Query 008675
Match_columns 557
No_of_seqs 266 out of 1799
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 09:06:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008675.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008675hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fim_B ARYL-alcohol oxidase; A 100.0 3.5E-81 1.2E-85 668.0 32.4 490 32-549 2-565 (566)
2 1ju2_A HydroxynitrIle lyase; f 100.0 2.8E-80 9.4E-85 662.4 35.1 501 14-554 8-521 (536)
3 3qvp_A Glucose oxidase; oxidor 100.0 5.1E-80 1.8E-84 659.7 34.3 485 28-554 15-582 (583)
4 3q9t_A Choline dehydrogenase a 100.0 1.2E-76 4.2E-81 634.4 32.3 484 30-549 4-572 (577)
5 3t37_A Probable dehydrogenase; 100.0 3.4E-74 1.2E-78 618.6 33.3 464 28-547 13-521 (526)
6 1gpe_A Protein (glucose oxidas 100.0 3E-74 1E-78 621.2 32.1 495 30-551 22-584 (587)
7 2jbv_A Choline oxidase; alcoho 100.0 1.9E-71 6.4E-76 595.4 35.5 468 31-550 12-530 (546)
8 1kdg_A CDH, cellobiose dehydro 100.0 1.5E-62 5.1E-67 529.0 24.7 467 29-549 4-542 (546)
9 1n4w_A CHOD, cholesterol oxida 100.0 1.2E-61 4.2E-66 515.6 27.7 440 31-551 4-501 (504)
10 1coy_A Cholesterol oxidase; ox 100.0 4.2E-61 1.4E-65 511.4 27.2 437 27-552 6-507 (507)
11 3pl8_A Pyranose 2-oxidase; sub 100.0 3.3E-47 1.1E-51 412.3 30.3 470 28-554 42-617 (623)
12 4at0_A 3-ketosteroid-delta4-5a 99.5 1E-13 3.4E-18 147.4 15.9 62 203-274 208-271 (510)
13 1qo8_A Flavocytochrome C3 fuma 99.4 1.4E-12 5E-17 140.2 12.1 62 203-273 256-317 (566)
14 1y0p_A Fumarate reductase flav 99.4 3.2E-12 1.1E-16 137.7 13.4 60 203-271 261-320 (571)
15 1d4d_A Flavocytochrome C fumar 99.2 6.1E-11 2.1E-15 127.5 15.4 63 203-274 261-324 (572)
16 2bs2_A Quinol-fumarate reducta 99.2 6E-11 2E-15 128.8 15.1 56 204-269 165-221 (660)
17 2h88_A Succinate dehydrogenase 99.2 8.5E-11 2.9E-15 126.7 16.1 57 203-269 161-218 (621)
18 3dme_A Conserved exported prot 99.2 1.5E-11 5.2E-16 124.7 8.9 61 203-276 156-216 (369)
19 2wdq_A Succinate dehydrogenase 99.2 1.6E-10 5.4E-15 124.4 14.6 58 203-269 149-207 (588)
20 3da1_A Glycerol-3-phosphate de 99.2 1E-10 3.6E-15 125.2 13.0 63 204-277 177-240 (561)
21 1chu_A Protein (L-aspartate ox 99.2 9.8E-11 3.4E-15 124.8 12.4 37 30-66 6-42 (540)
22 1kf6_A Fumarate reductase flav 99.1 5E-10 1.7E-14 120.7 14.5 58 203-270 140-199 (602)
23 2i0z_A NAD(FAD)-utilizing dehy 99.1 5.4E-10 1.9E-14 116.5 13.0 55 203-271 140-194 (447)
24 3v76_A Flavoprotein; structura 99.1 1.7E-10 5.7E-15 118.8 8.9 38 29-66 24-62 (417)
25 2rgh_A Alpha-glycerophosphate 99.1 1.6E-09 5.4E-14 116.3 16.7 63 204-277 195-258 (571)
26 3nyc_A D-arginine dehydrogenas 99.1 2.3E-10 7.9E-15 116.5 9.1 37 30-66 7-43 (381)
27 1y56_B Sarcosine oxidase; dehy 99.1 4E-10 1.4E-14 115.0 10.6 35 30-64 3-38 (382)
28 3dje_A Fructosyl amine: oxygen 99.0 4.3E-10 1.5E-14 117.1 10.1 38 29-66 3-42 (438)
29 1jnr_A Adenylylsulfate reducta 99.0 1.4E-09 4.7E-14 118.4 13.9 57 206-269 160-219 (643)
30 3gyx_A Adenylylsulfate reducta 99.0 4.4E-10 1.5E-14 121.9 9.3 51 211-268 182-233 (662)
31 2qcu_A Aerobic glycerol-3-phos 99.0 4.3E-09 1.5E-13 111.4 16.1 59 204-274 156-215 (501)
32 2oln_A NIKD protein; flavoprot 99.0 3.9E-09 1.3E-13 108.2 14.5 36 31-66 3-39 (397)
33 2gqf_A Hypothetical protein HI 99.0 6E-10 2E-14 114.2 8.0 37 30-66 2-39 (401)
34 2gag_B Heterotetrameric sarcos 99.0 3.7E-09 1.3E-13 108.6 13.6 36 30-65 19-57 (405)
35 3ps9_A TRNA 5-methylaminomethy 99.0 3E-09 1E-13 116.8 12.7 35 31-65 271-306 (676)
36 3pvc_A TRNA 5-methylaminomethy 98.9 2.1E-09 7.3E-14 118.2 10.7 37 30-66 262-299 (689)
37 1ryi_A Glycine oxidase; flavop 98.9 7.4E-10 2.5E-14 112.9 6.6 42 24-65 9-51 (382)
38 1pj5_A N,N-dimethylglycine oxi 98.9 3.3E-09 1.1E-13 119.3 12.1 59 203-277 157-215 (830)
39 2e5v_A L-aspartate oxidase; ar 98.9 3.9E-09 1.3E-13 110.7 11.7 30 34-63 1-31 (472)
40 3oz2_A Digeranylgeranylglycero 98.9 7.1E-09 2.4E-13 105.8 12.2 37 30-66 2-39 (397)
41 3cgv_A Geranylgeranyl reductas 98.9 1E-08 3.6E-13 104.8 11.9 36 31-66 3-39 (397)
42 3axb_A Putative oxidoreductase 98.8 1.4E-08 4.9E-13 105.8 12.2 34 30-63 21-56 (448)
43 2gf3_A MSOX, monomeric sarcosi 98.8 2.6E-08 8.8E-13 101.7 13.5 35 32-66 3-38 (389)
44 1rp0_A ARA6, thiazole biosynth 98.8 2.4E-08 8.3E-13 97.3 12.6 36 31-66 38-75 (284)
45 4dgk_A Phytoene dehydrogenase; 98.8 2.7E-09 9.3E-14 113.0 4.5 59 203-275 227-285 (501)
46 3ka7_A Oxidoreductase; structu 98.8 1.8E-08 6.1E-13 104.2 10.5 57 203-274 202-258 (425)
47 3e1t_A Halogenase; flavoprotei 98.8 3.6E-08 1.2E-12 104.5 13.1 54 205-268 119-172 (512)
48 3atr_A Conserved archaeal prot 98.8 1.3E-08 4.5E-13 106.2 9.1 55 204-268 107-162 (453)
49 2uzz_A N-methyl-L-tryptophan o 98.7 4.5E-08 1.5E-12 99.2 12.4 35 32-66 2-37 (372)
50 3nlc_A Uncharacterized protein 98.7 1.2E-08 4.1E-13 108.0 8.3 37 30-66 105-142 (549)
51 3jsk_A Cypbp37 protein; octame 98.7 6.3E-08 2.1E-12 95.7 11.9 35 31-65 78-115 (344)
52 3p1w_A Rabgdi protein; GDI RAB 98.7 6.4E-08 2.2E-12 100.3 12.2 41 28-68 16-57 (475)
53 3nix_A Flavoprotein/dehydrogen 98.7 6.8E-08 2.3E-12 99.7 12.3 35 31-65 4-39 (421)
54 3i3l_A Alkylhalidase CMLS; fla 98.7 5.2E-08 1.8E-12 104.6 10.8 39 28-66 19-58 (591)
55 3nrn_A Uncharacterized protein 98.6 1E-07 3.5E-12 98.4 8.9 36 33-68 1-37 (421)
56 4a9w_A Monooxygenase; baeyer-v 98.5 1.9E-07 6.4E-12 93.8 9.7 35 31-65 2-37 (357)
57 3f8d_A Thioredoxin reductase ( 98.5 2.2E-06 7.4E-11 84.6 17.1 61 206-277 199-260 (323)
58 2gjc_A Thiazole biosynthetic e 98.5 6.4E-07 2.2E-11 88.0 12.4 36 31-66 64-102 (326)
59 2gmh_A Electron transfer flavo 98.5 2.3E-07 7.8E-12 99.7 9.5 56 205-269 152-218 (584)
60 2zxi_A TRNA uridine 5-carboxym 98.5 3.1E-07 1.1E-11 97.7 10.1 34 31-64 26-60 (637)
61 3qj4_A Renalase; FAD/NAD(P)-bi 98.5 4E-07 1.4E-11 91.1 10.3 33 33-65 2-38 (342)
62 2qa1_A PGAE, polyketide oxygen 98.5 9.7E-07 3.3E-11 93.1 13.2 41 26-66 5-46 (500)
63 3ces_A MNMG, tRNA uridine 5-ca 98.5 4.1E-07 1.4E-11 97.2 9.9 34 31-64 27-61 (651)
64 3ihg_A RDME; flavoenzyme, anth 98.5 1.6E-06 5.4E-11 92.4 14.6 36 31-66 4-40 (535)
65 3c4n_A Uncharacterized protein 98.4 1.6E-07 5.6E-12 96.4 6.3 36 31-66 35-73 (405)
66 1yvv_A Amine oxidase, flavin-c 98.4 3.9E-07 1.3E-11 90.8 8.5 35 32-66 2-37 (336)
67 3fmw_A Oxygenase; mithramycin, 98.4 3.2E-07 1.1E-11 98.2 7.3 36 31-66 48-84 (570)
68 2qa2_A CABE, polyketide oxygen 98.4 1.5E-06 5.3E-11 91.5 12.4 39 28-66 8-47 (499)
69 3itj_A Thioredoxin reductase 1 98.4 4.3E-07 1.5E-11 90.4 7.0 56 208-273 220-276 (338)
70 3cp8_A TRNA uridine 5-carboxym 98.3 1.4E-06 4.9E-11 93.0 10.7 37 28-64 17-54 (641)
71 3kkj_A Amine oxidase, flavin-c 98.3 2.2E-07 7.4E-12 89.3 3.7 35 32-66 2-37 (336)
72 3lxd_A FAD-dependent pyridine 98.3 1.5E-06 5.2E-11 89.4 10.2 59 205-277 202-260 (415)
73 2x3n_A Probable FAD-dependent 98.3 1.6E-06 5.3E-11 88.8 10.1 35 31-65 5-40 (399)
74 2bry_A NEDD9 interacting prote 98.3 4.3E-07 1.5E-11 95.7 5.8 37 29-65 89-126 (497)
75 2vou_A 2,6-dihydroxypyridine h 98.3 5E-06 1.7E-10 84.9 13.5 35 31-65 4-39 (397)
76 3s5w_A L-ornithine 5-monooxyge 98.3 3.5E-06 1.2E-10 88.0 11.3 36 31-66 29-70 (463)
77 2gv8_A Monooxygenase; FMO, FAD 98.3 6.2E-06 2.1E-10 85.7 13.0 37 30-66 4-43 (447)
78 4fk1_A Putative thioredoxin re 98.2 4.3E-07 1.5E-11 89.3 3.6 37 28-64 2-39 (304)
79 2zbw_A Thioredoxin reductase; 98.2 3.1E-06 1E-10 84.2 9.6 36 30-65 3-39 (335)
80 4ap3_A Steroid monooxygenase; 98.2 1.9E-06 6.6E-11 91.7 8.4 37 30-66 19-56 (549)
81 3gwf_A Cyclohexanone monooxyge 98.2 1.8E-06 6.2E-11 91.7 7.7 36 31-66 7-44 (540)
82 3fg2_P Putative rubredoxin red 98.2 7.4E-06 2.5E-10 83.9 11.8 59 205-277 192-250 (404)
83 3d1c_A Flavin-containing putat 98.2 4.6E-06 1.6E-10 84.1 9.9 34 31-64 3-38 (369)
84 1w4x_A Phenylacetone monooxyge 98.2 2.8E-06 9.7E-11 90.5 8.4 37 30-66 14-51 (542)
85 3r9u_A Thioredoxin reductase; 98.1 1.2E-05 4E-10 79.0 11.8 58 207-274 193-250 (315)
86 2r0c_A REBC; flavin adenine di 98.1 1.1E-05 3.8E-10 86.0 12.4 35 31-65 25-60 (549)
87 4gcm_A TRXR, thioredoxin reduc 98.1 1.1E-06 3.6E-11 86.8 3.7 34 31-64 5-39 (312)
88 3lzw_A Ferredoxin--NADP reduct 98.1 4.5E-06 1.5E-10 82.7 8.3 34 32-65 7-41 (332)
89 3uox_A Otemo; baeyer-villiger 98.1 2.9E-06 1E-10 90.2 7.2 37 30-66 7-44 (545)
90 4a5l_A Thioredoxin reductase; 98.1 9.2E-07 3.1E-11 87.2 2.9 36 29-64 1-37 (314)
91 2xve_A Flavin-containing monoo 98.1 1.4E-05 4.7E-10 83.5 11.3 34 33-66 3-43 (464)
92 3fpz_A Thiazole biosynthetic e 98.0 2.1E-06 7.2E-11 85.2 3.6 37 31-67 64-103 (326)
93 2bcg_G Secretory pathway GDP d 98.0 2.6E-06 9E-11 88.7 4.2 42 28-69 7-49 (453)
94 4gde_A UDP-galactopyranose mut 98.0 2.2E-06 7.6E-11 90.7 3.3 39 30-68 8-48 (513)
95 3rp8_A Flavoprotein monooxygen 97.9 4.2E-06 1.4E-10 85.8 4.0 42 25-66 16-58 (407)
96 1c0p_A D-amino acid oxidase; a 97.9 5E-06 1.7E-10 83.8 4.2 37 29-65 3-40 (363)
97 2cul_A Glucose-inhibited divis 97.9 6.1E-06 2.1E-10 77.6 3.7 34 31-64 2-36 (232)
98 3k7m_X 6-hydroxy-L-nicotine ox 97.8 6.4E-06 2.2E-10 85.1 3.1 35 33-67 2-37 (431)
99 2xdo_A TETX2 protein; tetracyc 97.8 1.2E-05 4.2E-10 82.1 4.8 39 28-66 22-61 (398)
100 3c96_A Flavin-containing monoo 97.8 9.6E-06 3.3E-10 83.2 3.7 38 29-66 1-40 (410)
101 3qfa_A Thioredoxin reductase 1 97.8 1.1E-05 3.6E-10 85.6 3.7 46 19-64 19-65 (519)
102 4b63_A L-ornithine N5 monooxyg 97.8 3.4E-05 1.2E-09 81.2 7.4 62 200-266 147-212 (501)
103 3ef6_A Toluene 1,2-dioxygenase 97.7 4E-05 1.4E-09 78.6 7.6 57 206-277 194-250 (410)
104 1v0j_A UDP-galactopyranose mut 97.7 1.4E-05 4.7E-10 81.7 4.1 40 29-68 4-45 (399)
105 3hdq_A UDP-galactopyranose mut 97.7 1.4E-05 4.9E-10 81.0 3.9 40 28-67 25-65 (397)
106 3cty_A Thioredoxin reductase; 97.7 1.3E-05 4.5E-10 79.0 3.2 36 28-63 12-48 (319)
107 3alj_A 2-methyl-3-hydroxypyrid 97.7 1.6E-05 5.6E-10 80.5 3.8 37 30-66 9-46 (379)
108 3lad_A Dihydrolipoamide dehydr 97.7 1.7E-05 5.8E-10 83.1 3.9 34 31-64 2-36 (476)
109 1i8t_A UDP-galactopyranose mut 97.7 1.7E-05 6E-10 79.9 3.7 36 32-67 1-37 (367)
110 3urh_A Dihydrolipoyl dehydroge 97.7 1.7E-05 5.9E-10 83.4 3.7 39 28-66 21-60 (491)
111 1s3e_A Amine oxidase [flavin-c 97.7 1.6E-05 5.6E-10 84.2 3.6 39 30-68 2-41 (520)
112 3o0h_A Glutathione reductase; 97.7 1.7E-05 5.7E-10 83.3 3.4 34 31-64 25-59 (484)
113 1d5t_A Guanine nucleotide diss 97.7 2.4E-05 8.3E-10 80.8 4.4 41 29-69 3-44 (433)
114 3l8k_A Dihydrolipoyl dehydroge 97.6 1.6E-05 5.4E-10 83.1 2.8 37 30-66 2-39 (466)
115 1k0i_A P-hydroxybenzoate hydro 97.6 2.2E-05 7.5E-10 80.0 3.5 34 32-65 2-36 (394)
116 4dna_A Probable glutathione re 97.6 2.5E-05 8.7E-10 81.4 4.0 34 31-64 4-38 (463)
117 2ivd_A PPO, PPOX, protoporphyr 97.6 2.5E-05 8.4E-10 81.8 3.7 41 28-68 12-53 (478)
118 3ab1_A Ferredoxin--NADP reduct 97.6 2.4E-05 8.3E-10 78.6 3.5 37 29-65 11-48 (360)
119 2b9w_A Putative aminooxidase; 97.6 3.2E-05 1.1E-09 79.6 4.4 39 30-68 4-44 (424)
120 4b1b_A TRXR, thioredoxin reduc 97.6 2.5E-05 8.6E-10 82.6 3.6 34 32-65 42-76 (542)
121 2jae_A L-amino acid oxidase; o 97.6 3.5E-05 1.2E-09 80.9 4.6 39 30-68 9-48 (489)
122 1rsg_A FMS1 protein; FAD bindi 97.6 2E-05 6.7E-10 83.5 2.5 38 31-68 7-46 (516)
123 3ihm_A Styrene monooxygenase A 97.6 2.4E-05 8.2E-10 80.8 3.0 33 32-64 22-55 (430)
124 3dgh_A TRXR-1, thioredoxin red 97.6 3E-05 1E-09 81.3 3.7 34 30-63 7-41 (483)
125 2q7v_A Thioredoxin reductase; 97.6 2.7E-05 9.3E-10 77.0 3.1 35 29-63 5-40 (325)
126 3i6d_A Protoporphyrinogen oxid 97.6 2.4E-05 8.1E-10 81.6 2.8 36 32-67 5-47 (470)
127 3dk9_A Grase, GR, glutathione 97.6 2.4E-05 8.3E-10 82.0 2.8 36 29-64 17-53 (478)
128 2e1m_A L-glutamate oxidase; L- 97.6 4E-05 1.4E-09 77.0 4.2 39 29-67 41-81 (376)
129 2r9z_A Glutathione amide reduc 97.6 3.2E-05 1.1E-09 80.7 3.6 35 30-64 2-37 (463)
130 1sez_A Protoporphyrinogen oxid 97.5 4.2E-05 1.4E-09 80.7 4.3 40 29-68 10-50 (504)
131 2yg5_A Putrescine oxidase; oxi 97.5 2.6E-05 9E-10 81.0 2.7 38 31-68 4-42 (453)
132 1ges_A Glutathione reductase; 97.5 3.4E-05 1.1E-09 80.2 3.4 35 30-64 2-37 (450)
133 2ywl_A Thioredoxin reductase r 97.5 3.9E-05 1.3E-09 68.8 3.3 32 33-64 2-34 (180)
134 1zk7_A HGII, reductase, mercur 97.5 4.4E-05 1.5E-09 79.7 4.1 36 29-64 1-37 (467)
135 3ic9_A Dihydrolipoamide dehydr 97.5 4.3E-05 1.5E-09 80.3 3.7 33 32-64 8-41 (492)
136 3g3e_A D-amino-acid oxidase; F 97.5 3.5E-05 1.2E-09 77.1 2.9 32 34-65 2-40 (351)
137 2vvm_A Monoamine oxidase N; FA 97.5 3.7E-05 1.3E-09 80.9 3.1 38 31-68 38-76 (495)
138 3nks_A Protoporphyrinogen oxid 97.5 4.5E-05 1.6E-09 79.7 3.8 35 33-67 3-40 (477)
139 3fbs_A Oxidoreductase; structu 97.5 4.4E-05 1.5E-09 74.1 3.4 33 32-64 2-35 (297)
140 2hqm_A GR, grase, glutathione 97.5 3.9E-05 1.3E-09 80.4 3.2 35 30-64 9-44 (479)
141 3lov_A Protoporphyrinogen oxid 97.5 5E-05 1.7E-09 79.4 3.9 37 31-67 3-42 (475)
142 1mo9_A ORF3; nucleotide bindin 97.5 6.1E-05 2.1E-09 79.8 4.4 63 205-277 263-326 (523)
143 2bi7_A UDP-galactopyranose mut 97.5 6.6E-05 2.2E-09 76.2 4.3 36 32-67 3-39 (384)
144 3dgz_A Thioredoxin reductase 2 97.5 4.1E-05 1.4E-09 80.4 2.9 34 30-63 4-38 (488)
145 1ojt_A Surface protein; redox- 97.4 4.2E-05 1.4E-09 80.2 2.8 37 29-65 3-40 (482)
146 1v59_A Dihydrolipoamide dehydr 97.4 3.6E-05 1.2E-09 80.6 2.1 36 30-65 3-39 (478)
147 1trb_A Thioredoxin reductase; 97.4 4.1E-05 1.4E-09 75.4 2.1 34 30-63 3-37 (320)
148 3g5s_A Methylenetetrahydrofola 97.4 0.00013 4.4E-09 72.6 5.5 34 33-66 2-36 (443)
149 1dxl_A Dihydrolipoamide dehydr 97.4 8.2E-05 2.8E-09 77.7 4.0 37 30-66 4-41 (470)
150 2qae_A Lipoamide, dihydrolipoy 97.4 7.4E-05 2.5E-09 78.0 3.5 35 32-66 2-37 (468)
151 2a8x_A Dihydrolipoyl dehydroge 97.4 5.5E-05 1.9E-09 78.9 2.5 32 32-63 3-35 (464)
152 3klj_A NAD(FAD)-dependent dehy 97.4 0.00039 1.3E-08 70.5 8.6 37 29-65 6-43 (385)
153 1onf_A GR, grase, glutathione 97.4 8.5E-05 2.9E-09 78.2 3.7 33 32-64 2-35 (500)
154 2yqu_A 2-oxoglutarate dehydrog 97.3 7.8E-05 2.7E-09 77.5 3.4 34 32-65 1-35 (455)
155 2q0l_A TRXR, thioredoxin reduc 97.3 7.2E-05 2.5E-09 73.3 2.9 31 33-63 2-34 (311)
156 4dsg_A UDP-galactopyranose mut 97.3 9.9E-05 3.4E-09 77.3 4.0 38 30-67 7-46 (484)
157 2eq6_A Pyruvate dehydrogenase 97.3 7.3E-05 2.5E-09 77.9 2.8 33 32-64 6-39 (464)
158 2a87_A TRXR, TR, thioredoxin r 97.3 6.9E-05 2.4E-09 74.4 2.5 35 29-63 11-46 (335)
159 1fl2_A Alkyl hydroperoxide red 97.3 9.1E-05 3.1E-09 72.5 3.3 31 32-62 1-32 (310)
160 2iid_A L-amino-acid oxidase; f 97.3 0.00011 3.8E-09 77.3 4.2 40 29-68 30-70 (498)
161 1lvl_A Dihydrolipoamide dehydr 97.3 8.6E-05 2.9E-09 77.3 3.3 34 31-64 4-38 (458)
162 2dkh_A 3-hydroxybenzoate hydro 97.3 0.00012 4.1E-09 79.5 4.3 37 30-66 30-68 (639)
163 1zmd_A Dihydrolipoyl dehydroge 97.3 8.9E-05 3E-09 77.5 3.0 36 31-66 5-41 (474)
164 2aqj_A Tryptophan halogenase, 97.3 0.00012 4.2E-09 77.7 4.0 36 31-66 4-43 (538)
165 1ebd_A E3BD, dihydrolipoamide 97.3 9.4E-05 3.2E-09 76.9 3.0 32 32-63 3-35 (455)
166 4hb9_A Similarities with proba 97.2 0.00015 5.1E-09 73.9 3.6 33 34-66 3-36 (412)
167 1vg0_A RAB proteins geranylger 97.2 0.00017 5.9E-09 77.0 3.9 42 29-70 5-47 (650)
168 1vdc_A NTR, NADPH dependent th 97.2 0.00011 3.8E-09 72.7 2.3 32 31-62 7-39 (333)
169 2e4g_A Tryptophan halogenase; 97.2 0.00022 7.6E-09 75.9 4.6 36 31-66 24-63 (550)
170 3k30_A Histamine dehydrogenase 97.2 0.00022 7.6E-09 78.1 4.6 39 29-67 388-427 (690)
171 4gut_A Lysine-specific histone 97.2 0.0002 6.9E-09 78.9 4.2 38 30-67 334-372 (776)
172 2vdc_G Glutamate synthase [NAD 97.1 0.00027 9.4E-09 73.2 4.8 37 30-66 120-157 (456)
173 2wpf_A Trypanothione reductase 97.1 0.00017 5.8E-09 75.8 3.2 34 29-62 4-39 (495)
174 1b37_A Protein (polyamine oxid 97.1 0.00018 6.1E-09 75.1 3.4 38 31-68 3-42 (472)
175 2v3a_A Rubredoxin reductase; a 97.1 0.00022 7.6E-09 72.2 4.0 35 30-64 2-39 (384)
176 1q1r_A Putidaredoxin reductase 97.1 0.00024 8.3E-09 73.2 3.9 59 205-277 199-259 (431)
177 3c4a_A Probable tryptophan hyd 97.1 0.00024 8E-09 72.0 3.7 34 33-66 1-37 (381)
178 1fec_A Trypanothione reductase 97.1 0.00026 9.1E-09 74.2 4.0 31 31-61 2-34 (490)
179 2x8g_A Thioredoxin glutathione 97.1 0.00022 7.4E-09 76.9 3.2 34 30-63 105-139 (598)
180 2weu_A Tryptophan 5-halogenase 97.0 0.00019 6.4E-09 75.8 2.5 34 32-65 2-39 (511)
181 2pyx_A Tryptophan halogenase; 97.0 0.00027 9.3E-09 74.8 3.6 35 31-65 6-53 (526)
182 1hyu_A AHPF, alkyl hydroperoxi 97.0 0.0003 1E-08 74.3 3.3 34 29-62 209-243 (521)
183 2z3y_A Lysine-specific histone 97.0 0.00051 1.7E-08 74.8 5.0 40 29-68 104-144 (662)
184 1xdi_A RV3303C-LPDA; reductase 96.9 0.00037 1.3E-08 73.3 3.2 33 32-64 2-38 (499)
185 1xhc_A NADH oxidase /nitrite r 96.9 0.00044 1.5E-08 69.6 3.6 33 33-66 9-42 (367)
186 2bc0_A NADH oxidase; flavoprot 96.9 0.00054 1.8E-08 71.8 4.2 34 32-65 35-72 (490)
187 1pn0_A Phenol 2-monooxygenase; 96.9 0.00039 1.3E-08 75.7 3.1 34 32-65 8-47 (665)
188 1ps9_A 2,4-dienoyl-COA reducta 96.9 0.00071 2.4E-08 73.9 5.1 38 30-67 371-409 (671)
189 3kd9_A Coenzyme A disulfide re 96.9 0.00054 1.9E-08 71.0 4.0 35 32-66 3-40 (449)
190 2gqw_A Ferredoxin reductase; f 96.8 0.00059 2E-08 69.7 3.9 36 31-66 6-44 (408)
191 2cdu_A NADPH oxidase; flavoenz 96.8 0.00055 1.9E-08 71.0 3.6 33 33-65 1-36 (452)
192 1o94_A Tmadh, trimethylamine d 96.8 0.00075 2.6E-08 74.3 4.6 37 30-66 387-424 (729)
193 3iwa_A FAD-dependent pyridine 96.8 0.00061 2.1E-08 71.0 3.7 58 205-277 210-267 (472)
194 2xag_A Lysine-specific histone 96.8 0.00097 3.3E-08 74.1 5.4 39 30-68 276-315 (852)
195 1m6i_A Programmed cell death p 96.8 0.00058 2E-08 71.6 3.5 58 205-277 234-291 (493)
196 3oc4_A Oxidoreductase, pyridin 96.7 0.00082 2.8E-08 69.7 3.8 35 33-67 3-40 (452)
197 3cgb_A Pyridine nucleotide-dis 96.6 0.001 3.4E-08 69.6 3.7 35 32-66 36-73 (480)
198 2gag_A Heterotetrameric sarcos 96.6 0.00083 2.8E-08 76.3 3.3 61 207-277 326-392 (965)
199 1nhp_A NADH peroxidase; oxidor 96.6 0.001 3.4E-08 68.9 3.6 34 33-66 1-37 (447)
200 1lqt_A FPRA; NADP+ derivative, 96.6 0.0011 3.8E-08 68.6 3.8 36 31-66 2-45 (456)
201 1cjc_A Protein (adrenodoxin re 96.6 0.0012 3.9E-08 68.6 3.8 36 31-66 5-43 (460)
202 3ics_A Coenzyme A-disulfide re 96.6 0.0012 4.1E-08 70.9 4.0 37 30-66 34-73 (588)
203 3ab1_A Ferredoxin--NADP reduct 96.5 0.018 6.1E-07 57.3 12.3 58 210-277 215-272 (360)
204 2v3a_A Rubredoxin reductase; a 96.5 0.016 5.5E-07 58.4 11.5 34 32-65 145-179 (384)
205 1mo9_A ORF3; nucleotide bindin 96.4 0.019 6.6E-07 60.4 12.3 33 33-65 215-248 (523)
206 3sx6_A Sulfide-quinone reducta 96.4 0.0018 6.2E-08 66.7 4.1 35 32-66 4-42 (437)
207 3h28_A Sulfide-quinone reducta 96.4 0.0015 5.2E-08 67.2 3.5 34 33-66 3-39 (430)
208 1gte_A Dihydropyrimidine dehyd 96.4 0.0017 5.7E-08 74.3 4.0 36 31-66 186-223 (1025)
209 3cty_A Thioredoxin reductase; 96.3 0.0091 3.1E-07 58.3 8.5 58 210-277 203-261 (319)
210 1fl2_A Alkyl hydroperoxide red 96.3 0.014 4.9E-07 56.6 9.8 54 210-273 193-247 (310)
211 1y56_A Hypothetical protein PH 96.3 0.0014 4.8E-08 68.7 2.5 36 31-66 107-142 (493)
212 3h8l_A NADH oxidase; membrane 96.2 0.0019 6.4E-08 65.9 3.2 33 33-65 2-38 (409)
213 1trb_A Thioredoxin reductase; 96.2 0.024 8.1E-07 55.3 11.0 55 209-273 196-252 (320)
214 2eq6_A Pyruvate dehydrogenase 96.0 0.029 9.8E-07 58.1 11.0 33 33-65 170-203 (464)
215 3ntd_A FAD-dependent pyridine 96.0 0.0031 1.1E-07 67.3 3.5 34 33-66 2-38 (565)
216 3ayj_A Pro-enzyme of L-phenyla 96.0 0.0022 7.5E-08 69.5 2.2 35 32-66 56-100 (721)
217 4eqs_A Coenzyme A disulfide re 96.0 0.0037 1.3E-07 64.3 3.9 33 34-66 2-37 (437)
218 2yqu_A 2-oxoglutarate dehydrog 95.9 0.025 8.5E-07 58.4 9.9 33 33-65 168-201 (455)
219 2q0l_A TRXR, thioredoxin reduc 95.9 0.046 1.6E-06 52.9 11.3 57 210-276 192-249 (311)
220 3vrd_B FCCB subunit, flavocyto 95.9 0.0041 1.4E-07 63.1 3.5 31 35-65 5-38 (401)
221 1q1r_A Putidaredoxin reductase 95.8 0.032 1.1E-06 57.1 10.2 33 33-65 150-183 (431)
222 1hyu_A AHPF, alkyl hydroperoxi 95.8 0.033 1.1E-06 58.6 10.1 54 210-273 404-458 (521)
223 2qae_A Lipoamide, dihydrolipoy 95.7 0.05 1.7E-06 56.3 10.9 33 33-65 175-208 (468)
224 1v59_A Dihydrolipoamide dehydr 95.6 0.038 1.3E-06 57.4 9.9 33 33-65 184-217 (478)
225 2zbw_A Thioredoxin reductase; 95.6 0.071 2.4E-06 52.2 11.3 58 209-277 203-261 (335)
226 4g6h_A Rotenone-insensitive NA 95.6 0.0084 2.9E-07 62.8 4.6 36 30-65 40-76 (502)
227 3urh_A Dihydrolipoyl dehydroge 95.5 0.073 2.5E-06 55.5 11.7 33 33-65 199-232 (491)
228 3ic9_A Dihydrolipoamide dehydr 95.5 0.059 2E-06 56.2 10.6 33 33-65 175-208 (492)
229 2q7v_A Thioredoxin reductase; 95.4 0.068 2.3E-06 52.1 10.1 53 210-273 201-254 (325)
230 2r9z_A Glutathione amide reduc 95.3 0.096 3.3E-06 54.1 11.6 33 33-65 167-200 (463)
231 3hyw_A Sulfide-quinone reducta 95.2 0.0089 3E-07 61.3 3.3 56 206-277 209-264 (430)
232 2hqm_A GR, grase, glutathione 95.2 0.033 1.1E-06 57.9 7.7 33 33-65 186-219 (479)
233 3lad_A Dihydrolipoamide dehydr 95.0 0.12 4.2E-06 53.4 11.4 33 33-65 181-214 (476)
234 3iwa_A FAD-dependent pyridine 94.9 0.16 5.4E-06 52.6 11.9 33 33-65 160-194 (472)
235 3s5w_A L-ornithine 5-monooxyge 94.9 0.099 3.4E-06 53.9 10.1 34 32-65 227-263 (463)
236 2a8x_A Dihydrolipoyl dehydroge 94.7 0.085 2.9E-06 54.5 9.2 33 33-65 172-205 (464)
237 3ntd_A FAD-dependent pyridine 94.5 0.18 6.1E-06 53.5 11.3 32 34-65 153-185 (565)
238 1xdi_A RV3303C-LPDA; reductase 94.5 0.071 2.4E-06 55.7 8.0 33 33-65 183-216 (499)
239 3dgh_A TRXR-1, thioredoxin red 94.3 0.15 5.2E-06 52.9 10.1 31 33-63 188-219 (483)
240 3lzw_A Ferredoxin--NADP reduct 94.2 0.12 4.2E-06 50.2 8.6 57 210-277 202-259 (332)
241 3dgz_A Thioredoxin reductase 2 94.2 0.17 6E-06 52.5 10.1 30 34-63 187-217 (488)
242 3dk9_A Grase, GR, glutathione 94.1 0.31 1.1E-05 50.4 12.0 33 33-65 188-221 (478)
243 3ics_A Coenzyme A-disulfide re 94.1 0.15 5.3E-06 54.3 9.6 33 33-65 188-221 (588)
244 3o0h_A Glutathione reductase; 93.9 0.14 5E-06 53.1 8.8 33 33-65 192-225 (484)
245 4dna_A Probable glutathione re 93.3 0.13 4.4E-06 53.1 7.2 34 32-65 170-204 (463)
246 4g6h_A Rotenone-insensitive NA 92.7 0.43 1.5E-05 49.7 10.1 32 34-65 219-265 (502)
247 1nhp_A NADH peroxidase; oxidor 92.5 0.071 2.4E-06 54.8 3.8 36 31-66 148-184 (447)
248 2gag_A Heterotetrameric sarcos 92.3 0.39 1.3E-05 54.4 9.7 32 33-64 285-317 (965)
249 1fec_A Trypanothione reductase 92.1 0.49 1.7E-05 49.1 9.6 33 33-65 188-224 (490)
250 4gcm_A TRXR, thioredoxin reduc 92.0 0.1 3.5E-06 50.5 4.1 33 34-66 147-180 (312)
251 2wpf_A Trypanothione reductase 92.0 0.56 1.9E-05 48.7 9.9 33 33-65 192-228 (495)
252 3fwz_A Inner membrane protein 91.5 0.15 5.3E-06 42.9 4.2 31 34-64 9-40 (140)
253 2g1u_A Hypothetical protein TM 91.5 0.11 3.9E-06 44.5 3.3 32 33-64 20-52 (155)
254 3llv_A Exopolyphosphatase-rela 91.5 0.11 3.8E-06 43.7 3.2 30 34-63 8-38 (141)
255 3klj_A NAD(FAD)-dependent dehy 91.4 0.11 3.7E-06 52.3 3.5 34 33-66 147-181 (385)
256 1lss_A TRK system potassium up 91.2 0.13 4.4E-06 42.9 3.3 30 34-63 6-36 (140)
257 1lvl_A Dihydrolipoamide dehydr 90.6 0.14 4.7E-06 52.8 3.5 34 33-66 172-206 (458)
258 1id1_A Putative potassium chan 90.4 0.2 6.8E-06 42.8 3.8 31 33-63 4-35 (153)
259 4a5l_A Thioredoxin reductase; 90.3 0.18 6.3E-06 48.6 4.0 33 33-65 153-186 (314)
260 1ebd_A E3BD, dihydrolipoamide 90.2 0.17 5.7E-06 52.1 3.7 34 32-65 170-204 (455)
261 1xhc_A NADH oxidase /nitrite r 90.0 0.15 5.2E-06 50.8 3.1 34 33-66 144-178 (367)
262 1ges_A Glutathione reductase; 88.6 0.25 8.4E-06 50.8 3.5 33 33-65 168-201 (450)
263 2gqw_A Ferredoxin reductase; f 88.2 0.29 9.9E-06 49.5 3.7 35 32-66 145-180 (408)
264 3ic5_A Putative saccharopine d 87.9 0.29 1E-05 39.2 2.9 30 34-63 7-38 (118)
265 2hmt_A YUAA protein; RCK, KTN, 87.7 0.26 8.9E-06 41.2 2.6 30 34-63 8-38 (144)
266 3cgb_A Pyridine nucleotide-dis 87.6 0.21 7.2E-06 51.8 2.3 34 32-65 186-220 (480)
267 2bc0_A NADH oxidase; flavoprot 87.4 0.34 1.2E-05 50.3 3.8 34 33-66 195-229 (490)
268 3d1c_A Flavin-containing putat 87.3 0.31 1E-05 48.2 3.2 33 34-66 168-201 (369)
269 2gv8_A Monooxygenase; FMO, FAD 86.8 0.38 1.3E-05 49.2 3.7 33 33-65 213-247 (447)
270 4eqs_A Coenzyme A disulfide re 86.6 0.42 1.5E-05 48.8 3.9 33 34-66 149-182 (437)
271 2xve_A Flavin-containing monoo 86.5 0.45 1.5E-05 49.0 4.1 33 33-65 198-231 (464)
272 1ojt_A Surface protein; redox- 86.2 0.41 1.4E-05 49.6 3.5 34 33-66 186-220 (482)
273 3gwf_A Cyclohexanone monooxyge 86.2 0.52 1.8E-05 49.6 4.4 33 33-65 179-212 (540)
274 3uox_A Otemo; baeyer-villiger 86.2 0.48 1.7E-05 49.9 4.1 34 33-66 186-220 (545)
275 1onf_A GR, grase, glutathione 86.1 0.47 1.6E-05 49.4 3.9 34 33-66 177-211 (500)
276 1zmd_A Dihydrolipoyl dehydroge 86.1 0.42 1.4E-05 49.3 3.6 34 33-66 179-213 (474)
277 3l4b_C TRKA K+ channel protien 86.0 0.33 1.1E-05 44.2 2.5 30 35-64 3-33 (218)
278 3kd9_A Coenzyme A disulfide re 85.7 0.48 1.6E-05 48.5 3.7 34 33-66 149-183 (449)
279 3hn2_A 2-dehydropantoate 2-red 85.6 0.5 1.7E-05 45.8 3.6 31 34-64 4-35 (312)
280 1f0y_A HCDH, L-3-hydroxyacyl-C 85.5 0.53 1.8E-05 45.4 3.7 31 34-64 17-48 (302)
281 1dxl_A Dihydrolipoamide dehydr 85.5 0.4 1.4E-05 49.4 3.0 34 33-66 178-212 (470)
282 2cdu_A NADPH oxidase; flavoenz 85.4 0.57 1.9E-05 48.0 4.2 34 33-66 150-184 (452)
283 1vdc_A NTR, NADPH dependent th 85.4 0.58 2E-05 45.4 4.0 57 209-273 207-264 (333)
284 3i83_A 2-dehydropantoate 2-red 85.2 0.49 1.7E-05 46.0 3.4 31 34-64 4-35 (320)
285 3ef6_A Toluene 1,2-dioxygenase 85.1 0.51 1.7E-05 47.7 3.5 34 33-66 144-178 (410)
286 2a87_A TRXR, TR, thioredoxin r 85.0 0.62 2.1E-05 45.4 4.0 33 33-65 156-189 (335)
287 2bcg_G Secretory pathway GDP d 84.8 0.82 2.8E-05 46.9 5.0 62 191-267 236-299 (453)
288 4ap3_A Steroid monooxygenase; 84.7 0.55 1.9E-05 49.5 3.7 34 33-66 192-226 (549)
289 3ado_A Lambda-crystallin; L-gu 84.2 0.52 1.8E-05 45.7 3.0 30 34-63 8-38 (319)
290 4g65_A TRK system potassium up 84.1 0.55 1.9E-05 48.3 3.3 31 34-64 5-36 (461)
291 1zk7_A HGII, reductase, mercur 84.0 0.62 2.1E-05 47.9 3.7 34 33-66 177-211 (467)
292 3oj0_A Glutr, glutamyl-tRNA re 83.0 0.77 2.6E-05 38.6 3.3 32 33-64 22-54 (144)
293 3itj_A Thioredoxin reductase 1 83.0 0.83 2.8E-05 44.3 4.0 35 32-66 173-208 (338)
294 3g17_A Similar to 2-dehydropan 82.6 0.57 2E-05 44.9 2.5 31 34-64 4-35 (294)
295 3l8k_A Dihydrolipoyl dehydroge 82.5 0.75 2.6E-05 47.3 3.6 34 33-66 173-207 (466)
296 3lxd_A FAD-dependent pyridine 82.4 0.82 2.8E-05 46.2 3.8 34 33-66 153-187 (415)
297 1vg0_A RAB proteins geranylger 82.3 1.9 6.4E-05 46.1 6.5 63 190-265 371-434 (650)
298 1kyq_A Met8P, siroheme biosynt 81.9 0.71 2.4E-05 43.6 2.9 31 33-63 14-45 (274)
299 3fg2_P Putative rubredoxin red 81.9 0.82 2.8E-05 46.0 3.6 34 33-66 143-177 (404)
300 3c85_A Putative glutathione-re 81.8 0.85 2.9E-05 40.1 3.2 32 33-64 40-73 (183)
301 3ghy_A Ketopantoate reductase 81.8 0.73 2.5E-05 45.1 3.0 30 34-63 5-35 (335)
302 2x8g_A Thioredoxin glutathione 81.7 0.74 2.5E-05 49.1 3.3 30 34-63 288-318 (598)
303 4e12_A Diketoreductase; oxidor 81.5 0.97 3.3E-05 43.0 3.7 31 34-64 6-37 (283)
304 1ks9_A KPA reductase;, 2-dehyd 81.5 0.88 3E-05 43.2 3.4 30 35-64 3-33 (291)
305 2raf_A Putative dinucleotide-b 81.4 0.95 3.3E-05 40.9 3.5 31 34-64 21-52 (209)
306 3dfz_A SIRC, precorrin-2 dehyd 81.1 0.99 3.4E-05 41.2 3.4 30 33-62 32-62 (223)
307 3fbs_A Oxidoreductase; structu 80.7 1.3 4.3E-05 42.0 4.2 33 32-65 141-174 (297)
308 3oc4_A Oxidoreductase, pyridin 80.5 1 3.5E-05 46.0 3.8 34 33-66 148-182 (452)
309 1jw9_B Molybdopterin biosynthe 80.5 0.96 3.3E-05 42.2 3.2 33 32-64 31-65 (249)
310 4b1b_A TRXR, thioredoxin reduc 80.0 1.1 3.7E-05 47.1 3.8 32 33-64 224-256 (542)
311 1d5t_A Guanine nucleotide diss 79.9 0.97 3.3E-05 46.0 3.3 62 191-267 228-289 (433)
312 3l9w_A Glutathione-regulated p 79.7 0.99 3.4E-05 45.6 3.2 31 34-64 6-37 (413)
313 2cul_A Glucose-inhibited divis 79.6 2.2 7.5E-05 39.0 5.4 49 206-269 77-126 (232)
314 3f8d_A Thioredoxin reductase ( 79.1 1.2 4.1E-05 42.7 3.6 35 32-66 154-189 (323)
315 2ew2_A 2-dehydropantoate 2-red 79.1 1.1 3.6E-05 43.2 3.2 30 34-63 5-35 (316)
316 1bg6_A N-(1-D-carboxylethyl)-L 79.1 1.1 3.7E-05 44.1 3.3 31 33-63 5-36 (359)
317 3hwr_A 2-dehydropantoate 2-red 79.1 1.1 3.7E-05 43.6 3.2 27 34-60 21-48 (318)
318 1lld_A L-lactate dehydrogenase 79.1 1.1 3.7E-05 43.5 3.2 31 34-64 9-42 (319)
319 3qfa_A Thioredoxin reductase 1 78.1 1.2 4E-05 46.6 3.3 30 34-63 212-242 (519)
320 2a9f_A Putative malic enzyme ( 77.8 1.3 4.4E-05 43.9 3.2 35 31-65 187-223 (398)
321 2ewd_A Lactate dehydrogenase,; 77.5 1.5 5.3E-05 42.4 3.8 32 33-64 5-38 (317)
322 2y0c_A BCEC, UDP-glucose dehyd 77.4 1.2 4.2E-05 45.9 3.2 31 33-63 9-40 (478)
323 1txg_A Glycerol-3-phosphate de 77.0 1.3 4.6E-05 43.0 3.2 28 35-62 3-31 (335)
324 3r9u_A Thioredoxin reductase; 76.6 1.7 5.8E-05 41.5 3.8 34 33-66 148-182 (315)
325 2aef_A Calcium-gated potassium 76.5 1.1 3.9E-05 41.1 2.4 31 33-64 10-41 (234)
326 1jay_A Coenzyme F420H2:NADP+ o 76.2 1.8 6.2E-05 38.9 3.7 29 35-63 3-33 (212)
327 2dpo_A L-gulonate 3-dehydrogen 75.9 1.4 4.9E-05 42.7 3.0 31 34-64 8-39 (319)
328 1zcj_A Peroxisomal bifunctiona 75.9 1.6 5.5E-05 44.8 3.5 31 34-64 39-70 (463)
329 1vl6_A Malate oxidoreductase; 75.8 1.6 5.4E-05 43.2 3.2 36 31-66 191-228 (388)
330 3k6j_A Protein F01G10.3, confi 75.8 2.1 7.3E-05 43.6 4.3 32 33-64 55-87 (460)
331 1mv8_A GMD, GDP-mannose 6-dehy 75.7 1.7 5.8E-05 44.3 3.6 29 35-63 3-32 (436)
332 4a9w_A Monooxygenase; baeyer-v 75.7 1.9 6.5E-05 41.9 3.9 31 33-64 164-195 (357)
333 1z82_A Glycerol-3-phosphate de 75.7 1.5 5.2E-05 42.8 3.2 32 32-63 14-46 (335)
334 3k96_A Glycerol-3-phosphate de 75.6 1.6 5.5E-05 43.0 3.3 31 33-63 30-61 (356)
335 3rui_A Ubiquitin-like modifier 75.5 2.3 7.7E-05 41.5 4.2 35 32-66 34-70 (340)
336 3ego_A Probable 2-dehydropanto 75.4 1.8 6.3E-05 41.6 3.7 31 34-64 4-34 (307)
337 1pzg_A LDH, lactate dehydrogen 74.8 1.7 5.7E-05 42.5 3.2 32 33-64 10-43 (331)
338 3gg2_A Sugar dehydrogenase, UD 73.9 1.7 5.9E-05 44.3 3.2 31 34-64 4-35 (450)
339 4dio_A NAD(P) transhydrogenase 73.8 1.8 6.2E-05 43.2 3.2 33 32-64 190-223 (405)
340 1cjc_A Protein (adrenodoxin re 73.7 2.1 7.2E-05 43.8 3.8 54 209-270 269-335 (460)
341 2vns_A Metalloreductase steap3 73.5 2 6.8E-05 38.9 3.2 30 34-63 30-60 (215)
342 3qha_A Putative oxidoreductase 73.1 3 0.0001 39.8 4.5 33 32-64 15-48 (296)
343 3dtt_A NADP oxidoreductase; st 73.1 2.1 7.3E-05 39.6 3.3 33 32-64 19-52 (245)
344 2v6b_A L-LDH, L-lactate dehydr 73.0 2 6.7E-05 41.4 3.2 29 35-63 3-34 (304)
345 1evy_A Glycerol-3-phosphate de 72.7 1.7 5.8E-05 43.0 2.7 30 34-63 17-47 (366)
346 3p2y_A Alanine dehydrogenase/p 72.5 2 6.9E-05 42.5 3.1 33 32-64 184-217 (381)
347 2hjr_A Malate dehydrogenase; m 72.1 2.1 7.3E-05 41.6 3.2 31 34-64 16-48 (328)
348 1nyt_A Shikimate 5-dehydrogena 72.0 2.2 7.4E-05 40.3 3.2 31 33-63 120-151 (271)
349 2vdc_G Glutamate synthase [NAD 71.8 2.2 7.4E-05 43.7 3.3 33 33-65 265-299 (456)
350 2ywl_A Thioredoxin reductase r 71.6 3.4 0.00012 35.8 4.1 54 205-277 64-117 (180)
351 1zud_1 Adenylyltransferase THI 71.4 2.8 9.5E-05 39.0 3.7 34 32-65 28-63 (251)
352 4dll_A 2-hydroxy-3-oxopropiona 71.3 3.1 0.0001 40.3 4.1 31 33-63 32-63 (320)
353 1o94_A Tmadh, trimethylamine d 71.1 2.3 7.7E-05 46.5 3.4 32 33-64 529-563 (729)
354 3pdu_A 3-hydroxyisobutyrate de 70.6 2.7 9.1E-05 39.9 3.4 31 34-64 3-34 (287)
355 2h78_A Hibadh, 3-hydroxyisobut 70.5 2.8 9.6E-05 40.1 3.6 30 34-63 5-35 (302)
356 1a5z_A L-lactate dehydrogenase 70.2 2.5 8.4E-05 41.0 3.2 29 35-63 3-34 (319)
357 2vvm_A Monoamine oxidase N; FA 69.9 5 0.00017 41.2 5.7 49 203-266 261-310 (495)
358 3g0o_A 3-hydroxyisobutyrate de 69.7 2.6 8.8E-05 40.4 3.2 31 33-63 8-39 (303)
359 2eez_A Alanine dehydrogenase; 69.6 2.7 9.2E-05 41.7 3.3 31 33-63 167-198 (369)
360 3ond_A Adenosylhomocysteinase; 69.6 2.5 8.7E-05 43.2 3.2 31 33-63 266-297 (488)
361 3pef_A 6-phosphogluconate dehy 69.5 2.6 9E-05 40.0 3.2 31 34-64 3-34 (287)
362 2pv7_A T-protein [includes: ch 69.5 2.9 9.9E-05 40.0 3.5 30 34-63 23-54 (298)
363 1t2d_A LDH-P, L-lactate dehydr 69.5 3.1 0.0001 40.4 3.6 31 33-63 5-37 (322)
364 3h8v_A Ubiquitin-like modifier 69.5 2.8 9.5E-05 40.0 3.2 35 31-65 35-71 (292)
365 3cky_A 2-hydroxymethyl glutara 69.4 3.3 0.00011 39.5 3.8 31 33-63 5-36 (301)
366 3doj_A AT3G25530, dehydrogenas 69.0 3.3 0.00011 39.8 3.8 32 33-64 22-54 (310)
367 1x13_A NAD(P) transhydrogenase 69.0 2.6 9.1E-05 42.2 3.2 32 33-64 173-205 (401)
368 3mog_A Probable 3-hydroxybutyr 69.0 2.5 8.4E-05 43.6 3.0 31 34-64 7-38 (483)
369 1w4x_A Phenylacetone monooxyge 68.9 3 0.0001 43.7 3.7 34 33-66 187-221 (542)
370 1yqg_A Pyrroline-5-carboxylate 68.9 2.8 9.6E-05 39.0 3.2 29 35-63 3-33 (263)
371 3lk7_A UDP-N-acetylmuramoylala 68.8 3.5 0.00012 42.1 4.1 31 34-64 11-42 (451)
372 1hyh_A L-hicdh, L-2-hydroxyiso 68.6 2.8 9.7E-05 40.3 3.2 30 34-63 3-35 (309)
373 1pjc_A Protein (L-alanine dehy 68.5 2.9 0.0001 41.2 3.3 31 33-63 168-199 (361)
374 1yj8_A Glycerol-3-phosphate de 68.2 2.5 8.5E-05 41.9 2.8 32 34-65 23-62 (375)
375 2f1k_A Prephenate dehydrogenas 68.1 2.9 0.0001 39.3 3.2 29 35-63 3-32 (279)
376 4ezb_A Uncharacterized conserv 68.1 3.3 0.00011 40.0 3.5 31 34-64 26-58 (317)
377 3vh1_A Ubiquitin-like modifier 67.9 4.4 0.00015 42.5 4.6 35 32-66 327-363 (598)
378 1vpd_A Tartronate semialdehyde 67.8 3.5 0.00012 39.3 3.6 30 34-63 7-37 (299)
379 3vtf_A UDP-glucose 6-dehydroge 67.7 3.4 0.00012 41.8 3.6 32 32-63 21-53 (444)
380 2egg_A AROE, shikimate 5-dehyd 67.7 3.4 0.00012 39.5 3.5 31 33-63 142-174 (297)
381 3phh_A Shikimate dehydrogenase 67.7 3.1 0.00011 39.1 3.2 33 32-64 118-151 (269)
382 2uyy_A N-PAC protein; long-cha 67.3 4 0.00014 39.2 4.0 31 33-63 31-62 (316)
383 3ojo_A CAP5O; rossmann fold, c 67.3 3 0.0001 42.2 3.1 31 34-64 13-44 (431)
384 3tl2_A Malate dehydrogenase; c 67.1 4.1 0.00014 39.3 4.0 31 33-63 9-41 (315)
385 4e21_A 6-phosphogluconate dehy 67.0 3.3 0.00011 40.8 3.3 35 29-63 19-54 (358)
386 1dlj_A UDP-glucose dehydrogena 67.0 3.5 0.00012 41.3 3.6 29 35-63 3-31 (402)
387 2vhw_A Alanine dehydrogenase; 66.7 3.3 0.00011 41.1 3.3 32 32-63 168-200 (377)
388 1x0v_A GPD-C, GPDH-C, glycerol 66.6 2.5 8.5E-05 41.5 2.4 32 34-65 10-49 (354)
389 1nvt_A Shikimate 5'-dehydrogen 66.5 3.6 0.00012 39.0 3.4 29 34-63 130-159 (287)
390 4a7p_A UDP-glucose dehydrogena 66.4 3.2 0.00011 42.2 3.2 33 33-65 9-42 (446)
391 2gf2_A Hibadh, 3-hydroxyisobut 66.3 4 0.00014 38.8 3.7 29 35-63 3-32 (296)
392 1l7d_A Nicotinamide nucleotide 66.2 3.3 0.00011 41.3 3.2 33 32-64 172-205 (384)
393 3d4o_A Dipicolinate synthase s 66.2 3.6 0.00012 39.2 3.3 32 33-64 156-188 (293)
394 3pid_A UDP-glucose 6-dehydroge 66.1 3.7 0.00013 41.5 3.5 32 33-64 37-68 (432)
395 1k0i_A P-hydroxybenzoate hydro 66.0 5.2 0.00018 39.7 4.6 56 203-269 109-164 (394)
396 3ius_A Uncharacterized conserv 65.9 4.2 0.00014 38.2 3.8 31 34-64 7-38 (286)
397 2zyd_A 6-phosphogluconate dehy 65.9 3.8 0.00013 42.2 3.6 32 32-63 15-47 (480)
398 4gsl_A Ubiquitin-like modifier 65.9 3.5 0.00012 43.4 3.3 35 32-66 326-362 (615)
399 1p77_A Shikimate 5-dehydrogena 65.8 2.7 9.1E-05 39.7 2.3 31 33-63 120-151 (272)
400 3h5n_A MCCB protein; ubiquitin 65.8 3.8 0.00013 40.2 3.5 33 32-64 118-152 (353)
401 3c7a_A Octopine dehydrogenase; 65.8 3.3 0.00011 41.5 3.1 28 34-61 4-33 (404)
402 3gpi_A NAD-dependent epimerase 65.8 3.8 0.00013 38.6 3.4 32 34-65 5-37 (286)
403 2hk9_A Shikimate dehydrogenase 65.6 3.6 0.00012 38.8 3.2 31 33-63 130-161 (275)
404 3dfu_A Uncharacterized protein 65.5 2.2 7.5E-05 39.1 1.6 29 34-62 8-37 (232)
405 1guz_A Malate dehydrogenase; o 65.2 3.7 0.00013 39.6 3.2 30 35-64 3-35 (310)
406 3qsg_A NAD-binding phosphogluc 65.2 3.6 0.00012 39.7 3.1 31 33-63 25-57 (312)
407 2rir_A Dipicolinate synthase, 65.2 3.8 0.00013 39.2 3.3 32 33-64 158-190 (300)
408 1leh_A Leucine dehydrogenase; 64.9 3.7 0.00012 40.5 3.2 30 33-62 174-204 (364)
409 3c24_A Putative oxidoreductase 64.6 3.8 0.00013 38.8 3.1 30 34-63 13-44 (286)
410 2g5c_A Prephenate dehydrogenas 64.6 3.7 0.00013 38.7 3.1 29 35-63 4-35 (281)
411 2wtb_A MFP2, fatty acid multif 64.4 3.7 0.00013 44.7 3.3 31 34-64 314-345 (725)
412 4gx0_A TRKA domain protein; me 64.2 4.1 0.00014 42.9 3.6 34 33-66 349-383 (565)
413 1gte_A Dihydropyrimidine dehyd 63.7 3.7 0.00013 46.7 3.3 31 34-64 334-366 (1025)
414 3nks_A Protoporphyrinogen oxid 63.5 3.2 0.00011 42.5 2.5 55 203-272 240-294 (477)
415 3ggo_A Prephenate dehydrogenas 63.5 4 0.00014 39.4 3.1 31 34-64 35-68 (314)
416 3l6d_A Putative oxidoreductase 63.4 5.6 0.00019 38.1 4.1 32 33-64 10-42 (306)
417 4g65_A TRK system potassium up 63.4 4.7 0.00016 41.2 3.8 32 33-64 236-267 (461)
418 3fbt_A Chorismate mutase and s 63.3 5.1 0.00018 37.9 3.7 32 32-63 122-155 (282)
419 3ew7_A LMO0794 protein; Q8Y8U8 63.2 4.8 0.00017 35.9 3.5 30 35-64 3-34 (221)
420 1m6i_A Programmed cell death p 63.1 7.7 0.00026 40.0 5.4 39 28-66 7-48 (493)
421 2weu_A Tryptophan 5-halogenase 63.1 6.4 0.00022 40.7 4.8 48 205-266 181-228 (511)
422 4huj_A Uncharacterized protein 63.0 2.1 7.3E-05 38.8 1.0 30 34-63 25-56 (220)
423 3tnl_A Shikimate dehydrogenase 62.8 4.6 0.00016 38.9 3.4 31 33-63 155-187 (315)
424 3h2s_A Putative NADH-flavin re 62.7 4.6 0.00016 36.2 3.3 29 35-63 3-33 (224)
425 2x5o_A UDP-N-acetylmuramoylala 62.7 3.7 0.00013 41.7 2.9 32 34-65 7-39 (439)
426 1ur5_A Malate dehydrogenase; o 62.7 4.3 0.00015 39.0 3.2 30 34-63 4-35 (309)
427 1lu9_A Methylene tetrahydromet 62.4 4.5 0.00016 38.3 3.3 31 33-63 120-152 (287)
428 1pgj_A 6PGDH, 6-PGDH, 6-phosph 62.0 4.1 0.00014 41.9 3.0 30 34-63 3-33 (478)
429 3jyo_A Quinate/shikimate dehyd 61.7 4.7 0.00016 38.2 3.2 31 33-63 128-160 (283)
430 3pqe_A L-LDH, L-lactate dehydr 61.3 4.7 0.00016 39.1 3.2 30 34-63 7-39 (326)
431 3u62_A Shikimate dehydrogenase 61.3 4.9 0.00017 37.4 3.2 30 34-63 110-141 (253)
432 3don_A Shikimate dehydrogenase 61.2 4.3 0.00015 38.3 2.8 32 33-64 118-151 (277)
433 3gvp_A Adenosylhomocysteinase 61.1 4.7 0.00016 40.5 3.2 32 32-63 220-252 (435)
434 3dqp_A Oxidoreductase YLBE; al 60.9 5.9 0.0002 35.5 3.6 30 35-64 3-34 (219)
435 1hdo_A Biliverdin IX beta redu 60.9 5.3 0.00018 35.1 3.3 31 34-64 5-37 (206)
436 1y8q_A Ubiquitin-like 1 activa 60.9 4.8 0.00017 39.4 3.2 34 32-65 36-71 (346)
437 1oju_A MDH, malate dehydrogena 60.8 4.9 0.00017 38.3 3.1 30 35-64 3-35 (294)
438 3e8x_A Putative NAD-dependent 60.8 5.2 0.00018 36.3 3.3 31 34-64 23-55 (236)
439 1pjq_A CYSG, siroheme synthase 60.8 4.8 0.00016 41.1 3.3 30 34-63 14-44 (457)
440 1i36_A Conserved hypothetical 60.7 3.9 0.00013 38.1 2.4 28 35-62 3-31 (264)
441 3d1l_A Putative NADP oxidoredu 60.7 4.7 0.00016 37.6 3.0 30 34-63 12-43 (266)
442 3o8q_A Shikimate 5-dehydrogena 60.5 6.1 0.00021 37.4 3.7 31 33-63 127-159 (281)
443 3g79_A NDP-N-acetyl-D-galactos 60.4 6.3 0.00022 40.4 4.1 33 33-65 19-54 (478)
444 3k7m_X 6-hydroxy-L-nicotine ox 60.3 7.5 0.00026 39.0 4.7 45 206-266 213-257 (431)
445 3o38_A Short chain dehydrogena 60.1 5 0.00017 37.4 3.0 30 34-63 24-56 (266)
446 3k30_A Histamine dehydrogenase 60.0 5.2 0.00018 43.3 3.6 33 34-66 525-560 (690)
447 2pgd_A 6-phosphogluconate dehy 59.9 4.7 0.00016 41.5 3.0 31 34-64 4-35 (482)
448 1lqt_A FPRA; NADP+ derivative, 59.9 6 0.00021 40.3 3.8 50 210-270 265-328 (456)
449 3zwc_A Peroxisomal bifunctiona 59.9 5.3 0.00018 43.4 3.5 32 33-64 317-349 (742)
450 2izz_A Pyrroline-5-carboxylate 59.6 5.2 0.00018 38.7 3.2 32 33-64 23-59 (322)
451 1zej_A HBD-9, 3-hydroxyacyl-CO 59.5 6.1 0.00021 37.6 3.5 31 34-64 14-44 (293)
452 2dvm_A Malic enzyme, 439AA lon 59.5 5.2 0.00018 40.4 3.2 29 33-61 187-219 (439)
453 2i6t_A Ubiquitin-conjugating e 59.5 5.4 0.00018 38.2 3.2 32 33-64 15-49 (303)
454 1lnq_A MTHK channels, potassiu 59.4 4.6 0.00016 39.2 2.7 30 34-64 117-147 (336)
455 2yjz_A Metalloreductase steap4 63.8 1.9 6.6E-05 38.6 0.0 31 34-64 21-52 (201)
456 2e4g_A Tryptophan halogenase; 59.3 6.3 0.00021 41.3 3.9 48 205-266 202-250 (550)
457 3gvi_A Malate dehydrogenase; N 59.3 5.4 0.00018 38.6 3.2 32 33-64 8-41 (324)
458 2d5c_A AROE, shikimate 5-dehyd 59.1 5.2 0.00018 37.3 3.0 30 34-63 118-148 (263)
459 1ff9_A Saccharopine reductase; 59.1 7.1 0.00024 39.7 4.2 30 34-63 5-35 (450)
460 2p4q_A 6-phosphogluconate dehy 59.0 5.3 0.00018 41.2 3.3 33 32-64 10-43 (497)
461 1tt5_B Ubiquitin-activating en 59.0 5.8 0.0002 40.1 3.4 33 32-64 40-74 (434)
462 1c1d_A L-phenylalanine dehydro 58.8 5.6 0.00019 39.0 3.2 30 33-62 176-206 (355)
463 2rcy_A Pyrroline carboxylate r 58.7 6.7 0.00023 36.4 3.7 31 34-64 6-41 (262)
464 3ldh_A Lactate dehydrogenase; 58.5 5.7 0.00019 38.5 3.1 31 33-63 22-55 (330)
465 3ktd_A Prephenate dehydrogenas 58.4 5.3 0.00018 39.0 3.0 30 34-63 10-40 (341)
466 3t4e_A Quinate/shikimate dehyd 58.3 6.2 0.00021 37.9 3.4 31 33-63 149-181 (312)
467 3pwz_A Shikimate dehydrogenase 58.2 5.9 0.0002 37.3 3.2 31 33-63 121-153 (272)
468 1edz_A 5,10-methylenetetrahydr 58.2 7.8 0.00027 37.3 4.0 32 32-63 177-210 (320)
469 3i6d_A Protoporphyrinogen oxid 58.0 11 0.00037 38.1 5.5 46 212-272 248-293 (470)
470 1yb4_A Tartronic semialdehyde 57.8 4.9 0.00017 38.0 2.6 28 34-61 5-33 (295)
471 2ahr_A Putative pyrroline carb 57.7 6.8 0.00023 36.3 3.5 30 34-63 5-35 (259)
472 3ce6_A Adenosylhomocysteinase; 57.2 5.9 0.0002 40.8 3.2 32 33-64 275-307 (494)
473 1wdk_A Fatty oxidation complex 57.2 4.3 0.00015 44.1 2.3 31 34-64 316-347 (715)
474 2cvz_A Dehydrogenase, 3-hydrox 57.1 8.3 0.00028 36.3 4.1 29 35-63 4-32 (289)
475 2iz1_A 6-phosphogluconate dehy 57.1 6.5 0.00022 40.3 3.5 31 33-63 6-37 (474)
476 3p7m_A Malate dehydrogenase; p 56.5 6.4 0.00022 38.1 3.2 31 34-64 7-39 (321)
477 1npy_A Hypothetical shikimate 56.2 7.2 0.00025 36.6 3.4 31 33-63 120-152 (271)
478 3vku_A L-LDH, L-lactate dehydr 56.1 6.5 0.00022 38.0 3.2 30 34-63 11-43 (326)
479 3r6d_A NAD-dependent epimerase 56.1 7.1 0.00024 35.0 3.3 30 35-64 8-40 (221)
480 2dbq_A Glyoxylate reductase; D 56.1 7.4 0.00025 37.8 3.6 32 33-64 151-183 (334)
481 4gx0_A TRKA domain protein; me 55.9 6.8 0.00023 41.2 3.5 33 32-64 127-160 (565)
482 1np3_A Ketol-acid reductoisome 55.6 6.3 0.00022 38.4 3.0 30 34-63 18-48 (338)
483 4ffl_A PYLC; amino acid, biosy 55.6 7.7 0.00026 38.0 3.7 31 35-65 4-35 (363)
484 3n58_A Adenosylhomocysteinase; 55.5 6.7 0.00023 39.5 3.2 31 33-63 248-279 (464)
485 1y8q_B Anthracycline-, ubiquit 55.5 6.8 0.00023 41.6 3.3 33 33-65 18-52 (640)
486 3hyw_A Sulfide-quinone reducta 55.2 17 0.0006 36.4 6.4 32 34-65 4-38 (430)
487 3gt0_A Pyrroline-5-carboxylate 55.2 6.5 0.00022 36.2 2.9 30 34-63 4-38 (247)
488 2dkn_A 3-alpha-hydroxysteroid 55.1 7.9 0.00027 35.4 3.5 30 35-64 4-35 (255)
489 2o3j_A UDP-glucose 6-dehydroge 55.0 7.7 0.00026 39.9 3.7 30 34-63 11-43 (481)
490 2gcg_A Glyoxylate reductase/hy 54.8 8 0.00027 37.5 3.6 32 33-64 156-188 (330)
491 1gpj_A Glutamyl-tRNA reductase 54.8 6.9 0.00024 39.2 3.2 31 33-63 168-200 (404)
492 4aj2_A L-lactate dehydrogenase 54.6 7.2 0.00025 37.8 3.2 33 31-63 18-53 (331)
493 1y6j_A L-lactate dehydrogenase 54.5 7.2 0.00025 37.6 3.2 32 33-64 8-42 (318)
494 3h9u_A Adenosylhomocysteinase; 54.5 7.1 0.00024 39.3 3.2 31 33-63 212-243 (436)
495 3nep_X Malate dehydrogenase; h 54.4 7.3 0.00025 37.5 3.2 30 35-64 3-35 (314)
496 2pd4_A Enoyl-[acyl-carrier-pro 54.4 9.8 0.00033 35.6 4.1 30 35-64 9-42 (275)
497 4gwg_A 6-phosphogluconate dehy 53.9 8.4 0.00029 39.5 3.7 32 33-64 5-37 (484)
498 1b37_A Protein (polyamine oxid 53.9 16 0.00056 37.1 6.0 43 512-556 422-464 (472)
499 3s2u_A UDP-N-acetylglucosamine 53.8 8.1 0.00028 38.0 3.5 27 34-60 4-36 (365)
500 2qyt_A 2-dehydropantoate 2-red 53.7 6.6 0.00023 37.5 2.8 29 34-62 10-45 (317)
No 1
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=100.00 E-value=3.5e-81 Score=668.05 Aligned_cols=490 Identities=22% Similarity=0.319 Sum_probs=356.0
Q ss_pred CccEEEECCCcchHHHHHhhhc--CCeEEEEeeCCCCCCCCCccchhhhhhcc----CCCCCCCcCccccCCCcccccCc
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSPYGNPNITNLGSFGAAL----SDLSSTSPSQRFISEDGVINSRA 105 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae--g~~VlvLE~G~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~g 105 (557)
+|||||||+|+|||++|.||+| +.+|||||+|+.....+....|..+.... .+|.|.+.+|..+.++.+.+++|
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~~~~~~~~~p~~~~~~~~~~~~~w~~~t~pq~~~~~r~~~~~rG 81 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSDENVLGAEAPLLAPGLVPNSIFDWNYTTTAQAGYNGRSIAYPRG 81 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCCTTCGGGTSGGGSGGGSSSSTTBCCCBCCCCGGGTTCCCBCCCB
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcccCCCceeCcchHHHhcCCCccccccccccCCCCCCceEeccCC
Confidence 6999999999999999999999 79999999998764444444444433322 26889999999999999999999
Q ss_pred ceecccccccCceeecCCcchhc-------cCCCChhhhhhhhhhhhhhhcc--------------C-----------CC
Q 008675 106 RVLGGGSCLNAGFYTRAAPYYVR-------EVGWDERLVNESYQWVEKVVAF--------------E-----------PP 153 (557)
Q Consensus 106 ~~lGG~s~~n~~~~~r~~~~~~~-------~~gw~~~~~~~~~~~~e~~~~~--------------~-----------~~ 153 (557)
++|||+|++|+|+|.|+++.+|+ ..||+|+++.|||++.|+.... + +.
T Consensus 82 k~lGGsS~iN~m~~~Rg~~~d~d~W~~~~G~~gWs~~~~~pyf~k~E~~~~~~~~~~~~~~~~~~~hG~~Gp~~v~~~~~ 161 (566)
T 3fim_B 82 RMLGGSSSVHYMVMMRGSTEDFDRYAAVTGDEGWNWDNIQQFVRKNEMVVPPADNHNTSGEFIPAVHGTNGSVSISLPGF 161 (566)
T ss_dssp CBTTGGGGTSCCBCCCCCHHHHHHHHHHHTCTTSSHHHHHHHHHHHEEECCCTTCCCCTTTSCGGGSCBSSSEEEBSCSS
T ss_pred cEEcCcccccceEEecCCHHHHHHHHhcCCCCCcCHHHHHHHHHHHhccCCccccccccccCCccccCCCCCeeeecCCC
Confidence 99999999999999999997654 2679999999999999875411 0 11
Q ss_pred CCchhHHHHHHHHHc--CCCCCCCCCcCCCCceeeeeeEEC---CCCccccHHH-hhh-hcCCCCcEEEcCcEEEEEEEe
Q 008675 154 MRQWQSAVRDGLVEV--GVLPYNGFTYDHMYGTKIGGTIFD---QNGQRHTAAD-LLE-YANPSGLTLLLHASVHKVLFR 226 (557)
Q Consensus 154 ~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~---~~g~r~~~~~-~l~-~~~~~n~~i~~~~~V~~i~~~ 226 (557)
..++...+.++++++ |++...++. .+...|...++ .+|.|+++.. ||. ...++|++|++++.|+||+++
T Consensus 162 ~~~~~~~~~~a~~~~~~G~~~~~d~n----~~~~~G~~~~~~~~~~g~R~sa~~ayL~p~~~r~NL~Vlt~a~V~rIl~~ 237 (566)
T 3fim_B 162 PTPLDDRVLATTQEQSEEFFFNPDMG----TGHPLGISWSIASVGNGQRSSSSTAYLRPAQSRPNLSVLINAQVTKLVNS 237 (566)
T ss_dssp CCTHHHHHHHHHHHTHHHHCBCSCGG----GSCCCEEEECCBSEETTEECCHHHHTHHHHTTCTTEEEESSCEEEEEECC
T ss_pred CCHHHHHHHHHHHHHhcCCCccCCCC----CCCcceEEeeeeecCCCEEcCHHHHHhhhhccCCCeEEECCCEEEEEEee
Confidence 234567888999998 876432221 12222322221 3788998875 665 667899999999999999998
Q ss_pred cCCCCCCeEEEEEEEeCCC-CeeEEeeecCCceEEEEccCCcCchHHHHhhc--------CCCcceeecCCccCCcCCCC
Q 008675 227 IKGKARPVAHGVVFRDATG-AKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSDN 297 (557)
Q Consensus 227 ~~~~~~~~~~gV~~~~~~g-~~~~v~~~~~aa~~VIlaaGa~~sp~lLl~Sg--------~~gi~~~~~~p~VG~nl~dH 297 (557)
...++..+|+||++.+.+| +.++++ ++|+||||||+|+||+|||+|| ++||+++.|+|+||+|||||
T Consensus 238 ~~~~g~~rA~GVe~~~~~g~~~~~v~----A~kEVILsAGai~SPqlL~lSGIGp~~~L~~~gI~vv~dlPgVG~NLqDH 313 (566)
T 3fim_B 238 GTTNGLPAFRCVEYAEQEGAPTTTVC----AKKEVVLSAGSVGTPILLQLSGIGDENDLSSVGIDTIVNNPSVGRNLSDH 313 (566)
T ss_dssp EEETTEEECCEEEEESSTTSCCEEEE----EEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCC
T ss_pred cCCCCCCEEEEEEEEECCCceEEEEE----eeeEEEEecCCcCChHHHHhcCCCChHHHhhcCCCceecCcchhhhhhcC
Confidence 1000012999999997556 667776 6699999999999999999999 89999999999999999999
Q ss_pred CCceEEeeCCCcccch-h-HHH-hhccchhhhhhhccCCcccCCCCCCCCcccccccc-----cccccCCCCCCCHHHHH
Q 008675 298 PMNAIFVPSPVPVEVS-L-IQV-VGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKI-----GQLSKVPPKQRTPEAIA 369 (557)
Q Consensus 298 ~~~~~~~~~~~~~~~~-~-~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 369 (557)
+.+.+.+..+.+.... . ... ........|.....|+.-... ....+++.... ............+++ +
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~---~~~~~f~~~~~~~~~~~~~~~~~~~~~~pd~-~ 389 (566)
T 3fim_B 314 LLLPAAFFVNSNQTFDNIFRDSSEFNVDLDQWTNTRTGPLTALI---ANHLAWLRLPSNSSIFQTFPDPAAGPNSAHW-E 389 (566)
T ss_dssp EEECCEEEESCSCSSGGGGTCHHHHHHHHHHHHHHSCSGGGCCS---CSEEEEECCCTTCGGGGTSCCCSSSTTSCSE-E
T ss_pred ccceEEEEeCCCcccchhhcChHHHHHHHHHHHhcCCCCcccCh---hhheeeeccccchhhhhhhccccccCCCCCE-E
Confidence 9887776655432111 0 000 000112245444444321100 00001110000 000000000000110 0
Q ss_pred HHHhhh--c-cC-CCCCccceEEEEeecccCcceEEEeccCCCCCCCeEecCCCCCHHHHHHHHHHHHHHHHHHcccccc
Q 008675 370 EAIENM--K-AL-DDPAFRGGFILEKVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFS 445 (557)
Q Consensus 370 ~~~~~~--~-~~-~~~~~~~~~~~~~~~~p~s~g~V~l~~~d~~~~p~i~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 445 (557)
.++... . .. ........++...+++|.|||+|+|+++||++.|+|+++|+.+|.|++.+.++++.+++++++.+++
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~SrG~V~L~s~dp~~~P~i~~~yl~~~~D~~~~~~~~~~~~~i~~~~~~~ 469 (566)
T 3fim_B 390 TIFSNQWFHPAIPRPDTGSFMSVTNALISPVARGDIKLATSNPFDKPLINPQYLSTEFDIFTMIQAVKSNLRFLSGQAWA 469 (566)
T ss_dssp EEEESSCCCTTSCCCSSCCEEEEEEEESSCSCCBEEECSSSCTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHTSGGGT
T ss_pred EEecccchhhcccCCCCCCEEEEEEeecCCccceEEEecCCCCCCCceeccccCCCccHHHHHHHHHHHHHHHHhCcccC
Confidence 000000 0 00 0001124566677899999999999999999999999999999999999999999999999998888
Q ss_pred ccccccCcchhhhccccCCCCCCCC--CCCCChHHHHHHHHhccccccccccccccC------cccCCCCeEeccCCceE
Q 008675 446 KFKYESMSVPILVNMTASAPVNLLP--RHSNASTSLEQFCRDTVMTIWHYHGGCQVG------KVVDHDYKVLGVDALRV 517 (557)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~~~~~~~~~~~H~~GT~rMG------~VVD~~~rV~g~~nL~V 517 (557)
.+...+. .| ....+|++|++|+|+...+.+|++|||||| +|||++|||||++||||
T Consensus 470 ~~~~~~~----------------~P~~~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~~~~VVD~~lrV~Gv~~LrV 533 (566)
T 3fim_B 470 DFVIRPF----------------DPRLRDPTDDAAIESYIRDNANTIFHPVGTASMSPRGASWGVVDPDLKVKGVDGLRI 533 (566)
T ss_dssp TTEEEES----------------SGGGSCTTCHHHHHHHHHHHCEECSCCBCTTCBCCTTCSSCSBCTTCBBTTCBSEEE
T ss_pred Ccccccc----------------CCCcccccchHHHHHHHhhcccccccccCccccCCcccCCccCCCCCeEccCCCcEE
Confidence 8764442 22 235789999999999999999999999998 79999999999999999
Q ss_pred eeccCCCCCCCCChHHHHHHHHHHHHHHHHHh
Q 008675 518 IDGSTFYYSPGTNPQATVMMLGRYMGVRILSE 549 (557)
Q Consensus 518 ~DaSv~P~~~~~np~lTi~ala~r~a~~i~~~ 549 (557)
|||||||+++++||++|+||||||+||+|+++
T Consensus 534 vDaSv~P~~~~~n~~~~~~~iaekaAd~I~~~ 565 (566)
T 3fim_B 534 VDGSILPFAPNAHTQGPIYLVGKQGADLIKAD 565 (566)
T ss_dssp CSGGGCCSCCSSCTHHHHHHHHHHHHHHHHHT
T ss_pred cccccCCCCCCcCcHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999977654
No 2
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=100.00 E-value=2.8e-80 Score=662.38 Aligned_cols=501 Identities=42% Similarity=0.768 Sum_probs=379.5
Q ss_pred cCCCcccccccccCCCCCCccEEEECCCcchHHHHHhhhcCCeEEEEeeCCCCCCCCCccchhhhhhccCCC-CCCCcCc
Q 008675 14 AAPNYSFMHNATAAQPVSYYDYIIIGGGTAGCPLAATLSQNASVLLLERGGSPYGNPNITNLGSFGAALSDL-SSTSPSQ 92 (557)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~DvIIVGsG~aG~~~A~~Laeg~~VlvLE~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 92 (557)
....++|+..+....+..+|||||||||+|||++|.||+||.+|||||+|+.....+....+..+...+.++ .|.+.+|
T Consensus 8 ~~~~~~~~~~~~~~~~~~~yD~IIVGsG~AG~v~A~rLseg~~VlvLEaG~~~~~~~~~~~~~~~~~~~~~~~~~~t~~q 87 (536)
T 1ju2_A 8 DFSYLSFAYDATDLELEGSYDYVIVGGGTSGCPLAATLSEKYKVLVLERGSLPTAYPNVLTADGFVYNLQQEDDGKTPVE 87 (536)
T ss_dssp CCGGGGGEEEGGGSCSEEEEEEEEECCSTTHHHHHHHHTTTSCEEEECSSBCGGGSGGGGBGGGHHHHHHSCCCSSSSEE
T ss_pred CcccCccccCcccccccCcccEEEECccHHHHHHHHHHhcCCcEEEEecCCCcCCCcceecchhHhhhccCCCcCcCCCc
Confidence 345678887776666677899999999999999999999999999999998653334444444443332221 1456667
Q ss_pred cccCCCcccccCcceecccccccCceeecCCcchhccCC--CChhhhhhhhhhhhhhhccCCCCCchhHHHHHHHHHcCC
Q 008675 93 RFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVREVG--WDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGV 170 (557)
Q Consensus 93 ~~~~~~~~~~~~g~~lGG~s~~n~~~~~r~~~~~~~~~g--w~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~g~ 170 (557)
....++++.+.+|++|||+|.+|+|.|.|+.+.+++..| |+|+++.|||+++|+.+...+...++...+.+++.++|+
T Consensus 88 ~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~d~~~~G~~W~~~~~~p~~~~~e~~~~~~~~~~~~~~~~~~a~~~~G~ 167 (536)
T 1ju2_A 88 RFVSEDGIDNVRGRVLGGTSIINAGVYARANTSIYSASGVDWDMDLVNQTYEWVEDTIVYKPNSQSWQSVTKTAFLEAGV 167 (536)
T ss_dssp EEECTTSCEEEEECBTTGGGGTSCCEECBCCTTSSTTSSSCCCHHHHHHHHHHHHHHHCBCCCCCHHHHHHHHHHHHTTC
T ss_pred cccCCCcceeecceeccccccccCeEEEeCCHHHHhhccCCCChHHHHHHHHhhhcccCCCCCCCcHHHHHHHHHHHcCC
Confidence 767778888999999999999999999999999888778 999999999999999887777667788889999999998
Q ss_pred CCCCCCCcCCCCceeeeeeEECCCCccccHHHhhhhcCCCCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCCeeEE
Q 008675 171 LPYNGFTYDHMYGTKIGGTIFDQNGQRHTAADLLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRA 250 (557)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~l~~~~~~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~v 250 (557)
++.++...+...++..+...++.+|.|+++..|++.++++|++|++++.|++|+++++ +..+++||++.+.+|+.+++
T Consensus 168 ~~~~~~~~~~~~g~~~g~~~~~~~g~r~s~~~~~~~~~~~~~~v~~~~~v~~i~~~~~--~~~~~~GV~~~~~~g~~~~~ 245 (536)
T 1ju2_A 168 HPNHGFSLDHEEGTRITGSTFDNKGTRHAADELLNKGNSNNLRVGVHASVEKIIFSNA--PGLTATGVIYRDSNGTPHQA 245 (536)
T ss_dssp CCEEEECCBCCSEEEECEESBCTTSBBCCGGGGGGGSCTTTEEEEESCEEEEEEECCS--SSCBEEEEEEECTTSCEEEE
T ss_pred CCCCCcccCCCCCceeeeEEECCCCeEecHHHhhhhhcCCCcEEEeCCEEEEEEECCC--CCCEEEEEEEEeCCCceEEE
Confidence 7665443444455555545455788998877777777889999999999999999863 11389999998756766555
Q ss_pred eeecCCceEEEEccCCcCchHHHHhhc--------CCCcceeecCCccCCcCCCCCCceEEeeCCCcccchhHHHhhccc
Q 008675 251 YLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQ 322 (557)
Q Consensus 251 ~~~~~aa~~VIlaaGa~~sp~lLl~Sg--------~~gi~~~~~~p~VG~nl~dH~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (557)
+++ ++|+||||||+++||+||++|| ++||+++.++|+||+|||||+...+.+..+.+....+....++.
T Consensus 246 ~v~--a~k~VILaaGa~~sp~lL~~SGig~~~~l~~~gi~~~~dlP~VG~NL~DH~~~~~~~~~~~~~~~~~~~~~~~~- 322 (536)
T 1ju2_A 246 FVR--SKGEVIVSAGTIGTPQLLLLSGVGPESYLSSLNIPVVLSHPYVGQFLHDNPRNFINILPPNPIEPTIVTVLGIS- 322 (536)
T ss_dssp EEE--EEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTEEEECCEEEEEEECCSSCCCCCCCCEEEEC-
T ss_pred Eec--cCCEEEEcCcccCCHHHHHHcCCCCHHHHHhcCCceEecCcccccchhcCcceeEEEEeCCCcccccchhhhHH-
Confidence 322 4799999999999999999999 78999999999999999999988777766544221110000110
Q ss_pred hhhhhhhccCCcccCCCCCCCCcccccccccccccCCCCCCCHHHHHHHHhhhccCCCCCccceEEEEeecccCcceEEE
Q 008675 323 FGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLE 402 (557)
Q Consensus 323 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~g~V~ 402 (557)
..|.....|+ +......+...+... ...+. ..+..+.+.+++|.|||+|+
T Consensus 323 -~~~~~~~~g~--------------~~~~~~~~~~~~~~~-------------~~~~~--~~~~~~~~~l~~P~SrG~V~ 372 (536)
T 1ju2_A 323 -NDFYQCSFSS--------------LPFTTPPFGFFPSSS-------------YPLPN--STFAHFASKVAGPLSYGSLT 372 (536)
T ss_dssp -SSEEEEEEEE--------------CCCSSCCBTTBSSSC-------------CCCCS--SCEEEEEEEESSCSCCEEEE
T ss_pred -HHHHHcCCCC--------------CCCChhhheeecCcc-------------cCCCC--cceEEEeeecCCCCcceEEE
Confidence 0122111121 000000000000000 01111 12335566778999999999
Q ss_pred e-ccCCCCCCCeEecCCCCCHHHHHHHHHHHHHHHHHHccccccccccccCc-chhhhccccCCCCCCCCCCCCChHHHH
Q 008675 403 L-RTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMS-VPILVNMTASAPVNLLPRHSNASTSLE 480 (557)
Q Consensus 403 l-~~~d~~~~p~i~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~ 480 (557)
| +++||++.|+|+++|+.++.|++.+.++++.+++++++.+++.+...+.. .+.+.+.. ...|...+++++|+
T Consensus 373 L~~s~Dp~~~P~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~-----~~~p~~~~~d~~~~ 447 (536)
T 1ju2_A 373 LKSSSNVRVSPNVKFNYYSNLTDLSHCVSGMKKIGELLSTDALKPYKVEDLPGVEGFNILG-----IPLPKDQTDDAAFE 447 (536)
T ss_dssp CSCSSCTTSCCEECCCTTCSHHHHHHHHHHHHHHHHHHTSGGGGGGCSSCCSTTCSCCBSS-----SCCCSCTTCHHHHH
T ss_pred eCCCCCcccCceecccccCCccHHHHHHHHHHHHHHHHcCccchhhhccccccCCCccccc-----cCCCcccCCHHHHH
Confidence 9 89999999999999999999999999999999999999988887644310 00000000 00233346889999
Q ss_pred HHHHhccccccccccccccCcccCCCCeEeccCCceEeeccCCCCCCCCChHHHHHHHHHHHHHHHHHhhhhcc
Q 008675 481 QFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSERLASN 554 (557)
Q Consensus 481 ~~~~~~~~~~~H~~GT~rMG~VVD~~~rV~g~~nL~V~DaSv~P~~~~~np~lTi~ala~r~a~~i~~~~~~~~ 554 (557)
+|+|....+.+|++||||||+|||++|||||++|||||||||||+++++||++|+||||||+|+.|+++.+.++
T Consensus 448 ~~ir~~~~t~~H~~GTcrMG~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~t~~aiAer~A~~ii~~~~~~~ 521 (536)
T 1ju2_A 448 TFCRESVASYWHYHGGCLVGKVLDGDFRVTGINALRVVDGSTFPYTPASHPQGFYLMLGRYVGIKILQERSASD 521 (536)
T ss_dssp HHHHHHCEECSCCEESSCBTTTBCTTSBBTTCBTEEECSGGGCSSCSSSSCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHhccCccccCcCccCCccEECCCCeEcCCCCeEEeecccCCCCCCcchHHHHHHHHHHHHHHHHHhhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999887754
No 3
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=100.00 E-value=5.1e-80 Score=659.70 Aligned_cols=485 Identities=23% Similarity=0.300 Sum_probs=348.3
Q ss_pred CCCCCccEEEECCCcchHHHHHhhhc--CCeEEEEeeCCCCC-CCCCccchhhhhhcc---CCCCCCCcCccccCCCccc
Q 008675 28 QPVSYYDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSPY-GNPNITNLGSFGAAL---SDLSSTSPSQRFISEDGVI 101 (557)
Q Consensus 28 ~~~~~~DvIIVGsG~aG~~~A~~Lae--g~~VlvLE~G~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 101 (557)
....+|||||||||+|||++|.||+| +.+|||||+|+... ..+.+..+..+...+ .+|.|.+.+|. ..++.+.
T Consensus 15 ~~~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~~q~-~~~r~~~ 93 (583)
T 3qvp_A 15 VSGRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYGDIFGSSVDHAYETVELA-TNNQTAL 93 (583)
T ss_dssp TTTCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSCCCTTSCHHHHBGGGTTTTTTSTTBCCEECCCCT-TTSCCCE
T ss_pred cCCCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCcceechhhHHhhcCCcccCCccccccC-CCCCeee
Confidence 34467999999999999999999998 78999999998432 234444554444333 36888888775 5778889
Q ss_pred ccCcceecccccccCceeecCCcchhcc------C-CCChhhhhhhhhhhhhhhc---------------cC--------
Q 008675 102 NSRARVLGGGSCLNAGFYTRAAPYYVRE------V-GWDERLVNESYQWVEKVVA---------------FE-------- 151 (557)
Q Consensus 102 ~~~g~~lGG~s~~n~~~~~r~~~~~~~~------~-gw~~~~~~~~~~~~e~~~~---------------~~-------- 151 (557)
++||++|||+|++|+|+|.|+++.+++. . ||+|+++.|||++.|.... ++
T Consensus 94 ~~rGk~LGGsS~iN~m~y~Rg~~~Dyd~W~~~g~~~gW~~~~~lpyf~k~E~~~~~~~~~~~~~~~~~~~~hG~~Gpl~v 173 (583)
T 3qvp_A 94 IRSGNGLGGSTLVNGGTWTRPHKAQVDSWETVFGNEGWNWDNVAAYSLQAERARAPNAKQIAAGHYFNASCHGVNGTVHA 173 (583)
T ss_dssp ECCBCSTTGGGGTSCCBCCCCCHHHHHHHHHTSCCTTCSHHHHHHHHHHHEEECCCCHHHHHHTCCCCGGGSCSSSSEEE
T ss_pred ccCceecCCcCcccceEEEeCCHHHHHHHHHhCCCCCCChhHHHHHHHHHHhccCCcchhhcccccCCccccCCCCCEEe
Confidence 9999999999999999999999976653 3 8999999999999987521 00
Q ss_pred --C----CCCchhHHHHHHHHHcCCCCCCCCCcCCCCceeeeeeE----ECCCCccccHHH-hhh-hcCCCCcEEEcCcE
Q 008675 152 --P----PMRQWQSAVRDGLVEVGVLPYNGFTYDHMYGTKIGGTI----FDQNGQRHTAAD-LLE-YANPSGLTLLLHAS 219 (557)
Q Consensus 152 --~----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~g~r~~~~~-~l~-~~~~~n~~i~~~~~ 219 (557)
+ ...++.+.+.++++++|++...++ ..+...|... .+.+|.|+++.. ||. ..+++|++|++++.
T Consensus 174 ~~~~~~~~~~~~~~~~~~a~~~~G~~~~~D~----n~~~~~G~~~~~~t~~~~g~R~saa~ayL~p~~~r~NL~V~t~a~ 249 (583)
T 3qvp_A 174 GPRDTGDDYSPIVKALMSAVEDRGVPTKKDF----GCGDPHGVSMFPNTLHEDQVRSDAAREWLLPNYQRPNLQVLTGQY 249 (583)
T ss_dssp BCCCCSSCBCTHHHHHHHHHHTTTCCBCCCT----TSSCCCEEECCCBSBCTTCBBCCHHHHHTTTTTTCTTEEEECSCE
T ss_pred cCCCCcccCCHHHHHHHHHHHHcCCCcCCCC----CCCCCceecccceeEcCCCcEecHHHHHHHHhhcCCCcEEEcCCE
Confidence 1 123556788899999998743322 2222223222 234688988865 764 66789999999999
Q ss_pred EEEEEEecCCCCCCeEEEEEEEeCCCCeeEEeeecCCceEEEEccCCcCchHHHHhhc--------CCCcceeecCCccC
Q 008675 220 VHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVG 291 (557)
Q Consensus 220 V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~v~~~~~aa~~VIlaaGa~~sp~lLl~Sg--------~~gi~~~~~~p~VG 291 (557)
|+||++++.+ .+.+|+||++.+.+|+.++++ ++|+||||||+|+||+|||+|| ++|||++.|+| ||
T Consensus 250 V~rIl~d~~~-~~~ra~GV~~~~~~G~~~~v~----A~kEVILsAGa~~SPqLL~lSGIGp~~~L~~~GI~vv~dLP-VG 323 (583)
T 3qvp_A 250 VGKVLLSQNG-TTPRAVGVEFGTHKGNTHNVY----AKHEVLLAAGSAVSPTILEYSGIGMKSILEPLGIDTVVDLP-VG 323 (583)
T ss_dssp EEEEEEECSS-SSCEEEEEEEESSTTCEEEEE----EEEEEEECSCTTTHHHHHHHTTBSCHHHHGGGTCCCSBCCC-TT
T ss_pred EEEEEeccCC-CCCEEEEEEEEecCCcEEEEE----ECCEEEEeCCccCCHHHHHHcCCCCHHHHHhCCCCceeeCc-cc
Confidence 9999998421 123999999986678877777 6689999999999999999999 89999999999 99
Q ss_pred CcCCCCCCceEEeeCCCccc--------chhHHHhhcc--chhhhhhhccCCcccCCCCCCCCcccccccccccccCCCC
Q 008675 292 QGMSDNPMNAIFVPSPVPVE--------VSLIQVVGIT--QFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPK 361 (557)
Q Consensus 292 ~nl~dH~~~~~~~~~~~~~~--------~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (557)
+|||||+.+.+.+..+.+.. ..+...++.. ....|.....+. +.. . ..+.+.+
T Consensus 324 ~NLqDH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------~----~~~~~~~------ 386 (583)
T 3qvp_A 324 LNLQDQTTATVRSRITSAGAGQGQAAWFATFNETFGDYSEKAHELLNTKLEQ-WAE------E----AVARGGF------ 386 (583)
T ss_dssp CCBBCCEEEEEEEEECGGGCSBCEEEEEEEHHHHHGGGHHHHHHHHHHCHHH-HHH------H----HHHTTSC------
T ss_pred cchhhCccceEEEEecCCccccccccccccHHHhhccchHHHHHHHHhhcch-hhc------c----cccccCc------
Confidence 99999999888776653210 0111111100 000111100000 000 0 0000000
Q ss_pred CCCHHHHHHHHhh-----h-ccCCCC-----CccceEEEEeecccCcceEEEeccCCCCCCCeE-ecCCCCCHHHHHHHH
Q 008675 362 QRTPEAIAEAIEN-----M-KALDDP-----AFRGGFILEKVMGPVSTGHLELRTRNPNDNPSV-TFNYFKEPEDLQRCV 429 (557)
Q Consensus 362 ~~~~~~~~~~~~~-----~-~~~~~~-----~~~~~~~~~~~~~p~s~g~V~l~~~d~~~~p~i-~~~~~~~~~D~~~~~ 429 (557)
.....+...+.. . ...+.. ......+....++|.|||+|+|+++||++.|+| +++|+.+|.|++.+.
T Consensus 387 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~SrG~v~l~s~dp~~~P~i~~~~yl~~~~D~~~~~ 465 (583)
T 3qvp_A 387 -HNTTALLIQYENYRDWIVNHNVAYSELFLDTAGVASFDVWDLLPFTRGYVHILDKDPYLHHFAYDPQYFLNELDLLGQA 465 (583)
T ss_dssp -SCHHHHHHHHHHHHHHHHHSCCEEEEEEEECTTSEEEEEEESSCCCCBEEEESSSCGGGCCEEEECCTTCSHHHHHHHH
T ss_pred -cccHHHHhhhccchhhhccCCCCcceeeeccCCCceeeeeecccCCceEEEecCCCCCCCcccccCCCCCCHHHHHHHH
Confidence 000011111000 0 000000 001122333347999999999999999999999 999999999999999
Q ss_pred HHHHHHHHHHccccccccccccCcchhhhccccCCCCCCCCCCCCChHHHHHHHHhccccccccccccccC-----cccC
Q 008675 430 QGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG-----KVVD 504 (557)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~H~~GT~rMG-----~VVD 504 (557)
++++.+++++++.+++.+...+.. |..-. ....+|++|++|+|....+.+|++|||||| +|||
T Consensus 466 ~~~~~~~~i~~~~~~~~~~~~~~~-----------pg~~~-~~~~sd~~~~~~~r~~~~t~~H~~GTc~Mg~~~~~~VVD 533 (583)
T 3qvp_A 466 AATQLARNISNSGAMQTYFAGETI-----------PGDNL-AYDADLSAWTEYIPYHFRPNYHGVGTCSMMPKEMGGVVD 533 (583)
T ss_dssp HHHHHHHHHHTSTTHHHHEEEEEE-----------SGGGS-CTTCCHHHHHHHGGGSCEECSCCBCTTCBSCGGGTCSBC
T ss_pred HHHHHHHHHHhCcchhhccccccC-----------CCccc-ccCCCHHHHHHHHHhccCCCcCCCCceeCCCCCCCceEC
Confidence 999999999999888876643311 00000 123689999999999999999999999999 7999
Q ss_pred CCCeEeccCCceEeeccCCCCCCCCChHHHHHHHHHHHHHHHHHhhhhcc
Q 008675 505 HDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSERLASN 554 (557)
Q Consensus 505 ~~~rV~g~~nL~V~DaSv~P~~~~~np~lTi~ala~r~a~~i~~~~~~~~ 554 (557)
++|||||++|||||||||||+++++||++|+||||||+||+|+++ +.++
T Consensus 534 ~~lrV~Gv~~LrVvDaSv~P~~~~~n~~~t~~aiaeraAd~I~~~-~~~~ 582 (583)
T 3qvp_A 534 NAARVYGVQGLRVIDGSIPPTQMSSHVMTVFYAMALKISDAILED-YASM 582 (583)
T ss_dssp TTCBBTTCBSEEECSTTCCSSCCSSCSHHHHHHHHHHHHHHHHHH-HHHC
T ss_pred CCCeEecCCCeEEeecccCCCCCCcCcHHHHHHHHHHHHHHHHHh-hhhc
Confidence 999999999999999999999999999999999999999966655 4444
No 4
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=100.00 E-value=1.2e-76 Score=634.45 Aligned_cols=484 Identities=21% Similarity=0.270 Sum_probs=341.2
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-C-CeEEEEeeCCCC-CCCCCccchhhhhhcc---CCCCCCCcCccccCCCccc--
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQ-N-ASVLLLERGGSP-YGNPNITNLGSFGAAL---SDLSSTSPSQRFISEDGVI-- 101 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Lae-g-~~VlvLE~G~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-- 101 (557)
..+|||||||||+|||++|.||+| + .+|||||+|+.. ...+.+..|..+.... .+|.|.+. +.++...
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~~~~~~~~i~~P~~~~~~~~~~~dW~y~t~----~~~r~~~~~ 79 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIGNPEDIPEITTPSSAMDLRNSKYDWAYKTT----MVRRDDYER 79 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCSCGGGCHHHHCGGGGGGGTTSTTBCCEEEE----EEEETTEEE
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCceEECchhhhhccCCCcccceEEE----ECCcccccc
Confidence 457999999999999999999999 5 799999999863 2223333444333322 25665544 3344444
Q ss_pred ----ccCcceecccccccCceeecCCcchhcc------CCCChhhhhhhhhhhhhhhccC----------C---------
Q 008675 102 ----NSRARVLGGGSCLNAGFYTRAAPYYVRE------VGWDERLVNESYQWVEKVVAFE----------P--------- 152 (557)
Q Consensus 102 ----~~~g~~lGG~s~~n~~~~~r~~~~~~~~------~gw~~~~~~~~~~~~e~~~~~~----------~--------- 152 (557)
++||++|||+|++|+|+|.|+.+.+++. .+|+|+++.|||++.|...... .
T Consensus 80 ~~~~~~rGkvLGGsS~iN~m~~~rg~~~dyd~W~~~G~~gW~~~~~lpyf~k~e~~~~~~~~~~~~~~~hG~~Gpl~v~~ 159 (577)
T 3q9t_A 80 IEKPNTRGKTLGGSSSLNYFTWVPGHKATFDQWEEFGGKEWTWDPLVPYLRKSATYHDDPRLYSPELEKIGGGGPIPISH 159 (577)
T ss_dssp EEEEECCBCSTTGGGGTSCCEECCCCHHHHHTTHHHHCGGGSHHHHHHHHHHTEEEECTTCCSCGGGGGGCCSCSEEEEE
T ss_pred ccccccccccccCccccCceEeccCCHHHHHHHHHhCCCCCCHHHHHHHHHHHhccCCCccccCCccccCCCCCCEEeeC
Confidence 8999999999999999999999976653 5799999999999988643211 0
Q ss_pred -CC----CchhHHHHHHHHHcCCCCCCCCCcCCCCceeeeeeEE---CCCCccccHHHhhhhcCCCCcEEEcCcEEEEEE
Q 008675 153 -PM----RQWQSAVRDGLVEVGVLPYNGFTYDHMYGTKIGGTIF---DQNGQRHTAADLLEYANPSGLTLLLHASVHKVL 224 (557)
Q Consensus 153 -~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~g~r~~~~~~l~~~~~~n~~i~~~~~V~~i~ 224 (557)
.. .++.+.+.++++++|++...++ ..+...|...+ ..+|.|+++..+ ...++|++|++++.|+||+
T Consensus 160 ~~~~~~~~~~~~~~~~a~~~~G~~~~~d~----n~~~~~G~~~~~~~~~~g~R~s~~~~--l~~r~Nl~v~~~a~v~ri~ 233 (577)
T 3q9t_A 160 AELIDEMAPFRENLTKAWKSMGQPLIENI----YDGEMDGLTHCCDTIYRGQRSGSFLF--VKNKPNITIVPEVHSKRLI 233 (577)
T ss_dssp CCCCGGGHHHHHHHHHHHHHTTCCBCSCC----SSSCCCEEEECEESEETTEECCGGGG--SSSCTTEEEECSEEEEEEE
T ss_pred CCCCcccchHHHHHHHHHHHcCCCcCCCC----CCCCcCeEEeecceecCCeEeeHHHH--HhcCCCeEEEcCcEEEEEE
Confidence 00 1245667788899998643222 11222222111 146788876544 3568899999999999999
Q ss_pred EecCCCCCCeEEEEEEEeCCCCeeEEeeecCCceEEEEccCCcCchHHHHhhc--------CCCcceeecCCccCCcCCC
Q 008675 225 FRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSD 296 (557)
Q Consensus 225 ~~~~~~~~~~~~gV~~~~~~g~~~~v~~~~~aa~~VIlaaGa~~sp~lLl~Sg--------~~gi~~~~~~p~VG~nl~d 296 (557)
+++.+ .+|+||++.+.+|+.++++ ++|+||||||+|+||+|||+|| ++|||++.|+|+||+||||
T Consensus 234 ~~~~~---~~a~GV~~~~~~g~~~~v~----A~keVILsaGa~~sp~lL~~SGIGp~~~L~~~GI~vv~dlP~VG~nl~D 306 (577)
T 3q9t_A 234 INEAD---RTCKGVTVVTAAGNELNFF----ADREVILSQGVFETPKLLMLSGIGPTRELSRHGINTIVDSRHVGQNLMD 306 (577)
T ss_dssp EETTT---TEEEEEEEEETTSCEEEEE----EEEEEEECSHHHHHHHHHHHTTEECHHHHHTTTCCCSEECTTTTEEEBC
T ss_pred EeCCC---CEEEEEEEEeCCCcEEEEE----eeeEEEEcccccCChHHHHHcCCCCHHHHHHcCCCeeccCchhhhhhhc
Confidence 98421 2999999997568777776 5699999999999999999999 9999999999999999999
Q ss_pred CCCceEEeeCCCcccch-h-HH--HhhccchhhhhhhccCCcccCCCCCCCCcccccccc--c-------------cccc
Q 008675 297 NPMNAIFVPSPVPVEVS-L-IQ--VVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKI--G-------------QLSK 357 (557)
Q Consensus 297 H~~~~~~~~~~~~~~~~-~-~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~-------------~~~~ 357 (557)
|+.+.+.+..+.+.... . .. .........|.....|+.-. . .....++..... . ....
T Consensus 307 H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~Gpl~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (577)
T 3q9t_A 307 HPGVPFVLRVKDGFGMDDVLLRHGPKRDAVVSAYNKNRSGPVGS-G--LLELVGFPRIDKYLEKDAEYRKAKAANGGKDP 383 (577)
T ss_dssp CEEEEEEEEECTTSSSHHHHTSCSHHHHHHHHHHHHHSCSGGGC-C--SEEEEEECCCHHHHTTCHHHHHHHHHTTTSCS
T ss_pred CcceeEEEEeCCCCccchhhhcchhHHHHHHHHHHhcCCCCccc-c--hhheeEEeecChhhhcchhhhhhhhccccccc
Confidence 99988877766542110 0 00 00001122344444443110 0 000000000000 0 0000
Q ss_pred -CCCCCCCHHH--HHHHHhhhc-cCCC-CCccceEEEEeecccCcce-EEEeccCCCCCCCeEecCCCCCHHHHHHHHHH
Q 008675 358 -VPPKQRTPEA--IAEAIENMK-ALDD-PAFRGGFILEKVMGPVSTG-HLELRTRNPNDNPSVTFNYFKEPEDLQRCVQG 431 (557)
Q Consensus 358 -~~~~~~~~~~--~~~~~~~~~-~~~~-~~~~~~~~~~~~~~p~s~g-~V~l~~~d~~~~p~i~~~~~~~~~D~~~~~~~ 431 (557)
.+......++ ...+..... ..+. .....+++...+++|.||| +|+|+|+||++.|+|+++|+.+|.|++.++++
T Consensus 384 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~SrGG~V~L~S~dp~~~P~i~p~yl~~~~D~~~~~~~ 463 (577)
T 3q9t_A 384 FSPLGQPHFELDFVCMFGTAFQWHFPTPKTGDHLTVVVDLVRPISDPGEVTLNSADPFQQPNINLNFFANDLDIIAMREG 463 (577)
T ss_dssp SCTTSCCSEEEEEESSCCGGGCSSSCCCSSSEEEEEEEEESSCCSCCEEEECSCSCTTSCCEEECCTTCSHHHHHHHHHH
T ss_pred cCCCCCceEEEEecccccccccccccCCCCCCEEEEEEEeeeccccCCEEEeCCCCCCCCceEecCcCCCccHHHHHHHH
Confidence 0000000000 000000000 0000 1112456667789999999 99999999999999999999999999999999
Q ss_pred HHHHHHHH-ccccccccccccCcchhhhccccCCCCCCCC-CCCCChHHHHHHHHhccccccccccccccC-----cccC
Q 008675 432 ISTIEKII-ESKSFSKFKYESMSVPILVNMTASAPVNLLP-RHSNASTSLEQFCRDTVMTIWHYHGGCQVG-----KVVD 504 (557)
Q Consensus 432 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~H~~GT~rMG-----~VVD 504 (557)
++.+++++ ++++++.+...+. .| ...++|++|++|+|+...+.+|++|||||| +|||
T Consensus 464 ~~~~~~i~~~~~~~~~~~~~e~----------------~p~~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~~~VVD 527 (577)
T 3q9t_A 464 IRFSYDLLFKGEGFKDLVESEY----------------PWEMPLDSDKEMHRAVLDRCQTAFHPTGTARLSKNIDQGVVD 527 (577)
T ss_dssp HHHHHHHHHHSTTGGGTEEEEE----------------SSCCCTTCHHHHHHHHHHHCEECSCCBCTTCBCSSTTTCSBC
T ss_pred HHHHHHHHHhChhhhhcccccc----------------CCCCCcCCHHHHHHHHHhccccccccccceecCCCCCCceEC
Confidence 99999999 8888888765442 12 245789999999999999999999999999 6999
Q ss_pred CCCeEeccCCceEeeccCCCCCCCCChHHHHHHHHHHHHHHHHHh
Q 008675 505 HDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSE 549 (557)
Q Consensus 505 ~~~rV~g~~nL~V~DaSv~P~~~~~np~lTi~ala~r~a~~i~~~ 549 (557)
++|||||++|||||||||||+++++||++|+||||||+||.|+++
T Consensus 528 ~~lrV~Gv~~LrVvDaSv~P~~~~~n~~a~~~~iaekaAd~I~~~ 572 (577)
T 3q9t_A 528 PKLKVHGIKKLRVADASVIPIIPDCRIQNSVYAVGEKCADMIKAE 572 (577)
T ss_dssp TTCBBTTCBSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEeCCCCcEEeecccccCCCCCccHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999977655
No 5
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=100.00 E-value=3.4e-74 Score=618.61 Aligned_cols=464 Identities=24% Similarity=0.357 Sum_probs=338.5
Q ss_pred CCCCCccEEEECCCcchHHHHHhhhc--CCeEEEEeeCCCCCCCCCccchhhhhhcc---CCCCCCCcCccccCCCcccc
Q 008675 28 QPVSYYDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSPYGNPNITNLGSFGAAL---SDLSSTSPSQRFISEDGVIN 102 (557)
Q Consensus 28 ~~~~~~DvIIVGsG~aG~~~A~~Lae--g~~VlvLE~G~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 102 (557)
+...+|||||||||+|||++|.||+| +.||||||+|+... .+.+..|..+.... .+|.|.+.+|..+.++.+.+
T Consensus 13 ~~~~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~~~-~~~~~~p~~~~~~~~~~~dw~~~t~p~~~~~~~~~~~ 91 (526)
T 3t37_A 13 EHAPNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEEPT-DPDIWNPAAWPALQGRSYDWDYRTEAQAGTAGRAHHW 91 (526)
T ss_dssp ----CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBCCC-CGGGGSGGGGGGTTTSTTBCCEECCCBGGGTTBCCEE
T ss_pred cCCCCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCCCC-CcchhChhhHhhccCCccccCccccccCCCCCCeEec
Confidence 33458999999999999999999998 68999999998643 23344444443222 26788888999999999999
Q ss_pred cCcceecccccccCceeecCCcchhcc-------CCCChhhhhhhhhhhhhhhccCC----------------CCCchhH
Q 008675 103 SRARVLGGGSCLNAGFYTRAAPYYVRE-------VGWDERLVNESYQWVEKVVAFEP----------------PMRQWQS 159 (557)
Q Consensus 103 ~~g~~lGG~s~~n~~~~~r~~~~~~~~-------~gw~~~~~~~~~~~~e~~~~~~~----------------~~~~~~~ 159 (557)
.+|++|||+|++|+|.|.|+.+.+|+. ++|+|+++.|||++.|....... ...++.+
T Consensus 92 ~rG~~lGGsS~in~~~~~R~~~~Dfd~w~~~~~~~~w~~~~~~pyf~~~E~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~ 171 (526)
T 3t37_A 92 ARGRLIGGSSCLHAMGYMRGHPSDFQAWVDASGDRRWGWDELLPVFQAIEDHPLGGDGIHGKGGPLPIHLPADEVSPLAR 171 (526)
T ss_dssp CCBCBTTGGGGTSCCBCCCCCHHHHHHHHHHHSCGGGSHHHHHHHHHHHEECTTTTSSSSCSSCSEECBCCSTTSCHHHH
T ss_pred cCccEECcHHHHhhCEEecCCHHHHHHHHHhcCCCCCChhhhhhhhhhhhhccCCCccccCcCCCcCcccccccCCHHHH
Confidence 999999999999999999999977652 57999999999999997543211 1234567
Q ss_pred HHHHHHHHcCCCCCCCCCcCCCCceeeeeeEECCCCccccHHH-hh-h-hcCCCCcEEEcCcEEEEEEEecCCCCCCeEE
Q 008675 160 AVRDGLVEVGVLPYNGFTYDHMYGTKIGGTIFDQNGQRHTAAD-LL-E-YANPSGLTLLLHASVHKVLFRIKGKARPVAH 236 (557)
Q Consensus 160 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~r~~~~~-~l-~-~~~~~n~~i~~~~~V~~i~~~~~~~~~~~~~ 236 (557)
.+.+++.++|++...........++... ..+...|.|.+... ++ + ...++|++|++++.|++|+++++ +++
T Consensus 172 ~~~~~~~~~G~~~~~~~~~~~~~~~~~~-~~~~~~g~r~s~~~~~~~~~~~~r~nl~v~~~~~v~~i~~~~~-----~a~ 245 (526)
T 3t37_A 172 AFIEAGASLGLPRLEGHNSGEMIGVTPN-SLNIRDGRRVTAADAWLTKAVRGRKNLTILTGSRVRRLKLEGN-----QVR 245 (526)
T ss_dssp HHHHHHHHTTCCBCSSSCSSCCBSBCCC-CBCEETTEECCHHHHHSCHHHHTCTTEEEECSCEEEEEEEETT-----EEE
T ss_pred HHHHHHHHcCCCcccCCCCCcccccccc-cccccCCcccccccccccccccCCCCeEEEeCCEEEEEEecCC-----eEE
Confidence 7888999999875433221111121111 11123566766654 44 3 45789999999999999999887 999
Q ss_pred EEEEEeCCCCeeEEeeecCCceEEEEccCCcCchHHHHhhc--------CCCcceeecCCccCCcCCCCCCceEEe-eCC
Q 008675 237 GVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSDNPMNAIFV-PSP 307 (557)
Q Consensus 237 gV~~~~~~g~~~~v~~~~~aa~~VIlaaGa~~sp~lLl~Sg--------~~gi~~~~~~p~VG~nl~dH~~~~~~~-~~~ 307 (557)
||++.+. +...++. +|+||||||+|+||+|||+|| ++||+++.++|+||+|||||+.....+ ...
T Consensus 246 gv~~~~~-~~~~~~~-----a~~VILsAGai~SP~LLl~SGig~~~~l~~~gi~vv~dlp~VG~nl~DH~~~~~~~~~~~ 319 (526)
T 3t37_A 246 SLEVVGR-QGSAEVF-----ADQIVLCAGALESPALLMRSGIGPHDVLDAAGVGCLIDMPDIGRNLQDHLLGAGNLYAAR 319 (526)
T ss_dssp EEEEEET-TEEEEEE-----EEEEEECSHHHHHHHHHHHTTEECHHHHHHHTCCCSEECTTTTCSBBCCEEEEEEEEEES
T ss_pred EEEEEec-CceEEEe-----ecceEEcccccCCcchhhhccCCchhhhhccCCCeEecCCccccccccccccceeEEecc
Confidence 9999864 4445554 799999999999999999999 789999999999999999999655432 222
Q ss_pred CcccchhHHHhhccchhhhhhhccCCcccCCCCCCCCcccccccccccccCCCCCCCHHHHHHHHhhhccCCC-CCccce
Q 008675 308 VPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDD-PAFRGG 386 (557)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 386 (557)
.+....... .... ..+... +. +.........++. +...... ...+. ......
T Consensus 320 ~~~~~~~~~--~~~~-~~~~~~--~~-~~~~~~~~~~~~~-----~~~~~~~----------------~~~~~~~~~~~~ 372 (526)
T 3t37_A 320 KPVPPSRLQ--HSES-MAYMRA--DS-FTAAGQPEIVVGC-----GVAPIVS----------------ESFPAPAAGSAY 372 (526)
T ss_dssp SCCCCCSSC--SEEE-EEEECS--SC-SSCCSSCCEEEEE-----ESSCCCC----------------TTSCCCCTTSEE
T ss_pred CCcchHhhc--chhh-hhhhhc--cc-ccccCCcceeeec-----ccccccc----------------cccccccCCcce
Confidence 222111000 0000 001100 00 0000000000000 0000000 00000 111234
Q ss_pred EEEEeecccCcceEEEeccCCCCCCCeEecCCCCCHHHHHHHHHHHHHHHHHHccccccccccccCcchhhhccccCCCC
Q 008675 387 FILEKVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPV 466 (557)
Q Consensus 387 ~~~~~~~~p~s~g~V~l~~~d~~~~p~i~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (557)
.+...+.+|.|||+|+++++|+.+.|.|+++|+.++.|++.++++++.+++++.+..++.+...+
T Consensus 373 ~~~~~l~~p~srG~v~~~s~dp~~~p~i~~~~~~~~~d~~~~~~~~~~~r~i~~~~~~~~~~~~~--------------- 437 (526)
T 3t37_A 373 SLLFGITHPTSRGSVRISGPELGDRLIIDPAYLQTGRDRERFRRALEASRTIGHRDELAGWRERE--------------- 437 (526)
T ss_dssp EEEEEESSCCCCBEEECSSSSTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHTCGGGTTTEEEE---------------
T ss_pred eeeccccCccccCcceeccCCCccCceeccccCCCHHHHHHHHHHHHHHHHHHcChhhhhccccc---------------
Confidence 55566789999999999999999999999999999999999999999999999988887766544
Q ss_pred CCCCCCCCChHHHHHHHHhccccccccccccccC----cccCCCCeEeccCCceEeeccCCCCCCCCChHHHHHHHHHHH
Q 008675 467 NLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG----KVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYM 542 (557)
Q Consensus 467 ~~~p~~~~~~~~~~~~~~~~~~~~~H~~GT~rMG----~VVD~~~rV~g~~nL~V~DaSv~P~~~~~np~lTi~ala~r~ 542 (557)
..|....+++++++|++....+.+|++|||||| +|||++|||||++|||||||||||+++++||++||||||||+
T Consensus 438 -~~pg~~~~~~~~~~~ir~~~~t~~H~~GTcrMG~d~~sVVD~~~rV~Gv~nL~VvDaSv~P~~~~~np~~ti~aiAEka 516 (526)
T 3t37_A 438 -LLPGTPNSAAEMDDFIARSVITHHHPCGTCRMGKDPDAVVDANLRLKALDNLFVVDASIMPNLTAGPIHAAVLAIAETF 516 (526)
T ss_dssp -CSSCCCCSHHHHHHHHHHHEEECSCCBCTTCBCSSTTCSBCTTCBBTTCSSEEECSGGGCSSCCSSCCHHHHHHHHHHH
T ss_pred -cCCCCCCCHHHHHHHHHhcCccCcccCccccCCCCCCccCCCCCEEcCCCCeEEEEcCcccCCcChHHHHHHHHHHHHH
Confidence 344445788999999999999999999999999 699999999999999999999999999999999999999999
Q ss_pred HHHHH
Q 008675 543 GVRIL 547 (557)
Q Consensus 543 a~~i~ 547 (557)
||+.-
T Consensus 517 Ad~~~ 521 (526)
T 3t37_A 517 ARQYH 521 (526)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 99764
No 6
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=100.00 E-value=3e-74 Score=621.20 Aligned_cols=495 Identities=21% Similarity=0.234 Sum_probs=346.6
Q ss_pred CCCccEEEECCCcchHHHHHhhhc--CCeEEEEeeCCCCCCCCCcc-chhhhhhcc---CCCCCCCcCccccCCCccccc
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSPYGNPNIT-NLGSFGAAL---SDLSSTSPSQRFISEDGVINS 103 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Lae--g~~VlvLE~G~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 103 (557)
+.+|||||||+|++|+++|.+|++ |.+|+|||+|......+... .|..+...+ .+|.+.+.+ .+.++.+.+.
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~p--~~~~~~~~~~ 99 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPNAYGQIFGTTVDQNYLTVP--LINNRTNNIK 99 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCCTTSCHHHHCGGGTTTTTTSTTBCCEECCC--CTTSCCCEEC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCccCCCcccccChhhHhhccCCcccccccccc--CCCCceeeee
Confidence 467999999999999999999999 79999999998664333333 333332222 246665544 4567888999
Q ss_pred CcceecccccccCceeecCCcchhcc-------CCCChhhhhhhhhhhhhhhcc-----------C--------C-----
Q 008675 104 RARVLGGGSCLNAGFYTRAAPYYVRE-------VGWDERLVNESYQWVEKVVAF-----------E--------P----- 152 (557)
Q Consensus 104 ~g~~lGG~s~~n~~~~~r~~~~~~~~-------~gw~~~~~~~~~~~~e~~~~~-----------~--------~----- 152 (557)
+|++|||+|++|+|.|.|+++.+|+. .||+|++++|||+++|+.+.. . |
T Consensus 100 rGk~lGGsS~in~~~~~R~~~~D~d~W~~~~G~~gW~~~~l~pyf~k~E~~~~~~~~~~~~G~~~~~~~~g~~Gpl~v~~ 179 (587)
T 1gpe_A 100 AGKGLGGSTLINGDSWTRPDKVQIDSWEKVFGMEGWNWDNMFEYMKKAEAARTPTAAQLAAGHSFNATCHGTNGTVQSGA 179 (587)
T ss_dssp CBCSTTGGGGTSCCEECCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHTEEECCCCHHHHHHTCCCCGGGCCBSSSEEEBC
T ss_pred ccccccccccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhcccCCcccccccccccCccccCCCCCEEEcc
Confidence 99999999999999999999976543 479999999999999986532 0 0
Q ss_pred -----CCCchhHHHHHHHHHcCCCCCCCCCcCCCCceeeeeeEECCCCccccHHH-hhh-hcCCCCcEEEcCcEEEEEEE
Q 008675 153 -----PMRQWQSAVRDGLVEVGVLPYNGFTYDHMYGTKIGGTIFDQNGQRHTAAD-LLE-YANPSGLTLLLHASVHKVLF 225 (557)
Q Consensus 153 -----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~r~~~~~-~l~-~~~~~n~~i~~~~~V~~i~~ 225 (557)
...+..+.+.++++++|++....+......|+......++.+|.|+++.. |+. .++++|++|++++.|++|++
T Consensus 180 ~~~~~~~~~~~~~~~~a~~~~G~~~~~d~n~~~~~G~~~~~~~~~~~g~R~sa~~~~l~~~~~~~nl~i~~~~~v~~l~~ 259 (587)
T 1gpe_A 180 RDNGQPWSPIMKALMNTVSALGVPVQQDFLCGHPRGVSMIMNNLDENQVRVDAARAWLLPNYQRSNLEILTGQMVGKVLF 259 (587)
T ss_dssp CCCSSCBCTHHHHHHHHHHHTTCCBSCCTTSSCCCEEECCEESBCTTCCBCCHHHHHTTTTTTCTTEEEEESCEEEEEEE
T ss_pred CCCcCCCCHHHHHHHHHHHHcCCCcCCCCCCCCCCEEEecceEECCCCcccCHHHHHHHHhhcCCCcEEEcCCEEEEEEE
Confidence 12345678899999999875433221112232221111124688998865 774 66789999999999999999
Q ss_pred ecCCCCCCeEEEEEEEeCCCCeeEEeeecCCceEEEEccCCcCchHHHHhhc--------CCCcceeecCCccCCcCCCC
Q 008675 226 RIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSDN 297 (557)
Q Consensus 226 ~~~~~~~~~~~gV~~~~~~g~~~~v~~~~~aa~~VIlaaGa~~sp~lLl~Sg--------~~gi~~~~~~p~VG~nl~dH 297 (557)
++++ .+.+|+||++.+.+|+.+++. ++|+||||||+|+||+|||+|| ++||+++.|+| ||+|||||
T Consensus 260 ~~~~-~~~~~~GV~~~~~~g~~~~v~----A~k~VILaaG~~~sp~lL~~SGIGp~~~L~~~gI~vv~dlP-VG~nL~DH 333 (587)
T 1gpe_A 260 KQTA-SGPQAVGVNFGTNKAVNFDVF----AKHEVLLAAGSAISPLILEYSGIGLKSVLDQANVTQLLDLP-VGINMQDQ 333 (587)
T ss_dssp EEET-TEEEEEEEEEEEETTEEEEEE----EEEEEEECSCTTTHHHHHHHTTEECHHHHHHTTCCCSEECC-TTCSBBCC
T ss_pred CCCC-CCCEEEEEEEEeCCCcEEEEE----ecccEEEccCCCCCHHHHHhCCCCCHHHHHhCCCCeEEeCC-CCcchhcC
Confidence 8631 112899999986578777776 4599999999999999999999 89999999999 99999999
Q ss_pred CCceEEeeCCCcccchhHHHhhcc-chhhhhhhccCCcccCCCCCCCCcccccccccccccCCCCCC--CHHHHHHHHhh
Q 008675 298 PMNAIFVPSPVPVEVSLIQVVGIT-QFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQR--TPEAIAEAIEN 374 (557)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 374 (557)
+...+.+.++.+... ........ ....|.....|+.-.. ......+...... ........ .++ ++..+..
T Consensus 334 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~G~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~ 406 (587)
T 1gpe_A 334 TTTTVSSRASSAGAG-QGQAVFFANFTETFGDYAPQARDLL----NTKLDQWAEETVA-RGGFHNVTALKVQ-YENYRNW 406 (587)
T ss_dssp EEEEEEEEECGGGCS-BCEEEEEEEHHHHHGGGHHHHHHHH----HHSHHHHHHHHHH-TTSCSCHHHHHHH-HHHHHHH
T ss_pred cccceEEEeCCCccc-ccchHHHHHHHHHHHhCCCCCcccc----ccceeeEeecccc-ccccccccccccc-HHHHhhh
Confidence 998887766543210 00000000 0011221111110000 0000000000000 00000000 011 1111111
Q ss_pred h-c-cCCC-----CCccceEEEEeecccCcceEEEeccCCCCCCC-eEecCCCCCHHHHHHHHHHHHHHHHHHccccccc
Q 008675 375 M-K-ALDD-----PAFRGGFILEKVMGPVSTGHLELRTRNPNDNP-SVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSK 446 (557)
Q Consensus 375 ~-~-~~~~-----~~~~~~~~~~~~~~p~s~g~V~l~~~d~~~~p-~i~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 446 (557)
+ . ..+. .......+...+++|.|||+|+|+++||++.| +|+++|+.++.|++.+.++++.+++++++.+++.
T Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~srG~V~L~s~dp~~~P~~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~ 486 (587)
T 1gpe_A 407 LLDEDVAFAELFMDTEGKINFDLWDLIPFTRGSVHILSSDPYLWQFANDPKFFLNEFDLLGQAAASKLARDLTSQGAMKE 486 (587)
T ss_dssp HHHSCCEEEEEEEECTTEEEEEEEESSCCCCBEEEESSSCGGGTCEEEECCTTSSHHHHHHHHHHHHHHHHHHTSTTHHH
T ss_pred ccCCCCcceeeeecCCCcEEEEEEecCCccceeEEeCCCCcccCccEeecccCCChHHHHHHHHHHHHHHHHHcCcchhh
Confidence 0 0 0100 00112345566789999999999999999999 9999999999999999999999999999998887
Q ss_pred cccccCcchhhhccccCCCCCCCCCCCCChHHHHHHHHhccccccccccccccC-----cccCCCCeEeccCCceEeecc
Q 008675 447 FKYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG-----KVVDHDYKVLGVDALRVIDGS 521 (557)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~H~~GT~rMG-----~VVD~~~rV~g~~nL~V~DaS 521 (557)
+...+.. |..-. ....++++|++|++....+.+|++|||||| +|||++|||||++||||||||
T Consensus 487 ~~~~~~~-----------pg~~~-~~~~sd~~~~~~ir~~~~t~~H~~GTcrMG~~~~~sVVD~~lrV~Gv~nLrVvDaS 554 (587)
T 1gpe_A 487 YFAGETL-----------PGYNL-VQNATLSQWSDYVLQNFRPNWHAVSSCSMMSRELGGVVDATAKVYGTQGLRVIDGS 554 (587)
T ss_dssp HEEEEEE-----------SGGGS-CTTCCHHHHHHHHHHSCEECSCCBCTTCBSCGGGTCSBCTTCBBTTCBSEEECSTT
T ss_pred hcccccC-----------CCccc-cCCCCHHHHHHHHHHhcCcccCccCccccCCCCCCceECCCCEEECCCCcEEeeec
Confidence 6543310 00000 112688999999999999999999999999 599999999999999999999
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHhhh
Q 008675 522 TFYYSPGTNPQATVMMLGRYMGVRILSERL 551 (557)
Q Consensus 522 v~P~~~~~np~lTi~ala~r~a~~i~~~~~ 551 (557)
|||+++++||++|+||||||+||+|+++..
T Consensus 555 v~P~~~~~Np~~ti~aiAeraAd~I~~~~~ 584 (587)
T 1gpe_A 555 IPPTQVSSHVMTIFYGMALKVADAILDDYA 584 (587)
T ss_dssp CCSSCCSSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCcchHHHHHHHHHHHHHHHHhhhh
Confidence 999999999999999999999998877654
No 7
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=100.00 E-value=1.9e-71 Score=595.40 Aligned_cols=468 Identities=27% Similarity=0.404 Sum_probs=338.7
Q ss_pred CCccEEEECCCcchHHHHHhhhc--CCeEEEEeeCCCCCCCCCccchhhhhhcc---CCCCCCCcCccccCCCcccccCc
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSPYGNPNITNLGSFGAAL---SDLSSTSPSQRFISEDGVINSRA 105 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae--g~~VlvLE~G~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g 105 (557)
..|||||||+|++|+++|.+|++ |.+|+|||+|......+....+..+...+ .+|.+.+.++.. .++.+.+.+|
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~p~~~~~~~~~~~~w~~~~~p~~~-~~~~~~~~rG 90 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDRGVPEVLQLDRWMELLESGYDWDYPIEPQEN-GNSFMRHARA 90 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCTTCHHHHBGGGGGGGTTSTTBCCEEBCCCSS-SCTTCEECCB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCCCCccccChhhHHhhcCCcccccccccccCC-CCceEEeecc
Confidence 57999999999999999999999 68999999997653212222233332222 256666666666 6778889999
Q ss_pred ceecccccccCceeecCCcchhcc-------CCCChhhhhhhhhhhhhhhc------cC-----------CCCCchhHHH
Q 008675 106 RVLGGGSCLNAGFYTRAAPYYVRE-------VGWDERLVNESYQWVEKVVA------FE-----------PPMRQWQSAV 161 (557)
Q Consensus 106 ~~lGG~s~~n~~~~~r~~~~~~~~-------~gw~~~~~~~~~~~~e~~~~------~~-----------~~~~~~~~~~ 161 (557)
++|||+|.+|+|.|.|+.+.+|+. .+|+|+++.|||+++|+... +. +...+..+.+
T Consensus 91 k~lGGsS~in~~~~~R~~~~d~d~w~~~~G~~gW~~~~l~pyf~k~e~~~~~~~~~~~~g~~Gpl~v~~~~~~~~~~~~~ 170 (546)
T 2jbv_A 91 KVMGGCSSHNSCIAFWAPREDLDEWEAKYGATGWNAEAAWPLYKRLETNEDAGPDAPHHGDSGPVHLMNVPPKDPTGVAL 170 (546)
T ss_dssp CSTTGGGGTSCCBCCCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHHEEETTCBTTBTTSCBSCSEEEEECCSCCHHHHHH
T ss_pred cccccCccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhhccCCCCccccCCCCCCEEEecCCCCCHHHHHH
Confidence 999999999999999999865442 47999999999999997654 11 1123456788
Q ss_pred HHHHHHcCCCCCCCCCcCC--CCceeeeeeEECCCCccccHHH-hhhhc-CCCCcEEEcCcEEEEEEEecCCCCCCeEEE
Q 008675 162 RDGLVEVGVLPYNGFTYDH--MYGTKIGGTIFDQNGQRHTAAD-LLEYA-NPSGLTLLLHASVHKVLFRIKGKARPVAHG 237 (557)
Q Consensus 162 ~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~g~r~~~~~-~l~~~-~~~n~~i~~~~~V~~i~~~~~~~~~~~~~g 237 (557)
.++++++|++.. .+.... ..|+......|..+|.|+++.. |+..+ ++.|++|++++.|++|++++++ +++|
T Consensus 171 ~~a~~~~G~~~~-d~n~~~~~~~g~~~~~~~~~~~g~R~s~~~a~l~~a~~~~~~~i~~~~~V~~i~~~~~~----~~~G 245 (546)
T 2jbv_A 171 LDACEQAGIPRA-KFNTGTTVVNGANFFQINRRADGTRSSSSVSYIHPIVEQENFTLLTGLRARQLVFDADR----RCTG 245 (546)
T ss_dssp HHHHHHTTCCBC-CSSSSSCCSSEEEECEECBCTTSBBCCHHHHHTGGGTTCTTEEEECSCEEEEEEECTTS----BEEE
T ss_pred HHHHHHCCCCcc-CCCCCCcCcceEEeeeeecCCCCeEcCHHHHHHHHHhcCCCcEEEeCCEEEEEEECCCC----eEEE
Confidence 899999998754 322111 2233222111222788888765 77644 5789999999999999998732 8999
Q ss_pred EEEEeCC-CCeeEEeeecCCceEEEEccCCcCchHHHHhhc--------CCCcceeecCCccCCcCCCCCCceEEeeCCC
Q 008675 238 VVFRDAT-GAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSDNPMNAIFVPSPV 308 (557)
Q Consensus 238 V~~~~~~-g~~~~v~~~~~aa~~VIlaaGa~~sp~lLl~Sg--------~~gi~~~~~~p~VG~nl~dH~~~~~~~~~~~ 308 (557)
|++.+.. |+..++. +.|+||||||+++||+||++|| ++||+++.++|+||+|||||+...+.+.++.
T Consensus 246 V~~~~~~~g~~~~i~----A~k~VIlaaG~~~sp~lL~~SGiG~~~~L~~~gi~~~~dlP~VG~nL~dH~~~~~~~~~~~ 321 (546)
T 2jbv_A 246 VDIVDSAFGHTHRLT----ARNEVVLSTGAIDTPKLLMLSGIGPAAHLAEHGIEVLVDSPGVGEHLQDHPEGVVQFEAKQ 321 (546)
T ss_dssp EEEESSTTSCEEEEE----EEEEEEECSHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCCEECCEEEEESS
T ss_pred EEEEECCCCcEEEEE----eCccEEEecCccCCchhhhhcCCCchHHHHhcCCceEeeCcchhhhhhhCccceEEEEecC
Confidence 9998632 7666776 4459999999999999999999 7999999999999999999998887776554
Q ss_pred cccchhHHHhhccchhhhhhhccCCcccCCCCCCCCcccccccccccccCCCCCCCHHHHHHHHhhhccCCCCCccceEE
Q 008675 309 PVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFI 388 (557)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (557)
+..... ........|.....+. . .+..... ..+ ...... +... ... .......+
T Consensus 322 ~~~~~~---~~~~~~~~f~~~~~~~--~-----~p~~~~~--------~~~-~~~~~~-----~~~~-g~~-~~~~~~~~ 375 (546)
T 2jbv_A 322 PMVAES---TQWWEIGIFTPTEDGL--D-----RPDLMMH--------YGS-VPFDMN-----TLRH-GYP-TTENGFSL 375 (546)
T ss_dssp CCCSCC---SSSCCEEEEECSSTTC--S-----SCSEEEE--------EES-SCCCTT-----TGGG-TCC-CCSSEEEE
T ss_pred CCcccc---cchhheEEEEecCCCC--C-----CCceEEE--------ecc-cccccc-----cccc-Ccc-CCCCeEEE
Confidence 321000 0000001111100000 0 0000000 000 000000 0000 000 01123445
Q ss_pred EEeecccCcceEEEeccCCCCCCCeEecCCCCCHH--HHHHHHHHHHHHHHHHccccccccccccCcchhhhccccCCCC
Q 008675 389 LEKVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPE--DLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPV 466 (557)
Q Consensus 389 ~~~~~~p~s~g~V~l~~~d~~~~p~i~~~~~~~~~--D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (557)
...+++|.|||+|+|+++||++.|.|+++|+.++. |++.+.++++.+++++++.+++.+...+
T Consensus 376 ~~~~~~P~srG~V~L~s~dp~~~P~I~~~y~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~--------------- 440 (546)
T 2jbv_A 376 TPNVTHARSRGTVRLRSRDFRDKPMVDPRYFTDPEGHDMRVMVAGIRKAREIAAQPAMAEWTGRE--------------- 440 (546)
T ss_dssp EEEETTCCCCBEEECSSSCTTSCCEEECCTTCCTTCHHHHHHHHHHHHHHHHHTSGGGTTTEEEE---------------
T ss_pred EEEEcccCcccEEEecCCCCCCCceecccccCCCchhHHHHHHHHHHHHHHHHcCcchhhccccc---------------
Confidence 56678999999999999999999999999999999 9999999999999999999888765433
Q ss_pred CCCC-CCCCChHHHHHHHHhccccccccccccccC------cccCCCCeEeccCCceEeeccCCCCCCCCChHHHHHHHH
Q 008675 467 NLLP-RHSNASTSLEQFCRDTVMTIWHYHGGCQVG------KVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLG 539 (557)
Q Consensus 467 ~~~p-~~~~~~~~~~~~~~~~~~~~~H~~GT~rMG------~VVD~~~rV~g~~nL~V~DaSv~P~~~~~np~lTi~ala 539 (557)
..| ....++++|++|++....+.+|++|||||| +|||++|||||++|||||||||||+++++||++|+||||
T Consensus 441 -~~p~~~~~sd~~~~~~ir~~~~~~~H~~GTcrMG~~~d~~~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~ti~aiA 519 (546)
T 2jbv_A 441 -LSPGVEAQTDEELQDYIRKTHNTVYHPVGTVRMGAVEDEMSPLDPELRVKGVTGLRVADASVMPEHVTVNPNITVMMIG 519 (546)
T ss_dssp -EESCTTCCSHHHHHHHHHHHCEECSCCBCTTCBCCTTCTTCSBCTTCBBTTSBSEEECSGGGCSSCCSSCCHHHHHHHH
T ss_pred -ccCCCCCCCHHHHHHHHHhcCCcccccccccccCCCCCCCceECCCCEEECCCCeEEeecccCCCCCCcchHHHHHHHH
Confidence 112 234689999999999999999999999999 799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh
Q 008675 540 RYMGVRILSER 550 (557)
Q Consensus 540 ~r~a~~i~~~~ 550 (557)
+|+||+|+++.
T Consensus 520 eraAd~I~~~~ 530 (546)
T 2jbv_A 520 ERCADLIRSAR 530 (546)
T ss_dssp HHHHHHC----
T ss_pred HHHHHHHHhhc
Confidence 99999877654
No 8
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=100.00 E-value=1.5e-62 Score=529.00 Aligned_cols=467 Identities=22% Similarity=0.251 Sum_probs=305.2
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCCCCCCCc---------------cchhhhhhccCCCCCCCcCc
Q 008675 29 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYGNPNI---------------TNLGSFGAALSDLSSTSPSQ 92 (557)
Q Consensus 29 ~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~ 92 (557)
.+.+|||||||||++|+++|.+|++ |.+|||||+|......... ..+..+...+.+ ..
T Consensus 4 ~~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~------~~ 77 (546)
T 1kdg_A 4 SATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDIPGLFESLFTD------SN 77 (546)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCCSGGGTCCCCCGGGGGGTCCTTTCGGGGGGGGTC------SC
T ss_pred CCCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccccccccccceeeccchhHHHhhcC------CC
Confidence 3567999999999999999999999 9999999999754211000 000000000000 00
Q ss_pred cccCCCcccccCcceecccccccCceeecCCcchhcc---C--CCChhhhhhhhhhhhhhhccC--C------CCCchhH
Q 008675 93 RFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVRE---V--GWDERLVNESYQWVEKVVAFE--P------PMRQWQS 159 (557)
Q Consensus 93 ~~~~~~~~~~~~g~~lGG~s~~n~~~~~r~~~~~~~~---~--gw~~~~~~~~~~~~e~~~~~~--~------~~~~~~~ 159 (557)
...........+|++|||+|.+|+|.|.|+.+.+|+. + +|.|++ +||++.+...... + ...+...
T Consensus 78 ~~~~~~~~~~~~g~~lGGsS~in~~~~~r~~~~d~d~~~~W~~~w~~~~--p~~~k~e~~~~~~~~~~~~g~~~~~~~~~ 155 (546)
T 1kdg_A 78 PFWWCKDITVFAGCLVGGGTSVNGALYWYPNDGDFSSSVGWPSSWTNHA--PYTSKLSSRLPSTDHPSTDGQRYLEQSFN 155 (546)
T ss_dssp CTTBCTTBSSCCBCSTTGGGGTSCCBCCCCCGGGGCGGGTCCGGGSCCH--HHHHHHHHHSCCBSCCSTTSCCCSCHHHH
T ss_pred ccccccccccccceeecccccccceEEecCChHHhcCcccCccccCccc--HHHHHHHhcCCCCccCCCCCCccCCHHHH
Confidence 0011123456789999999999999999999877764 2 466666 9999988753211 1 1123446
Q ss_pred HHHHHHHHcCCCCCCCC-Cc-CCCCceeeeeeEECCCCccccHHH-hhh-hcCCCCcEEEcCcEEEEEEEecCCCCCCeE
Q 008675 160 AVRDGLVEVGVLPYNGF-TY-DHMYGTKIGGTIFDQNGQRHTAAD-LLE-YANPSGLTLLLHASVHKVLFRIKGKARPVA 235 (557)
Q Consensus 160 ~~~~~~~~~g~~~~~~~-~~-~~~~~~~~~~~~~~~~g~r~~~~~-~l~-~~~~~n~~i~~~~~V~~i~~~~~~~~~~~~ 235 (557)
.+.++++++|++..... .. ....++...... ..+|.|+++.. |+. ..+++|++|++++.|++|+++++ ++
T Consensus 156 ~~~~a~~~~G~~~~~~~~~~~~~~~g~~~~~~~-~~~g~R~s~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~-----~~ 229 (546)
T 1kdg_A 156 VVSQLLKGQGYNQATINDNPNYKDHVFGYSAFD-FLNGKRAGPVATYLQTALARPNFTFKTNVMVSNVVRNGS-----QI 229 (546)
T ss_dssp HHHHHHHTTTCEECCGGGSTTCCTTEEEECCBC-EETTEECHHHHTHHHHHHTCTTEEEECSCCEEEEEEETT-----EE
T ss_pred HHHHHHHHCCCCcCCccCCcCCCCcEEeeeeec-cCCCcccCHHHHHHHHHhhCCCcEEEeCCEEEEEEEeCC-----EE
Confidence 67888888887532100 00 011122111111 14688887754 776 44568999999999999999865 99
Q ss_pred EEEEEEeC-CCCee--EEeeecCCceEEEEccCCcCchHHHHhhc--------CC------Cccee-----ecCCccCCc
Q 008675 236 HGVVFRDA-TGAKH--RAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AH------NITVV-----LDQPLVGQG 293 (557)
Q Consensus 236 ~gV~~~~~-~g~~~--~v~~~~~aa~~VIlaaGa~~sp~lLl~Sg--------~~------gi~~~-----~~~p~VG~n 293 (557)
+||++.+. +|+.. ++. ++|+||||||+++||+||++|| ++ ||+++ .|+| ||+|
T Consensus 230 ~gV~~~~~~~g~~~~~~v~----~~~~VIlaaG~~~sp~lL~~sGig~~~~L~~~gn~s~~GI~v~~~~~~~dlp-VG~n 304 (546)
T 1kdg_A 230 LGVQTNDPTLGPNGFIPVT----PKGRVILSAGAFGTSRILFQSGIGPTDMIQTVQSNPTAAAALPPQNQWINLP-VGMN 304 (546)
T ss_dssp EEEEESCTTSSGGGEEEEE----EEEEEEECSHHHHHHHHHHHTTBSCHHHHHHHHTSHHHHHHSCCGGGCBCCC-TTTT
T ss_pred EEEEEEecCCCceeEEEEE----eCCEEEEcCChhcCHHHHHHcCCCcHHHHHHhhccccCCcccccccccccCC-cccC
Confidence 99999753 36532 343 5799999999999999999999 22 58874 7899 9999
Q ss_pred CCCCCCceEEeeCCCc-ccchhHHHh-h--ccchhhhhhhccCCcccCCCCCCCCccccccccc------cccc-CCCCC
Q 008675 294 MSDNPMNAIFVPSPVP-VEVSLIQVV-G--ITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIG------QLSK-VPPKQ 362 (557)
Q Consensus 294 l~dH~~~~~~~~~~~~-~~~~~~~~~-~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~-~~~~~ 362 (557)
||||+...+.+..+.. ........+ . ......|.....|+.... ....+++..... .+.. ..+..
T Consensus 305 L~DH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (546)
T 1kdg_A 305 AQDNPSINLVFTHPSIDAYENWADVWSNPRPADAAQYLANQSGVFAGA----SPKLNFWRAYSGSDGFTRYAQGTVRPGA 380 (546)
T ss_dssp BBCCCCEEEEEECTTCCCGGGGTTTTTSCCHHHHHHHHHHSCSGGGSC----SCCEEEEEEEECTTSCEEEEEEEEEESC
T ss_pred cccCcceeEEEecCCcccccchhhhhcchhHHHHHHHHHcCCcccccC----CcceEEEEccCCCCcchhhhhheecccc
Confidence 9999998877763221 000110000 0 001123333333321100 000011110000 0000 00000
Q ss_pred CCHHHHHHHHhhhccCCCCCccceEEEEeeccc-CcceEEEeccCCCCCCCeEecCCCCCHHHHHHHHHHHHHHHHHHcc
Q 008675 363 RTPEAIAEAIENMKALDDPAFRGGFILEKVMGP-VSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIES 441 (557)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~s~g~V~l~~~d~~~~p~i~~~~~~~~~D~~~~~~~~~~~~~~~~~ 441 (557)
.. .. ...+........+...+.+| .|||+|+|+++| ..|.|+++|+.++.|++.+.++++.+++++++
T Consensus 381 ~~-------~~--~~~~~~~~~~~~~~~~~~~p~~srG~v~L~s~~--~~~~i~~~y~~~~~D~~~~~~~~~~~~~~~~~ 449 (546)
T 1kdg_A 381 AS-------VN--SSLPYNASQIFTITVYLSTGIQSRGRIGIDAAL--RGTVLTPPWLVNPVDKTVLLQALHDVVSNIGS 449 (546)
T ss_dssp SC-------CC--CSSCCCGGGEEEEEEEECTTCCCCBEEEECTTC--CEEEEECCTTCSHHHHHHHHHHHHHHTTTGGG
T ss_pred cc-------cc--cccccCCCCeEEEEeeecCCCCCCceEecCCCC--CCCcccccccCCchHHHHHHHHHHHHHHHhcC
Confidence 00 00 00000011233455556788 999999999877 56778999999999999999999999999987
Q ss_pred ccccccccccCcchhhhccccCCCCCCCCCCCCChHHHHHHHHhccccccccccccccC-----cccCCCCeEeccCCce
Q 008675 442 KSFSKFKYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG-----KVVDHDYKVLGVDALR 516 (557)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~H~~GT~rMG-----~VVD~~~rV~g~~nL~ 516 (557)
.+...+. .|....+++++.+|++....+.+|++|||||| +|||++|||||++|||
T Consensus 450 ~~~~~~~--------------------~p~~~~~~~~~~~~~~~~~~t~~H~~GTcrMG~~~~~~VVD~~lrV~Gv~nLr 509 (546)
T 1kdg_A 450 IPGLTMI--------------------TPDVTQTLEEYVDAYDPATMNSNHWVSSTTIGSSPQSAVVDSNVKVFGTNNLF 509 (546)
T ss_dssp STTCEEE--------------------ESCTTSCHHHHHHHSCGGGGCCSCCBCTTCBCSCTTTCSBCTTCBBTTCSSEE
T ss_pred CCccccc--------------------CCCCCCCHHHHHHHHHHhcCcccccccceecCCCCCCeeECCCCeEccCCCcE
Confidence 6432211 12223578889999988888999999999999 6999999999999999
Q ss_pred EeeccCCCCCCCCChHHHHHHHHHHHHHHHHHh
Q 008675 517 VIDGSTFYYSPGTNPQATVMMLGRYMGVRILSE 549 (557)
Q Consensus 517 V~DaSv~P~~~~~np~lTi~ala~r~a~~i~~~ 549 (557)
||||||||+++++||++|+||||||+||+|+++
T Consensus 510 VvDaSv~P~~~~~np~~ti~aiAeraAd~I~~~ 542 (546)
T 1kdg_A 510 IVDAGIIPHLPTGNPQGTLMSAAEQAAAKILAL 542 (546)
T ss_dssp ECSGGGCSSCCSSCSHHHHHHHHHHHHHHHHHS
T ss_pred EeEecccCCCCCccHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999977665
No 9
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=100.00 E-value=1.2e-61 Score=515.56 Aligned_cols=440 Identities=18% Similarity=0.211 Sum_probs=296.3
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCCCC-CCCccchhhhh--hccCCCCCCCcCc--------------
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYG-NPNITNLGSFG--AALSDLSSTSPSQ-------------- 92 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~-------------- 92 (557)
.+||+||||+|++|+++|.+|++ |.+|+|||+|..... .+....+.... ....+|.+.+.++
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~t~p~~~~~~l~~~~~~~~ 83 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWNQPGPDGNIFCGMLNPDKRSSWFKNRTEAPLGSFLWLDVVNRN 83 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCCCCCTTSSSSCCTTSCCGGGSBSCSBCCCCTTCHHHHGGGCCB
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCCCCCcccccccccccCcccccccccccccccccccccccccc
Confidence 46999999999999999999999 999999999985431 22222221111 1112455544433
Q ss_pred --ccc------CCCcccccCcceecccccccCceeecCCcchhcc--CCCChhhhh-hhhhhhhhhhccCCCC-------
Q 008675 93 --RFI------SEDGVINSRARVLGGGSCLNAGFYTRAAPYYVRE--VGWDERLVN-ESYQWVEKVVAFEPPM------- 154 (557)
Q Consensus 93 --~~~------~~~~~~~~~g~~lGG~s~~n~~~~~r~~~~~~~~--~gw~~~~~~-~~~~~~e~~~~~~~~~------- 154 (557)
... .++.+.+.+|++|||+|.+|+|.|.|+.+.+|+. .+|.|++++ |||+++|+.+...+..
T Consensus 84 ~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~Dfd~w~~~w~~~~l~~pyy~~~E~~~~~~~~~~~~~~~~ 163 (504)
T 1n4w_A 84 IDPYAGVLDRVNYDQMSVYVGRGVGGGSLVNGGMAVEPKRSYFEEILPRVDSSEMYDRYFPRANSMLRVNHIDTKWFEDT 163 (504)
T ss_dssp CCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHCTTSCHHHHHHTHHHHHHHHHTCBCCCHHHHHHC
T ss_pred ccccccccceecCCceEEEEeeecchHHHhhCeEEEeCCHHHHHHhccccchhhhhhHHHHHHHHHhCCCCCCcccccCC
Confidence 222 4567788999999999999999999999988765 579999999 9999999977654321
Q ss_pred --CchhHHHHHHHHHcCCCC----CC-CCC------cCCCCceeeee-e-EECCCCccccHHH-hhh-hcCCCCcEEEcC
Q 008675 155 --RQWQSAVRDGLVEVGVLP----YN-GFT------YDHMYGTKIGG-T-IFDQNGQRHTAAD-LLE-YANPSGLTLLLH 217 (557)
Q Consensus 155 --~~~~~~~~~~~~~~g~~~----~~-~~~------~~~~~~~~~~~-~-~~~~~g~r~~~~~-~l~-~~~~~n~~i~~~ 217 (557)
.+..+.+.++++++|+++ .+ .+. ......|...+ + .-+.+| |+++.. |+. ..++.|++|+++
T Consensus 164 ~~~p~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~g~~~~~~~~G~c~~g~~~g-r~s~~~~~l~~a~~~~n~~i~~~ 242 (504)
T 1n4w_A 164 EWYKFARVSREQAGKAGLGTVFVPNVYDFGYMQREAAGEVPKSALATEVIYGNNHG-KQSLDKTYLAAALGTGKVTIQTL 242 (504)
T ss_dssp GGGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTSSCCSGGGTCSTTCCSSS-BCCTTTTHHHHHHHTTSEEEEES
T ss_pred CcchHHHHHHHHHHHcCCCCccCCcccccCccccccCccccCCcccccccccCCCC-ccCHHHHHHHHHHhcCCcEEEeC
Confidence 234567889999999842 11 100 00000111000 0 002467 887644 776 445678999999
Q ss_pred cEEEEEEEecCCCCCCeEEEEEEEeCCC---CeeEEeeecCCceEEEEccCCcCchHHHHhhc-CCCcceeecCCccCCc
Q 008675 218 ASVHKVLFRIKGKARPVAHGVVFRDATG---AKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG-AHNITVVLDQPLVGQG 293 (557)
Q Consensus 218 ~~V~~i~~~~~~~~~~~~~gV~~~~~~g---~~~~v~~~~~aa~~VIlaaGa~~sp~lLl~Sg-~~gi~~~~~~p~VG~n 293 (557)
+.|++|++++++ .+++||++.+.+| +..++. +++||||||+++||+|||+|| ..+||+. +++||+|
T Consensus 243 ~~V~~i~~~~~g---~~~~gV~~~~~~g~~~~~~~v~-----A~~VIlaaG~~~s~~lL~~Sg~ig~i~~~--~~~VG~n 312 (504)
T 1n4w_A 243 HQVKTIRQTKDG---GYALTVEQKDTDGKLLATKEIS-----CRYLFLGAGSLGSTELLVRARDTGTLPNL--NSEVGAG 312 (504)
T ss_dssp EEEEEEEECTTS---SEEEEEEEECTTCCEEEEEEEE-----EEEEEECSHHHHHHHHHHHHHHTTSSTTC--CTTTTCC
T ss_pred CEEEEEEECCCC---CEEEEEEEeCCCCccceeEEEe-----eCEEEEccCCCCCHHHHHhccccCCCCCC--Chhhccc
Confidence 999999998631 3899999986566 345554 689999999999999999999 7778855 5589999
Q ss_pred CCCCCCceEEeeCCCcccchhHHHhhccchhhhhhhccCCcccCCCCCCCCcccccccccccccCCCCCCCHHHHHHHHh
Q 008675 294 MSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIE 373 (557)
Q Consensus 294 l~dH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (557)
|+||+...+.+.... ... .+.+........+... . ......+ .+....+.
T Consensus 313 l~dh~~~~~~~~~~~-~~~----------~~~~~~~~~~~~~~~~-~-~~~~~~~-----~~~~~~~~------------ 362 (504)
T 1n4w_A 313 WGPNGNIMTARANHM-WNP----------TGAHQSSIPALGIDAW-D-NSDSSVF-----AEIAPMPA------------ 362 (504)
T ss_dssp BBCTTCEEEEEECCT-TCC----------CCSCCCSSCCEEEEEC-C-SSTTCEE-----EEEECCCC------------
T ss_pred cccCCcceeeeccCC-CCc----------ccCcCCCccEEEEecc-C-CCCCceE-----EEeccCCh------------
Confidence 999998665433211 000 0001000000000000 0 0000000 00000000
Q ss_pred hhccCCCCCccceEEEEeecccCcceEEEeccCCCCCCCeEecCCCCCHHHHHHHHHHHH-HHHHHHccccccccccccC
Q 008675 374 NMKALDDPAFRGGFILEKVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGIS-TIEKIIESKSFSKFKYESM 452 (557)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~p~s~g~V~l~~~d~~~~p~i~~~~~~~~~D~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 452 (557)
.+. ....+...+.+|.|||+|+|+++|+ .|+++|+.++ | +.+.++++ .+++++++.+. +. ..
T Consensus 363 ---~~~----~~~~~~~~~~~p~srG~V~L~s~~~----~i~~~~~~~~-D-~~~~~~~~~~~~~i~~~~~~--~~-~~- 425 (504)
T 1n4w_A 363 ---GLE----TWVSLYLAITKNPQRGTFVYDAATD----RAKLNWTRDQ-N-APAVNAAKALFDRINKANGT--IY-RY- 425 (504)
T ss_dssp ---SSC----CCEEEEEEEECCCCCBCEEEETTTT----EEEECCCGGG-G-HHHHHHHHHHHHHHHHHHTC--CB-CC-
T ss_pred ---HHH----hhhhhheeeeccCCCcEEEecCCCC----ceEeccCCCc-C-HHHHHHHHHHHHHHHhccCC--Cc-CC-
Confidence 000 1234445567899999999988654 7999999999 8 77888888 88899887653 10 00
Q ss_pred cchhhhccccCCCCCCCCCCCCChHHHHHHHHhccccccccccccccCcccCCCCeEeccCCceEeeccCCCCCCCCChH
Q 008675 453 SVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQ 532 (557)
Q Consensus 453 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~H~~GT~rMG~VVD~~~rV~g~~nL~V~DaSv~P~~~~~np~ 532 (557)
+ ...++ ++++ ...+.+|++||||||+|||++|||||++|||||||||||+++++||+
T Consensus 426 -----------------~--~~~~~-~~~~---~~~~~~H~~GTcrMG~VVD~~~rV~Gv~nLrVvDaSv~P~~~~~np~ 482 (504)
T 1n4w_A 426 -----------------D--LFGTQ-LKAF---ADDFCYHPLGGCVLGKATDDYGRVAGYKNLYVTDGSLIPGSVGVNPF 482 (504)
T ss_dssp -----------------S--SSSSS-CCSE---ECSEESSCBCSSCTTTTBCTTSBBTTCSSEEECSGGGSCSCCSSCSH
T ss_pred -----------------c--hhhhh-hhhh---ccCccccccCCceeeeEECCCCeEeccCCeEEeeccccCCCCCcChH
Confidence 0 00000 0000 35678999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhh
Q 008675 533 ATVMMLGRYMGVRILSERL 551 (557)
Q Consensus 533 lTi~ala~r~a~~i~~~~~ 551 (557)
+|+||||||+||+|+++..
T Consensus 483 ~ti~aiAeraAd~I~~~~~ 501 (504)
T 1n4w_A 483 VTITALAERNVERIIKQDV 501 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhhc
Confidence 9999999999998887754
No 10
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=100.00 E-value=4.2e-61 Score=511.44 Aligned_cols=437 Identities=17% Similarity=0.168 Sum_probs=294.6
Q ss_pred CCCCCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCCCC-CCCccchhhhhhc-----cCCCCCCCcCc-------
Q 008675 27 AQPVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYG-NPNITNLGSFGAA-----LSDLSSTSPSQ------- 92 (557)
Q Consensus 27 ~~~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~~~------- 92 (557)
..+..+||+||||+|++|+++|.+|++ |.+|+|||+|..... .+.. ..+... ..+|.+.+.+|
T Consensus 6 ~~~~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~~~~p~~---~~~~~~~~~~~~~~w~~~~~pq~~~~~~~ 82 (507)
T 1coy_A 6 LADGDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSWDTPGSDG---KIFCGMLNPDKRSMWLADKTDQPVSNFMG 82 (507)
T ss_dssp CCTTCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCSCSCCTTS---CSSCCSSSCCTTSBBSCSBCCCSSCSBTT
T ss_pred CCcCCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCCCCcc---ccccccccccccccccccccccccccccc
Confidence 344567999999999999999999999 999999999975421 1100 011111 12455555444
Q ss_pred --------ccc------CCCcccccCcceecccccccCceeecCCcchhcc--CCCChhhhh-hhhhhhhhhhccCCCC-
Q 008675 93 --------RFI------SEDGVINSRARVLGGGSCLNAGFYTRAAPYYVRE--VGWDERLVN-ESYQWVEKVVAFEPPM- 154 (557)
Q Consensus 93 --------~~~------~~~~~~~~~g~~lGG~s~~n~~~~~r~~~~~~~~--~gw~~~~~~-~~~~~~e~~~~~~~~~- 154 (557)
... .++.+.+.+|++|||+|++|+|.|.|+.+.+|+. .+|.|++++ |||+++|+.+...+..
T Consensus 83 ~~~~~~~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~dfd~w~~~w~~~~l~~pyy~~~E~~~~~~~~~~ 162 (507)
T 1coy_A 83 FGINKSIDRYVGVLDSERFSGIKVYQGRGVGGGSLVNGGMAVTPKRNYFEEILPSVDSNEMYNKYFPRANTGLGVNNIDQ 162 (507)
T ss_dssp BSCCCBCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHCTTSCHHHHHHTHHHHHHHHHTCBCCCH
T ss_pred cccccccccccceeeEecCCCeEEEEecccchHHHhhCeEEeeCCHHHHHhhCCccchhcchhHHHHHHHHHhCCCCCCC
Confidence 333 4567788999999999999999999999988775 478999999 9999999987654321
Q ss_pred --------CchhHHHHHHHHHcCCCC----CC-CC--------C----cCCCCceeeeeeEECCCCccccHHH-hhh-hc
Q 008675 155 --------RQWQSAVRDGLVEVGVLP----YN-GF--------T----YDHMYGTKIGGTIFDQNGQRHTAAD-LLE-YA 207 (557)
Q Consensus 155 --------~~~~~~~~~~~~~~g~~~----~~-~~--------~----~~~~~~~~~~~~~~~~~g~r~~~~~-~l~-~~ 207 (557)
.+..+.+.++++++|+++ .+ .+ . +..++.|..+ +.+| |+++.. |+. ..
T Consensus 163 ~~~~~~~~~~~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~~~~~~~~~~g~C~~g----c~~g-R~s~~~~~l~~a~ 237 (507)
T 1coy_A 163 AWFESTEWYKFARTGRKTAQRSGFTTAFVPNVYDFEYMKKEAAGQVTKSGLGGEVIYG----NNAG-KKSLDKTYLAQAA 237 (507)
T ss_dssp HHHHHCGGGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTCSCCSTTTTCSTTC----CSSS-BCCTTTTHHHHHH
T ss_pred ccccccccchHHHHHHHHHHHcCCCCccCCcccccCcccccCCCcccCcccccccccc----CCCC-CcChHHHHHHHHH
Confidence 234567889999999842 11 10 0 0011111111 1467 887644 776 44
Q ss_pred CCCCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCC---eeEEeeecCCceEEEEccCCcCchHHHHhhc-CCCcce
Q 008675 208 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGA---KHRAYLKNGPKNEIIVSAGALGSPQLLMLSG-AHNITV 283 (557)
Q Consensus 208 ~~~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~---~~~v~~~~~aa~~VIlaaGa~~sp~lLl~Sg-~~gi~~ 283 (557)
++.|++|++++.|++|++++++ .+++||++.+.+|. ..++. +++||||||+++||+|||+|| .-++|
T Consensus 238 ~~~n~~i~~~~~v~~i~~~~~g---~~~~gV~~~~~~g~~~~~~~~~-----A~~VIlaaGa~~sp~lL~~Sg~iG~lp- 308 (507)
T 1coy_A 238 ATGKLTITTLHRVTKVAPATGS---GYSVTMEQIDEQGNVVATKVVT-----ADRVFFAAGSVGTSKLLVSMKAQGHLP- 308 (507)
T ss_dssp HTTCEEEECSEEEEEEEECSSS---SEEEEEEEECTTSCEEEEEEEE-----EEEEEECSHHHHHHHHHHHHHHTTSST-
T ss_pred hcCCcEEEeCCEEEEEEECCCC---CEEEEEEEeCCCCcccccEEEE-----eCEEEEccCccCCHHHHHhcccCCCCC-
Confidence 5678999999999999998631 27999999864563 45554 679999999999999999999 54565
Q ss_pred eecCCccCCcCCCCCCceEEee-CCCcccchhHHHhhccchhhhhhhccCCcccCCCCCCCCcccccccccccccCCCCC
Q 008675 284 VLDQPLVGQGMSDNPMNAIFVP-SPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQ 362 (557)
Q Consensus 284 ~~~~p~VG~nl~dH~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (557)
+.+++||+||+||+....... .... ..+.+........+. .+. ......+ .+....+.
T Consensus 309 -nl~d~VG~~l~~h~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~-~~~-~~~~~~~-----~~~~~~~~- 367 (507)
T 1coy_A 309 -NLSSQVGEGWGNNGNIMVGRANHMWD------------ATGSKQATIPTMGID-NWA-DPTAPIF-----AEIAPLPA- 367 (507)
T ss_dssp -TSCTTTTCCBBCTTEEEEEEECCTTS------------CCCSCCCSSCCEEEE-CTT-CTTSCEE-----EEEECCCC-
T ss_pred -ccChhhCCccccCCcccccccccccc------------cccccCCCcceEEEe-ccC-CCCCCcE-----EEeccCCH-
Confidence 456689999999996433211 1000 000000000000000 000 0000000 00000000
Q ss_pred CCHHHHHHHHhhhccCCCCCccceEEEEeecccCcceEEEeccCCCCCCCeEecCCCCCHHHHHHHHHHHH-HHHHHHcc
Q 008675 363 RTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGIS-TIEKIIES 441 (557)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~g~V~l~~~d~~~~p~i~~~~~~~~~D~~~~~~~~~-~~~~~~~~ 441 (557)
.+. ....++..+.+|.|+|+|+|+++|+ .|+++|+.++ | +.+.++++ .+++++++
T Consensus 368 --------------~~~----~~~~~~~~~~~p~s~G~V~L~s~~~----~i~~~~~~~~-D-~~~~~~~~~~~~~i~~~ 423 (507)
T 1coy_A 368 --------------GLE----TYVSLYLAITKNPERARFQFNSGTG----KVDLTWAQSQ-N-QKGIDMAKKVFDKINQK 423 (507)
T ss_dssp --------------SSC----CCEEEEEEEECCCCCBCEEEETTTT----EEEECCCGGG-G-HHHHHHHHHHHHHHHHH
T ss_pred --------------HHh----hheeeeEEEeeeCCCcEEEEccCCC----ceeeccCCCC-c-HHHHHHHHHHHHHHHhh
Confidence 000 1233444567899999999988654 8999999999 8 46677777 88999987
Q ss_pred ccccccccccCcchhhhccccCCCCCCCCCCCCChHHHHHHHHhccccccccccccccCcccCCCCeEeccCCceEeecc
Q 008675 442 KSFSKFKYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDGS 521 (557)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~H~~GT~rMG~VVD~~~rV~g~~nL~V~DaS 521 (557)
.+. +...+ . ..+++ ++| ...+.+|++||||||+|||++|||||++||||||||
T Consensus 424 ~~~--~~~~~----------------~----~~~d~--~~~---~~~~~~H~~GTcrMG~VVD~~~rV~Gv~nLrVvDaS 476 (507)
T 1coy_A 424 EGT--IYRTD----------------L----FGVYY--KTW---GDDFTYHPLGGVLLNKATDNFGRLPEYPGLYVVDGS 476 (507)
T ss_dssp HTC--CBCSS----------------C----C--CC--CSS---BCSEESCCBCSSCTTTTSCTTSBCTTSTTEEECSGG
T ss_pred cCC--cccCc----------------c----cccch--hhh---cccccccccCCcchhheECCCCeEeccCCeEEeech
Confidence 652 21110 0 01111 122 356789999999999999999999999999999999
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHhhhh
Q 008675 522 TFYYSPGTNPQATVMMLGRYMGVRILSERLA 552 (557)
Q Consensus 522 v~P~~~~~np~lTi~ala~r~a~~i~~~~~~ 552 (557)
|||+++++||++||||||+|+||+|++++++
T Consensus 477 v~P~~~~~Np~~ti~alAeraAd~I~~~~~~ 507 (507)
T 1coy_A 477 LVPGNVGVNPFVTITALAERNMDKIISSDIQ 507 (507)
T ss_dssp GSCSCCSSCSHHHHHHHHHHHHHHHHHHTC-
T ss_pred hccCCCCcChHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999888753
No 11
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=100.00 E-value=3.3e-47 Score=412.35 Aligned_cols=470 Identities=16% Similarity=0.145 Sum_probs=274.3
Q ss_pred CCCCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCCCCCCCccc----h------hhhhhc-----cC--------
Q 008675 28 QPVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYGNPNITN----L------GSFGAA-----LS-------- 83 (557)
Q Consensus 28 ~~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~~~~~~~~~----~------~~~~~~-----~~-------- 83 (557)
.|+..|||||||+|++|+.+|..|++ |++|+|||++........... . ..+... ..
T Consensus 42 ~~~~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~l~~~ 121 (623)
T 3pl8_A 42 GMDIKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLKIGAHKKNTVEYQKNIDKFVNVIQGQLMSVSVPVNTL 121 (623)
T ss_dssp ----CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSSTTCCTTCSHHHHHSGGGTHHHHHHTCEESCCCCCCC
T ss_pred cccccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcccccccccccCCCccHHHHHHHHHHhhhhcccccccc
Confidence 34467999999999999999999999 999999999986542110000 0 000000 00
Q ss_pred --------CCCCCCcCc-cccC--CCccc----ccCcceecccccccCceeecCCcchh--ccCCC---Chhhhhhhhhh
Q 008675 84 --------DLSSTSPSQ-RFIS--EDGVI----NSRARVLGGGSCLNAGFYTRAAPYYV--REVGW---DERLVNESYQW 143 (557)
Q Consensus 84 --------~~~~~~~~~-~~~~--~~~~~----~~~g~~lGG~s~~n~~~~~r~~~~~~--~~~gw---~~~~~~~~~~~ 143 (557)
++....... .... ...+. ...+..+||.+.+|.+...|..+.+. ....| .++++.++|+.
T Consensus 122 ~~~~~~~~~~~~~~v~l~~g~~~~~~~~~~l~~~~~~~~vGG~~~~~~g~~~r~~~~e~~~~l~~~~v~~~~~l~~~~~~ 201 (623)
T 3pl8_A 122 VVDTLSPTSWQASTFFVRNGSNPEQDPLRNLSGQAVTRVVGGMSTAWTCATPRFDREQRPLLVKDDADADDAEWDRLYTK 201 (623)
T ss_dssp CCCCSCTTSCCCSSCCSCTTCCTTCCTTSCCTTCEECCSTTGGGGTCCCBCCCCCGGGSCCSSTTCHHHHHHHHHHHHHH
T ss_pred ccccccccccccCcEEeccCCCcccccchhhhhhcccccccCcceeeccccccCChHHhhhhhcccCccChhhHHHHHHH
Confidence 000000000 0000 00011 12466789999999998888776320 01123 24667788887
Q ss_pred hhhhhccCCCC--Cchh-HHHHHHHHHcCCCCCCCCCcCCCCceeeeeeEECCCCccccHHH-hhh-h------cCCCCc
Q 008675 144 VEKVVAFEPPM--RQWQ-SAVRDGLVEVGVLPYNGFTYDHMYGTKIGGTIFDQNGQRHTAAD-LLE-Y------ANPSGL 212 (557)
Q Consensus 144 ~e~~~~~~~~~--~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~r~~~~~-~l~-~------~~~~n~ 212 (557)
.+..+...... .... ......+........ . .... ............|+++.. ++. . .+++|+
T Consensus 202 ~~~l~~vgg~~~~~~~~~~~~~~~l~~~~~~~~-~--~~~~---p~a~~~~~~~~~r~s~~~~~l~~~~~l~~~~~~~nv 275 (623)
T 3pl8_A 202 AESYFQTGTDQFKESIRHNLVLNKLTEEYKGQR-D--FQQI---PLAATRRSPTFVEWSSANTVFDLQNRPNTDAPEERF 275 (623)
T ss_dssp HHHHHTEESCTTTTCHHHHHHHHHHHHHTTTTS-C--CEEC---CEEEEEEETTEEEECCHHHHCCCCCEEETTEEEEEE
T ss_pred HHHhcccccccccCccccccchHHHHHhhhhcc-c--cccc---chhhccCCCCccccchHHhhhhhhhcchhhccCCCE
Confidence 77655433221 1111 111222222111000 0 0000 001011112223444433 554 2 445699
Q ss_pred EEEcCcEEEEEEEecCCCCCCeEEEEEEEe-CCCCeeEEeeecCCceEEEEccCCcCchHHHHhhc--------CCCcce
Q 008675 213 TLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITV 283 (557)
Q Consensus 213 ~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~-~~g~~~~v~~~~~aa~~VIlaaGa~~sp~lLl~Sg--------~~gi~~ 283 (557)
+|++++.|++|++++++ .+++||++.+ .+|+..++. +++||||+|++.||+||++|| .+||++
T Consensus 276 ~v~~~~~V~~i~~~~~~---~~v~GV~~~~~~~g~~~~i~-----A~~VIlaaG~~~s~~lL~~sgiG~~~~l~~~~i~~ 347 (623)
T 3pl8_A 276 NLFPAVACERVVRNALN---SEIESLHIHDLISGDRFEIK-----ADVYVLTAGAVHNTQLLVNSGFGQLGRPNPANPPE 347 (623)
T ss_dssp EEECSEEEEEEEECTTS---SCEEEEEEEETTTCCEEEEC-----EEEEEECSCTTHHHHHHHTTTSSCCSSCCTTSCCS
T ss_pred EEEeCCEEEEEEEECCC---CEEEEEEEEEcCCCcEEEEE-----CCEEEEcCCCcCCHHHHHhcCCCccccccccCCCC
Confidence 99999999999997532 3899999997 467766664 789999999999999999998 677877
Q ss_pred eecCCccCCcCCCCCCceEEeeCCCcccchhHHHhhccchhhhhhhccCCccc--CCC----------------------
Q 008675 284 VLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFA--GGS---------------------- 339 (557)
Q Consensus 284 ~~~~p~VG~nl~dH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~---------------------- 339 (557)
++|.||+||+||+...+.+.++++....+.+.+... .|. .|..+. ...
T Consensus 348 --~l~~vG~nl~dh~~~~~~~~~~~~~~~~~~~~~~~~---g~~---g~~~~~~~~~~~~p~~~~~p~~~~~~~~~~~~~ 419 (623)
T 3pl8_A 348 --LLPSLGSYITEQSLVFCQTVMSTELIDSVKSDMTIR---GTP---GELTYSVTYTPGASTNKHPDWWNEKVKNHMMQH 419 (623)
T ss_dssp --SCTTTTBSCBCCCEEEEEEEECHHHHHHHTTTCEEE---SCT---TSTTCEEECCTTCTTCSSCHHHHHHHHHHHHHC
T ss_pred --CCcccccchhhCcCceEEEEECCccccccccccccc---ccC---CCcceecccccCcccccCCchhhhhhhhhhhcc
Confidence 999999999999998888877654211111000000 000 000000 000
Q ss_pred ---CCCCCccccccc-ccccccCCCCCCCHHHHHHHHh--hhc-cCCCC-CccceEEEEeecccCcceEEEecc--CCCC
Q 008675 340 ---PSPRDYGMFSPK-IGQLSKVPPKQRTPEAIAEAIE--NMK-ALDDP-AFRGGFILEKVMGPVSTGHLELRT--RNPN 409 (557)
Q Consensus 340 ---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~-~~~~~~~~~~~~~p~s~g~V~l~~--~d~~ 409 (557)
.+...+..+..+ ...+....+.+ ....+..+. .+. .+..+ ......+.+ ..|.++|+|+|++ +|++
T Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e--~~p~~~n~v~L~~~~~D~~ 495 (623)
T 3pl8_A 420 QEDPLPIPFEDPEPQVTTLFQPSHPWH--TQIHRDAFSYGAVQQSIDSRLIVDWRFFGR--TEPKEENKLWFSDKITDAY 495 (623)
T ss_dssp TTCCCSSCTTCCCCEEECCCBTTBCEE--EEEECCSCCCSCCCCSSCGGGEEEEEEEEC--CCCCTTCEEEEEEEEECTT
T ss_pred cccccccccccccccccccccccCcch--hhhhhhhccccccccccccceEEEEEEEEe--eccCCCCEEEECCCCcCCC
Confidence 000000000000 00000000000 000000000 000 00000 001222333 4588899999986 8999
Q ss_pred CCCeEecCCCCCHH-HHHHHHHHHHHHHHHHccccccccccccCcchhhhccccCCCCCCCCCCCCChHHHHHHHHhccc
Q 008675 410 DNPSVTFNYFKEPE-DLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVM 488 (557)
Q Consensus 410 ~~p~i~~~~~~~~~-D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 488 (557)
+.|+++++|..+++ |++++.++++.+.++++.++....... + .+ ....
T Consensus 496 g~P~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~~-------------------~-------~~-----~~~~ 544 (623)
T 3pl8_A 496 NMPQPTFDFRFPAGRTSKEAEDMMTDMCVMSAKIGGFLPGSL-------------------P-------QF-----MEPG 544 (623)
T ss_dssp SSEEEEEECCCCTTHHHHHHHHHHHHHHHHHTTTEEECTTSC-------------------S-------EE-----CCTT
T ss_pred CCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHhcCCcccCch-------------------h-------hc-----cCCC
Confidence 99999999999999 999999999999999988764332100 0 00 0135
Q ss_pred cccccccccccC------ccc-CCCCeEeccCCceEeeccCCCCCCCCChHHHHHHHHHHHHHHHHHhhhhcc
Q 008675 489 TIWHYHGGCQVG------KVV-DHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSERLASN 554 (557)
Q Consensus 489 ~~~H~~GT~rMG------~VV-D~~~rV~g~~nL~V~DaSv~P~~~~~np~lTi~ala~r~a~~i~~~~~~~~ 554 (557)
+++|++|||||| +|| |++|||||++||||+|+|+||+++++||++|+||||+|+||+|+++....+
T Consensus 545 ~~~H~~gt~~mg~~~~~~~vvvd~~~~~~~~~~l~v~d~s~~p~~~~~np~~t~~a~a~r~a~~i~~~~~~~~ 617 (623)
T 3pl8_A 545 LVLHLGGTHRMGFDEKEDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCEYIKQNFTPSP 617 (623)
T ss_dssp TTCCCBCTTCBCSSTTTTTCSBCTTCBBTTCSSEEECSGGGCCSCCCSCCHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred CcccCCCceeCCCCCCCCeeEECCCCCEecCCCeEEecCCccCCCCCcChHHHHHHHHHHHHHHHHHHhhcCC
Confidence 689999999999 586 999999999999999999999999999999999999999999988865554
No 12
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.52 E-value=1e-13 Score=147.37 Aligned_cols=62 Identities=16% Similarity=0.305 Sum_probs=48.3
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCCeeEEeeecCCc-eEEEEccCCcC-chHHHH
Q 008675 203 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPK-NEIIVSAGALG-SPQLLM 274 (557)
Q Consensus 203 ~l~~~~~~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~v~~~~~aa-~~VIlaaGa~~-sp~lLl 274 (557)
++..+++.|++|+++++|++|+.++++ +|+||++.+ +|+..++. + |.||||+|++. ++.+|.
T Consensus 208 L~~~~~~~Gv~i~~~t~v~~L~~~~~g----~v~GV~~~~-~g~~~~i~-----A~k~VVlAtGG~~~n~~m~~ 271 (510)
T 4at0_A 208 LVETAEKLGVRAEYDMRVQTLVTDDTG----RVVGIVAKQ-YGKEVAVR-----ARRGVVLATGSFAYNDKMIE 271 (510)
T ss_dssp HHHHHHHTTCEEECSEEEEEEEECTTC----CEEEEEEEE-TTEEEEEE-----EEEEEEECCCCCTTCHHHHH
T ss_pred HHHHHHHcCCEEEecCEeEEEEECCCC----cEEEEEEEE-CCcEEEEE-----eCCeEEEeCCChhhCHHHHH
Confidence 444555679999999999999998543 999999986 56555665 5 69999999998 555554
No 13
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.38 E-value=1.4e-12 Score=140.18 Aligned_cols=62 Identities=16% Similarity=0.210 Sum_probs=48.4
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCCeeEEeeecCCceEEEEccCCcCchHHH
Q 008675 203 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLL 273 (557)
Q Consensus 203 ~l~~~~~~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~v~~~~~aa~~VIlaaGa~~sp~lL 273 (557)
++..+++.|++|+++++|++|+.++++ +++||++.+.+|+..++. +|.||||+|++...+=|
T Consensus 256 L~~~~~~~gv~i~~~~~v~~l~~~~~g----~v~Gv~~~~~~g~~~~i~-----A~~VVlAtGg~s~~~~~ 317 (566)
T 1qo8_A 256 LRKAAKEQGIDTRLNSRVVKLVVNDDH----SVVGAVVHGKHTGYYMIG-----AKSVVLATGGYGMNKEM 317 (566)
T ss_dssp HHHHHHHTTCCEECSEEEEEEEECTTS----BEEEEEEEETTTEEEEEE-----EEEEEECCCCCTTCHHH
T ss_pred HHHHHHhcCCEEEeCCEEEEEEECCCC----cEEEEEEEeCCCcEEEEE-----cCEEEEecCCcccCHHH
Confidence 334555679999999999999988722 999999986667655665 69999999999875433
No 14
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.36 E-value=3.2e-12 Score=137.66 Aligned_cols=60 Identities=17% Similarity=0.254 Sum_probs=47.1
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCCeeEEeeecCCceEEEEccCCcCchH
Q 008675 203 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQ 271 (557)
Q Consensus 203 ~l~~~~~~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~v~~~~~aa~~VIlaaGa~~sp~ 271 (557)
++..+++.|++|+++++|++|+.++++ +++||++.+.+|+..++. ++.||||+|++...+
T Consensus 261 L~~~~~~~gv~i~~~~~v~~l~~~~~g----~v~Gv~~~~~~g~~~~i~-----a~~VVlAtGg~~~n~ 320 (571)
T 1y0p_A 261 LYDNAVKRNIDLRMNTRGIEVLKDDKG----TVKGILVKGMYKGYYWVK-----ADAVILATGGFAKNN 320 (571)
T ss_dssp HHHHHHHTTCEEESSEEEEEEEECTTS----CEEEEEEEETTTEEEEEE-----CSEEEECCCCCTTCH
T ss_pred HHHHHHhcCCEEEeCCEeeEeEEcCCC----eEEEEEEEeCCCcEEEEE-----CCeEEEeCCCcccCH
Confidence 334555679999999999999988733 899999986567655665 688999999987643
No 15
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.24 E-value=6.1e-11 Score=127.50 Aligned_cols=63 Identities=17% Similarity=0.284 Sum_probs=47.8
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCCeeEEeeecCCceEEEEccCCcCc-hHHHH
Q 008675 203 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGS-PQLLM 274 (557)
Q Consensus 203 ~l~~~~~~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~v~~~~~aa~~VIlaaGa~~s-p~lLl 274 (557)
++..+++.|++|+++++|++|+.++++ +++||++.+.+|+..++. ++.||||+|++.. +.++.
T Consensus 261 L~~~~~~~gv~i~~~t~v~~l~~~~~g----~v~GV~~~~~~G~~~~i~-----A~~VVlAtGg~~~~~~~~~ 324 (572)
T 1d4d_A 261 LWDNAVKRGTDIRLNSRVVRILEDASG----KVTGVLVKGEYTGYYVIK-----ADAVVIAAGGFAKNNERVS 324 (572)
T ss_dssp HHHHHHHTTCEEESSEEEEEEEEC--C----CEEEEEEEETTTEEEEEE-----CSEEEECCCCCTTCHHHHH
T ss_pred HHHHHHHcCCeEEecCEEEEEEECCCC----eEEEEEEEeCCCcEEEEE-----cCEEEEeCCCCccCHHHHH
Confidence 334555679999999999999987722 899999986567655665 6999999999875 45544
No 16
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.24 E-value=6e-11 Score=128.79 Aligned_cols=56 Identities=16% Similarity=0.210 Sum_probs=45.1
Q ss_pred hhhcCCCCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEe-CCCCeeEEeeecCCceEEEEccCCcCc
Q 008675 204 LEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGS 269 (557)
Q Consensus 204 l~~~~~~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~-~~g~~~~v~~~~~aa~~VIlaaGa~~s 269 (557)
+..+.+.|++|++++.|++|+.+++ +|+||.+.+ .+|+...+. ++.||||+|++..
T Consensus 165 ~~~a~~~gv~i~~~~~v~~L~~~~g-----~v~Gv~~~~~~~G~~~~i~-----A~~VVlATGG~~~ 221 (660)
T 2bs2_A 165 ANECLKLGVSIQDRKEAIALIHQDG-----KCYGAVVRDLVTGDIIAYV-----AKGTLIATGGYGR 221 (660)
T ss_dssp HHHHHHHTCEEECSEEEEEEEEETT-----EEEEEEEEETTTCCEEEEE-----CSEEEECCCCCGG
T ss_pred HHHHHhCCCEEEECcEEEEEEecCC-----EEEEEEEEECCCCcEEEEE-----cCEEEEccCcchh
Confidence 3444557999999999999998765 999999876 467665665 7899999999874
No 17
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.24 E-value=8.5e-11 Score=126.67 Aligned_cols=57 Identities=16% Similarity=0.219 Sum_probs=46.7
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEe-CCCCeeEEeeecCCceEEEEccCCcCc
Q 008675 203 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGS 269 (557)
Q Consensus 203 ~l~~~~~~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~-~~g~~~~v~~~~~aa~~VIlaaGa~~s 269 (557)
++..+.+.|++|++++.|++|+.+++ +|+||.+.+ .+|+..++. ++.||||+|++..
T Consensus 161 L~~~~~~~gv~i~~~~~v~~Li~~~g-----~v~Gv~~~~~~~G~~~~i~-----A~~VVlATGG~~~ 218 (621)
T 2h88_A 161 LYGRSLRYDTSYFVEYFALDLLMENG-----ECRGVIALCIEDGTIHRFR-----AKNTVIATGGYGR 218 (621)
T ss_dssp HHHHHTTSCCEEEETEEEEEEEEETT-----EEEEEEEEETTTCCEEEEE-----EEEEEECCCCCGG
T ss_pred HHHHHHhCCCEEEEceEEEEEEEECC-----EEEEEEEEEcCCCcEEEEE-----cCeEEECCCcccc
Confidence 34456678999999999999998765 999999986 467666665 7899999999874
No 18
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.22 E-value=1.5e-11 Score=124.70 Aligned_cols=61 Identities=18% Similarity=0.140 Sum_probs=44.3
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCCeeEEeeecCCceEEEEccCCcCchHHHHhh
Q 008675 203 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLS 276 (557)
Q Consensus 203 ~l~~~~~~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~v~~~~~aa~~VIlaaGa~~sp~lLl~S 276 (557)
+...+++.|++|+++++|++|..+++ .+..|.. .+|+..++. ++.||+|+|+. |++|+...
T Consensus 156 l~~~~~~~Gv~i~~~~~v~~i~~~~~-----~~~~v~~--~~g~~~~~~-----a~~VV~A~G~~-s~~l~~~~ 216 (369)
T 3dme_A 156 YQGDAESDGAQLVFHTPLIAGRVRPE-----GGFELDF--GGAEPMTLS-----CRVLINAAGLH-APGLARRI 216 (369)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEECTT-----SSEEEEE--CTTSCEEEE-----EEEEEECCGGG-HHHHHHTE
T ss_pred HHHHHHHCCCEEECCCEEEEEEEcCC-----ceEEEEE--CCCceeEEE-----eCEEEECCCcc-hHHHHHHh
Confidence 34455667999999999999998765 2233544 356545554 79999999974 88887765
No 19
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.18 E-value=1.6e-10 Score=124.37 Aligned_cols=58 Identities=14% Similarity=0.102 Sum_probs=45.2
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEe-CCCCeeEEeeecCCceEEEEccCCcCc
Q 008675 203 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGS 269 (557)
Q Consensus 203 ~l~~~~~~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~-~~g~~~~v~~~~~aa~~VIlaaGa~~s 269 (557)
++..+.+.|++|++++.|++|+.++++ +++||.+.+ .+|+..++. ++.||||+|++..
T Consensus 149 L~~~~~~~gv~i~~~~~v~~L~~~~~g----~v~Gv~~~~~~~g~~~~i~-----A~~VVlAtGg~~~ 207 (588)
T 2wdq_A 149 LYQQNLKNHTTIFSEWYALDLVKNQDG----AVVGCTALCIETGEVVYFK-----ARATVLATGGAGR 207 (588)
T ss_dssp HHHHHHHTTCEEEETEEEEEEEECTTS----CEEEEEEEETTTCCEEEEE-----EEEEEECCCCCGG
T ss_pred HHHHHHhCCCEEEeCcEEEEEEECCCC----EEEEEEEEEcCCCeEEEEE-----cCEEEECCCCCcc
Confidence 334455569999999999999987333 899999886 467665665 7899999999764
No 20
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.18 E-value=1e-10 Score=125.23 Aligned_cols=63 Identities=22% Similarity=0.269 Sum_probs=50.4
Q ss_pred hhhcCCCCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEeC-CCCeeEEeeecCCceEEEEccCCcCchHHHHhhc
Q 008675 204 LEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277 (557)
Q Consensus 204 l~~~~~~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~-~g~~~~v~~~~~aa~~VIlaaGa~~sp~lLl~Sg 277 (557)
...+.+.|++|+++++|++|..+++ +++||++.+. +|+..++. ++.||+|+|+ ++..|+...|
T Consensus 177 ~~~a~~~G~~i~~~~~V~~l~~~~g-----~v~gV~~~d~~tg~~~~i~-----A~~VV~AaG~-~s~~l~~~~g 240 (561)
T 3da1_A 177 MKEAVARGAVALNYMKVESFIYDQG-----KVVGVVAKDRLTDTTHTIY-----AKKVVNAAGP-WVDTLREKDR 240 (561)
T ss_dssp HHHHHHTTCEEEESEEEEEEEEETT-----EEEEEEEEETTTCCEEEEE-----EEEEEECCGG-GHHHHHHTTT
T ss_pred HHHHHHcCCEEEcCCEEEEEEEcCC-----eEEEEEEEEcCCCceEEEE-----CCEEEECCCc-chHHHHHhcC
Confidence 3455567999999999999999876 8999999863 45555665 7999999997 6888887666
No 21
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.17 E-value=9.8e-11 Score=124.76 Aligned_cols=37 Identities=35% Similarity=0.560 Sum_probs=33.5
Q ss_pred CCCccEEEECCCcchHHHHHhhhcCCeEEEEeeCCCC
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQNASVLLLERGGSP 66 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Laeg~~VlvLE~G~~~ 66 (557)
..+|||||||||++|+.+|..|++|.+|+||||+...
T Consensus 6 ~~~~DVvVVG~G~AGl~aAl~la~G~~V~vlEk~~~~ 42 (540)
T 1chu_A 6 EHSCDVLIIGSGAAGLSLALRLADQHQVIVLSKGPVT 42 (540)
T ss_dssp SEECSEEEECCSHHHHHHHHHHTTTSCEEEECSSCTT
T ss_pred CCCCCEEEECccHHHHHHHHHHhcCCcEEEEECCCCC
Confidence 3469999999999999999999999999999998753
No 22
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.11 E-value=5e-10 Score=120.74 Aligned_cols=58 Identities=16% Similarity=0.186 Sum_probs=44.8
Q ss_pred hhhhcCCCC-cEEEcCcEEEEEEEecCCCCCCeEEEEEEEe-CCCCeeEEeeecCCceEEEEccCCcCch
Q 008675 203 LLEYANPSG-LTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSP 270 (557)
Q Consensus 203 ~l~~~~~~n-~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~-~~g~~~~v~~~~~aa~~VIlaaGa~~sp 270 (557)
++..+.+.+ ++|++++.|++|+.+++ +++||.+.+ .+|+..++. ++.||+|+|++...
T Consensus 140 L~~~~~~~gnv~i~~~~~v~~l~~~~g-----~v~Gv~~~~~~~G~~~~i~-----A~~VVlAtGg~s~~ 199 (602)
T 1kf6_A 140 LFQTSLQFPQIQRFDEHFVLDILVDDG-----HVRGLVAMNMMEGTLVQIR-----ANAVVMATGGAGRV 199 (602)
T ss_dssp HHHHHTTCTTEEEEETEEEEEEEEETT-----EEEEEEEEETTTTEEEEEE-----CSCEEECCCCCGGG
T ss_pred HHHHHHhCCCcEEEeCCEEEEEEEeCC-----EEEEEEEEEcCCCcEEEEE-----cCeEEECCCCCccc
Confidence 344445445 99999999999998865 899998876 467655564 68899999997654
No 23
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.08 E-value=5.4e-10 Score=116.52 Aligned_cols=55 Identities=20% Similarity=0.375 Sum_probs=42.3
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCCeeEEeeecCCceEEEEccCCcCchH
Q 008675 203 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQ 271 (557)
Q Consensus 203 ~l~~~~~~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~v~~~~~aa~~VIlaaGa~~sp~ 271 (557)
++..+++.|++|+++++|++|..+++ ++.+|++. +|+ ++. ++.||+|+|+...|.
T Consensus 140 L~~~~~~~GV~i~~~~~V~~i~~~~~-----~v~~V~~~--~G~--~i~-----Ad~VVlAtGg~s~~~ 194 (447)
T 2i0z_A 140 LLTRLKDLGVKIRTNTPVETIEYENG-----QTKAVILQ--TGE--VLE-----TNHVVIAVGGKSVPQ 194 (447)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEETT-----EEEEEEET--TCC--EEE-----CSCEEECCCCSSSGG
T ss_pred HHHHHHHCCCEEEeCcEEEEEEecCC-----cEEEEEEC--CCC--EEE-----CCEEEECCCCCcCCC
Confidence 34455567999999999999998765 77888764 564 343 689999999988663
No 24
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.08 E-value=1.7e-10 Score=118.83 Aligned_cols=38 Identities=29% Similarity=0.468 Sum_probs=32.3
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 29 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 29 ~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
++..|||||||+|++|+++|..|++ |.+|+|||+++..
T Consensus 24 ~~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~ 62 (417)
T 3v76_A 24 VAEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAP 62 (417)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 4567999999999999999999999 9999999998753
No 25
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.08 E-value=1.6e-09 Score=116.28 Aligned_cols=63 Identities=19% Similarity=0.151 Sum_probs=49.0
Q ss_pred hhhcCCCCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEeC-CCCeeEEeeecCCceEEEEccCCcCchHHHHhhc
Q 008675 204 LEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277 (557)
Q Consensus 204 l~~~~~~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~-~g~~~~v~~~~~aa~~VIlaaGa~~sp~lLl~Sg 277 (557)
+..+.+.|++|+++++|++|+.+++ ++.+|++.+. +|+..++. ++.||+|+|++ +..|+...+
T Consensus 195 ~~~a~~~Ga~i~~~t~V~~l~~~~~-----~v~gV~~~d~~tg~~~~i~-----A~~VV~AaG~w-s~~l~~~~g 258 (571)
T 2rgh_A 195 IKKAAEDGAYLVSKMKAVGFLYEGD-----QIVGVKARDLLTDEVIEIK-----AKLVINTSGPW-VDKVRNLNF 258 (571)
T ss_dssp HHHHHHTTCEEESSEEEEEEEEETT-----EEEEEEEEETTTCCEEEEE-----BSCEEECCGGG-HHHHHTTCC
T ss_pred HHHHHHcCCeEEeccEEEEEEEeCC-----EEEEEEEEEcCCCCEEEEE-----cCEEEECCChh-HHHHHHhhc
Confidence 3455667999999999999998876 8999999864 45544565 79999999975 788775444
No 26
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.06 E-value=2.3e-10 Score=116.53 Aligned_cols=37 Identities=38% Similarity=0.583 Sum_probs=33.4
Q ss_pred CCCccEEEECCCcchHHHHHhhhcCCeEEEEeeCCCC
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQNASVLLLERGGSP 66 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Laeg~~VlvLE~G~~~ 66 (557)
+..+||||||+|++|+++|++|++|.+|+|||++...
T Consensus 7 ~~~~dv~IIGaGi~Gls~A~~La~G~~V~vlE~~~~~ 43 (381)
T 3nyc_A 7 PIEADYLVIGAGIAGASTGYWLSAHGRVVVLEREAQP 43 (381)
T ss_dssp EEECSEEEECCSHHHHHHHHHHTTTSCEEEECSSSST
T ss_pred CCcCCEEEECCcHHHHHHHHHHhCCCCEEEEECCCCc
Confidence 3468999999999999999999999999999998643
No 27
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.06 E-value=4e-10 Score=115.00 Aligned_cols=35 Identities=26% Similarity=0.486 Sum_probs=32.8
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
..++||||||+|++|+++|++|++ |.+|+|||++.
T Consensus 3 ~~~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 3 PEKSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 457999999999999999999999 99999999984
No 28
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.04 E-value=4.3e-10 Score=117.06 Aligned_cols=38 Identities=26% Similarity=0.352 Sum_probs=34.6
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CC-eEEEEeeCCCC
Q 008675 29 PVSYYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGGSP 66 (557)
Q Consensus 29 ~~~~~DvIIVGsG~aG~~~A~~Lae-g~-~VlvLE~G~~~ 66 (557)
+...|||||||+|++|+++|++|++ |. +|+|||++...
T Consensus 3 ~~~~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~~ 42 (438)
T 3dje_A 3 VTKSSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPVP 42 (438)
T ss_dssp CCTTSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCSS
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCCC
Confidence 4557999999999999999999999 99 99999998764
No 29
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.03 E-value=1.4e-09 Score=118.39 Aligned_cols=57 Identities=12% Similarity=0.033 Sum_probs=43.1
Q ss_pred hcCCC-Cc-EEEcCcEEEEEEEecCCCCCCeEEEEEEEe-CCCCeeEEeeecCCceEEEEccCCcCc
Q 008675 206 YANPS-GL-TLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGS 269 (557)
Q Consensus 206 ~~~~~-n~-~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~-~~g~~~~v~~~~~aa~~VIlaaGa~~s 269 (557)
.+++. |+ +|++++.|++|+.++++ ..+|+||.+.+ .+|+..++. ++.||||+|++..
T Consensus 160 ~~~~~~gv~~i~~~~~v~~L~~~~~~--~g~v~Gv~~~~~~~g~~~~i~-----A~~VVlAtGG~~~ 219 (643)
T 1jnr_A 160 AAKMAVGEENIYERVFIFELLKDNND--PNAVAGAVGFSVREPKFYVFK-----AKAVILATGGATL 219 (643)
T ss_dssp HHHHHHCGGGEECSEEEEEEEECTTC--TTBEEEEEEEESSSSCEEEEE-----CSEEEECCCCBCS
T ss_pred HHHhcCCCcEEEecCEEEEEEEcCCc--cceeEEEEEEEecCCcEEEEE-----cCEEEECCCcccc
Confidence 44444 89 99999999999987540 12899999865 456655665 6999999999875
No 30
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.02 E-value=4.4e-10 Score=121.94 Aligned_cols=51 Identities=16% Similarity=0.113 Sum_probs=41.3
Q ss_pred CcEEEcCcEEEEEEEecCCCCCCeEEEEEEEe-CCCCeeEEeeecCCceEEEEccCCcC
Q 008675 211 GLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALG 268 (557)
Q Consensus 211 n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~-~~g~~~~v~~~~~aa~~VIlaaGa~~ 268 (557)
|++|+.++.|++|+.+++. ..+|+||.+.+ .+|+...+. +|.||||+|+++
T Consensus 182 gV~i~~~~~v~dLi~~~~~--~g~v~Gv~~~~~~~g~~~~i~-----Ak~VVLATGG~g 233 (662)
T 3gyx_A 182 QDRIIERIFIVKLLLDKNT--PNRIAGAVGFNLRANEVHIFK-----ANAMVVACGGAV 233 (662)
T ss_dssp TTTEECSEEECCCEECSSS--TTBEEEEEEEESSSSCEEEEE-----CSEEEECCCCBC
T ss_pred CcEEEEceEEEEEEEeCCc--cceEEEEEEEEcCCCcEEEEE-----eCEEEECCCccc
Confidence 9999999999999997650 12899999876 456666665 799999999977
No 31
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.00 E-value=4.3e-09 Score=111.35 Aligned_cols=59 Identities=15% Similarity=0.050 Sum_probs=44.8
Q ss_pred hhhcCCCCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEe-CCCCeeEEeeecCCceEEEEccCCcCchHHHH
Q 008675 204 LEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 274 (557)
Q Consensus 204 l~~~~~~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~-~~g~~~~v~~~~~aa~~VIlaaGa~~sp~lLl 274 (557)
+..+.+.|++|+++++|++|..++ ++.+|.+.+ .+|+..++. ++.||+|+|++ +..|+.
T Consensus 156 ~~~a~~~Gv~i~~~~~V~~l~~~~------~~~~V~~~d~~~G~~~~i~-----A~~VV~AtG~~-s~~l~~ 215 (501)
T 2qcu_A 156 AQMVVRKGGEVLTRTRATSARREN------GLWIVEAEDIDTGKKYSWQ-----ARGLVNATGPW-VKQFFD 215 (501)
T ss_dssp HHHHHHTTCEEECSEEEEEEEEET------TEEEEEEEETTTCCEEEEE-----ESCEEECCGGG-HHHHHH
T ss_pred HHHHHHcCCEEEcCcEEEEEEEeC------CEEEEEEEECCCCCEEEEE-----CCEEEECCChh-HHHHHH
Confidence 345556799999999999998764 467888875 356655565 79999999974 777765
No 32
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.99 E-value=3.9e-09 Score=108.23 Aligned_cols=36 Identities=33% Similarity=0.540 Sum_probs=33.2
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
..+||||||+|++|+++|+.|++ |.+|+||||+...
T Consensus 3 ~~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~ 39 (397)
T 2oln_A 3 ESYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFF 39 (397)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 46999999999999999999999 9999999998653
No 33
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.98 E-value=6e-10 Score=114.24 Aligned_cols=37 Identities=38% Similarity=0.545 Sum_probs=33.7
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
+.+|||||||+|++|+++|..|++ |.+|+|||+++..
T Consensus 2 M~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~ 39 (401)
T 2gqf_A 2 SQYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKI 39 (401)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 457999999999999999999999 9999999998643
No 34
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.97 E-value=3.7e-09 Score=108.57 Aligned_cols=36 Identities=39% Similarity=0.567 Sum_probs=33.1
Q ss_pred CCCccEEEECCCcchHHHHHhhhc--C-CeEEEEeeCCC
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQ--N-ASVLLLERGGS 65 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Lae--g-~~VlvLE~G~~ 65 (557)
..++||||||+|++|+++|++|++ | .+|+|||++..
T Consensus 19 ~~~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~~ 57 (405)
T 2gag_B 19 KKSYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGWL 57 (405)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSST
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCCC
Confidence 457999999999999999999998 8 99999999873
No 35
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.95 E-value=3e-09 Score=116.84 Aligned_cols=35 Identities=31% Similarity=0.325 Sum_probs=32.4
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
..+||||||||++|+++|+.|++ |.+|+|||+...
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~ 306 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRRGWQVTLYCADEA 306 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 45999999999999999999999 999999999754
No 36
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.93 E-value=2.1e-09 Score=118.19 Aligned_cols=37 Identities=32% Similarity=0.402 Sum_probs=33.4
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
..++||||||||.+|+++|+.|++ |.+|+|||++...
T Consensus 262 ~~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~ 299 (689)
T 3pvc_A 262 TRCDDIAIIGGGIVSALTALALQRRGAVVTLYCADAQP 299 (689)
T ss_dssp SCCSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSST
T ss_pred CCCCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCcc
Confidence 346999999999999999999999 9999999998543
No 37
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.93 E-value=7.4e-10 Score=112.93 Aligned_cols=42 Identities=31% Similarity=0.495 Sum_probs=34.3
Q ss_pred cccCCCCCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 24 ATAAQPVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 24 ~~~~~~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
+.....+.+|||||||+|++|+++|+.|++ |.+|+|||++..
T Consensus 9 ~~~~~~~~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~ 51 (382)
T 1ryi_A 9 ARIRAMKRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTM 51 (382)
T ss_dssp -----CCSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSST
T ss_pred HHhhccCCCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 344555667999999999999999999999 999999999854
No 38
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.93 E-value=3.3e-09 Score=119.25 Aligned_cols=59 Identities=17% Similarity=0.161 Sum_probs=44.2
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCCeeEEeeecCCceEEEEccCCcCchHHHHhhc
Q 008675 203 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277 (557)
Q Consensus 203 ~l~~~~~~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~v~~~~~aa~~VIlaaGa~~sp~lLl~Sg 277 (557)
+...+++.|++|+++++|++|..+++ ++++|++. +| ++. ++.||+|+|+ .|+.|+...|
T Consensus 157 L~~~a~~~Gv~i~~~t~V~~i~~~~~-----~v~~V~t~--~G---~i~-----Ad~VV~AaG~-~s~~l~~~~g 215 (830)
T 1pj5_A 157 LIKRTESAGVTYRGSTTVTGIEQSGG-----RVTGVQTA--DG---VIP-----ADIVVSCAGF-WGAKIGAMIG 215 (830)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEETT-----EEEEEEET--TE---EEE-----CSEEEECCGG-GHHHHHHTTT
T ss_pred HHHHHHHcCCEEECCceEEEEEEeCC-----EEEEEEEC--Cc---EEE-----CCEEEECCcc-chHHHHHHhC
Confidence 33455667999999999999998765 77777653 44 343 7899999998 4677776655
No 39
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.92 E-value=3.9e-09 Score=110.66 Aligned_cols=30 Identities=30% Similarity=0.453 Sum_probs=29.4
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
||||||||++|+++|.+|++ |.+|+|||++
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 89999999999999999998 9999999998
No 40
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.89 E-value=7.1e-09 Score=105.83 Aligned_cols=37 Identities=24% Similarity=0.522 Sum_probs=33.7
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
|++|||||||||++|+++|..|++ |.+|+||||.+..
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~ 39 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSST
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 356999999999999999999999 9999999997643
No 41
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.85 E-value=1e-08 Score=104.85 Aligned_cols=36 Identities=25% Similarity=0.521 Sum_probs=33.1
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
.+|||||||+|++|+++|..|++ |.+|+|||+....
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~ 39 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSST
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 46999999999999999999999 9999999998643
No 42
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.83 E-value=1.4e-08 Score=105.78 Aligned_cols=34 Identities=32% Similarity=0.680 Sum_probs=31.8
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-C-CeEEEEeeC
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQ-N-ASVLLLERG 63 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Lae-g-~~VlvLE~G 63 (557)
+..|||||||+|++|+++|++|++ | .+|+|||+.
T Consensus 21 m~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~ 56 (448)
T 3axb_A 21 MPRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAG 56 (448)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESS
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccC
Confidence 367999999999999999999999 9 999999993
No 43
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.82 E-value=2.6e-08 Score=101.66 Aligned_cols=35 Identities=26% Similarity=0.537 Sum_probs=32.7
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
+|||||||+|++|+.+|+.|++ |.+|+|||++...
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~ 38 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPP 38 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 6899999999999999999999 9999999998653
No 44
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.82 E-value=2.4e-08 Score=97.31 Aligned_cols=36 Identities=33% Similarity=0.573 Sum_probs=32.7
Q ss_pred CCccEEEECCCcchHHHHHhhhc--CCeEEEEeeCCCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSP 66 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae--g~~VlvLE~G~~~ 66 (557)
.+|||||||+|++|+.+|..|++ |.+|+|||+....
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~ 75 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSP 75 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSC
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCC
Confidence 46899999999999999999998 8999999998643
No 45
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.78 E-value=2.7e-09 Score=112.99 Aligned_cols=59 Identities=14% Similarity=0.156 Sum_probs=40.5
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCCeeEEeeecCCceEEEEccCCcCchHHHHh
Q 008675 203 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLML 275 (557)
Q Consensus 203 ~l~~~~~~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~v~~~~~aa~~VIlaaGa~~sp~lLl~ 275 (557)
+...+++.|.+|+++++|++|+.+++ +++||++. +|++ +. ++.||++++...+-+.|+-
T Consensus 227 L~~~~~~~Gg~I~~~~~V~~I~~~~~-----~~~gV~~~--~g~~--~~-----ad~VV~~a~~~~~~~~Ll~ 285 (501)
T 4dgk_A 227 MIKLFQDLGGEVVLNARVSHMETTGN-----KIEAVHLE--DGRR--FL-----TQAVASNADVVHTYRDLLS 285 (501)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEETT-----EEEEEEET--TSCE--EE-----CSCEEECCC----------
T ss_pred HHHHHHHhCCceeeecceeEEEeeCC-----eEEEEEec--CCcE--EE-----cCEEEECCCHHHHHHHhcc
Confidence 44556678999999999999999987 99999986 5754 32 6889999998888776653
No 46
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.77 E-value=1.8e-08 Score=104.24 Aligned_cols=57 Identities=18% Similarity=0.166 Sum_probs=44.1
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCCeeEEeeecCCceEEEEccCCcCchHHHH
Q 008675 203 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 274 (557)
Q Consensus 203 ~l~~~~~~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~v~~~~~aa~~VIlaaGa~~sp~lLl 274 (557)
+...+++.|++|++++.|++|..+++ +++||.+ +|+ ++. ++.||+|+++..+.+||.
T Consensus 202 l~~~~~~~G~~i~~~~~V~~i~~~~~-----~~~gv~~---~g~--~~~-----ad~VV~a~~~~~~~~ll~ 258 (425)
T 3ka7_A 202 LETVISANGGKIHTGQEVSKILIENG-----KAAGIIA---DDR--IHD-----ADLVISNLGHAATAVLCS 258 (425)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEETT-----EEEEEEE---TTE--EEE-----CSEEEECSCHHHHHHHTT
T ss_pred HHHHHHHcCCEEEECCceeEEEEECC-----EEEEEEE---CCE--EEE-----CCEEEECCCHHHHHHhcC
Confidence 34455667999999999999999876 8888875 353 343 689999999988877653
No 47
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.77 E-value=3.6e-08 Score=104.53 Aligned_cols=54 Identities=24% Similarity=0.294 Sum_probs=44.0
Q ss_pred hhcCCCCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCCeeEEeeecCCceEEEEccCCcC
Q 008675 205 EYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALG 268 (557)
Q Consensus 205 ~~~~~~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~v~~~~~aa~~VIlaaGa~~ 268 (557)
..+.+.|++|+.+++|++|..+++ ++++|.+.+.+|+..++. ++.||.|+|...
T Consensus 119 ~~a~~~Gv~i~~~~~V~~v~~~~~-----~v~gv~~~~~dG~~~~i~-----ad~VI~AdG~~S 172 (512)
T 3e1t_A 119 RNSERKGVDVRERHEVIDVLFEGE-----RAVGVRYRNTEGVELMAH-----ARFIVDASGNRT 172 (512)
T ss_dssp HHHHHTTCEEESSCEEEEEEEETT-----EEEEEEEECSSSCEEEEE-----EEEEEECCCTTC
T ss_pred HHHHhCCCEEEcCCEEEEEEEECC-----EEEEEEEEeCCCCEEEEE-----cCEEEECCCcch
Confidence 345557999999999999998776 899999987678655665 799999999743
No 48
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.76 E-value=1.3e-08 Score=106.23 Aligned_cols=55 Identities=18% Similarity=0.263 Sum_probs=42.9
Q ss_pred hhhcCCCCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEeC-CCCeeEEeeecCCceEEEEccCCcC
Q 008675 204 LEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALG 268 (557)
Q Consensus 204 l~~~~~~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~-~g~~~~v~~~~~aa~~VIlaaGa~~ 268 (557)
+..+.+.|++|+.+++|++|..+++ +++||.+.+. +|+..++. ++.||.|.|+..
T Consensus 107 ~~~a~~~gv~i~~~~~v~~i~~~~~-----~v~gv~~~~~~~G~~~~~~-----ad~VV~AdG~~s 162 (453)
T 3atr_A 107 LKEAQDRGVEIWDLTTAMKPIFEDG-----YVKGAVLFNRRTNEELTVY-----SKVVVEATGYSR 162 (453)
T ss_dssp HHHHHHTTCEEESSEEEEEEEEETT-----EEEEEEEEETTTTEEEEEE-----CSEEEECCGGGC
T ss_pred HHHHHHcCCEEEeCcEEEEEEEECC-----EEEEEEEEEcCCCceEEEE-----cCEEEECcCCch
Confidence 3444557999999999999998766 8899998764 56555554 799999999743
No 49
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.75 E-value=4.5e-08 Score=99.24 Aligned_cols=35 Identities=31% Similarity=0.536 Sum_probs=32.7
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
+|||||||+|++|+++|+.|++ |.+|+|||++...
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~ 37 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPP 37 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 5899999999999999999999 9999999998654
No 50
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.75 E-value=1.2e-08 Score=108.04 Aligned_cols=37 Identities=27% Similarity=0.284 Sum_probs=33.5
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
...+||||||+|++|+++|+.|++ |++|+|||++...
T Consensus 105 ~~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~ 142 (549)
T 3nlc_A 105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEV 142 (549)
T ss_dssp TCCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcc
Confidence 345899999999999999999999 9999999999643
No 51
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.72 E-value=6.3e-08 Score=95.68 Aligned_cols=35 Identities=29% Similarity=0.493 Sum_probs=32.4
Q ss_pred CCccEEEECCCcchHHHHHhhhc---CCeEEEEeeCCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGS 65 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae---g~~VlvLE~G~~ 65 (557)
.+|||||||+|++|+.+|..|++ |.+|+|||++..
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~ 115 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVA 115 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSS
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCc
Confidence 46999999999999999999998 899999999864
No 52
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.71 E-value=6.4e-08 Score=100.30 Aligned_cols=41 Identities=34% Similarity=0.498 Sum_probs=36.6
Q ss_pred CCCCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCCCC
Q 008675 28 QPVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYG 68 (557)
Q Consensus 28 ~~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~~~ 68 (557)
.+++.|||||||+|.+|+++|++|++ |++|+|||+++...+
T Consensus 16 ~~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg 57 (475)
T 3p1w_A 16 FQGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGG 57 (475)
T ss_dssp -CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred cccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCC
Confidence 45668999999999999999999999 999999999987654
No 53
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.70 E-value=6.8e-08 Score=99.66 Aligned_cols=35 Identities=26% Similarity=0.398 Sum_probs=32.6
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
.+|||||||||++|+++|..|++ |.+|+|||+...
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~ 39 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKF 39 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCS
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 35999999999999999999999 999999999864
No 54
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.68 E-value=5.2e-08 Score=104.57 Aligned_cols=39 Identities=33% Similarity=0.490 Sum_probs=34.4
Q ss_pred CCCCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 28 QPVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 28 ~~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
.++..+||||||||++|+++|..|++ |.+|+|||+....
T Consensus 19 ~~M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~ 58 (591)
T 3i3l_A 19 SHMTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFP 58 (591)
T ss_dssp -CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred CcCCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCC
Confidence 44567999999999999999999999 9999999998643
No 55
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.57 E-value=1e-07 Score=98.43 Aligned_cols=36 Identities=22% Similarity=0.424 Sum_probs=32.7
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYG 68 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~~~ 68 (557)
.||||||||++|+++|++|++ |.+|+||||.+...+
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG 37 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGG 37 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCc
Confidence 389999999999999999999 999999999876543
No 56
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.54 E-value=1.9e-07 Score=93.76 Aligned_cols=35 Identities=29% Similarity=0.485 Sum_probs=32.4
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
..|||+|||+|++|+.+|..|++ |.+|+|+|+.+.
T Consensus 2 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~ 37 (357)
T 4a9w_A 2 DSVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEAS 37 (357)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 35899999999999999999999 999999999864
No 57
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.53 E-value=2.2e-06 Score=84.62 Aligned_cols=61 Identities=18% Similarity=0.245 Sum_probs=46.8
Q ss_pred hcCCCCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEe-CCCCeeEEeeecCCceEEEEccCCcCchHHHHhhc
Q 008675 206 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277 (557)
Q Consensus 206 ~~~~~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~-~~g~~~~v~~~~~aa~~VIlaaGa~~sp~lLl~Sg 277 (557)
..++.|+++++++.|++|..+ + ++.+|++.+ .+|+..++. ++.||+|+|..-+..+|..+|
T Consensus 199 ~~~~~gv~~~~~~~v~~i~~~-~-----~~~~v~~~~~~~g~~~~~~-----~D~vv~a~G~~p~~~~~~~~g 260 (323)
T 3f8d_A 199 VKKKPNVEFVLNSVVKEIKGD-K-----VVKQVVVENLKTGEIKELN-----VNGVFIEIGFDPPTDFAKSNG 260 (323)
T ss_dssp HHTCTTEEEECSEEEEEEEES-S-----SEEEEEEEETTTCCEEEEE-----CSEEEECCCEECCHHHHHHTT
T ss_pred HHhCCCcEEEeCCEEEEEecc-C-----ceeEEEEEECCCCceEEEE-----cCEEEEEECCCCChhHHhhcC
Confidence 345569999999999999765 3 677888886 346655554 799999999877767877776
No 58
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.51 E-value=6.4e-07 Score=87.97 Aligned_cols=36 Identities=28% Similarity=0.527 Sum_probs=32.3
Q ss_pred CCccEEEECCCcchHHHHHhhhc---CCeEEEEeeCCCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGSP 66 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae---g~~VlvLE~G~~~ 66 (557)
.+|||+|||+|++|+.+|..|++ |.+|+|+|+....
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ 102 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccc
Confidence 46799999999999999999997 7999999998643
No 59
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.50 E-value=2.3e-07 Score=99.74 Aligned_cols=56 Identities=23% Similarity=0.349 Sum_probs=42.3
Q ss_pred hhcCCCCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEe----CCCCe-------eEEeeecCCceEEEEccCCcCc
Q 008675 205 EYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD----ATGAK-------HRAYLKNGPKNEIIVSAGALGS 269 (557)
Q Consensus 205 ~~~~~~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~----~~g~~-------~~v~~~~~aa~~VIlaaGa~~s 269 (557)
..+++.|++|+.++.|++|+.++++ +++||.+.+ .+|+. .++. ++.||+|.|+...
T Consensus 152 ~~a~~~Gv~i~~g~~v~~l~~~~~g----~V~gV~~~~~g~~~~G~~~~~~~~g~~i~-----Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 152 EQAEALGVEVYPGYAAAEILFHEDG----SVKGIATNDVGIQKDGAPKTTFERGLELH-----AKVTIFAEGCHGH 218 (584)
T ss_dssp HHHHHTTCEEETTCCEEEEEECTTS----SEEEEEECCEEECTTSCEEEEEECCCEEE-----CSEEEECCCTTCH
T ss_pred HHHHHcCCEEEcCCEEEEEEEcCCC----CEEEEEeCCccccCCCCcccccCCceEEE-----CCEEEEeeCCCch
Confidence 4555569999999999999988753 788998763 34532 3454 7999999998665
No 60
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.49 E-value=3.1e-07 Score=97.71 Aligned_cols=34 Identities=26% Similarity=0.480 Sum_probs=32.0
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
..|||||||||+||+.+|..|++ |.+|+|||++.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~ 60 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNA 60 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecc
Confidence 46999999999999999999999 99999999974
No 61
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.48 E-value=4e-07 Score=91.11 Aligned_cols=33 Identities=21% Similarity=0.376 Sum_probs=30.4
Q ss_pred ccEEEECCCcchHHHHHhhhc----CCeEEEEeeCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ----NASVLLLERGGS 65 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae----g~~VlvLE~G~~ 65 (557)
+||||||+|++|+++|+.|++ |.+|+|+||+..
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~ 38 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADD 38 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCC
Confidence 699999999999999999987 689999999864
No 62
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.47 E-value=9.7e-07 Score=93.06 Aligned_cols=41 Identities=32% Similarity=0.348 Sum_probs=34.7
Q ss_pred cCCCCCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 26 AAQPVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 26 ~~~~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
+..+..++||||||+|++|+++|..|++ |.+|+||||....
T Consensus 5 ~~~~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~ 46 (500)
T 2qa1_A 5 HHHHRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVER 46 (500)
T ss_dssp ---CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-
T ss_pred cCCccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 3456778999999999999999999999 9999999998643
No 63
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.45 E-value=4.1e-07 Score=97.15 Aligned_cols=34 Identities=38% Similarity=0.558 Sum_probs=32.1
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
.+|||||||||+||+.+|..|++ |.+|+|||++.
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 61 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNI 61 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecc
Confidence 47999999999999999999999 99999999974
No 64
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.45 E-value=1.6e-06 Score=92.44 Aligned_cols=36 Identities=28% Similarity=0.435 Sum_probs=33.3
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
.++||||||+|++|+++|..|++ |.+|+||||....
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~ 40 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGL 40 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSC
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 46999999999999999999999 9999999998653
No 65
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.44 E-value=1.6e-07 Score=96.40 Aligned_cols=36 Identities=42% Similarity=0.713 Sum_probs=32.3
Q ss_pred CCccEEEECCCcchHHHHHhhhc---CCeEEEEeeCCCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGSP 66 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae---g~~VlvLE~G~~~ 66 (557)
..+||||||+|++|+++|+.|++ |.+|+|||++...
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~ 73 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLP 73 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSS
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 35999999999999999999987 7999999998543
No 66
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.42 E-value=3.9e-07 Score=90.81 Aligned_cols=35 Identities=29% Similarity=0.401 Sum_probs=32.3
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
.+||||||+|++|+++|..|++ |.+|+||||....
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~ 37 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 4799999999999999999999 9999999998643
No 67
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.39 E-value=3.2e-07 Score=98.22 Aligned_cols=36 Identities=33% Similarity=0.531 Sum_probs=31.2
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
.+|||||||+|++|+++|..|++ |.+|+|||+....
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~ 84 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEP 84 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCC
Confidence 46999999999999999999999 9999999998653
No 68
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.39 E-value=1.5e-06 Score=91.51 Aligned_cols=39 Identities=31% Similarity=0.379 Sum_probs=33.4
Q ss_pred CCCCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 28 QPVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 28 ~~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
....++||||||+|++|+++|..|++ |.+|+|||+....
T Consensus 8 ~~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~ 47 (499)
T 2qa2_A 8 HHRSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQR 47 (499)
T ss_dssp ---CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSC
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 44567999999999999999999999 9999999997543
No 69
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.36 E-value=4.3e-07 Score=90.40 Aligned_cols=56 Identities=5% Similarity=0.103 Sum_probs=42.5
Q ss_pred CCCCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEeC-CCCeeEEeeecCCceEEEEccCCcCchHHH
Q 008675 208 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQLL 273 (557)
Q Consensus 208 ~~~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~-~g~~~~v~~~~~aa~~VIlaaGa~~sp~lL 273 (557)
+..|+++++++.|++|..+++ ++++|++.+. +|+..++. ++.||+|+|..-++.++
T Consensus 220 ~~~gv~i~~~~~v~~i~~~~~-----~~~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~~ 276 (338)
T 3itj_A 220 KNEKIEILYNTVALEAKGDGK-----LLNALRIKNTKKNEETDLP-----VSGLFYAIGHTPATKIV 276 (338)
T ss_dssp HCTTEEEECSEEEEEEEESSS-----SEEEEEEEETTTTEEEEEE-----CSEEEECSCEEECCGGG
T ss_pred hcCCeEEeecceeEEEEcccC-----cEEEEEEEECCCCceEEEE-----eCEEEEEeCCCCChhHh
Confidence 345999999999999987665 7889999863 35445554 79999999976555544
No 70
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.34 E-value=1.4e-06 Score=92.96 Aligned_cols=37 Identities=30% Similarity=0.574 Sum_probs=32.2
Q ss_pred CCCCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 28 QPVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 28 ~~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
.....|||||||||.||+.+|..|++ |.+|+|||+..
T Consensus 17 ~~~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 54 (641)
T 3cp8_A 17 RGSHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDL 54 (641)
T ss_dssp ---CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred cccCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecc
Confidence 34557999999999999999999999 99999999974
No 71
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.32 E-value=2.2e-07 Score=89.30 Aligned_cols=35 Identities=29% Similarity=0.401 Sum_probs=32.8
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
++||+|||||++|+++|+.|++ |.+|+||||.+.+
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 5899999999999999999999 9999999998654
No 72
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.32 E-value=1.5e-06 Score=89.43 Aligned_cols=59 Identities=19% Similarity=0.184 Sum_probs=46.7
Q ss_pred hhcCCCCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCCeeEEeeecCCceEEEEccCCcCchHHHHhhc
Q 008675 205 EYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277 (557)
Q Consensus 205 ~~~~~~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~v~~~~~aa~~VIlaaGa~~sp~lLl~Sg 277 (557)
...++.|+++++++.|++|..+++ ++++|++. +|+. +. ++.||+|+|..-...+|..+|
T Consensus 202 ~~l~~~GV~i~~~~~v~~i~~~~~-----~v~~v~l~--dG~~--i~-----aD~Vv~a~G~~p~~~l~~~~g 260 (415)
T 3lxd_A 202 AEHRAHGVDLRTGAAMDCIEGDGT-----KVTGVRMQ--DGSV--IP-----ADIVIVGIGIVPCVGALISAG 260 (415)
T ss_dssp HHHHHTTCEEEETCCEEEEEESSS-----BEEEEEES--SSCE--EE-----CSEEEECSCCEESCHHHHHTT
T ss_pred HHHHhCCCEEEECCEEEEEEecCC-----cEEEEEeC--CCCE--EE-----cCEEEECCCCccChHHHHhCC
Confidence 345567999999999999987655 78888875 5643 33 799999999887777887777
No 73
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.32 E-value=1.6e-06 Score=88.78 Aligned_cols=35 Identities=29% Similarity=0.409 Sum_probs=32.4
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
..+||||||+|++|+++|..|++ |.+|+|||+...
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~ 40 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARR 40 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 35899999999999999999999 999999999854
No 74
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.31 E-value=4.3e-07 Score=95.73 Aligned_cols=37 Identities=24% Similarity=0.408 Sum_probs=33.8
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 29 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 29 ~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
....+||+|||||++|+.+|..|++ |.+|+|||+.+.
T Consensus 89 ~~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~ 126 (497)
T 2bry_A 89 ACTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIK 126 (497)
T ss_dssp TTTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSS
T ss_pred ccCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccc
Confidence 4457999999999999999999999 999999999864
No 75
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.30 E-value=5e-06 Score=84.92 Aligned_cols=35 Identities=23% Similarity=0.326 Sum_probs=32.5
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
..+||+|||+|++|+++|..|++ |.+|+|+|+.+.
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 39 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQ 39 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 46899999999999999999999 999999999854
No 76
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.25 E-value=3.5e-06 Score=87.96 Aligned_cols=36 Identities=31% Similarity=0.412 Sum_probs=33.2
Q ss_pred CCccEEEECCCcchHHHHHhhhc-C-----CeEEEEeeCCCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ-N-----ASVLLLERGGSP 66 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae-g-----~~VlvLE~G~~~ 66 (557)
..|||||||+|++|+.+|..|++ | .+|+|||+.+..
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~ 70 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDY 70 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCC
Confidence 56999999999999999999999 8 999999998753
No 77
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.25 E-value=6.2e-06 Score=85.70 Aligned_cols=37 Identities=41% Similarity=0.547 Sum_probs=33.4
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CC--eEEEEeeCCCC
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQ-NA--SVLLLERGGSP 66 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Lae-g~--~VlvLE~G~~~ 66 (557)
+..+||+|||||++|+++|..|++ |. +|+|+|+....
T Consensus 4 ~~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~ 43 (447)
T 2gv8_A 4 PTIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSP 43 (447)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSS
T ss_pred CCCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCC
Confidence 346899999999999999999999 98 99999998654
No 78
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.24 E-value=4.3e-07 Score=89.30 Aligned_cols=37 Identities=24% Similarity=0.502 Sum_probs=31.7
Q ss_pred CCCCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 28 QPVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 28 ~~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
..|+.|||||||||+||+++|.+|++ |++|+|+|++.
T Consensus 2 n~M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~ 39 (304)
T 4fk1_A 2 NAMKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT 39 (304)
T ss_dssp ----CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CCCCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 45778999999999999999999999 99999999974
No 79
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.22 E-value=3.1e-06 Score=84.23 Aligned_cols=36 Identities=17% Similarity=0.197 Sum_probs=32.9
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
+..|||+|||+|++|+.+|..|++ |.+|+|+|+.+.
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~ 39 (335)
T 2zbw_A 3 ADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPE 39 (335)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 356999999999999999999999 999999999754
No 80
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.22 E-value=1.9e-06 Score=91.71 Aligned_cols=37 Identities=22% Similarity=0.380 Sum_probs=33.1
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
...+||||||+|++|+.+|.+|++ |.+|+|||+++..
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~ 56 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGV 56 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 456999999999999999999999 9999999998643
No 81
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.20 E-value=1.8e-06 Score=91.74 Aligned_cols=36 Identities=19% Similarity=0.387 Sum_probs=32.8
Q ss_pred CCccEEEECCCcchHHHHHhhh-c-CCeEEEEeeCCCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLS-Q-NASVLLLERGGSP 66 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~La-e-g~~VlvLE~G~~~ 66 (557)
..+||||||+|++|+.+|.+|+ + |.+|+|||+.+..
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~ 44 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGP 44 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCC
Confidence 4699999999999999999999 8 9999999998643
No 82
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.19 E-value=7.4e-06 Score=83.90 Aligned_cols=59 Identities=14% Similarity=0.250 Sum_probs=46.8
Q ss_pred hhcCCCCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCCeeEEeeecCCceEEEEccCCcCchHHHHhhc
Q 008675 205 EYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277 (557)
Q Consensus 205 ~~~~~~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~v~~~~~aa~~VIlaaGa~~sp~lLl~Sg 277 (557)
...++.|+++++++.|++|..+++ ++++|++. +|+. +. ++.||+|+|..-+..++..+|
T Consensus 192 ~~l~~~GV~i~~~~~v~~i~~~~~-----~v~~V~~~--dG~~--i~-----aD~Vv~a~G~~p~~~l~~~~g 250 (404)
T 3fg2_P 192 DRHSGAGIRMHYGVRATEIAAEGD-----RVTGVVLS--DGNT--LP-----CDLVVVGVGVIPNVEIAAAAG 250 (404)
T ss_dssp HHHHHTTCEEECSCCEEEEEEETT-----EEEEEEET--TSCE--EE-----CSEEEECCCEEECCHHHHHTT
T ss_pred HHHHhCCcEEEECCEEEEEEecCC-----cEEEEEeC--CCCE--EE-----cCEEEECcCCccCHHHHHhCC
Confidence 345668999999999999987765 78888875 5653 33 799999999877777887777
No 83
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.18 E-value=4.6e-06 Score=84.14 Aligned_cols=34 Identities=38% Similarity=0.587 Sum_probs=31.9
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CC-eEEEEeeCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGG 64 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae-g~-~VlvLE~G~ 64 (557)
..|||+|||+|++|+.+|.+|++ |. +|+|||+..
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~ 38 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT 38 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC
Confidence 36999999999999999999999 98 999999986
No 84
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.17 E-value=2.8e-06 Score=90.53 Aligned_cols=37 Identities=24% Similarity=0.360 Sum_probs=33.6
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
...+||||||+|++|+.+|.+|++ |.+|+|||+++..
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~ 51 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDV 51 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 347999999999999999999999 9999999998653
No 85
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.14 E-value=1.2e-05 Score=79.03 Aligned_cols=58 Identities=19% Similarity=0.121 Sum_probs=44.8
Q ss_pred cCCCCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCCeeEEeeecCCceEEEEccCCcCchHHHH
Q 008675 207 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 274 (557)
Q Consensus 207 ~~~~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~v~~~~~aa~~VIlaaGa~~sp~lLl 274 (557)
.++.|+++++++.|++|..+++ ++.+|++...+|+..++. ++.||+|+|..-.+.++.
T Consensus 193 ~~~~gv~~~~~~~v~~i~~~~~-----~~~~v~~~~~~g~~~~~~-----~D~vv~a~G~~p~~~~~~ 250 (315)
T 3r9u_A 193 KKNEKIELITSASVDEVYGDKM-----GVAGVKVKLKDGSIRDLN-----VPGIFTFVGLNVRNEILK 250 (315)
T ss_dssp HHCTTEEEECSCEEEEEEEETT-----EEEEEEEECTTSCEEEEC-----CSCEEECSCEEECCGGGB
T ss_pred HhcCCeEEEeCcEEEEEEcCCC-----cEEEEEEEcCCCCeEEee-----cCeEEEEEcCCCCchhhh
Confidence 3567999999999999987765 888998875567655553 799999999765555543
No 86
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.14 E-value=1.1e-05 Score=86.03 Aligned_cols=35 Identities=31% Similarity=0.530 Sum_probs=32.7
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
.++||||||+|++|+++|..|++ |.+|+||||...
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~ 60 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDG 60 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 46899999999999999999999 999999999864
No 87
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.12 E-value=1.1e-06 Score=86.77 Aligned_cols=34 Identities=38% Similarity=0.551 Sum_probs=31.9
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
.+|||||||||+||+.+|.+|++ |++|+|+|++.
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~ 39 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGI 39 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 37999999999999999999999 99999999874
No 88
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.12 E-value=4.5e-06 Score=82.69 Aligned_cols=34 Identities=38% Similarity=0.404 Sum_probs=31.9
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
.+||+|||+|++|+.+|..|++ |.+|+|+|+.+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~ 41 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQ 41 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCC
Confidence 5899999999999999999999 999999999864
No 89
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.12 E-value=2.9e-06 Score=90.21 Aligned_cols=37 Identities=30% Similarity=0.391 Sum_probs=33.5
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
+..+||||||+|++|+.+|.+|++ |.+|+|||+++..
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~ 44 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDV 44 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 456999999999999999999999 9999999998643
No 90
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.11 E-value=9.2e-07 Score=87.16 Aligned_cols=36 Identities=25% Similarity=0.239 Sum_probs=32.8
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 29 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 29 ~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
|++.||+||||+|+||+.+|.+|++ |++|+|+|++.
T Consensus 1 M~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~ 37 (314)
T 4a5l_A 1 MSNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFM 37 (314)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 4567999999999999999999999 99999999975
No 91
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.08 E-value=1.4e-05 Score=83.46 Aligned_cols=34 Identities=18% Similarity=0.315 Sum_probs=30.7
Q ss_pred ccEEEECCCcchHHHHHhhhc----CCe---EEEEeeCCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ----NAS---VLLLERGGSP 66 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae----g~~---VlvLE~G~~~ 66 (557)
+||+|||||++|+++|..|++ |.+ |+|+|+.+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~ 43 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADW 43 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSS
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCC
Confidence 699999999999999999986 788 9999998654
No 92
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.02 E-value=2.1e-06 Score=85.24 Aligned_cols=37 Identities=27% Similarity=0.477 Sum_probs=32.9
Q ss_pred CCccEEEECCCcchHHHHHhhhc---CCeEEEEeeCCCCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGSPY 67 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae---g~~VlvLE~G~~~~ 67 (557)
.++||+|||||+||+++|++|++ |++|+|+|++..+.
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~G 103 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPG 103 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCC
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCC
Confidence 46899999999999999999974 89999999987543
No 93
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.01 E-value=2.6e-06 Score=88.67 Aligned_cols=42 Identities=29% Similarity=0.452 Sum_probs=37.5
Q ss_pred CCCCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCCCCC
Q 008675 28 QPVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYGN 69 (557)
Q Consensus 28 ~~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~~~~ 69 (557)
.++.+|||||||+|.+|+++|.+|++ |++|+|||+.+...+.
T Consensus 7 ~~~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~ 49 (453)
T 2bcg_G 7 TIDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGE 49 (453)
T ss_dssp CCCCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred hccccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCcc
Confidence 35567999999999999999999999 9999999999877653
No 94
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.99 E-value=2.2e-06 Score=90.66 Aligned_cols=39 Identities=28% Similarity=0.457 Sum_probs=35.1
Q ss_pred CCCccEEEECCCcchHHHHHhhhc--CCeEEEEeeCCCCCC
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSPYG 68 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Lae--g~~VlvLE~G~~~~~ 68 (557)
+..+||||||||++|+++|++|++ |.+|+|||+.+...+
T Consensus 8 ~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG 48 (513)
T 4gde_A 8 DISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGG 48 (513)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCG
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcC
Confidence 446999999999999999999987 899999999987654
No 95
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.93 E-value=4.2e-06 Score=85.79 Aligned_cols=42 Identities=21% Similarity=0.166 Sum_probs=32.9
Q ss_pred ccCCCCCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 25 TAAQPVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 25 ~~~~~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
......+.|||||||+|++|+++|..|++ |.+|+||||....
T Consensus 16 ~~~~~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~ 58 (407)
T 3rp8_A 16 ENLYFQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEI 58 (407)
T ss_dssp -------CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC
T ss_pred CcccCCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 33445567999999999999999999999 9999999998643
No 96
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.92 E-value=5e-06 Score=83.77 Aligned_cols=37 Identities=27% Similarity=0.312 Sum_probs=34.0
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 29 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 29 ~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
|..++||||||+|++|+++|++|++ |.+|+|||++..
T Consensus 3 m~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~ 40 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLP 40 (363)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCC
Confidence 4567999999999999999999999 999999999864
No 97
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=97.88 E-value=6.1e-06 Score=77.58 Aligned_cols=34 Identities=32% Similarity=0.427 Sum_probs=32.0
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
.+|||||||+|++|+.+|..|++ |.+|+|||++.
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~ 36 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSL 36 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 46999999999999999999999 99999999983
No 98
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=97.82 E-value=6.4e-06 Score=85.07 Aligned_cols=35 Identities=43% Similarity=0.647 Sum_probs=32.3
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPY 67 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~~ 67 (557)
|||||||||++|+++|++|++ |.+|+|||+.+...
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~G 37 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLG 37 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSB
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCcc
Confidence 899999999999999999999 99999999976543
No 99
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.80 E-value=1.2e-05 Score=82.07 Aligned_cols=39 Identities=33% Similarity=0.454 Sum_probs=34.4
Q ss_pred CCCCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 28 QPVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 28 ~~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
.++..+||||||+|++|+++|..|++ |.+|+|||+.+..
T Consensus 22 ~~~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 61 (398)
T 2xdo_A 22 NLLSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDR 61 (398)
T ss_dssp -CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSST
T ss_pred cccCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCc
Confidence 34567999999999999999999999 9999999998643
No 100
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.79 E-value=9.6e-06 Score=83.20 Aligned_cols=38 Identities=32% Similarity=0.359 Sum_probs=32.6
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CCe-EEEEeeCCCC
Q 008675 29 PVSYYDYIIIGGGTAGCPLAATLSQ-NAS-VLLLERGGSP 66 (557)
Q Consensus 29 ~~~~~DvIIVGsG~aG~~~A~~Lae-g~~-VlvLE~G~~~ 66 (557)
|+..+||||||+|++|+++|..|++ |.+ |+|||+....
T Consensus 1 M~~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~ 40 (410)
T 3c96_A 1 MSEPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEI 40 (410)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSC
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCc
Confidence 3457999999999999999999999 999 9999998643
No 101
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.77 E-value=1.1e-05 Score=85.56 Aligned_cols=46 Identities=33% Similarity=0.453 Sum_probs=35.3
Q ss_pred ccccccccCCCCCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 19 SFMHNATAAQPVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 19 ~~~~~~~~~~~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
++|......+++..|||||||+|+||+.+|.+|++ |.+|+|+|+.+
T Consensus 19 ~~m~~~~~~~~~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 19 SHMNGPEDLPKSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp -------CCCSSCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCcccccCcCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 34444444556678999999999999999999999 99999999954
No 102
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.76 E-value=3.4e-05 Score=81.22 Aligned_cols=62 Identities=15% Similarity=0.116 Sum_probs=40.7
Q ss_pred HHHhhh-hcCCCCcEEEcCcEEEEEEEecCCCC--CCeEEEEEEEeC-CCCeeEEeeecCCceEEEEccCC
Q 008675 200 AADLLE-YANPSGLTLLLHASVHKVLFRIKGKA--RPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGA 266 (557)
Q Consensus 200 ~~~~l~-~~~~~n~~i~~~~~V~~i~~~~~~~~--~~~~~gV~~~~~-~g~~~~v~~~~~aa~~VIlaaGa 266 (557)
...|+. .+++-+..|+.+++|++|..++.... ....--|++.+. .|+..++. ++.||+|+|.
T Consensus 147 ~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~-----ar~vVlatG~ 212 (501)
T 4b63_A 147 FEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARR-----TRKVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEE-----EEEEEECCCC
T ss_pred HHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEE-----eCEEEECcCC
Confidence 334665 55666778999999999998765311 112345666653 35555554 7999999993
No 103
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.75 E-value=4e-05 Score=78.56 Aligned_cols=57 Identities=18% Similarity=0.124 Sum_probs=43.0
Q ss_pred hcCCCCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCCeeEEeeecCCceEEEEccCCcCchHHHHhhc
Q 008675 206 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277 (557)
Q Consensus 206 ~~~~~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~v~~~~~aa~~VIlaaGa~~sp~lLl~Sg 277 (557)
..++.|+++++++.|++|..++ ++.+|++. +|+. +. ++.||+|+|..-...+|..+|
T Consensus 194 ~l~~~GV~i~~~~~v~~i~~~~------~~~~v~~~--dg~~--i~-----aD~Vv~a~G~~p~~~l~~~~g 250 (410)
T 3ef6_A 194 LLTELGVQVELGTGVVGFSGEG------QLEQVMAS--DGRS--FV-----ADSALICVGAEPADQLARQAG 250 (410)
T ss_dssp HHHHHTCEEECSCCEEEEECSS------SCCEEEET--TSCE--EE-----CSEEEECSCEEECCHHHHHTT
T ss_pred HHHHCCCEEEeCCEEEEEeccC------cEEEEEEC--CCCE--EE-----cCEEEEeeCCeecHHHHHhCC
Confidence 4456799999999999997532 45567764 5653 33 799999999877778887777
No 104
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.75 E-value=1.4e-05 Score=81.67 Aligned_cols=40 Identities=28% Similarity=0.471 Sum_probs=35.5
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc--CCeEEEEeeCCCCCC
Q 008675 29 PVSYYDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSPYG 68 (557)
Q Consensus 29 ~~~~~DvIIVGsG~aG~~~A~~Lae--g~~VlvLE~G~~~~~ 68 (557)
|...+||||||+|.+|+++|++|++ |.+|+|||+.+...+
T Consensus 4 m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG 45 (399)
T 1v0j_A 4 MTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGG 45 (399)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSG
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCC
Confidence 4567999999999999999999998 799999999976543
No 105
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.73 E-value=1.4e-05 Score=80.98 Aligned_cols=40 Identities=35% Similarity=0.543 Sum_probs=35.6
Q ss_pred CCCCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCCC
Q 008675 28 QPVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPY 67 (557)
Q Consensus 28 ~~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~~ 67 (557)
.+...+||+|||+|++|+++|++|++ |.+|+|||+.+...
T Consensus 25 ~~~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~G 65 (397)
T 3hdq_A 25 QESKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIG 65 (397)
T ss_dssp CCCCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSS
T ss_pred ccCCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCC
Confidence 34567999999999999999999999 99999999987654
No 106
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.71 E-value=1.3e-05 Score=79.02 Aligned_cols=36 Identities=28% Similarity=0.501 Sum_probs=32.1
Q ss_pred CCCCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 28 QPVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 28 ~~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
.|+..||++|||+|++|+.+|..|++ |.+|+|+|+.
T Consensus 12 ~m~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 48 (319)
T 3cty_A 12 EKERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKA 48 (319)
T ss_dssp --CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cccCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCC
Confidence 35567999999999999999999999 9999999995
No 107
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.70 E-value=1.6e-05 Score=80.53 Aligned_cols=37 Identities=30% Similarity=0.261 Sum_probs=32.7
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
+..+||||||+|++|+++|..|++ |.+|+|||+....
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~ 46 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSEL 46 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCC
Confidence 346999999999999999999999 9999999998654
No 108
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.69 E-value=1.7e-05 Score=83.09 Aligned_cols=34 Identities=29% Similarity=0.440 Sum_probs=32.4
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
.+|||||||+|++|+++|.+|++ |.+|+|+|++.
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~ 36 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYK 36 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 46999999999999999999999 99999999986
No 109
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.68 E-value=1.7e-05 Score=79.93 Aligned_cols=36 Identities=39% Similarity=0.621 Sum_probs=33.0
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPY 67 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~~ 67 (557)
.||++|||+|++|+++|.+|++ |.+|+|+|+++...
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~G 37 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIG 37 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCC
Confidence 3799999999999999999999 99999999987554
No 110
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.68 E-value=1.7e-05 Score=83.38 Aligned_cols=39 Identities=31% Similarity=0.477 Sum_probs=31.8
Q ss_pred CCCCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 28 QPVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 28 ~~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
+++..|||||||+|++|+++|.+|++ |.+|+|+|+.+..
T Consensus 21 ~~m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~ 60 (491)
T 3urh_A 21 QSMMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTY 60 (491)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred hhcccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 33456999999999999999999999 9999999987543
No 111
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.68 E-value=1.6e-05 Score=84.22 Aligned_cols=39 Identities=28% Similarity=0.467 Sum_probs=34.5
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCCCC
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYG 68 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~~~ 68 (557)
...+||||||||.+|+++|++|++ |.+|+|||+.+...+
T Consensus 2 ~~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG 41 (520)
T 1s3e_A 2 SNKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGG 41 (520)
T ss_dssp -CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBT
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 356899999999999999999999 999999999876543
No 112
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.67 E-value=1.7e-05 Score=83.33 Aligned_cols=34 Identities=24% Similarity=0.340 Sum_probs=31.8
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
..|||||||||++|+++|.+|++ |.+|+|||++.
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~ 59 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEEYR 59 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCCC
Confidence 47999999999999999999999 99999999953
No 113
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.66 E-value=2.4e-05 Score=80.78 Aligned_cols=41 Identities=29% Similarity=0.445 Sum_probs=36.8
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCCCCC
Q 008675 29 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYGN 69 (557)
Q Consensus 29 ~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~~~~ 69 (557)
|...||+||||+|.+|+++|.+|++ |.+|+|||+.....+.
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~ 44 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGE 44 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTT
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCcccc
Confidence 5567999999999999999999999 9999999999876543
No 114
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.64 E-value=1.6e-05 Score=83.07 Aligned_cols=37 Identities=32% Similarity=0.471 Sum_probs=32.9
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
+..||+||||+|++|+++|.+|++ |.+|+|+|+.+..
T Consensus 2 ~~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~ 39 (466)
T 3l8k_A 2 SLKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGEL 39 (466)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSS
T ss_pred CccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCC
Confidence 346999999999999999999999 9999999976543
No 115
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.63 E-value=2.2e-05 Score=79.99 Aligned_cols=34 Identities=29% Similarity=0.414 Sum_probs=31.8
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
+|||||||+|++|+++|..|++ |.+|+|||+...
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 36 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTP 36 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 4899999999999999999999 999999999753
No 116
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.62 E-value=2.5e-05 Score=81.42 Aligned_cols=34 Identities=26% Similarity=0.397 Sum_probs=31.6
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
..|||||||+|++|+++|.+|++ |.+|+|||++.
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~~ 38 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEFR 38 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 36999999999999999999999 99999999943
No 117
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.62 E-value=2.5e-05 Score=81.82 Aligned_cols=41 Identities=24% Similarity=0.418 Sum_probs=33.5
Q ss_pred CCCCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCCCC
Q 008675 28 QPVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYG 68 (557)
Q Consensus 28 ~~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~~~ 68 (557)
+....+||||||||++|+++|+.|++ |.+|+|||+.....+
T Consensus 12 ~~~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GG 53 (478)
T 2ivd_A 12 PRTTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGG 53 (478)
T ss_dssp -----CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBT
T ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCc
Confidence 44567999999999999999999999 999999999876544
No 118
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.61 E-value=2.4e-05 Score=78.59 Aligned_cols=37 Identities=30% Similarity=0.304 Sum_probs=32.9
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 29 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 29 ~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
|+..|||||||+|++|+.+|..|++ |.+|+|||+.+.
T Consensus 11 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~ 48 (360)
T 3ab1_A 11 HHDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQ 48 (360)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 4567999999999999999999999 999999999864
No 119
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.61 E-value=3.2e-05 Score=79.60 Aligned_cols=39 Identities=31% Similarity=0.328 Sum_probs=34.8
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-C-CeEEEEeeCCCCCC
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQ-N-ASVLLLERGGSPYG 68 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Lae-g-~~VlvLE~G~~~~~ 68 (557)
...+||||||||++|+++|++|++ | .+|+|+|+.+...+
T Consensus 4 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG 44 (424)
T 2b9w_A 4 SKDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGG 44 (424)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSST
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCC
Confidence 356899999999999999999999 9 89999999876543
No 120
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.61 E-value=2.5e-05 Score=82.63 Aligned_cols=34 Identities=38% Similarity=0.652 Sum_probs=31.7
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
+||+||||+|+||.++|.++++ |.||+|+|+...
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~ 76 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKP 76 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecccc
Confidence 5999999999999999999999 999999998653
No 121
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.59 E-value=3.5e-05 Score=80.95 Aligned_cols=39 Identities=31% Similarity=0.411 Sum_probs=35.2
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCCCC
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYG 68 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~~~ 68 (557)
...+||||||||++|+++|+.|++ |.+|+|||+.+...+
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG 48 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGG 48 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCC
Confidence 446899999999999999999999 999999999987654
No 122
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.59 E-value=2e-05 Score=83.53 Aligned_cols=38 Identities=39% Similarity=0.464 Sum_probs=34.7
Q ss_pred CCccEEEECCCcchHHHHHhhhc-C-CeEEEEeeCCCCCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ-N-ASVLLLERGGSPYG 68 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae-g-~~VlvLE~G~~~~~ 68 (557)
..+||||||||++|+++|++|++ | .+|+|||+.+...+
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGG 46 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGG 46 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBT
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCC
Confidence 46899999999999999999999 9 99999999887654
No 123
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.58 E-value=2.4e-05 Score=80.78 Aligned_cols=33 Identities=30% Similarity=0.323 Sum_probs=30.9
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
.+||||||+|++|+++|..|++ |.+|+|||+..
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 3799999999999999999999 99999999975
No 124
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.57 E-value=3e-05 Score=81.32 Aligned_cols=34 Identities=38% Similarity=0.463 Sum_probs=31.6
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
+..||+||||+|++|+++|.+|++ |.+|+|+|++
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~ 41 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFV 41 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 457999999999999999999999 9999999964
No 125
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.57 E-value=2.7e-05 Score=76.96 Aligned_cols=35 Identities=43% Similarity=0.683 Sum_probs=32.4
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 29 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 29 ~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
+...+|++|||+|++|+.+|..|++ |.+|+|||+.
T Consensus 5 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 40 (325)
T 2q7v_A 5 TAHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG 40 (325)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC
Confidence 3456999999999999999999999 9999999998
No 126
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.57 E-value=2.4e-05 Score=81.62 Aligned_cols=36 Identities=25% Similarity=0.290 Sum_probs=33.2
Q ss_pred CccEEEECCCcchHHHHHhhhc-C------CeEEEEeeCCCCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-N------ASVLLLERGGSPY 67 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g------~~VlvLE~G~~~~ 67 (557)
.+||||||||.+|+++|++|++ | .+|+|||+.+...
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~G 47 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVG 47 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSC
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCC
Confidence 5899999999999999999999 9 9999999986654
No 127
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.56 E-value=2.4e-05 Score=81.96 Aligned_cols=36 Identities=33% Similarity=0.624 Sum_probs=33.0
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 29 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 29 ~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
++..|||||||+|++|+.+|.+|++ |.+|+|+|++.
T Consensus 17 ~~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~ 53 (478)
T 3dk9_A 17 AVASYDYLVIGGGSGGLASARRAAELGARAAVVESHK 53 (478)
T ss_dssp CEEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Confidence 3457999999999999999999999 99999999874
No 128
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.56 E-value=4e-05 Score=76.99 Aligned_cols=39 Identities=26% Similarity=0.332 Sum_probs=34.7
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeC-CCCC
Q 008675 29 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG-GSPY 67 (557)
Q Consensus 29 ~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G-~~~~ 67 (557)
+...+||+|||+|++|+++|++|++ |.+|+|||+. ....
T Consensus 41 ~~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vG 81 (376)
T 2e1m_A 41 PGPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVG 81 (376)
T ss_dssp CCSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCB
T ss_pred CCCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccC
Confidence 3457899999999999999999999 9999999998 6543
No 129
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.56 E-value=3.2e-05 Score=80.67 Aligned_cols=35 Identities=31% Similarity=0.551 Sum_probs=32.6
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
+..||+||||+|++|+.+|.+|++ |.+|+|+|++.
T Consensus 2 ~~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (463)
T 2r9z_A 2 TQHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA 37 (463)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 457999999999999999999999 99999999984
No 130
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.55 E-value=4.2e-05 Score=80.68 Aligned_cols=40 Identities=28% Similarity=0.335 Sum_probs=34.4
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCCCC
Q 008675 29 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYG 68 (557)
Q Consensus 29 ~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~~~ 68 (557)
|...+||||||+|++|+++|+.|++ |.+|+|||+.+...+
T Consensus 10 ~~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG 50 (504)
T 1sez_A 10 HSSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGG 50 (504)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCS
T ss_pred cCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCC
Confidence 4557999999999999999999999 999999999987654
No 131
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.54 E-value=2.6e-05 Score=80.98 Aligned_cols=38 Identities=29% Similarity=0.380 Sum_probs=34.3
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCCCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYG 68 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~~~ 68 (557)
..+||||||+|++|+++|++|++ |.+|+|||+.....+
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG 42 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGG 42 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCC
Confidence 36899999999999999999999 999999999876543
No 132
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.54 E-value=3.4e-05 Score=80.18 Aligned_cols=35 Identities=31% Similarity=0.529 Sum_probs=32.1
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
...||+||||+|++|+.+|.+|++ |.+|+|+|++.
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (450)
T 1ges_A 2 TKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKE 37 (450)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC
Confidence 356999999999999999999999 99999999984
No 133
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.53 E-value=3.9e-05 Score=68.76 Aligned_cols=32 Identities=38% Similarity=0.715 Sum_probs=30.9
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
||++|||+|++|+.+|..|++ |.+|+|+|+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 799999999999999999999 99999999986
No 134
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.52 E-value=4.4e-05 Score=79.70 Aligned_cols=36 Identities=31% Similarity=0.354 Sum_probs=33.1
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 29 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 29 ~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
|+..||+||||+|++|+.+|.+|++ |.+|+|+|++.
T Consensus 1 M~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~ 37 (467)
T 1zk7_A 1 MEPPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGT 37 (467)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 3457999999999999999999999 99999999984
No 135
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.50 E-value=4.3e-05 Score=80.28 Aligned_cols=33 Identities=36% Similarity=0.490 Sum_probs=31.6
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
.||+||||+|+||+++|.+|++ |.+|+|+|++.
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 5999999999999999999999 99999999975
No 136
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.50 E-value=3.5e-05 Score=77.10 Aligned_cols=32 Identities=16% Similarity=0.279 Sum_probs=30.3
Q ss_pred cEEEECCCcchHHHHHhhhc-C------CeEEEEeeCCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-N------ASVLLLERGGS 65 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g------~~VlvLE~G~~ 65 (557)
||||||+|.+|+++|+.|++ | .+|+|||++..
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCG
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCC
Confidence 89999999999999999999 8 89999999863
No 137
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.50 E-value=3.7e-05 Score=80.91 Aligned_cols=38 Identities=34% Similarity=0.480 Sum_probs=34.2
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCCCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYG 68 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~~~ 68 (557)
+.+||||||+|++|+++|++|++ |.+|+|||+.+...+
T Consensus 38 ~~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG 76 (495)
T 2vvm_A 38 GPWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGG 76 (495)
T ss_dssp CCEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBT
T ss_pred cCCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 34999999999999999999999 999999999876543
No 138
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.50 E-value=4.5e-05 Score=79.73 Aligned_cols=35 Identities=26% Similarity=0.421 Sum_probs=32.3
Q ss_pred ccEEEECCCcchHHHHHhhhc-CC--eEEEEeeCCCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NA--SVLLLERGGSPY 67 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~--~VlvLE~G~~~~ 67 (557)
+||||||||.+|+++|++|++ |. +|+|||+.+...
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~G 40 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLG 40 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSB
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCC
Confidence 699999999999999999999 98 999999987554
No 139
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.49 E-value=4.4e-05 Score=74.12 Aligned_cols=33 Identities=39% Similarity=0.664 Sum_probs=31.1
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
.|||+|||+|++|+.+|..|++ |.+|+|+|++.
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 35 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGE 35 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 3899999999999999999999 99999999975
No 140
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.49 E-value=3.9e-05 Score=80.36 Aligned_cols=35 Identities=37% Similarity=0.681 Sum_probs=32.2
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
+..||+||||+|++|+.+|.+|++ |.+|+|+|++.
T Consensus 9 ~~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~ 44 (479)
T 2hqm_A 9 TKHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA 44 (479)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC
T ss_pred cccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 457999999999999999999999 99999999974
No 141
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.49 E-value=5e-05 Score=79.44 Aligned_cols=37 Identities=30% Similarity=0.358 Sum_probs=33.3
Q ss_pred CCccEEEECCCcchHHHHHhhhc-C--CeEEEEeeCCCCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ-N--ASVLLLERGGSPY 67 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae-g--~~VlvLE~G~~~~ 67 (557)
..+||||||+|.+|+++|++|++ | .+|+|||+.+...
T Consensus 3 ~~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~G 42 (475)
T 3lov_A 3 SSKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLG 42 (475)
T ss_dssp CSCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSB
T ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCC
Confidence 36899999999999999999999 8 9999999976543
No 142
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.47 E-value=6.1e-05 Score=79.77 Aligned_cols=63 Identities=16% Similarity=0.256 Sum_probs=45.3
Q ss_pred hhcCCCCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCCeeEEeeecCCceEEEEccCCcCchH-HHHhhc
Q 008675 205 EYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQ-LLMLSG 277 (557)
Q Consensus 205 ~~~~~~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~v~~~~~aa~~VIlaaGa~~sp~-lLl~Sg 277 (557)
..+++.|+++++++.|++|..++++ +++++.+...+|+ .++. ++.||+|+|..-+.. +|..+|
T Consensus 263 ~~l~~~GV~i~~~~~V~~i~~~~~~----~v~~~~v~~~~G~-~~i~-----aD~Vv~A~G~~p~~~~~l~~~g 326 (523)
T 1mo9_A 263 DRMKEQGMEIISGSNVTRIEEDANG----RVQAVVAMTPNGE-MRIE-----TDFVFLGLGEQPRSAELAKILG 326 (523)
T ss_dssp HHHHHTTCEEESSCEEEEEEECTTS----BEEEEEEEETTEE-EEEE-----CSCEEECCCCEECCHHHHHHHT
T ss_pred HHHHhCCcEEEECCEEEEEEEcCCC----ceEEEEEEECCCc-EEEE-----cCEEEECcCCccCCccCHHHcC
Confidence 3455679999999999999875442 6666655544563 2443 799999999876666 677666
No 143
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.46 E-value=6.6e-05 Score=76.17 Aligned_cols=36 Identities=17% Similarity=0.339 Sum_probs=33.3
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPY 67 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~~ 67 (557)
++|++|||+|.+|+++|++|++ |.+|+|+|+.....
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~G 39 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIG 39 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcC
Confidence 5899999999999999999999 99999999987654
No 144
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.46 E-value=4.1e-05 Score=80.39 Aligned_cols=34 Identities=26% Similarity=0.464 Sum_probs=31.6
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
..+||+||||+|+||+++|.+|++ |.+|+|+|+.
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~ 38 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYV 38 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEec
Confidence 346999999999999999999999 9999999984
No 145
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.45 E-value=4.2e-05 Score=80.20 Aligned_cols=37 Identities=27% Similarity=0.489 Sum_probs=33.3
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 29 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 29 ~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
|+..||+||||+|++|+.+|.+|++ |.+|+|+|+.+.
T Consensus 3 m~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~ 40 (482)
T 1ojt_A 3 ADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKT 40 (482)
T ss_dssp SEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSC
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 4447999999999999999999999 999999999654
No 146
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.44 E-value=3.6e-05 Score=80.61 Aligned_cols=36 Identities=33% Similarity=0.448 Sum_probs=32.7
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
+..|||||||+|++|+.+|.+|++ |.+|+|+|+.+.
T Consensus 3 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~ 39 (478)
T 1v59_A 3 NKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGK 39 (478)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 346999999999999999999999 999999999653
No 147
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.42 E-value=4.1e-05 Score=75.40 Aligned_cols=34 Identities=24% Similarity=0.337 Sum_probs=31.3
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
+..+||+|||+|++|+.+|..|++ |.+|+|+|+.
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 37 (320)
T 1trb_A 3 TKHSKLLILGSGPAGYTAAVYAARANLQPVLITGM 37 (320)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC
Confidence 346899999999999999999999 9999999964
No 148
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.41 E-value=0.00013 Score=72.63 Aligned_cols=34 Identities=29% Similarity=0.300 Sum_probs=31.8
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
+||||||+|.+|+.+|..|++ |.+|+|+|+.+..
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~ 36 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKR 36 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTS
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCc
Confidence 699999999999999999999 9999999998753
No 149
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.38 E-value=8.2e-05 Score=77.69 Aligned_cols=37 Identities=30% Similarity=0.423 Sum_probs=33.6
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
+..||+||||+|++|+.+|.+|++ |.+|+|+|+.+..
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~ 41 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGAL 41 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 356999999999999999999999 9999999998644
No 150
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.37 E-value=7.4e-05 Score=77.98 Aligned_cols=35 Identities=29% Similarity=0.521 Sum_probs=32.4
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
.|||||||+|++|+.+|.+|++ |.+|+|+|+.+..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~ 37 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGAL 37 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 5899999999999999999999 9999999998643
No 151
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.37 E-value=5.5e-05 Score=78.88 Aligned_cols=32 Identities=28% Similarity=0.480 Sum_probs=31.0
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
.|||||||+|++|+.+|.+|++ |.+|+|+|+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 5899999999999999999999 9999999997
No 152
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.36 E-value=0.00039 Score=70.45 Aligned_cols=37 Identities=16% Similarity=0.225 Sum_probs=31.6
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 29 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 29 ~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
..+..-|+|||+|+||+.+|.+|.. +.+|+|+|+.+.
T Consensus 6 ~~~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~ 43 (385)
T 3klj_A 6 HHKSTKILILGAGPAGFSAAKAALGKCDDITMINSEKY 43 (385)
T ss_dssp --CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSS
T ss_pred ccCCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCC
Confidence 3456779999999999999999977 899999999864
No 153
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.35 E-value=8.5e-05 Score=78.22 Aligned_cols=33 Identities=42% Similarity=0.728 Sum_probs=31.5
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
.||+||||+|++|+.+|.+|++ |.+|+|+|++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4999999999999999999999 99999999985
No 154
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.35 E-value=7.8e-05 Score=77.50 Aligned_cols=34 Identities=29% Similarity=0.506 Sum_probs=31.8
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
+||+||||+|++|+.+|.+|++ |.+|+|+|+++.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~ 35 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKA 35 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCC
Confidence 4899999999999999999999 999999999854
No 155
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.35 E-value=7.2e-05 Score=73.30 Aligned_cols=31 Identities=35% Similarity=0.632 Sum_probs=30.0
Q ss_pred ccEEEECCCcchHHHHHhhhc-CC-eEEEEeeC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERG 63 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~-~VlvLE~G 63 (557)
||++|||+|++|+.+|..|++ |. +|+|+|+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC
Confidence 899999999999999999999 99 99999995
No 156
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.34 E-value=9.9e-05 Score=77.32 Aligned_cols=38 Identities=26% Similarity=0.345 Sum_probs=34.1
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-C-CeEEEEeeCCCCC
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQ-N-ASVLLLERGGSPY 67 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Lae-g-~~VlvLE~G~~~~ 67 (557)
...+||+|||+|++|+++|++|++ | .+|+|+|+.+...
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~G 46 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPG 46 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSS
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 356999999999999999999999 8 7999999987654
No 157
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.33 E-value=7.3e-05 Score=77.92 Aligned_cols=33 Identities=39% Similarity=0.589 Sum_probs=31.8
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
.||+||||+|+||+.+|.+|++ |.+|+|+|++.
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 6999999999999999999999 99999999986
No 158
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.32 E-value=6.9e-05 Score=74.41 Aligned_cols=35 Identities=29% Similarity=0.373 Sum_probs=32.1
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 29 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 29 ~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
++..+|++|||+|++|+.+|..|++ |.+|+|+|+.
T Consensus 11 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 46 (335)
T 2a87_A 11 HHPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT 46 (335)
T ss_dssp CCCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Confidence 4567999999999999999999999 9999999964
No 159
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.32 E-value=9.1e-05 Score=72.52 Aligned_cols=31 Identities=29% Similarity=0.463 Sum_probs=29.3
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEee
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLER 62 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~ 62 (557)
+|||+|||+|++|+.+|.+|++ |.+|+|||+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~ 32 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGE 32 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeC
Confidence 4899999999999999999999 999999985
No 160
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.32 E-value=0.00011 Score=77.27 Aligned_cols=40 Identities=30% Similarity=0.407 Sum_probs=35.3
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCCCC
Q 008675 29 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYG 68 (557)
Q Consensus 29 ~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~~~ 68 (557)
+...+||||||+|++|+.+|+.|++ |.+|+|||+.+...+
T Consensus 30 ~~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg 70 (498)
T 2iid_A 30 TSNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGG 70 (498)
T ss_dssp CSSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBT
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCC
Confidence 3457899999999999999999999 999999999876543
No 161
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.32 E-value=8.6e-05 Score=77.26 Aligned_cols=34 Identities=29% Similarity=0.412 Sum_probs=31.6
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
..||+||||+|+||+.+|.+|++ |.+|+|+|++.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~ 38 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQA 38 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccCC
Confidence 46999999999999999999999 99999999953
No 162
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.31 E-value=0.00012 Score=79.48 Aligned_cols=37 Identities=35% Similarity=0.534 Sum_probs=33.3
Q ss_pred CCCccEEEECCCcchHHHHHhhhc--CCeEEEEeeCCCC
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSP 66 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Lae--g~~VlvLE~G~~~ 66 (557)
...+||||||+|++|+++|..|++ |.+|+||||....
T Consensus 30 ~~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~ 68 (639)
T 2dkh_A 30 PSQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGP 68 (639)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSC
T ss_pred CCCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 357999999999999999999998 8999999998643
No 163
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.29 E-value=8.9e-05 Score=77.51 Aligned_cols=36 Identities=22% Similarity=0.291 Sum_probs=32.9
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
..||+||||+|++|+.+|.+|++ |.+|+|+|+.+..
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~ 41 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETL 41 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCc
Confidence 35999999999999999999999 9999999998643
No 164
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.28 E-value=0.00012 Score=77.74 Aligned_cols=36 Identities=36% Similarity=0.601 Sum_probs=32.2
Q ss_pred CCccEEEECCCcchHHHHHhhhc----CCeEEEEeeCCCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ----NASVLLLERGGSP 66 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae----g~~VlvLE~G~~~ 66 (557)
..+||||||||++|+++|..|++ |.+|+|||+....
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~ 43 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIP 43 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCC
Confidence 46899999999999999999987 7999999997543
No 165
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.28 E-value=9.4e-05 Score=76.90 Aligned_cols=32 Identities=25% Similarity=0.485 Sum_probs=30.9
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
.||+||||+|++|+.+|.+|++ |.+|+|+|+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 35 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG 35 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 5899999999999999999999 9999999997
No 166
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.21 E-value=0.00015 Score=73.92 Aligned_cols=33 Identities=33% Similarity=0.448 Sum_probs=30.4
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
.|+|||+|++|+++|..|++ |.+|+|+||.+..
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAA 36 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 59999999999999999999 9999999997543
No 167
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.20 E-value=0.00017 Score=77.05 Aligned_cols=42 Identities=31% Similarity=0.310 Sum_probs=37.4
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCCCCCC
Q 008675 29 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYGNP 70 (557)
Q Consensus 29 ~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~~~~~ 70 (557)
+..+|||||||+|..|+++|..|++ |+|||+||+.....++.
T Consensus 5 ~~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~ 47 (650)
T 1vg0_A 5 LPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNW 47 (650)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGG
T ss_pred CCCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCcc
Confidence 3447999999999999999999999 99999999998876543
No 168
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.19 E-value=0.00011 Score=72.70 Aligned_cols=32 Identities=25% Similarity=0.294 Sum_probs=30.5
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEee
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLER 62 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~ 62 (557)
..+||+|||+|++|+.+|..|++ |.+|+|||+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEec
Confidence 45899999999999999999999 999999998
No 169
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.18 E-value=0.00022 Score=75.95 Aligned_cols=36 Identities=36% Similarity=0.548 Sum_probs=32.3
Q ss_pred CCccEEEECCCcchHHHHHhhhc----CCeEEEEeeCCCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ----NASVLLLERGGSP 66 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae----g~~VlvLE~G~~~ 66 (557)
..+||||||+|++|+++|..|++ |.+|+|||+....
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~ 63 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDIP 63 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCCC
Confidence 57999999999999999999997 5899999997543
No 170
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.17 E-value=0.00022 Score=78.13 Aligned_cols=39 Identities=26% Similarity=0.304 Sum_probs=34.8
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCCC
Q 008675 29 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPY 67 (557)
Q Consensus 29 ~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~~ 67 (557)
....+||||||+|++|+.+|..|++ |++|+|+|++....
T Consensus 388 ~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~G 427 (690)
T 3k30_A 388 KESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLG 427 (690)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSC
T ss_pred ccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCC
Confidence 4457999999999999999999999 99999999986543
No 171
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.16 E-value=0.0002 Score=78.93 Aligned_cols=38 Identities=32% Similarity=0.318 Sum_probs=34.3
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCCC
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPY 67 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~~ 67 (557)
...+||||||+|++|+++|..|++ |.+|+|||++....
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~g 372 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIG 372 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeccccee
Confidence 346899999999999999999999 99999999987654
No 172
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.15 E-value=0.00027 Score=73.22 Aligned_cols=37 Identities=24% Similarity=0.208 Sum_probs=33.8
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
...+||+|||||++|+.+|..|++ |++|+|+|+.+..
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~ 157 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRM 157 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCC
Confidence 356899999999999999999999 9999999998754
No 173
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.14 E-value=0.00017 Score=75.80 Aligned_cols=34 Identities=18% Similarity=0.366 Sum_probs=31.2
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc--CCeEEEEee
Q 008675 29 PVSYYDYIIIGGGTAGCPLAATLSQ--NASVLLLER 62 (557)
Q Consensus 29 ~~~~~DvIIVGsG~aG~~~A~~Lae--g~~VlvLE~ 62 (557)
|...||+||||+|++|+.+|.+|++ |.+|+|+|+
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 4557999999999999999999998 999999993
No 174
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.14 E-value=0.00018 Score=75.13 Aligned_cols=38 Identities=29% Similarity=0.385 Sum_probs=33.0
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CC-eEEEEeeCCCCCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGGSPYG 68 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae-g~-~VlvLE~G~~~~~ 68 (557)
..+||+|||+|++|+++|++|++ |. +|+|+|+++...+
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg 42 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGG 42 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCC
Confidence 46899999999999999999999 98 8999999876543
No 175
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.14 E-value=0.00022 Score=72.25 Aligned_cols=35 Identities=26% Similarity=0.424 Sum_probs=30.3
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-C--CeEEEEeeCC
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQ-N--ASVLLLERGG 64 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Lae-g--~~VlvLE~G~ 64 (557)
+..||+||||+|++|+.+|.+|++ | .+|+|+|+..
T Consensus 2 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 2 SERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp --CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 346999999999999999999999 7 5799999864
No 176
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.10 E-value=0.00024 Score=73.19 Aligned_cols=59 Identities=14% Similarity=0.203 Sum_probs=43.4
Q ss_pred hhcCCCCcEEEcCcEEEEEEE--ecCCCCCCeEEEEEEEeCCCCeeEEeeecCCceEEEEccCCcCchHHHHhhc
Q 008675 205 EYANPSGLTLLLHASVHKVLF--RIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277 (557)
Q Consensus 205 ~~~~~~n~~i~~~~~V~~i~~--~~~~~~~~~~~gV~~~~~~g~~~~v~~~~~aa~~VIlaaGa~~sp~lLl~Sg 277 (557)
...++.|+++++++.|++|.. +++ ++.+|++. +|+. +. ++.||+|+|..-...+|..+|
T Consensus 199 ~~l~~~GV~i~~~~~v~~i~~~~~~~-----~v~~v~~~--~G~~--i~-----~D~Vv~a~G~~p~~~l~~~~g 259 (431)
T 1q1r_A 199 HLHREAGVDIRTGTQVCGFEMSTDQQ-----KVTAVLCE--DGTR--LP-----ADLVIAGIGLIPNCELASAAG 259 (431)
T ss_dssp HHHHHHTCEEECSCCEEEEEECTTTC-----CEEEEEET--TSCE--EE-----CSEEEECCCEEECCHHHHHTT
T ss_pred HHHHhCCeEEEeCCEEEEEEeccCCC-----cEEEEEeC--CCCE--EE-----cCEEEECCCCCcCcchhhccC
Confidence 344567999999999999986 333 67777764 5643 33 799999999776667777776
No 177
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.10 E-value=0.00024 Score=71.97 Aligned_cols=34 Identities=26% Similarity=0.455 Sum_probs=30.8
Q ss_pred ccEEEECCCcchHHHHHhhhc---CCeEEEEeeCCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGSP 66 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae---g~~VlvLE~G~~~ 66 (557)
.||||||+|++|+++|..|++ |.+|+|||+.+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 389999999999999999997 7999999998653
No 178
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.08 E-value=0.00026 Score=74.20 Aligned_cols=31 Identities=23% Similarity=0.502 Sum_probs=29.5
Q ss_pred CCccEEEECCCcchHHHHHhhhc--CCeEEEEe
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ--NASVLLLE 61 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae--g~~VlvLE 61 (557)
..||+||||+|++|+.+|.+|++ |.+|+|+|
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE 34 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVID 34 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEE
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEe
Confidence 46999999999999999999998 99999999
No 179
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.07 E-value=0.00022 Score=76.92 Aligned_cols=34 Identities=29% Similarity=0.488 Sum_probs=31.8
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
...||+||||+|+||+.+|.+|++ |.+|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 457999999999999999999999 9999999984
No 180
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.05 E-value=0.00019 Score=75.82 Aligned_cols=34 Identities=38% Similarity=0.554 Sum_probs=29.2
Q ss_pred CccEEEECCCcchHHHHHhhhc----CCeEEEEeeCCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ----NASVLLLERGGS 65 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae----g~~VlvLE~G~~ 65 (557)
.+||||||||++|+++|..|++ |.+|+|||+...
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~ 39 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNV 39 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC---
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCC
Confidence 4799999999999999999987 689999999764
No 181
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.04 E-value=0.00027 Score=74.84 Aligned_cols=35 Identities=34% Similarity=0.513 Sum_probs=31.5
Q ss_pred CCccEEEECCCcchHHHHHhhhc-------------CCeEEEEeeCCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ-------------NASVLLLERGGS 65 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae-------------g~~VlvLE~G~~ 65 (557)
..+||||||||++|+++|..|++ |.+|+|||+...
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~ 53 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDV 53 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCC
Confidence 46899999999999999999986 689999999754
No 182
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.98 E-value=0.0003 Score=74.35 Aligned_cols=34 Identities=26% Similarity=0.411 Sum_probs=31.4
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CCeEEEEee
Q 008675 29 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLER 62 (557)
Q Consensus 29 ~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~ 62 (557)
....|||+|||||++|+.+|..|++ |.+|+|+|+
T Consensus 209 ~~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~ 243 (521)
T 1hyu_A 209 KRDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE 243 (521)
T ss_dssp TSCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred ccCcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC
Confidence 3557999999999999999999999 999999986
No 183
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=96.96 E-value=0.00051 Score=74.83 Aligned_cols=40 Identities=33% Similarity=0.352 Sum_probs=35.4
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCCCC
Q 008675 29 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYG 68 (557)
Q Consensus 29 ~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~~~ 68 (557)
....+||+|||+|++|+++|..|++ |.+|+|+|+.+...+
T Consensus 104 ~~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg 144 (662)
T 2z3y_A 104 TKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 144 (662)
T ss_dssp SSCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBT
T ss_pred ccCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 3557899999999999999999999 999999999876543
No 184
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=96.91 E-value=0.00037 Score=73.26 Aligned_cols=33 Identities=27% Similarity=0.495 Sum_probs=30.6
Q ss_pred CccEEEECCCcchHHHHHhhhc----CCeEEEEeeCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ----NASVLLLERGG 64 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae----g~~VlvLE~G~ 64 (557)
.|||||||+|++|+.+|.+|++ |.+|+|+|++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 4899999999999999999987 68999999986
No 185
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.90 E-value=0.00044 Score=69.55 Aligned_cols=33 Identities=33% Similarity=0.578 Sum_probs=30.8
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
.|+||||+|+||+.+|.+|++ | +|+|+|++...
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~ 42 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVP 42 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSC
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCC
Confidence 599999999999999999999 9 99999998753
No 186
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=96.88 E-value=0.00054 Score=71.85 Aligned_cols=34 Identities=12% Similarity=0.323 Sum_probs=32.0
Q ss_pred CccEEEECCCcchHHHHHhhhc-C---CeEEEEeeCCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-N---ASVLLLERGGS 65 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g---~~VlvLE~G~~ 65 (557)
.+|+||||+|++|+.+|.+|++ | .+|+|+|+...
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~ 72 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSN 72 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCC
Confidence 5999999999999999999999 8 99999999874
No 187
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=96.87 E-value=0.00039 Score=75.70 Aligned_cols=34 Identities=32% Similarity=0.612 Sum_probs=31.4
Q ss_pred CccEEEECCCcchHHHHHhhhc------CCeEEEEeeCCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ------NASVLLLERGGS 65 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae------g~~VlvLE~G~~ 65 (557)
.+||+|||+|++|+++|..|++ |.+|+||||.+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~ 47 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRST 47 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCC
Confidence 5899999999999999999997 899999999754
No 188
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.87 E-value=0.00071 Score=73.89 Aligned_cols=38 Identities=21% Similarity=0.308 Sum_probs=34.2
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCCC
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPY 67 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~~ 67 (557)
...+||||||+|+||+.+|..|++ |.+|+|+|+.+...
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~g 409 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIG 409 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 456899999999999999999999 99999999986543
No 189
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=96.87 E-value=0.00054 Score=70.96 Aligned_cols=35 Identities=29% Similarity=0.398 Sum_probs=32.0
Q ss_pred CccEEEECCCcchHHHHHhhhc---CCeEEEEeeCCCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGSP 66 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae---g~~VlvLE~G~~~ 66 (557)
.+||||||+|++|+.+|.+|++ +.+|+|+|+++..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~ 40 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWV 40 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCcc
Confidence 5899999999999999999998 5799999999754
No 190
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=96.83 E-value=0.00059 Score=69.73 Aligned_cols=36 Identities=17% Similarity=0.249 Sum_probs=32.2
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CC--eEEEEeeCCCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ-NA--SVLLLERGGSP 66 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae-g~--~VlvLE~G~~~ 66 (557)
..+|+||||+|++|+.+|.+|++ |. +|+|+|+.+..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~ 44 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAER 44 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCC
Confidence 46899999999999999999999 86 69999998753
No 191
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=96.82 E-value=0.00055 Score=70.99 Aligned_cols=33 Identities=21% Similarity=0.222 Sum_probs=30.8
Q ss_pred ccEEEECCCcchHHHHHhhhc---CCeEEEEeeCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGS 65 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae---g~~VlvLE~G~~ 65 (557)
||+||||+|++|+.+|.+|++ |.+|+|+|+...
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~ 36 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDN 36 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCC
Confidence 699999999999999999998 799999999874
No 192
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.79 E-value=0.00075 Score=74.32 Aligned_cols=37 Identities=22% Similarity=0.301 Sum_probs=33.9
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
...+||+|||+|+||+.+|..|++ |++|+|+|+.+..
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~ 424 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKI 424 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 456899999999999999999999 9999999998754
No 193
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=96.79 E-value=0.00061 Score=71.05 Aligned_cols=58 Identities=14% Similarity=0.048 Sum_probs=42.4
Q ss_pred hhcCCCCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCCeeEEeeecCCceEEEEccCCcCchHHHHhhc
Q 008675 205 EYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277 (557)
Q Consensus 205 ~~~~~~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~v~~~~~aa~~VIlaaGa~~sp~lLl~Sg 277 (557)
..+++.|+++++++.|++|..+++ +++ |.+. +|+ ++. ++.||+|+|..-.+.++..+|
T Consensus 210 ~~l~~~GV~i~~~~~v~~i~~~~~-----~v~-v~~~--~g~--~i~-----aD~Vv~a~G~~p~~~l~~~~g 267 (472)
T 3iwa_A 210 HDLEKNDVVVHTGEKVVRLEGENG-----KVA-RVIT--DKR--TLD-----ADLVILAAGVSPNTQLARDAG 267 (472)
T ss_dssp HHHHHTTCEEECSCCEEEEEESSS-----BEE-EEEE--SSC--EEE-----CSEEEECSCEEECCHHHHHHT
T ss_pred HHHHhcCCEEEeCCEEEEEEccCC-----eEE-EEEe--CCC--EEE-----cCEEEECCCCCcCHHHHHhCC
Confidence 345667999999999999987554 544 5554 564 333 699999999876667776666
No 194
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=96.79 E-value=0.00097 Score=74.12 Aligned_cols=39 Identities=33% Similarity=0.360 Sum_probs=34.9
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCCCC
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYG 68 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~~~ 68 (557)
...+||+|||+|++|+++|+.|++ |++|+|+|+.....+
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG 315 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 315 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCC
Confidence 456899999999999999999999 999999999876543
No 195
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=96.79 E-value=0.00058 Score=71.62 Aligned_cols=58 Identities=19% Similarity=0.213 Sum_probs=42.2
Q ss_pred hhcCCCCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCCeeEEeeecCCceEEEEccCCcCchHHHHhhc
Q 008675 205 EYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277 (557)
Q Consensus 205 ~~~~~~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~v~~~~~aa~~VIlaaGa~~sp~lLl~Sg 277 (557)
...++.|+++++++.|++|..+++ ++ .|+. .+|+. +. ++.||+|+|..-+..++..+|
T Consensus 234 ~~l~~~GV~v~~~~~V~~i~~~~~-----~~-~v~l--~dG~~--i~-----aD~Vv~a~G~~pn~~l~~~~g 291 (493)
T 1m6i_A 234 EKVRREGVKVMPNAIVQSVGVSSG-----KL-LIKL--KDGRK--VE-----TDHIVAAVGLEPNVELAKTGG 291 (493)
T ss_dssp HHHHTTTCEEECSCCEEEEEEETT-----EE-EEEE--TTSCE--EE-----ESEEEECCCEEECCTTHHHHT
T ss_pred HHHHhcCCEEEeCCEEEEEEecCC-----eE-EEEE--CCCCE--EE-----CCEEEECCCCCccHHHHHHcC
Confidence 345667999999999999986543 33 4544 35643 33 699999999876667777776
No 196
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=96.70 E-value=0.00082 Score=69.67 Aligned_cols=35 Identities=23% Similarity=0.348 Sum_probs=31.8
Q ss_pred ccEEEECCCcchHHHHHhhhc---CCeEEEEeeCCCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGSPY 67 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae---g~~VlvLE~G~~~~ 67 (557)
.||||||+|++|+.+|.+|++ |.+|+|+|+++...
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g 40 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVG 40 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCc
Confidence 599999999999999999998 68999999998643
No 197
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=96.60 E-value=0.001 Score=69.56 Aligned_cols=35 Identities=40% Similarity=0.642 Sum_probs=31.3
Q ss_pred CccEEEECCCcchHHHHHhhhc---CCeEEEEeeCCCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGSP 66 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae---g~~VlvLE~G~~~ 66 (557)
.+|+||||+|++|+.+|.+|++ |.+|+|+|+....
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 73 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIY 73 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCC
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 3699999999999999999998 7899999998754
No 198
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.60 E-value=0.00083 Score=76.29 Aligned_cols=61 Identities=15% Similarity=0.105 Sum_probs=44.6
Q ss_pred cCCCCcEEEcCcEEEEEEEe-cCCCCCCeEEEEEEEe--C---CCCeeEEeeecCCceEEEEccCCcCchHHHHhhc
Q 008675 207 ANPSGLTLLLHASVHKVLFR-IKGKARPVAHGVVFRD--A---TGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277 (557)
Q Consensus 207 ~~~~n~~i~~~~~V~~i~~~-~~~~~~~~~~gV~~~~--~---~g~~~~v~~~~~aa~~VIlaaGa~~sp~lLl~Sg 277 (557)
+++.|++|++++.|++|.-+ ++ ++.+|++.+ . +|+..++. ++.||+|+|-.-+..++..++
T Consensus 326 l~~~GV~v~~~~~v~~i~~~~~~-----~v~~v~~~~~~~~~~~G~~~~i~-----~D~Vv~a~G~~P~~~l~~~~~ 392 (965)
T 2gag_A 326 AVADGVQVISGSVVVDTEADENG-----ELSAIVVAELDEARELGGTQRFE-----ADVLAVAGGFNPVVHLHSQRQ 392 (965)
T ss_dssp HHHTTCCEEETEEEEEEEECTTS-----CEEEEEEEEECTTCCEEEEEEEE-----CSEEEEECCEEECCHHHHHTT
T ss_pred HHhCCeEEEeCCEeEEEeccCCC-----CEEEEEEEeccccCCCCceEEEE-----cCEEEECCCcCcChHHHHhCC
Confidence 34579999999999999764 33 788898875 2 24334554 799999999766667766554
No 199
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=96.59 E-value=0.001 Score=68.86 Aligned_cols=34 Identities=21% Similarity=0.363 Sum_probs=30.9
Q ss_pred ccEEEECCCcchHHHHHhhhc---CCeEEEEeeCCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGSP 66 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae---g~~VlvLE~G~~~ 66 (557)
+|+||||+|++|+.+|.+|++ |.+|+|+|+.+..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFI 37 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCcc
Confidence 489999999999999999998 7899999998753
No 200
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.58 E-value=0.0011 Score=68.64 Aligned_cols=36 Identities=31% Similarity=0.374 Sum_probs=32.4
Q ss_pred CCccEEEECCCcchHHHHHhhhc--------CCeEEEEeeCCCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ--------NASVLLLERGGSP 66 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae--------g~~VlvLE~G~~~ 66 (557)
..+||+|||+|++|+.+|..|++ |.+|+|+|+.+..
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~ 45 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTP 45 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSC
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCC
Confidence 46899999999999999999987 8999999998654
No 201
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.56 E-value=0.0012 Score=68.63 Aligned_cols=36 Identities=28% Similarity=0.338 Sum_probs=32.5
Q ss_pred CCccEEEECCCcchHHHHHhhhc-C--CeEEEEeeCCCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ-N--ASVLLLERGGSP 66 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae-g--~~VlvLE~G~~~ 66 (557)
..+|++|||+|++|+.+|..|++ | .+|+|+|+.+..
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~ 43 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVP 43 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSS
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcC
Confidence 45899999999999999999999 8 999999998754
No 202
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=96.55 E-value=0.0012 Score=70.94 Aligned_cols=37 Identities=24% Similarity=0.490 Sum_probs=33.1
Q ss_pred CCCccEEEECCCcchHHHHHhhhc---CCeEEEEeeCCCC
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGSP 66 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Lae---g~~VlvLE~G~~~ 66 (557)
+...||||||+|++|+.+|.+|++ |.+|+|+|+.+..
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~ 73 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYI 73 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 446899999999999999999998 6899999999764
No 203
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=96.53 E-value=0.018 Score=57.33 Aligned_cols=58 Identities=16% Similarity=0.150 Sum_probs=42.9
Q ss_pred CCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCCeeEEeeecCCceEEEEccCCcCchHHHHhhc
Q 008675 210 SGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277 (557)
Q Consensus 210 ~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~v~~~~~aa~~VIlaaGa~~sp~lLl~Sg 277 (557)
.|++++++++|++|..+++ ++.+|.+...+|+..++. ++.||+|+|.--.+.+|..++
T Consensus 215 ~gv~i~~~~~v~~i~~~~~-----~v~~v~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~l~~~~ 272 (360)
T 3ab1_A 215 GTIDVYLETEVASIEESNG-----VLTRVHLRSSDGSKWTVE-----ADRLLILIGFKSNLGPLARWD 272 (360)
T ss_dssp TSEEEESSEEEEEEEEETT-----EEEEEEEEETTCCEEEEE-----CSEEEECCCBCCSCGGGGGSS
T ss_pred CceEEEcCcCHHHhccCCC-----ceEEEEEEecCCCeEEEe-----CCEEEECCCCCCCHHHHHhhc
Confidence 5799999999999987755 788888864466555554 799999999655545555443
No 204
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=96.46 E-value=0.016 Score=58.37 Aligned_cols=34 Identities=21% Similarity=0.385 Sum_probs=30.8
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
.-+++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 179 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQ 179 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcc
Confidence 3579999999999999999999 999999999753
No 205
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=96.42 E-value=0.019 Score=60.42 Aligned_cols=33 Identities=12% Similarity=0.321 Sum_probs=30.4
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~ 248 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEP 248 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCc
Confidence 579999999999999999999 999999999864
No 206
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=96.41 E-value=0.0018 Score=66.70 Aligned_cols=35 Identities=26% Similarity=0.398 Sum_probs=31.5
Q ss_pred CccEEEECCCcchHHHHHhhhc----CCeEEEEeeCCCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ----NASVLLLERGGSP 66 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae----g~~VlvLE~G~~~ 66 (557)
..||||||+|++|+.+|..|++ |.+|+|||+.+..
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~ 42 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYF 42 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCC
Confidence 4799999999999999999987 6899999998753
No 207
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=96.40 E-value=0.0015 Score=67.15 Aligned_cols=34 Identities=24% Similarity=0.381 Sum_probs=31.1
Q ss_pred ccEEEECCCcchHHHHHhhhc---CCeEEEEeeCCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGSP 66 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae---g~~VlvLE~G~~~ 66 (557)
+|+||||+|++|+.+|.+|++ |.+|+|||+.+..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~ 39 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYF 39 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCC
Confidence 689999999999999999998 6899999998754
No 208
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.38 E-value=0.0017 Score=74.33 Aligned_cols=36 Identities=17% Similarity=0.252 Sum_probs=32.6
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CC-eEEEEeeCCCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGGSP 66 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae-g~-~VlvLE~G~~~ 66 (557)
..+||+|||||+||+.+|..|++ |+ +|+|+|+....
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~ 223 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYV 223 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCC
Confidence 46899999999999999999999 98 79999998644
No 209
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=96.31 E-value=0.0091 Score=58.33 Aligned_cols=58 Identities=21% Similarity=0.363 Sum_probs=42.5
Q ss_pred CCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEe-CCCCeeEEeeecCCceEEEEccCCcCchHHHHhhc
Q 008675 210 SGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277 (557)
Q Consensus 210 ~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~-~~g~~~~v~~~~~aa~~VIlaaGa~~sp~lLl~Sg 277 (557)
.|++++++++|++|..+++ ++.+|.+.+ .+|+..++. ++.||+|+|...++.+|..+|
T Consensus 203 ~gv~i~~~~~v~~i~~~~~-----~v~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~l~~~g 261 (319)
T 3cty_A 203 RNIPYIMNAQVTEIVGDGK-----KVTGVKYKDRTTGEEKLIE-----TDGVFIYVGLIPQTSFLKDSG 261 (319)
T ss_dssp TTCCEECSEEEEEEEESSS-----SEEEEEEEETTTCCEEEEC-----CSEEEECCCEEECCGGGTTSC
T ss_pred CCcEEEcCCeEEEEecCCc-----eEEEEEEEEcCCCceEEEe-----cCEEEEeeCCccChHHHhhcc
Confidence 4788999999999986544 688898875 256554553 799999999766656665443
No 210
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=96.31 E-value=0.014 Score=56.59 Aligned_cols=54 Identities=24% Similarity=0.319 Sum_probs=40.7
Q ss_pred CCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEe-CCCCeeEEeeecCCceEEEEccCCcCchHHH
Q 008675 210 SGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLL 273 (557)
Q Consensus 210 ~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~-~~g~~~~v~~~~~aa~~VIlaaGa~~sp~lL 273 (557)
.|++++++++|++|.-+++ ++.+|++.+ .+|+..++. ++.||+|+|....+.+|
T Consensus 193 ~gv~v~~~~~v~~i~~~~~-----~v~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~l 247 (310)
T 1fl2_A 193 KNVDIILNAQTTEVKGDGS-----KVVGLEYRDRVSGDIHNIE-----LAGIFVQIGLLPNTNWL 247 (310)
T ss_dssp TTEEEESSEEEEEEEESSS-----SEEEEEEEETTTCCEEEEE-----CSEEEECSCEEESCGGG
T ss_pred CCeEEecCCceEEEEcCCC-----cEEEEEEEECCCCcEEEEE-----cCEEEEeeCCccCchHH
Confidence 5899999999999986544 788999886 346555554 79999999965554544
No 211
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.29 E-value=0.0014 Score=68.69 Aligned_cols=36 Identities=42% Similarity=0.487 Sum_probs=32.3
Q ss_pred CCccEEEECCCcchHHHHHhhhcCCeEEEEeeCCCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQNASVLLLERGGSP 66 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Laeg~~VlvLE~G~~~ 66 (557)
..+||||||+|++|+.+|.+|++..+|+|||+++..
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~~~V~vie~~~~~ 142 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQYLTVALIEERGWL 142 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTTCCEEEECTTSSS
T ss_pred ccCCEEEECccHHHHHHHHHHHhcCCEEEEeCCCCC
Confidence 358999999999999999999876899999998765
No 212
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=96.25 E-value=0.0019 Score=65.92 Aligned_cols=33 Identities=21% Similarity=0.332 Sum_probs=30.1
Q ss_pred ccEEEECCCcchHHHHHhhhc----CCeEEEEeeCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ----NASVLLLERGGS 65 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae----g~~VlvLE~G~~ 65 (557)
.||||||+|++|+.+|.+|++ |.+|+|||+.+.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~ 38 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRF 38 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCC
Confidence 379999999999999999987 689999999874
No 213
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=96.23 E-value=0.024 Score=55.25 Aligned_cols=55 Identities=15% Similarity=0.154 Sum_probs=40.8
Q ss_pred CCCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEeC-C-CCeeEEeeecCCceEEEEccCCcCchHHH
Q 008675 209 PSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-T-GAKHRAYLKNGPKNEIIVSAGALGSPQLL 273 (557)
Q Consensus 209 ~~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~-~-g~~~~v~~~~~aa~~VIlaaGa~~sp~lL 273 (557)
+.|++++++++|++|..+++ ++.+|++.+. + |+..++. ++.||+|+|.--.+.+|
T Consensus 196 ~~gv~i~~~~~v~~i~~~~~-----~v~~v~~~~~~~~g~~~~i~-----~D~vv~a~G~~p~~~~~ 252 (320)
T 1trb_A 196 NGNIILHTNRTLEEVTGDQM-----GVTGVRLRDTQNSDNIESLD-----VAGLFVAIGHSPNTAIF 252 (320)
T ss_dssp TSSEEEECSCEEEEEEECSS-----SEEEEEEECCTTCCCCEEEE-----CSEEEECSCEEESCGGG
T ss_pred cCCeEEEcCceeEEEEcCCC-----ceEEEEEEeccCCCceEEEE-----cCEEEEEeCCCCChHHh
Confidence 46899999999999987654 7888998752 2 5444554 79999999965555444
No 214
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=96.04 E-value=0.029 Score=58.14 Aligned_cols=33 Identities=30% Similarity=0.476 Sum_probs=30.4
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 203 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPE 203 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCc
Confidence 479999999999999999999 999999999853
No 215
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=96.01 E-value=0.0031 Score=67.28 Aligned_cols=34 Identities=32% Similarity=0.537 Sum_probs=31.0
Q ss_pred ccEEEECCCcchHHHHHhhhc---CCeEEEEeeCCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGSP 66 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae---g~~VlvLE~G~~~ 66 (557)
.||+|||+|++|+.+|.+|++ +.+|+|+|+.+..
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 489999999999999999998 5899999999764
No 216
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=95.99 E-value=0.0022 Score=69.48 Aligned_cols=35 Identities=29% Similarity=0.415 Sum_probs=32.3
Q ss_pred CccEEEECCCcchHHHHHhhhc-C--------CeEEEEeeCC-CC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-N--------ASVLLLERGG-SP 66 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g--------~~VlvLE~G~-~~ 66 (557)
..+|+|||+|++|+++|++|++ | .+|+|+|+.+ ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 4799999999999999999999 8 9999999987 54
No 217
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=95.99 E-value=0.0037 Score=64.34 Aligned_cols=33 Identities=12% Similarity=0.459 Sum_probs=29.2
Q ss_pred cEEEECCCcchHHHHHhhhc-C--CeEEEEeeCCCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-N--ASVLLLERGGSP 66 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g--~~VlvLE~G~~~ 66 (557)
-|||||+|+||+.+|.+|++ | .+|+|+|+++..
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~ 37 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDM 37 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 38999999999999999998 6 579999998643
No 218
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=95.93 E-value=0.025 Score=58.40 Aligned_cols=33 Identities=30% Similarity=0.504 Sum_probs=30.3
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
-.++|||+|.+|+-+|..|++ |.+|.|+|+++.
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~ 201 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDR 201 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCc
Confidence 469999999999999999999 999999999853
No 219
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=95.91 E-value=0.046 Score=52.92 Aligned_cols=57 Identities=12% Similarity=0.073 Sum_probs=41.8
Q ss_pred CCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEe-CCCCeeEEeeecCCceEEEEccCCcCchHHHHhh
Q 008675 210 SGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLS 276 (557)
Q Consensus 210 ~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~-~~g~~~~v~~~~~aa~~VIlaaGa~~sp~lLl~S 276 (557)
.|+++++++.|++|..+++ ++.+|++.+ .+|+..++. ++.||+|+|..-...+|..+
T Consensus 192 ~gv~v~~~~~v~~i~~~~~-----~v~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~l~~~ 249 (311)
T 2q0l_A 192 DKIEFLTPYVVEEIKGDAS-----GVSSLSIKNTATNEKRELV-----VPGFFIFVGYDVNNAVLKQE 249 (311)
T ss_dssp TTEEEETTEEEEEEEEETT-----EEEEEEEEETTTCCEEEEE-----CSEEEECSCEEECCGGGBCT
T ss_pred CCeEEEeCCEEEEEECCCC-----cEeEEEEEecCCCceEEEe-----cCEEEEEecCccChhhhhcc
Confidence 5899999999999987654 777888874 256555554 68999999976554555433
No 220
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=95.85 E-value=0.0041 Score=63.13 Aligned_cols=31 Identities=29% Similarity=0.567 Sum_probs=28.2
Q ss_pred EEEECCCcchHHHHHhhhc-C--CeEEEEeeCCC
Q 008675 35 YIIIGGGTAGCPLAATLSQ-N--ASVLLLERGGS 65 (557)
Q Consensus 35 vIIVGsG~aG~~~A~~Lae-g--~~VlvLE~G~~ 65 (557)
|||||+|+||+.+|.+|++ + .+|+|||+...
T Consensus 5 VvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 5 VVVVGGGTGGATAAKYIKLADPSIEVTLIEPNET 38 (401)
T ss_dssp EEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSS
T ss_pred EEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCC
Confidence 8999999999999999987 4 69999999864
No 221
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=95.84 E-value=0.032 Score=57.14 Aligned_cols=33 Identities=36% Similarity=0.547 Sum_probs=30.2
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~ 183 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKANMHVTLLDTAAR 183 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCc
Confidence 469999999999999999999 999999999754
No 222
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=95.77 E-value=0.033 Score=58.60 Aligned_cols=54 Identities=24% Similarity=0.327 Sum_probs=41.2
Q ss_pred CCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEe-CCCCeeEEeeecCCceEEEEccCCcCchHHH
Q 008675 210 SGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLL 273 (557)
Q Consensus 210 ~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~-~~g~~~~v~~~~~aa~~VIlaaGa~~sp~lL 273 (557)
.|+++++++.|++|.-+++ ++++|.+.+ .+|+..++. ++.||+|+|..-+..+|
T Consensus 404 ~gV~v~~~~~v~~i~~~~~-----~v~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~pn~~~l 458 (521)
T 1hyu_A 404 KNVDIILNAQTTEVKGDGS-----KVVGLEYRDRVSGDIHSVA-----LAGIFVQIGLLPNTHWL 458 (521)
T ss_dssp TTEEEECSEEEEEEEECSS-----SEEEEEEEETTTCCEEEEE-----CSEEEECCCEEESCGGG
T ss_pred CCcEEEeCCEEEEEEcCCC-----cEEEEEEEeCCCCceEEEE-----cCEEEECcCCCCCchHH
Confidence 5899999999999986554 788999986 346655664 68999999966444444
No 223
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=95.66 E-value=0.05 Score=56.30 Aligned_cols=33 Identities=27% Similarity=0.474 Sum_probs=30.1
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 208 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPR 208 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCc
Confidence 469999999999999999999 999999999853
No 224
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=95.62 E-value=0.038 Score=57.40 Aligned_cols=33 Identities=27% Similarity=0.419 Sum_probs=30.5
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 217 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQ 217 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCc
Confidence 479999999999999999999 999999999864
No 225
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=95.59 E-value=0.071 Score=52.17 Aligned_cols=58 Identities=16% Similarity=0.066 Sum_probs=41.2
Q ss_pred CCCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEeC-CCCeeEEeeecCCceEEEEccCCcCchHHHHhhc
Q 008675 209 PSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277 (557)
Q Consensus 209 ~~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~-~g~~~~v~~~~~aa~~VIlaaGa~~sp~lLl~Sg 277 (557)
+.|+++++++.|++|..+ + ++.+|.+.+. +|+..++. ++.||+|+|.--...+|..++
T Consensus 203 ~~gv~v~~~~~v~~i~~~-~-----~~~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~l~~~~ 261 (335)
T 2zbw_A 203 EGRLEVLTPYELRRVEGD-E-----RVRWAVVFHNQTQEELALE-----VDAVLILAGYITKLGPLANWG 261 (335)
T ss_dssp TTSSEEETTEEEEEEEES-S-----SEEEEEEEETTTCCEEEEE-----CSEEEECCCEEEECGGGGGSC
T ss_pred cCCeEEecCCcceeEccC-C-----CeeEEEEEECCCCceEEEe-----cCEEEEeecCCCCchHhhhcc
Confidence 358899999999999763 3 6778888743 46545554 799999999665545555444
No 226
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=95.57 E-value=0.0084 Score=62.83 Aligned_cols=36 Identities=11% Similarity=0.206 Sum_probs=31.8
Q ss_pred CCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 30 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 30 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
.+...|||||||+||+.+|.+|++ +.+|+|||+.+.
T Consensus 40 ~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 40 SDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp CSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 345679999999999999999999 999999999753
No 227
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=95.54 E-value=0.073 Score=55.47 Aligned_cols=33 Identities=27% Similarity=0.462 Sum_probs=30.0
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 232 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDT 232 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecccc
Confidence 468999999999999999999 999999998854
No 228
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=95.46 E-value=0.059 Score=56.22 Aligned_cols=33 Identities=30% Similarity=0.461 Sum_probs=30.4
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 208 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGS 208 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCc
Confidence 469999999999999999999 999999999864
No 229
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=95.35 E-value=0.068 Score=52.14 Aligned_cols=53 Identities=13% Similarity=0.286 Sum_probs=39.2
Q ss_pred CCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEe-CCCCeeEEeeecCCceEEEEccCCcCchHHH
Q 008675 210 SGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLL 273 (557)
Q Consensus 210 ~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~-~~g~~~~v~~~~~aa~~VIlaaGa~~sp~lL 273 (557)
.|++++++++|++|..+ + ++.+|++.+ .+|+..++. ++.||+|+|..-+..+|
T Consensus 201 ~gv~i~~~~~v~~i~~~-~-----~v~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~l 254 (325)
T 2q7v_A 201 PKMKFIWDTAVEEIQGA-D-----SVSGVKLRNLKTGEVSELA-----TDGVFIFIGHVPNTAFV 254 (325)
T ss_dssp TTEEEECSEEEEEEEES-S-----SEEEEEEEETTTCCEEEEE-----CSEEEECSCEEESCGGG
T ss_pred CCceEecCCceEEEccC-C-----cEEEEEEEECCCCcEEEEE-----cCEEEEccCCCCChHHH
Confidence 58999999999999763 3 677898875 356655554 79999999965444444
No 230
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=95.33 E-value=0.096 Score=54.12 Aligned_cols=33 Identities=27% Similarity=0.341 Sum_probs=30.0
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~ 200 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDR 200 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCc
Confidence 369999999999999999999 999999998753
No 231
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=95.23 E-value=0.0089 Score=61.34 Aligned_cols=56 Identities=14% Similarity=0.287 Sum_probs=41.1
Q ss_pred hcCCCCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCCeeEEeeecCCceEEEEccCCcCchHHHHhhc
Q 008675 206 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277 (557)
Q Consensus 206 ~~~~~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~v~~~~~aa~~VIlaaGa~~sp~lLl~Sg 277 (557)
..++.|+++++++.|++|. .+ ++.+.+.+|+..++. ++.||+++|.-. +.++..|+
T Consensus 209 ~l~~~GV~~~~~~~v~~v~--~~--------~~~~~~~~g~~~~i~-----~d~vi~~~G~~~-~~~~~~~~ 264 (430)
T 3hyw_A 209 LFAERNIDWIANVAVKAIE--PD--------KVIYEDLNGNTHEVP-----AKFTMFMPSFQG-PEVVASAG 264 (430)
T ss_dssp HHHHTTCEEECSCEEEEEC--SS--------EEEEECTTSCEEEEE-----CSEEEEECEEEC-CHHHHTTC
T ss_pred HHHhCCeEEEeCceEEEEe--CC--------ceEEEeeCCCceEee-----cceEEEeccCCC-chHHHhcc
Confidence 4456799999999999983 33 456666667666664 799999999644 46677676
No 232
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=95.20 E-value=0.033 Score=57.88 Aligned_cols=33 Identities=24% Similarity=0.458 Sum_probs=30.0
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 219 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGLGSETHLVIRGET 219 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCc
Confidence 469999999999999999999 999999999854
No 233
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=95.03 E-value=0.12 Score=53.43 Aligned_cols=33 Identities=27% Similarity=0.352 Sum_probs=30.1
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 214 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDK 214 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Confidence 469999999999999999999 999999999853
No 234
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=94.93 E-value=0.16 Score=52.55 Aligned_cols=33 Identities=24% Similarity=0.460 Sum_probs=29.8
Q ss_pred ccEEEECCCcchHHHHHhhhc--CCeEEEEeeCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGS 65 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae--g~~VlvLE~G~~ 65 (557)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~ 194 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQ 194 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCc
Confidence 479999999999999999987 899999999853
No 235
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=94.85 E-value=0.099 Score=53.90 Aligned_cols=34 Identities=21% Similarity=0.329 Sum_probs=30.3
Q ss_pred CccEEEECCCcchHHHHHhhhc---CCeEEEEeeCCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGS 65 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae---g~~VlvLE~G~~ 65 (557)
.-.|+|||+|..|+-+|..|++ +.+|.++++.+.
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~ 263 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASA 263 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSS
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCC
Confidence 4579999999999999999988 679999999864
No 236
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=94.74 E-value=0.085 Score=54.50 Aligned_cols=33 Identities=24% Similarity=0.311 Sum_probs=30.3
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 205 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPR 205 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCc
Confidence 479999999999999999999 999999999853
No 237
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=94.53 E-value=0.18 Score=53.50 Aligned_cols=32 Identities=25% Similarity=0.443 Sum_probs=29.9
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 153 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 185 (565)
T 3ntd_A 153 HATVVGGGFIGLEMMESLHHLGIKTTLLELADQ 185 (565)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred EEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCc
Confidence 79999999999999999999 999999999863
No 238
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=94.50 E-value=0.071 Score=55.71 Aligned_cols=33 Identities=15% Similarity=0.400 Sum_probs=29.7
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 216 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDH 216 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCc
Confidence 469999999999999999999 999999998853
No 239
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=94.34 E-value=0.15 Score=52.85 Aligned_cols=31 Identities=19% Similarity=0.266 Sum_probs=28.1
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
-.++|||+|..|+-+|..|++ |.+|.++|+.
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 219 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS 219 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 368999999999999999999 9999999884
No 240
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=94.20 E-value=0.12 Score=50.21 Aligned_cols=57 Identities=16% Similarity=0.102 Sum_probs=40.6
Q ss_pred CCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEe-CCCCeeEEeeecCCceEEEEccCCcCchHHHHhhc
Q 008675 210 SGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277 (557)
Q Consensus 210 ~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~-~~g~~~~v~~~~~aa~~VIlaaGa~~sp~lLl~Sg 277 (557)
.|+++++++.|++|..++ .+.+|.+.+ .+|+..++. ++.||+|+|..-.+.+|..++
T Consensus 202 ~gv~~~~~~~v~~i~~~~------~~~~v~~~~~~~g~~~~~~-----~D~vv~a~G~~p~~~~~~~~~ 259 (332)
T 3lzw_A 202 SKVNVLTPFVPAELIGED------KIEQLVLEEVKGDRKEILE-----IDDLIVNYGFVSSLGPIKNWG 259 (332)
T ss_dssp SSCEEETTEEEEEEECSS------SCCEEEEEETTSCCEEEEE-----CSEEEECCCEECCCGGGGGSS
T ss_pred CCeEEEeCceeeEEecCC------ceEEEEEEecCCCceEEEE-----CCEEEEeeccCCCchHHhhcC
Confidence 478899999999987543 345777776 244445554 799999999776666665555
No 241
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=94.19 E-value=0.17 Score=52.51 Aligned_cols=30 Identities=13% Similarity=0.242 Sum_probs=28.1
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
.++|||+|..|+-+|..|++ |.+|.++|+.
T Consensus 187 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 217 (488)
T 3dgz_A 187 KTLVVGASYVALECAGFLTGIGLDTTVMMRS 217 (488)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred eEEEECCCHHHHHHHHHHHHcCCceEEEEcC
Confidence 59999999999999999999 9999999986
No 242
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=94.15 E-value=0.31 Score=50.37 Aligned_cols=33 Identities=24% Similarity=0.337 Sum_probs=30.0
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 221 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDK 221 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCc
Confidence 469999999999999999999 999999998754
No 243
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=94.05 E-value=0.15 Score=54.32 Aligned_cols=33 Identities=27% Similarity=0.460 Sum_probs=30.1
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 221 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERGIEVTLVEMANQ 221 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCc
Confidence 469999999999999999999 999999998753
No 244
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=93.91 E-value=0.14 Score=53.07 Aligned_cols=33 Identities=30% Similarity=0.530 Sum_probs=30.0
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 192 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~ 225 (484)
T 3o0h_A 192 KSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDL 225 (484)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCc
Confidence 479999999999999999999 999999999853
No 245
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=93.32 E-value=0.13 Score=53.10 Aligned_cols=34 Identities=24% Similarity=0.346 Sum_probs=30.3
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
.-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~ 204 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKE 204 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCc
Confidence 3479999999999999999999 999999999753
No 246
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=92.69 E-value=0.43 Score=49.70 Aligned_cols=32 Identities=25% Similarity=0.446 Sum_probs=26.8
Q ss_pred cEEEECCCcchHHHHHhhhc-C--------------CeEEEEeeCCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-N--------------ASVLLLERGGS 65 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g--------------~~VlvLE~G~~ 65 (557)
.++|||+|+.|+-+|..|++ + .+|.|+|+++.
T Consensus 219 ~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~ 265 (502)
T 4g6h_A 219 SIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPI 265 (502)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSS
T ss_pred ceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccc
Confidence 49999999999999998875 2 57888888864
No 247
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=92.53 E-value=0.071 Score=54.77 Aligned_cols=36 Identities=19% Similarity=0.386 Sum_probs=32.5
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
...+++|||+|++|+-+|..|++ |.+|.|+|+++..
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 184 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRP 184 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccc
Confidence 45789999999999999999999 9999999998643
No 248
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=92.26 E-value=0.39 Score=54.36 Aligned_cols=32 Identities=9% Similarity=0.144 Sum_probs=29.4
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
-.++|||+|..|+-+|..|++ |.+|.|+|+.+
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~ 317 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARS 317 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCS
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCC
Confidence 369999999999999999999 99999999975
No 249
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=92.09 E-value=0.49 Score=49.11 Aligned_cols=33 Identities=24% Similarity=0.342 Sum_probs=27.7
Q ss_pred ccEEEECCCcchHHHHHhhhc----CCeEEEEeeCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ----NASVLLLERGGS 65 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae----g~~VlvLE~G~~ 65 (557)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~ 224 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDM 224 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCC
Confidence 468999999999988888876 789999998753
No 250
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=92.03 E-value=0.1 Score=50.51 Aligned_cols=33 Identities=21% Similarity=0.406 Sum_probs=30.5
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
.++|||+|..|+=+|..|++ |.+|.|+|+++..
T Consensus 147 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 147 RLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDEL 180 (312)
T ss_dssp EEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred EEEEECCCHHHHHHHHHHHhcCCEEEEEeccccc
Confidence 69999999999999999999 9999999998653
No 251
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=91.96 E-value=0.56 Score=48.74 Aligned_cols=33 Identities=21% Similarity=0.326 Sum_probs=27.0
Q ss_pred ccEEEECCCcchHHHHHhhhc----CCeEEEEeeCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ----NASVLLLERGGS 65 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae----g~~VlvLE~G~~ 65 (557)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~ 228 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNL 228 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCc
Confidence 368999999999988888875 678999988753
No 252
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=91.54 E-value=0.15 Score=42.85 Aligned_cols=31 Identities=19% Similarity=0.426 Sum_probs=29.0
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
.++|||.|..|..+|..|.+ |.+|+++|+-.
T Consensus 9 ~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 9 HALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 59999999999999999999 99999999864
No 253
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=91.48 E-value=0.11 Score=44.52 Aligned_cols=32 Identities=25% Similarity=0.388 Sum_probs=29.1
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
-.++|||+|..|..+|..|.+ |.+|+++++..
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 459999999999999999998 99999999854
No 254
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.47 E-value=0.11 Score=43.73 Aligned_cols=30 Identities=33% Similarity=0.649 Sum_probs=28.3
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
.++|+|+|..|..+|..|.+ |.+|+++|+.
T Consensus 8 ~v~I~G~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 49999999999999999999 9999999985
No 255
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=91.36 E-value=0.11 Score=52.28 Aligned_cols=34 Identities=26% Similarity=0.278 Sum_probs=31.2
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
-.++|||+|..|+-+|..|++ |.+|.|+|+++..
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~ 181 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYP 181 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCcc
Confidence 369999999999999999999 9999999998754
No 256
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=91.21 E-value=0.13 Score=42.94 Aligned_cols=30 Identities=33% Similarity=0.513 Sum_probs=28.0
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
.++|||+|..|..+|..|.+ |.+|.++++.
T Consensus 6 ~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 6 YIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 59999999999999999999 9999999874
No 257
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=90.62 E-value=0.14 Score=52.82 Aligned_cols=34 Identities=24% Similarity=0.409 Sum_probs=31.2
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
-.++|||+|..|+-+|..|++ |.+|.|+|+++..
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 206 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERI 206 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcc
Confidence 479999999999999999999 9999999998653
No 258
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=90.36 E-value=0.2 Score=42.83 Aligned_cols=31 Identities=16% Similarity=0.208 Sum_probs=28.6
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
--++|+|+|..|..+|..|.+ |.+|+++|+-
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 359999999999999999998 9999999985
No 259
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=90.33 E-value=0.18 Score=48.59 Aligned_cols=33 Identities=27% Similarity=0.506 Sum_probs=30.3
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
-.++|||+|..|+-+|..|++ |.+|.|+|+...
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~ 186 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDA 186 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeeccccc
Confidence 469999999999999999999 999999998754
No 260
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=90.18 E-value=0.17 Score=52.10 Aligned_cols=34 Identities=29% Similarity=0.540 Sum_probs=31.1
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
.-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 204 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGE 204 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCc
Confidence 3579999999999999999999 999999999864
No 261
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=89.98 E-value=0.15 Score=50.78 Aligned_cols=34 Identities=41% Similarity=0.561 Sum_probs=30.9
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
-.++|||+|..|+-+|..|++ |.+|.|+|+++..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 178 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMF 178 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCee
Confidence 469999999999999999999 9999999998643
No 262
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=88.57 E-value=0.25 Score=50.77 Aligned_cols=33 Identities=21% Similarity=0.315 Sum_probs=30.6
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 201 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDA 201 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCc
Confidence 479999999999999999999 999999999864
No 263
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=88.19 E-value=0.29 Score=49.51 Aligned_cols=35 Identities=34% Similarity=0.431 Sum_probs=31.5
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
.-.++|||+|..|+-+|..|++ |.+|.|+|+++..
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 180 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRL 180 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcc
Confidence 3479999999999999999999 9999999998653
No 264
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=87.94 E-value=0.29 Score=39.25 Aligned_cols=30 Identities=27% Similarity=0.432 Sum_probs=27.6
Q ss_pred cEEEECCCcchHHHHHhhhc-C-CeEEEEeeC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-N-ASVLLLERG 63 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g-~~VlvLE~G 63 (557)
.++|+|+|..|..+|..|.+ | .+|.++++.
T Consensus 7 ~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 7 NICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp EEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 58999999999999999999 8 899999885
No 265
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=87.73 E-value=0.26 Score=41.20 Aligned_cols=30 Identities=23% Similarity=0.443 Sum_probs=27.8
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
.++|+|+|..|..+|..|.+ |.+|.++++.
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 49999999999999999999 9999999875
No 266
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=87.59 E-value=0.21 Score=51.77 Aligned_cols=34 Identities=35% Similarity=0.562 Sum_probs=31.1
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
.-+++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 220 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDH 220 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGG
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCc
Confidence 4579999999999999999999 999999999854
No 267
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=87.38 E-value=0.34 Score=50.27 Aligned_cols=34 Identities=21% Similarity=0.372 Sum_probs=30.9
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
-.++|||+|..|+-+|..|++ |.+|.|+|+++..
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 229 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTC 229 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccch
Confidence 469999999999999999999 9999999998653
No 268
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=87.26 E-value=0.31 Score=48.24 Aligned_cols=33 Identities=24% Similarity=0.483 Sum_probs=28.0
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
.++|||+|..|+-+|..|++ |.+|.++|+++..
T Consensus 168 ~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~ 201 (369)
T 3d1c_A 168 QYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGL 201 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECC----
T ss_pred EEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCC
Confidence 69999999999999999999 9999999998643
No 269
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=86.85 E-value=0.38 Score=49.25 Aligned_cols=33 Identities=18% Similarity=0.361 Sum_probs=30.0
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCe-EEEEeeCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NAS-VLLLERGGS 65 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~-VlvLE~G~~ 65 (557)
-.|+|||+|.+|+=+|..|++ +.+ |.|+++++.
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~ 247 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGG 247 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCC
T ss_pred CEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCC
Confidence 469999999999999999999 888 999999753
No 270
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=86.57 E-value=0.42 Score=48.78 Aligned_cols=33 Identities=15% Similarity=0.299 Sum_probs=30.8
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
.++|||+|..|+-+|..|++ |.+|.|+|+++..
T Consensus 149 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l 182 (437)
T 4eqs_A 149 KVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKI 182 (437)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCC
T ss_pred EEEEECCccchhhhHHHHHhcCCcceeeeeeccc
Confidence 69999999999999999999 9999999998754
No 271
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=86.53 E-value=0.45 Score=49.02 Aligned_cols=33 Identities=9% Similarity=0.118 Sum_probs=30.2
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
-.|+|||+|.+|+=+|..|++ |.+|.|+++.+.
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC
Confidence 369999999999999999999 999999998754
No 272
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=86.17 E-value=0.41 Score=49.59 Aligned_cols=34 Identities=24% Similarity=0.351 Sum_probs=31.0
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
-.++|||+|..|+-+|..|++ |.+|.|+|+++..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~ 220 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGL 220 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcc
Confidence 479999999999999999999 9999999998653
No 273
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=86.16 E-value=0.52 Score=49.57 Aligned_cols=33 Identities=18% Similarity=0.282 Sum_probs=31.0
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
-.|+|||+|..|+-+|..|++ +.+|.|+++.+.
T Consensus 179 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 179 RRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 479999999999999999999 999999999976
No 274
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=86.16 E-value=0.48 Score=49.89 Aligned_cols=34 Identities=15% Similarity=0.264 Sum_probs=31.3
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
-.|+|||+|..|+-+|..|++ +.+|.|+++.+.+
T Consensus 186 krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNW 220 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCC
T ss_pred CeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCc
Confidence 469999999999999999999 9999999999753
No 275
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=86.09 E-value=0.47 Score=49.41 Aligned_cols=34 Identities=18% Similarity=0.308 Sum_probs=31.0
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
-.++|||+|..|+-+|..|++ |.+|.|+|+++..
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 211 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRI 211 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSS
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEecCCcc
Confidence 469999999999999999999 9999999998653
No 276
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=86.07 E-value=0.42 Score=49.33 Aligned_cols=34 Identities=26% Similarity=0.393 Sum_probs=30.9
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
-.++|||+|..|+-+|..|++ |.+|.|+|+++..
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 213 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHV 213 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCcc
Confidence 469999999999999999999 9999999998643
No 277
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=86.04 E-value=0.33 Score=44.23 Aligned_cols=30 Identities=30% Similarity=0.490 Sum_probs=27.9
Q ss_pred EEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 35 YIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 35 vIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
++|||+|..|..+|..|.+ |.+|+++|+-.
T Consensus 3 iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 3 VIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp EEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 8999999999999999999 99999999753
No 278
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=85.71 E-value=0.48 Score=48.54 Aligned_cols=34 Identities=29% Similarity=0.545 Sum_probs=31.1
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
-.++|||+|..|+-+|..|++ |.+|.++|+++..
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 183 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERV 183 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCcc
Confidence 379999999999999999999 9999999998753
No 279
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=85.58 E-value=0.5 Score=45.78 Aligned_cols=31 Identities=29% Similarity=0.400 Sum_probs=28.5
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
.+.|||+|..|+.+|..|++ |.+|.++.|..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 4 RIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 48999999999999999999 99999998863
No 280
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=85.53 E-value=0.53 Score=45.37 Aligned_cols=31 Identities=26% Similarity=0.519 Sum_probs=28.3
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
-+.|||+|..|..+|..|++ |.+|.++++..
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 49999999999999999999 99999998753
No 281
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=85.46 E-value=0.4 Score=49.45 Aligned_cols=34 Identities=18% Similarity=0.355 Sum_probs=31.0
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
-.++|||+|..|+-+|..|++ |.+|.|+|+++..
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~ 212 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEI 212 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcc
Confidence 479999999999999999999 9999999998643
No 282
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=85.44 E-value=0.57 Score=48.01 Aligned_cols=34 Identities=32% Similarity=0.386 Sum_probs=30.8
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
-.++|||+|..|+-+|..|++ |.+|.|+|+++..
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 184 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERV 184 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSST
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCch
Confidence 369999999999999999999 9999999998643
No 283
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=85.36 E-value=0.58 Score=45.43 Aligned_cols=57 Identities=14% Similarity=0.180 Sum_probs=40.5
Q ss_pred CCCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEeC-CCCeeEEeeecCCceEEEEccCCcCchHHH
Q 008675 209 PSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQLL 273 (557)
Q Consensus 209 ~~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~-~g~~~~v~~~~~aa~~VIlaaGa~~sp~lL 273 (557)
+.|+++++++.|++|..++++ .++.+|++.+. +|+..++. ++.||+|+|..-...+|
T Consensus 207 ~~gv~i~~~~~v~~i~~~~~~---~~v~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~~ 264 (333)
T 1vdc_A 207 NPKIDVIWNSSVVEAYGDGER---DVLGGLKVKNVVTGDVSDLK-----VSGLFFAIGHEPATKFL 264 (333)
T ss_dssp CTTEEEECSEEEEEEEESSSS---SSEEEEEEEETTTCCEEEEE-----CSEEEECSCEEESCGGG
T ss_pred CCCeeEecCCceEEEeCCCCc---cceeeEEEEecCCCceEEEe-----cCEEEEEeCCccchHHh
Confidence 358899999999999765431 25778888753 46555554 79999999976555544
No 284
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=85.20 E-value=0.49 Score=46.03 Aligned_cols=31 Identities=26% Similarity=0.478 Sum_probs=28.6
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
.+.|||+|..|+.+|..|++ |.+|.++.|..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 4 NILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp EEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 48999999999999999999 99999998864
No 285
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=85.05 E-value=0.51 Score=47.69 Aligned_cols=34 Identities=38% Similarity=0.670 Sum_probs=31.1
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
-.++|||+|..|+-+|..|++ |.+|.++|+.+..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~ 178 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKLGLSVTILEAGDEL 178 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcc
Confidence 469999999999999999999 9999999998653
No 286
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=84.97 E-value=0.62 Score=45.40 Aligned_cols=33 Identities=33% Similarity=0.478 Sum_probs=30.3
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
-.++|||+|..|+-+|..|++ |.+|.++++++.
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~ 189 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDE 189 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCc
Confidence 469999999999999999999 999999998754
No 287
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=84.77 E-value=0.82 Score=46.86 Aligned_cols=62 Identities=15% Similarity=0.168 Sum_probs=42.9
Q ss_pred ECCCCccccHHHhhhhcCCCCcEEEcCcEEEEEEEe--cCCCCCCeEEEEEEEeCCCCeeEEeeecCCceEEEEccCCc
Q 008675 191 FDQNGQRHTAADLLEYANPSGLTLLLHASVHKVLFR--IKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGAL 267 (557)
Q Consensus 191 ~~~~g~r~~~~~~l~~~~~~n~~i~~~~~V~~i~~~--~~~~~~~~~~gV~~~~~~g~~~~v~~~~~aa~~VIlaaGa~ 267 (557)
++.+|...-+..+...+++.|.+|++++.|++|..+ ++ ++++|.. +|+. +. ++.||+|+|..
T Consensus 236 ~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~-----~~~~V~~---~g~~--~~-----ad~VV~a~~~~ 299 (453)
T 2bcg_G 236 YPMYGLGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTG-----KFEGVKT---KLGT--FK-----APLVIADPTYF 299 (453)
T ss_dssp EETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTT-----EEEEEEE---TTEE--EE-----CSCEEECGGGC
T ss_pred eeCCCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCC-----eEEEEEE---CCeE--EE-----CCEEEECCCcc
Confidence 334554332333445555679999999999999988 54 8888875 3533 33 68899999975
No 288
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=84.73 E-value=0.55 Score=49.51 Aligned_cols=34 Identities=15% Similarity=0.336 Sum_probs=31.3
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
-.|+|||+|..|+-+|..|++ +.+|.|++|.+.+
T Consensus 192 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 192 KRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANY 226 (549)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCc
Confidence 469999999999999999999 9999999999753
No 289
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=84.24 E-value=0.52 Score=45.69 Aligned_cols=30 Identities=27% Similarity=0.406 Sum_probs=27.7
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
-|.|||+|..|.-.|..++. |++|+|+|..
T Consensus 8 ~VaViGaG~MG~giA~~~a~~G~~V~l~D~~ 38 (319)
T 3ado_A 8 DVLIVGSGLVGRSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred eEEEECCcHHHHHHHHHHHhCCCeEEEEECC
Confidence 48999999999999999999 9999999864
No 290
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=84.09 E-value=0.55 Score=48.26 Aligned_cols=31 Identities=32% Similarity=0.651 Sum_probs=28.8
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
-+||+|+|--|..+|..|++ |.+|+|||+-.
T Consensus 5 ~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 5 KIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp EEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 49999999999999999998 99999999864
No 291
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=84.02 E-value=0.62 Score=47.95 Aligned_cols=34 Identities=21% Similarity=0.279 Sum_probs=30.9
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
-.++|||+|..|+-+|..|++ |.+|.++|+++..
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 211 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARLGSKVTVLARNTLF 211 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCcc
Confidence 469999999999999999999 9999999998643
No 292
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=83.04 E-value=0.77 Score=38.58 Aligned_cols=32 Identities=19% Similarity=0.274 Sum_probs=28.2
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
--+.|||+|..|..+|..|.+ |.+|.+.++..
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 358999999999999999999 98899998753
No 293
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=83.04 E-value=0.83 Score=44.27 Aligned_cols=35 Identities=29% Similarity=0.494 Sum_probs=31.5
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
.-.++|||+|..|+-+|..|++ |.+|.+++++...
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~ 208 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHL 208 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcc
Confidence 3469999999999999999999 9999999998754
No 294
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=82.57 E-value=0.57 Score=44.93 Aligned_cols=31 Identities=32% Similarity=0.437 Sum_probs=28.6
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
.+.|||+|..|+.+|..|++ |.+|.++.|..
T Consensus 4 kI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 4 SVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 48999999999999999999 99999999873
No 295
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=82.54 E-value=0.75 Score=47.34 Aligned_cols=34 Identities=24% Similarity=0.369 Sum_probs=31.0
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
-.++|||+|..|+-+|..|++ |.+|.++|+++..
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 207 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRA 207 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcC
Confidence 469999999999999999999 9999999998653
No 296
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=82.41 E-value=0.82 Score=46.16 Aligned_cols=34 Identities=35% Similarity=0.461 Sum_probs=31.1
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
-.++|||+|..|+-+|..|++ |.+|.++|+++..
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~ 187 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRV 187 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCch
Confidence 469999999999999999999 9999999998754
No 297
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=82.27 E-value=1.9 Score=46.05 Aligned_cols=63 Identities=16% Similarity=0.176 Sum_probs=43.3
Q ss_pred EECCCCccccHHHhhhhcCCCCcEEEcCcEEEEEEEecC-CCCCCeEEEEEEEeCCCCeeEEeeecCCceEEEEccC
Q 008675 190 IFDQNGQRHTAADLLEYANPSGLTLLLHASVHKVLFRIK-GKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAG 265 (557)
Q Consensus 190 ~~~~~g~r~~~~~~l~~~~~~n~~i~~~~~V~~i~~~~~-~~~~~~~~gV~~~~~~g~~~~v~~~~~aa~~VIlaaG 265 (557)
.++..|...-+..+.+.+...|.+|++++.|++|+++++ + +++||.. .+|+. +. ++.||..+.
T Consensus 371 ~yp~GG~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g----~v~gV~~--~~Ge~--i~-----A~~VVs~~~ 434 (650)
T 1vg0_A 371 LFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESR----KCKAVID--QFGQR--II-----SKHFIIEDS 434 (650)
T ss_dssp EEETTCTTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTC----CEEEEEE--TTSCE--EE-----CSEEEEEGG
T ss_pred EEeCCchhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCC----eEEEEEe--CCCCE--EE-----cCEEEEChh
Confidence 344555433333355666778999999999999999873 3 8999883 46754 33 677877555
No 298
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=81.93 E-value=0.71 Score=43.61 Aligned_cols=31 Identities=23% Similarity=0.379 Sum_probs=28.3
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
--|+|||+|-.|...|..|.+ |.+|.|++..
T Consensus 14 k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 14 KRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp CEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 349999999999999999999 9999999864
No 299
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=81.90 E-value=0.82 Score=45.98 Aligned_cols=34 Identities=26% Similarity=0.306 Sum_probs=30.9
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
-.++|||+|..|+-+|..|++ |.+|.++|+.+..
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~ 177 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRV 177 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcc
Confidence 469999999999999999999 9999999998754
No 300
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=81.76 E-value=0.85 Score=40.06 Aligned_cols=32 Identities=22% Similarity=0.202 Sum_probs=28.3
Q ss_pred ccEEEECCCcchHHHHHhhhc--CCeEEEEeeCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ--NASVLLLERGG 64 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae--g~~VlvLE~G~ 64 (557)
-.++|||.|..|..+|..|.+ |.+|+++|+..
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 359999999999999999976 89999999853
No 301
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=81.76 E-value=0.73 Score=45.11 Aligned_cols=30 Identities=33% Similarity=0.554 Sum_probs=28.0
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
-+.|||+|..|+.+|..|++ |.+|.++.+.
T Consensus 5 kI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 5 RICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred EEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 48999999999999999999 9999999875
No 302
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=81.69 E-value=0.74 Score=49.06 Aligned_cols=30 Identities=20% Similarity=0.318 Sum_probs=28.7
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
.++|||+|..|+-+|..|++ |.+|.|+|++
T Consensus 288 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 288 KTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 69999999999999999999 9999999987
No 303
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=81.53 E-value=0.97 Score=43.03 Aligned_cols=31 Identities=16% Similarity=0.255 Sum_probs=28.3
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
-+.|||+|..|..+|..|++ |.+|.+.++..
T Consensus 6 kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 48999999999999999999 99999998753
No 304
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=81.49 E-value=0.88 Score=43.23 Aligned_cols=30 Identities=20% Similarity=0.174 Sum_probs=27.9
Q ss_pred EEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 35 YIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 35 vIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
+.|||+|..|..+|..|++ |.+|.++++..
T Consensus 3 i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 3 ITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred EEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 7899999999999999999 99999998864
No 305
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=81.42 E-value=0.95 Score=40.89 Aligned_cols=31 Identities=16% Similarity=0.281 Sum_probs=28.5
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
.+.|||+|..|..+|..|++ |.+|.++++..
T Consensus 21 ~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~ 52 (209)
T 2raf_A 21 EITIFGKGNMGQAIGHNFEIAGHEVTYYGSKD 52 (209)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 58999999999999999999 99999998764
No 306
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=81.09 E-value=0.99 Score=41.21 Aligned_cols=30 Identities=20% Similarity=0.376 Sum_probs=27.6
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEee
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLER 62 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~ 62 (557)
--++|||+|..|...|..|.+ |.+|.|+..
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~GA~VtVvap 62 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEGAAITVVAP 62 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGCCCEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECC
Confidence 459999999999999999999 999999975
No 307
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=80.69 E-value=1.3 Score=42.01 Aligned_cols=33 Identities=12% Similarity=0.047 Sum_probs=29.6
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
.-.++|||+|..|+-+|..|++ | +|.+++++..
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~ 174 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV 174 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC
Confidence 3579999999999999999999 9 9999998754
No 308
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=80.51 E-value=1 Score=46.04 Aligned_cols=34 Identities=21% Similarity=0.254 Sum_probs=30.9
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
-.++|||+|..|+-+|..|++ |.+|.++|+++..
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 182 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENL 182 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcc
Confidence 469999999999999999999 9999999998654
No 309
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=80.48 E-value=0.96 Score=42.18 Aligned_cols=33 Identities=24% Similarity=0.407 Sum_probs=29.2
Q ss_pred CccEEEECCCcchHHHHHhhhc-CC-eEEEEeeCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGG 64 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~-~VlvLE~G~ 64 (557)
...|+|||+|..|+.+|..|+. |. +|.|+++..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 3569999999999999999999 95 899998864
No 310
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=80.02 E-value=1.1 Score=47.07 Aligned_cols=32 Identities=13% Similarity=0.116 Sum_probs=29.2
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
-.++|||+|..|+=+|.-++. |.+|.|+++..
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~ 256 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSLGYDVTVAVRSI 256 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEESSC
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCeEEEecccc
Confidence 359999999999999999999 99999999854
No 311
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=79.93 E-value=0.97 Score=46.00 Aligned_cols=62 Identities=16% Similarity=0.205 Sum_probs=42.4
Q ss_pred ECCCCccccHHHhhhhcCCCCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCCeeEEeeecCCceEEEEccCCc
Q 008675 191 FDQNGQRHTAADLLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGAL 267 (557)
Q Consensus 191 ~~~~g~r~~~~~~l~~~~~~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~v~~~~~aa~~VIlaaGa~ 267 (557)
++.+|...-...+...+++.|.+|++++.|++|..+++ ++++|.. +|+. +. ++.||+|+|..
T Consensus 228 ~p~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~-----~v~~v~~---~g~~--~~-----ad~VV~a~~~~ 289 (433)
T 1d5t_A 228 YPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIMENG-----KVVGVKS---EGEV--AR-----CKQLICDPSYV 289 (433)
T ss_dssp EETTCTTHHHHHHHHHHHHHTCCCBCSCCCCEEEEETT-----EEEEEEE---TTEE--EE-----CSEEEECGGGC
T ss_pred EeCcCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEeCC-----EEEEEEE---CCeE--EE-----CCEEEECCCCC
Confidence 34555332222344445556899999999999998776 8888773 4543 33 78999999975
No 312
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=79.70 E-value=0.99 Score=45.59 Aligned_cols=31 Identities=23% Similarity=0.259 Sum_probs=28.9
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
.|||||.|-.|..+|..|.+ |.+|++||+-.
T Consensus 6 ~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 6 RVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred eEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 49999999999999999999 99999999864
No 313
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=79.64 E-value=2.2 Score=39.03 Aligned_cols=49 Identities=18% Similarity=0.253 Sum_probs=35.7
Q ss_pred hcCC-CCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCCeeEEeeecCCceEEEEccCCcCc
Q 008675 206 YANP-SGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGS 269 (557)
Q Consensus 206 ~~~~-~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~v~~~~~aa~~VIlaaGa~~s 269 (557)
.+++ +|++++ +++|++|..+++ ++.+|... +|+ ++. ++.||+|+|....
T Consensus 77 ~~~~~~gv~i~-~~~v~~i~~~~~-----~v~~v~~~--~g~--~i~-----a~~VV~A~G~~s~ 126 (232)
T 2cul_A 77 LLEGLRPLHLF-QATATGLLLEGN-----RVVGVRTW--EGP--PAR-----GEKVVLAVGSFLG 126 (232)
T ss_dssp HHHTCTTEEEE-ECCEEEEEEETT-----EEEEEEET--TSC--CEE-----CSEEEECCTTCSS
T ss_pred HHHcCCCcEEE-EeEEEEEEEeCC-----EEEEEEEC--CCC--EEE-----CCEEEECCCCChh
Confidence 4444 599999 679999998765 77777753 564 233 7999999998543
No 314
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=79.14 E-value=1.2 Score=42.70 Aligned_cols=35 Identities=29% Similarity=0.344 Sum_probs=31.7
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
.-.++|||+|..|+-+|..|++ |.+|.++++++..
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~ 189 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTF 189 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCC
Confidence 3579999999999999999999 9999999998754
No 315
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=79.11 E-value=1.1 Score=43.21 Aligned_cols=30 Identities=30% Similarity=0.455 Sum_probs=27.7
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
.+.|||+|..|..+|..|++ |.+|.++++.
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 48999999999999999999 9999999874
No 316
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=79.09 E-value=1.1 Score=44.11 Aligned_cols=31 Identities=32% Similarity=0.462 Sum_probs=28.2
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
-.+.|||+|..|..+|..|++ |.+|.++++.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 359999999999999999999 9999999774
No 317
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=79.09 E-value=1.1 Score=43.56 Aligned_cols=27 Identities=30% Similarity=0.671 Sum_probs=25.7
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEE
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLL 60 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvL 60 (557)
.+.|||+|..|+.+|..|++ |.+|.++
T Consensus 21 kI~IiGaGa~G~~~a~~L~~~G~~V~l~ 48 (318)
T 3hwr_A 21 KVAIMGAGAVGCYYGGMLARAGHEVILI 48 (318)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEEE
T ss_pred cEEEECcCHHHHHHHHHHHHCCCeEEEE
Confidence 48999999999999999999 9999998
No 318
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=79.05 E-value=1.1 Score=43.49 Aligned_cols=31 Identities=26% Similarity=0.441 Sum_probs=28.2
Q ss_pred cEEEECCCcchHHHHHhhhc-CC--eEEEEeeCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NA--SVLLLERGG 64 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~--~VlvLE~G~ 64 (557)
-+.|||+|..|..+|..|++ |. +|.++++..
T Consensus 9 kI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 9 KLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 59999999999999999999 87 999998863
No 319
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=78.05 E-value=1.2 Score=46.60 Aligned_cols=30 Identities=17% Similarity=0.276 Sum_probs=28.3
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
.++|||+|..|+-+|..|++ |.+|.|+|+.
T Consensus 212 ~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 212 KTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred eEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 59999999999999999999 9999999985
No 320
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=77.81 E-value=1.3 Score=43.91 Aligned_cols=35 Identities=26% Similarity=0.451 Sum_probs=30.8
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CC-eEEEEeeCCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGGS 65 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae-g~-~VlvLE~G~~ 65 (557)
.+--|+|+|+|.+|..+|..|.. |. +|.++++-..
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gl 223 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGI 223 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCc
Confidence 45679999999999999999988 97 9999999753
No 321
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=77.54 E-value=1.5 Score=42.40 Aligned_cols=32 Identities=25% Similarity=0.430 Sum_probs=28.7
Q ss_pred ccEEEECCCcchHHHHHhhhc-CC-eEEEEeeCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGG 64 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~-~VlvLE~G~ 64 (557)
.-+.|||+|..|..+|..|++ |. +|.++++..
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 359999999999999999999 87 999998864
No 322
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=77.44 E-value=1.2 Score=45.86 Aligned_cols=31 Identities=29% Similarity=0.472 Sum_probs=28.5
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
.-+.|||.|..|+.+|..|++ |.+|.++++.
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~ 40 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIGHDVFCLDVD 40 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred ceEEEECcCHHHHHHHHHHHhCCCEEEEEECC
Confidence 458999999999999999999 9999999875
No 323
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=77.00 E-value=1.3 Score=42.98 Aligned_cols=28 Identities=25% Similarity=0.433 Sum_probs=26.7
Q ss_pred EEEECCCcchHHHHHhhhc-CCeEEEEee
Q 008675 35 YIIIGGGTAGCPLAATLSQ-NASVLLLER 62 (557)
Q Consensus 35 vIIVGsG~aG~~~A~~Lae-g~~VlvLE~ 62 (557)
+.|||+|..|..+|..|++ |.+|.++++
T Consensus 3 I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 3 VSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 7899999999999999999 999999987
No 324
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=76.57 E-value=1.7 Score=41.47 Aligned_cols=34 Identities=21% Similarity=0.351 Sum_probs=31.1
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
-.++|||+|..|+-+|..|++ +.+|.++++++..
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~ 182 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDEF 182 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCC
Confidence 469999999999999999999 9999999998754
No 325
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=76.49 E-value=1.1 Score=41.07 Aligned_cols=31 Identities=16% Similarity=0.135 Sum_probs=27.8
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
-.++|+|+|..|..+|..|.+ |. |+++|+-.
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 359999999999999999999 89 99998753
No 326
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=76.17 E-value=1.8 Score=38.85 Aligned_cols=29 Identities=24% Similarity=0.385 Sum_probs=26.9
Q ss_pred EEEEC-CCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 35 YIIIG-GGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 35 vIIVG-sG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
+.||| +|..|..+|..|++ |.+|.++++.
T Consensus 3 i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 3 VALLGGTGNLGKGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred EEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 78999 99999999999999 9999999875
No 327
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=75.92 E-value=1.4 Score=42.69 Aligned_cols=31 Identities=26% Similarity=0.375 Sum_probs=28.2
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
-+.|||+|..|...|..|++ |++|.+.++..
T Consensus 8 kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 8 DVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred eEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 48999999999999999999 99999998753
No 328
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=75.90 E-value=1.6 Score=44.80 Aligned_cols=31 Identities=26% Similarity=0.369 Sum_probs=28.5
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
-|.|||+|..|..+|..|++ |.+|+++++..
T Consensus 39 kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 59999999999999999999 99999998753
No 329
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=75.84 E-value=1.6 Score=43.21 Aligned_cols=36 Identities=22% Similarity=0.327 Sum_probs=31.1
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CC-eEEEEeeCCCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGGSP 66 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae-g~-~VlvLE~G~~~ 66 (557)
.+--|+|+|+|.+|..+|..|.. |. +|.|+++-+..
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli 228 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGIL 228 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEEC
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcc
Confidence 45679999999999999999998 86 89999997543
No 330
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=75.79 E-value=2.1 Score=43.62 Aligned_cols=32 Identities=31% Similarity=0.476 Sum_probs=29.1
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
--|.|||+|..|..+|..|++ |.+|++.++..
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 87 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNE 87 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcH
Confidence 359999999999999999999 99999998864
No 331
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=75.72 E-value=1.7 Score=44.25 Aligned_cols=29 Identities=28% Similarity=0.303 Sum_probs=27.2
Q ss_pred EEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 35 YIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 35 vIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
+.|||+|..|+.+|..|++ |.+|.++++.
T Consensus 3 I~VIG~G~vG~~~A~~la~~G~~V~~~d~~ 32 (436)
T 1mv8_A 3 ISIFGLGYVGAVCAGCLSARGHEVIGVDVS 32 (436)
T ss_dssp EEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 7899999999999999999 9999999875
No 332
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=75.71 E-value=1.9 Score=41.90 Aligned_cols=31 Identities=26% Similarity=0.449 Sum_probs=28.3
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
-.++|||+|..|+-+|..|++ + +|.++++..
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 479999999999999999999 7 799999874
No 333
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=75.68 E-value=1.5 Score=42.78 Aligned_cols=32 Identities=25% Similarity=0.497 Sum_probs=28.9
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
+.-+.|||+|..|+.+|..|++ |.+|.++.+.
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 3568999999999999999999 9999999875
No 334
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=75.64 E-value=1.6 Score=43.04 Aligned_cols=31 Identities=29% Similarity=0.373 Sum_probs=28.6
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
-.+.|||+|..|..+|..|++ |.+|.+..+.
T Consensus 30 mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCCEEEECSC
T ss_pred CeEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 369999999999999999999 9999999875
No 335
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=75.47 E-value=2.3 Score=41.46 Aligned_cols=35 Identities=20% Similarity=0.504 Sum_probs=30.4
Q ss_pred CccEEEECCCcchHHHHHhhhc-C-CeEEEEeeCCCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-N-ASVLLLERGGSP 66 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g-~~VlvLE~G~~~ 66 (557)
..-|+|||+|..|+.+|..|+. | .++.|++.....
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve 70 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS 70 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEec
Confidence 4569999999999999999999 8 489999887644
No 336
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=75.43 E-value=1.8 Score=41.60 Aligned_cols=31 Identities=35% Similarity=0.383 Sum_probs=28.0
Q ss_pred cEEEECCCcchHHHHHhhhcCCeEEEEeeCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQNASVLLLERGG 64 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Laeg~~VlvLE~G~ 64 (557)
.+.|||+|..|+.+|..|+.|.+|.++.|..
T Consensus 4 kI~IiGaGa~G~~~a~~L~~g~~V~~~~r~~ 34 (307)
T 3ego_A 4 KIGIIGGGSVGLLCAYYLSLYHDVTVVTRRQ 34 (307)
T ss_dssp EEEEECCSHHHHHHHHHHHTTSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhcCCceEEEECCH
Confidence 4899999999999999999778999998864
No 337
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=74.79 E-value=1.7 Score=42.46 Aligned_cols=32 Identities=19% Similarity=0.245 Sum_probs=28.6
Q ss_pred ccEEEECCCcchHHHHHhhhc-CC-eEEEEeeCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGG 64 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~-~VlvLE~G~ 64 (557)
.-+.|||+|..|..+|..|++ |. +|.|++.-.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 359999999999999999999 87 999998753
No 338
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=73.93 E-value=1.7 Score=44.33 Aligned_cols=31 Identities=23% Similarity=0.352 Sum_probs=28.4
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
.+.|||+|..|+.+|..|++ |.+|.++++..
T Consensus 4 kI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 48999999999999999999 99999998753
No 339
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=73.81 E-value=1.8 Score=43.23 Aligned_cols=33 Identities=24% Similarity=0.251 Sum_probs=29.3
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
.--|+|||+|..|..+|..|.. |.+|.+.++-.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3569999999999999999888 99999998864
No 340
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=73.69 E-value=2.1 Score=43.85 Aligned_cols=54 Identities=22% Similarity=0.203 Sum_probs=36.3
Q ss_pred CCCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEeC-------------CCCeeEEeeecCCceEEEEccCCcCch
Q 008675 209 PSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-------------TGAKHRAYLKNGPKNEIIVSAGALGSP 270 (557)
Q Consensus 209 ~~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~-------------~g~~~~v~~~~~aa~~VIlaaGa~~sp 270 (557)
+.|+++++++.+++|.-++++ .++++|++.+. +|+..++. ++.||+|+|.-..+
T Consensus 269 ~~gv~~~~~~~~~~i~~~~~~---~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~-----~d~Vi~a~G~~p~~ 335 (460)
T 1cjc_A 269 SRAWGLRFFRSPQQVLPSPDG---RRAAGIRLAVTRLEGIGEATRAVPTGDVEDLP-----CGLVLSSIGYKSRP 335 (460)
T ss_dssp SEEEEEECSEEEEEEEECTTS---SSEEEEEEEEEEEESSGGGCEEEEEEEEEEEE-----CSEEEECCCEECCC
T ss_pred CceEEEECCCChheEEcCCCC---ceEEEEEEEEEEEccccCCCcccCCCceEEEE-----cCEEEECCCCCCCC
Confidence 368999999999998765310 15777776521 24334453 79999999976555
No 341
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=73.46 E-value=2 Score=38.90 Aligned_cols=30 Identities=27% Similarity=0.297 Sum_probs=27.6
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
-+.|||+|..|..+|..|++ |.+|.++++.
T Consensus 30 ~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 30 KVGILGSGDFARSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 59999999999999999999 9999999875
No 342
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=73.13 E-value=3 Score=39.79 Aligned_cols=33 Identities=21% Similarity=0.317 Sum_probs=29.6
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
.-.+.|||.|..|..+|..|++ |.+|.+.++..
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSST
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3469999999999999999999 99999998764
No 343
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=73.10 E-value=2.1 Score=39.59 Aligned_cols=33 Identities=24% Similarity=0.361 Sum_probs=29.3
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
...+.|||+|..|..+|..|++ |.+|.+.++..
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 3468999999999999999999 99999998764
No 344
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=73.03 E-value=2 Score=41.36 Aligned_cols=29 Identities=24% Similarity=0.425 Sum_probs=26.8
Q ss_pred EEEECCCcchHHHHHhhhc-CC--eEEEEeeC
Q 008675 35 YIIIGGGTAGCPLAATLSQ-NA--SVLLLERG 63 (557)
Q Consensus 35 vIIVGsG~aG~~~A~~Lae-g~--~VlvLE~G 63 (557)
+.|||+|..|..+|..|+. |. .|.+++..
T Consensus 3 I~VIGaG~vG~~la~~la~~g~~~eV~L~D~~ 34 (304)
T 2v6b_A 3 VGVVGTGFVGSTAAFALVLRGSCSELVLVDRD 34 (304)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 7899999999999999999 87 89999875
No 345
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=72.75 E-value=1.7 Score=42.99 Aligned_cols=30 Identities=27% Similarity=0.413 Sum_probs=27.8
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
.+.|||+|..|..+|..|++ |.+|.++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 59999999999999999999 9999999875
No 346
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=72.50 E-value=2 Score=42.51 Aligned_cols=33 Identities=21% Similarity=0.175 Sum_probs=29.3
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
.--|+|||+|..|..+|..|.. |.+|.++++-.
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4569999999999999999988 99999998764
No 347
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=72.07 E-value=2.1 Score=41.64 Aligned_cols=31 Identities=29% Similarity=0.433 Sum_probs=28.2
Q ss_pred cEEEECCCcchHHHHHhhhc-CC-eEEEEeeCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGG 64 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~-~VlvLE~G~ 64 (557)
-+.|||+|..|..+|..|+. |. +|.+++.-.
T Consensus 16 kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 16 KISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 59999999999999999999 87 999998853
No 348
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=72.03 E-value=2.2 Score=40.26 Aligned_cols=31 Identities=23% Similarity=0.364 Sum_probs=27.7
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
--++|+|+|..|..+|..|++ |.+|.+..|.
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 359999999999999999999 9999998765
No 349
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=71.81 E-value=2.2 Score=43.73 Aligned_cols=33 Identities=27% Similarity=0.347 Sum_probs=29.0
Q ss_pred ccEEEECCCcchHHHHHhhhc-CC-eEEEEeeCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGGS 65 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~-~VlvLE~G~~ 65 (557)
-.|+|||+|..|+=+|..|.+ |. +|.++++...
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDR 299 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCS
T ss_pred CEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCc
Confidence 469999999999999999888 86 6999998764
No 350
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=71.63 E-value=3.4 Score=35.80 Aligned_cols=54 Identities=19% Similarity=0.090 Sum_probs=36.7
Q ss_pred hhcCCCCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCCeeEEeeecCCceEEEEccCCcCchHHHHhhc
Q 008675 205 EYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277 (557)
Q Consensus 205 ~~~~~~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~v~~~~~aa~~VIlaaGa~~sp~lLl~Sg 277 (557)
..+++.|++++++ +|++|..+++ . +.+...+| ++. ++.||+|+|.. |.++...|
T Consensus 64 ~~~~~~gv~v~~~-~v~~i~~~~~-----~---~~v~~~~g---~i~-----ad~vI~A~G~~--~~~~~~~g 117 (180)
T 2ywl_A 64 AHARRYGAEVRPG-VVKGVRDMGG-----V---FEVETEEG---VEK-----AERLLLCTHKD--PTLPSLLG 117 (180)
T ss_dssp HHHHHTTCEEEEC-CCCEEEECSS-----S---EEEECSSC---EEE-----EEEEEECCTTC--CHHHHHHT
T ss_pred HHHHHcCCEEEeC-EEEEEEEcCC-----E---EEEEECCC---EEE-----ECEEEECCCCC--CCccccCC
Confidence 3455678999999 9999987654 2 33333345 343 69999999975 45655555
No 351
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=71.39 E-value=2.8 Score=39.02 Aligned_cols=34 Identities=26% Similarity=0.377 Sum_probs=29.3
Q ss_pred CccEEEECCCcchHHHHHhhhc-CC-eEEEEeeCCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGGS 65 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~-~VlvLE~G~~ 65 (557)
..-|+|||+|..|+.+|..|+. |. ++.|++....
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v 63 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDV 63 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBC
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 4579999999999999999999 84 8889887643
No 352
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=71.26 E-value=3.1 Score=40.28 Aligned_cols=31 Identities=23% Similarity=0.454 Sum_probs=28.3
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
-.+.|||.|..|..+|..|++ |.+|.+.++.
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEcCC
Confidence 369999999999999999999 9999998775
No 353
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=71.14 E-value=2.3 Score=46.52 Aligned_cols=32 Identities=16% Similarity=0.098 Sum_probs=29.7
Q ss_pred ccEEEEC--CCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 33 YDYIIIG--GGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 33 ~DvIIVG--sG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
-.|+||| +|..|+-+|..|++ |.+|.|+|+++
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 3699998 89999999999999 99999999987
No 354
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=70.55 E-value=2.7 Score=39.93 Aligned_cols=31 Identities=32% Similarity=0.491 Sum_probs=28.0
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
.+.|||.|..|..+|..|++ |.+|.+.++..
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 38899999999999999999 99999998753
No 355
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=70.47 E-value=2.8 Score=40.06 Aligned_cols=30 Identities=23% Similarity=0.362 Sum_probs=27.7
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
-+.|||.|..|..+|..|++ |.+|.+.++.
T Consensus 5 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~ 35 (302)
T 2h78_A 5 QIAFIGLGHMGAPMATNLLKAGYLLNVFDLV 35 (302)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSS
T ss_pred EEEEEeecHHHHHHHHHHHhCCCeEEEEcCC
Confidence 48999999999999999999 9999999775
No 356
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=70.23 E-value=2.5 Score=40.97 Aligned_cols=29 Identities=24% Similarity=0.315 Sum_probs=26.9
Q ss_pred EEEECCCcchHHHHHhhhc-CC--eEEEEeeC
Q 008675 35 YIIIGGGTAGCPLAATLSQ-NA--SVLLLERG 63 (557)
Q Consensus 35 vIIVGsG~aG~~~A~~Lae-g~--~VlvLE~G 63 (557)
+.|||+|..|..+|..|++ |. .|.++++.
T Consensus 3 I~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~ 34 (319)
T 1a5z_A 3 IGIVGLGRVGSSTAFALLMKGFAREMVLIDVD 34 (319)
T ss_dssp EEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 7899999999999999999 88 99999875
No 357
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=69.95 E-value=5 Score=41.23 Aligned_cols=49 Identities=14% Similarity=0.190 Sum_probs=33.5
Q ss_pred hhhhcCCCC-cEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCCeeEEeeecCCceEEEEccCC
Q 008675 203 LLEYANPSG-LTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGA 266 (557)
Q Consensus 203 ~l~~~~~~n-~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~v~~~~~aa~~VIlaaGa 266 (557)
+...+...| ++|++++.|++|..+++ . |.+...+|+. +. ++.||+|+|.
T Consensus 261 l~~~l~~~g~~~i~~~~~V~~i~~~~~-----~---v~v~~~~g~~--~~-----ad~vI~a~~~ 310 (495)
T 2vvm_A 261 FWEEAAGTGRLGYVFGCPVRSVVNERD-----A---ARVTARDGRE--FV-----AKRVVCTIPL 310 (495)
T ss_dssp HHHHHHTTTCEEEESSCCEEEEEECSS-----S---EEEEETTCCE--EE-----EEEEEECCCG
T ss_pred HHHHhhhcCceEEEeCCEEEEEEEcCC-----E---EEEEECCCCE--EE-----cCEEEECCCH
Confidence 444444455 99999999999987655 2 3343345643 33 6999999995
No 358
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=69.73 E-value=2.6 Score=40.43 Aligned_cols=31 Identities=19% Similarity=0.181 Sum_probs=28.2
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
-.+.|||.|..|..+|..|++ |.+|.+.++.
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 358999999999999999999 9999999775
No 359
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=69.65 E-value=2.7 Score=41.67 Aligned_cols=31 Identities=32% Similarity=0.470 Sum_probs=28.1
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
--++|+|+|..|..+|..|.. |.+|+++++.
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~ 198 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVN 198 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 458999999999999999988 9999999875
No 360
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=69.62 E-value=2.5 Score=43.21 Aligned_cols=31 Identities=32% Similarity=0.335 Sum_probs=28.0
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
--++|+|+|..|..+|.+|+. |.+|++.|+.
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~ 297 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAGARVIVTEID 297 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 358999999999999999999 9999998764
No 361
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=69.52 E-value=2.6 Score=39.96 Aligned_cols=31 Identities=29% Similarity=0.454 Sum_probs=28.0
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
-+.|||.|..|..+|..|++ |.+|.+.++..
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred EEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 37899999999999999999 99999988753
No 362
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=69.51 E-value=2.9 Score=39.99 Aligned_cols=30 Identities=27% Similarity=0.433 Sum_probs=27.5
Q ss_pred cEEEEC-CCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 34 DYIIIG-GGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 34 DvIIVG-sG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
-+.||| .|..|..+|..|++ |.+|.++++.
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~ 54 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRASGYPISILDRE 54 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCEEEECTT
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 499999 99999999999999 9999999764
No 363
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=69.47 E-value=3.1 Score=40.37 Aligned_cols=31 Identities=26% Similarity=0.452 Sum_probs=27.7
Q ss_pred ccEEEECCCcchHHHHHhhhc-CC-eEEEEeeC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERG 63 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~-~VlvLE~G 63 (557)
.-+.|||+|..|..+|..|+. |. +|.|++.-
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~ 37 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIV 37 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 359999999999999999999 87 89999875
No 364
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=69.46 E-value=2.8 Score=39.96 Aligned_cols=35 Identities=23% Similarity=0.391 Sum_probs=30.2
Q ss_pred CCccEEEECCCcchHHHHHhhhc-C-CeEEEEeeCCC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ-N-ASVLLLERGGS 65 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae-g-~~VlvLE~G~~ 65 (557)
...-|+|||+|..|+.+|..|+. | .++.|++....
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~V 71 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKV 71 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCcc
Confidence 45689999999999999999999 8 58999987643
No 365
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=69.37 E-value=3.3 Score=39.49 Aligned_cols=31 Identities=26% Similarity=0.337 Sum_probs=27.8
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
-.+.|||.|..|..+|..|++ |.+|.+.++.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 36 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLM 36 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 358999999999999999999 9999998764
No 366
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=69.04 E-value=3.3 Score=39.82 Aligned_cols=32 Identities=19% Similarity=0.220 Sum_probs=28.8
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
-.+.|||.|..|..+|..|++ |.+|.+.++..
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 359999999999999999999 99999997753
No 367
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=69.01 E-value=2.6 Score=42.22 Aligned_cols=32 Identities=22% Similarity=0.316 Sum_probs=28.2
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
--|+|||+|.+|..+|..|.. |.+|+++++..
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 469999999999999999888 99999998753
No 368
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=69.00 E-value=2.5 Score=43.60 Aligned_cols=31 Identities=29% Similarity=0.472 Sum_probs=28.2
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
-|.|||+|..|..+|..|++ |.+|.+.++..
T Consensus 7 kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 7 TVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 48999999999999999999 99999998753
No 369
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=68.87 E-value=3 Score=43.70 Aligned_cols=34 Identities=18% Similarity=0.371 Sum_probs=30.6
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
-.|+|||+|..|+-+|..|++ +.+|.+++|.+..
T Consensus 187 k~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~ 221 (542)
T 1w4x_A 187 QRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHF 221 (542)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcc
Confidence 468999999999999999999 9999999998643
No 370
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=68.87 E-value=2.8 Score=39.04 Aligned_cols=29 Identities=24% Similarity=0.528 Sum_probs=26.8
Q ss_pred EEEECCCcchHHHHHhhhc-C-CeEEEEeeC
Q 008675 35 YIIIGGGTAGCPLAATLSQ-N-ASVLLLERG 63 (557)
Q Consensus 35 vIIVGsG~aG~~~A~~Lae-g-~~VlvLE~G 63 (557)
+.|||+|..|..+|..|++ | .+|.+.++.
T Consensus 3 i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~ 33 (263)
T 1yqg_A 3 VYFLGGGNMAAAVAGGLVKQGGYRIYIANRG 33 (263)
T ss_dssp EEEECCSHHHHHHHHHHHHHCSCEEEEECSS
T ss_pred EEEECchHHHHHHHHHHHHCCCCeEEEECCC
Confidence 7899999999999999999 9 999998775
No 371
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=68.81 E-value=3.5 Score=42.05 Aligned_cols=31 Identities=19% Similarity=0.243 Sum_probs=28.7
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
-|.|||.|.+|..+|..|.+ |.+|.+.|+..
T Consensus 11 ~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 11 KVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp EEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 59999999999999999999 99999999875
No 372
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=68.57 E-value=2.8 Score=40.30 Aligned_cols=30 Identities=23% Similarity=0.368 Sum_probs=27.3
Q ss_pred cEEEECCCcchHHHHHhhhc-C--CeEEEEeeC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-N--ASVLLLERG 63 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g--~~VlvLE~G 63 (557)
-+.|||+|..|..+|..|++ | ..|.++++.
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~ 35 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDAN 35 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCC
Confidence 38899999999999999999 8 689999885
No 373
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=68.46 E-value=2.9 Score=41.22 Aligned_cols=31 Identities=26% Similarity=0.411 Sum_probs=28.1
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
--++|+|+|.+|..+|..|.. |.+|.++++.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~ 199 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDIN 199 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 469999999999999999988 9999999875
No 374
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=68.18 E-value=2.5 Score=41.94 Aligned_cols=32 Identities=16% Similarity=0.244 Sum_probs=28.9
Q ss_pred cEEEECCCcchHHHHHhhhc-C-------CeEEEEeeCCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-N-------ASVLLLERGGS 65 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g-------~~VlvLE~G~~ 65 (557)
-+.|||+|..|+.+|..|++ | .+|.++++...
T Consensus 23 kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred EEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 49999999999999999999 9 89999988643
No 375
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=68.08 E-value=2.9 Score=39.34 Aligned_cols=29 Identities=24% Similarity=0.358 Sum_probs=26.6
Q ss_pred EEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 35 YIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 35 vIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
+.|||+|..|..+|..|.+ |.+|.++++.
T Consensus 3 i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 32 (279)
T 2f1k_A 3 IGVVGLGLIGASLAGDLRRRGHYLIGVSRQ 32 (279)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEcCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 7899999999999999999 9999998764
No 376
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=68.08 E-value=3.3 Score=40.01 Aligned_cols=31 Identities=26% Similarity=0.217 Sum_probs=28.7
Q ss_pred cEEEECCCcchHHHHHhhhc-C-CeEEEEeeCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-N-ASVLLLERGG 64 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g-~~VlvLE~G~ 64 (557)
.+.|||.|..|..+|..|++ | .+|.+.++..
T Consensus 26 ~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 26 TIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred eEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 49999999999999999999 9 9999998864
No 377
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=67.94 E-value=4.4 Score=42.49 Aligned_cols=35 Identities=20% Similarity=0.510 Sum_probs=30.0
Q ss_pred CccEEEECCCcchHHHHHhhhc-CC-eEEEEeeCCCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGGSP 66 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~-~VlvLE~G~~~ 66 (557)
..-|+|||+|..|+.+|..|+. |. ++.|++.....
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~Ve 363 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS 363 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCccc
Confidence 3569999999999999999999 84 89999877543
No 378
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=67.79 E-value=3.5 Score=39.28 Aligned_cols=30 Identities=27% Similarity=0.420 Sum_probs=27.5
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
.+.|||+|..|..+|..|++ |.+|.+.++.
T Consensus 7 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 37 (299)
T 1vpd_A 7 KVGFIGLGIMGKPMSKNLLKAGYSLVVSDRN 37 (299)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred eEEEECchHHHHHHHHHHHhCCCEEEEEeCC
Confidence 49999999999999999999 9999998764
No 379
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=67.73 E-value=3.4 Score=41.85 Aligned_cols=32 Identities=16% Similarity=0.172 Sum_probs=29.0
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
...+.|||.|..|+.+|..|++ |.+|+.++-.
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did 53 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVN 53 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSC
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECC
Confidence 4579999999999999999999 9999998764
No 380
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=67.72 E-value=3.4 Score=39.50 Aligned_cols=31 Identities=19% Similarity=0.277 Sum_probs=27.7
Q ss_pred ccEEEECCCcchHHHHHhhhc-CC-eEEEEeeC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERG 63 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~-~VlvLE~G 63 (557)
-.++|+|+|.+|..+|..|++ |. +|.|..|.
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 359999999999999999999 96 99998775
No 381
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=67.71 E-value=3.1 Score=39.08 Aligned_cols=33 Identities=30% Similarity=0.533 Sum_probs=29.1
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
.--++|+|+|-+|..+|..|++ |.+|.|..|-.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3469999999999999999999 99999997764
No 382
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=67.32 E-value=4 Score=39.23 Aligned_cols=31 Identities=19% Similarity=0.277 Sum_probs=28.1
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
-.+.|||+|..|..+|..|++ |.+|.+.++.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~ 62 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRT 62 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCC
Confidence 359999999999999999999 9999998875
No 383
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=67.29 E-value=3 Score=42.17 Aligned_cols=31 Identities=19% Similarity=0.360 Sum_probs=28.3
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
..-|||.|..|+.+|..|++ |++|+++++-.
T Consensus 13 ~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~ 44 (431)
T 3ojo_A 13 KLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQ 44 (431)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ccEEEeeCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 46799999999999999999 99999998864
No 384
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=67.12 E-value=4.1 Score=39.29 Aligned_cols=31 Identities=29% Similarity=0.400 Sum_probs=28.4
Q ss_pred ccEEEECCCcchHHHHHhhhc-CC-eEEEEeeC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERG 63 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~-~VlvLE~G 63 (557)
--+.|||+|..|..+|..|+. |. .|.+++.-
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 459999999999999999999 88 99999885
No 385
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=67.04 E-value=3.3 Score=40.82 Aligned_cols=35 Identities=14% Similarity=0.224 Sum_probs=29.3
Q ss_pred CCCCccEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 29 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 29 ~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
|+..-.+.|||.|..|..+|..|++ |.+|.+.++.
T Consensus 19 Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred hhcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCC
Confidence 3444579999999999999999999 9999999775
No 386
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=66.98 E-value=3.5 Score=41.35 Aligned_cols=29 Identities=24% Similarity=0.337 Sum_probs=26.9
Q ss_pred EEEECCCcchHHHHHhhhcCCeEEEEeeC
Q 008675 35 YIIIGGGTAGCPLAATLSQNASVLLLERG 63 (557)
Q Consensus 35 vIIVGsG~aG~~~A~~Laeg~~VlvLE~G 63 (557)
+.|||.|..|+.+|..|++|.+|.++++.
T Consensus 3 I~VIG~G~vG~~~A~~La~G~~V~~~d~~ 31 (402)
T 1dlj_A 3 IAVAGSGYVGLSLGVLLSLQNEVTIVDIL 31 (402)
T ss_dssp EEEECCSHHHHHHHHHHTTTSEEEEECSC
T ss_pred EEEECCCHHHHHHHHHHhCCCEEEEEECC
Confidence 78999999999999999999899999875
No 387
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=66.74 E-value=3.3 Score=41.11 Aligned_cols=32 Identities=34% Similarity=0.458 Sum_probs=28.5
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
.--++|||+|..|..+|..|.. |.+|++.++.
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~ 200 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDIN 200 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 3469999999999999999988 9999999875
No 388
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=66.60 E-value=2.5 Score=41.46 Aligned_cols=32 Identities=19% Similarity=0.274 Sum_probs=28.9
Q ss_pred cEEEECCCcchHHHHHhhhc-C-------CeEEEEeeCCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-N-------ASVLLLERGGS 65 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g-------~~VlvLE~G~~ 65 (557)
-+.|||+|..|..+|..|++ | .+|.++++...
T Consensus 10 kI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 10 KVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred eEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 59999999999999999999 8 89999988643
No 389
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=66.49 E-value=3.6 Score=39.04 Aligned_cols=29 Identities=28% Similarity=0.536 Sum_probs=26.3
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
-++|+|+|-.|..+|..|++ | +|.+..|.
T Consensus 130 ~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 130 NIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp EEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 49999999999999999999 9 99998764
No 390
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=66.39 E-value=3.2 Score=42.23 Aligned_cols=33 Identities=21% Similarity=0.342 Sum_probs=29.8
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
.-+-|||.|..|+.+|..|++ |.+|++.++-..
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 457899999999999999999 999999998653
No 391
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=66.26 E-value=4 Score=38.78 Aligned_cols=29 Identities=24% Similarity=0.361 Sum_probs=26.8
Q ss_pred EEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 35 YIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 35 vIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
+.|||.|..|..+|..|++ |.+|.+.++.
T Consensus 3 i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~ 32 (296)
T 2gf2_A 3 VGFIGLGNMGNPMAKNLMKHGYPLIIYDVF 32 (296)
T ss_dssp EEEECCSTTHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEEeccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 7899999999999999999 9999998775
No 392
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=66.22 E-value=3.3 Score=41.29 Aligned_cols=33 Identities=24% Similarity=0.268 Sum_probs=28.7
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
.-.|+|+|+|.+|..+|..|.. |.+|.+.++..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3469999999999999998888 99999998754
No 393
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=66.16 E-value=3.6 Score=39.22 Aligned_cols=32 Identities=22% Similarity=0.327 Sum_probs=28.7
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
--+.|||.|..|..+|.+|.. |.+|++.++..
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 459999999999999999988 99999998753
No 394
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=66.09 E-value=3.7 Score=41.45 Aligned_cols=32 Identities=25% Similarity=0.284 Sum_probs=28.8
Q ss_pred ccEEEECCCcchHHHHHhhhcCCeEEEEeeCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQNASVLLLERGG 64 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Laeg~~VlvLE~G~ 64 (557)
-.+.|||.|..|+.+|..|++|.+|+++++..
T Consensus 37 mkIaVIGlG~mG~~lA~~La~G~~V~~~D~~~ 68 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQNHEVVALDIVQ 68 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTSEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHcCCeEEEEecCH
Confidence 36999999999999999999999999998753
No 395
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=65.99 E-value=5.2 Score=39.67 Aligned_cols=56 Identities=21% Similarity=0.153 Sum_probs=37.4
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCCeeEEeeecCCceEEEEccCCcCc
Q 008675 203 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGS 269 (557)
Q Consensus 203 ~l~~~~~~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~v~~~~~aa~~VIlaaGa~~s 269 (557)
++..+.+.|++|+.+++|++|..++++ . ..|.+.+ +|+..++. ++.||.|.|....
T Consensus 109 L~~~~~~~g~~i~~~~~v~~i~~~~~~----~-~~v~~~~-~g~~~~~~-----a~~vV~AdG~~S~ 164 (394)
T 1k0i_A 109 LMEAREACGATTVYQAAEVRLHDLQGE----R-PYVTFER-DGERLRLD-----CDYIAGCDGFHGI 164 (394)
T ss_dssp HHHHHHHTTCEEESSCEEEEEECTTSS----S-CEEEEEE-TTEEEEEE-----CSEEEECCCTTCS
T ss_pred HHHHHHhcCCeEEeceeEEEEEEecCC----c-eEEEEec-CCcEEEEE-----eCEEEECCCCCcH
Confidence 334444469999999999999875431 2 2466533 67544554 7999999997443
No 396
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=65.95 E-value=4.2 Score=38.21 Aligned_cols=31 Identities=16% Similarity=0.212 Sum_probs=28.2
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
-++|.|+|..|..++.+|.+ |.+|.++.|..
T Consensus 7 ~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 7 TLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp EEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred cEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 39999999999999999999 99999998854
No 397
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=65.92 E-value=3.8 Score=42.19 Aligned_cols=32 Identities=19% Similarity=0.264 Sum_probs=29.1
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
.-++.|||.|..|..+|..|++ |.+|.+.+|.
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~ 47 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSIFNRS 47 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4579999999999999999999 9999998775
No 398
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=65.86 E-value=3.5 Score=43.36 Aligned_cols=35 Identities=20% Similarity=0.504 Sum_probs=30.1
Q ss_pred CccEEEECCCcchHHHHHhhhc-C-CeEEEEeeCCCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-N-ASVLLLERGGSP 66 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g-~~VlvLE~G~~~ 66 (557)
..-|+|||+|..|+.+|..|+. | .++.|++.....
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~Ve 362 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS 362 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCc
Confidence 3569999999999999999999 8 489999887643
No 399
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=65.84 E-value=2.7 Score=39.68 Aligned_cols=31 Identities=26% Similarity=0.371 Sum_probs=28.0
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
--++|+|+|.+|..+|..|++ |.+|.|..|.
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~ 151 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRT 151 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 359999999999999999999 9999999875
No 400
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=65.82 E-value=3.8 Score=40.24 Aligned_cols=33 Identities=18% Similarity=0.426 Sum_probs=29.2
Q ss_pred CccEEEECCCcchHHHHHhhhc-C-CeEEEEeeCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-N-ASVLLLERGG 64 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g-~~VlvLE~G~ 64 (557)
..-|+|||+|..|+.+|..|+. | .++.|++...
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 4579999999999999999999 8 4899998764
No 401
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=65.80 E-value=3.3 Score=41.54 Aligned_cols=28 Identities=21% Similarity=0.387 Sum_probs=25.6
Q ss_pred cEEEECCCcchHHHHHhhhc--CCeEEEEe
Q 008675 34 DYIIIGGGTAGCPLAATLSQ--NASVLLLE 61 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae--g~~VlvLE 61 (557)
.+.|||+|..|+.+|..|++ |.+|.+++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 48899999999999999976 88999997
No 402
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=65.80 E-value=3.8 Score=38.59 Aligned_cols=32 Identities=31% Similarity=0.407 Sum_probs=28.7
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
-++|.|+|..|..++.+|.+ |.+|.++.|...
T Consensus 5 ~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 5 KILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 38999999999999999998 999999988643
No 403
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=65.63 E-value=3.6 Score=38.85 Aligned_cols=31 Identities=26% Similarity=0.430 Sum_probs=28.0
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
-.+.|||+|..|..+|..|.+ |.+|.+..|.
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~ 161 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRT 161 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECC
Confidence 359999999999999999999 9899999875
No 404
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=65.47 E-value=2.2 Score=39.13 Aligned_cols=29 Identities=21% Similarity=0.253 Sum_probs=26.8
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEee
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLER 62 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~ 62 (557)
.+.|||.|..|..+|..|.+ |.+|.++.+
T Consensus 8 kI~IIG~G~~G~sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 8 RVGIFDDGSSTVNMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp EEEEECCSCCCSCHHHHHHHTTCEEEECSS
T ss_pred EEEEEeeCHHHHHHHHHHHHCCCEEEEecC
Confidence 48999999999999999999 999998766
No 405
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=65.23 E-value=3.7 Score=39.56 Aligned_cols=30 Identities=27% Similarity=0.448 Sum_probs=27.1
Q ss_pred EEEECCCcchHHHHHhhhc---CCeEEEEeeCC
Q 008675 35 YIIIGGGTAGCPLAATLSQ---NASVLLLERGG 64 (557)
Q Consensus 35 vIIVGsG~aG~~~A~~Lae---g~~VlvLE~G~ 64 (557)
+.|||+|..|..+|..|++ +..|.++++..
T Consensus 3 I~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 3 ITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 7899999999999999987 57999999864
No 406
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=65.18 E-value=3.6 Score=39.65 Aligned_cols=31 Identities=26% Similarity=0.311 Sum_probs=28.4
Q ss_pred ccEEEECCCcchHHHHHhhhc-CC-eEEEEeeC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERG 63 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~-~VlvLE~G 63 (557)
-.+.|||.|..|..+|..|++ |. +|.+.++.
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 359999999999999999999 98 99999875
No 407
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=65.18 E-value=3.8 Score=39.16 Aligned_cols=32 Identities=25% Similarity=0.375 Sum_probs=28.7
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
--+.|||.|..|..+|.+|.. |.+|++.++-.
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 459999999999999999998 99999998753
No 408
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=64.95 E-value=3.7 Score=40.52 Aligned_cols=30 Identities=17% Similarity=0.248 Sum_probs=27.3
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEee
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLER 62 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~ 62 (557)
--|+|+|+|..|..+|.+|.+ |.+|++.++
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~GakVvv~D~ 204 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEGAKLVVTDV 204 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEcC
Confidence 459999999999999999999 999998874
No 409
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=64.57 E-value=3.8 Score=38.81 Aligned_cols=30 Identities=17% Similarity=0.370 Sum_probs=27.6
Q ss_pred cEEEECC-CcchHHHHHhhhc-CCeEEEEeeC
Q 008675 34 DYIIIGG-GTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 34 DvIIVGs-G~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
-+.|||+ |..|..+|..|++ |.+|.+.++.
T Consensus 13 ~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~ 44 (286)
T 3c24_A 13 TVAILGAGGKMGARITRKIHDSAHHLAAIEIA 44 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSSSEEEEECCS
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 4999999 9999999999999 9999998774
No 410
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=64.55 E-value=3.7 Score=38.67 Aligned_cols=29 Identities=21% Similarity=0.337 Sum_probs=26.3
Q ss_pred EEEECCCcchHHHHHhhhc-CC--eEEEEeeC
Q 008675 35 YIIIGGGTAGCPLAATLSQ-NA--SVLLLERG 63 (557)
Q Consensus 35 vIIVGsG~aG~~~A~~Lae-g~--~VlvLE~G 63 (557)
+.|||+|..|..+|..|++ |. +|.+.++.
T Consensus 4 I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 35 (281)
T 2g5c_A 4 VLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 35 (281)
T ss_dssp EEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred EEEEecCHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 7899999999999999999 87 89998764
No 411
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=64.35 E-value=3.7 Score=44.67 Aligned_cols=31 Identities=39% Similarity=0.515 Sum_probs=28.6
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
-|.|||+|..|..+|..|++ |++|++.++..
T Consensus 314 kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 314 KVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred EEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 49999999999999999999 99999998763
No 412
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=64.16 E-value=4.1 Score=42.93 Aligned_cols=34 Identities=38% Similarity=0.617 Sum_probs=30.8
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
-.+||||.|--|..+|..|.+ |..|+++|+-+..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~ 383 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESP 383 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHH
Confidence 469999999999999999999 9999999987643
No 413
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=63.70 E-value=3.7 Score=46.73 Aligned_cols=31 Identities=29% Similarity=0.464 Sum_probs=28.8
Q ss_pred cEEEECCCcchHHHHHhhhc-CC-eEEEEeeCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGG 64 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~-~VlvLE~G~ 64 (557)
.|+|||+|..|+=+|..|.+ |. +|.|+|+.+
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 79999999999999999998 85 899999986
No 414
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=63.49 E-value=3.2 Score=42.47 Aligned_cols=55 Identities=15% Similarity=0.118 Sum_probs=36.8
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCCeeEEeeecCCceEEEEccCCcCchHH
Q 008675 203 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQL 272 (557)
Q Consensus 203 ~l~~~~~~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~v~~~~~aa~~VIlaaGa~~sp~l 272 (557)
+...+.+.|++|++++.|++|..+++ ++..|.. ++.. +. ++.||+|+++....+|
T Consensus 240 l~~~l~~~g~~i~~~~~V~~i~~~~~-----~~~~v~~---~~~~--~~-----ad~vv~a~p~~~~~~l 294 (477)
T 3nks_A 240 LETHLTSRGVSVLRGQPVCGLSLQAE-----GRWKVSL---RDSS--LE-----ADHVISAIPASVLSEL 294 (477)
T ss_dssp HHHHHHHTTCEEECSCCCCEEEECGG-----GCEEEEC---SSCE--EE-----ESEEEECSCHHHHHHH
T ss_pred HHHHHHhcCCEEEeCCEEEEEEEcCC-----ceEEEEE---CCeE--EE-----cCEEEECCCHHHHHHh
Confidence 33444556999999999999998765 3234432 3432 33 6899999987555544
No 415
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=63.48 E-value=4 Score=39.37 Aligned_cols=31 Identities=19% Similarity=0.322 Sum_probs=27.8
Q ss_pred cEEEECCCcchHHHHHhhhc-CC--eEEEEeeCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NA--SVLLLERGG 64 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~--~VlvLE~G~ 64 (557)
-+.|||.|..|..+|..|.+ |. +|.+.++..
T Consensus 35 kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 35 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 59999999999999999999 88 999987753
No 416
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=63.45 E-value=5.6 Score=38.11 Aligned_cols=32 Identities=28% Similarity=0.450 Sum_probs=28.6
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
-.+.|||.|..|..+|..|++ |.+|.+.++..
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 459999999999999999999 99999987753
No 417
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=63.37 E-value=4.7 Score=41.22 Aligned_cols=32 Identities=44% Similarity=0.619 Sum_probs=29.1
Q ss_pred ccEEEECCCcchHHHHHhhhcCCeEEEEeeCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQNASVLLLERGG 64 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Laeg~~VlvLE~G~ 64 (557)
-.++|+|+|-.|..+|..|.++.+|-++|+-.
T Consensus 236 ~~v~I~GgG~ig~~lA~~L~~~~~v~iIE~d~ 267 (461)
T 4g65_A 236 RRIMIVGGGNIGASLAKRLEQTYSVKLIERNL 267 (461)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTSEEEEEESCH
T ss_pred cEEEEEcchHHHHHHHHHhhhcCceEEEecCH
Confidence 47999999999999999997789999999974
No 418
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=63.31 E-value=5.1 Score=37.89 Aligned_cols=32 Identities=19% Similarity=0.318 Sum_probs=27.9
Q ss_pred CccEEEECCCcchHHHHHhhhc-CC-eEEEEeeC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERG 63 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~-~VlvLE~G 63 (557)
.-.++|+|+|-+|..+|..|.+ |. +|.|+-|-
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt 155 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRN 155 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESC
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 3469999999999999999999 86 89998765
No 419
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=63.23 E-value=4.8 Score=35.93 Aligned_cols=30 Identities=27% Similarity=0.366 Sum_probs=27.0
Q ss_pred EEEECC-CcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 35 YIIIGG-GTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 35 vIIVGs-G~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
++|.|+ |..|..++.+|.+ |.+|.++.|..
T Consensus 3 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 3 IGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred EEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 789995 9999999999999 99999998863
No 420
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=63.12 E-value=7.7 Score=39.96 Aligned_cols=39 Identities=28% Similarity=0.460 Sum_probs=33.1
Q ss_pred CCCCCccEEEECCCcchHHHHHhhhc---CCeEEEEeeCCCC
Q 008675 28 QPVSYYDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGSP 66 (557)
Q Consensus 28 ~~~~~~DvIIVGsG~aG~~~A~~Lae---g~~VlvLE~G~~~ 66 (557)
.++..+||||||+|+||+.+|..|.+ |.+|+|||+.+..
T Consensus 7 ~~~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~ 48 (493)
T 1m6i_A 7 KAPSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPEL 48 (493)
T ss_dssp -CCSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSC
T ss_pred CCCCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 34567999999999999999998876 7899999998643
No 421
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=63.05 E-value=6.4 Score=40.72 Aligned_cols=48 Identities=21% Similarity=0.252 Sum_probs=35.9
Q ss_pred hhcCCCCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCCeeEEeeecCCceEEEEccCC
Q 008675 205 EYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGA 266 (557)
Q Consensus 205 ~~~~~~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~v~~~~~aa~~VIlaaGa 266 (557)
..+.+.|++++.+ +|++|..++++ ++++|+.. +|+ ++. ++.||.|+|+
T Consensus 181 ~~a~~~gv~~~~~-~v~~i~~~~~~----~~~~v~~~--~g~--~~~-----ad~vV~A~G~ 228 (511)
T 2weu_A 181 EYAIARGVRHVVD-DVQHVGQDERG----WISGVHTK--QHG--EIS-----GDLFVDCTGF 228 (511)
T ss_dssp HHHHHTTCEEEEC-CEEEEEECTTS----CEEEEEES--SSC--EEE-----CSEEEECCGG
T ss_pred HHHHHCCCEEEEC-eEeEEEEcCCC----CEEEEEEC--CCC--EEE-----cCEEEECCCc
Confidence 4455579999999 99999886553 67777764 564 343 7999999996
No 422
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=63.05 E-value=2.1 Score=38.85 Aligned_cols=30 Identities=33% Similarity=0.661 Sum_probs=26.6
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEE-EeeC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLL-LERG 63 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~Vlv-LE~G 63 (557)
-+.|||+|..|..+|..|++ |.+|.+ .++.
T Consensus 25 kI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~ 56 (220)
T 4huj_A 25 TYAIIGAGAIGSALAERFTAAQIPAIIANSRG 56 (220)
T ss_dssp CEEEEECHHHHHHHHHHHHHTTCCEEEECTTC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEECCC
Confidence 59999999999999999999 999888 6554
No 423
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=62.82 E-value=4.6 Score=38.90 Aligned_cols=31 Identities=16% Similarity=0.298 Sum_probs=27.5
Q ss_pred ccEEEECCCcchHHHHHhhhc-CC-eEEEEeeC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERG 63 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~-~VlvLE~G 63 (557)
--++|+|+|-+|..+|..|++ |. +|.|+-|-
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 459999999999999999999 87 89999775
No 424
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=62.74 E-value=4.6 Score=36.21 Aligned_cols=29 Identities=28% Similarity=0.499 Sum_probs=26.7
Q ss_pred EEEECC-CcchHHHHHhhhc-CCeEEEEeeC
Q 008675 35 YIIIGG-GTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 35 vIIVGs-G~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
++|.|+ |..|..++.+|.+ |.+|.++-|.
T Consensus 3 ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 3 IAVLGATGRAGSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEcCCCHHHHHHHHHHHHCCCEEEEEEec
Confidence 789997 9999999999999 9999999875
No 425
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=62.67 E-value=3.7 Score=41.67 Aligned_cols=32 Identities=16% Similarity=0.249 Sum_probs=28.8
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
-+.|||.|.+|+.+|..|.+ |.+|.+.|....
T Consensus 7 ~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 7 NVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMT 39 (439)
T ss_dssp CEEEECCHHHHHHHHHHHHTTTCCCEEEESSSS
T ss_pred EEEEEeecHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 38999999999999999988 999999998654
No 426
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=62.66 E-value=4.3 Score=39.02 Aligned_cols=30 Identities=30% Similarity=0.403 Sum_probs=26.9
Q ss_pred cEEEECCCcchHHHHHhhhc-CC-eEEEEeeC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NA-SVLLLERG 63 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~-~VlvLE~G 63 (557)
-+.|||+|..|..+|..|+. |. +|.++|.-
T Consensus 4 kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~ 35 (309)
T 1ur5_A 4 KISIIGAGFVGSTTAHWLAAKELGDIVLLDIV 35 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Confidence 48999999999999999998 85 89999874
No 427
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=62.40 E-value=4.5 Score=38.32 Aligned_cols=31 Identities=29% Similarity=0.380 Sum_probs=27.4
Q ss_pred ccEEEEC-CCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 33 YDYIIIG-GGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 33 ~DvIIVG-sG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
--++|+| +|..|..+|..|++ |.+|.++.|.
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~ 152 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK 152 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 3589999 89999999999999 9999998774
No 428
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=61.96 E-value=4.1 Score=41.87 Aligned_cols=30 Identities=27% Similarity=0.441 Sum_probs=27.6
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
.+.|||.|..|..+|..|++ |.+|.+.++.
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~ 33 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRT 33 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 58999999999999999999 9999999774
No 429
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=61.69 E-value=4.7 Score=38.23 Aligned_cols=31 Identities=16% Similarity=0.284 Sum_probs=27.1
Q ss_pred ccEEEECCCcchHHHHHhhhc-CC-eEEEEeeC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERG 63 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~-~VlvLE~G 63 (557)
--++|+|+|-+|..+|..|++ |. +|.|+.|-
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC
Confidence 459999999999999999999 87 79998765
No 430
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=61.34 E-value=4.7 Score=39.08 Aligned_cols=30 Identities=20% Similarity=0.410 Sum_probs=26.9
Q ss_pred cEEEECCCcchHHHHHhhhc-CC--eEEEEeeC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NA--SVLLLERG 63 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~--~VlvLE~G 63 (557)
-+.|||+|..|..+|..|++ |. .|.+++.-
T Consensus 7 kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 7 KVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 58999999999999999999 75 89999873
No 431
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=61.33 E-value=4.9 Score=37.40 Aligned_cols=30 Identities=20% Similarity=0.408 Sum_probs=27.5
Q ss_pred cEEEECCCcchHHHHHhhhc-CC-eEEEEeeC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NA-SVLLLERG 63 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~-~VlvLE~G 63 (557)
-++|||+|-+|..++..|.+ |. +|.|..|-
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~ 141 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRT 141 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 69999999999999999999 87 89999875
No 432
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=61.21 E-value=4.3 Score=38.33 Aligned_cols=32 Identities=22% Similarity=0.253 Sum_probs=28.0
Q ss_pred ccEEEECCCcchHHHHHhhhc-CC-eEEEEeeCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGG 64 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~-~VlvLE~G~ 64 (557)
--++|+|+|-+|..+|..|++ |. +|.|..|-.
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 359999999999999999999 87 899987764
No 433
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=61.13 E-value=4.7 Score=40.46 Aligned_cols=32 Identities=22% Similarity=0.221 Sum_probs=28.7
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
.--++|||.|..|..+|.+|.. |.+|++.|+-
T Consensus 220 GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~d 252 (435)
T 3gvp_A 220 GKQVVVCGYGEVGKGCCAALKAMGSIVYVTEID 252 (435)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3469999999999999999988 9999999874
No 434
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=60.92 E-value=5.9 Score=35.47 Aligned_cols=30 Identities=27% Similarity=0.354 Sum_probs=27.2
Q ss_pred EEEEC-CCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 35 YIIIG-GGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 35 vIIVG-sG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
++|.| +|..|..++.+|.+ |.+|.++.|..
T Consensus 3 ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 3 IFIVGSTGRVGKSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp EEEESTTSHHHHHHHHHHTTSSCEEEEEESSG
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCc
Confidence 78999 69999999999999 99999998864
No 435
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=60.89 E-value=5.3 Score=35.15 Aligned_cols=31 Identities=29% Similarity=0.362 Sum_probs=27.8
Q ss_pred cEEEECC-CcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 34 DYIIIGG-GTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 34 DvIIVGs-G~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
-++|.|+ |..|..++.+|.+ |.+|.++.|..
T Consensus 5 ~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 5 KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred EEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 3899998 9999999999999 99999998864
No 436
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=60.88 E-value=4.8 Score=39.38 Aligned_cols=34 Identities=15% Similarity=0.229 Sum_probs=29.6
Q ss_pred CccEEEECCCcchHHHHHhhhc-CC-eEEEEeeCCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGGS 65 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~-~VlvLE~G~~ 65 (557)
...|+|||+|..|+.+|..|+. |. ++.|++-...
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V 71 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQV 71 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCc
Confidence 4679999999999999999999 85 8999987643
No 437
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=60.84 E-value=4.9 Score=38.33 Aligned_cols=30 Identities=20% Similarity=0.223 Sum_probs=26.8
Q ss_pred EEEECCCcchHHHHHhhhc-CC--eEEEEeeCC
Q 008675 35 YIIIGGGTAGCPLAATLSQ-NA--SVLLLERGG 64 (557)
Q Consensus 35 vIIVGsG~aG~~~A~~Lae-g~--~VlvLE~G~ 64 (557)
+.|||+|..|..+|..|++ +. .|.|+++-.
T Consensus 3 I~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 3 LGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 7899999999999999999 76 899998753
No 438
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=60.80 E-value=5.2 Score=36.34 Aligned_cols=31 Identities=16% Similarity=0.314 Sum_probs=27.9
Q ss_pred cEEEECC-CcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 34 DYIIIGG-GTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 34 DvIIVGs-G~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
-++|.|+ |..|..+|.+|.+ |.+|.++.|..
T Consensus 23 ~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 23 RVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred eEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 4899997 9999999999999 99999998864
No 439
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=60.77 E-value=4.8 Score=41.12 Aligned_cols=30 Identities=27% Similarity=0.348 Sum_probs=27.7
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
-++|||+|..|...|..|.+ |.+|.|++..
T Consensus 14 ~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 14 DCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 48999999999999999999 9999999863
No 440
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=60.70 E-value=3.9 Score=38.08 Aligned_cols=28 Identities=25% Similarity=0.204 Sum_probs=25.2
Q ss_pred EEEECCCcchHHHHHhhhc-CCeEEEEee
Q 008675 35 YIIIGGGTAGCPLAATLSQ-NASVLLLER 62 (557)
Q Consensus 35 vIIVGsG~aG~~~A~~Lae-g~~VlvLE~ 62 (557)
+.|||.|..|..+|..|++ |.+|.+.++
T Consensus 3 I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 3 VGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred EEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 7899999999999999999 999988644
No 441
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=60.67 E-value=4.7 Score=37.61 Aligned_cols=30 Identities=27% Similarity=0.402 Sum_probs=26.9
Q ss_pred cEEEECCCcchHHHHHhhhc-CCe-EEEEeeC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NAS-VLLLERG 63 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~-VlvLE~G 63 (557)
-+.|||+|..|..+|..|++ |.+ |.+.++.
T Consensus 12 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~ 43 (266)
T 3d1l_A 12 PIVLIGAGNLATNLAKALYRKGFRIVQVYSRT 43 (266)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred eEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCC
Confidence 49999999999999999999 988 8888764
No 442
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=60.46 E-value=6.1 Score=37.36 Aligned_cols=31 Identities=23% Similarity=0.340 Sum_probs=27.4
Q ss_pred ccEEEECCCcchHHHHHhhhc-CC-eEEEEeeC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERG 63 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~-~VlvLE~G 63 (557)
--++|+|+|-+|..+|..|++ |. +|.|..|-
T Consensus 127 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~ 159 (281)
T 3o8q_A 127 ATILLIGAGGAARGVLKPLLDQQPASITVTNRT 159 (281)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTCCSEEEEEESS
T ss_pred CEEEEECchHHHHHHHHHHHhcCCCeEEEEECC
Confidence 458999999999999999999 95 99999775
No 443
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=60.44 E-value=6.3 Score=40.40 Aligned_cols=33 Identities=24% Similarity=0.329 Sum_probs=29.3
Q ss_pred ccEEEECCCcchHHHHHhhhc--CC-eEEEEeeCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ--NA-SVLLLERGGS 65 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae--g~-~VlvLE~G~~ 65 (557)
-.+.|||+|..|+.+|..|++ |. +|+++++...
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 359999999999999999997 68 9999998754
No 444
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=60.35 E-value=7.5 Score=38.97 Aligned_cols=45 Identities=16% Similarity=0.082 Sum_probs=31.3
Q ss_pred hcCCCCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCCeeEEeeecCCceEEEEccCC
Q 008675 206 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGA 266 (557)
Q Consensus 206 ~~~~~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~v~~~~~aa~~VIlaaGa 266 (557)
.+++.+ +|++++.|++|..+++ . |.+...+|+. +. ++.||+|+|.
T Consensus 213 ~~~~~g-~i~~~~~V~~i~~~~~-----~---v~v~~~~g~~--~~-----ad~vi~a~~~ 257 (431)
T 3k7m_X 213 MSQEIP-EIRLQTVVTGIDQSGD-----V---VNVTVKDGHA--FQ-----AHSVIVATPM 257 (431)
T ss_dssp HHTTCS-CEESSCCEEEEECSSS-----S---EEEEETTSCC--EE-----EEEEEECSCG
T ss_pred HHhhCC-ceEeCCEEEEEEEcCC-----e---EEEEECCCCE--EE-----eCEEEEecCc
Confidence 345556 9999999999987665 3 3333345653 33 6899999984
No 445
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=60.08 E-value=5 Score=37.35 Aligned_cols=30 Identities=17% Similarity=0.201 Sum_probs=26.3
Q ss_pred cEEEECC-C-cchHHHHHhhhc-CCeEEEEeeC
Q 008675 34 DYIIIGG-G-TAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 34 DvIIVGs-G-~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
=++|.|+ | -.|..+|.+|++ |.+|+++.+.
T Consensus 24 ~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~ 56 (266)
T 3o38_A 24 VVLVTAAAGTGIGSTTARRALLEGADVVISDYH 56 (266)
T ss_dssp EEEESSCSSSSHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCCCchHHHHHHHHHHCCCEEEEecCC
Confidence 3899998 7 489999999999 9999999775
No 446
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=60.04 E-value=5.2 Score=43.31 Aligned_cols=33 Identities=18% Similarity=0.192 Sum_probs=30.0
Q ss_pred cEEEEC--CCcchHHHHHhhhc-CCeEEEEeeCCCC
Q 008675 34 DYIIIG--GGTAGCPLAATLSQ-NASVLLLERGGSP 66 (557)
Q Consensus 34 DvIIVG--sG~aG~~~A~~Lae-g~~VlvLE~G~~~ 66 (557)
.++||| +|..|+-+|..|++ |.+|.++|+++..
T Consensus 525 ~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l 560 (690)
T 3k30_A 525 KVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQV 560 (690)
T ss_dssp EEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred EEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccc
Confidence 599999 99999999999999 9999999998643
No 447
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=59.91 E-value=4.7 Score=41.50 Aligned_cols=31 Identities=23% Similarity=0.253 Sum_probs=28.2
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
.+.|||.|..|..+|..|++ |.+|.+.++..
T Consensus 4 ~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 4 DIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 58999999999999999999 99999998753
No 448
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=59.89 E-value=6 Score=40.35 Aligned_cols=50 Identities=16% Similarity=0.236 Sum_probs=34.6
Q ss_pred CCcEEEcCcEEEEEEEecCCCCCCeEEEEEEEe--------------CCCCeeEEeeecCCceEEEEccCCcCch
Q 008675 210 SGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD--------------ATGAKHRAYLKNGPKNEIIVSAGALGSP 270 (557)
Q Consensus 210 ~n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~--------------~~g~~~~v~~~~~aa~~VIlaaGa~~sp 270 (557)
.|+++++++.+++|.-+ + ++.+|++.+ .+|+..++. ++.||+|.|.-.++
T Consensus 265 ~gv~i~~~~~~~~i~~~-~-----~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~-----~d~vi~a~G~~p~~ 328 (456)
T 1lqt_A 265 RRMVFRFLTSPIEIKGK-R-----KVERIVLGRNELVSDGSGRVAAKDTGEREELP-----AQLVVRSVGYRGVP 328 (456)
T ss_dssp EEEEEECSEEEEEEECS-S-----SCCEEEEEEEEEEECSSSSEEEEEEEEEEEEE-----CSEEEECSCEECCC
T ss_pred ceEEEEeCCCCeEEecC-C-----cEeEEEEEEEEecCCCcccccccCCCceEEEE-----cCEEEEccccccCC
Confidence 57899999999998743 2 555666652 134334453 79999999976665
No 449
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=59.86 E-value=5.3 Score=43.41 Aligned_cols=32 Identities=25% Similarity=0.338 Sum_probs=29.0
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
--|-|||+|..|.-+|..++. |..|+|+|...
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 458999999999999999999 99999998753
No 450
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=59.63 E-value=5.2 Score=38.66 Aligned_cols=32 Identities=16% Similarity=0.196 Sum_probs=28.1
Q ss_pred ccEEEECCCcchHHHHHhhhc-C----CeEEEEeeCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-N----ASVLLLERGG 64 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g----~~VlvLE~G~ 64 (557)
-.+.|||+|..|..+|..|++ | .+|.+.++..
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 359999999999999999999 8 7899987753
No 451
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=59.54 E-value=6.1 Score=37.62 Aligned_cols=31 Identities=23% Similarity=0.423 Sum_probs=27.0
Q ss_pred cEEEECCCcchHHHHHhhhcCCeEEEEeeCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQNASVLLLERGG 64 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Laeg~~VlvLE~G~ 64 (557)
-|-|||+|..|..+|..|+.|++|.+.++..
T Consensus 14 ~V~vIG~G~MG~~iA~~laaG~~V~v~d~~~ 44 (293)
T 1zej_A 14 KVFVIGAGLMGRGIAIAIASKHEVVLQDVSE 44 (293)
T ss_dssp EEEEECCSHHHHHHHHHHHTTSEEEEECSCH
T ss_pred eEEEEeeCHHHHHHHHHHHcCCEEEEEECCH
Confidence 5889999999999998887779999998753
No 452
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=59.50 E-value=5.2 Score=40.39 Aligned_cols=29 Identities=24% Similarity=0.442 Sum_probs=26.7
Q ss_pred ccEEEECCCcchHHHHHhhhc-CC---eEEEEe
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NA---SVLLLE 61 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~---~VlvLE 61 (557)
--++|+|+|.+|..+|..|.+ |. +|.|++
T Consensus 187 ~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 187 ITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred CEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 459999999999999999999 86 899998
No 453
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=59.49 E-value=5.4 Score=38.24 Aligned_cols=32 Identities=22% Similarity=0.446 Sum_probs=27.8
Q ss_pred ccEEEECCCcchHHHHHhhhc-CC--eEEEEeeCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NA--SVLLLERGG 64 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~--~VlvLE~G~ 64 (557)
.-+.|||+|..|..+|..|+. |. .|.|+|.-.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 459999999999999999998 87 899998854
No 454
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=59.37 E-value=4.6 Score=39.25 Aligned_cols=30 Identities=17% Similarity=0.160 Sum_probs=27.6
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
.+||+|.|-.|..+|..|.+ |. |+++|+.+
T Consensus 117 ~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~ 147 (336)
T 1lnq_A 117 HVVICGWSESTLECLRELRGSEV-FVLAEDEN 147 (336)
T ss_dssp EEEEESCCHHHHHHHTTGGGSCE-EEEESCGG
T ss_pred CEEEECCcHHHHHHHHHHHhCCc-EEEEeCCh
Confidence 59999999999999999998 99 99998764
No 455
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=63.78 E-value=1.9 Score=38.56 Aligned_cols=31 Identities=29% Similarity=0.298 Sum_probs=27.6
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
-+.|||+|..|..+|..|.+ |.+|.+.++..
T Consensus 21 ~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 52 (201)
T 2yjz_A 21 VVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNP 52 (201)
Confidence 48899999999999999999 99999987754
No 456
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=59.27 E-value=6.3 Score=41.31 Aligned_cols=48 Identities=19% Similarity=0.185 Sum_probs=35.3
Q ss_pred hhcCCC-CcEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCCeeEEeeecCCceEEEEccCC
Q 008675 205 EYANPS-GLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGA 266 (557)
Q Consensus 205 ~~~~~~-n~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~v~~~~~aa~~VIlaaGa 266 (557)
..+.+. |++++.+ +|++|..++++ ++++|+.. +|+ ++. ++.||+|+|+
T Consensus 202 ~~~~~~~Gv~i~~~-~V~~i~~~~~g----~~~~v~~~--~G~--~i~-----ad~vI~A~G~ 250 (550)
T 2e4g_A 202 RFATEKLGVRHVED-RVEHVQRDANG----NIESVRTA--TGR--VFD-----ADLFVDCSGF 250 (550)
T ss_dssp HHHHHHSCCEEEEC-CEEEEEECTTS----CEEEEEET--TSC--EEE-----CSEEEECCGG
T ss_pred HHHHhcCCcEEEEC-eEeEEEEcCCC----CEEEEEEC--CCC--EEE-----CCEEEECCCC
Confidence 344445 9999999 99999886553 67777764 564 343 7999999996
No 457
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=59.26 E-value=5.4 Score=38.62 Aligned_cols=32 Identities=25% Similarity=0.362 Sum_probs=28.4
Q ss_pred ccEEEECCCcchHHHHHhhhc-CC-eEEEEeeCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGG 64 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~-~VlvLE~G~ 64 (557)
--+.|||+|..|..+|..|+. |. .|.|++.-.
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 459999999999999999998 77 999998754
No 458
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=59.11 E-value=5.2 Score=37.34 Aligned_cols=30 Identities=27% Similarity=0.459 Sum_probs=27.5
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
.+.|||+|..|..+|..|.+ |.+|.+..+-
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~ 148 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRT 148 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 69999999999999999998 8899998775
No 459
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=59.06 E-value=7.1 Score=39.75 Aligned_cols=30 Identities=20% Similarity=0.334 Sum_probs=27.2
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
-++|+|+|..|..+|..|++ |.+|.++.|.
T Consensus 5 ~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~ 35 (450)
T 1ff9_A 5 SVLMLGSGFVTRPTLDVLTDSGIKVTVACRT 35 (450)
T ss_dssp EEEEECCSTTHHHHHHHHHTTTCEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHhCcCEEEEEECC
Confidence 48999999999999999999 9999998874
No 460
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=59.05 E-value=5.3 Score=41.25 Aligned_cols=33 Identities=21% Similarity=0.208 Sum_probs=29.4
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
...+.|||.|..|..+|..|++ |.+|.+.++..
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3569999999999999999999 99999998753
No 461
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=58.96 E-value=5.8 Score=40.11 Aligned_cols=33 Identities=21% Similarity=0.470 Sum_probs=29.1
Q ss_pred CccEEEECCCcchHHHHHhhhc-CC-eEEEEeeCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGG 64 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~-~VlvLE~G~ 64 (557)
..-|+|||+|..|+.+|..|+. |. ++.|++...
T Consensus 40 ~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~ 74 (434)
T 1tt5_B 40 TCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDT 74 (434)
T ss_dssp TCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCB
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 4679999999999999999999 84 899998754
No 462
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=58.80 E-value=5.6 Score=38.99 Aligned_cols=30 Identities=23% Similarity=0.413 Sum_probs=27.3
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEee
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLER 62 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~ 62 (557)
--++|+|.|..|..+|.+|.+ |.+|++.+.
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~GakVvvsD~ 206 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEAGAQLLVADT 206 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEeC
Confidence 459999999999999999999 999998864
No 463
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=58.73 E-value=6.7 Score=36.36 Aligned_cols=31 Identities=19% Similarity=0.322 Sum_probs=27.4
Q ss_pred cEEEECCCcchHHHHHhhhc-C----CeEEEEeeCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-N----ASVLLLERGG 64 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g----~~VlvLE~G~ 64 (557)
-+.|||+|..|..+|..|++ | .+|.+.++..
T Consensus 6 ~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~ 41 (262)
T 2rcy_A 6 KLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSK 41 (262)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSC
T ss_pred EEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCc
Confidence 59999999999999999999 8 6899987753
No 464
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=58.46 E-value=5.7 Score=38.50 Aligned_cols=31 Identities=16% Similarity=0.213 Sum_probs=27.5
Q ss_pred ccEEEECCCcchHHHHHhhhc-CC--eEEEEeeC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NA--SVLLLERG 63 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~--~VlvLE~G 63 (557)
--+.|||+|..|..+|..|+. |. .|.++|.-
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~ 55 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMKDLADEVALVDVM 55 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 459999999999999999999 76 89999873
No 465
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=58.38 E-value=5.3 Score=38.97 Aligned_cols=30 Identities=33% Similarity=0.375 Sum_probs=27.5
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
-+.|||.|..|..+|..|.+ |.+|.+.++.
T Consensus 10 kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~ 40 (341)
T 3ktd_A 10 PVCILGLGLIGGSLLRDLHAANHSVFGYNRS 40 (341)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred EEEEEeecHHHHHHHHHHHHCCCEEEEEeCC
Confidence 48999999999999999999 9999998765
No 466
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=58.34 E-value=6.2 Score=37.95 Aligned_cols=31 Identities=19% Similarity=0.396 Sum_probs=27.5
Q ss_pred ccEEEECCCcchHHHHHhhhc-CC-eEEEEeeC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERG 63 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~-~VlvLE~G 63 (557)
--++|+|+|-+|..+|..|++ |. +|.|.-|-
T Consensus 149 k~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 149 KTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 459999999999999999999 86 89998776
No 467
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=58.23 E-value=5.9 Score=37.26 Aligned_cols=31 Identities=16% Similarity=0.260 Sum_probs=27.1
Q ss_pred ccEEEECCCcchHHHHHhhhc-CC-eEEEEeeC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERG 63 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~-~VlvLE~G 63 (557)
--++|+|+|-+|..+|..|++ |. +|.|..|-
T Consensus 121 k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~ 153 (272)
T 3pwz_A 121 RRVLLLGAGGAVRGALLPFLQAGPSELVIANRD 153 (272)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CEEEEECccHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 459999999999999999999 94 89998764
No 468
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=58.17 E-value=7.8 Score=37.29 Aligned_cols=32 Identities=31% Similarity=0.398 Sum_probs=27.4
Q ss_pred CccEEEECCC-cchHHHHHhhhc-CCeEEEEeeC
Q 008675 32 YYDYIIIGGG-TAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 32 ~~DvIIVGsG-~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
.-.++|||+| ..|..+|..|.. |.+|.++.+.
T Consensus 177 gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 177 GKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 4579999999 579999999999 9999988664
No 469
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=57.97 E-value=11 Score=38.12 Aligned_cols=46 Identities=13% Similarity=0.104 Sum_probs=32.6
Q ss_pred cEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCCeeEEeeecCCceEEEEccCCcCchHH
Q 008675 212 LTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQL 272 (557)
Q Consensus 212 ~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~v~~~~~aa~~VIlaaGa~~sp~l 272 (557)
.+|++++.|++|..+++ + |.+...+|+. +. ++.||+|+..-...+|
T Consensus 248 ~~i~~~~~V~~i~~~~~-----~---~~v~~~~g~~--~~-----ad~vi~a~p~~~~~~l 293 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGS-----C---YSLELDNGVT--LD-----ADSVIVTAPHKAAAGM 293 (470)
T ss_dssp EEEECSCCEEEEEECSS-----S---EEEEESSSCE--EE-----ESEEEECSCHHHHHHH
T ss_pred CEEEeCCceEEEEEcCC-----e---EEEEECCCCE--EE-----CCEEEECCCHHHHHHH
Confidence 79999999999998765 3 3344346753 32 6899999986544444
No 470
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=57.81 E-value=4.9 Score=38.04 Aligned_cols=28 Identities=25% Similarity=0.411 Sum_probs=25.9
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEe
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLE 61 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE 61 (557)
-+.|||.|..|..+|..|++ |.+|.+.+
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 5 KLGFIGLGIMGSPMAINLARAGHQLHVTT 33 (295)
T ss_dssp EEEECCCSTTHHHHHHHHHHTTCEEEECC
T ss_pred EEEEEccCHHHHHHHHHHHhCCCEEEEEc
Confidence 48999999999999999999 99999886
No 471
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=57.69 E-value=6.8 Score=36.28 Aligned_cols=30 Identities=20% Similarity=0.268 Sum_probs=27.1
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
.+.|||.|..|..+|..|.+ |..|.+.++.
T Consensus 5 ~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~ 35 (259)
T 2ahr_A 5 KIGIIGVGKMASAIIKGLKQTPHELIISGSS 35 (259)
T ss_dssp EEEEECCSHHHHHHHHHHTTSSCEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEECCC
Confidence 48999999999999999999 8899988764
No 472
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=57.21 E-value=5.9 Score=40.77 Aligned_cols=32 Identities=25% Similarity=0.231 Sum_probs=28.5
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
--++|||.|..|..+|..|.. |.+|++.|+.+
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 459999999999999999988 99999998753
No 473
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=57.17 E-value=4.3 Score=44.05 Aligned_cols=31 Identities=16% Similarity=0.329 Sum_probs=28.5
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
-|-|||+|..|..+|..|++ |++|++.++..
T Consensus 316 kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 316 QAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp SEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred EEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 49999999999999999999 99999998763
No 474
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=57.15 E-value=8.3 Score=36.28 Aligned_cols=29 Identities=31% Similarity=0.524 Sum_probs=25.9
Q ss_pred EEEECCCcchHHHHHhhhcCCeEEEEeeC
Q 008675 35 YIIIGGGTAGCPLAATLSQNASVLLLERG 63 (557)
Q Consensus 35 vIIVGsG~aG~~~A~~Laeg~~VlvLE~G 63 (557)
+.|||+|..|..+|..|++|.+|.+.++.
T Consensus 4 i~iiG~G~~G~~~a~~l~~g~~V~~~~~~ 32 (289)
T 2cvz_A 4 VAFIGLGAMGYPMAGHLARRFPTLVWNRT 32 (289)
T ss_dssp EEEECCSTTHHHHHHHHHTTSCEEEECSS
T ss_pred EEEEcccHHHHHHHHHHhCCCeEEEEeCC
Confidence 88999999999999998778889998765
No 475
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=57.09 E-value=6.5 Score=40.32 Aligned_cols=31 Identities=19% Similarity=0.321 Sum_probs=28.4
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
..+.|||.|..|..+|..|++ |.+|.+.++.
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~ 37 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRT 37 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCC
Confidence 469999999999999999999 9999998764
No 476
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=56.53 E-value=6.4 Score=38.05 Aligned_cols=31 Identities=23% Similarity=0.359 Sum_probs=27.5
Q ss_pred cEEEECCCcchHHHHHhhhc-CC-eEEEEeeCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGG 64 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~-~VlvLE~G~ 64 (557)
-+.|||+|..|..+|..|+. +. .|.+++.-.
T Consensus 7 kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 7 KITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 58999999999999999998 76 999998754
No 477
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=56.20 E-value=7.2 Score=36.65 Aligned_cols=31 Identities=16% Similarity=0.275 Sum_probs=27.2
Q ss_pred ccEEEECCCcchHHHHHhhhc-CC-eEEEEeeC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERG 63 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~-~VlvLE~G 63 (557)
-.++|+|+|-+|..+|..|.+ |. +|.|.-|-
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt 152 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN 152 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHTTCCCEEEECSC
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 459999999999999999999 85 79998764
No 478
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=56.15 E-value=6.5 Score=38.04 Aligned_cols=30 Identities=17% Similarity=0.330 Sum_probs=26.7
Q ss_pred cEEEECCCcchHHHHHhhhc-CC--eEEEEeeC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NA--SVLLLERG 63 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~--~VlvLE~G 63 (557)
-+.|||+|..|..+|..|+. +. .+.|+|.-
T Consensus 11 kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 11 KVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 48999999999999999998 75 89999873
No 479
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=56.07 E-value=7.1 Score=34.99 Aligned_cols=30 Identities=30% Similarity=0.367 Sum_probs=26.6
Q ss_pred EEEEC-CCcchHHHHHhhh-c-CCeEEEEeeCC
Q 008675 35 YIIIG-GGTAGCPLAATLS-Q-NASVLLLERGG 64 (557)
Q Consensus 35 vIIVG-sG~aG~~~A~~La-e-g~~VlvLE~G~ 64 (557)
++|.| +|..|..+|.+|+ + |.+|.++.|..
T Consensus 8 vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 8 ITILGAAGQIAQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp EEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred EEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc
Confidence 89999 4999999999999 6 99999998853
No 480
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=56.05 E-value=7.4 Score=37.81 Aligned_cols=32 Identities=28% Similarity=0.296 Sum_probs=28.6
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
--+.|||.|..|..+|.+|+. |.+|++.++..
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 183 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTR 183 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEECCCc
Confidence 359999999999999999999 99999998753
No 481
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=55.89 E-value=6.8 Score=41.17 Aligned_cols=33 Identities=15% Similarity=0.098 Sum_probs=29.9
Q ss_pred CccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 32 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 32 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
.-.+||||.|.-|..+|..|.+ |.+|+++|.-.
T Consensus 127 ~~hviI~G~g~~g~~la~~L~~~~~~vvvid~~~ 160 (565)
T 4gx0_A 127 RGHILIFGIDPITRTLIRKLESRNHLFVVVTDNY 160 (565)
T ss_dssp CSCEEEESCCHHHHHHHHHTTTTTCCEEEEESCH
T ss_pred CCeEEEECCChHHHHHHHHHHHCCCCEEEEECCH
Confidence 4569999999999999999999 99999999764
No 482
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=55.64 E-value=6.3 Score=38.37 Aligned_cols=30 Identities=30% Similarity=0.357 Sum_probs=26.9
Q ss_pred cEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
-+.|||.|..|..+|..|++ |.+|.+.++.
T Consensus 18 ~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~ 48 (338)
T 1np3_A 18 KVAIIGYGSQGHAHACNLKDSGVDVTVGLRS 48 (338)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECCT
T ss_pred EEEEECchHHHHHHHHHHHHCcCEEEEEECC
Confidence 49999999999999999999 9999887764
No 483
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=55.63 E-value=7.7 Score=38.03 Aligned_cols=31 Identities=19% Similarity=0.350 Sum_probs=27.3
Q ss_pred EEEECCCcchHHHHHhhhc-CCeEEEEeeCCC
Q 008675 35 YIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 65 (557)
Q Consensus 35 vIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~~ 65 (557)
++|+|||.-|..+|+.+.+ |++|++++.-+.
T Consensus 4 I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 4 ICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 7899999999999998888 999999987543
No 484
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=55.52 E-value=6.7 Score=39.54 Aligned_cols=31 Identities=26% Similarity=0.230 Sum_probs=28.1
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
--++|||.|..|..+|.+|.. |.+|++.|+-
T Consensus 248 KTVgVIG~G~IGr~vA~~lrafGa~Viv~d~d 279 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGAGARVKVTEVD 279 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 458999999999999999988 9999999874
No 485
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=55.51 E-value=6.8 Score=41.57 Aligned_cols=33 Identities=21% Similarity=0.393 Sum_probs=29.2
Q ss_pred ccEEEECCCcchHHHHHhhhc-CC-eEEEEeeCCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGGS 65 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~-~VlvLE~G~~ 65 (557)
.-|+|||+|..|+.+|..|+. |. ++.|++....
T Consensus 18 s~VlVVGaGGLGsevak~La~aGVG~ItlvD~D~V 52 (640)
T 1y8q_B 18 GRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTI 52 (640)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEEECCBC
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCeEEEecCCEE
Confidence 569999999999999999999 84 8999997753
No 486
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=55.22 E-value=17 Score=36.44 Aligned_cols=32 Identities=25% Similarity=0.420 Sum_probs=28.9
Q ss_pred cEEEECCCcchHHHHHhhhc-C--CeEEEEeeCCC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-N--ASVLLLERGGS 65 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g--~~VlvLE~G~~ 65 (557)
.|||||||+||+.+|.+|++ + .+|+|||+.+.
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~ 38 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCC
Confidence 49999999999999999998 4 89999999764
No 487
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=55.15 E-value=6.5 Score=36.21 Aligned_cols=30 Identities=17% Similarity=0.304 Sum_probs=27.1
Q ss_pred cEEEECCCcchHHHHHhhhc-CC----eEEEEeeC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-NA----SVLLLERG 63 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g~----~VlvLE~G 63 (557)
-+.|||.|..|..+|..|.+ |. +|.+.++.
T Consensus 4 ~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~ 38 (247)
T 3gt0_A 4 QIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLN 38 (247)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSC
T ss_pred eEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCC
Confidence 38999999999999999999 87 99998875
No 488
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=55.11 E-value=7.9 Score=35.37 Aligned_cols=30 Identities=27% Similarity=0.472 Sum_probs=26.4
Q ss_pred EEEECC-CcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 35 YIIIGG-GTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 35 vIIVGs-G~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
++|.|+ |..|..+|.+|++ |.+|.++.|..
T Consensus 4 vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~ 35 (255)
T 2dkn_A 4 IAITGSASGIGAALKELLARAGHTVIGIDRGQ 35 (255)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred EEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCh
Confidence 788887 8899999999999 99999998753
No 489
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=55.02 E-value=7.7 Score=39.87 Aligned_cols=30 Identities=20% Similarity=0.453 Sum_probs=27.1
Q ss_pred cEEEECCCcchHHHHHhhhc-C--CeEEEEeeC
Q 008675 34 DYIIIGGGTAGCPLAATLSQ-N--ASVLLLERG 63 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae-g--~~VlvLE~G 63 (557)
.+.|||.|..|+.+|..|++ | .+|.++++.
T Consensus 11 kI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~ 43 (481)
T 2o3j_A 11 KVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMN 43 (481)
T ss_dssp EEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 59999999999999999998 4 799999864
No 490
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=54.77 E-value=8 Score=37.51 Aligned_cols=32 Identities=25% Similarity=0.238 Sum_probs=28.6
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
--+.|||.|..|..+|.+|+. |.+|++.++-.
T Consensus 156 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 188 (330)
T 2gcg_A 156 STVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQ 188 (330)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCCEEEEESSS
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 359999999999999999999 99999998753
No 491
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=54.75 E-value=6.9 Score=39.20 Aligned_cols=31 Identities=26% Similarity=0.494 Sum_probs=27.6
Q ss_pred ccEEEECCCcchHHHHHhhhc-CC-eEEEEeeC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERG 63 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~-~VlvLE~G 63 (557)
--+.|||+|..|..+|..|.. |. +|.+..+.
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~ 200 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRT 200 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCSEEEEECSS
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 359999999999999999988 97 89998775
No 492
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=54.56 E-value=7.2 Score=37.83 Aligned_cols=33 Identities=15% Similarity=0.248 Sum_probs=28.0
Q ss_pred CCccEEEECCCcchHHHHHhhhc-CC--eEEEEeeC
Q 008675 31 SYYDYIIIGGGTAGCPLAATLSQ-NA--SVLLLERG 63 (557)
Q Consensus 31 ~~~DvIIVGsG~aG~~~A~~Lae-g~--~VlvLE~G 63 (557)
..--+.|||+|..|..+|..|+. |. .|.|+|.-
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 34569999999999999999988 75 89999863
No 493
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=54.50 E-value=7.2 Score=37.61 Aligned_cols=32 Identities=25% Similarity=0.353 Sum_probs=27.9
Q ss_pred ccEEEECCCcchHHHHHhhhc-CC--eEEEEeeCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NA--SVLLLERGG 64 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~--~VlvLE~G~ 64 (557)
.-+.|||+|..|..+|..|+. +. .|.+++.-.
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 569999999999999999998 75 899998753
No 494
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=54.48 E-value=7.1 Score=39.25 Aligned_cols=31 Identities=29% Similarity=0.268 Sum_probs=28.3
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 63 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G 63 (557)
--++|||.|..|..+|.+|.. |.+|++.|+-
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~ 243 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGFGARVVVTEVD 243 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCC
Confidence 469999999999999999988 9999999874
No 495
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=54.45 E-value=7.3 Score=37.50 Aligned_cols=30 Identities=20% Similarity=0.519 Sum_probs=26.8
Q ss_pred EEEECCCcchHHHHHhhhc-CC--eEEEEeeCC
Q 008675 35 YIIIGGGTAGCPLAATLSQ-NA--SVLLLERGG 64 (557)
Q Consensus 35 vIIVGsG~aG~~~A~~Lae-g~--~VlvLE~G~ 64 (557)
+.|||+|..|..+|..|+. +. .|.++|.-.
T Consensus 3 v~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 3 VTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp EEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 7899999999999999998 75 899998854
No 496
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=54.40 E-value=9.8 Score=35.55 Aligned_cols=30 Identities=13% Similarity=0.118 Sum_probs=26.2
Q ss_pred EEEECC---CcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 35 YIIIGG---GTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 35 vIIVGs---G~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
++|.|+ |-.|..+|.+|++ |.+|+++.|..
T Consensus 9 vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~ 42 (275)
T 2pd4_A 9 GLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE 42 (275)
T ss_dssp EEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST
T ss_pred EEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCH
Confidence 888997 5789999999999 99999998754
No 497
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=53.89 E-value=8.4 Score=39.54 Aligned_cols=32 Identities=22% Similarity=0.223 Sum_probs=29.1
Q ss_pred ccEEEECCCcchHHHHHhhhc-CCeEEEEeeCC
Q 008675 33 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 64 (557)
Q Consensus 33 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvLE~G~ 64 (557)
-++-|||.|..|..+|..|++ |.+|.+.++..
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999 99999998764
No 498
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=53.85 E-value=16 Score=37.06 Aligned_cols=43 Identities=9% Similarity=-0.096 Sum_probs=30.2
Q ss_pred cCCceEeeccCCCCCCCCChHHHHHHHHHHHHHHHHHhhhhccCC
Q 008675 512 VDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSERLASNDS 556 (557)
Q Consensus 512 ~~nL~V~DaSv~P~~~~~np~lTi~ala~r~a~~i~~~~~~~~~~ 556 (557)
+.|||.++.+..|..++. +--.+.=++|+|+.|++...+++|.
T Consensus 422 ~~~l~fAG~~t~~~~~g~--v~GA~~SG~~aA~~i~~~l~~~~~~ 464 (472)
T 1b37_A 422 VGRVYFTGEHTSEHYNGY--VHGAYLSGIDSAEILINCAQKKMCK 464 (472)
T ss_dssp BTTEEECSGGGCTTTTTS--HHHHHHHHHHHHHHHHHHHHHCCC-
T ss_pred CCcEEEeecccCCCCCCc--hhHHHHHHHHHHHHHHHHHHhCcCC
Confidence 469999999998853332 3334445789999998887777664
No 499
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=53.83 E-value=8.1 Score=37.97 Aligned_cols=27 Identities=30% Similarity=0.480 Sum_probs=23.3
Q ss_pred cEEEECCCcch-----HHHHHhhhc-CCeEEEE
Q 008675 34 DYIIIGGGTAG-----CPLAATLSQ-NASVLLL 60 (557)
Q Consensus 34 DvIIVGsG~aG-----~~~A~~Lae-g~~VlvL 60 (557)
-++|.|||++| +++|.+|.+ |.+|+.+
T Consensus 4 ~i~i~~GGTgGHi~palala~~L~~~g~~V~~v 36 (365)
T 3s2u_A 4 NVLIMAGGTGGHVFPALACAREFQARGYAVHWL 36 (365)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred cEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEE
Confidence 38999999997 578888988 9999887
No 500
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=53.74 E-value=6.6 Score=37.53 Aligned_cols=29 Identities=24% Similarity=0.297 Sum_probs=26.2
Q ss_pred cEEEECCCcchHHHHHhhhc------C-CeEEEEee
Q 008675 34 DYIIIGGGTAGCPLAATLSQ------N-ASVLLLER 62 (557)
Q Consensus 34 DvIIVGsG~aG~~~A~~Lae------g-~~VlvLE~ 62 (557)
.+.|||+|..|..+|..|++ | .+|.++.+
T Consensus 10 ~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 10 KIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 59999999999999999986 5 79999987
Done!