BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008671
(557 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|297734578|emb|CBI16629.3| unnamed protein product [Vitis vinifera]
Length = 878
Score = 723 bits (1867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/551 (66%), Positives = 454/551 (82%), Gaps = 3/551 (0%)
Query: 1 MGSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVE 60
MGSTGEPDRKRRHFSS+SPTAATAKK PF P SE+KK+DTAVLQ+QNQKL QKLE QKVE
Sbjct: 1 MGSTGEPDRKRRHFSSLSPTAATAKKMPFLPVSEDKKLDTAVLQYQNQKLKQKLEAQKVE 60
Query: 61 YSALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARES-SNGQESRCLSIIE 119
SALENKF+QLKE QQ Y++TL +VNK+W EL+ +LE+CS+ ++S S G+ + S E
Sbjct: 61 CSALENKFSQLKETQQSYNTTLTLVNKTWRELVDNLETCSVHLKDSASAGRHVKLPSTTE 120
Query: 120 DVTPHPSHDAFLSRLMETGATESSSADNCPNQMEEDRETGIPRTKNIVSNILAAVDNLWH 179
D DAFLSRL+ETGATES SA++ ++MEEDR T +TKN +SNI++ +++LW
Sbjct: 121 DGNS-CLQDAFLSRLIETGATESCSANDFSDRMEEDRPTSCGKTKNSLSNIVSTINDLWC 179
Query: 180 LKGGLYAAVLKDL-QDGGSKQKASSNLQSEVKNLRLALMDLHLKHKSLTRELQSRQDIDA 238
LK GLYAAVL+ L +DG +K SS+L +EV N+RLA DLHLKHKS+TR++QS +DIDA
Sbjct: 180 LKDGLYAAVLEALPEDGLCNKKISSDLHAEVNNMRLAFGDLHLKHKSVTRDMQSHRDIDA 239
Query: 239 KDKAKLNRLKGELESAVKELEECNCKLAALRAERDVTKGAFFPVLNLGNKHVAGDRVRDE 298
K+KA+L RL+GELES V ELEE NCKL L+AERD KGAFFP+L+LG+K+VAGD+ RD+
Sbjct: 240 KNKAELKRLRGELESTVAELEESNCKLVTLKAERDAAKGAFFPILSLGSKNVAGDKARDK 299
Query: 299 QRDLRDMESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLKSVKCLSSSKAFLS 358
Q+DL DME+ KEL+DQ+S +LLELK L++ RI +L+QL NLQNTLK+VKC+SSS A++
Sbjct: 300 QKDLHDMEATLKELLDQSSSRLLELKALYEERIGILKQLSNLQNTLKNVKCISSSSAYVL 359
Query: 359 VKNQLEKSKSEVFKYQALFEKLQVEKDNLAWRETELNMKIDLVDVFRRSSAVTDSKIADL 418
V +QLEKSK+EV YQALFEKLQVEKDNL WRE E+NMK D VDVFRRSS VTDS++++L
Sbjct: 360 VTDQLEKSKAEVVHYQALFEKLQVEKDNLVWREKEVNMKNDFVDVFRRSSVVTDSRLSEL 419
Query: 419 GIEIQKQIDEKNRIEMRLEEASREPGRKEIIAEFRALVSSFPEDMSAMQRQLSKYKEAAL 478
IEIQ QI+E+N IE++LEEASREPGRKEIIAEF+AL+SSFP++M MQ QL KYKEAA
Sbjct: 420 RIEIQNQINERNLIEIKLEEASREPGRKEIIAEFKALLSSFPDNMGTMQNQLRKYKEAAS 479
Query: 479 DIHILRADVLSLTNVLERKVKECETLLASSADQVAEIHKLQAMVQDLTDSNLELKLILDM 538
D+H LRADV SL++VLERK KE ETL SADQVA+I KLQA++QDL +S+++LKLIL+M
Sbjct: 480 DVHSLRADVQSLSSVLERKEKELETLSTRSADQVADIRKLQALIQDLEESDIQLKLILEM 539
Query: 539 YRRESTDSRFV 549
YR ES DSR V
Sbjct: 540 YRCESVDSRDV 550
>gi|225453456|ref|XP_002274055.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-like 1-like [Vitis
vinifera]
Length = 901
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/574 (63%), Positives = 454/574 (79%), Gaps = 26/574 (4%)
Query: 1 MGSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVE 60
MGSTGEPDRKRRHFSS+SPTAATAKK PF P SE+KK+DTAVLQ+QNQKL QKLE QKVE
Sbjct: 1 MGSTGEPDRKRRHFSSLSPTAATAKKMPFLPVSEDKKLDTAVLQYQNQKLKQKLEAQKVE 60
Query: 61 YSALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARES-SNGQESRCLSIIE 119
SALENKF+QLKE QQ Y++TL +VNK+W EL+ +LE+CS+ ++S S G+ + S E
Sbjct: 61 CSALENKFSQLKETQQSYNTTLTLVNKTWRELVDNLETCSVHLKDSASAGRHVKLPSTTE 120
Query: 120 DVTPHPSHDAFLSRLMETGATESSSADNCPNQMEEDRETGIPRTKNIVSNILAAVDNLWH 179
D DAFLSRL+ETGATES SA++ ++MEEDR T +TKN +SNI++ +++LW
Sbjct: 121 DGNS-CLQDAFLSRLIETGATESCSANDFSDRMEEDRPTSCGKTKNSLSNIVSTINDLWC 179
Query: 180 LKGGLYAAVLKDL-QDGGSKQKASSNLQSEVKNLRLALMDLHLKHKSLTRELQSRQDIDA 238
LK GLYAAVL+ L +DG +K SS+L +EV N+RLA DLHLKHKS+TR++QS +DIDA
Sbjct: 180 LKDGLYAAVLEALPEDGLCNKKISSDLHAEVNNMRLAFGDLHLKHKSVTRDMQSHRDIDA 239
Query: 239 KDKAKLNRLKGELESAVKELEECNCKLAALRAERDVTKGAFFPVLNLGNKHVAGDRVRDE 298
K+KA+L RL+GELES V ELEE NCKL L+AERD KGAFFP+L+LG+K+VAGD+ RD+
Sbjct: 240 KNKAELKRLRGELESTVAELEESNCKLVTLKAERDAAKGAFFPILSLGSKNVAGDKARDK 299
Query: 299 QRDLRDMESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLKSVKCLSSSKAFLS 358
Q+DL DME+ KEL+DQ+S +LLELK L++ RI +L+QL NLQNTLK+VKC+SSS A++
Sbjct: 300 QKDLHDMEATLKELLDQSSSRLLELKALYEERIGILKQLSNLQNTLKNVKCISSSSAYVL 359
Query: 359 VKNQLEKSKSEVFKYQALFEKLQVEKDNLAWRETELNMKIDLVDVFRRSSAVTDSKIADL 418
V +QLEKSK+EV YQALFEKLQVEKDNL WRE E+NMK D VDVFRRSS VTDS++++L
Sbjct: 360 VTDQLEKSKAEVVHYQALFEKLQVEKDNLVWREKEVNMKNDFVDVFRRSSVVTDSRLSEL 419
Query: 419 GIEIQKQIDEKNRIEMRLEEASREPGRKEIIAEFRALVSSFPEDMSAMQRQLSKYKEAAL 478
IEIQ QI+E+N IE++LEEASREPGRKEIIAEF+AL+SSFP++M MQ QL KYKEAA
Sbjct: 420 RIEIQNQINERNLIEIKLEEASREPGRKEIIAEFKALLSSFPDNMGTMQNQLRKYKEAAS 479
Query: 479 DIHILRADVLSLTNVLERKVKECETLLASSADQVAEIHKLQAM----------------- 521
D+H LRADV SL++VLERK KE ETL SADQVA+I KLQA+
Sbjct: 480 DVHSLRADVQSLSSVLERKEKELETLSTRSADQVADIRKLQALLTLKLPTYHKAKGRGGV 539
Query: 522 ------VQDLTDSNLELKLILDMYRRESTDSRFV 549
+QDL +S+++LKLIL+MYR ES DSR V
Sbjct: 540 KYTFVQIQDLEESDIQLKLILEMYRCESVDSRDV 573
>gi|224067588|ref|XP_002302510.1| histone ubiquitination proteins group [Populus trichocarpa]
gi|222844236|gb|EEE81783.1| histone ubiquitination proteins group [Populus trichocarpa]
Length = 877
Score = 673 bits (1737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/557 (63%), Positives = 433/557 (77%), Gaps = 16/557 (2%)
Query: 1 MGSTGEPDRKRRHFSSIS-PTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKV 59
MGSTGEPDRKRRHFSSIS P AA AKK P +DT VLQ+QNQKL QKLE QKV
Sbjct: 1 MGSTGEPDRKRRHFSSISSPPAAMAKKQP--------ALDTTVLQYQNQKLQQKLEAQKV 52
Query: 60 EYSALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSNGQESRCLSIIE 119
E+ AL N+F+QLKE+QQPY+STL VNKSWE L++DLE+CS R RE SNGQ+ + + + +
Sbjct: 53 EHFALGNRFSQLKEKQQPYNSTLNAVNKSWEVLVSDLETCSNRTREWSNGQDVKHIPVTK 112
Query: 120 DVTPHPSHDAFLSRLMETGATESSSADNCPNQMEEDRETGIPRTKNIVSNILAAVDNLWH 179
D + DAFLSRLMETGATESSS++NCP+QME D ET + KN+V NI+ ++ LWH
Sbjct: 113 DESSSFLKDAFLSRLMETGATESSSSNNCPDQMEVDIETAFEKNKNVVHNIVDTINGLWH 172
Query: 180 LKGGLYAAVLKDL-QDGGSKQKASSNLQSEVKNLRLALMDLHLKHKSLTRELQSRQDIDA 238
LK GL+AAVLK L +D +Q S+ L+ E+KNLR L DLHLKHKSL ELQ+ +D DA
Sbjct: 173 LKDGLHAAVLKQLPEDDACRQMTSNELEMELKNLRSGLSDLHLKHKSLAMELQNHRDADA 232
Query: 239 KDKAKLNRLKGELESAVKELEECNCKLAALRAERDVTKGAFFPVLNLGNKHVAGDRVRDE 298
K+KA+L LKGELE AV EL++ NCKLA L+AERD TKGAFFPVLNLG+KH+ GD+VRD+
Sbjct: 233 KNKAELKHLKGELEIAVAELKDSNCKLATLKAERDATKGAFFPVLNLGSKHIGGDKVRDK 292
Query: 299 QRDLRDMESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLKSVKCLSSSKAFLS 358
Q+DL++MES KEL+DQAS +L ELK LH+ R+K+LQ+L NLQN LK+VK +SSS+A+L
Sbjct: 293 QKDLQEMESAVKELLDQASSRLQELKDLHEERLKILQKLSNLQNLLKNVKSISSSQAYLL 352
Query: 359 VKNQLEKSKSEVFKYQALFEKLQVEKDNLAWRETELNMKIDLVDVFRRSSAVTDSKIADL 418
V++QLEKSKSEV +Y+AL EKLQVEKDNL W+E ELN+K DLVDV RRS+AV DS+IA L
Sbjct: 353 VRDQLEKSKSEVLQYRALIEKLQVEKDNLVWKERELNVKNDLVDVCRRSTAVVDSRIAVL 412
Query: 419 GIEIQKQIDEKNRIEMRLEEASREPGRKEIIAEFRALVSSFPEDMSAMQRQLSKYKEAAL 478
G EIQKQI+E+N IE +LEEASREPGRKEIIAEF+ALVSSFPE+MS+MQRQLS K+A+
Sbjct: 413 GKEIQKQINERNMIETKLEEASREPGRKEIIAEFKALVSSFPEEMSSMQRQLSNSKDASS 472
Query: 479 DIHILRADVLSLTNVLERKVKE--CETLLASSADQVAEIH----KLQAMVQDLTDSNLEL 532
DIH LRAD SL+ VL+RKV C L + Q+ + + VQDL +S LEL
Sbjct: 473 DIHSLRADGQSLSTVLDRKVGTFWCMPLYSFPLIQLMGTNICFSETGQRVQDLKESELEL 532
Query: 533 KLILDMYRRESTDSRFV 549
KLILDMYR EST SR V
Sbjct: 533 KLILDMYRGESTYSRDV 549
>gi|224136330|ref|XP_002326834.1| histone ubiquitination proteins group [Populus trichocarpa]
gi|222835149|gb|EEE73584.1| histone ubiquitination proteins group [Populus trichocarpa]
Length = 884
Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/570 (59%), Positives = 417/570 (73%), Gaps = 58/570 (10%)
Query: 38 IDTAVLQFQNQKLVQKLETQKVEYSALENKFAQLKERQQPYDSTLKVVNKSWEELITDLE 97
+DTAVLQ+QNQKL QKLE QKVE+SALENKF+ KE+Q+PY+STLK VNKSWE L+TDLE
Sbjct: 18 LDTAVLQYQNQKLQQKLEAQKVEHSALENKFSLQKEKQKPYNSTLKAVNKSWEVLVTDLE 77
Query: 98 SCSMRARESSNGQESRCLSIIEDVTPHPSHDAFLSRLMETGATESSSADNCPNQMEEDRE 157
+CS R RE NGQ+ + + I D DAFLSRLMETGATESSSA NCP+QME DRE
Sbjct: 78 TCSNRTREWINGQDVKHVPIARDGGSSSLKDAFLSRLMETGATESSSATNCPDQMEVDRE 137
Query: 158 TGIPRTKNIVSNILAAVDNLWHLKGGLYAAVLKDLQDGG--------------------- 196
T + K I N++A ++ LW+LK GL AAVLK L + G
Sbjct: 138 TAFEKNKRIAHNLVATINGLWYLKDGLRAAVLKQLTEDGRSILPQVSVLYLSWATSFRVF 197
Query: 197 ------------SKQKASSNLQSEVKNLRLALMDLHLKHKSLTRELQSRQDIDAKDKAKL 244
++ S+ L++E+KNLRL L DLHLKHKSL RELQ+ +D DAK+KA+L
Sbjct: 198 SVPMYVSPLLDACRETISNELETELKNLRLGLSDLHLKHKSLARELQNHRDSDAKNKAEL 257
Query: 245 NRLKGELESAVKELEECNCKLAALRAERDVTKGAFFPVLNLGNKHVAGDRVRDEQRDLRD 304
LKGELE+ V EL + NCKLA L+AER+ TKGAFFPVLN+G+KH AGD+VRD+Q+DL++
Sbjct: 258 KHLKGELETTVAELNDSNCKLATLKAERNATKGAFFPVLNMGSKHAAGDQVRDKQKDLQE 317
Query: 305 MESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLKSVKCLSSSKAFLSVKNQLE 364
MES KEL+DQAS +L ELK LH+ R+K+LQ+L NLQN LK+VK +SSS+A+L V++QLE
Sbjct: 318 MESAVKELLDQASSRLQELKDLHEERLKILQKLSNLQNLLKNVKSISSSRAYLLVRDQLE 377
Query: 365 KSKSEVFKYQALFEKLQVEKDNLAWRETELNMKIDLVDVFRRSSAVTDSKIADLGIEIQK 424
KSKS V Y+ALFEKLQVEKDNL W+E ELNMK DLVDV RRS+AV DS++ADLG EIQK
Sbjct: 378 KSKSMVLHYRALFEKLQVEKDNLVWKERELNMKNDLVDVCRRSTAVVDSRVADLGKEIQK 437
Query: 425 QIDEKNRIEMRLEEASREPGRKEIIAEFRALVSSFPEDMSAMQRQLSKYKEAALDIHILR 484
QI+E+N IE LEE+SREPGRK++IAEF+ALVSSFPE+M +MQ QLS +KEA+ DIH LR
Sbjct: 438 QINERNMIETNLEESSREPGRKDVIAEFKALVSSFPEEMGSMQSQLSNFKEASSDIHSLR 497
Query: 485 ADVLSLTNVLERKVKECETLLASSADQVAEIHKLQAM----------------------- 521
ADV SL+ VL+RK K+C +L + S Q+AEIHKLQ++
Sbjct: 498 ADVQSLSTVLDRKGKQCGSLSSRSTSQIAEIHKLQSVKYYITDKFKCNLWSDNHLTRSAG 557
Query: 522 --VQDLTDSNLELKLILDMYRRESTDSRFV 549
VQDL ++ LELKLILDMY+REST SR V
Sbjct: 558 TRVQDLNENILELKLILDMYQRESTYSRDV 587
>gi|356498180|ref|XP_003517931.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-like 1-like [Glycine
max]
Length = 874
Score = 635 bits (1638), Expect = e-179, Method: Compositional matrix adjust.
Identities = 327/552 (59%), Positives = 421/552 (76%), Gaps = 9/552 (1%)
Query: 1 MGSTGEPDRKRRHFSSISPT--AATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQK 58
MGS + DRKRRHFSS+SPT AA AKK PF P +D VLQ+QNQKL QKLETQK
Sbjct: 1 MGSMSDSDRKRRHFSSLSPTPAAAIAKKLPFLP------LDIVVLQYQNQKLTQKLETQK 54
Query: 59 VEYSALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSNGQESRCLSII 118
+EY+ LEN+F+ LKERQ+ YDSTL+VV KSWE+L+ DLE CS R RESS+ SR SI+
Sbjct: 55 LEYAGLENRFSHLKERQKSYDSTLEVVKKSWEQLVDDLELCSERTRESSSKTNSRFASIM 114
Query: 119 EDVTPHPSHDAFLSRLMETGATESSSADNCPNQMEEDRETGIPRTKNIVSNILAAVDNLW 178
ED +P D FLSRLM+T ATE +S+ N NQMEE RE I + K+I+ N++ AV+NLW
Sbjct: 115 EDGSPSTVQDVFLSRLMQTDATECASSYNFANQMEEHREITIEKAKSILKNMVTAVNNLW 174
Query: 179 HLKGGLYAAVLKDLQ-DGGSKQKASSNLQSEVKNLRLALMDLHLKHKSLTRELQSRQDID 237
L GL+ A+LK L D +QK SS+L+ VKNLRL +LHLKHKSL E ++ +D
Sbjct: 175 VLMDGLHTALLKKLPGDDLCRQKLSSDLEVIVKNLRLEFSELHLKHKSLASEFLIQRGLD 234
Query: 238 AKDKAKLNRLKGELESAVKELEECNCKLAALRAERDVTKGAFFPVLNLGNKHVAGDRVRD 297
AK+KA L RLKGEL + VKELEE N KLA L+AERD KGA PVLN+G+ H+ D+++D
Sbjct: 235 AKNKADLERLKGELANTVKELEEINHKLATLKAERDAAKGAVLPVLNVGSTHIPSDKIKD 294
Query: 298 EQRDLRDMESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLKSVKCLSSSKAFL 357
+Q+DL+DMES KEL+DQ S +L++LK LH+ RI++LQQL +LQNTLK++KC++SS AF
Sbjct: 295 KQKDLQDMESTLKELLDQGSARLMDLKSLHEERIRILQQLCDLQNTLKNLKCITSSHAFQ 354
Query: 358 SVKNQLEKSKSEVFKYQALFEKLQVEKDNLAWRETELNMKIDLVDVFRRSSAVTDSKIAD 417
VK+Q+EKSKS+V +YQAL+EKLQ EKDNLAWRE E +K D DVF+RS AV++ ++AD
Sbjct: 355 LVKDQIEKSKSDVLEYQALYEKLQFEKDNLAWREREWYIKNDFADVFQRSVAVSEFRVAD 414
Query: 418 LGIEIQKQIDEKNRIEMRLEEASREPGRKEIIAEFRALVSSFPEDMSAMQRQLSKYKEAA 477
L EIQK+I+E+N IE +L+E +REPGRK+IIAEF++LVSSFP++M +MQ QL KYKE+A
Sbjct: 415 LRSEIQKKIEERNVIENKLKEEAREPGRKQIIAEFKSLVSSFPDEMGSMQSQLRKYKESA 474
Query: 478 LDIHILRADVLSLTNVLERKVKECETLLASSADQVAEIHKLQAMVQDLTDSNLELKLILD 537
DIH LRADV S++++L+RKVKEC+ S VAEI +L +VQDL +S +L+LIL+
Sbjct: 475 SDIHSLRADVKSVSSILDRKVKECDVFSVRSVGLVAEIKRLLGVVQDLRESEWDLQLILE 534
Query: 538 MYRRESTDSRFV 549
M+RRES DSR V
Sbjct: 535 MFRRESIDSRDV 546
>gi|356539611|ref|XP_003538290.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-like 1-like [Glycine
max]
Length = 873
Score = 630 bits (1626), Expect = e-178, Method: Compositional matrix adjust.
Identities = 328/552 (59%), Positives = 417/552 (75%), Gaps = 10/552 (1%)
Query: 1 MGSTGEPDRKRRHFSSISPT--AATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQK 58
MGS + DRKRRHFSS+SPT AATAKK PF P +D VLQ+QNQKL QKLETQK
Sbjct: 1 MGSMNDSDRKRRHFSSLSPTPAAATAKKLPFLP------LDIVVLQYQNQKLTQKLETQK 54
Query: 59 VEYSALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSNGQESRCLSII 118
+EY+ LEN+F+ LKE Q+ YDSTL VV KSWE+L+ DLE CS R RESS SR SI+
Sbjct: 55 LEYAGLENRFSLLKESQKSYDSTLAVVKKSWEQLVDDLELCSERTRESSRKINSRFASIM 114
Query: 119 EDVTPHPSHDAFLSRLMETGATESSSADNCPNQMEEDRETGIPRTKNIVSNILAAVDNLW 178
ED +P D FLSRLM+T ATE +S N NQMEE RE + K+I+ N++ AV+NLW
Sbjct: 115 EDGSPSTVQDVFLSRLMQTDATECASTYNFANQMEEHREITTEKAKSILKNMVTAVNNLW 174
Query: 179 HLKGGLYAAVLKDLQDGG-SKQKASSNLQSEVKNLRLALMDLHLKHKSLTRELQSRQDID 237
L GL+ A LK L G +QK SS+L+ VKNLRL +LH KHKSL E Q ++D++
Sbjct: 175 VLMDGLHTAFLKKLPGGDLCRQKLSSDLEVIVKNLRLEFSELHSKHKSLASEFQIQRDLN 234
Query: 238 AKDKAKLNRLKGELESAVKELEECNCKLAALRAERDVTKGAFFPVLNLGNKHVAGDRVRD 297
AK+KA L RLKGEL S VKELEE N KLA L+AERD KG P+LN+G+ H+ D+++D
Sbjct: 235 AKNKADLERLKGELASTVKELEESNHKLATLKAERDAAKGVL-PLLNVGSTHIPSDKIKD 293
Query: 298 EQRDLRDMESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLKSVKCLSSSKAFL 357
+Q+DL+DMES KEL+DQ S +L+ELK LH+ RI++LQQL +LQNTLK++KC++SS AF
Sbjct: 294 KQKDLQDMESTLKELLDQGSARLMELKSLHEERIRILQQLCDLQNTLKNLKCITSSHAFQ 353
Query: 358 SVKNQLEKSKSEVFKYQALFEKLQVEKDNLAWRETELNMKIDLVDVFRRSSAVTDSKIAD 417
V++Q+EKSK+EV +YQAL+EKLQVEKDNLAWRE E +K DL DVF+RS AV+D ++AD
Sbjct: 354 LVRDQIEKSKAEVLEYQALYEKLQVEKDNLAWREREWYIKNDLADVFQRSVAVSDFRVAD 413
Query: 418 LGIEIQKQIDEKNRIEMRLEEASREPGRKEIIAEFRALVSSFPEDMSAMQRQLSKYKEAA 477
L EIQK+I+E+ IE +L+E +R PGRK+IIAEF++LVSSFP++M +MQ QL KYKE+A
Sbjct: 414 LRFEIQKKIEERYVIENKLKEEARGPGRKQIIAEFKSLVSSFPDEMGSMQIQLRKYKESA 473
Query: 478 LDIHILRADVLSLTNVLERKVKECETLLASSADQVAEIHKLQAMVQDLTDSNLELKLILD 537
DIH LRADV S++++L+RKVKEC+ SA Q+AEI +L +VQDL +S +LKLIL
Sbjct: 474 SDIHSLRADVKSVSSILDRKVKECDVFSVRSAGQLAEIKRLLGVVQDLRESERDLKLILV 533
Query: 538 MYRRESTDSRFV 549
M+RRES DSR V
Sbjct: 534 MFRRESIDSRVV 545
>gi|449431978|ref|XP_004133777.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-like 1-like [Cucumis
sativus]
gi|449478010|ref|XP_004155194.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-like 1-like [Cucumis
sativus]
Length = 878
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 314/550 (57%), Positives = 406/550 (73%), Gaps = 1/550 (0%)
Query: 1 MGSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVE 60
MGST E DRKRRHFS+ISPTAATAKK PF P SE+KK+D AVLQ+QNQKL+QKLE QKVE
Sbjct: 1 MGSTVESDRKRRHFSTISPTAATAKKAPFLPVSEDKKLDVAVLQYQNQKLIQKLEVQKVE 60
Query: 61 YSALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSNGQESRCLSIIED 120
Y +L+NK+AQLKE+Q+PYD+T+ VV WEEL+ LE+ S+R R + ++ D
Sbjct: 61 YKSLQNKYAQLKEKQEPYDTTVAVVKNCWEELVNGLETSSVRMRRWRSKRDGEHTIAGVD 120
Query: 121 VTPHPSHDAFLSRLMETGATESSSADNCPNQMEEDRETGIPRTKNIVSNILAAVDNLWHL 180
+ DA LSRL ETGAT+SSS + MEE+ E+ +TK I +I +++NLW+L
Sbjct: 121 GSSSSFEDAVLSRLAETGATQSSSTYSSSKHMEEETESPCEKTKTIERSIETSIENLWYL 180
Query: 181 KGGLYAAVLKDL-QDGGSKQKASSNLQSEVKNLRLALMDLHLKHKSLTRELQSRQDIDAK 239
K GL+A +L +L +D +++ S +L EV+N+RL + D K K L +EL+ +D+DAK
Sbjct: 181 KDGLHATLLNELPKDDSFRKRTSGDLVKEVRNMRLRVKDFLFKQKVLAQELEKHRDLDAK 240
Query: 240 DKAKLNRLKGELESAVKELEECNCKLAALRAERDVTKGAFFPVLNLGNKHVAGDRVRDEQ 299
KA+L LK EL SAV ELEE N KL LRAE D K A FPVLNL KH A +VRD+Q
Sbjct: 241 TKAELKVLKVELGSAVAELEESNSKLTKLRAEHDAAKKAGFPVLNLTGKHSASGKVRDKQ 300
Query: 300 RDLRDMESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLKSVKCLSSSKAFLSV 359
+DLRDMES KEL DQA +L EL LH+GR+K+L++L ++QNT+KSVK +SSSK +L +
Sbjct: 301 KDLRDMESSLKELKDQAVDRLAELNSLHEGRLKMLRRLSDIQNTMKSVKTISSSKPYLLL 360
Query: 360 KNQLEKSKSEVFKYQALFEKLQVEKDNLAWRETELNMKIDLVDVFRRSSAVTDSKIADLG 419
++++EK K EV + QALFEKLQVEKDN+ W+E ELN+K +++DV RRSS V+D++I DL
Sbjct: 361 RDRIEKLKLEVNEQQALFEKLQVEKDNIMWKEKELNIKNNILDVLRRSSTVSDTRINDLE 420
Query: 420 IEIQKQIDEKNRIEMRLEEASREPGRKEIIAEFRALVSSFPEDMSAMQRQLSKYKEAALD 479
I IQKQ D K IE +L E +EPGRK+I++EFRALVSSFPE M +MQ QL KYKEAA D
Sbjct: 421 ILIQKQKDGKQSIENKLVEVLKEPGRKKIVSEFRALVSSFPEAMGSMQSQLHKYKEAASD 480
Query: 480 IHILRADVLSLTNVLERKVKECETLLASSADQVAEIHKLQAMVQDLTDSNLELKLILDMY 539
+H +RAD+ SL+++++R KECE L + S DQ AEI KLQA VQDLT+ N ELKLI+DMY
Sbjct: 481 VHSVRADLQSLSSIIDRMEKECENLSSRSKDQQAEIQKLQATVQDLTEVNRELKLIIDMY 540
Query: 540 RRESTDSRFV 549
REST+SR V
Sbjct: 541 SRESTESREV 550
>gi|297828217|ref|XP_002881991.1| histone mono-ubiquitination 1 [Arabidopsis lyrata subsp. lyrata]
gi|297327830|gb|EFH58250.1| histone mono-ubiquitination 1 [Arabidopsis lyrata subsp. lyrata]
Length = 878
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 314/550 (57%), Positives = 401/550 (72%), Gaps = 5/550 (0%)
Query: 1 MGSTGEPDRKRRHFSSISPT--AATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQK 58
M STGEPDRKRRHFSSISP+ AA KK PFF S E K+DTAVLQFQN +L QKLE Q+
Sbjct: 1 MASTGEPDRKRRHFSSISPSEAAAAVKKQPFFWPSSEDKLDTAVLQFQNLQLSQKLEAQQ 60
Query: 59 VEYSALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSNGQESRCLSII 118
VE S LE+K +Q+KE+Q PY S+LK V+KSWE+L +ESCS+R +SS+G R ++
Sbjct: 61 VECSILEDKLSQIKEKQLPYSSSLKTVHKSWEKLTATVESCSVRVSDSSSGAH-RFVNKE 119
Query: 119 EDVTPHPSHDAFLSRLMETGATESSSADNCPNQMEEDRETGIPRTKNIVSNILAAVDNLW 178
+ +P +D F++RL+ETGATESSS++ C N+MEE+ + +SN++AA D+L
Sbjct: 120 DGSSPAVKND-FINRLLETGATESSSSNICSNRMEENGVNTSSQMTQTLSNLVAATDDLR 178
Query: 179 HLKGGLYAAVLK-DLQDGGSKQKASSNLQSEVKNLRLALMDLHLKHKSLTRELQSRQDID 237
LK LY VL+ L Q A S L+SE+K+ R L D+ +K KSL+RELQS +D D
Sbjct: 179 CLKDDLYPTVLRTSLGKDLCGQLALSELESEIKSFRGDLDDVLVKFKSLSRELQSHRDAD 238
Query: 238 AKDKAKLNRLKGELESAVKELEECNCKLAALRAERDVTKGAFFPVLNLGNKHVAGDRVRD 297
AK +A L R++GELE V EL++CN L+ALRAERD T GAFFPVL+LGNK DR RD
Sbjct: 239 AKVRADLKRIRGELEDEVVELQQCNGDLSALRAERDATAGAFFPVLSLGNKLATSDRERD 298
Query: 298 EQRDLRDMESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLKSVKCLSSSKAFL 357
+QRDL DME+V KEL AS +L ELK LH+ R K+L+++ NLQN KSV+C+SSS+A L
Sbjct: 299 KQRDLHDMETVLKELTVLASGRLQELKDLHEERTKMLEKMSNLQNKSKSVRCISSSQACL 358
Query: 358 SVKNQLEKSKSEVFKYQALFEKLQVEKDNLAWRETELNMKIDLVDVFRRSSAVTDSKIAD 417
S+K+QL+KSK VF+Y AL EKLQVEKD++ W+E E+N+K +LVDV RR+SAV DS++A
Sbjct: 359 SLKDQLKKSKEAVFQYMALLEKLQVEKDSIVWKEREMNIKNELVDVSRRTSAVADSRMAS 418
Query: 418 LGIEIQKQIDEKNRIEMRLEEASREPGRKEIIAEFRALVSSFPEDMSAMQRQLSKYKEAA 477
L IQKQ+DEK RI+ RL SRE GRKEI A+ +AL+SSFPE+MS+M+ QL YKE A
Sbjct: 419 LDSVIQKQLDEKMRIKTRLGNISRERGRKEIFADMKALISSFPEEMSSMRNQLDNYKETA 478
Query: 478 LDIHILRADVLSLTNVLERKVKECETLLASSADQVAEIHKLQAMVQDLTDSNLELKLILD 537
IH LRADV SL+ VL RK KECE L +SAD +++ L A V DL +S+ ELKL LD
Sbjct: 479 GGIHSLRADVQSLSGVLCRKTKECEALHLTSADYASQLGDLNATVCDLKNSHEELKLFLD 538
Query: 538 MYRRESTDSR 547
MY+RESTD R
Sbjct: 539 MYKRESTDPR 548
>gi|357504631|ref|XP_003622604.1| E3 ubiquitin-protein ligase BRE1-like protein [Medicago truncatula]
gi|355497619|gb|AES78822.1| E3 ubiquitin-protein ligase BRE1-like protein [Medicago truncatula]
Length = 947
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 318/620 (51%), Positives = 426/620 (68%), Gaps = 72/620 (11%)
Query: 1 MGSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVE 60
MGS GE DRKRR FSS+SPT ATAKK PF P SE+KK+D AVLQ+QNQKL QKLETQK+E
Sbjct: 1 MGSMGEHDRKRR-FSSLSPTPATAKKLPFLPVSEDKKLDIAVLQYQNQKLTQKLETQKLE 59
Query: 61 YSALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSNGQESR------- 113
Y+ALENKF+QLKE+QQ YDSTL VV KSWE+L+ DLESCS RESS+ +SR
Sbjct: 60 YAALENKFSQLKEKQQSYDSTLAVVKKSWEQLVNDLESCSEHIRESSSKVDSRFASSTDG 119
Query: 114 --------CLSIIEDVT------PHPS----HDAFLSRLMETGATESSSADNCPNQMEED 155
C + +++ P+ S D FLSRL++TGATESSS+ + N+ E+
Sbjct: 120 TLFASEFICQNYFTEISVLGVDYPYGSSSTVQDVFLSRLLQTGATESSSSYHFANETEQH 179
Query: 156 RETGIPRTKNIVSNILAAVDNLWHLKGGLYAAVLKDLQ-DGGSKQKASSNLQSEVKNLRL 214
RE + K+I++NI+ +++N LK G + +LK L+ D Q S++L+ E KNLRL
Sbjct: 180 REITAEKAKSILNNIVTSINNFQCLKDGFHTVLLKKLRGDVSCGQMLSNDLEVESKNLRL 239
Query: 215 ALMDLHLKHKSLTRELQSRQDIDAKDKAKLNRLKGELESAVKELEECNCKLAALRAERDV 274
AL +LHLKHKSL + ++ +D+DAK+KA+L RLKGELES V ELEE N KLA L+ E+D
Sbjct: 240 ALSELHLKHKSLASDFRTHRDLDAKNKAELKRLKGELESTVAELEESNQKLATLKVEKDT 299
Query: 275 TKGAFFPVLNLGNKHVAGDRVRDEQRDLRDMESVHKELMDQASHQLLELKGLHDGRI--- 331
KGA PVL +GN + D+++D+Q+DL+DMES K+L+DQAS + +ELK LH+ RI
Sbjct: 300 AKGAVLPVLAVGNTLIPNDKIKDKQKDLQDMESTLKDLLDQASTRAVELKNLHEERIRLL 359
Query: 332 --------KVLQQLYNLQ-----------------------NTLKSVKCLSSSKAFLSVK 360
K ++ + Q NTLK++KC++SS AF V+
Sbjct: 360 QQLCDLQLKTFRKCWTGQKMQKVTGKRGWSDSAMEGKLSHENTLKNLKCITSSHAFQLVR 419
Query: 361 NQLEKSKSEVFKYQALFEKLQVEKDNLAWRETELNMKIDLVDVFRRSSAVTDSKIADLGI 420
+Q EKSKSEV +YQAL+EKLQ EKD+L WRE E +K DL D+F+RS V+D K+AD+
Sbjct: 420 DQTEKSKSEVQEYQALYEKLQAEKDSLTWREREWYIKNDLADLFQRSVEVSDLKVADIRT 479
Query: 421 EIQKQIDEKNRIEMRLEEASREPGRKEIIAEFRALVSSFPEDMSAMQRQLSKYKEAALDI 480
E++K I++++ IE +L+E +REPGRKEIIAEF++L+SSFPE+M +MQ QLSKYKE+A DI
Sbjct: 480 ELRKTIEQRDVIENKLKEEAREPGRKEIIAEFKSLLSSFPEEMGSMQSQLSKYKESASDI 539
Query: 481 HILRADVLSLTNVLERK-----------VKECETLLASSADQVAEIHKLQAMVQDLTDSN 529
H LRADV S++++L++K VKEC+ L SA Q+AEI++L A+VQDL +
Sbjct: 540 HSLRADVHSISSILDQKVGFCLYELYFLVKECDALSVRSAGQLAEINRLLAVVQDLRVTE 599
Query: 530 LELKLILDMYRRESTDSRFV 549
E+KLIL M+RRE+ DSR V
Sbjct: 600 DEMKLILRMFRRETIDSRDV 619
>gi|30689877|ref|NP_182022.2| E3 ubiquitin-protein ligase BRE1-like 1 [Arabidopsis thaliana]
gi|75303266|sp|Q8RXD6.1|BRE1A_ARATH RecName: Full=E3 ubiquitin-protein ligase BRE1-like 1;
Short=AtBRE1; AltName: Full=Protein HISTONE
MONOUBIQUITINATION 1; Short=AtHUB1
gi|19698951|gb|AAL91211.1| unknown protein [Arabidopsis thaliana]
gi|34098841|gb|AAQ56803.1| At2g44950 [Arabidopsis thaliana]
gi|330255395|gb|AEC10489.1| E3 ubiquitin-protein ligase BRE1-like 1 [Arabidopsis thaliana]
Length = 878
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 312/550 (56%), Positives = 402/550 (73%), Gaps = 5/550 (0%)
Query: 1 MGSTGEPDRKRRHFSSISPT--AATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQK 58
M STGEPDRKRRHFSSISP+ AA KK PFF S E K+DTAVLQFQN KL QKLE Q+
Sbjct: 1 MASTGEPDRKRRHFSSISPSEAAAAVKKQPFFWPSSEDKLDTAVLQFQNLKLSQKLEAQQ 60
Query: 59 VEYSALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSNGQESRCLSII 118
VE S LE+K +Q+KE+Q PY+S+LK V+KSWE+L +ESCS+R +SS+G R ++
Sbjct: 61 VECSILEDKLSQIKEKQLPYNSSLKTVHKSWEKLTASVESCSVRVSDSSSGAH-RFVNKE 119
Query: 119 EDVTPHPSHDAFLSRLMETGATESSSADNCPNQMEEDRETGIPRTKNIVSNILAAVDNLW 178
+ +P +D F++RL+ETGATESSS++ C NQMEE+ + + N++AA ++L
Sbjct: 120 DGSSPAVKND-FINRLLETGATESSSSNICSNQMEENGVNTSSQMTQTLYNLVAATEDLR 178
Query: 179 HLKGGLYAAVLK-DLQDGGSKQKASSNLQSEVKNLRLALMDLHLKHKSLTRELQSRQDID 237
LK LY VL+ +L Q A S L+SE+K+ R L D+ +K KSL+RELQS +D D
Sbjct: 179 CLKDELYPTVLRTNLGKDLCGQLALSELESEIKSFRGDLDDVLVKFKSLSRELQSHRDAD 238
Query: 238 AKDKAKLNRLKGELESAVKELEECNCKLAALRAERDVTKGAFFPVLNLGNKHVAGDRVRD 297
AK + L R++GELE V EL++CN L+ALRAERD T GAFFPVL+LGNK DR RD
Sbjct: 239 AKVRVDLKRIRGELEDEVVELQQCNGDLSALRAERDATAGAFFPVLSLGNKLATSDRERD 298
Query: 298 EQRDLRDMESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLKSVKCLSSSKAFL 357
+QRDL+DME+V KEL AS +L +LK LH+ R K+L ++ NLQN KSV+C+SSS+A L
Sbjct: 299 KQRDLQDMETVLKELTVLASGRLQQLKNLHEERTKMLGKMSNLQNKSKSVRCISSSQACL 358
Query: 358 SVKNQLEKSKSEVFKYQALFEKLQVEKDNLAWRETELNMKIDLVDVFRRSSAVTDSKIAD 417
S+K+QLEKSK VF+Y AL EKLQVEKD++ W+E E+N+K +L DV R++SAVTDS++A
Sbjct: 359 SLKDQLEKSKEAVFQYMALLEKLQVEKDSIVWKEREINIKNELGDVSRKTSAVTDSRMAS 418
Query: 418 LGIEIQKQIDEKNRIEMRLEEASREPGRKEIIAEFRALVSSFPEDMSAMQRQLSKYKEAA 477
L EIQKQ+DEK RI+ RL SRE GRKEI A+ +AL+SSFPE+MS+M+ QL+ YKE A
Sbjct: 419 LDSEIQKQLDEKMRIKTRLGNISRERGRKEIFADMKALISSFPEEMSSMRSQLNNYKETA 478
Query: 478 LDIHILRADVLSLTNVLERKVKECETLLASSADQVAEIHKLQAMVQDLTDSNLELKLILD 537
IH LRADV SL+ VL RK KE E L SAD +++ L A V DL +S+ ELKL LD
Sbjct: 479 GGIHSLRADVQSLSGVLCRKTKEYEALQLRSADYASQLGDLNATVCDLKNSHEELKLFLD 538
Query: 538 MYRRESTDSR 547
MY+RESTD+R
Sbjct: 539 MYKRESTDAR 548
>gi|255541122|ref|XP_002511625.1| protein binding protein, putative [Ricinus communis]
gi|223548805|gb|EEF50294.1| protein binding protein, putative [Ricinus communis]
Length = 420
Score = 556 bits (1433), Expect = e-155, Method: Compositional matrix adjust.
Identities = 277/396 (69%), Positives = 331/396 (83%), Gaps = 2/396 (0%)
Query: 1 MGSTGEPDRKRRHFSSIS-PTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKV 59
MGSTGEPDRKRRHF+SIS PTAA AKK PF SSE+KK+DTAVLQFQNQKLVQKLE QKV
Sbjct: 1 MGSTGEPDRKRRHFNSISSPTAAMAKKQPFSHSSEDKKLDTAVLQFQNQKLVQKLEAQKV 60
Query: 60 EYSALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSNGQESRCLSIIE 119
EYSALENK+ QLKE+QQPYDSTLK VNKSW L+TDLE S R RES+ GQ R SI E
Sbjct: 61 EYSALENKYTQLKEKQQPYDSTLKAVNKSWGVLVTDLEVHSNRTRESNIGQNIRSFSINE 120
Query: 120 DVTPHPSHDAFLSRLMETGATESSSADNCPNQMEEDRETGIPRTKNIVSNILAAVDNLWH 179
D DAFLSRL ETGATE+SS +NC N +EED E + KN++ NI++A+++LWH
Sbjct: 121 DGVSSSFEDAFLSRLAETGATETSSINNCLNHIEEDEENTSEKIKNMLYNIVSAINDLWH 180
Query: 180 LKGGLYAAVLKDL-QDGGSKQKASSNLQSEVKNLRLALMDLHLKHKSLTRELQSRQDIDA 238
LK GL+AA+LK++ +DG +QK S L++EVKNLRLAL DLHLKHK+ RELQS +DIDA
Sbjct: 181 LKDGLHAALLKEISEDGACRQKESYGLEAEVKNLRLALSDLHLKHKTFARELQSHRDIDA 240
Query: 239 KDKAKLNRLKGELESAVKELEECNCKLAALRAERDVTKGAFFPVLNLGNKHVAGDRVRDE 298
K+KA+LNRLKGELESAV ELEE NCKLA+L+AERD TKGAFFPVLN+GNKH +GD+ RD+
Sbjct: 241 KNKAELNRLKGELESAVSELEESNCKLASLKAERDATKGAFFPVLNVGNKHASGDKARDK 300
Query: 299 QRDLRDMESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLKSVKCLSSSKAFLS 358
QR+L++MES KEL+DQAS +L +LK LHD RIK+LQQL NLQN+LK++KC+SSS+A++
Sbjct: 301 QRNLQEMESTLKELLDQASSRLRDLKALHDERIKILQQLSNLQNSLKNLKCISSSQAYIL 360
Query: 359 VKNQLEKSKSEVFKYQALFEKLQVEKDNLAWRETEL 394
V++QLEKSKSEVF+YQAL EKLQVE+DNL WRE EL
Sbjct: 361 VRDQLEKSKSEVFQYQALHEKLQVERDNLVWREKEL 396
>gi|152013369|sp|Q7XU27.3|BRE1A_ORYSJ RecName: Full=E3 ubiquitin-protein ligase BRE1-like 1
gi|222629318|gb|EEE61450.1| hypothetical protein OsJ_15692 [Oryza sativa Japonica Group]
Length = 884
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 247/558 (44%), Positives = 359/558 (64%), Gaps = 11/558 (1%)
Query: 1 MGSTGEPDRKRRHFSSISPTAAT----AKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLET 56
MGSTGEPDRKRR SS++P AK+ P+SE+KK+D VL+++NQKL ++LE
Sbjct: 1 MGSTGEPDRKRRLSSSVAPGGGAPVSPAKRLAVAPTSEDKKLDFTVLKYKNQKLSEQLEA 60
Query: 57 QKVEYSALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSM-RARESSNGQESRCL 115
K EY ALENKFA LKE+Q+ ++ TL +VN SWE+L+ DL+S S ++ ++ S
Sbjct: 61 HKFEYRALENKFAGLKEKQRTHNETLSLVNSSWEQLVADLKSRSFCKSGSPNSSPGSGHN 120
Query: 116 SIIEDVTPHPSHDAFLSRLMETGATESSSA-DNCPNQMEEDRETGIPRTKNIVSNILAAV 174
++ +D T P L L+E+GATESS C + D T N + +I
Sbjct: 121 NVQKDGTCAPIERDTLRSLVESGATESSGCLPGC--HLGSDAPPLHLSTANALGDIFFPS 178
Query: 175 DNLWHLKGGLYAAVLKDL-QDGGSKQKASSNLQSEVKNLRL--ALMDLHLKHKSLTRELQ 231
+L A L L ++ SKQ S++ + AL +L LKHK L + Q
Sbjct: 179 SDLLQANEECALAALTKLPENDRSKQLQSTSSNLLSSLNNVVQALSNLQLKHKQLAEDYQ 238
Query: 232 SRQDIDAKDKAKLNRLKGELESAVKELEECNCKLAALRAERDVTKGAFFPVLNLGNKHVA 291
+++D A+ +A+ RLK EL SA ELEE N KLAAL+A+RD T+GA P LGNK++
Sbjct: 239 NQRDSSARKRAEHRRLKEELASAASELEETNYKLAALKAQRDNTQGARIPYPTLGNKNMP 298
Query: 292 GDRVRDEQRDLRDMESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLKSVKCLS 351
D+VRD+QR+++D+E+ HKEL + S +L+E+K LH+ RI++L ++ QN L K +
Sbjct: 299 EDKVRDKQREMQDLEATHKELSELISKRLVEIKRLHEERIEILNKIATFQNILMDFKSIR 358
Query: 352 SSKAFLSVKNQLEKSKSEVFKYQALFEKLQVEKDNLAWRETELNMKIDLVDVFRRSSAVT 411
SSKAF V ++L+KS++E+ YQ L EKLQV+KD W+E + N+K+DL ++ R S
Sbjct: 359 SSKAFQLVNDRLQKSQAELDHYQTLLEKLQVDKDKFVWQERQFNLKVDLAEIPERVSTYC 418
Query: 412 DSKIADLGIEIQKQIDEKNRIEMRLEEASREPGRKEIIAEFRALVSSFPEDMSAMQRQLS 471
+S IADL +IQK DEKN + ++LEEASREPGR ++I +F+ALVSS P +M AMQ +++
Sbjct: 419 ESSIADLKKDIQKLCDEKNMLILKLEEASREPGRNQVITKFKALVSSIPREMGAMQSEMT 478
Query: 472 KYKEAALDIHILRADVLSLTNVLERKVKECETLLASSADQVAEIHKLQAMVQDLTDSNLE 531
K+KEA+L+++ LRA+V SL+ +L RK ++ E SA ++I +LQ+++ DL +N E
Sbjct: 479 KHKEASLELNSLRAEVHSLSRILSRKERDNEEASCRSARAGSDITQLQSVISDLKQTNKE 538
Query: 532 LKLILDMYRRESTDSRFV 549
LKL DMY+RESTDSR +
Sbjct: 539 LKLFADMYKRESTDSREI 556
>gi|152013368|sp|A2XW69.2|BRE1A_ORYSI RecName: Full=E3 ubiquitin-protein ligase BRE1-like 1
gi|218195331|gb|EEC77758.1| hypothetical protein OsI_16895 [Oryza sativa Indica Group]
Length = 884
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 247/558 (44%), Positives = 358/558 (64%), Gaps = 11/558 (1%)
Query: 1 MGSTGEPDRKRRHFSSISPTAAT----AKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLET 56
MGSTGEPDRKRR SS++P AK+ P+SE+KK+D VL+++NQKL ++LE
Sbjct: 1 MGSTGEPDRKRRLSSSVAPGGGAPVSPAKRLAVAPTSEDKKLDFTVLKYKNQKLSEQLEA 60
Query: 57 QKVEYSALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSM-RARESSNGQESRCL 115
K EY ALENKFA LKE+Q+ ++ TL +VN SWE+L+ DL+S S ++ ++ S
Sbjct: 61 HKFEYRALENKFAGLKEKQRTHNETLSLVNSSWEQLVADLKSRSFCKSGSPNSSPGSGHN 120
Query: 116 SIIEDVTPHPSHDAFLSRLMETGATESSSA-DNCPNQMEEDRETGIPRTKNIVSNILAAV 174
++ +D T P L L+E+GATESS C + D T N + +I
Sbjct: 121 NVQKDGTCAPIERDTLRSLVESGATESSGCLPGC--HLGSDAPPLHLSTANALGDIFFPS 178
Query: 175 DNLWHLKGGLYAAVLKDL-QDGGSKQKASSNLQSEVKNLRL--ALMDLHLKHKSLTRELQ 231
+L A L L ++ SKQ S++ + AL +L LKHK L + Q
Sbjct: 179 SDLLQANEECALAALTKLPENDRSKQLQSTSSNLLSSLNNVVQALSNLQLKHKQLAEDYQ 238
Query: 232 SRQDIDAKDKAKLNRLKGELESAVKELEECNCKLAALRAERDVTKGAFFPVLNLGNKHVA 291
+++D A+ +A+ RLK EL SA ELEE N KLAAL+A+RD T+GA P LGNK +
Sbjct: 239 NQRDSSARKRAEHRRLKEELASAASELEETNYKLAALKAQRDNTQGARIPYPTLGNKSMP 298
Query: 292 GDRVRDEQRDLRDMESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLKSVKCLS 351
D+VRD+QR+++D+E+ HKEL + S +L+E+K LH+ RI++L ++ QN L K +
Sbjct: 299 EDKVRDKQREMQDLEATHKELSELISKRLVEIKRLHEERIEILNKIATFQNILMDFKSIR 358
Query: 352 SSKAFLSVKNQLEKSKSEVFKYQALFEKLQVEKDNLAWRETELNMKIDLVDVFRRSSAVT 411
SSKAF V ++L+KS++E+ YQ L EKLQV+KD W+E + N+K+DL ++ R S
Sbjct: 359 SSKAFQLVNDRLQKSQAELDHYQTLLEKLQVDKDKFVWQERQFNLKVDLAEIPERVSTYC 418
Query: 412 DSKIADLGIEIQKQIDEKNRIEMRLEEASREPGRKEIIAEFRALVSSFPEDMSAMQRQLS 471
+S IADL +IQK DEKN + ++LEEASREPGR ++I +F+ALVSS P +M AMQ +++
Sbjct: 419 ESSIADLKKDIQKLRDEKNMLILKLEEASREPGRNQVITKFKALVSSIPREMGAMQSEMT 478
Query: 472 KYKEAALDIHILRADVLSLTNVLERKVKECETLLASSADQVAEIHKLQAMVQDLTDSNLE 531
K+KEA+L+++ LRA+V SL+ +L RK ++ E SA ++I +LQ+++ DL +N E
Sbjct: 479 KHKEASLELNSLRAEVHSLSRILSRKERDNEEASCRSARAGSDITQLQSVISDLKQTNKE 538
Query: 532 LKLILDMYRRESTDSRFV 549
LKL DMY+RESTDSR +
Sbjct: 539 LKLFADMYKRESTDSREI 556
>gi|357157532|ref|XP_003577829.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-like 1-like
[Brachypodium distachyon]
Length = 876
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 249/564 (44%), Positives = 354/564 (62%), Gaps = 23/564 (4%)
Query: 1 MGSTGEPDRKRR---HFSSISPTAATAKKNPFFP-SSEEKKIDTAVLQFQNQKLVQKLET 56
MGSTGEPDRKRR F A A K P P S++KK+D AVL+++NQKL ++LE
Sbjct: 1 MGSTGEPDRKRRLSGSFPQQGVAAPVAAKRPALPPCSDDKKLDFAVLKYKNQKLSEQLEV 60
Query: 57 QKVEYSALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSNGQESRCLS 116
K Y ALE KF LK+RQ+ + T +VNKSWE L+T L+S S+ S N S S
Sbjct: 61 HKSGYRALEGKFDDLKQRQKAHHETQDLVNKSWESLVTGLKSISLCKSGSQNSSCSSGHS 120
Query: 117 -IIEDVTPHPSHDAFLSRLMETGATESSSADNCPNQMEEDRETGIPRTKNIVSNILAAVD 175
+ D P FLSRL+ETGATESS ME + + T +++ N+ +++D
Sbjct: 121 NVSTDGACIPKDKDFLSRLVETGATESSGC-----HMENNAHSS---TTDVLKNVFSSID 172
Query: 176 NLWHLKGGLYAAVLKDLQDGGSKQKASSNLQS---EVKNLRLALMDLHLKHKSLTRELQS 232
+ W A + L + S ++ S L E AL DLHLKH+ LT + Q+
Sbjct: 173 S-WDASNKFQPAFVAALPENDSSRELQSTLNELVLEFNEAMQALSDLHLKHRKLTEKYQN 231
Query: 233 RQDIDAKDKAKLNRLKGELESAVKELEECNCKLAALRAERDVTKGA--FFPVLNLGNKHV 290
++ ++ + KA+ RLK EL SAV ELEE N KLA L+ + D T+G FFP L GNK++
Sbjct: 232 QKYLNVQRKAEHIRLKEELASAVAELEESNHKLAVLKTQGDTTRGTPTFFPTL--GNKNM 289
Query: 291 AGDRVRDEQRDLRDMESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLKSVKCL 350
A D VRD+Q++L+D+E+ HK+ D S +L+E++ LH+ RI++L +L QNTL K +
Sbjct: 290 AEDNVRDKQKELQDLEACHKDFTDLVSQRLVEIRRLHEERIEILNKLATFQNTLTDCKSI 349
Query: 351 SSSKAFLSVKNQLEKSKSEVFKYQALFEKLQVEKDNLAWRETELNMKIDLVDVFRRSSAV 410
SS+AF +K+QL+KS++E+ + + L E LQV+KD L W+E E+N K+DL + R
Sbjct: 350 YSSQAFQVLKDQLQKSQAELDQCRTLLETLQVDKDKLIWQEREVNAKVDLAGISHRVYVN 409
Query: 411 TDSKIADLGIEIQKQIDEKNRIEMRLEEASREPGRKEIIAEFRALVSSFPEDMSAMQRQL 470
+S IA L ++K +DEKN + ++LEE+SR PGRK+II+EF+ALVSS P +M AMQ +L
Sbjct: 410 CESSIAVLEQNLRKVVDEKNMLLLKLEESSRGPGRKQIISEFKALVSSLPREMGAMQNEL 469
Query: 471 SKYKEAALDIHILRADVLSLTNVLERKVKECETLLASSADQVAEIHKLQAMVQDLTDSNL 530
KYK+ A ++H LRA+V SL++VL RK LL SA +EI L++ V +L +N
Sbjct: 470 CKYKDDASELHCLRAEVHSLSDVLTRKENAINELLCRSARAGSEIRDLRSTVCELRQTNC 529
Query: 531 ELKLILDMYRRESTDSRFVNLLEY 554
ELKL L+M++ ESTDSR ++LE+
Sbjct: 530 ELKLFLEMFKHESTDSR--DVLEF 551
>gi|413934753|gb|AFW69304.1| hypothetical protein ZEAMMB73_938449 [Zea mays]
Length = 851
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 212/515 (41%), Positives = 328/515 (63%), Gaps = 13/515 (2%)
Query: 36 KKIDTAVLQFQNQKLVQKLETQKVEYSALENKFAQLKERQQPYDSTLKVVNKSWEELITD 95
+ +D AVL+++NQKL ++LE K E+ ALE++F LKE+Q+ ++ TL +V WE LI D
Sbjct: 17 RPLDFAVLKYKNQKLAEQLEVHKFEFCALESRFNDLKEKQRTHNKTLVLVKSYWERLIAD 76
Query: 96 LESCSMRARESSNGQESRCLSIIEDVTPHPSHDAFLSRLMETGATESSSADNCPNQMEED 155
L S+ ESS S C + ++ FL+ L+E GATESS + NC Q+ D
Sbjct: 77 LGIVSVCKNESSR---SSCSTGNNNIRKD-----FLNGLLEAGATESSGSPNC--QLGND 126
Query: 156 RETGIPRTKNIVSNILAAVDNLWHLKGGLYAAVLKDL-QDGGSKQ--KASSNLQSEVKNL 212
+ T +I+ + WH+ +A L L ++ S+Q A+S++ S++ +
Sbjct: 127 VSSEQSTTIDILQKLFLPSSGPWHVNNEFVSAALMKLPENEHSRQLHNATSDVLSKLHVV 186
Query: 213 RLALMDLHLKHKSLTRELQSRQDIDAKDKAKLNRLKGELESAVKELEECNCKLAALRAER 272
+ +LHLKH+ L Q ++D A ++A+ RLK EL S V +LE KLA L+A+
Sbjct: 187 MRTVDNLHLKHRQLAANYQKQRDSSAWNRAEQKRLKEELTSVVAKLEGSKQKLAVLKAQG 246
Query: 273 DVTKGAFFPVLNLGNKHVAGDRVRDEQRDLRDMESVHKELMDQASHQLLELKGLHDGRIK 332
D + V LGNK++ ++VRD+Q +L+D+E+ HKELM+ S +L E++ LH RI+
Sbjct: 247 DNKQATPILVPTLGNKNMTAEKVRDKQTELQDLEATHKELMELISKRLEEIRRLHTERIE 306
Query: 333 VLQQLYNLQNTLKSVKCLSSSKAFLSVKNQLEKSKSEVFKYQALFEKLQVEKDNLAWRET 392
+L +L QN L K + SSKAF V +QL+KS++E+ +Q L EKLQVE D WRE
Sbjct: 307 ILNKLATFQNILTDFKSIHSSKAFQLVNDQLQKSQAELDDHQTLLEKLQVEMDTFVWRER 366
Query: 393 ELNMKIDLVDVFRRSSAVTDSKIADLGIEIQKQIDEKNRIEMRLEEASREPGRKEIIAEF 452
+ N K+DL ++ ++ SA S+IADL ++QK +EKN + ++LEEASREPGR ++I+EF
Sbjct: 367 QFNQKVDLAEIPQKVSAYCVSRIADLEKDVQKLCNEKNMLVLKLEEASREPGRNQVISEF 426
Query: 453 RALVSSFPEDMSAMQRQLSKYKEAALDIHILRADVLSLTNVLERKVKECETLLASSADQV 512
+ALVSS P +M A+Q +LSK+K+A+L +H LRA+V SL+++ RK +E E + SA
Sbjct: 427 KALVSSLPREMGAVQSELSKHKDASLQLHSLRAEVHSLSSIQTRKEQEIEEMSFRSAHAG 486
Query: 513 AEIHKLQAMVQDLTDSNLELKLILDMYRRESTDSR 547
++I +LQ++V++L ++ ELKL +++Y+ ESTDSR
Sbjct: 487 SDISQLQSLVRELRENTQELKLFVELYKHESTDSR 521
>gi|115459778|ref|NP_001053489.1| Os04g0550400 [Oryza sativa Japonica Group]
gi|113565060|dbj|BAF15403.1| Os04g0550400, partial [Oryza sativa Japonica Group]
Length = 489
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 211/489 (43%), Positives = 312/489 (63%), Gaps = 11/489 (2%)
Query: 15 SSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEYSALENKFAQLKER 74
+ +SP AK+ P+SE+KK+D VL+++NQKL ++LE K EY ALENKFA LKE+
Sbjct: 2 APVSP----AKRLAVAPTSEDKKLDFTVLKYKNQKLSEQLEAHKFEYRALENKFAGLKEK 57
Query: 75 QQPYDSTLKVVNKSWEELITDLESCSM-RARESSNGQESRCLSIIEDVTPHPSHDAFLSR 133
Q+ ++ TL +VN SWE+L+ DL+S S ++ ++ S ++ +D T P L
Sbjct: 58 QRTHNETLSLVNSSWEQLVADLKSRSFCKSGSPNSSPGSGHNNVQKDGTCAPIERDTLRS 117
Query: 134 LMETGATESSSA-DNCPNQMEEDRETGIPRTKNIVSNILAAVDNLWHLKGGLYAAVLKDL 192
L+E+GATESS C + D T N + +I +L A L L
Sbjct: 118 LVESGATESSGCLPGC--HLGSDAPPLHLSTANALGDIFFPSSDLLQANEECALAALTKL 175
Query: 193 -QDGGSKQKASSNLQSEVKNLRL--ALMDLHLKHKSLTRELQSRQDIDAKDKAKLNRLKG 249
++ SKQ S++ + AL +L LKHK L + Q+++D A+ +A+ RLK
Sbjct: 176 PENDRSKQLQSTSSNLLSSLNNVVQALSNLQLKHKQLAEDYQNQRDSSARKRAEHRRLKE 235
Query: 250 ELESAVKELEECNCKLAALRAERDVTKGAFFPVLNLGNKHVAGDRVRDEQRDLRDMESVH 309
EL SA ELEE N KLAAL+A+RD T+GA P LGNK++ D+VRD+QR+++D+E+ H
Sbjct: 236 ELASAASELEETNYKLAALKAQRDNTQGARIPYPTLGNKNMPEDKVRDKQREMQDLEATH 295
Query: 310 KELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLKSVKCLSSSKAFLSVKNQLEKSKSE 369
KEL + S +L+E+K LH+ RI++L ++ QN L K + SSKAF V ++L+KS++E
Sbjct: 296 KELSELISKRLVEIKRLHEERIEILNKIATFQNILMDFKSIRSSKAFQLVNDRLQKSQAE 355
Query: 370 VFKYQALFEKLQVEKDNLAWRETELNMKIDLVDVFRRSSAVTDSKIADLGIEIQKQIDEK 429
+ YQ L EKLQV+KD W+E + N+K+DL ++ R S +S IADL +IQK DEK
Sbjct: 356 LDHYQTLLEKLQVDKDKFVWQERQFNLKVDLAEIPERVSTYCESSIADLKKDIQKLCDEK 415
Query: 430 NRIEMRLEEASREPGRKEIIAEFRALVSSFPEDMSAMQRQLSKYKEAALDIHILRADVLS 489
N + ++LEEASREPGR ++I +F+ALVSS P +M AMQ +++K+KEA+L+++ LRA+V S
Sbjct: 416 NMLILKLEEASREPGRNQVITKFKALVSSIPREMGAMQSEMTKHKEASLELNSLRAEVHS 475
Query: 490 LTNVLERKV 498
L+ +L RK
Sbjct: 476 LSRILSRKA 484
>gi|147797403|emb|CAN69177.1| hypothetical protein VITISV_024408 [Vitis vinifera]
Length = 864
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 174/276 (63%), Positives = 210/276 (76%), Gaps = 28/276 (10%)
Query: 247 LKGELESAVKELEECNCKLAALRAERDVTKGAFFPVLNLGNKHVAGDRVRDEQRDLRDME 306
+ GELES V ELEE NCKL L+AERD KGAFFP+L+LG+K+VAGD+ RD+Q+DL DME
Sbjct: 381 VNGELESTVAELEESNCKLVTLKAERDAAKGAFFPILSLGSKNVAGDKARDKQKDLHDME 440
Query: 307 SVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLKSVKCLSSSKAFLSVKNQLEKS 366
+ KEL+ NTLK+VKC+SSS A++ V +QLEKS
Sbjct: 441 ATLKELL----------------------------NTLKNVKCISSSSAYVLVTDQLEKS 472
Query: 367 KSEVFKYQALFEKLQVEKDNLAWRETELNMKIDLVDVFRRSSAVTDSKIADLGIEIQKQI 426
K+EV YQALFEKLQVEKDNL WRE E+NMK D VDVFRRSS VTDS++++L IEIQ QI
Sbjct: 473 KAEVVHYQALFEKLQVEKDNLVWREKEVNMKNDFVDVFRRSSVVTDSRLSELRIEIQNQI 532
Query: 427 DEKNRIEMRLEEASREPGRKEIIAEFRALVSSFPEDMSAMQRQLSKYKEAALDIHILRAD 486
+E+N IE++LEEASREPGRKEIIAEF+AL+SSFP++M MQ QL KYKEAA D+H LRAD
Sbjct: 533 NERNLIEIKLEEASREPGRKEIIAEFKALLSSFPDNMGTMQNQLRKYKEAASDVHSLRAD 592
Query: 487 VLSLTNVLERKVKECETLLASSADQVAEIHKLQAMV 522
V SL++VLERK KE ETL SADQVA+I KLQA++
Sbjct: 593 VQSLSSVLERKEKELETLSTRSADQVADIRKLQALM 628
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 157/250 (62%), Positives = 199/250 (79%), Gaps = 3/250 (1%)
Query: 1 MGSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVE 60
MGSTGEPDRKRRHFSS+SPTAATAKK PF P SE+KK+DTAVLQ+QNQKL QKLE QKVE
Sbjct: 1 MGSTGEPDRKRRHFSSLSPTAATAKKMPFLPVSEDKKLDTAVLQYQNQKLKQKLEAQKVE 60
Query: 61 YSALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARES-SNGQESRCLSIIE 119
SALENKF+QLKE QQ Y++TL +VNK+W EL+ +LE+CS+ ++S S G+ + S E
Sbjct: 61 CSALENKFSQLKETQQSYNTTLTLVNKTWRELVDNLETCSVHLKDSASAGRHVKLPSTTE 120
Query: 120 DVTPHPSHDAFLSRLMETGATESSSADNCPNQMEEDRETGIPRTKNIVSNILAAVDNLWH 179
D DAFLSRL+ETGATES SA++ ++MEEDR T +TKN +SNI++ +++LW
Sbjct: 121 D-GNSCLQDAFLSRLIETGATESCSANDFSDRMEEDRPTSCGKTKNSLSNIVSTINDLWC 179
Query: 180 LKGGLYAAVLKDL-QDGGSKQKASSNLQSEVKNLRLALMDLHLKHKSLTRELQSRQDIDA 238
LK GLYAAVL+ L +DG +K SS+L +EV N+RLA DLHLKHKS+TR++QS +DIDA
Sbjct: 180 LKDGLYAAVLEALPEDGLCNKKISSDLHAEVNNMRLAFGDLHLKHKSVTRDMQSHRDIDA 239
Query: 239 KDKAKLNRLK 248
K+KA+L RL+
Sbjct: 240 KNKAELKRLR 249
Score = 39.3 bits (90), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 23/27 (85%)
Query: 522 VQDLTDSNLELKLILDMYRRESTDSRF 548
+QDL +S+++LKLIL+MYR ES DSR
Sbjct: 701 IQDLEESDIQLKLILEMYRCESVDSRL 727
>gi|38605849|emb|CAD41603.3| OSJNBb0034G17.7 [Oryza sativa Japonica Group]
Length = 883
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 218/556 (39%), Positives = 317/556 (57%), Gaps = 63/556 (11%)
Query: 1 MGSTGEPDRKRRHFSSISPTAAT----AKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLET 56
MGSTGEPDRKRR SS++P AK+ P+SE+KK+D VL+++NQKL ++LE
Sbjct: 1 MGSTGEPDRKRRLSSSVAPGGGAPVSPAKRLAVAPTSEDKKLDFTVLKYKNQKLSEQLEA 60
Query: 57 QKVEYSALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSM-RARESSNGQESRCL 115
K EY ALENKFA LKE+Q+ ++ TL +VN SWE+L+ DL+S S ++ ++ S
Sbjct: 61 HKFEYRALENKFAGLKEKQRTHNETLSLVNSSWEQLVADLKSRSFCKSGSPNSSPGSGHN 120
Query: 116 SIIEDVTPHPSHDAFLSRLMETGATESSSA-DNCPNQMEEDRETGIPRTKNIVSNILAAV 174
++ +D T P L L+E+GATESS C + D T N + +I
Sbjct: 121 NVQKDGTCAPIERDTLRSLVESGATESSGCLPGC--HLGSDAPPLHLSTANALGDIFFPS 178
Query: 175 DNLWHLKGGLYAAVLKDL-QDGGSKQKASSNLQSEVKNLRL--ALMDLHLKHKSLTRELQ 231
+L A L L ++ SKQ S++ + AL +L LKHK L + Q
Sbjct: 179 SDLLQANEECALAALTKLPENDRSKQLQSTSSNLLSSLNNVVQALSNLQLKHKQLAEDYQ 238
Query: 232 SRQDIDAKDKAKLNRLKGELESAVKELEECNCKLAALRAERDVTKGAFFPVLNLGNKHVA 291
+++D A+ +A+ RLK EL SA ELEE N KLAAL+A+RD T+GA P LGNK++
Sbjct: 239 NQRDSSARKRAEHRRLKEELASAASELEETNYKLAALKAQRDNTQGARIPYPTLGNKNMP 298
Query: 292 GDRVRDEQRDLRDMESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLKSVKCLS 351
D KEL+ S +L+E+K LH+ RI++L ++ QN L K +
Sbjct: 299 ED----------------KELI---SKRLVEIKRLHEERIEILNKIATFQNILMDFKSIR 339
Query: 352 SSKAFLSVKNQLEKSKSEVFKYQALFEKLQVEKDNLAWRETELNMKIDLVDVFRRSSAVT 411
SSKAF V ++L+KS++E+ YQ L EKLQV+KD W+E + N+K+DL ++ R S
Sbjct: 340 SSKAFQLVNDRLQKSQAELDHYQTLLEKLQVDKDKFVWQERQFNLKVDLAEIPERVSTYC 399
Query: 412 DSKIADLGIEIQKQIDEKNRIEMRLEEASREPGRKEIIAEFRALVSSFPEDMSAMQRQLS 471
R ++I +F+ALVSS P +M AMQ +++
Sbjct: 400 ---------------------------------RNQVITKFKALVSSIPREMGAMQSEMT 426
Query: 472 KYKEAALDIHILRADVLSLTNVLERKVKECETLLASSADQVAEIHKLQAMVQDLTDSNLE 531
K+KEA+L+++ LRA+V SL+ +L RK ++ E SA ++I +LQ+++ DL +N E
Sbjct: 427 KHKEASLELNSLRAEVHSLSRILSRKERDNEEASCRSARAGSDITQLQSVISDLKQTNKE 486
Query: 532 LKLILDMYRRESTDSR 547
LKL DMY+RESTDSR
Sbjct: 487 LKLFADMYKRESTDSR 502
>gi|413943251|gb|AFW75900.1| hypothetical protein ZEAMMB73_783373 [Zea mays]
Length = 1025
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 197/553 (35%), Positives = 301/553 (54%), Gaps = 75/553 (13%)
Query: 20 TAATAKKNPFFPS--SEEKKIDTAVLQFQNQKLVQKLETQKVEYSALENKFAQLKERQQP 77
T +KN P + + +D AVL ++NQ+L ++LE K E+ ALE++F LKE+Q+
Sbjct: 113 TKGARRKNALDPRNIAMSRPLDFAVLNYKNQRLAEQLEVHKFEFRALESRFNDLKEKQRT 172
Query: 78 YDSTLKVVNKSWEELITDLESCSMRARESSNGQESRCLS---------IIED-----VTP 123
++ TL +V WE + L CS R + + C+S I++ + P
Sbjct: 173 HNETLILVENYWERVFVVL--CSFR-NYIYDDKRFTCISPELAVYQLMIVKGQALCRMLP 229
Query: 124 HPSHD-------AFLSRLMETGA--TESSSADNCPNQMEEDRETGIPRTKNIVSNILAAV 174
H FL+ L+E GA TESS NC Q+ D + T +I+ +
Sbjct: 230 HKWDGICFRLGAGFLNGLLEAGASATESSGFSNC--QLGNDVSSEESTTIDILQKMFLPS 287
Query: 175 DNLWHLKGGLYAAVLKDLQDGGSKQKASSNLQSEVKNLRLALMDLHLKHKSLTRELQSRQ 234
WH L G+ QK ++
Sbjct: 288 SGPWHANNEL----------AGNYQK--------------------------------QR 305
Query: 235 DIDAKDKAKLNRLKGELESAVKELEECNCKLAALRAERDVTKGAFFPVLNLGNKHVAGDR 294
D A ++A+ RLK EL S V +LEE KLA L+A+ D + V LG K ++
Sbjct: 306 DSSAWNRAEQKRLKEELTSVVAKLEESKQKLAVLKAQGDNKQATPILVPMLGKK--TAEK 363
Query: 295 VRDEQRDLRDMESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLKSVKCLSSSK 354
V D+Q +L+D+E+ HKELM+ S +L E++ LH RI +L L QN L K + SSK
Sbjct: 364 VGDKQTELQDLEATHKELMESISKRLEEIRRLHTERIGILNNLATFQNILTDFKSIHSSK 423
Query: 355 AFLSVKNQLEKSKSEVFKYQALFEKLQVEKDNLAWRETELNMKIDLVDVFRRSSAVTDSK 414
AF V +QL+KS++E+ +Q L EKLQV+ D WRE + N K+DL ++ ++ SA S+
Sbjct: 424 AFQLVNDQLQKSQAELDGHQTLLEKLQVDMDTFVWRERQFNQKVDLAEISQKVSAYYVSR 483
Query: 415 IADLGIEIQKQIDEKNRIEMRLEEASREPGRKEIIAEFRALVSSFPEDMSAMQRQLSKYK 474
IADL ++QK +EKN + ++LE A REPGR ++I+EF+ALVSS P +M A+Q +LSK+K
Sbjct: 484 IADLEKDVQKLCNEKNMLVLKLEGALREPGRNQVISEFKALVSSLPREMGAVQTELSKHK 543
Query: 475 EAALDIHILRADVLSLTNVLERKVKECETLLASSADQVAEIHKLQAMVQDLTDSNLELKL 534
+A+L +H LRA+V SL+++ RK +E E + SA ++I +LQ++V +L ++ ELKL
Sbjct: 544 DASLQLHSLRAEVHSLSSIRTRKEQEIEE-TSRSAHAGSDISQLQSLVHELRENTQELKL 602
Query: 535 ILDMYRRESTDSR 547
+++Y+ +S DSR
Sbjct: 603 FVELYKHDSADSR 615
>gi|302811130|ref|XP_002987255.1| hypothetical protein SELMODRAFT_446901 [Selaginella moellendorffii]
gi|300145152|gb|EFJ11831.1| hypothetical protein SELMODRAFT_446901 [Selaginella moellendorffii]
Length = 877
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 198/570 (34%), Positives = 317/570 (55%), Gaps = 38/570 (6%)
Query: 1 MGSTGEPDRKRRH---FSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQ 57
MGST E +RKRRH +S+SP K+ P P EE+K D +LQ+QNQ+L QKL+ Q
Sbjct: 1 MGSTEESERKRRHSNNHTSLSPPPK--KQQPMAPVLEERKADPGMLQYQNQQLAQKLDAQ 58
Query: 58 KVEYSALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSNGQESRCLSI 117
+ E ALE+KF QLK +Q +D TL VN+ W+EL+ DLE ++ A + + +
Sbjct: 59 RSEIHALEDKFNQLKSKQTSFDETLISVNRCWKELVDDLELLAVNAHPDGTTE----VPV 114
Query: 118 IEDVTPHPSHD-----------AFLSRLMETGA-TESSSADNCPNQMEEDRETGIPRTKN 165
+E V P S D FL RL+ + A TE + D N R +T +
Sbjct: 115 LE-VAPPVSSDKPDTSSVIPEETFLQRLVRSSASTEGDTLDAALN----SRRASTVKTMS 169
Query: 166 IVSNIL----AAVDNLWH-LKGGLYAAVLKDLQDGGSKQKASSNLQSEVKNLRLALMDLH 220
+ ++ A D L LK L + V G + QKA +L E ++LR A+ LH
Sbjct: 170 YIVQVIQSQRAKHDELTSMLKNQLSSDVA-----GKALQKAHDDLLVETQSLRTAMEALH 224
Query: 221 LKHKSLTRELQSRQDIDAKDKAKLNRLKGELESAVKELEECNCKLAA-LRAERDVTKGAF 279
LKHK ++ + + +D KD+A++ RL GELE + EL+ KLAA LR ++D+ G
Sbjct: 225 LKHKEISSAMTAMEDSRLKDRAEIGRLTGELEDTLAELDTSRRKLAAALRNQKDLPPGPP 284
Query: 280 FPVLNLGNKHVAGDRVRDEQRDLRDMESVHKELMDQASHQLLELKGLHDGRIKVLQQLYN 339
P G V +D+RD+E + + + +L++L+ H + + +QL
Sbjct: 285 TPGAVTKEPGEKGG-VYKTSKDIRDLEELLERTKALSECRLVDLQEAHQKNLNLAEQLRR 343
Query: 340 LQNTLKSVKCLSSSKAFLSVKNQLEKSKSEVFKYQALFEKLQVEKDNLAWRETELNMKID 399
LQ++ + + SS+ +L +++QL+ K+E+ + QA E+ Q E+D+ E E+++K +
Sbjct: 344 LQDSHIDEQRVISSRPYLLLQDQLKFFKAELDRCQANAERFQAERDSALRHEKEVSLKAE 403
Query: 400 LVDVFRRSSAVTDSKIADLGIEIQKQIDEKNRIEMRLEEASREPGRKEIIAEFRALVSSF 459
+ RR AV +S+I L ++Q+ + +++ +++R+EE ++ GRK+ +AE + ++S+
Sbjct: 404 AGEAARRDVAVAESRITALEAKLQQCMADRDDLQLRVEELNQLSGRKDTVAELKLMISTL 463
Query: 460 PEDMSAMQRQLSKYKEAALDIHILRADVLSLTNVLERKVKECETLLASSADQVAEIHKLQ 519
++M MQ QL+KYK+AA ++ LRAD S+ VLERK E + L ADQ E +
Sbjct: 464 HKEMGMMQLQLNKYKDAAHEVCSLRADSHSMAAVLERKKFEFKNLSKKLADQAIEADVFK 523
Query: 520 AMVQDLTDSNLELKLILDMYRRESTDSRFV 549
++ L +S ELKLILDMY +ES +SR +
Sbjct: 524 EEIRVLKESEQELKLILDMYEKESIESRDI 553
>gi|168003850|ref|XP_001754625.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694246|gb|EDQ80595.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 884
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 187/562 (33%), Positives = 301/562 (53%), Gaps = 25/562 (4%)
Query: 1 MGSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVE 60
MGST EPDRKRRH + + KK P PSSEEKK+D +LQFQN KL Q+L Q+ E
Sbjct: 1 MGSTEEPDRKRRHLNKDHLASPPVKKQPHTPSSEEKKVDAQMLQFQNHKLAQQLYVQRNE 60
Query: 61 YSALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSNGQESRCLSIIED 120
+ LE K QL Q +D L V++ W +++ DLES ++R SSNG ++E
Sbjct: 61 INVLEGKLNQLLSNQASFDDNLSKVSRVWNQVVDDLESLTVRYSSSSNG-----TYLLEP 115
Query: 121 VTPH------PSHDAFLSRLMETGATESSSADNCPNQMEEDRETGIPRTKNIVSNILAAV 174
+ S FL R ++ GAT SS+ + + ++ + T I+ ++ ++
Sbjct: 116 ASNDRNNSSVSSEQTFLQRFLDNGATGSSTTNGSNDFVKSGLCSQQTSTAEILKLLVQSI 175
Query: 175 DNLWHLKGGLYAAVLKDLQDGGSK----QKASSNLQSEVKNLRLALMDLHLKHKSLTREL 230
D L + L + K L +E K LR + HLKH+ L+ EL
Sbjct: 176 DYEQVRNEELLSTFLNGIASNAVNLLPLVKEDEELYAETKKLRSLVDGFHLKHRELSAEL 235
Query: 231 QSRQDIDAKDKAKLNRLKGELESAVKELEECNCKLAALRAERDVTKGAFFPVLNL-GNKH 289
+ D AKD+A+L RLK ELE A +LE +LAALR+E + G P L NK
Sbjct: 236 GTCHDFQAKDRAELKRLKDELEEACADLEGVRHQLAALRSENVILSGPPTPSATLTSNKF 295
Query: 290 VAGDRVRDEQR---DLRDMESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLKS 346
GD +++ + +E+ +E+ A+ +L+EL+ + V+++ ++QN L
Sbjct: 296 EFGDGGASQEKVSKECCQLEADLEEVKTLAARRLMELQEALQNHLDVIKKFQHMQNELDD 355
Query: 347 VKCLSSSKAFLSVKNQLEKSKSEVFKYQALFEKLQVEKDNLAWRETELNMKIDLVDVFRR 406
+ + SS+ + S+ Q++ +SEV +Y+A+ ++LQ E +L RE E+ +K + D ++
Sbjct: 356 QERIVSSRQYQSLTEQVQHLRSEVERYRAMVDQLQGEHVSLLRREKEIALKTEAGDAAQK 415
Query: 407 SSAVTDSKIADLGIEIQKQIDEKNRIEMRLEEASREPGRKEIIAEFRALVSSFPEDMSAM 466
+S +D + A L +++++ + + + + +R+E A+ G KE +A+ +++S +DMS M
Sbjct: 416 ASTTSDDRAAALELKLRQCMSDCDSLRLRVEGATHASGVKESVADLEKVITSLHKDMSMM 475
Query: 467 QRQLSKYKEAALDIHILRADVLSLTNVLERKVKE--CETLLASSADQVAEIHKLQAMVQD 524
Q QL +YKEA + LRA++ SL +++RKV + C+T SA + I +
Sbjct: 476 QAQLFEYKEAGSAVFSLRAELHSLRAIIDRKVSKHFCDT----SAKRSTRISVCNLQFRV 531
Query: 525 LTDSNLELKLILDMYRRESTDS 546
L S ELKLI DMY +ES DS
Sbjct: 532 LRGSEKELKLIFDMYNKESNDS 553
>gi|168049341|ref|XP_001777122.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671565|gb|EDQ58115.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 884
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 189/565 (33%), Positives = 307/565 (54%), Gaps = 19/565 (3%)
Query: 1 MGSTGEPDRKRRHFS-SISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKV 59
MGST + DRKRR+F+ S+SP K PSSE+KK+D +L +QN KL Q LE Q+
Sbjct: 1 MGSTEDSDRKRRNFNHSVSPVVM---KQSLTPSSEKKKVDAQMLHYQNSKLSQLLEVQRN 57
Query: 60 EYSALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSNGQESRCLSIIE 119
E + LE K QL +Q +D L +V++ W++++ DLE ++R +SNG +
Sbjct: 58 EINVLEGKLNQLHNKQVSFDENLSIVSRVWDQVVDDLELLTVRVGPTSNGTHALGSPHDR 117
Query: 120 DVTPHPSHDAFLSRLMETGATESSSADNCPNQMEE---DRETGIPRTKNIVSNILAAVDN 176
D FL RL++ GAT++S+ + +E R+ I T V+ ++ ++D
Sbjct: 118 DNASFRPEQTFLQRLLDRGATDNSTINRSNGSVESGLFSRKADIAMT---VTYLVQSIDY 174
Query: 177 LWHLKGGLYAAVLKDLQD---GGSKQKASSNLQSEVKNLRLALMDLHLKHKSLTRELQSR 233
L +++ D+ GS KA L +E K +R + DLHLKH+ L+ EL +
Sbjct: 175 ERARNDELVSSLRNDIASIGVNGSLAKADEELYAEAKKVRGFVEDLHLKHRQLSAELGTC 234
Query: 234 QDIDAKDKAKLNRLKGELESAVKELEECNCKLAALRAERDVTKGAFFPVLNLGNKHVAGD 293
D AKD+A++ RLKGELE +LE +L A R++ G+ P K
Sbjct: 235 GDFQAKDQAEVKRLKGELEEVCADLEANRRQLTAFRSQDATLSGSATPSATPTRKMFEVR 294
Query: 294 RVRDEQRDLRD----MESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLKSVKC 349
EQ + +E+ +E A+ L EL+ + ++++ +Q S+
Sbjct: 295 EGDAEQGKFPEENCELETGLEEAKSLAARSLTELQEAMHNHLDDIRKIQQMQVRFASIFI 354
Query: 350 LSSSKAFLSVKNQLEKSKSEVFKYQALFEKLQVEKDNLAWRETELNMKIDLVDVFRRSSA 409
+S + + S+ Q++ ++EV KY+A+ ++LQVE+ +L +E E+ +K + D RR+ A
Sbjct: 355 ISF-RQYQSLDEQVQYLRTEVEKYRAVVDELQVERVSLVRQEKEVILKAEAGDAARRAGA 413
Query: 410 VTDSKIADLGIEIQKQIDEKNRIEMRLEEASREPGRKEIIAEFRALVSSFPEDMSAMQRQ 469
++D++ ADL +++Q+ + + + + +R+E+A+R G KE +A+ + ++ EDM+ +Q Q
Sbjct: 414 ISDARAADLELKLQQCMSDCDTMRLRIEDATRASGVKESVADLKKESTNLHEDMNMIQTQ 473
Query: 470 LSKYKEAALDIHILRADVLSLTNVLERKVKECETLLASSADQVAEIHKLQAMVQ-DLTDS 528
L +KE +H LRA + SL +LERK E L A QV E++ +Q V L DS
Sbjct: 474 LDDFKETGSAVHSLRAKLHSLHLILERKTLESRLLSDQYAGQVRELNFIQDEVCLGLRDS 533
Query: 529 NLELKLILDMYRRESTDSRFVNLLE 553
ELKLILDMY RE +D R V L+
Sbjct: 534 EKELKLILDMYDRELSDPREVRELQ 558
>gi|168052472|ref|XP_001778674.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669992|gb|EDQ56569.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 844
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 174/524 (33%), Positives = 294/524 (56%), Gaps = 16/524 (3%)
Query: 42 VLQFQNQKLVQKLETQKVEYSALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSM 101
+LQ+QN KL Q+LE Q+ E + LE + QL +Q +D L +V++ W +++ DLE ++
Sbjct: 1 MLQYQNHKLSQQLEVQRNEITVLEGRLKQLHSKQALFDENLSIVSRVWNQVVDDLELLTV 60
Query: 102 RARESSNG-QESRCLSI-IEDVTPHPSHDAFLSRLMETGATESSSADNCPNQMEEDRETG 159
RA ++NG Q S +S D + P+ FL RL++TGATESS + +E +
Sbjct: 61 RANTTTNGIQVSGSVSKDRNDASVLPAQ-TFLQRLLDTGATESSIINGSNGSIESGHSSR 119
Query: 160 IPRTKNIVSNILAAVDNLWHLKGGLYAAVLKDLQDGGSKQ---KASSNLQSEVKNLRLAL 216
T + +I+ ++D L + + G + KA+ L E K LR +
Sbjct: 120 EATTYKTMKDIVQSIDYERARNEDLVSNFRNGIASNGVNRSLVKANEELYVEAKKLRGLV 179
Query: 217 MDLHLKHKSLTRELQSRQDIDAKDKAKLNRLKGELESAVKELEECNCKLAALRAERDVTK 276
DLH+KH+ L+ EL + +D+ AKD+A+L RLKGELE A +LE +LAALR++ +
Sbjct: 180 DDLHVKHRELSAELGTCRDLQAKDQAELKRLKGELEEACADLESNRRQLAALRSQDAMLS 239
Query: 277 GAFFP-------VLNLGNKHVAGDRVRDEQRDLRDMESVHKELMDQASHQLLELKGLHDG 329
G P G +V E +L E+ +E A+ +L EL+ +
Sbjct: 240 GPPTPSATPTRKTFEFGEGGAGQVKVSKENCEL---EAGLEEAKTLAARRLTELEEAMNN 296
Query: 330 RIKVLQQLYNLQNTLKSVKCLSSSKAFLSVKNQLEKSKSEVFKYQALFEKLQVEKDNLAW 389
++ V+Q++ +LQ+ L + + +S+ + S+ +++ + EV K+QA+ ++LQ E+ +L
Sbjct: 297 QLDVIQKIQHLQDELDDQESIMTSRQYQSLHEKVQYLRGEVEKHQAMVDELQGERISLLR 356
Query: 390 RETELNMKIDLVDVFRRSSAVTDSKIADLGIEIQKQIDEKNRIEMRLEEASREPGRKEII 449
RE E +K + D RR+ ++D++ DL +++Q+ + + + +++R+ +A++ RKE +
Sbjct: 357 REKEAILKAEAGDAARRACILSDARADDLELKLQQCMSDCDTLQLRVTDAAQASARKESV 416
Query: 450 AEFRALVSSFPEDMSAMQRQLSKYKEAALDIHILRADVLSLTNVLERKVKECETLLASSA 509
A+ + ++S+ ED++ MQ QL +KE +H LRA + SL LERK KE L
Sbjct: 417 ADLKEVISNLDEDIAMMQGQLYDFKETGSAVHSLRAQLHSLHAKLERKSKESRELSDQHL 476
Query: 510 DQVAEIHKLQAMVQDLTDSNLELKLILDMYRRESTDSRFVNLLE 553
QV E++ +Q ++ L DS ELKLIL+MY +ESTD R V L+
Sbjct: 477 GQVPELNSIQNEIRGLQDSEKELKLILNMYNKESTDPREVRELQ 520
>gi|297746431|emb|CBI16487.3| unnamed protein product [Vitis vinifera]
Length = 879
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 183/563 (32%), Positives = 301/563 (53%), Gaps = 36/563 (6%)
Query: 3 STGEPDRKRRHFSSIS-PTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
S+ EP++KR H +++S P A + +P + + +D LQ+QNQKLVQ+LE QK E
Sbjct: 6 SSEEPEKKRPHLNTLSSPMARNSSVSP-----DNRSVDATYLQYQNQKLVQQLEVQKHEL 60
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSNG-------QESRC 114
LE+K +LK+RQ YD L +N+ W +L+ DL +RA N SR
Sbjct: 61 HDLEDKIKELKDRQTSYDDMLITMNQLWSQLVDDLILLGVRAGGGQNAIQTLDHADHSRG 120
Query: 115 LSIIEDVTPHPSHDAFLSRLMETGATESSSADNCPNQMEEDRETGIPRTKNIVSNILAAV 174
L + P+ + FL RL+ET + ES+ D +EE T ++ ++ +
Sbjct: 121 L-----IPSCPAEEIFLCRLLETDSVESNGNDGIVKYVEEALALRHSSTLELIKSLEDTI 175
Query: 175 D-------NLWH-LKGGLYA--AVLKDLQDGGSKQKASSNLQSEVKNLRLALMDLHLKHK 224
D N+ L G L A A+++ K ++ E NLR + LHLKHK
Sbjct: 176 DAQRVKTENIAQALHGKLSAEDAIIQ-------LSKIDDLMKEEANNLREVIDALHLKHK 228
Query: 225 SLTRELQSRQDIDAKDKAKLNRLKGELESAVKELEECNCKLAALRAERDVTKGAFFPVLN 284
+Q+ + D++++ RL GELE ++ ELEE KL L+ ++DV PV
Sbjct: 229 EYVDGIQTYVHSHSVDQSEIKRLAGELEESMAELEESRRKLVNLKMQKDVASVVHTPVQG 288
Query: 285 LGNKHVAGDRVRDEQRDLRDMESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTL 344
N ++ ++ D R+++ +E A+ +L EL + + + +QL +LQN L
Sbjct: 289 AVNGSLSPEKHADRTMGFRELKDSVEETKILAADRLSELHEAQEDNLILSKQLQDLQNEL 348
Query: 345 KSVKCLSSSKAFLSVKNQLEKSKSEVFKYQALFEKLQVEKDNLAWRETELNMKIDLVDVF 404
K K + SS+ + + +QL+ +E +Y+ L + LQ ++ + RE ELN K +L D
Sbjct: 349 KDDKYVYSSRPYTLLNDQLQHWNAEAERYKLLTDSLQADRAQVVRREKELNAKSELADAA 408
Query: 405 RRSSAVTDSKIADLGIEIQKQIDEKNRIEMRLEEASREPGRKEIIAEFRALVSSFPEDMS 464
RS DSKI +L +++QK + EKN +E++++EA ++ GRK+I AEF + S+ ++M
Sbjct: 409 -RSVIENDSKIEELELQLQKCLIEKNDLEVKMKEALQDSGRKDIKAEFHVMASALSKEMG 467
Query: 465 AMQRQLSKYKEAALDIHILRADVLSLTNVLERKVKECETLLASSADQVAEIHKLQAMVQD 524
M+ QL+++KE A + LR V SL +L +K E + L +Q+ EI L+A+++
Sbjct: 468 MMESQLNRWKETAHEALSLREQVQSLKALLNKKTNEQKCLADKCEEQMVEIKSLKALIEK 527
Query: 525 LTDSNLELKLILDMYRRESTDSR 547
L LEL++ +DM+ +ES D+R
Sbjct: 528 LQKGKLELQIFVDMHGQESYDNR 550
>gi|168016988|ref|XP_001761030.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687716|gb|EDQ74097.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 846
Score = 244 bits (623), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 182/531 (34%), Positives = 307/531 (57%), Gaps = 30/531 (5%)
Query: 42 VLQFQNQKLVQKLETQKVEYSALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSM 101
+LQFQNQKL Q+L+ Q+ E S+LEN+ QLK +Q YD TL VN++W L DLE ++
Sbjct: 1 MLQFQNQKLAQQLDHQRSEISSLENRCCQLKGKQASYDDTLITVNRTWNLLEDDLELLAV 60
Query: 102 RARESSNGQESRCLSIIEDVTPH-----PSHDAFLSRLMETGATESSSADNCPNQME-ED 155
RA ++NG L ++E V + P + FL RL++ GATESS NC +
Sbjct: 61 RANANTNG-----LRVLEPVPTNKGPAVPPEETFLQRLLDKGATESS---NCEGSISLSA 112
Query: 156 RETGIPR----TKNIVSNILAAVDNLWHLKGGLYAAVLKDL----QDGGSKQKASSNLQS 207
E G+ T + +L A++ K A L+++ + G ++++ L+
Sbjct: 113 VEAGLASRKAATMKTMKYLLLAIET-QRSKNDELAMSLQNIVSPHEAGRILEESNDELRM 171
Query: 208 EVKNLRLALMDLHLKHKSLTRELQSRQDIDAKDKAKLNRLKGELESAVKELEECNCKLAA 267
E+ N+R + L L HK ++ E+ +D+ KD++ + RL GELE +LE C KLA
Sbjct: 172 EITNIRGVMDLLQLNHKEMSAEIGIARDLQTKDQSDIKRLTGELEETAADLEMCRRKLAT 231
Query: 268 LRAERDVTKGAFFPVLN--LGNKHVAGDRVRDE---QRDLRDMESVHKELMDQASHQLLE 322
LR++++ A V LG K+ GDRV R+ R++E+ +E AS +L E
Sbjct: 232 LRSQKEAAAVAPPTVGTPKLGVKNEVGDRVPGADKASREARELEAALEETKTLASIRLNE 291
Query: 323 LKGLHDGRIKVLQQLYNLQNTLKSVKCLSSSKAFLSVKNQLEKSKSEVFKYQALFEKLQV 382
L+ ++ + Q+L ++++ L + SS+ +L + +Q + K EV +Y+ L +KLQ
Sbjct: 292 LQDALQTQLNLSQRLQHMKDALHDEHRILSSRPYLLLNDQAQFLKGEVERYRGLADKLQS 351
Query: 383 EKDNLAWRETELNMKIDLVDVFRRSSAVTDSKIADLGIEIQKQIDEKNRIEMRLEEASRE 442
++D ++ RE E+ +K + + R++SA+ D++ A++ ++Q+ + +++ ++ RLEE +
Sbjct: 352 DRDAMSRREKEVLLKAEAGEAARKASAIADARAAEIETKLQECLADRDVLQFRLEEVGQS 411
Query: 443 PGRKEIIAEFRALVSSFPEDMSAMQRQLSKYKEAALDIHILRADVLSLTNVLERKVKECE 502
GRK+ + E + ++S+ ++M MQ QL+K+KEAA ++ LRA++ SL +LERK EC
Sbjct: 412 SGRKDSVPELQVMISTLHKEMGMMQAQLNKFKEAACEVQSLRAEIHSLAGILERKTLECT 471
Query: 503 TLLASSADQVAEIHKLQAMVQDLTDSNLELKLILDMYRRESTDSRFVNLLE 553
L QVA++ L++ V+ L S+ EL+LIL+MY REST R N++E
Sbjct: 472 RLSDQYVSQVADLIALKSEVEILRQSDQELQLILEMYERESTGPR--NMME 520
>gi|359478442|ref|XP_002283417.2| PREDICTED: E3 ubiquitin-protein ligase BRE1-like 2-like [Vitis
vinifera]
Length = 872
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 181/562 (32%), Positives = 296/562 (52%), Gaps = 41/562 (7%)
Query: 3 STGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEYS 62
S+ EP++KR H +++S P + +D LQ+QNQKLVQ+LE QK E
Sbjct: 6 SSEEPEKKRPHLNTLSS-----------PMARNSSVDATYLQYQNQKLVQQLEVQKHELH 54
Query: 63 ALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSNG-------QESRCL 115
LE+K +LK+RQ YD L +N+ W +L+ DL +RA N SR L
Sbjct: 55 DLEDKIKELKDRQTSYDDMLITMNQLWSQLVDDLILLGVRAGGGQNAIQTLDHADHSRGL 114
Query: 116 SIIEDVTPHPSHDAFLSRLMETGATESSSADNCPNQMEEDRETGIPRTKNIVSNILAAVD 175
+ P+ + FL RL+ET + ES+ D +EE T ++ ++ +D
Sbjct: 115 -----IPSCPAEEIFLCRLLETDSVESNGNDGIVKYVEEALALRHSSTLELIKSLEDTID 169
Query: 176 -------NLWH-LKGGLYA--AVLKDLQDGGSKQKASSNLQSEVKNLRLALMDLHLKHKS 225
N+ L G L A A+++ K ++ E NLR + LHLKHK
Sbjct: 170 AQRVKTENIAQALHGKLSAEDAIIQ-------LSKIDDLMKEEANNLREVIDALHLKHKE 222
Query: 226 LTRELQSRQDIDAKDKAKLNRLKGELESAVKELEECNCKLAALRAERDVTKGAFFPVLNL 285
+Q+ + D++++ RL GELE ++ ELEE KL L+ ++DV PV
Sbjct: 223 YVDGIQTYVHSHSVDQSEIKRLAGELEESMAELEESRRKLVNLKMQKDVASVVHTPVQGA 282
Query: 286 GNKHVAGDRVRDEQRDLRDMESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLK 345
N ++ ++ D R+++ +E A+ +L EL + + + +QL +LQN LK
Sbjct: 283 VNGSLSPEKHADRTMGFRELKDSVEETKILAADRLSELHEAQEDNLILSKQLQDLQNELK 342
Query: 346 SVKCLSSSKAFLSVKNQLEKSKSEVFKYQALFEKLQVEKDNLAWRETELNMKIDLVDVFR 405
K + SS+ + + +QL+ +E +Y+ L + LQ ++ + RE ELN K +L D
Sbjct: 343 DDKYVYSSRPYTLLNDQLQHWNAEAERYKLLTDSLQADRAQVVRREKELNAKSELADAA- 401
Query: 406 RSSAVTDSKIADLGIEIQKQIDEKNRIEMRLEEASREPGRKEIIAEFRALVSSFPEDMSA 465
RS DSKI +L +++QK + EKN +E++++EA ++ GRK+I AEF + S+ ++M
Sbjct: 402 RSVIENDSKIEELELQLQKCLIEKNDLEVKMKEALQDSGRKDIKAEFHVMASALSKEMGM 461
Query: 466 MQRQLSKYKEAALDIHILRADVLSLTNVLERKVKECETLLASSADQVAEIHKLQAMVQDL 525
M+ QL+++KE A + LR V SL +L +K E + L +Q+ EI L+A+++ L
Sbjct: 462 MESQLNRWKETAHEALSLREQVQSLKALLNKKTNEQKCLADKCEEQMVEIKSLKALIEKL 521
Query: 526 TDSNLELKLILDMYRRESTDSR 547
LEL++ +DM+ +ES D+R
Sbjct: 522 QKGKLELQIFVDMHGQESYDNR 543
>gi|302789299|ref|XP_002976418.1| hypothetical protein SELMODRAFT_175555 [Selaginella moellendorffii]
gi|300156048|gb|EFJ22678.1| hypothetical protein SELMODRAFT_175555 [Selaginella moellendorffii]
Length = 834
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 175/520 (33%), Positives = 292/520 (56%), Gaps = 22/520 (4%)
Query: 42 VLQFQNQKLVQKLETQKVEYSALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSM 101
+LQ+QNQ+L QKL+ Q+ E ALE+KF QLK +Q +D TL VN+ W+EL+ DLE ++
Sbjct: 1 MLQYQNQQLAQKLDAQRSEIHALEDKFNQLKSKQTSFDETLISVNRCWKELVDDLELLAV 60
Query: 102 RARESSNGQ--ESRCLSIIE--DVTPHPSHDAFLSRLMETGA-TESSSADNCPNQMEEDR 156
A + +C S+ + D + + FL RL+ + A TE + D N R
Sbjct: 61 NAHPDGTTELPADKCRSVADKPDTSSVIPEETFLQRLVRSSASTEGDTLDAALN----SR 116
Query: 157 ETGIPRTKNIVSNIL----AAVDNLWH-LKGGLYAAVLKDLQDGGSKQKASSNLQSEVKN 211
+T + + ++ A D L LK L + V G + QKA +L E ++
Sbjct: 117 RASTVKTMSYIVQVIQSQRAKHDELTSMLKNQLSSDVA-----GKALQKAHDDLLVETQS 171
Query: 212 LRLALMDLHLKHKSLTRELQSRQDIDAKDKAKLNRLKGEL-ESAVKELEECNCKLAA-LR 269
LR A+ LHLKHK ++ + + +D KD+A++ RL G+L E + EL+ KLAA LR
Sbjct: 172 LRTAMEALHLKHKEISSAMTAMEDSRLKDRAEIGRLTGKLLEDTLAELDTSRRKLAAALR 231
Query: 270 AERDVTKGAFFPVLNLGNKHVAGDRVRDEQRDLRDMESVHKELMDQASHQLLELKGLHDG 329
++D+ G P G V +D+RD+E + + + +L++L+ H
Sbjct: 232 NQKDLPPGPPTPGAVTKEPGEKGG-VYKTSKDIRDLEELLERTKALSECRLVDLQEAHQK 290
Query: 330 RIKVLQQLYNLQNTLKSVKCLSSSKAFLSVKNQLEKSKSEVFKYQALFEKLQVEKDNLAW 389
+ + +QL LQ++ + + SS+ +L +++QL+ K+E+ + QA E+ Q E+D+
Sbjct: 291 NLNLAEQLRRLQDSHIDEQRVISSRPYLLLQDQLKFFKAELDRCQANAERFQAERDSALR 350
Query: 390 RETELNMKIDLVDVFRRSSAVTDSKIADLGIEIQKQIDEKNRIEMRLEEASREPGRKEII 449
E E+++K + + RR AV +S+I L ++Q+ + +++ +++R+EE ++ GRK+ +
Sbjct: 351 HEKEVSLKAEAGEAARRDVAVAESRITALEAKLQQCMADRDDLQLRVEELNQLSGRKDTV 410
Query: 450 AEFRALVSSFPEDMSAMQRQLSKYKEAALDIHILRADVLSLTNVLERKVKECETLLASSA 509
AE + ++S+ ++M MQ QL+KYK+AA ++ LRAD S+ VLERK E + L A
Sbjct: 411 AELKLMISTLHKEMGMMQLQLNKYKDAAHEVCSLRADSHSMAAVLERKKFEFKNLSKKLA 470
Query: 510 DQVAEIHKLQAMVQDLTDSNLELKLILDMYRRESTDSRFV 549
DQ E + ++ L +S ELKLILDMY +ES +SR +
Sbjct: 471 DQAIEADVFKEEIRVLKESEQELKLILDMYEKESIESRDI 510
>gi|255580072|ref|XP_002530869.1| Ubiquitin-protein ligase bre-1, putative [Ricinus communis]
gi|223529558|gb|EEF31509.1| Ubiquitin-protein ligase bre-1, putative [Ricinus communis]
Length = 945
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 176/559 (31%), Positives = 297/559 (53%), Gaps = 30/559 (5%)
Query: 4 TGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEYSA 63
+ EP+ KR H +S P ++T +D AVLQ QNQKLVQ+L+ QK E
Sbjct: 83 SDEPETKRPHLTS--PLSST--------------VDVAVLQCQNQKLVQQLDLQKHELHD 126
Query: 64 LENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSNGQES-----RCLSII 118
LE+K +LK+RQ YD L VN+ W +L+ DL +RA + E+ C I
Sbjct: 127 LESKIQELKDRQTSYDDMLITVNQLWNQLVDDLVLLGVRAGAGHDALETLNHSDYCGGSI 186
Query: 119 EDVTPHPSHDAFLSRLMETGATESSSADN-CPNQMEEDRETGIPRTKNIVSNILAAVDNL 177
P+ + FL RL+ + +S+ +N +EE + T ++ + +D
Sbjct: 187 PSC---PAEEIFLCRLLGIDSIPTSNRNNGIVGYVEEALSSRHSSTVKLMKVLEDMIDAQ 243
Query: 178 WHLKGGLYAAVLKDLQ---DGGSKQKASSNLQSEVKNLRLALMDLHLKHKSLTRELQSRQ 234
+ A+L L D + ++ E+ N+ + LH KH T E+Q
Sbjct: 244 RAKTESIAQALLGKLSTEDDIIQLSRIDDMMKEEINNIHEVIDILHAKHMQYTDEIQIYI 303
Query: 235 DIDAKDKAKLNRLKGELESAVKELEECNCKLAALRAERDVTKGAFFPVLNLGNKHVAGDR 294
+KD++++ L GELE + ELEE KL L+ ++D G P+ ++ N ++ ++
Sbjct: 304 SSHSKDQSEIKHLAGELEEIMAELEESRRKLVNLKMQKDAAIGVHTPIPSIVNGSLSPEK 363
Query: 295 VRDEQRDLRDMESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLKSVKCLSSSK 354
++ + LR+++ +E A+ +L EL+ D + ++L LQN LK K + S +
Sbjct: 364 PTEKSKGLRELKDSIEETKILAADRLSELQEAQDENQILSKELEYLQNELKDDKYIHSCR 423
Query: 355 AFLSVKNQLEKSKSEVFKYQALFEKLQVEKDNLAWRETELNMKIDLVDVFRRSSAVTDSK 414
+ V +QL+ +++ +Y+AL E LQ ++ L RE E+N K++ VD R + ++S+
Sbjct: 424 LYNLVNDQLQHWNADIQRYKALTEPLQADRSFLVRREKEVNAKVESVDAARNTIDTSESR 483
Query: 415 IADLGIEIQKQIDEKNRIEMRLEEASREPGRKEIIAEFRALVSSFPEDMSAMQRQLSKYK 474
I +L +++ K I EKN +E+++EEA ++ GRK+I AEF + ++ ++M M+ QL ++K
Sbjct: 484 IEELELQLHKCIIEKNDLEVKMEEAMQDSGRKDIKAEFHVMAAALSKEMGMMEAQLKRWK 543
Query: 475 EAALDIHILRADVLSLTNVLERKVKECETLLASSADQVAEIHKLQAMVQDLTDSNLELKL 534
E A + L + SL +L K E ++L + A+Q+ EI LQ +++ L LEL++
Sbjct: 544 ETAHEALSLCKEAQSLRILLSEKTNEQKSLTSKCAEQMLEIKSLQTVIEKLQKDKLELQI 603
Query: 535 ILDMYRRESTDSRFVNLLE 553
ILDMY +E DSR +LLE
Sbjct: 604 ILDMYGQEGYDSR--DLLE 620
>gi|168063879|ref|XP_001783895.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664578|gb|EDQ51292.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 852
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 165/529 (31%), Positives = 299/529 (56%), Gaps = 22/529 (4%)
Query: 37 KIDTAVLQFQNQKLVQKLETQKVEYSALENKFAQLKERQQPYDSTLKVVNKSWEELITDL 96
+++ Q+QNQKL Q L+ Q+ E S LE++ A+ K +Q YD+TL VN+ W L+ DL
Sbjct: 2 QVEPVTPQYQNQKLAQLLDHQRSEISTLESRCAEFKSKQASYDNTLIAVNRKWNLLVDDL 61
Query: 97 ESCSMRARESSNGQES-RCLSIIED--VTPHPSHDAFLSRLMETGATESSSADNC--PNQ 151
E ++RA ++G E LS+ + ++ P + FL RL+ETGATESS+ + +
Sbjct: 62 EFLAVRANTPTSGLEVLEPLSVANERKISAAPPEETFLQRLLETGATESSNNEESSNGSV 121
Query: 152 MEEDRETGIPRTKNIVSNILAAVDNLWHLKGGLYAAVLKDL---QDGGSK-QKASSNLQS 207
+E + +T + +L A+D L K L+D+ D G ++ + +L++
Sbjct: 122 VEAGLVSRKAKTMKTMKYLLQAID-LQRAKNDKLETSLRDIVHPHDAGQLLEEKNEDLRT 180
Query: 208 EVKNLRLALMDLHLKHKSLTRELQSRQDIDAKDKAKLNRLKGELESAVKELEECNCKLAA 267
E+ +R L LHLKH + E+ + +D+ KD++K+ L GELE ELE C KLA
Sbjct: 181 EITTIRGVLEALHLKHNEMLAEIGTARDLKTKDQSKIKCLSGELEETASELELCRRKLAT 240
Query: 268 LRAERDVTKGAFFPV--LNLGNKHVAGDRVRDEQ---RDLRDMESVHKELMDQASHQLLE 322
L+++++ + + L K GDRV + R+ R++E+ +E+ AS +L E
Sbjct: 241 LKSQKEAAAVGMPTIASVQLSAKIEGGDRVSGAEKLSREARELEAALEEMKTLASKRLTE 300
Query: 323 LKGLHDGRIKVLQQLYNLQNTLKSVKCLSSSKAFLSVKNQLEKSKSEVFKYQALFEKLQV 382
L+ ++ + Q++ +Q+ L + + SS+ +L + +Q + K+EV +Y+ L
Sbjct: 301 LQETLQTQLNLSQRMQQMQDALLDEQRILSSRPYLVLDDQAQFLKNEVERYRGL-----T 355
Query: 383 EKDNLAWRETELNMKIDLVDVFRRSSAVTDSKIADLGIEIQKQIDEKNRIEMRLEEASRE 442
E D+++ R+ E+ +K + + R+ A++D + A+L ++Q+ + +++ +++RLE+A +
Sbjct: 356 ECDSMSRRDKEILLKAEAGEAAHRTGAISDDRAAELETKLQECMADRDALQLRLEDALQS 415
Query: 443 PGRKEIIAEFRALVSSFPEDMSAMQRQLSKYKEAALDIHILRADVLSLTNVLERKVK--E 500
GRK+ + E + + + ++MS + QL K K+AA ++ +L A + SL +LERK + E
Sbjct: 416 AGRKDSVPELQVMKYTLEKEMSMTKAQLRKPKDAACEVELLEAKMPSLREILERKAQALE 475
Query: 501 CETLLASSADQVAEIHKLQAMVQDLTDSNLELKLILDMYRRESTDSRFV 549
C+ L Q AE+ L+A ++ L S+ L+L+L+MY +ES D R +
Sbjct: 476 CKNLSNRCVAQAAELTSLKAKLEGLRQSDQGLQLMLEMYEKESKDPRTI 524
>gi|20196919|gb|AAM14833.1| hypothetical protein [Arabidopsis thaliana]
Length = 263
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 131/253 (51%), Positives = 175/253 (69%), Gaps = 6/253 (2%)
Query: 1 MGSTGEPDRKRRHFSSISPT--AATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQK 58
M STGEPDRKRRHFSSISP+ AA KK PFF S E K+DTAVLQFQN KL QKLE Q+
Sbjct: 1 MASTGEPDRKRRHFSSISPSEAAAAVKKQPFFWPSSEDKLDTAVLQFQNLKLSQKLEAQQ 60
Query: 59 VEYSALENKFAQLKERQQPYDSTLKVVNKSWE-ELITDLESCSMRARESSNGQESRCLSI 117
VE S LE+K +Q+KE+Q PY+S+LK V+KSWE +L +ESCS+R +SS+G R ++
Sbjct: 61 VECSILEDKLSQIKEKQLPYNSSLKTVHKSWEKQLTASVESCSVRVSDSSSGAH-RFVNK 119
Query: 118 IEDVTPHPSHDAFLSRLMETGATESSSADNCPNQMEEDRETGIPRTKNIVSNILAAVDNL 177
+ +P +D F++RL+ETGATESSS++ C NQMEE+ + + N++AA ++L
Sbjct: 120 EDGSSPAVKND-FINRLLETGATESSSSNICSNQMEENGVNTSSQMTQTLYNLVAATEDL 178
Query: 178 WHLKGGLYAAVLK-DLQDGGSKQKASSNLQSEVKNLRLALMDLHLKHKSLTRELQSRQDI 236
LK LY VL+ +L Q A S L+SE+K+ R L D+ +K KSL+RELQS +D
Sbjct: 179 RCLKDELYPTVLRTNLGKDLCGQLALSELESEIKSFRGDLDDVLVKFKSLSRELQSHRDA 238
Query: 237 DAKDKAKLNRLKG 249
DAK + L R++G
Sbjct: 239 DAKVRVDLKRIRG 251
>gi|356554544|ref|XP_003545605.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-like 2-like isoform 1
[Glycine max]
Length = 879
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 167/548 (30%), Positives = 286/548 (52%), Gaps = 8/548 (1%)
Query: 6 EPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEYSALE 65
EP++KR H +S+S + +N + K D VLQFQNQ+LVQ+++ QK LE
Sbjct: 8 EPEKKRPHLTSVS---SRTPRNSINSPTNNKTADAGVLQFQNQQLVQQIDIQKHALHDLE 64
Query: 66 NKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSNGQESRCLSIIED--VTP 123
K +LK +Q YD L +N+ W +L+ D+ +RA + L+ I++ V
Sbjct: 65 EKIRELKGKQSSYDDLLIALNQLWTQLVDDMILLGIRAGRGKGKDTLQHLTDIDNPQVPL 124
Query: 124 HPSHDAFLSRLMETGATESSSADNCPNQMEEDRETGIPRTKNIVSNILAAVDNLWHLKGG 183
P+ D FL RL++ + + S D + +EE T+ ++ + +D+ G
Sbjct: 125 CPAEDMFLCRLIQKDSIKGISDDEIISYVEEALALRQSYTRELLKLLKDTIDDQMERAGS 184
Query: 184 LYAAVLKDLQDGGS---KQKASSNLQSEVKNLRLALMDLHLKHKSLTRELQSRQDIDAKD 240
+ + DL + K + EV N R + LH KHK T +Q+ + ++D
Sbjct: 185 IAQVLHGDLSSEDAIIQMSKIDDMTKEEVDNFREVVDTLHAKHKEYTVAIQNSINEYSQD 244
Query: 241 KAKLNRLKGELESAVKELEECNCKLAALRAERDVTKGAFFPVLNLGNKHVAGDRVRDEQR 300
++++ RL GEL+ V ELEE KL L ++D G P + N +++ + + D
Sbjct: 245 QSEIKRLAGELDEIVAELEESRRKLVNLEMQKDAAIGMNSPKADAVNGNLSPENIADRTM 304
Query: 301 DLRDMESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLKSVKCLSSSKAFLSVK 360
LR+++ +E + +L EL+ + + +Q +LQN LK K + +S+ +
Sbjct: 305 GLRELKDSIEEAKIVDADRLSELQDAQEDNQTLTKQFQDLQNELKDDKYVRTSRIYSLAN 364
Query: 361 NQLEKSKSEVFKYQALFEKLQVEKDNLAWRETELNMKIDLVDVFRRSSAVTDSKIADLGI 420
+QL+ +E+ +Y+ E LQ ++A E ELN+K++ D R+ +D +I DL +
Sbjct: 365 DQLQHWMTELARYKTSVESLQAGSVHVAKWENELNLKLESADSARQILGNSDHRIDDLEL 424
Query: 421 EIQKQIDEKNRIEMRLEEASREPGRKEIIAEFRALVSSFPEDMSAMQRQLSKYKEAALDI 480
++QK I EKN +E+++EEA ++ GRK+I +EF + S+ ++M M+ QL ++K+AA +
Sbjct: 425 QLQKCIIEKNDLEIKMEEAKQDTGRKDIKSEFHVMASALSKEMGMMEGQLKRWKDAAHEA 484
Query: 481 HILRADVLSLTNVLERKVKECETLLASSADQVAEIHKLQAMVQDLTDSNLELKLILDMYR 540
LR SL L K E ++L A+QV EI L+ + + L N EL+ +LDM+
Sbjct: 485 VSLREKAHSLREALSTKTSELKSLANKCAEQVLEIKSLKTLTEKLQKENQELEFVLDMHG 544
Query: 541 RESTDSRF 548
E+ D R+
Sbjct: 545 LENYDKRY 552
>gi|449448812|ref|XP_004142159.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-like 2-like [Cucumis
sativus]
Length = 880
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 171/565 (30%), Positives = 286/565 (50%), Gaps = 44/565 (7%)
Query: 6 EPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEYSALE 65
EPD+KR H SS++P A +N +D VL FQNQKLVQ+ ++QK E LE
Sbjct: 8 EPDKKRPHLSSLTPAMA---RNSTTSQPHNNSVDATVLHFQNQKLVQETDSQKHELQDLE 64
Query: 66 NKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSN-----GQESRCLSIIED 120
K +LK++Q YD +L +N+ W +L+ DL ++A GQ I
Sbjct: 65 AKIYELKKKQSFYDESLIAINQLWNQLVDDLVFLGLQAGGGGEILQNLGQAGHSQGSIPS 124
Query: 121 VTPHPSHDAFLSRLM------------------ETGATESSSADNCPNQMEEDRETGIPR 162
P+ D FL RL+ E + +S +E+ +T +
Sbjct: 125 C---PAEDMFLCRLLLRDSIEVRHDEQIVKYVKEALTSRHASTMELFKYLEDILDTQREK 181
Query: 163 TKNIVSNILAAVDNLWHLKGGLYAAVLKDLQDGGSKQKASSNLQSEVKNLRLALMDLHLK 222
T NIVS W+++ A++ K ++ E NL + LHLK
Sbjct: 182 TANIVSA--------WNVEQSPEDAIVH-------LSKIDEMMKEEATNLGEIIKILHLK 226
Query: 223 HKSLTRELQSRQDIDAKDKAKLNRLKGELESAVKELEECNCKLAALRAERDVTKGAFFPV 282
HK+ E+Q+ D+ ++ RL EL+ ++ ELEEC KL +L ++DVT P
Sbjct: 227 HKAYADEIQTYACSHLMDQTEIKRLSEELDESMAELEECRRKLVSLMMQKDVTIAMHVPT 286
Query: 283 LNLGNKHVAGDRVRDEQRDLRDMESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQN 342
L + N +++ + + R+++ +E A+ +L E + + + + QL +L+N
Sbjct: 287 LGVVNGNLSPQKPAERTIGFRELKESIEETKILAADRLSEFQDAWEDNLTLSSQLQDLEN 346
Query: 343 TLKSVKCLSSSKAFLSVKNQLEKSKSEVFKYQALFEKLQVEKDNLAWRETELNMKIDLVD 402
K + SS+ ++ + +QL+ +EV +Y++L E LQ ++ ++ RE +LN K++ VD
Sbjct: 347 DWMDEKYVHSSRLYILLNDQLQHLTAEVDRYKSLTEALQTDRSHVIRREKDLNAKLESVD 406
Query: 403 VFRRSSAVTDSKIADLGIEIQKQIDEKNRIEMRLEEASREPGRKEIIAEFRALVSSFPED 462
V R S S+I +L ++QK + EKN +E+ +EEA ++ R++I EF + S+ ++
Sbjct: 407 VARSSMDNNCSRIEELEHQLQKILVEKNDLEIEMEEAVQDSAREDIKGEFHVMASALSKE 466
Query: 463 MSAMQRQLSKYKEAALDIHILRADVLSLTNVLERKVKECETLLASSADQVAEIHKLQAMV 522
M M+ QL ++K+ A + +R V +L L K KE + L A Q+ EI L+++V
Sbjct: 467 MGMMESQLKRWKDTAHEAVSIREKVQALETSLAMKTKEKKGLTDICAQQMMEIKSLKSLV 526
Query: 523 QDLTDSNLELKLILDMYRRESTDSR 547
+ L + LEL+L LDMY +E+ D R
Sbjct: 527 EKLLEDKLELELFLDMYGQETYDER 551
>gi|356554546|ref|XP_003545606.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-like 2-like isoform 2
[Glycine max]
Length = 898
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 167/549 (30%), Positives = 286/549 (52%), Gaps = 9/549 (1%)
Query: 6 EPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEYSALE 65
EP++KR H +S+S + +N + K D VLQFQNQ+LVQ+++ QK LE
Sbjct: 8 EPEKKRPHLTSVS---SRTPRNSINSPTNNKTADAGVLQFQNQQLVQQIDIQKHALHDLE 64
Query: 66 NKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSNGQESRCLSIIED--VTP 123
K +LK +Q YD L +N+ W +L+ D+ +RA + L+ I++ V
Sbjct: 65 EKIRELKGKQSSYDDLLIALNQLWTQLVDDMILLGIRAGRGKGKDTLQHLTDIDNPQVPL 124
Query: 124 HPSHDAFLSRLMETGATESSSADNCPNQMEEDRETGIPRTKNIVSNILAAVDNLWHLKGG 183
P+ D FL RL++ + + S D + +EE T+ ++ + +D+ G
Sbjct: 125 CPAEDMFLCRLIQKDSIKGISDDEIISYVEEALALRQSYTRELLKLLKDTIDDQMERAGS 184
Query: 184 LYAAVLKDLQDGGS---KQKASSNLQSEVKNLRLALMDLHLKHKSLTRELQSRQDIDAKD 240
+ + DL + K + EV N R + LH KHK T +Q+ + ++D
Sbjct: 185 IAQVLHGDLSSEDAIIQMSKIDDMTKEEVDNFREVVDTLHAKHKEYTVAIQNSINEYSQD 244
Query: 241 KAKLNRLKGELESAVKELEECNCKLAALRAERDVTKGAFFPVLNLGNKHVAGDRVRDEQR 300
++++ RL GEL+ V ELEE KL L ++D G P + N +++ + + D
Sbjct: 245 QSEIKRLAGELDEIVAELEESRRKLVNLEMQKDAAIGMNSPKADAVNGNLSPENIADRTM 304
Query: 301 DLRDMESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLKSVKCLSSSKAFLSVK 360
LR+++ +E + +L EL+ + + +Q +LQN LK K + +S+ +
Sbjct: 305 GLRELKDSIEEAKIVDADRLSELQDAQEDNQTLTKQFQDLQNELKDDKYVRTSRIYSLAN 364
Query: 361 NQLEKSKSEVFKYQALFEKLQVEKDNLAWRETELNMKIDLVDVFRRSSAVTDSKIADLGI 420
+QL+ +E+ +Y+ E LQ ++A E ELN+K++ D R+ +D +I DL +
Sbjct: 365 DQLQHWMTELARYKTSVESLQAGSVHVAKWENELNLKLESADSARQILGNSDHRIDDLEL 424
Query: 421 EIQKQIDEKNRIEMRLEEASREPGRKEIIAEFRALVSSFPEDMSAMQRQLSKYKEAALDI 480
++QK I EKN +E+++EEA ++ GRK+I +EF + S+ ++M M+ QL ++K+AA +
Sbjct: 425 QLQKCIIEKNDLEIKMEEAKQDTGRKDIKSEFHVMASALSKEMGMMEGQLKRWKDAAHEA 484
Query: 481 HILRADVLSLTNVLERK-VKECETLLASSADQVAEIHKLQAMVQDLTDSNLELKLILDMY 539
LR SL L K E ++L A+QV EI L+ + + L N EL+ +LDM+
Sbjct: 485 VSLREKAHSLREALSTKQTSELKSLANKCAEQVLEIKSLKTLTEKLQKENQELEFVLDMH 544
Query: 540 RRESTDSRF 548
E+ D R+
Sbjct: 545 GLENYDKRY 553
>gi|356501257|ref|XP_003519442.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-like 2-like [Glycine
max]
Length = 881
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 167/552 (30%), Positives = 285/552 (51%), Gaps = 16/552 (2%)
Query: 6 EPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEYSALE 65
EP++KR H + +S + +N + K D VLQFQNQ+LVQ+++ QK LE
Sbjct: 8 EPEKKRPHLTFVS---SRTPRNSINTPATNKTADPGVLQFQNQQLVQQIDIQKHALHDLE 64
Query: 66 NKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSNGQESRCLSIIEDV-TPH 124
K +LK +Q YD L +N+ W +L+ D+ +RA G+ L + D+ P
Sbjct: 65 EKIRELKGKQSSYDDLLIALNQLWTQLVDDMILLGIRA---GRGKGKDTLQHLTDIDNPQ 121
Query: 125 ------PSHDAFLSRLMETGATESSSADNCPNQMEEDRETGIPRTKNIVSNILAAVDNLW 178
P+ D FL RL++ + + S D + ++E T+ ++ + +D
Sbjct: 122 GSLPLCPAEDIFLCRLIQKDSIKGISDDEIISCVKEALALRQSSTRELLKLLKDTIDYQM 181
Query: 179 HLKGGLYAAVLKDLQDGGSK---QKASSNLQSEVKNLRLALMDLHLKHKSLTRELQSRQD 235
G + + +DL +K K + E N R + LH KHK T +Q+ +
Sbjct: 182 ERAGSIAQVLHEDLSSEDAKIQMSKIDDMTKEEADNFREVVDTLHAKHKEYTVAIQNSIN 241
Query: 236 IDAKDKAKLNRLKGELESAVKELEECNCKLAALRAERDVTKGAFFPVLNLGNKHVAGDRV 295
++D++++ RL GEL+ V ELEE KL L ++D G P + N +++ + +
Sbjct: 242 ECSQDQSEIKRLAGELDEIVAELEESRRKLVNLEMQKDAAIGMNSPNADAVNGNLSPENI 301
Query: 296 RDEQRDLRDMESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLKSVKCLSSSKA 355
D LR+++ +E + +L EL+ + + +Q +LQN LK K + +S+
Sbjct: 302 ADRTMGLRELKDSIEEAKIVEADRLSELQDAQEDNQTLTKQFQDLQNELKDDKYVCTSRI 361
Query: 356 FLSVKNQLEKSKSEVFKYQALFEKLQVEKDNLAWRETELNMKIDLVDVFRRSSAVTDSKI 415
+ +QL+ +E+ +Y+ E LQ ++A E ELN+K++ D R+ +D +I
Sbjct: 362 YSLANDQLQHWMTELTRYKTSVESLQAGNVHVAKWENELNLKLESADSARQILGNSDHRI 421
Query: 416 ADLGIEIQKQIDEKNRIEMRLEEASREPGRKEIIAEFRALVSSFPEDMSAMQRQLSKYKE 475
DL +++QK I EKN +E+++EEA ++ GRK+I +EF + S+ ++M M+ QL ++K+
Sbjct: 422 DDLELQLQKCIIEKNDLEIKMEEAKQDTGRKDIKSEFHVMASALSKEMGMMEGQLKRWKD 481
Query: 476 AALDIHILRADVLSLTNVLERKVKECETLLASSADQVAEIHKLQAMVQDLTDSNLELKLI 535
AA + LR SL L K E ++L A+QV EI L+ + + L N EL+ I
Sbjct: 482 AAHEAVSLREKTHSLREALSMKTSELKSLTNKCAEQVLEIKSLKTLTEKLQKENQELEFI 541
Query: 536 LDMYRRESTDSR 547
LDM+ +E+ D R
Sbjct: 542 LDMHGQENYDKR 553
>gi|449519462|ref|XP_004166754.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
BRE1-like 2-like [Cucumis sativus]
Length = 880
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 170/565 (30%), Positives = 284/565 (50%), Gaps = 44/565 (7%)
Query: 6 EPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEYSALE 65
EPD+KR H SS++P A +N +D VL FQNQKLVQ+ ++QK E LE
Sbjct: 8 EPDKKRPHLSSLTPAMA---RNSTTSQPHNNSVDATVLHFQNQKLVQETDSQKHELQDLE 64
Query: 66 NKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSN-----GQESRCLSIIED 120
K +LK +Q YD +L +N+ W +L+ DL ++A GQ I
Sbjct: 65 AKIYELKXKQSFYDESLIAINQLWNQLVDDLVXLGLQAGGGGEILQNLGQAGHSQGSIPS 124
Query: 121 VTPHPSHDAFLSRLM------------------ETGATESSSADNCPNQMEEDRETGIPR 162
P+ D FL RL+ E + +S +E+ +T +
Sbjct: 125 C---PAEDMFLCRLLLRDSIEVRHDEQIVKYVKEALTSRHASTMELFKYLEDILDTQREK 181
Query: 163 TKNIVSNILAAVDNLWHLKGGLYAAVLKDLQDGGSKQKASSNLQSEVKNLRLALMDLHLK 222
T NIVS W+++ A++ K ++ E NL + LHLK
Sbjct: 182 TANIVS--------AWNVEQSPEDAIVH-------LSKIDEMMKEEATNLGEIIKILHLK 226
Query: 223 HKSLTRELQSRQDIDAKDKAKLNRLKGELESAVKELEECNCKLAALRAERDVTKGAFFPV 282
HK+ E+Q+ D+ ++ RL EL+ ++ ELEEC KL +L ++DVT P
Sbjct: 227 HKAYADEIQTYACSHLMDQTEIKRLSEELDESMAELEECRRKLVSLMMQKDVTIAMHVPT 286
Query: 283 LNLGNKHVAGDRVRDEQRDLRDMESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQN 342
L + N +++ + + R+++ +E A+ +L E + + + + QL +L+N
Sbjct: 287 LGVVNGNLSPQKPAERTIGFRELKESIEETKILAADRLSEFQDAWEDNLTLSSQLQDLEN 346
Query: 343 TLKSVKCLSSSKAFLSVKNQLEKSKSEVFKYQALFEKLQVEKDNLAWRETELNMKIDLVD 402
K + SS+ ++ + +QL+ +EV +Y++L E LQ ++ ++ RE +LN K++ VD
Sbjct: 347 DWMDEKYVHSSRLYILLNDQLQHLTAEVDRYKSLTEALQTDRSHVIRREKDLNAKLESVD 406
Query: 403 VFRRSSAVTDSKIADLGIEIQKQIDEKNRIEMRLEEASREPGRKEIIAEFRALVSSFPED 462
V R S S+I +L ++QK + KN +E+ +EEA ++ R++I EF + S+ ++
Sbjct: 407 VARSSMDNNCSRIEELEHQLQKILVXKNDLEIEMEEAVQDSAREDIKGEFHVMASALSKE 466
Query: 463 MSAMQRQLSKYKEAALDIHILRADVLSLTNVLERKVKECETLLASSADQVAEIHKLQAMV 522
M M+ QL ++K+ A + +R V +L L K KE + L A Q+ EI L+++V
Sbjct: 467 MGMMESQLKRWKDTAHEAVSIREKVQALETSLAMKTKEKKGLTDICAQQMMEIKSLKSLV 526
Query: 523 QDLTDSNLELKLILDMYRRESTDSR 547
+ L + LEL+L LDMY +E+ D R
Sbjct: 527 EKLLEDKLELELFLDMYGQETYDER 551
>gi|224057118|ref|XP_002299129.1| predicted protein [Populus trichocarpa]
gi|222846387|gb|EEE83934.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 159/525 (30%), Positives = 269/525 (51%), Gaps = 47/525 (8%)
Query: 9 RKRRHFSS-ISPTAATAKKN------------PFFPS-----SEEKKIDTAVLQFQNQKL 50
+KR H +S +SPT A PF+ S ++D VLQ QNQKL
Sbjct: 11 KKRTHLNSPLSPTMARNSSTSPPDNKSVKISLPFYISLWFFFFASIQVDVTVLQCQNQKL 70
Query: 51 VQKLETQKVEYSALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSNGQ 110
VQ+L+ QK E+ LE K +LK++Q YD L VNK W +L+ DL +RA GQ
Sbjct: 71 VQQLDVQKHEFHGLEAKIKELKDKQASYDGMLITVNKLWNQLVDDLVLLGIRA---GGGQ 127
Query: 111 ESRCLSIIE-------DVTPHPSHDAFLSRLMETGATESSSADNCPNQMEEDRETGIPRT 163
+ L I++ + P P+ FL RL++T + +S+ D +EE + T
Sbjct: 128 D--FLQILDHADHSGGSIPPCPAEQIFLCRLLKTDSIQSNGNDGIVRSVEEALASRHSST 185
Query: 164 KNIVSNILAAVDN--------LWHLKGGLYA--AVLKDLQDGGSKQKASSNLQSEVKNLR 213
++ + +D + +L G LY A+++ K ++ E KNLR
Sbjct: 186 MELMKFLEDTIDAQRAKTESIVENLNGKLYTEDAIIQ-------LSKIDDMMKDEAKNLR 238
Query: 214 LALMDLHLKHKSLTRELQSRQDIDAKDKAKLNRLKGELESAVKELEECNCKLAALRAERD 273
+ LH KHK + E+Q+ + D++++ R+ G+LE + ELEE KL L+ ++D
Sbjct: 239 EVIDVLHSKHKEYSDEIQTCISNHSTDQSEIKRVAGDLEEIMAELEESRRKLVNLKMQKD 298
Query: 274 VTKGAFFPVLNLGNKHVAGDRVRDEQRDLRDMESVHKELMDQASHQLLELKGLHDGRIKV 333
G P + N +++ ++ D + LR++ E A+ +L EL+ D +
Sbjct: 299 AAVGIHMPAPSAVNGNLSPEKTADRSKRLRELRDSLDETKILAADRLSELEDARDENQTL 358
Query: 334 LQQLYNLQNTLKSVKCLSSSKAFLSVKNQLEKSKSEVFKYQALFEKLQVEKDNLAWRETE 393
++L +L+N LK K + SS+ + V +QL+ EV +Y+ L + LQ ++ + RE E
Sbjct: 359 SKELEDLENELKDDKHIYSSRLYSLVDDQLQHWNDEVERYKTLTDSLQADRSFVVRREKE 418
Query: 394 LNMKIDLVDVFRRSSAVTDSKIADLGIEIQKQIDEKNRIEMRLEEASREPGRKEIIAEFR 453
+ K++ D R + +I +L ++++K I EKN +E+++EEA ++ GRK+I EFR
Sbjct: 419 VKAKVESADAARNTMDTAVPRIEELELKLRKCIIEKNDLEIKMEEAVQDSGRKDIKEEFR 478
Query: 454 ALVSSFPEDMSAMQRQLSKYKEAALDIHILRADVLSLTNVLERKV 498
+ S+ ++M M+ QL+++K+ A + LR + SL +L KV
Sbjct: 479 VMASALSKEMGMMEAQLNRWKQTAHEAVSLREESKSLKALLNEKV 523
>gi|357134331|ref|XP_003568771.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-like 2-like
[Brachypodium distachyon]
Length = 844
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 160/544 (29%), Positives = 267/544 (49%), Gaps = 59/544 (10%)
Query: 38 IDTAVLQFQNQKLVQKLETQKVEYSALENKFAQLKERQQPYDSTLKVVNKSWEELITDLE 97
+D A LQ++NQKLVQ+LE QK E LE KF +L+ Q YD+TL +NK+W +LI DL
Sbjct: 1 MDAAALQYENQKLVQQLEAQKSEMHILEGKFKELRNEQSSYDNTLIHLNKTWNQLIDDLV 60
Query: 98 SCSMRARESSNGQESRCLSIIEDVTPH-------PSHDAFLSRLMETGATESSSADNCPN 150
+R G + L ++ PS + FL L+++ N N
Sbjct: 61 LLGVRV-----GVDLDNLQALDHEELSEESLESCPSEEIFLCMLLKSK--------NYRN 107
Query: 151 QMEEDRETGIPRTKNIVSNILAAVDNLWHLKGGLYAAVLKDLQDGGSKQKASS------- 203
N S++L V+ L+ AA+++ LQ+G + Q A S
Sbjct: 108 --------------NDDSSMLKFVEEALALRHRATAALMRSLQEGIAAQHARSESLSLAL 153
Query: 204 ------------------NLQSEVKNLRLALMDLHLKHKSLTRELQSRQDIDAKDKAKLN 245
+L+ V N+ A+ ++ KHK E+++ ++ K+ K+
Sbjct: 154 NGRKPNEDVIVALQNHNDHLKEVVANVHEAISIVNGKHKKYLDEIEALKNSYPKELEKIK 213
Query: 246 RLKGELESAVKELEECNCKLAALRAERDVTKGAFFPVLNLGNKHVAGDRVRDEQRDLRDM 305
RL GELE +++LEE KL L+ +R N N + D+ D+
Sbjct: 214 RLSGELEKTMEDLEESRPKLVVLQLQRHGGSLMNISGPNATNGATLTAKSSDKSMGWPDL 273
Query: 306 ESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLKSVKCLSSSKAFLSVKNQLEK 365
+ E A+++L EL + + + +QL +LQ LK + +SK + + +QL
Sbjct: 274 KDAVDEAKTLATNRLFELHETQEDNLILSRQLEDLQGQLKDDNYIFTSKPYTILSDQLRH 333
Query: 366 SKSEVFKYQALFEKLQVEKDNLAWRETELNMKIDLVDVFRRSSAVTDSKIADLGIEIQKQ 425
+E+ +Y+ L E LQ +K+ RE E+ K + VD R+S +++I +L +I K
Sbjct: 334 LNTEIERYRGLVEVLQNDKNQFMQREKEMCAKGESVDSIRQSITTHEARIEELEHQILKS 393
Query: 426 IDEKNRIEMRLEEASREPGRKEIIAEFRALVSSFPEDMSAMQRQLSKYKEAALDIHILRA 485
I EKN IE+++EE ++ G+K+ E + ++ ++M M+ QL++ K+AA + H LR
Sbjct: 394 IAEKNEIEIKVEETLQDSGKKDFKDEIHVMAAALSKEMEMMENQLNRSKDAASEAHALRE 453
Query: 486 DVLSLTNVLERKVKECETLLASSADQVAEIHKLQAMVQDLTDSNLELKLILDMYRRESTD 545
+ SL +L +K E + + QV EI L+A+++ L EL+ I+DMY +ES+D
Sbjct: 454 EAKSLRTLLVKKTDEQKEISDRYNTQVIEIKSLKALIETLDQEKQELEFIVDMYAKESSD 513
Query: 546 SRFV 549
SR +
Sbjct: 514 SRTI 517
>gi|115483502|ref|NP_001065421.1| Os10g0565600 [Oryza sativa Japonica Group]
gi|122248974|sp|Q336R3.1|BRE1B_ORYSJ RecName: Full=E3 ubiquitin-protein ligase BRE1-like 2
gi|152013370|sp|A2ZAC2.2|BRE1B_ORYSI RecName: Full=E3 ubiquitin-protein ligase BRE1-like 2
gi|78709022|gb|ABB47997.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|113639953|dbj|BAF27258.1| Os10g0565600 [Oryza sativa Japonica Group]
gi|215737367|dbj|BAG96296.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218185033|gb|EEC67460.1| hypothetical protein OsI_34687 [Oryza sativa Indica Group]
gi|222613286|gb|EEE51418.1| hypothetical protein OsJ_32496 [Oryza sativa Japonica Group]
Length = 844
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 160/543 (29%), Positives = 274/543 (50%), Gaps = 49/543 (9%)
Query: 38 IDTAVLQFQNQKLVQKLETQKVEYSALENKFAQLKERQQPYDSTLKVVNKSWEELITDLE 97
+D A LQ++NQKLVQ+LE QK + ALE KF +L++ Q YD+TL +NK W +LI DL
Sbjct: 1 MDAAALQYENQKLVQQLEAQKSKMRALEGKFKELRDEQCSYDNTLICLNKMWNQLIDDLV 60
Query: 98 SCSMRARESSNGQES--RCLSIIEDVTPHPSHDAFLSRLMETGATESSSADNCPNQMEED 155
+RA NG ++ E + PS + FL RL+ ++ N N
Sbjct: 61 LLGVRAGGDLNGLQALDHEEMSEESLESCPSEEIFLFRLL--------NSRNFRN----- 107
Query: 156 RETGIPRTKNIVSNILAAVDNLWHLKGGLYAAVLKDLQDGGSKQKASSN----------- 204
N S++ V+ L+ ++K LQ+ + Q+A S
Sbjct: 108 ---------NDDSSLSKLVEEALALRYSTTVTLMKSLQEAFAVQQARSESLSLALNGQNS 158
Query: 205 --------------LQSEVKNLRLALMDLHLKHKSLTRELQSRQDIDAKDKAKLNRLKGE 250
L+ V NLR A+ ++ KH+ E+++ ++ +++ ++ L GE
Sbjct: 159 SEDVIVALENHNDYLKEVVDNLRQAVSIINRKHEKYLDEIEAFKNNQSRELHEVKCLSGE 218
Query: 251 LESAVKELEECNCKLAALRAERDVTKGAFFPVLNLGNKHVAGDRVRDEQRDLRDMESVHK 310
LE ++ ELEE KLA L+ + N N V+ D+ D+ RD++ +
Sbjct: 219 LEESMAELEESRRKLAVLQLQTGGGSLMNTSAPNGVNGSVSTDKSSDKGMGWRDLKDAVE 278
Query: 311 ELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLKSVKCLSSSKAFLSVKNQLEKSKSEV 370
E A+++L EL + + + +QL ++Q+ LK + +SK + + +QL +E+
Sbjct: 279 EAKTLAANRLFELHETQEDNLILSKQLEDIQDQLKDENYIVTSKPYTILSDQLHHLNAEI 338
Query: 371 FKYQALFEKLQVEKDNLAWRETELNMKIDLVDVFRRSSAVTDSKIADLGIEIQKQIDEKN 430
+Y+ L E LQ EKD L +E E+ K + VD ++S +KI DL EIQK + EKN
Sbjct: 339 ERYRGLVEVLQNEKDQLMQKEEEMLAKAESVDAVQQSITTYKAKIEDLEHEIQKLMAEKN 398
Query: 431 RIEMRLEEASREPGRKEIIAEFRALVSSFPEDMSAMQRQLSKYKEAALDIHILRADVLSL 490
+E++ EEA ++ G+K+ E + +S ++M + Q+++ K+AA + LR + L
Sbjct: 399 DLEIKAEEALQDSGKKDFKDEIHVMAASLSKEMELLDNQMNRSKDAASEALALREEADYL 458
Query: 491 TNVLERKVKECETLLASSADQVAEIHKLQAMVQDLTDSNLELKLILDMYRRESTDSRFVN 550
+L +K+ E + + QV EI L+A+++ L EL+ I+DM +E ++SR ++
Sbjct: 459 RTLLAKKIDEQKEISDRYNTQVTEIKSLKALIETLDQEKQELQFIVDMLGKECSESRAIS 518
Query: 551 LLE 553
+E
Sbjct: 519 EIE 521
>gi|297847888|ref|XP_002891825.1| hypothetical protein ARALYDRAFT_314752 [Arabidopsis lyrata subsp.
lyrata]
gi|297337667|gb|EFH68084.1| hypothetical protein ARALYDRAFT_314752 [Arabidopsis lyrata subsp.
lyrata]
Length = 879
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 158/554 (28%), Positives = 284/554 (51%), Gaps = 19/554 (3%)
Query: 4 TGEPDRKRRHF-SSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEYS 62
+ EP +K+ H S+SPT+ +P P + K +D VLQ QNQKLVQ+L+ QK
Sbjct: 6 SDEPMQKKPHLLDSVSPTSMARNSSPSHPIA--KSVDATVLQLQNQKLVQQLDLQKKHLY 63
Query: 63 ALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSNGQESRCLSIIED-- 120
+E K +L+ +Q YD L VN+ W +L+ DL +RA +N + + L I +
Sbjct: 64 DVETKIQELQIKQTSYDDELISVNQLWNQLVDDLILLGVRA--GANQEALKYLDIADKQR 121
Query: 121 VTPHPSHDAFLSRLMETGATESSSADNCPNQMEEDRETGIPRTKNIVSNILAAVDNLWHL 180
V P + + FL RL++ + ++S++D ++EE + + ++ +N
Sbjct: 122 VPPCAADEMFLCRLLQVDSLDTSNSDEVVGKVEE----ALALRHSSTMELMGLFENTIAT 177
Query: 181 KGGLYAAVLKDLQDGGSKQKASSNLQS-------EVKNLRLALMDLHLKHKSLTRELQSR 233
+ ++ ++L S + A+ L S E KNLR + LH++HK T ++ +
Sbjct: 178 QRAKAESISQNLHAVKSAEDATIQLSSINDLMKEEAKNLREMIDTLHVRHKEHTEQIHAY 237
Query: 234 QDIDAKDKAKLNRLKGELESAVKELEECNCKLAALRAERDVTKGAFFPVLNLGNKHVAGD 293
+ D+++L LKG+LE ELEE KL L+ ++D + N ++ +
Sbjct: 238 ISSHSTDQSELKHLKGQLEEIKAELEENRRKLITLKMQKDAACEGHVTSPAIANGSLSPE 297
Query: 294 RVRDEQRDLRDMESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLKSVKCLSSS 353
+ D+ + LR+++ E+ A +L EL+ + + + +Q +++N L + + SS
Sbjct: 298 KPIDKTK-LRELKDSIDEIKIMAEGRLSELQAAQEYNLSLSRQCQDIENELTDDQHIYSS 356
Query: 354 KAFLSVKNQLEKSKSEVFKYQALFEKLQVEKDNLAWRETELNMKIDLVDVFRRSSAVTDS 413
+ + + +++ +E+ +Y+ L E +Q E+ + RE ELN++ + ++ S S
Sbjct: 357 RLYSLINDRIHHWNAELDRYKILTEAIQAERSFVMRREKELNLRAESLEAANHKSTTVGS 416
Query: 414 KIADLGIEIQKQIDEKNRIEMRLEEASREPGRKEIIAEFRALVSSFPEDMSAMQRQLSKY 473
+I L ++Q I EKN +E+ EEA ++ R++I +EF A+ S+ ++M M+ QL ++
Sbjct: 417 RIEVLEKKLQSCIVEKNGLELETEEAIQDSERQDIKSEFIAMASTLSKEMEMMEAQLKRW 476
Query: 474 KEAALDIHILRADVLSLTNVLERKVKECETLLASSADQVAEIHKLQAMVQDLTDSNLELK 533
K+ A D LR SL L K E + L A Q+AEI L+A+++ L LEL+
Sbjct: 477 KDTAHDALYLREQAQSLRVSLSNKADEQKGLEDKCAKQMAEIKSLKALIEKLLKEKLELQ 536
Query: 534 LILDMYRRESTDSR 547
+ + RE D R
Sbjct: 537 NLASICTRECNDER 550
>gi|20196921|gb|AAM14834.1| unknown protein [Arabidopsis thaliana]
Length = 518
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 100/169 (59%), Positives = 127/169 (75%)
Query: 379 KLQVEKDNLAWRETELNMKIDLVDVFRRSSAVTDSKIADLGIEIQKQIDEKNRIEMRLEE 438
K QVEKD++ W+E E+N+K +L DV R++SAVTDS++A L EIQKQ+DEK RI+ RL
Sbjct: 20 KFQVEKDSIVWKEREINIKNELGDVSRKTSAVTDSRMASLDSEIQKQLDEKMRIKTRLGN 79
Query: 439 ASREPGRKEIIAEFRALVSSFPEDMSAMQRQLSKYKEAALDIHILRADVLSLTNVLERKV 498
SRE GRKEI A+ +AL+SSFPE+MS+M+ QL+ YKE A IH LRADV SL+ VL RK
Sbjct: 80 ISRERGRKEIFADMKALISSFPEEMSSMRSQLNNYKETAGGIHSLRADVQSLSGVLCRKT 139
Query: 499 KECETLLASSADQVAEIHKLQAMVQDLTDSNLELKLILDMYRRESTDSR 547
KE E L SAD +++ L A V DL +S+ ELKL LDMY+RESTD+R
Sbjct: 140 KEYEALQLRSADYASQLGDLNATVCDLKNSHEELKLFLDMYKRESTDAR 188
>gi|12323176|gb|AAG51572.1|AC027034_18 unknown protein; 71207-66119 [Arabidopsis thaliana]
Length = 899
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 155/573 (27%), Positives = 285/573 (49%), Gaps = 36/573 (6%)
Query: 4 TGEPDRKRRHF-SSISPTAATAKKNPFFPSSE-------------------EKKIDTAVL 43
+ EP +K+ H S+SP + +P P ++ E +D VL
Sbjct: 6 SDEPMQKKPHLLDSVSPNSMARNSSPSHPIAKSVSFFDCDFSLLCLRLVDYEIDVDATVL 65
Query: 44 QFQNQKLVQKLETQKVEYSALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRA 103
Q QNQKLVQ+L+ QK + +E+K +L+ Q YD L VN+ W +L+ DL +RA
Sbjct: 66 QLQNQKLVQQLDLQKKQLYDVESKIQELQLNQTSYDDELISVNQLWNQLVDDLILLGVRA 125
Query: 104 RESSNGQESRCLSIIED--VTPHPSHDAFLSRLMETGATESSSADNCPNQMEEDRETGIP 161
+N + L I++ V P + + FL RL++ + ++S +D ++EE +
Sbjct: 126 --GANQEALNYLDIVDKKRVPPCAADETFLCRLLQVDSLDTSKSDEVVRKVEE----ALA 179
Query: 162 RTKNIVSNILAAVDNLWHLKGGLYAAVLKDLQDGGSKQKASSNLQS-------EVKNLRL 214
+ ++ +N + ++ + L S + A+ L S E KNLR
Sbjct: 180 LRHSSTMELMGLFENTIDTQKTKAESISQSLHAVKSTEDATIQLSSINDLMKEESKNLRE 239
Query: 215 ALMDLHLKHKSLTRELQSRQDIDAKDKAKLNRLKGELESAVKELEECNCKLAALRAERDV 274
+ LH++HK + ++Q+ + D+++L LKG+LE ELEE KL L+ ++D
Sbjct: 240 MIDALHVRHKEHSEQIQAYISSHSTDQSELKHLKGQLEEIKAELEENRRKLITLKMQKDA 299
Query: 275 TKGAFFPVLNLGNKHVAGDRVRDEQRDLRDMESVHKELMDQASHQLLELKGLHDGRIKVL 334
+ N ++ ++ D+ + LR+++ E+ A +L EL+ + + +
Sbjct: 300 ACEGHVTSPAIANGSLSPEKPVDKTK-LRELKDSIDEIKIMAEGRLSELQASQEYNLSLS 358
Query: 335 QQLYNLQNTLKSVKCLSSSKAFLSVKNQLEKSKSEVFKYQALFEKLQVEKDNLAWRETEL 394
+Q +++N LK + + SS+ + + +++ +E+ +Y+ L E +Q E+ + R+ EL
Sbjct: 359 RQCQDIENELKDDQYIYSSRLYSLINDRIHHWNAELDRYKILTEAIQAERSFVMRRDKEL 418
Query: 395 NMKIDLVDVFRRSSAVTDSKIADLGIEIQKQIDEKNRIEMRLEEASREPGRKEIIAEFRA 454
N++ + ++ + S+I L ++Q I EKN +E+ EEA ++ R++I +EF A
Sbjct: 419 NLRAESLEAANHKTTTVGSRIEVLEKKLQSCIIEKNGLELETEEAIQDSERQDIKSEFIA 478
Query: 455 LVSSFPEDMSAMQRQLSKYKEAALDIHILRADVLSLTNVLERKVKECETLLASSADQVAE 514
+ S+ ++M M+ QL ++K+ A D LR SL L K E + L A Q+AE
Sbjct: 479 MASTLSKEMEMMEAQLKRWKDTAQDALYLREQAQSLRVSLSNKADEQKGLEDKCAKQMAE 538
Query: 515 IHKLQAMVQDLTDSNLELKLILDMYRRESTDSR 547
I L+A+++ L L+L+ + + RE D R
Sbjct: 539 IKSLKALIEKLLKEKLQLQNLASICTRECNDDR 571
>gi|240254270|ref|NP_564680.4| E3 ubiquitin-protein ligase BRE1-like 2 [Arabidopsis thaliana]
gi|257051000|sp|Q9C895.2|BRE1B_ARATH RecName: Full=E3 ubiquitin-protein ligase BRE1-like 2; AltName:
Full=Protein HISTONE MONOUBIQUITINATION 2; Short=AtHUB2
gi|332195089|gb|AEE33210.1| E3 ubiquitin-protein ligase BRE1-like 2 [Arabidopsis thaliana]
Length = 900
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 155/573 (27%), Positives = 285/573 (49%), Gaps = 36/573 (6%)
Query: 4 TGEPDRKRRHF-SSISPTAATAKKNPFFPSSE-------------------EKKIDTAVL 43
+ EP +K+ H S+SP + +P P ++ E +D VL
Sbjct: 6 SDEPMQKKPHLLDSVSPNSMARNSSPSHPIAKSVSFFDCDFSLLCLRLVDYEIDVDATVL 65
Query: 44 QFQNQKLVQKLETQKVEYSALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRA 103
Q QNQKLVQ+L+ QK + +E+K +L+ Q YD L VN+ W +L+ DL +RA
Sbjct: 66 QLQNQKLVQQLDLQKKQLYDVESKIQELQLNQTSYDDELISVNQLWNQLVDDLILLGVRA 125
Query: 104 RESSNGQESRCLSIIED--VTPHPSHDAFLSRLMETGATESSSADNCPNQMEEDRETGIP 161
+N + L I++ V P + + FL RL++ + ++S +D ++EE +
Sbjct: 126 --GANQEALNYLDIVDKKRVPPCAADETFLCRLLQVDSLDTSKSDEVVRKVEE----ALA 179
Query: 162 RTKNIVSNILAAVDNLWHLKGGLYAAVLKDLQDGGSKQKASSNLQS-------EVKNLRL 214
+ ++ +N + ++ + L S + A+ L S E KNLR
Sbjct: 180 LRHSSTMELMGLFENTIDTQKTKAESISQSLHAVKSTEDATIQLSSINDLMKEESKNLRE 239
Query: 215 ALMDLHLKHKSLTRELQSRQDIDAKDKAKLNRLKGELESAVKELEECNCKLAALRAERDV 274
+ LH++HK + ++Q+ + D+++L LKG+LE ELEE KL L+ ++D
Sbjct: 240 MIDALHVRHKEHSEQIQAYISSHSTDQSELKHLKGQLEEIKAELEENRRKLITLKMQKDA 299
Query: 275 TKGAFFPVLNLGNKHVAGDRVRDEQRDLRDMESVHKELMDQASHQLLELKGLHDGRIKVL 334
+ N ++ ++ D+ + LR+++ E+ A +L EL+ + + +
Sbjct: 300 ACEGHVTSPAIANGSLSPEKPVDKTK-LRELKDSIDEIKIMAEGRLSELQASQEYNLSLS 358
Query: 335 QQLYNLQNTLKSVKCLSSSKAFLSVKNQLEKSKSEVFKYQALFEKLQVEKDNLAWRETEL 394
+Q +++N LK + + SS+ + + +++ +E+ +Y+ L E +Q E+ + R+ EL
Sbjct: 359 RQCQDIENELKDDQYIYSSRLYSLINDRIHHWNAELDRYKILTEAIQAERSFVMRRDKEL 418
Query: 395 NMKIDLVDVFRRSSAVTDSKIADLGIEIQKQIDEKNRIEMRLEEASREPGRKEIIAEFRA 454
N++ + ++ + S+I L ++Q I EKN +E+ EEA ++ R++I +EF A
Sbjct: 419 NLRAESLEAANHKTTTVGSRIEVLEKKLQSCIIEKNGLELETEEAIQDSERQDIKSEFIA 478
Query: 455 LVSSFPEDMSAMQRQLSKYKEAALDIHILRADVLSLTNVLERKVKECETLLASSADQVAE 514
+ S+ ++M M+ QL ++K+ A D LR SL L K E + L A Q+AE
Sbjct: 479 MASTLSKEMEMMEAQLKRWKDTAQDALYLREQAQSLRVSLSNKADEQKGLEDKCAKQMAE 538
Query: 515 IHKLQAMVQDLTDSNLELKLILDMYRRESTDSR 547
I L+A+++ L L+L+ + + RE D R
Sbjct: 539 IKSLKALIEKLLKEKLQLQNLASICTRECNDDR 571
>gi|334183329|ref|NP_001185233.1| E3 ubiquitin-protein ligase BRE1-like 2 [Arabidopsis thaliana]
gi|332195091|gb|AEE33212.1| E3 ubiquitin-protein ligase BRE1-like 2 [Arabidopsis thaliana]
Length = 899
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 153/560 (27%), Positives = 284/560 (50%), Gaps = 25/560 (4%)
Query: 4 TGEPDRKRRHF-SSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEYS 62
+ EP +K+ H S+SP + +P P + K +D VLQ QNQKLVQ+L+ QK +
Sbjct: 6 SDEPMQKKPHLLDSVSPNSMARNSSPSHPIA--KSVDATVLQLQNQKLVQQLDLQKKQLY 63
Query: 63 ALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSNGQESRCLSIIE--- 119
+E+K +L+ Q YD L VN+ W +L+ DL +RA +N + L I++
Sbjct: 64 DVESKIQELQLNQTSYDDELISVNQLWNQLVDDLILLGVRA--GANQEALNYLDIVDKKR 121
Query: 120 -DVTPHPSHDAFLSRLMETGATESSSADNCPNQMEEDRETGIPRTKNIVSNILAAVDNLW 178
V P + + FL RL++ + ++S +D ++EE + + ++ +N
Sbjct: 122 GSVPPCAADETFLCRLLQVDSLDTSKSDEVVRKVEE----ALALRHSSTMELMGLFENTI 177
Query: 179 HLKGGLYAAVLKDLQDGGSKQKASSNLQS-------EVKNLRLALMDLHLKHKSLTRELQ 231
+ ++ + L S + A+ L S E KNLR + LH++HK + ++Q
Sbjct: 178 DTQKTKAESISQSLHAVKSTEDATIQLSSINDLMKEESKNLREMIDALHVRHKEHSEQIQ 237
Query: 232 SRQDIDAKDKAKLNRLKGELESAVKELEECNCKLAALRAERDVTKGAFFPVLNLGNKHVA 291
+ + D+++L LKG+LE ELEE KL L+ ++D + N ++
Sbjct: 238 AYISSHSTDQSELKHLKGQLEEIKAELEENRRKLITLKMQKDAACEGHVTSPAIANGSLS 297
Query: 292 GDRVRDEQRDLRDMESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLKSVKCLS 351
++ D+ + LR+++ E+ A +L EL+ + + + +Q +++N LK + +
Sbjct: 298 PEKPVDKTK-LRELKDSIDEIKIMAEGRLSELQASQEYNLSLSRQCQDIENELKDDQYIY 356
Query: 352 SSKAFLSVKNQLEKSKSEVFKYQALFEKLQVEKDNLAWRETELNMKIDLVDVFRRSSAVT 411
SS+ + + +++ +E+ +Y+ L E +Q E+ + R+ ELN++ + ++ +
Sbjct: 357 SSRLYSLINDRIHHWNAELDRYKILTEAIQAERSFVMRRDKELNLRAESLEAANHKTTTV 416
Query: 412 DSKIADLGIEIQKQIDEKNRIEMRLEEASREPGRKEIIAEFRALVSSFPEDMSAMQRQLS 471
S+I L ++Q I EKN +E+ EEA ++ R++I +EF A+ S+ ++M M+ QL
Sbjct: 417 GSRIEVLEKKLQSCIIEKNGLELETEEAIQDSERQDIKSEFIAMASTLSKEMEMMEAQLK 476
Query: 472 KYKEAALDIHILRADVLSL----TNVLERKVKECETLLASSADQVAEIHKLQAMVQDLTD 527
++K+ A D LR SL + + E + L A Q+AEI L+A+++ L
Sbjct: 477 RWKDTAQDALYLREQAQSLRVSAKTLSNLQSYEQKGLEDKCAKQMAEIKSLKALIEKLLK 536
Query: 528 SNLELKLILDMYRRESTDSR 547
L+L+ + + RE D R
Sbjct: 537 EKLQLQNLASICTRECNDDR 556
>gi|358346882|ref|XP_003637493.1| E3 ubiquitin-protein ligase BRE1-like protein [Medicago truncatula]
gi|355503428|gb|AES84631.1| E3 ubiquitin-protein ligase BRE1-like protein [Medicago truncatula]
Length = 883
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 162/543 (29%), Positives = 277/543 (51%), Gaps = 12/543 (2%)
Query: 6 EPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEYSALE 65
EP+ K+ H ++P ++ N S K D +LQ QNQ+LVQ+ ETQK LE
Sbjct: 8 EPNNKKPHL--LTPVSSRVSPNSTNHSPNGKNADAGLLQLQNQQLVQQTETQKHALQDLE 65
Query: 66 NKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSNGQES-RCLSIIEDVTP- 123
K +LKERQ YD L +N+ W++L+ D+ ++A + E+ L ++ P
Sbjct: 66 EKTRELKERQNSYDDILIAINQRWDQLVDDMAFLGIQAGRGKDSLETLDYLDNLQGSLPS 125
Query: 124 -HPSHDAFLSRLMETGATESSSADNCPNQMEEDRETGIPRTKNIVSNILAAVDNLWHLKG 182
HP D L RL++ + E SS D N +EE T+ ++ I VD+
Sbjct: 126 CHPD-DLLLCRLIQKDSIEGSSNDEITNYVEEALALRRLSTRELLKLIQDTVDDQMERIE 184
Query: 183 GLYAAVLKDLQDGG---SKQKASSNLQSEVKNLRLALMDLHLKHKSLTRELQSRQDIDAK 239
+ + DL K + E N R + LH KHK T +Q+ ++
Sbjct: 185 DIGQVLQGDLSTEDVIIQISKIDDMTKKEADNFREVIDTLHAKHKEYTVGIQNYITECSQ 244
Query: 240 DKAKLNRLKGELESAVKELEECNCKLAALRAERDVTKGAFFPVLNLGNKHVAGDRVRDEQ 299
D++ + RL GEL+ V ELEE K+ +L+ ++D G + N +++ ++ D
Sbjct: 245 DQSDIKRLTGELDEIVAELEESRRKIVSLKMQKDAAMGMNSSNADSLNGNLSPEKPADRA 304
Query: 300 RDLRDMESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLKSVKCLSSSKAFLSV 359
L +++ +E + +L EL+ + + ++ LQN L K + +S+ +
Sbjct: 305 MGLSELKHSIEEAKIVNADRLSELQDAREENQILTKKFQELQNELNDDKYVRNSRVYSLA 364
Query: 360 KNQLEKSKSEVFKYQALFEKLQVEKDNLAWRETELNMKIDLVDVFRRSSAVTDSKIADLG 419
+QL+ +E+ +Y++L E LQ + N++ RE EL +K++ R +DS+I +L
Sbjct: 365 NDQLQHWIAELDRYKSLAESLQAGRVNVSKREKELKLKLESAVNARHIHDNSDSRIDELK 424
Query: 420 IEIQKQIDEKNRIEMRLEEASREPG--RKEIIAEFRALVSSFPEDMSAMQRQLSKYKEAA 477
+++QK I EKN +E+ +EEA ++ G RK+I AEFR + S+ ++M M Q+ ++K+AA
Sbjct: 425 LQLQKCIIEKNDLEITMEEAKQDTGLRRKDIKAEFRVMASALSKEMGMMDAQVKRWKDAA 484
Query: 478 LDIHILRADVLSLTNVLE-RKVKECETLLASSADQVAEIHKLQAMVQDLTDSNLELKLIL 536
L+ LR SL L ++ E ++ A+QV E+ +A+++ L + N EL+ +L
Sbjct: 485 LEAVSLREKAHSLREKLSGKQTSELKSFANKCAEQVLEMKSSKALIEKLQEENRELEFVL 544
Query: 537 DMY 539
DMY
Sbjct: 545 DMY 547
>gi|388513575|gb|AFK44849.1| unknown [Lotus japonicus]
Length = 163
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 96/157 (61%), Positives = 113/157 (71%), Gaps = 3/157 (1%)
Query: 1 MGSTGEPDRKRRHFSSISPTAATAKKN---PFFPSSEEKKIDTAVLQFQNQKLVQKLETQ 57
MGS G+ DRKRRHFSS+SPT A A PF P SE+KK+D AVLQ+QNQKL+QKLETQ
Sbjct: 1 MGSMGDSDRKRRHFSSLSPTPAAAATAKKLPFLPISEDKKLDIAVLQYQNQKLLQKLETQ 60
Query: 58 KVEYSALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSNGQESRCLSI 117
K+EY+ALENK +QL E Q YDS L VV KSWE+++ DLES S RESS +SR S+
Sbjct: 61 KLEYAALENKLSQLNESQHSYDSALTVVKKSWEQMVNDLESSSEGTRESSCKSDSRFASV 120
Query: 118 IEDVTPHPSHDAFLSRLMETGATESSSADNCPNQMEE 154
+ D + D FLSRLM+TGATESSS NQMEE
Sbjct: 121 MNDCSSSTVQDVFLSRLMQTGATESSSTYRFANQMEE 157
>gi|414867210|tpg|DAA45767.1| TPA: hypothetical protein ZEAMMB73_620612 [Zea mays]
Length = 887
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 157/547 (28%), Positives = 274/547 (50%), Gaps = 66/547 (12%)
Query: 38 IDTAVLQFQNQKLVQKLETQKVEYSALENKFAQLKERQQPYDSTLKVVNKSWEELITDLE 97
+D+ LQ++NQKLVQ+LE QK E ALE KF +L + Q YD TL +NK W +LI DL
Sbjct: 45 MDSTALQYENQKLVQQLEVQKSEMHALERKFKELSDDQCSYDKTLISLNKLWNQLIDDLV 104
Query: 98 SCSMRARESSNGQESRCLSIIEDVTPH-------PSHDAFLSRLMETGATESSSADNCPN 150
+RA G + L ++ PS + FL RL++T N
Sbjct: 105 LLGVRA-----GGDLDNLQALDHEELSEESLESCPSEEIFLLRLLKT------------N 147
Query: 151 QMEEDRETGIPRTKNIVSNILAAVDNLWHLKGGLYAAVLKDLQDGGSKQKASSN------ 204
+ ++ +T ++L V+ + ++K LQ+ S Q+A S
Sbjct: 148 NIRDNSDT----------SLLKFVEEALAFRSSATVTLMKSLQETISSQQARSESLSLAL 197
Query: 205 -------------------LQSEVKNLRLALMDLHLKHKSLTRELQSRQDIDAKDKAKLN 245
L+ +N A+ ++ KHK E+++ + +++ ++
Sbjct: 198 NGQKSNEDVIVALRNHNDCLKEVAENASQAISIINEKHKRYLDEIEAFKSNHSRELQEIK 257
Query: 246 RLKGELESAVKELEECNCKLAALRAER--DVTKGAFFPVLNLG-NKHVAGDRVRDEQRDL 302
R+ GELE ++ ELEE KL L+ +R V + +N G + H + D+ Q DL
Sbjct: 258 RISGELEESIAELEESQRKLVVLQLQRHGSVMDASGANAVNGGISTHKSSDKSMSWQ-DL 316
Query: 303 RDMESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLKSVKCLSSSKAFLSVKNQ 362
+D K L A ++LLEL + + + ++L +L+ LK K + SK ++ + ++
Sbjct: 317 KDAVDAAKTL---AGNRLLELHQTQEDNLILSKELGDLEGQLKDEKYVLVSKPYMILNDK 373
Query: 363 LEKSKSEVFKYQALFEKLQVEKDNLAWRETELNMKIDLVDVFRRSSAVTDSKIADLGIEI 422
L+ +E+ +Y+ L E LQ +KD L RE E++ K + +D +++ + KI +L +I
Sbjct: 374 LQHLNAEIERYRGLVEVLQNDKDQLMQREKEISAKAESLDSVKQTIITYEKKIEELETQI 433
Query: 423 QKQIDEKNRIEMRLEEASREPGRKEIIAEFRALVSSFPEDMSAMQRQLSKYKEAALDIHI 482
Q EKN +E ++EE ++ G+K+ E + ++ ++ M+ QLS+ K+AA +
Sbjct: 434 QILFSEKNDLETKVEETLQDSGKKDFKNEIHVMAAALSNELGMMENQLSRSKDAASEALA 493
Query: 483 LRADVLSLTNVLERKVKECETLLASSADQVAEIHKLQAMVQDLTDSNLELKLILDMYRRE 542
LR SL +++ +K++E + + QV EI L+A+V++L EL+ I DMY +E
Sbjct: 494 LREQAESLRSLVAKKIEEHKKISDKYNSQVIEIKSLKALVEELEQEKQELEFIADMYVKE 553
Query: 543 STDSRFV 549
S++SR +
Sbjct: 554 SSESRTI 560
>gi|414867209|tpg|DAA45766.1| TPA: hypothetical protein ZEAMMB73_620612 [Zea mays]
Length = 881
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 155/547 (28%), Positives = 271/547 (49%), Gaps = 72/547 (13%)
Query: 38 IDTAVLQFQNQKLVQKLETQKVEYSALENKFAQLKERQQPYDSTLKVVNKSWEELITDLE 97
+D+ LQ++NQKLVQ+LE QK E ALE KF +L + Q YD TL +NK W +LI DL
Sbjct: 45 MDSTALQYENQKLVQQLEVQKSEMHALERKFKELSDDQCSYDKTLISLNKLWNQLIDDLV 104
Query: 98 SCSMRARESSNGQESRCLSIIEDVTPH-------PSHDAFLSRLMETGATESSSADNCPN 150
+RA G + L ++ PS + FL RL++T N
Sbjct: 105 LLGVRA-----GGDLDNLQALDHEELSEESLESCPSEEIFLLRLLKT------------N 147
Query: 151 QMEEDRETGIPRTKNIVSNILAAVDNLWHLKGGLYAAVLKDLQDGGSKQKASSN------ 204
+ ++ +T ++L V+ + ++K LQ+ S Q+A S
Sbjct: 148 NIRDNSDT----------SLLKFVEEALAFRSSATVTLMKSLQETISSQQARSESLSLAL 197
Query: 205 -------------------LQSEVKNLRLALMDLHLKHKSLTRELQSRQDIDAKDKAKLN 245
L+ +N A+ ++ KHK E+++ + +++ ++
Sbjct: 198 NGQKSNEDVIVALRNHNDCLKEVAENASQAISIINEKHKRYLDEIEAFKSNHSRELQEIK 257
Query: 246 RLKGELESAVKELEECNCKLAALRAER--DVTKGAFFPVLNLG-NKHVAGDRVRDEQRDL 302
R+ GELE ++ ELEE KL L+ +R V + +N G + H + D+ Q DL
Sbjct: 258 RISGELEESIAELEESQRKLVVLQLQRHGSVMDASGANAVNGGISTHKSSDKSMSWQ-DL 316
Query: 303 RDMESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLKSVKCLSSSKAFLSVKNQ 362
+D K L A ++LLEL + + + ++L +L+ LK K + SK ++ + ++
Sbjct: 317 KDAVDAAKTL---AGNRLLELHQTQEDNLILSKELGDLEGQLKDEKYVLVSKPYMILNDK 373
Query: 363 LEKSKSEVFKYQALFEKLQVEKDNLAWRETELNMKIDLVDVFRRSSAVTDSKIADLGIEI 422
L+ +E+ +Y+ L E LQ +KD L RE E++ K + +D +++ + KI +L +I
Sbjct: 374 LQHLNAEIERYRGLVEVLQNDKDQLMQREKEISAKAESLDSVKQTIITYEKKIEELETQI 433
Query: 423 QKQIDEKNRIEMRLEEASREPGRKEIIAEFRALVSSFPEDMSAMQRQLSKYKEAALDIHI 482
Q EKN +E ++EE ++ G+K+ E + ++ ++ M+ QLS+ K+AA +
Sbjct: 434 QILFSEKNDLETKVEETLQDSGKKDFKNEIHVMAAALSNELGMMENQLSRSKDAASEALA 493
Query: 483 LRADVLSLTNVLERKVKECETLLASSADQVAEIHKLQAMVQDLTDSNLELKLILDMYRRE 542
LR SL +++ +K++E + + QV EI L+A+ + EL+ I DMY +E
Sbjct: 494 LREQAESLRSLVAKKIEEHKKISDKYNSQVIEIKSLKALEKQ------ELEFIADMYVKE 547
Query: 543 STDSRFV 549
S++SR +
Sbjct: 548 SSESRTI 554
>gi|255541120|ref|XP_002511624.1| protein binding protein, putative [Ricinus communis]
gi|223548804|gb|EEF50293.1| protein binding protein, putative [Ricinus communis]
Length = 462
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 86/118 (72%), Positives = 96/118 (81%)
Query: 432 IEMRLEEASREPGRKEIIAEFRALVSSFPEDMSAMQRQLSKYKEAALDIHILRADVLSLT 491
IE +LEEASREPGRKEIIAEF+ALVSSFPEDM MQRQLS YKEAA DIH L+ADV SL+
Sbjct: 2 IEAKLEEASREPGRKEIIAEFKALVSSFPEDMGNMQRQLSNYKEAASDIHSLQADVQSLS 61
Query: 492 NVLERKVKECETLLASSADQVAEIHKLQAMVQDLTDSNLELKLILDMYRRESTDSRFV 549
VL+RKVKECE+L S +QV EI KLQ +VQDL +S+ ELKLI MYR ESTD R V
Sbjct: 62 TVLDRKVKECESLSTRSNNQVTEIQKLQRVVQDLNESDWELKLIRKMYRHESTDLREV 119
>gi|78709023|gb|ABB47998.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
Length = 821
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 146/518 (28%), Positives = 255/518 (49%), Gaps = 49/518 (9%)
Query: 63 ALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSNGQES--RCLSIIED 120
ALE KF +L++ Q YD+TL +NK W +LI DL +RA NG ++ E
Sbjct: 3 ALEGKFKELRDEQCSYDNTLICLNKMWNQLIDDLVLLGVRAGGDLNGLQALDHEEMSEES 62
Query: 121 VTPHPSHDAFLSRLMETGATESSSADNCPNQMEEDRETGIPRTKNIVSNILAAVDNLWHL 180
+ PS + FL RL+ ++ N N N S++ V+ L
Sbjct: 63 LESCPSEEIFLFRLL--------NSRNFRN--------------NDDSSLSKLVEEALAL 100
Query: 181 KGGLYAAVLKDLQDGGSKQKASSN-------------------------LQSEVKNLRLA 215
+ ++K LQ+ + Q+A S L+ V NLR A
Sbjct: 101 RYSTTVTLMKSLQEAFAVQQARSESLSLALNGQNSSEDVIVALENHNDYLKEVVDNLRQA 160
Query: 216 LMDLHLKHKSLTRELQSRQDIDAKDKAKLNRLKGELESAVKELEECNCKLAALRAERDVT 275
+ ++ KH+ E+++ ++ +++ ++ L GELE ++ ELEE KLA L+ +
Sbjct: 161 VSIINRKHEKYLDEIEAFKNNQSRELHEVKCLSGELEESMAELEESRRKLAVLQLQTGGG 220
Query: 276 KGAFFPVLNLGNKHVAGDRVRDEQRDLRDMESVHKELMDQASHQLLELKGLHDGRIKVLQ 335
N N V+ D+ D+ RD++ +E A+++L EL + + + +
Sbjct: 221 SLMNTSAPNGVNGSVSTDKSSDKGMGWRDLKDAVEEAKTLAANRLFELHETQEDNLILSK 280
Query: 336 QLYNLQNTLKSVKCLSSSKAFLSVKNQLEKSKSEVFKYQALFEKLQVEKDNLAWRETELN 395
QL ++Q+ LK + +SK + + +QL +E+ +Y+ L E LQ EKD L +E E+
Sbjct: 281 QLEDIQDQLKDENYIVTSKPYTILSDQLHHLNAEIERYRGLVEVLQNEKDQLMQKEEEML 340
Query: 396 MKIDLVDVFRRSSAVTDSKIADLGIEIQKQIDEKNRIEMRLEEASREPGRKEIIAEFRAL 455
K + VD ++S +KI DL EIQK + EKN +E++ EEA ++ G+K+ E +
Sbjct: 341 AKAESVDAVQQSITTYKAKIEDLEHEIQKLMAEKNDLEIKAEEALQDSGKKDFKDEIHVM 400
Query: 456 VSSFPEDMSAMQRQLSKYKEAALDIHILRADVLSLTNVLERKVKECETLLASSADQVAEI 515
+S ++M + Q+++ K+AA + LR + L +L +K+ E + + QV EI
Sbjct: 401 AASLSKEMELLDNQMNRSKDAASEALALREEADYLRTLLAKKIDEQKEISDRYNTQVTEI 460
Query: 516 HKLQAMVQDLTDSNLELKLILDMYRRESTDSRFVNLLE 553
L+A+++ L EL+ I+DM +E ++SR ++ +E
Sbjct: 461 KSLKALIETLDQEKQELQFIVDMLGKECSESRAISEIE 498
>gi|414867207|tpg|DAA45764.1| TPA: hypothetical protein ZEAMMB73_620612 [Zea mays]
Length = 551
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 146/520 (28%), Positives = 256/520 (49%), Gaps = 66/520 (12%)
Query: 38 IDTAVLQFQNQKLVQKLETQKVEYSALENKFAQLKERQQPYDSTLKVVNKSWEELITDLE 97
+D+ LQ++NQKLVQ+LE QK E ALE KF +L + Q YD TL +NK W +LI DL
Sbjct: 45 MDSTALQYENQKLVQQLEVQKSEMHALERKFKELSDDQCSYDKTLISLNKLWNQLIDDLV 104
Query: 98 SCSMRARESSNGQESRCLSIIEDVTPH-------PSHDAFLSRLMETGATESSSADNCPN 150
+RA G + L ++ PS + FL RL++T N
Sbjct: 105 LLGVRA-----GGDLDNLQALDHEELSEESLESCPSEEIFLLRLLKT------------N 147
Query: 151 QMEEDRETGIPRTKNIVSNILAAVDNLWHLKGGLYAAVLKDLQDGGSKQKASSN------ 204
+ ++ +T ++L V+ + ++K LQ+ S Q+A S
Sbjct: 148 NIRDNSDT----------SLLKFVEEALAFRSSATVTLMKSLQETISSQQARSESLSLAL 197
Query: 205 -------------------LQSEVKNLRLALMDLHLKHKSLTRELQSRQDIDAKDKAKLN 245
L+ +N A+ ++ KHK E+++ + +++ ++
Sbjct: 198 NGQKSNEDVIVALRNHNDCLKEVAENASQAISIINEKHKRYLDEIEAFKSNHSRELQEIK 257
Query: 246 RLKGELESAVKELEECNCKLAALRAER--DVTKGAFFPVLNLG-NKHVAGDRVRDEQRDL 302
R+ GELE ++ ELEE KL L+ +R V + +N G + H + D+ Q DL
Sbjct: 258 RISGELEESIAELEESQRKLVVLQLQRHGSVMDASGANAVNGGISTHKSSDKSMSWQ-DL 316
Query: 303 RDMESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLKSVKCLSSSKAFLSVKNQ 362
+D K L A ++LLEL + + + ++L +L+ LK K + SK ++ + ++
Sbjct: 317 KDAVDAAKTL---AGNRLLELHQTQEDNLILSKELGDLEGQLKDEKYVLVSKPYMILNDK 373
Query: 363 LEKSKSEVFKYQALFEKLQVEKDNLAWRETELNMKIDLVDVFRRSSAVTDSKIADLGIEI 422
L+ +E+ +Y+ L E LQ +KD L RE E++ K + +D +++ + KI +L +I
Sbjct: 374 LQHLNAEIERYRGLVEVLQNDKDQLMQREKEISAKAESLDSVKQTIITYEKKIEELETQI 433
Query: 423 QKQIDEKNRIEMRLEEASREPGRKEIIAEFRALVSSFPEDMSAMQRQLSKYKEAALDIHI 482
Q EKN +E ++EE ++ G+K+ E + ++ ++ M+ QLS+ K+AA +
Sbjct: 434 QILFSEKNDLETKVEETLQDSGKKDFKNEIHVMAAALSNELGMMENQLSRSKDAASEALA 493
Query: 483 LRADVLSLTNVLERKVKECETLLASSADQVAEIHKLQAMV 522
LR SL +++ +K++E + + QV EI L+A+V
Sbjct: 494 LREQAESLRSLVAKKIEEHKKISDKYNSQVIEIKSLKALV 533
>gi|414867208|tpg|DAA45765.1| TPA: hypothetical protein ZEAMMB73_620612 [Zea mays]
Length = 535
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 145/519 (27%), Positives = 255/519 (49%), Gaps = 66/519 (12%)
Query: 38 IDTAVLQFQNQKLVQKLETQKVEYSALENKFAQLKERQQPYDSTLKVVNKSWEELITDLE 97
+D+ LQ++NQKLVQ+LE QK E ALE KF +L + Q YD TL +NK W +LI DL
Sbjct: 45 MDSTALQYENQKLVQQLEVQKSEMHALERKFKELSDDQCSYDKTLISLNKLWNQLIDDLV 104
Query: 98 SCSMRARESSNGQESRCLSIIEDVTPH-------PSHDAFLSRLMETGATESSSADNCPN 150
+RA G + L ++ PS + FL RL++T N
Sbjct: 105 LLGVRA-----GGDLDNLQALDHEELSEESLESCPSEEIFLLRLLKT------------N 147
Query: 151 QMEEDRETGIPRTKNIVSNILAAVDNLWHLKGGLYAAVLKDLQDGGSKQKASSN------ 204
+ ++ +T ++L V+ + ++K LQ+ S Q+A S
Sbjct: 148 NIRDNSDT----------SLLKFVEEALAFRSSATVTLMKSLQETISSQQARSESLSLAL 197
Query: 205 -------------------LQSEVKNLRLALMDLHLKHKSLTRELQSRQDIDAKDKAKLN 245
L+ +N A+ ++ KHK E+++ + +++ ++
Sbjct: 198 NGQKSNEDVIVALRNHNDCLKEVAENASQAISIINEKHKRYLDEIEAFKSNHSRELQEIK 257
Query: 246 RLKGELESAVKELEECNCKLAALRAER--DVTKGAFFPVLNLG-NKHVAGDRVRDEQRDL 302
R+ GELE ++ ELEE KL L+ +R V + +N G + H + D+ Q DL
Sbjct: 258 RISGELEESIAELEESQRKLVVLQLQRHGSVMDASGANAVNGGISTHKSSDKSMSWQ-DL 316
Query: 303 RDMESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLKSVKCLSSSKAFLSVKNQ 362
+D K L A ++LLEL + + + ++L +L+ LK K + SK ++ + ++
Sbjct: 317 KDAVDAAKTL---AGNRLLELHQTQEDNLILSKELGDLEGQLKDEKYVLVSKPYMILNDK 373
Query: 363 LEKSKSEVFKYQALFEKLQVEKDNLAWRETELNMKIDLVDVFRRSSAVTDSKIADLGIEI 422
L+ +E+ +Y+ L E LQ +KD L RE E++ K + +D +++ + KI +L +I
Sbjct: 374 LQHLNAEIERYRGLVEVLQNDKDQLMQREKEISAKAESLDSVKQTIITYEKKIEELETQI 433
Query: 423 QKQIDEKNRIEMRLEEASREPGRKEIIAEFRALVSSFPEDMSAMQRQLSKYKEAALDIHI 482
Q EKN +E ++EE ++ G+K+ E + ++ ++ M+ QLS+ K+AA +
Sbjct: 434 QILFSEKNDLETKVEETLQDSGKKDFKNEIHVMAAALSNELGMMENQLSRSKDAASEALA 493
Query: 483 LRADVLSLTNVLERKVKECETLLASSADQVAEIHKLQAM 521
LR SL +++ +K++E + + QV EI L+A+
Sbjct: 494 LREQAESLRSLVAKKIEEHKKISDKYNSQVIEIKSLKAL 532
>gi|242035493|ref|XP_002465141.1| hypothetical protein SORBIDRAFT_01g032700 [Sorghum bicolor]
gi|241918995|gb|EER92139.1| hypothetical protein SORBIDRAFT_01g032700 [Sorghum bicolor]
Length = 505
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 148/519 (28%), Positives = 255/519 (49%), Gaps = 66/519 (12%)
Query: 38 IDTAVLQFQNQKLVQKLETQKVEYSALENKFAQLKERQQPYDSTLKVVNKSWEELITDLE 97
+D+ LQ++NQKLVQ+LE QK E ALE KF +L++ Q YD TL +NK W +LI DL
Sbjct: 1 MDSTALQYENQKLVQQLEAQKSEMYALERKFKELRDEQCSYDKTLISLNKLWNQLIDDLV 60
Query: 98 SCSMRARESSNGQESRCLSIIEDVTPH-------PSHDAFLSRLMETGATESSSADNCPN 150
+RA G + L ++ PS + FL RL+++ S+ DN
Sbjct: 61 LLGVRA-----GGDLDNLQALDHEELSEESLESCPSEEIFLLRLLKS----SNIRDNSD- 110
Query: 151 QMEEDRETGIPRTKNIVSNILAAVDNLWHLKGGLYAAVLKDLQDGGSKQKASSNLQS--- 207
+++L V+ + ++K LQ+ S Q+A S L S
Sbjct: 111 -----------------TSLLEFVEEALAFRCSATITLMKSLQETISSQQAKSELLSLAL 153
Query: 208 ---------------------EV-KNLRLALMDLHLKHKSLTRELQSRQDIDAKDKAKLN 245
EV +N A+ ++ KHK E+++ + + + ++
Sbjct: 154 NAQKSNEDVIVALQNHNDCLKEVAENASQAISIINEKHKRYLDEIEAFKSNHSSELQEIK 213
Query: 246 RLKGELESAVKELEECNCKLAALRAER--DVTKGAFFPVLNLG-NKHVAGDRVRDEQRDL 302
R+ GELE + ELEE KL L+ +R V + +N G + H + D+ Q DL
Sbjct: 214 RISGELEESTAELEESRRKLVVLQLQRHGSVMDASGANAVNGGISTHKSSDKSMSWQ-DL 272
Query: 303 RDMESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLKSVKCLSSSKAFLSVKNQ 362
+D K L A ++LLEL + + + ++L +L+ L+ K + SK ++ + ++
Sbjct: 273 KDAVDAAKTL---AGNRLLELHQTQEDNLILSKELGDLEGQLRDEKYVLVSKPYMILNDK 329
Query: 363 LEKSKSEVFKYQALFEKLQVEKDNLAWRETELNMKIDLVDVFRRSSAVTDSKIADLGIEI 422
L+ +E+ +Y+ L E LQ +KD L RE E+ K + VD +++ ++KI +L +I
Sbjct: 330 LQHLNAEIDRYRGLVEVLQNDKDQLMQREKEICAKSESVDGIKQTITTYETKIEELETQI 389
Query: 423 QKQIDEKNRIEMRLEEASREPGRKEIIAEFRALVSSFPEDMSAMQRQLSKYKEAALDIHI 482
Q EKN +E ++EE ++ G+K+ E + ++ ++ M+ QLS+ K+AA +
Sbjct: 390 QILFSEKNDLETKVEETLQDSGKKDFKDEIHVMAAALSNELGMMENQLSRSKDAASEALA 449
Query: 483 LRADVLSLTNVLERKVKECETLLASSADQVAEIHKLQAM 521
LR SL +++ +K++E + + QV EI L+A+
Sbjct: 450 LREQAESLRSLVAKKIEEHKKISDKYNSQVIEIKSLKAL 488
>gi|414867211|tpg|DAA45768.1| TPA: hypothetical protein ZEAMMB73_620612 [Zea mays]
Length = 539
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 138/495 (27%), Positives = 242/495 (48%), Gaps = 66/495 (13%)
Query: 38 IDTAVLQFQNQKLVQKLETQKVEYSALENKFAQLKERQQPYDSTLKVVNKSWEELITDLE 97
+D+ LQ++NQKLVQ+LE QK E ALE KF +L + Q YD TL +NK W +LI DL
Sbjct: 45 MDSTALQYENQKLVQQLEVQKSEMHALERKFKELSDDQCSYDKTLISLNKLWNQLIDDLV 104
Query: 98 SCSMRARESSNGQESRCLSIIEDVTPH-------PSHDAFLSRLMETGATESSSADNCPN 150
+RA G + L ++ PS + FL RL++T N
Sbjct: 105 LLGVRA-----GGDLDNLQALDHEELSEESLESCPSEEIFLLRLLKT------------N 147
Query: 151 QMEEDRETGIPRTKNIVSNILAAVDNLWHLKGGLYAAVLKDLQDGGSKQKASSN------ 204
+ ++ +T ++L V+ + ++K LQ+ S Q+A S
Sbjct: 148 NIRDNSDT----------SLLKFVEEALAFRSSATVTLMKSLQETISSQQARSESLSLAL 197
Query: 205 -------------------LQSEVKNLRLALMDLHLKHKSLTRELQSRQDIDAKDKAKLN 245
L+ +N A+ ++ KHK E+++ + +++ ++
Sbjct: 198 NGQKSNEDVIVALRNHNDCLKEVAENASQAISIINEKHKRYLDEIEAFKSNHSRELQEIK 257
Query: 246 RLKGELESAVKELEECNCKLAALRAER--DVTKGAFFPVLNLG-NKHVAGDRVRDEQRDL 302
R+ GELE ++ ELEE KL L+ +R V + +N G + H + D+ Q DL
Sbjct: 258 RISGELEESIAELEESQRKLVVLQLQRHGSVMDASGANAVNGGISTHKSSDKSMSWQ-DL 316
Query: 303 RDMESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLKSVKCLSSSKAFLSVKNQ 362
+D K L A ++LLEL + + + ++L +L+ LK K + SK ++ + ++
Sbjct: 317 KDAVDAAKTL---AGNRLLELHQTQEDNLILSKELGDLEGQLKDEKYVLVSKPYMILNDK 373
Query: 363 LEKSKSEVFKYQALFEKLQVEKDNLAWRETELNMKIDLVDVFRRSSAVTDSKIADLGIEI 422
L+ +E+ +Y+ L E LQ +KD L RE E++ K + +D +++ + KI +L +I
Sbjct: 374 LQHLNAEIERYRGLVEVLQNDKDQLMQREKEISAKAESLDSVKQTIITYEKKIEELETQI 433
Query: 423 QKQIDEKNRIEMRLEEASREPGRKEIIAEFRALVSSFPEDMSAMQRQLSKYKEAALDIHI 482
Q EKN +E ++EE ++ G+K+ E + ++ ++ M+ QLS+ K+AA +
Sbjct: 434 QILFSEKNDLETKVEETLQDSGKKDFKNEIHVMAAALSNELGMMENQLSRSKDAASEALA 493
Query: 483 LRADVLSLTNVLERK 497
LR SL +++ +K
Sbjct: 494 LREQAESLRSLVAKK 508
>gi|18855010|gb|AAL79702.1|AC087599_21 unknown protein [Oryza sativa Japonica Group]
Length = 789
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 147/543 (27%), Positives = 251/543 (46%), Gaps = 104/543 (19%)
Query: 38 IDTAVLQFQNQKLVQKLETQKVEYSALENKFAQLKERQQPYDSTLKVVNKSWEELITDLE 97
+D A LQ++NQKLVQ+LE QK + ALE KF +L++ Q YD+TL +NK W +LI DL
Sbjct: 1 MDAAALQYENQKLVQQLEAQKSKMRALEGKFKELRDEQCSYDNTLICLNKMWNQLIDDLV 60
Query: 98 SCSMRARESSNGQES--RCLSIIEDVTPHPSHDAFLSRLMETGATESSSADNCPNQMEED 155
+RA NG ++ E + PS + FL RL+ ++ N N
Sbjct: 61 LLGVRAGGDLNGLQALDHEEMSEESLESCPSEEIFLFRLL--------NSRNFRN----- 107
Query: 156 RETGIPRTKNIVSNILAAVDNLWHLKGGLYAAVLKDLQDGGSKQKASSN----------- 204
N S++ V+ L+ ++K LQ+ + Q+A S
Sbjct: 108 ---------NDDSSLSKLVEEALALRYSTTVTLMKSLQEAFAVQQARSESLSLALNGQNS 158
Query: 205 --------------LQSEVKNLRLALMDLHLKHKSLTRELQSRQDIDAKDKAKLNRLKGE 250
L+ V NLR A+ ++ KH+ E+++ ++ +++ ++ L GE
Sbjct: 159 SEDVIVALENHNDYLKEVVDNLRQAVSIINRKHEKYLDEIEAFKNNQSRELHEVKCLSGE 218
Query: 251 LESAVKELEECNCKLAALRAERDVTKGAFFPVLNLGNKHVAGDRVRDEQRDLRDMESVHK 310
LE ++ ELEE KLA L+ + N N V+ D+ D+ RD++ +
Sbjct: 219 LEESMAELEESRRKLAVLQLQTGGGSLMNTSAPNGVNGSVSTDKSSDKGMGWRDLKDAVE 278
Query: 311 ELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLKSVKCLSSSKAFLSVKNQLEKSKSEV 370
E A+++L EL + + + +QL ++Q+ LK + +SK + + +QL +E+
Sbjct: 279 EAKTLAANRLFELHETQEDNLILSKQLEDIQDQLKDENYIVTSKPYTILSDQLHHLNAEI 338
Query: 371 FKYQALFEKLQVEKDNLAWRETELNMKIDLVDVFRRSSAVTDSKIADLGIEIQKQIDEKN 430
+Y+ L E LQ +KI DL EIQK + EKN
Sbjct: 339 ERYRGLVEVLQ-------------------------------AKIEDLEHEIQKLMAEKN 367
Query: 431 RIEMRLEEASREPGRKEIIAEFRALVSSFPEDMSAMQRQLSKYKEAALDIHILRADVLSL 490
+E++ EEA ++ G+K+ E + +S ++M + Q+++ K+AA + LR + L
Sbjct: 368 DLEIKAEEALQDSGKKDFKDEIHVMAASLSKEMELLDNQMNRSKDAASEALALREEADYL 427
Query: 491 TNVLERKVKECETLLASSADQVAEIHKLQAMVQDLTDSNLELKLILDMYRRESTDSRFVN 550
+L +K+ ETL DQ + EL+ I+DM +E ++SR ++
Sbjct: 428 RTLLAKKI---ETL-----DQEKQ----------------ELQFIVDMLGKECSESRAIS 463
Query: 551 LLE 553
+E
Sbjct: 464 EIE 466
>gi|148717625|gb|ABR04260.1| unknown [Arabidopsis thaliana]
gi|148717637|gb|ABR04266.1| unknown [Arabidopsis thaliana]
gi|148717639|gb|ABR04267.1| unknown [Arabidopsis thaliana]
gi|148717641|gb|ABR04268.1| unknown [Arabidopsis thaliana]
gi|148717649|gb|ABR04272.1| unknown [Arabidopsis thaliana]
gi|148717657|gb|ABR04276.1| unknown [Arabidopsis thaliana]
gi|148717667|gb|ABR04281.1| unknown [Arabidopsis thaliana]
Length = 95
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 76/95 (80%)
Query: 296 RDEQRDLRDMESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLKSVKCLSSSKA 355
RD+QRDL+DME+V KEL AS +L ELK LH+ R K+L ++ NLQN KSV+C+SSS+A
Sbjct: 1 RDKQRDLQDMETVLKELTVLASGRLQELKNLHEERTKMLGKMSNLQNKSKSVRCISSSQA 60
Query: 356 FLSVKNQLEKSKSEVFKYQALFEKLQVEKDNLAWR 390
LS+K+QLEKSK VF+Y AL EKLQVEKD++ W+
Sbjct: 61 CLSLKDQLEKSKEAVFQYMALLEKLQVEKDSIVWK 95
>gi|148717623|gb|ABR04259.1| unknown [Arabidopsis thaliana]
gi|148717627|gb|ABR04261.1| unknown [Arabidopsis thaliana]
gi|148717629|gb|ABR04262.1| unknown [Arabidopsis thaliana]
gi|148717631|gb|ABR04263.1| unknown [Arabidopsis thaliana]
gi|148717633|gb|ABR04264.1| unknown [Arabidopsis thaliana]
gi|148717635|gb|ABR04265.1| unknown [Arabidopsis thaliana]
gi|148717643|gb|ABR04269.1| unknown [Arabidopsis thaliana]
gi|148717645|gb|ABR04270.1| unknown [Arabidopsis thaliana]
gi|148717647|gb|ABR04271.1| unknown [Arabidopsis thaliana]
gi|148717651|gb|ABR04273.1| unknown [Arabidopsis thaliana]
gi|148717653|gb|ABR04274.1| unknown [Arabidopsis thaliana]
gi|148717661|gb|ABR04278.1| unknown [Arabidopsis thaliana]
Length = 95
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 76/95 (80%)
Query: 296 RDEQRDLRDMESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLKSVKCLSSSKA 355
RD+QRDL+DME+V KEL AS +L +LK LH+ R K+L ++ NLQN KSV+C+SSS+A
Sbjct: 1 RDKQRDLQDMETVLKELTVLASGRLQQLKNLHEERTKMLGKMSNLQNKSKSVRCISSSQA 60
Query: 356 FLSVKNQLEKSKSEVFKYQALFEKLQVEKDNLAWR 390
LS+K+QLEKSK VF+Y AL EKLQVEKD++ W+
Sbjct: 61 CLSLKDQLEKSKEAVFQYMALLEKLQVEKDSIVWK 95
>gi|148717655|gb|ABR04275.1| unknown [Arabidopsis thaliana]
gi|148717659|gb|ABR04277.1| unknown [Arabidopsis thaliana]
gi|148717663|gb|ABR04279.1| unknown [Arabidopsis thaliana]
gi|148717665|gb|ABR04280.1| unknown [Arabidopsis thaliana]
Length = 95
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 76/95 (80%)
Query: 296 RDEQRDLRDMESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLKSVKCLSSSKA 355
RD+QRDL+DME+V KEL AS +L +LK LH+ R K+L ++ NLQN KSV+C+SSS+A
Sbjct: 1 RDKQRDLQDMETVLKELTVLASGRLQKLKNLHEERTKMLGKMSNLQNKSKSVRCISSSQA 60
Query: 356 FLSVKNQLEKSKSEVFKYQALFEKLQVEKDNLAWR 390
LS+K+QLEKSK VF+Y AL EKLQVEKD++ W+
Sbjct: 61 CLSLKDQLEKSKEAVFQYMALLEKLQVEKDSIVWK 95
>gi|321469893|gb|EFX80871.1| hypothetical protein DAPPUDRAFT_188104 [Daphnia pulex]
Length = 958
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 185/408 (45%), Gaps = 78/408 (19%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
GS+G P K+ F I A S EE +D VLQFQN+KL Q+LE ++
Sbjct: 13 GSSG-PQCKKVQFEPIRLGA--------ISSLEE--MDMKVLQFQNKKLSQRLELRQRTE 61
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMR-ARESSNGQESRCLSIIED 120
+ L + QL++RQ D+ L V+N+ W +L D+ R E+++ ES+ S
Sbjct: 62 AELRQRIEQLEKRQMQDDAVLNVINRYWNQLNEDVRILLQRFDAETADENESKNES---- 117
Query: 121 VTPHPSHDAFLSRLMETGATESSSADNCPNQMEEDRETGIPRTKNIVSNILAAVDNLWHL 180
+ +FL+ L S+ D ++++E + ++ V+ ++ A D L
Sbjct: 118 ----EATTSFLALL--------STWD--KDELDEKLANRVLVSQRAVAKLIRAFDRLLQR 163
Query: 181 KGGLYAAVLKDLQDGG-------SKQKASSNLQSEVKNLRLALMDLHLKHKSLTRELQSR 233
+ A LK D G + ++ ++ +Q+E NL + LH K+ +++ +L+
Sbjct: 164 NEKVTQA-LKGESDNGEVVNLEEAIKQVNAEIQAENSNLHVLNTSLHEKNHAISLKLKEM 222
Query: 234 QD-IDAKDKAKLNRLKGELESAVKELEECNCKLAALRAERDVTKGAFFPVLN----LGNK 288
Q+ + AK+ EL++ V +L + +L R D + L L +
Sbjct: 223 QEQLTAKETE-----AAELQNRVDDL---DYELQKRRHRADSLENHLGEALEKIKVLQQQ 274
Query: 289 HVAGDRVRDEQR--------DLRDMESVHKELMDQ---ASHQLLELKGLHDGRIKVLQQL 337
H AG +V E+ + ME HKEL +Q A+++L EL LH VLQQL
Sbjct: 275 HQAGVQVEAEKTSGSKVVSVSQKKMEDQHKELEEQREMAANRLAELDRLHQNHRDVLQQL 334
Query: 338 YNLQNTLKSV-----------KCLSSSKAFL-----SVKNQLEKSKSE 369
+L+ ++ + KCL S + L +K QL++++ +
Sbjct: 335 EHLKMDIRQLPESVVVETTEYKCLQSQFSVLYNDSMGLKTQLDEARQQ 382
>gi|322796552|gb|EFZ19026.1| hypothetical protein SINV_06436 [Solenopsis invicta]
Length = 482
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 123/274 (44%), Gaps = 46/274 (16%)
Query: 15 SSISPTAATAKKNPFF--PSSEEKKIDTAVLQFQNQKLVQKLETQKVEYSALENKFAQLK 72
SS P + P P S +++D VLQFQN+KL Q+LE + + L + QL+
Sbjct: 11 SSSQPPIKKVQFEPILIGPISTLEEMDMKVLQFQNKKLAQRLEQRHRMEAELRQRIEQLE 70
Query: 73 ERQQPYDSTLKVVNKSWEELITDLESCSMR-----ARESSNGQESRCLSIIEDVTPHPSH 127
+RQ D+ L VVN+ W +L D+ R A ES N ES +
Sbjct: 71 KRQMQDDAVLNVVNRYWNQLNEDIRVLLQRFDAETADESENKNESEATT----------- 119
Query: 128 DAFLSRLMETGATESSSADNCPNQMEEDRETGIPRTKNIVSNILAAVDNLWHLKGGLYAA 187
+FL +L SS D ++++ + +K VS ++ A D L + A
Sbjct: 120 -SFLMQL--------SSWDK--EELDDKLANRVQVSKRAVSKVVQAFDRLSQRNEKITLA 168
Query: 188 VLKDLQDGGSK-------QKASSNLQSEVKNLRLALMDLHLKHKSLTRELQSRQD-IDAK 239
LK DG ++A++ +Q E +NL+ + LH K+ +++ ++ QD I K
Sbjct: 169 -LKGEFDGEEAPNIDEVVRRANAEIQMENRNLQAINIQLHEKYHTISLKMSELQDTITGK 227
Query: 240 DKAKLNRLKGELESAVKELEECNCKLAALRAERD 273
D L EL + V +L+ +L +RA D
Sbjct: 228 DT-----LAAELRNQVDDLQ---YELNKVRARND 253
>gi|332019306|gb|EGI59813.1| E3 ubiquitin-protein ligase Bre1 [Acromyrmex echinatior]
Length = 307
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 123/274 (44%), Gaps = 46/274 (16%)
Query: 15 SSISPTAATAKKNPFF--PSSEEKKIDTAVLQFQNQKLVQKLETQKVEYSALENKFAQLK 72
SS P + P P S +++D VLQFQN+KL Q+LE + + L + QL+
Sbjct: 11 SSSQPPIKKVQFEPILIGPISTLEEMDMKVLQFQNKKLAQRLEQRHRMEAELRQRIEQLE 70
Query: 73 ERQQPYDSTLKVVNKSWEELITDLESCSMR-----ARESSNGQESRCLSIIEDVTPHPSH 127
+RQ D+ L VVN+ W +L D+ R A ES N ES +
Sbjct: 71 KRQMQDDAVLNVVNRYWNQLNEDIRVLLQRFDAETADESENKNESEATT----------- 119
Query: 128 DAFLSRLMETGATESSSADNCPNQMEEDRETGIPRTKNIVSNILAAVDNLWHLKGGLYAA 187
+FL +L SS D ++++ + +K VS ++ A D L + A
Sbjct: 120 -SFLMQL--------SSWDK--EELDDKLANRVQVSKRAVSKVVQAFDRLSQRNEKITLA 168
Query: 188 VLKDLQDGGSK-------QKASSNLQSEVKNLRLALMDLHLKHKSLTRELQSRQD-IDAK 239
LK DG ++A++ +Q E +NL+ + LH K+ +++ ++ QD I K
Sbjct: 169 -LKGEFDGEEAPNIDEVVRRANAEIQMENRNLQAINIQLHEKYHTISLKMSELQDTITGK 227
Query: 240 DKAKLNRLKGELESAVKELEECNCKLAALRAERD 273
D L EL + V +L+ +L +RA D
Sbjct: 228 DT-----LAAELRNQVDDLQ---YELNKVRARND 253
>gi|307199111|gb|EFN79821.1| E3 ubiquitin-protein ligase Bre1 [Harpegnathos saltator]
Length = 957
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 132/527 (25%), Positives = 227/527 (43%), Gaps = 97/527 (18%)
Query: 15 SSISPTAATAKKNPFF--PSSEEKKIDTAVLQFQNQKLVQKLETQKVEYSALENKFAQLK 72
+S P + P P S +++D VLQFQN+KL Q+LE + + L + QL+
Sbjct: 11 TSSQPPIKKVQFEPILIGPISTLEEMDMKVLQFQNKKLAQRLEQRHRVEAELRQRIEQLE 70
Query: 73 ERQQPYDSTLKVVNKSWEELITDLESCSMR-----ARESSNGQESRCLSIIEDVTPHPSH 127
+RQ D+ L VVN+ W +L D+ R A ES N ES +
Sbjct: 71 KRQMQDDAVLNVVNRYWNQLNEDIRVLLQRFDAETADESENKNESEATT----------- 119
Query: 128 DAFLSRLMETGATESSSADNCPNQMEEDRETGIPRTKNIVSNILAAVDNLWHLKGGLYAA 187
+FL +L SS D ++++ + +K VS ++ A D L + A
Sbjct: 120 -SFLMQL--------SSWD--KEELDDKLANRVQVSKRAVSKVVQAFDRLSQRNEKITLA 168
Query: 188 VLKDLQDGGSK-------QKASSNLQSEVKNLRLALMDLHLKHKSLTRELQSRQD-IDAK 239
LK DG ++A++ +Q E +NL+ + LH K+ +++ ++ QD I K
Sbjct: 169 -LKGQFDGDEAPNIDEVVRRANAEIQMENRNLQAINIQLHEKYHTISLKMSELQDTITGK 227
Query: 240 D-------------KAKLNRLKGELESAVKELEECNCKLAALRAERDV-TKGAFFPVLNL 285
D + +LN+++ + L E KL A + KG+ P L
Sbjct: 228 DTLAAELRNQVDDLQYELNKVRARNDKLEHHLGEAIEKLKAFQQIHGTDEKGSNKPS-TL 286
Query: 286 GNKHVAGDRVRDEQRDLRDMESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLK 345
V+ ++ D QR+L +E + A+++L EL LH L+++ L+ ++
Sbjct: 287 VASSVSQTKLEDLQREL-------EETRELANNRLQELDKLHQQHRDTLKEVEKLKMDIR 339
Query: 346 SV-----------KCLSSSKAFL-----SVKNQLEKSKSEVFKYQALFEKLQVEKDNLAW 389
+ KCL S + L +K QL+ ++ ++LQ K N+
Sbjct: 340 QLPESVIVETTEYKCLQSQFSVLYNESMQLKTQLDDAR----------QQLQSSK-NIHL 388
Query: 390 RETELNMKIDLVDVFR-RSSAVTDSKIADLGIEIQKQIDEKNRIEMRLEEASREPGRKEI 448
R E+ +L+ + R + ++ D+ +++K+ E RIE A+ E I
Sbjct: 389 RHIEMMESEELLAQKKLRGECI---QLEDVLAQLRKEY-EMLRIEFEQNLAANEQT-GPI 443
Query: 449 IAEFRALVSSFPEDMSAMQ----RQLSKYKEAALDIHILRADVLSLT 491
E R L++S ++ R KYKEA+ +I L+ +V LT
Sbjct: 444 NREMRHLITSLQNHNQQLKGEVIRYKRKYKEASTEIPRLKKEVEELT 490
>gi|260834199|ref|XP_002612099.1| hypothetical protein BRAFLDRAFT_104815 [Branchiostoma floridae]
gi|229297472|gb|EEN68108.1| hypothetical protein BRAFLDRAFT_104815 [Branchiostoma floridae]
Length = 655
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 169/382 (44%), Gaps = 76/382 (19%)
Query: 16 SISPTAATAKKNPFFPS-----------SEEKKIDTAVLQFQNQKLVQKLETQKVEYSAL 64
S S A AKK+ PS S ++++D VLQFQN+KL ++LE +K L
Sbjct: 12 STSAGAPPAKKSITIPSIVFEPVRLDKMSSQEELDLKVLQFQNRKLAERLEQRKAIEDEL 71
Query: 65 ENKFAQLKERQQPYDSTLKVVNKSW----EELITDLESCSMRA------RESSNGQESRC 114
+ +L++RQ + L +VN+ W ++L + E+ A E SR
Sbjct: 72 RERIERLEKRQLADEGALGLVNRYWTLEGDQLTNEAEAKPQLAAGPIDMEEQPTSSSSRD 131
Query: 115 LSIIEDVTPHPSHDA---FLSRLMETGATESSSADNCPNQMEEDRETGIPRTKNIVSNIL 171
LS +P PS + FLS+L TG E ++E+ + + + + V+ ++
Sbjct: 132 LST---PSPAPSSEGTGIFLSQLTGTGDDE---------ELEQHLKEKVQFSLDAVAKVV 179
Query: 172 AAVDNLWHLKGGLYAAVLKDLQDGGSKQKASSNLQSEVKNLRLALMDLHLKHKSLTRELQ 231
A D + K L A+ GG + + +L+ E+K LM + + +SL LQ
Sbjct: 180 KAFDRVQGEKNKLAQAI-----HGG---EGAPSLEDELKEENKRLMAENQEVQSLVATLQ 231
Query: 232 SRQD------IDAKDKAKLNRLK-GELESAVKEL--------EECNCKLAALRAE--RDV 274
++ D +DK + +K EL++ +++L ++C KL AE +
Sbjct: 232 AKHHATTLKFTDLQDKLGASEIKIPELKNTIEDLQYDKDKLRQKCE-KLGFHLAELVEKM 290
Query: 275 TKGAFFPVLNLGNKHVAGDRVR------DEQRDLRD--------MESVHKELMDQASHQL 320
GAF V + G K + ++ DEQR+L + ++ H+ LM +
Sbjct: 291 KSGAFHSVTSSGAKELPKGQLEMLKADLDEQRELANNRLAELEKLQHEHQVLMKETEKLK 350
Query: 321 LELKGLHDGRIKVLQQLYNLQN 342
++LK L D I + +LQ+
Sbjct: 351 MDLKNLPDSVINETSEYKSLQS 372
>gi|307180966|gb|EFN68754.1| E3 ubiquitin-protein ligase Bre1 [Camponotus floridanus]
Length = 964
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 108/240 (45%), Gaps = 38/240 (15%)
Query: 16 SISPTAATAKKNPFF--PSSEEKKIDTAVLQFQNQKLVQKLETQKVEYSALENKFAQLKE 73
S P + P P S +++D VLQFQN+KL Q+LE + + L + QL++
Sbjct: 12 SSQPAIKKVQFEPILIGPISTLEEMDMKVLQFQNKKLAQRLEQRHRMEAELRQRIEQLEK 71
Query: 74 RQQPYDSTLKVVNKSWEELITDLESCSMR-----ARESSNGQESRCLSIIEDVTPHPSHD 128
RQ D+ L VVN+ W +L D+ R A ES N ES +
Sbjct: 72 RQMQDDAVLNVVNRYWNQLNEDIRVLLQRFDAETADESENKNESEATT------------ 119
Query: 129 AFLSRLMETGATESSSADNCPNQMEEDRETGIPRTKNIVSNILAAVDNLWHLKGGLYAAV 188
+FL +L SS D +++E + +K VS ++ A D L + A
Sbjct: 120 SFLMQL--------SSWD--KEELDEKLANRVQVSKRAVSKVVQAFDRLSQRNEKITLA- 168
Query: 189 LKDLQDGGSK-------QKASSNLQSEVKNLRLALMDLHLKHKSLTRELQSRQD-IDAKD 240
LK DG ++A++ +Q E +NL++ + LH KH + + ++ QD I KD
Sbjct: 169 LKGEFDGEEAPNIDEVVRRANAEIQMENRNLQVLNLQLHEKHHTSSLKMSRLQDTIMGKD 228
>gi|340711825|ref|XP_003394469.1| PREDICTED: e3 ubiquitin-protein ligase Bre1-like [Bombus
terrestris]
Length = 957
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 122/274 (44%), Gaps = 46/274 (16%)
Query: 15 SSISPTAATAKKNPFF--PSSEEKKIDTAVLQFQNQKLVQKLETQKVEYSALENKFAQLK 72
S P + P P S +++D VLQFQN+KL Q+LE + + L + QL+
Sbjct: 11 SGSQPPIKKVQFEPILIGPISTLEEMDMKVLQFQNKKLAQRLEQRHRVEAELRQRIEQLE 70
Query: 73 ERQQPYDSTLKVVNKSWEELITDLESCSMR-----ARESSNGQESRCLSIIEDVTPHPSH 127
+RQ D+ L VVN+ W +L D+ R A ES N ES +
Sbjct: 71 KRQMQDDAVLNVVNRYWNQLNEDIRVLLQRFDAETADESENKNESEATT----------- 119
Query: 128 DAFLSRLMETGATESSSADNCPNQMEEDRETGIPRTKNIVSNILAAVDNLWHLKGGLYAA 187
+FL +L SS D ++++ + +K VS ++ A D L + A
Sbjct: 120 -SFLMQL--------SSWDK--EELDDKLANRVQVSKRAVSKVVQAFDRLSQRNEKITLA 168
Query: 188 VLKDLQDGGSK-------QKASSNLQSEVKNLRLALMDLHLKHKSLTRELQSRQD-IDAK 239
LK DG ++A+S +Q E +NL+ + LH K+ +++ ++ QD I K
Sbjct: 169 -LKGEFDGDEAPNIDEVVRRANSEIQMENRNLQAINIQLHEKYHTISLKMSELQDTITGK 227
Query: 240 DKAKLNRLKGELESAVKELEECNCKLAALRAERD 273
D L EL + V +L+ +L +RA D
Sbjct: 228 DT-----LAAELRNQVDDLQ---YELNKVRARND 253
>gi|193678945|ref|XP_001949533.1| PREDICTED: e3 ubiquitin-protein ligase Bre1-like [Acyrthosiphon
pisum]
Length = 953
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 177/396 (44%), Gaps = 66/396 (16%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G + EP K+ F + P S + +D VLQ+QN+KL Q+LE +
Sbjct: 9 GGSEEPPMKKVQFEPVR----------LGPISTMEDLDMKVLQYQNKKLAQRLEQRNRLE 58
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMR-ARESSNGQESRCLSIIED 120
+ L N+ QL++RQ DS L VVN+ W +L D+ R E+++ ES+ S
Sbjct: 59 AELRNRIEQLEKRQTQDDSVLNVVNRYWNQLNEDIRVLLQRFDAETADELESKNES---- 114
Query: 121 VTPHPSHDAFLSRLMETGATESSSADNCPNQMEEDRETGIPRTKNIVSNILAAVDNLWH- 179
+ +FL +L S+ D +++E + +K V+ ++ A D L
Sbjct: 115 ----EATTSFLVQL--------STWD--KEELDEKLANRVQVSKRAVAKVIQAFDRLMQR 160
Query: 180 -------LKGGLYAAVLKDLQDGGSKQKASSNLQSEVKNLRLALMDLHLKHKSLTRELQS 232
LKG L + + + ++A+S LQ+E + L+ LH K+ +++ +L
Sbjct: 161 NEKITLALKGELEGEEAPSMDE--TVRQANSELQAENQKLQTLNTSLHKKYHTMSLKLAG 218
Query: 233 RQD-IDAKDK--AKLNRLKGELESAVKELEECNCKLAALRAE-RDVTKGAFFPVLNLGNK 288
QD ++ K+ A++ EL+ +++ + N KL A+ RD KG + + ++
Sbjct: 219 LQDNVNCKETEVAEMRNQIEELQYEYQKILDRNYKLETHLADSRDKLKG--LEAMQIDDR 276
Query: 289 HVAGDRVRDEQR--DLRDMESVHK---ELMDQASHQLLELKGLHDGRIKVLQQLYNLQNT 343
++ Q L+ ME K EL + +++L EL LH + L ++ L+
Sbjct: 277 VISKPDTSIAQSSVSLQKMEEFQKENEELRELNNNRLQELDKLHQQHRETLMEVERLRMD 336
Query: 344 LKSV-----------KCLSSS-----KAFLSVKNQL 363
L+ + KC+ S F+ ++NQL
Sbjct: 337 LRQLPENVIIDTTEYKCIQSHFSVLYSEFMLMRNQL 372
>gi|350402387|ref|XP_003486466.1| PREDICTED: E3 ubiquitin-protein ligase Bre1-like [Bombus impatiens]
Length = 957
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 122/274 (44%), Gaps = 46/274 (16%)
Query: 15 SSISPTAATAKKNPFF--PSSEEKKIDTAVLQFQNQKLVQKLETQKVEYSALENKFAQLK 72
S P + P P S +++D VLQFQN+KL Q+LE + + L + QL+
Sbjct: 11 SGSQPPIKKVQFEPILIGPISTLEEMDMKVLQFQNKKLAQRLEQRHRVEAELRQRIEQLE 70
Query: 73 ERQQPYDSTLKVVNKSWEELITDLESCSMR-----ARESSNGQESRCLSIIEDVTPHPSH 127
+RQ D+ L VVN+ W +L D+ R A ES N ES +
Sbjct: 71 KRQMQDDAVLNVVNRYWNQLNEDIRVLLQRFDAETADESENKNESEATT----------- 119
Query: 128 DAFLSRLMETGATESSSADNCPNQMEEDRETGIPRTKNIVSNILAAVDNLWHLKGGLYAA 187
+FL +L SS D ++++ + +K VS ++ A D L + A
Sbjct: 120 -SFLMQL--------SSWDK--EELDDKLANRVQVSKRAVSKVVQAFDRLSQRNEKITLA 168
Query: 188 VLKDLQDGGSK-------QKASSNLQSEVKNLRLALMDLHLKHKSLTRELQSRQD-IDAK 239
LK DG ++A+S +Q E +NL+ + LH K+ +++ ++ QD I K
Sbjct: 169 -LKGEFDGEEAPNIDEVVRRANSEIQMENRNLQAINIQLHEKYHTISLKMSELQDTITGK 227
Query: 240 DKAKLNRLKGELESAVKELEECNCKLAALRAERD 273
D L EL + V +L+ +L +RA D
Sbjct: 228 DT-----LAAELRNQVDDLQ---YELNKVRARND 253
>gi|74196106|dbj|BAE32971.1| unnamed protein product [Mus musculus]
Length = 1001
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 7/129 (5%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D+ VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKMNREEKTTTTLIEPIRLGGISSTEE--MDSKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLES---CSMRARESSNGQE-SRCL-S 116
L + +L++RQ D+TL +VN+ W +L +E+ C RE S+G E C
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEALLQCYENQRELSSGTEVPGCQEG 130
Query: 117 IIEDVTPHP 125
+ DV P P
Sbjct: 131 LTRDVIPRP 139
>gi|229093990|ref|NP_758485.2| E3 ubiquitin-protein ligase BRE1B [Mus musculus]
gi|84027769|sp|Q3U319.2|BRE1B_MOUSE RecName: Full=E3 ubiquitin-protein ligase BRE1B; Short=BRE1-B;
AltName: Full=RING finger protein 40
gi|26354679|dbj|BAC40966.1| unnamed protein product [Mus musculus]
gi|74142858|dbj|BAE42468.1| unnamed protein product [Mus musculus]
gi|148685614|gb|EDL17561.1| ring finger protein 40, isoform CRA_a [Mus musculus]
Length = 1001
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 7/129 (5%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D+ VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKMNREEKTTTTLIEPIRLGGISSTEE--MDSKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLES---CSMRARESSNGQE-SRCL-S 116
L + +L++RQ D+TL +VN+ W +L +E+ C RE S+G E C
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEALLQCYENQRELSSGTEVPGCQEG 130
Query: 117 IIEDVTPHP 125
+ DV P P
Sbjct: 131 LTRDVIPRP 139
>gi|148685617|gb|EDL17564.1| ring finger protein 40, isoform CRA_d [Mus musculus]
Length = 933
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 7/129 (5%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D+ VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKMNREEKTTTTLIEPIRLGGISSTEE--MDSKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLES---CSMRARESSNGQE-SRCL-S 116
L + +L++RQ D+TL +VN+ W +L +E+ C RE S+G E C
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEALLQCYENQRELSSGTEVPGCQEG 130
Query: 117 IIEDVTPHP 125
+ DV P P
Sbjct: 131 LTRDVIPRP 139
>gi|23468326|gb|AAH38348.1| Ring finger protein 40 [Mus musculus]
Length = 1001
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 7/129 (5%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D+ VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKMNREEKTTTTLIEPIRLGGISSTEE--MDSKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLES---CSMRARESSNGQE-SRCL-S 116
L + +L++RQ D+TL +VN+ W +L +E+ C RE S+G E C
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEALLQCYENQRELSSGTEVPGCQEG 130
Query: 117 IIEDVTPHP 125
+ DV P P
Sbjct: 131 LTRDVIPRP 139
>gi|37360032|dbj|BAC97994.1| mKIAA0661 protein [Mus musculus]
Length = 1035
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 7/129 (5%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D+ VLQF+N+KL ++LE ++
Sbjct: 47 GGSGPPEKKMNREEKTTTTLIEPIRLGGISSTEE--MDSKVLQFKNKKLAERLEQRQACE 104
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLES---CSMRARESSNGQE-SRCL-S 116
L + +L++RQ D+TL +VN+ W +L +E+ C RE S+G E C
Sbjct: 105 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEALLQCYENQRELSSGTEVPGCQEG 164
Query: 117 IIEDVTPHP 125
+ DV P P
Sbjct: 165 LTRDVIPRP 173
>gi|383857052|ref|XP_003704020.1| PREDICTED: E3 ubiquitin-protein ligase Bre1-like [Megachile
rotundata]
Length = 957
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 122/274 (44%), Gaps = 46/274 (16%)
Query: 15 SSISPTAATAKKNPFF--PSSEEKKIDTAVLQFQNQKLVQKLETQKVEYSALENKFAQLK 72
S P + P P S +++D VLQFQN+KL Q+LE + + L + QL+
Sbjct: 11 SGSQPPIKKVQFEPILIGPISTLEEMDMKVLQFQNKKLAQRLEQRHRVEAELRQRIEQLE 70
Query: 73 ERQQPYDSTLKVVNKSWEELITDLESCSMR-----ARESSNGQESRCLSIIEDVTPHPSH 127
+RQ D+ L VVN+ W +L D+ R A ES N ES +
Sbjct: 71 KRQMQDDAVLNVVNRYWNQLNEDIRVLLQRFDAETADESENKNESEATT----------- 119
Query: 128 DAFLSRLMETGATESSSADNCPNQMEEDRETGIPRTKNIVSNILAAVDNLWHLKGGLYAA 187
+FL +L SS D ++++ + +K VS ++ A D L + A
Sbjct: 120 -SFLMQL--------SSWDK--EELDDKLANRVQVSKRAVSKVVQAFDRLSQRNEKITLA 168
Query: 188 VLKDLQDGGSK-------QKASSNLQSEVKNLRLALMDLHLKHKSLTRELQSRQD-IDAK 239
LK DG ++A++ +Q E +NL+ + LH K+ +++ ++ QD I K
Sbjct: 169 -LKGEFDGEEAPNIDEVVRRANAEIQMENRNLQAINIQLHEKYHTISLKMSELQDTITGK 227
Query: 240 DKAKLNRLKGELESAVKELEECNCKLAALRAERD 273
D L EL + V +L+ +L +RA D
Sbjct: 228 DT-----LAAELRNQVDDLQ---YELNKVRARND 253
>gi|148685616|gb|EDL17563.1| ring finger protein 40, isoform CRA_c [Mus musculus]
Length = 1012
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 7/129 (5%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D+ VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKMNREEKTTTTLIEPIRLGGISSTEE--MDSKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLES---CSMRARESSNGQE-SRCL-S 116
L + +L++RQ D+TL +VN+ W +L +E+ C RE S+G E C
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEALLQCYENQRELSSGTEVPGCQEG 130
Query: 117 IIEDVTPHP 125
+ DV P P
Sbjct: 131 LTRDVIPRP 139
>gi|345483701|ref|XP_001601663.2| PREDICTED: E3 ubiquitin-protein ligase Bre1-like [Nasonia
vitripennis]
Length = 955
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 122/274 (44%), Gaps = 46/274 (16%)
Query: 15 SSISPTAATAKKNPFF--PSSEEKKIDTAVLQFQNQKLVQKLETQKVEYSALENKFAQLK 72
S+ P + P P S +++D VLQFQN+KL Q+LE + L + QL+
Sbjct: 12 SASQPPIKKVQFEPTLIGPISTLEEMDMKVLQFQNKKLAQRLEQRHRVEIELRQRIEQLE 71
Query: 73 ERQQPYDSTLKVVNKSWEELITDLESCSMR-----ARESSNGQESRCLSIIEDVTPHPSH 127
+RQ D+ L VVN+ W +L D+ R A ES N ES +
Sbjct: 72 KRQTQDDAVLNVVNRYWNQLNEDIRVLLQRFDAETADESENKNESEATT----------- 120
Query: 128 DAFLSRLMETGATESSSADNCPNQMEEDRETGIPRTKNIVSNILAAVDNLWHLKGGLYAA 187
+FL +L SS D ++++ + +K VS ++ A D L + A
Sbjct: 121 -SFLMQL--------SSWD--KEELDDKLANRVQVSKRAVSKVVQAFDRLSQRNEKITLA 169
Query: 188 VLKDLQDGGSK-------QKASSNLQSEVKNLRLALMDLHLKHKSLTRELQSRQD-IDAK 239
LK DG +KA+ +LQ E +NL+ + LH K+ +++ ++ QD I K
Sbjct: 170 -LKGEFDGEEAPNIDEVVRKANCDLQMENRNLQAINIQLHEKYHTISLKMSELQDTITGK 228
Query: 240 DKAKLNRLKGELESAVKELEECNCKLAALRAERD 273
D L EL + V +L+ +L +RA D
Sbjct: 229 DT-----LAAELRNQVDDLQ---YELNKVRARND 254
>gi|354499383|ref|XP_003511788.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B-like isoform 1
[Cricetulus griseus]
gi|344247531|gb|EGW03635.1| E3 ubiquitin-protein ligase BRE1B [Cricetulus griseus]
Length = 1001
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 63/114 (55%), Gaps = 5/114 (4%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D+ VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLNREEKTTTTLIEPIRLGGISSTEE--MDSKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLES---CSMRARESSNGQES 112
L + +L++RQ D+TL +VN+ W +L +E+ C R RE S+G E+
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEALLRCHERQRELSSGTEA 124
>gi|354499385|ref|XP_003511789.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B-like isoform 2
[Cricetulus griseus]
Length = 901
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 63/114 (55%), Gaps = 5/114 (4%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D+ VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLNREEKTTTTLIEPIRLGGISSTEE--MDSKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLES---CSMRARESSNGQES 112
L + +L++RQ D+TL +VN+ W +L +E+ C R RE S+G E+
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEALLRCHERQRELSSGTEA 124
>gi|189240891|ref|XP_971710.2| PREDICTED: similar to CG10542 CG10542-PA [Tribolium castaneum]
gi|270013497|gb|EFA09945.1| hypothetical protein TcasGA2_TC012098 [Tribolium castaneum]
Length = 976
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 130/527 (24%), Positives = 218/527 (41%), Gaps = 88/527 (16%)
Query: 3 STGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEYS 62
S G P K+ HF + P S +++D VLQFQN+KL Q++E +
Sbjct: 11 SGGPPPIKKIHFEP----------HLIGPVSTLEEMDIKVLQFQNKKLAQRIEQRYRTEQ 60
Query: 63 ALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMR-----ARESSNGQESRCLSI 117
L + QL++RQ D+ L VVN+ W +L D+ R A ES N ES +
Sbjct: 61 ELRQRIEQLEKRQTQDDAMLNVVNRYWNQLNEDIRILLQRFDAETADESENKNESEATT- 119
Query: 118 IEDVTPHPSHDAFLSRLMETGATESSSADNCPNQMEEDRETGIPRTKNIVSNILAAVDNL 177
+FL +L E + D N+++ R V+ ++ A D L
Sbjct: 120 -----------SFLMQLSTWDKEELN--DKLANRVQVSRRA--------VAKVIQAFDRL 158
Query: 178 WHLKGGLYAAVLKDL--QDGGSKQ----KASSNLQSEVKNLRLALMDLHLKHKSLTRELQ 231
+ A+ +L QD S + + LQ+E +NL+ LH K+ S + ++
Sbjct: 159 MQRNEKITLALKGELEGQDAPSVDEVICQTNVQLQAENRNLQALNTSLHEKYHSNSLKVA 218
Query: 232 SRQDIDAKDKAKLNRLKGELESAVKELEEC---NCKLAALRAERDVTKGAFF-----PVL 283
QD + ++ LK +++ ELE+ N KL AE + P
Sbjct: 219 ELQDSVTAKETEIAELKNQIDDLQYELEKVRNRNDKLETHLAEAIEKLKTYHQLHGDPEK 278
Query: 284 NLGNKHVAGDRVRDEQRDLRDMESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQNT 343
K + V Q L D+ +EL + A+ +L EL LH + L+++ L+
Sbjct: 279 GPQQKQIVQSNV--SQAKLEDLTKEVEELTELANTRLAELDKLHQTHRETLKEVEKLKMD 336
Query: 344 LKSV-----------KCLSSSKAFL-----SVKNQLEKSKSEVFKYQALFEKLQVEKDNL 387
++ + KCL S + L +K QL++++ ++LQ K N
Sbjct: 337 IRQLPESVIVETTEYKCLQSQFSVLYNESMQLKTQLDEAR----------QQLQTSK-NA 385
Query: 388 AWRETELNMKIDLVDVFRRSSAVTDSKIADLGIEIQKQIDEKNRIEMRLEEASREPGRKE 447
R E+ +L+ + V ++ D +++K+ E RIE A+ E
Sbjct: 386 HLRNIEMMESEELIAQKKLRQEVM--QLEDFLAQLRKEY-EMLRIEFEQNLAANEQT-GP 441
Query: 448 IIAEFRALVSSFPEDMSAMQ----RQLSKYKEAALDIHILRADVLSL 490
I E R L++S + ++ R KYKEA +I L+ ++ L
Sbjct: 442 INREMRHLITSLQNNTQQLKGEVHRYKRKYKEANAEIPKLKKEIEDL 488
>gi|348584334|ref|XP_003477927.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B-like isoform 1 [Cavia
porcellus]
Length = 1001
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLNREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLES---CSMRARESSNGQESRCLSII 118
L + +L++RQ D+TL +VN+ W +L +E+ C R R+ S G E+
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVETLLRCHERQRDLSTGPEA------ 124
Query: 119 EDVTPHPSHDAFLSRLMETGATE 141
P+ D LME G +E
Sbjct: 125 PGTQEKPTRDVIP--LMEPGTSE 145
>gi|348584336|ref|XP_003477928.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B-like isoform 2 [Cavia
porcellus]
Length = 901
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLNREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLES---CSMRARESSNGQESRCLSII 118
L + +L++RQ D+TL +VN+ W +L +E+ C R R+ S G E+
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVETLLRCHERQRDLSTGPEA------ 124
Query: 119 EDVTPHPSHDAFLSRLMETGATE 141
P+ D LME G +E
Sbjct: 125 PGTQEKPTRDVIP--LMEPGTSE 145
>gi|380030127|ref|XP_003698707.1| PREDICTED: E3 ubiquitin-protein ligase Bre1-like [Apis florea]
Length = 953
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 107/241 (44%), Gaps = 38/241 (15%)
Query: 15 SSISPTAATAKKNPFF--PSSEEKKIDTAVLQFQNQKLVQKLETQKVEYSALENKFAQLK 72
S P + P P S +++D VLQFQN+KL Q+LE + + L + QL+
Sbjct: 11 SGSQPPIKKVQFEPILIGPISTLEEMDMKVLQFQNKKLAQRLEQRHRVEAELRERIQQLE 70
Query: 73 ERQQPYDSTLKVVNKSWEELITDLESCSMR-----ARESSNGQESRCLSIIEDVTPHPSH 127
RQ D+ L VVN+ W +L D+ R A ES N ES +
Sbjct: 71 IRQMQDDAVLNVVNRYWNQLNEDIRILLQRFDAETADESENKNESEATT----------- 119
Query: 128 DAFLSRLMETGATESSSADNCPNQMEEDRETGIPRTKNIVSNILAAVDNLWHLKGGLYAA 187
+FL +L SS D ++ + + +K VS ++ A D L + A
Sbjct: 120 -SFLMQL--------SSWDK--EELNDKLANRVQVSKRAVSKVVQAFDRLSQRNEKITLA 168
Query: 188 VLKDLQDGGSK-------QKASSNLQSEVKNLRLALMDLHLKHKSLTRELQSRQD-IDAK 239
LK DG ++A++ +Q E +NL+ + LH K+ +++ ++ QD I AK
Sbjct: 169 -LKGEFDGEEAPNIDEVVRRANAEIQMENRNLQAINIQLHEKYHTISLKMSELQDTITAK 227
Query: 240 D 240
D
Sbjct: 228 D 228
>gi|328778821|ref|XP_625025.3| PREDICTED: e3 ubiquitin-protein ligase Bre1, partial [Apis
mellifera]
Length = 930
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 103/223 (46%), Gaps = 36/223 (16%)
Query: 31 PSSEEKKIDTAVLQFQNQKLVQKLETQKVEYSALENKFAQLKERQQPYDSTLKVVNKSWE 90
P S +++D VLQFQN+KL Q+LE + + L + QL+ RQ D+ L VVN+ W
Sbjct: 2 PISTLEEMDMKVLQFQNKKLAQRLEQRHRVEAELRERIQQLEIRQMQDDAVLNVVNRYWN 61
Query: 91 ELITDLESCSMR-----ARESSNGQESRCLSIIEDVTPHPSHDAFLSRLMETGATESSSA 145
+L D+ R A ES N ES + +FL +L SS
Sbjct: 62 QLNEDIRILLQRFDAETADESENKNESEATT------------SFLMQL--------SSW 101
Query: 146 DNCPNQMEEDRETGIPRTKNIVSNILAAVDNLWHLKGGLYAAVLKDLQDGGSK------- 198
D ++ + + +K VS ++ A D L + A LK DG
Sbjct: 102 D--KEELNDKLANRVQVSKRAVSKVVQAFDRLSQRNEKITLA-LKGEFDGEEAPNIDEVV 158
Query: 199 QKASSNLQSEVKNLRLALMDLHLKHKSLTRELQSRQD-IDAKD 240
++A++ +Q E +NL+ + LH K+ +++ ++ QD I AKD
Sbjct: 159 RRANAEIQMENRNLQAINIQLHEKYHTISLKMSELQDTITAKD 201
>gi|242006288|ref|XP_002423984.1| ubiquitin-protein ligase BRE1A, putative [Pediculus humanus
corporis]
gi|212507266|gb|EEB11246.1| ubiquitin-protein ligase BRE1A, putative [Pediculus humanus
corporis]
Length = 989
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 112/258 (43%), Gaps = 58/258 (22%)
Query: 4 TGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEYSA 63
+G+P K+ F I P S +++D V+QFQN+KL Q+LE + +
Sbjct: 15 SGQPPIKKVQFEPIQ----------IGPISMLEELDIKVIQFQNKKLAQRLEQRHRIEAE 64
Query: 64 LENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMR-----ARESSNGQESRCLSII 118
L + QL++RQ D+ L VVN+ W +L D+ R A ES N E+ +
Sbjct: 65 LRQRIEQLEKRQTQDDAVLNVVNRYWNQLNEDIRVLLQRFDAETADESENKNENEATT-- 122
Query: 119 EDVTPHPSHDAFLSRLMETGATESSSADNCPNQMEEDRETGIPRTKNIVSNILAAVDNLW 178
+FL +L S+ D ++++ + +K V+ ++ A D L
Sbjct: 123 ----------SFLMQL--------STWDK--EELDDKLANRVQVSKRAVAKVIQAFDRLM 162
Query: 179 HLKGGLYAAVLKDLQDGG--------------------SKQKASSNLQSEVKNLRLALMD 218
+ A+ +L DGG + ++A+ +LQ+E +NL
Sbjct: 163 QRNEKITLALKGEL-DGGHLWNLLQSCPVEYEKPNMDETIRQANIDLQAENRNLHTLNTS 221
Query: 219 LHLKHKSLTRELQSRQDI 236
LH K+ +++ ++ QD+
Sbjct: 222 LHEKYHTMSLKMSELQDL 239
>gi|158285848|ref|XP_308493.4| AGAP007335-PA [Anopheles gambiae str. PEST]
gi|157020186|gb|EAA45420.4| AGAP007335-PA [Anopheles gambiae str. PEST]
Length = 1064
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 113/250 (45%), Gaps = 38/250 (15%)
Query: 31 PSSEEKKIDTAVLQFQNQKLVQKLETQKVEYSALENKFAQLKERQQPYDSTLKVVNKSWE 90
P S +++D VL+FQN+KL Q++E + S L + QL++RQ D+ L VVN+ W
Sbjct: 53 PISTLEELDIKVLKFQNKKLAQRIEQRIRCESELRTRIEQLEKRQTQDDAVLNVVNRYWN 112
Query: 91 ELITDLESCSMR-----ARESSNGQESRCLSIIEDVTPHPSHDAFLSRLMETGATESSSA 145
+L D+ R A ES N E+ +VT +FL +L S+
Sbjct: 113 QLNEDIRVLLQRFDAETADESENKNEN-------EVTT-----SFLMQL--------STW 152
Query: 146 DNCPNQMEEDRETGIPRTKNIVSNILAAVDNLWHLKGGLYAAVLKDLQDGGSKQKASSNL 205
D ++++ + +K V+ I+ D L L A+ + +DG S A +L
Sbjct: 153 DK--EELDDKLANRVQVSKRAVAKIVQVFDRLMQRNEKLMLALKGESEDGKSPALAPPDL 210
Query: 206 -----------QSEVKNLRLALMDLHLKHKSLTRELQSRQDIDAKDKAKLNRLKGELESA 254
+E +NL+ LH K +++ +L QD+ + + L+ +++
Sbjct: 211 DESLRQTYIDVMAENRNLQTQNTLLHEKFHTISLKLSEYQDMLNGKETEAAELRNQIDDL 270
Query: 255 VKELEECNCK 264
ELE+ C+
Sbjct: 271 QYELEKVRCR 280
>gi|357489895|ref|XP_003615235.1| Alkaline alpha galactosidase I [Medicago truncatula]
gi|355516570|gb|AES98193.1| Alkaline alpha galactosidase I [Medicago truncatula]
Length = 465
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 445 RKEIIAEFRALVSSFPEDMSAMQRQLSKYKEAALDIHILRADVLSLTNVLERKVKECETL 504
R +I AEFR + S+ ++M M+ QL + K+AAL LR K E ++L
Sbjct: 162 RNDIKAEFRVISSALSKEMGMMETQLKRSKDAALKAVALR-----------EKTSELKSL 210
Query: 505 LASSADQVAEIHKLQAMVQDLTDSNLELKLILDMYRRE 542
A+QV EI +A+++ L + N EL+ +L+MY E
Sbjct: 211 TIKCAEQVLEIKSSKALIEKLQEENQELEFVLEMYGLE 248
>gi|23618895|ref|NP_703201.1| E3 ubiquitin-protein ligase BRE1B [Rattus norvegicus]
gi|81900544|sp|Q8CJB9.1|BRE1B_RAT RecName: Full=E3 ubiquitin-protein ligase BRE1B; Short=BRE1-B;
AltName: Full=RING finger protein 40; AltName:
Full=Syntaxin-1-interacting RING finger protein;
Short=Protein staring
gi|23268469|gb|AAN16401.1|AF352815_1 staring [Rattus norvegicus]
gi|149067707|gb|EDM17259.1| ring finger protein 40, isoform CRA_d [Rattus norvegicus]
Length = 1002
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 67/128 (52%), Gaps = 8/128 (6%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D+ VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLNREEKTTTTLIEPIRLGGISSTEE--MDSKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLES---CSMRARE-SSNGQE-SRCL- 115
L + +L++RQ D+TL +VN+ W +L +E+ C RE SS+G E C
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEALLQCYENQRELSSSGTEVPGCQE 130
Query: 116 SIIEDVTP 123
+ DV P
Sbjct: 131 GLTRDVIP 138
>gi|149067706|gb|EDM17258.1| ring finger protein 40, isoform CRA_c [Rattus norvegicus]
Length = 1013
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 67/128 (52%), Gaps = 8/128 (6%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D+ VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLNREEKTTTTLIEPIRLGGISSTEE--MDSKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLES---CSMRARE-SSNGQE-SRCL- 115
L + +L++RQ D+TL +VN+ W +L +E+ C RE SS+G E C
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEALLQCYENQRELSSSGTEVPGCQE 130
Query: 116 SIIEDVTP 123
+ DV P
Sbjct: 131 GLTRDVIP 138
>gi|149067704|gb|EDM17256.1| ring finger protein 40, isoform CRA_a [Rattus norvegicus]
Length = 936
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 67/128 (52%), Gaps = 8/128 (6%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D+ VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLNREEKTTTTLIEPIRLGGISSTEE--MDSKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLES---CSMRARE-SSNGQE-SRCL- 115
L + +L++RQ D+TL +VN+ W +L +E+ C RE SS+G E C
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEALLQCYENQRELSSSGTEVPGCQE 130
Query: 116 SIIEDVTP 123
+ DV P
Sbjct: 131 GLTRDVIP 138
>gi|195173416|ref|XP_002027487.1| GL10311 [Drosophila persimilis]
gi|194114388|gb|EDW36431.1| GL10311 [Drosophila persimilis]
Length = 1047
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
+ G+P K+ HF + P S +++D VL+FQN+KL Q++E +
Sbjct: 22 AAAGQPPIKKVHFEP----------HLIGPVSTLEEMDIKVLEFQNKKLAQRIEQRMRTE 71
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDL 96
+ L ++ QL++RQ D+ L VVN+ W +L D+
Sbjct: 72 AELRHRIEQLEKRQTQDDAVLNVVNRYWNQLNEDI 106
>gi|125978188|ref|XP_001353127.1| GA10386 [Drosophila pseudoobscura pseudoobscura]
gi|54641878|gb|EAL30628.1| GA10386 [Drosophila pseudoobscura pseudoobscura]
Length = 1047
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
+ G+P K+ HF + P S +++D VL+FQN+KL Q++E +
Sbjct: 22 AAAGQPPIKKVHFEP----------HLIGPVSTLEEMDIKVLEFQNKKLAQRIEQRMRTE 71
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDL 96
+ L ++ QL++RQ D+ L VVN+ W +L D+
Sbjct: 72 AELRHRIEQLEKRQTQDDAVLNVVNRYWNQLNEDI 106
>gi|25012540|gb|AAN71372.1| RE34950p [Drosophila melanogaster]
Length = 1044
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
+ G+P K+ HF + P S +++D VL+FQN+KL Q++E +
Sbjct: 19 AAAGQPPIKKVHFEP----------HLIGPVSTLEEMDIKVLEFQNKKLAQRIEQRMRTE 68
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDL 96
+ L ++ QL++RQ D+ L VVN+ W +L D+
Sbjct: 69 AELRHRIEQLEKRQTQDDAVLNVVNRYWNQLNEDI 103
>gi|24658707|ref|NP_647989.2| Bre1 [Drosophila melanogaster]
gi|74948427|sp|Q9VRP9.2|BRE1_DROME RecName: Full=E3 ubiquitin-protein ligase Bre1; AltName: Full=dBre1
gi|23094129|gb|AAF50744.2| Bre1 [Drosophila melanogaster]
gi|226958696|gb|ACO95725.1| FI09417p [Drosophila melanogaster]
Length = 1044
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
+ G+P K+ HF + P S +++D VL+FQN+KL Q++E +
Sbjct: 19 AAAGQPPIKKVHFEP----------HLIGPVSTLEEMDIKVLEFQNKKLAQRIEQRMRTE 68
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDL 96
+ L ++ QL++RQ D+ L VVN+ W +L D+
Sbjct: 69 AELRHRIEQLEKRQTQDDAVLNVVNRYWNQLNEDI 103
>gi|194867223|ref|XP_001972024.1| GG14111 [Drosophila erecta]
gi|190653807|gb|EDV51050.1| GG14111 [Drosophila erecta]
Length = 1044
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
+ G+P K+ HF + P S +++D VL+FQN+KL Q++E +
Sbjct: 19 AAAGQPPIKKVHFEP----------HLIGPVSTLEEMDIKVLEFQNKKLAQRIEQRMRTE 68
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDL 96
+ L ++ QL++RQ D+ L VVN+ W +L D+
Sbjct: 69 AELRHRIEQLEKRQTQDDAVLNVVNRYWNQLNEDI 103
>gi|195337725|ref|XP_002035476.1| GM13896 [Drosophila sechellia]
gi|194128569|gb|EDW50612.1| GM13896 [Drosophila sechellia]
Length = 1044
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
+ G+P K+ HF + P S +++D VL+FQN+KL Q++E +
Sbjct: 19 AAAGQPPIKKVHFEP----------HLIGPVSTLEEMDIKVLEFQNKKLAQRIEQRMRTE 68
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDL 96
+ L ++ QL++RQ D+ L VVN+ W +L D+
Sbjct: 69 AELRHRIEQLEKRQTQDDAVLNVVNRYWNQLNEDI 103
>gi|195552622|ref|XP_002076513.1| GD17597 [Drosophila simulans]
gi|194202124|gb|EDX15700.1| GD17597 [Drosophila simulans]
Length = 1044
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
+ G+P K+ HF + P S +++D VL+FQN+KL Q++E +
Sbjct: 19 AAAGQPPIKKVHFEP----------HLIGPVSTLEEMDIKVLEFQNKKLAQRIEQRMRTE 68
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDL 96
+ L ++ QL++RQ D+ L VVN+ W +L D+
Sbjct: 69 AELRHRIEQLEKRQTQDDAVLNVVNRYWNQLNEDI 103
>gi|195492068|ref|XP_002093832.1| GE20535 [Drosophila yakuba]
gi|194179933|gb|EDW93544.1| GE20535 [Drosophila yakuba]
Length = 1044
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
+ G+P K+ HF + P S +++D VL+FQN+KL Q++E +
Sbjct: 19 AAAGQPPIKKVHFEP----------HLIGPVSTLEEMDIKVLEFQNKKLAQRIEQRMRTE 68
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDL 96
+ L ++ QL++RQ D+ L VVN+ W +L D+
Sbjct: 69 AELRHRIEQLEKRQTQDDAVLNVVNRYWNQLNEDI 103
>gi|195428767|ref|XP_002062437.1| GK17536 [Drosophila willistoni]
gi|194158522|gb|EDW73423.1| GK17536 [Drosophila willistoni]
Length = 1067
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
+ G+P K+ HF + P S +++D VL+FQN+KL Q++E +
Sbjct: 22 AAAGQPPIKKVHFEP----------HLIGPVSTLEEMDIKVLEFQNKKLAQRIEQRMRTE 71
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDL 96
+ L ++ QL++RQ D+ L VVN+ W +L D+
Sbjct: 72 AELRHRIEQLEKRQTQDDAVLNVVNRYWNQLNEDI 106
>gi|359479422|ref|XP_002272764.2| PREDICTED: uncharacterized protein LOC100246450 [Vitis vinifera]
Length = 626
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%)
Query: 23 TAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEYSALENKFAQLKERQQPYDSTL 82
+A + PF S + +D LQ QNQ LVQ+LE QK E LE++ +LK+R YD
Sbjct: 106 SAGRKPFSVSPSYRSVDATYLQCQNQNLVQQLEVQKHELHDLEDRIKELKDRPTSYDDMY 165
Query: 83 KVVNKSWEELITDLES 98
++ EL+ ES
Sbjct: 166 VDYHEPTLELVDSFES 181
>gi|195376855|ref|XP_002047208.1| GJ13313 [Drosophila virilis]
gi|194154366|gb|EDW69550.1| GJ13313 [Drosophila virilis]
Length = 1062
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 36/212 (16%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
+ G+P K+ HF + P S +++D VL+FQN+KL Q++E +
Sbjct: 23 AAAGQPPIKKVHFEP----------HLIGPVSTLEEMDIKVLEFQNKKLAQRIEQRMRCE 72
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSNGQESRCLSIIEDV 121
+ L ++ QL++RQ D+ L VVN+ W +L D+ R ++ +E+
Sbjct: 73 AELRHRIEQLEKRQTQDDAVLNVVNRYWNQLNEDIRVLLQRF-------DAETADELENK 125
Query: 122 TPHPSHDAFLSRLMETGATESSSADNCPNQMEEDRETGIPRTKNIVSNILAAVDNLWH-- 179
+ +FL++L S+ D +++E + +K V+ I+ +D L
Sbjct: 126 NENEVTTSFLTQL--------STWD--KEELDEKLANRVQVSKRAVAKIVQVIDRLMQRN 175
Query: 180 ------LKG-GLYAAVLKDLQDGGSKQKASSN 204
LKG GL A + GG +++ S++
Sbjct: 176 EKITHVLKGDGLAGAGAQGTTAGGDEEQQSTS 207
>gi|194750178|ref|XP_001957507.1| GF10444 [Drosophila ananassae]
gi|190624789|gb|EDV40313.1| GF10444 [Drosophila ananassae]
Length = 1080
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 5 GEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEYSAL 64
G+P K+ HF + P S +++D VL+FQN+KL Q++E + + L
Sbjct: 61 GQPPIKKVHFEP----------HLIGPVSTLEEMDIKVLEFQNKKLAQRIEQRMRTEAEL 110
Query: 65 ENKFAQLKERQQPYDSTLKVVNKSWEELITDL 96
++ QL++RQ D+ L VVN+ W +L D+
Sbjct: 111 RHRIEQLEKRQTQDDAVLNVVNRYWNQLNEDI 142
>gi|195127201|ref|XP_002008057.1| GI12042 [Drosophila mojavensis]
gi|193919666|gb|EDW18533.1| GI12042 [Drosophila mojavensis]
Length = 1062
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
+ G+P K+ HF + P S +++D VL+FQN+KL Q++E +
Sbjct: 23 AAAGQPPIKKVHFEP----------HLIGPVSTLEEMDIKVLEFQNKKLAQRIEQRMRCE 72
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDL 96
+ L ++ QL++RQ D+ L VVN+ W +L D+
Sbjct: 73 AELRHRIEQLEKRQTQDDAVLNVVNRYWNQLNEDI 107
>gi|344294401|ref|XP_003418906.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B-like isoform 1
[Loxodonta africana]
Length = 1001
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 15/144 (10%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARES----SNGQESRCLSI 117
L + +L++RQ D+TL +VN+ W +L +E+ +R ES S+G E+
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEAL-LRRHESQGELSSGTEA----- 124
Query: 118 IEDVTPHPSHDAFLSRLMETGATE 141
P HD + L E G +E
Sbjct: 125 -PGTQEGPIHDG--TPLTEPGTSE 145
>gi|312381170|gb|EFR26979.1| hypothetical protein AND_06590 [Anopheles darlingi]
Length = 1073
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 113/250 (45%), Gaps = 38/250 (15%)
Query: 31 PSSEEKKIDTAVLQFQNQKLVQKLETQKVEYSALENKFAQLKERQQPYDSTLKVVNKSWE 90
P S +++D VLQFQN+KL Q++E + S L ++ QL++RQ D+ L VVN+ W
Sbjct: 44 PISTLEEMDIKVLQFQNKKLAQRIEQRIRCESELRSRIEQLEKRQTQDDAVLNVVNRYWN 103
Query: 91 ELITDLESCSMR-----ARESSNGQESRCLSIIEDVTPHPSHDAFLSRLMETGATESSSA 145
+L D+ R A ES N E+ +VT +FL +L S+
Sbjct: 104 QLNEDIRVLLQRFDAETADESENKNEN-------EVTT-----SFLMQL--------STW 143
Query: 146 DNCPNQMEEDRETGIPRTKNIVSNILAAVDNLWHLKGGLYAAVLKDLQDGGSKQKASSNL 205
D ++++ + +K V+ I+ D L L A+ + ++ K ++L
Sbjct: 144 DK--EELDDKLANRVQVSKRAVAKIVQVFDRLMQRNEKLMLAMKGESEEAIGKGGPPADL 201
Query: 206 -----------QSEVKNLRLALMDLHLKHKSLTRELQSRQDIDAKDKAKLNRLKGELESA 254
+E +NL+ LH K +++ +L QD+ + + L+ +++
Sbjct: 202 DETLRQTYIDVMAENRNLQTQNTLLHEKFHTISLKLSEYQDMLNGKETEAAELRNQIDDL 261
Query: 255 VKELEECNCK 264
ELE+ C+
Sbjct: 262 QYELEKVRCR 271
>gi|444725788|gb|ELW66342.1| E3 ubiquitin-protein ligase BRE1B [Tupaia chinensis]
Length = 1031
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLSLEEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLES---CSMRARESSNGQESRCLSII 118
L + +L++RQ D+TL +VN+ W +L +E+ C E S+G E +
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEALLRCHENQGELSSGTE------V 124
Query: 119 EDVTPHPSHDAFLSRLMETGATE 141
P+ D + L E G +E
Sbjct: 125 PGTQEGPTRDG--TPLTEPGTSE 145
>gi|344294403|ref|XP_003418907.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B-like isoform 2
[Loxodonta africana]
Length = 901
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 15/144 (10%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARES----SNGQESRCLSI 117
L + +L++RQ D+TL +VN+ W +L +E+ +R ES S+G E+
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEAL-LRRHESQGELSSGTEA----- 124
Query: 118 IEDVTPHPSHDAFLSRLMETGATE 141
P HD + L E G +E
Sbjct: 125 -PGTQEGPIHDG--TPLTEPGTSE 145
>gi|75076748|sp|Q4R7K7.1|BRE1B_MACFA RecName: Full=E3 ubiquitin-protein ligase BRE1B; Short=BRE1-B;
AltName: Full=RING finger protein 40
gi|67969122|dbj|BAE00915.1| unnamed protein product [Macaca fascicularis]
Length = 1001
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE ID VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEE--IDLKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLES 98
L + +L++RQ D+TL +VN+ W +L +E+
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEA 107
>gi|403276878|ref|XP_003930109.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 1 [Saimiri
boliviensis boliviensis]
gi|403276882|ref|XP_003930111.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 3 [Saimiri
boliviensis boliviensis]
Length = 1001
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLES---CSMRARESSNGQESRCL--S 116
L + +L++RQ D+TL +VN+ W +L +E+ C RE S+ E+
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEALLRCHESQRELSSVPEAPGTQEG 130
Query: 117 IIEDVTPHP 125
+ D TP P
Sbjct: 131 LTCDGTPLP 139
>gi|47077096|dbj|BAD18476.1| unnamed protein product [Homo sapiens]
Length = 347
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARES 106
L + +L++RQ D+TL +VN+ W +L +E+ +R ES
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEAL-LRCHES 114
>gi|327286050|ref|XP_003227744.1| PREDICTED: e3 ubiquitin-protein ligase BRE1B-like [Anolis
carolinensis]
Length = 1029
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKANREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQAFE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEEL 92
L + +L++RQ D+TL +VN+ W++L
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWKQL 101
>gi|403276880|ref|XP_003930110.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 2 [Saimiri
boliviensis boliviensis]
Length = 901
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLES---CSMRARESSNGQESRCL--S 116
L + +L++RQ D+TL +VN+ W +L +E+ C RE S+ E+
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEALLRCHESQRELSSVPEAPGTQEG 130
Query: 117 IIEDVTPHP 125
+ D TP P
Sbjct: 131 LTCDGTPLP 139
>gi|241999404|ref|XP_002434345.1| E3 ubiquitin protein ligase Bre1, putative [Ixodes scapularis]
gi|215497675|gb|EEC07169.1| E3 ubiquitin protein ligase Bre1, putative [Ixodes scapularis]
Length = 891
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 93/213 (43%), Gaps = 34/213 (15%)
Query: 38 IDTAVLQFQNQKLVQKLETQKVEYSALENKFAQLKERQQPYDSTLKVVNKSWEELITDLE 97
+D LQFQN+KL Q+LE + + + L + QL++RQ + L VVN+ W +L DL
Sbjct: 1 MDMKTLQFQNRKLAQRLEQRIRQENELRARVEQLEKRQTSDEGVLTVVNRYWNQLNEDLR 60
Query: 98 SCSMRARESSNGQESRCLSIIEDVTPHPSHDAFLSRLMETGATESSSADNCPNQMEEDRE 157
R +S E+ + E T +FL L+ E +EE
Sbjct: 61 ILLERF-DSETSDEAEVRNEAEATT------SFLGMLLHWDREE----------LEEKLA 103
Query: 158 TGIPRTKNIVSNILAAVDNLWH--------LKGG-------LYAAVLKDLQDGGSKQKAS 202
+ + V+ +L A D L L+GG + DL++ S ++A+
Sbjct: 104 QRVQVSTRAVAKVLQAFDRLVQRNHKVMRALQGGRPNPDGEVVDGPPPDLEE--SVRQAN 161
Query: 203 SNLQSEVKNLRLALMDLHLKHKSLTRELQSRQD 235
LQ+E KNL + LH K+ L+ + QD
Sbjct: 162 VELQTENKNLHALVTSLHEKNHLLSLKFSEHQD 194
>gi|170033165|ref|XP_001844449.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167873728|gb|EDS37111.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 1020
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 115/248 (46%), Gaps = 37/248 (14%)
Query: 31 PSSEEKKIDTAVLQFQNQKLVQKLETQKVEYSA-LENKFAQLKERQQPYDSTLKVVNKSW 89
P S +++D VLQFQN+KL Q++E Q+V A L + QL++RQ D+ L VVN+ W
Sbjct: 73 PISTLEEMDIKVLQFQNKKLAQRIE-QRVRCEAELRQRIEQLEKRQTQDDAVLNVVNRYW 131
Query: 90 EELITDLESCSMR-----ARESSNGQESRCLSIIEDVTPHPSHDAFLSRLMETGATESSS 144
+L D+ R A ES N E+ +VT +FL +L S+
Sbjct: 132 NQLNEDIRVLLQRFDAETADESENKNEN-------EVTT-----SFLMQL--------ST 171
Query: 145 ADNCPNQMEEDRETGIPRTKNIVSNILAAVDNLWHLKGGLYAAVLKDLQDGGSK------ 198
D ++++ + +K V+ I+ D L + A+ + D +
Sbjct: 172 WDK--EELDDKLANRVQVSKRAVAKIVQVFDRLMQRNEKITLAMKGESDDPDANVPEIDE 229
Query: 199 --QKASSNLQSEVKNLRLALMDLHLKHKSLTRELQSRQDIDAKDKAKLNRLKGELESAVK 256
+++ + + +E +NL+ LH K +++ ++ QD+ + + LK +++
Sbjct: 230 TLRQSYTEVMAENRNLQTQNTLLHEKFHTISLKMSEIQDVLNGKETESAELKNQIDDLQY 289
Query: 257 ELEECNCK 264
ELE+ C+
Sbjct: 290 ELEKVRCR 297
>gi|157109409|ref|XP_001650655.1| hypothetical protein AaeL_AAEL000730 [Aedes aegypti]
gi|108883976|gb|EAT48201.1| AAEL000730-PA [Aedes aegypti]
Length = 982
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 116/248 (46%), Gaps = 37/248 (14%)
Query: 31 PSSEEKKIDTAVLQFQNQKLVQKLETQKVEYSA-LENKFAQLKERQQPYDSTLKVVNKSW 89
P S +++D VLQFQN+KL Q++E Q+V A L + QL++RQ D+ L VVN+ W
Sbjct: 38 PISTLEEMDIKVLQFQNKKLAQRIE-QRVRCEAELRQRIEQLEKRQTQDDAVLNVVNRYW 96
Query: 90 EELITDLESCSMR-----ARESSNGQESRCLSIIEDVTPHPSHDAFLSRLMETGATESSS 144
+L D+ R A ES N E+ +VT +FL +L S+
Sbjct: 97 NQLNEDIRVLLQRFDAETADESENKNEN-------EVTT-----SFLMQL--------ST 136
Query: 145 ADNCPNQMEEDRETGIPRTKNIVSNILAAVDNLWHLKGGLYAAVLKDLQDGGSK------ 198
D ++++ + +K V+ I+ D L + A+ + +D +
Sbjct: 137 WDK--EELDDKLANRVQVSKRAVAKIVQVFDRLMQRNDKITRAMHGESEDPEANVPDMDE 194
Query: 199 --QKASSNLQSEVKNLRLALMDLHLKHKSLTRELQSRQDIDAKDKAKLNRLKGELESAVK 256
+++ + + +E +NL+ LH K +++ ++ QD+ + + LK +++
Sbjct: 195 TLRQSYTEVMAENRNLQTQNTLLHEKFHTISLKMSEIQDMLNGKETESAELKNQIDDLQY 254
Query: 257 ELEECNCK 264
ELE+ C+
Sbjct: 255 ELEKVRCR 262
>gi|195021472|ref|XP_001985401.1| GH17039 [Drosophila grimshawi]
gi|193898883|gb|EDV97749.1| GH17039 [Drosophila grimshawi]
Length = 1046
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 10/95 (10%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
+ G+P K+ HF + P S +++D VL+FQN+KL Q++E +
Sbjct: 28 AAAGQPPIKKVHFEP----------HLIGPVSTLEEMDIKVLEFQNKKLAQRIEQRMRCE 77
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDL 96
+ ++ QL++RQ D+ L VVN+ W +L D+
Sbjct: 78 AEQRHRIEQLEKRQTQDDAVLNVVNRYWNQLNEDI 112
>gi|440911762|gb|ELR61398.1| E3 ubiquitin-protein ligase BRE1B [Bos grunniens mutus]
Length = 1002
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSNGQESR 113
L + +L++RQ D+TL +VN+ W +L +E+ +R ES SR
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEAL-LRHHESQGELSSR 121
>gi|431906852|gb|ELK10973.1| E3 ubiquitin-protein ligase BRE1B [Pteropus alecto]
Length = 1001
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 7/140 (5%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSNGQESRCLSIIEDV 121
L + +L++RQ D+TL +VN+ W +L +E+ R N E + + +
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEAL---LRHHENQGELSSGTEVPGI 127
Query: 122 TPHPSHDAFLSRLMETGATE 141
P+ D + L E G +E
Sbjct: 128 QEGPTRDE--TPLSEPGTSE 145
>gi|397471938|ref|XP_003807521.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 1 [Pan
paniscus]
gi|410224050|gb|JAA09244.1| ring finger protein 40 [Pan troglodytes]
gi|410265686|gb|JAA20809.1| ring finger protein 40 [Pan troglodytes]
gi|410354903|gb|JAA44055.1| ring finger protein 40 [Pan troglodytes]
Length = 1001
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSN 108
L + +L++RQ D+TL +VN+ W +L +E+ +R ES
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEAL-LRCHESQG 116
>gi|426381895|ref|XP_004057566.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 2 [Gorilla
gorilla gorilla]
Length = 1001
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSN 108
L + +L++RQ D+TL +VN+ W +L +E+ +R ES
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEAL-LRCHESQG 116
>gi|426381893|ref|XP_004057565.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 1 [Gorilla
gorilla gorilla]
Length = 1000
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSN 108
L + +L++RQ D+TL +VN+ W +L +E+ +R ES
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEAL-LRCHESQG 116
>gi|30584681|gb|AAP36593.1| Homo sapiens ring finger protein 40 [synthetic construct]
gi|60653785|gb|AAX29586.1| ring finger protein 40 [synthetic construct]
gi|60653787|gb|AAX29587.1| ring finger protein 40 [synthetic construct]
Length = 1002
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSN 108
L + +L++RQ D+TL +VN+ W +L +E+ +R ES
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEAL-LRCHESQG 116
>gi|7662230|ref|NP_055586.1| E3 ubiquitin-protein ligase BRE1B isoform 1 [Homo sapiens]
gi|13543994|gb|AAH06133.1| Ring finger protein 40 [Homo sapiens]
gi|15079968|gb|AAH11769.1| Ring finger protein 40 [Homo sapiens]
gi|17391423|gb|AAH18647.1| Ring finger protein 40 [Homo sapiens]
gi|119572582|gb|EAW52197.1| ring finger protein 40, isoform CRA_a [Homo sapiens]
gi|119572585|gb|EAW52200.1| ring finger protein 40, isoform CRA_a [Homo sapiens]
gi|123993535|gb|ABM84369.1| ring finger protein 40 [synthetic construct]
gi|124000569|gb|ABM87793.1| ring finger protein 40 [synthetic construct]
gi|168267490|dbj|BAG09801.1| E3 ubiquitin-protein ligase BRE1B [synthetic construct]
Length = 1001
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSN 108
L + +L++RQ D+TL +VN+ W +L +E+ +R ES
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEAL-LRCHESQG 116
>gi|402908150|ref|XP_003916817.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 1 [Papio
anubis]
gi|402908154|ref|XP_003916819.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 3 [Papio
anubis]
Length = 1001
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLES 98
L + +L++RQ D+TL +VN+ W +L +E+
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEA 107
>gi|333440440|ref|NP_001193962.1| E3 ubiquitin-protein ligase BRE1B isoform 2 [Homo sapiens]
gi|158256764|dbj|BAF84355.1| unnamed protein product [Homo sapiens]
Length = 1000
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSN 108
L + +L++RQ D+TL +VN+ W +L +E+ +R ES
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEAL-LRCHESQG 116
>gi|313104295|sp|O75150.4|BRE1B_HUMAN RecName: Full=E3 ubiquitin-protein ligase BRE1B; Short=BRE1-B;
AltName: Full=95 kDa retinoblastoma-associated protein;
Short=RBP95; AltName: Full=RING finger protein 40
Length = 1001
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSN 108
L + +L++RQ D+TL +VN+ W +L +E+ +R ES
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEAL-LRCHESQG 116
>gi|50949948|emb|CAH10518.1| hypothetical protein [Homo sapiens]
Length = 1001
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSN 108
L + +L++RQ D+TL +VN+ W +L +E+ +R ES
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEAL-LRCHESQG 116
>gi|197098878|ref|NP_001125651.1| E3 ubiquitin-protein ligase BRE1B [Pongo abelii]
gi|75061874|sp|Q5RAU7.1|BRE1B_PONAB RecName: Full=E3 ubiquitin-protein ligase BRE1B; Short=BRE1-B;
AltName: Full=RING finger protein 40
gi|55728748|emb|CAH91113.1| hypothetical protein [Pongo abelii]
Length = 1001
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSN 108
L + +L++RQ D+TL +VN+ W +L +E+ +R ES
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEAL-LRCHESQG 116
>gi|410984766|ref|XP_003998697.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B [Felis catus]
Length = 1001
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 66/128 (51%), Gaps = 9/128 (7%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARES----SNGQESRCL-- 115
L + +L++RQ D+TL +VN+ W +L +E+ +R ES S+G E+
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEAL-LRHHESQGELSSGTEAPGTQE 129
Query: 116 SIIEDVTP 123
+ D TP
Sbjct: 130 GLTRDETP 137
>gi|40788319|dbj|BAA31636.2| KIAA0661 protein [Homo sapiens]
Length = 1030
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 42 GGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 99
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSN 108
L + +L++RQ D+TL +VN+ W +L +E+ +R ES
Sbjct: 100 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEAL-LRCHESQG 145
>gi|384950604|gb|AFI38907.1| E3 ubiquitin-protein ligase BRE1B isoform 1 [Macaca mulatta]
Length = 1001
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLES 98
L + +L++RQ D+TL +VN+ W +L +E+
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEA 107
>gi|397471940|ref|XP_003807522.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 2 [Pan
paniscus]
Length = 901
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSN 108
L + +L++RQ D+TL +VN+ W +L +E+ +R ES
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEAL-LRCHESQG 116
>gi|207080094|ref|NP_001128807.1| DKFZP459F026 protein [Pongo abelii]
gi|55729081|emb|CAH91277.1| hypothetical protein [Pongo abelii]
Length = 961
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSN 108
L + +L++RQ D+TL +VN+ W +L +E+ +R ES
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEAL-LRCHESQG 116
>gi|432116997|gb|ELK37566.1| E3 ubiquitin-protein ligase BRE1B [Myotis davidii]
Length = 1012
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 108/239 (45%), Gaps = 32/239 (13%)
Query: 17 ISPTAATAKKNPFFPS--SEEKKIDTAVLQFQNQKLVQKLETQKVEYSALENKFAQLKER 74
+S AATA + P S +++D VL+F+N+KL ++LE ++ L + +L++R
Sbjct: 53 LSLEAATALRGPVRLGDISLTEEMDLKVLRFKNKKLSERLEQRQACEDELRERIEKLEKR 112
Query: 75 QQPYDSTLKVVNKSWEELITDLESCSMR---ARESSNG------QESRCLSIIEDVTPH- 124
Q D+TL +VN+ W +L +E+ R RE S+G Q R + E +
Sbjct: 113 QATDDATLLIVNRYWAQLEVTVEALLRRLEKQRELSSGTQPPGAQGGRTSELRETLPTQR 172
Query: 125 --PSHDAFLSRLMETGATESSSADNCPNQMEEDRETGIPRTKNIVSNILAAVDNLWHLKG 182
P + L+ ++ GA+ SS QME +K VS ++ A + H
Sbjct: 173 RPPLSEPALAFPVKQGAS-SSEEVGLQGQME--------FSKAAVSRVVEASARIQHQVE 223
Query: 183 GLYAAVLKDLQDGGSKQKASS------NLQSEVKNLRLALMDLHLKHKSLTRELQSRQD 235
GL V GG + ++ + +L E + L+ +L KH ++ E QD
Sbjct: 224 GLCRRVCS---RGGGEPRSEAARARTRDLGCENRRLQALATELQEKHHGISLEYAELQD 279
>gi|402908152|ref|XP_003916818.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 2 [Papio
anubis]
Length = 901
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLES 98
L + +L++RQ D+TL +VN+ W +L +E+
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEA 107
>gi|333440442|ref|NP_001193963.1| E3 ubiquitin-protein ligase BRE1B isoform 3 [Homo sapiens]
gi|119572583|gb|EAW52198.1| ring finger protein 40, isoform CRA_b [Homo sapiens]
Length = 901
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSN 108
L + +L++RQ D+TL +VN+ W +L +E+ +R ES
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEAL-LRCHESQG 116
>gi|330340457|ref|NP_001193381.1| E3 ubiquitin-protein ligase BRE1B [Bos taurus]
gi|296473193|tpg|DAA15308.1| TPA: ring finger protein 40 [Bos taurus]
Length = 1001
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 62/115 (53%), Gaps = 7/115 (6%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARES----SNGQES 112
L + +L++RQ D+TL +VN+ W +L +E+ +R ES S+G E+
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEAL-LRHHESQGELSSGTEA 124
>gi|338712880|ref|XP_001495920.3| PREDICTED: e3 ubiquitin-protein ligase BRE1B isoform 1 [Equus
caballus]
Length = 1001
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLES 98
L + +L++RQ D+TL +VN+ W +L +E+
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEA 107
>gi|390471519|ref|XP_002807467.2| PREDICTED: E3 ubiquitin-protein ligase BRE1B [Callithrix jacchus]
Length = 948
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSN 108
L + +L++RQ D+TL +VN+ W +L +E+ +R ES
Sbjct: 71 DELRERIEKLEKRQATDDATLFIVNRYWAQLDETVEAL-LRCHESQG 116
>gi|426254593|ref|XP_004020961.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 1 [Ovis aries]
Length = 1001
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 62/115 (53%), Gaps = 7/115 (6%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARES----SNGQES 112
L + +L++RQ D+TL +VN+ W +L +E+ +R ES S+G E+
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEAL-LRHHESQGELSSGTEA 124
>gi|301778801|ref|XP_002924807.1| PREDICTED: e3 ubiquitin-protein ligase BRE1B-like [Ailuropoda
melanoleuca]
gi|281352711|gb|EFB28295.1| hypothetical protein PANDA_014222 [Ailuropoda melanoleuca]
Length = 1001
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 62/115 (53%), Gaps = 7/115 (6%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARES----SNGQES 112
L + +L++RQ D+TL +VN+ W +L +E+ +R ES S+G E+
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEAL-LRHHESQGELSSGTEA 124
>gi|345801553|ref|XP_848895.2| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 2 [Canis lupus
familiaris]
Length = 1000
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLES 98
L + +L++RQ D+TL +VN+ W +L +E+
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEA 107
>gi|332845787|ref|XP_003315121.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B [Pan troglodytes]
Length = 951
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 70 GGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 127
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSN 108
L + +L++RQ D+TL +VN+ W +L +E+ +R ES
Sbjct: 128 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEAL-LRCHESQG 173
>gi|338712882|ref|XP_003362789.1| PREDICTED: e3 ubiquitin-protein ligase BRE1B isoform 2 [Equus
caballus]
Length = 901
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLES 98
L + +L++RQ D+TL +VN+ W +L +E+
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEA 107
>gi|119572584|gb|EAW52199.1| ring finger protein 40, isoform CRA_c [Homo sapiens]
Length = 838
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSN 108
L + +L++RQ D+TL +VN+ W +L +E+ +R ES
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEAL-LRCHESQG 116
>gi|357624659|gb|EHJ75355.1| hypothetical protein KGM_09234 [Danaus plexippus]
Length = 915
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 108/258 (41%), Gaps = 57/258 (22%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
+ +P K+ HF + P S +++D VLQFQN+KL Q++E +
Sbjct: 11 NGSSQPPIKKVHFEP----------HLIGPVSTLEEMDIKVLQFQNKKLAQRIEQRHRCE 60
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMR-----ARESSNGQESRCLS 116
+ L + QL++RQ D+ L VVN+ W L D+ R A ES N E+
Sbjct: 61 AELRARIEQLEKRQTQDDAVLCVVNRYWNLLNEDIRVLLQRFDAETADESENKNEN---- 116
Query: 117 IIEDVTPHPSHDAFLSRLMETGATESSSAD-NCPNQMEEDRETGIPRTKNIVSNILAAVD 175
+A S LM+ + D N+ + +K V+ +L A D
Sbjct: 117 -----------EATTSFLMQLSTWDKEELDAQLANR--------VQVSKRAVAKVLQAFD 157
Query: 176 NLWHLKGGLYAAVLKDLQDGGSKQKA----------SSNLQSEVKNLRLALM--DLHLKH 223
L ++ A+ G S++ A ++N + V+N RL + LH H
Sbjct: 158 RLQQRNDKIWRAI-----KGESEESAPAPSLDEVIRATNEEVTVENRRLQALCTTLHESH 212
Query: 224 KSLTRELQSRQD-IDAKD 240
++T + QD ++++D
Sbjct: 213 HAMTLRVAQLQDAVNSRD 230
>gi|335284373|ref|XP_003354586.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
BRE1B-like [Sus scrofa]
Length = 1021
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 62/115 (53%), Gaps = 7/115 (6%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLNREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARES----SNGQES 112
L + +L++RQ D+TL +VN+ W +L +E+ +R ES S+G E+
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEAL-LRHHESQGELSSGPEA 124
>gi|426254595|ref|XP_004020962.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 2 [Ovis aries]
Length = 901
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLES 98
L + +L++RQ D+TL +VN+ W +L +E+
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEA 107
>gi|126334514|ref|XP_001364447.1| PREDICTED: e3 ubiquitin-protein ligase BRE1B [Monodelphis
domestica]
Length = 1014
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 7/140 (5%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G ++K+ + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPSEKKQNREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSMRARESSNGQESRCLSIIEDV 121
L + +L++RQ D+TL +VN+ W +L +E + R G+ LS ED+
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVE--VLLRRHEGRGE---LLSRAEDL 125
Query: 122 TPHPSHDAFLSRLMETGATE 141
+ + L E G TE
Sbjct: 126 GAQDVTEPDGTSLPEPGTTE 145
>gi|147804779|emb|CAN76022.1| hypothetical protein VITISV_027071 [Vitis vinifera]
Length = 738
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 83/196 (42%), Gaps = 55/196 (28%)
Query: 32 SSEEKKIDTAVLQFQNQKLVQKLETQKVEYSALENKFAQLKERQQPYDSTLKVVNKSWEE 91
S + + +D +Q+QNQKLVQ+LE QK E LE+K +LK+ Q YD L
Sbjct: 8 SPDNRSVDATYVQYQNQKLVQQLEVQKHELHDLEDKTKELKDIQTSYDDIL--------- 58
Query: 92 LITDLESCSMRARESSNGQESRCLSIIEDVTPHPSHDAFLSRLMETGATESSSADNCPNQ 151
LE+ S+ SNG +D + + E A SS
Sbjct: 59 ----LETDSV----ESNG-----------------NDGIIKYVEEALALRHSSTLELMKS 93
Query: 152 MEEDRETGIPRTKNIVSNI---LAAVDNLWHLKGGLYAAVLKDLQDGGSKQKASSNLQSE 208
+E+ +T +TKNI + L+A + + L + + DL ++ E
Sbjct: 94 LEDTIDTQRVKTKNIAQALHGKLSAENAIIQL------SKIDDL------------MKEE 135
Query: 209 VKNLRLALMDLHLKHK 224
NLR + LHLKHK
Sbjct: 136 ANNLREVIDALHLKHK 151
>gi|351711445|gb|EHB14364.1| E3 ubiquitin-protein ligase BRE1B [Heterocephalus glaber]
Length = 1000
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++K + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLES 98
L + +L++RQ D TL +VN+ W +L +E+
Sbjct: 71 DELRERIEKLEKRQATDDVTLLIVNRYWAQLDETVEA 107
>gi|417405562|gb|JAA49490.1| Putative e3 ubiquitin ligase involved in syntaxin degradation
[Desmodus rotundus]
Length = 1000
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 8/127 (6%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G P++ R + + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPPEKLSREEKTTT-TLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 69
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESC---SMRARESSNGQESRCL--S 116
L + +L++RQ D+TL +VN+ W +L +E+ RE S+G E+
Sbjct: 70 DELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEALLRHHENQRELSSGTEASGTQEG 129
Query: 117 IIEDVTP 123
+ D TP
Sbjct: 130 LTRDETP 136
>gi|345317695|ref|XP_001521737.2| PREDICTED: E3 ubiquitin-protein ligase BRE1B-like, partial
[Ornithorhynchus anatinus]
Length = 874
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 24/137 (17%)
Query: 35 EKKIDTAVLQFQNQKLVQKLETQKVEYSALENKFAQLKERQQPYDSTLKVVNKSWEELIT 94
++++D VLQF+N+KL ++LE ++ L + +L++RQ D+TL +VN+ W +L
Sbjct: 2 QEEMDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIVNRYWAQLDE 61
Query: 95 DLESCSMRARESSNGQESRCLSIIEDVTPHPSHDAFLSRLMETGATESSSADNCP---NQ 151
+E+ + H SR E G E D P
Sbjct: 62 TVEAL---------------------LRHHEGRGEPPSRTEEPGTQECPEPDGAPVAEAG 100
Query: 152 MEEDRETGIPRTKNIVS 168
E RE +P+ + +S
Sbjct: 101 TPERREPPVPQLRPPLS 117
>gi|395514874|ref|XP_003761636.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 1 [Sarcophilus
harrisii]
Length = 1014
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
G +G ++K+ + T + S+EE +D VLQF+N+KL ++LE ++
Sbjct: 13 GGSGPSEKKQNREEKTTTTLIEPIRLGGISSTEE--MDLKVLQFKNKKLAERLEQRQACE 70
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEEL 92
L + +L++RQ D+TL +VN+ W +L
Sbjct: 71 DELRERIEKLEKRQATDDATLLIVNRYWAQL 101
>gi|348502513|ref|XP_003438812.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B-like [Oreochromis
niloticus]
Length = 940
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Query: 32 SSEEKKIDTAVLQFQNQKLVQKLETQKVEYSALENKFAQLKERQQPYDSTLKVVNKSWEE 91
S+EE +D VLQF+N+KL ++LE ++ L K +L++RQ D+TL +VN+ W +
Sbjct: 45 STEE--MDMKVLQFKNKKLCERLEQRQAMEDELREKIEKLEKRQATDDTTLLIVNRYWSQ 102
Query: 92 L 92
L
Sbjct: 103 L 103
>gi|427788661|gb|JAA59782.1| Putative bre1 [Rhipicephalus pulchellus]
Length = 906
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 38 IDTAVLQFQNQKLVQKLETQKVEYSALENKFAQLKERQQPYDSTLKVVNKSWEELITDL 96
+D LQFQN+KL Q+L+ + + S L + QL++RQ + L VVN+ W +L DL
Sbjct: 1 MDMKTLQFQNRKLAQRLDQRIRQESELRARVEQLEKRQTSDEGVLTVVNRYWNQLNEDL 59
>gi|301622630|ref|XP_002940628.1| PREDICTED: e3 ubiquitin-protein ligase BRE1B [Xenopus (Silurana)
tropicalis]
Length = 991
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 7 PDRKRRHFSSISPTAATAKKNPF----FPSSEEKKIDTAVLQFQNQKLVQKLETQKVEYS 62
P K+ + + +PT P S+EE +D VLQF+N+KL ++LE ++
Sbjct: 17 PSEKKPNLEAKTPTTLI---EPIRLGGISSTEE--MDMKVLQFKNKKLAERLEQRQGFED 71
Query: 63 ALENKFAQLKERQQPYDSTLKVVNKSWEELITDL 96
L K +L++RQ D+TL +VN+ W +L D+
Sbjct: 72 ELREKIEKLEKRQATDDATLLIVNRYWSKLDEDV 105
>gi|405957579|gb|EKC23781.1| E3 ubiquitin-protein ligase Bre1 [Crassostrea gigas]
Length = 1004
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%)
Query: 38 IDTAVLQFQNQKLVQKLETQKVEYSALENKFAQLKERQQPYDSTLKVVNKSWEELITDL 96
+D VL+FQN+KL +++E +K L+ + QL+ RQ+ D+ L +VN+ W +L D+
Sbjct: 48 LDMKVLRFQNKKLAERVEQRKRAEDELKRRIDQLENRQRTDDAVLMIVNRYWNQLDDDI 106
>gi|410895743|ref|XP_003961359.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B-like isoform 2
[Takifugu rubripes]
Length = 935
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Query: 32 SSEEKKIDTAVLQFQNQKLVQKLETQKVEYSALENKFAQLKERQQPYDSTLKVVNKSWEE 91
S+EE +D V+QF+N+KL ++LE ++ L K +L++RQ D+TL +VN+ W +
Sbjct: 45 STEE--MDMKVIQFKNKKLCERLEQRQAMEDELREKIEKLEKRQATDDTTLLIVNRYWSQ 102
Query: 92 L 92
L
Sbjct: 103 L 103
>gi|198436405|ref|XP_002119407.1| PREDICTED: similar to ring finger protein 20 isoform 2 [Ciona
intestinalis]
Length = 909
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
+ EP KR ++I P + P + +++D +L+FQN+KL +K+E ++
Sbjct: 13 SDSDEPQAKR--PTTILPAVSIG------PVASLEEMDLKMLKFQNKKLWEKIEIRRQAE 64
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEEL 92
LE++ ++ +Q D+TL +VN+ W++L
Sbjct: 65 RELEDQIETMEAKQTATDATLSLVNRYWDQL 95
>gi|198436403|ref|XP_002119359.1| PREDICTED: similar to ring finger protein 20 isoform 1 [Ciona
intestinalis]
Length = 941
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 2 GSTGEPDRKRRHFSSISPTAATAKKNPFFPSSEEKKIDTAVLQFQNQKLVQKLETQKVEY 61
+ EP KR ++I P + P + +++D +L+FQN+KL +K+E ++
Sbjct: 13 SDSDEPQAKR--PTTILPAVSIG------PVASLEEMDLKMLKFQNKKLWEKIEIRRQAE 64
Query: 62 SALENKFAQLKERQQPYDSTLKVVNKSWEEL 92
LE++ ++ +Q D+TL +VN+ W++L
Sbjct: 65 RELEDQIETMEAKQTATDATLSLVNRYWDQL 95
>gi|384252954|gb|EIE26429.1| hypothetical protein COCSUDRAFT_46084 [Coccomyxa subellipsoidea
C-169]
Length = 845
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 116/550 (21%), Positives = 220/550 (40%), Gaps = 72/550 (13%)
Query: 42 VLQFQNQKLVQKLETQKVEYSALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCSM 101
+L +QN KL +LE Q+ E +ALE K +Q+ +Q Y+ TL V++ W +L D+ +
Sbjct: 1 MLTYQNGKLSAQLEVQRKEIAALEAKVSQMDNKQIDYEQTLSCVDRLWTQLNDDILFLTK 60
Query: 102 RARESSNGQESRCLSIIEDVTPHPSH---------------------DAFLSRLMETGAT 140
R ++ ED + PSH D FL RL+ + +
Sbjct: 61 RT------------ALEEDTSEAPSHSGQDHLTSNGSSPGKGAQTISDPFLQRLVWSHSA 108
Query: 141 ESSSADNCPNQMEEDR---ETGIPRTKNIVSNILAAVDNLWHLKGGLYAAVLKDLQDGGS 197
S + ++ ED ET + R LA + +L + A + L
Sbjct: 109 ASKAVAAKSKELTEDATEVETALLRRSESTKACLARLLDLQSQQEQRVADLASRL----- 163
Query: 198 KQKASSNLQSEVKNLRLALMDLHL------KHKSLTRELQSRQ----DIDAKDKAKLNRL 247
+ A LQ EVK AL + K++ R L +Q D KD+ + L
Sbjct: 164 GKDAEVALQDEVKR---ALSEAAAGRRELDAQKAINRALDEQQRTLEDQRMKDEVTIRDL 220
Query: 248 KGELESAVKELEECNCKLAALRAERDVTKGAFFPVLNLGNKHVAGDRVRDEQRDLRDMES 307
EL +E+ KL R +V G P + + D
Sbjct: 221 TNELADKSEEVAATQRKLLLARTN-NVADGPPLPCKPEVKQEASALHPNDNNAAAALDAE 279
Query: 308 VHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQNTLKSVKCLSSSKAFLSVKNQLEKSK 367
+++L+++ EL + +K+ +++ +Q ++ + S+ + + ++ ++
Sbjct: 280 ENRKLLEKRE---AELDAEKESNLKLQREVRGMQESIAKGSFVPESQLYQQAQREIHAAR 336
Query: 368 SEVFKYQALFEKLQVEKDNLAWRETELNMKIDLVDVFRRSSAVTDSKIADLGIEIQKQID 427
+ + + L LQ E+ L R+ +++ + R A+ + + DL E+Q+
Sbjct: 337 EDAERQRLLISTLQQERAVLQSRQQSQELQVKQGEHAMRMLALANKREQDLEKELQRARA 396
Query: 428 EKNRIEMRLEEASREPGRKEIIAEFRALVSSFPEDMSAMQRQLSKYKEAALDIHILRADV 487
+ +++ + G+ +AE + V + ++ +Q ++++K AA + R +
Sbjct: 397 ASDDADLKWQVERHRMGQTRTLAELQQHVEALQKEKKVLQANVAQHKAAADRAALARQEA 456
Query: 488 LSLTNVLERKVKECETL---LASSADQVAE-----------IHKLQAMVQDLTDSNLELK 533
SL L+ K E E L LA +AE LQ V+ L + + + +
Sbjct: 457 QSLLTALKAKEIEVEHLQQRLAEKDGHIAEARTSEEEAKVKAQNLQVFVEVLLNCSEDPR 516
Query: 534 LILDMYRRES 543
ILD+ E+
Sbjct: 517 EILDIRASEA 526
>gi|391328026|ref|XP_003738494.1| PREDICTED: E3 ubiquitin-protein ligase Bre1-like [Metaseiulus
occidentalis]
Length = 906
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 18 SPTAATAKKNPF--FPSSEEKKIDTAVLQFQNQKLVQKLETQKVEYSALENKFAQLKERQ 75
P A PF S + +DT LQFQN+KL Q+LE + L ++ QL++RQ
Sbjct: 10 GPPAKKVHFEPFRIGAVSNLEDLDTRTLQFQNRKLAQRLEQRLRHEQELRSRIEQLEKRQ 69
Query: 76 QPYDSTLKVVNKSWEELITDL 96
Q ++ + +N+ W + +L
Sbjct: 70 QSDENVITTINRYWNQFNEEL 90
>gi|291232119|ref|XP_002735992.1| PREDICTED: ring finger protein 40-like [Saccoglossus kowalevskii]
Length = 698
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 16 SISPTAATAKKNPFFPS-----SEEKKIDTAVLQFQNQKLVQKLETQKVEYSALENKFAQ 70
S S + KK F P S ++++D VL+FQN+KL +LE +K L ++ +
Sbjct: 13 STSSSTPPTKKTLFDPVQLGSVSSQEEMDIKVLKFQNKKLADRLELRKTVEEDLRDRIQR 72
Query: 71 LKERQQPYDSTLKVVNKSWEELITDL 96
L+ RQ ++ L ++N+ W +L D+
Sbjct: 73 LERRQGNDEAVLCLLNRYWSQLDEDI 98
>gi|303274855|ref|XP_003056742.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461094|gb|EEH58387.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 837
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 41 AVLQFQNQKLVQKLETQKVEYSALENKFAQLKERQQPYDSTLKVVNKSWEELITDLESCS 100
A+LQF++ +L Q+LE + E ++ E + A L+ +Q Y+ + VV W L D+ C+
Sbjct: 7 ALLQFKSGQLKQRLEVYRQEIASAEAEAASLRRKQAAYEERINVVASEWNTLQDDV--CA 64
Query: 101 MRARESSNGQESRCLSIIEDVTPHPSHDAFLSRLMET 137
+ AR S DV+ D FL RL++T
Sbjct: 65 LAARAGVAPAAS-----TNDVSHADVKDPFLRRLLQT 96
>gi|378728849|gb|EHY55308.1| hypothetical protein HMPREF1120_03450 [Exophiala dermatitidis
NIH/UT8656]
Length = 1114
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 97/432 (22%), Positives = 189/432 (43%), Gaps = 59/432 (13%)
Query: 108 NGQESRCLSIIEDVTPHPSHDAFLSRLMETGATESSSADNCPNQMEEDRETGIPRTKNIV 167
+ ++ RC ++ +++ H A L ++ + ++ A E+R+ + + + +
Sbjct: 469 DAEKERCTNLSKEIEAHTRTAAELEEKHKSAESHAAKA--------EERQGTLVKELDAL 520
Query: 168 SNILAAVDNLWHLKGGLYAAVLKDLQDGGSKQKASSNLQSEVKNLRLALMDLHLKHKSLT 227
LAA + G + +K+L+ S+Q A Q+ + L DL +K +
Sbjct: 521 KETLAAESARYAAVDGQHGERIKELE--ASEQTA----QTALDEANAKLNDLEEANKKVE 574
Query: 228 RELQSR-QDIDAKDKAKLNRLKGELESAVKELEECNCKLAALRAER----DVTKGAFFPV 282
EL+++ Q I A ++ K + + G+LE+A + LE+ K+AAL E+ D A
Sbjct: 575 SELETKLQAIKAYEEEK-DVITGQLENAQQALEDAQSKIAALETEKLQLADTLSEALLAA 633
Query: 283 LNLGNKHVAGDRVRDEQRDLRDMESVHKELMDQASHQLLELKGLHDGRIKVLQQLYNLQN 342
A + D+ L + KE +D AS Q ++ L R K+++ + L
Sbjct: 634 ------RTATESNTDQISGLEAENAKLKEELDAASKQAQKVTELEAERTKLVEAIETLNG 687
Query: 343 TLKS----VKCLSSSKAFLSVKNQLEKSKSEVFKYQALFEKLQVEKDNLAWRETEL---- 394
+ + + L + KA L +E +++E Q ++ EK +LA + EL
Sbjct: 688 EVSTAAGRIPDLEAEKAKLVA--DVEAAETEQKALQDKLVNVEAEKSDLASKIDELAKSA 745
Query: 395 NMKIDLVDVFRRSSAVTDSK--------------IADLGIEIQKQIDEKNRIEMRLEEAS 440
N K + +++ + + + D+K IA+L +I++ E + +L+ A
Sbjct: 746 NAKDEALELAKSAKSEADTKLEEAEKARLEAEGRIAELETQIKRSKTEDEELSSKLQTAE 805
Query: 441 REPGRKEIIAEFRALVSSFPEDMSAMQRQLSKYKEAALDIHILRADVLSLTNV--LERKV 498
E G E + + L S ++ ++ +L AA D + +A S + LE KV
Sbjct: 806 TEKGALET--QLKELEQSQSTAIAELESKL-----AAADEALQQAGESSRVTIKELEDKV 858
Query: 499 KECETLLASSAD 510
ETL S+++
Sbjct: 859 ASAETLCKSTSE 870
>gi|345777168|ref|XP_531770.3| PREDICTED: GRIP and coiled-coil domain-containing protein 2 [Canis
lupus familiaris]
Length = 1681
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 16/180 (8%)
Query: 155 DRETGIPRTKNIVSNILAAVD-NLWHLKGGLYAAVLKDLQDGGSKQKA----SSNLQSEV 209
D E + + + + NI A + + +L+ L AA + Q+ Q+ S + Q ++
Sbjct: 175 DCEDKVKKLQEEIQNIRPAFEEQILYLQNQLRAATNEKEQEITRLQEVIEANSQHYQKDI 234
Query: 210 KNLRLALMDLHLKHKSLTRELQSRQDIDAK-DKAKLNRLKGELESAVKEL--------EE 260
L+ L+ L H+ +EL + + AK D+A +N L E+ V + E+
Sbjct: 235 NGLKEELLQLRTTHQEQIKELMCQIEASAKEDEAGVNNLNQLRENLVTQCKASEMYVQEK 294
Query: 261 CNCKLAALRAERDVT-KGAFFP-VLNLGNKHVAGDRVRDEQRDLRDMESVHKELMDQASH 318
C C+L L+ + K FP VL + V ++V+ + L+++ES H L D+ ++
Sbjct: 295 CECELENLKNAPNANHKNQAFPLVLQEDAEQVVNEKVKHLENTLKELESQHSILKDEVTY 354
>gi|406830728|ref|ZP_11090322.1| forkhead-associated protein [Schlesneria paludicola DSM 18645]
Length = 1306
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 27/171 (15%)
Query: 393 ELNMKIDLVDVFRRSSAVTDSKIADLGIEIQKQIDEKNRIEMRLEEASREPGRKEIIAEF 452
EL++ +D R+ D ++A L EI++ ++ +EM+LE RE R+ EF
Sbjct: 549 ELDLHRQSLDEHLRAKRTADEQLAQLQAEIERVRQSRSDLEMKLEAERRELQRERNGYEF 608
Query: 453 -RALVSSFPEDMSA------------------MQRQLSKYKEAALDIHILRADVLSLTNV 493
RA V ++ +QR+ + Y D+ L+AD+ N+
Sbjct: 609 ERADVGGLQAELDRLRQRKIVLESELESERRDLQRERNAYDFERADVEQLQADL----NL 664
Query: 494 LERKVKECETLL---ASSADQV-AEIHKLQAMVQDLTDSNLELKLILDMYR 540
++ E E + A D V +E+H+LQA V++L S+ L+L LD R
Sbjct: 665 ARAQLVEHERIFLGHAQGKDSVDSEVHRLQAEVEELRQSDNALRLQLDAER 715
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.128 0.346
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,421,799,575
Number of Sequences: 23463169
Number of extensions: 280967396
Number of successful extensions: 1039367
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 230
Number of HSP's successfully gapped in prelim test: 15755
Number of HSP's that attempted gapping in prelim test: 984524
Number of HSP's gapped (non-prelim): 55128
length of query: 557
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 409
effective length of database: 8,886,646,355
effective search space: 3634638359195
effective search space used: 3634638359195
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 80 (35.4 bits)