGLDSLLEDNRLSDLTLL 383
Query: 233 YNLFRRVPSGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSA 292
Y L RV +G + +++ G+ +V DPE+ K VQ LLD KDK D I+ +
Sbjct: 384 YGLLSRVKNGTSELCGNFNGFIKKKGRTIVIDPEKDKS---MVQDLLDFKDKMDVIVRTC 440
Query: 293 FNNDKTFQNALNSSFEYFINLNPRSP-EFISLFVDDKLRKGLKGVSEEDVETILDKVMML 351
F +++ F N+L +FE+FIN P E I+ +VD KLR G KG ++E++E LDK+M+L
Sbjct: 441 FEHNEKFTNSLREAFEFFINQRANKPAELIAKYVDMKLRSGNKGTTDEELEKTLDKIMVL 500
Query: 352 FRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMK 411
FR++ KDVFE +YK+ LAKRLL GK+ S D+E+S++ KLK ECG FTSKLEGMF DM+
Sbjct: 501 FRFIHGKDVFEAFYKKDLAKRLLVGKSASVDSEKSMLSKLKQECGGGFTSKLEGMFKDME 560
Query: 412 TSQDTMHEFYASHPELGDSRT-----LVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRS 466
S+D ++ + H L ++R L V +LT G WPT +P + + F
Sbjct: 561 LSRD-INIAFRGHA-LSNNRDVHNLDLCVSILTMGYWPTYAPTEVTMPPQFINPQQIFNK 618
Query: 467 YYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
+YL H+GR+L WQ +G+ ++A F G K EL VS +Q VL+LFN+ LSY+
Sbjct: 619 FYLEKHSGRKLQWQPTLGNCMLRAQFDAGPK-ELLVSLFQALVLLLFNDKPVLSYE 673
>RGD|1564494 [details] [associations]
symbol:Cul4b "cullin 4B" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031465 "Cul4B-RING ubiquitin ligase complex" evidence=ISO]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=ISO] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
RGD:1564494 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
IPI:IPI00362333 PRIDE:D3ZNZ7 Ensembl:ENSRNOT00000003523
UCSC:RGD:1564494 ArrayExpress:D3ZNZ7 Uniprot:D3ZNZ7
Length = 754
Score = 699 (251.1 bits), Expect = 1.9e-89, Sum P(2) = 1.9e-89
Identities = 148/395 (37%), Positives = 239/395 (60%)
Query: 4 HKFGEKLYSGLVSTMTLHLKEISKSIEAAQGGS--FLEELNRKWNDHNKALQMIRDILMY 61
+K LY L H+K + + FL++++R W +H + + MIR I ++
Sbjct: 119 YKISANLYKQLRQICEDHIKAQIHQFKTGFKDTVLFLKKIDRCWQNHCRQMIMIRSIFLF 178
Query: 62 MDRTYIPSTHKTP-VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR 120
+DRTY+ P + ++GL L+R +I+ K+QT+ ++ +L L+ RER GE I+R L+R
Sbjct: 179 LDRTYVLQNSMLPSIWDMGLELFRAHIISDQKVQTKTIDGILLLIERERNGEAIDRSLLR 238
Query: 121 NIIKMLMDLGPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMER 180
+++ ML DL +YQ+ FE+ FL+ + Y E QK ++ + EYL +RL EE +R
Sbjct: 239 SLLNMLSDL--QIYQDSFEQRFLQETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADR 296
Query: 181 VTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVP 240
+ YLD ++ + VEK+++ H+ ++ GL ++L +++ +DL +Y LF RV
Sbjct: 297 LITYLDQTTQKSLIASVEKQLLGEHLTAILQ---KGLNSLLDENRIQDLSLLYQLFSRVR 353
Query: 241 SGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQ 300
G+ + + +++ G +V +PE KD VQ LLD KDK D+II + F ++ F
Sbjct: 354 GGVQVLLQHWIEYIKAFGSTIVINPE--KDKT-MVQELLDFKDKVDHIIDTCFLKNEKFI 410
Query: 301 NALNSSFEYFINLNPRSP-EFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKD 359
NA+ +FE FIN P P E I+ +VD KLR G K ++E++E +LDK+M++FR++ KD
Sbjct: 411 NAMKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKD 470
Query: 360 VFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTE 394
VFE +YK+ LAKRLL GK+ S DAE+S++ KLK E
Sbjct: 471 VFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHE 505
Score = 213 (80.0 bits), Expect = 1.9e-89, Sum P(2) = 1.9e-89
Identities = 43/105 (40%), Positives = 64/105 (60%)
Query: 418 HEFYASHPELGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRL 477
HE Y + + + L V +LT G WPT + +LP EM L E F+++YLG H+GR+L
Sbjct: 504 HE-YMQNQNVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKL 562
Query: 478 SWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
WQ+ +G +KA F +G+K EL VS +Q VL++FN + S +
Sbjct: 563 QWQSTLGHCVLKAEFKEGKK-ELQVSLFQTLVLLMFNEGEEFSLE 606
>DICTYBASE|DDB_G0292794 [details] [associations]
symbol:culD "cullin D" species:44689 "Dictyostelium
discoideum" [GO:0005634 "nucleus" evidence=IDA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0031461
"cullin-RING ubiquitin ligase complex" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
dictyBase:DDB_G0292794 GO:GO:0005634 GenomeReviews:CM000155_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 EMBL:AAFI02000196
InterPro:IPR016159 SUPFAM:SSF74788 KO:K10609 HSSP:Q9JLV5
OMA:FEDSLDF RefSeq:XP_629469.1 ProteinModelPortal:Q54CS2 SMR:Q54CS2
STRING:Q54CS2 EnsemblProtists:DDB0266743 GeneID:8628859
KEGG:ddi:DDB_G0292794 ProtClustDB:CLSZ2429365 Uniprot:Q54CS2
Length = 802
Score = 871 (311.7 bits), Expect = 3.7e-87, P = 3.7e-87
Identities = 186/484 (38%), Positives = 295/484 (60%)
Query: 37 FLEELNRKWNDHNKALQMIRDILMYMDRTYIPSTHKT--PVHELGLNLWRDNIVRSNKIQ 94
FL+ +N W DH + MIR I +Y+DRTY+ T + +LGL + +N+ + + ++
Sbjct: 141 FLKSINSIWKDHTNQMIMIRSIFLYLDRTYVIQNSNTVKSIWDLGLFYFGNNLSQQSNLE 200
Query: 95 TRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLGPSVYQEDFEKPFLEVSAEFYKVES 154
+ +++LL + ER G+ I+R L+ +++KML L ++Y + FE F++ + FY +E
Sbjct: 201 RKTIDSLLYSIRCEREGDEIDRDLIHSLVKMLSSL--NIYTK-FEIEFIKETNRFYDMEG 257
Query: 155 QKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDN 214
I + YLK RLN+E ER+ YL+ ++ ++ V+++++I H+ ++
Sbjct: 258 NSKINEIETPMYLKYVCERLNQEGERLMRYLEQSTKKQLMAVLDRQLIERHVDVILEKGF 317
Query: 215 SGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREVMTSHLRETGKQLVTDPERLKDPVEF 274
+ +VN D+ EDLG++Y L V + I+E S++++TG Q++ D E+
Sbjct: 318 NAMVN---GDRLEDLGKLYQLLNSVGE-IKKIKESWQSYIKQTGIQMLNDKEK---EATL 370
Query: 275 VQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEYFINLNPRSP-EFISLFVDDKLRKGL 333
+Q LLD KD+ D I+S +F+ ++ AL SFEYFIN P E ++ F+D KL+ G
Sbjct: 371 IQDLLDYKDRLDRILSQSFSKNELLTYALKESFEYFINTKQNKPAELVARFIDSKLKVGG 430
Query: 334 KGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKT 393
K +SEE++ET+L+K ++LFRY+Q KDVFE +YKQ L+KRLL K+ S DAE+S+I KLKT
Sbjct: 431 KRMSEEELETVLNKSLILFRYIQGKDVFEAFYKQDLSKRLLLDKSTSIDAEKSMISKLKT 490
Query: 394 ECGYQFTSKLEGMFTDMKTSQDTMHEFYASHPELGDSRTLV--VQVLTTGSWPTQPSVTC 451
ECG FT+KLE MF D++ S D M+ F S P + +++ + VLT+G+WP QP +
Sbjct: 491 ECGTTFTAKLEEMFKDIELSNDIMNSFRDS-PMTQNFKSIEMNIYVLTSGNWPIQPPIEA 549
Query: 452 NLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLM 511
LP E E F +YL H G+ L WQ + +KA F +G+K EL+VS +Q +L
Sbjct: 550 TLPKEFLEYQEVFNKFYLSKHNGKTLKWQNALSYCVLKANFIQGKK-ELSVSLFQTIILY 608
Query: 512 LFNN 515
LFN+
Sbjct: 609 LFND 612
>ASPGD|ASPL0000014731 [details] [associations]
symbol:culC species:162425 "Emericella nidulans"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0016874
Gene3D:1.10.10.10 InterPro:IPR011991 EMBL:BN001302 GO:GO:0006511
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
OMA:ATFYGPI EnsemblFungi:CADANIAT00004755 Uniprot:C8V637
Length = 823
Score = 486 (176.1 bits), Expect = 1.4e-76, Sum P(2) = 1.4e-76
Identities = 100/234 (42%), Positives = 148/234 (63%)
Query: 272 VEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRK 331
+++V +L K K+D I AF +D+ Q+A+ +SF F+N PRS EF+SLF D+ L+K
Sbjct: 398 IKWVDDILALKKKFDGIWKDAFGSDQVLQSAITASFSSFLNSTPRSSEFLSLFFDENLKK 457
Query: 332 GLKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKL 391
G+KG ++ +V+ +L+ + L RY+++KD FE YYK+HL++RLL +++S DAER +I K+
Sbjct: 458 GVKGKTDNEVDALLENGITLLRYIKDKDRFEAYYKKHLSRRLLMKRSMSMDAERQMISKM 517
Query: 392 KTECGYQFTSKLEGMFTDMKTSQDTMHEFYASHPELGD---SR-TLVVQVLTTGSWPT-- 445
K E G QFT +LE MF DM S+D + E GD R L + VLT+ WP
Sbjct: 518 KMEVGNQFTQRLEAMFRDMTISEDLTASYKQFVREQGDPDKKRFELDINVLTSTMWPMEI 577
Query: 446 -------QPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATF 492
Q + C +P E+ + + F +YL H+GR+LSWQ +MG+ADIKATF
Sbjct: 578 MSSSRDGQVELPCIIPKEVETVKQSFEKFYLDKHSGRKLSWQPSMGTADIKATF 631
Score = 317 (116.6 bits), Expect = 1.4e-76, Sum P(2) = 1.4e-76
Identities = 75/254 (29%), Positives = 135/254 (53%)
Query: 24 EISKSIEAAQGGS-FLEELNRKWNDHNKALQMIRDILMYMDRTYIPSTHKTPVHELGLNL 82
+ +++ E + G FL L+ W DH ++MI D+LMYMDR + + K ++ + L
Sbjct: 106 QFTEATERRETGERFLSALSEVWEDHQICMKMITDVLMYMDR--VVALRKVSIYAAAMAL 163
Query: 83 WRDNIVRS------NKIQTRLL-NTLLELVHRERTGEVINRGLMRNIIKMLMDL------ 129
+RD+++RS N + +L +T+L ++ ER+G +I+R L+ + IKML L
Sbjct: 164 FRDHVLRSPVSSSNNAVVADVLKSTVLFMIQLERSGHMIDRALIHSCIKMLEGLYETEAE 223
Query: 130 --GPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDA 187
+Y FE +LE SA FY+ E ++ +E D + R+ EE ER + +
Sbjct: 224 EESSKLYLTSFEPDYLEASAAFYRAEGKRLLETVDAATFCAVVSARIAEEKERCQYTISL 283
Query: 188 KSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIR 247
SE+KI +V+ E+I N++ +V+ + +G+ ML D+ ++L ++Y L RV +
Sbjct: 284 LSESKIKEIVDNELIRNNLAEVVNFEGTGVRVMLDHDRIDNLSKIYALSARVDPKKTHLT 343
Query: 248 EVMTSHLRETGKQL 261
+ + E G ++
Sbjct: 344 AAVQKRIVEMGNEI 357
Score = 212 (79.7 bits), Expect = 6.9e-43, Sum P(2) = 6.9e-43
Identities = 48/113 (42%), Positives = 69/113 (61%)
Query: 433 LVVQVLTTGSWPT---------QPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNM 483
L + VLT+ WP Q + C +P E+ + + F +YL H+GR+LSWQ +M
Sbjct: 563 LDINVLTSTMWPMEIMSSSRDGQVELPCIIPKEVETVKQSFEKFYLDKHSGRKLSWQPSM 622
Query: 484 GSADIKATF----GKGQKHELNVSTYQMCVLMLFNN---ADRLSYQGNRAGNR 529
G+ADIKATF GK Q+HELNVSTY M +L+LFN+ + L+++ +A R
Sbjct: 623 GTADIKATFHRSNGKVQRHELNVSTYAMFILLLFNDIPIGESLTFEEIQARTR 675
Score = 54 (24.1 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 56/257 (21%), Positives = 106/257 (41%)
Query: 130 GPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKS 189
G V ++FEK + ++S K+ ++ E E L + + +++R +
Sbjct: 15 GIPVSGDEFEKNWKDLSTSLKKIHTKDASELSF--EQLYRNAYSI-VKIQRAEDLYERTK 71
Query: 190 EAK---ITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTI 246
E + + V+K ++A PRL+ + V+M D++ + R S L
Sbjct: 72 ELEKEWLCGEVQKRVVAAITPRLLLAKEA--VDM--QDQFTEATERRETGERFLSAL--- 124
Query: 247 REVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKY----DNIISS--AFNNDKTFQ 300
EV H + +++TD D V ++++ D+++ S + +N+
Sbjct: 125 SEVWEDH--QICMKMITDVLMYMDRVVALRKVSIYAAAMALFRDHVLRSPVSSSNNAVVA 182
Query: 301 NALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMML-FR--YLQE 357
+ L S+ + I L RS I + K L+G+ E + E K+ + F YL+
Sbjct: 183 DVLKSTVLFMIQLE-RSGHMIDRALIHSCIKMLEGLYETEAEEESSKLYLTSFEPDYLEA 241
Query: 358 KDVFEKYYKQHLAKRLL 374
F Y+ KRLL
Sbjct: 242 SAAF---YRAE-GKRLL 254
Score = 43 (20.2 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 22/110 (20%), Positives = 46/110 (41%)
Query: 334 KGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSG----KTVSDDAERSLIV 389
K SE E + + + + +D++E+ + L K L G + V+ R L+
Sbjct: 40 KDASELSFEQLYRNAYSIVKIQRAEDLYER--TKELEKEWLCGEVQKRVVAAITPRLLLA 97
Query: 390 KLKTECGYQFTSKLEGMFTDMKTSQDTMHEFYASHPELGDSRTLVVQVLT 439
K + QFT E ++T F ++ E+ + + ++++T
Sbjct: 98 KEAVDMQDQFTEATE--------RRETGERFLSALSEVWEDHQICMKMIT 139
>POMBASE|SPAC24H6.03 [details] [associations]
symbol:cul3 "cullin 3" species:4896 "Schizosaccharomyces
pombe" [GO:0005829 "cytosol" evidence=IDA] [GO:0007346 "regulation
of mitotic cell cycle" evidence=IC] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=ISS] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IC]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
PomBase:SPAC24H6.03 GO:GO:0005829 GO:GO:0007346 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0019005 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0042787
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 KO:K03869
EMBL:AB017028 PIR:S62405 PIR:T38359 PIR:T43406 RefSeq:NP_592949.1
ProteinModelPortal:Q09760 IntAct:Q09760 STRING:Q09760
EnsemblFungi:SPAC24H6.03.1 GeneID:2542637 KEGG:spo:SPAC24H6.03
OMA:DEFRQHI OrthoDB:EOG48H0BR NextBio:20803686 Uniprot:Q09760
Length = 785
Score = 667 (239.9 bits), Expect = 8.6e-71, Sum P(2) = 8.6e-71
Identities = 148/404 (36%), Positives = 232/404 (57%)
Query: 132 SVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEA 191
++Y F FL + FY++ES I EYLKKAE+R EE ER +YL K +
Sbjct: 222 TLYDVLFAPKFLSYTRNFYEIESSTVIGVFGVVEYLKKAEKRFEEEKERSKNYLFTKIAS 281
Query: 192 KITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREVMT 251
+ +VVE E+++ H+ L+ ++G +M+ +E L +Y F RV G+ ++++ +
Sbjct: 282 PLLSVVEDELLSKHLDDLLENQSTGFFSMIDSSNFEGLQLVYESFSRVELGVKSLKKYLA 341
Query: 252 SHLRETGKQL-VTDPERLKDPVE-------------FVQRLLDEKDKYDNIISSAFNNDK 297
++ GK + T + L+ + +VQ++L D+ + IIS+ + D+
Sbjct: 342 KYVAHHGKLINETTSQALEGKMAVGRLSSNATMATLWVQKVLALWDRLNTIISTTMDADR 401
Query: 298 TFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQE 357
+ N+L+ +F F++ R+PE+ISLF+DD L+K + E +E L + LFR++ E
Sbjct: 402 SILNSLSDAFVTFVDGYTRAPEYISLFIDDNLKKDARKAIEGSIEATLQNSVTLFRFISE 461
Query: 358 KDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTM 417
KDVFEKYYK HLAKRLL+ +++S DAE +I +LK E G FT KLEGMF DM SQ+ +
Sbjct: 462 KDVFEKYYKTHLAKRLLNNRSISSDAELGMISRLKQEAGNVFTQKLEGMFNDMNLSQELL 521
Query: 418 HEFYASHPELGDSRT---LVVQVLTTGSWPTQPS---VTCNLPAEMSALCEKFRSYYLGT 471
E Y + L ++ L V +L + WP S + CN P + A ++F +YL
Sbjct: 522 QE-YKHNSALQSAKPALDLNVSILASTFWPIDLSPHKIKCNFPKVLLAQIDQFTDFYLSK 580
Query: 472 HTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNN 515
HTGR+L W +MGSAD++ F K +K++LNVST +L+LF +
Sbjct: 581 HTGRKLLWYPSMGSADVRVNF-KDRKYDLNVSTIASVILLLFQD 623
Score = 359 (131.4 bits), Expect = 1.8e-33, Sum P(3) = 1.8e-33
Identities = 84/241 (34%), Positives = 134/241 (55%)
Query: 26 SKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPSTHKTPVHELGLNLWRD 85
S+S+EAA FL L W DH ++QMI +L Y+D+ Y S K PV+E G+ ++R+
Sbjct: 112 SRSLEAAH--RFLSSLVNSWKDHIVSMQMISSVLKYLDKVYSKSADKVPVNENGIYIFRE 169
Query: 86 NIV-RSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLGPS------VYQEDF 138
++ S +I + + T+L LV+ ER G INR L+ + + ML L PS +Y F
Sbjct: 170 VVLLNSFEIGEKCVETILILVYLERKGNTINRPLINDCLDMLNSL-PSENKKETLYDVLF 228
Query: 139 EKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAKITNVVE 198
FL + FY++ES I EYLKKAE+R EE ER +YL K + + +VVE
Sbjct: 229 APKFLSYTRNFYEIESSTVIGVFGVVEYLKKAEKRFEEEKERSKNYLFTKIASPLLSVVE 288
Query: 199 KEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREVMTSHLRETG 258
E+++ H+ L+ ++G +M+ +E L +Y F RV G+ ++++ + ++ G
Sbjct: 289 DELLSKHLDDLLENQSTGFFSMIDSSNFEGLQLVYESFSRVELGVKSLKKYLAKYVAHHG 348
Query: 259 K 259
K
Sbjct: 349 K 349
Score = 68 (29.0 bits), Expect = 8.6e-71, Sum P(2) = 8.6e-71
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 1 MVLHKFGEKLYSGLVSTMTLHLKE-----ISKSIEAAQGGSFLEELNRKWND 47
+VLHK+GEKLY+ + + LKE I K+ +A+ G+ L ++ RK ND
Sbjct: 56 LVLHKYGEKLYNHVQDVIRSRLKEETVPAIYKNYDASLLGNALLDI-RK-ND 105
Score = 40 (19.1 bits), Expect = 1.8e-33, Sum P(3) = 1.8e-33
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 340 DVETILDKVMMLFRYLQEKD--VFEK 363
+V TI +++LF+ L+E +FE+
Sbjct: 609 NVSTIASVILLLFQDLKENQCLIFEE 634
>UNIPROTKB|F1RUC1 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
Pfam:PF00888 PROSITE:PS50069 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 EMBL:CU693400
Ensembl:ENSSSCT00000013782 OMA:SSTERED Uniprot:F1RUC1
Length = 700
Score = 704 (252.9 bits), Expect = 1.8e-69, P = 1.8e-69
Identities = 150/393 (38%), Positives = 239/393 (60%)
Query: 4 HKFGEKLYSGLVSTMTLHLK-EISKSIE-AAQGGSFLEELNRKWNDHNKALQMIRDILMY 61
+K LY L H+K +I + E + FL++++R W +H + + MIR I ++
Sbjct: 303 YKISANLYKQLRQICEDHIKAQIHQFREYSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLF 362
Query: 62 MDRTYIPSTHKTP-VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR 120
+DRTY+ P + ++GL L+R +I+ K+Q + ++ +L L+ RER GE I+R L+R
Sbjct: 363 LDRTYVLQNSMLPSIWDMGLELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLR 422
Query: 121 NIIKMLMDLGPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMER 180
+++ ML DL +YQ+ FE+ FLE + Y E QK ++ + EYL +RL EE +R
Sbjct: 423 SLLSMLSDL--QIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADR 480
Query: 181 VTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVP 240
+ YLD ++ + VEK+++ H+ ++ GL N+L +++ +DL +Y LF RV
Sbjct: 481 LITYLDQTTQKSLIATVEKQLLGEHLTAILQ---KGLNNLLDENRIQDLSLLYQLFSRVR 537
Query: 241 SGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQ 300
G+ + + +++ G +V +PE KD VQ LLD KDK D+II F ++ F
Sbjct: 538 GGVQVLLQQWIEYIKAFGSTIVINPE--KDKT-MVQELLDFKDKVDHIIDICFLKNEKFI 594
Query: 301 NALNSSFEYFINLNPRSP-EFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKD 359
NA+ +FE FIN P P E I+ +VD KLR G K ++E++E +LDK+M++FR++ KD
Sbjct: 595 NAMKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKD 654
Query: 360 VFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLK 392
VFE +YK+ LAKRLL GK+ S DAE+S++ KLK
Sbjct: 655 VFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLK 687
>ASPGD|ASPL0000060435 [details] [associations]
symbol:culA species:162425 "Emericella nidulans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069 SMART:SM00182
SMART:SM00884 EMBL:BN001308 GO:GO:0016874 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176713 OMA:SGVINCY
EnsemblFungi:CADANIAT00001628 Uniprot:C8VU45
Length = 764
Score = 661 (237.7 bits), Expect = 4.7e-68, Sum P(2) = 4.7e-68
Identities = 157/471 (33%), Positives = 260/471 (55%)
Query: 83 WRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLG-----PS----- 132
W+++ K+ +++ +L+LV ++R GE I + +++I+ + LG P+
Sbjct: 155 WKEDFFL--KVHEKVMGAVLKLVEKQRNGETIEQSRIKSIVDSFVSLGLDETDPTKSTLE 212
Query: 133 VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAK 192
+Y+ F++PFLE + +Y+ ES++F+ EY+KKAE RL EE RV YL+
Sbjct: 213 IYRYYFQRPFLEATRIYYEDESRQFVADNSVVEYMKKAEIRLEEEKARVGLYLNNDISKD 272
Query: 193 ITNVVEKEMIANHMPRLVHMDNSGLVNMLLD-DKYEDLGRMYNLFRRVPSGLLTIREVMT 251
+T+ ++ H L D LLD ++ +DL RMY L R+ GL +R
Sbjct: 273 LTSTCLDVLVTAHSELL--RDE---FQPLLDNERQDDLARMYRLLSRIKDGLDPLRTKFE 327
Query: 252 SHLRETGKQLVTDPERLKDPVE---FVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFE 308
+H+R G V D E +V LL +Y +++ AFN + F +L+++
Sbjct: 328 AHVRRAGLSAVEKVAAEGDSFEPKMYVDALLSVHTRYHSLVKEAFNGESEFVRSLDNACR 387
Query: 309 YFINLNP-------RSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVF 361
F+N N ++PE ++ + D L++G K E ++E +L ++M +F+Y+++KDVF
Sbjct: 388 EFVNRNKICKSGSTKTPELLAKYTDSLLKRGSKAAEESELEEMLVQIMTVFKYIEDKDVF 447
Query: 362 EKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEFY 421
+K+Y + LAKRL+ +VSDDAE S+I KLK CG+++T+KL+ MF D++ S+D ++ Y
Sbjct: 448 QKFYSKMLAKRLVHVSSVSDDAETSMISKLKEACGFEYTNKLQRMFQDIQISKD-LNSSY 506
Query: 422 ASHPELG----DSRTLVV----QVLTTGSWP-TQPSVTCNLPAEMSALCEKFRSYYLGTH 472
E D R +V Q+L TG WP T PS + P E+ E+F+ +Y H
Sbjct: 507 KDWLEKSFLDDDDRKKLVDSHFQILGTGFWPLTAPSTSFLAPPEIVKTSERFQKFYCDKH 566
Query: 473 TGRRLSWQTNMGSADIKATFGKGQK--HELNVSTYQMCVLMLFNNADRLSY 521
GR+L+W + ++KA + K K + VSTYQM +L+LFN +D L+Y
Sbjct: 567 NGRKLTWLWQLCKGELKANYIKNTKVPYTFLVSTYQMGILLLFNESDTLTY 617
Score = 316 (116.3 bits), Expect = 2.8e-25, P = 2.8e-25
Identities = 90/331 (27%), Positives = 159/331 (48%)
Query: 4 HKFGEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMD 63
H GE+LY L ++ HL+ + + L R+W + A + I + Y++
Sbjct: 70 HLLGEELYRKLGEYLSRHLEWVHGESMGHTDEALLSFYIREWQRYTTAAKYINHLFRYLN 129
Query: 64 RTYIP---STHKTPVHEL---GLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRG 117
R ++ K V+++ L W+++ K+ +++ +L+LV ++R GE I +
Sbjct: 130 RHWVKREIDEGKKNVYDVYTQHLVKWKEDFFL--KVHEKVMGAVLKLVEKQRNGETIEQS 187
Query: 118 LMRNIIKMLMDLG-----PS-----VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYL 167
+++I+ + LG P+ +Y+ F++PFLE + +Y+ ES++F+ EY+
Sbjct: 188 RIKSIVDSFVSLGLDETDPTKSTLEIYRYYFQRPFLEATRIYYEDESRQFVADNSVVEYM 247
Query: 168 KKAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLD-DKY 226
KKAE RL EE RV YL+ +T+ ++ H L D LLD ++
Sbjct: 248 KKAEIRLEEEKARVGLYLNNDISKDLTSTCLDVLVTAHSELL--RDE---FQPLLDNERQ 302
Query: 227 EDLGRMYNLFRRVPSGLLTIREVMTSHLRETGKQLVTDPERLKDPVE---FVQRLLDEKD 283
+DL RMY L R+ GL +R +H+R G V D E +V LL
Sbjct: 303 DDLARMYRLLSRIKDGLDPLRTKFEAHVRRAGLSAVEKVAAEGDSFEPKMYVDALLSVHT 362
Query: 284 KYDNIISSAFNNDKTFQNALNSSFEYFINLN 314
+Y +++ AFN + F +L+++ F+N N
Sbjct: 363 RYHSLVKEAFNGESEFVRSLDNACREFVNRN 393
Score = 48 (22.0 bits), Expect = 4.7e-68, Sum P(2) = 4.7e-68
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 10 LYSGLVSTMTLHLKEISKSIEAAQGGSFL-EELNRKWNDH 48
LY+ + + T H ++I+A +G L EEL RK ++
Sbjct: 44 LYTAVHNFCTSHKAVSGQAIQAQRGAHLLGEELYRKLGEY 83
>UNIPROTKB|F1MYD0 [details] [associations]
symbol:CUL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
GO:GO:0006915 GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0009887 GO:GO:0006511 GO:GO:0019005 SUPFAM:SSF75632
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K03347 OMA:SGVINCY CTD:8454
EMBL:DAAA02011928 IPI:IPI01002552 RefSeq:NP_001180162.1
UniGene:Bt.6490 ProteinModelPortal:F1MYD0
Ensembl:ENSBTAT00000011513 GeneID:407228 KEGG:bta:407228
NextBio:20818478 Uniprot:F1MYD0
Length = 776
Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
Identities = 151/408 (37%), Positives = 237/408 (58%)
Query: 130 GPS--VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDA 187
GP+ VY+E FE FL + FY ES +F++ EY+KKAE RL EE RV YL
Sbjct: 222 GPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHE 281
Query: 188 KSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIR 247
++ ++ E+ +I H+ + H + N+L DK EDLGRMYNL R+ GL ++
Sbjct: 282 STQDELARKCEQVLIEKHL-EIFHTE---FQNLLDADKNEDLGRMYNLVSRIQDGLGELK 337
Query: 248 EVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNS 305
+++ +H+ G + L DP +VQ +LD KY+ ++ SAFNND F AL+
Sbjct: 338 KLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDK 397
Query: 306 SFEYFINLNP---------RSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQ 356
+ FIN N +SPE ++ + D L+K K E ++E L++VM++F+Y++
Sbjct: 398 ACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIE 457
Query: 357 EKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDT 416
+KDVF+K+Y + LAKRL+ + SDDAE S+I KLK CG+++TSKL+ MF D+ S+D
Sbjct: 458 DKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKD- 516
Query: 417 MHEFYASHPELGDSRTL--VVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTG 474
++E + H + L +QVL++GSWP Q S T LP+E+ ++F ++Y H+G
Sbjct: 517 LNEQFKKHLTNSEPLDLDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSG 576
Query: 475 RRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
R+L+W + ++ K ++ L ST+QM +L+ +N D + Q
Sbjct: 577 RKLTWLYQLSKGELVTNCFKN-RYTLQASTFQMAILLQYNTEDAYAVQ 623
Score = 396 (144.5 bits), Expect = 4.6e-35, P = 4.6e-35
Identities = 104/328 (31%), Positives = 170/328 (51%)
Query: 7 GEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTY 66
G +LY L + +L + K E S L+ ++W D+ + +++ I Y++R +
Sbjct: 85 GLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHW 144
Query: 67 IP---STHKTPVHE---LGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR 120
+ + ++E L L WRD + R + ++ N +L+L+ +ER GE IN L+
Sbjct: 145 VRRECDEGRKGIYEIYSLALVTWRDCLFRP--LNKQVTNAVLKLIEKERNGETINTRLIS 202
Query: 121 NIIKMLMDLG----------PS--VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLK 168
+++ ++LG P+ VY+E FE FL + FY ES +F++ EY+K
Sbjct: 203 GVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMK 262
Query: 169 KAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYED 228
KAE RL EE RV YL ++ ++ E+ +I H+ + H + N+L DK ED
Sbjct: 263 KAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHL-EIFHTE---FQNLLDADKNED 318
Query: 229 LGRMYNLFRRVPSGLLTIREVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYD 286
LGRMYNL R+ GL +++++ +H+ G + L DP +VQ +LD KY+
Sbjct: 319 LGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYN 378
Query: 287 NIISSAFNNDKTFQNALNSSFEYFINLN 314
++ SAFNND F AL+ + FIN N
Sbjct: 379 ALVMSAFNNDAGFVAALDKACGRFINNN 406
>UNIPROTKB|E2R1V2 [details] [associations]
symbol:CUL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K03347 OMA:SGVINCY CTD:8454
EMBL:AAEX03010158 EMBL:AAEX03010159 RefSeq:XP_848402.1
ProteinModelPortal:E2R1V2 Ensembl:ENSCAFT00000005562 GeneID:475512
KEGG:cfa:475512 Uniprot:E2R1V2
Length = 776
Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
Identities = 151/408 (37%), Positives = 237/408 (58%)
Query: 130 GPS--VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDA 187
GP+ VY+E FE FL + FY ES +F++ EY+KKAE RL EE RV YL
Sbjct: 222 GPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHE 281
Query: 188 KSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIR 247
++ ++ E+ +I H+ + H + N+L DK EDLGRMYNL R+ GL ++
Sbjct: 282 STQDELARKCEQVLIEKHL-EIFHTE---FQNLLDADKNEDLGRMYNLVSRIQDGLGELK 337
Query: 248 EVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNS 305
+++ +H+ G + L DP +VQ +LD KY+ ++ SAFNND F AL+
Sbjct: 338 KLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDK 397
Query: 306 SFEYFINLNP---------RSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQ 356
+ FIN N +SPE ++ + D L+K K E ++E L++VM++F+Y++
Sbjct: 398 ACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIE 457
Query: 357 EKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDT 416
+KDVF+K+Y + LAKRL+ + SDDAE S+I KLK CG+++TSKL+ MF D+ S+D
Sbjct: 458 DKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKD- 516
Query: 417 MHEFYASHPELGDSRTL--VVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTG 474
++E + H + L +QVL++GSWP Q S T LP+E+ ++F ++Y H+G
Sbjct: 517 LNEQFKKHLTNSEPLDLDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSG 576
Query: 475 RRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
R+L+W + ++ K ++ L ST+QM +L+ +N D + Q
Sbjct: 577 RKLTWLYQLSKGELVTNCFKN-RYTLQASTFQMAILLQYNTEDAYAVQ 623
Score = 396 (144.5 bits), Expect = 4.6e-35, P = 4.6e-35
Identities = 104/328 (31%), Positives = 170/328 (51%)
Query: 7 GEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTY 66
G +LY L + +L + K E S L+ ++W D+ + +++ I Y++R +
Sbjct: 85 GLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHW 144
Query: 67 IP---STHKTPVHE---LGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR 120
+ + ++E L L WRD + R + ++ N +L+L+ +ER GE IN L+
Sbjct: 145 VRRECDEGRKGIYEIYSLALVTWRDCLFRP--LNKQVTNAVLKLIEKERNGETINTRLIS 202
Query: 121 NIIKMLMDLG----------PS--VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLK 168
+++ ++LG P+ VY+E FE FL + FY ES +F++ EY+K
Sbjct: 203 GVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMK 262
Query: 169 KAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYED 228
KAE RL EE RV YL ++ ++ E+ +I H+ + H + N+L DK ED
Sbjct: 263 KAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHL-EIFHTE---FQNLLDADKNED 318
Query: 229 LGRMYNLFRRVPSGLLTIREVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYD 286
LGRMYNL R+ GL +++++ +H+ G + L DP +VQ +LD KY+
Sbjct: 319 LGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYN 378
Query: 287 NIISSAFNNDKTFQNALNSSFEYFINLN 314
++ SAFNND F AL+ + FIN N
Sbjct: 379 ALVMSAFNNDAGFVAALDKACGRFINNN 406
>UNIPROTKB|Q13616 [details] [associations]
symbol:CUL1 "Cullin-1" species:9606 "Homo sapiens"
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0006513
"protein monoubiquitination" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS;IDA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=ISS;IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0007050 "cell cycle arrest"
evidence=TAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0097193 "intrinsic apoptotic
signaling pathway" evidence=TAS] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IDA] [GO:0000080 "G1 phase of mitotic cell
cycle" evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0007219 "Notch signaling pathway" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0051437 "positive regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051439
"regulation of ubiquitin-protein ligase activity involved in
mitotic cell cycle" evidence=TAS] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_6900 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0008285 GO:GO:0005654 GO:GO:0000082
GO:GO:0008283 GO:GO:0007219 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0007050 GO:GO:0016567 GO:GO:0009887 GO:GO:0097193
GO:GO:0019005 GO:GO:0000084 eggNOG:COG5647 GO:GO:0031145
GO:GO:0051437 SUPFAM:SSF75632 EMBL:CH471146 GO:GO:0000080
Reactome:REACT_24941 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 PDB:1U6G PDBsum:1U6G GO:GO:0031146
HOGENOM:HOG000176713 KO:K03347 OMA:SGVINCY EMBL:U58087
EMBL:AF062536 EMBL:BX537409 EMBL:AC005229 EMBL:BC125119
EMBL:BC125120 IPI:IPI00014310 RefSeq:NP_003583.2 UniGene:Hs.146806
PDB:1LDJ PDB:1LDK PDB:3RTR PDB:3TDU PDB:3TDZ PDB:4F52 PDBsum:1LDJ
PDBsum:1LDK PDBsum:3RTR PDBsum:3TDU PDBsum:3TDZ PDBsum:4F52
ProteinModelPortal:Q13616 SMR:Q13616 DIP:DIP-17013N IntAct:Q13616
MINT:MINT-120495 STRING:Q13616 PhosphoSite:Q13616 DMDM:19863257
PaxDb:Q13616 PeptideAtlas:Q13616 PRIDE:Q13616 DNASU:8454
Ensembl:ENST00000325222 Ensembl:ENST00000409469 GeneID:8454
KEGG:hsa:8454 UCSC:uc003wey.3 CTD:8454 GeneCards:GC07P148395
HGNC:HGNC:2551 HPA:CAB002676 MIM:603134 neXtProt:NX_Q13616
PharmGKB:PA27047 HOVERGEN:HBG106177 InParanoid:Q13616
OrthoDB:EOG4WH8K4 PhylomeDB:Q13616 ChiTaRS:CUL1
EvolutionaryTrace:Q13616 GenomeRNAi:8454 NextBio:31638
ArrayExpress:Q13616 Bgee:Q13616 CleanEx:HS_CUL1
Genevestigator:Q13616 GermOnline:ENSG00000055130 Uniprot:Q13616
Length = 776
Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
Identities = 151/408 (37%), Positives = 237/408 (58%)
Query: 130 GPS--VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDA 187
GP+ VY+E FE FL + FY ES +F++ EY+KKAE RL EE RV YL
Sbjct: 222 GPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHE 281
Query: 188 KSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIR 247
++ ++ E+ +I H+ + H + N+L DK EDLGRMYNL R+ GL ++
Sbjct: 282 STQDELARKCEQVLIEKHL-EIFHTE---FQNLLDADKNEDLGRMYNLVSRIQDGLGELK 337
Query: 248 EVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNS 305
+++ +H+ G + L DP +VQ +LD KY+ ++ SAFNND F AL+
Sbjct: 338 KLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDK 397
Query: 306 SFEYFINLNP---------RSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQ 356
+ FIN N +SPE ++ + D L+K K E ++E L++VM++F+Y++
Sbjct: 398 ACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIE 457
Query: 357 EKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDT 416
+KDVF+K+Y + LAKRL+ + SDDAE S+I KLK CG+++TSKL+ MF D+ S+D
Sbjct: 458 DKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKD- 516
Query: 417 MHEFYASHPELGDSRTL--VVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTG 474
++E + H + L +QVL++GSWP Q S T LP+E+ ++F ++Y H+G
Sbjct: 517 LNEQFKKHLTNSEPLDLDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSG 576
Query: 475 RRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
R+L+W + ++ K ++ L ST+QM +L+ +N D + Q
Sbjct: 577 RKLTWLYQLSKGELVTNCFKN-RYTLQASTFQMAILLQYNTEDAYTVQ 623
Score = 396 (144.5 bits), Expect = 4.6e-35, P = 4.6e-35
Identities = 104/328 (31%), Positives = 170/328 (51%)
Query: 7 GEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTY 66
G +LY L + +L + K E S L+ ++W D+ + +++ I Y++R +
Sbjct: 85 GLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHW 144
Query: 67 IP---STHKTPVHE---LGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR 120
+ + ++E L L WRD + R + ++ N +L+L+ +ER GE IN L+
Sbjct: 145 VRRECDEGRKGIYEIYSLALVTWRDCLFRP--LNKQVTNAVLKLIEKERNGETINTRLIS 202
Query: 121 NIIKMLMDLG----------PS--VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLK 168
+++ ++LG P+ VY+E FE FL + FY ES +F++ EY+K
Sbjct: 203 GVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMK 262
Query: 169 KAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYED 228
KAE RL EE RV YL ++ ++ E+ +I H+ + H + N+L DK ED
Sbjct: 263 KAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHL-EIFHTE---FQNLLDADKNED 318
Query: 229 LGRMYNLFRRVPSGLLTIREVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYD 286
LGRMYNL R+ GL +++++ +H+ G + L DP +VQ +LD KY+
Sbjct: 319 LGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYN 378
Query: 287 NIISSAFNNDKTFQNALNSSFEYFINLN 314
++ SAFNND F AL+ + FIN N
Sbjct: 379 ALVMSAFNNDAGFVAALDKACGRFINNN 406
>UNIPROTKB|Q5R4G6 [details] [associations]
symbol:CUL1 "Cullin-1" species:9601 "Pongo abelii"
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0006915
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009887
GO:GO:0019005 SUPFAM:SSF75632 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0031146 GeneTree:ENSGT00550000074299
KO:K03347 OMA:SGVINCY CTD:8454 HOVERGEN:HBG106177 EMBL:CR861282
RefSeq:NP_001126972.1 UniGene:Pab.18495 ProteinModelPortal:Q5R4G6
SMR:Q5R4G6 PRIDE:Q5R4G6 Ensembl:ENSPPYT00000021153 GeneID:100173991
KEGG:pon:100173991 InParanoid:Q5R4G6 Uniprot:Q5R4G6
Length = 776
Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
Identities = 151/408 (37%), Positives = 237/408 (58%)
Query: 130 GPS--VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDA 187
GP+ VY+E FE FL + FY ES +F++ EY+KKAE RL EE RV YL
Sbjct: 222 GPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHE 281
Query: 188 KSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIR 247
++ ++ E+ +I H+ + H + N+L DK EDLGRMYNL R+ GL ++
Sbjct: 282 STQDELARKCEQVLIEKHL-EIFHTE---FQNLLDADKNEDLGRMYNLVSRIQDGLGELK 337
Query: 248 EVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNS 305
+++ +H+ G + L DP +VQ +LD KY+ ++ SAFNND F AL+
Sbjct: 338 KLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDK 397
Query: 306 SFEYFINLNP---------RSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQ 356
+ FIN N +SPE ++ + D L+K K E ++E L++VM++F+Y++
Sbjct: 398 ACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIE 457
Query: 357 EKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDT 416
+KDVF+K+Y + LAKRL+ + SDDAE S+I KLK CG+++TSKL+ MF D+ S+D
Sbjct: 458 DKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKD- 516
Query: 417 MHEFYASHPELGDSRTL--VVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTG 474
++E + H + L +QVL++GSWP Q S T LP+E+ ++F ++Y H+G
Sbjct: 517 LNEQFKKHLTNSEPLDLDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSG 576
Query: 475 RRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
R+L+W + ++ K ++ L ST+QM +L+ +N D + Q
Sbjct: 577 RKLTWLYQLSKGELVTNCFKN-RYTLQASTFQMAILLQYNTEDAYTVQ 623
Score = 396 (144.5 bits), Expect = 4.6e-35, P = 4.6e-35
Identities = 104/328 (31%), Positives = 170/328 (51%)
Query: 7 GEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTY 66
G +LY L + +L + K E S L+ ++W D+ + +++ I Y++R +
Sbjct: 85 GLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHW 144
Query: 67 IP---STHKTPVHE---LGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR 120
+ + ++E L L WRD + R + ++ N +L+L+ +ER GE IN L+
Sbjct: 145 VRRECDEGRKGIYEIYSLALVTWRDCLFRP--LNKQVTNAVLKLIEKERNGETINTRLIS 202
Query: 121 NIIKMLMDLG----------PS--VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLK 168
+++ ++LG P+ VY+E FE FL + FY ES +F++ EY+K
Sbjct: 203 GVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMK 262
Query: 169 KAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYED 228
KAE RL EE RV YL ++ ++ E+ +I H+ + H + N+L DK ED
Sbjct: 263 KAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHL-EIFHTE---FQNLLDADKNED 318
Query: 229 LGRMYNLFRRVPSGLLTIREVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYD 286
LGRMYNL R+ GL +++++ +H+ G + L DP +VQ +LD KY+
Sbjct: 319 LGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYN 378
Query: 287 NIISSAFNNDKTFQNALNSSFEYFINLN 314
++ SAFNND F AL+ + FIN N
Sbjct: 379 ALVMSAFNNDAGFVAALDKACGRFINNN 406
>MGI|MGI:1349658 [details] [associations]
symbol:Cul1 "cullin 1" species:10090 "Mus musculus"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IC]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0006513 "protein monoubiquitination" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0009887 "organ morphogenesis" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=ISO;IC] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO;IDA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO;IDA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 MGI:MGI:1349658 GO:GO:0006915 GO:GO:0019048
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009887
GO:GO:0019005 GO:GO:0004842 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0031146
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713 KO:K03347
OMA:SGVINCY CTD:8454 HOVERGEN:HBG106177 OrthoDB:EOG4WH8K4
ChiTaRS:CUL1 EMBL:AF083216 EMBL:AF176910 EMBL:AF136441
EMBL:BC029260 IPI:IPI00124047 RefSeq:NP_036172.1 UniGene:Mm.87611
ProteinModelPortal:Q9WTX6 SMR:Q9WTX6 DIP:DIP-39799N IntAct:Q9WTX6
STRING:Q9WTX6 PhosphoSite:Q9WTX6 PaxDb:Q9WTX6 PRIDE:Q9WTX6
Ensembl:ENSMUST00000031697 GeneID:26965 KEGG:mmu:26965
UCSC:uc009bsz.1 InParanoid:Q9WTX6 NextBio:304903 Bgee:Q9WTX6
CleanEx:MM_CUL1 Genevestigator:Q9WTX6 GermOnline:ENSMUSG00000029686
Uniprot:Q9WTX6
Length = 776
Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
Identities = 151/408 (37%), Positives = 237/408 (58%)
Query: 130 GPS--VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDA 187
GP+ VY+E FE FL + FY ES +F++ EY+KKAE RL EE RV YL
Sbjct: 222 GPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHE 281
Query: 188 KSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIR 247
++ ++ E+ +I H+ + H + N+L DK EDLGRMYNL R+ GL ++
Sbjct: 282 STQDELARKCEQVLIEKHL-EIFHTE---FQNLLDADKNEDLGRMYNLVSRIQDGLGELK 337
Query: 248 EVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNS 305
+++ +H+ G + L DP +VQ +LD KY+ ++ SAFNND F AL+
Sbjct: 338 KLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDK 397
Query: 306 SFEYFINLNP---------RSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQ 356
+ FIN N +SPE ++ + D L+K K E ++E L++VM++F+Y++
Sbjct: 398 ACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIE 457
Query: 357 EKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDT 416
+KDVF+K+Y + LAKRL+ + SDDAE S+I KLK CG+++TSKL+ MF D+ S+D
Sbjct: 458 DKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKD- 516
Query: 417 MHEFYASHPELGDSRTL--VVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTG 474
++E + H + L +QVL++GSWP Q S T LP+E+ ++F ++Y H+G
Sbjct: 517 LNEQFKKHLTNSEPLDLDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSG 576
Query: 475 RRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
R+L+W + ++ K ++ L ST+QM +L+ +N D + Q
Sbjct: 577 RKLTWLYQLSKGELVTNCFKN-RYTLQASTFQMAILLQYNTEDAYTVQ 623
Score = 396 (144.5 bits), Expect = 4.6e-35, P = 4.6e-35
Identities = 104/328 (31%), Positives = 170/328 (51%)
Query: 7 GEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTY 66
G +LY L + +L + K E S L+ ++W D+ + +++ I Y++R +
Sbjct: 85 GLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHW 144
Query: 67 IP---STHKTPVHE---LGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR 120
+ + ++E L L WRD + R + ++ N +L+L+ +ER GE IN L+
Sbjct: 145 VRRECDEGRKGIYEIYSLALVTWRDCLFRP--LNKQVTNAVLKLIEKERNGETINTRLIS 202
Query: 121 NIIKMLMDLG----------PS--VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLK 168
+++ ++LG P+ VY+E FE FL + FY ES +F++ EY+K
Sbjct: 203 GVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMK 262
Query: 169 KAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYED 228
KAE RL EE RV YL ++ ++ E+ +I H+ + H + N+L DK ED
Sbjct: 263 KAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHL-EIFHTE---FQNLLDADKNED 318
Query: 229 LGRMYNLFRRVPSGLLTIREVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYD 286
LGRMYNL R+ GL +++++ +H+ G + L DP +VQ +LD KY+
Sbjct: 319 LGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYN 378
Query: 287 NIISSAFNNDKTFQNALNSSFEYFINLN 314
++ SAFNND F AL+ + FIN N
Sbjct: 379 ALVMSAFNNDAGFVAALDKACGRFINNN 406
>RGD|1308157 [details] [associations]
symbol:Cul1 "cullin 1" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0006513 "protein
monoubiquitination" evidence=IEA;ISO] [GO:0006915 "apoptotic
process" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0008283 "cell proliferation" evidence=IEA;ISO]
[GO:0009887 "organ morphogenesis" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA;ISO] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
RGD:1308157 GO:GO:0006915 GO:GO:0008283 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0009887 GO:GO:0006511 GO:GO:0019005
EMBL:CH473959 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0006513
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176713 KO:K03347 OMA:SGVINCY CTD:8454
HOVERGEN:HBG106177 OrthoDB:EOG4WH8K4 EMBL:BC161932 IPI:IPI00358206
RefSeq:NP_001102097.1 UniGene:Rn.68078 SMR:B1WBY1 STRING:B1WBY1
Ensembl:ENSRNOT00000007620 GeneID:362356 KEGG:rno:362356
UCSC:RGD:1308157 NextBio:679624 Genevestigator:B1WBY1
Uniprot:B1WBY1
Length = 776
Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
Identities = 151/408 (37%), Positives = 237/408 (58%)
Query: 130 GPS--VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDA 187
GP+ VY+E FE FL + FY ES +F++ EY+KKAE RL EE RV YL
Sbjct: 222 GPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHE 281
Query: 188 KSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIR 247
++ ++ E+ +I H+ + H + N+L DK EDLGRMYNL R+ GL ++
Sbjct: 282 STQDELARKCEQVLIEKHL-EIFHTE---FQNLLDADKNEDLGRMYNLVSRIQDGLGELK 337
Query: 248 EVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNS 305
+++ +H+ G + L DP +VQ +LD KY+ ++ SAFNND F AL+
Sbjct: 338 KLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDK 397
Query: 306 SFEYFINLNP---------RSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQ 356
+ FIN N +SPE ++ + D L+K K E ++E L++VM++F+Y++
Sbjct: 398 ACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIE 457
Query: 357 EKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDT 416
+KDVF+K+Y + LAKRL+ + SDDAE S+I KLK CG+++TSKL+ MF D+ S+D
Sbjct: 458 DKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKD- 516
Query: 417 MHEFYASHPELGDSRTL--VVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTG 474
++E + H + L +QVL++GSWP Q S T LP+E+ ++F ++Y H+G
Sbjct: 517 LNEQFKKHLTNSEPLDLDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSG 576
Query: 475 RRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
R+L+W + ++ K ++ L ST+QM +L+ +N D + Q
Sbjct: 577 RKLTWLYQLSKGELVTNCFKN-RYTLQASTFQMAILLQYNTEDAYTVQ 623
Score = 396 (144.5 bits), Expect = 4.6e-35, P = 4.6e-35
Identities = 104/328 (31%), Positives = 170/328 (51%)
Query: 7 GEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTY 66
G +LY L + +L + K E S L+ ++W D+ + +++ I Y++R +
Sbjct: 85 GLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHW 144
Query: 67 IP---STHKTPVHE---LGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR 120
+ + ++E L L WRD + R + ++ N +L+L+ +ER GE IN L+
Sbjct: 145 VRRECDEGRKGIYEIYSLALVTWRDCLFRP--LNKQVTNAVLKLIEKERNGETINTRLIS 202
Query: 121 NIIKMLMDLG----------PS--VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLK 168
+++ ++LG P+ VY+E FE FL + FY ES +F++ EY+K
Sbjct: 203 GVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMK 262
Query: 169 KAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYED 228
KAE RL EE RV YL ++ ++ E+ +I H+ + H + N+L DK ED
Sbjct: 263 KAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHL-EIFHTE---FQNLLDADKNED 318
Query: 229 LGRMYNLFRRVPSGLLTIREVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYD 286
LGRMYNL R+ GL +++++ +H+ G + L DP +VQ +LD KY+
Sbjct: 319 LGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYN 378
Query: 287 NIISSAFNNDKTFQNALNSSFEYFINLN 314
++ SAFNND F AL+ + FIN N
Sbjct: 379 ALVMSAFNNDAGFVAALDKACGRFINNN 406
>UNIPROTKB|E1C0W8 [details] [associations]
symbol:CUL1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006513 "protein monoubiquitination"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0009887 "organ
morphogenesis" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0006915
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511
GO:GO:0019005 SUPFAM:SSF75632 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 OMA:SGVINCY
EMBL:AADN02027289 EMBL:AADN02027286 EMBL:AADN02027287
EMBL:AADN02027288 IPI:IPI00590577 Ensembl:ENSGALT00000020252
Uniprot:E1C0W8
Length = 777
Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
Identities = 151/408 (37%), Positives = 237/408 (58%)
Query: 130 GPS--VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDA 187
GP+ VY+E FE FL + FY ES +F++ EY+KKAE RL EE RV YL
Sbjct: 223 GPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHE 282
Query: 188 KSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIR 247
++ ++ E+ +I H+ + H + N+L DK EDLGRMYNL R+ GL ++
Sbjct: 283 STQDELARKCEQVLIEKHL-EIFHTE---FQNLLDADKNEDLGRMYNLVSRIQDGLGELK 338
Query: 248 EVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNS 305
+++ +H+ G + L DP +VQ +LD KY+ ++ SAFNND F AL+
Sbjct: 339 KLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDK 398
Query: 306 SFEYFINLNP---------RSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQ 356
+ FIN N +SPE ++ + D L+K K E ++E L++VM++F+Y++
Sbjct: 399 ACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIE 458
Query: 357 EKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDT 416
+KDVF+K+Y + LAKRL+ + SDDAE S+I KLK CG+++TSKL+ MF D+ S+D
Sbjct: 459 DKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKD- 517
Query: 417 MHEFYASHPELGDSRTL--VVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTG 474
++E + H + L +QVL++GSWP Q S T LP+E+ ++F ++Y H+G
Sbjct: 518 LNEQFKKHLTNSEPLDLDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSG 577
Query: 475 RRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
R+L+W + ++ K ++ L ST+QM +L+ +N D + Q
Sbjct: 578 RKLTWLYQLSKGELVTNCFKN-RYTLQASTFQMAILLQYNTEDAYTVQ 624
Score = 236 (88.1 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 91/335 (27%), Positives = 164/335 (48%)
Query: 7 GEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTY 66
G +LY L + +L + K E S L+ ++W D+ + +++ I Y++R +
Sbjct: 85 GLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHW 144
Query: 67 IP---STHKTPVHE---LGLNLWRDNIVRS-NK-IQTRLLNTLLELVHRERTGEVINRGL 118
+ + ++E L L WRD + R NK +Q + L L+ +++ ++++ +
Sbjct: 145 VRRECDEGRKGIYEIYSLALVTWRDCLFRPLNKQVQNKCL---LKKKKKKKAMRMLSQLI 201
Query: 119 MRNIIKMLMDLGPSVYQED-FEK-PFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNE 176
++ +++LG + ++D F K P L V E + ESQ F+ D + + +
Sbjct: 202 TFILLVFVVELG--LNEDDAFAKGPTLTVYKESF--ESQ-FL--ADTERFYTRESTEFLQ 254
Query: 177 EMERVTHYLDAKSEAKI------TNVVEKEMIANHMPR-----LV--HMD--NSGLVNML 221
+ VT Y+ K+EA++ V E + + R L+ H++ ++ N+L
Sbjct: 255 Q-NPVTEYMK-KAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHLEIFHTEFQNLL 312
Query: 222 LDDKYEDLGRMYNLFRRVPSGLLTIREVMTSHLRETGKQLVTD--PERLKDPVEFVQRLL 279
DK EDLGRMYNL R+ GL +++++ +H+ G + L DP +VQ +L
Sbjct: 313 DADKNEDLGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVL 372
Query: 280 DEKDKYDNIISSAFNNDKTFQNALNSSFEYFINLN 314
D KY+ ++ SAFNND F AL+ + FIN N
Sbjct: 373 DVHKKYNALVMSAFNNDAGFVAALDKACGRFINNN 407
>ZFIN|ZDB-GENE-030131-2603 [details] [associations]
symbol:cul1a "cullin 1a" species:7955 "Danio
rerio" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-030131-2603 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 HOVERGEN:HBG106177 HSSP:Q9JLV5 EMBL:BC045445
IPI:IPI00495948 UniGene:Dr.76883 ProteinModelPortal:Q7ZVR2
SMR:Q7ZVR2 STRING:Q7ZVR2 InParanoid:Q7ZVR2 ArrayExpress:Q7ZVR2
Uniprot:Q7ZVR2
Length = 777
Score = 680 (244.4 bits), Expect = 6.5e-67, P = 6.5e-67
Identities = 152/408 (37%), Positives = 238/408 (58%)
Query: 130 GP--SVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDA 187
GP SVY+E FE FL + FY ES +F++ EY+KKAE RL EE RV YL
Sbjct: 223 GPTLSVYKEYFETQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHE 282
Query: 188 KSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIR 247
++ ++ E+ +I H+ + H + N+L DK EDLGRMYNL R+ GL ++
Sbjct: 283 STQDELARKCEQVLIEKHL-EIFHTE---FQNLLDADKNEDLGRMYNLVSRITDGLGELK 338
Query: 248 EVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNS 305
+++ +H+ G + L DP +VQ +LD KY+ ++ SAFNND F AL+
Sbjct: 339 KLLETHIYNQGLAAIEKCGESALNDPKMYVQTILDVHKKYNALVMSAFNNDAGFVAALDK 398
Query: 306 SFEYFINLNP---------RSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQ 356
+ FIN N +SPE ++ + D L+K K E ++E L++VM++F+Y++
Sbjct: 399 ACGRFINNNAVTKMVQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIE 458
Query: 357 EKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDT 416
+KDVF+K+Y + LAKRL+ + SDDAE S+I KLK CG+++TSKL+ MF D+ S+D
Sbjct: 459 DKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKD- 517
Query: 417 MHEFYASHPELGDSRTL--VVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTG 474
++E + H + L +QVL++GSWP Q S T LP+E+ ++F ++Y H+G
Sbjct: 518 LNEQFKKHLTNSEPLDLDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSG 577
Query: 475 RRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
R+L+W ++ ++ K ++ L ST+QM +L+ +N D + Q
Sbjct: 578 RKLTWLYHLSKGELVTNCFKN-RYTLQASTFQMAILLQYNTEDVYTVQ 624
Score = 391 (142.7 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 104/328 (31%), Positives = 169/328 (51%)
Query: 7 GEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTY 66
G +LY L + +L + K E S L+ ++W D+ + +++ I Y++R +
Sbjct: 86 GLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHW 145
Query: 67 I-----PSTHKT-PVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR 120
+ T ++ L L WR+ + R + ++ N +L+L+ +ER GE IN L+
Sbjct: 146 VRRECDEGRKGTYEIYSLALVTWRECLFRP--LNKQVTNAVLKLIEKERNGETINTRLIS 203
Query: 121 NIIKMLMDLG----------P--SVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLK 168
+++ ++LG P SVY+E FE FL + FY ES +F++ EY+K
Sbjct: 204 GVVQSYVELGLNEDDAFAKGPTLSVYKEYFETQFLADTERFYTRESTEFLQQNPVTEYMK 263
Query: 169 KAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYED 228
KAE RL EE RV YL ++ ++ E+ +I H+ + H + N+L DK ED
Sbjct: 264 KAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHL-EIFHTE---FQNLLDADKNED 319
Query: 229 LGRMYNLFRRVPSGLLTIREVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYD 286
LGRMYNL R+ GL +++++ +H+ G + L DP +VQ +LD KY+
Sbjct: 320 LGRMYNLVSRITDGLGELKKLLETHIYNQGLAAIEKCGESALNDPKMYVQTILDVHKKYN 379
Query: 287 NIISSAFNNDKTFQNALNSSFEYFINLN 314
++ SAFNND F AL+ + FIN N
Sbjct: 380 ALVMSAFNNDAGFVAALDKACGRFINNN 407
>ZFIN|ZDB-GENE-040426-2887 [details] [associations]
symbol:cul1b "cullin 1b" species:7955 "Danio
rerio" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-040426-2887 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:BX005392
IPI:IPI00609210 Ensembl:ENSDART00000134947 ArrayExpress:F1Q7M5
Bgee:F1Q7M5 Uniprot:F1Q7M5
Length = 775
Score = 673 (242.0 bits), Expect = 3.6e-66, P = 3.6e-66
Identities = 156/411 (37%), Positives = 239/411 (58%)
Query: 130 GP--SVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDA 187
GP SVY+E FE FL + FY ES +F++ EY+KKAE RL EE RV YL
Sbjct: 220 GPTLSVYKEYFEAQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHE 279
Query: 188 KSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIR 247
++ ++ E+ +I H+ + H + N+L DK EDLGRMYNL R+ GL ++
Sbjct: 280 STQDELARKCEQVLIEKHL-EIFHTE---FQNLLDADKNEDLGRMYNLVSRITDGLGELK 335
Query: 248 EVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNS 305
+++ SH+ G + L DP +VQ LD KY+ ++ SAFNND F AL+
Sbjct: 336 KLLESHIHNQGLAAIEKCGDSALNDPKMYVQTTLDVHKKYNALVMSAFNNDAGFVAALDK 395
Query: 306 -SFEYFINLNP---------RSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYL 355
+ FIN N +SPE ++ + D L+K K E ++E L++VM++F+Y+
Sbjct: 396 VACGRFINNNAVTRMAQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYI 455
Query: 356 QEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQD 415
++KDVF+K+Y + LAKRL+ + SDDAE S+I KLK CG+++TSKL+ MF D+ S+D
Sbjct: 456 EDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKD 515
Query: 416 TMHEFYASHPELGDSRTL----VVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGT 471
++E + H L +S L +QVL++GSWP Q S T LP+E+ ++F ++Y
Sbjct: 516 -LNEQFKKH--LSNSEPLDLDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYGSR 572
Query: 472 HTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
H+GR+L+W ++ ++ K ++ L ST+QM +L+ FN + S Q
Sbjct: 573 HSGRKLTWLYHLSKGELVTNCFKN-RYTLQASTFQMAILLQFNTENCYSVQ 622
Score = 384 (140.2 bits), Expect = 2.7e-33, P = 2.7e-33
Identities = 106/329 (32%), Positives = 169/329 (51%)
Query: 7 GEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTY 66
G +LY L + +L + K E S L+ ++W D+ + +++ I Y++R +
Sbjct: 83 GLELYKRLKDFLRSYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLDGICAYLNRHW 142
Query: 67 IP---STHKTPVHE---LGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR 120
+ + ++E L L WR+ + R + ++ N +L+LV +ER GE IN L+
Sbjct: 143 VRRECDEGRKGIYEIYSLALVTWRECLFRP--LNKQVTNAVLKLVEKERNGETINTRLVS 200
Query: 121 NIIKMLMDLG----------P--SVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLK 168
+++ ++LG P SVY+E FE FL + FY ES +F++ EY+K
Sbjct: 201 GVVQSYVELGLNEDDAFVKGPTLSVYKEYFEAQFLADTERFYTRESTEFLQQNPVTEYMK 260
Query: 169 KAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYED 228
KAE RL EE RV YL ++ ++ E+ +I H+ + H + N+L DK ED
Sbjct: 261 KAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHL-EIFHTE---FQNLLDADKNED 316
Query: 229 LGRMYNLFRRVPSGLLTIREVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYD 286
LGRMYNL R+ GL +++++ SH+ G + L DP +VQ LD KY+
Sbjct: 317 LGRMYNLVSRITDGLGELKKLLESHIHNQGLAAIEKCGDSALNDPKMYVQTTLDVHKKYN 376
Query: 287 NIISSAFNNDKTFQNALNS-SFEYFINLN 314
++ SAFNND F AL+ + FIN N
Sbjct: 377 ALVMSAFNNDAGFVAALDKVACGRFINNN 405
>UNIPROTKB|F1SAD7 [details] [associations]
symbol:CUL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
GO:GO:0006915 GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0009887 GO:GO:0006511 GO:GO:0019005 SUPFAM:SSF75632
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:SGVINCY EMBL:CU915471
EMBL:FP565440 Ensembl:ENSSSCT00000016837 Uniprot:F1SAD7
Length = 778
Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
Identities = 151/410 (36%), Positives = 237/410 (57%)
Query: 130 GPS--VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDA 187
GP+ VY+E FE FL + FY ES +F++ EY+KKAE RL EE RV YL
Sbjct: 222 GPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHE 281
Query: 188 KSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIR 247
++ ++ E+ +I H+ + H + N+L DK EDLGRMYNL R+ GL ++
Sbjct: 282 STQDELARKCEQVLIEKHL-EIFHTE---FQNLLDADKNEDLGRMYNLVSRIQDGLGELK 337
Query: 248 EVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNS 305
+++ +H+ G + L DP +VQ +LD KY+ ++ SAFNND F AL+
Sbjct: 338 KLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDK 397
Query: 306 SFEYFINLNP---------RSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQ 356
+ FIN N +SPE ++ + D L+K K E ++E L++VM++F+Y++
Sbjct: 398 ACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIE 457
Query: 357 EKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIV-KLKTECGYQFTSKLEGMFTDMKTSQD 415
+KDVF+K+Y + LAK L+ + SDDAE S+I KLK CG+++TSKL+ MF D+ S+D
Sbjct: 458 DKDVFQKFYAKMLAK-LVHQNSASDDAEASMISNKLKQACGFEYTSKLQRMFQDIGVSKD 516
Query: 416 TMHEF--YASHPELGDSRT-LVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTH 472
+F + ++ E DS +QVL++GSWP Q S T LP+E+ ++F ++Y H
Sbjct: 517 LNEQFKKHLTNSEPLDSPVDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRH 576
Query: 473 TGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
+GR+L+W + ++ K ++ L ST+QM +L+ +N D + Q
Sbjct: 577 SGRKLTWLYQLSKGELVTNCFKN-RYTLQASTFQMAILLQYNTEDAYAVQ 625
Score = 396 (144.5 bits), Expect = 4.6e-35, P = 4.6e-35
Identities = 104/328 (31%), Positives = 170/328 (51%)
Query: 7 GEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTY 66
G +LY L + +L + K E S L+ ++W D+ + +++ I Y++R +
Sbjct: 85 GLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHW 144
Query: 67 IP---STHKTPVHE---LGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR 120
+ + ++E L L WRD + R + ++ N +L+L+ +ER GE IN L+
Sbjct: 145 VRRECDEGRKGIYEIYSLALVTWRDCLFRP--LNKQVTNAVLKLIEKERNGETINTRLIS 202
Query: 121 NIIKMLMDLG----------PS--VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLK 168
+++ ++LG P+ VY+E FE FL + FY ES +F++ EY+K
Sbjct: 203 GVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMK 262
Query: 169 KAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYED 228
KAE RL EE RV YL ++ ++ E+ +I H+ + H + N+L DK ED
Sbjct: 263 KAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHL-EIFHTE---FQNLLDADKNED 318
Query: 229 LGRMYNLFRRVPSGLLTIREVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYD 286
LGRMYNL R+ GL +++++ +H+ G + L DP +VQ +LD KY+
Sbjct: 319 LGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYN 378
Query: 287 NIISSAFNNDKTFQNALNSSFEYFINLN 314
++ SAFNND F AL+ + FIN N
Sbjct: 379 ALVMSAFNNDAGFVAALDKACGRFINNN 406
>UNIPROTKB|E2QRU7 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031462 "Cul2-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031462 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K03870 OMA:VMLDYVE CTD:8453
EMBL:AAEX03001145 RefSeq:XP_535140.2 Ensembl:ENSCAFT00000005971
GeneID:477952 KEGG:cfa:477952 NextBio:20853352 Uniprot:E2QRU7
Length = 745
Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
Identities = 152/468 (32%), Positives = 266/468 (56%)
Query: 75 VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLG---- 130
+ EL L++WR +V +QT L+ LL + +R GE N+ ++ +I + +
Sbjct: 139 IGELALDMWRKLMVEP--LQTILIRMLLREIKNDRGGEDPNQKVIHGVINSFVHVEQYKK 196
Query: 131 --P-SVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDA 187
P YQE FE PFL + E+YK E+ ++ +C +Y++K RL +E R YL
Sbjct: 197 KFPLKFYQEIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHP 256
Query: 188 KSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIR 247
S K+ + ++ M+A+H+ + +H + N++ +K D+ MY L R V +GL +
Sbjct: 257 SSYTKVIHECQQRMVADHL-QFLHAECH---NIIRQEKKNDMANMYVLLRAVSTGLPHMI 312
Query: 248 EVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSF 307
+ + +H+++ G + ++ + P FV+ +L+ K+ +I++ N D+ F +AL+ +
Sbjct: 313 QELQNHIQDEGLRATSNLTQENMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKAL 372
Query: 308 EYFINLN-PRS----PEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFE 362
+N P+S PE ++ + D+ L+K KG++E +VE L + +F+Y+ +KDVF+
Sbjct: 373 TSVVNYREPKSVCKAPELLAKYCDNLLKKSAKGMTENEVEDKLTSFITVFKYIDDKDVFQ 432
Query: 363 KYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF-- 420
K+Y + LAKRL+ G ++S D+E ++I KLK CGY+FTSKL M+TDM S D ++F
Sbjct: 433 KFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNN 492
Query: 421 YASHPE----LGDSRTLVVQVLTTGSWP-TQ-PSVTCNLPAEMSALCEKFRSYYLGTHTG 474
+ + + LG S + VL G+WP TQ PS T +P E+ + F +Y +G
Sbjct: 493 FIKNQDTVIDLGIS--FQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSG 550
Query: 475 RRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
R+L+W + + ++K + G+ + V+TYQM VL+ FNN++ +SY+
Sbjct: 551 RKLTWLHYLCTGEVKMNY-LGKPYVAMVTTYQMAVLLAFNNSETVSYK 597
>UNIPROTKB|Q08DE9 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031462 "Cul2-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031462 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713
HOVERGEN:HBG106177 KO:K03870 OMA:VMLDYVE CTD:8453 OrthoDB:EOG4Z0B51
EMBL:DAAA02035372 EMBL:BC123787 EMBL:BC150023 IPI:IPI00704669
RefSeq:NP_001070377.1 UniGene:Bt.38802 STRING:Q08DE9
Ensembl:ENSBTAT00000055001 GeneID:535219 KEGG:bta:535219
InParanoid:Q08DE9 NextBio:20876664 Uniprot:Q08DE9
Length = 745
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 151/468 (32%), Positives = 264/468 (56%)
Query: 75 VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLG---- 130
+ EL L++WR +V +Q L+ LL + +R GE N+ ++ +I + +
Sbjct: 139 IGELALDMWRKLMVEP--LQAILIRMLLREIKNDRGGEDPNQKVIHGVINSFVHVEQYKK 196
Query: 131 --P-SVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDA 187
P YQE FE PFL + E+YK E+ ++ +C +Y++K RL +E R YL
Sbjct: 197 KFPLKFYQEIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHP 256
Query: 188 KSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIR 247
S K+ + ++ M+A+H+ + +H + N++ +K D+ MY L R V +GL +
Sbjct: 257 SSYTKVIHECQQRMVADHL-QFLHAECH---NIIRQEKKNDMANMYVLLRAVSTGLPHMI 312
Query: 248 EVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSF 307
+ + +H+ + G + ++ + P FV+ +L+ K+ +I++ N D+ F +AL+ +
Sbjct: 313 QELQNHIHDEGLRATSNLTQENMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKAL 372
Query: 308 EYFINLN-PRS----PEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFE 362
+N P+S PE ++ + D+ L+K KG++E +VE L + +F+Y+ +KDVF+
Sbjct: 373 TSVVNYREPKSVCKAPELLAKYCDNLLKKSAKGMTENEVEDKLTSFITVFKYIDDKDVFQ 432
Query: 363 KYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF-- 420
K+Y + LAKRL+ G ++S D+E ++I KLK CGY+FTSKL M+TDM S D ++F
Sbjct: 433 KFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNN 492
Query: 421 YASHPE----LGDSRTLVVQVLTTGSWP-TQ-PSVTCNLPAEMSALCEKFRSYYLGTHTG 474
+ + + LG S + VL G+WP TQ PS T +P E+ + F +Y +G
Sbjct: 493 FIKNQDTVIDLGIS--FQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSG 550
Query: 475 RRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
R+L+W + + ++K + G+ + V+TYQM VL+ FNN++ +SY+
Sbjct: 551 RKLTWLHYLCTGEVKMNY-LGKPYVAMVTTYQMAVLLAFNNSETVSYK 597
>UNIPROTKB|Q13617 [details] [associations]
symbol:CUL2 "Cullin-2" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IDA] [GO:0031462 "Cul2-RING ubiquitin
ligase complex" evidence=IDA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=TAS] [GO:0008285 "negative regulation
of cell proliferation" evidence=TAS] [GO:0097193 "intrinsic
apoptotic signaling pathway" evidence=TAS] [GO:0007050 "cell cycle
arrest" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=TAS] [GO:0061418 "regulation of transcription
from RNA polymerase II promoter in response to hypoxia"
evidence=TAS] [GO:0071456 "cellular response to hypoxia"
evidence=TAS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 Reactome:REACT_120956 GO:GO:0005829
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0008285 GO:GO:0005654
GO:GO:0000082 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007050
GO:GO:0016567 EMBL:CH471072 GO:GO:0006511 GO:GO:0097193
eggNOG:COG5647 SUPFAM:SSF75632 Pathway_Interaction_DB:hif1apathway
GO:GO:0061418 GO:GO:0031462 GO:GO:0031625 InterPro:IPR016159
SUPFAM:SSF74788 HOVERGEN:HBG106177 KO:K03870 OMA:VMLDYVE
EMBL:U83410 EMBL:AF126404 EMBL:AK095217 EMBL:AK300491 EMBL:AL392046
EMBL:BC009591 EMBL:BC110901 EMBL:U58088 IPI:IPI00014311
IPI:IPI00985090 RefSeq:NP_001185706.1 RefSeq:NP_001185707.1
RefSeq:NP_001185708.1 RefSeq:NP_003582.2 UniGene:Hs.82919
ProteinModelPortal:Q13617 SMR:Q13617 DIP:DIP-31612N IntAct:Q13617
MINT:MINT-1523339 STRING:Q13617 PhosphoSite:Q13617 DMDM:19863260
PaxDb:Q13617 PRIDE:Q13617 DNASU:8453 Ensembl:ENST00000374748
Ensembl:ENST00000374749 Ensembl:ENST00000374751
Ensembl:ENST00000537177 GeneID:8453 KEGG:hsa:8453 UCSC:uc001ixv.3
CTD:8453 GeneCards:GC10M035338 HGNC:HGNC:2552 HPA:CAB002677
HPA:HPA024578 MIM:603135 neXtProt:NX_Q13617 PharmGKB:PA27048
InParanoid:Q13617 OrthoDB:EOG4Z0B51 PhylomeDB:Q13617 ChiTaRS:CUL2
GenomeRNAi:8453 NextBio:31634 ArrayExpress:Q13617 Bgee:Q13617
CleanEx:HS_CUL2 Genevestigator:Q13617 GermOnline:ENSG00000108094
Uniprot:Q13617
Length = 745
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 151/468 (32%), Positives = 264/468 (56%)
Query: 75 VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLG---- 130
+ EL L++WR +V +Q L+ LL + +R GE N+ ++ +I + +
Sbjct: 139 IGELALDMWRKLMVEP--LQAILIRMLLREIKNDRGGEDPNQKVIHGVINSFVHVEQYKK 196
Query: 131 --P-SVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDA 187
P YQE FE PFL + E+YK E+ ++ +C +Y++K RL +E R YL
Sbjct: 197 KFPLKFYQEIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHP 256
Query: 188 KSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIR 247
S K+ + ++ M+A+H+ + +H + N++ +K D+ MY L R V +GL +
Sbjct: 257 SSYTKVIHECQQRMVADHL-QFLHAECH---NIIRQEKKNDMANMYVLLRAVSTGLPHMI 312
Query: 248 EVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSF 307
+ + +H+ + G + ++ + P FV+ +L+ K+ +I++ N D+ F +AL+ +
Sbjct: 313 QELQNHIHDEGLRATSNLTQENMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKAL 372
Query: 308 EYFINLN-PRS----PEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFE 362
+N P+S PE ++ + D+ L+K KG++E +VE L + +F+Y+ +KDVF+
Sbjct: 373 TSVVNYREPKSVCKAPELLAKYCDNLLKKSAKGMTENEVEDRLTSFITVFKYIDDKDVFQ 432
Query: 363 KYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF-- 420
K+Y + LAKRL+ G ++S D+E ++I KLK CGY+FTSKL M+TDM S D ++F
Sbjct: 433 KFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNN 492
Query: 421 YASHPE----LGDSRTLVVQVLTTGSWP-TQ-PSVTCNLPAEMSALCEKFRSYYLGTHTG 474
+ + + LG S + VL G+WP TQ PS T +P E+ + F +Y +G
Sbjct: 493 FIKNQDTVIDLGIS--FQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSG 550
Query: 475 RRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
R+L+W + + ++K + G+ + V+TYQM VL+ FNN++ +SY+
Sbjct: 551 RKLTWLHYLCTGEVKMNY-LGKPYVAMVTTYQMAVLLAFNNSETVSYK 597
>UNIPROTKB|Q5T2B5 [details] [associations]
symbol:CUL2 "Cullin-2" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176713
HOVERGEN:HBG106177 EMBL:AL392046 UniGene:Hs.82919 HGNC:HGNC:2552
ChiTaRS:CUL2 IPI:IPI00642151 SMR:Q5T2B5 Ensembl:ENST00000374742
Ensembl:ENST00000374746 Uniprot:Q5T2B5
Length = 706
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 151/468 (32%), Positives = 264/468 (56%)
Query: 75 VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLG---- 130
+ EL L++WR +V +Q L+ LL + +R GE N+ ++ +I + +
Sbjct: 139 IGELALDMWRKLMVEP--LQAILIRMLLREIKNDRGGEDPNQKVIHGVINSFVHVEQYKK 196
Query: 131 --P-SVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDA 187
P YQE FE PFL + E+YK E+ ++ +C +Y++K RL +E R YL
Sbjct: 197 KFPLKFYQEIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHP 256
Query: 188 KSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIR 247
S K+ + ++ M+A+H+ + +H + N++ +K D+ MY L R V +GL +
Sbjct: 257 SSYTKVIHECQQRMVADHL-QFLHAECH---NIIRQEKKNDMANMYVLLRAVSTGLPHMI 312
Query: 248 EVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSF 307
+ + +H+ + G + ++ + P FV+ +L+ K+ +I++ N D+ F +AL+ +
Sbjct: 313 QELQNHIHDEGLRATSNLTQENMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKAL 372
Query: 308 EYFINLN-PRS----PEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFE 362
+N P+S PE ++ + D+ L+K KG++E +VE L + +F+Y+ +KDVF+
Sbjct: 373 TSVVNYREPKSVCKAPELLAKYCDNLLKKSAKGMTENEVEDRLTSFITVFKYIDDKDVFQ 432
Query: 363 KYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF-- 420
K+Y + LAKRL+ G ++S D+E ++I KLK CGY+FTSKL M+TDM S D ++F
Sbjct: 433 KFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNN 492
Query: 421 YASHPE----LGDSRTLVVQVLTTGSWP-TQ-PSVTCNLPAEMSALCEKFRSYYLGTHTG 474
+ + + LG S + VL G+WP TQ PS T +P E+ + F +Y +G
Sbjct: 493 FIKNQDTVIDLGIS--FQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSG 550
Query: 475 RRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
R+L+W + + ++K + G+ + V+TYQM VL+ FNN++ +SY+
Sbjct: 551 RKLTWLHYLCTGEVKMNY-LGKPYVAMVTTYQMAVLLAFNNSETVSYK 597
>UNIPROTKB|Q5T2B7 [details] [associations]
symbol:CUL2 "Cullin-2" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
HOGENOM:HOG000176713 HOVERGEN:HBG106177 EMBL:AL392046
UniGene:Hs.82919 HGNC:HGNC:2552 ChiTaRS:CUL2 IPI:IPI00647073
SMR:Q5T2B7 Ensembl:ENST00000374754 Uniprot:Q5T2B7
Length = 688
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 151/468 (32%), Positives = 264/468 (56%)
Query: 75 VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLG---- 130
+ EL L++WR +V +Q L+ LL + +R GE N+ ++ +I + +
Sbjct: 82 IGELALDMWRKLMVEP--LQAILIRMLLREIKNDRGGEDPNQKVIHGVINSFVHVEQYKK 139
Query: 131 --P-SVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDA 187
P YQE FE PFL + E+YK E+ ++ +C +Y++K RL +E R YL
Sbjct: 140 KFPLKFYQEIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHP 199
Query: 188 KSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIR 247
S K+ + ++ M+A+H+ + +H + N++ +K D+ MY L R V +GL +
Sbjct: 200 SSYTKVIHECQQRMVADHL-QFLHAECH---NIIRQEKKNDMANMYVLLRAVSTGLPHMI 255
Query: 248 EVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSF 307
+ + +H+ + G + ++ + P FV+ +L+ K+ +I++ N D+ F +AL+ +
Sbjct: 256 QELQNHIHDEGLRATSNLTQENMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKAL 315
Query: 308 EYFINLN-PRS----PEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFE 362
+N P+S PE ++ + D+ L+K KG++E +VE L + +F+Y+ +KDVF+
Sbjct: 316 TSVVNYREPKSVCKAPELLAKYCDNLLKKSAKGMTENEVEDRLTSFITVFKYIDDKDVFQ 375
Query: 363 KYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF-- 420
K+Y + LAKRL+ G ++S D+E ++I KLK CGY+FTSKL M+TDM S D ++F
Sbjct: 376 KFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNN 435
Query: 421 YASHPE----LGDSRTLVVQVLTTGSWP-TQ-PSVTCNLPAEMSALCEKFRSYYLGTHTG 474
+ + + LG S + VL G+WP TQ PS T +P E+ + F +Y +G
Sbjct: 436 FIKNQDTVIDLGIS--FQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSG 493
Query: 475 RRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
R+L+W + + ++K + G+ + V+TYQM VL+ FNN++ +SY+
Sbjct: 494 RKLTWLHYLCTGEVKMNY-LGKPYVAMVTTYQMAVLLAFNNSETVSYK 540
>TAIR|locus:2018645 [details] [associations]
symbol:AT1G43140 species:3702 "Arabidopsis thaliana"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 KO:K03347 EMBL:AC005687 IPI:IPI00938797
RefSeq:NP_175007.2 UniGene:At.74523 ProteinModelPortal:P0CH31
SMR:P0CH31 EnsemblPlants:AT1G43140.1 GeneID:3767291
KEGG:ath:AT1G43140 TAIR:At1g43140 HOGENOM:HOG000176712 OMA:RTISKTD
Uniprot:P0CH31
Length = 721
Score = 650 (233.9 bits), Expect = 9.7e-64, P = 9.7e-64
Identities = 172/532 (32%), Positives = 278/532 (52%)
Query: 6 FGEKLYSGLVSTMTLHLKE-ISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDR 64
+ ++LY+ + + KE + S+ G L EL ++W +H ++ + Y+DR
Sbjct: 67 YSQELYNKYRGVVDHYNKETVLPSMRERHGEYMLRELVKRWANHKILVRWLSRFCFYLDR 126
Query: 65 TYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIK 124
Y+ ++++G + D + + +IQ+ + LL L+H+ER GE I+R L++N+I
Sbjct: 127 FYVARRGLPTLNDVGFTSFHDLVYQ--EIQSEAKDVLLALIHKEREGEQIDRTLVKNVID 184
Query: 125 MLMDLGPS---VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERV 181
+ G +Y+EDFE L+ +A +Y ++ ++ + C +Y+ KAE L E ERV
Sbjct: 185 VYCGNGVGQMVIYEEDFESFLLQDTASYYSRKASRWSQEDSCPDYMLKAEECLKLEKERV 244
Query: 182 THYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPS 241
T+YL + +E K+ V+ E++ +L+ ++SG + +L DDK DL RMY L+R +P
Sbjct: 245 TNYLHSTTEPKLVEKVQNELLVVVAKQLIENEHSGCLALLRDDKMGDLSRMYRLYRLIPQ 304
Query: 242 GLLTIREVMTSHLRETGKQLV---TDPERLKDPVE---FVQRLLDEKDKYDNIISSAFNN 295
GL I ++ H+ G L+ D +D V++ ++ DKY + F
Sbjct: 305 GLEPIADLFKQHVTAEGNALIKQAADAATNQDASASQVLVRKEIELHDKYMVYVDECFQK 364
Query: 296 DKTFQNALNSSFEYFIN---LNPRSPEFISLFVDD--KLRKGLKGVSEEDVETILDKVMM 350
F L +FE F N S E ++ + D+ K R G + +S+E E L+KV+
Sbjct: 365 HSLFHKLLKEAFEVFCNKTVAGASSAEILATYCDNILKTRGGSEKLSDEATEITLEKVVN 424
Query: 351 LFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDM 410
L Y+ +KD+F ++Y++ A+RLL +RS I+K T+ +L+ F D
Sbjct: 425 LLVYISDKDLFAEFYRKKQARRLLF--------DRSGIMKEVTDI--TLARELQTNFVDY 474
Query: 411 KTSQDTMHEFYASHPELGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLG 470
++ T +LG T V VLTTG WP+ + NLP EM E F+ +Y G
Sbjct: 475 LSANMTT--------KLGIDFT--VTVLTTGFWPSYKTTDLNLPTEMVNCVEAFKVFY-G 523
Query: 471 THTG-RRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSY 521
T T RRLSW ++G+ I F K + EL VSTYQ VL+LFNNA+RLSY
Sbjct: 524 TKTNSRRLSWIYSLGTCHILGKFEK-KTMELVVSTYQAAVLLLFNNAERLSY 574
>UNIPROTKB|F1N829 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031462 "Cul2-RING ubiquitin ligase complex"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031462 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:VMLDYVE EMBL:AADN02000467
EMBL:AADN02000468 EMBL:AADN02000469 IPI:IPI00822359
Ensembl:ENSGALT00000011487 ArrayExpress:F1N829 Uniprot:F1N829
Length = 747
Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
Identities = 151/470 (32%), Positives = 264/470 (56%)
Query: 75 VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLG---- 130
+ EL L++WR ++ +Q L+ LL + +R GE N+ ++ +I + +
Sbjct: 139 IGELALDMWRKLMIEP--LQAILIRMLLREIKNDRCGEDPNQKVIHGVINSFVHVEQYKK 196
Query: 131 --P-SVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDA 187
P YQE FE PFL + E+YK E+ ++ +C +Y++K RL +E R YL
Sbjct: 197 KLPLKFYQEIFECPFLNETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEMRCRKYLHP 256
Query: 188 KSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIR 247
S K+ + ++ M+A+H+ + +H + N++ +K D+ MY L R V SGL +
Sbjct: 257 SSYGKVIHECQQRMVADHL-QFLHAECH---NIIRQEKRNDMANMYTLLRAVSSGLPHMI 312
Query: 248 EVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSF 307
+ + +H+ + G + ++ + P +FV+ +L+ K+ +I++ N D+ F +AL+ +
Sbjct: 313 QELQNHIHDEGLRATSNLSQENMPTQFVESVLEVHSKFVQLINTVLNGDQHFMSALDKAL 372
Query: 308 EYFINLN-PRS----PEFISL--FVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDV 360
+N P+S PE + L + D+ L+K KG++E +VE L + +F+Y+ +KDV
Sbjct: 373 TSVVNYREPKSICKAPELLELAKYCDNLLKKSAKGMTENEVEDKLTSFITVFKYIDDKDV 432
Query: 361 FEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF 420
F+K+Y + LAKRL+ G ++S D+E ++I KLK CGY+FTSKL M+TDM S D ++F
Sbjct: 433 FQKFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKF 492
Query: 421 --YASHPE----LGDSRTLVVQVLTTGSWP-TQ-PSVTCNLPAEMSALCEKFRSYYLGTH 472
+ + + LG S + VL G+WP TQ PS T +P E+ + F +Y
Sbjct: 493 NNFIKNQDTIIDLGIS--FQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHF 550
Query: 473 TGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
+GR+L+W + + ++K + + + V+TYQM VL+ FNN++ +SY+
Sbjct: 551 SGRKLTWLHYLCTGEVKMNY-LCKPYVAMVTTYQMAVLLAFNNSETVSYK 599
>DICTYBASE|DDB_G0291972 [details] [associations]
symbol:culA "cullin A" species:44689 "Dictyostelium
discoideum" [GO:0030587 "sorocarp development" evidence=IMP]
[GO:0030154 "cell differentiation" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006935 "chemotaxis"
evidence=IMP] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=ISS] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 dictyBase:DDB_G0291972 GO:GO:0030154
GenomeReviews:CM000155_GR GO:GO:0000082 EMBL:AAFI02000187
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0030587 GO:GO:0006935
GO:GO:0006511 GO:GO:0019005 GO:GO:0004842 eggNOG:COG5647
SUPFAM:SSF75632 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03347
OMA:SGVINCY EMBL:AF020287 RefSeq:XP_629756.1 HSSP:Q13616
ProteinModelPortal:O60999 SMR:O60999 STRING:O60999
EnsemblProtists:DDB0185191 GeneID:8628431 KEGG:ddi:DDB_G0291972
ProtClustDB:CLSZ2429454 Uniprot:O60999
Length = 770
Score = 645 (232.1 bits), Expect = 3.3e-63, P = 3.3e-63
Identities = 146/407 (35%), Positives = 235/407 (57%)
Query: 133 VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAK 192
VY+ FE+ FL + +Y ES KFI +Y+KK E RLNEE++RV YL +E++
Sbjct: 218 VYKSGFEELFLTATENYYTNESAKFISENSVADYMKKVETRLNEEVKRVQQYLHQNTESE 277
Query: 193 ITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREVMTS 252
+ EK +I H V + + +L DK DL RMY+L R+P GL +R +
Sbjct: 278 LIAKCEKVLIEKH----VEVIWNEFQTLLEKDKIPDLTRMYSLLSRIPRGLEPLRTTLEK 333
Query: 253 HLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEYF 310
H++ G Q V+ + +P +++ LL KY+ +++ AF +D F +L+ + F
Sbjct: 334 HVQNVGLQAVSSIATNGVIEPKVYIETLLKVFKKYNELVTGAFRSDTGFVASLDKACRRF 393
Query: 311 INLNP---------RSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVF 361
IN N +SPE ++ F D L+K E ++E +L+ VM++F+Y+++KDVF
Sbjct: 394 INENAVTIAAKSSSKSPELLARFTDFLLKKSPNNPEESEMEQLLNDVMIVFKYIEDKDVF 453
Query: 362 EKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEFY 421
+ +Y + LAKRL+ G + S+D E ++I KLK+ CGY++TSKL+ MFTDM S++ + F
Sbjct: 454 QDFYSKMLAKRLIHGTSTSEDLEGTMIGKLKSTCGYEYTSKLQRMFTDMSLSRELLDRFN 513
Query: 422 ASHPELGDSRTLVVQ----VLTTGSWPTQP-SVTCNLPAEMSALCEK-FRSYYLGTHTGR 475
+H E + +L + VL TGSWP QP S ++P E+ A CE+ F+ +Y H+GR
Sbjct: 514 -NHIEQVERSSLNIDFSVLVLATGSWPLQPPSTNFSIPKELQA-CEQLFQKFYQNQHSGR 571
Query: 476 RLSWQTNMGSADIKATFGKGQK--HELNVSTYQMCVLMLFNNADRLS 520
+L+W ++ ++K + + K + L STYQ+ VL+ FN + L+
Sbjct: 572 KLNWLHHLSKGELKTKYLQTSKSGYTLQCSTYQIGVLLQFNQYETLT 618
Score = 389 (142.0 bits), Expect = 5.5e-34, P = 5.5e-34
Identities = 103/326 (31%), Positives = 165/326 (50%)
Query: 7 GEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTY 66
GE LY+ L + H+ ++ K E L +W+ + A++ I +I YM+R +
Sbjct: 78 GEDLYNRLNLFLKKHMSQLLKLTETKMDEPLLNYYYTEWDRYTSAMKYINNIFQYMNRYW 137
Query: 67 IP---STHKTPVHE---LGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR 120
I K V+E L L +WRD + ++ RL N+LL+++ ER G IN L++
Sbjct: 138 IKREIDDGKKEVYEIFILSLVIWRDCLF--TPLKQRLTNSLLDIIESERNGYQINTHLIK 195
Query: 121 NIIKMLMDLG-----PS-----VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKA 170
+I + LG P VY+ FE+ FL + +Y ES KFI +Y+KK
Sbjct: 196 GVINGYVSLGLNREKPKETILQVYKSGFEELFLTATENYYTNESAKFISENSVADYMKKV 255
Query: 171 ERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLG 230
E RLNEE++RV YL +E+++ EK +I H V + + +L DK DL
Sbjct: 256 ETRLNEEVKRVQQYLHQNTESELIAKCEKVLIEKH----VEVIWNEFQTLLEKDKIPDLT 311
Query: 231 RMYNLFRRVPSGLLTIREVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYDNI 288
RMY+L R+P GL +R + H++ G Q V+ + +P +++ LL KY+ +
Sbjct: 312 RMYSLLSRIPRGLEPLRTTLEKHVQNVGLQAVSSIATNGVIEPKVYIETLLKVFKKYNEL 371
Query: 289 ISSAFNNDKTFQNALNSSFEYFINLN 314
++ AF +D F +L+ + FIN N
Sbjct: 372 VTGAFRSDTGFVASLDKACRRFINEN 397
>ZFIN|ZDB-GENE-030131-8032 [details] [associations]
symbol:cul2 "cullin 2" species:7955 "Danio rerio"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0001944 "vasculature development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 ZFIN:ZDB-GENE-030131-8032
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009790 GO:GO:0006511
GO:GO:0001944 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:BX294164
IPI:IPI00998382 Ensembl:ENSDART00000013257 ArrayExpress:F1Q690
Bgee:F1Q690 Uniprot:F1Q690
Length = 764
Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
Identities = 149/468 (31%), Positives = 260/468 (55%)
Query: 75 VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLG---- 130
+ EL L++WR ++ +Q L+ LL+ + +R GE N+ ++ +I + +
Sbjct: 158 IGELALDMWRKLMIEP--LQPMLIGKLLKEIKNDRCGEDPNQKVIHGVINSFVHVEQYKK 215
Query: 131 --P-SVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDA 187
P YQE FE PFL + E+YK E+ ++ +C +Y++K RL +E R YL
Sbjct: 216 KFPLKFYQEIFEGPFLTKTGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEVRCRKYLHP 275
Query: 188 KSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIR 247
S +K+ + ++ M+A+H+ + +H + N++ +K +D+ MY L R V SGL +
Sbjct: 276 SSYSKVIHECQQRMVADHL-QFLHGECQ---NIIRQEKRDDMANMYTLLRAVSSGLPHMI 331
Query: 248 EVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSF 307
+ + H+ + G + + + P FV+ +L+ K+ +I++ N D+ F +AL+ +
Sbjct: 332 QELQVHIHDEGIRATINLSQENMPTLFVESVLEVHSKFVQLINTVLNGDQHFMSALDKAL 391
Query: 308 EYFINLN-PRS----PEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFE 362
+N P+S PE ++ + D+ L+K KG++E +VE L + +F+Y+ +KDVF+
Sbjct: 392 TSVVNYREPKSICKAPELLAKYCDNLLKKSAKGMTENEVEDKLTSFITVFKYIDDKDVFQ 451
Query: 363 KYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF-- 420
K Y + LAKRL+ G ++S D+E ++I KLK CGY+FTSKL M+TDM S D ++F
Sbjct: 452 KIYARMLAKRLIHGLSLSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSTDLNNKFNN 511
Query: 421 YASHPE----LGDSRTLVVQVLTTGSWPTQ--PSVTCNLPAEMSALCEKFRSYYLGTHTG 474
+ E LG S + VL G+WP PS T +P E+ + F +Y +G
Sbjct: 512 FIKTQETVVDLGIS--FQIYVLQAGAWPLTHVPSSTFAIPQELEKSVQMFELFYNQHFSG 569
Query: 475 RRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
R+L+W + + ++K + + + V+TYQM VL+ FNN++ +SY+
Sbjct: 570 RKLTWLHYLCTGEVKMNY-LSKPYVAVVTTYQMAVLLAFNNSETVSYK 616
>UNIPROTKB|F1P2W9 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS50069 SMART:SM00182 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:AADN02000467
EMBL:AADN02000468 EMBL:AADN02000469 IPI:IPI00595196
Ensembl:ENSGALT00000038545 ArrayExpress:F1P2W9 Uniprot:F1P2W9
Length = 687
Score = 618 (222.6 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
Identities = 141/435 (32%), Positives = 247/435 (56%)
Query: 108 ERTGEVINRGLMRNIIKMLMDLG------P-SVYQEDFEKPFLEVSAEFYKVESQKFIEC 160
+R GE N+ ++ +I + + P YQE FE PFL + E+YK E+ ++
Sbjct: 198 DRCGEDPNQKVIHGVINSFVHVEQYKKKLPLKFYQEIFECPFLNETGEYYKQEASNLLQE 257
Query: 161 CDCGEYLKKAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNM 220
+C +Y++K RL +E R YL S K+ + ++ M+A+H+ + +H + N+
Sbjct: 258 SNCSQYMEKVLGRLKDEEMRCRKYLHPSSYGKVIHECQQRMVADHL-QFLHAECH---NI 313
Query: 221 LLDDKYEDLGRMYNLFRRVPSGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLD 280
+ +K D+ MY L R V SGL + + + +H+ + G + ++ + P +FV+ +L+
Sbjct: 314 IRQEKRNDMANMYTLLRAVSSGLPHMIQELQNHIHDEGLRATSNLSQENMPTQFVESVLE 373
Query: 281 EKDKYDNIISSAFNNDKTFQNALNSSFEYFINLN-PRS----PEFISLFVDDKLRKGLKG 335
K+ +I++ N D+ F +AL+ + +N P+S PE ++ + D+ L+K KG
Sbjct: 374 VHSKFVQLINTVLNGDQHFMSALDKALTSVVNYREPKSICKAPELLAKYCDNLLKKSAKG 433
Query: 336 VSEEDVETILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTEC 395
++E +VE L + +F+Y+ +KDVF+K+Y + LAKRL+ G ++S D+E ++I KLK C
Sbjct: 434 MTENEVEDKLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLKQAC 493
Query: 396 GYQFTSKLEGMFTDMKTSQDTMHEF--YASHPE----LGDSRTLVVQVLTTGSWP-TQ-P 447
GY+FTSKL M+TDM S D ++F + + + LG S + VL G+WP TQ P
Sbjct: 494 GYEFTSKLHRMYTDMSVSADLNNKFNNFIKNQDTIIDLGIS--FQIYVLQAGAWPLTQAP 551
Query: 448 SVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQM 507
S T +P E+ + F +Y +GR+L+W + + ++K + + + V+TYQM
Sbjct: 552 SSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNY-LCKPYVAMVTTYQM 610
Query: 508 CVLMLFNNADRLSYQ 522
VL+ FNN++ +SY+
Sbjct: 611 AVLLAFNNSETVSYK 625
Score = 37 (18.1 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
Identities = 9/53 (16%), Positives = 23/53 (43%)
Query: 21 HLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPSTHKT 73
H+ + K + ++ L +R W +++K + + Y++ +I T
Sbjct: 67 HVHHLHKRVLESEE-QVLVMYHRYWEEYSKGADYMDCLYRYLNTQFIKKNKLT 118
>MGI|MGI:1918995 [details] [associations]
symbol:Cul2 "cullin 2" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0030891
"VCB complex" evidence=ISO] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031462 "Cul2-RING ubiquitin
ligase complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 MGI:MGI:1918995 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 GO:GO:0030163 GO:GO:0006511
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031462 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713
HOVERGEN:HBG106177 KO:K03870 OMA:VMLDYVE CTD:8453 OrthoDB:EOG4Z0B51
EMBL:AK016520 EMBL:AK160597 EMBL:BC026779 EMBL:BC027428
EMBL:BC025902 IPI:IPI00387216 IPI:IPI00387217 RefSeq:NP_083678.2
UniGene:Mm.291707 UniGene:Mm.443148 ProteinModelPortal:Q9D4H8
SMR:Q9D4H8 IntAct:Q9D4H8 STRING:Q9D4H8 PhosphoSite:Q9D4H8
PaxDb:Q9D4H8 PRIDE:Q9D4H8 Ensembl:ENSMUST00000025073
Ensembl:ENSMUST00000162301 GeneID:71745 KEGG:mmu:71745
UCSC:uc008dxz.2 InParanoid:Q9D4H8 NextBio:334387 Bgee:Q9D4H8
CleanEx:MM_CUL2 Genevestigator:Q9D4H8 GermOnline:ENSMUSG00000024231
Uniprot:Q9D4H8
Length = 745
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 149/468 (31%), Positives = 260/468 (55%)
Query: 75 VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLG---- 130
+ EL L++WR +V +Q L+ LL + +R GE N+ ++ +I + +
Sbjct: 139 IGELALDMWRKLMVEP--LQNILIRMLLREIKNDRGGEDPNQKVIHGVINSFVHVEQYKK 196
Query: 131 --P-SVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDA 187
P YQ F PFL + E+YK E+ ++ +C +Y++K RL +E R YL
Sbjct: 197 KFPLKFYQGIFVSPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHP 256
Query: 188 KSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIR 247
S K+ + ++ M+A+H+ + +H + ++ ++ D+ MY L R V SGL +
Sbjct: 257 SSYTKVIHECQQRMVADHL-QFLHSECHSIIQQ---ERKNDMANMYVLLRAVSSGLPHMI 312
Query: 248 EVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSF 307
E + H+ + G + ++ + P FV+ +L+ K+ +I++ N D+ F +AL+ +
Sbjct: 313 EELQKHIHDEGLRATSNLTQEHMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKAL 372
Query: 308 EYFINLN-PRS----PEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFE 362
+N P+S PE ++ + D+ L+K KG++E +VE L + +F+Y+ +KDVF+
Sbjct: 373 TSVVNYREPKSVCKAPELLAKYCDNLLKKSAKGMTENEVEDKLTSFITVFKYIDDKDVFQ 432
Query: 363 KYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF-- 420
K+Y + LAKRL+ G ++S D+E ++I KLK CGY+FTSKL M+TDM S D ++F
Sbjct: 433 KFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNN 492
Query: 421 YASHPE----LGDSRTLVVQVLTTGSWP-TQ-PSVTCNLPAEMSALCEKFRSYYLGTHTG 474
+ + + LG S + VL G+WP TQ PS T +P E+ + F +Y +G
Sbjct: 493 FIRNQDTVIDLGIS--FQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSG 550
Query: 475 RRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
R+L+W + + ++K + G+ + V+TYQM VL+ FNN++ +SY+
Sbjct: 551 RKLTWLHYLCTGEVKMNY-LGKPYVAMVTTYQMAVLLAFNNSETVSYK 597
>RGD|1310644 [details] [associations]
symbol:Cul2 "cullin 2" species:10116 "Rattus norvegicus"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0030163 "protein catabolic process" evidence=ISO] [GO:0030891
"VCB complex" evidence=IDA] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031462 "Cul2-RING ubiquitin
ligase complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA;ISO] [GO:0032403 "protein complex binding"
evidence=IPI] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IC] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 RGD:1310644
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0030891
IPI:IPI00559025 PRIDE:D4AEE5 Ensembl:ENSRNOT00000021462
UCSC:RGD:1310644 ArrayExpress:D4AEE5 Uniprot:D4AEE5
Length = 706
Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
Identities = 149/468 (31%), Positives = 260/468 (55%)
Query: 75 VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLG---- 130
+ EL L++WR +V +Q L+ LL + +R GE N+ ++ +I + +
Sbjct: 139 IGELALDMWRKLMVEP--LQNILIRMLLREIKNDRGGEDPNQKVIHGVINSFVHVEQYKK 196
Query: 131 --P-SVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDA 187
P YQ F PFL + E+YK E+ ++ +C +Y++K RL +E R YL
Sbjct: 197 KFPLKFYQGIFVSPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHP 256
Query: 188 KSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIR 247
S K+ + ++ M+A+H+ + +H + ++ ++ D+ MY L R V SGL +
Sbjct: 257 SSYTKVIHECQQRMVADHL-QFLHSECHSIIR---HERKNDMANMYVLLRAVSSGLPHMI 312
Query: 248 EVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSF 307
E + H+ + G + ++ + P FV+ +L+ K+ +I++ N D+ F +AL+ +
Sbjct: 313 EELQRHIHDEGLRATSNLTQEHMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKAL 372
Query: 308 EYFINLN-PRS----PEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFE 362
+N P+S PE ++ + D+ L+K KG++E +VE L + +F+Y+ +KDVF+
Sbjct: 373 TSVVNYREPKSVCKAPELLAKYCDNLLKKSAKGMTENEVEDKLTSFITVFKYIDDKDVFQ 432
Query: 363 KYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF-- 420
K+Y + LAKRL+ G ++S D+E ++I KLK CGY+FTSKL M+TDM S D ++F
Sbjct: 433 KFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNN 492
Query: 421 YASHPE----LGDSRTLVVQVLTTGSWP-TQ-PSVTCNLPAEMSALCEKFRSYYLGTHTG 474
+ + + LG S + VL G+WP TQ PS T +P E+ + F +Y +G
Sbjct: 493 FIRNQDTVIDLGIS--FQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSG 550
Query: 475 RRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
R+L+W + + ++K + G+ + V+TYQM VL+ FNN++ +SY+
Sbjct: 551 RKLTWLHYLCTGEVKMNY-LGKPYVAMVTTYQMAVLLAFNNSETVSYK 597
>TAIR|locus:2132377 [details] [associations]
symbol:CUL1 "cullin 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IPI] [GO:0009733 "response to
auxin stimulus" evidence=IMP] [GO:0009793 "embryo development
ending in seed dormancy" evidence=IMP] [GO:0005819 "spindle"
evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000794 "condensed nuclear
chromosome" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=IMP]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=TAS] [GO:0010265 "SCF complex assembly" evidence=IPI]
[GO:0042752 "regulation of circadian rhythm" evidence=RCA;IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0006486 "protein glycosylation" evidence=RCA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009790
"embryo development" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010431 "seed maturation" evidence=RCA]
[GO:0010564 "regulation of cell cycle process" evidence=RCA]
[GO:0043090 "amino acid import" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048316
"seed development" evidence=RCA] [GO:0048366 "leaf development"
evidence=IMP;RCA] [GO:0048825 "cotyledon development" evidence=RCA]
[GO:0051301 "cell division" evidence=RCA] [GO:0010087 "phloem or
xylem histogenesis" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005829
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0009873 GO:GO:0005819 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0042752 GO:GO:0009793 GO:GO:0016567 GO:GO:0007049
GO:GO:0000794 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 GO:GO:0000151 GO:GO:0009524 GO:GO:0009867
InterPro:IPR016159 SUPFAM:SSF74788 EMBL:AC002330 EMBL:AL161494
KO:K03347 HOGENOM:HOG000176712 EMBL:AJ318017 EMBL:AY046030
EMBL:AY133878 EMBL:AK222216 IPI:IPI00524614 PIR:T01092
RefSeq:NP_001031575.1 RefSeq:NP_001031576.1 RefSeq:NP_001190661.1
RefSeq:NP_567243.1 UniGene:At.24877 UniGene:At.67849
ProteinModelPortal:Q94AH6 SMR:Q94AH6 IntAct:Q94AH6 STRING:Q94AH6
PaxDb:Q94AH6 PRIDE:Q94AH6 EnsemblPlants:AT4G02570.1
EnsemblPlants:AT4G02570.2 EnsemblPlants:AT4G02570.3
EnsemblPlants:AT4G02570.4 GeneID:825648 KEGG:ath:AT4G02570
TAIR:At4g02570 InParanoid:Q94AH6 OMA:LDEGHEN PhylomeDB:Q94AH6
ProtClustDB:CLSN2689296 Genevestigator:Q94AH6 GermOnline:AT4G02570
GO:GO:0010265 Uniprot:Q94AH6
Length = 738
Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
Identities = 133/436 (30%), Positives = 244/436 (55%)
Query: 4 HKFGEKLYSGLVSTMTLHLKE-ISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYM 62
H + ++LY ++ + ++ L EL ++W++H ++ + Y+
Sbjct: 56 HDYSQQLYDKYREAFEEYINSTVLPALREKHDEFMLRELFKRWSNHKVMVRWLSRFFYYL 115
Query: 63 DRTYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNI 122
DR +I P++E+GL +RD + N++ +++ ++ LV +ER GE I+R L++N+
Sbjct: 116 DRYFIARRSLPPLNEVGLTCFRDLVY--NELHSKVKQAVIALVDKEREGEQIDRALLKNV 173
Query: 123 IKMLMDLGPSV---YQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEME 179
+ + +++G Y+EDFE L+ ++ +Y ++ +I+ C +Y+ K+E L +E E
Sbjct: 174 LDIYVEIGMGQMERYEEDFESFMLQDTSSYYSRKASSWIQEDSCPDYMLKSEECLKKERE 233
Query: 180 RVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRV 239
RV HYL + SE K+ V+ E++ +L+ ++SG +L DDK +DL RMY L+ ++
Sbjct: 234 RVAHYLHSSSEPKLVEKVQHELLVVFASQLLEKEHSGCRALLRDDKVDDLSRMYRLYHKI 293
Query: 240 PSGLLTIREVMTSHLRETGKQLVTDPE-----------RLKDPVEFVQRLLDEKDKYDNI 288
GL + + H+ G LV E +++ V ++++++ DKY
Sbjct: 294 LRGLEPVANIFKQHVTAEGNALVQQAEDTATNQVANTASVQEQV-LIRKVIELHDKYMVY 352
Query: 289 ISSAFNNDKTFQNALNSSFEYFIN---LNPRSPEFISLFVDDKLRKG-LKGVSEEDVETI 344
++ F N F AL +FE F N S E ++ F D+ L+KG + +S+E +E
Sbjct: 353 VTECFQNHTLFHKALKEAFEIFCNKTVAGSSSAELLATFCDNILKKGGSEKLSDEAIEDT 412
Query: 345 LDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLE 404
L+KV+ L Y+ +KD+F ++Y++ LA+RLL ++ +DD ERS++ KLK +CG QFTSK+E
Sbjct: 413 LEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKME 472
Query: 405 GMFTDMKTSQDTMHEF 420
GM TD+ +++ + F
Sbjct: 473 GMVTDLTLARENQNSF 488
Score = 477 (173.0 bits), Expect = 5.7e-45, P = 5.7e-45
Identities = 102/279 (36%), Positives = 163/279 (58%)
Query: 250 MTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEY 309
+ +T V + +++ V ++++++ DKY ++ F N F AL +FE
Sbjct: 315 LVQQAEDTATNQVANTASVQEQV-LIRKVIELHDKYMVYVTECFQNHTLFHKALKEAFEI 373
Query: 310 FIN---LNPRSPEFISLFVDDKLRKG-LKGVSEEDVETILDKVMMLFRYLQEKDVFEKYY 365
F N S E ++ F D+ L+KG + +S+E +E L+KV+ L Y+ +KD+F ++Y
Sbjct: 374 FCNKTVAGSSSAELLATFCDNILKKGGSEKLSDEAIEDTLEKVVKLLAYISDKDLFAEFY 433
Query: 366 KQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDM---KTSQDTMHEFYA 422
++ LA+RLL ++ +DD ERS++ KLK +CG QFTSK+EGM TD+ + +Q++ ++
Sbjct: 434 RKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQNSFEDYLG 493
Query: 423 SHPELGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTN 482
S+P L V VLTTG WP+ S NLP+EM E F+ +Y R+L+W +
Sbjct: 494 SNPAANPGIDLTVTVLTTGFWPSYKSFDINLPSEMIKCVEVFKGFYETKTKHRKLTWIYS 553
Query: 483 MGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSY 521
+G+ I F + + EL VSTYQ VL+LFN D+LSY
Sbjct: 554 LGTCHINGKFDQ-KAIELIVSTYQAAVLLLFNTTDKLSY 591
>DICTYBASE|DDB_G0267384 [details] [associations]
symbol:culB "cullin B" species:44689 "Dictyostelium
discoideum" [GO:0031286 "negative regulation of sorocarp stalk cell
differentiation" evidence=IGI;IMP] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 dictyBase:DDB_G0267384 GO:GO:0007275
GenomeReviews:CM000150_GR EMBL:AAFI02000003 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511 GO:GO:0031286
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 HSSP:Q13616 ProtClustDB:CLSZ2429454 EMBL:AF144717
RefSeq:XP_647212.1 ProteinModelPortal:Q9XZJ3 STRING:Q9XZJ3
EnsemblProtists:DDB0191260 GeneID:8616016 KEGG:ddi:DDB_G0267384
OMA:SECINYL Uniprot:Q9XZJ3
Length = 771
Score = 625 (225.1 bits), Expect = 4.3e-61, P = 4.3e-61
Identities = 146/472 (30%), Positives = 259/472 (54%)
Query: 71 HKTPVHE---LGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGL----MRNII 123
H V+E LGL +W++ + KI+ R+L + L+ ++R GE++ M ++I
Sbjct: 125 HPPDVYEIQILGLMIWKERLFF--KIKDRVLKCVEILIQKDRDGELVQHQFISQFMESLI 182
Query: 124 KM-LMDLGPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVT 182
K+ +D ++Y ++E +LE + +FY ES FI Y+KKAE R++EE +R
Sbjct: 183 KLDSVDKDRTLYLIEYEASYLENTRQFYTRESVAFIASSGISSYMKKAETRIDEEEQRSQ 242
Query: 183 HYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSG 242
YL++ S K+ ++ +I H L S +N L D+K +++ MY L R+ G
Sbjct: 243 KYLNSSSHDKMRRLLHSILIEKHKELL----QSECINYLKDEKLDEIYNMYKLLSRIEGG 298
Query: 243 LLTIREVMTSHLRETGKQLVTD-PERLK-DPVEFVQRLLDEKDKYDNIISSAFNNDKTFQ 300
L + E + +++ G + P+R DP +V+ LL ++ +II +FNND +F
Sbjct: 299 LAPVLETVQKYIQHVGIDAIKSIPDRNNPDPKIYVETLLKIYLQFSSIIKKSFNNDVSFI 358
Query: 301 NALNSSFEYFINLN------PRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRY 354
L+ + N N +SPE ++ + D L+KG K E ++E L ++++LF+Y
Sbjct: 359 TVLDLACHKIFNQNHITRNTTKSPELLAKYCDMLLKKGNKQHEEIELEEKLGQIIVLFKY 418
Query: 355 LQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQ 414
+ +KDVF+K+Y + L++RL++G +VSDD E+ +I LK CG+++TSK + MF D+ S
Sbjct: 419 VDDKDVFQKFYSKMLSRRLINGTSVSDDIEKFMITGLKQACGFEYTSKFQRMFNDITLSA 478
Query: 415 DTMHEF--YASHPELGDSRT-LVVQVLTTGSWPTQPSVTCNL-PAEMSALCEKFRSYYLG 470
+T EF + L + + VLT+GSW + + P E++ F+ YY
Sbjct: 479 ETNEEFKNHLIKNSLSIGKIDFSILVLTSGSWSLHSQTSSFIVPQELTLCISAFQQYYST 538
Query: 471 THTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
H GR+L+W ++ A+ K+ F K + ++ V+ +Q+ +L++FN + +S +
Sbjct: 539 QHQGRKLNWLHHLCKAEAKSFFAK-KSYDFQVTNFQLGILLIFNTQESVSLE 589
>UNIPROTKB|G4N0J9 [details] [associations]
symbol:MGG_07731 "Cullin-3" species:242507 "Magnaporthe
oryzae 70-15" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001373
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 EMBL:CM001233
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03869
RefSeq:XP_003712937.1 ProteinModelPortal:G4N0J9
EnsemblFungi:MGG_07731T0 GeneID:2683658 KEGG:mgr:MGG_07731
Uniprot:G4N0J9
Length = 830
Score = 347 (127.2 bits), Expect = 5.5e-61, Sum P(3) = 5.5e-61
Identities = 74/193 (38%), Positives = 118/193 (61%)
Query: 272 VEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRK 331
+++V +LD + K+D I +F D Q + F FI+ RS EF+SL++D+ L++
Sbjct: 395 IKWVHDVLDLRAKFDVIWEKSFAQDPGLQTTMTKGFSDFIHQFGRSSEFVSLYIDENLKR 454
Query: 332 GLKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKL 391
G++G S+ +V ILD+ +++ RYL++KD+FE+YY++HL +RLL + S++AE+ LI +
Sbjct: 455 GIRGKSDLEVTAILDRSIVMIRYLKDKDLFERYYQKHLGRRLLHSRASSEEAEKQLITMM 514
Query: 392 KTECGYQFTSKLEGMFTDMKTSQDTMHEFYASH-PELGDSRT------LVVQVLTTGSWP 444
+ E G FTSK EGMF D+ S++ + Y H LGD L + VLT+ SWP
Sbjct: 515 QLELGKHFTSKFEGMFKDITISEELSTK-YGEHIRSLGDVDVHHKPIDLAISVLTSNSWP 573
Query: 445 TQPSVTCNLPAEM 457
P V PA++
Sbjct: 574 --PDVM-GRPAQV 583
Score = 225 (84.3 bits), Expect = 5.5e-61, Sum P(3) = 5.5e-61
Identities = 58/155 (37%), Positives = 86/155 (55%)
Query: 97 LLNT-LLELVHRERTGEVINRGLMRNIIKMLMDL--------GPSVYQEDFEKPFLEVSA 147
+L+T +L+ + ER G+VINR L+ + +KML DL +Y FE LE S
Sbjct: 181 ILSTVILDHIDMEREGDVINRSLIHSCVKMLEDLYETDEEMDADRLYLVRFEPHLLEASR 240
Query: 148 EFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMP 207
FY+ E+ K + D ++++ RRL EE +R L S K+T VE E+I+ H+
Sbjct: 241 TFYRSEALKLLRNGDASIWIRQTHRRLLEEEDRCKTTLSTLSIEKMTRAVEAELISAHLN 300
Query: 208 RLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRV-PS 241
+ ++N+GL ML DD+ EDL +Y L RV PS
Sbjct: 301 DFLALENNGLRQMLDDDRVEDLAILYQLVARVDPS 335
Score = 170 (64.9 bits), Expect = 3.1e-55, Sum P(3) = 3.1e-55
Identities = 40/132 (30%), Positives = 76/132 (57%)
Query: 34 GGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPSTHKTPVHELGLNLWRDNIVRSNKI 93
G +F++ L W +H ++ M+ DILMY+D+ ++ + T + + L+RD++V N +
Sbjct: 110 GDTFMKGLKEAWENHRMSMNMVADILMYLDKGFLKESRGTSIFVTTIGLFRDHLVNPNTV 169
Query: 94 --QTR------LLNT-LLELVHRERTGEVINRGLMRNIIKMLMDLGPSVYQEDFEKPFLE 144
R +L+T +L+ + ER G+VINR L+ + +KML DL + + D ++ +L
Sbjct: 170 VGHDRTFSLFDILSTVILDHIDMEREGDVINRSLIHSCVKMLEDLYETDEEMDADRLYL- 228
Query: 145 VSAEFYKVESQK 156
V E + +E+ +
Sbjct: 229 VRFEPHLLEASR 240
Score = 164 (62.8 bits), Expect = 5.5e-61, Sum P(3) = 5.5e-61
Identities = 47/121 (38%), Positives = 64/121 (52%)
Query: 433 LVVQVLTTGSWPTQ--------------PSVTCNLPAEMSALCEKFRSYYLGTHTGRRLS 478
L + VLT+ SWP P+V CN P E+ L + F +YL +GR L+
Sbjct: 562 LAISVLTSNSWPPDVMGRPAQVGRGDGPPAVDCNYPPEIKRLQDSFFKFYLKDRSGRVLT 621
Query: 479 WQTNMGSADIKATFG--KG--------QKHELNVSTYQMCVLMLFNN---ADRLSYQGNR 525
W + GSADIK F KG +++ELNVSTY M VLMLFN+ + LS++ +
Sbjct: 622 WIGSAGSADIKCVFPPVKGMSGPLSRERRYELNVSTYGMVVLMLFNSLEDGETLSFEDIQ 681
Query: 526 A 526
A
Sbjct: 682 A 682
Score = 42 (19.8 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 13/47 (27%), Positives = 24/47 (51%)
Query: 8 EKLYSGLVSTMTLHL-KEISKSIEAA-QGGSFLEELNRKWNDHNKAL 52
E+ L++ M L L K + E + + EEL+ K+ +H ++L
Sbjct: 504 EEAEKQLITMMQLELGKHFTSKFEGMFKDITISEELSTKYGEHIRSL 550
>POMBASE|SPAC17G6.12 [details] [associations]
symbol:cul1 "cullin 1" species:4896 "Schizosaccharomyces
pombe" [GO:0005829 "cytosol" evidence=IDA] [GO:0007346 "regulation
of mitotic cell cycle" evidence=IC] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IDA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IMP] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IC] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 PomBase:SPAC17G6.12 GO:GO:0005829 GO:GO:0007346
EMBL:CU329670 GO:GO:0051301 GenomeReviews:CU329670_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007049 GO:GO:0019005
SUPFAM:SSF75632 GO:GO:0032876 GO:GO:0042787 InterPro:IPR016159
SUPFAM:SSF74788 HOGENOM:HOG000176713 KO:K03347 OMA:SGVINCY
OrthoDB:EOG4W3WW4 EMBL:AB016896 EMBL:AB027897 PIR:T37844 PIR:T43398
RefSeq:NP_594259.1 ProteinModelPortal:O13790 IntAct:O13790
MINT:MINT-3377010 STRING:O13790 EnsemblFungi:SPAC17G6.12.1
GeneID:2542393 KEGG:spo:SPAC17G6.12 NextBio:20803452 Uniprot:O13790
Length = 767
Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
Identities = 144/407 (35%), Positives = 219/407 (53%)
Query: 132 SVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEA 191
S Y+ FE F+E + FY ES +++ +YLKKAE RL EE E V YL +
Sbjct: 219 SSYKTFFETNFIENTKNFYAKESSEYLASHSITDYLKKAEIRLAEEEELVRLYLHESTLK 278
Query: 192 KITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREVMT 251
+ E +IA H ++H D ML + ED+ RMY L R P+GL +R+
Sbjct: 279 PLLEATEDVLIAQH-EEVLHND---FARMLDQNCSEDIIRMYRLMSRTPNGLQPLRQTFE 334
Query: 252 SHLRETGKQLVTD--P----ERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNS 305
++ +G V P E DP E+++ LL ++++AF+ D F +L++
Sbjct: 335 EFVKRSGFAAVAKIVPQVGGEADVDPKEYMEMLLSTYKASKELVNTAFHGDTDFTKSLDT 394
Query: 306 SFEYFINLN-------PRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEK 358
+F +N N RSPE ++ + D LRK K V +DVE L ++++FRY+++K
Sbjct: 395 AFRELVNRNVVCQRSSSRSPELLAKYADSILRKSNKNVDIDDVEDCLSSIIIIFRYVEDK 454
Query: 359 DVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMH 418
DVF+ +Y + LAKRL++G + S DAE S++ KLK CG+++TSKL+ MF D+ SQ+
Sbjct: 455 DVFQNFYTKLLAKRLVNGTSNSQDAESSMLSKLKEVCGFEYTSKLQRMFQDISLSQEITE 514
Query: 419 EFYASHPELGDSRTLVVQVLTTGSWPTQPS-VTCNLPAEMSALCEKFRSYYLGTHTGRRL 477
F+ + VL T WP P+ V +LP E+ L E F++YY H GR+L
Sbjct: 515 AFWQLPQSRAGNIDFSALVLGTSFWPLSPNNVNFHLPEELVPLYEGFQNYYYSCHNGRKL 574
Query: 478 SWQTNMGSADIKATFGKGQK--HELNVSTYQMCVLMLFNNADRLSYQ 522
SW ++ +IKA + VSTYQM VL+L+N+ D +Y+
Sbjct: 575 SWLFHLSKGEIKARINPQTNVTYVFQVSTYQMGVLLLYNHRDSYTYE 621
Score = 201 (75.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 71/269 (26%), Positives = 120/269 (44%)
Query: 7 GEKLYSGLVSTMTLHLKEISKS-IEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRT 65
GE LY+ LV + +L + K I L + W + + I + Y++R
Sbjct: 79 GEALYNNLVLYLEEYLARLRKECISQTNHEEQLAAYAKYWTRFTTSARFINHLFGYLNRY 138
Query: 66 YIPSTHK---TPVHE---LGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLM 119
++ ++ T V++ L L W ++ + I+ LL LL + ++R E + +
Sbjct: 139 WVKLKNRFTETLVYDIYTLCLVSWHHHVF--SHIRDSLLQNLLYMFTKKRLYEPTDMKYV 196
Query: 120 RNIIKMLMDLG--------PSV--YQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKK 169
+ + L P++ Y+ FE F+E + FY ES +++ +YLKK
Sbjct: 197 EVCVDSITSLSFDKTDMTKPNLSSYKTFFETNFIENTKNFYAKESSEYLASHSITDYLKK 256
Query: 170 AERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDL 229
AE RL EE E V YL + + E +IA H ++H D ML + ED+
Sbjct: 257 AEIRLAEEEELVRLYLHESTLKPLLEATEDVLIAQH-EEVLHND---FARMLDQNCSEDI 312
Query: 230 GRMYNLFRRVPSGLLTIREVMTSHLRETG 258
RMY L R P+GL +R+ ++ +G
Sbjct: 313 IRMYRLMSRTPNGLQPLRQTFEEFVKRSG 341
>FB|FBgn0015509 [details] [associations]
symbol:lin19 "lin-19-like" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IGI] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 EMBL:AE013599 GO:GO:0007095 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 HOGENOM:HOG000021491 GO:GO:0006511
GO:GO:0019005 eggNOG:COG5647 SUPFAM:SSF75632 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 KO:K03347 EMBL:L41642
EMBL:AF136343 EMBL:BT010290 RefSeq:NP_523655.1 RefSeq:NP_724621.1
RefSeq:NP_724622.1 RefSeq:NP_724623.1 UniGene:Dm.7926
ProteinModelPortal:Q24311 SMR:Q24311 DIP:DIP-19461N IntAct:Q24311
MINT:MINT-989395 STRING:Q24311 PaxDb:Q24311
EnsemblMetazoa:FBtr0088845 EnsemblMetazoa:FBtr0088846
EnsemblMetazoa:FBtr0088847 EnsemblMetazoa:FBtr0088848 GeneID:35742
KEGG:dme:Dmel_CG1877 UCSC:CG1877-RA CTD:35742 FlyBase:FBgn0015509
InParanoid:Q24311 OMA:NECIAES OrthoDB:EOG42280P PhylomeDB:Q24311
GenomeRNAi:35742 NextBio:794991 Bgee:Q24311 GermOnline:CG1877
Uniprot:Q24311
Length = 774
Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
Identities = 140/413 (33%), Positives = 225/413 (54%)
Query: 132 SVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVT--------H 183
SVY+++FE F+ ++ FY+ ES F+ EYLK E RL EE +RV
Sbjct: 217 SVYKQNFENKFIADTSAFYEKESDAFLSTNTVTEYLKHVENRLEEETQRVRGFNSKNGLS 276
Query: 184 YLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGL 243
YL + + + E+ +I H+ ++ H + L+N D+ +DL RMY+L L
Sbjct: 277 YLHETTADVLKSTCEEVLIEKHL-KIFHTEFQNLLNA---DRNDDLKRMYSLVALSSKNL 332
Query: 244 LTIREVMTSHLRETGKQLVTD---PERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQ 300
++ ++ +H+ G + + + DP +VQ +LD KY+ ++ +AFNND F
Sbjct: 333 TDLKSILENHILHQGTEAIAKCCTTDAANDPKTYVQTILDVHKKYNALVLTAFNNDNGFV 392
Query: 301 NALNSSFEYFINLN--------PRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLF 352
AL+ + FIN N +SPE ++ + D L+K K ++++E L++VM++F
Sbjct: 393 AALDKACGKFINSNVVTIANSASKSPELLAKYCDLLLKKSSKNPEDKELEDNLNQVMVVF 452
Query: 353 RYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKT 412
+Y+++KDVF+KYY + LAKRL++ + SDDAE +I KLK CGY++T KL+ MF D+
Sbjct: 453 KYIEDKDVFQKYYSKMLAKRLVNHTSASDDAEAMMISKLKQTCGYEYTVKLQRMFQDIGV 512
Query: 413 SQDTMHEF--YASHPELGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLG 470
S+D F Y + L ++VL++GSWP Q S LP+E+ +F +Y
Sbjct: 513 SKDLNSYFKQYLAEKNLTMEIDFGIEVLSSGSWPFQLSNNFLLPSELERSVRQFNEFYAA 572
Query: 471 THTGRRLSWQTNM--GSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSY 521
H+GR+L+W M G + + L ST+QM VL+ FN D+LS+
Sbjct: 573 RHSGRKLNWLYQMCKGELIMNVNRNNSSTYTLQASTFQMSVLLQFN--DQLSF 623
Score = 227 (85.0 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 64/280 (22%), Positives = 134/280 (47%)
Query: 7 GEKLYSGLVSTMTLHLKEISKSIEAAQGGS-FLEELNRKWNDHNKALQMIRDILMYMDRT 65
G+KLY L + +L E+ +A G L ++W + + ++ I Y++R
Sbjct: 75 GKKLYDRLEQFLKSYLSELLTKFKAISGEEVLLSRYTKQWKSYQFSSTVLDGICNYLNRN 134
Query: 66 YIPSTHKT------PVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLM 119
++ + ++ L L W+ ++ + + + +L+ + ER G++INR L+
Sbjct: 135 WVKRECEEGQKGIYKIYRLALVAWKGHLFQV--LNEPVTKAVLKSIEEERQGKLINRSLV 192
Query: 120 RNIIKMLMDLG------------PSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYL 167
R++I+ ++L SVY+++FE F+ ++ FY+ ES F+ EYL
Sbjct: 193 RDVIECYVELSFNEEDTDAEQQKLSVYKQNFENKFIADTSAFYEKESDAFLSTNTVTEYL 252
Query: 168 KKAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLV---HMD--NSGLVNMLL 222
K E RL EE +RV + ++K+ + +++ + ++ H+ ++ N+L
Sbjct: 253 KHVENRLEEETQRVRGF-NSKNGLSYLHETTADVLKSTCEEVLIEKHLKIFHTEFQNLLN 311
Query: 223 DDKYEDLGRMYNLFRRVPSGLLTIREVMTSHLRETGKQLV 262
D+ +DL RMY+L L ++ ++ +H+ G + +
Sbjct: 312 ADRNDDLKRMYSLVALSSKNLTDLKSILENHILHQGTEAI 351
Score = 49 (22.3 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 23/98 (23%), Positives = 45/98 (45%)
Query: 346 DKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTV-SDDAERSLIVKLKTECGYQFTSKL- 403
D++ + LQ+ ++ + + LL K + S D E SL + E + +K
Sbjct: 619 DQLSFTVQQLQDNTQTQQENLIQVLQILLKAKVLTSSDNENSLTPESTVELFLDYKNKKR 678
Query: 404 -----EGMFTDMKTSQDTMHEFYASHPELGDSRTLVVQ 436
+ + T++K Q+T+H+ H E + R L++Q
Sbjct: 679 RININQPLKTELKVEQETVHK----HIE--EDRKLLIQ 710
>FB|FBgn0032956 [details] [associations]
symbol:Cul-2 "Cullin-2" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:0007295 "growth of a germarium-derived egg chamber"
evidence=IMP] [GO:0008582 "regulation of synaptic growth at
neuromuscular junction" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 EMBL:AE014134 GO:GO:0022008
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031461 GO:GO:0008582 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0007295
HSSP:Q9JLV5 CTD:35420 KO:K03870 OMA:VMLDYVE EMBL:AY061434
RefSeq:NP_610117.1 RefSeq:NP_724352.1 UniGene:Dm.6467 SMR:Q9V9R2
IntAct:Q9V9R2 MINT:MINT-904022 STRING:Q9V9R2
EnsemblMetazoa:FBtr0085899 EnsemblMetazoa:FBtr0085900 GeneID:35420
KEGG:dme:Dmel_CG1512 UCSC:CG1512-RA FlyBase:FBgn0032956
InParanoid:Q9V9R2 OrthoDB:EOG4HDR8R GenomeRNAi:35420 NextBio:793437
Uniprot:Q9V9R2
Length = 753
Score = 551 (199.0 bits), Expect = 2.9e-56, Sum P(2) = 2.9e-56
Identities = 152/542 (28%), Positives = 271/542 (50%)
Query: 29 IEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPSTHKTPVHELGLNLWRDNIV 88
+E +QG +L +L N + Q I D + + + + ELGL++WR ++
Sbjct: 101 MEYSQGIKYLHQLYIYLNQQHIKKQKITDTESFYGNLSSDAAEQMEIGELGLDIWRLYMI 160
Query: 89 RSNKIQTRLLNTLLELVHRERTG---------EVINRGLMRNIIKM--LMDLGP-SVYQE 136
+ + L+ +LE + +R ++IN G++ + +++ G +YQE
Sbjct: 161 EY--LSSELVRHILEGIAADRASNGTLDHHRVQIIN-GVIHSFVEVQDYKKTGSLKLYQE 217
Query: 137 DFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAKITNV 196
FE P LE S +Y E+ K + C EY+++ R L E R +L S K+
Sbjct: 218 LFEGPMLEASGAYYTDEANKLLHRCSVSEYMQEVIRILEYESRRAQKFLHVSSLPKLRKE 277
Query: 197 VEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREVMTS---H 253
E++ I + + + S M+ +++ +DL MY + + +P L + E++T+ H
Sbjct: 278 CEEKFINDRLGFIY----SECREMVSEERRQDLRNMYVVLKPIPDNLKS--ELITTFLDH 331
Query: 254 LRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEYFINL 313
++ G Q V+ + + FV+ +L KY +I+ F ND F +AL+ + IN
Sbjct: 332 IKSEGLQTVSALKGENIHIAFVENMLKVHHKYQELIADVFENDSLFLSALDKACASVINR 391
Query: 314 NP------RSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQ 367
P RS E+++ + D L+K E +++ L + +F+Y+++KDV++K+Y +
Sbjct: 392 RPTERQPCRSAEYVAKYCDTLLKKSK--TCEAEIDQKLTNNITIFKYIEDKDVYQKFYSR 449
Query: 368 HLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEFYA----S 423
LAKRL+ ++ S DAE +I +LK CGY+FT+KL MFTD+ S D ++F S
Sbjct: 450 LLAKRLIHEQSQSMDAEEGMINRLKQACGYEFTNKLHRMFTDISVSVDLNNKFNTHLKDS 509
Query: 424 HPELGDSRTLVVQVLTTGSWPTQPS--VTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQT 481
+ +LG + L ++VL G+WP + + +P E + F YY +GR+L+W
Sbjct: 510 NVDLGIN--LAIKVLQAGAWPLGSTQVIPFAVPQEFEKSIKMFEDYYHKLFSGRKLTWLH 567
Query: 482 NMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQG--NRAGNRDSCFRLEKVP 539
+M ++K + K + + + + TYQM +++LF D LS + N D F+ P
Sbjct: 568 HMCHGELKLSHLK-KSYIVTMQTYQMAIILLFETCDSLSCREIQNTLQLNDETFQKHMQP 626
Query: 540 AI 541
I
Sbjct: 627 II 628
Score = 46 (21.3 bits), Expect = 2.9e-56, Sum P(2) = 2.9e-56
Identities = 17/86 (19%), Positives = 39/86 (45%)
Query: 8 EKLYSGLVSTMTLHLKE-ISKS--IEA----AQGG-SFLEELNRKWNDHNKALQMIRDIL 59
++LY + H++E ++K IE + GG L+ W ++++ ++ + +
Sbjct: 55 DRLYGETKHFLEQHVQEMLAKKVLIEGECSHSNGGPDLLQRYYITWMEYSQGIKYLHQLY 114
Query: 60 MYMDRTYIPSTHKTPVHELGLNLWRD 85
+Y+++ +I T NL D
Sbjct: 115 IYLNQQHIKKQKITDTESFYGNLSSD 140
>UNIPROTKB|G3N0Q3 [details] [associations]
symbol:G3N0Q3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:NDYHERS EMBL:DAAA02010429
PRIDE:G3N0Q3 Ensembl:ENSBTAT00000063692 NextBio:20878225
Uniprot:G3N0Q3
Length = 767
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 132/406 (32%), Positives = 219/406 (53%)
Query: 132 SVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEA 191
+VY+E FE FL + +Y +S + ++ EY+KK E L EE R YL S+
Sbjct: 217 TVYKEAFESQFLADTERYYTRKSTELLQQNPVTEYMKKVEALLLEERRRARVYLHQSSKG 276
Query: 192 KITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREVMT 251
K+ + ++ H+ + + N+L +K EDLGRMY L R+ +GL ++++
Sbjct: 277 KLARKCRQVLVEKHLEIFL----TEFQNLLNANKSEDLGRMYRLIYRIKNGLGEFKKILE 332
Query: 252 SHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEY 309
+H+ G + + L DP +V+ +L+ KY+ ++ SAF N F AL+ +
Sbjct: 333 THIHNQGLSAIEECGEAALNDPRMYVETVLNIHKKYNALVISAFRNHADFVAALDKACSG 392
Query: 310 FINLNP---------RSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDV 360
FIN N +SPE ++ + D L+K K E ++E L+ VM +F+Y+ +KDV
Sbjct: 393 FINNNAVTKMAQSSSKSPELLAQYCDSLLKKSSKNPEEAELEDTLNHVMTVFKYMDDKDV 452
Query: 361 FEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF 420
+K+Y + LAKRL+ + SDDAE S++ KLK CG+++TSKL+ MF D+ S+ ++
Sbjct: 453 VQKFYTKMLAKRLVHQNSASDDAEASMVSKLKQACGFEYTSKLQRMFQDIGVSK-ALNAQ 511
Query: 421 YASHPELGDSRTL----VVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRR 476
+ H L DS L + VL+ G WP + S T LP+E+ +F ++Y ++ R+
Sbjct: 512 FKKH--LMDSEPLDLDFSIHVLSYGWWPFEESCTVLLPSELEPCYRRFTAFYASCYSDRK 569
Query: 477 LSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
LSW + ++ + K + L VST+QM +L+ +N D + Q
Sbjct: 570 LSWAYQLSEGELVTNYFKNN-YTLRVSTFQMAILLQYNTEDAYTIQ 614
Score = 328 (120.5 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 90/327 (27%), Positives = 159/327 (48%)
Query: 7 GEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTY 66
G +LY + + HL + K E L+ ++W D+ + +++ I +++
Sbjct: 77 GFELYKRIKEFLKNHLTNLPKDGEDLMDIGILKFYTQQWEDYQFSSKVLNGICARLNKHL 136
Query: 67 IPST----HKT-PVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRN 121
+ ST H ++ L + WRD + R + ++ N +L+L+ +ER GE IN L+
Sbjct: 137 LNSTNNEGHNVCEIYSLAMVTWRDCLFRP--LNKQVTNAVLKLIEKERNGESINTRLISG 194
Query: 122 IIKMLMDLG----------P--SVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKK 169
I+ ++LG P +VY+E FE FL + +Y +S + ++ EY+KK
Sbjct: 195 AIQSYLELGVNEDNQFEESPMLTVYKEAFESQFLADTERYYTRKSTELLQQNPVTEYMKK 254
Query: 170 AERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDL 229
E L EE R YL S+ K+ + ++ H+ + + N+L +K EDL
Sbjct: 255 VEALLLEERRRARVYLHQSSKGKLARKCRQVLVEKHLEIFL----TEFQNLLNANKSEDL 310
Query: 230 GRMYNLFRRVPSGLLTIREVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYDN 287
GRMY L R+ +GL ++++ +H+ G + + L DP +V+ +L+ KY+
Sbjct: 311 GRMYRLIYRIKNGLGEFKKILETHIHNQGLSAIEECGEAALNDPRMYVETVLNIHKKYNA 370
Query: 288 IISSAFNNDKTFQNALNSSFEYFINLN 314
++ SAF N F AL+ + FIN N
Sbjct: 371 LVISAFRNHADFVAALDKACSGFINNN 397
>WB|WBGene00000836 [details] [associations]
symbol:cul-1 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040015 "negative regulation of
multicellular organism growth" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0007067
"mitosis" evidence=IMP] [GO:0008406 "gonad development"
evidence=IMP] [GO:0016477 "cell migration" evidence=IMP]
[GO:0045930 "negative regulation of mitotic cell cycle"
evidence=IMP] [GO:0008361 "regulation of cell size" evidence=IMP]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0043066 GO:GO:0008285
GO:GO:0051301 GO:GO:0016477 GO:GO:0008406 GO:GO:0007067
GO:GO:0002119 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006974
GO:GO:0008361 GO:GO:0016567 GO:GO:0040015 GO:GO:0006511
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 GO:GO:0045930
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176713 KO:K03347 OMA:LDEGHEN EMBL:U58083 EMBL:Z35639
PIR:T20365 RefSeq:NP_499309.1 UniGene:Cel.6661
ProteinModelPortal:Q17389 SMR:Q17389 STRING:Q17389 PaxDb:Q17389
EnsemblMetazoa:D2045.6 GeneID:176466 KEGG:cel:CELE_D2045.6
UCSC:D2045.6 CTD:176466 WormBase:D2045.6 InParanoid:Q17389
NextBio:892698 Uniprot:Q17389
Length = 780
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 135/404 (33%), Positives = 224/404 (55%)
Query: 132 SVYQEDFEKPFLEVSAEFYKVESQKFIECC-DCGEYLKKAERRLNEEMERVTHYLDAKSE 190
+VY+E FE FLE + FY E+ F+ + +Y+ K E RLN+E +R YL++ ++
Sbjct: 226 AVYKEFFEVKFLEATRGFYTQEAANFLSNGGNVTDYMIKVETRLNQEDDRCQLYLNSSTK 285
Query: 191 AKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREVM 250
+ E +I+N + L + G +L+D + +DL RM+ L RVP+GL +R+ +
Sbjct: 286 TPLATCCESVLISNQLDFLQR--HFG--GLLVDKRDDDLSRMFKLCDRVPNGLDELRKSL 341
Query: 251 TSHLRETGKQLV--TDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFE 308
+H+ + G Q + E D +V+ LL+ ++Y ++++ +F N+ F +L+ +
Sbjct: 342 ENHIAKEGHQALERVAMEAATDAKLYVKTLLEVHERYQSLVNRSFKNEPGFMQSLDKAAT 401
Query: 309 YFINLNP---RSP---------EFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQ 356
FIN N R+P E ++ + D LRK K E ++E + K+M++F+Y+
Sbjct: 402 SFINNNAVTKRAPPQAQLTKSAELLARYCDQLLRKSSKMPDEAELEELQTKIMVVFKYID 461
Query: 357 EKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDT 416
+KDVF K+Y + +KRL+S + SD+AE + I KLK+ CGY++T++L M D + S+D
Sbjct: 462 DKDVFSKFYTKMFSKRLISELSASDEAEANFITKLKSMCGYEYTARLSKMVNDTQVSKDL 521
Query: 417 MHEFYASHPE-LGD-SRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTG 474
+F + LG S V VL++GSWPT P+ LP ++S E F +Y G
Sbjct: 522 TADFKEKKADMLGQKSVEFNVLVLSSGSWPTFPTTPITLPQQLSKTIEIFGQFYNEKFNG 581
Query: 475 RRLSWQTNMGSADIKAT-FGKGQKHELNVSTYQMCVLMLFNNAD 517
RRL+W + +I +T F K K+ +T QMC ++LFN D
Sbjct: 582 RRLTWVYSQSRGEITSTAFPK--KYVFTATTAQMCTMLLFNEQD 623
Score = 245 (91.3 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 81/335 (24%), Positives = 164/335 (48%)
Query: 7 GEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTY 66
G ++Y + + ++ + + G L+ +W + + +++ I Y++R +
Sbjct: 81 GHEMYQRVEEYVKAYVIAVCEKGAELSGEDLLKYYTTEWENFRISSKVMDGIFAYLNRHW 140
Query: 67 I----PSTHKT--PVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR 120
I H+ V+ L L +W+ N+ N ++ ++++ +LEL+ ERTG +IN +
Sbjct: 141 IRRELDEGHENIYMVYTLALVVWKRNLF--NDLKDKVIDAMLELIRSERTGSMINSRYIS 198
Query: 121 NIIKMLMDLGPSVYQEDFEKPF----LEVSAEFYKVESQKFIECCDCGEYLKKAERRLNE 176
+++ L++LG + D +K L V EF++V KF+E G Y ++A L+
Sbjct: 199 GVVECLVELGVDDSETDAKKDAETKKLAVYKEFFEV---KFLEATR-GFYTQEAANFLSN 254
Query: 177 EMERVTHYLDAKSEAKITNVVEK-EMIANHMPR--LVHMDNSGLVN------------ML 221
VT Y+ K E ++ ++ ++ N + L S L++ +L
Sbjct: 255 G-GNVTDYM-IKVETRLNQEDDRCQLYLNSSTKTPLATCCESVLISNQLDFLQRHFGGLL 312
Query: 222 LDDKYEDLGRMYNLFRRVPSGLLTIREVMTSHLRETGKQLV--TDPERLKDPVEFVQRLL 279
+D + +DL RM+ L RVP+GL +R+ + +H+ + G Q + E D +V+ LL
Sbjct: 313 VDKRDDDLSRMFKLCDRVPNGLDELRKSLENHIAKEGHQALERVAMEAATDAKLYVKTLL 372
Query: 280 DEKDKYDNIISSAFNNDKTFQNALNSSFEYFINLN 314
+ ++Y ++++ +F N+ F +L+ + FIN N
Sbjct: 373 EVHERYQSLVNRSFKNEPGFMQSLDKAATSFINNN 407
>WB|WBGene00000839 [details] [associations]
symbol:cul-4 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0006260 "DNA replication" evidence=IMP]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0008340 GO:GO:0002009 GO:GO:0040010 GO:GO:0006260
GO:GO:0040011 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0040035 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K10609 EMBL:FO080734 EMBL:U58086
PIR:T16367 RefSeq:NP_495525.2 ProteinModelPortal:Q17392 SMR:Q17392
IntAct:Q17392 STRING:Q17392 PaxDb:Q17392 EnsemblMetazoa:F45E12.3
GeneID:174198 KEGG:cel:CELE_F45E12.3 UCSC:F45E12.3 CTD:35780
WormBase:F45E12.3 InParanoid:Q17392 OMA:ERIFCSS NextBio:882965
Uniprot:Q17392
Length = 840
Score = 570 (205.7 bits), Expect = 5.9e-55, P = 5.9e-55
Identities = 159/532 (29%), Positives = 266/532 (50%)
Query: 10 LYSGLVSTMTLHLKEISKSIEAAQG--------GSFLEELNRKWNDHNKALQMIRDILMY 61
LY LV+ + K + +S+ A + +LE+ + W + + +IR+I ++
Sbjct: 161 LYDRLVAIVVQFAKSLKESLNAVEQVPLAEDNCEQYLEKFGQIWQAYPVKINLIRNIFLH 220
Query: 62 MDRTYIPSTHKT--PVHELGLNLWRD----NIVRSNKIQTRLLNTLLELVHRERTGEVIN 115
+DR + +T P+ E + +++ NI + K T+L N L + + ++
Sbjct: 221 LDRIALGATDTEILPLWECFMQIFQKTFFPNIFKEFKA-TKLFNALYMAMQK-----IMQ 274
Query: 116 RGLMRNIIKMLMDLGPSVY-QEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRL 174
R + + ++ L+D+ +V+ E+F K + E Y E + +C +Y++ E ++
Sbjct: 275 RYPVDSPLRSLVDMLQTVHVSEEFAKFLISQLREHYNNERIDKVPKMNCNDYMEYCEDQI 334
Query: 175 NEEMERVTHYLDAKSEAK-ITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMY 233
N + V D S K + V +I +P ++ D L++ D D+GRM+
Sbjct: 335 NRYSQLVKVNFDEPSALKDVQATVTNCLIQQAIPEILTHDFDDLID---SDNISDIGRMF 391
Query: 234 NLFRRVPSGLLTIREVMTSHLRETGKQLV-TDPERLKDPVEFVQRLLDEKDKYDNIISSA 292
NL R+ G +R + +L++ G++L+ T P+ + V LL K K D I++ +
Sbjct: 392 NLCRQCVGGEDEVRTQFSKYLKKRGEKLIATCPDE-----DLVSELLAFKKKVDFIMTGS 446
Query: 293 FN--NDKT-FQNALNSSFEYFINLN-PRSPEFISLFVDDKLRKGLKGVSEED-VETILDK 347
F ND + L+ +FE F+N RS E IS L K VS++ ++ ++D+
Sbjct: 447 FKSANDPVKMRQCLSDAFESFVNKQVDRSAELISKHFHTLLHSSNKNVSDDTTLDQMVDE 506
Query: 348 VMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMF 407
++LFRYL+ KDVFE YYK+ LAKRL ++ S DAE+ ++ KLKTECG FT KLEGMF
Sbjct: 507 AIVLFRYLRGKDVFEAYYKRGLAKRLFLERSASVDAEKMVLCKLKTECGSAFTYKLEGMF 566
Query: 408 TDMKTSQDTMHEF--YASHPELGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFR 465
DM S++ F Y H + +V+T WPT + N+P EM ++
Sbjct: 567 KDMDASENYGRLFNQYLEHMNK-EKANFTARVITPEYWPTYDTYEINIPKEMRDTLTDYQ 625
Query: 466 SYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNAD 517
+Y H R + W + SA I A+F G K EL + YQ +L+LFN +
Sbjct: 626 DFYRVQHGNRNVKWHHGLASAVISASFRPGCKKELIATMYQTVILLLFNKCE 677
>DICTYBASE|DDB_G0278991 [details] [associations]
symbol:culE "cullin E" species:44689 "Dictyostelium
discoideum" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001373 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
dictyBase:DDB_G0278991 GenomeReviews:CM000152_GR EMBL:AAFI02000026
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 HSSP:Q9JLV5 RefSeq:XP_641893.1
ProteinModelPortal:Q54XF7 PRIDE:Q54XF7 EnsemblProtists:DDB0266744
GeneID:8621819 KEGG:ddi:DDB_G0278991 OMA:AETLMIN Uniprot:Q54XF7
Length = 750
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 146/476 (30%), Positives = 254/476 (53%)
Query: 71 HKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLG 130
+++ V+ LN WR+ N ++ +L +LL+++ +RTG N ++ + ++ + LG
Sbjct: 127 NESVVYSDTLNSWRETAF--NPLKNKLSVSLLQIIKNDRTGFSTNLQVLSDSLECYVQLG 184
Query: 131 PS-----VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYL 185
P +YQ FE+ FL+ + FYK ES FIE EY++ R+ +E RV Y+
Sbjct: 185 PEKNKLEIYQSCFEQQFLQETETFYKAESADFIEKNGVCEYMRHVYNRIEQETNRVNQYM 244
Query: 186 DAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLT 245
+ K+T ++ +I+N+ + S +++L++DK DL MY+L RV + L
Sbjct: 245 PISTLEKLTKILNNVLISNYKEQFA----SKFLDILIEDKSSDLVMMYSLLSRV-NHLTP 299
Query: 246 IREVMTSHLRETG-KQLVTD-PERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNAL 303
++ + + ++ G K++ ++ E + P + LL +++ +I + ND F A+
Sbjct: 300 LKNIFSDFIKSEGLKEIESNLKEAQEKPQVLISILLKIYSRFNIMIKECYGNDTDFTTAM 359
Query: 304 NSSFEYFINLNPRS----------PEFISLFVDDKLRKGLKGVSEE-DVETILDKVMMLF 352
+ SF +N NP S P +S F D LRKG +S+E ++E L + + LF
Sbjct: 360 DKSFSILVNENPASYDPKKKESNIPVVLSKFCDQILRKGPHHISDEAELEKKLTEAVCLF 419
Query: 353 RYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKT 412
+YL +KD+F Y++ L+KRL+ + S+DAE +I KLK G+ + +KL M TDM+
Sbjct: 420 KYLPDKDIFMLNYQKMLSKRLVEDLSASEDAETLMINKLKNYQGFDYCTKLTRMITDMRL 479
Query: 413 SQDTMHEFYASHPELGD-SRTLVVQ----VLTTGSWPT---QPSVTCNLPAEMSALCEKF 464
+D F +H L + S TL Q VLT GSW Q + P+EM + F
Sbjct: 480 CKDININFQ-NH--LNEKSLTLPYQFNFYVLTNGSWTLTNKQTATPFKPPSEMLSSITYF 536
Query: 465 RSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLS 520
S+Y ++ GR L++ + AD+ + KG+ ++L + YQM +L++FN AD+++
Sbjct: 537 ESFYKKSYQGRVLTFLYDFSRADVDSRQAKGKIYKLTTTAYQMAILLMFNGADKIT 592
Score = 298 (110.0 bits), Expect = 2.8e-23, P = 2.8e-23
Identities = 80/311 (25%), Positives = 154/311 (49%)
Query: 24 EISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPSTHKTP--------- 74
EI E+ + L +WN+ + +++++L +++ + S KT
Sbjct: 71 EIMSRSESYPNDALLLFFRNQWNEWKMSSNVLKNLLSPVNKIH-SSDKKTTSSSANQNES 129
Query: 75 -VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLGPS- 132
V+ LN WR+ N ++ +L +LL+++ +RTG N ++ + ++ + LGP
Sbjct: 130 VVYSDTLNSWRETAF--NPLKNKLSVSLLQIIKNDRTGFSTNLQVLSDSLECYVQLGPEK 187
Query: 133 ----VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAK 188
+YQ FE+ FL+ + FYK ES FIE EY++ R+ +E RV Y+
Sbjct: 188 NKLEIYQSCFEQQFLQETETFYKAESADFIEKNGVCEYMRHVYNRIEQETNRVNQYMPIS 247
Query: 189 SEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIRE 248
+ K+T ++ +I+N+ + S +++L++DK DL MY+L RV + L ++
Sbjct: 248 TLEKLTKILNNVLISNYKEQFA----SKFLDILIEDKSSDLVMMYSLLSRV-NHLTPLKN 302
Query: 249 VMTSHLRETG-KQLVTD-PERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSS 306
+ + ++ G K++ ++ E + P + LL +++ +I + ND F A++ S
Sbjct: 303 IFSDFIKSEGLKEIESNLKEAQEKPQVLISILLKIYSRFNIMIKECYGNDTDFTTAMDKS 362
Query: 307 FEYFINLNPRS 317
F +N NP S
Sbjct: 363 FSILVNENPAS 373
>WB|WBGene00000841 [details] [associations]
symbol:cul-6 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0008340
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006974 GO:GO:0006511 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713 EMBL:Z77666
PIR:T23474 RefSeq:NP_502412.1 ProteinModelPortal:Q21346 SMR:Q21346
STRING:Q21346 EnsemblMetazoa:K08E7.7 GeneID:178214
KEGG:cel:CELE_K08E7.7 UCSC:K08E7.7 CTD:178214 WormBase:K08E7.7
InParanoid:Q21346 NextBio:900194 Uniprot:Q21346
Length = 729
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 154/539 (28%), Positives = 268/539 (49%)
Query: 8 EKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYI 67
E LY L + + ++ I I A G L + +W++ + ++ I Y++R ++
Sbjct: 57 EFLYKQLENYIRTYVIAIRDRISACSGDELLGKCTIEWDNFKFSTRICNCIFQYLNRNFV 116
Query: 68 PSTHK------TPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRN 121
+ +++L L++W+ + K++T ++ +LEL+ ER G IN + +
Sbjct: 117 SKKVEDKNGEIVEIYKLALDIWKAEFFDNFKVKT--IDAILELILLERCGSTINSTHISS 174
Query: 122 IIKMLMDLGPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERV 181
+++ L +L +Y+ FE FL+ + FYK E E EY+ E RL +E R
Sbjct: 175 VVECLTEL--DIYKVSFEPQFLDATKLFYKQEVLNSKETVI--EYMITVENRLFQEEYRS 230
Query: 182 THYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPS 241
YL + + + E +I++ + + +H + L+ D E L RMY+L RRV
Sbjct: 231 RRYLGPSTNDLLIDSCESILISDRL-KFLHSEFERLLEARKD---EHLTRMYSLCRRVTH 286
Query: 242 GLLTIREVMTSHL----RETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDK 297
GL +R + + ET ++L D P E++ +LL+ + Y N+I+ AF+ +
Sbjct: 287 GLEDLRVYLEKRILKEGHETLQRLAKDSGLKTTPKEYITKLLEVHEIYFNLINKAFDRNA 346
Query: 298 TFQNALNSSFEYFINLN------P------RSPEFISLFVDDKLRKGLKGVSEEDVETIL 345
F +L+ + + FI N P RS ++++ + D L+K K V + ET L
Sbjct: 347 LFMQSLDKASKDFIEANAVTMLAPEKHRSTRSADYLARYCDQLLKKNSK-VQD---ETAL 402
Query: 346 DKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEG 405
DK + + +Y+ EKDVF+ YY+ ++R+++ + SDDAE I L G ++T L
Sbjct: 403 DKALTVLKYISEKDVFQLYYQNWFSERIINNSSASDDAEEKFITNLTATEGLEYTRNLVK 462
Query: 406 MFTDMKTSQDTMHEFYASHPELGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFR 465
M D K S+D EF E +++Q TTG+WP+ + LP E+S + ++F
Sbjct: 463 MVEDAKISKDLTTEFKDIKTEKSIDFNVILQ--TTGAWPSLDQIKIILPRELSTILKEFD 520
Query: 466 SYYLGTHTGRRLSWQTNM--GSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 522
++Y +H GRRL+W + G + KA F K K+ V+ Q+C L LFN D + +
Sbjct: 521 TFYNASHNGRRLNWAYSQCRGEVNSKA-FEK--KYVFIVTASQLCTLYLFNEQDSFTIE 576
>UNIPROTKB|F1RUR7 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031462 "Cul2-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031462 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:SECINYL EMBL:CU914378
Ensembl:ENSSSCT00000012151 Uniprot:F1RUR7
Length = 510
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 121/369 (32%), Positives = 213/369 (57%)
Query: 167 LKKAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKY 226
++K RL +E R YL S K+ + ++ M+A+H+ + +H + N++ +K
Sbjct: 1 MEKVLGRLKDEEIRCRKYLHPSSYTKVIHECQQRMVADHL-QFLHAECH---NIIRQEKK 56
Query: 227 EDLGRMYNLFRRVPSGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYD 286
D+ MY L R V +GL + + + +H+ + G + ++ + P FV+ +L+ K+
Sbjct: 57 NDMANMYVLLRAVSTGLPHMIQELQNHIHDEGLRATSNLTQENMPTLFVESVLEVHGKFV 116
Query: 287 NIISSAFNNDKTFQNALNSSFEYFINLN-PRS----PEFISLFVDDKLRKGLKGVSEEDV 341
+I++ N D+ F +AL+ + +N P+S PE ++ + D+ L+K KG++E +V
Sbjct: 117 QLINTVLNGDQHFMSALDKALTSVVNYREPKSVCKAPELLAKYCDNLLKKSAKGMTENEV 176
Query: 342 ETILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTS 401
E L + +F+Y+ +KDVF+K+Y + LAKRL+ G ++S D+E ++I KLK CGY+FTS
Sbjct: 177 EDKLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTS 236
Query: 402 KLEGMFTDMKTSQDTMHEF--YASHPE----LGDSRTLVVQVLTTGSWP-TQ-PSVTCNL 453
KL M+TDM S D ++F + + + LG S + VL G+WP TQ PS T +
Sbjct: 237 KLHRMYTDMSVSADLNNKFNNFIKNQDTVIDLGIS--FQIYVLQAGAWPLTQAPSSTFAI 294
Query: 454 PAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLF 513
P E+ + F +Y +GR+L+W + + ++K + G+ + V+TYQM VL+ F
Sbjct: 295 PQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNY-LGKPYVAMVTTYQMAVLLAF 353
Query: 514 NNADRLSYQ 522
NN++ +SY+
Sbjct: 354 NNSETVSYK 362
>POMBASE|SPAC3A11.08 [details] [associations]
symbol:pcu4 "cullin 4" species:4896 "Schizosaccharomyces
pombe" [GO:0000070 "mitotic sister chromatid segregation"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006283 "transcription-coupled nucleotide-excision repair"
evidence=IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0007535 "donor selection" evidence=TAS]
[GO:0008156 "negative regulation of DNA replication" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0030702 "chromatin silencing at centromere" evidence=IMP]
[GO:0031048 "chromatin silencing by small RNA" evidence=IMP]
[GO:0031060 "regulation of histone methylation" evidence=IMP]
[GO:0031507 "heterochromatin assembly" evidence=IMP] [GO:0031618
"nuclear centromeric heterochromatin" evidence=TAS] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0032876
"negative regulation of DNA endoreduplication" evidence=IMP]
[GO:0034613 "cellular protein localization" evidence=IMP]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IGI] [GO:0043494 "CLRC
ubiquitin ligase complex" evidence=IDA] [GO:0045836 "positive
regulation of meiosis" evidence=IGI] [GO:0051570 "regulation of
histone H3-K9 methylation" evidence=IMP] [GO:0008180 "signalosome"
evidence=IDA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 PomBase:SPAC3A11.08 GO:GO:0005829 EMBL:CU329670
GO:GO:0034613 GenomeReviews:CU329670_GR Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 GO:GO:0030466 GO:GO:0000122
GO:GO:0030702 GO:GO:0000070 GO:GO:0006348 GO:GO:0031048
GO:GO:0051570 GO:GO:0004842 GO:GO:0045836 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0032876 GO:GO:0042787 GO:GO:0031507
GO:GO:0031618 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0006283
GO:GO:0007535 KO:K10609 GO:GO:0043494 EMBL:AB017029 EMBL:AB027893
PIR:T43408 RefSeq:NP_594195.1 ProteinModelPortal:O14122
IntAct:O14122 STRING:O14122 EnsemblFungi:SPAC3A11.08.1
GeneID:2543116 KEGG:spo:SPAC3A11.08 OMA:EREDNDI OrthoDB:EOG4DNJCJ
NextBio:20804143 Uniprot:O14122
Length = 734
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 145/489 (29%), Positives = 236/489 (48%)
Query: 45 WNDHNKALQMIRDILMYMDRTYIPSTHKTP-VHELGLNLWRDNIVRSNKIQTRLLNTLLE 103
WN + ++++++I YMD+T++ P + EL L+L+R+ ++ IQ LN+LL+
Sbjct: 111 WNKWLERVEIVQNIFYYMDKTFLSHHPDYPTIEELSLSLFREKLMAVKNIQIPFLNSLLQ 170
Query: 104 LVHRERTGEVINRGLMRNIIKMLMDLGPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDC 163
+ + + +++ MLM +Y F +L + + FY ES + I+
Sbjct: 171 SFENLHSSKSTDHAYLQDA--MLMLHRTEMYSSVFVPMYLVMLSRFYDTESSQKIQELPL 228
Query: 164 GEYLKKAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLD 223
EYL+ A L E V + + + I V++ +I +H+ L G+ +
Sbjct: 229 EEYLEYAMSSLEREDAYVEKFDIVRDKKSIRETVQRCLITSHLDTLT----KGISQFIEK 284
Query: 224 DKYEDLGRMYNL--FRRVPSGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDE 281
+Y L F L+ + + L + G +LV D KD VQ LL
Sbjct: 285 RDAHSCKLLYALLQFNHETEYLI---QPWSDCLVDVGFKLVNDES--KDDT-LVQELLSF 338
Query: 282 KDKYDNIISSAFNNDKTFQNALNSSFEYFIN----LNPRSP-EFISLFVDDKLRKGLKGV 336
++ +F +D+T A+ +FE FIN +P I+ ++D LR G +
Sbjct: 339 HKFLQVVVDESFLHDETLSYAMRKAFETFINGAKGSQREAPARLIAKYIDYLLRVGEQAS 398
Query: 337 SEEDVETILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECG 396
+ ++ + +++ LFRY+ KD+FE YYK +AKRLL K+ S E L+ LK CG
Sbjct: 399 GGKPLKEVFSEILDLFRYIASKDIFEAYYKLDIAKRLLLNKSASAQNELMLLDMLKKTCG 458
Query: 397 YQFTSKLEGMFTDMKTSQDTMHEFYASHPELGDSRTLVVQVLTTGSWPTQPSVTCNLPAE 456
QFT LEGMF D+ S++ F S R L V VL+ WP+ P LP +
Sbjct: 459 SQFTHSLEGMFRDVNISKEFTSSFRHSKAAHNLHRDLYVNVLSQAYWPSYPESHIRLPDD 518
Query: 457 MSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNA 516
M + F +YL G+++SW ++G +KA F G K EL++S +Q CVL+ FNN
Sbjct: 519 MQQDLDCFEKFYLSKQVGKKISWYASLGHCIVKARFPLGNK-ELSISLFQACVLLQFNNC 577
Query: 517 ---DRLSYQ 522
+ +SYQ
Sbjct: 578 LGGEGISYQ 586
>UNIPROTKB|I3L5Y8 [details] [associations]
symbol:I3L5Y8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 Pfam:PF00888
GO:GO:0006511 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:DECMLRE Ensembl:ENSSSCT00000029748
Uniprot:I3L5Y8
Length = 225
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 103/207 (49%), Positives = 143/207 (69%)
Query: 24 EISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPSTHKTPVHELGLNLW 83
++ + + + +FL+ LN+ WNDH A+ MIRDILMYMDR Y+ + V+ LGL ++
Sbjct: 16 KVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYNLGLIIF 75
Query: 84 RDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLG---PSVYQEDFEK 140
RD +VR I+ L TLL+++ RER GEV++RG +RN +MLM LG SVY+EDFE
Sbjct: 76 RDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEA 135
Query: 141 PFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAKITNVVEKE 200
PFLE+SAEF+++ESQKF+ Y+KK E R+NEE+ERV H LD +E I VVE+E
Sbjct: 136 PFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERE 195
Query: 201 MIANHMPRLVHMDNSGLVNMLLDDKYE 227
+I+ HM +V M+NSGLV+ML + K E
Sbjct: 196 LISKHMKTIVEMENSGLVHMLKNGKTE 222
>UNIPROTKB|D4A0H4 [details] [associations]
symbol:Cul2 "Cullin 2 (Predicted), isoform CRA_a"
species:10116 "Rattus norvegicus" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0031462 "Cul2-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 RGD:1310644 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
KO:K03870 CTD:8453 EMBL:CH474030 IPI:IPI00947898
RefSeq:NP_001101887.1 UniGene:Rn.2970 Ensembl:ENSRNOT00000066805
GeneID:361258 KEGG:rno:361258 NextBio:675723 Uniprot:D4A0H4
Length = 725
Score = 505 (182.8 bits), Expect = 2.7e-48, P = 2.7e-48
Identities = 158/557 (28%), Positives = 279/557 (50%)
Query: 7 GEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTY 66
GE+LY+ + H++ + K + ++ L +R W +++K + + Y++ Y
Sbjct: 54 GERLYAETKIFLENHVRHLYKRVLESEE-QVLVMYHRYWEEYSKGADYMDCLYRYLNTQY 112
Query: 67 IPSTHKT---------------PVHELG---LNLWRDNIVRSNKIQTRLLNTLLELVHRE 108
I T P+ E+G L++WR +V +Q L+ LL + +
Sbjct: 113 IKKNKLTEADLQYGYGGVDMNEPLMEIGELALDMWRKLMVEP--LQNILIRMLLREIKND 170
Query: 109 RTGEVINRGLMRNIIKMLMDLGPSVYQEDFEKPFLEVSAEFYK-VESQKFIECCDCGEYL 167
R GE N+ ++ +I V+ E ++K F +FY+ + F+ + GEY
Sbjct: 171 RGGEDPNQKVIHGVINSF------VHVEQYKKKF---PLKFYQGIFVSPFLT--ETGEYY 219
Query: 168 KKAERRLNEE------MERVTHYLDAKSEAKITNVVEK----EMIANHMPRLV--HMD-- 213
K+ L +E ME+V L + E + + ++I R+V H+
Sbjct: 220 KQEASNLLQESNCSQYMEKVLGRLKDE-EIRCRKYLHPSSYTKVIHECQQRMVADHLQFL 278
Query: 214 NSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREVMTSHLRETGKQLVTDPERLKDPVE 273
+S +++ ++ D+ MY L R V SGL + E + H+ + G + ++ + P
Sbjct: 279 HSECHSIIRHERKNDMANMYVLLRAVSSGLPHMIEELQRHIHDEGLRATSNLTQEHMPTL 338
Query: 274 FVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGL 333
FV+ +L+ K+ +I++ N D+ F +AL+ +Y NL L+K
Sbjct: 339 FVESVLEVHGKFVQLINTVLNGDQHFMSALDKLAKYCDNL---------------LKKSA 383
Query: 334 KGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKT 393
KG++E +VE L + +F+Y+ +KDVF+K+Y + LAKRL+ G ++S D+E ++I KLK
Sbjct: 384 KGMTENEVEDKLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLKQ 443
Query: 394 ECGYQFTSKLEGMFTDMKTSQDTMHEF--YASHPE----LGDSRTLVVQVLTTGSWP-TQ 446
CGY+FTSKL M+TDM S D ++F + + + LG S + VL G+WP TQ
Sbjct: 444 ACGYEFTSKLHRMYTDMSVSADLNNKFNNFIRNQDTVIDLGIS--FQIYVLQAGAWPLTQ 501
Query: 447 -PSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTY 505
PS T +P E+ + F +Y +GR+L+W + + ++K + G+ + V+TY
Sbjct: 502 APSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNY-LGKPYVAMVTTY 560
Query: 506 QMCVLMLFNNADRLSYQ 522
QM VL+ FNN++ +SY+
Sbjct: 561 QMAVLLAFNNSETVSYK 577
>WB|WBGene00000837 [details] [associations]
symbol:cul-2 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0051759 "sister chromosome movement
towards spindle pole involved in meiotic sister chromatid
segregation" evidence=IMP] [GO:0007138 "meiotic anaphase II"
evidence=IMP] [GO:0042078 "germ-line stem cell division"
evidence=IMP] [GO:0008054 "cyclin catabolic process" evidence=IMP]
[GO:0051232 "meiotic spindle elongation" evidence=IMP] [GO:0008595
"anterior/posterior axis specification, embryo" evidence=IMP]
[GO:0008105 "asymmetric protein localization" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0005634 GO:GO:0009792 GO:GO:0005737 GO:GO:0007067
GO:GO:0008595 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0008105 GO:GO:0030261 eggNOG:COG5647 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GO:GO:0042078 GO:GO:0007138 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176713 EMBL:U58084 EMBL:Z92822 PIR:C88618 PIR:T27884
RefSeq:NP_001023007.1 RefSeq:NP_001023008.1 RefSeq:NP_001023009.1
RefSeq:NP_499825.3 UniGene:Cel.21341 ProteinModelPortal:Q17390
SMR:Q17390 IntAct:Q17390 MINT:MINT-4507382 STRING:Q17390
PaxDb:Q17390 PRIDE:Q17390 EnsemblMetazoa:ZK520.4a GeneID:176806
KEGG:cel:CELE_ZK520.4 UCSC:ZK520.4a CTD:35420 WormBase:ZK520.4a
WormBase:ZK520.4b WormBase:ZK520.4c WormBase:ZK520.4d
InParanoid:Q9NA22 KO:K03870 OMA:VMLDYVE NextBio:894074
ArrayExpress:Q17390 GO:GO:0051232 GO:GO:0051759 Uniprot:Q17390
Length = 850
Score = 457 (165.9 bits), Expect = 1.9e-45, Sum P(2) = 1.9e-45
Identities = 102/332 (30%), Positives = 185/332 (55%)
Query: 134 YQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAKI 193
YQE FEKP L + ++Y +QK + C EY+++ L +E R YL S K+
Sbjct: 295 YQESFEKPLLTDTEQYYSALAQKMLTDLSCSEYMEQVIVLLEQEEMRAKKYLHESSVEKV 354
Query: 194 TNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREVMTSH 253
+ +K MI H +L ++ +++ +++ +DL MY L + + +GL + + +
Sbjct: 355 ITLCQKVMIKAHKDKL----HAVCHDLITNEENKDLRNMYRLLKPIQAGLSVMVKEFEEY 410
Query: 254 LRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEYFINL 313
+++ G + V+ P +FV+ +L +K++++ ++ F +D F + L+ + + +N
Sbjct: 411 VKKKGLEAVSRLTGENVPQQFVENVLRVYNKFNDMKTAVFMDDGEFSSGLDKALQGVVNS 470
Query: 314 N------PRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQ 367
P++ E ++ + D L+K KG+SE D+E LD +++FRY+++KD+F+K+Y +
Sbjct: 471 KEPGQSVPKASERLARYTDGLLKKSTKGLSETDLEAKLDSAIVIFRYIEDKDIFQKFYSK 530
Query: 368 HLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEFYASHPEL 427
LA RL++ ++S DAE +I KLK CGY+FTSKL MFTD+ SQ+ + F ++
Sbjct: 531 MLANRLIASTSISMDAEELMINKLKQACGYEFTSKLSRMFTDIGLSQELSNNFDKHIADI 590
Query: 428 G----DSRTLVVQ--VLTTGSWPTQ-PSVTCN 452
D + + Q +L GSWP P ++ N
Sbjct: 591 KTVQPDVKFVPTQTMILQAGSWPLNAPQLSTN 622
Score = 133 (51.9 bits), Expect = 9.3e-14, Sum P(3) = 9.3e-14
Identities = 56/253 (22%), Positives = 121/253 (47%)
Query: 78 LGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGE---VINR--GLMRNIIKMLMDLGPS 132
L L +W++++V++ I +L+ LL + +R G + N G++ + +KM
Sbjct: 220 LALEIWKEDLVKT--ILPQLVKLLLIAIDNDRKGNFPHIANEVSGVINSFVKMEETDFDV 277
Query: 133 VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKK-AERRL-----NEEMERVTHYLD 186
V E E + FY+ +K + D +Y A++ L +E ME+V L+
Sbjct: 278 VPAEGARYKARESTTAFYQESFEKPL-LTDTEQYYSALAQKMLTDLSCSEYMEQVIVLLE 336
Query: 187 AKS-EAKI---TNVVEKEM-IANHMPRLVHMDNSGLV--NMLLDDKYEDLGRMYNLFRRV 239
+ AK + VEK + + + H D V +++ +++ +DL MY L + +
Sbjct: 337 QEEMRAKKYLHESSVEKVITLCQKVMIKAHKDKLHAVCHDLITNEENKDLRNMYRLLKPI 396
Query: 240 PSGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTF 299
+GL + + ++++ G + V+ P +FV+ +L +K++++ ++ F +D F
Sbjct: 397 QAGLSVMVKEFEEYVKKKGLEAVSRLTGENVPQQFVENVLRVYNKFNDMKTAVFMDDGEF 456
Query: 300 QNALNSSFEYFIN 312
+ L+ + + +N
Sbjct: 457 SSGLDKALQGVVN 469
Score = 122 (48.0 bits), Expect = 9.3e-14, Sum P(3) = 9.3e-14
Identities = 34/140 (24%), Positives = 65/140 (46%)
Query: 386 SLIVKLKTECGY--QFTSKLEGMFTDMKTSQDTMHEFYASHPEL--GDSRTLVVQVLTTG 441
S + ++ T+ G + ++ + D+KT Q + +F + + S L L+T
Sbjct: 564 SKLSRMFTDIGLSQELSNNFDKHIADIKTVQPDV-KFVPTQTMILQAGSWPLNAPQLSTN 622
Query: 442 S--WPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHE 499
S Q +LP + + ++F +Y G H GR+L+W NM D++ T+ +++
Sbjct: 623 SNNQTAQDVANFHLPRILQPVIQEFEKFYTGKHNGRKLTWLFNMSQGDVRLTY-LDKQYV 681
Query: 500 LNVSTYQMCVLMLFNNADRL 519
+ YQM L+ F D +
Sbjct: 682 AQMYVYQMAALLCFERRDAI 701
Score = 53 (23.7 bits), Expect = 1.9e-45, Sum P(2) = 1.9e-45
Identities = 10/60 (16%), Positives = 30/60 (50%)
Query: 8 EKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYI 67
E+LY+ + + + H+++ + I L+E ++ W ++ I + Y+++ ++
Sbjct: 132 ERLYNEVKACIQEHVRQKRQDIVDVDPDLLLQEYHKMWRVFHEGAIFIHRLFGYLNKQFV 191
>UNIPROTKB|Q17390 [details] [associations]
symbol:cul-2 "Cullin-2" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0005634 GO:GO:0009792 GO:GO:0005737 GO:GO:0007067
GO:GO:0008595 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0008105 GO:GO:0030261 eggNOG:COG5647 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GO:GO:0042078 GO:GO:0007138 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176713 EMBL:U58084 EMBL:Z92822 PIR:C88618 PIR:T27884
RefSeq:NP_001023007.1 RefSeq:NP_001023008.1 RefSeq:NP_001023009.1
RefSeq:NP_499825.3 UniGene:Cel.21341 ProteinModelPortal:Q17390
SMR:Q17390 IntAct:Q17390 MINT:MINT-4507382 STRING:Q17390
PaxDb:Q17390 PRIDE:Q17390 EnsemblMetazoa:ZK520.4a GeneID:176806
KEGG:cel:CELE_ZK520.4 UCSC:ZK520.4a CTD:35420 WormBase:ZK520.4a
WormBase:ZK520.4b WormBase:ZK520.4c WormBase:ZK520.4d
InParanoid:Q9NA22 KO:K03870 OMA:VMLDYVE NextBio:894074
ArrayExpress:Q17390 GO:GO:0051232 GO:GO:0051759 Uniprot:Q17390
Length = 850
Score = 457 (165.9 bits), Expect = 1.9e-45, Sum P(2) = 1.9e-45
Identities = 102/332 (30%), Positives = 185/332 (55%)
Query: 134 YQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAKI 193
YQE FEKP L + ++Y +QK + C EY+++ L +E R YL S K+
Sbjct: 295 YQESFEKPLLTDTEQYYSALAQKMLTDLSCSEYMEQVIVLLEQEEMRAKKYLHESSVEKV 354
Query: 194 TNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREVMTSH 253
+ +K MI H +L ++ +++ +++ +DL MY L + + +GL + + +
Sbjct: 355 ITLCQKVMIKAHKDKL----HAVCHDLITNEENKDLRNMYRLLKPIQAGLSVMVKEFEEY 410
Query: 254 LRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEYFINL 313
+++ G + V+ P +FV+ +L +K++++ ++ F +D F + L+ + + +N
Sbjct: 411 VKKKGLEAVSRLTGENVPQQFVENVLRVYNKFNDMKTAVFMDDGEFSSGLDKALQGVVNS 470
Query: 314 N------PRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQ 367
P++ E ++ + D L+K KG+SE D+E LD +++FRY+++KD+F+K+Y +
Sbjct: 471 KEPGQSVPKASERLARYTDGLLKKSTKGLSETDLEAKLDSAIVIFRYIEDKDIFQKFYSK 530
Query: 368 HLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEFYASHPEL 427
LA RL++ ++S DAE +I KLK CGY+FTSKL MFTD+ SQ+ + F ++
Sbjct: 531 MLANRLIASTSISMDAEELMINKLKQACGYEFTSKLSRMFTDIGLSQELSNNFDKHIADI 590
Query: 428 G----DSRTLVVQ--VLTTGSWPTQ-PSVTCN 452
D + + Q +L GSWP P ++ N
Sbjct: 591 KTVQPDVKFVPTQTMILQAGSWPLNAPQLSTN 622
Score = 133 (51.9 bits), Expect = 9.3e-14, Sum P(3) = 9.3e-14
Identities = 56/253 (22%), Positives = 121/253 (47%)
Query: 78 LGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGE---VINR--GLMRNIIKMLMDLGPS 132
L L +W++++V++ I +L+ LL + +R G + N G++ + +KM
Sbjct: 220 LALEIWKEDLVKT--ILPQLVKLLLIAIDNDRKGNFPHIANEVSGVINSFVKMEETDFDV 277
Query: 133 VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKK-AERRL-----NEEMERVTHYLD 186
V E E + FY+ +K + D +Y A++ L +E ME+V L+
Sbjct: 278 VPAEGARYKARESTTAFYQESFEKPL-LTDTEQYYSALAQKMLTDLSCSEYMEQVIVLLE 336
Query: 187 AKS-EAKI---TNVVEKEM-IANHMPRLVHMDNSGLV--NMLLDDKYEDLGRMYNLFRRV 239
+ AK + VEK + + + H D V +++ +++ +DL MY L + +
Sbjct: 337 QEEMRAKKYLHESSVEKVITLCQKVMIKAHKDKLHAVCHDLITNEENKDLRNMYRLLKPI 396
Query: 240 PSGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTF 299
+GL + + ++++ G + V+ P +FV+ +L +K++++ ++ F +D F
Sbjct: 397 QAGLSVMVKEFEEYVKKKGLEAVSRLTGENVPQQFVENVLRVYNKFNDMKTAVFMDDGEF 456
Query: 300 QNALNSSFEYFIN 312
+ L+ + + +N
Sbjct: 457 SSGLDKALQGVVN 469
Score = 122 (48.0 bits), Expect = 9.3e-14, Sum P(3) = 9.3e-14
Identities = 34/140 (24%), Positives = 65/140 (46%)
Query: 386 SLIVKLKTECGY--QFTSKLEGMFTDMKTSQDTMHEFYASHPEL--GDSRTLVVQVLTTG 441
S + ++ T+ G + ++ + D+KT Q + +F + + S L L+T
Sbjct: 564 SKLSRMFTDIGLSQELSNNFDKHIADIKTVQPDV-KFVPTQTMILQAGSWPLNAPQLSTN 622
Query: 442 S--WPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHE 499
S Q +LP + + ++F +Y G H GR+L+W NM D++ T+ +++
Sbjct: 623 SNNQTAQDVANFHLPRILQPVIQEFEKFYTGKHNGRKLTWLFNMSQGDVRLTY-LDKQYV 681
Query: 500 LNVSTYQMCVLMLFNNADRL 519
+ YQM L+ F D +
Sbjct: 682 AQMYVYQMAALLCFERRDAI 701
Score = 53 (23.7 bits), Expect = 1.9e-45, Sum P(2) = 1.9e-45
Identities = 10/60 (16%), Positives = 30/60 (50%)
Query: 8 EKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYI 67
E+LY+ + + + H+++ + I L+E ++ W ++ I + Y+++ ++
Sbjct: 132 ERLYNEVKACIQEHVRQKRQDIVDVDPDLLLQEYHKMWRVFHEGAIFIHRLFGYLNKQFV 191
>CGD|CAL0000107 [details] [associations]
symbol:CDC53 species:5476 "Candida albicans" [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA;ISA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISA;IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISA;IMP] [GO:0006521 "regulation of cellular
amino acid metabolic process" evidence=IMP] [GO:0010570 "regulation
of filamentous growth" evidence=IMP] [GO:0005829 "cytosol"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0000086 "G2/M transition of
mitotic cell cycle" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070783 "growth of unicellular organism
as a thread of attached cells" evidence=IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0003688 "DNA replication
origin binding" evidence=IEA] [GO:0030674 "protein binding,
bridging" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 CGD:CAL0000107 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 GO:GO:0019005 EMBL:AACQ01000014
EMBL:AACQ01000013 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0010570
GO:GO:0006521 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0031146
GO:GO:0070783 KO:K03347 RefSeq:XP_721632.1 RefSeq:XP_721751.1
ProteinModelPortal:Q5AJB7 STRING:Q5AJB7 GeneID:3636603
GeneID:3636750 KEGG:cal:CaO19.1674 KEGG:cal:CaO19.9243
Uniprot:Q5AJB7
Length = 752
Score = 460 (167.0 bits), Expect = 5.1e-43, P = 5.1e-43
Identities = 121/408 (29%), Positives = 214/408 (52%)
Query: 133 VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAK 192
+Y FE PFLE + E+Y ES F+ + +Y+KK E R+ EE+ R +YL+ +++
Sbjct: 212 IYVNSFEIPFLEATMEYYAKESAAFLASHNVIDYMKKCETRIGEEVSRSNNYLEERTKKP 271
Query: 193 ITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREVMTS 252
+ V+ +I H M + LV +L ++ + + RMY L RV L + +
Sbjct: 272 LLEVLNAALIEKHANE---MYDQFLV-LLEQNQIDHIQRMYKLLARVQKTLDPLANTLEL 327
Query: 253 HLRETG----KQLVTDPE------RLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNA 302
++++ +++ T E ++ +P +V L+ +++++I+ AF+ D F +
Sbjct: 328 YIKKEAAAALEEIQTQAENSEAKKKIVEPKVYVHTLISIYNRFNDIVVRAFSKDTKFIKS 387
Query: 303 LNSSFEYFINLNP----------RSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLF 352
L+++ +F+N NP R+PE ++ + D L+ K D E D +M++F
Sbjct: 388 LDNACRHFVNNNPIATPKPRSPCRTPELLARYADGFLKSNSK-----DNEMNADNLMIVF 442
Query: 353 RYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKT 412
+++ E+D FE++Y++ LAKRL++G + S++ E S+I +L+ E ++TSK+ MFTD+K
Sbjct: 443 KFIAERDSFEEHYRRLLAKRLVNGTSKSEEMEESVIHRLQEENSIEYTSKMTKMFTDIKA 502
Query: 413 SQDTMHEFYASHPELGDSRTLVVQVLTTGSWPTQPSVTCN---LPAEMSALCEKFRSYYL 469
S D +F L D +V L +WP S N L E+ + F++ YL
Sbjct: 503 SDDLKIKFKDGMNVLFDFSPMV---LARSTWPFHSSQDYNDLKLAPELKVTIDSFKAMYL 559
Query: 470 GTHTGRRLSWQTNMGSADIKA--TFGKGQK-HELNVSTYQMCVLMLFN 514
G+++ W N G A++KA T GKG K VS Q+ VL+ +N
Sbjct: 560 QQGKGKQIEWLWNHGRAELKAHLTKGKGGKPFNFIVSQIQLMVLLAYN 607
Score = 232 (86.7 bits), Expect = 5.8e-16, P = 5.8e-16
Identities = 74/320 (23%), Positives = 153/320 (47%)
Query: 21 HLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIP---STHKTPVHE 77
+L E K+++ SFLE RKW + ++ YM+R ++ S + V++
Sbjct: 86 YLTEFIKNLKRLPNESFLEFYVRKWTRFTIGAVYMNNVFDYMNRYWVQKERSDGRKDVYD 145
Query: 78 LG-LNL--WRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLG---- 130
+ L+ W+D + + N L+ +L + ++R +++ L+ + IK L+ L
Sbjct: 146 VNTLSFIKWKDEMFKPNS--KLLIEQILTCIQQQRDNMIVDTNLISSAIKSLVFLSIDIQ 203
Query: 131 ----PS--VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHY 184
P+ +Y FE PFLE + E+Y ES F+ + +Y+KK E R+ EE+ R +Y
Sbjct: 204 DLKKPNLIIYVNSFEIPFLEATMEYYAKESAAFLASHNVIDYMKKCETRIGEEVSRSNNY 263
Query: 185 LDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLL 244
L+ +++ + V+ +I H M + LV +L ++ + + RMY L RV L
Sbjct: 264 LEERTKKPLLEVLNAALIEKHANE---MYDQFLV-LLEQNQIDHIQRMYKLLARVQKTLD 319
Query: 245 TIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFN--NDKTFQNA 302
+ + ++++ + + + + E +++++ K Y + + S +N ND + A
Sbjct: 320 PLANTLELYIKKEAAAALEEIQTQAENSEAKKKIVEPK-VYVHTLISIYNRFNDIVVR-A 377
Query: 303 LNSSFEYFINLNPRSPEFIS 322
+ ++ +L+ F++
Sbjct: 378 FSKDTKFIKSLDNACRHFVN 397
>UNIPROTKB|Q5AJB7 [details] [associations]
symbol:CDC53 "Putative uncharacterized protein CDC53"
species:237561 "Candida albicans SC5314" [GO:0006521 "regulation of
cellular amino acid metabolic process" evidence=IMP] [GO:0010570
"regulation of filamentous growth" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=ISA;IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=ISA] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISA;IMP]
[GO:0070783 "growth of unicellular organism as a thread of attached
cells" evidence=IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISA;IMP] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 CGD:CAL0000107 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 GO:GO:0019005 EMBL:AACQ01000014
EMBL:AACQ01000013 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0010570
GO:GO:0006521 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0031146
GO:GO:0070783 KO:K03347 RefSeq:XP_721632.1 RefSeq:XP_721751.1
ProteinModelPortal:Q5AJB7 STRING:Q5AJB7 GeneID:3636603
GeneID:3636750 KEGG:cal:CaO19.1674 KEGG:cal:CaO19.9243
Uniprot:Q5AJB7
Length = 752
Score = 460 (167.0 bits), Expect = 5.1e-43, P = 5.1e-43
Identities = 121/408 (29%), Positives = 214/408 (52%)
Query: 133 VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAK 192
+Y FE PFLE + E+Y ES F+ + +Y+KK E R+ EE+ R +YL+ +++
Sbjct: 212 IYVNSFEIPFLEATMEYYAKESAAFLASHNVIDYMKKCETRIGEEVSRSNNYLEERTKKP 271
Query: 193 ITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREVMTS 252
+ V+ +I H M + LV +L ++ + + RMY L RV L + +
Sbjct: 272 LLEVLNAALIEKHANE---MYDQFLV-LLEQNQIDHIQRMYKLLARVQKTLDPLANTLEL 327
Query: 253 HLRETG----KQLVTDPE------RLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNA 302
++++ +++ T E ++ +P +V L+ +++++I+ AF+ D F +
Sbjct: 328 YIKKEAAAALEEIQTQAENSEAKKKIVEPKVYVHTLISIYNRFNDIVVRAFSKDTKFIKS 387
Query: 303 LNSSFEYFINLNP----------RSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLF 352
L+++ +F+N NP R+PE ++ + D L+ K D E D +M++F
Sbjct: 388 LDNACRHFVNNNPIATPKPRSPCRTPELLARYADGFLKSNSK-----DNEMNADNLMIVF 442
Query: 353 RYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKT 412
+++ E+D FE++Y++ LAKRL++G + S++ E S+I +L+ E ++TSK+ MFTD+K
Sbjct: 443 KFIAERDSFEEHYRRLLAKRLVNGTSKSEEMEESVIHRLQEENSIEYTSKMTKMFTDIKA 502
Query: 413 SQDTMHEFYASHPELGDSRTLVVQVLTTGSWPTQPSVTCN---LPAEMSALCEKFRSYYL 469
S D +F L D +V L +WP S N L E+ + F++ YL
Sbjct: 503 SDDLKIKFKDGMNVLFDFSPMV---LARSTWPFHSSQDYNDLKLAPELKVTIDSFKAMYL 559
Query: 470 GTHTGRRLSWQTNMGSADIKA--TFGKGQK-HELNVSTYQMCVLMLFN 514
G+++ W N G A++KA T GKG K VS Q+ VL+ +N
Sbjct: 560 QQGKGKQIEWLWNHGRAELKAHLTKGKGGKPFNFIVSQIQLMVLLAYN 607
Score = 232 (86.7 bits), Expect = 5.8e-16, P = 5.8e-16
Identities = 74/320 (23%), Positives = 153/320 (47%)
Query: 21 HLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIP---STHKTPVHE 77
+L E K+++ SFLE RKW + ++ YM+R ++ S + V++
Sbjct: 86 YLTEFIKNLKRLPNESFLEFYVRKWTRFTIGAVYMNNVFDYMNRYWVQKERSDGRKDVYD 145
Query: 78 LG-LNL--WRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLG---- 130
+ L+ W+D + + N L+ +L + ++R +++ L+ + IK L+ L
Sbjct: 146 VNTLSFIKWKDEMFKPNS--KLLIEQILTCIQQQRDNMIVDTNLISSAIKSLVFLSIDIQ 203
Query: 131 ----PS--VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHY 184
P+ +Y FE PFLE + E+Y ES F+ + +Y+KK E R+ EE+ R +Y
Sbjct: 204 DLKKPNLIIYVNSFEIPFLEATMEYYAKESAAFLASHNVIDYMKKCETRIGEEVSRSNNY 263
Query: 185 LDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLL 244
L+ +++ + V+ +I H M + LV +L ++ + + RMY L RV L
Sbjct: 264 LEERTKKPLLEVLNAALIEKHANE---MYDQFLV-LLEQNQIDHIQRMYKLLARVQKTLD 319
Query: 245 TIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFN--NDKTFQNA 302
+ + ++++ + + + + E +++++ K Y + + S +N ND + A
Sbjct: 320 PLANTLELYIKKEAAAALEEIQTQAENSEAKKKIVEPK-VYVHTLISIYNRFNDIVVR-A 377
Query: 303 LNSSFEYFINLNPRSPEFIS 322
+ ++ +L+ F++
Sbjct: 378 FSKDTKFIKSLDNACRHFVN 397
>UNIPROTKB|I3L5M8 [details] [associations]
symbol:LOC100739075 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 GeneTree:ENSGT00550000074299 EMBL:CU468368
Ensembl:ENSSSCT00000028601 OMA:PRQLRNT Uniprot:I3L5M8
Length = 328
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 88/181 (48%), Positives = 124/181 (68%)
Query: 344 ILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKL 403
+LDK+M++FR++ KDVFE +YK+ LAKRLL GK+ S DAE+S++ KLK ECG FTSKL
Sbjct: 1 MLDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKL 60
Query: 404 EGMFTDMKTSQDTMHEF--YASHPELGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALC 461
EGMF DM+ S+D M +F Y + + + L V +LT G WPT + +LP EM L
Sbjct: 61 EGMFKDMELSKDIMIQFKQYMQNQNVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQ 120
Query: 462 EKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSY 521
E F+++YLG H+GR+L WQ+ +G +KA F +G+K EL VS +Q VL++FN + S
Sbjct: 121 EIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKK-ELQVSLFQTLVLLMFNEGEEFSL 179
Query: 522 Q 522
+
Sbjct: 180 E 180
>TAIR|locus:2024755 [details] [associations]
symbol:CUL2 "cullin 2" species:3702 "Arabidopsis
thaliana" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] InterPro:IPR001373
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009941
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 GO:GO:0019005
eggNOG:COG5647 SUPFAM:SSF75632 EMBL:AC009525 InterPro:IPR016159
SUPFAM:SSF74788 KO:K03347 HOGENOM:HOG000176712
ProtClustDB:CLSN2689296 EMBL:AK117909 EMBL:BT006231 IPI:IPI00541917
PIR:D86160 RefSeq:NP_171797.2 UniGene:At.42569 HSSP:Q9JLV5
ProteinModelPortal:Q9SRZ0 SMR:Q9SRZ0 STRING:Q9SRZ0 PaxDb:Q9SRZ0
PRIDE:Q9SRZ0 EnsemblPlants:AT1G02980.1 GeneID:839415
KEGG:ath:AT1G02980 TAIR:At1g02980 InParanoid:Q9SRZ0 OMA:NDYHERS
PhylomeDB:Q9SRZ0 Genevestigator:Q9SRZ0 Uniprot:Q9SRZ0
Length = 742
Score = 445 (161.7 bits), Expect = 2.1e-41, P = 2.1e-41
Identities = 136/448 (30%), Positives = 221/448 (49%)
Query: 92 KIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLGPSVYQEDFEKPFLEVSAEFYK 151
+I LL ++++ GE++ + L++ S Y + + E S Y
Sbjct: 165 QIDRALLKNVIDVYCGNGMGELVK--YEEDFESFLLEDSASYYSRNASRWNQENSCPDYM 222
Query: 152 VESQKFIECCDCGEYLKKAERRLNEEMERVTH-YLDAKSEAKITNVVEKEMIAN-H---- 205
++++ E L+ + R+ + T L AK + ++ VV K++I N H
Sbjct: 223 IKAE---------ESLRLEKERVTNYLHSTTEPKLVAKVQNELLVVVAKQLIENEHSGCR 273
Query: 206 -MPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRR--VPSGLLTIREVMTSHLRETGKQLV 262
+ R MD+ + L + L + +LF++ G I++ + T K
Sbjct: 274 ALLRDDKMDDLARMYRLYHPIPQGLDPVADLFKQHITVEGSALIKQATEA---ATDKAAS 330
Query: 263 TDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEYFIN---LNPRSPE 319
T +++D V +++L+D DK+ + F F AL +FE F N S E
Sbjct: 331 TSGLKVQDQV-LIRQLIDLHDKFMVYVDECFQKHSLFHKALKEAFEVFCNKTVAGVSSAE 389
Query: 320 FISLFVDDKLRKG--LKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGK 377
++ + D+ L+ G ++ + ED+E L+KV+ L Y+ +KD+F +++++ A+RLL +
Sbjct: 390 ILATYCDNILKTGGGIEKLENEDLELTLEKVVKLLVYISDKDLFAEFFRKKQARRLLFDR 449
Query: 378 TVSDDAERSLIVKLKTECGYQFTSKLEGMFTDM---KTSQDTMHEFYASHPELGDSRTLV 434
+D ERSL+ K K G QFTSK+EGM TDM K Q EF + +
Sbjct: 450 NGNDYHERSLLTKFKELLGAQFTSKMEGMLTDMTLAKEHQTNFVEFLSVNKTKKLGMDFT 509
Query: 435 VQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTG-RRLSWQTNMGSADIKATFG 493
V VLTTG WP+ + NLP EM E F++YY GT T RRLSW ++G+ + F
Sbjct: 510 VTVLTTGFWPSYKTTDLNLPIEMVNCVEAFKAYY-GTKTNSRRLSWIYSLGTCQLAGKFD 568
Query: 494 KGQKHELNVSTYQMCVLMLFNNADRLSY 521
K + E+ V+TYQ VL+LFNN +RLSY
Sbjct: 569 K-KTIEIVVTTYQAAVLLLFNNTERLSY 595
Score = 382 (139.5 bits), Expect = 4.4e-33, P = 4.4e-33
Identities = 101/360 (28%), Positives = 183/360 (50%)
Query: 6 FGEKLYSGLVSTMTLHLKE-ISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDR 64
+ +++Y + K+ + +I G L EL ++W + ++ + Y+DR
Sbjct: 59 YSQQIYDRYGGVYVDYNKQTVLPAIREKHGEYMLRELVKRWANQKILVRWLSHFFEYLDR 118
Query: 65 TYIP-STHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNII 123
Y +H T + +G +RD + + ++Q++ + +L L+H+ER GE I+R L++N+I
Sbjct: 119 FYTRRGSHPT-LSAVGFISFRDLVYQ--ELQSKAKDAVLALIHKEREGEQIDRALLKNVI 175
Query: 124 KMLMD--LGPSV-YQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMER 180
+ +G V Y+EDFE LE SA +Y + ++ + C +Y+ KAE L E ER
Sbjct: 176 DVYCGNGMGELVKYEEDFESFLLEDSASYYSRNASRWNQENSCPDYMIKAEESLRLEKER 235
Query: 181 VTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVP 240
VT+YL + +E K+ V+ E++ +L+ ++SG +L DDK +DL RMY L+ +P
Sbjct: 236 VTNYLHSTTEPKLVAKVQNELLVVVAKQLIENEHSGCRALLRDDKMDDLARMYRLYHPIP 295
Query: 241 SGLLTIREVMTSHLRETGKQLV-------TDPE------RLKDPVEFVQRLLDEKDKYDN 287
GL + ++ H+ G L+ TD +++D V +++L+D DK+
Sbjct: 296 QGLDPVADLFKQHITVEGSALIKQATEAATDKAASTSGLKVQDQV-LIRQLIDLHDKFMV 354
Query: 288 IISSAFNNDKTFQNALNSSFEYFIN---LNPRSPEFISLFVDDKLRKGLKGVSEEDVETI 344
+ F F AL +FE F N S E ++ + D+ L+ G G+ + + E +
Sbjct: 355 YVDECFQKHSLFHKALKEAFEVFCNKTVAGVSSAEILATYCDNILKTG-GGIEKLENEDL 413
>WB|WBGene00000840 [details] [associations]
symbol:cul-5 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0051729
"germline cell cycle switching, mitotic to meiotic cell cycle"
evidence=IMP] [GO:0006468 "protein phosphorylation" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0008340 GO:GO:0006468 GO:GO:0000003 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0051729 GO:GO:0006974 GO:GO:0016567
GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
EMBL:Z70783 PIR:T28043 RefSeq:NP_505616.2 ProteinModelPortal:Q23639
SMR:Q23639 DIP:DIP-25847N IntAct:Q23639 MINT:MINT-1126406
STRING:Q23639 PaxDb:Q23639 EnsemblMetazoa:ZK856.1 GeneID:179413
KEGG:cel:CELE_ZK856.1 UCSC:ZK856.1 CTD:43434 WormBase:ZK856.1
HOGENOM:HOG000007610 InParanoid:Q23639 KO:K10612 OMA:EVTTFQM
NextBio:905286 Uniprot:Q23639
Length = 765
Score = 255 (94.8 bits), Expect = 1.6e-39, Sum P(2) = 1.6e-39
Identities = 63/258 (24%), Positives = 132/258 (51%)
Query: 277 RLLDEKDKYDNIISSAFNNDKTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGL--K 334
RLL +DK + N+ F+ + + +++ + E ++ + D LRK K
Sbjct: 347 RLLTARDK---AFRAVVNDSSIFKTEMMNKKGRTLSVESKCAELLANYCDLLLRKTQLSK 403
Query: 335 GVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTE 394
++ E+++ L++V+++ +Y++ KDVF ++++ HL++RL+ + + E ++ KL+ E
Sbjct: 404 KLTSEEIDEKLNQVLLVLKYVENKDVFMRFHRAHLSRRLILEMSADQEKEEMMVTKLR-E 462
Query: 395 CGY--QFTSKLEGMFTDMKTSQDTMHEFYASHPELGDSRTLV----VQVLTTGSWPTQPS 448
CG +KL M D++ ++D F + +++++ ++VL G+W S
Sbjct: 463 CGMPSDAVNKLSRMLQDIELNKDMNSSFKKALTGTNNNKSIADSINMKVLNGGAWGRGGS 522
Query: 449 --VTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQ 506
+ +LP E+ + ++Y H GR+L W + S + G + +L +T+Q
Sbjct: 523 ERIRFSLPRELEDFVPEMEAFYKKQHNGRKLCWMHHWSSGTMVFGTANGGRFDLECTTFQ 582
Query: 507 MCVLMLFNNA--DRLSYQ 522
M VL FN+ D++S +
Sbjct: 583 MAVLFCFNDRAHDKISLE 600
Score = 247 (92.0 bits), Expect = 1.6e-39, Sum P(2) = 1.6e-39
Identities = 84/310 (27%), Positives = 146/310 (47%)
Query: 21 HLKEISKSIEAAQ-GGSFLEELNRKWNDHNKALQMIRDILMYMD----RTYIPSTHKTPV 75
++ E +K I + Q GS L ++WN + ++ +D R +P T + +
Sbjct: 60 YVHEANKRIRSLQTDGSLLIGYIKEWNRFYQQANILPLPFKKIDESSRRRSVPETPEESI 119
Query: 76 HELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINR----GLMRNIIKMLMDLGP 131
+ L W + I+ N I +LL L LV ER G +I+ G+ + + + G
Sbjct: 120 RTVMLEKWNE-IIFMN-ISEQLLVEALRLVKEERDGNIIDAQNVIGIRESFVALNDRAGE 177
Query: 132 S---VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAK 188
VY++ FE+ F+E + E+YK + EY+ A+++L EE +R YL+
Sbjct: 178 DPLLVYRQSFERQFIEQTTEYYKKICGNLLNELGVLEYMVYADKKLEEEQQRAKRYLEMN 237
Query: 189 SEAKITNVVEKEMIANHMPRLVHMDNSGLV---NMLLDDK-YEDLGRMYNLFRRVPSGLL 244
S ++ EK +IA LV ++ + L+ K E L R+Y L RR SG+
Sbjct: 238 SPTSGKHM-EKAVIA-----LVESFEDTILAECSKLIASKDVERLQRLYRLIRRTRSGID 291
Query: 245 TIREVMTSHLRETG-KQLVTDPERLK-DPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNA 302
T+ + + +H+R G + + E L DP +VQ+LL DK+ +++ F +D A
Sbjct: 292 TVLKCIDTHIRTEGLNDMRNNAENLSTDPERYVQQLLLMFDKFSSLVREGFCDDARLLTA 351
Query: 303 LNSSFEYFIN 312
+ +F +N
Sbjct: 352 RDKAFRAVVN 361
Score = 37 (18.1 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 11/41 (26%), Positives = 22/41 (53%)
Query: 226 YEDLG-RMYNLFRRVPSGLLTIREVMT----SHLRETGKQL 261
++DL +Y + V G L IR+++T ++ E K++
Sbjct: 28 WQDLFYHVYKITSWVDDGPLKIRDILTRCINDYVHEANKRI 68
>FB|FBgn0039632 [details] [associations]
symbol:Cul-5 "Cullin-5" species:7227 "Drosophila
melanogaster" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0016360 "sensory organ precursor cell
fate determination" evidence=IMP] [GO:0007528 "neuromuscular
junction development" evidence=IMP] [GO:0007293 "germarium-derived
egg chamber formation" evidence=IMP] [GO:0008285 "negative
regulation of cell proliferation" evidence=IMP] [GO:0007295 "growth
of a germarium-derived egg chamber" evidence=IMP] [GO:0008582
"regulation of synaptic growth at neuromuscular junction"
evidence=IMP] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:AE014297 GO:GO:0008285 GO:GO:0007528 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 GO:GO:0016360 SUPFAM:SSF75632
GO:GO:0031461 GO:GO:0008582 GO:GO:0007293 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0007295
HSSP:Q9JLV5 CTD:43434 KO:K10612 OMA:EVTTFQM FlyBase:FBgn0039632
EMBL:BT133427 RefSeq:NP_651665.2 UniGene:Dm.5893 SMR:Q9VAQ0
IntAct:Q9VAQ0 MINT:MINT-906434 STRING:Q9VAQ0
EnsemblMetazoa:FBtr0085417 GeneID:43434 KEGG:dme:Dmel_CG1401
UCSC:CG1401-RA InParanoid:Q9VAQ0 GenomeRNAi:43434 NextBio:833902
Uniprot:Q9VAQ0
Length = 852
Score = 265 (98.3 bits), Expect = 3.9e-39, Sum P(2) = 3.9e-39
Identities = 62/217 (28%), Positives = 115/217 (52%)
Query: 316 RSPEFISLFVDDKLRKG--LKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQHLAKRL 373
+ PE ++ + D LR+ K ++ E ++ L V+++ +Y+ KDVF +Y+K HL +RL
Sbjct: 480 KCPELLANYCDMLLRRTPLSKRLTSEQIDARLRDVLLVLKYVNNKDVFMRYHKVHLTRRL 539
Query: 374 LSGKTVSDDAERSLIVKLKTECGY--QFTSKLEGMFTDMKTSQDTMHEFYASHPELGDSR 431
+ G + + E ++ L+ E G + ++L MF D+K S+D +F S +
Sbjct: 540 ILGTSADSEKEEDIVEWLR-EVGMPADYVNRLARMFQDIKVSEDLNTQFRTS---ISRHD 595
Query: 432 TLVVQVLTTGSWPT-QPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKA 490
+ +++L G+W V+ +LP E+ +Y H+GR+L W +M + I
Sbjct: 596 AINIKILNAGAWARCSERVSVSLPIELEDYIPDVEEFYKKKHSGRKLQWYHHMSNGTITF 655
Query: 491 TFGKGQKHELNVSTYQMCVLMLFNNA--DRLSYQGNR 525
G +++L+V+T+QM VL +N D++SY+ R
Sbjct: 656 VNNFG-RYDLDVTTFQMAVLFAWNQRQHDKISYENLR 691
Score = 234 (87.4 bits), Expect = 3.9e-39, Sum P(2) = 3.9e-39
Identities = 66/254 (25%), Positives = 134/254 (52%)
Query: 70 THKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDL 129
T +PV +L L+ W +I I+ RL + +++VH ER G+ + L+ + + ++L
Sbjct: 208 TEDSPVRKLMLDSWNKHIFHD--IKHRLQESAMKIVHAERNGDAYDAQLVVGVRESYVNL 265
Query: 130 GPS------VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTH 183
+ +Y+E+FE +L+ + EFY+++S + + Y+K A+ +L EE R
Sbjct: 266 SSNAEDKLEIYRENFEMAYLKATVEFYRLKSAEQQQENGVLAYMKYADSKLREEEVRAKR 325
Query: 184 YLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGL 243
YL+ S + +T + +I +H+ ++ + L+ D + E L M+ L RV G+
Sbjct: 326 YLEPSSFSILTYTLVNVLIVDHLNSII-AECPALIR---DYETERLNLMFRLMDRVMHGV 381
Query: 244 LTIREVMTS---HLRETG-KQLVTDPERL-KDPVEFVQRLLDEKDKYDNIISSAFNNDKT 298
+ +M H+ G +++ E + +D ++V+RLL+ +K+ +++ +AFN+D
Sbjct: 382 -GVEPMMGDLQRHIMSAGLADMLSASEVITQDSEKYVERLLELFNKFSDLVRNAFNDDPR 440
Query: 299 FQNALNSSFEYFIN 312
F A + +F+ +N
Sbjct: 441 FLTARDIAFKTVVN 454
>SGD|S000002290 [details] [associations]
symbol:CDC53 "Cullin" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA;IPI] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=IGI]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0030674 "protein binding, bridging" evidence=IMP;IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0003688 "DNA replication origin binding" evidence=IPI]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 SGD:S000002290
GO:GO:0005634 GO:GO:0005737 GO:GO:0000086 GO:GO:0051301
GO:GO:0000082 EMBL:BK006938 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0030674 GO:GO:0003688 GO:GO:0019005 eggNOG:COG5647
SUPFAM:SSF75632 EMBL:X96876 GO:GO:0042787 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0031146 EMBL:U43564 EMBL:Z74180 PIR:S67675
RefSeq:NP_010150.1 PDB:3O2P PDB:3O6B PDBsum:3O2P PDBsum:3O6B
ProteinModelPortal:Q12018 SMR:Q12018 DIP:DIP-1234N IntAct:Q12018
MINT:MINT-384023 STRING:Q12018 PaxDb:Q12018 PeptideAtlas:Q12018
EnsemblFungi:YDL132W GeneID:851424 KEGG:sce:YDL132W CYGD:YDL132w
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713 KO:K03347
OMA:SGVINCY OrthoDB:EOG4W3WW4 EvolutionaryTrace:Q12018
NextBio:968633 Genevestigator:Q12018 GermOnline:YDL132W
Uniprot:Q12018
Length = 815
Score = 297 (109.6 bits), Expect = 7.7e-38, Sum P(2) = 7.7e-38
Identities = 78/278 (28%), Positives = 142/278 (51%)
Query: 271 PVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEYFINLN--------PRSP---- 318
P +++++LL+ D + I + +F +D AL+++ FIN+N P+S
Sbjct: 376 PKDYIKKLLEVHDIFSKIFNESFPDDIPLAKALDNACGAFININEFALPAGSPKSATSKT 435
Query: 319 -EFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGK 377
E ++ + D L+K K D+ + ++ +F+YL +KD FE +Y++ AKRL+ G
Sbjct: 436 SEMLAKYSDILLKKATKPEVASDMSD--EDIITIFKYLTDKDAFETHYRRLFAKRLIHGT 493
Query: 378 TVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEFYAS---HPELGDSRTLV 434
+ S + E ++I +L+ ++T K+ MF D++ S+ +F + P+ ++
Sbjct: 494 STSAEDEENIIQRLQAANSMEYTGKITKMFQDIRLSKILEDDFAVALKNEPDYSKAKYPD 553
Query: 435 VQ--VLTTGSWP-TQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKAT 491
+Q VL WP + V LP E+ EK + Y H GR L W + ++KA
Sbjct: 554 LQPFVLAENMWPFSYQEVEFKLPKELVPSHEKLKESYSQKHNGRILKWLWPLCRGELKAD 613
Query: 492 FGKGQKHELN--VSTYQMCVLMLFNNADRLSYQGNRAG 527
GK + N V+ +QM +L+L+N+AD L+ + + G
Sbjct: 614 IGKPGRMPFNFTVTLFQMAILLLYNDADVLTLENIQEG 651
Score = 186 (70.5 bits), Expect = 7.7e-38, Sum P(2) = 7.7e-38
Identities = 67/274 (24%), Positives = 131/274 (47%)
Query: 7 GEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTY 66
G ++Y L + +LK + + + +FL+ ++W + YM+R +
Sbjct: 83 GSEIYEKLKN----YLKNYILNFKQSNSETFLQFYVKRWKRFTIGAIFLNHAFDYMNRYW 138
Query: 67 IPST------HKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR 120
+ H V+ L L W++ + +K L+N LL+ V R G++I R +
Sbjct: 139 VQKERSDGKRHIFDVNTLCLMTWKEVMFDPSK--DVLINELLDQVTLGREGQIIQRSNIS 196
Query: 121 NIIKMLMDLG--P--------SVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKA 170
IK L+ LG P +VY + FEKPFL+ + E+Y + ++E EY+ +A
Sbjct: 197 TAIKSLVALGIDPQDLKKLNLNVYIQVFEKPFLKKTQEYYTQYTNDYLEKHSVTEYIFEA 256
Query: 171 ERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDK-YEDL 229
+ E + +T Y D ++ ++ + K +I +H+ +L +N +V LLD + E +
Sbjct: 257 HEIIKREEKAMTIYWDDHTKKPLSMALNKVLITDHIEKL---ENEFVV--LLDARDIEKI 311
Query: 230 GRMYNLFRRVPSGLLTIREVMTSHLRETGKQLVT 263
+Y L RR + + + V +++++TG+ ++
Sbjct: 312 TSLYALIRRDFTLIPRMASVFENYVKKTGENEIS 345
>CGD|CAL0005748 [details] [associations]
symbol:orf19.7497 species:5476 "Candida albicans" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0031463 "Cul3-RING ubiquitin ligase
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 CGD:CAL0005748 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03869
EMBL:AACQ01000039 RefSeq:XP_718654.1 ProteinModelPortal:Q5AAJ3
STRING:Q5AAJ3 GeneID:3639684 KEGG:cal:CaO19.7497 Uniprot:Q5AAJ3
Length = 859
Score = 264 (98.0 bits), Expect = 5.8e-35, Sum P(3) = 5.8e-35
Identities = 64/235 (27%), Positives = 132/235 (56%)
Query: 1 MVLHKFGEKLYSGLVSTMTLHL---KEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRD 57
+VL KFG KLY + + + HL +E S+ +A F++ + ++W++H +A++ I D
Sbjct: 70 LVLRKFGGKLYDNVANVIKTHLLTRREKLLSV-SANHDLFMQSILQEWSEHLQAMKFISD 128
Query: 58 ILMYMDRTYIPSTHKTPVHELGLNLWRDNIVRSN--KIQTRLLNTLLELVHRERTGEVIN 115
+LMY+++ Y+ K +++LG+ L++D +++ N ++ ++++N +++ + + RTG VI
Sbjct: 129 VLMYLNKVYVAEHKKLLIYDLGIQLFKDYVIKYNNDEVGSKIVNMVIDEIAKSRTGVVIT 188
Query: 116 RGL----MRNIIKMLMD--------LGPSVYQEDFEKPFLEVSAE-FYKVESQKFIECCD 162
+ + N++++L++ G S YQ FE FL+ S E Y + SQ+F+
Sbjct: 189 SSMYITKIINMMELLVEPSGSSDILFGDSYYQIKFEPKFLKSSEESLYNL-SQEFVSHNL 247
Query: 163 CGEYLKKAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGL 217
+YL+ + + +E RV YL + K+ ++ MI + + +++ N GL
Sbjct: 248 GTKYLQLTTQFIKDEDNRVRFYLPPSTYPKLVELMNNIMIKDKIDKMILSSNQGL 302
Score = 164 (62.8 bits), Expect = 5.8e-35, Sum P(3) = 5.8e-35
Identities = 62/278 (22%), Positives = 129/278 (46%)
Query: 193 ITNVVEKEMIANHMPRLVHMDNSGLVNML--LDDKYEDLGRMYNLFRRVPSGLLTIREVM 250
++N+ E I + + D L N++ DD+Y+ L R+ L + + ++ + +
Sbjct: 310 VSNIFEDTNIETYH----YADLKMLYNLIGRFDDEYQLL-RL-RLKEAIVAQGNSLPDYV 363
Query: 251 TSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEYF 310
S + +GK+ + ++++ +L +D+ + ++F+ + + + F
Sbjct: 364 RSSIENSGKKQSNNSPAFA--TKWIETILKYRDQLMQVWKNSFDENLMIEQTFTFAMRDF 421
Query: 311 IN-LNPR------SPEFISLFVDDKLRKGLKGVSE-EDV--------ETILDKVMMLFRY 354
IN N R +PE +S+++D +++ KG S +D+ E ++ + R+
Sbjct: 422 INGSNKRGPASVNAPELLSVYMDYFIKQLTKGSSSNKDISLKSGDQTEDLISNSIQFLRF 481
Query: 355 LQEKDVFEKYYKQHLAKRLLSGKTVSD-----DAERSLIVKLKTECGYQFTSKLEGMFTD 409
+++KD FE Y H AKR L+ KT + D E ++ KL E G K+ M D
Sbjct: 482 IKDKDAFEANYANHFAKRFLNSKTGNSPSSNKDIEEIILAKLSEEMGTSSLDKVIKMNRD 541
Query: 410 MKTSQDTMHEFYASHPELGDSRTLV---VQVLTTGSWP 444
+++S+DT +++ + S LV +++ WP
Sbjct: 542 VRSSKDTTNDWKRYLNKQSKSTDLVEMELKICNVTDWP 579
Score = 74 (31.1 bits), Expect = 5.8e-35, Sum P(3) = 5.8e-35
Identities = 17/70 (24%), Positives = 36/70 (51%)
Query: 454 PAEMSALCEKFRSYYLG--THTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLM 511
P ++ ++F ++ + + L W GS D++ T+ + +E+N+ST+ +++
Sbjct: 602 PRQLRNTIKQFDEFWSNGKKNDNKSLYWSPKFGSMDLRITY-PSRTYEINLSTFAAIIML 660
Query: 512 LF----NNAD 517
LF NAD
Sbjct: 661 LFAPQSTNAD 670
>ASPGD|ASPL0000052453 [details] [associations]
symbol:culD species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0043494 "CLRC ubiquitin ligase complex"
evidence=IEA] [GO:0008180 "signalosome" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0031048
"chromatin silencing by small RNA" evidence=IEA] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=IEA]
[GO:0045836 "positive regulation of meiosis" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] [GO:0051570 "regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0031507 "heterochromatin assembly" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 EMBL:BN001308 GO:GO:0016874
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
HOGENOM:HOG000176712 OMA:FEDSLDF EnsemblFungi:CADANIAT00002720
Uniprot:C8VRE7
Length = 880
Score = 379 (138.5 bits), Expect = 1.7e-32, P = 1.7e-32
Identities = 123/433 (28%), Positives = 211/433 (48%)
Query: 108 ERTGEVINRGLMRNIIKMLMDLGPSVYQEDFEKPFLEVSAEFYKVESQK----FIECCDC 163
+ G V + L+RN I++ L VY FE + S +F+ + +Q+ ++
Sbjct: 300 DENGIVADSSLLRNAIELFHSL--DVYVSGFEPVLVSGSKDFFSLWAQQEATGYLASYVE 357
Query: 164 GEYLKKAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHM-DNSGLVNM-- 220
+ + ER +N E+ + + ++ K++ +++ ++ + L+ D GL+ +
Sbjct: 358 NSH-RLIEREMNR-CEQFS--FNRTTKQKLSESLDQTLVTDQESVLLSQKDVLGLLRIGN 413
Query: 221 --LLDDKYEDLGRMYNLFRRVPSGLLT--IREVMTSHLRETGKQLVTDPERLKDPVEFVQ 276
L Y L R +L ++ T + E E+ +V RL + +
Sbjct: 414 KIALGQLYTLLERR-DLGAKLKGAFSTYIVEEGTGIVFDESEADMVV---RLLSFKKQLD 469
Query: 277 RLLDEKDKYDNIISSAFNND-KTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLK- 334
+ +E + + + A ++F N S NP++ E I+ +VD LR G +
Sbjct: 470 DIWNESFRRNEGLGHALRESFESFMNKGRKSDATGGTDNPKTGEMIAKYVDRLLRGGWRL 529
Query: 335 ---------GVSEEDVETI--LDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDA 383
+++ED E LD+V+ LFR++ K VFE +YK LA+RLL G++ SDDA
Sbjct: 530 APTREAENMPLADEDAEINRQLDQVLDLFRFVHGKAVFEAFYKNDLARRLLMGRSASDDA 589
Query: 384 ERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEFYASHPELGDSRT--LVVQVLTTG 441
E+S++ +LKTECG FT LE MF DM+ ++D M + + E L V VL+
Sbjct: 590 EKSMLARLKTECGSSFTHNLESMFKDMEVARDEMSAYNSIKRERQTPLPVDLHVSVLSAS 649
Query: 442 SWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELN 501
+WPT P V +P E++ F +Y + GR+L+W+ + ++A F G K EL
Sbjct: 650 AWPTYPDVQVRIPPEIATAISDFEKFYDTKYNGRKLAWKHQLAHCQLRARFPNGNK-ELV 708
Query: 502 VSTYQMCVLMLFN 514
VS++Q VL+LFN
Sbjct: 709 VSSFQAIVLLLFN 721
Score = 243 (90.6 bits), Expect = 4.7e-17, P = 4.7e-17
Identities = 91/366 (24%), Positives = 172/366 (46%)
Query: 17 TMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPSTHKTPV- 75
T LH + K+ + A L + W + L +R I Y+D++++ + + PV
Sbjct: 206 TGKLHGSLVDKA-QMAYNIETLRSVVEAWKEWQSMLITVRWIFYYLDQSFLLHSKEHPVI 264
Query: 76 HELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGE---VINRGLMRNIIKMLMDLGPS 132
E+GL +R +I +Q ++L +LV +R+ E V + L+RN I++ L
Sbjct: 265 REMGLQQFRQHIYSDPTLQEKILQGACDLVSADRSDENGIVADSSLLRNAIELFHSL--D 322
Query: 133 VYQEDFEKPFLEVSAEFYKVESQKFIECCD-CGEYLKKAERRLNEEMERVTHY-LDAKSE 190
VY FE + S +F+ + +Q+ E Y++ + R + EM R + + ++
Sbjct: 323 VYVSGFEPVLVSGSKDFFSLWAQQ--EATGYLASYVENSHRLIEREMNRCEQFSFNRTTK 380
Query: 191 AKITNVVEKEMIANHMPRLVHM-DNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREV 249
K++ +++ ++ + L+ D GL+ + +K LG++Y L R G ++
Sbjct: 381 QKLSESLDQTLVTDQESVLLSQKDVLGLLR--IGNKIA-LGQLYTLLERRDLGA-KLKGA 436
Query: 250 MTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEY 309
++++ E G +V D + + V RLL K + D+I + +F ++ +AL SFE
Sbjct: 437 FSTYIVEEGTGIVFD----ESEADMVVRLLSFKKQLDDIWNESFRRNEGLGHALRESFES 492
Query: 310 FINL-----------NPRSPEFISLFVDDKLRKGLKGVSEEDVET--ILDKVMMLFRYL- 355
F+N NP++ E I+ +VD LR G + + E + D+ + R L
Sbjct: 493 FMNKGRKSDATGGTDNPKTGEMIAKYVDRLLRGGWRLAPTREAENMPLADEDAEINRQLD 552
Query: 356 QEKDVF 361
Q D+F
Sbjct: 553 QVLDLF 558
>TAIR|locus:2025881 [details] [associations]
symbol:AT1G59790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC007258 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03347
HOGENOM:HOG000176712 IPI:IPI00517906 PIR:H96621 RefSeq:NP_176188.1
UniGene:At.52273 ProteinModelPortal:Q9XIE9 SMR:Q9XIE9 PRIDE:Q9XIE9
EnsemblPlants:AT1G59790.1 GeneID:842272 KEGG:ath:AT1G59790
TAIR:At1g59790 OMA:QNELLVM ProtClustDB:CLSN2679703
Genevestigator:Q9XIE9 Uniprot:Q9XIE9
Length = 374
Score = 332 (121.9 bits), Expect = 1.4e-29, P = 1.4e-29
Identities = 81/298 (27%), Positives = 151/298 (50%)
Query: 8 EKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYI 67
EK Y ++ T+ + + S+ L EL ++WN+H ++ + +Y+DR ++
Sbjct: 68 EK-YRKVIEDYTI--QTVLPSLREKHDEDMLRELVKRWNNHKIMVKWLSKFFVYIDR-HL 123
Query: 68 PSTHKTPV---HELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIK 124
K P+ E+GL + D + ++Q+ ++ L+H+ER GE I+R L++N++
Sbjct: 124 VRRSKIPIPSLDEVGLTCFLDLVYC--EMQSTAKEVVIALIHKEREGEQIDRALVKNVLD 181
Query: 125 MLMDLGPSV---YQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERV 181
+ ++ G Y+EDFE L+ +A +Y ++ ++ E C +Y+ K E L E ERV
Sbjct: 182 IYVENGMGTLEKYEEDFESFMLQDTASYYSRKASRWTEEDSCPDYMIKVEECLKMERERV 241
Query: 182 THYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPS 241
THYL + +E K+ ++ E++ + ++SG +L DDK DL R+Y L+ +P
Sbjct: 242 THYLHSITEPKLVEKIQNELLVMVTKNRLENEHSGFSALLRDDKKNDLSRIYRLYLPIPK 301
Query: 242 GLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTF 299
L + ++ H+ E G L+ + D Q L++ +K+ + F N F
Sbjct: 302 RLGRVADLFKKHITEEGNALI----KQADDKTTNQLLIELHNKFIVYVIECFQNHTLF 355
>SGD|S000003235 [details] [associations]
symbol:CUL3 "Ubiquitin-protein ligase" species:4932
"Saccharomyces cerevisiae" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA;IC;ISS] [GO:0031461 "cullin-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0031463 "Cul3-RING
ubiquitin ligase complex" evidence=IMP;IDA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IMP] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 SGD:S000003235 GO:GO:0005634 GO:GO:0005737
EMBL:BK006941 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0004842
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0042787 GO:GO:0031463
InterPro:IPR016159 SUPFAM:SSF74788 KO:K03869 OrthoDB:EOG48H0BR
EMBL:AY387706 EMBL:Z72788 PIR:S64292 RefSeq:NP_011517.1
ProteinModelPortal:P53202 SMR:P53202 DIP:DIP-5506N IntAct:P53202
MINT:MINT-531464 STRING:P53202 PaxDb:P53202 EnsemblFungi:YGR003W
GeneID:852886 KEGG:sce:YGR003W CYGD:YGR003w HOGENOM:HOG000112081
OMA:SERSMLV NextBio:972541 Genevestigator:P53202 GermOnline:YGR003W
Uniprot:P53202
Length = 744
Score = 336 (123.3 bits), Expect = 1.4e-27, P = 1.4e-27
Identities = 136/546 (24%), Positives = 244/546 (44%)
Query: 1 MVLHKFGEKLYSGLVSTMTLHLKEISKSI--EAAQGGSFLEELNRKWNDHNKALQMIRDI 58
+VL+K G LY+ L + L + ++I + FL + R W ++ D+
Sbjct: 56 IVLNKKGPILYNRLKDYLIQKLALLRETIVKDNTHDYEFLGTMARLWEVQCHCFKITGDL 115
Query: 59 LMYMDRTYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERT-GEVINR- 116
+MYMD+ Y V+++ L+L+R I++ K + L++ L+ + R R G V +
Sbjct: 116 MMYMDKVYCKPNRCMEVYDMCLDLFRIEILQ--KCSSSLISALISDIERIRNLGSVDSEH 173
Query: 117 -GLMRNIIKM---LMDLGPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAER 172
L + +I M L D S + DFE + + E+Y IE E L+K +
Sbjct: 174 TSLWKVLIGMMETLHDNRDSFFLTDFEPVLISATEEYYNKAID--IELLTPIESLEKIRK 231
Query: 173 RLNEEMERVTHYLDAKSEAKITNVVEKEMI----ANHMPRLVH----MDNSGLVNMLLDD 224
E + +L+ S K+ V+E +I ++ + L H + N L+ + D
Sbjct: 232 LRQFESMLDSSFLNVDSHNKLKTVLENVLIWGKLSDIIEDLTHEAMVISNGKLLQEIYDL 291
Query: 225 KYEDLGRMYNLFRRVPSGLL--TIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEK 282
E+ R+ + + S + I R+ G+ +T + + L+
Sbjct: 292 SSEEKYRV-TVIESIKSYINKNAINIPFNEGNRKKGQNAITWSSEIVELYRSQHSFLESI 350
Query: 283 DKYDNIISSAFNNDKTFQNA-LNSSFEYFINLNPRSP-EFISLFVDDKLRKGLKGVSE-- 338
D + ++ + D + NA L F + + P E++S +VD +++ + +E
Sbjct: 351 D-FGSVRLNNLTGDVS--NAILGDVFSMYFSKEGALPSEYLSTYVDHCMKRTKEKDAEIV 407
Query: 339 EDVETILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQ 398
+ + +LD ++ L EKD+FEK YK+ L++RLL +++ + E+ ++ +K G
Sbjct: 408 KIKQDLLDSTKLI-GLLTEKDIFEKIYKKQLSRRLLQQRSLVE-IEKWMVQMIKKVLGTF 465
Query: 399 FTSKLEGMFTDMKTSQDTMHEFYASHPELGDSRTLVVQVLTTGSWP---TQP-SVTCNLP 454
FTSKLE M D+ S + F S + + QVLT SWP T P +LP
Sbjct: 466 FTSKLEIMLRDISLSSEMYQAFQHSTINSIEYLSFAPQVLTRTSWPFQSTNPIDEGISLP 525
Query: 455 AEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFN 514
MS + F YY + R L W ++ +I F G +E++ S Y + +LF
Sbjct: 526 PRMSQILAGFEGYYSLKYKERVLKWAHHLSVIEIGCQFNSGY-YEISFSVYAGVIFLLFE 584
Query: 515 NADRLS 520
+ + L+
Sbjct: 585 DYEELT 590
>UNIPROTKB|A6NE76 [details] [associations]
symbol:CUL4B "Cullin-4B" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 Pfam:PF00888 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 EMBL:AC002476
EMBL:AL451005 HGNC:HGNC:2555 IPI:IPI00644450
ProteinModelPortal:A6NE76 SMR:A6NE76 STRING:A6NE76 PRIDE:A6NE76
Ensembl:ENST00000371323 HOGENOM:HOG000006909 HOVERGEN:HBG084579
ArrayExpress:A6NE76 Bgee:A6NE76 Uniprot:A6NE76
Length = 234
Score = 295 (108.9 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 63/181 (34%), Positives = 106/181 (58%)
Query: 4 HKFGEKLYSGLVSTMTLHLK-EISKSIE-AAQGGSFLEELNRKWNDHNKALQMIRDILMY 61
+K LY L H+K +I + E + FL++++R W +H + + MIR I ++
Sbjct: 54 YKISANLYKQLRQICEDHIKAQIHQFREDSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLF 113
Query: 62 MDRTYIPSTHKTP-VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR 120
+DRTY+ P + ++GL L+R +I+ K+Q + ++ +L L+ RER GE I+R L+R
Sbjct: 114 LDRTYVLQNSMLPSIWDMGLELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLR 173
Query: 121 NIIKMLMDLGPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMER 180
+++ ML DL +YQ+ FE+ FLE + Y E QK ++ + EYL +RL EE +R
Sbjct: 174 SLLSMLSDL--QIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADR 231
Query: 181 V 181
+
Sbjct: 232 L 232
>UNIPROTKB|K7GPT4 [details] [associations]
symbol:LOC100739075 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 SUPFAM:SSF75632
GeneTree:ENSGT00550000074299 EMBL:CU468368
Ensembl:ENSSSCT00000035259 Uniprot:K7GPT4
Length = 278
Score = 286 (105.7 bits), Expect = 1.7e-24, P = 1.7e-24
Identities = 58/130 (44%), Positives = 82/130 (63%)
Query: 395 CGYQFTSKLEGMFTDMKTSQDTMHEF--YASHPELGDSRTLVVQVLTTGSWPTQPSVTCN 452
CG FTSKLEGMF DM+ S+D M +F Y + + + L V +LT G WPT + +
Sbjct: 2 CGAAFTSKLEGMFKDMELSKDIMIQFKQYMQNQNVPGNIELTVNILTMGYWPTYVPMEVH 61
Query: 453 LPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLML 512
LP EM L E F+++YLG H+GR+L WQ+ +G +KA F +G+K EL VS +Q VL++
Sbjct: 62 LPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKK-ELQVSLFQTLVLLM 120
Query: 513 FNNADRLSYQ 522
FN + S +
Sbjct: 121 FNEGEEFSLE 130
>TAIR|locus:2025941 [details] [associations]
symbol:AT1G59800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC007258 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03347
HOGENOM:HOG000176712 IPI:IPI00546899 PIR:A96622 RefSeq:NP_176189.1
UniGene:At.52274 ProteinModelPortal:Q9XIE8 SMR:Q9XIE8
EnsemblPlants:AT1G59800.1 GeneID:842273 KEGG:ath:AT1G59800
TAIR:At1g59800 eggNOG:NOG310081 InParanoid:Q9XIE8 OMA:DECMLRE
PhylomeDB:Q9XIE8 ProtClustDB:CLSN2913533 Genevestigator:Q9XIE8
Uniprot:Q9XIE8
Length = 255
Score = 269 (99.8 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 56/178 (31%), Positives = 101/178 (56%)
Query: 22 LKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPSTHKTPVHELGLN 81
++ + S+ L EL ++WN H +++ L+Y+D +++ + E+GLN
Sbjct: 72 IQTVLPSLREKHDECMLRELAKRWNAHKLLVRLFSRRLVYLDDSFLSKKGLPSLREVGLN 131
Query: 82 LWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLGPSV---YQEDF 138
+RD + R ++Q+ +L L+H+ER GE I+R L+RN+I + ++ G Y+EDF
Sbjct: 132 CFRDQVYR--EMQSMAAEAILALIHKEREGEQIDRELVRNVIDVFVENGMGTLKKYEEDF 189
Query: 139 EKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAKITNV 196
E+ L+ +A +Y ++ ++I+ C +Y K ++ L E ERVTHYL +E K+ V
Sbjct: 190 ERLMLQDTASYYSSKASRWIQEESCLDYTLKPQQCLQRERERVTHYLHPTTEPKLFEV 247
>ZFIN|ZDB-GENE-030131-5426 [details] [associations]
symbol:cul5a "cullin 5a" species:7955 "Danio
rerio" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-030131-5426 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:BX572630
IPI:IPI00836478 Ensembl:ENSDART00000110111 ArrayExpress:F1REN0
Bgee:F1REN0 Uniprot:F1REN0
Length = 780
Score = 279 (103.3 bits), Expect = 4.0e-21, P = 4.0e-21
Identities = 106/393 (26%), Positives = 189/393 (48%)
Query: 155 QKFIECCDCG--EYLKKAERRLNEEMERVTHYLDAKSEAKITNVVE--KEMIANHMPRLV 210
Q +++ D E K+A R L E R + + A E + +V KE I P ++
Sbjct: 228 QNYMKYADAKLREEEKRALRYL--ETRRECNSVQALMECCVNALVTSFKETILAECPGMI 285
Query: 211 HMDNSGLVNML--LDDKYED-LGRMYNLFRR--VPSGL---LTIREVMTSHLRETGKQLV 262
+ + ++++ L DK + + M + +GL + E +T+ + +QL+
Sbjct: 286 KRNETDKLHLMFSLMDKVPNGIEPMLKDLEEHIISAGLADMVAAAETITTDSEKYVEQLL 345
Query: 263 TDPER----LKDPVEFVQRLLDEKDK-YDNIISSAFNNDKT-FQNALNSSFEYF-INLNP 315
T R +K+ + R L +DK Y ++ ND T F+ L + + P
Sbjct: 346 TLFNRFSKLVKEAFQDDPRFLTARDKAYKAVV-----NDATIFKLELPMKQKGVGLKTQP 400
Query: 316 RS--PEFISLFVDDKLRKG--LKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQHLAK 371
S PE ++ + D LRK K ++ ED+E L +V+++ +Y+Q KDVF +Y+K HL +
Sbjct: 401 ESKCPELLANYCDMLLRKTPLSKKLTSEDIELKLKEVLLVLKYVQNKDVFMRYHKAHLTR 460
Query: 372 RLLSGKTVSDDAERSLIVKLKTECGY--QFTSKLEGMFTDMKTSQDTMHEFYASHP--EL 427
RL+ + + E +++ L+ E G + +KL MF D+K S+D F H +L
Sbjct: 461 RLILDISADSEIEENMVEWLR-EVGMPADYVNKLARMFQDIKVSEDLNQVFKEMHKHNKL 519
Query: 428 G-DSRTLVVQVLTTGSWP-TQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGS 485
+ ++ +++L G+W + V +LP E+ L + +Y H+GR+L W M +
Sbjct: 520 ALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEDFYKKNHSGRKLHWHHLMSN 579
Query: 486 ADIKATFGKGQKHELNVSTYQMCVLMLFNNADR 518
I GQ ++L V+T+Q+ VL +N R
Sbjct: 580 GIITFKNEVGQ-YDLEVTTFQLAVLFAWNQRPR 611
Score = 230 (86.0 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 60/249 (24%), Positives = 127/249 (51%)
Query: 75 VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDL--GPS 132
V +L L+ W ++I SN I+ RL ++ ++LVH ER GE + L+ + + ++L P
Sbjct: 135 VRKLMLDTWNESIF-SN-IKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPE 192
Query: 133 ----VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAK 188
+Y+++FEK +L+ + FY+ ++ +++ Y+K A+ +L EE +R YL+ +
Sbjct: 193 DKLQIYRDNFEKSYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLREEEKRALRYLETR 252
Query: 189 SEAKITNVVEK---EMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLT 245
E + + + + + G++ DK L M++L +VP+G+
Sbjct: 253 RECNSVQALMECCVNALVTSFKETILAECPGMIKRNETDK---LHLMFSLMDKVPNGIEP 309
Query: 246 IREVMTSHLRETG-KQLVTDPERLK-DPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNAL 303
+ + + H+ G +V E + D ++V++LL +++ ++ AF +D F A
Sbjct: 310 MLKDLEEHIISAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTAR 369
Query: 304 NSSFEYFIN 312
+ +++ +N
Sbjct: 370 DKAYKAVVN 378
>ZFIN|ZDB-GENE-091113-45 [details] [associations]
symbol:cul5b "cullin 5b" species:7955 "Danio rerio"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-091113-45 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:CT827807
IPI:IPI00897211 Ensembl:ENSDART00000130179 Bgee:F1QFY1
Uniprot:F1QFY1
Length = 795
Score = 276 (102.2 bits), Expect = 8.9e-21, P = 8.9e-21
Identities = 112/428 (26%), Positives = 200/428 (46%)
Query: 118 LMRNIIKMLMDLGPSVYQEDFEKP--FLEVSAEFYKVESQKFIECCDCGEYLKKAERRLN 175
L +N ++ M +E+ ++ +LE E V Q +ECC + + +
Sbjct: 222 LQQNGVQNYMKYADGKLREEEKRALRYLETRRECNSV--QALMECC-VNALVTSFKETIL 278
Query: 176 EEMERVTHYLDAKSEAKITNVVEKEMIAN-H-MPRLVHMDNSGLVNMLLDDKYEDLGRMY 233
E + + +SE ++ + + H M L+ SG+ ML D ED
Sbjct: 279 TECPGMIKRNETESEYGRSSGTKGSASSELHLMFSLMDKVPSGIEPMLKD--LEDHIMSA 336
Query: 234 NLFRRVPSGLLTIREVMTSHLRETGKQLVTDPER----LKDPVEFVQRLLDEKDK-YDNI 288
L V S E +T+ + +QL+T R +K+ + R L +DK Y +
Sbjct: 337 GLADMVASA-----ETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTSRDKAYKAV 391
Query: 289 ISSAFNNDKT-FQNALNSSFE-YFINLNPRS--PEFISLFVDDKLRKG--LKGVSEEDVE 342
+ ND T F+ L + + P S PE ++ + D LRK K ++ E++E
Sbjct: 392 V-----NDATIFKLELPLKQKGVSLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIE 446
Query: 343 TILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGY--QFT 400
L +V+++ +Y+Q KDVF +Y+K HL +RL+ + + E +++ L+ E G +
Sbjct: 447 AKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLR-EVGMPADYV 505
Query: 401 SKLEGMFTDMKTSQDTMHEFYASHP--ELG-DSRTLVVQVLTTGSWP-TQPSVTCNLPAE 456
+KL MF D+K S+D F H +L + ++ +++L G+W + V +LP E
Sbjct: 506 NKLARMFQDIKVSEDLNQSFKEMHKHNKLALPADSVNIKILNAGAWSRSSEKVFVSLPTE 565
Query: 457 MSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNA 516
+ L + +Y H+GR+L W M + I GQ ++L V+T+Q+ VL +N
Sbjct: 566 LEDLIPEVEDFYKKNHSGRKLHWHHLMSNGIITFKNEVGQ-YDLEVTTFQLAVLFAWNQR 624
Query: 517 --DRLSYQ 522
+R+S++
Sbjct: 625 PRERISFE 632
Score = 184 (69.8 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 60/255 (23%), Positives = 121/255 (47%)
Query: 75 VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLGPS-- 132
V +L L+ W ++I + I++RL ++ ++LVH ER GE + L+ + + ++L +
Sbjct: 135 VRKLMLDTWNESIFCN--IKSRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNTD 192
Query: 133 ----VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAK 188
+Y+E+FEK +L+ + FYK ++ +++ Y+K A+ +L EE +R YL+ +
Sbjct: 193 DKLQIYRENFEKSYLDSTERFYKTQAPSYLQQNGVQNYMKYADGKLREEEKRALRYLETR 252
Query: 189 SEAK-ITNVVE----------KEMIANHMPRLVHMDNS----GLVNMLLDDKYEDLGRMY 233
E + ++E KE I P ++ + + G + +L M+
Sbjct: 253 RECNSVQALMECCVNALVTSFKETILTECPGMIKRNETESEYGRSSGTKGSASSELHLMF 312
Query: 234 NLFRRVPSGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAF 293
+L +VPSG+ + + + H+ G L D V + + + +KY + + F
Sbjct: 313 SLMDKVPSGIEPMLKDLEDHIMSAG---------LADMVASAETITTDSEKYVEQLLTLF 363
Query: 294 NNDKTFQNALNSSFE 308
N F + +F+
Sbjct: 364 NR---FSKLVKEAFQ 375
>UNIPROTKB|H7C1L6 [details] [associations]
symbol:CUL3 "Cullin-3" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 Pfam:PF00888 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 EMBL:AC073052
EMBL:AC092679 HGNC:HGNC:2553 ChiTaRS:CUL3 Ensembl:ENST00000436172
Uniprot:H7C1L6
Length = 192
Score = 251 (93.4 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 50/108 (46%), Positives = 71/108 (65%)
Query: 1 MVLHKFGEKLYSGLVSTMTLHL-KEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDIL 59
MVLHK GEKLY+GL +T HL ++ + + + +FL+ LN+ WNDH A+ MIRDIL
Sbjct: 85 MVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDIL 144
Query: 60 MYMDRTYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHR 107
MYMDR Y+ + V+ LGL ++RD +VR I+ L TLL+++ R
Sbjct: 145 MYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIAR 192
>UNIPROTKB|F1P9Q4 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
Pfam:PF00888 PROSITE:PS50069 SMART:SM00182 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
EMBL:AAEX03003515 Ensembl:ENSCAFT00000023239 Uniprot:F1P9Q4
Length = 715
Score = 270 (100.1 bits), Expect = 3.4e-20, P = 3.4e-20
Identities = 83/293 (28%), Positives = 148/293 (50%)
Query: 243 LLTIREVMTSHLRETGKQLVTDPER----LKDPVEFVQRLLDEKDK-YDNIISSAFNNDK 297
++ E +T+ + +QL+T R +K+ + R L +DK Y ++ ND
Sbjct: 336 MVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVV-----NDA 390
Query: 298 T-FQNALNSSFEYF-INLNPRS--PEFISLFVDDKLRKG--LKGVSEEDVETILDKVMML 351
T F+ L + + P S PE ++ + D LRK K ++ E++E L +V+++
Sbjct: 391 TIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLV 450
Query: 352 FRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGY--QFTSKLEGMFTD 409
+Y+Q KDVF +Y+K HL +RL+ + + E +++ L+ E G + +KL MF D
Sbjct: 451 LKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLR-EVGMPADYVNKLARMFQD 509
Query: 410 MKTSQDTMHEFYASHP--ELG-DSRTLVVQVLTTGSWP-TQPSVTCNLPAEMSALCEKFR 465
+K S+D F H +L + ++ +++L G+W + V +LP E+ L +
Sbjct: 510 IKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVE 569
Query: 466 SYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADR 518
+Y H+GR+L W M + I GQ ++L V+T+Q+ VL +N R
Sbjct: 570 EFYKKNHSGRKLHWHHLMSNGIITFKNEVGQ-YDLEVTTFQLAVLFAWNQRPR 621
Score = 178 (67.7 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 60/255 (23%), Positives = 123/255 (48%)
Query: 75 VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDL--GPS 132
V +L L+ W ++I SN I+ RL ++ ++LVH ER GE + L+ + + ++L P
Sbjct: 130 VRKLMLDTWNESIF-SN-IKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPE 187
Query: 133 ----VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAK 188
+Y+++FEK +L+ + FY+ ++ +++ Y+K A+ +L EE +R YL+ +
Sbjct: 188 DKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETR 247
Query: 189 SEAK-ITNVVE----------KEMIANHMPRLVHMDN--SGLVNMLLDDK--YEDLGRMY 233
E + ++E KE I ++ + S + ++D + +L M+
Sbjct: 248 RECNSVEALMECCVNALVTSFKETILAECQGMIKRNETESRYQYLCVEDGSGFSELHLMF 307
Query: 234 NLFRRVPSGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAF 293
+L +VP+G+ + + + H+ G L D V + + + +KY + + F
Sbjct: 308 SLMDKVPNGIEPMLKDLEEHIISAG---------LADMVAAAETITTDSEKYVEQLLTLF 358
Query: 294 NNDKTFQNALNSSFE 308
N F + +F+
Sbjct: 359 NR---FSKLVKEAFQ 370
>UNIPROTKB|F1N7B5 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031466 "Cul5-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031466 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:EVTTFQM EMBL:DAAA02040193
EMBL:DAAA02040192 IPI:IPI00924344 Ensembl:ENSBTAT00000061240
ArrayExpress:F1N7B5 Uniprot:F1N7B5
Length = 759
Score = 270 (100.1 bits), Expect = 3.8e-20, P = 3.8e-20
Identities = 83/293 (28%), Positives = 148/293 (50%)
Query: 243 LLTIREVMTSHLRETGKQLVTDPER----LKDPVEFVQRLLDEKDK-YDNIISSAFNNDK 297
++ E +T+ + +QL+T R +K+ + R L +DK Y ++ ND
Sbjct: 305 MVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVV-----NDA 359
Query: 298 T-FQNALNSSFEYF-INLNPRS--PEFISLFVDDKLRKG--LKGVSEEDVETILDKVMML 351
T F+ L + + P S PE ++ + D LRK K ++ E++E L +V+++
Sbjct: 360 TIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLV 419
Query: 352 FRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGY--QFTSKLEGMFTD 409
+Y+Q KDVF +Y+K HL +RL+ + + E +++ L+ E G + +KL MF D
Sbjct: 420 LKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLR-EVGMPADYVNKLARMFQD 478
Query: 410 MKTSQDTMHEFYASHP--ELG-DSRTLVVQVLTTGSWP-TQPSVTCNLPAEMSALCEKFR 465
+K S+D F H +L + ++ +++L G+W + V +LP E+ L +
Sbjct: 479 IKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVE 538
Query: 466 SYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADR 518
+Y H+GR+L W M + I GQ ++L V+T+Q+ VL +N R
Sbjct: 539 EFYKKNHSGRKLHWHHLMSNGIITFKNEVGQ-YDLEVTTFQLAVLFAWNQRPR 590
Score = 231 (86.4 bits), Expect = 7.6e-16, P = 7.6e-16
Identities = 59/246 (23%), Positives = 127/246 (51%)
Query: 75 VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDL--GPS 132
V +L L+ W ++I SN I+ RL ++ ++LVH ER GE + L+ + + ++L P
Sbjct: 114 VRKLMLDTWNESIF-SN-IKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPE 171
Query: 133 ----VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAK 188
+Y+++FEK +L+ + FY+ ++ +++ Y+K A+ +L EE +R YL+ +
Sbjct: 172 DKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETR 231
Query: 189 SEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIRE 248
E + + + + + M+ ++ E L M++L +VP+G+ + +
Sbjct: 232 RECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLK 291
Query: 249 VMTSHLRETG-KQLVTDPERLK-DPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSS 306
+ H+ G +V E + D ++V++LL +++ ++ AF +D F A + +
Sbjct: 292 DLEEHIISAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKA 351
Query: 307 FEYFIN 312
++ +N
Sbjct: 352 YKAVVN 357
>UNIPROTKB|J9PAX0 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:EVTTFQM EMBL:AAEX03003515
Ensembl:ENSCAFT00000043293 Uniprot:J9PAX0
Length = 759
Score = 270 (100.1 bits), Expect = 3.8e-20, P = 3.8e-20
Identities = 83/293 (28%), Positives = 148/293 (50%)
Query: 243 LLTIREVMTSHLRETGKQLVTDPER----LKDPVEFVQRLLDEKDK-YDNIISSAFNNDK 297
++ E +T+ + +QL+T R +K+ + R L +DK Y ++ ND
Sbjct: 305 MVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVV-----NDA 359
Query: 298 T-FQNALNSSFEYF-INLNPRS--PEFISLFVDDKLRKG--LKGVSEEDVETILDKVMML 351
T F+ L + + P S PE ++ + D LRK K ++ E++E L +V+++
Sbjct: 360 TIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLV 419
Query: 352 FRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGY--QFTSKLEGMFTD 409
+Y+Q KDVF +Y+K HL +RL+ + + E +++ L+ E G + +KL MF D
Sbjct: 420 LKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLR-EVGMPADYVNKLARMFQD 478
Query: 410 MKTSQDTMHEFYASHP--ELG-DSRTLVVQVLTTGSWP-TQPSVTCNLPAEMSALCEKFR 465
+K S+D F H +L + ++ +++L G+W + V +LP E+ L +
Sbjct: 479 IKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVE 538
Query: 466 SYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADR 518
+Y H+GR+L W M + I GQ ++L V+T+Q+ VL +N R
Sbjct: 539 EFYKKNHSGRKLHWHHLMSNGIITFKNEVGQ-YDLEVTTFQLAVLFAWNQRPR 590
Score = 231 (86.4 bits), Expect = 7.6e-16, P = 7.6e-16
Identities = 59/246 (23%), Positives = 127/246 (51%)
Query: 75 VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDL--GPS 132
V +L L+ W ++I SN I+ RL ++ ++LVH ER GE + L+ + + ++L P
Sbjct: 114 VRKLMLDTWNESIF-SN-IKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPE 171
Query: 133 ----VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAK 188
+Y+++FEK +L+ + FY+ ++ +++ Y+K A+ +L EE +R YL+ +
Sbjct: 172 DKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETR 231
Query: 189 SEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIRE 248
E + + + + + M+ ++ E L M++L +VP+G+ + +
Sbjct: 232 RECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLK 291
Query: 249 VMTSHLRETG-KQLVTDPERLK-DPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSS 306
+ H+ G +V E + D ++V++LL +++ ++ AF +D F A + +
Sbjct: 292 DLEEHIISAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKA 351
Query: 307 FEYFIN 312
++ +N
Sbjct: 352 YKAVVN 357
>UNIPROTKB|F1P0F9 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031466 "Cul5-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031466 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 EMBL:AADN02005055 IPI:IPI00593656
Ensembl:ENSGALT00000027725 Uniprot:F1P0F9
Length = 776
Score = 270 (100.1 bits), Expect = 4.0e-20, P = 4.0e-20
Identities = 83/293 (28%), Positives = 148/293 (50%)
Query: 243 LLTIREVMTSHLRETGKQLVTDPER----LKDPVEFVQRLLDEKDK-YDNIISSAFNNDK 297
++ E +T+ + +QL+T R +K+ + R L +DK Y ++ ND
Sbjct: 322 MVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVV-----NDA 376
Query: 298 T-FQNALNSSFEYF-INLNPRS--PEFISLFVDDKLRKG--LKGVSEEDVETILDKVMML 351
T F+ L + + P S PE ++ + D LRK K ++ E++E L +V+++
Sbjct: 377 TIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLV 436
Query: 352 FRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGY--QFTSKLEGMFTD 409
+Y+Q KDVF +Y+K HL +RL+ + + E +++ L+ E G + +KL MF D
Sbjct: 437 LKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLR-EVGMPADYVNKLARMFQD 495
Query: 410 MKTSQDTMHEFYASHP--ELG-DSRTLVVQVLTTGSWP-TQPSVTCNLPAEMSALCEKFR 465
+K S+D F H +L + ++ +++L G+W + V +LP E+ L +
Sbjct: 496 IKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVE 555
Query: 466 SYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADR 518
+Y H+GR+L W M + I GQ ++L V+T+Q+ VL +N R
Sbjct: 556 EFYKKNHSGRKLHWHHLMSNGIITFKNEVGQ-YDLEVTTFQLAVLFAWNQRPR 607
Score = 231 (86.4 bits), Expect = 7.8e-16, P = 7.8e-16
Identities = 59/246 (23%), Positives = 127/246 (51%)
Query: 75 VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDL--GPS 132
V +L L+ W ++I SN I+ RL ++ ++LVH ER GE + L+ + + ++L P
Sbjct: 131 VRKLMLDTWNESIF-SN-IKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPE 188
Query: 133 ----VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAK 188
+Y+++FEK +L+ + FY+ ++ +++ Y+K A+ +L EE +R YL+ +
Sbjct: 189 DKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETR 248
Query: 189 SEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIRE 248
E + + + + + M+ ++ E L M++L +VP+G+ + +
Sbjct: 249 RECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLK 308
Query: 249 VMTSHLRETG-KQLVTDPERLK-DPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSS 306
+ H+ G +V E + D ++V++LL +++ ++ AF +D F A + +
Sbjct: 309 DLEEHIVSAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKA 368
Query: 307 FEYFIN 312
++ +N
Sbjct: 369 YKAVVN 374
>UNIPROTKB|Q93034 [details] [associations]
symbol:CUL5 "Cullin-5" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006970 "response to osmotic stress"
evidence=IEA] [GO:0051480 "cytosolic calcium ion homeostasis"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IDA] [GO:0031466 "Cul5-RING
ubiquitin ligase complex" evidence=IDA] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0004872
"receptor activity" evidence=TAS] [GO:0005262 "calcium channel
activity" evidence=TAS] [GO:0007050 "cell cycle arrest"
evidence=TAS] [GO:0008283 "cell proliferation" evidence=TAS]
[GO:0008285 "negative regulation of cell proliferation"
evidence=TAS] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0070588 "calcium ion
transmembrane transport" evidence=TAS] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005829
GO:GO:0005634 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0008285 GO:GO:0016032
EMBL:CH471065 GO:GO:0000082 GO:GO:0008283 GO:GO:0005262
GO:GO:0004872 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007050
GO:GO:0016567 GO:GO:0006970 GO:GO:0006511 GO:GO:0051480
GO:GO:0097193 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031466
GO:GO:0031625 InterPro:IPR016159 SUPFAM:SSF74788
HOGENOM:HOG000007610 KO:K10612 OMA:EVTTFQM EMBL:X81882
EMBL:AF017061 EMBL:AF327710 EMBL:AK292575 EMBL:BC063306
IPI:IPI00216003 RefSeq:NP_003469.2 UniGene:Hs.440320
UniGene:Hs.701122 PDB:3DPL PDB:3DQV PDBsum:3DPL PDBsum:3DQV
ProteinModelPortal:Q93034 SMR:Q93034 DIP:DIP-43696N IntAct:Q93034
MINT:MINT-1184052 STRING:Q93034 PhosphoSite:Q93034 DMDM:14917099
PaxDb:Q93034 PRIDE:Q93034 Ensembl:ENST00000393094
Ensembl:ENST00000531427 GeneID:8065 KEGG:hsa:8065 UCSC:uc001pjv.3
CTD:8065 GeneCards:GC11P107913 HGNC:HGNC:2556 HPA:CAB017787
HPA:HPA002185 MIM:601741 neXtProt:NX_Q93034 PharmGKB:PA27052
HOVERGEN:HBG099672 InParanoid:Q93034 OrthoDB:EOG46Q6RZ
PhylomeDB:Q93034 EvolutionaryTrace:Q93034 GenomeRNAi:8065
NextBio:30655 ArrayExpress:Q93034 Bgee:Q93034 CleanEx:HS_CUL5
Genevestigator:Q93034 GermOnline:ENSG00000166266 Uniprot:Q93034
Length = 780
Score = 270 (100.1 bits), Expect = 4.0e-20, P = 4.0e-20
Identities = 83/293 (28%), Positives = 148/293 (50%)
Query: 243 LLTIREVMTSHLRETGKQLVTDPER----LKDPVEFVQRLLDEKDK-YDNIISSAFNNDK 297
++ E +T+ + +QL+T R +K+ + R L +DK Y ++ ND
Sbjct: 326 MVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVV-----NDA 380
Query: 298 T-FQNALNSSFEYF-INLNPRS--PEFISLFVDDKLRKG--LKGVSEEDVETILDKVMML 351
T F+ L + + P S PE ++ + D LRK K ++ E++E L +V+++
Sbjct: 381 TIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLV 440
Query: 352 FRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGY--QFTSKLEGMFTD 409
+Y+Q KDVF +Y+K HL +RL+ + + E +++ L+ E G + +KL MF D
Sbjct: 441 LKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLR-EVGMPADYVNKLARMFQD 499
Query: 410 MKTSQDTMHEFYASHP--ELG-DSRTLVVQVLTTGSWP-TQPSVTCNLPAEMSALCEKFR 465
+K S+D F H +L + ++ +++L G+W + V +LP E+ L +
Sbjct: 500 IKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVE 559
Query: 466 SYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADR 518
+Y H+GR+L W M + I GQ ++L V+T+Q+ VL +N R
Sbjct: 560 EFYKKNHSGRKLHWHHLMSNGIITFKNEVGQ-YDLEVTTFQLAVLFAWNQRPR 611
Score = 231 (86.4 bits), Expect = 7.9e-16, P = 7.9e-16
Identities = 59/246 (23%), Positives = 127/246 (51%)
Query: 75 VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDL--GPS 132
V +L L+ W ++I SN I+ RL ++ ++LVH ER GE + L+ + + ++L P
Sbjct: 135 VRKLMLDTWNESIF-SN-IKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPE 192
Query: 133 ----VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAK 188
+Y+++FEK +L+ + FY+ ++ +++ Y+K A+ +L EE +R YL+ +
Sbjct: 193 DKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETR 252
Query: 189 SEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIRE 248
E + + + + + M+ ++ E L M++L +VP+G+ + +
Sbjct: 253 RECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLK 312
Query: 249 VMTSHLRETG-KQLVTDPERLK-DPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSS 306
+ H+ G +V E + D ++V++LL +++ ++ AF +D F A + +
Sbjct: 313 DLEEHIISAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKA 372
Query: 307 FEYFIN 312
++ +N
Sbjct: 373 YKAVVN 378
>UNIPROTKB|I3LFR2 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031466 "Cul5-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031466 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K10612 OMA:EVTTFQM CTD:8065
EMBL:FP340346 RefSeq:XP_003357323.1 ProteinModelPortal:I3LFR2
SMR:I3LFR2 PRIDE:I3LFR2 Ensembl:ENSSSCT00000029949 GeneID:100525708
KEGG:ssc:100525708 Uniprot:I3LFR2
Length = 780
Score = 270 (100.1 bits), Expect = 4.0e-20, P = 4.0e-20
Identities = 83/293 (28%), Positives = 148/293 (50%)
Query: 243 LLTIREVMTSHLRETGKQLVTDPER----LKDPVEFVQRLLDEKDK-YDNIISSAFNNDK 297
++ E +T+ + +QL+T R +K+ + R L +DK Y ++ ND
Sbjct: 326 MVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVV-----NDA 380
Query: 298 T-FQNALNSSFEYF-INLNPRS--PEFISLFVDDKLRKG--LKGVSEEDVETILDKVMML 351
T F+ L + + P S PE ++ + D LRK K ++ E++E L +V+++
Sbjct: 381 TIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLV 440
Query: 352 FRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGY--QFTSKLEGMFTD 409
+Y+Q KDVF +Y+K HL +RL+ + + E +++ L+ E G + +KL MF D
Sbjct: 441 LKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLR-EVGMPADYVNKLARMFQD 499
Query: 410 MKTSQDTMHEFYASHP--ELG-DSRTLVVQVLTTGSWP-TQPSVTCNLPAEMSALCEKFR 465
+K S+D F H +L + ++ +++L G+W + V +LP E+ L +
Sbjct: 500 IKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVE 559
Query: 466 SYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADR 518
+Y H+GR+L W M + I GQ ++L V+T+Q+ VL +N R
Sbjct: 560 EFYKKNHSGRKLHWHHLMSNGIITFKNEVGQ-YDLEVTTFQLAVLFAWNQRPR 611
Score = 231 (86.4 bits), Expect = 7.9e-16, P = 7.9e-16
Identities = 59/246 (23%), Positives = 127/246 (51%)
Query: 75 VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDL--GPS 132
V +L L+ W ++I SN I+ RL ++ ++LVH ER GE + L+ + + ++L P
Sbjct: 135 VRKLMLDTWNESIF-SN-IKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPE 192
Query: 133 ----VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAK 188
+Y+++FEK +L+ + FY+ ++ +++ Y+K A+ +L EE +R YL+ +
Sbjct: 193 DKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETR 252
Query: 189 SEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIRE 248
E + + + + + M+ ++ E L M++L +VP+G+ + +
Sbjct: 253 RECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLK 312
Query: 249 VMTSHLRETG-KQLVTDPERLK-DPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSS 306
+ H+ G +V E + D ++V++LL +++ ++ AF +D F A + +
Sbjct: 313 DLEEHIISAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKA 372
Query: 307 FEYFIN 312
++ +N
Sbjct: 373 YKAVVN 378
>MGI|MGI:1922967 [details] [associations]
symbol:Cul5 "cullin 5" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0031461 "cullin-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031466 "Cul5-RING
ubiquitin ligase complex" evidence=ISO] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] [GO:0051480 "cytosolic
calcium ion homeostasis" evidence=ISO] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 MGI:MGI:1922967
GO:GO:0005634 GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0006970 GO:GO:0006511 GO:GO:0051480
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031466 InterPro:IPR016159
SUPFAM:SSF74788 HOGENOM:HOG000007610 KO:K10612 CTD:8065
HOVERGEN:HBG099672 OrthoDB:EOG46Q6RZ EMBL:AK014894 EMBL:AK030306
EMBL:AK031955 EMBL:AK046030 EMBL:AK080305 EMBL:BC075710
IPI:IPI00988369 RefSeq:NP_001155090.1 RefSeq:NP_082083.2
UniGene:Mm.218910 UniGene:Mm.482399 PDB:2WZK PDBsum:2WZK
ProteinModelPortal:Q9D5V5 SMR:Q9D5V5 IntAct:Q9D5V5 STRING:Q9D5V5
PhosphoSite:Q9D5V5 PaxDb:Q9D5V5 PRIDE:Q9D5V5 GeneID:75717
KEGG:mmu:75717 InParanoid:Q9D5V5 EvolutionaryTrace:Q9D5V5
NextBio:343766 Bgee:Q9D5V5 CleanEx:MM_CUL5 Genevestigator:Q9D5V5
GermOnline:ENSMUSG00000032030 Uniprot:Q9D5V5
Length = 780
Score = 270 (100.1 bits), Expect = 4.0e-20, P = 4.0e-20
Identities = 83/293 (28%), Positives = 148/293 (50%)
Query: 243 LLTIREVMTSHLRETGKQLVTDPER----LKDPVEFVQRLLDEKDK-YDNIISSAFNNDK 297
++ E +T+ + +QL+T R +K+ + R L +DK Y ++ ND
Sbjct: 326 MVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVV-----NDA 380
Query: 298 T-FQNALNSSFEYF-INLNPRS--PEFISLFVDDKLRKG--LKGVSEEDVETILDKVMML 351
T F+ L + + P S PE ++ + D LRK K ++ E++E L +V+++
Sbjct: 381 TIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLV 440
Query: 352 FRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGY--QFTSKLEGMFTD 409
+Y+Q KDVF +Y+K HL +RL+ + + E +++ L+ E G + +KL MF D
Sbjct: 441 LKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLR-EVGMPADYVNKLARMFQD 499
Query: 410 MKTSQDTMHEFYASHP--ELG-DSRTLVVQVLTTGSWP-TQPSVTCNLPAEMSALCEKFR 465
+K S+D F H +L + ++ +++L G+W + V +LP E+ L +
Sbjct: 500 IKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVE 559
Query: 466 SYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADR 518
+Y H+GR+L W M + I GQ ++L V+T+Q+ VL +N R
Sbjct: 560 EFYKKNHSGRKLHWHHLMSNGIITFKNEVGQ-YDLEVTTFQLAVLFAWNQRPR 611
Score = 231 (86.4 bits), Expect = 7.9e-16, P = 7.9e-16
Identities = 59/246 (23%), Positives = 127/246 (51%)
Query: 75 VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDL--GPS 132
V +L L+ W ++I SN I+ RL ++ ++LVH ER GE + L+ + + ++L P
Sbjct: 135 VRKLMLDTWNESIF-SN-IKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPE 192
Query: 133 ----VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAK 188
+Y+++FEK +L+ + FY+ ++ +++ Y+K A+ +L EE +R YL+ +
Sbjct: 193 DKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETR 252
Query: 189 SEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIRE 248
E + + + + + M+ ++ E L M++L +VP+G+ + +
Sbjct: 253 RECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLK 312
Query: 249 VMTSHLRETG-KQLVTDPERLK-DPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSS 306
+ H+ G +V E + D ++V++LL +++ ++ AF +D F A + +
Sbjct: 313 DLEEHIISAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKA 372
Query: 307 FEYFIN 312
++ +N
Sbjct: 373 YKAVVN 378
>RGD|621742 [details] [associations]
symbol:Cul5 "cullin 5" species:10116 "Rattus norvegicus"
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=TAS] [GO:0005000
"vasopressin receptor activity" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0006970 "response to
osmotic stress" evidence=IEP] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031466 "Cul5-RING ubiquitin
ligase complex" evidence=ISO;TAS] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA;ISO] [GO:0051480 "cytosolic calcium
ion homeostasis" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 RGD:621742
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006970 GO:GO:0006511 GO:GO:0051480
GO:GO:0004842 GO:GO:0000209 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0005000 GO:GO:0031466 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 HOGENOM:HOG000007610 KO:K10612
OMA:EVTTFQM CTD:8065 HOVERGEN:HBG099672 OrthoDB:EOG46Q6RZ
EMBL:AF135115 IPI:IPI00325517 RefSeq:NP_073174.1 UniGene:Rn.163001
ProteinModelPortal:Q9JJ31 STRING:Q9JJ31 PhosphoSite:Q9JJ31
PRIDE:Q9JJ31 Ensembl:ENSRNOT00000010956 GeneID:64624 KEGG:rno:64624
UCSC:RGD:621742 InParanoid:Q9JJ31 NextBio:613566
ArrayExpress:Q9JJ31 Genevestigator:Q9JJ31
GermOnline:ENSRNOG00000008039 Uniprot:Q9JJ31
Length = 780
Score = 270 (100.1 bits), Expect = 4.0e-20, P = 4.0e-20
Identities = 83/293 (28%), Positives = 148/293 (50%)
Query: 243 LLTIREVMTSHLRETGKQLVTDPER----LKDPVEFVQRLLDEKDK-YDNIISSAFNNDK 297
++ E +T+ + +QL+T R +K+ + R L +DK Y ++ ND
Sbjct: 326 MVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVV-----NDA 380
Query: 298 T-FQNALNSSFEYF-INLNPRS--PEFISLFVDDKLRKG--LKGVSEEDVETILDKVMML 351
T F+ L + + P S PE ++ + D LRK K ++ E++E L +V+++
Sbjct: 381 TIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLV 440
Query: 352 FRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGY--QFTSKLEGMFTD 409
+Y+Q KDVF +Y+K HL +RL+ + + E +++ L+ E G + +KL MF D
Sbjct: 441 LKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLR-EVGMPADYVNKLARMFQD 499
Query: 410 MKTSQDTMHEFYASHP--ELG-DSRTLVVQVLTTGSWP-TQPSVTCNLPAEMSALCEKFR 465
+K S+D F H +L + ++ +++L G+W + V +LP E+ L +
Sbjct: 500 IKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVE 559
Query: 466 SYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADR 518
+Y H+GR+L W M + I GQ ++L V+T+Q+ VL +N R
Sbjct: 560 EFYKKNHSGRKLHWHHLMSNGIITFKNEVGQ-YDLEVTTFQLAVLFAWNQRPR 611
Score = 230 (86.0 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 59/246 (23%), Positives = 126/246 (51%)
Query: 75 VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDL--GPS 132
V +L L+ W ++I SN I+ RL ++ ++LVH ER GE + L+ + + ++L P
Sbjct: 135 VRKLMLDTWNESIF-SN-IKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPE 192
Query: 133 ----VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAK 188
+Y+++FEK +L+ + FY+ ++ +++ Y+K A+ +L EE +R YL+ +
Sbjct: 193 DKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETR 252
Query: 189 SEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIRE 248
E + + + + + M+ ++ E L M++L +VP G+ + +
Sbjct: 253 RECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPGGIEPMLK 312
Query: 249 VMTSHLRETG-KQLVTDPERLK-DPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSS 306
+ H+ G +V E + D ++V++LL +++ ++ AF +D F A + +
Sbjct: 313 DLEEHIISAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKA 372
Query: 307 FEYFIN 312
++ +N
Sbjct: 373 YKAVVN 378
>UNIPROTKB|Q9JJ31 [details] [associations]
symbol:Cul5 "Cullin-5" species:10116 "Rattus norvegicus"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 RGD:621742 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006970
GO:GO:0006511 GO:GO:0051480 GO:GO:0004842 GO:GO:0000209
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0005000 GO:GO:0031466
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000007610 KO:K10612 OMA:EVTTFQM CTD:8065
HOVERGEN:HBG099672 OrthoDB:EOG46Q6RZ EMBL:AF135115 IPI:IPI00325517
RefSeq:NP_073174.1 UniGene:Rn.163001 ProteinModelPortal:Q9JJ31
STRING:Q9JJ31 PhosphoSite:Q9JJ31 PRIDE:Q9JJ31
Ensembl:ENSRNOT00000010956 GeneID:64624 KEGG:rno:64624
UCSC:RGD:621742 InParanoid:Q9JJ31 NextBio:613566
ArrayExpress:Q9JJ31 Genevestigator:Q9JJ31
GermOnline:ENSRNOG00000008039 Uniprot:Q9JJ31
Length = 780
Score = 270 (100.1 bits), Expect = 4.0e-20, P = 4.0e-20
Identities = 83/293 (28%), Positives = 148/293 (50%)
Query: 243 LLTIREVMTSHLRETGKQLVTDPER----LKDPVEFVQRLLDEKDK-YDNIISSAFNNDK 297
++ E +T+ + +QL+T R +K+ + R L +DK Y ++ ND
Sbjct: 326 MVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVV-----NDA 380
Query: 298 T-FQNALNSSFEYF-INLNPRS--PEFISLFVDDKLRKG--LKGVSEEDVETILDKVMML 351
T F+ L + + P S PE ++ + D LRK K ++ E++E L +V+++
Sbjct: 381 TIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLV 440
Query: 352 FRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGY--QFTSKLEGMFTD 409
+Y+Q KDVF +Y+K HL +RL+ + + E +++ L+ E G + +KL MF D
Sbjct: 441 LKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLR-EVGMPADYVNKLARMFQD 499
Query: 410 MKTSQDTMHEFYASHP--ELG-DSRTLVVQVLTTGSWP-TQPSVTCNLPAEMSALCEKFR 465
+K S+D F H +L + ++ +++L G+W + V +LP E+ L +
Sbjct: 500 IKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVE 559
Query: 466 SYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADR 518
+Y H+GR+L W M + I GQ ++L V+T+Q+ VL +N R
Sbjct: 560 EFYKKNHSGRKLHWHHLMSNGIITFKNEVGQ-YDLEVTTFQLAVLFAWNQRPR 611
Score = 230 (86.0 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 59/246 (23%), Positives = 126/246 (51%)
Query: 75 VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDL--GPS 132
V +L L+ W ++I SN I+ RL ++ ++LVH ER GE + L+ + + ++L P
Sbjct: 135 VRKLMLDTWNESIF-SN-IKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPE 192
Query: 133 ----VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAK 188
+Y+++FEK +L+ + FY+ ++ +++ Y+K A+ +L EE +R YL+ +
Sbjct: 193 DKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETR 252
Query: 189 SEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIRE 248
E + + + + + M+ ++ E L M++L +VP G+ + +
Sbjct: 253 RECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPGGIEPMLK 312
Query: 249 VMTSHLRETG-KQLVTDPERLK-DPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSS 306
+ H+ G +V E + D ++V++LL +++ ++ AF +D F A + +
Sbjct: 313 DLEEHIISAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKA 372
Query: 307 FEYFIN 312
++ +N
Sbjct: 373 YKAVVN 378
>RGD|1563853 [details] [associations]
symbol:Cul4a "cullin 4A" species:10116 "Rattus norvegicus"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=ISO] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin ligase complex"
evidence=ISO] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=ISO] [GO:0051246 "regulation of
protein metabolic process" evidence=ISO] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISO] InterPro:IPR001373
Pfam:PF00888 RGD:1563853 GO:GO:0006511 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 IPI:IPI00952377
Ensembl:ENSRNOT00000066778 UCSC:RGD:1563853 ArrayExpress:D3ZL69
Uniprot:D3ZL69
Length = 255
Score = 243 (90.6 bits), Expect = 8.5e-20, P = 8.5e-20
Identities = 45/124 (36%), Positives = 81/124 (65%)
Query: 37 FLEELNRKWNDHNKALQMIRDILMYMDRTYIPSTHKTP-VHELGLNLWRDNIVRSNKIQT 95
FL+++N W DH + + MIR I +++DRTY+ P + ++GL L+R++I+ +Q+
Sbjct: 131 FLQKINTCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRNHIISDRMVQS 190
Query: 96 RLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLGPSVYQEDFEKPFLEVSAEFYKVESQ 155
+ ++ +L L+ RER+GE ++R L+R+++ ML DL VY++ FE FLE + Y E Q
Sbjct: 191 KTIDGILLLIGRERSGEAVDRSLLRSLLSMLSDL--QVYKDSFELKFLEETNCLYAAEGQ 248
Query: 156 KFIE 159
+ ++
Sbjct: 249 RLMQ 252
>GENEDB_PFALCIPARUM|PFF1445c [details] [associations]
symbol:PFF1445c "cullin-like protein, putative"
species:5833 "Plasmodium falciparum" [GO:0000082 "G1/S transition
of mitotic cell cycle" evidence=IMP] [GO:0051726 "regulation of
cell cycle" evidence=ISS] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 GO:GO:0000082 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0051726 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 EMBL:AL844505
RefSeq:XP_966280.1 ProteinModelPortal:C6KTD3 PRIDE:C6KTD3
EnsemblProtists:PFF1445c:mRNA GeneID:3885751 KEGG:pfa:PFF1445c
EuPathDB:PlasmoDB:PF3D7_0629800 HOGENOM:HOG000281645
ProtClustDB:CLSZ2432214 Uniprot:C6KTD3
Length = 1129
Score = 234 (87.4 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 97/429 (22%), Positives = 188/429 (43%)
Query: 86 NIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNI-IKMLMD---LGPSVYQEDFEKP 141
N+V + I T L+N +++++ ++N +++ I K+ +D + Y F K
Sbjct: 454 NVV--DNIGTELVN---DVINKRNNSSLLNNAIIKLINFKLNVDRIIIMSFRYSSYFMKK 508
Query: 142 FLEVSAEFYK--VESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAKITNVVEK 199
+ EV F ++++ ++ YL N + ++ Y KI N
Sbjct: 509 WREVFEHFINKGIQAETYMPII-LSMYLNNLLTMYNACLRKLKKYYILNK--KIKN---N 562
Query: 200 EMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREVMTSHLRETGK 259
+ N++ L +D + + + + Y++ +L I++ + + T K
Sbjct: 563 RSLFNNL--LFEVDWNNYCTQPISETID----FYDISTD-SDNMLGIKKYLRKKRKNTKK 615
Query: 260 QLVT-DPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEY-FINLNPRS 317
L+ + E + + + D DNI FNN+ F N +++ Y +N+N RS
Sbjct: 616 DLINFEHEEEYVKRKHMDNNIHNNDHNDNIY---FNNNLYFNNDYHNNLYYDSLNINKRS 672
Query: 318 PE--FISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLS 375
E F L DKL K + + + ++ ++ LFRY+ +K+ FEKYY+ ++ KRL++
Sbjct: 673 DEKIFFHLLKIDKLFKKYHIIGKY-IMNMITVILSLFRYVSDKEKFEKYYRTYMCKRLIN 731
Query: 376 GKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEFYASHPELGDS----R 431
+ + + + LK ECG QFT K+E + DMK + T+ +FY P + +
Sbjct: 732 DSSFNIILDVKVFKTLKKECGAQFTKKIEIILKDMKFTSKTLMKFYKELPNNVNHFLKRK 791
Query: 432 TLVVQVLTTGSWPTQPSVTCNLPAEMSALC-EKFRSYYLGTHTGRRLSWQTNMGSADIKA 490
V ++ SW + + M +C E F +Y + + + + +G ++
Sbjct: 792 KYAVNIIFNESWEYVNTENNVIYPPMIKMCNEAFFLFYQKYNKSKNIKFLPLLGLCTLRV 851
Query: 491 TFGKGQKHE 499
F K K E
Sbjct: 852 HF-KNFKEE 859
Score = 46 (21.3 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 482 NMGSADIKATFGK-GQKH-ELNVSTYQMCVLMLFN 514
++ + D +T+ K G+K + V+ Q VL+LFN
Sbjct: 944 DLNNEDSSSTYNKKGKKKIYITVTILQALVLLLFN 978
>UNIPROTKB|C6KTD3 [details] [associations]
symbol:PFF1445c "Cullin-like protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IMP] [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR001373
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0000082
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0051726 GO:GO:0006511
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
EMBL:AL844505 RefSeq:XP_966280.1 ProteinModelPortal:C6KTD3
PRIDE:C6KTD3 EnsemblProtists:PFF1445c:mRNA GeneID:3885751
KEGG:pfa:PFF1445c EuPathDB:PlasmoDB:PF3D7_0629800
HOGENOM:HOG000281645 ProtClustDB:CLSZ2432214 Uniprot:C6KTD3
Length = 1129
Score = 234 (87.4 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 97/429 (22%), Positives = 188/429 (43%)
Query: 86 NIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNI-IKMLMD---LGPSVYQEDFEKP 141
N+V + I T L+N +++++ ++N +++ I K+ +D + Y F K
Sbjct: 454 NVV--DNIGTELVN---DVINKRNNSSLLNNAIIKLINFKLNVDRIIIMSFRYSSYFMKK 508
Query: 142 FLEVSAEFYK--VESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAKITNVVEK 199
+ EV F ++++ ++ YL N + ++ Y KI N
Sbjct: 509 WREVFEHFINKGIQAETYMPII-LSMYLNNLLTMYNACLRKLKKYYILNK--KIKN---N 562
Query: 200 EMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREVMTSHLRETGK 259
+ N++ L +D + + + + Y++ +L I++ + + T K
Sbjct: 563 RSLFNNL--LFEVDWNNYCTQPISETID----FYDISTD-SDNMLGIKKYLRKKRKNTKK 615
Query: 260 QLVT-DPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEY-FINLNPRS 317
L+ + E + + + D DNI FNN+ F N +++ Y +N+N RS
Sbjct: 616 DLINFEHEEEYVKRKHMDNNIHNNDHNDNIY---FNNNLYFNNDYHNNLYYDSLNINKRS 672
Query: 318 PE--FISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLS 375
E F L DKL K + + + ++ ++ LFRY+ +K+ FEKYY+ ++ KRL++
Sbjct: 673 DEKIFFHLLKIDKLFKKYHIIGKY-IMNMITVILSLFRYVSDKEKFEKYYRTYMCKRLIN 731
Query: 376 GKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEFYASHPELGDS----R 431
+ + + + LK ECG QFT K+E + DMK + T+ +FY P + +
Sbjct: 732 DSSFNIILDVKVFKTLKKECGAQFTKKIEIILKDMKFTSKTLMKFYKELPNNVNHFLKRK 791
Query: 432 TLVVQVLTTGSWPTQPSVTCNLPAEMSALC-EKFRSYYLGTHTGRRLSWQTNMGSADIKA 490
V ++ SW + + M +C E F +Y + + + + +G ++
Sbjct: 792 KYAVNIIFNESWEYVNTENNVIYPPMIKMCNEAFFLFYQKYNKSKNIKFLPLLGLCTLRV 851
Query: 491 TFGKGQKHE 499
F K K E
Sbjct: 852 HF-KNFKEE 859
Score = 46 (21.3 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 482 NMGSADIKATFGK-GQKH-ELNVSTYQMCVLMLFN 514
++ + D +T+ K G+K + V+ Q VL+LFN
Sbjct: 944 DLNNEDSSSTYNKKGKKKIYITVTILQALVLLLFN 978
>TAIR|locus:2118111 [details] [associations]
symbol:AT4G12100 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006511 GO:GO:0031461
EMBL:AL049638 EMBL:AL161533 InterPro:IPR016159 SUPFAM:SSF74788
KO:K10609 EMBL:AY133688 IPI:IPI00544547 PIR:T06617
RefSeq:NP_192947.1 UniGene:At.33506 ProteinModelPortal:Q9SZ75
SMR:Q9SZ75 PaxDb:Q9SZ75 PRIDE:Q9SZ75 EnsemblPlants:AT4G12100.1
GeneID:826818 KEGG:ath:AT4G12100 TAIR:At4g12100 eggNOG:NOG327349
HOGENOM:HOG000153571 OMA:HECEPHI PhylomeDB:Q9SZ75
ProtClustDB:CLSN2915908 Genevestigator:Q9SZ75 Uniprot:Q9SZ75
Length = 434
Score = 206 (77.6 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 59/231 (25%), Positives = 117/231 (50%)
Query: 21 HLKEISKSIEAAQGGS-----FLEELNRKWNDHNKALQMIRDILMYMDRTYIPSTHKTPV 75
H+ E+ +S+E GS FL + +W D + + ++ D+ MY + + +
Sbjct: 138 HIAELIQSLEKNCSGSDDPSVFLPHVYNRWLDFKRKMSLVSDVAMYQ------TLNGLTL 191
Query: 76 HELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLGPSVYQ 135
++G L+ + + ++Q +++ +L L+ ER G+ N +++K LMD+ +Q
Sbjct: 192 WDVGQKLFHKQLSMAPQLQDQVITGILRLITDERLGKAANN--TSDLLKNLMDMFRMQWQ 249
Query: 136 EDF--EKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVT-HYLD-AKSEA 191
+ + PFL+ +++FY E+++ ++ D YLK ER E E+ HY + S +
Sbjct: 250 CTYVYKDPFLDSTSKFYAEEAEQVLQRSDISHYLKYVERTFLAEEEKCDKHYFFFSSSRS 309
Query: 192 KITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKY-EDLGRMYNLFRRVPS 241
++ V++ +++ H L G + +L+D+ +DL RMY LF V S
Sbjct: 310 RLMKVLKSQLLEAHSSFL----EEGFM-LLMDESLIDDLRRMYRLFSMVDS 355
>UNIPROTKB|F1SR60 [details] [associations]
symbol:F1SR60 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00884 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
GeneTree:ENSGT00550000074299 Ensembl:ENSSSCT00000017678 OMA:FNHRARI
Uniprot:F1SR60
Length = 308
Score = 159 (61.0 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 34/69 (49%), Positives = 45/69 (65%)
Query: 433 LVVQVLTTGSWPTQPSVT-CNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKAT 491
L V+VLTTG WPTQ + CN+P E FR +YL H+GR+L+ Q +MGSAD+ AT
Sbjct: 43 LTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNAT 102
Query: 492 F-GKGQKHE 499
F G +K +
Sbjct: 103 FYGPVKKED 111
>TAIR|locus:2102772 [details] [associations]
symbol:AT3G46910 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006511 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 EMBL:AL096859 IPI:IPI00518982
PIR:T12957 RefSeq:NP_190275.1 UniGene:At.53807
ProteinModelPortal:Q9STG3 SMR:Q9STG3 PaxDb:Q9STG3 PRIDE:Q9STG3
DNASU:823844 EnsemblPlants:AT3G46910.1 GeneID:823844
KEGG:ath:AT3G46910 TAIR:At3g46910 eggNOG:NOG292258 KO:K10609
OMA:MENCCLE PhylomeDB:Q9STG3 Genevestigator:Q9STG3 Uniprot:Q9STG3
Length = 247
Score = 149 (57.5 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 47/182 (25%), Positives = 88/182 (48%)
Query: 7 GEKLYSGLVSTMTLHLKEISKSIEA---AQGGSFLEELNRKWNDHNKALQMIRDILMYMD 63
GE LY ++ +++ +S+E+ FL L + W D + LQ + I
Sbjct: 67 GEALYKLILEECEIYISAAIQSLESQCDTDPSLFLSLLEKCWLDFRRKLQFLCSIAGGEG 126
Query: 64 RTYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNII 123
+T P H V +LG L ++ + K++ +LL+ +L+L+ +R+ ++ ++N
Sbjct: 127 QTVGP--HS--VWDLGSELSPKHLFSAQKVRDKLLSIILQLIRDQRSFMSVDMTQLKNTT 182
Query: 124 KMLMDL-------------GPSVYQEDF-EKPFLEVSAEFYKVESQKFIECCDCGEYLKK 169
+ +M + G S+Y+ F +KPF++ + EFY E+ +F E D YLK+
Sbjct: 183 RPVMSVHMTQLNNLRGLFYGQSLYKSPFFKKPFIDCAVEFYSAEAMQFKEQSDIPLYLKR 242
Query: 170 AE 171
E
Sbjct: 243 VE 244
>UNIPROTKB|H0YCA0 [details] [associations]
symbol:CUL5 "Cullin-5" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 Pfam:PF00888 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 HGNC:HGNC:2556
EMBL:AP002433 EMBL:AP003307 Ensembl:ENST00000532782 Uniprot:H0YCA0
Length = 130
Score = 115 (45.5 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 28/97 (28%), Positives = 56/97 (57%)
Query: 78 LGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDL--GPS--- 132
L L+ W ++I SN I+ RL ++ ++LVH ER GE + L+ + + ++L P
Sbjct: 35 LMLDTWNESIF-SN-IKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPEDKL 92
Query: 133 -VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLK 168
+Y+++FEK +L+ + FY+ ++ +++ Y+K
Sbjct: 93 QIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMK 129
>UNIPROTKB|E2RQI6 [details] [associations]
symbol:CACUL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045860 "positive regulation of protein
kinase activity" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] InterPro:IPR001373
Pfam:PF00888 GO:GO:0000082 GO:GO:0008284 GO:GO:0045860
GO:GO:0006511 GO:GO:0031461 OMA:VMNVITI InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00390000000403 EMBL:AAEX03015571
EMBL:AAEX03015572 Ensembl:ENSCAFT00000019069 NextBio:20853255
Uniprot:E2RQI6
Length = 257
Score = 124 (48.7 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 36/134 (26%), Positives = 67/134 (50%)
Query: 2 VLHKFGEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMY 61
V + E++YS L+ +T HL+ +SK ++A+ ++E N + ALQ I + +Y
Sbjct: 59 VCQQHSEQMYSDLIKKITNHLERVSKELQASPPDLYIERFNIALGQYMGALQSIVPLFIY 118
Query: 62 MDRTYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRN 121
M++ YI + + + + L+ +++ + I + L+ LLE + T + M N
Sbjct: 119 MNKFYIETKLNRDLKDDLIKLFTEHVAEKH-IYS-LMPLLLEA---QSTPFQVTPSTMAN 173
Query: 122 IIKMLMDLGPSVYQ 135
I+K L L P Q
Sbjct: 174 IVKGLYTLRPEWVQ 187
>UNIPROTKB|Q5ZMM9 [details] [associations]
symbol:C6H10orf46 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0045860 "positive regulation of protein kinase
activity" evidence=IEA] InterPro:IPR001373 Pfam:PF00888
GO:GO:0000082 GO:GO:0008284 GO:GO:0045860 GO:GO:0006511
GO:GO:0031461 eggNOG:NOG302356 HOGENOM:HOG000111684
HOVERGEN:HBG059519 OMA:VMNVITI InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00390000000403 OrthoDB:EOG4VDQ00 EMBL:AADN02030972
EMBL:AADN02030973 EMBL:AJ719355 IPI:IPI00651391
RefSeq:NP_001026409.1 UniGene:Gga.13191 Ensembl:ENSGALT00000015155
GeneID:423926 KEGG:gga:423926 CTD:423926 InParanoid:Q5ZMM9
NextBio:20826322 Uniprot:Q5ZMM9
Length = 347
Score = 126 (49.4 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 34/134 (25%), Positives = 65/134 (48%)
Query: 2 VLHKFGEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMY 61
V + E++YS L+ +T HL+ +SK ++A+ ++E N + ALQ I + +Y
Sbjct: 149 VCQQHSEQMYSDLIKKITNHLERVSKELQASPPDLYIERFNVALGQYMGALQSIVPLFIY 208
Query: 62 MDRTYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRN 121
M++ YI + + + + L+ +++ + + N + L+ + T I M N
Sbjct: 209 MNKFYIETKLNRDLKDDLIKLFTEHVAEKH-----IYNLMPLLLEAQSTPFQITPSTMAN 263
Query: 122 IIKMLMDLGPSVYQ 135
I+K L L P Q
Sbjct: 264 IVKGLYTLRPEWVQ 277
>UNIPROTKB|Q86Y37 [details] [associations]
symbol:CACUL1 "CDK2-associated and cullin domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IPI] [GO:0000082
"G1/S transition of mitotic cell cycle" evidence=IMP] [GO:0008284
"positive regulation of cell proliferation" evidence=IMP]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=IMP] InterPro:IPR001373 Pfam:PF00888 PROSITE:PS01256
PROSITE:PS50069 GO:GO:0000082 GO:GO:0008284 GO:GO:0045860
GO:GO:0006511 GO:GO:0031461 EMBL:AJ544771 EMBL:AY743663
EMBL:AK097728 EMBL:AL139407 EMBL:BC038294 IPI:IPI00410319
IPI:IPI00604719 IPI:IPI00604792 RefSeq:NP_722517.3
UniGene:Hs.420024 ProteinModelPortal:Q86Y37 PhosphoSite:Q86Y37
DMDM:67460542 PRIDE:Q86Y37 Ensembl:ENST00000340214
Ensembl:ENST00000369151 Ensembl:ENST00000369156
Ensembl:ENST00000493518 GeneID:143384 KEGG:hsa:143384
UCSC:uc001lds.1 CTD:143384 GeneCards:GC10M120433 HGNC:HGNC:23727
neXtProt:NX_Q86Y37 PharmGKB:PA134869023 eggNOG:NOG302356
HOGENOM:HOG000111684 HOVERGEN:HBG059519 InParanoid:Q86Y37
OMA:VMNVITI GenomeRNAi:143384 NextBio:84703 ArrayExpress:Q86Y37
Bgee:Q86Y37 CleanEx:HS_C10orf46 Genevestigator:Q86Y37
GermOnline:ENSG00000151893 InterPro:IPR016159 SUPFAM:SSF74788
Uniprot:Q86Y37
Length = 369
Score = 126 (49.4 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 44/166 (26%), Positives = 77/166 (46%)
Query: 2 VLHKFGEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMY 61
V + E++YS L+ +T HL+ +SK ++A+ ++E N + ALQ I + +Y
Sbjct: 171 VCQQHSEQMYSDLIKKITNHLERVSKELQASPPDLYIERFNIALGQYMGALQSIVPLFIY 230
Query: 62 MDRTYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRN 121
M++ YI + + + + L+ +++ + I + L+ LLE + T + M N
Sbjct: 231 MNKFYIETKLNRDLKDDLIKLFTEHVAEKH-IYS-LMPLLLEA---QSTPFQVTPSTMAN 285
Query: 122 IIKMLMDLGPSVYQED---FEK-------PFLEVSAEFYKVESQKF 157
I+K L L P Q F K P +E Y + QKF
Sbjct: 286 IVKGLYTLRPEWVQMAPTLFSKFIPNILPPAVESELSEYAAQDQKF 331
>MGI|MGI:1926082 [details] [associations]
symbol:Cacul1 "CDK2 associated, cullin domain 1"
species:10090 "Mus musculus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISO] [GO:0019901 "protein kinase binding" evidence=ISO]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISO] InterPro:IPR001373 Pfam:PF00888 PROSITE:PS01256
PROSITE:PS50069 MGI:MGI:1926082 GO:GO:0000082 GO:GO:0008284
GO:GO:0045860 GO:GO:0006511 GO:GO:0031461 CTD:143384
eggNOG:NOG302356 HOGENOM:HOG000111684 HOVERGEN:HBG059519
OMA:VMNVITI InterPro:IPR016159 SUPFAM:SSF74788 EMBL:AK019216
EMBL:AK147382 EMBL:AK169791 EMBL:BC026363 IPI:IPI00283079
IPI:IPI00468580 RefSeq:NP_001165567.1 RefSeq:NP_001165568.1
RefSeq:NP_084473.1 UniGene:Mm.259026 UniGene:Mm.447781
ProteinModelPortal:Q8R0X2 PhosphoSite:Q8R0X2 PRIDE:Q8R0X2
Ensembl:ENSMUST00000081790 Ensembl:ENSMUST00000111460 GeneID:78832
KEGG:mmu:78832 UCSC:uc008ibv.2 UCSC:uc012boe.1
GeneTree:ENSGT00390000000403 InParanoid:Q8R0X2 OrthoDB:EOG4VDQ00
NextBio:349612 Bgee:Q8R0X2 CleanEx:MM_2700078E11RIK
Genevestigator:Q8R0X2 GermOnline:ENSMUSG00000033417 Uniprot:Q8R0X2
Length = 377
Score = 125 (49.1 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 36/134 (26%), Positives = 67/134 (50%)
Query: 2 VLHKFGEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMY 61
V + E++YS L+ +T HL+ +SK ++A+ ++E N + ALQ I + +Y
Sbjct: 179 VCQQHSEQMYSDLIKKITSHLERVSKELQASPPDLYIERFNIALGQYMGALQSIVPLFIY 238
Query: 62 MDRTYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRN 121
M++ YI + + + + L+ +++ + I + L+ LLE + T + M N
Sbjct: 239 MNKFYIETKLNRDLKDDLIKLFTEHVAEKH-IYS-LMPLLLEA---QSTPFQVTPSTMAN 293
Query: 122 IIKMLMDLGPSVYQ 135
I+K L L P Q
Sbjct: 294 IVKGLYTLRPEWVQ 307
>UNIPROTKB|F1MUK4 [details] [associations]
symbol:F1MUK4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045860 "positive regulation of protein kinase
activity" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] InterPro:IPR001373
Pfam:PF00888 GO:GO:0000082 GO:GO:0008284 GO:GO:0045860
GO:GO:0006511 GO:GO:0031461 OMA:VMNVITI InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00390000000403 EMBL:DAAA02059379
EMBL:DAAA02059380 EMBL:DAAA02059381 EMBL:DAAA02059382
IPI:IPI00687639 Ensembl:ENSBTAT00000030962 Uniprot:F1MUK4
Length = 375
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 36/134 (26%), Positives = 67/134 (50%)
Query: 2 VLHKFGEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMY 61
V + E++YS L+ +T HL+ +SK ++A+ ++E N + ALQ I + +Y
Sbjct: 177 VCQQHSEQMYSDLIKKITNHLERVSKELQASPPDLYIERFNIALGQYMGALQSIVPLFIY 236
Query: 62 MDRTYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRN 121
M++ YI + + + + L+ +++ + I + L+ LLE + T + M N
Sbjct: 237 MNKFYIETKLNRDLKDDLIKLFTEHVAEKH-IYS-LMPLLLEA---QSTPFQVTPSTMAN 291
Query: 122 IIKMLMDLGPSVYQ 135
I+K L L P Q
Sbjct: 292 IVKGLYTLRPEWVQ 305
>TAIR|locus:2049173 [details] [associations]
symbol:APC2 "AT2G04660" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA;TAS] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005819 "spindle"
evidence=IDA] [GO:0009561 "megagametogenesis" evidence=IMP]
[GO:0007267 "cell-cell signaling" evidence=RCA] [GO:0007276 "gamete
generation" evidence=RCA] [GO:0009616 "virus induced gene
silencing" evidence=RCA] [GO:0010267 "production of ta-siRNAs
involved in RNA interference" evidence=RCA] [GO:0032875 "regulation
of DNA endoreduplication" evidence=RCA] [GO:0035196 "production of
miRNAs involved in gene silencing by miRNA" evidence=RCA]
[GO:0051302 "regulation of cell division" evidence=RCA] [GO:0051510
"regulation of unidimensional cell growth" evidence=RCA]
InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888 PROSITE:PS01256
PROSITE:PS50069 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0051301 GO:GO:0007067 GO:GO:0005819
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511
GO:GO:0009561 eggNOG:COG5647 KO:K03349 InterPro:IPR014786
Pfam:PF08672 SMART:SM01013 SUPFAM:SSF75632 EMBL:AC006955
EMBL:AK118453 EMBL:AY138228 IPI:IPI00520644 PIR:H84459
RefSeq:NP_178543.2 UniGene:At.41283 ProteinModelPortal:Q8H1U5
SMR:Q8H1U5 IntAct:Q8H1U5 STRING:Q8H1U5 PaxDb:Q8H1U5 PRIDE:Q8H1U5
EnsemblPlants:AT2G04660.1 GeneID:815008 KEGG:ath:AT2G04660
TAIR:At2g04660 HOGENOM:HOG000265303 InParanoid:Q8H1U5 OMA:RIHNTLK
PhylomeDB:Q8H1U5 ProtClustDB:CLSN2690638 Genevestigator:Q8H1U5
GO:GO:0031461 Uniprot:Q8H1U5
Length = 865
Score = 126 (49.4 bits), Expect = 0.00026, P = 0.00026
Identities = 51/199 (25%), Positives = 86/199 (43%)
Query: 333 LKG-VSEEDVETILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSD-DAERSLIVK 390
LKG +S+ V+ IL ML + K+ Y+ LA++LL+ KT D D E +
Sbjct: 528 LKGSLSQRKVD-ILG---MLVDIIGSKEQLVNEYRVMLAEKLLN-KTDYDIDTEIRTVEL 582
Query: 391 LKTECGYQFTSKLEGMFTDM---KTSQDTMHEFYASHPELGDSR----TLVVQVLTTGSW 443
LK G + E M D+ K + + + EL ++ TL +L+T W
Sbjct: 583 LKIHFGEASMQRCEIMLNDLIDSKRVNTNIKKASQTGAELRENELSVDTLTSTILSTNFW 642
Query: 444 PTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVS 503
P LP + L + + Y T R+L W+ N+G+ ++ F + + + VS
Sbjct: 643 PPIQDEPLELPGPVDKLLSDYANRYHEIKTPRKLLWKKNLGTVKLELQF-EDRAMQFTVS 701
Query: 504 TYQMCVLMLFNNADRLSYQ 522
++M F +Y+
Sbjct: 702 PTHAAIIMQFQEKKSWTYK 720
>WB|WBGene00012198 [details] [associations]
symbol:W02B8.2 species:6239 "Caenorhabditis elegans"
[GO:0005083 "small GTPase regulator activity" evidence=IEA]
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR001180 InterPro:IPR001849 InterPro:IPR002219
Pfam:PF00780 PROSITE:PS50003 PROSITE:PS50081 PROSITE:PS50219
SMART:SM00036 SMART:SM00109 SMART:SM00233 GO:GO:0009792
GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0035556
GO:GO:0046872 GO:GO:0005622 eggNOG:NOG12793 GO:GO:0005083
GeneTree:ENSGT00700000105029 HOGENOM:HOG000017587 EMBL:Z81136
PIR:T26101 RefSeq:NP_496914.1 ProteinModelPortal:Q9XVH4 SMR:Q9XVH4
STRING:Q9XVH4 EnsemblMetazoa:W02B8.2 GeneID:175043
KEGG:cel:CELE_W02B8.2 UCSC:W02B8.2 CTD:175043 WormBase:W02B8.2
InParanoid:Q9XVH4 OMA:HAITANE NextBio:886530 Uniprot:Q9XVH4
Length = 1256
Score = 125 (49.1 bits), Expect = 0.00051, P = 0.00051
Identities = 104/439 (23%), Positives = 185/439 (42%)
Query: 26 SKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPSTHKTPVHELGLNLWRD 85
SKS + ++ N D L +I+ + R+ + H++ V + GLN
Sbjct: 17 SKSARYSSPYQVIDLNNESQEDLKTRLLEAENIIQDL-RSERDALHESLVDKAGLN--ES 73
Query: 86 NIV-RSNKI---QTRLLN---TLLE--LVHRERTGEVI-NRGLMRNIIKMLMDLGPSVYQ 135
I+ RSNK+ +TR+ TLLE L +E ++ NR L K M S YQ
Sbjct: 74 VIIERSNKVSTQETRIYRRDVTLLEDDLKQKESQIRILQNRCLRLETEKQKMQDTISGYQ 133
Query: 136 EDFEKPFLEV---SAEFYKVE---SQKFIECCDCGEYLKKAERRLNEEMERV-THYLDAK 188
ED ++ + + ++ +K+E S K E GE LK +LNE+ + T +
Sbjct: 134 EDLKENEIRIENLNSRLHKLEDELSAKTHEIFSIGEELKNKTMKLNEKNSQFQTKLAEIS 193
Query: 189 SEAK-ITNVVEK---EMIANHMPRL-VHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGL 243
SE + + V+K E+I L VH D +L + K L + +
Sbjct: 194 SENRNLERKVQKFREELIVKDQRSLEVHQDQENTQKVLKEVK--QLSDRLDYLTPKRKDV 251
Query: 244 LTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNN-DKTFQNA 302
I+E L+ + K + LK ++R L EK++ + KT A
Sbjct: 252 SRIKE-RDDFLQFSAKIIEETMSELKLKNARLERELSEKEELVKVTKEELQELQKTVTQA 310
Query: 303 LNSSFEYFINLNPRSPEFISLFVD---DKL--RKGLKGVSE--EDVETILDKVMMLFRYL 355
+ S + L+ + + D D L R+ LKG E E++E D+ + R +
Sbjct: 311 MGDSEQATKYLHAENMKLTRQKADIRCDLLEARRNLKGFDEKREELEKQRDEALEDVRRI 370
Query: 356 QEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTE-CGYQFTSK-LEGMFTDMKTS 413
E K+++ L S K ++++ E I +LK+ GY+ + E + ++ +
Sbjct: 371 TE-------LKKNVEIELRSLKLLAEEREEQ-IDELKSRVAGYEVLRRDHEAVKNELAKA 422
Query: 414 QDTMHEFYASHPELGDSRT 432
++ +++ A H + D ++
Sbjct: 423 EEKLNKMGA-HLVMADKQS 440
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 557 545 0.00095 119 3 11 22 0.39 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 119
No. of states in DFA: 615 (65 KB)
Total size of DFA: 309 KB (2160 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 54.99u 0.13s 55.12t Elapsed: 00:00:02
Total cpu time: 55.05u 0.13s 55.18t Elapsed: 00:00:02
Start: Tue May 21 11:01:09 2013 End: Tue May 21 11:01:11 2013
WARNINGS ISSUED: 1