BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008679
(557 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3VTA|A Chain A, Crystal Structure Of Cucumisin, A Subtilisin-Like
Endoprotease From Cucumis Melo L
pdb|3VTA|B Chain B, Crystal Structure Of Cucumisin, A Subtilisin-Like
Endoprotease From Cucumis Melo L
Length = 621
Score = 335 bits (860), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 210/567 (37%), Positives = 312/567 (55%), Gaps = 53/567 (9%)
Query: 2 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCF 61
+GHGTHTAST AG V A+ +G GTA GG PLAR+A YK CW + C
Sbjct: 92 NGHGTHTASTAAGGLVSQANLYG-LGLGTARGGVPLARIAAYKVCW---------NDGCS 141
Query: 62 EADMLAAIDDAIRDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPA 121
+ D+LAA DDAI DGV ++S+S+G P + D IAIG+ +AV+ IL + SAGN GP
Sbjct: 142 DTDILAAYDDAIADGVDIISLSVGGANPRHYFVDAIAIGSFHAVERGILTSNSAGNGGPN 201
Query: 122 PSSLSNLAPWLITVGAGSLDRDFVGPVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVP 181
+ ++L+PWL++V A ++DR FV V +G G G ++ ++ + +PLV D+
Sbjct: 202 FFTTASLSPWLLSVAASTMDRKFVTQVQIGNGQSFQGVSINTFD-NQYYPLVSGRDIPNT 260
Query: 182 GVHQNETNQCLPGSLTPEKVKGKIVLCMRGSG-FKLSKGMEVKRAGGVGLILGNSPANGN 240
G ++ + C S+ P +KGKIV+C G + K ++ G G+++ +N
Sbjct: 261 GFDKSTSRFCTDKSVNPNLLKGKIVVCEASFGPHEFFKSLD----GAAGVLM---TSNTR 313
Query: 241 EYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPN 300
+Y+ D++ LP++ + +D + YI S +P A I ++ T+L+ AP + +F+SRGPN
Sbjct: 314 DYA-DSYPLPSSVLDPNDLLATLRYIYSIRSPGATIFKSTTILNAS-APVVVSFSSRGPN 371
Query: 301 ALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVXXXXXXX 360
++KPDI+ PG+ ILAAW + + +R + I SGTSMSCPH+
Sbjct: 372 RATKDVIKPDISGPGVEILAAWPSVAPVGGI---RRNTLFNIISGTSMSCPHITGIATYV 428
Query: 361 XXIHPDWSSAAIRSALMTTAWMKNNKALPITNADGSIATPFSFGSGHFRPTKAADPGLVY 420
+P WS AAI+SALMTTA N + P F++GSGH P KA PGLVY
Sbjct: 429 KTYNPTWSPAAIKSALMTTASPMNARFNP--------QAEFAYGSGHVNPLKAVRPGLVY 480
Query: 421 DASYEDYLLYLCSHGFSFTNPVFRCPNKPPSAL--------NLNYPSIAI---PNLNGTV 469
DA+ DY+ +LC G++ T V R + +LNYPS + P+
Sbjct: 481 DANESDYVKFLCGQGYN-TQAVRRITGDYSACTSGNTGRVWDLNYPSFGLSVSPSQTFNQ 539
Query: 470 IVKRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRLGSETTRQG 529
RT+T+V S Y P G+++ NP++L F+ +G +KSFT+TVR G
Sbjct: 540 YFNRTLTSVAPQASTYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVR--------G 591
Query: 530 LTKQYVF-GWYRWTDGLHLVRSPMAVS 555
K +V W+DG+H VRSP+ ++
Sbjct: 592 SIKGFVVSASLVWSDGVHYVRSPITIT 618
>pdb|3I6S|A Chain A, Crystal Structure Of The Plant Subtilisin-Like Protease
Sbt3
pdb|3I6S|B Chain B, Crystal Structure Of The Plant Subtilisin-Like Protease
Sbt3
pdb|3I74|A Chain A, Crystal Structure Of The Plant Subtilisin-Like Protease
Sbt3 In Complex With A Chloromethylketone Inhibitor
pdb|3I74|B Chain B, Crystal Structure Of The Plant Subtilisin-Like Protease
Sbt3 In Complex With A Chloromethylketone Inhibitor
Length = 649
Score = 271 bits (694), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 201/576 (34%), Positives = 293/576 (50%), Gaps = 55/576 (9%)
Query: 2 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCF 61
DGHGTH AS AG S FG +A GTA G AP ARLA+YK + F
Sbjct: 101 DGHGTHCASITAGNFAKGVSHFG-YAPGTARGVAPRARLAVYKFSF---------NEGTF 150
Query: 62 EADMLAAIDDAIRDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPA 121
+D++AA+D A+ DGV ++SIS G + D I+I + A+ +LV+ SAGN GP
Sbjct: 151 TSDLIAAMDQAVADGVDMISISYGY-RFIPLYEDAISIASFGAMMKGVLVSASAGNRGPG 209
Query: 122 PSSLSNLAPWLITVGAGSLDRDFVGPVVLGTGMEIIGKTVTPYN-LKKMHPLVYAADVVV 180
SL+N +PW++ V +G DR F G + LG G++I G ++ P + P++Y
Sbjct: 210 IGSLNNGSPWILCVASGHTDRTFAGTLTLGNGLKIRGWSLFPARAFVRDSPVIYNKT--- 266
Query: 181 PGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGN 240
+ + + L PE IV+C F + + + + P
Sbjct: 267 --LSDCSSEELLSQVENPENT---IVICDDNGDFSDQMRIITRARLKAAIFISEDPGVFR 321
Query: 241 EYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPN 300
++ P V + ++ Y+K++ PTA I T L T+PAP +A ++RGP+
Sbjct: 322 SATFPN---PGVVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPVVAASSARGPS 378
Query: 301 ALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRI-VKYTIFSGTSMSCPHVXXXXXX 359
I KPDI APG+ ILAA+ + + + + Y + SGTSM+ PH
Sbjct: 379 RSYLGISKPDILAPGVLILAAYPPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAM 438
Query: 360 XXXIHPDWSSAAIRSALMTTAWMKNNKALPITNADGS-IATPFSFGSGHFRPTKAADPGL 418
HP+WS +AIRSA+MTTA +N PI ++D + ATP G+GH P +A DPGL
Sbjct: 439 LKAAHPEWSPSAIRSAMMTTADPLDNTRKPIKDSDNNKAATPLDMGAGHVDPNRALDPGL 498
Query: 419 VYDASYEDYLLYLCSHGFSFTNPVFR----------CPNKPPSALNLNYPS-IAIPNLNG 467
VYDA+ +DY+ LCS +FT F+ C N PSA +LNYPS IA+ ++ G
Sbjct: 499 VYDATPQDYVNLLCS--LNFTEEQFKTIARSSASHNCSN--PSA-DLNYPSFIALYSIEG 553
Query: 468 TVIV-----KRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVR-L 521
+ KRTVTNVG + Y K P ++ +P IL F + +K+S+T+T+R +
Sbjct: 554 NFTLLEQKFKRTVTNVGKGAATYKAKLKAPKNSTISVSPQILVFKNKNEKQSYTLTIRYI 613
Query: 522 GSETTRQGLTKQYVFGWYRWTD--GLHLVRSPMAVS 555
G E + + G W + G H VRSP+ S
Sbjct: 614 GDEGQSRNV------GSITWVEQNGNHSVRSPIVTS 643
>pdb|3AFG|A Chain A, Crystal Structure Of Pron-Tk-Sp From Thermococcus
Kodakaraensis
pdb|3AFG|B Chain B, Crystal Structure Of Pron-Tk-Sp From Thermococcus
Kodakaraensis
Length = 539
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 16/124 (12%)
Query: 291 MANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSC 350
+ +F+SRGP A + LKP++ APG I+AA + +S + D YT GT+M+
Sbjct: 309 ITDFSSRGPTADNR--LKPEVVAPGNWIIAARASGTSMGQPINDY----YTAAPGTAMAT 362
Query: 351 PHVXXXXXXXXXIHPDWSSAAIRSALMTTAWMKNNKALPITNADGSIATPFSFGSGHFRP 410
PHV HP W+ +++AL+ TA + P AD ++G+G
Sbjct: 363 PHVAGIAALLLQAHPSWTPDKVKTALIETA----DIVKPDEIAD------IAYGAGRVNA 412
Query: 411 TKAA 414
KAA
Sbjct: 413 YKAA 416
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 23/142 (16%)
Query: 2 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCF 61
+GHGTH AS AG G + G G AP A+L K + +G+
Sbjct: 178 NGHGTHVASIAAGT--------GAASNGKYKGMAPGAKLVGIKVL-----NGQGSGSI-- 222
Query: 62 EADMLAAIDDAIRD----GVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGN 117
+D++ +D A+++ G+ V+++S+G++Q + D ++ NA ++V +AGN
Sbjct: 223 -SDIINGVDWAVQNKDKYGIKVINLSLGSSQS-SDGTDSLSQAVNNAWDAGLVVVVAAGN 280
Query: 118 SGPAPSSLSN--LAPWLITVGA 137
SGP ++ + A +ITVGA
Sbjct: 281 SGPNKYTVGSPAAASKVITVGA 302
>pdb|3EIF|A Chain A, 1.9 Angstrom Crystal Structure Of The Active Form Of The
C5a Peptidase From Streptococcus Pyogenes (Scpa)
Length = 936
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 69/154 (44%), Gaps = 20/154 (12%)
Query: 201 VKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNEYSY-DAHYLPATAVLYDDA 259
VKGKI L RG K K+AG VG+++ ++ G + +PA + D
Sbjct: 288 VKGKIALIERGDIDFKDKIANAKKAGAVGVLIYDNQDKGFPIELPNVDQMPAAFISRKDG 347
Query: 260 IKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDITAPGLNIL 319
+ + + K T A K VL T ++ F+S G A D I KPDI APG +IL
Sbjct: 348 LLLKDNSKKTITFNATPK----VLPTASDTKLSRFSSWGLTA-DGNI-KPDIAAPGQDIL 401
Query: 320 AAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHV 353
++ + KY SGTSMS P V
Sbjct: 402 SSVANN-------------KYAKLSGTSMSAPLV 422
>pdb|2SNI|E Chain E, Structural Comparison Of Two Serine Proteinase-Protein
Inhibitor Complexes. Eglin-C-Subtilisin Carlsberg And
Ci-2- Subtilisin Novo
Length = 275
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 21/88 (23%)
Query: 292 ANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCP 351
A+F+S GP + D+ APG++I +++ P KY ++GTSM+ P
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSI-----QSTLPGN--------KYGAYNGTSMASP 225
Query: 352 HVXXXXXXXXXIHPDWSSAAIRSALMTT 379
HV HP+W++ +RS+L T
Sbjct: 226 HVAGAAALILSKHPNWTNTQVRSSLQNT 253
>pdb|2SBT|A Chain A, A Comparison Of The Three-Dimensional Structures Of
Subtilisin Bpn And Subtilisin Novo
pdb|1SBT|A Chain A, Atomic Coordinates For Subtilisin Bpn (Or Novo)
Length = 275
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 21/88 (23%)
Query: 292 ANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCP 351
A+F+S GP + D+ APG++I +++ P KY ++GTSM+ P
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSI-----QSTLPGN--------KYGAYNGTSMASP 225
Query: 352 HVXXXXXXXXXIHPDWSSAAIRSALMTT 379
HV HP+W++ +RS+L T
Sbjct: 226 HVAGAAALILSKHPNWTNTQVRSSLQNT 253
>pdb|2SIC|E Chain E, Refined Crystal Structure Of The Complex Of Subtilisin
Bpn' And Streptomyces Subtilisin Inhibitor At 1.8
Angstroms Resolution
pdb|1SIB|E Chain E, Refined Crystal Structures Of Subtilisin Novo In Complex
With Wild-Type And Two Mutant Eglins. Comparison With
Other Serine Proteinase Inhibitor Complexes
pdb|1SBN|E Chain E, Refined Crystal Structures Of Subtilisin Novo In Complex
With Wild-Type And Two Mutant Eglins. Comparison With
Other Serine Proteinase Inhibitor Complexes
pdb|3SIC|E Chain E, Molecular Recognition At The Active Site Of Subtilisin
Bpn': Crystallographic Studies Using Genetically
Engineered Proteinaceous Inhibitor Ssi (Streptomyces
Subtilisin Inhibitor)
pdb|5SIC|E Chain E, Molecular Recognition At The Active Site Of Subtilisin
Bpn': Crystallographic Studies Using Genetically
Engineered Proteinaceous Inhibitor Ssi (Streptomyces
Subtilisin Inhibitor)
pdb|1SUP|A Chain A, Subtilisin Bpn' At 1.6 Angstroms Resolution: Analysis Of
Discrete Disorder And Comparison Of Crystal Forms
pdb|2ST1|A Chain A, The Three-dimensional Structure Of Bacillus
Amyloliquefaciens Subtilisin At 1.8 Angstroms And An
Analysis Of The Structural Consequences Of Peroxide
Inactivation
Length = 275
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 21/88 (23%)
Query: 292 ANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCP 351
A+F+S GP + D+ APG++I +++ P KY ++GTSM+ P
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSI-----QSTLPGN--------KYGAYNGTSMASP 225
Query: 352 HVXXXXXXXXXIHPDWSSAAIRSALMTT 379
HV HP+W++ +RS+L T
Sbjct: 226 HVAGAAALILSKHPNWTNTQVRSSLENT 253
>pdb|1S02|A Chain A, Effects Of Engineered Salt Bridges On The Stability Of
Subtilisin Bpn'
Length = 275
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 21/88 (23%)
Query: 292 ANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCP 351
A+F+S GP + D+ APG++I +++ P KY ++GTSM+ P
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSI-----QSTLPGN--------KYGAYNGTSMASP 225
Query: 352 HVXXXXXXXXXIHPDWSSAAIRSALMTT 379
HV HP+W++ +RS+L T
Sbjct: 226 HVAGAAALILSKHPNWTNTQVRSSLENT 253
>pdb|1YJB|A Chain A, Subtilisin Bpn' 8397+1 (E.C. 3.4.21.14) (Mutant With Met
50 Replaced By Phe, Asn 76 Replaced By Asp, Gly 169
Replaced By Ala, Gln 206 Replaced By Cys, Asn 218
Replaced By Ser And Lys 256 Replaced By Tyr) (M50f,
N76d, G169a, Q206c, N218s, And K256y) In 35%
Dimethylformamide
pdb|1YJA|A Chain A, Subtilisin Bpn' 8397+1 (E.C. 3.4.21.14) (Mutant With Met
50 Replaced By Phe, Asn 76 Replaced By Asp, Gly 169
Replaced By Ala, Gln 206 Replaced By Cys, Asn 218
Replaced By Ser And Lys 256 Replaced By Tyr) (M50f,
N76d, G169a, Q206c, N218s, And K256y) In 20%
Dimethylformamide
pdb|1SBH|A Chain A, Subtilisin Bpn' 8397+1 (E.C. 3.4.21.14) Mutant (M50f,
N76d, G169a, Q206c, N218s, K256y)
pdb|1YJC|A Chain A, Subtilisin Bpn' 8397+1 (e.c. 3.4.21.14) (mutant With Met
50 Replaced By Phe, Asn 76 Replaced By Asp, Gly 169
Replaced By Ala, Gln 206 Replaced By Cys, Asn 218
Replaced By Ser And Lys 256 Replaced By Tyr) (m50f,
N76d, G169a, Q206c, N218s, And K256y) In 50%
Dimethylformamide
Length = 275
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 21/88 (23%)
Query: 292 ANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCP 351
A+F+S GP + D+ APG++I + P KY +SGTSM+ P
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSIXSTL-----PGN--------KYGAYSGTSMASP 225
Query: 352 HVXXXXXXXXXIHPDWSSAAIRSALMTT 379
HV HP+W++ +RS+L T
Sbjct: 226 HVAGAAALILSKHPNWTNTQVRSSLENT 253
>pdb|1LW6|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 At 1.5 Angstrom Resolution
pdb|1TM1|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2
pdb|1TM3|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59k Mutant
pdb|1TM4|E Chain E, Crystal Structure Of The Complex Of Subtilsin Bpn'with
Chymotrypsin Inhibitor 2 M59g Mutant
pdb|1TM5|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59a Mutant
pdb|1TM7|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59y Mutant
pdb|1TMG|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59f Mutant
pdb|1TO1|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 Y61a Mutant
pdb|1TO2|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59k, In Ph 9 Cryosoak
pdb|1Y1K|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 T58a Mutant
pdb|1Y33|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 T58p Mutant
pdb|1Y34|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 E60a Mutant
pdb|1Y3B|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 E60s Mutant
pdb|1Y3C|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 R62a Mutant
pdb|1Y3D|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 R67a Mutant
pdb|1Y3F|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 F69a Mutant
pdb|1Y48|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 R65a Mutant
pdb|1Y4A|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59r/e60s Mutant
pdb|1Y4D|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59rE60S MUTANT
Length = 281
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 21/88 (23%)
Query: 292 ANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCP 351
A+F+S GP + D+ APG++I +++ P KY ++GTSM+ P
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSI-----QSTLPGN--------KYGAYNGTSMASP 225
Query: 352 HVXXXXXXXXXIHPDWSSAAIRSALMTT 379
HV HP+W++ +RS+L T
Sbjct: 226 HVAGAAALILSKHPNWTNTQVRSSLENT 253
>pdb|1SBI|A Chain A, Subtilisin Bpn' 8397 (E.C. 3.4.21.14) Mutant (M50f, N76d,
G169a, Q206c, N218s)
Length = 275
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 21/88 (23%)
Query: 292 ANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCP 351
A+F+S GP + D+ APG++I + P KY +SGTSM+ P
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSIXSTL-----PGN--------KYGAYSGTSMASP 225
Query: 352 HVXXXXXXXXXIHPDWSSAAIRSALMTT 379
HV HP+W++ +RS+L T
Sbjct: 226 HVAGAAALILSKHPNWTNTQVRSSLENT 253
>pdb|1SUB|A Chain A, Calcium-Independent Subtilisin By Design
Length = 275
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 21/88 (23%)
Query: 292 ANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCP 351
A+F+S GP + D+ APG++I +++ P KY +SGT M+ P
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSI-----QSTLPGN--------KYGAYSGTXMASP 225
Query: 352 HVXXXXXXXXXIHPDWSSAAIRSALMTT 379
HV HP+W++ +RS+L T
Sbjct: 226 HVAGAAALILSKHPNWTNTQVRSSLENT 253
>pdb|1A2Q|A Chain A, Subtilisin Bpn' Mutant 7186
Length = 275
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 21/88 (23%)
Query: 292 ANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCP 351
A+F+S GP + D+ APG++I +++ P KY +SGT M+ P
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSI-----QSTLPGN--------KYGAYSGTXMASP 225
Query: 352 HVXXXXXXXXXIHPDWSSAAIRSALMTT 379
HV HP+W++ +RS+L T
Sbjct: 226 HVAGAAALILSKHPNWTNTQVRSSLENT 253
>pdb|3F49|S Chain S, Anion-Triggered Engineered Subtilisin Subt_bacam
Length = 266
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 21/89 (23%)
Query: 292 ANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCP 351
A F+S GP + D+ APG++I + KY SGTSM+ P
Sbjct: 178 APFSSVGP--------ELDVMAPGVSICSTLPGG-------------KYGALSGTSMASP 216
Query: 352 HVXXXXXXXXXIHPDWSSAAIRSALMTTA 380
HV HP+W++ +RS+L TA
Sbjct: 217 HVAGAAALILSKHPNWTNTQVRSSLENTA 245
>pdb|1AK9|A Chain A, Subtilisin Mutant 8321
Length = 275
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 21/88 (23%)
Query: 292 ANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCP 351
A+F+S GP + D+ APG++I +++ P KY SGTSM+ P
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSI-----QSTLPGN--------KYGAKSGTSMASP 225
Query: 352 HVXXXXXXXXXIHPDWSSAAIRSALMTT 379
HV HP+W++ +RS+L T
Sbjct: 226 HVAGAAALILSKHPNWTNTQVRSSLENT 253
>pdb|1UBN|A Chain A, Selenosubtilisin Bpn
Length = 275
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 21/88 (23%)
Query: 292 ANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCP 351
A+F+S GP + D+ APG++I +++ P KY ++GT M+ P
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSI-----QSTLPGN--------KYGAYNGTXMASP 225
Query: 352 HVXXXXXXXXXIHPDWSSAAIRSALMTT 379
HV HP+W++ +RS+L T
Sbjct: 226 HVAGAAALILSKHPNWTNTQVRSSLENT 253
>pdb|1V5I|A Chain A, Crystal Structure Of Serine Protease Inhibitor Poia1 In
Complex With Subtilisin Bpn'
Length = 275
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 21/88 (23%)
Query: 292 ANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCP 351
A+F+S GP + D+ APG++I +++ P KY ++GT M+ P
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSI-----QSTLPGN--------KYGAYNGTXMASP 225
Query: 352 HVXXXXXXXXXIHPDWSSAAIRSALMTT 379
HV HP+W++ +RS+L T
Sbjct: 226 HVAGAAALILSKHPNWTNTQVRSSLENT 253
>pdb|1S01|A Chain A, Large Increases In General Stability For Subtilisin
Bpn(Prime) Through Incremental Changes In The Free
Energy Of Unfolding
Length = 275
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 21/88 (23%)
Query: 292 ANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCP 351
A+F+S GP + D+ APG++I + P KY SGTSM+ P
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSICSTL-----PGN--------KYGAKSGTSMASP 225
Query: 352 HVXXXXXXXXXIHPDWSSAAIRSALMTT 379
HV HP+W++ +RS+L T
Sbjct: 226 HVAGAAALILSKHPNWTNTQVRSSLENT 253
>pdb|3CNQ|S Chain S, Prosubtilisin Substrate Complex Of Subtilisin Subt_bacam
pdb|3BGO|S Chain S, Azide Complex Of Engineered Subtilisin Subt_bacam
pdb|3CO0|S Chain S, Substrate Complex Of Fluoride-Sensitive Engineered
Subtilisin Subt_bacam
Length = 266
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 21/87 (24%)
Query: 294 FTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHV 353
F+S GP + D+ APG++I + KY SGT+M+ PHV
Sbjct: 180 FSSVGP--------ELDVMAPGVSICSTLPGG-------------KYGALSGTAMASPHV 218
Query: 354 XXXXXXXXXIHPDWSSAAIRSALMTTA 380
HP+W++ +RS+L TA
Sbjct: 219 AGAAALILSKHPNWTNTQVRSSLENTA 245
>pdb|1SUE|A Chain A, Subtilisin Bpn' From Bacillus Amyloliquefaciens, Mutant
Length = 266
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 21/88 (23%)
Query: 292 ANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCP 351
A+F+S GP + D+ APG++I + P KY SGTSM+ P
Sbjct: 178 ASFSSVGP--------ELDVMAPGVSICSTL-----PGN--------KYGAKSGTSMASP 216
Query: 352 HVXXXXXXXXXIHPDWSSAAIRSALMTT 379
HV HP+W++ +RS+L T
Sbjct: 217 HVAGAAALILSKHPNWTNTQVRSSLENT 244
>pdb|1DUI|A Chain A, Subtilisin Bpn' From Bacillus Amyloliquefaciens, Crystal
Growth Mutant
Length = 266
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 21/88 (23%)
Query: 292 ANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCP 351
A+F+S GP + D+ APG++I + P KY SGTSM+ P
Sbjct: 178 ASFSSVGP--------ELDVMAPGVSICSTL-----PGN--------KYGAKSGTSMASP 216
Query: 352 HVXXXXXXXXXIHPDWSSAAIRSALMTT 379
HV HP+W++ +RS+L T
Sbjct: 217 HVAGAAALILSKHPNWTNTQVRSSLENT 244
>pdb|1AQN|A Chain A, Subtilisin Mutant 8324
pdb|1AU9|A Chain A, Subtilisin Bpn' Mutant 8324 In Citrate
Length = 275
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 21/88 (23%)
Query: 292 ANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCP 351
A+F+S GP + D+ APG++I + P KY SGTSM+ P
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSICSTL-----PGN--------KYGAKSGTSMASP 225
Query: 352 HVXXXXXXXXXIHPDWSSAAIRSALMTT 379
HV HP+W++ +RS+L T
Sbjct: 226 HVAGAAALILSKHPNWTNTQVRSSLENT 253
>pdb|1SPB|S Chain S, Subtilisin Bpn' Prosegment (77 Residues) Complexed With A
Mutant Subtilisin Bpn' (266 Residues). Crystal Ph 4.6.
Crystallization Temperature 20 C Diffraction
Temperature- 160 C
Length = 266
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 21/88 (23%)
Query: 292 ANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCP 351
A+F+S GP + D+ APG++I+ S L +K Y SGT+M+ P
Sbjct: 178 ASFSSVGP--------ELDVMAPGVSIV---------STLPGNK----YGAKSGTAMASP 216
Query: 352 HVXXXXXXXXXIHPDWSSAAIRSALMTT 379
HV HP+W++ +RS+L T
Sbjct: 217 HVAGAAALILSKHPNWTNTQVRSSLENT 244
>pdb|1SUA|A Chain A, Subtilisin Bpn'
Length = 266
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 21/88 (23%)
Query: 292 ANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCP 351
A+F+S GP + D+ APG++I+ S L +K Y SGT+M+ P
Sbjct: 178 ASFSSVGP--------ELDVMAPGVSIV---------STLPGNK----YGAKSGTAMASP 216
Query: 352 HVXXXXXXXXXIHPDWSSAAIRSALMTT 379
HV HP+W++ +RS+L T
Sbjct: 217 HVAGAAALILSKHPNWTNTQVRSSLENT 244
>pdb|1SUC|A Chain A, Calcium-Independent Subtilisin By Design
pdb|1SUD|A Chain A, Calcium-Independent Subtilisin By Design
Length = 275
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 21/88 (23%)
Query: 292 ANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCP 351
A+F+S GP + D+ APG++I +++ P KY SGT M+ P
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSI-----QSTLPGN--------KYGAKSGTXMASP 225
Query: 352 HVXXXXXXXXXIHPDWSSAAIRSALMTT 379
HV HP+W++ +RS+L T
Sbjct: 226 HVAGAAALILSKHPNWTNTQVRSSLENT 253
>pdb|1ST2|A Chain A, The Three-Dimensional Structure Of Bacillus
Amyloliquefaciens Subtilisin At 1.8 Angstroms And An
Analysis Of The Structural Consequences Of Peroxide
Inactivation
Length = 275
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 21/88 (23%)
Query: 292 ANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCP 351
A+F+S GP + D+ APG++I +++ P KY ++GTS + P
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSI-----QSTLPGN--------KYGAYNGTSXASP 225
Query: 352 HVXXXXXXXXXIHPDWSSAAIRSALMTT 379
HV HP+W++ +RS+L T
Sbjct: 226 HVAGAAALILSKHPNWTNTQVRSSLENT 253
>pdb|1GNS|A Chain A, Subtilisin Bpn'
Length = 263
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 21/88 (23%)
Query: 292 ANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCP 351
A+F+S GP + D+ APG++I WS + P KY SGT M+ P
Sbjct: 175 ASFSSVGP--------ELDVMAPGVSI---WS--TLPGN--------KYGAKSGTXMASP 213
Query: 352 HVXXXXXXXXXIHPDWSSAAIRSALMTT 379
HV HP+W++ +RS+L T
Sbjct: 214 HVAGAAALILSKHPNWTNTQVRSSLENT 241
>pdb|1GNV|A Chain A, Calcium Independent Subtilisin Bpn' Mutant
Length = 266
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 21/88 (23%)
Query: 292 ANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCP 351
A+F+S GP + D+ APG++I + P KY SGT M+ P
Sbjct: 178 ASFSSVGP--------ELDVMAPGVSICSTL-----PGN--------KYGAKSGTXMASP 216
Query: 352 HVXXXXXXXXXIHPDWSSAAIRSALMTT 379
HV HP+W++ +RS+L T
Sbjct: 217 HVAGAAALILSKHPNWTNTQVRSSLENT 244
>pdb|1AH2|A Chain A, Serine Protease Pb92 From Bacillus Alcalophilus, Nmr, 18
Structures
Length = 269
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 13/71 (18%)
Query: 310 DITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVXXXXXXXXXIHPDWSS 369
DI APG+N+ + + ++ Y +GTSM+ PHV +P WS+
Sbjct: 191 DIVAPGVNVQSTYPGST-------------YASLNGTSMATPHVAGAAALVKQKNPSWSN 237
Query: 370 AAIRSALMTTA 380
IR+ L TA
Sbjct: 238 VQIRNHLKNTA 248
Score = 28.5 bits (62), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 72/170 (42%), Gaps = 25/170 (14%)
Query: 2 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCF 61
+GHGTH A T+A ++ G G AP A L K A+ S ++
Sbjct: 60 NGHGTHVAGTIAALN----NSIGVL------GVAPNAELYAVKVLGASGSGSVSS----- 104
Query: 62 EADMLAAIDDAIRDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPA 121
+ ++ A +G+HV ++S+G+ P A + +A +LV ++GNSG
Sbjct: 105 ---IAQGLEWAGNNGMHVANLSLGSPSPSATLEQAVN----SATSRGVLVVAASGNSGAG 157
Query: 122 PSSLSNLAPWLITVGAGSLDRDFVGPVVLGTGMEIIGKTVTPYNLKKMHP 171
S + VGA + + G G++I+ V N++ +P
Sbjct: 158 SISYPARYANAMAVGATDQNNNRASFSQYGAGLDIVAPGV---NVQSTYP 204
>pdb|1NDU|A Chain A, Bacillus Lentus Subtilisin Variant S101gV104N
Length = 269
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 13/71 (18%)
Query: 310 DITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVXXXXXXXXXIHPDWSS 369
DI APG+N+ + + ++ Y +GTSM+ PHV +P WS+
Sbjct: 191 DIVAPGVNVQSTYPGST-------------YASLNGTSMATPHVAGAAALVKQKNPSWSN 237
Query: 370 AAIRSALMTTA 380
IR+ L TA
Sbjct: 238 VQIRNHLKNTA 248
Score = 28.5 bits (62), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 72/170 (42%), Gaps = 25/170 (14%)
Query: 2 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCF 61
+GHGTH A T+A ++ G G AP A L K A+ S ++
Sbjct: 60 NGHGTHVAGTIAALN----NSIGVL------GVAPNAELYAVKVLGASGGGSNSS----- 104
Query: 62 EADMLAAIDDAIRDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPA 121
+ ++ A +G+HV ++S+G+ P A + +A +LV ++GNSG
Sbjct: 105 ---IAQGLEWAGNNGMHVANLSLGSPSPSATLEQAVN----SATSRGVLVVAASGNSGAG 157
Query: 122 PSSLSNLAPWLITVGAGSLDRDFVGPVVLGTGMEIIGKTVTPYNLKKMHP 171
S + VGA + + G G++I+ V N++ +P
Sbjct: 158 SISYPARYANAMAVGATDQNNNRASFSQYGAGLDIVAPGV---NVQSTYP 204
>pdb|1C9J|A Chain A, Bacillus Lentus Subtilisin K27rN87SV104YN123ST274A Variant
Length = 269
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 13/71 (18%)
Query: 310 DITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVXXXXXXXXXIHPDWSS 369
DI APG+N+ + + ++ Y +GTSM+ PHV +P WS+
Sbjct: 191 DIVAPGVNVQSTYPGST-------------YASLNGTSMATPHVAGAAALVKQKNPSWSN 237
Query: 370 AAIRSALMTTA 380
IR+ L TA
Sbjct: 238 VQIRNHLKNTA 248
>pdb|1ST3|A Chain A, The Crystal Structure Of The Bacillus Lentus Alkaline
Protease, Subtilisin Bl, At 1.4 Angstroms Resolution
Length = 269
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 13/71 (18%)
Query: 310 DITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVXXXXXXXXXIHPDWSS 369
DI APG+N+ + + ++ Y +GTSM+ PHV +P WS+
Sbjct: 191 DIVAPGVNVQSTYPGST-------------YASLNGTSMATPHVAGAAALVKQKNPSWSN 237
Query: 370 AAIRSALMTTA 380
IR+ L TA
Sbjct: 238 VQIRNHLKNTA 248
Score = 32.0 bits (71), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 25/170 (14%)
Query: 2 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCF 61
+GHGTH A T+A ++ G G AP A L K A + + ++
Sbjct: 60 NGHGTHVAGTIAALN----NSIGVL------GVAPSAELYAVKVLGADGRGAISS----- 104
Query: 62 EADMLAAIDDAIRDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPA 121
+ ++ A +G+HV ++S+G+ P A + +A +LV ++GNSG +
Sbjct: 105 ---IAQGLEWAGNNGMHVANLSLGSPSPSATLEQAVN----SATSRGVLVVAASGNSGAS 157
Query: 122 PSSLSNLAPWLITVGAGSLDRDFVGPVVLGTGMEIIGKTVTPYNLKKMHP 171
S + VGA + + G G++I+ V N++ +P
Sbjct: 158 SISYPARYANAMAVGATDQNNNRASFSQYGAGLDIVAPGV---NVQSTYP 204
>pdb|1WSD|A Chain A, Alkaline M-Protease Form I Crystal Strcuture
pdb|1MPT|A Chain A, Crystal Structure Of A New Alkaline Serine Protease
(M-Protease) From Bacillus Sp. Ksm-K16
Length = 269
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 13/71 (18%)
Query: 310 DITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVXXXXXXXXXIHPDWSS 369
DI APG+N+ + + ++ Y +GTSM+ PHV +P WS+
Sbjct: 191 DIVAPGVNVQSTYPGST-------------YASLNGTSMATPHVAGVAALVKQKNPSWSN 237
Query: 370 AAIRSALMTTA 380
IR+ L TA
Sbjct: 238 VQIRNHLKNTA 248
Score = 28.9 bits (63), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 72/170 (42%), Gaps = 25/170 (14%)
Query: 2 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCF 61
+GHGTH A T+A ++ G G AP A L K A+ S ++
Sbjct: 60 NGHGTHVAGTIAALN----NSIGVL------GVAPSAELYAVKVLGASGSGSVSS----- 104
Query: 62 EADMLAAIDDAIRDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPA 121
+ ++ A +G+HV ++S+G+ P A + +A +LV ++GNSG
Sbjct: 105 ---IAQGLEWAGNNGMHVANLSLGSPSPSATLEQAVN----SATSRGVLVVAASGNSGAG 157
Query: 122 PSSLSNLAPWLITVGAGSLDRDFVGPVVLGTGMEIIGKTVTPYNLKKMHP 171
S + VGA + + G G++I+ V N++ +P
Sbjct: 158 SISYPARYANAMAVGATDQNNNRASFSQYGAGLDIVAPGV---NVQSTYP 204
>pdb|1NDQ|A Chain A, Bacillus Lentus Subtilisin
pdb|1TK2|A Chain A, Crystal Structure Of The Complex Formed Between Alkaline
Proteinase Savinase And Gramicidin S At 1.5a Resolution
pdb|1JEA|A Chain A, Altered Topology And Flexibility In Engineered Subtilisin
pdb|1SVN|A Chain A, Savinase
pdb|3BX1|A Chain A, Complex Between The Barley Alpha-AmylaseSUBTILISIN
Inhibitor And The Subtilisin Savinase
pdb|3BX1|B Chain B, Complex Between The Barley Alpha-AmylaseSUBTILISIN
Inhibitor And The Subtilisin Savinase
pdb|1GCI|A Chain A, The 0.78 Angstroms Structure Of A Serine Protease-Bacillus
Lentus Subtilisin
Length = 269
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 13/71 (18%)
Query: 310 DITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVXXXXXXXXXIHPDWSS 369
DI APG+N+ + + ++ Y +GTSM+ PHV +P WS+
Sbjct: 191 DIVAPGVNVQSTYPGST-------------YASLNGTSMATPHVAGAAALVKQKNPSWSN 237
Query: 370 AAIRSALMTTA 380
IR+ L TA
Sbjct: 238 VQIRNHLKNTA 248
Score = 28.9 bits (63), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 72/170 (42%), Gaps = 25/170 (14%)
Query: 2 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCF 61
+GHGTH A T+A ++ G G AP A L K A+ S ++
Sbjct: 60 NGHGTHVAGTIAALN----NSIGVL------GVAPSAELYAVKVLGASGSGSVSS----- 104
Query: 62 EADMLAAIDDAIRDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPA 121
+ ++ A +G+HV ++S+G+ P A + +A +LV ++GNSG
Sbjct: 105 ---IAQGLEWAGNNGMHVANLSLGSPSPSATLEQAVN----SATSRGVLVVAASGNSGAG 157
Query: 122 PSSLSNLAPWLITVGAGSLDRDFVGPVVLGTGMEIIGKTVTPYNLKKMHP 171
S + VGA + + G G++I+ V N++ +P
Sbjct: 158 SISYPARYANAMAVGATDQNNNRASFSQYGAGLDIVAPGV---NVQSTYP 204
>pdb|1MEE|A Chain A, The Complex Between The Subtilisin From A Mesophilic
Bacterium And The Leech Inhibitor Eglin-C
Length = 275
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 13/71 (18%)
Query: 310 DITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVXXXXXXXXXIHPDWSS 369
D+ APG++I +++ P Y ++GTSM+ PHV HP W++
Sbjct: 197 DVMAPGVSI-----QSTLPGG--------TYGAYNGTSMATPHVAGAAALILSKHPTWTN 243
Query: 370 AAIRSALMTTA 380
A +R L +TA
Sbjct: 244 AQVRDRLESTA 254
>pdb|2GKO|A Chain A, S41 Psychrophilic Protease
Length = 309
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 49/117 (41%), Gaps = 17/117 (14%)
Query: 291 MANFTSRG--PNALDPYILKPD--ITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGT 346
+A+F+SRG A D I K D I+APG + + W FD Y SGT
Sbjct: 202 VADFSSRGHKRTAGDYVIQKGDVEISAPGAAVYSTW----------FDG---GYATISGT 248
Query: 347 SMSCPHVXXXXXXXXXIHPDWSSAAIRSALMTTAWMKNNKALPITNADGSIATPFSF 403
SM+ PH P S+ +R L T A + + + + IA+ F F
Sbjct: 249 SMASPHAAGLAAKIWAQSPAASNVDVRGELQTRASVNDILSGNSAGSGDDIASGFGF 305
>pdb|1V6C|A Chain A, Crystal Structure Of Psychrophilic Subtilisin-like
Protease Apa1 From Antarctic Psychrotroph
Pseudoalteromonas Sp. As-11
pdb|1V6C|B Chain B, Crystal Structure Of Psychrophilic Subtilisin-like
Protease Apa1 From Antarctic Psychrotroph
Pseudoalteromonas Sp. As-11
pdb|1WVM|A Chain A, Crystal Structure Of Psychrophilic Subtilisin-Like Serine
Protease Apa1 From Antarctic Psychrotroph
Pseudoaleromonas Sp. As-11, Complexed With Inhibitor
Chymostatin
pdb|1WVM|B Chain B, Crystal Structure Of Psychrophilic Subtilisin-Like Serine
Protease Apa1 From Antarctic Psychrotroph
Pseudoaleromonas Sp. As-11, Complexed With Inhibitor
Chymostatin
pdb|1Y9Z|A Chain A, Crystal Structure Of Psychrophilic Subtilisin-like Serine
Protease From Antarctic Psychrotroph Pseudoalteromonas
Sp. As-11 At 0.14 Nm Resolution
pdb|1Y9Z|B Chain B, Crystal Structure Of Psychrophilic Subtilisin-like Serine
Protease From Antarctic Psychrotroph Pseudoalteromonas
Sp. As-11 At 0.14 Nm Resolution
Length = 441
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 299 PNALDPYIL--KPDITAPGLNILAAWSEASS----PSKLAFDKRIVKYTIFSGTSMSCPH 352
P +P+++ DIT P +++ A A S ++ Y ++GTSM+ PH
Sbjct: 315 PGLQNPFLVDANSDITVPSVSVDRATGLALKAKLGQSTTVSNQGNQDYEYYNGTSMATPH 374
Query: 353 VXXXXXXXXXIHPDWSSAAIRSALMTTA 380
V HP+ S++ +R+AL TA
Sbjct: 375 VSGVATLVWSYHPECSASQVRAALNATA 402
>pdb|1WMD|A Chain A, Crystal Structure Of Alkaline Serine Protease Kp-43 From
Bacillus Sp. Ksm-Kp43 (1.30 Angstrom, 100 K)
pdb|1WME|A Chain A, Crystal Structure Of Alkaline Serine Protease Kp-43 From
Bacillus Sp. Ksm-kp43 (1.50 Angstrom, 293 K)
Length = 434
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 291 MANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSC 350
+A F+SRGP D I KPD+ APG IL+A S +P + KY GTSM+
Sbjct: 202 VAQFSSRGPTK-DGRI-KPDVMAPGTFILSARSSL-APDSSFWANHDSKYAYMGGTSMAT 258
Query: 351 PHV 353
P V
Sbjct: 259 PIV 261
>pdb|1IAV|A Chain A, Structure On Native (Asn 87) Subtilisin From Bacillus
Lentus
Length = 269
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 310 DITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVXXXXXXXXXIHPDWSS 369
DI APG+N+ + + ++ Y +GT M+ PHV +P WS+
Sbjct: 191 DIVAPGVNVQSTYPGST-------------YASLNGTXMATPHVAGAAALVKQKNPSWSN 237
Query: 370 AAIRSALMTTA 380
IR+ L TA
Sbjct: 238 VQIRNHLKNTA 248
Score = 28.9 bits (63), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 72/170 (42%), Gaps = 25/170 (14%)
Query: 2 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCF 61
+GHGTH A T+A ++ G G AP A L K A+ S ++
Sbjct: 60 NGHGTHVAGTIAALN----NSIGVL------GVAPNAELYAVKVLGASGSGSVSS----- 104
Query: 62 EADMLAAIDDAIRDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPA 121
+ ++ A +G+HV ++S+G+ P A + +A +LV ++GNSG
Sbjct: 105 ---IAQGLEWAGNNGMHVANLSLGSPSPSATLEQAVN----SATSRGVLVVAASGNSGAG 157
Query: 122 PSSLSNLAPWLITVGAGSLDRDFVGPVVLGTGMEIIGKTVTPYNLKKMHP 171
S + VGA + + G G++I+ V N++ +P
Sbjct: 158 SISYPARYANAMAVGATDQNNNRASFSQYGAGLDIVAPGV---NVQSTYP 204
>pdb|1C9N|A Chain A, Bacillus Lentus Substilisin Variant (Ser 87)
K27rV104YN123ST274A
Length = 269
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 310 DITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVXXXXXXXXXIHPDWSS 369
DI APG+N+ + + ++ Y +GT M+ PHV +P WS+
Sbjct: 191 DIVAPGVNVQSTYPGST-------------YASLNGTXMATPHVAGAAALVKQKNPSWSN 237
Query: 370 AAIRSALMTTA 380
IR+ L TA
Sbjct: 238 VQIRNHLKNTA 248
>pdb|1Q5P|A Chain A, S156e/s166d Variant Of Bacillus Lentus Subtilisin
Length = 269
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 310 DITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVXXXXXXXXXIHPDWSS 369
DI APG+N+ + + ++ Y +GT M+ PHV +P WS+
Sbjct: 191 DIVAPGVNVQSTYPGST-------------YASLNGTXMATPHVAGAAALVKQKNPSWSN 237
Query: 370 AAIRSALMTTA 380
IR+ L TA
Sbjct: 238 VQIRNHLKNTA 248
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 74/174 (42%), Gaps = 33/174 (18%)
Query: 2 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCF 61
+GHGTH A T+A + N+ G AP A L K A+ + ++
Sbjct: 60 NGHGTHVAGTIA--ALDNSIGVLGV--------APSAELYAVKVLGASGSGAISS----- 104
Query: 62 EADMLAAIDDAIRDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPA 121
+ ++ A +G+HV ++S+G+ P A + +A +LV ++GN G
Sbjct: 105 ---IAQGLEWAGNNGMHVANLSLGSPSPSATLEQAVN----SATSRGVLVVAASGNEGAG 157
Query: 122 ----PSSLSNLAPWLITVGAGSLDRDFVGPVVLGTGMEIIGKTVTPYNLKKMHP 171
P+ +N + VGA + + G G++I+ V N++ +P
Sbjct: 158 SIDYPARYAN----AMAVGATDQNNNRASFSQYGAGLDIVAPGV---NVQSTYP 204
>pdb|2IXT|A Chain A, Sphericase
pdb|2IXT|B Chain B, Sphericase
pdb|3D43|A Chain A, The Crystal Structure Of Sph At 0.8a
pdb|3D43|B Chain B, The Crystal Structure Of Sph At 0.8a
Length = 310
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 46/113 (40%), Gaps = 17/113 (15%)
Query: 272 PTAIIKQARTVLHTQPAPFMANFTSRG--PNALDPYILKPDI--TAPGLNILAAWSEASS 327
P AI A + +A+++SRG A D I + DI +APG ++ + W
Sbjct: 184 PNAIAVAALENVQQNGTYRVADYSSRGYISTAGDYVIQEGDIEISAPGSSVYSTWYNGG- 242
Query: 328 PSKLAFDKRIVKYTIFSGTSMSCPHVXXXXXXXXXIHPDWSSAAIRSALMTTA 380
Y SGTSM+ PHV +P S+ +RS L A
Sbjct: 243 ------------YNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERA 283
Score = 28.9 bits (63), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 56/129 (43%), Gaps = 25/129 (19%)
Query: 2 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCF 61
+GHGTH A T A A GG + G AP A L YK + + +
Sbjct: 69 NGHGTHVAGT--------ALADGGSDQAGIYGVAPDADLWAYKVLLDS--------GSGY 112
Query: 62 EADMLAAI----DDAIRDGVH-VLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAG 116
D+ AAI D A G ++S+S+G+ + N I+ A +L+ +AG
Sbjct: 113 SDDIAAAIRHAADQATATGTKTIISMSLGS----SANNSLISSAVNYAYSKGVLIVAAAG 168
Query: 117 NSGPAPSSL 125
NSG + ++
Sbjct: 169 NSGYSQGTI 177
>pdb|1C9M|A Chain A, Bacillus Lentus Subtilsin (Ser 87) N76dS103AV104I
Length = 269
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 310 DITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVXXXXXXXXXIHPDWSS 369
DI APG+N+ + + ++ Y +GT M+ PHV +P WS+
Sbjct: 191 DIVAPGVNVQSTYPGST-------------YASLNGTXMATPHVAGAAALVKQKNPSWSN 237
Query: 370 AAIRSALMTTA 380
IR+ L TA
Sbjct: 238 VQIRNHLKNTA 248
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 72/170 (42%), Gaps = 25/170 (14%)
Query: 2 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCF 61
+GHGTH A T+A + N+ G A P A L K A+ + ++
Sbjct: 60 NGHGTHVAGTIA--ALDNSIGVLGVA--------PSAELYAVKVLGASGSGAISS----- 104
Query: 62 EADMLAAIDDAIRDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPA 121
+ ++ A +G+HV ++S+G+ P A + +A +LV ++GNSG
Sbjct: 105 ---IAQGLEWAGNNGMHVANLSLGSPSPSATLEQAVN----SATSRGVLVVAASGNSGAG 157
Query: 122 PSSLSNLAPWLITVGAGSLDRDFVGPVVLGTGMEIIGKTVTPYNLKKMHP 171
S + VGA + + G G++I+ V N++ +P
Sbjct: 158 SISYPARYANAMAVGATDQNNNRASFSQYGAGLDIVAPGV---NVQSTYP 204
>pdb|4DWW|A Chain A, Crystal Structure Of Nattokinase From Bacillus Subtilis
Natto
Length = 275
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 13/71 (18%)
Query: 310 DITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVXXXXXXXXXIHPDWSS 369
D+ APG++I +++ P Y ++GT M+ PHV HP W++
Sbjct: 197 DVMAPGVSI-----QSTLPGG--------TYGAYNGTXMATPHVAGAAALILSKHPTWTN 243
Query: 370 AAIRSALMTTA 380
A +R L +TA
Sbjct: 244 AQVRDRLESTA 254
>pdb|1SCJ|A Chain A, Crystal Structure Of Subtilisin-Propeptide Complex
Length = 275
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 13/71 (18%)
Query: 310 DITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVXXXXXXXXXIHPDWSS 369
D+ APG++I +++ P Y ++GT M+ PHV HP W++
Sbjct: 197 DVMAPGVSI-----QSTLPGG--------TYGAYNGTCMATPHVAGAAALILSKHPTWTN 243
Query: 370 AAIRSALMTTA 380
A +R L +TA
Sbjct: 244 AQVRDRLESTA 254
>pdb|1EA7|A Chain A, Sphericase
Length = 310
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 45/113 (39%), Gaps = 17/113 (15%)
Query: 272 PTAIIKQARTVLHTQPAPFMANFTSRG--PNALDPYILKPDI--TAPGLNILAAWSEASS 327
P AI A + +A+++SRG A D I + DI +APG ++ + W
Sbjct: 184 PNAIAVAALENVQQNGTYRVADYSSRGYISTAGDYVIQEGDIEISAPGSSVYSTWYNGG- 242
Query: 328 PSKLAFDKRIVKYTIFSGTSMSCPHVXXXXXXXXXIHPDWSSAAIRSALMTTA 380
Y SGT M+ PHV +P S+ +RS L A
Sbjct: 243 ------------YNTISGTXMATPHVSGLAAKIWAENPSLSNTQLRSNLQERA 283
Score = 28.9 bits (63), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 56/129 (43%), Gaps = 25/129 (19%)
Query: 2 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCF 61
+GHGTH A T A A GG + G AP A L YK + + +
Sbjct: 69 NGHGTHVAGT--------ALADGGSDQAGIYGVAPDADLWAYKVLLDS--------GSGY 112
Query: 62 EADMLAAI----DDAIRDGVH-VLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAG 116
D+ AAI D A G ++S+S+G+ + N I+ A +L+ +AG
Sbjct: 113 SDDIAAAIRHAADQATATGTKTIISMSLGS----SANNSLISSAVNYAYSKGVLIVAAAG 168
Query: 117 NSGPAPSSL 125
NSG + ++
Sbjct: 169 NSGYSQGTI 177
>pdb|1SCN|E Chain E, Inactivation Of Subtilisin Carlsberg By
N-(Tert-Butoxycarbonyl-Alanyl-
Prolyl-Phenylalanyl)-O-Benzol Hydroxylamine: Formation
Of Covalent Enzyme-Inhibitor Linkage In The Form Of A
Carbamate Derivative
Length = 276
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 340 YTIFSGTSMSCPHVXXXXXXXXXIHPDWSSAAIRSALMTTA 380
Y +GTSM+ PHV HP+ S++ +R+ L +TA
Sbjct: 213 YATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTA 253
>pdb|3QTL|A Chain A, Structural Basis For Dual-Inhibition Mechanism Of A
Non-Classical Kazal-Type Serine Protease Inhibitor From
Horseshoe Crab In Complex With Subtilisin
pdb|3QTL|B Chain B, Structural Basis For Dual-Inhibition Mechanism Of A
Non-Classical Kazal-Type Serine Protease Inhibitor From
Horseshoe Crab In Complex With Subtilisin
pdb|3QTL|C Chain C, Structural Basis For Dual-Inhibition Mechanism Of A
Non-Classical Kazal-Type Serine Protease Inhibitor From
Horseshoe Crab In Complex With Subtilisin
pdb|4HX2|A Chain A, Crystal Structure Of Streptomyces Caespitosus Sermetstatin
In Complex With Bacillus Licheniformis Subtilisin
pdb|4HX2|C Chain C, Crystal Structure Of Streptomyces Caespitosus Sermetstatin
In Complex With Bacillus Licheniformis Subtilisin
Length = 274
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 340 YTIFSGTSMSCPHVXXXXXXXXXIHPDWSSAAIRSALMTTA 380
Y +GTSM+ PHV HP+ S++ +R+ L +TA
Sbjct: 213 YATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTA 253
>pdb|1CSE|E Chain E, The High-Resolution X-Ray Crystal Structure Of The Complex
Formed Between Subtilisin Carlsberg And Eglin C, An
Elastase Inhibitor From The Leech Hirudo Medicinalis.
Structural Analysis, Subtilisin Structure And Interface
Geometry
pdb|2SEC|E Chain E, Structural Comparison Of Two Serine Proteinase-Protein
Inhibitor Complexes. Eglin-C-Subtilisin Carlsberg And
Ci-2- Subtilisin Novo
pdb|1OYV|A Chain A, Crystal Structure Of Tomato Inhibitor-Ii In A Ternary
Complex With Subtilisin Carlsberg
pdb|1OYV|B Chain B, Crystal Structure Of Tomato Inhibitor-Ii In A Ternary
Complex With Subtilisin Carlsberg
pdb|1R0R|E Chain E, 1.1 Angstrom Resolution Structure Of The Complex Between
The Protein Inhibitor, Omtky3, And The Serine Protease,
Subtilisin Carlsberg
pdb|1AF4|A Chain A, Crystal Structure Of Subtilisin Carlsberg In Anhydrous
Dioxane
pdb|1BE6|A Chain A, Trans-Cinnamoyl-Subtilisin In Anhydrous Acetonitrile
pdb|1BE8|A Chain A, Trans-Cinnamoyl-Subtilisin In Water
pdb|1BFK|A Chain A, Crystal Structure Of Subtilisin Carlsberg In 40%
Acetonitrile
pdb|1BFU|A Chain A, Subtilisin Carlsberg In 20% Dioxane
pdb|1SBC|A Chain A, The Refined Crystal Structure Of Subtilisin Carlsberg At
2.5 Angstroms Resolution
pdb|1SCA|A Chain A, Enzyme Crystal Structure In A Neat Organic Solvent
pdb|1SCB|A Chain A, Enzyme Crystal Structure In A Neat Organic Solvent
pdb|1SCD|A Chain A, X-Ray Crystal Structure Of Cross-Linked Subtilism
Carlsberg In Water Vs. Acetonitrile
pdb|2WUV|A Chain A, Crystallographic Analysis Of Counter-Ion Effects On
Subtilisin Enzymatic Action In Acetonitrile
pdb|2WUW|E Chain E, Crystallographic Analysis Of Counter-Ion Effects On
Subtilisin Enzymatic Action In Acetonitrile (Native
Data)
Length = 274
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 340 YTIFSGTSMSCPHVXXXXXXXXXIHPDWSSAAIRSALMTTA 380
Y +GTSM+ PHV HP+ S++ +R+ L +TA
Sbjct: 213 YATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTA 253
>pdb|1YU6|A Chain A, Crystal Structure Of The Subtilisin Carlsberg:omtky3
Complex
pdb|1YU6|B Chain B, Crystal Structure Of The Subtilisin Carlsberg:omtky3
Complex
Length = 275
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 340 YTIFSGTSMSCPHVXXXXXXXXXIHPDWSSAAIRSALMTTA 380
Y +GTSM+ PHV HP+ S++ +R+ L +TA
Sbjct: 214 YATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTA 254
>pdb|4GI3|A Chain A, Crystal Structure Of Greglin In Complex With Subtilisin
Length = 275
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 340 YTIFSGTSMSCPHVXXXXXXXXXIHPDWSSAAIRSALMTTA 380
Y +GTSM+ PHV HP+ S++ +R+ L +TA
Sbjct: 214 YATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTA 254
>pdb|1C3L|A Chain A, Subtilisin-Carlsberg Complexed With Xenon (8 Bar)
pdb|3UNX|A Chain A, Bond Length Analysis Of Asp, Glu And His Residues In
Subtilisin Carlsberg At 1.26a Resolution
Length = 274
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 340 YTIFSGTSMSCPHVXXXXXXXXXIHPDWSSAAIRSALMTTA 380
Y +GTSM+ PHV HP+ S++ +R+ L +TA
Sbjct: 213 YATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTA 253
>pdb|1WMF|A Chain A, Crystal Structure Of Alkaline Serine Protease Kp-43 From
Bacillus Sp. Ksm-kp43 (oxidized Form, 1.73 Angstrom)
Length = 434
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 291 MANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSC 350
+A F+SRGP D I KPD+ APG IL+A S +P + KY GTS +
Sbjct: 202 VAQFSSRGPTK-DGRI-KPDVMAPGTFILSARSSL-APDSSFWANHDSKYAYXGGTSXAT 258
Query: 351 PHV 353
P V
Sbjct: 259 PIV 261
>pdb|1BH6|A Chain A, Subtilisin Dy In Complex With The Synthetic Inhibitor N-
Benzyloxycarbonyl-Ala-Pro-Phe-Chloromethyl Ketone
Length = 274
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 13/71 (18%)
Query: 310 DITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVXXXXXXXXXIHPDWSS 369
++ APG+++ + + PS YT +GTSM+ PHV +P S+
Sbjct: 196 EVMAPGVSVYSTY-----PSN--------TYTSLNGTSMASPHVAGAAALILSKYPTLSA 242
Query: 370 AAIRSALMTTA 380
+ +R+ L +TA
Sbjct: 243 SQVRNRLSSTA 253
>pdb|1SEL|A Chain A, Crystal Structure Of Selenosubtilisin At 2.0-Angstroms
Resolution
pdb|1SEL|B Chain B, Crystal Structure Of Selenosubtilisin At 2.0-Angstroms
Resolution
pdb|1AV7|A Chain A, Subtilisin Carlsberg L-Naphthyl-1-Acetamido Boronic Acid
Inhibitor Complex
pdb|1AVT|A Chain A, Subtilisin Carlsberg D-Para-Chlorophenyl-1-Acetamido
Boronic Acid Inhibitor Complex
pdb|1VSB|A Chain A, Subtilisin Carlsberg L-Para-Chlorophenyl-1-Acetamido
Boronic Acid Inhibitor Complex
pdb|3VSB|A Chain A, Subtilisin Carlsberg D-Naphthyl-1-Acetamido Boronic Acid
Inhibitor Complex
Length = 274
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 340 YTIFSGTSMSCPHVXXXXXXXXXIHPDWSSAAIRSALMTTA 380
Y +GT M+ PHV HP+ S++ +R+ L +TA
Sbjct: 213 YATLNGTXMASPHVAGAAALILSKHPNLSASQVRNRLSSTA 253
>pdb|2B6N|A Chain A, The 1.8 A Crystal Structure Of A Proteinase K Like Enzyme
From A Psychrotroph Serratia Species
Length = 278
Score = 32.0 bits (71), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 11/71 (15%)
Query: 310 DITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVXXXXXXXXXIHPDWSS 369
DI APG +I ++W ++S + SGTSM+ PHV +P+ S
Sbjct: 198 DIYAPGSSITSSWYTSNSATN-----------TISGTSMASPHVAGVAALYLDENPNLSP 246
Query: 370 AAIRSALMTTA 380
A + + L T A
Sbjct: 247 AQVTNLLKTRA 257
>pdb|3VOT|A Chain A, Crystal Structure Of L-Amino Acid Ligase From Bacillus
Licheniformis
pdb|3VOT|B Chain B, Crystal Structure Of L-Amino Acid Ligase From Bacillus
Licheniformis
Length = 425
Score = 32.0 bits (71), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 25/160 (15%)
Query: 72 AIRDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNIL---------VACSAGNSGPAP 122
+I+ VHVLSI N F +G+ I + L V+ + GPA
Sbjct: 212 SIQGNVHVLSIGYKGNSKGPFFEEGVYIAPAQLKEETRLAIVKEVTGAVSALGIHQGPAH 271
Query: 123 SSLSNLAPWLITVGAGSLDRDFVGPVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPG 182
+ L LD+D P V+ G I G V+ Y +K+ + + V+
Sbjct: 272 TEL-------------RLDKDGT-PYVIEVGARIGGSGVSHYIVKESTGINFMQLVLQNA 317
Query: 183 VHQNETNQCLPGSLTPEKVKGKIVLCMRGSG-FKLSKGME 221
+ E+++ G + P + G ++ ++GSG F+ G+E
Sbjct: 318 LKPLESSE-FEGEIRPVRTAGNYIIPVQGSGTFEKIDGLE 356
>pdb|3ZXX|A Chain A, Structure Of Self-cleaved Protease Domain Of Pata
Length = 307
Score = 32.0 bits (71), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 58/138 (42%), Gaps = 20/138 (14%)
Query: 1 MDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTC 60
M HGTH AS + G+ E + G AP R I P S
Sbjct: 67 MSAHGTHVASIIFGQ-----------PETSVPGIAPQCRGLI------VPIFSDDR-RRI 108
Query: 61 FEADMLAAIDDAIRDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKH-NILVACSAGNSG 119
+ D+ I+ A+ G H+++IS G F DG A++ + N+L+ +AGN+G
Sbjct: 109 TQLDLARGIERAVNAGAHIINISGGELTDFG-EADGWLENAVSLCRQNNVLLVAAAGNNG 167
Query: 120 PAPSSLSNLAPWLITVGA 137
+ P ++ VGA
Sbjct: 168 CDCLHVPAALPAVLAVGA 185
>pdb|4H6V|A Chain A, Structure Of Patellamide Maturation Protease Pata
Length = 306
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 58/138 (42%), Gaps = 20/138 (14%)
Query: 1 MDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTC 60
M HGTH AS + G+ E + G AP R I P S
Sbjct: 58 MSAHGTHVASIIFGQ-----------PETSVPGIAPQCRGLI------VPIFSDDR-RRI 99
Query: 61 FEADMLAAIDDAIRDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKH-NILVACSAGNSG 119
+ D+ I+ A+ G H+++IS G F DG A++ + N+L+ +AGN+G
Sbjct: 100 TQLDLARGIERAVNAGAHIINISGGELTDFG-EADGWLENAVSLCRQNNVLLVAAAGNNG 158
Query: 120 PAPSSLSNLAPWLITVGA 137
+ P ++ VGA
Sbjct: 159 CDCLHVPAALPAVLAVGA 176
>pdb|3ZXY|A Chain A, Structure Of S218a Mutant Of The Protease Domain Of Pata
Length = 282
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 58/138 (42%), Gaps = 20/138 (14%)
Query: 1 MDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTC 60
M HGTH AS + G+ E + G AP R I P S
Sbjct: 48 MSAHGTHVASIIFGQ-----------PETSVPGIAPQCRGLI------VPIFSDDR-RRI 89
Query: 61 FEADMLAAIDDAIRDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKH-NILVACSAGNSG 119
+ D+ I+ A+ G H+++IS G F DG A++ + N+L+ +AGN+G
Sbjct: 90 TQLDLARGIERAVNAGAHIINISGGELTDFG-EADGWLENAVSLCRQNNVLLVAAAGNNG 148
Query: 120 PAPSSLSNLAPWLITVGA 137
+ P ++ VGA
Sbjct: 149 CDCLHVPAALPAVLAVGA 166
>pdb|4DZT|A Chain A, Aqualysin I: The Crystal Structure Of A Serine Protease
From An Extreme Thermophile, Thermus Aquaticus Yt-1
Length = 276
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 19/107 (17%)
Query: 274 AIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAF 333
A + +A TV T + A+F++ G D+ APG +I +AW + + ++
Sbjct: 168 ARVAEALTVGATTSSDARASFSNYGSCV--------DLFAPGASIPSAWYTSDTATQ--- 216
Query: 334 DKRIVKYTIFSGTSMSCPHVXXXXXXXXXIHPDWSSAAIRSALMTTA 380
+GTSM+ PHV +P + A++ SA++ A
Sbjct: 217 --------TLNGTSMATPHVAGVAALYLEQNPSATPASVASAILNGA 255
>pdb|1XF1|A Chain A, Structure Of C5a Peptidase- A Key Virulence Factor From
Streptococcus
pdb|1XF1|B Chain B, Structure Of C5a Peptidase- A Key Virulence Factor From
Streptococcus
Length = 926
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 68/156 (43%), Gaps = 24/156 (15%)
Query: 201 VKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNEYSY-DAHYLPATAVLYDDA 259
VKGKI L RG K + K+AG VG+++ ++ G + PA + D
Sbjct: 279 VKGKIALIERGDIDFKDKIAKAKKAGAVGVLIYDNQDKGFPIELPNVDQXPAAFISRKDG 338
Query: 260 IKIHEYIKSTNNPTAIIKQART--VLHTQPAPFMANFTSRGPNALDPYILKPDITAPGLN 317
+ + +NP I T VL T ++ F+S G A D I KPDI APG +
Sbjct: 339 LLLK------DNPQKTITFNATPKVLPTASGTKLSRFSSWGLTA-DGNI-KPDIAAPGQD 390
Query: 318 ILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHV 353
IL++ + KY SGTS S P V
Sbjct: 391 ILSSVANN-------------KYAKLSGTSXSAPLV 413
>pdb|2E1P|A Chain A, Crystal Structure Of Pro-Tk-Subtilisin
Length = 398
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 23/63 (36%)
Query: 291 MANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSC 350
+A+F++R +P+++APG++IL+ + + S Y GT+M+
Sbjct: 291 IASFSNR----------QPEVSAPGVDILSTYPDDS-------------YETLMGTAMAT 327
Query: 351 PHV 353
PHV
Sbjct: 328 PHV 330
>pdb|1AK2|A Chain A, Adenylate Kinase Isoenzyme-2
pdb|2AK2|A Chain A, Adenylate Kinase Isoenzyme-2
Length = 233
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 243 SYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNAL 302
SY + P + DD I I+ +++ +K HTQ P + ++ RG ++
Sbjct: 152 SYHEEFNPPKEPMKDD-ITGEPLIRRSDDNKKALKIRLEAYHTQTTPLVEYYSKRGIHSA 210
Query: 303 DPYILKPDITAPGLNILAAWSEASS 327
PD+ +ILAA+S+A+S
Sbjct: 211 IDASQTPDVVF--ASILAAFSKATS 233
>pdb|3VHQ|A Chain A, Crystal Structure Of The Ca6 Site Mutant Of
Pro-Sa-Subtilisin
Length = 398
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 23/63 (36%)
Query: 291 MANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSC 350
+A+F++R +P+++APG++IL+ + + S Y GT+M+
Sbjct: 291 IASFSNR----------QPEVSAPGVDILSTYPDDS-------------YETLMGTAMAT 327
Query: 351 PHV 353
PHV
Sbjct: 328 PHV 330
>pdb|2ZWP|A Chain A, Crystal Structure Of Ca3 Site Mutant Of Pro-S324a
pdb|2ZWP|B Chain B, Crystal Structure Of Ca3 Site Mutant Of Pro-S324a
Length = 398
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 23/63 (36%)
Query: 291 MANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSC 350
+A+F++R +P+++APG++IL+ + + S Y GT+M+
Sbjct: 291 IASFSNR----------QPEVSAPGVDILSTYPDDS-------------YETLMGTAMAT 327
Query: 351 PHV 353
PHV
Sbjct: 328 PHV 330
>pdb|2ZWO|A Chain A, Crystal Structure Of Ca2 Site Mutant Of Pro-S324a
pdb|2ZWO|B Chain B, Crystal Structure Of Ca2 Site Mutant Of Pro-S324a
pdb|2ZWO|C Chain C, Crystal Structure Of Ca2 Site Mutant Of Pro-S324a
Length = 398
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 23/63 (36%)
Query: 291 MANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSC 350
+A+F++R +P+++APG++IL+ + + S Y GT+M+
Sbjct: 291 IASFSNR----------QPEVSAPGVDILSTYPDDS-------------YETLMGTAMAT 327
Query: 351 PHV 353
PHV
Sbjct: 328 PHV 330
>pdb|2Z2Z|A Chain A, Crystal Structure Of Unautoprocessed Form Of Tk-subtilisin
Soaked By 10mm Cacl2
Length = 395
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 23/63 (36%)
Query: 291 MANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSC 350
+A+F++R +P+++APG++IL+ + + S Y GT+M+
Sbjct: 288 IASFSNR----------QPEVSAPGVDILSTYPDDS-------------YETLMGTAMAT 324
Query: 351 PHV 353
PHV
Sbjct: 325 PHV 327
>pdb|2Z56|A Chain A, Crystal Structure Of G56s-Propeptide:s324a-Subtilisin
Complex
pdb|2Z57|A Chain A, Crystal Structure Of G56e-Propeptide:s324a-Subtilisin
Complex
pdb|2Z58|A Chain A, Crystal Structure Of G56w-Propeptide:s324a-Subtilisin
Complex
Length = 318
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 23/63 (36%)
Query: 291 MANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSC 350
+A+F++R +P+++APG++IL+ + + S Y GT+M+
Sbjct: 211 IASFSNR----------QPEVSAPGVDILSTYPDDS-------------YETLMGTAMAT 247
Query: 351 PHV 353
PHV
Sbjct: 248 PHV 250
>pdb|2Z30|A Chain A, Crystal Structure Of Complex Form Between
Mat-Tk-Subtilisin And Tk- Propeptide
Length = 320
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 23/63 (36%)
Query: 291 MANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSC 350
+A+F++R +P+++APG++IL+ + + S Y GT+M+
Sbjct: 213 IASFSNR----------QPEVSAPGVDILSTYPDDS-------------YETLMGTAMAT 249
Query: 351 PHV 353
PHV
Sbjct: 250 PHV 252
>pdb|3LPD|A Chain A, Crystal Structure Of A Subtilisin-Like Protease
Length = 339
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 11/62 (17%)
Query: 295 TSRGPNA-LDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVK--YTIFSGTSMSCP 351
TSRG A Y + D+ APG +IL+ + +R V Y+ +GTSM+ P
Sbjct: 229 TSRGIRASFSNYGVDVDLAAPGQDILSTVDSGT--------RRPVSDAYSFMAGTSMATP 280
Query: 352 HV 353
HV
Sbjct: 281 HV 282
>pdb|3LPC|A Chain A, Crystal Structure Of A Subtilisin-Like Protease
Length = 340
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 11/62 (17%)
Query: 295 TSRGPNA-LDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVK--YTIFSGTSMSCP 351
TSRG A Y + D+ APG +IL+ + +R V Y+ +GTSM+ P
Sbjct: 229 TSRGIRASFSNYGVDVDLAAPGQDILSTVDSGT--------RRPVSDAYSFMAGTSMATP 280
Query: 352 HV 353
HV
Sbjct: 281 HV 282
>pdb|3LPA|A Chain A, Crystal Structure Of A Subtilisin-Like Protease
Length = 340
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 11/62 (17%)
Query: 295 TSRGPNA-LDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVK--YTIFSGTSMSCP 351
TSRG A Y + D+ APG +IL+ + +R V Y+ +GTSM+ P
Sbjct: 229 TSRGIRASFSNYGVDVDLAAPGQDILSTVDSGT--------RRPVSDAYSFMAGTSMATP 280
Query: 352 HV 353
HV
Sbjct: 281 HV 282
>pdb|2ZRQ|A Chain A, Crystal Structure Of S324a-Subtilisin
pdb|3A3N|A Chain A, Crystal Structure Of Complex Between Sa-Subtilisin And Tk-
Propeptide With Deletion Of The Two C-Terminal Residues
pdb|3A3O|A Chain A, Crystal Structure Of Complex Between Sa-Subtilisin And Tk-
Propeptide With Deletion Of The Five C-Terminal Residues
Length = 329
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 23/63 (36%)
Query: 291 MANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSC 350
+A+F++R +P+++APG++IL+ + + S Y GT+M+
Sbjct: 222 IASFSNR----------QPEVSAPGVDILSTYPDDS-------------YETLMGTAMAT 258
Query: 351 PHV 353
PHV
Sbjct: 259 PHV 261
>pdb|3A3P|A Chain A, Crystal Structure Of Complex Between E201aSA-Subtilisin
And Tk-Propeptide
Length = 329
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 23/63 (36%)
Query: 291 MANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSC 350
+A+F++R +P+++APG++IL+ + + S Y GT+M+
Sbjct: 222 IASFSNR----------QPEVSAPGVDILSTYPDDS-------------YETLMGTAMAT 258
Query: 351 PHV 353
PHV
Sbjct: 259 PHV 261
>pdb|2WV7|A Chain A, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WV7|B Chain B, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WV7|C Chain C, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WV7|D Chain D, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WV7|E Chain E, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WV7|F Chain F, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WWT|A Chain A, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WWT|B Chain B, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WWT|C Chain C, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WWT|D Chain D, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WWT|E Chain E, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WWT|F Chain F, Intracellular Subtilisin Precursor From B. Clausii
Length = 329
Score = 28.9 bits (63), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 59/155 (38%), Gaps = 41/155 (26%)
Query: 2 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCF 61
+GHGTH A TVA + G AP A L I KA +G+
Sbjct: 84 NGHGTHVAGTVAAAETGSGVV----------GVAPKADLFIIKAL---------SGDGSG 124
Query: 62 EADMLAAIDDAIR----------DGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILV 111
E +A AIR + + ++++S+G D + AV +N+ V
Sbjct: 125 EMGWIAK---AIRYAVDWRGPKGEQMRIITMSLGGPTDSEELHDAVKY----AVSNNVSV 177
Query: 112 ACSAGNSGPAPSSLSNLA-----PWLITVGAGSLD 141
C+AGN G + A +I VGA D
Sbjct: 178 VCAAGNEGDGREDTNEFAYPAAYNEVIAVGAVDFD 212
>pdb|2AIF|A Chain A, Crystal Structure Of High Mobility Like Protein, Nhp2,
Putative From Cryptosporidium Parvum
Length = 135
Score = 28.5 bits (62), Expect = 9.4, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 33/74 (44%)
Query: 51 KASKAAGNTCFEADMLAAIDDAIRDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNIL 110
+A+KA E +LAA + + +H+ + N P+ F R +A+G V ++
Sbjct: 48 EATKALNRGIAEIVLLAADAEPLEILLHLPLVCEDKNTPYVFVRSKVALGRACGVSRPVI 107
Query: 111 VACSAGNSGPAPSS 124
A G + SS
Sbjct: 108 AAAITSKDGSSLSS 121
>pdb|1IC6|A Chain A, Structure Of A Serine Protease Proteinase K From
Tritirachium Album Limber At 0.98 A Resolution
pdb|1P7V|A Chain A, Structure Of A Complex Formed Between Proteinase K And A
Designed Heptapeptide Inhibitor Pro-Ala-Pro-Phe-Ala-Ala-
Ala At Atomic Resolution
pdb|1P7W|A Chain A, Crystal Structure Of The Complex Of Proteinase K With A
Designed Heptapeptide Inhibitor
Pro-Ala-Pro-Phe-Ala-Ser-Ala At Atomic Resolution
pdb|2HD4|A Chain A, Crystal Structure Of Proteinase K Inhibited By A
Lactoferrin Octapeptide Gly-Asp-Glu-Gln-Gly-Glu-Asn-Lys
At 2.15 A Resolution
pdb|2DQK|A Chain A, Crystal Structure Of The Complex Of Proteinase K With A
Specific Lactoferrin Peptide Val-Leu-Leu-His At 1.93 A
Resolution
pdb|2HPZ|A Chain A, Crystal Structure Of Proteinase K Complex With A Synthetic
Peptide Klkllvvirlk At 1.69 A Resolution
pdb|2DUJ|A Chain A, Crystal Structure Of The Complex Formed Between Proteinase
K And A Synthetic Peptide Leu-Leu-Phe-Asn-Asp At 1.67 A
Resolution
pdb|2ID8|A Chain A, Crystal Structure Of Proteinase K
pdb|2G4V|A Chain A, Anomalous Substructure Of Proteinase K
pdb|2PQ2|A Chain A, Structure Of Serine Proteinase K Complex With A Highly
Flexible Hydrophobic Peptide At 1.8a Resolution
pdb|2PWA|A Chain A, Crystal Structure Of The Complex Of Proteinase K With
Alanine Boronic Acid At 0.83a Resolution
pdb|2PWB|A Chain A, Crystal Structure Of The Complex Of Proteinase K With
Coumarin At 1.9 A Resolution
pdb|2PYZ|A Chain A, Crystal Structure Of The Complex Of Proteinase K With
Auramine At 1.8a Resolution
pdb|2V8B|A Chain A, Sad Structure Solution Of Proteinase K Grown In Selenate
Solution
pdb|3DYB|A Chain A, Proteinase K- Digalacturonic Acid Complex
pdb|3GT3|A Chain A, Structure Of Proteinase K With The Mad Triangle B3c
pdb|3GT4|A Chain A, Structure Of Proteinase K With The Magic Triangle I3c
pdb|3OSZ|A Chain A, Crystal Structure Of The Complex Of Proteinase K With An
Antimicrobial Nonapeptide, At 2.26 A Resolution
pdb|3L1K|A Chain A, Sad Structure Solution Of Proteinase K Grown In Potassium
Tellurate Solution
pdb|3AJ8|A Chain A, X-Ray Analysis Of Crystal Of Proteinase K Obtained From
H2o Solution Using Peg 8000
pdb|3AJ9|A Chain A, X-Ray Analysis Of Crystal Of Proteinase K Obtained From
D2o Solution Using Peg 8000
pdb|3Q40|A Chain A, Sulphur Sad Structure Solution Of Proteinase K Grown In
So4-Less Solution.
pdb|3Q5G|A Chain A, Sulphur Sad Structure Solution Of Proteinase K Grown In
So4 Solution
pdb|3QMP|A Chain A, Selenium Sad Structure Solution Of Proteinase K Grown In
So4-Less Solution And Soaked In Selenate.
pdb|4B5L|A Chain A, The 1.6 A High Energy Room Temperature Structure Of
Proteinase K At 38.4 Kev And 0.04 Mgy
pdb|4FON|A Chain A, High Energy Remote Sad Structure Solution Of Proteinase K
From The 37.8 Kev Tellurium K Edge
Length = 279
Score = 28.5 bits (62), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 13/44 (29%)
Query: 310 DITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHV 353
DI PG +IL+ W S+ S SGTSM+ PHV
Sbjct: 200 DIFGPGTDILSTWIGGSTRS-------------ISGTSMATPHV 230
>pdb|3F7O|A Chain A, Crystal Structure Of Cuticle-degrading Protease From
Paecilomyces Lilacinus (pl646)
pdb|3F7O|B Chain B, Crystal Structure Of Cuticle-degrading Protease From
Paecilomyces Lilacinus (pl646)
Length = 284
Score = 28.5 bits (62), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 13/44 (29%)
Query: 310 DITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHV 353
DI APG NIL+ W ++ SGTSM+ PH+
Sbjct: 203 DIFAPGSNILSTWIGGTT-------------NTISGTSMATPHI 233
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,512,099
Number of Sequences: 62578
Number of extensions: 738287
Number of successful extensions: 1735
Number of sequences better than 100.0: 91
Number of HSP's better than 100.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 1515
Number of HSP's gapped (non-prelim): 175
length of query: 557
length of database: 14,973,337
effective HSP length: 104
effective length of query: 453
effective length of database: 8,465,225
effective search space: 3834746925
effective search space used: 3834746925
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)