Query 008679
Match_columns 557
No_of_seqs 289 out of 2276
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 09:12:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008679.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008679hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 7E-107 2E-111 896.7 47.7 523 2-556 101-644 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 1.3E-97 5E-102 824.5 46.1 518 2-556 92-619 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 1.6E-75 5.5E-80 673.0 41.6 475 1-556 85-605 (926)
4 1y9z_A Alkaline serine proteas 100.0 7.7E-50 2.6E-54 426.4 19.6 330 2-436 63-436 (441)
5 3afg_A Subtilisin-like serine 100.0 2E-46 6.9E-51 407.5 19.5 236 1-417 177-419 (539)
6 3lxu_X Tripeptidyl-peptidase 2 100.0 1.5E-45 5.3E-50 421.9 24.9 351 2-555 270-651 (1354)
7 1gci_A Subtilisin; hydrolase, 100.0 3.2E-44 1.1E-48 358.0 19.1 210 2-415 60-269 (269)
8 4h6x_A Thiazoline oxidase/subt 100.0 1.5E-44 5.2E-49 374.9 13.7 227 2-415 107-337 (357)
9 1dbi_A AK.1 serine protease; h 100.0 1.3E-43 4.4E-48 355.8 19.0 210 2-415 70-279 (280)
10 1r0r_E Subtilisin carlsberg; h 100.0 1.1E-43 3.8E-48 355.3 18.0 210 2-415 61-274 (274)
11 3zxy_A Subtilisin-like protein 100.0 3.7E-44 1.3E-48 360.7 12.0 222 2-415 49-274 (282)
12 1to2_E Subtilisin BPN'; serine 100.0 3.3E-43 1.1E-47 353.1 18.7 211 2-416 62-276 (281)
13 1thm_A Thermitase; hydrolase(s 100.0 7.6E-43 2.6E-47 350.2 19.2 210 2-415 69-278 (279)
14 2z2z_A TK-subtilisin precursor 100.0 2.3E-43 8E-48 371.1 13.1 213 1-416 147-392 (395)
15 2x8j_A Intracellular subtilisi 100.0 2E-42 6.9E-47 354.6 17.2 212 2-416 84-311 (327)
16 1r6v_A Subtilisin-like serine 100.0 2.2E-42 7.6E-47 380.4 17.6 243 2-427 198-450 (671)
17 2ixt_A 36KDA protease; serine 100.0 8.7E-42 3E-46 348.1 19.9 228 2-410 69-309 (310)
18 3t41_A Epidermin leader peptid 100.0 2.2E-42 7.4E-47 372.5 15.1 215 2-417 199-466 (471)
19 4h6w_A N-terminal cyanobactin 100.0 1.1E-42 3.8E-47 354.1 11.8 222 2-415 62-287 (306)
20 2z30_A TK-subtilisin; thermoco 100.0 2.3E-42 7.8E-47 353.6 14.1 213 1-416 72-317 (320)
21 2iy9_A SUBA; toxin, shiga, pla 100.0 4.6E-42 1.6E-46 355.6 15.3 218 2-416 87-329 (347)
22 3lpc_A APRB2; protease, subtil 100.0 6.9E-42 2.4E-46 353.4 15.7 221 2-416 102-337 (340)
23 1wmd_A Protease; alpha-beta hy 100.0 7.4E-42 2.5E-46 364.3 15.9 247 2-418 66-320 (434)
24 2pwa_A Proteinase K; structure 100.0 2E-39 6.7E-44 324.9 14.4 187 1-384 66-260 (279)
25 1sh7_A Extracellular subtilisi 100.0 1.3E-38 4.6E-43 319.7 18.8 188 2-385 68-258 (284)
26 2b6n_A Proteinase K; S binding 100.0 6.6E-38 2.3E-42 314.1 19.6 189 2-384 70-261 (278)
27 1p8j_A Furin precursor; prohor 100.0 6.2E-39 2.1E-43 344.8 12.6 235 2-418 85-332 (471)
28 4dzt_A Aqualysin-1, aqualysin- 100.0 5E-38 1.7E-42 314.9 17.6 191 1-385 67-260 (276)
29 2oxa_A Extracellular serine pr 100.0 9.1E-38 3.1E-42 345.3 21.1 125 288-420 264-429 (600)
30 2qtw_B Proprotein convertase s 100.0 9.4E-38 3.2E-42 333.4 16.3 224 2-415 72-313 (546)
31 2id4_A Kexin; KEX2, kexin, fur 100.0 6.7E-38 2.3E-42 339.0 14.2 230 2-418 98-344 (503)
32 3f7m_A Alkaline serine proteas 100.0 9.6E-38 3.3E-42 313.3 14.3 188 1-385 67-262 (279)
33 2p4e_P Proprotein convertase s 100.0 2.8E-39 9.6E-44 353.8 0.0 193 2-384 224-423 (692)
34 3hjr_A Extracellular serine pr 100.0 1.1E-33 3.7E-38 313.6 24.5 265 1-417 112-426 (600)
35 1ga6_A Serine-carboxyl protein 99.9 3.2E-22 1.1E-26 207.1 9.0 99 33-140 91-206 (372)
36 1t1e_A Kumamolisin; proenzyme, 99.8 2.3E-21 7.7E-26 210.5 9.5 97 30-140 273-383 (552)
37 3icu_A E3 ubiquitin-protein li 99.0 2.4E-09 8.3E-14 99.2 11.9 94 187-280 82-187 (194)
38 3edy_A Tripeptidyl-peptidase 1 98.9 2.5E-09 8.7E-14 115.2 10.4 76 65-140 285-374 (544)
39 2ek8_A Aminopeptidase; metallo 97.4 0.00044 1.5E-08 72.5 9.4 74 194-267 106-182 (421)
40 3iib_A Peptidase M28; YP_92679 97.0 0.0027 9.1E-08 67.0 10.7 82 198-279 124-226 (444)
41 3kas_A Transferrin receptor pr 96.9 0.0017 5.8E-08 71.3 8.0 69 199-267 128-230 (640)
42 3fed_A Glutamate carboxypeptid 96.8 0.0012 4.1E-08 73.2 6.1 71 198-268 150-268 (707)
43 2ys4_A Hydrocephalus-inducing 95.2 0.073 2.5E-06 45.2 8.5 52 466-522 40-91 (122)
44 2r39_A FIXG-related protein; s 91.5 2.8 9.6E-05 34.9 12.0 54 468-523 32-85 (118)
45 3qbt_B Inositol polyphosphate 89.8 3.2 0.00011 35.8 11.1 89 467-556 43-137 (140)
46 1y9z_A Alkaline serine proteas 88.4 0.34 1.2E-05 50.6 4.6 31 286-324 181-211 (441)
47 2e6j_A Hydin protein; PAPD, st 86.5 1.4 4.9E-05 36.1 6.5 56 466-522 25-81 (112)
48 3zyz_A Beta-D-glucoside glucoh 77.7 23 0.00078 39.2 13.6 89 468-557 614-713 (713)
49 3qis_A Inositol polyphosphate 76.0 30 0.001 34.8 13.0 57 466-523 45-105 (366)
50 2qsv_A Uncharacterized protein 72.9 19 0.00064 33.4 9.9 79 467-554 19-103 (220)
51 3idu_A Uncharacterized protein 71.3 15 0.00051 31.0 7.9 53 466-522 32-85 (127)
52 3isy_A Bsupi, intracellular pr 67.1 41 0.0014 28.0 9.6 71 466-542 17-104 (120)
53 1z9l_A Vesicle-associated memb 65.9 19 0.00066 30.2 7.6 53 467-522 27-79 (128)
54 1m1s_A WR4; structural genomic 65.8 29 0.001 28.7 8.4 51 469-522 25-75 (116)
55 1msp_A MSP, major sperm protei 60.3 23 0.00079 29.7 7.0 52 468-522 26-77 (126)
56 1wic_A Hypothetical protein ri 59.9 25 0.00084 30.6 7.3 52 468-522 36-87 (152)
57 1row_A SSP-19, MSP-domain prot 59.5 32 0.0011 28.1 7.5 50 470-522 18-67 (109)
58 2cri_A Vesicle-associated memb 55.5 23 0.0008 30.5 6.4 53 467-522 31-83 (147)
59 1w8o_A Bacterial sialidase; 3D 54.5 84 0.0029 33.4 12.1 63 456-522 363-426 (601)
60 2x41_A Beta-glucosidase; hydro 53.0 29 0.001 38.3 8.1 68 453-523 596-678 (721)
61 3e9t_A Na/Ca exchange protein; 51.4 73 0.0025 25.9 8.5 64 456-522 8-77 (114)
62 3abz_A Beta-glucosidase I; gly 51.3 33 0.0011 38.7 8.2 67 453-520 716-795 (845)
63 2qsv_A Uncharacterized protein 50.3 1.5E+02 0.0051 27.0 11.9 53 467-522 134-186 (220)
64 1wgl_A TOLL-interacting protei 49.4 13 0.00046 26.7 3.1 36 347-382 3-38 (59)
65 2kq1_A BH0266 protein; solutio 35.9 6.8 0.00023 32.6 -0.3 52 471-522 57-110 (119)
66 3ead_A Na/Ca exchange protein; 34.7 1.2E+02 0.0041 25.5 7.5 64 455-521 9-78 (137)
67 2l0d_A Cell surface protein; s 33.6 1.4E+02 0.0048 24.4 7.4 24 466-489 18-42 (114)
68 3sd2_A Putative member of DUF3 31.5 2E+02 0.0068 23.0 8.4 66 459-541 35-100 (101)
69 1ni7_A ER75, hypothetical prot 29.0 42 0.0014 29.3 3.6 31 343-374 79-109 (155)
70 3fso_A Integrin beta-4, GP150; 28.2 1.3E+02 0.0045 24.8 6.5 65 454-521 9-79 (123)
71 3hrz_B Cobra venom factor; ser 27.8 1.9E+02 0.0064 27.1 8.4 66 453-521 84-154 (252)
72 3q48_A Chaperone CUPB2; IG fol 25.4 3.8E+02 0.013 25.2 9.9 54 467-521 42-103 (257)
73 3g0m_A Cysteine desulfuration 24.8 40 0.0014 28.9 2.6 33 341-374 70-102 (141)
74 2hr0_B Complement C3 alpha' ch 24.3 1.3E+02 0.0044 34.1 7.6 67 453-522 83-155 (915)
75 2kut_A Uncharacterized protein 23.1 83 0.0028 26.2 4.2 55 466-522 15-74 (122)
76 4fxk_B Complement C4-A alpha c 22.8 93 0.0032 34.4 5.9 65 454-521 157-224 (767)
77 4acq_A Alpha-2-macroglobulin; 22.5 2.2E+02 0.0075 34.1 9.3 67 453-522 771-840 (1451)
78 3erx_A Pseudoazurin; copper pr 20.8 1.4E+02 0.0048 24.6 5.2 21 496-517 15-35 (123)
79 4ep8_B Urease subunit beta; al 20.6 1.8E+02 0.0061 23.2 5.3 50 467-518 18-82 (101)
80 2dhy_A CUE domain-containing p 20.2 74 0.0025 23.4 2.9 26 356-381 21-46 (67)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=6.9e-107 Score=896.74 Aligned_cols=523 Identities=37% Similarity=0.611 Sum_probs=470.6
Q ss_pred CCCchhhHHhhccCCCCCCCccCCCCCceeeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHHCCCcEEE
Q 008679 2 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDGVHVLS 81 (557)
Q Consensus 2 ~GHGThVAgiiAG~~~~~~~~~~g~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~A~~~gvdVIn 81 (557)
+||||||||||||+...+.+++ |++.+.+.||||+|+|++||+|+..+ |..+++++||++|+++|+||||
T Consensus 101 ~GHGThVAgiiag~~~~~~~~~-G~~~g~~~GvAP~A~l~~~kv~~~~g---------~~~~~i~~Ai~~A~~~gvdVIn 170 (649)
T 3i6s_A 101 DGHGTHCASITAGNFAKGVSHF-GYAPGTARGVAPRARLAVYKFSFNEG---------TFTSDLIAAMDQAVADGVDMIS 170 (649)
T ss_dssp SSHHHHHHHHHHCCCEEEEEET-TEEEEEECCSSTTCEEEEEECEETTE---------ECHHHHHHHHHHHHHTTCSEEE
T ss_pred CCcHHHHHHHHhCCCCcCcccc-ccccCceeEECCCCEEEEEeccCCCC---------CCHHHHHHHHHHHHHcCCCEEE
Confidence 6999999999999988888887 88888899999999999999999864 8999999999999999999999
Q ss_pred EecCCCCCCCCCcchHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCCCceEEecccccCcceeeeEEeCCCcEEEeeee
Q 008679 82 ISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNLAPWLITVGAGSLDRDFVGPVVLGTGMEIIGKTV 161 (557)
Q Consensus 82 ~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~ap~vitVga~~~~~~~~~~~~~~~~~~~~g~~~ 161 (557)
||||.. ...+..++++.++++|+++|++||+||||+|+...++.+.+||+|+|||++.+|.|...+.++|++.+.|+++
T Consensus 171 ~SlG~~-~~~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgAst~dr~f~~~~~lgng~~~~g~sl 249 (649)
T 3i6s_A 171 ISYGYR-FIPLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASGHTDRTFAGTLTLGNGLKIRGWSL 249 (649)
T ss_dssp ECCCCC-SCCGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEEEECSCEEEEEEEETTSCEEEEECC
T ss_pred eCCccC-CcccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceEEEeeeecccceeeEEEeCCCcEEeeeec
Confidence 999984 4567789999999999999999999999999998999999999999999999999999999999999999998
Q ss_pred ccCCC-CceeeeEeecccccCCcCCCCCCCcCCCCCCCCCc--cceEEEEeeCCccchhhhHHHhhcCceEEEEEeCCCC
Q 008679 162 TPYNL-KKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKV--KGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPAN 238 (557)
Q Consensus 162 ~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~c~~~~~~~~~~--~gkivl~~~g~~~~~~k~~~~~~~Ga~gvi~~n~~~~ 238 (557)
+.... ...+||++.. ....|.+..++..++ +||||||+|+.|.+.+|.++++++|+.|+|++|+.
T Consensus 250 ~~~~~~~~~~plv~~~----------~~~~C~~~~l~~~~vdl~GkIvlc~~g~~~~~~k~~~~~~~Ga~g~i~~n~~-- 317 (649)
T 3i6s_A 250 FPARAFVRDSPVIYNK----------TLSDCSSEELLSQVENPENTIVICDDNGDFSDQMRIITRARLKAAIFISEDP-- 317 (649)
T ss_dssp CSSCBCEEEEEEECCT----------TTTTCCCHHHHTTSSSGGGCEEEECCCSCHHHHHHHHHHHTCSEEEEECCCG--
T ss_pred ccCcccCcceeeEecc----------cccccccccccccccccCCcEEEEeCCCccHHHHHHHHHhcCceEEEEecCc--
Confidence 87655 6778999864 346799988888777 99999999999999999999999999999999986
Q ss_pred CCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcCCeeeecCCcE
Q 008679 239 GNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDITAPGLNI 318 (557)
Q Consensus 239 ~~~~~~~~~~ip~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I 318 (557)
.....+.+.+|+++|+.++++.|++|++++.+++++|.+..++......+.++.||||||+...+++|||||+|||++|
T Consensus 318 -~~~~~~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~~~~~~va~FSSrGP~~~~~~ilKPDI~APG~~I 396 (649)
T 3i6s_A 318 -GVFRSATFPNPGVVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPVVAASSARGPSRSYLGISKPDILAPGVLI 396 (649)
T ss_dssp -GGGGCCCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCCSSCCEECTTSCCSSCTTCTTSCSCCEEEECSSE
T ss_pred -cccccccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEeecceeeccCCCCcccccCCCCCCCCCCCccCCeEEeCCCCe
Confidence 3455677899999999999999999999999999999999999888889999999999999988899999999999999
Q ss_pred EecccCCCCCCccccCc-cccceeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHccccccCCCCCcccCC-CCC
Q 008679 319 LAAWSEASSPSKLAFDK-RIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNNKALPITNA-DGS 396 (557)
Q Consensus 319 ~sa~~~~~~~~~~~~~~-~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~-~~~ 396 (557)
+++|+..........+. +...|..|||||||||||||++|||||+||+|+|++||++||+||.+++..++++.+. .+.
T Consensus 397 lsa~~~~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~P~~Spa~IksaLmtTA~~~~~~g~~i~~~~~~~ 476 (649)
T 3i6s_A 397 LAAYPPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTTADPLDNTRKPIKDSDNNK 476 (649)
T ss_dssp EEECCTTSCCEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCBCTTSSBCEETTTSS
T ss_pred EeecCCCCCccccccccccccceecccccccccHHHHHHHHHHHHhCCCCCHHHHHHHHhcccccccCCCCcccccccCC
Confidence 99999865433322222 3468999999999999999999999999999999999999999999999998888764 466
Q ss_pred CCCCCeeeccccCccCcCCCCceeeccchhhhhhhhcCCCCCC------CCccc--CCCCCCCCCCCCCCeeEeec-CCc
Q 008679 397 IATPFSFGSGHFRPTKAADPGLVYDASYEDYLLYLCSHGFSFT------NPVFR--CPNKPPSALNLNYPSIAIPN-LNG 467 (557)
Q Consensus 397 ~~~~~~~G~G~vn~~~A~~~~lv~~~~~~~~~~~~~~~~~~~~------~~~~~--~~~~~~~~~~ln~ps~~~~~-~~~ 467 (557)
++++++||+|+||+.+|++||||||++++||++|||+++|+.+ +..+. |+. ...+||||||+++. +.+
T Consensus 477 ~a~~~~~GaG~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~~~~~~~~~~C~~---~~~~lNyPs~~~~~~~~~ 553 (649)
T 3i6s_A 477 AATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIARSSASHNCSN---PSADLNYPSFIALYSIEG 553 (649)
T ss_dssp BCCHHHHTTCBCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHHHHTTTSCC-CCC---CCCCCCCSSEEEEECCSS
T ss_pred cCCcCCCCeeeeCHHHhcCccccccCCchhHHHhhhcCCCCcccceeeecCCCcCCCCC---chhhcCCCcEEeecccCC
Confidence 8899999999999999999999999999999999999999865 34456 985 46799999999987 566
Q ss_pred e-----EEEEEEEEEcCCCCeEEEEEeeCCCccEEEEecceEEEcCCCcEEEEEEEEEeCcccccccCCCceEEEEEEEE
Q 008679 468 T-----VIVKRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRLGSETTRQGLTKQYVFGWYRWT 542 (557)
Q Consensus 468 ~-----~t~~~tvtn~~~~~~ty~~~v~~~~g~~~~v~p~~~~~~~~g~~~~~~vt~~~~~~~~~~~~~~~~~~G~l~~~ 542 (557)
. ++|+|||||||+...+|+++++.|.|++|+|+|++|+|++.+|+++|+|||+.. ....+.|.||+|+|+
T Consensus 554 ~~~~~~~~~~Rtvtnvg~~~~~y~~~v~~p~g~~v~v~P~~l~f~~~~~~~~f~v~~~~~-----~~~~~~~~fg~l~w~ 628 (649)
T 3i6s_A 554 NFTLLEQKFKRTVTNVGKGAATYKAKLKAPKNSTISVSPQILVFKNKNEKQSYTLTIRYI-----GDEGQSRNVGSITWV 628 (649)
T ss_dssp CCCCEEEEEEEEEEECC--CEEEEEEEECCTTEEEEEESSEEEECC-CCEEEEEEEEEEC-----CC---CCCEEEEEEE
T ss_pred CCccceEEEEEEEEEeCCCCcEEEEEEecCCCCEEEEECCEEEEecCCCEEEEEEEEEec-----ccCCCceEEEEEEEE
Confidence 6 899999999999899999999999999999999999999899999999999986 344567899999999
Q ss_pred C--CccEEEeEEEEEe
Q 008679 543 D--GLHLVRSPMAVSF 556 (557)
Q Consensus 543 ~--~~~~v~~P~~~~~ 556 (557)
+ ++|.||+||+|++
T Consensus 629 ~~~~~h~vrsPi~v~~ 644 (649)
T 3i6s_A 629 EQNGNHSVRSPIVTSP 644 (649)
T ss_dssp ETTSCCEEEEEEEEEE
T ss_pred cCCCCeEEEEeEEEEE
Confidence 8 8999999999986
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=1.3e-97 Score=824.55 Aligned_cols=518 Identities=39% Similarity=0.679 Sum_probs=439.4
Q ss_pred CCCchhhHHhhccCCCCCCCccCCCCCceeeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHHCCCcEEE
Q 008679 2 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDGVHVLS 81 (557)
Q Consensus 2 ~GHGThVAgiiAG~~~~~~~~~~g~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~A~~~gvdVIn 81 (557)
+||||||||||||+...+.++. |...+.++||||+|+|++||||++.+ |..+++++||++|+++|+||||
T Consensus 92 ~GHGTHvAgi~AG~~~~~~~~~-g~~~g~~~GvAP~A~l~~~kv~~~~g---------~~~~di~~a~~~a~~~g~dVin 161 (621)
T 3vta_A 92 NGHGTHTASTAAGGLVSQANLY-GLGLGTARGGVPLARIAAYKVCWNDG---------CSDTDILAAYDDAIADGVDIIS 161 (621)
T ss_dssp SSHHHHHHHHHHCCCEEEEEET-TEEEEEECCSCTTSEEEEEECEETTE---------ECHHHHHHHHHHHHHHTCSEEE
T ss_pred CcCHHHHHHHHhCcCCCCcccc-ccccccEEEECCCCEEEEEEeecCCC---------CCHHHHHHHHHHHHHhCCCEEE
Confidence 6999999999999987777776 77778899999999999999999875 8899999999999999999999
Q ss_pred EecCCCCCCCCCcchHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCCCceEEecccccCcceeeeEEeCCCcEEEeeee
Q 008679 82 ISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNLAPWLITVGAGSLDRDFVGPVVLGTGMEIIGKTV 161 (557)
Q Consensus 82 ~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~ap~vitVga~~~~~~~~~~~~~~~~~~~~g~~~ 161 (557)
||||+..+.++..+++++++++|+++||+||+||||+|+...++.+.+||+++|++++.++.+...+.++++..+.+.++
T Consensus 162 ~SlG~~~~~~~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a~~~~~v~ast~d~~~~~~~~~~~~~~~~~~s~ 241 (621)
T 3vta_A 162 LSVGGANPRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMDRKFVTQVQIGNGQSFQGVSI 241 (621)
T ss_dssp ECCCCCCGGGGGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCCTTSEEEEEECCSEEEEEEEEETTSCEEEEBCC
T ss_pred ecCCCCCCCCcCCcHHHHHHHHHHHCCCEEEEeCCCCCCCCcccCCCCCCceeEEEeeccccceeeEEeccCceeeeeec
Confidence 99999666677889999999999999999999999999999999999999999999999999999999999999988877
Q ss_pred ccCCCCceeeeEeecccccCCcCCCCCCCcCCCCCCCCCccceEEEEeeCCccchhhhHHHhhcCceEEEEEeCCCCCCc
Q 008679 162 TPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNE 241 (557)
Q Consensus 162 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~ 241 (557)
.... ...+++++..+.............|.+..++..+++|||++|+++ +..+..+....|+.++|++++...
T Consensus 242 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~gkivl~~~~---~~~~~~~~~~~Ga~gvi~~~~~~~--- 314 (621)
T 3vta_A 242 NTFD-NQYYPLVSGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVCEAS---FGPHEFFKSLDGAAGVLMTSNTRD--- 314 (621)
T ss_dssp CCSC-CEEECEEETTTSCCTTCCHHHHTTTCTTCSCGGGTTTSEEECSSC---CCHHHHHHHHTTCSEEEEECSCCS---
T ss_pred ccCC-CcccccccccccccccccccccccccccccccccccceEEEEecC---CChhHHhhhhcceeEEEEEecCCC---
Confidence 5433 456777777665555545555678999999999999999999864 556777888899999999987543
Q ss_pred cccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcCCeeeecCCcEEec
Q 008679 242 YSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDITAPGLNILAA 321 (557)
Q Consensus 242 ~~~~~~~ip~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa 321 (557)
..+.+.+|...++.+++..++.|+..+....+.+.....+ .+...+.++.||||||+...++++||||+|||++|+|+
T Consensus 315 -~~~~~~lP~~~v~~~~g~~i~~~~~~~~~~~a~~~~~~~~-~~~~~~~va~FSSrGP~~~~~~ilKPDI~APG~~Ilsa 392 (621)
T 3vta_A 315 -YADSYPLPSSVLDPNDLLATLRYIYSIRSPGATIFKSTTI-LNASAPVVVSFSSRGPNRATKDVIKPDISGPGVEILAA 392 (621)
T ss_dssp -SCCCCSSSEEEECHHHHHHHHHHHHHHSSCCEEECCCEEE-ECTTCCCBCTTSCCCSCTTCTTSCSCCEEEECSSEEEE
T ss_pred -cccccccceEEECHHHHHHHHHHHhccCCcceEEecceEe-ccCCCCceeeecCCCCCCCCCCeeccccccCCcceEee
Confidence 3456789999999999999999999999988888665544 45568999999999999877899999999999999999
Q ss_pred ccCCCCCCccccCccccceeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHccccccCCCCCcccCCCCCCCCCC
Q 008679 322 WSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNNKALPITNADGSIATPF 401 (557)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~ 401 (557)
|+...... ...+...|..|||||||||||||++|||||+||+|+|++||++||+||++++..+ .+..++
T Consensus 393 ~~~~~~~~---~~~~~~~y~~~SGTSMAaPhVAGvaALl~q~~P~~spa~IksaLmtTA~~~~~~~--------~~~~~~ 461 (621)
T 3vta_A 393 WPSVAPVG---GIRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTASPMNARF--------NPQAEF 461 (621)
T ss_dssp CCSSSCBT---TBCCCCSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTCBCCCTTT--------CTTTHH
T ss_pred cCcccccc---CcCCCCcceEecCccccchhhhhHHHHHHHHCCCCCHHHHHHHHHhcCCcccccC--------CCCCch
Confidence 98654322 2234468999999999999999999999999999999999999999999887543 456789
Q ss_pred eeeccccCccCcCCCCceeeccchhhhhhhhcCCCCCC------CCcccCCCCC-CCCCCCCCCeeEee---cCCceEEE
Q 008679 402 SFGSGHFRPTKAADPGLVYDASYEDYLLYLCSHGFSFT------NPVFRCPNKP-PSALNLNYPSIAIP---NLNGTVIV 471 (557)
Q Consensus 402 ~~G~G~vn~~~A~~~~lv~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~-~~~~~ln~ps~~~~---~~~~~~t~ 471 (557)
+||+|+||+.+|++||||||+...||+.|||+++|+.+ +....|+... ....+||||||++. ++..+++|
T Consensus 462 ~~GaG~v~~~~A~~pGLvyd~~~~dy~~~lc~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lN~pS~~v~~~~~~~~~~t~ 541 (621)
T 3vta_A 462 AYGSGHVNPLKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRITGDYSACTSGNTGRVWDLNYPSFGLSVSPSQTFNQYF 541 (621)
T ss_dssp HHTTCBCCHHHHSCCSEECCCCGGGCC-----------------------------CGGGSCCSSEEEECCSSCCEEEEE
T ss_pred hcCCCccCHHHhcCCCeEeecccchhhhhhcccCCCchhheeeeccccccCCCCcCcccccccccEEEEccCCCceEEEE
Confidence 99999999999999999999999999999999999876 2345676543 34679999999985 55678999
Q ss_pred EEEEEEcCCCCeEEEEEeeCCCccEEEEecceEEEcCCCcEEEEEEEEEeCcccccccCCCceEEEEEEEECCccEEEeE
Q 008679 472 KRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRLGSETTRQGLTKQYVFGWYRWTDGLHLVRSP 551 (557)
Q Consensus 472 ~~tvtn~~~~~~ty~~~v~~~~g~~~~v~p~~~~~~~~g~~~~~~vt~~~~~~~~~~~~~~~~~~G~l~~~~~~~~v~~P 551 (557)
+|||||+|....||+++++.|.|++|+|+|++|+|++.+|+++|+|||+.. .++.|+||+|+|+|++|.||+|
T Consensus 542 ~rtvtnvg~~~~ty~~~v~~p~gv~v~V~P~~l~f~~~~~~~~~~vt~~~~-------~~~~~~~g~l~w~d~~h~Vr~P 614 (621)
T 3vta_A 542 NRTLTSVAPQASTYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVRGS-------IKGFVVSASLVWSDGVHYVRSP 614 (621)
T ss_dssp EEEEEECSSSCEEEEEEEECCSSEEEEEESSEEEECSTTCEEEEEEEEEEC-------CCSSEEEEEEEEECSSCCCEEE
T ss_pred EEEEEccCCCCeEEEEEEECCCCcEEEEecCEEEEcCCCcEEEEEEEEEec-------CCCceEEEEEEEEcCCEEEEeC
Confidence 999999999999999999999999999999999999899999999999874 4678999999999999999999
Q ss_pred EEEEe
Q 008679 552 MAVSF 556 (557)
Q Consensus 552 ~~~~~ 556 (557)
|+|+.
T Consensus 615 i~v~~ 619 (621)
T 3vta_A 615 ITITS 619 (621)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 99984
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=1.6e-75 Score=672.98 Aligned_cols=475 Identities=23% Similarity=0.285 Sum_probs=376.2
Q ss_pred CCCCchhhHHhhccCCCCCCCccCCCCCceeeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHHCCCcEE
Q 008679 1 MDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDGVHVL 80 (557)
Q Consensus 1 ~~GHGThVAgiiAG~~~~~~~~~~g~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~A~~~gvdVI 80 (557)
++||||||||||||+.+.+.+. .+.+.||||+|+|++||+|++.+. ++..+++++||++|+++|+|||
T Consensus 85 ~~gHGThVAgiiAg~~~~~~~~-----~~~~~GvAP~A~l~~~kv~~~~g~-------~~~~~~i~~Ai~~Ai~~gvdVI 152 (926)
T 1xf1_A 85 DQEHGTHVSGILSGNAPSETKE-----PYRLEGAMPEAQLLLMRVEIVNGL-------ADYARNYAQAIRDAINLGAKVI 152 (926)
T ss_dssp SSTTTTHHHHSSCCCCCCCCSC-----SCCTTTTCTTSEEEEEECCCCSCH-------HHHHHHHHHHHHHHHHTTCEEE
T ss_pred CCCcHHHHHHHHhCCCccCccc-----CCceEEECCCCEEEEEEeecCCCC-------CCcHHHHHHHHHHHHHhCCcEE
Confidence 3699999999999986554322 245689999999999999987642 2566789999999999999999
Q ss_pred EEecCCCCC-CCCCcchHHHHHHHHHhCCcEEEEecCCCCCC-------------CCCCCCC--CCceEEecccccCcce
Q 008679 81 SISIGTNQP-FAFNRDGIAIGALNAVKHNILVACSAGNSGPA-------------PSSLSNL--APWLITVGAGSLDRDF 144 (557)
Q Consensus 81 n~SlG~~~~-~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~-------------~~~~~~~--ap~vitVga~~~~~~~ 144 (557)
|||||.... .....++++.++++|+++|++||+||||+|+. ..++.++ +||+|+|||++.++.+
T Consensus 153 n~SlG~~~~~~~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~PA~~~~vitVgA~~~~~~~ 232 (926)
T 1xf1_A 153 NMSFGNAALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPAAADSTLTVASYSPDKQL 232 (926)
T ss_dssp EECCSSCCCTTCCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCSCTTTCCSEEEEEEBCSEEE
T ss_pred EECCCCCCCCccccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCcceecCcccCCceEEEecccccccc
Confidence 999998432 34566788999999999999999999999963 2344555 6999999999999999
Q ss_pred eeeEEe-CCCcEEEeeeecc---CCCCceeeeEeecccccCCcCCCCCCCcCCCCCCCCCccceEEEEeeCCccchhhhH
Q 008679 145 VGPVVL-GTGMEIIGKTVTP---YNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGM 220 (557)
Q Consensus 145 ~~~~~~-~~~~~~~g~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~ 220 (557)
...+.+ +++....+.++.. +.....+|+++... .|.+..+ .+++||||||+|+.|.|.+|..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~------------g~~~~~~--~~v~Gkivl~~rg~~~~~~k~~ 298 (926)
T 1xf1_A 233 TETVRVKTADQQDKEMPVLSTNRFEPNKAYDYAYANR------------GTKEDDF--KDVKGKIALIERGDIDFKDKIA 298 (926)
T ss_dssp EEEEEEECTTSCEEEEEEEEESCCCTTCCEEEEECTT------------SCSTTTT--TTCTTSEEEEECCSSCHHHHHH
T ss_pred ccceEEEcCCCcceeeEEEecCCCCCCceEEEEECCC------------CCCccch--hhcCCeEEEEECCCCCHHHHHH
Confidence 888887 5554444444322 22367789988653 3776666 6999999999999999999999
Q ss_pred HHhhcCceEEEEEeCCCCCCc-cccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCC
Q 008679 221 EVKRAGGVGLILGNSPANGNE-YSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGP 299 (557)
Q Consensus 221 ~~~~~Ga~gvi~~n~~~~~~~-~~~~~~~ip~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP 299 (557)
+++++||.++|++|+...... .......+|+..|+.++++.|++ ....++++......+.....+.++.||||||
T Consensus 299 ~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~iP~~~i~~~~g~~l~~----~~~~ti~~~~~~~~~~~~~~~~~a~FSSrGp 374 (926)
T 1xf1_A 299 KAKKAGAVGVLIYDNQDKGFPIELPNVDQMPAAFISRKDGLLLKD----NPQKTITFNATPKVLPTASGTKLSRFSSWGL 374 (926)
T ss_dssp HHHHTTCSEEEEECSSTTCCCEECCCSTTCCEEEECHHHHHHHHH----CSSCEEEECSSCEEEECSSCSBCCTTSCCCB
T ss_pred HHHhCCCcEEEEEecCCCCcccccCccccccEEEEeHHHHHHHHh----CCceEEEecccceecccCCcceeccccCCCC
Confidence 999999999999998654332 23456789999999999998874 4555666655544556667889999999999
Q ss_pred CCCCCCCcCCeeeecCCcEEecccCCCCCCccccCccccceeeeccccchhhhHHHHHHHHHh----hCCCCCHHH----
Q 008679 300 NALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKA----IHPDWSSAA---- 371 (557)
Q Consensus 300 ~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q----~~p~~s~~~---- 371 (557)
+.. +++||||+|||++|+++++. +.|..|||||||||||||++|||+| .||+|+|+|
T Consensus 375 ~~~--~~lKPDI~APG~~I~sa~~~-------------~~y~~~SGTSMAaPhVAG~aALl~q~~k~~~P~~sp~~~~~~ 439 (926)
T 1xf1_A 375 TAD--GNIKPDIAAPGQDILSSVAN-------------NKYAKLSGTSMSAPLVAGIMGLLQKQYETQYPDMTPSERLDL 439 (926)
T ss_dssp CTT--SCBSCCEEEECCCEEESSSC-------------SSSCEEESCTTHHHHHHHHHHHHHHHHHHSSSSSHHHHHHHH
T ss_pred CCC--CccCceEECCCCCEEeeccC-------------CcceecCccchhHHHHHHHHHHHHHHHhccCCCCCHHHHHHH
Confidence 964 99999999999999999986 6899999999999999999999965 599999997
Q ss_pred HHHHHHccccccCCCCCcccCCCCCCCCCCeeeccccCccCcCCCCceeeccchhhhhhhhcCCCCCCCCcccCCCCCCC
Q 008679 372 IRSALMTTAWMKNNKALPITNADGSIATPFSFGSGHFRPTKAADPGLVYDASYEDYLLYLCSHGFSFTNPVFRCPNKPPS 451 (557)
Q Consensus 372 ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~A~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (557)
||++||+||+++...+ ....+++++||+|+||+.+|+++.+ |+|..+++.
T Consensus 440 Iks~L~~TA~~~~~~~------~~~~~~~~~~G~G~vn~~~A~~~~~-----------~l~~~~~~~------------- 489 (926)
T 1xf1_A 440 AKKVLMSSATALYDED------EKAYFSPRQQGAGAVDAKKASAATM-----------YVTDKDNTS------------- 489 (926)
T ss_dssp HHHHHHHHSBCCEEGG------GTEECCHHHHTTCBCCHHHHHHCSE-----------EEEESSSSC-------------
T ss_pred HHHHHHhcCCCcccCC------CCccCChhccCCCccCHHHhcCCCe-----------EEEcCCCCc-------------
Confidence 9999999999876431 1234678999999999999999854 567655432
Q ss_pred CCCCCCCeeEeecCCceEEEEEEEEEcCCCC--eEEEEEeeC--CCccEEEEecceEEEcC-------CCcEEEEEEEEE
Q 008679 452 ALNLNYPSIAIPNLNGTVIVKRTVTNVGGSK--SVYFFSAKP--PMGVSVKANPSILFFDH-------IGQKKSFTITVR 520 (557)
Q Consensus 452 ~~~ln~ps~~~~~~~~~~t~~~tvtn~~~~~--~ty~~~v~~--~~g~~~~v~p~~~~~~~-------~g~~~~~~vt~~ 520 (557)
+++.++++.+..+++|||||+|+.+ .+|++++.. +.+..++|.|..|.+.. +||+++|+|||+
T Consensus 490 ------~~i~l~~~~~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~~l~~~~~~~vtv~ag~~~~~~vt~~ 563 (926)
T 1xf1_A 490 ------SKVHLNNVSDKFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPKVLYETSWQKITIPANSSKQVTVPID 563 (926)
T ss_dssp ------SCEEEEEECSEEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEEEEEECCCEEEEECTTEEEEEEEEEE
T ss_pred ------ceeeccccCccEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccceeEeccCCeEEECCCCEEEEEEEEE
Confidence 2345555567899999999999854 567777764 66888888887665543 599999999999
Q ss_pred eCcc---cccccCCCceEEEEEEEE--CCcc-EEEeEEEEEe
Q 008679 521 LGSE---TTRQGLTKQYVFGWYRWT--DGLH-LVRSPMAVSF 556 (557)
Q Consensus 521 ~~~~---~~~~~~~~~~~~G~l~~~--~~~~-~v~~P~~~~~ 556 (557)
.... .+..++++.|+||+|+|+ ++.| .||+||++..
T Consensus 564 ~~~~~~~~~~~~~~~~~~~G~i~~~~~~~~~~~v~~P~~~~~ 605 (926)
T 1xf1_A 564 ASRFSKDLLAQMKNGYFLEGFVRFKQDPTKEELMSIPYIGFR 605 (926)
T ss_dssp CHHHHHHHHHHSTTCEEEEEEEEEESSTTSCCCEEEEEEEEE
T ss_pred cCccchhhcccccCCcEEEEEEEEEeCCCCCCEEEeeeEEEe
Confidence 8521 011345778899999999 4555 4999999864
No 4
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00 E-value=7.7e-50 Score=426.37 Aligned_cols=330 Identities=22% Similarity=0.297 Sum_probs=240.5
Q ss_pred CCCchhhHHhhccCCCCCCCccCCCCCceeeeecCCC--eEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHHC-CCc
Q 008679 2 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLA--RLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRD-GVH 78 (557)
Q Consensus 2 ~GHGThVAgiiAG~~~~~~~~~~g~~~~~~~GvAP~A--~L~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~A~~~-gvd 78 (557)
+||||||||||+|.. + ...+.||||+| +|+.+|+++..+ .+..+++++||+||+++ |+|
T Consensus 63 ~gHGT~vAgiia~~~---------~-~~g~~GvAP~a~~~l~~~kv~~~~g--------~~~~~~~~~ai~~a~~~~g~~ 124 (441)
T 1y9z_A 63 NAHGTHVAGTIAAIA---------N-NEGVVGVMPNQNANIHIVKVFNEAG--------WGYSSSLVAAIDTCVNSGGAN 124 (441)
T ss_dssp CCHHHHHHHHHHCCC---------S-SSBCCCSSCSSCSEEEEEECEETTE--------ECCSSCHHHHHHHHHHTTCCS
T ss_pred CCcHHHHHHHHhccc---------C-CCCceEecCCCCCEEEEEEEeCCCC--------CcCHHHHHHHHHHHHHhcCCc
Confidence 699999999999873 1 12358999995 999999998765 36777899999999999 999
Q ss_pred EEEEecCCCCCCCCCcchHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCCCceEEecccccCcceeeeEEeCC------
Q 008679 79 VLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNLAPWLITVGAGSLDRDFVGPVVLGT------ 152 (557)
Q Consensus 79 VIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~ap~vitVga~~~~~~~~~~~~~~~------ 152 (557)
|||||||... ....+..++.+|.++|++||+||||+|+.....+...+++|+|||.+.+.........+.
T Consensus 125 Vin~S~G~~~----~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~~~~~~~~S~~g~~vdv~A 200 (441)
T 1y9z_A 125 VVTMSLGGSG----STTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDHAAFSQYTDQVEISG 200 (441)
T ss_dssp EEEECCCBSC----CBHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTTCCBCTTSCCCTTEEEEE
T ss_pred EEEeCCCCCC----CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCCCCCeEEEEEECCCCCCCccccCCCceEEEe
Confidence 9999999832 234677788899999999999999999876666677799999999877653222111111
Q ss_pred -------------Cc----EEEeeeeccCCC---Cceee--eEeecccccCCcCCCCCCCcCCC--CCCCCCccceEEEE
Q 008679 153 -------------GM----EIIGKTVTPYNL---KKMHP--LVYAADVVVPGVHQNETNQCLPG--SLTPEKVKGKIVLC 208 (557)
Q Consensus 153 -------------~~----~~~g~~~~~~~~---~~~~~--l~~~~~~~~~~~~~~~~~~c~~~--~~~~~~~~gkivl~ 208 (557)
+. .+.|.+++.... ...++ +.+..+.. ..........|... .++..+++|||+||
T Consensus 201 pG~~i~s~~~~g~g~~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~~-~g~~~~~~~~C~~~~~~~~~~~~~gkivl~ 279 (441)
T 1y9z_A 201 PGEAILSTVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPI-NASATGALAECTVNGTSFSCGNMANKICLV 279 (441)
T ss_dssp ECSSEEEECSTTCEEEEEEEETTEECGGGCCEECEEEEEETTEEEECCC-CCEEEEEEEEEEEETTEEECCCCTTEEEEE
T ss_pred ccCCeeccccCCCcccceeecccccccccccCcccccccCCcccccccc-ccccccchhccccccccccCCCccccEEEE
Confidence 11 112222221100 00000 11111110 00001122347644 45778999999999
Q ss_pred eeCCc-----cchhhhHHHhhcCceEEEEEeCCCCCCc------cccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEE
Q 008679 209 MRGSG-----FKLSKGMEVKRAGGVGLILGNSPANGNE------YSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIK 277 (557)
Q Consensus 209 ~~g~~-----~~~~k~~~~~~~Ga~gvi~~n~~~~~~~------~~~~~~~ip~~~i~~~~g~~l~~~~~~~~~~~~~i~ 277 (557)
+|+.| .+.+|..+++++|+.++|++|+...... .......+|.+.|+.++|+.|++|+.+. +++
T Consensus 280 ~rg~~~~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~----~t~- 354 (441)
T 1y9z_A 280 ERVGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLALKAKLGQS----TTV- 354 (441)
T ss_dssp ECCSCSSSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECHHHHHHHHTTTTSE----EEE-
T ss_pred eccccCcccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccccccCccccEEEEeHHHHHHHHHHhcCC----ccc-
Confidence 99876 7889999999999999999988542211 1223568999999999999999877431 100
Q ss_pred eceEEeecCCCCccccccCCCCCCCCCCCcCCeeeecCCcEEecccCCCCCCccccCccccceeeeccccchhhhHHHHH
Q 008679 278 QARTVLHTQPAPFMANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAA 357 (557)
Q Consensus 278 ~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~a 357 (557)
+.... +.|..+||||||||||||++
T Consensus 355 ------------------------------------------~~~~~-------------~~y~~~sGTSmAaP~VAG~a 379 (441)
T 1y9z_A 355 ------------------------------------------SNQGN-------------QDYEYYNGTSMATPHVSGVA 379 (441)
T ss_dssp ------------------------------------------EEEEE-------------ESEEEECSHHHHHHHHHHHH
T ss_pred ------------------------------------------ccccC-------------CCceeecccccCCcccchHH
Confidence 11111 68999999999999999999
Q ss_pred HHHHhhCCCCCHHHHHHHHHccccccCCCCCcccCCCCCCCCCCeeeccccCccCcCCCCceeeccchhhhhhhhcCCC
Q 008679 358 ALLKAIHPDWSSAAIRSALMTTAWMKNNKALPITNADGSIATPFSFGSGHFRPTKAADPGLVYDASYEDYLLYLCSHGF 436 (557)
Q Consensus 358 ALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~A~~~~lv~~~~~~~~~~~~~~~~~ 436 (557)
|||+|+||+|+|++||++||+||++++..+ ++.+||+|+||+.+|+ ||++|||++++
T Consensus 380 ALl~~~~p~~sp~~ik~~L~~TA~~~~~~g-----------~~~~~G~G~vn~~~A~-----------~~~~~lc~~~~ 436 (441)
T 1y9z_A 380 TLVWSYHPECSASQVRAALNATADDLSVAG-----------RDNQTGYGMINAVAAK-----------AYLDESCTGPT 436 (441)
T ss_dssp HHHHHHCTTSCHHHHHHHHHHHSBCCSSSS-----------CBTTTBTCBCCHHHHH-----------HHHHHCTTCC-
T ss_pred HHHHHHCCCCCHHHHHHHHHhhchhhccCC-----------CcccccccccCHHHHH-----------HHHHhhhcCCC
Confidence 999999999999999999999999886532 3567999999999995 58999998865
No 5
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00 E-value=2e-46 Score=407.46 Aligned_cols=236 Identities=35% Similarity=0.501 Sum_probs=194.5
Q ss_pred CCCCchhhHHhhccCCCCCCCccCCCC-CceeeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHHC----
Q 008679 1 MDGHGTHTASTVAGRRVPNASAFGGFA-EGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRD---- 75 (557)
Q Consensus 1 ~~GHGThVAgiiAG~~~~~~~~~~g~~-~~~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~A~~~---- 75 (557)
++||||||||||||+ +.. .+.+.||||+|+|+.+|++++.+ .+..+++++||+||+++
T Consensus 177 ~~gHGThVAgiiag~---------~~~~~g~~~GvAp~A~l~~~kv~~~~g--------~~~~~~i~~ai~~a~~~~~~~ 239 (539)
T 3afg_A 177 DNGHGTHVASIAAGT---------GAASNGKYKGMAPGAKLVGIKVLNGQG--------SGSISDIINGVDWAVQNKDKY 239 (539)
T ss_dssp SSSHHHHHHHHHHCC---------CGGGTTTTCCSCTTCEEEEEECSCTTS--------EEEHHHHHHHHHHHHHTHHHH
T ss_pred CCCCHHHHHHHHhCc---------CccCCCCEEEECCCCEEEEEEeecCCC--------CcCHHHHHHHHHHHHhhhhhc
Confidence 369999999999987 222 34468999999999999998766 37889999999999986
Q ss_pred CCcEEEEecCCCCCCCCCcchHHHHHHHHHhCCcEEEEecCCCCCCCCCCCC--CCCceEEecccccCcceeeeEEeCCC
Q 008679 76 GVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSN--LAPWLITVGAGSLDRDFVGPVVLGTG 153 (557)
Q Consensus 76 gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~--~ap~vitVga~~~~~~~~~~~~~~~~ 153 (557)
|++|||||||... .....+++..+++++.++|++||+||||+|+...++.. ..+++|+|||...
T Consensus 240 g~~Vin~SlG~~~-~~~~~~~l~~ai~~a~~~GvlvV~AAGN~g~~~~~~~~Pa~~~~vitVgA~~~------------- 305 (539)
T 3afg_A 240 GIKVINLSLGSSQ-SSDGTDSLSQAVNNAWDAGLVVVVAAGNSGPNKYTVGSPAAASKVITVGAVDK------------- 305 (539)
T ss_dssp TEEEEEECCCCCS-CCCSCSHHHHHHHHHHHTTCEEEEECCSCCSSSSCCCTTTTCSSSEEEEEECT-------------
T ss_pred CCcEEEeCCCCCC-CCccchHHHHHHHHHHhcCCEEEEECCCCCCCCCcccCCccCCceEEEeeecC-------------
Confidence 9999999999843 24456789999999999999999999999986555443 4589999997321
Q ss_pred cEEEeeeeccCCCCceeeeEeecccccCCcCCCCCCCcCCCCCCCCCccceEEEEeeCCccchhhhHHHhhcCceEEEEE
Q 008679 154 MEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILG 233 (557)
Q Consensus 154 ~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~gvi~~ 233 (557)
T Consensus 306 -------------------------------------------------------------------------------- 305 (539)
T 3afg_A 306 -------------------------------------------------------------------------------- 305 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eCCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcCCeeee
Q 008679 234 NSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDITA 313 (557)
Q Consensus 234 n~~~~~~~~~~~~~~ip~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~A 313 (557)
.+.+++||||||+.+ +++||||+|
T Consensus 306 ------------------------------------------------------~~~~a~fSs~Gp~~~--~~~kpdi~A 329 (539)
T 3afg_A 306 ------------------------------------------------------YDVITDFSSRGPTAD--NRLKPEVVA 329 (539)
T ss_dssp ------------------------------------------------------TSCBCSSSCCCCCTT--CBCCCSEEE
T ss_pred ------------------------------------------------------CcccccccCCCCCCC--CCCcccEec
Confidence 246789999999985 899999999
Q ss_pred cCCcEEecccCCCCCCccccCccccceeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHccccccCCCCCcccCC
Q 008679 314 PGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNNKALPITNA 393 (557)
Q Consensus 314 PG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~ 393 (557)
||++|+++++...... +.....|..++|||||||||||++|||+|+||+|++++||++|++||+++...+
T Consensus 330 PG~~I~s~~~~~~~~~----~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~s~~~vk~~L~~tA~~~~~~~------ 399 (539)
T 3afg_A 330 PGNWIIAARASGTSMG----QPINDYYTAAPGTAMATPHVAGIAALLLQAHPSWTPDKVKTALIETADIVKPDE------ 399 (539)
T ss_dssp ECSSEEEECCTTCCCS----EECSSSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSBCSSGGG------
T ss_pred CcCCEEeeccCCCCCC----CCCcccccccCchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCCC------
Confidence 9999999996532110 111136999999999999999999999999999999999999999999875321
Q ss_pred CCCCCCCCeeeccccCccCcCCCC
Q 008679 394 DGSIATPFSFGSGHFRPTKAADPG 417 (557)
Q Consensus 394 ~~~~~~~~~~G~G~vn~~~A~~~~ 417 (557)
.+++.||+|+||+.+|++..
T Consensus 400 ----~~~~~~G~G~vn~~~Al~~~ 419 (539)
T 3afg_A 400 ----IADIAYGAGRVNAYKAAYYD 419 (539)
T ss_dssp ----CSBTTTBTCBCCHHHHHTGG
T ss_pred ----CCccCccCCccCHHHHhhhc
Confidence 35678999999999999853
No 6
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00 E-value=1.5e-45 Score=421.93 Aligned_cols=351 Identities=22% Similarity=0.197 Sum_probs=239.7
Q ss_pred CCCchhhHHhhccCCCCCCCccCCCCCceeeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHH-----CC
Q 008679 2 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIR-----DG 76 (557)
Q Consensus 2 ~GHGThVAgiiAG~~~~~~~~~~g~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~A~~-----~g 76 (557)
+||||||||||||.. +...+.||||+|+|+.+|+++.... ..+....++++|.+|++ .|
T Consensus 270 ~GHGThVAGIIAa~~----------N~~g~~GVAP~AkI~~vKVld~~~g------~~~t~s~l~~AI~~Aid~a~~~~g 333 (1354)
T 3lxu_X 270 SPHGTHVSSIASGNH----------SSRDVDGVAPNAKIVSMTIGDGRLG------SMETGTALVRAMTKVMELCRDGRR 333 (1354)
T ss_dssp CHHHHHHHHHHCCCC----------SSSSSCCSCTTCEEEEEECBCTTTS------SCBCHHHHHHHHHHHHHHHHTTCC
T ss_pred CCcHHHHHHHHhcCC----------CCCCceeecCCCEEEEEEeccCCCC------cccChHHHHHHHHHHHHHHhhcCC
Confidence 599999999999983 2234589999999999999876541 12467788888888888 79
Q ss_pred CcEEEEecCCCCCCCCCcchHHHHHHHHH-hCCcEEEEecCCCCCCCCCCCCC----CCceEEecccccCcceeeeEEeC
Q 008679 77 VHVLSISIGTNQPFAFNRDGIAIGALNAV-KHNILVACSAGNSGPAPSSLSNL----APWLITVGAGSLDRDFVGPVVLG 151 (557)
Q Consensus 77 vdVIn~SlG~~~~~~~~~~~~~~a~~~a~-~~Gv~vV~AAGN~G~~~~~~~~~----ap~vitVga~~~~~~~~~~~~~~ 151 (557)
++|||||||... .....+.+..++.++. ++|++||+||||+|+...++..+ ++++|+|||+..+.........
T Consensus 334 adVINmS~G~~~-~~~~~~~l~~aI~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~ys~- 411 (1354)
T 3lxu_X 334 IDVINMSYGEHA-NWSNSGRIGELMNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAEYAM- 411 (1354)
T ss_dssp CCEEEECCCCCC-SCSSCCHHHHHHHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC-----
T ss_pred ceEEEcCCccCC-CCCccHHHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCcccccCCceEEEEeecCCCCccccccc-
Confidence 999999999943 2233456777888775 89999999999999865554332 5999999996543211100000
Q ss_pred CCcEEEeeeeccCCCCceeeeEeecccccCCcCCCCCCCcCCCCCCCCCccceEEEEeeCCccchhhhHHHhhcCceEEE
Q 008679 152 TGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLI 231 (557)
Q Consensus 152 ~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~gvi 231 (557)
T Consensus 412 -------------------------------------------------------------------------------- 411 (1354)
T 3lxu_X 412 -------------------------------------------------------------------------------- 411 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeCCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcCCee
Q 008679 232 LGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDI 311 (557)
Q Consensus 232 ~~n~~~~~~~~~~~~~~ip~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI 311 (557)
.....+.+++||||||+.+ +.+||||
T Consensus 412 ----------------------------------------------------~~~~~g~~asFSS~GPt~d--g~~KpDI 437 (1354)
T 3lxu_X 412 ----------------------------------------------------REKLPGNVYTWTSRDPCID--GGQGVTV 437 (1354)
T ss_dssp ----------------------------------------------------------CCCCCCCCSCCSS--SSCCEEE
T ss_pred ----------------------------------------------------ccCCCCccccccCCCCCcc--CCCcceE
Confidence 0011267889999999985 8999999
Q ss_pred eecCCcEEecccCCCCCCccccCccccceeeeccccchhhhHHHHHHHHHh----hCCCCCHHHHHHHHHccccccCCCC
Q 008679 312 TAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKA----IHPDWSSAAIRSALMTTAWMKNNKA 387 (557)
Q Consensus 312 ~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q----~~p~~s~~~ik~~L~~TA~~~~~~g 387 (557)
+|||++|+++..... +.|..++|||||||||||++|||++ .+|+|++.+||++|++||++...
T Consensus 438 aAPG~~I~St~~~~~-----------~~y~~~SGTSmAAP~VAGvAALLLSalkq~~P~LTp~qVk~lL~~TA~~~~~-- 504 (1354)
T 3lxu_X 438 CAPGGAIASVPQFTM-----------SKSQLMNGTSMAAPHVAGAVALLISGLKQQNIEYSPYSIKRAISVTATKLGY-- 504 (1354)
T ss_dssp EEEC--------------------------CCCCGGGCHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSBCCTT--
T ss_pred EecCceEEEeecCCC-----------CceecCCCCCHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHHhCccCCC--
Confidence 999999999865421 6789999999999999999999986 79999999999999999998753
Q ss_pred CcccCCCCCCCCCCeeeccccCccCcCCCCceeeccchhhhhhhhcCCCCCCCCcccCCCCCCCCCCCCCCeeEeec--C
Q 008679 388 LPITNADGSIATPFSFGSGHFRPTKAADPGLVYDASYEDYLLYLCSHGFSFTNPVFRCPNKPPSALNLNYPSIAIPN--L 465 (557)
Q Consensus 388 ~~~~~~~~~~~~~~~~G~G~vn~~~A~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~ps~~~~~--~ 465 (557)
.+++.||+|+||+.+|++..+.|+..+.+++.|+|..++++.. .|.+.+ .
T Consensus 505 ----------~~~~~~G~GlLDa~~AV~~a~~~~~~p~~~v~f~~~v~~~~~r------------------gIylR~~~~ 556 (1354)
T 3lxu_X 505 ----------VDPFAQGHGLLNVEKAFEHLTEHRQSKDNMLRFSVRVGNNADK------------------GIHLRQGVQ 556 (1354)
T ss_dssp ----------SCTTTSSSSBCCHHHHHHHHHTTTTCGGGGEEEEEEETTTTBS------------------SEEECSSCC
T ss_pred ----------CCcccccCCEeCHHHHHHHHHhcCCCCccceEEEEEecCCCCC------------------ceEEecccc
Confidence 2567899999999999999999999999999999988754320 011110 1
Q ss_pred CceEEEEEEE----EEcCC----CCeE--EEEEeeCCCccEEEEecceEEEcCCCcEEEEEEEEEeCcccccccCCCceE
Q 008679 466 NGTVIVKRTV----TNVGG----SKSV--YFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRLGSETTRQGLTKQYV 535 (557)
Q Consensus 466 ~~~~t~~~tv----tn~~~----~~~t--y~~~v~~~~g~~~~v~p~~~~~~~~g~~~~~~vt~~~~~~~~~~~~~~~~~ 535 (557)
....+++++| .|... .... -++.+.... --|. -|..+.+ .++.++|.|.+.+. .. ....+
T Consensus 557 ~~~~~~tv~V~p~f~~~~~~~~~~~i~f~~~l~L~~t~-~wv~-~p~~l~l--~~~~r~~~v~vDp~-----~L-~~G~h 626 (1354)
T 3lxu_X 557 RNSIDYNVYIEPIFYNDKEADPKDKFNFNVRLNLIASQ-PWVQ-CGAFLDL--SYGTRSIAVRVDPT-----GL-QPGVH 626 (1354)
T ss_dssp CSCEEEEEEEEEEESSCSCSSSTTCSCCCCEEEEEESS-TTEE-ECSCEEC--TTSCEEEEEEECGG-----GC-CSEEE
T ss_pred CCceEEEEEEeeeecCcccCChhhccceEEEEEEecCC-Ccee-cccceee--cCCCceEEEEECCC-----CC-CCcce
Confidence 1223333333 22111 1111 122222211 1233 3777877 46778898888875 23 44567
Q ss_pred EEEEEEEC-----CccEEEeEEEEE
Q 008679 536 FGWYRWTD-----GLHLVRSPMAVS 555 (557)
Q Consensus 536 ~G~l~~~~-----~~~~v~~P~~~~ 555 (557)
++.|..-| .....|+|+.|-
T Consensus 627 ~~~v~~~D~~~~~~gp~f~ipvTv~ 651 (1354)
T 3lxu_X 627 SAVIRAYDTDCVQKGSLFEIPVTVV 651 (1354)
T ss_dssp EEEEEEEESSCTTSCCSEEEEEEEE
T ss_pred eEEEEEEEcCCcccCceEEeeEEEE
Confidence 88887553 268999999874
No 7
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00 E-value=3.2e-44 Score=358.00 Aligned_cols=210 Identities=32% Similarity=0.441 Sum_probs=181.5
Q ss_pred CCCchhhHHhhccCCCCCCCccCCCCCceeeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHHCCCcEEE
Q 008679 2 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDGVHVLS 81 (557)
Q Consensus 2 ~GHGThVAgiiAG~~~~~~~~~~g~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~A~~~gvdVIn 81 (557)
+||||||||||+|.. + ...+.||||+|+|+.+|+++..+ .+..+++++||+||++++++|||
T Consensus 60 ~gHGT~vAgiia~~~----~------~~~~~GvAp~a~l~~~~v~~~~g--------~~~~~~~~~ai~~a~~~~~~Vin 121 (269)
T 1gci_A 60 NGHGTHVAGTIAALN----N------SIGVLGVAPSAELYAVKVLGASG--------SGSVSSIAQGLEWAGNNGMHVAN 121 (269)
T ss_dssp SSHHHHHHHHHHCCC----S------SSBCCCSSTTCEEEEEECBCTTS--------CBCHHHHHHHHHHHHHTTCSEEE
T ss_pred CCChHHHHHHHhcCc----C------CCCcEEeCCCCEEEEEEeECCCC--------CcCHHHHHHHHHHHHHCCCeEEE
Confidence 699999999999862 1 11257999999999999998765 37888999999999999999999
Q ss_pred EecCCCCCCCCCcchHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCCCceEEecccccCcceeeeEEeCCCcEEEeeee
Q 008679 82 ISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNLAPWLITVGAGSLDRDFVGPVVLGTGMEIIGKTV 161 (557)
Q Consensus 82 ~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~ap~vitVga~~~~~~~~~~~~~~~~~~~~g~~~ 161 (557)
||||... ....++.+++++.++|++||+||||+|......+...+++|+||+...
T Consensus 122 ~S~G~~~----~~~~~~~ai~~a~~~gv~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~--------------------- 176 (269)
T 1gci_A 122 LSLGSPS----PSATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQ--------------------- 176 (269)
T ss_dssp ECCCBSS----CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECT---------------------
T ss_pred eCCCCCC----CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCcCCccCCCeEEEEeecC---------------------
Confidence 9999832 246788888999999999999999999776566666789999997321
Q ss_pred ccCCCCceeeeEeecccccCCcCCCCCCCcCCCCCCCCCccceEEEEeeCCccchhhhHHHhhcCceEEEEEeCCCCCCc
Q 008679 162 TPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNE 241 (557)
Q Consensus 162 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~ 241 (557)
T Consensus 177 -------------------------------------------------------------------------------- 176 (269)
T 1gci_A 177 -------------------------------------------------------------------------------- 176 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcCCeeeecCCcEEec
Q 008679 242 YSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDITAPGLNILAA 321 (557)
Q Consensus 242 ~~~~~~~ip~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa 321 (557)
.+.++.||++||. |||+|||++|+++
T Consensus 177 ----------------------------------------------~~~~~~~S~~G~~--------~di~APG~~i~s~ 202 (269)
T 1gci_A 177 ----------------------------------------------NNNRASFSQYGAG--------LDIVAPGVNVQST 202 (269)
T ss_dssp ----------------------------------------------TSCBCTTCCCSTT--------EEEEEECSSEEEE
T ss_pred ----------------------------------------------CCCCCCCCCCCCC--------cceEecCCCeEee
Confidence 2567899999985 4999999999999
Q ss_pred ccCCCCCCccccCccccceeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHccccccCCCCCcccCCCCCCCCCC
Q 008679 322 WSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNNKALPITNADGSIATPF 401 (557)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~ 401 (557)
++. +.|..++|||||||||||++|||+|++|+|++.|||++|++||+++. ++.
T Consensus 203 ~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~~t~~~v~~~L~~tA~~~g--------------~~~ 255 (269)
T 1gci_A 203 YPG-------------STYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATSLG--------------STN 255 (269)
T ss_dssp ETT-------------TEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTSBCCS--------------CHH
T ss_pred cCC-------------CCEEEcCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC--------------CCC
Confidence 876 68999999999999999999999999999999999999999999763 356
Q ss_pred eeeccccCccCcCC
Q 008679 402 SFGSGHFRPTKAAD 415 (557)
Q Consensus 402 ~~G~G~vn~~~A~~ 415 (557)
.||+|+||+.+|++
T Consensus 256 ~~G~G~vn~~~A~~ 269 (269)
T 1gci_A 256 LYGSGLVNAEAATR 269 (269)
T ss_dssp HHTTCBCCHHHHTC
T ss_pred CcccCccCHHHHcC
Confidence 79999999999985
No 8
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00 E-value=1.5e-44 Score=374.93 Aligned_cols=227 Identities=22% Similarity=0.274 Sum_probs=153.0
Q ss_pred CCCchhhHHhhccCCCCCCCccCCCCCceeeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHHCCCcEEE
Q 008679 2 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDGVHVLS 81 (557)
Q Consensus 2 ~GHGThVAgiiAG~~~~~~~~~~g~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~A~~~gvdVIn 81 (557)
+||||||||||||+. +..+.||||+|+|+.+|++....... ...+...+++++|++|++.|++|||
T Consensus 107 ~gHGThVAGiiag~~-----------~~g~~GvAp~a~l~~~k~~~~~~~~~---~~~~~~~~~~~ai~~a~~~g~~Vin 172 (357)
T 4h6x_A 107 NDHACHVTSTIVGQE-----------HSPVFGIAPNCRVINMPQDAVIRGNY---DDVMSPLNLARAIDLALELGANIIH 172 (357)
T ss_dssp HHHHHHHHHHHHCCT-----------TSSCCCSCTTSEEEEEECTTC-------------CHHHHHHHHHHHHTTCSEEE
T ss_pred CCcHHHHHHHHhccC-----------CCCceEeeccceEEeeeecccCCCCc---cccccHHHHHHHHHHHHHcCCCEEe
Confidence 479999999999872 12358999999999999975432100 0023455689999999999999999
Q ss_pred EecCCCCCCCCCcchHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCCCceEEecccccCcceeeeEEeCCCcEEEeeee
Q 008679 82 ISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNLAPWLITVGAGSLDRDFVGPVVLGTGMEIIGKTV 161 (557)
Q Consensus 82 ~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~ap~vitVga~~~~~~~~~~~~~~~~~~~~g~~~ 161 (557)
||||.........+.+..++.++.++|++||+||||+|......+...|++|+|||...
T Consensus 173 ~S~G~~~~~~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~--------------------- 231 (357)
T 4h6x_A 173 CAFCRPTQTSEGEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGAAKV--------------------- 231 (357)
T ss_dssp EC-----------CHHHHHHHHHHHTTCEEEEECC---------------CEEEEEECT---------------------
T ss_pred eccccCCccccchhHHHHHHHHHhhCCeEEEecccCCCCCcCcCcccCCCCceEEEecc---------------------
Confidence 99998544455667888899999999999999999999776666666789999997321
Q ss_pred ccCCCCceeeeEeecccccCCcCCCCCCCcCCCCCCCCCccceEEEEeeCCccchhhhHHHhhcCceEEEEEeCCCCCCc
Q 008679 162 TPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNE 241 (557)
Q Consensus 162 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~ 241 (557)
T Consensus 232 -------------------------------------------------------------------------------- 231 (357)
T 4h6x_A 232 -------------------------------------------------------------------------------- 231 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcCCeeeecCCcEEec
Q 008679 242 YSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDITAPGLNILAA 321 (557)
Q Consensus 242 ~~~~~~~ip~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa 321 (557)
.+.+++||+||+. ..||||+|||++|+++
T Consensus 232 ----------------------------------------------~~~~~~fSn~G~~-----~~~~di~APG~~i~s~ 260 (357)
T 4h6x_A 232 ----------------------------------------------DGTPCHFSNWGGN-----NTKEGILAPGEEILGA 260 (357)
T ss_dssp ----------------------------------------------TSSBCTTCC---C-----TTTTEEEEECSSEEEC
T ss_pred ----------------------------------------------CCcccccccCCCC-----CCccceeecCCCeEec
Confidence 2567899999974 4599999999999999
Q ss_pred ccCCCCCCccccCccccceeeeccccchhhhHHHHHHHHHhh----CCCCCHHHHHHHHHccccccCCCCCcccCCCCCC
Q 008679 322 WSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAI----HPDWSSAAIRSALMTTAWMKNNKALPITNADGSI 397 (557)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~----~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~ 397 (557)
++.. +.|..++|||||||||||++|||+++ +|.|+++|||++|++||+++... ..
T Consensus 261 ~~~~------------~~~~~~sGTS~AaP~vaG~~All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~~---------~~ 319 (357)
T 4h6x_A 261 QPCT------------EEPVRLTGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKTAIPCDPE---------VV 319 (357)
T ss_dssp CTTC------------SCCEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC------------------
T ss_pred cCCC------------CcccccCcHHHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHhhCccCCCC---------CC
Confidence 8763 46778999999999999999999954 57899999999999999987532 12
Q ss_pred CCCCeeeccccCccCcCC
Q 008679 398 ATPFSFGSGHFRPTKAAD 415 (557)
Q Consensus 398 ~~~~~~G~G~vn~~~A~~ 415 (557)
..+.+||+|+||+.+|++
T Consensus 320 ~~~~~~G~G~vn~~~A~~ 337 (357)
T 4h6x_A 320 EEPERCLRGFVNIPGAMK 337 (357)
T ss_dssp -----CTTCBCCHHHHHH
T ss_pred CCcccceeEEecHHHHHH
Confidence 356789999999999987
No 9
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00 E-value=1.3e-43 Score=355.80 Aligned_cols=210 Identities=29% Similarity=0.351 Sum_probs=173.7
Q ss_pred CCCchhhHHhhccCCCCCCCccCCCCCceeeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHHCCCcEEE
Q 008679 2 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDGVHVLS 81 (557)
Q Consensus 2 ~GHGThVAgiiAG~~~~~~~~~~g~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~A~~~gvdVIn 81 (557)
+||||||||||+|... ....+.||||+|+|+.+|+++..+ .+..+++++||++|++.|++|||
T Consensus 70 ~gHGT~vAgiia~~~~---------~~~g~~GvAp~a~l~~~kv~~~~g--------~~~~~~i~~ai~~a~~~g~~Vin 132 (280)
T 1dbi_A 70 NNHGTHVAGIAAAETN---------NATGIAGMAPNTRILAVRALDRNG--------SGTLSDIADAIIYAADSGAEVIN 132 (280)
T ss_dssp SSHHHHHHHHHHCCCS---------SSSSCCCSSSSCEEEEEECCCTTS--------CCCHHHHHHHHHHHHHTTCSEEE
T ss_pred CCcHHHHHHHHhCcCC---------CCCcceEeCCCCEEEEEEEECCCC--------CcCHHHHHHHHHHHHHCCCCEEE
Confidence 6999999999998732 222357999999999999998765 37888999999999999999999
Q ss_pred EecCCCCCCCCCcchHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCCCceEEecccccCcceeeeEEeCCCcEEEeeee
Q 008679 82 ISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNLAPWLITVGAGSLDRDFVGPVVLGTGMEIIGKTV 161 (557)
Q Consensus 82 ~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~ap~vitVga~~~~~~~~~~~~~~~~~~~~g~~~ 161 (557)
||||.. .....++.+++++.++|++||+||||+|......+...+++|+||+...
T Consensus 133 ~S~G~~----~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~--------------------- 187 (280)
T 1dbi_A 133 LSLGCD----CHTTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVDQ--------------------- 187 (280)
T ss_dssp ECCSSC----CCCHHHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEECT---------------------
T ss_pred eCCCCC----CCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCCeEEEEeeCC---------------------
Confidence 999983 2346788888999999999999999999765555666789999997321
Q ss_pred ccCCCCceeeeEeecccccCCcCCCCCCCcCCCCCCCCCccceEEEEeeCCccchhhhHHHhhcCceEEEEEeCCCCCCc
Q 008679 162 TPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNE 241 (557)
Q Consensus 162 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~ 241 (557)
T Consensus 188 -------------------------------------------------------------------------------- 187 (280)
T 1dbi_A 188 -------------------------------------------------------------------------------- 187 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcCCeeeecCCcEEec
Q 008679 242 YSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDITAPGLNILAA 321 (557)
Q Consensus 242 ~~~~~~~ip~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa 321 (557)
.+.++.||++||. |||+|||++|+++
T Consensus 188 ----------------------------------------------~~~~~~~S~~G~~--------~dv~ApG~~i~s~ 213 (280)
T 1dbi_A 188 ----------------------------------------------YDRLASFSNYGTW--------VDVVAPGVDIVST 213 (280)
T ss_dssp ----------------------------------------------TSCBCTTBCCSTT--------CCEEEECSSEEEE
T ss_pred ----------------------------------------------CCCcCCCCCCCCC--------ceEEEecCCeEee
Confidence 2567899999974 4999999999999
Q ss_pred ccCCCCCCccccCccccceeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHccccccCCCCCcccCCCCCCCCCC
Q 008679 322 WSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNNKALPITNADGSIATPF 401 (557)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~ 401 (557)
++. +.|..++|||||||||||++|||++ |++++.+||++|++||+++.. ...
T Consensus 214 ~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~--p~~t~~~v~~~L~~ta~~~~~-------------~~~ 265 (280)
T 1dbi_A 214 ITG-------------NRYAYMSGTSMASPHVAGLAALLAS--QGRNNIEIRQAIEQTADKISG-------------TGT 265 (280)
T ss_dssp ETT-------------TEEEEECSHHHHHHHHHHHHHHHHH--TTCCHHHHHHHHHHTSBCCTT-------------BTT
T ss_pred cCC-------------CCEEEccCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHhCccCCC-------------CCC
Confidence 876 6899999999999999999999987 899999999999999998753 235
Q ss_pred eeeccccCccCcCC
Q 008679 402 SFGSGHFRPTKAAD 415 (557)
Q Consensus 402 ~~G~G~vn~~~A~~ 415 (557)
.+|+|+||+.+|++
T Consensus 266 ~~G~G~vn~~~A~~ 279 (280)
T 1dbi_A 266 YFKYGRINSYNAVT 279 (280)
T ss_dssp TBSSEECCHHHHHT
T ss_pred cccCCEECHHHHhc
Confidence 69999999999986
No 10
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00 E-value=1.1e-43 Score=355.30 Aligned_cols=210 Identities=30% Similarity=0.439 Sum_probs=178.8
Q ss_pred CCCchhhHHhhccCCCCCCCccCCCCCceeeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHHCCCcEEE
Q 008679 2 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDGVHVLS 81 (557)
Q Consensus 2 ~GHGThVAgiiAG~~~~~~~~~~g~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~A~~~gvdVIn 81 (557)
+||||||||||+|.. ....+.||||+|+|+.+|+++..+ .+..++++++|++|++++++|||
T Consensus 61 ~gHGT~vAgiia~~~----------~~~g~~GvAp~a~l~~~~v~~~~g--------~~~~~~i~~ai~~a~~~~~~Vin 122 (274)
T 1r0r_E 61 NGHGTHVAGTVAALD----------NTTGVLGVAPSVSLYAVKVLNSSG--------SGSYSGIVSGIEWATTNGMDVIN 122 (274)
T ss_dssp SSHHHHHHHHHHCCS----------SSSBCCCSSTTSEEEEEECSCTTS--------EECHHHHHHHHHHHHHTTCSEEE
T ss_pred CCCHHHHHHHHHccC----------CCCceEEECCCCEEEEEEEECCCC--------CccHHHHHHHHHHHHHcCCCEEE
Confidence 699999999999862 111257999999999999998765 37788999999999999999999
Q ss_pred EecCCCCCCCCCcchHHHHHHHHHhCCcEEEEecCCCCCCC----CCCCCCCCceEEecccccCcceeeeEEeCCCcEEE
Q 008679 82 ISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAP----SSLSNLAPWLITVGAGSLDRDFVGPVVLGTGMEII 157 (557)
Q Consensus 82 ~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~----~~~~~~ap~vitVga~~~~~~~~~~~~~~~~~~~~ 157 (557)
||||... ....+..+++++.++|++||+||||+|... ...+...+++|+||+...
T Consensus 123 ~S~G~~~----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~----------------- 181 (274)
T 1r0r_E 123 MSLGGAS----GSTAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVDS----------------- 181 (274)
T ss_dssp ECEEBSS----CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEECT-----------------
T ss_pred eCCCCCC----CcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEecC-----------------
Confidence 9999832 346788888999999999999999999752 223344588899987321
Q ss_pred eeeeccCCCCceeeeEeecccccCCcCCCCCCCcCCCCCCCCCccceEEEEeeCCccchhhhHHHhhcCceEEEEEeCCC
Q 008679 158 GKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPA 237 (557)
Q Consensus 158 g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~gvi~~n~~~ 237 (557)
T Consensus 182 -------------------------------------------------------------------------------- 181 (274)
T 1r0r_E 182 -------------------------------------------------------------------------------- 181 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcCCeeeecCCc
Q 008679 238 NGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDITAPGLN 317 (557)
Q Consensus 238 ~~~~~~~~~~~ip~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~ 317 (557)
.+.++.||++||. |||+|||.+
T Consensus 182 --------------------------------------------------~~~~~~~S~~G~~--------~di~APG~~ 203 (274)
T 1r0r_E 182 --------------------------------------------------NSNRASFSSVGAE--------LEVMAPGAG 203 (274)
T ss_dssp --------------------------------------------------TSCBCTTCCCSTT--------EEEEEECSS
T ss_pred --------------------------------------------------CCCcCccCCCCCC--------ceEEeCCCC
Confidence 2567899999984 599999999
Q ss_pred EEecccCCCCCCccccCccccceeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHccccccCCCCCcccCCCCCC
Q 008679 318 ILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNNKALPITNADGSI 397 (557)
Q Consensus 318 I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~ 397 (557)
|+++++. +.|..++|||||||||||++|||+|++|+|++++||++|++||+++.
T Consensus 204 i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g------------- 257 (274)
T 1r0r_E 204 VYSTYPT-------------NTYATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATYLG------------- 257 (274)
T ss_dssp EEEEETT-------------TEEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCCS-------------
T ss_pred eEeecCC-------------CCEEEeccHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcccC-------------
Confidence 9999876 68999999999999999999999999999999999999999999763
Q ss_pred CCCCeeeccccCccCcCC
Q 008679 398 ATPFSFGSGHFRPTKAAD 415 (557)
Q Consensus 398 ~~~~~~G~G~vn~~~A~~ 415 (557)
++..||+|+||+.+|++
T Consensus 258 -~~~~~G~G~~~~~~A~~ 274 (274)
T 1r0r_E 258 -SSFYYGKGLINVEAAAQ 274 (274)
T ss_dssp -CHHHHTTCBCCHHHHTC
T ss_pred -CCCCcccCccCHHHHhC
Confidence 35689999999999985
No 11
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00 E-value=3.7e-44 Score=360.67 Aligned_cols=222 Identities=24% Similarity=0.289 Sum_probs=183.0
Q ss_pred CCCchhhHHhhccCCCCCCCccCCCCCceeeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHHCCCcEEE
Q 008679 2 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDGVHVLS 81 (557)
Q Consensus 2 ~GHGThVAgiiAG~~~~~~~~~~g~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~A~~~gvdVIn 81 (557)
+||||||||||+|+.. ..+.||||+|+|+.+|++.+... .....+++++|+||++.+++|||
T Consensus 49 ~gHGT~VAGiiag~~~-----------~~~~GvAp~a~l~~~kv~~~~~~-------~~~~~~i~~ai~~a~~~~~~Vin 110 (282)
T 3zxy_A 49 SAHGTHVASIIFGQPE-----------TSVPGIAPQCRGLIVPIFSDDRR-------RITQLDLARGIERAVNAGAHIIN 110 (282)
T ss_dssp HHHHHHHHHHHHCCTT-----------SSSCCSSTTSEEEEEECSCSSSS-------CCCHHHHHHHHHHHHHTTCSEEE
T ss_pred CCcccceeehhhccCC-----------ceeeeeccccceEeeEeeccccc-------cchHHHHHHHHHHhhccCCeEEe
Confidence 3799999999998721 13579999999999999866542 46788899999999999999999
Q ss_pred EecCCCCCCCCCcchHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCCCceEEecccccCcceeeeEEeCCCcEEEeeee
Q 008679 82 ISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNLAPWLITVGAGSLDRDFVGPVVLGTGMEIIGKTV 161 (557)
Q Consensus 82 ~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~ap~vitVga~~~~~~~~~~~~~~~~~~~~g~~~ 161 (557)
||||...........+..++..+.++|+++|+||||+|......+...+++|+|||...
T Consensus 111 ~S~G~~~~~~~~~~~~~~ai~~a~~~gi~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~--------------------- 169 (282)
T 3zxy_A 111 ISGGELTDFGEADGWLENAVSLCRQNNVLLVAAAGNNGCDCLHVPAALPAVLAVGAMDD--------------------- 169 (282)
T ss_dssp ECCCEEESSSCCCHHHHHHHHHHHHTTCEEEEECCSSCSSCEEETTTSTTCEEEEEECT---------------------
T ss_pred ccCccccccccccHHHHHHHHHHhhcCceEEEecccCCCccccCccccceeEEEEEEcC---------------------
Confidence 99997433344556688888999999999999999999766666666789999997321
Q ss_pred ccCCCCceeeeEeecccccCCcCCCCCCCcCCCCCCCCCccceEEEEeeCCccchhhhHHHhhcCceEEEEEeCCCCCCc
Q 008679 162 TPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNE 241 (557)
Q Consensus 162 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~ 241 (557)
T Consensus 170 -------------------------------------------------------------------------------- 169 (282)
T 3zxy_A 170 -------------------------------------------------------------------------------- 169 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcCCeeeecCCcEEec
Q 008679 242 YSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDITAPGLNILAA 321 (557)
Q Consensus 242 ~~~~~~~ip~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa 321 (557)
.+.++.||+||+. ..||||.|||.+|+++
T Consensus 170 ----------------------------------------------~~~~~~~S~~~~~-----~~~~di~ApG~~i~s~ 198 (282)
T 3zxy_A 170 ----------------------------------------------HGHPLDFSNWGST-----YEQQGILAPGEDILGA 198 (282)
T ss_dssp ----------------------------------------------TSCBCSSSCCCHH-----HHHHEEEEECSSEEEE
T ss_pred ----------------------------------------------CCccccccCCCCC-----ccccceeccCcceeee
Confidence 2567789999873 5689999999999999
Q ss_pred ccCCCCCCccccCccccceeeeccccchhhhHHHHHHHHHhhC----CCCCHHHHHHHHHccccccCCCCCcccCCCCCC
Q 008679 322 WSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIH----PDWSSAAIRSALMTTAWMKNNKALPITNADGSI 397 (557)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~----p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~ 397 (557)
++. +.|..++|||||||||||++|||+|++ |.++|++||++|++||++++.. .+
T Consensus 199 ~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~vk~~L~~tA~~~~~~---------~~ 256 (282)
T 3zxy_A 199 KPG-------------GGTERLSGTAFATPIVSGVAALLLSEQVRRGETPDPQKVRQLLLQSALPCDDD---------AP 256 (282)
T ss_dssp CTT-------------SCEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHCBCC--------------
T ss_pred cCC-------------CceeecCCCcccchHHHHHHHHHHHHhHhhCCCCCHHHHHHHHHhhCeeCCCC---------CC
Confidence 887 689999999999999999999999874 7899999999999999987532 23
Q ss_pred CCCCeeeccccCccCcCC
Q 008679 398 ATPFSFGSGHFRPTKAAD 415 (557)
Q Consensus 398 ~~~~~~G~G~vn~~~A~~ 415 (557)
.....+|+|+||+.+|++
T Consensus 257 ~~~~~~G~G~ln~~~A~~ 274 (282)
T 3zxy_A 257 EQARRCLAGRLNVSGAFT 274 (282)
T ss_dssp --CGGGTTCBCCHHHHHH
T ss_pred CccCceeeeEeCHHHHHH
Confidence 456689999999999986
No 12
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00 E-value=3.3e-43 Score=353.05 Aligned_cols=211 Identities=33% Similarity=0.464 Sum_probs=179.8
Q ss_pred CCCchhhHHhhccCCCCCCCccCCCCCceeeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHHCCCcEEE
Q 008679 2 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDGVHVLS 81 (557)
Q Consensus 2 ~GHGThVAgiiAG~~~~~~~~~~g~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~A~~~gvdVIn 81 (557)
+||||||||||+|.. + ...+.||||+|+|+.+|+++..+ .+..++++++|++|++++++|||
T Consensus 62 ~gHGT~vAgiia~~~----~------~~g~~GvAp~a~l~~~kv~~~~g--------~~~~~~i~~ai~~a~~~~~~Vin 123 (281)
T 1to2_E 62 NSHGTHVAGTVAALN----N------SIGVLGVAPSASLYAVKVLGADG--------SGQYSWIINGIEWAIANNMDVIN 123 (281)
T ss_dssp SSHHHHHHHHHHCCS----S------SSSBCCSSTTSEEEEEECSCTTS--------EECHHHHHHHHHHHHHTTCSEEE
T ss_pred CCcHHHHHHHHhccC----C------CCcceeeCCCCEEEEEEEeCCCC--------CccHHHHHHHHHHHHHCCCcEEE
Confidence 699999999999862 1 11257999999999999998765 37788999999999999999999
Q ss_pred EecCCCCCCCCCcchHHHHHHHHHhCCcEEEEecCCCCCCC----CCCCCCCCceEEecccccCcceeeeEEeCCCcEEE
Q 008679 82 ISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAP----SSLSNLAPWLITVGAGSLDRDFVGPVVLGTGMEII 157 (557)
Q Consensus 82 ~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~----~~~~~~ap~vitVga~~~~~~~~~~~~~~~~~~~~ 157 (557)
||||... ....+..+++++.++|++||+||||+|... ...+...|++|+||+...
T Consensus 124 ~S~G~~~----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~----------------- 182 (281)
T 1to2_E 124 MSLGGPS----GSAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVDS----------------- 182 (281)
T ss_dssp ECEEBSC----CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEECT-----------------
T ss_pred ECCcCCC----CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEecC-----------------
Confidence 9999832 346788888999999999999999999752 223344588899987321
Q ss_pred eeeeccCCCCceeeeEeecccccCCcCCCCCCCcCCCCCCCCCccceEEEEeeCCccchhhhHHHhhcCceEEEEEeCCC
Q 008679 158 GKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPA 237 (557)
Q Consensus 158 g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~gvi~~n~~~ 237 (557)
T Consensus 183 -------------------------------------------------------------------------------- 182 (281)
T 1to2_E 183 -------------------------------------------------------------------------------- 182 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcCCeeeecCCc
Q 008679 238 NGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDITAPGLN 317 (557)
Q Consensus 238 ~~~~~~~~~~~ip~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~ 317 (557)
.+.++.||++||. |||+|||++
T Consensus 183 --------------------------------------------------~~~~~~fS~~G~~--------~di~APG~~ 204 (281)
T 1to2_E 183 --------------------------------------------------SNQRASFSSVGPE--------LDVMAPGVS 204 (281)
T ss_dssp --------------------------------------------------TSCBCTTCCCSTT--------CCEEEECSS
T ss_pred --------------------------------------------------CCCcCCcCCCCCC--------ceEEecCCC
Confidence 2567899999984 599999999
Q ss_pred EEecccCCCCCCccccCccccceeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHccccccCCCCCcccCCCCCC
Q 008679 318 ILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNNKALPITNADGSI 397 (557)
Q Consensus 318 I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~ 397 (557)
|+++++. +.|..++|||||||||||++|||+|++|+|++++||++|++||+++.
T Consensus 205 i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g------------- 258 (281)
T 1to2_E 205 IQSTLPG-------------NKYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLG------------- 258 (281)
T ss_dssp EEEEETT-------------TEEEEECBHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHTTCBCCS-------------
T ss_pred eEeecCC-------------CCEEecCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccC-------------
Confidence 9999876 68999999999999999999999999999999999999999999763
Q ss_pred CCCCeeeccccCccCcCCC
Q 008679 398 ATPFSFGSGHFRPTKAADP 416 (557)
Q Consensus 398 ~~~~~~G~G~vn~~~A~~~ 416 (557)
+++.||+|+||+.+|++.
T Consensus 259 -~~~~~G~G~v~~~~a~~~ 276 (281)
T 1to2_E 259 -DSFYYGKGLINVQAAAQH 276 (281)
T ss_dssp -CHHHHTTCBCCHHHHTSS
T ss_pred -CCCCcccceecHHHHhhh
Confidence 457899999999999985
No 13
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00 E-value=7.6e-43 Score=350.16 Aligned_cols=210 Identities=27% Similarity=0.352 Sum_probs=179.6
Q ss_pred CCCchhhHHhhccCCCCCCCccCCCCCceeeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHHCCCcEEE
Q 008679 2 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDGVHVLS 81 (557)
Q Consensus 2 ~GHGThVAgiiAG~~~~~~~~~~g~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~A~~~gvdVIn 81 (557)
+||||||||||+|... ....+.||||+|+|+.+|+++..+ .+...++++||++|+++|++|||
T Consensus 69 ~gHGT~vAgiia~~~~---------n~~g~~GvAp~a~l~~~~v~~~~g--------~~~~~~~~~ai~~a~~~g~~Vin 131 (279)
T 1thm_A 69 NGHGTHCAGIAAAVTN---------NSTGIAGTAPKASILAVRVLDNSG--------SGTWTAVANGITYAADQGAKVIS 131 (279)
T ss_dssp SSHHHHHHHHHHCCCS---------SSSSCCCSSTTCEEEEEECSCTTS--------CCCHHHHHHHHHHHHHTTCSEEE
T ss_pred CCcHHHHHHHHhCccC---------CCCccEEeCCCCEEEEEEeeCCCC--------CccHHHHHHHHHHHHHCCCCEEE
Confidence 6899999999998732 222357999999999999998765 37788999999999999999999
Q ss_pred EecCCCCCCCCCcchHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCCCceEEecccccCcceeeeEEeCCCcEEEeeee
Q 008679 82 ISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNLAPWLITVGAGSLDRDFVGPVVLGTGMEIIGKTV 161 (557)
Q Consensus 82 ~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~ap~vitVga~~~~~~~~~~~~~~~~~~~~g~~~ 161 (557)
||||.. .....+..+++++.++|++||+||||+|......+...+++|+||+...
T Consensus 132 ~S~G~~----~~~~~l~~ai~~a~~~gvlvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~--------------------- 186 (279)
T 1thm_A 132 LSLGGT----VGNSGLQQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTDQ--------------------- 186 (279)
T ss_dssp ECCCBS----SCCHHHHHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEECT---------------------
T ss_pred EecCCC----CCCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEEeCC---------------------
Confidence 999983 2346788888999999999999999999766666666789999997321
Q ss_pred ccCCCCceeeeEeecccccCCcCCCCCCCcCCCCCCCCCccceEEEEeeCCccchhhhHHHhhcCceEEEEEeCCCCCCc
Q 008679 162 TPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNE 241 (557)
Q Consensus 162 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~ 241 (557)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 1thm_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcCCeeeecCCcEEec
Q 008679 242 YSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDITAPGLNILAA 321 (557)
Q Consensus 242 ~~~~~~~ip~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa 321 (557)
.+.++.||++||. |||+|||++|+++
T Consensus 187 ----------------------------------------------~~~~~~fS~~G~~--------~dv~APG~~i~s~ 212 (279)
T 1thm_A 187 ----------------------------------------------NDNKSSFSTYGSW--------VDVAAPGSSIYST 212 (279)
T ss_dssp ----------------------------------------------TSCBCTTCCCCTT--------CCEEEECSSEEEE
T ss_pred ----------------------------------------------CCCcCCcCCCCCc--------eEEEEcCCCeEEE
Confidence 2567799999975 4999999999999
Q ss_pred ccCCCCCCccccCccccceeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHccccccCCCCCcccCCCCCCCCCC
Q 008679 322 WSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNNKALPITNADGSIATPF 401 (557)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~ 401 (557)
++. +.|..++|||||||||||++||| ++|.+++++||++|++||+++... ..
T Consensus 213 ~~~-------------~~~~~~sGTS~AaP~VaG~aAll--~~p~~t~~~v~~~L~~ta~~~~~~-------------~~ 264 (279)
T 1thm_A 213 YPT-------------STYASLSGTSMATPHVAGVAGLL--ASQGRSASNIRAAIENTADKISGT-------------GT 264 (279)
T ss_dssp ETT-------------TEEEEECSHHHHHHHHHHHHHHH--HTTTCCHHHHHHHHHHTCBCCTTB-------------TT
T ss_pred eCC-------------CCEEEcccHHHHHHHHHHHHHHH--HCCCcCHHHHHHHHHHhCccCCCC-------------Cc
Confidence 876 68999999999999999999999 579999999999999999987542 24
Q ss_pred eeeccccCccCcCC
Q 008679 402 SFGSGHFRPTKAAD 415 (557)
Q Consensus 402 ~~G~G~vn~~~A~~ 415 (557)
.||+|+||+.+|++
T Consensus 265 ~~G~G~vn~~~A~~ 278 (279)
T 1thm_A 265 YWAKGRVNAYKAVQ 278 (279)
T ss_dssp TBSSEECCHHHHHH
T ss_pred cccCCeeCHHHHhc
Confidence 68999999999875
No 14
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00 E-value=2.3e-43 Score=371.11 Aligned_cols=213 Identities=28% Similarity=0.391 Sum_probs=182.3
Q ss_pred CCCCchhhHHhhccCCCCCCCccCCCCCceeeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHHC-----
Q 008679 1 MDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRD----- 75 (557)
Q Consensus 1 ~~GHGThVAgiiAG~~~~~~~~~~g~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~A~~~----- 75 (557)
++||||||||||+|.. . ...+.||||+|+|+.+|++++.+ .+..+++++||+||+++
T Consensus 147 ~~gHGT~vAgiia~~~-n---------~~g~~GvAp~a~l~~~kv~~~~g--------~~~~~~i~~ai~~a~~~~~~~~ 208 (395)
T 2z2z_A 147 QNGHGTHVIGTIAALN-N---------DIGVVGVAPGVQIYSVRVLDARG--------SGSYSDIAIGIEQAILGPDGVA 208 (395)
T ss_dssp SSSHHHHHHHHHHCCC-S---------SSSCCCSSTTCEEEEEECSCTTS--------EEEHHHHHHHHHHHHHTTTTCS
T ss_pred CCCCHHHHHHHHHeec-C---------CCceEEECCCCEEEEEEEecCCC--------CccHHHHHHHHHHHHhCccccc
Confidence 3699999999999872 1 11247999999999999998766 37788999999999998
Q ss_pred ---------------CCcEEEEecCCCCCCCCCcchHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCCCceEEeccccc
Q 008679 76 ---------------GVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNLAPWLITVGAGSL 140 (557)
Q Consensus 76 ---------------gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~ap~vitVga~~~ 140 (557)
+++|||||||... ....+..++.++.++|++||+||||+|......+...|++|+|||...
T Consensus 209 ~~~~~~~~~~~~~~~~~~Vin~S~G~~~----~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~ 284 (395)
T 2z2z_A 209 DKDGDGIIAGDPDDDAAEVISMSLGGPA----DDSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAIDS 284 (395)
T ss_dssp STTCSSCCTTCTTSCCCSEEEECEEBSC----CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECT
T ss_pred cccccccccccccCCCCeEEEecCCCCC----CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccCCCCEEEEEEecC
Confidence 9999999999832 245678888899999999999999999876666667799999997421
Q ss_pred CcceeeeEEeCCCcEEEeeeeccCCCCceeeeEeecccccCCcCCCCCCCcCCCCCCCCCccceEEEEeeCCccchhhhH
Q 008679 141 DRDFVGPVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGM 220 (557)
Q Consensus 141 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~ 220 (557)
T Consensus 285 -------------------------------------------------------------------------------- 284 (395)
T 2z2z_A 285 -------------------------------------------------------------------------------- 284 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhcCceEEEEEeCCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCC
Q 008679 221 EVKRAGGVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPN 300 (557)
Q Consensus 221 ~~~~~Ga~gvi~~n~~~~~~~~~~~~~~ip~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~ 300 (557)
.+.+++||+|||
T Consensus 285 -------------------------------------------------------------------~~~~a~fS~~G~- 296 (395)
T 2z2z_A 285 -------------------------------------------------------------------NDNIASFSNRQP- 296 (395)
T ss_dssp -------------------------------------------------------------------TSCBCTTSCSSC-
T ss_pred -------------------------------------------------------------------CCCCCcccCCCC-
Confidence 256789999998
Q ss_pred CCCCCCcCCeeeecCCcEEecccCCCCCCccccCccccceeeeccccchhhhHHHHHHHHHhhCC-------------CC
Q 008679 301 ALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHP-------------DW 367 (557)
Q Consensus 301 ~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p-------------~~ 367 (557)
+|+|||++|+++++. +.|..++|||||||||||++|||+|++| +|
T Consensus 297 ---------~v~APG~~i~s~~~~-------------~~y~~~sGTS~AaP~VaG~aAll~~~~p~~~~~~~~~~~~~~l 354 (395)
T 2z2z_A 297 ---------EVSAPGVDILSTYPD-------------DSYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDI 354 (395)
T ss_dssp ---------SEEEECSSEEEEETT-------------TEEEEEESHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTCC
T ss_pred ---------CEEeCCCCeeeecCC-------------CceEecCCHHHHHHHHHHHHHHHHHhCccccccccccccccCC
Confidence 679999999999986 6899999999999999999999999999 99
Q ss_pred CHHHHHHHHHccccccCCCCCcccCCCCCCCCCCeeeccccCccCcCCC
Q 008679 368 SSAAIRSALMTTAWMKNNKALPITNADGSIATPFSFGSGHFRPTKAADP 416 (557)
Q Consensus 368 s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~A~~~ 416 (557)
++.+||++|++||+++... ..+..||+|+||+.+|++.
T Consensus 355 s~~~v~~~L~~tA~~~~~~-----------g~~~~~G~G~vd~~~A~~~ 392 (395)
T 2z2z_A 355 SKNTVRGILHITADDLGPT-----------GWDADYGYGVVRAALAVQA 392 (395)
T ss_dssp SSSSHHHHHHHHSBCCSSS-----------SSBTTTBTCBCCHHHHHHH
T ss_pred CHHHHHHHHHhhccccCCC-----------CCCCCccCceeCHHHHHHH
Confidence 9999999999999987532 2357899999999999874
No 15
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00 E-value=2e-42 Score=354.63 Aligned_cols=212 Identities=29% Similarity=0.376 Sum_probs=174.9
Q ss_pred CCCchhhHHhhccCCCCCCCccCCCCCceeeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHH------C
Q 008679 2 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIR------D 75 (557)
Q Consensus 2 ~GHGThVAgiiAG~~~~~~~~~~g~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~A~~------~ 75 (557)
+||||||||||+|.. + ...+.||||+|+|+.+|+++..+ .+..+++++||++|++ .
T Consensus 84 ~gHGT~VAgiia~~~---------~-~~g~~GvAp~a~l~~~kv~~~~g--------~~~~~~i~~ai~~a~~~~~~~~~ 145 (327)
T 2x8j_A 84 NGHGTHVAGTVAAAE---------T-GSGVVGVAPKADLFIIKALSGDG--------SGEMGWIAKAIRYAVDWRGPKGE 145 (327)
T ss_dssp SSHHHHHHHHHHCCC---------C-SSBCCCSSTTCEEEEEECSCTTS--------EECHHHHHHHHHHHHHCCCTTSC
T ss_pred CCchHHHHHHHhccC---------C-CCCcEeeCCCCEEEEEEeECCCC--------CcCHHHHHHHHHHHHhhcccccC
Confidence 599999999999872 1 12358999999999999998765 3778899999999999 8
Q ss_pred CCcEEEEecCCCCCCCCCcchHHHHHHHHHhCCcEEEEecCCCCCCC-----CCCCCCCCceEEecccccCcceeeeEEe
Q 008679 76 GVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAP-----SSLSNLAPWLITVGAGSLDRDFVGPVVL 150 (557)
Q Consensus 76 gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~-----~~~~~~ap~vitVga~~~~~~~~~~~~~ 150 (557)
+++|||||||... ....+..+++++.++|++||+||||+|... ...+...+++|+|||...
T Consensus 146 ~~~Vin~S~G~~~----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~vi~Vga~~~---------- 211 (327)
T 2x8j_A 146 QMRIITMSLGGPT----DSEELHDAVKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEVIAVGAVDF---------- 211 (327)
T ss_dssp CCSEEEECEEBSC----CCHHHHHHHHHHHHTTCEEEEECCCT---------TCBTTTSTTSEEEEEECT----------
T ss_pred CceEEEECCCcCC----CCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCEEEEEEECC----------
Confidence 9999999999832 346678888899999999999999999652 233344589999997421
Q ss_pred CCCcEEEeeeeccCCCCceeeeEeecccccCCcCCCCCCCcCCCCCCCCCccceEEEEeeCCccchhhhHHHhhcCceEE
Q 008679 151 GTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGL 230 (557)
Q Consensus 151 ~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~gv 230 (557)
T Consensus 212 -------------------------------------------------------------------------------- 211 (327)
T 2x8j_A 212 -------------------------------------------------------------------------------- 211 (327)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEeCCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcCCe
Q 008679 231 ILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPD 310 (557)
Q Consensus 231 i~~n~~~~~~~~~~~~~~ip~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPD 310 (557)
.+.++.||++|| |||
T Consensus 212 ---------------------------------------------------------~~~~~~fS~~G~--------~~d 226 (327)
T 2x8j_A 212 ---------------------------------------------------------DLRLSDFTNTNE--------EID 226 (327)
T ss_dssp ---------------------------------------------------------TCCBSCC---CC--------CCS
T ss_pred ---------------------------------------------------------CCCCCCccCCCC--------Cce
Confidence 256789999998 469
Q ss_pred eeecCCcEEecccCCCCCCccccCccccceeeeccccchhhhHHHHHHHHHhh-----CCCCCHHHHHHHHHccccccCC
Q 008679 311 ITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAI-----HPDWSSAAIRSALMTTAWMKNN 385 (557)
Q Consensus 311 I~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~-----~p~~s~~~ik~~L~~TA~~~~~ 385 (557)
|+|||++|+++++. +.|..++|||||||||||++|||+|+ +|.|++.+||++|++||+++.
T Consensus 227 i~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~p~ls~~~v~~~L~~tA~~~g- 292 (327)
T 2x8j_A 227 IVAPGVGIKSTYLD-------------SGYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSETEIYAQLVRRATPIG- 292 (327)
T ss_dssp EEEECSSEEEECST-------------TCEEEEESGGGTHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHTTEECCS-
T ss_pred EecCcCceEeecCC-------------CCEEeecCHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHHHHHHHhCccCC-
Confidence 99999999999876 68999999999999999999999999 999999999999999999763
Q ss_pred CCCcccCCCCCCCCCCeeeccccCccCcCCC
Q 008679 386 KALPITNADGSIATPFSFGSGHFRPTKAADP 416 (557)
Q Consensus 386 ~g~~~~~~~~~~~~~~~~G~G~vn~~~A~~~ 416 (557)
.++..+|+|+||+.+|++.
T Consensus 293 ------------~~~~~~G~G~vd~~~A~~~ 311 (327)
T 2x8j_A 293 ------------FTAQAEGNGFLTLDLVERI 311 (327)
T ss_dssp ------------SCHHHHTTCEECTTHHHHH
T ss_pred ------------CCCCceeeeEECHHHHHHh
Confidence 2467899999999999873
No 16
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00 E-value=2.2e-42 Score=380.42 Aligned_cols=243 Identities=24% Similarity=0.223 Sum_probs=189.8
Q ss_pred CCCchhhHHhhccCCCCCCCccCCCCCceeeeecCCCeEEEEEeecCC----CCCCccCCCCCCHHHHHHHHHHHHHCCC
Q 008679 2 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWAT----PKASKAAGNTCFEADMLAAIDDAIRDGV 77 (557)
Q Consensus 2 ~GHGThVAgiiAG~~~~~~~~~~g~~~~~~~GvAP~A~L~~~kv~~~~----~~~~~~~~~~~~~~~i~~ai~~A~~~gv 77 (557)
+||||||||||||.. + ...+.||||+|+|+.+|+++.. +. .....+.+++||+||+++|+
T Consensus 198 ~gHGThVAGiIAa~~---------n-g~gv~GVAP~A~I~~vkv~~~~~~~~g~------g~~s~~~i~~ai~~A~~~ga 261 (671)
T 1r6v_A 198 GSAGTHVAGTIAAKK---------D-GKGIVGVAPGAKIMPIVIFDDPALVGGN------GYVGDDYVAAGIIWATDHGA 261 (671)
T ss_dssp CSHHHHHHHHHHCCC---------S-SSSCCCSCTTSEEEEEESBCCHHHHCTT------SBCCHHHHHHHHHHHHHTTC
T ss_pred CCcchhhhhhhhccC---------C-CCceEEECCCCEEEEEEeccCccccCCC------CccCHHHHHHHHHHHHHcCC
Confidence 589999999999872 1 1125899999999999999761 10 02456779999999999999
Q ss_pred cEEEEecCCCCCCCCCcchHHHHHHHHHhCCcEEEEecCCCCCCC-CCCCCCCCceEEecccccCcceeeeEEeCCCcEE
Q 008679 78 HVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAP-SSLSNLAPWLITVGAGSLDRDFVGPVVLGTGMEI 156 (557)
Q Consensus 78 dVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~-~~~~~~ap~vitVga~~~~~~~~~~~~~~~~~~~ 156 (557)
+|||||||.. .....+..++++|.++|++||+||||+|... ...+...|++|+|||...+.
T Consensus 262 dVIN~SlG~~----~~s~~l~~Ai~~A~~~GvlvVaAAGN~g~~~~~~yPA~~~~VItVgA~d~~g-------------- 323 (671)
T 1r6v_A 262 KVMNHSWGGW----GYSYTMKEAFDYAMEHGVVMVVSAGNNTSDSHHQYPAGYPGVIQVAALDYYG-------------- 323 (671)
T ss_dssp SEEEECEEBS----CCCHHHHHHHHHHHHTTCEEEEECCSCSSSCCCCBTTTSTTCEEEEEEEEET--------------
T ss_pred CEEEeCCCCC----CCCHHHHHHHHHHHhCCCEEEEeCCCCCCCCCccCcccCCCeEEEEEEcCCC--------------
Confidence 9999999983 2346788889999999999999999999754 34445568999999843210
Q ss_pred EeeeeccCCCCceeeeEeecccccCCcCCCCCCCcCCCCCCCCCccceEEEEeeCCccchhhhHHHhhcCceEEEEEeCC
Q 008679 157 IGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSP 236 (557)
Q Consensus 157 ~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~gvi~~n~~ 236 (557)
T Consensus 324 -------------------------------------------------------------------------------- 323 (671)
T 1r6v_A 324 -------------------------------------------------------------------------------- 323 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcCCeeeecCC
Q 008679 237 ANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDITAPGL 316 (557)
Q Consensus 237 ~~~~~~~~~~~~ip~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~ 316 (557)
....+++||++||.. ||+|||+
T Consensus 324 --------------------------------------------------~~~~~a~fSn~G~~v--------dv~APG~ 345 (671)
T 1r6v_A 324 --------------------------------------------------GTFRVAGFSSRSDGV--------SVGAPGV 345 (671)
T ss_dssp --------------------------------------------------TEEEECSSSCCCTTE--------EEEEECS
T ss_pred --------------------------------------------------CceeeccccCCCCCe--------eEEecCC
Confidence 012477999999964 9999999
Q ss_pred cEEecccCCCCCCc-----cccCccccceeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHccccccCCCCCccc
Q 008679 317 NILAAWSEASSPSK-----LAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNNKALPIT 391 (557)
Q Consensus 317 ~I~sa~~~~~~~~~-----~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~ 391 (557)
+|+++++....... .......+.|..++|||||||||||++|||+|++|+|++.+||++|++||+++...
T Consensus 346 ~I~St~p~~~~~g~~~~~~~~~~~~~~~y~~~sGTSmAAP~VAGvaALl~s~~P~lt~~~Vr~~L~~TA~~~~~~----- 420 (671)
T 1r6v_A 346 TILSTVPGEDSIGYEGHNENVPATNGGTYDYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNGN----- 420 (671)
T ss_dssp SEEEECCCTTSTTCCCCCTTCCCSSSCCEEEEESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSSS-----
T ss_pred CEEeecCCCCccccccccccccccCCCceEEecCccHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcCCCCC-----
Confidence 99999876321100 00011235799999999999999999999999999999999999999999987542
Q ss_pred CCCCCCCCCCeeeccccCccCcCCCCceeeccchhh
Q 008679 392 NADGSIATPFSFGSGHFRPTKAADPGLVYDASYEDY 427 (557)
Q Consensus 392 ~~~~~~~~~~~~G~G~vn~~~A~~~~lv~~~~~~~~ 427 (557)
..+..+|+|+||+.+|++..|..+....+|
T Consensus 421 ------g~d~~~G~G~vna~~Al~~~l~~~~~~~~~ 450 (671)
T 1r6v_A 421 ------GWDHDTGYGLVKLDAALQGPLPTQGGVEEF 450 (671)
T ss_dssp ------SCBTTTBTCBCCHHHHHHCCCCSSSEEEEE
T ss_pred ------CCCCCcccceeCHHHHhhhhcCCCCCccce
Confidence 235679999999999999877766555444
No 17
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00 E-value=8.7e-42 Score=348.11 Aligned_cols=228 Identities=29% Similarity=0.372 Sum_probs=183.5
Q ss_pred CCCchhhHHhhccCCCCCCCccCCCCCceeeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHHCCC----
Q 008679 2 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDGV---- 77 (557)
Q Consensus 2 ~GHGThVAgiiAG~~~~~~~~~~g~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~A~~~gv---- 77 (557)
+||||||||||+|... .....+.||||+|+|+.+|+++..+ .+..++++++|++|+++++
T Consensus 69 ~gHGT~vAgiia~~~~--------~n~~g~~GvAp~a~l~~~~v~~~~g--------~~~~~~~~~ai~~a~~~~~~~~~ 132 (310)
T 2ixt_A 69 NGHGTHVAGTALADGG--------SDQAGIYGVAPDADLWAYKVLLDSG--------SGYSDDIAAAIRHAADQATATGT 132 (310)
T ss_dssp SSHHHHHHHHHHCBCC--------TTSCSCBCSCTTSEEEEEECSCTTS--------CCCHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHhccCC--------CCCCceEEECCCCEEEEEEEEcCCC--------CCcHHHHHHHHHHHHHhhhccCC
Confidence 5999999999998731 2223458999999999999998765 3788899999999999888
Q ss_pred -cEEEEecCCCCCCCCCcchHHHHHHHHHhCCcEEEEecCCCCCCCCCC--CCCCCceEEecccccCcceeeeEEeCCCc
Q 008679 78 -HVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSL--SNLAPWLITVGAGSLDRDFVGPVVLGTGM 154 (557)
Q Consensus 78 -dVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~--~~~ap~vitVga~~~~~~~~~~~~~~~~~ 154 (557)
+|||||||... ....+..+++++.++|++||+||||+|...... +...+++|+||+.....
T Consensus 133 ~~Vin~S~G~~~----~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vga~~~~~------------ 196 (310)
T 2ixt_A 133 KTIISMSLGSSA----NNSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALENVQ------------ 196 (310)
T ss_dssp CEEEEECCCBSS----CCHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEEEEEEE------------
T ss_pred CeEEEEcCCCCC----CCHHHHHHHHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEEeccccc------------
Confidence 99999999832 346778888899999999999999999764333 34458999999842100
Q ss_pred EEEeeeeccCCCCceeeeEeecccccCCcCCCCCCCcCCCCCCCCCccceEEEEeeCCccchhhhHHHhhcCceEEEEEe
Q 008679 155 EIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGN 234 (557)
Q Consensus 155 ~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~gvi~~n 234 (557)
T Consensus 197 -------------------------------------------------------------------------------- 196 (310)
T 2ixt_A 197 -------------------------------------------------------------------------------- 196 (310)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEEeceEEeecCCCC--ccccccCCCCCCCC----CCCcC
Q 008679 235 SPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAP--FMANFTSRGPNALD----PYILK 308 (557)
Q Consensus 235 ~~~~~~~~~~~~~~ip~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~a~fSS~GP~~~~----~~~lK 308 (557)
..+ .++.||++||.... ....|
T Consensus 197 ----------------------------------------------------~~g~~~~~~~S~~G~~~~~g~~~~~~~~ 224 (310)
T 2ixt_A 197 ----------------------------------------------------QNGTYRVADYSSRGYISTAGDYVIQEGD 224 (310)
T ss_dssp ----------------------------------------------------ETTEEEECTTSCCCCTTTTTSSSCCTTC
T ss_pred ----------------------------------------------------cCCCeeeccccCCCCccCCccccccCCC
Confidence 012 56789999995421 12359
Q ss_pred CeeeecCCcEEecccCCCCCCccccCccccceeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHccccccCCCCC
Q 008679 309 PDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNNKAL 388 (557)
Q Consensus 309 PDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~ 388 (557)
|||+|||++|+++++. +.|..++|||||||||||++|||+|++|+|++++||++|++||++.+..+.
T Consensus 225 ~di~ApG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~~~ 291 (310)
T 2ixt_A 225 IEISAPGSSVYSTWYN-------------GGYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERAKSVDIKGG 291 (310)
T ss_dssp CCEEEECSSEEEECTT-------------SSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTSCCCBS
T ss_pred eeEECCCCCEeeecCC-------------CCEEeeccHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccCCCCC
Confidence 9999999999999876 689999999999999999999999999999999999999999998764321
Q ss_pred cccCCCCCCCCCCeeeccccCc
Q 008679 389 PITNADGSIATPFSFGSGHFRP 410 (557)
Q Consensus 389 ~~~~~~~~~~~~~~~G~G~vn~ 410 (557)
....+..+..+|+|++|+
T Consensus 292 ----~~a~~g~d~~~G~G~~~v 309 (310)
T 2ixt_A 292 ----YGAAIGDDYASGFGFARV 309 (310)
T ss_dssp ----TTCCSSSBTTTBTCBCCC
T ss_pred ----cccccCCccccccceeec
Confidence 112345678899999986
No 18
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00 E-value=2.2e-42 Score=372.55 Aligned_cols=215 Identities=26% Similarity=0.322 Sum_probs=180.4
Q ss_pred CCCchhhHHhhccCCCCCCCccCCCCCceeeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHHCCCcEEE
Q 008679 2 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDGVHVLS 81 (557)
Q Consensus 2 ~GHGThVAgiiAG~~~~~~~~~~g~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~A~~~gvdVIn 81 (557)
+||||||||||+|+ |. +.||||+|+|+.+|+++... +...++++||++|+++|++|||
T Consensus 199 ~gHGT~vAgiiaa~---------g~----~~GvAp~a~l~~~kv~~~~~---------~~~~~i~~ai~~a~~~g~~Vin 256 (471)
T 3t41_A 199 KGHGTMVSGQTSAN---------GK----LIGVAPNNKFTMYRVFGSKK---------TELLWVSKAIVQAANDGNQVIN 256 (471)
T ss_dssp SSHHHHHHHHHHCB---------SS----SBCSSTTSCEEEEECCSSSC---------CCHHHHHHHHHHHHHTTCSEEE
T ss_pred CCccchhhheeecC---------Cc----eeEECCCCeEEEEEeccCCC---------CcHHHHHHHHHHHHhCCCCEEE
Confidence 58999999999987 32 58999999999999998743 8899999999999999999999
Q ss_pred EecCCCCCCC------------CCcchHHHHHHHHHhCCcEEEEecCCCCCCCCC------------------CCCCCCc
Q 008679 82 ISIGTNQPFA------------FNRDGIAIGALNAVKHNILVACSAGNSGPAPSS------------------LSNLAPW 131 (557)
Q Consensus 82 ~SlG~~~~~~------------~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~------------------~~~~ap~ 131 (557)
||||...... ...+.+..+++.+.++|++||+||||+|..... .+...++
T Consensus 257 ~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~~~~~~~~~~~~~Pa~~~~ 336 (471)
T 3t41_A 257 ISVGSYIILDKNDHQTFRKDEKVEYDALQKAINYAKKKKSIVVAAAGNDGIDVNDKQKLKLQREYQGNGEVKDVPASMDN 336 (471)
T ss_dssp ECCCEEEEECTTCCCSEESSCHHHHHHHHHHHHHHHHTTCEEEEECCSSCCBTTCHHHHHHTTTCCSSSEEEEETTTSTT
T ss_pred eCCCCCCCCccccccccccccchhHHHHHHHHHHHHhCCCEEEEEcCCCCcCCCcccccccccccccCCceeeccccCCC
Confidence 9999732111 123567788888999999999999999975432 3344578
Q ss_pred eEEecccccCcceeeeEEeCCCcEEEeeeeccCCCCceeeeEeecccccCCcCCCCCCCcCCCCCCCCCccceEEEEeeC
Q 008679 132 LITVGAGSLDRDFVGPVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRG 211 (557)
Q Consensus 132 vitVga~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g 211 (557)
+|+|||++.
T Consensus 337 vitVgA~~~----------------------------------------------------------------------- 345 (471)
T 3t41_A 337 VVTVGSTDQ----------------------------------------------------------------------- 345 (471)
T ss_dssp EEEEEEECT-----------------------------------------------------------------------
T ss_pred eEEEEeeCC-----------------------------------------------------------------------
Confidence 888887321
Q ss_pred CccchhhhHHHhhcCceEEEEEeCCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEEeceEEeecCCCCcc
Q 008679 212 SGFKLSKGMEVKRAGGVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFM 291 (557)
Q Consensus 212 ~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~ip~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 291 (557)
.+.+
T Consensus 346 ----------------------------------------------------------------------------~~~~ 349 (471)
T 3t41_A 346 ----------------------------------------------------------------------------KSNL 349 (471)
T ss_dssp ----------------------------------------------------------------------------TSSB
T ss_pred ----------------------------------------------------------------------------CCCC
Confidence 2567
Q ss_pred ccccCCCCCCCCCCCcCCeeeecCCc----------------------EEecccCCCCCCccccCccccceeeeccccch
Q 008679 292 ANFTSRGPNALDPYILKPDITAPGLN----------------------ILAAWSEASSPSKLAFDKRIVKYTIFSGTSMS 349 (557)
Q Consensus 292 a~fSS~GP~~~~~~~lKPDI~APG~~----------------------I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMA 349 (557)
++||+|||+. |||+|||++ |+++++. +.|..++|||||
T Consensus 350 a~fS~~G~~~-------~di~APG~~i~~~~~~g~~~~~~~~~~~~~~i~s~~~~-------------~~~~~~sGTS~A 409 (471)
T 3t41_A 350 SEFSNFGMNY-------TDIAAPGGSFAYLNQFGVDKWMNEGYMHKENILTTANN-------------GRYIYQAGTALA 409 (471)
T ss_dssp CTTCCBCTTT-------CCEEEECCCCHHHHHHHHHHHHHTTTHHHHSEEEECTT-------------SSEEEECSHHHH
T ss_pred CCccCCCCCC-------CeEEecCCCcccccccccccccccccccCceeEecCCC-------------CCEEeecchHHH
Confidence 8999999964 599999987 8888876 689999999999
Q ss_pred hhhHHHHHHHHHhhCC-CCCHHHHHHHHHccccccCCCCCcccCCCCCCCCCCeeeccccCccCcCCCC
Q 008679 350 CPHVAAAAALLKAIHP-DWSSAAIRSALMTTAWMKNNKALPITNADGSIATPFSFGSGHFRPTKAADPG 417 (557)
Q Consensus 350 aP~VAG~aALl~q~~p-~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~A~~~~ 417 (557)
||||||++|||+|++| +|+|++||++|++||.+... .++..||+|+||+.+|++..
T Consensus 410 aP~VAG~aAll~~~~p~~~~~~~v~~~L~~tA~~~~~------------~~~~~~G~G~vd~~~Al~~a 466 (471)
T 3t41_A 410 TPKVSGALALIIDKYHLEKHPDKAIELLYQHGTSKNN------------KPFSRYGHGELDVYKALNVA 466 (471)
T ss_dssp HHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHSBCCSC------------CCHHHHTTCBBCHHHHTTTT
T ss_pred HHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCCC------------CCcCccccChhCHHHHHHHH
Confidence 9999999999999999 89999999999999987642 35678999999999999853
No 19
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00 E-value=1.1e-42 Score=354.12 Aligned_cols=222 Identities=25% Similarity=0.286 Sum_probs=185.2
Q ss_pred CCCchhhHHhhccCCCCCCCccCCCCCceeeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHHCCCcEEE
Q 008679 2 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDGVHVLS 81 (557)
Q Consensus 2 ~GHGThVAgiiAG~~~~~~~~~~g~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~A~~~gvdVIn 81 (557)
+||||||||||+|+. ++.+.||||+|+|+.+|++.+... .+....+++||+||++++++|||
T Consensus 62 ~gHGThVAGiiag~~-----------~~~~~GVAp~a~l~~~kv~~~~~~-------~~~~~~i~~ai~~a~~~g~~vi~ 123 (306)
T 4h6w_A 62 STHGTHVASIIFGQH-----------DSPVTGIAPQCRGLIVPVFADESL-------KLSQLDLSRAIEQAVNNGANIIN 123 (306)
T ss_dssp CHHHHHHHHHHHCCT-----------TSSSCCSSTTSEEEECCCCCSSSC-------CCCHHHHHHHHHHHHHTTCSEEE
T ss_pred CCchHHHHHHHHccc-----------cCCcceeccccccceeeccccccc-------cchHHHHHHHHHHhhcccceeee
Confidence 589999999999872 123589999999999999876542 47788899999999999999999
Q ss_pred EecCCCCCCCCCcchHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCCCceEEecccccCcceeeeEEeCCCcEEEeeee
Q 008679 82 ISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNLAPWLITVGAGSLDRDFVGPVVLGTGMEIIGKTV 161 (557)
Q Consensus 82 ~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~ap~vitVga~~~~~~~~~~~~~~~~~~~~g~~~ 161 (557)
+|||...........+..++.++.++|++||++|||+|......+...+++|+||+...
T Consensus 124 ~s~g~~~~~~~~~~~~~~ai~~a~~~gi~vvaaagn~g~~~~~~Pa~~~~vi~Vga~~~--------------------- 182 (306)
T 4h6w_A 124 VSAGQLTDAGEADTWLEKAIQLCQENNVLLIAATGNDGCECLHVPASLPTVLAVGAMDD--------------------- 182 (306)
T ss_dssp ECCCEEESSSCCCHHHHHHHHHHHHTTCEEEEECCSSSSBCEEETTTSTTCEEEEEECT---------------------
T ss_pred ccccccccCCCccHHHHHHHHHHHHcCCeEEEecCCCCcccccccccCCcceEEEEecC---------------------
Confidence 99997433344556788888999999999999999999765555556688999987321
Q ss_pred ccCCCCceeeeEeecccccCCcCCCCCCCcCCCCCCCCCccceEEEEeeCCccchhhhHHHhhcCceEEEEEeCCCCCCc
Q 008679 162 TPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNE 241 (557)
Q Consensus 162 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~ 241 (557)
T Consensus 183 -------------------------------------------------------------------------------- 182 (306)
T 4h6w_A 183 -------------------------------------------------------------------------------- 182 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcCCeeeecCCcEEec
Q 008679 242 YSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDITAPGLNILAA 321 (557)
Q Consensus 242 ~~~~~~~ip~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa 321 (557)
.+.+++||++|+ ...||||+|||++|+++
T Consensus 183 ----------------------------------------------~~~~~~~s~~g~-----~~~~~di~APG~~i~s~ 211 (306)
T 4h6w_A 183 ----------------------------------------------QGKPVDFSNWGD-----AYQKQGILAPGKDILGA 211 (306)
T ss_dssp ----------------------------------------------TSCBCSSSCBCH-----HHHHHEEEEECSSEEEE
T ss_pred ----------------------------------------------CCCccccccccC-----CcCcceeecCCcCcccc
Confidence 256678999997 35689999999999999
Q ss_pred ccCCCCCCccccCccccceeeeccccchhhhHHHHHHHHHhh----CCCCCHHHHHHHHHccccccCCCCCcccCCCCCC
Q 008679 322 WSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAI----HPDWSSAAIRSALMTTAWMKNNKALPITNADGSI 397 (557)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~----~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~ 397 (557)
++. +.|..++|||||||||||++|||+++ +|+|+|+|||++|++||+++...+ .
T Consensus 212 ~~~-------------~~~~~~sGTS~AaP~VaG~~All~s~~~~~~p~~t~~~v~~~L~~tA~~~~~~~---------~ 269 (306)
T 4h6w_A 212 KPN-------------GGTIRLSGTSFATPIVSGVAALLLSLQIKRGEKPDPQKVKNALLASATPCNPKD---------T 269 (306)
T ss_dssp CTT-------------SCEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCCTTT---------C
T ss_pred cCC-------------CceeccCCCcchhHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhhCccCCCCC---------C
Confidence 886 68999999999999999999999865 699999999999999999876432 2
Q ss_pred CCCCeeeccccCccCcCC
Q 008679 398 ATPFSFGSGHFRPTKAAD 415 (557)
Q Consensus 398 ~~~~~~G~G~vn~~~A~~ 415 (557)
.....||+|+||+.+|++
T Consensus 270 ~~~~~~G~G~ln~~~Av~ 287 (306)
T 4h6w_A 270 DDQSRCLMGKLNILDAIE 287 (306)
T ss_dssp SCGGGGTTCBCCHHHHHH
T ss_pred CCCCCcceeecCHHHHHH
Confidence 234579999999999987
No 20
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00 E-value=2.3e-42 Score=353.60 Aligned_cols=213 Identities=28% Similarity=0.397 Sum_probs=181.0
Q ss_pred CCCCchhhHHhhccCCCCCCCccCCCCCceeeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHHC-----
Q 008679 1 MDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRD----- 75 (557)
Q Consensus 1 ~~GHGThVAgiiAG~~~~~~~~~~g~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~A~~~----- 75 (557)
++||||||||||+|.. + ...+.||||+|+|+.+|+++..+ .+..++++++|++|++.
T Consensus 72 ~~gHGT~vAgiia~~~----n------~~g~~GvAp~a~l~~~~v~~~~g--------~~~~~~i~~ai~~a~~~~~~~~ 133 (320)
T 2z30_A 72 QNGHGTHVIGTIAALN----N------DIGVVGVAPGVQIYSVRVLDARG--------SGSYSDIAIGIEQAILGPDGVA 133 (320)
T ss_dssp SSSHHHHHHHHHHCCS----S------SBSCCCSSTTCEEEEEECSCTTS--------EEEHHHHHHHHHHHHHTTTTCS
T ss_pred CCCCHHHHHHHHHccc----C------CCceEeeCCCCEEEEEEeeCCCC--------CccHHHHHHHHHHHHhCccccc
Confidence 3699999999999861 1 11247999999999999998765 37788999999999987
Q ss_pred ---------------CCcEEEEecCCCCCCCCCcchHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCCCceEEeccccc
Q 008679 76 ---------------GVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNLAPWLITVGAGSL 140 (557)
Q Consensus 76 ---------------gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~ap~vitVga~~~ 140 (557)
+++|||||||... ....+..++.++.++|++||+||||+|......+...|++|+|||...
T Consensus 134 ~~~~~~~~~~~~~~~~~~Vin~S~G~~~----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~ 209 (320)
T 2z30_A 134 DKDGDGIIAGDPDDDAAEVISMSLGGPA----DDSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAIDS 209 (320)
T ss_dssp CTTSSSCCTTCTTSCCCSEEEECEEBSC----CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECT
T ss_pred ccccccccccccccCCceEEEecCCCCC----CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEeeCC
Confidence 9999999999832 346677888889999999999999999776666666799999997321
Q ss_pred CcceeeeEEeCCCcEEEeeeeccCCCCceeeeEeecccccCCcCCCCCCCcCCCCCCCCCccceEEEEeeCCccchhhhH
Q 008679 141 DRDFVGPVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGM 220 (557)
Q Consensus 141 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~ 220 (557)
T Consensus 210 -------------------------------------------------------------------------------- 209 (320)
T 2z30_A 210 -------------------------------------------------------------------------------- 209 (320)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhcCceEEEEEeCCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCC
Q 008679 221 EVKRAGGVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPN 300 (557)
Q Consensus 221 ~~~~~Ga~gvi~~n~~~~~~~~~~~~~~ip~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~ 300 (557)
.+.++.||+|||
T Consensus 210 -------------------------------------------------------------------~~~~~~~S~~g~- 221 (320)
T 2z30_A 210 -------------------------------------------------------------------NDNIASFSNRQP- 221 (320)
T ss_dssp -------------------------------------------------------------------TSCBCTTSCSSC-
T ss_pred -------------------------------------------------------------------CCCcCcccCCCC-
Confidence 256789999997
Q ss_pred CCCCCCcCCeeeecCCcEEecccCCCCCCccccCccccceeeeccccchhhhHHHHHHHHHhhC-------------CCC
Q 008679 301 ALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIH-------------PDW 367 (557)
Q Consensus 301 ~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~-------------p~~ 367 (557)
+|+|||++|+++++. +.|..++|||||||||||++|||+|++ |+|
T Consensus 222 ---------~v~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~~~p~l 279 (320)
T 2z30_A 222 ---------EVSAPGVDILSTYPD-------------DSYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDI 279 (320)
T ss_dssp ---------SEEEECSSEEEEETT-------------TEEEEECSHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTCC
T ss_pred ---------CEEeCCCCeEEeccC-------------CCeEeccCHHHHHHHHHHHHHHHHHhchhhcccccccccCCCC
Confidence 789999999999876 689999999999999999999999999 999
Q ss_pred CHHHHHHHHHccccccCCCCCcccCCCCCCCCCCeeeccccCccCcCCC
Q 008679 368 SSAAIRSALMTTAWMKNNKALPITNADGSIATPFSFGSGHFRPTKAADP 416 (557)
Q Consensus 368 s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~A~~~ 416 (557)
++.+||++|++||+++... ..+..+|+|+||+.+|++.
T Consensus 280 t~~~v~~~L~~ta~~~~~~-----------g~~~~~G~G~vd~~~A~~~ 317 (320)
T 2z30_A 280 SKNTVRGILHITADDLGPT-----------GWDADYGYGVVRAALAVQA 317 (320)
T ss_dssp STTSHHHHHHHHSBCCSSS-----------SSBTTTBTCBCCHHHHHHH
T ss_pred CHHHHHHHHHhhCccCCCC-----------CCCCCcCCceeCHHHHHHH
Confidence 9999999999999987432 2356799999999999863
No 21
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00 E-value=4.6e-42 Score=355.58 Aligned_cols=218 Identities=21% Similarity=0.128 Sum_probs=178.4
Q ss_pred CCCchhhHHhhccCCCCCCCccCCCCCceeeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHHC------
Q 008679 2 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRD------ 75 (557)
Q Consensus 2 ~GHGThVAgiiAG~~~~~~~~~~g~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~A~~~------ 75 (557)
+||||||||||+|+. | +.||||+|+|+.+|++++.+ .. ++++||++|+++
T Consensus 87 ~gHGT~vAgiia~~~--------g-----~~GvAp~a~l~~~~v~~~~~---------~~--~~~~ai~~a~~~~~~~~~ 142 (347)
T 2iy9_A 87 YIHGTAMASLIASRY--------G-----IYGVYPHALISSRRVIPDGV---------QD--SWIRAIESIMSNVFLAPG 142 (347)
T ss_dssp HHHHHHHHHHHHCSS--------S-----SCCSSTTCEEEEEECCSSBC---------TT--HHHHHHHHHHTCTTSCTT
T ss_pred CCcHHHHHHHHhccc--------C-----CcccCCCCEEEEEEEecCCC---------HH--HHHHHHHHHHhhhhcccC
Confidence 489999999999871 3 37999999999999997754 22 899999999999
Q ss_pred CCcEEEEecCCCCCCCCCcchHHHHHHHHHhCCcEEEEecCCCCCCC-------CCCCCCCC----------ceEEeccc
Q 008679 76 GVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAP-------SSLSNLAP----------WLITVGAG 138 (557)
Q Consensus 76 gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~-------~~~~~~ap----------~vitVga~ 138 (557)
|++|||||||... .......+..++..+.++|++||+||||+|... ...+...+ ++|+|||.
T Consensus 143 ~~~Vin~S~G~~~-~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~~~~~~~~~~~~vi~Vga~ 221 (347)
T 2iy9_A 143 EEKIINISGGQKG-VASASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVNKKQDPVIRVAAL 221 (347)
T ss_dssp EEEEEEESSCBCC-C-CCHHHHHHHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTTCCCCSHHHHHTCCEEEEEEE
T ss_pred CceEEEeccccCC-CCCcCHHHHHHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCcCccccccccccCCEEEEEEc
Confidence 9999999999732 234567788888999999999999999999753 23334456 88888875
Q ss_pred cc--CcceeeeEEeCCCcEEEeeeeccCCCCceeeeEeecccccCCcCCCCCCCcCCCCCCCCCccceEEEEeeCCccch
Q 008679 139 SL--DRDFVGPVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKL 216 (557)
Q Consensus 139 ~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~ 216 (557)
.. +...
T Consensus 222 ~~~~~g~~------------------------------------------------------------------------ 229 (347)
T 2iy9_A 222 AQYRKGET------------------------------------------------------------------------ 229 (347)
T ss_dssp CCCCTTSC------------------------------------------------------------------------
T ss_pred ccCCCCce------------------------------------------------------------------------
Confidence 32 0000
Q ss_pred hhhHHHhhcCceEEEEEeCCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccC
Q 008679 217 SKGMEVKRAGGVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTS 296 (557)
Q Consensus 217 ~k~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~ip~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS 296 (557)
......++.||+
T Consensus 230 --------------------------------------------------------------------~~~~~~~~~fS~ 241 (347)
T 2iy9_A 230 --------------------------------------------------------------------PVLHGGGITGSR 241 (347)
T ss_dssp --------------------------------------------------------------------CCBCCCSSSCBC
T ss_pred --------------------------------------------------------------------ecccCCCCCCCC
Confidence 000134569999
Q ss_pred CCCCCCCCCCcCCeeeecCCcEEecccCCCCCCccccCccccceeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHH
Q 008679 297 RGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSAL 376 (557)
Q Consensus 297 ~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~s~~~ik~~L 376 (557)
+||+ ||||+|||++|+++++. +.|..++|||||||||||++|||+|++|+|++.+||++|
T Consensus 242 ~G~~-------~~di~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~VaG~aAll~~~~p~lt~~~v~~~L 301 (347)
T 2iy9_A 242 FGNN-------WVDIAAPGQNITFLRPD-------------AKTGTGSGTSEATAIVSGVLAAMTSCNPRATATELKRTL 301 (347)
T ss_dssp BCTT-------TCSEEEECSSEEEECTT-------------SCEEEECSHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHH
T ss_pred CCCC-------CCEEEeCCCCeEeecCC-------------CCeEeccchHHHHHHHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 9995 78999999999999986 689999999999999999999999999999999999999
Q ss_pred HccccccCCCCCcccCCCCCCCCCCeeeccccCccCcCCC
Q 008679 377 MTTAWMKNNKALPITNADGSIATPFSFGSGHFRPTKAADP 416 (557)
Q Consensus 377 ~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~A~~~ 416 (557)
++||++.... ....+|+|+||+.+|++.
T Consensus 302 ~~tA~~~~~~------------~~~~~G~G~ld~~~A~~~ 329 (347)
T 2iy9_A 302 LESADKYPSL------------VDKVTEGRVLNAEKAISM 329 (347)
T ss_dssp HHHSEECGGG------------TTTSGGGEECCHHHHHHH
T ss_pred HHhCccCCCC------------CCccccCCEecHHHHHHH
Confidence 9999987642 236899999999999984
No 22
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00 E-value=6.9e-42 Score=353.39 Aligned_cols=221 Identities=24% Similarity=0.306 Sum_probs=181.2
Q ss_pred CCCchhhHHhhccCCCCCCCccCCCCCceeeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHH-------
Q 008679 2 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIR------- 74 (557)
Q Consensus 2 ~GHGThVAgiiAG~~~~~~~~~~g~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~A~~------- 74 (557)
.||||||||||+|... ....+.||||+|+|+.+|+++..+ +...+++++|++|++
T Consensus 102 ~gHGT~vAgiia~~~~---------~~~g~~GvAp~a~l~~~~v~~~~~---------~~~~~~~~ai~~a~~~~~~~~~ 163 (340)
T 3lpc_A 102 SWHGSHVAGTIAAVTN---------NRIGVAGVAYGAKVVPVRALGRCG---------GYDSDISDGLYWAAGGRIAGIP 163 (340)
T ss_dssp CCHHHHHHHHHHCCCS---------SSSSCCCTTTTSEEEEEECCBTTB---------CCHHHHHHHHHHHHTCCCTTSC
T ss_pred CCCHHHHHHHHHccCC---------CCCcceeecCCCEEEEEEEecCCC---------CcHHHHHHHHHHHhcccccccc
Confidence 4799999999999732 222358999999999999998764 778899999999998
Q ss_pred ---CCCcEEEEecCCCCCCCCCcchHHHHHHHHHhCCcEEEEecCCCCCCCC-CCCCCCCceEEecccccCcceeeeEEe
Q 008679 75 ---DGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPS-SLSNLAPWLITVGAGSLDRDFVGPVVL 150 (557)
Q Consensus 75 ---~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~-~~~~~ap~vitVga~~~~~~~~~~~~~ 150 (557)
.+++|||||||.. ......+..++.++.++|++||+||||+|.... ..+...+++|+|||...
T Consensus 164 ~~~~~~~Vin~S~G~~---~~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~---------- 230 (340)
T 3lpc_A 164 ENRNPAKVINMSLGSD---GQCSYNAQTMIDRATRLGALVVVAAGNENQNASNTWPTSCNNVLSVGATTS---------- 230 (340)
T ss_dssp CCSSCCSEEEECCCEE---SCCCHHHHHHHHHHHHHTCEEEEECCSSSSBGGGEETTTSSSCEEEEEECT----------
T ss_pred cccCCCeEEEeCcCCC---CCcchhHHHHHHHHHhCCcEEEEeCCCCCCCCCCcCCccCCceEEEecCCC----------
Confidence 8999999999982 223456777888899999999999999986532 23445688999997321
Q ss_pred CCCcEEEeeeeccCCCCceeeeEeecccccCCcCCCCCCCcCCCCCCCCCccceEEEEeeCCccchhhhHHHhhcCceEE
Q 008679 151 GTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGL 230 (557)
Q Consensus 151 ~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~gv 230 (557)
T Consensus 231 -------------------------------------------------------------------------------- 230 (340)
T 3lpc_A 231 -------------------------------------------------------------------------------- 230 (340)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEeCCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcCCe
Q 008679 231 ILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPD 310 (557)
Q Consensus 231 i~~n~~~~~~~~~~~~~~ip~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPD 310 (557)
.+.++.||++|| |||
T Consensus 231 ---------------------------------------------------------~~~~~~~S~~g~--------~~d 245 (340)
T 3lpc_A 231 ---------------------------------------------------------RGIRASFSNYGV--------DVD 245 (340)
T ss_dssp ---------------------------------------------------------TSSBCTTCCBST--------TCC
T ss_pred ---------------------------------------------------------CCCcCCCCCCCC--------Cce
Confidence 256789999997 569
Q ss_pred eeecCCcEEecccCCCCCCccccCccccceeeeccccchhhhHHHHHHHHHhh-C---CCCCHHHHHHHHHccccccCCC
Q 008679 311 ITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAI-H---PDWSSAAIRSALMTTAWMKNNK 386 (557)
Q Consensus 311 I~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~-~---p~~s~~~ik~~L~~TA~~~~~~ 386 (557)
|+|||++|+++++..... ...+.|..++|||||||||||++|||+|+ + |+|++++||++|++||++...
T Consensus 246 i~ApG~~i~s~~~~~~~~------~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~p~lt~~~v~~~L~~tA~~~~~- 318 (340)
T 3lpc_A 246 LAAPGQDILSTVDSGTRR------PVSDAYSFMAGTSMATPHVSGVAALVISAANSVNKNLTPAELKDVLVSTTSPFNG- 318 (340)
T ss_dssp EEEECSSEEEEEESCSSS------CCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCSS-
T ss_pred EEecCCCeecccCCCCcC------CCCCcceecccHhHHHHHHHHHHHHHHHhhhhhCCCCCHHHHHHHHHhcCCcCCC-
Confidence 999999999998764311 11256999999999999999999999998 5 999999999999999998753
Q ss_pred CCcccCCCCCCCCCCeeeccccCccCcCCC
Q 008679 387 ALPITNADGSIATPFSFGSGHFRPTKAADP 416 (557)
Q Consensus 387 g~~~~~~~~~~~~~~~~G~G~vn~~~A~~~ 416 (557)
.....+|+|+||+.+|++.
T Consensus 319 -----------~~~~~~G~G~vd~~~Av~~ 337 (340)
T 3lpc_A 319 -----------RLDRALGSGIVDAEAAVNS 337 (340)
T ss_dssp -----------CCSSCCCSSBCCHHHHHHH
T ss_pred -----------CCCCCcccceecHHHHHHH
Confidence 2456899999999999874
No 23
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00 E-value=7.4e-42 Score=364.32 Aligned_cols=247 Identities=28% Similarity=0.309 Sum_probs=187.5
Q ss_pred CCCchhhHHhhccCCCCCCCccCCCCCceeeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHHCCCcEEE
Q 008679 2 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDGVHVLS 81 (557)
Q Consensus 2 ~GHGThVAgiiAG~~~~~~~~~~g~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~A~~~gvdVIn 81 (557)
+||||||||||+|+ |. .+.||||+|+|+.+|+++..+.. .....++.++|++|++.|++|||
T Consensus 66 ~gHGT~VAgiiag~---------g~---~~~GvAp~a~l~~~~v~~~~g~~------~~~~~~~~~ai~~a~~~g~~Vin 127 (434)
T 1wmd_A 66 NGHGTHVAGSVLGN---------GS---TNKGMAPQANLVFQSIMDSGGGL------GGLPSNLQTLFSQAYSAGARIHT 127 (434)
T ss_dssp SSHHHHHHHHHHCC---------SS---SSCCSSTTSEEEEEECCCTTSSC------TTSCSSHHHHHHHHHHTTCSEEE
T ss_pred CCcHHHHHHHHHcC---------CC---CceeeCCCCEEEEEEeecCCCcc------ccccHHHHHHHHHHHhcCCeEEE
Confidence 69999999999986 22 14799999999999999765420 11345789999999999999999
Q ss_pred EecCCCCCCCCCcchHHHHHHHH-HhCCcEEEEecCCCCCCCCCCC--CCCCceEEecccccCcceeeeEEeCCCcEEEe
Q 008679 82 ISIGTNQPFAFNRDGIAIGALNA-VKHNILVACSAGNSGPAPSSLS--NLAPWLITVGAGSLDRDFVGPVVLGTGMEIIG 158 (557)
Q Consensus 82 ~SlG~~~~~~~~~~~~~~a~~~a-~~~Gv~vV~AAGN~G~~~~~~~--~~ap~vitVga~~~~~~~~~~~~~~~~~~~~g 158 (557)
||||..... ..++...+++++ .++|++||+||||+|.....+. ..++++|+|||+...+...
T Consensus 128 ~S~G~~~~~--~~~~~~~~id~~~~~~gvlvV~AAGN~g~~~~~~~~Pa~~~~vitVga~~~~~~~~------------- 192 (434)
T 1wmd_A 128 NSWGAAVNG--AYTTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGATENLRPSF------------- 192 (434)
T ss_dssp ECCCBCCTT--CCCHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEEECCSCGGG-------------
T ss_pred ecCCCCcCC--cCCHHHHHHHHHHhCCCeEEEEECCCCCCCCcccCCcccCCccEEEecccccCccc-------------
Confidence 999984311 224556666665 6899999999999997654444 4469999999864321000
Q ss_pred eeeccCCCCceeeeEeecccccCCcCCCCCCCcCCCCCCCCCccceEEEEeeCCccchhhhHHHhhcCceEEEEEeCCCC
Q 008679 159 KTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPAN 238 (557)
Q Consensus 159 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~gvi~~n~~~~ 238 (557)
|.
T Consensus 193 -------------------------------------------------------------------~~----------- 194 (434)
T 1wmd_A 193 -------------------------------------------------------------------GS----------- 194 (434)
T ss_dssp -------------------------------------------------------------------CG-----------
T ss_pred -------------------------------------------------------------------Cc-----------
Confidence 00
Q ss_pred CCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcCCeeeecCCcE
Q 008679 239 GNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDITAPGLNI 318 (557)
Q Consensus 239 ~~~~~~~~~~ip~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I 318 (557)
.....+.+++||+|||+.+ +++||||+|||++|
T Consensus 195 ---------------------------------------------~~~~~~~~a~fS~~G~~~~--g~~kpdi~ApG~~i 227 (434)
T 1wmd_A 195 ---------------------------------------------YADNINHVAQFSSRGPTKD--GRIKPDVMAPGTFI 227 (434)
T ss_dssp ---------------------------------------------GGSCTTSBCTTSCCCCCTT--SCCCCCEEEECSSE
T ss_pred ---------------------------------------------ccCCCCccccccCCCCCCC--CCCCceEEcCCCCe
Confidence 0011367899999999985 99999999999999
Q ss_pred EecccCCCCCCccccCccccceeeeccccchhhhHHHHHHHHHhhCCCC-----CHHHHHHHHHccccccCCCCCcccCC
Q 008679 319 LAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDW-----SSAAIRSALMTTAWMKNNKALPITNA 393 (557)
Q Consensus 319 ~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~-----s~~~ik~~L~~TA~~~~~~g~~~~~~ 393 (557)
+++++........ .....+.|..++|||||||||||++|||+|++|++ ++++||++|++||+++..
T Consensus 228 ~s~~~~~~~~~~~-~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~s~~~vk~~L~~tA~~~~~-------- 298 (434)
T 1wmd_A 228 LSARSSLAPDSSF-WANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAGAADIGL-------- 298 (434)
T ss_dssp EEECCTTCCGGGS-SEEEETTEEEECSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHCBCCSS--------
T ss_pred EecCCCCCCCccc-ccCCCCceEeecchhHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHcCCcccCC--------
Confidence 9998642210000 00113689999999999999999999999998865 899999999999987532
Q ss_pred CCCCCCCCeeeccccCccCcCCCCc
Q 008679 394 DGSIATPFSFGSGHFRPTKAADPGL 418 (557)
Q Consensus 394 ~~~~~~~~~~G~G~vn~~~A~~~~l 418 (557)
..++..+|||+||+.+|++..+
T Consensus 299 ---~~~~~~~G~G~vd~~~a~~~~~ 320 (434)
T 1wmd_A 299 ---GYPNGNQGWGRVTLDKSLNVAY 320 (434)
T ss_dssp ---CSSCTTTTTCBCCHHHHHTCEE
T ss_pred ---CCCCccCCcCeEeHHHhcccce
Confidence 2467889999999999997543
No 24
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00 E-value=2e-39 Score=324.94 Aligned_cols=187 Identities=29% Similarity=0.334 Sum_probs=162.0
Q ss_pred CCCCchhhHHhhccCCCCCCCccCCCCCceeeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHHCCC---
Q 008679 1 MDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDGV--- 77 (557)
Q Consensus 1 ~~GHGThVAgiiAG~~~~~~~~~~g~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~A~~~gv--- 77 (557)
.+||||||||||+|+ ..||||+|+|+.+|+++..+ .+..++++++|+|++++++
T Consensus 66 ~~gHGT~vAgiia~~---------------~~GvAp~a~i~~~~v~~~~g--------~~~~~~~~~ai~~a~~~~~~~~ 122 (279)
T 2pwa_A 66 GNGHGTHCAGTVGSR---------------TYGVAKKTQLFGVKVLDDNG--------SGQYSTIIAGMDFVASDKNNRN 122 (279)
T ss_dssp SSSHHHHHHHHHHCT---------------TTCSSTTCEEEEEECSCTTS--------CCCHHHHHHHHHHHHHHGGGSC
T ss_pred CCCCHHHHHHHHHhc---------------ccccCCCCEEEEEEeEcCCC--------CcCHHHHHHHHHHHHhcCcccc
Confidence 369999999999976 15999999999999998765 3788999999999999887
Q ss_pred ----cEEEEecCCCCCCCCCcchHHHHHHHHHhCCcEEEEecCCCCCCCC-CCCCCCCceEEecccccCcceeeeEEeCC
Q 008679 78 ----HVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPS-SLSNLAPWLITVGAGSLDRDFVGPVVLGT 152 (557)
Q Consensus 78 ----dVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~-~~~~~ap~vitVga~~~~~~~~~~~~~~~ 152 (557)
+|||||||.. ....+..++.++.++|++||+||||+|.... ..+...|++|+||+...
T Consensus 123 ~~~~~Vin~S~G~~-----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~------------ 185 (279)
T 2pwa_A 123 CPKGVVASLSLGGG-----YSSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASDR------------ 185 (279)
T ss_dssp CTTEEEEEECCCEE-----CCHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEEEECT------------
T ss_pred CCCccEEEecCCCC-----CCHHHHHHHHHHHHCCCEEEEECCCCCCcCCCcCcccCCcEEEEEEecC------------
Confidence 9999999982 3467888889999999999999999996532 23445689999997321
Q ss_pred CcEEEeeeeccCCCCceeeeEeecccccCCcCCCCCCCcCCCCCCCCCccceEEEEeeCCccchhhhHHHhhcCceEEEE
Q 008679 153 GMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLIL 232 (557)
Q Consensus 153 ~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~gvi~ 232 (557)
T Consensus 186 -------------------------------------------------------------------------------- 185 (279)
T 2pwa_A 186 -------------------------------------------------------------------------------- 185 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EeCCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcCCeee
Q 008679 233 GNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDIT 312 (557)
Q Consensus 233 ~n~~~~~~~~~~~~~~ip~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~ 312 (557)
.+.++.||+|||. |||+
T Consensus 186 -------------------------------------------------------~~~~~~~S~~G~~--------~di~ 202 (279)
T 2pwa_A 186 -------------------------------------------------------YDRRSSFSNYGSV--------LDIF 202 (279)
T ss_dssp -------------------------------------------------------TSBBCTTCCBSTT--------CCEE
T ss_pred -------------------------------------------------------CCCcCCcCCCCCc--------ceEE
Confidence 2567899999985 4999
Q ss_pred ecCCcEEecccCCCCCCccccCccccceeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHccccccC
Q 008679 313 APGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKN 384 (557)
Q Consensus 313 APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~ 384 (557)
|||++|+++++. +.|..++|||||||||||++|||+|+ |++++.+||++|++||++..
T Consensus 203 APG~~i~s~~~~-------------~~~~~~sGTS~AaP~VaG~aAll~~~-p~lt~~~v~~~L~~tA~~~~ 260 (279)
T 2pwa_A 203 GPGTDILSTWIG-------------GSTRSISGTSMATPHVAGLAAYLMTL-GKTTAASACRYIADTANKGD 260 (279)
T ss_dssp EECSSEEEEETT-------------TEEEEECSHHHHHHHHHHHHHHHHHT-TSCCTTTHHHHHHHHSEESC
T ss_pred EecCCeEEeecC-------------CCEEEcCChHHHHHHHHHHHHHHHhC-CCCCHHHHHHHHHHhCcccc
Confidence 999999999986 68999999999999999999999999 99999999999999998763
No 25
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00 E-value=1.3e-38 Score=319.71 Aligned_cols=188 Identities=26% Similarity=0.369 Sum_probs=162.4
Q ss_pred CCCchhhHHhhccCCCCCCCccCCCCCceeeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHHC--CCcE
Q 008679 2 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRD--GVHV 79 (557)
Q Consensus 2 ~GHGThVAgiiAG~~~~~~~~~~g~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~A~~~--gvdV 79 (557)
+||||||||||+|+ . .||||+|+|+.+|+++..+ .+..+++++||+|++++ +++|
T Consensus 68 ~gHGT~vAgiia~~---------~------~GvAp~a~l~~~kv~~~~g--------~~~~~~~~~ai~~a~~~~~~~~V 124 (284)
T 1sh7_A 68 NGHGTHVAGTIGGS---------Q------YGVAKNVNIVGVRVLSCSG--------SGTTSGVISGVDWVAQNASGPSV 124 (284)
T ss_dssp SSHHHHHHHHHHCT---------T------TCSSTTCEEEEEECBCTTS--------CBCHHHHHHHHHHHHHHCCSSEE
T ss_pred CCcHHHHHHHHhcc---------c------CCcCCCCEEEEEEeeCCCC--------CcCHHHHHHHHHHHHhCCCCCcE
Confidence 69999999999986 2 4999999999999998766 37888999999999984 7999
Q ss_pred EEEecCCCCCCCCCcchHHHHHHHHHhCCcEEEEecCCCCCCCC-CCCCCCCceEEecccccCcceeeeEEeCCCcEEEe
Q 008679 80 LSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPS-SLSNLAPWLITVGAGSLDRDFVGPVVLGTGMEIIG 158 (557)
Q Consensus 80 In~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~-~~~~~ap~vitVga~~~~~~~~~~~~~~~~~~~~g 158 (557)
||||||.. ....+..++.++.++|++||+||||+|.... ..+...|++|+||+...
T Consensus 125 in~S~G~~-----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~------------------ 181 (284)
T 1sh7_A 125 ANMSLGGG-----QSTALDSAVQGAIQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTTS------------------ 181 (284)
T ss_dssp EEECCCBS-----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGSBTTTCTTSEEEEEECT------------------
T ss_pred EEeCCCCC-----CCHHHHHHHHHHHHCCCEEEEECCcCCCCCCccccccCCCeEEEEEecC------------------
Confidence 99999983 3467888889999999999999999986432 23445689999997321
Q ss_pred eeeccCCCCceeeeEeecccccCCcCCCCCCCcCCCCCCCCCccceEEEEeeCCccchhhhHHHhhcCceEEEEEeCCCC
Q 008679 159 KTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPAN 238 (557)
Q Consensus 159 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~gvi~~n~~~~ 238 (557)
T Consensus 182 -------------------------------------------------------------------------------- 181 (284)
T 1sh7_A 182 -------------------------------------------------------------------------------- 181 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcCCeeeecCCcE
Q 008679 239 GNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDITAPGLNI 318 (557)
Q Consensus 239 ~~~~~~~~~~ip~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I 318 (557)
.+.++.||++||.. ||+|||++|
T Consensus 182 -------------------------------------------------~~~~~~~S~~G~~~--------di~ApG~~i 204 (284)
T 1sh7_A 182 -------------------------------------------------SDSRSSFSNWGSCV--------DLFAPGSQI 204 (284)
T ss_dssp -------------------------------------------------TSBBCTTCCBSTTC--------CEEEECSSE
T ss_pred -------------------------------------------------CCCcCcccCCCCcc--------EEEeccCCe
Confidence 25678999999854 999999999
Q ss_pred EecccCCCCCCccccCccccceeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHccccccCC
Q 008679 319 LAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNN 385 (557)
Q Consensus 319 ~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~ 385 (557)
+++++. +.|..++|||||||||||++|||+|++|+|+++|||++|++||.+...
T Consensus 205 ~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~ 258 (284)
T 1sh7_A 205 KSAWYD-------------GGYKTISGTSMATPHVAGVAALYLQENNGLTPLQLTGLLNSRASENKV 258 (284)
T ss_dssp EEECTT-------------SSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESCC
T ss_pred EEecCC-------------CCEEEccChHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCc
Confidence 999876 689999999999999999999999999999999999999999987653
No 26
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00 E-value=6.6e-38 Score=314.07 Aligned_cols=189 Identities=29% Similarity=0.357 Sum_probs=161.3
Q ss_pred CCCchhhHHhhccCCCCCCCccCCCCCceeeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHH--CCCcE
Q 008679 2 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIR--DGVHV 79 (557)
Q Consensus 2 ~GHGThVAgiiAG~~~~~~~~~~g~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~A~~--~gvdV 79 (557)
+||||||||||+|+ . .||||+|+|+.+|++++.+ .+..++++++|+|+++ .+++|
T Consensus 70 ~gHGT~vAgiia~~---------~------~GvAp~a~i~~~~v~~~~g--------~~~~~~~~~ai~~a~~~~~g~~V 126 (278)
T 2b6n_A 70 NGHGTHVAGTIGGS---------T------YGVAKNVNVVGVRVLNCSG--------SGSNSGVIAGINWVKNNASGPAV 126 (278)
T ss_dssp SSHHHHHHHHHHCT---------T------TCSSTTCEEEEEECSCTTS--------CCCHHHHHHHHHHHHHHCCSSEE
T ss_pred CCcHHHHHHHHHCC---------C------cCCCCCCeEEEEEEECCCC--------CccHHHHHHHHHHHHhCCCCCeE
Confidence 69999999999976 1 5999999999999998766 3788899999999998 59999
Q ss_pred EEEecCCCCCCCCCcchHHHHHHHHHhCCcEEEEecCCCCCCCCC-CCCCCCceEEecccccCcceeeeEEeCCCcEEEe
Q 008679 80 LSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSS-LSNLAPWLITVGAGSLDRDFVGPVVLGTGMEIIG 158 (557)
Q Consensus 80 In~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~-~~~~ap~vitVga~~~~~~~~~~~~~~~~~~~~g 158 (557)
||||||... ...+..++.++.++|++||+||||+|..... .+...+++|+||+...
T Consensus 127 in~S~G~~~-----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~------------------ 183 (278)
T 2b6n_A 127 ANMSLGGGA-----SQATDDAVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGSTTS------------------ 183 (278)
T ss_dssp EEECCCEEC-----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT------------------
T ss_pred EEECCCCCc-----CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCCcCcccCCCeEEEEeeCC------------------
Confidence 999999832 4677888889999999999999999965322 2445688999987321
Q ss_pred eeeccCCCCceeeeEeecccccCCcCCCCCCCcCCCCCCCCCccceEEEEeeCCccchhhhHHHhhcCceEEEEEeCCCC
Q 008679 159 KTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPAN 238 (557)
Q Consensus 159 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~gvi~~n~~~~ 238 (557)
T Consensus 184 -------------------------------------------------------------------------------- 183 (278)
T 2b6n_A 184 -------------------------------------------------------------------------------- 183 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcCCeeeecCCcE
Q 008679 239 GNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDITAPGLNI 318 (557)
Q Consensus 239 ~~~~~~~~~~ip~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I 318 (557)
.+.++.||++||. |||+|||++|
T Consensus 184 -------------------------------------------------~~~~~~~S~~G~~--------~di~ApG~~i 206 (278)
T 2b6n_A 184 -------------------------------------------------NDSRSSFSNYGTC--------LDIYAPGSSI 206 (278)
T ss_dssp -------------------------------------------------TSBBCTTCCBSTT--------CCEEEECSSE
T ss_pred -------------------------------------------------CCCcCCcCCCCCC--------CeEEeCCCCe
Confidence 2567799999984 5999999999
Q ss_pred EecccCCCCCCccccCccccceeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHccccccC
Q 008679 319 LAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKN 384 (557)
Q Consensus 319 ~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~ 384 (557)
+++++... +.|..++|||||||||||++|||+|++|+|++++||++|++||++..
T Consensus 207 ~s~~~~~~-----------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 261 (278)
T 2b6n_A 207 TSSWYTSN-----------SATNTISGTSMASPHVAGVAALYLDENPNLSPAQVTNLLKTRATADK 261 (278)
T ss_dssp EEECTTST-----------TCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred ECcccCCC-----------CCEEEeCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC
Confidence 99986521 57899999999999999999999999999999999999999998754
No 27
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00 E-value=6.2e-39 Score=344.78 Aligned_cols=235 Identities=15% Similarity=0.084 Sum_probs=176.2
Q ss_pred CCCchhhHHhhccCCCCCCCccCCCCCceeeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHH-CCCcEE
Q 008679 2 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIR-DGVHVL 80 (557)
Q Consensus 2 ~GHGThVAgiiAG~~~~~~~~~~g~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~A~~-~gvdVI 80 (557)
+||||||||||||... +...+.||||+|+|+.+|+++ +...++++|++++++ ++++||
T Consensus 85 ~gHGT~vAGiiaa~~~---------n~~g~~GvAp~a~i~~~rv~~------------g~~~~~~~ai~~a~~~~~~~Vi 143 (471)
T 1p8j_A 85 NRHGTRCAGEVAAVAN---------NGVCGVGVAYNARIGGVRMLD------------GEVTDAVEARSLGLNPNHIHIY 143 (471)
T ss_dssp TCHHHHHHHHHHCCSS---------SSSSCCCTTTTSEEEEEECSS------------SCCCHHHHHHHHTSCTTTCCEE
T ss_pred CCcHHHHHHHHHeecc---------CCCCCEEECCCCeEEEEEccC------------CchhHHHHHHHhhhccCCCeEE
Confidence 6999999999998732 222358999999999999985 224569999999999 999999
Q ss_pred EEecCCCCCCCC---CcchHHHHHHHHHh-----CCcEEEEecCCCCCCCCCC----CCCCCceEEecccccCcceeeeE
Q 008679 81 SISIGTNQPFAF---NRDGIAIGALNAVK-----HNILVACSAGNSGPAPSSL----SNLAPWLITVGAGSLDRDFVGPV 148 (557)
Q Consensus 81 n~SlG~~~~~~~---~~~~~~~a~~~a~~-----~Gv~vV~AAGN~G~~~~~~----~~~ap~vitVga~~~~~~~~~~~ 148 (557)
|||||....... ....+..++.++.+ +|++||+||||+|...... ...++++|+|||...
T Consensus 144 n~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vItVgA~~~-------- 215 (471)
T 1p8j_A 144 SASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQ-------- 215 (471)
T ss_dssp EECCBSCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEECT--------
T ss_pred EeccCcCCCCCcccCcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceEEEecccC--------
Confidence 999998432211 22334555555543 6999999999999653221 123478999997321
Q ss_pred EeCCCcEEEeeeeccCCCCceeeeEeecccccCCcCCCCCCCcCCCCCCCCCccceEEEEeeCCccchhhhHHHhhcCce
Q 008679 149 VLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGV 228 (557)
Q Consensus 149 ~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~ 228 (557)
T Consensus 216 -------------------------------------------------------------------------------- 215 (471)
T 1p8j_A 216 -------------------------------------------------------------------------------- 215 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEEeCCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcC
Q 008679 229 GLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILK 308 (557)
Q Consensus 229 gvi~~n~~~~~~~~~~~~~~ip~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lK 308 (557)
.+.++.||++||... ...+
T Consensus 216 -----------------------------------------------------------~g~~a~~S~~g~~~~--~~~~ 234 (471)
T 1p8j_A 216 -----------------------------------------------------------FGNVPWYSEACSSTL--ATTY 234 (471)
T ss_dssp -----------------------------------------------------------TSCCCTTCCBCTTCC--EEEE
T ss_pred -----------------------------------------------------------CCCcccccCCCCcce--EEeC
Confidence 256789999999875 4556
Q ss_pred CeeeecCCcEEecccCCCCCCccccCccccceeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHccccccCCCCC
Q 008679 309 PDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNNKAL 388 (557)
Q Consensus 309 PDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~ 388 (557)
|...+||.+|+++.+.. ..|..++|||||||||||++|||+|++|+|++++||++|++||++......
T Consensus 235 ~~~~~~g~~i~st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~ 302 (471)
T 1p8j_A 235 SSGNQNEKQIVTTDLRQ------------KCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNAD 302 (471)
T ss_dssp CCCSTTSCCEEEEETTT------------EEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCTTCCCS
T ss_pred CCCCCCCCCEEEeeCCC------------CccccCCCcccccchhhhHHHHHHhhCCCCCHHHHHHHHHhcCccCCCCCC
Confidence 77777778999997642 569999999999999999999999999999999999999999998764321
Q ss_pred cccCCCCCCCCCCeeeccccCccCcCCCCc
Q 008679 389 PITNADGSIATPFSFGSGHFRPTKAADPGL 418 (557)
Q Consensus 389 ~~~~~~~~~~~~~~~G~G~vn~~~A~~~~l 418 (557)
..............||+|+||+.+|++...
T Consensus 303 ~~~~n~~g~~~~~~~G~G~vda~~Av~~a~ 332 (471)
T 1p8j_A 303 DWATNGVGRKVSHSYGYGLLDAGAMVALAQ 332 (471)
T ss_dssp CCEECTTSCEEBTTTBTCBCCHHHHHHHHH
T ss_pred CceecCCCcccCCCCCCEEEcHhHHHHHhh
Confidence 111000011235689999999999998543
No 28
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00 E-value=5e-38 Score=314.90 Aligned_cols=191 Identities=27% Similarity=0.373 Sum_probs=164.2
Q ss_pred CCCCchhhHHhhccCCCCCCCccCCCCCceeeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHHC--CCc
Q 008679 1 MDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRD--GVH 78 (557)
Q Consensus 1 ~~GHGThVAgiiAG~~~~~~~~~~g~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~A~~~--gvd 78 (557)
++||||||||||+|. . .||||+|+|+.+|++++.+ .....+++++|+++++. +++
T Consensus 67 ~~gHGT~vAgiiag~---------~------~GvAp~a~l~~~~v~~~~~--------~~~~~~~~~ai~~~~~~~~~~~ 123 (276)
T 4dzt_A 67 CNGHGTHVAGTIGGV---------T------YGVAKAVNLYAVRVLDCNG--------SGSTSGVIAGVDWVTRNHRRPA 123 (276)
T ss_dssp SSSHHHHHHHHHHCT---------T------TCSSTTCEEEEEECSCTTS--------CCCHHHHHHHHHHHHHHCCSSE
T ss_pred CCCCHHHHHHHHHcc---------c------cCCCCCCEEEEEEEeCCCC--------CcCHHHHHHHHHHHHhcCCCCe
Confidence 369999999999986 2 5999999999999998776 37889999999999987 999
Q ss_pred EEEEecCCCCCCCCCcchHHHHHHHHHhCCcEEEEecCCCCCCCCCC-CCCCCceEEecccccCcceeeeEEeCCCcEEE
Q 008679 79 VLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSL-SNLAPWLITVGAGSLDRDFVGPVVLGTGMEII 157 (557)
Q Consensus 79 VIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~-~~~ap~vitVga~~~~~~~~~~~~~~~~~~~~ 157 (557)
|||||||.. ....+..++.++.++|++||+||||+|...... +...+++|+||+...
T Consensus 124 vin~S~g~~-----~~~~~~~a~~~a~~~gvlvv~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~----------------- 181 (276)
T 4dzt_A 124 VANMSLGGG-----VSTALDNAVKNSIAAGVVYAVAAGNDNANACNYSPARVAEALTVGATTS----------------- 181 (276)
T ss_dssp EEEECCCEE-----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT-----------------
T ss_pred EEEECCCCC-----CCHHHHHHHHHHHhCCCEEEEECCCCCCCCCCcCcccCCCEEEEEEECC-----------------
Confidence 999999982 246788888999999999999999998654332 445688999987321
Q ss_pred eeeeccCCCCceeeeEeecccccCCcCCCCCCCcCCCCCCCCCccceEEEEeeCCccchhhhHHHhhcCceEEEEEeCCC
Q 008679 158 GKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPA 237 (557)
Q Consensus 158 g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~gvi~~n~~~ 237 (557)
T Consensus 182 -------------------------------------------------------------------------------- 181 (276)
T 4dzt_A 182 -------------------------------------------------------------------------------- 181 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcCCeeeecCCc
Q 008679 238 NGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDITAPGLN 317 (557)
Q Consensus 238 ~~~~~~~~~~~ip~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~ 317 (557)
.+.++.||++||.. ||+|||++
T Consensus 182 --------------------------------------------------~~~~~~~S~~g~~~--------dv~ApG~~ 203 (276)
T 4dzt_A 182 --------------------------------------------------SDARASFSNYGSCV--------DLFAPGAS 203 (276)
T ss_dssp --------------------------------------------------TSBBCTTCCBSTTC--------CEEEECSS
T ss_pred --------------------------------------------------CCCcCCcCCCCCCc--------eEEeCCCC
Confidence 25678999999965 99999999
Q ss_pred EEecccCCCCCCccccCccccceeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHccccccCC
Q 008679 318 ILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNN 385 (557)
Q Consensus 318 I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~ 385 (557)
|+++++... ..|..++|||||||||||++|||+|++|++++++||++|++||++...
T Consensus 204 i~s~~~~~~-----------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~ 260 (276)
T 4dzt_A 204 IPSAWYTSD-----------TATQTLNGTSMATPHVAGVAALYLEQNPSATPASVASAILNGATTGRL 260 (276)
T ss_dssp EEEECTTSS-----------SCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESCC
T ss_pred eEccccCCC-----------CceEEeeEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCcCCcc
Confidence 999987632 579999999999999999999999999999999999999999998754
No 29
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00 E-value=9.1e-38 Score=345.34 Aligned_cols=125 Identities=21% Similarity=0.221 Sum_probs=89.1
Q ss_pred CCccccccCCCCCCCCCCCcCCeeeecCCcEEecccC-------CCCCC--------------ccccCccccceeeeccc
Q 008679 288 APFMANFTSRGPNALDPYILKPDITAPGLNILAAWSE-------ASSPS--------------KLAFDKRIVKYTIFSGT 346 (557)
Q Consensus 288 ~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~-------~~~~~--------------~~~~~~~~~~y~~~sGT 346 (557)
.+.++.||++||.. ||+|||++|.+..+. ..... ....+...+.|..++||
T Consensus 264 ~g~~a~fS~~G~~v--------dv~APG~~i~~~~p~i~ttd~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~sGT 335 (600)
T 2oxa_A 264 DGVRSSYSSVGSNI--------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGT 335 (600)
T ss_dssp TSSBCTTCCBCTTE--------EEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSH
T ss_pred CCCcCCcCCCCCCe--------EEEeccCCCCcCCCceEeccccccccccccccccccccccccccccCCcccccccccc
Confidence 46788999999976 999999996554332 00000 00001112348999999
Q ss_pred cchhhhHHHHHHHHHhhCCCCCHHHHHHHHHccccccCCCCCccc----C----------------CCCCCCCCCeeecc
Q 008679 347 SMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNNKALPIT----N----------------ADGSIATPFSFGSG 406 (557)
Q Consensus 347 SMAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~----~----------------~~~~~~~~~~~G~G 406 (557)
|||||||||++|||+|++|+|++++||++|++||++++..+.++. + .......+..||||
T Consensus 336 S~AaP~VAGvaALl~s~~P~lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~G~~~~~~~~~~w~~n~~g~~~~~~~G~G 415 (600)
T 2oxa_A 336 SSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTYGFG 415 (600)
T ss_dssp HHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTTTBTC
T ss_pred hHHhHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCcccccccccccccccccccccccccccccCCCccccccCCCc
Confidence 999999999999999999999999999999999999865432210 0 00112235679999
Q ss_pred ccCccCcCCCCcee
Q 008679 407 HFRPTKAADPGLVY 420 (557)
Q Consensus 407 ~vn~~~A~~~~lv~ 420 (557)
+||+.+|++.+.-|
T Consensus 416 ~vda~~Av~~A~~~ 429 (600)
T 2oxa_A 416 LIDVNKALELAANH 429 (600)
T ss_dssp BCCHHHHHHHHTTC
T ss_pred hhhHHHHHHHHHhc
Confidence 99999999854433
No 30
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00 E-value=9.4e-38 Score=333.36 Aligned_cols=224 Identities=22% Similarity=0.223 Sum_probs=171.0
Q ss_pred CCCchhhHHhhccCCCCCCCccCCCCCceeeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHHC------
Q 008679 2 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRD------ 75 (557)
Q Consensus 2 ~GHGThVAgiiAG~~~~~~~~~~g~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~A~~~------ 75 (557)
+||||||||||+|+ . .||||+|+|+.+|+++..+ .+..+++++||+|+++.
T Consensus 72 ~GHGThVAGIIag~---------~------~GVAP~A~L~~vkVl~~~G--------~g~~s~ii~ai~~a~~~~~~~~~ 128 (546)
T 2qtw_B 72 DSHGTHLAGVVSGR---------D------AGVAKGASMRSLRVLNCQG--------KGTVSGTLIGLEFIRKSQLVQPV 128 (546)
T ss_dssp THHHHHHHHHHHCT---------T------TCSSTTCEEEEEECSCTTS--------EEEHHHHHHHHHHHHHHHHHSCC
T ss_pred CChHHHHHHHHhcc---------C------CCcCCCCEEEEEEEECCCC--------CcCHHHHHHHHHHHHHhhhhccC
Confidence 58999999999987 2 4999999999999998766 36788999999999984
Q ss_pred CCcEEEEecCCCCCCCCCcchHHHHHHHHHhCCcEEEEecCCCCCCCC-CCCCCCCceEEecccccCcceeeeEEeCCCc
Q 008679 76 GVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPS-SLSNLAPWLITVGAGSLDRDFVGPVVLGTGM 154 (557)
Q Consensus 76 gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~-~~~~~ap~vitVga~~~~~~~~~~~~~~~~~ 154 (557)
+++|||||||+. ....+..++.++.++|++||+||||+|.... ..+...|++|+|||...+...
T Consensus 129 g~~VINmSlGg~-----~s~~l~~Ai~~A~~~GvlvVaAAGN~g~d~~~~sPAs~~~VItVGA~d~~g~~---------- 193 (546)
T 2qtw_B 129 GPLVVLLPLAGG-----YSRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQP---------- 193 (546)
T ss_dssp SCEEEEECEEEE-----CCHHHHHHHHHHHHTTCEEEEECCSBSSBGGGEETTTCTTSEEEEEECTTSCB----------
T ss_pred CCeEEEecCCCC-----CcHHHHHHHHHHHhCCCEEEEECCCCCCCCCccCcccCCCEEEEEEecCCCCc----------
Confidence 999999999982 3467888889999999999999999996532 224456899999985321100
Q ss_pred EEEeeeeccCCCCceeeeEeecccccCCcCCCCCCCcCCCCCCCCCccceEEEEeeCCccchhhhHHHhhcCceEEEEEe
Q 008679 155 EIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGN 234 (557)
Q Consensus 155 ~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~gvi~~n 234 (557)
T Consensus 194 -------------------------------------------------------------------------------- 193 (546)
T 2qtw_B 194 -------------------------------------------------------------------------------- 193 (546)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcCCeeeec
Q 008679 235 SPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDITAP 314 (557)
Q Consensus 235 ~~~~~~~~~~~~~~ip~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~AP 314 (557)
...-..||++|| ||||.||
T Consensus 194 -----------------------------------------------------a~~s~~fSn~G~--------~vDI~AP 212 (546)
T 2qtw_B 194 -----------------------------------------------------VTLGTLGTNFGR--------CVDLFAP 212 (546)
T ss_dssp -----------------------------------------------------CEETTEECCBST--------TCCEEEE
T ss_pred -----------------------------------------------------ccccCCcCCCCC--------cceEEec
Confidence 000013889987 5699999
Q ss_pred CCcEEecccCCCCCCccccCccccceeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHccccccCCCCCccc---
Q 008679 315 GLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNNKALPIT--- 391 (557)
Q Consensus 315 G~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~--- 391 (557)
|++|+++++... ..|..++|||||||||||++|||+|++|+|+++|||++|++||.+.......+.
T Consensus 213 G~~I~St~~~~~-----------~~y~~~SGTSmAAP~VAG~aALlls~~P~ltp~qVr~~L~~tAt~~~i~~~~~p~~~ 281 (546)
T 2qtw_B 213 GEDIIGASSDCS-----------TCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKDVINEAWFPEDQ 281 (546)
T ss_dssp CSSEEEECTTST-----------TCEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTSEESCSCGGGSCHHH
T ss_pred CccEEeeccCCC-----------CcEeeeCcCcHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhccccccCCccCcccc
Confidence 999999987631 579999999999999999999999999999999999999999976542211000
Q ss_pred ---CCC---CCCCCCCeeeccc--cCccCcCC
Q 008679 392 ---NAD---GSIATPFSFGSGH--FRPTKAAD 415 (557)
Q Consensus 392 ---~~~---~~~~~~~~~G~G~--vn~~~A~~ 415 (557)
..+ ........+|+|+ .++.++..
T Consensus 282 ~~~tpN~l~~~~~~~~~~G~~l~~~~~w~a~s 313 (546)
T 2qtw_B 282 RVLTPNLVAALPPSTHGAGWQLFCRTVWSAHS 313 (546)
T ss_dssp HTTSCCEECCCCCTTCC--CCCEEEEEECCCC
T ss_pred CCCCccchhccCCcccccCCCcchhchhccCC
Confidence 000 0112455678888 77766664
No 31
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00 E-value=6.7e-38 Score=339.02 Aligned_cols=230 Identities=16% Similarity=0.126 Sum_probs=174.9
Q ss_pred CCCchhhHHhhccCCCCCCCccCCCCCceeeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHHCCCcEEE
Q 008679 2 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDGVHVLS 81 (557)
Q Consensus 2 ~GHGThVAgiiAG~~~~~~~~~~g~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~A~~~gvdVIn 81 (557)
+||||||||||||... +...+.||||+|+|+.+|+++.. +...++++||++|++.+ +|||
T Consensus 98 ~gHGT~vAGiiaa~~~---------n~~~~~GvAp~a~i~~~rv~~~~----------~~~~~~~~ai~~a~~~~-~Iin 157 (503)
T 2id4_A 98 DYHGTRCAGEIAAKKG---------NNFCGVGVGYNAKISGIRILSGD----------ITTEDEAASLIYGLDVN-DIYS 157 (503)
T ss_dssp TTHHHHHHHHHHCCSS---------SSSSCCCTTTTSEEEEEECTTSC----------CCHHHHHHHTTTTTTTC-SEEE
T ss_pred CChHHHHHHHHHhccC---------CCCCcEEECCCCEEEEEEeeCCC----------CChHHHHHHHHhHhhcC-CEEE
Confidence 6999999999998732 12234799999999999998642 67888999999999988 9999
Q ss_pred EecCCCCCCCC---CcchHHHHHHHHH-----hCCcEEEEecCCCCCCCCCC--CC--CCCceEEecccccCcceeeeEE
Q 008679 82 ISIGTNQPFAF---NRDGIAIGALNAV-----KHNILVACSAGNSGPAPSSL--SN--LAPWLITVGAGSLDRDFVGPVV 149 (557)
Q Consensus 82 ~SlG~~~~~~~---~~~~~~~a~~~a~-----~~Gv~vV~AAGN~G~~~~~~--~~--~ap~vitVga~~~~~~~~~~~~ 149 (557)
||||....... ....+..++.++. .+|++||+||||+|...... .. .++++|+|||.+.
T Consensus 158 ~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI~VgA~~~--------- 228 (503)
T 2id4_A 158 CSWGPADDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDH--------- 228 (503)
T ss_dssp ECEESCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEECT---------
T ss_pred eCCCcCCCCccccCchHHHHHHHHHHHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCEEEEEeeCC---------
Confidence 99998432222 2234666666665 47999999999999653322 11 3477899987321
Q ss_pred eCCCcEEEeeeeccCCCCceeeeEeecccccCCcCCCCCCCcCCCCCCCCCccceEEEEeeCCccchhhhHHHhhcCceE
Q 008679 150 LGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVG 229 (557)
Q Consensus 150 ~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~g 229 (557)
T Consensus 229 -------------------------------------------------------------------------------- 228 (503)
T 2id4_A 229 -------------------------------------------------------------------------------- 228 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEeCCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcCC
Q 008679 230 LILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKP 309 (557)
Q Consensus 230 vi~~n~~~~~~~~~~~~~~ip~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKP 309 (557)
.+.++.||++||..
T Consensus 229 ----------------------------------------------------------~~~~a~~S~~g~~~-------- 242 (503)
T 2id4_A 229 ----------------------------------------------------------KDLHPPYSEGCSAV-------- 242 (503)
T ss_dssp ----------------------------------------------------------TSCCCTTCCCCTTE--------
T ss_pred ----------------------------------------------------------CCCcCCcCCCCCcc--------
Confidence 25667999999976
Q ss_pred eeee----cCCcEEecccCCCCCCccccCccccceeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHccccccCC
Q 008679 310 DITA----PGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNN 385 (557)
Q Consensus 310 DI~A----PG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~ 385 (557)
|+.| ||..|+++.... +.|..++|||||||||||++|||+|++|+|++.+||++|+.||+++..
T Consensus 243 ~~~a~~~gpG~~I~st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~ 310 (503)
T 2id4_A 243 MAVTYSSGSGEYIHSSDING------------RCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAVGLEK 310 (503)
T ss_dssp EEEEECSBTTBCEEEECSTT------------CEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCCTT
T ss_pred eEeecCCCCCCceEeecCCC------------CceecCCCccccchhhhHHHHHHHHhCCCCCHHHHHHHHHhccccCCC
Confidence 7777 899999995431 689999999999999999999999999999999999999999998764
Q ss_pred CCCccc-CCCCCCCCCCeeeccccCccCcCCCCc
Q 008679 386 KALPIT-NADGSIATPFSFGSGHFRPTKAADPGL 418 (557)
Q Consensus 386 ~g~~~~-~~~~~~~~~~~~G~G~vn~~~A~~~~l 418 (557)
...+-. ...........||+|+||+.+|++...
T Consensus 311 ~~~~~~~~~~~g~~~~~~~G~G~vda~~Av~~a~ 344 (503)
T 2id4_A 311 NADGDWRDSAMGKKYSHRYGFGKIDAHKLIEMSK 344 (503)
T ss_dssp CGGGCCEECSSSSEEBTTTBTCBCCHHHHHHHHT
T ss_pred CcCCCceecCCCCccCcccCCcEecHHHHHHHHh
Confidence 310100 000011234579999999999998543
No 32
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00 E-value=9.6e-38 Score=313.34 Aligned_cols=188 Identities=27% Similarity=0.328 Sum_probs=162.7
Q ss_pred CCCCchhhHHhhccCCCCCCCccCCCCCceeeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHHCC----
Q 008679 1 MDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDG---- 76 (557)
Q Consensus 1 ~~GHGThVAgiiAG~~~~~~~~~~g~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~A~~~g---- 76 (557)
++||||||||||+|+ . .||||+|+|+.+|+++..+ .+..++++++|+++++++
T Consensus 67 ~~gHGT~vAgii~~~---------~------~GvAp~a~l~~~~v~~~~~--------~~~~~~~~~ai~~~~~~~~~~~ 123 (279)
T 3f7m_A 67 GHGHGTHCAGTIGSK---------T------WGVAKKVSIFGVKVLDDSG--------SGSLSNIIAGMDFVASDRQSRN 123 (279)
T ss_dssp SSSHHHHHHHHHHCT---------T------TCSSTTCEEEEEECSCTTS--------CCCHHHHHHHHHHHHHHGGGSC
T ss_pred CCCcHHHHHHHHhcC---------c------cccCCCCEEEEEEeeCCCC--------CcCHHHHHHHHHHHHhcccccc
Confidence 369999999999976 1 5999999999999998776 378899999999999976
Q ss_pred ---CcEEEEecCCCCCCCCCcchHHHHHHHHHhCCcEEEEecCCCCCCCCCC-CCCCCceEEecccccCcceeeeEEeCC
Q 008679 77 ---VHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSL-SNLAPWLITVGAGSLDRDFVGPVVLGT 152 (557)
Q Consensus 77 ---vdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~-~~~ap~vitVga~~~~~~~~~~~~~~~ 152 (557)
++|||||||.. ....+..++.++.++|++||+||||+|...... +...+++|+||+...
T Consensus 124 ~~~~~Vin~S~g~~-----~~~~~~~a~~~a~~~gv~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~------------ 186 (279)
T 3f7m_A 124 CPRRTVASMSLGGG-----YSAALNQAAARLQSSGVFVAVAAGNDNRDAANTSPASEPTVCTVGATDS------------ 186 (279)
T ss_dssp CTTEEEEEECCCEE-----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT------------
T ss_pred CCCCeEEEeCCCcC-----ccHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCcCCCCCCCEEEEeecCC------------
Confidence 89999999972 456788889999999999999999998654332 445688999997321
Q ss_pred CcEEEeeeeccCCCCceeeeEeecccccCCcCCCCCCCcCCCCCCCCCccceEEEEeeCCccchhhhHHHhhcCceEEEE
Q 008679 153 GMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLIL 232 (557)
Q Consensus 153 ~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~gvi~ 232 (557)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 3f7m_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EeCCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcCCeee
Q 008679 233 GNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDIT 312 (557)
Q Consensus 233 ~n~~~~~~~~~~~~~~ip~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~ 312 (557)
.+.++.||++||.. ||.
T Consensus 187 -------------------------------------------------------~~~~~~~S~~g~~~--------di~ 203 (279)
T 3f7m_A 187 -------------------------------------------------------NDVRSTFSNYGRVV--------DIF 203 (279)
T ss_dssp -------------------------------------------------------TSBBCTTCCBSTTC--------CEE
T ss_pred -------------------------------------------------------CCCCCCCCCCCCCC--------eEE
Confidence 25678999999854 999
Q ss_pred ecCCcEEecccCCCCCCccccCccccceeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHccccccCC
Q 008679 313 APGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNN 385 (557)
Q Consensus 313 APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~ 385 (557)
|||++|+++++. +.|..++|||||||||||++|||+|++|+ ++++||++|++||.+...
T Consensus 204 ApG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~-t~~~v~~~L~~tA~~~~~ 262 (279)
T 3f7m_A 204 APGTSITSTWIG-------------GRTNTISGTSMATPHIAGLAAYLFGLEGG-SAGAMCGRIQTLSTKNVL 262 (279)
T ss_dssp EECSSEEEECGG-------------GCEEEECSHHHHHHHHHHHHHHHHHHTCC-CTTTHHHHHHHHSEESCC
T ss_pred ECCCCeEeecCC-------------CCEEEeeEHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHhcccccc
Confidence 999999999886 67999999999999999999999999999 999999999999987643
No 33
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00 E-value=2.8e-39 Score=353.77 Aligned_cols=193 Identities=25% Similarity=0.286 Sum_probs=0.0
Q ss_pred CCCchhhHHhhccCCCCCCCccCCCCCceeeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHHC------
Q 008679 2 DGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRD------ 75 (557)
Q Consensus 2 ~GHGThVAgiiAG~~~~~~~~~~g~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~A~~~------ 75 (557)
+||||||||||+|+ . .||||+|+|+.|||+++.+ .+..+++++||+|++++
T Consensus 224 ~GHGTHVAGiIAg~---------~------~GVAP~A~L~~vKVl~~~G--------~g~~s~ii~aI~~a~~~~~~~~~ 280 (692)
T 2p4e_P 224 DSHGTHLAGVVSGR---------D------AGVAKGASMRSLRVLNCQG--------KGTVSGTLIGLEFIRKSQLVQPV 280 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCcHHHhhhHhhcC---------C------CccCCCCEEEEEEeecCCC--------CCCHHHHHHHHHHHHhhhhcccC
Confidence 59999999999986 2 5999999999999998766 37788899999999986
Q ss_pred CCcEEEEecCCCCCCCCCcchHHHHHHHHHhCCcEEEEecCCCCCCCCCC-CCCCCceEEecccccCcceeeeEEeCCCc
Q 008679 76 GVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSL-SNLAPWLITVGAGSLDRDFVGPVVLGTGM 154 (557)
Q Consensus 76 gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~-~~~ap~vitVga~~~~~~~~~~~~~~~~~ 154 (557)
|++|||||||+. ....+..+++++.++|++||+||||+|...... +...|++|+|||++.+...
T Consensus 281 g~~VINmSlGg~-----~s~~l~~Ai~~A~~~GVlvVaAAGN~G~~~~~~sPA~~~~vItVGA~d~~~~~---------- 345 (692)
T 2p4e_P 281 GPLVVLLPLAGG-----YSRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQP---------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceEEEecCCCC-----CcHHHHHHHHHHHHCCCEEEEECCCCCCCCCccCcccCCCEEEEEEEcCCCCc----------
Confidence 899999999982 235667778889999999999999999754332 4456899999985321100
Q ss_pred EEEeeeeccCCCCceeeeEeecccccCCcCCCCCCCcCCCCCCCCCccceEEEEeeCCccchhhhHHHhhcCceEEEEEe
Q 008679 155 EIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGN 234 (557)
Q Consensus 155 ~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~gvi~~n 234 (557)
T Consensus 346 -------------------------------------------------------------------------------- 345 (692)
T 2p4e_P 346 -------------------------------------------------------------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcCCeeeec
Q 008679 235 SPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDITAP 314 (557)
Q Consensus 235 ~~~~~~~~~~~~~~ip~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~AP 314 (557)
...-+.||+||| ||||.||
T Consensus 346 -----------------------------------------------------a~~ss~fSn~G~--------~vDI~AP 364 (692)
T 2p4e_P 346 -----------------------------------------------------VTLGTLGTNFGR--------CVDLFAP 364 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----------------------------------------------------cccccccCCCCC--------ceeEEec
Confidence 000123899997 5699999
Q ss_pred CCcEEecccCCCCCCccccCccccceeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHccccccC
Q 008679 315 GLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKN 384 (557)
Q Consensus 315 G~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~ 384 (557)
|++|+++++... ..|..++|||||||||||++|||+|++|+|+|++||++|++||.+..
T Consensus 365 G~~I~St~~~~~-----------~~y~~~SGTSmAAPhVAG~aALlls~~P~ltp~qVk~~L~~tA~~~~ 423 (692)
T 2p4e_P 365 GEDIIGASSDCS-----------TCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKDV 423 (692)
T ss_dssp ----------------------------------------------------------------------
T ss_pred CCcEEeeccCCC-----------CceEeccchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhccccc
Confidence 999999997631 57899999999999999999999999999999999999999997653
No 34
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00 E-value=1.1e-33 Score=313.61 Aligned_cols=265 Identities=20% Similarity=0.172 Sum_probs=163.1
Q ss_pred CCCCchhhHHhhccCCCCCCCccCCCCCceeeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHH-HHHHHCCCcE
Q 008679 1 MDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAI-DDAIRDGVHV 79 (557)
Q Consensus 1 ~~GHGThVAgiiAG~~~~~~~~~~g~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~~~~~i~~ai-~~A~~~gvdV 79 (557)
++||||||||||||.. +. ..+.||||+|+|+.+|++++.+ .+...+++.|+ +++..++++|
T Consensus 112 ~~gHGThVAGiIAa~~---------n~-~g~~GVAp~A~l~~~rvl~~~~--------~~~~~~~~~a~~~~~~~~~~~I 173 (600)
T 3hjr_A 112 DTAHGTSVSGIIAAVD---------NA-IGTKGIAPRAQLQGFNLLDDNS--------QQLQKDWLYALGDSNASRDNRV 173 (600)
T ss_dssp TCCHHHHHHHHHHCCS---------SS-SSCCCSSTTCEEEEECTTSTTC--------CCCHHHHHHHTTSSHHHHTCSE
T ss_pred CCChHHHHHHHHhEeC---------CC-CCcEEeCCCCEEEEEEeecCCC--------CccHHHHHHHhhhhhhhcCCCE
Confidence 3699999999999861 11 1247999999999999998776 36777777765 6788899999
Q ss_pred EEEecCCCCCCCCCcchH-----HHHHHH--HHhCCcEEEEecCCCCCCCCCCCCCCCceEEecccccCcceeeeEEeCC
Q 008679 80 LSISIGTNQPFAFNRDGI-----AIGALN--AVKHNILVACSAGNSGPAPSSLSNLAPWLITVGAGSLDRDFVGPVVLGT 152 (557)
Q Consensus 80 In~SlG~~~~~~~~~~~~-----~~a~~~--a~~~Gv~vV~AAGN~G~~~~~~~~~ap~vitVga~~~~~~~~~~~~~~~ 152 (557)
||+|||.........+.. ..++.. ...+|+++|+||||.+....... . .+.+ .++
T Consensus 174 ~n~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~AaGNg~~~~~~~~-----~-~~~~------------~g~ 235 (600)
T 3hjr_A 174 FNQSYGMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGG-----Y-VLNR------------TGN 235 (600)
T ss_dssp EEECCCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETT-----E-EEEE------------ESS
T ss_pred EecccCccccCCccCCcchhhhHHHHHHHhhhccCCcEEEEeccCccccccccc-----c-cccc------------CCC
Confidence 999999843222222222 222222 23689999999999874210000 0 0000 000
Q ss_pred CcEEEeeeeccCCCCceeeeEeecccccCCcCCCCCCCcCCCCCCCCCccceEEEEeeCCccchhhhHHHhhcCceEEEE
Q 008679 153 GMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLIL 232 (557)
Q Consensus 153 ~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~gvi~ 232 (557)
+ .......|.- +..
T Consensus 236 ~------------------------------~~~~~~~~~~---d~~--------------------------------- 249 (600)
T 3hjr_A 236 G------------------------------PKLPFENSNL---DPS--------------------------------- 249 (600)
T ss_dssp C------------------------------CCCCSSBTTS---SGG---------------------------------
T ss_pred C------------------------------CCCCcccccc---cCc---------------------------------
Confidence 0 0000000100 000
Q ss_pred EeCCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcCCeee
Q 008679 233 GNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDIT 312 (557)
Q Consensus 233 ~n~~~~~~~~~~~~~~ip~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~ 312 (557)
....+.| .+......+.++.||++|+.. +++
T Consensus 250 ----------~~~~~~I-------------------------------sVgA~~~~g~~a~yS~~G~~v--------~~~ 280 (600)
T 3hjr_A 250 ----------NSNFWNL-------------------------------VVSALNADGVRSSYSSVGSNI--------FLS 280 (600)
T ss_dssp ----------GGSSSEE-------------------------------EEEEECTTSSBCTTCCBCTTC--------CEE
T ss_pred ----------cccCcce-------------------------------EEeeecCCCCEeecccCCcce--------eec
Confidence 0000000 011112247888999999976 788
Q ss_pred ecCCcE--------EecccCCCCCC-------------ccccCccccceeeeccccchhhhHHHHHHHHHhhCCCCCHHH
Q 008679 313 APGLNI--------LAAWSEASSPS-------------KLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAA 371 (557)
Q Consensus 313 APG~~I--------~sa~~~~~~~~-------------~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~s~~~ 371 (557)
|||..+ ....++..... ..........|..|+|||||||||||++|||+|+||+|+++|
T Consensus 281 apg~~~~~~~~~~vt~~~pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sGTSmAaP~VAGvaALll~a~P~lt~~~ 360 (600)
T 3hjr_A 281 ATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSGAMALLMSAYPDLSVRD 360 (600)
T ss_dssp EECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHHHHHHHHHHSTTSCHHH
T ss_pred cCCCCCCCCCcceeeecCCCccccccccCCccccccccccccCCCCCceeccccccccchhHHHHHHHHHHHCCCCCHHH
Confidence 888763 22222111000 001112235688999999999999999999999999999999
Q ss_pred HHHHHHccccccCCCCCcccC---------------------CCCCCCCCCeeeccccCccCcCCCC
Q 008679 372 IRSALMTTAWMKNNKALPITN---------------------ADGSIATPFSFGSGHFRPTKAADPG 417 (557)
Q Consensus 372 ik~~L~~TA~~~~~~g~~~~~---------------------~~~~~~~~~~~G~G~vn~~~A~~~~ 417 (557)
||++|++||++++....|+.. ..+.. -...||+|+||+.+|++.+
T Consensus 361 v~~~L~~TA~~~d~~~~p~~~~~~~~~~~~~~~~~~~~w~~N~aG~~-~s~~yGfG~vDA~~aV~~A 426 (600)
T 3hjr_A 361 LRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMW-FSPTYGFGLIDVNKALELA 426 (600)
T ss_dssp HHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCE-EBTTTBTCBCCHHHHHHHH
T ss_pred HHHHHHhhCccCCCCCCcccccccccccccccccccCCcccccCCce-EccccCCceecHHHHHHHh
Confidence 999999999998876554210 11111 2346899999999998743
No 35
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.86 E-value=3.2e-22 Score=207.08 Aligned_cols=99 Identities=15% Similarity=0.157 Sum_probs=75.7
Q ss_pred eecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHH-CCCcEEEEecCCCCCC---CCCcchHHHHHHHHHhCC
Q 008679 33 GGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIR-DGVHVLSISIGTNQPF---AFNRDGIAIGALNAVKHN 108 (557)
Q Consensus 33 GvAP~A~L~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~A~~-~gvdVIn~SlG~~~~~---~~~~~~~~~a~~~a~~~G 108 (557)
.+||+++++.|++.+... +..++++.+|++|++ ++++|||||||..... ......+..++.+|..+|
T Consensus 91 ~~aP~a~~~~~~~~~~~~---------~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~~~~~~~~~~~~~~~a~~~G 161 (372)
T 1ga6_A 91 SAGGAVQQLLFYMADQSA---------SGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQG 161 (372)
T ss_dssp HTTSCEEEEEEEEECTTS---------STTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTT
T ss_pred hcCCCCcEEEEEeCCCCC---------cccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCchHHHHHHHHHHHHHHHhCC
Confidence 478999999999976543 667889999999998 8999999999983210 112245666777788999
Q ss_pred cEEEEecCCCCCCCC-------------CCCCCCCceEEeccccc
Q 008679 109 ILVACSAGNSGPAPS-------------SLSNLAPWLITVGAGSL 140 (557)
Q Consensus 109 v~vV~AAGN~G~~~~-------------~~~~~ap~vitVga~~~ 140 (557)
|+||+|+||+|.... ..+...|+|++||+++.
T Consensus 162 itvv~AsGd~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~ 206 (372)
T 1ga6_A 162 QTFSVSSGDEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTL 206 (372)
T ss_dssp CEEEEECCSBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEE
T ss_pred cEEEEEECCCCCccccccCccCCccCCcCCCCCCCCeEEEEeeec
Confidence 999999999996531 12234699999999754
No 36
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.84 E-value=2.3e-21 Score=210.46 Aligned_cols=97 Identities=27% Similarity=0.403 Sum_probs=74.3
Q ss_pred eeeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHH---CCCcEEEEecCCCCCCCCC---cchHHHHHHH
Q 008679 30 TASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIR---DGVHVLSISIGTNQPFAFN---RDGIAIGALN 103 (557)
Q Consensus 30 ~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~~~~~i~~ai~~A~~---~gvdVIn~SlG~~~~~~~~---~~~~~~a~~~ 103 (557)
.+.||||+|+|+.|++. ...++++.+|++|++ ++++|||||||.... .+. ...+..++.+
T Consensus 273 ~~~gvAp~a~i~~~~~~-------------~~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e~-~~~~~~~~~~~~~~~~ 338 (552)
T 1t1e_A 273 VAGALAPGAKIAVYFAP-------------NTDAGFLNAITTAVHDPTHKPSIVSISWGGPED-SWAPASIAAMNRAFLD 338 (552)
T ss_dssp HHHHHCTTSEEEEEECC-------------SSHHHHHHHHHHHHTCTTTCCSEEEECEEEEGG-GSCHHHHHHHHHHHHH
T ss_pred hhhccCCCCeEEEEEcC-------------CCCchHHHHHHHHHhcccCCCCEEEecccCCcc-cCCHHHHHHHHHHHHH
Confidence 35799999999999972 335679999999998 799999999998321 111 2345666777
Q ss_pred HHhCCcEEEEecCCCCCCCC------C--CCCCCCceEEeccccc
Q 008679 104 AVKHNILVACSAGNSGPAPS------S--LSNLAPWLITVGAGSL 140 (557)
Q Consensus 104 a~~~Gv~vV~AAGN~G~~~~------~--~~~~ap~vitVga~~~ 140 (557)
|..+||+||+||||+|.... + .+...|+|++||+++.
T Consensus 339 a~~~Gi~vv~AsGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~ 383 (552)
T 1t1e_A 339 AAALGVTVLAAAGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRL 383 (552)
T ss_dssp HHHTTCEEEEECCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEE
T ss_pred HHhCCeEEEEecCCCCCCCCCCCCcccccCcccCCCEEEEecccc
Confidence 88999999999999996432 2 2334699999999754
No 37
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=98.99 E-value=2.4e-09 Score=99.18 Aligned_cols=94 Identities=22% Similarity=0.155 Sum_probs=75.4
Q ss_pred CCCCcCCCCCCCCC-------ccceEEEEeeCC-ccchhhhHHHhhcCceEEEEEeCCCCCCc---cc-cCCCcccEEEE
Q 008679 187 ETNQCLPGSLTPEK-------VKGKIVLCMRGS-GFKLSKGMEVKRAGGVGLILGNSPANGNE---YS-YDAHYLPATAV 254 (557)
Q Consensus 187 ~~~~c~~~~~~~~~-------~~gkivl~~~g~-~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~---~~-~~~~~ip~~~i 254 (557)
....|.+..+.... .++||+|++||. |+|.+|+.+|+++||.++|+||+...+.. +. .....||+++|
T Consensus 82 ~~~GC~~~~~~~~~~~~~~~~~~gkIaLV~RG~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~~~~IPsv~I 161 (194)
T 3icu_A 82 ALNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMI 161 (194)
T ss_dssp CTTCCSTTCCBCCCBCTTSSCBCCEEEEEESCTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCTTCCSSEEEEE
T ss_pred CcCCCCCCccccCCcccccccCCCeEEEEECCCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCCCCCceeEEEE
Confidence 45689987653222 478999999999 99999999999999999999998532221 11 12357999999
Q ss_pred ehhhHHHHHHHHhcCCCceEEEEece
Q 008679 255 LYDDAIKIHEYIKSTNNPTAIIKQAR 280 (557)
Q Consensus 255 ~~~~g~~l~~~~~~~~~~~~~i~~~~ 280 (557)
+.++|+.|++++.++...+++|....
T Consensus 162 s~~~G~~L~~~L~~G~~Vtvti~vg~ 187 (194)
T 3icu_A 162 GNLKGTKILQSIQRGIQVTMVIEVGK 187 (194)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHCCCeEEEEEECCC
Confidence 99999999999999988888887654
No 38
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=98.92 E-value=2.5e-09 Score=115.21 Aligned_cols=76 Identities=18% Similarity=0.253 Sum_probs=50.0
Q ss_pred HHHHHHHHH--HCCCcEEEEecCCCCCC--CCCcchHHHHHHHHHhCCcEEEEecCCCCCCCC----------CCCCCCC
Q 008679 65 MLAAIDDAI--RDGVHVLSISIGTNQPF--AFNRDGIAIGALNAVKHNILVACSAGNSGPAPS----------SLSNLAP 130 (557)
Q Consensus 65 i~~ai~~A~--~~gvdVIn~SlG~~~~~--~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~----------~~~~~ap 130 (557)
++..+++.. .+-++|||||||..... ..+...+...+..+..+||.|++|+||+|.... ..+...|
T Consensus 285 ~l~~l~~l~~~~~~~~ViS~S~G~~e~~~~~~y~~~~~~~~~~~~~~Gitv~~ASGD~G~~~~~~~~~~~~~~~~Pas~P 364 (544)
T 3edy_A 285 FLQWLMLLSNESALPHVHTVSYGDDEDSLSSAYIQRVNTELMKAAARGLTLLFASGDSGAGCWSVSGRHQFRPTFPASSP 364 (544)
T ss_dssp HHHHHHHHTTCSSCCSEEEEECCEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEECCSSTTBCEEETTEEECCCEETTTCT
T ss_pred HHHHHHHHhccCCCCcEEEecCCCcccccCHHHHHHHHHHHHHHHhCCeEEEEecCCCCccccCCCCCccccCCCcCCCC
Confidence 444444433 35689999999993211 011123445566788999999999999996432 2334469
Q ss_pred ceEEeccccc
Q 008679 131 WLITVGAGSL 140 (557)
Q Consensus 131 ~vitVga~~~ 140 (557)
||++||+++.
T Consensus 365 ~VtaVGgT~l 374 (544)
T 3edy_A 365 YVTTVGGTSF 374 (544)
T ss_dssp TSEEEEEEEE
T ss_pred cEEEEeeeec
Confidence 9999998754
No 39
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=97.37 E-value=0.00044 Score=72.50 Aligned_cols=74 Identities=18% Similarity=0.261 Sum_probs=60.3
Q ss_pred CCCCCCCccceEEEEeeCCccchhhhHHHhhcCceEEEEEeCCCCCCc--cc-cCCCcccEEEEehhhHHHHHHHHh
Q 008679 194 GSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNE--YS-YDAHYLPATAVLYDDAIKIHEYIK 267 (557)
Q Consensus 194 ~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~--~~-~~~~~ip~~~i~~~~g~~l~~~~~ 267 (557)
.++...+++|||||++++.|.|..|..+|+++||.|+|++++...... +. .....||...|+.++++.|++++.
T Consensus 106 ~D~~~~dv~GkIvlv~~g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~~~~~~~IP~~~Is~~~a~~L~~~l~ 182 (421)
T 2ek8_A 106 ADVAGKDLNGKIALIQRGNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLGGSDASFVAAVGITKQEGDALAANLR 182 (421)
T ss_dssp TTTTTSCCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCSSCCTTCCEEEEECHHHHHHHHHHHH
T ss_pred hhcCCCCcCceEEEEeCCCCCHHHHHHHHHHCCCeEEEEEeCCCcccccccCCCCCCCccEEEeCHHHHHHHHHHhh
Confidence 344455899999999999999999999999999999999998532211 11 135679999999999999999984
No 40
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=96.99 E-value=0.0027 Score=66.96 Aligned_cols=82 Identities=18% Similarity=0.255 Sum_probs=61.7
Q ss_pred CCCccceEEEEeeCCcc---------chhh----hHHHhhcCceEEEEEeCCCCCCc--------cccCCCcccEEEEeh
Q 008679 198 PEKVKGKIVLCMRGSGF---------KLSK----GMEVKRAGGVGLILGNSPANGNE--------YSYDAHYLPATAVLY 256 (557)
Q Consensus 198 ~~~~~gkivl~~~g~~~---------~~~k----~~~~~~~Ga~gvi~~n~~~~~~~--------~~~~~~~ip~~~i~~ 256 (557)
..+++|||||++++.|. +..| ..+|.++||+|+|++++...... .......||++.|+.
T Consensus 124 ~~dvkGKIVlv~~~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~~~~~~~~tg~~~~~~~~~~IP~~~Is~ 203 (444)
T 3iib_A 124 AGSLNDKIAFIDAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGTDHDRMAHTGMMRYEEGVTAIPAAAISN 203 (444)
T ss_dssp TTTTTTCEEEECCCCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCSCCSSCCCCCBCCCCTTSCCCCEEEECH
T ss_pred ccccCccEEEEeCCCCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccCCcccccccCCccccCCCCCCCCeEEecH
Confidence 46899999999999884 3344 45799999999999997432211 111246799999999
Q ss_pred hhHHHHHHHHhcCCCceEEEEec
Q 008679 257 DDAIKIHEYIKSTNNPTAIIKQA 279 (557)
Q Consensus 257 ~~g~~l~~~~~~~~~~~~~i~~~ 279 (557)
++++.|++.+..+...++++...
T Consensus 204 ~da~~L~~~l~~g~~~~v~l~~~ 226 (444)
T 3iib_A 204 PDADLINAMLKRDKEVVISLELG 226 (444)
T ss_dssp HHHHHHHHHHTTTCCCEEEEEEE
T ss_pred HHHHHHHHHHhCCCCeEEEEEEe
Confidence 99999999998877666665543
No 41
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=96.86 E-value=0.0017 Score=71.28 Aligned_cols=69 Identities=16% Similarity=0.201 Sum_probs=55.8
Q ss_pred CCccceEEEEeeCCccchhhhHHHhhcCceEEEEEeCCCCCC------------------ccc----------------c
Q 008679 199 EKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGN------------------EYS----------------Y 244 (557)
Q Consensus 199 ~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~------------------~~~----------------~ 244 (557)
.+++|||||+++|.|.|..|..+|+++||.|+|+|++..... ... .
T Consensus 128 vdv~GkIvlv~~g~~~~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~~~~~G~~~~~~Gdp~tpg~ps~~~~~~~~~~~~ 207 (640)
T 3kas_A 128 TPVNGSIVIVRAGKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFFGHAHLGTGDPYTPGFPSFNHTQFPPSRSS 207 (640)
T ss_dssp SCCTTSEEEEESCSSCHHHHHHHHHTTTCSEEEEECCTTTCCCSCTTCCCCEECCSSSSCSCCCSSCC---CCCCCCSSC
T ss_pred cccCCcEEEEecCCCCHHHHHHHHHHCCCeEEEEEeccccccccccccccccccccCCCCCCCCCccccccccccccccc
Confidence 589999999999999999999999999999999999753210 000 0
Q ss_pred CCCcccEEEEehhhHHHHHHHHh
Q 008679 245 DAHYLPATAVLYDDAIKIHEYIK 267 (557)
Q Consensus 245 ~~~~ip~~~i~~~~g~~l~~~~~ 267 (557)
....||+..|+.++++.|++.+.
T Consensus 208 ~~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 208 GLPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp CCCSSCEEECCHHHHHHHHTTEE
T ss_pred CCCCCCEEecCHHHHHHHHHHcc
Confidence 12468999999999999988664
No 42
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=96.78 E-value=0.0012 Score=73.24 Aligned_cols=71 Identities=28% Similarity=0.433 Sum_probs=57.1
Q ss_pred CCCccceEEEEeeCCccchhhhHHHhhcCceEEEEEeCCC-----C--------------------------CCcccc--
Q 008679 198 PEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPA-----N--------------------------GNEYSY-- 244 (557)
Q Consensus 198 ~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~gvi~~n~~~-----~--------------------------~~~~~~-- 244 (557)
..+++|||||+++|.|.|.+|+.+|+++||+|+|+|++.. + |..+.+
T Consensus 150 ~~~v~GkIvlv~~G~~~~~~Kv~~A~~~GA~gviiy~dp~d~~~~g~~~yP~~~~~p~~~vqrGsv~~~~~~GDp~TPG~ 229 (707)
T 3fed_A 150 GINCTGKIVIARYGKIFRGNKVKNAMLAGAIGIILYSDPADYFAPEVQPYPKGWNLPGTAAQRGNVLNLNGAGDPLTPGY 229 (707)
T ss_dssp CCCCTTCEEEEECCSSCHHHHHHHHHHTTCSEEEEECCHHHHCCTTCCBTTTSSBCCTTCCCCCCCCCCTTCCSTTCTTS
T ss_pred CCCCCCeEEEEECCCCCHhHHHHHHHHCCCEEEEEEcCchhccccccccCCCCccCCCccccccceecccCCCCCCCCCC
Confidence 4689999999999999999999999999999999998621 0 000000
Q ss_pred ---------------CCCcccEEEEehhhHHHHHHHHhc
Q 008679 245 ---------------DAHYLPATAVLYDDAIKIHEYIKS 268 (557)
Q Consensus 245 ---------------~~~~ip~~~i~~~~g~~l~~~~~~ 268 (557)
....||++.|+.++++.|+..+..
T Consensus 230 ps~~~~~r~~~~~~~~~p~IP~~pIS~~da~~Ll~~l~g 268 (707)
T 3fed_A 230 PAKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLGG 268 (707)
T ss_dssp CCCTTCCCCCGGGCTTCCSSCEEEECHHHHHHHHHTBCB
T ss_pred cccCCCcccChhhccCCCCCCeEecCHHHHHHHHHHhcC
Confidence 125799999999999999998764
No 43
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.18 E-value=0.073 Score=45.17 Aligned_cols=52 Identities=13% Similarity=0.239 Sum_probs=43.9
Q ss_pred CceEEEEEEEEEcCCCCeEEEEEeeCCCccEEEEecceEEEcCCCcEEEEEEEEEeC
Q 008679 466 NGTVIVKRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRLG 522 (557)
Q Consensus 466 ~~~~t~~~tvtn~~~~~~ty~~~v~~~~g~~~~v~p~~~~~~~~g~~~~~~vt~~~~ 522 (557)
+.+.+.+++|+|.|+.+..|++.... -+++.|..-++ ++||++.++|+|.+.
T Consensus 40 ~~~~~~~~~l~N~g~~~~~f~~~~~~----~F~i~P~~g~L-~pg~~~~i~V~F~P~ 91 (122)
T 2ys4_A 40 KYSTQKILLVRNIGNKNAVFHIKTCR----PFSIEPAIGTL-NVGESMQLEVEFEPQ 91 (122)
T ss_dssp SSCEEEEEEEECCSSSCEEEEEECCT----TEEEESSEEEE-CTTCEEEEEEEECCS
T ss_pred CCeEEEEEEEEECCCCCEEEEEecCC----CeEEECCcCEE-CCCCEEEEEEEEEcC
Confidence 46788999999999999999887653 35568999988 579999999999996
No 44
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=91.51 E-value=2.8 Score=34.94 Aligned_cols=54 Identities=13% Similarity=0.052 Sum_probs=44.9
Q ss_pred eEEEEEEEEEcCCCCeEEEEEeeCCCccEEEEecceEEEcCCCcEEEEEEEEEeCc
Q 008679 468 TVIVKRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRLGS 523 (557)
Q Consensus 468 ~~t~~~tvtn~~~~~~ty~~~v~~~~g~~~~v~p~~~~~~~~g~~~~~~vt~~~~~ 523 (557)
...+++.+.|...++.+|+++++..+++.+. .|..+.+ +++|..++.|.+..++
T Consensus 32 ~N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~-g~~~i~v-~~g~~~~~~v~v~~~~ 85 (118)
T 2r39_A 32 ENTYTLKVINKTQQVQEYNLDVKGLNDVSWY-GKQTIQV-EPGEVLNLPMSLGADP 85 (118)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEESCSSCEEE-SCCEEEE-CTTCEEEEEEEEEECG
T ss_pred EEEEEEEEEECCCCCEEEEEEEeCCcccEEe-CCCcEEE-CCCCEEEEEEEEEECh
Confidence 4678899999999999999999987776653 3666877 5799999999999975
No 45
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=89.79 E-value=3.2 Score=35.84 Aligned_cols=89 Identities=10% Similarity=0.027 Sum_probs=60.3
Q ss_pred ceEEEEEEEEEcCCCCeEEEEEeeCC----CccEEEEecceEEEcCCCcEEEEEEEEEeCccccccc-CCCceEEEEEEE
Q 008679 467 GTVIVKRTVTNVGGSKSVYFFSAKPP----MGVSVKANPSILFFDHIGQKKSFTITVRLGSETTRQG-LTKQYVFGWYRW 541 (557)
Q Consensus 467 ~~~t~~~tvtn~~~~~~ty~~~v~~~----~g~~~~v~p~~~~~~~~g~~~~~~vt~~~~~~~~~~~-~~~~~~~G~l~~ 541 (557)
...+.+++++|.|.-+.+|++..... ..--++++|..-++ .+||+.+++|++..++...... ....-++.-|++
T Consensus 43 ~~~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L-~Pge~~~I~v~~~v~~~~~~~ln~g~~~l~diLvL 121 (140)
T 3qbt_B 43 QLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSGEDKIEDILVL 121 (140)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCHHHHHHHHHSSSCSCEEEEE
T ss_pred eeeeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCccccc-CCCCeeEEEEEEEEccCcccccccchhhhheeEEE
Confidence 46778899999999999999985421 12236678999888 5799999999999864200000 011223456665
Q ss_pred E-CCccEEEeEEEEEe
Q 008679 542 T-DGLHLVRSPMAVSF 556 (557)
Q Consensus 542 ~-~~~~~v~~P~~~~~ 556 (557)
. .++.+..+|+-..+
T Consensus 122 ~Ve~G~d~fI~v~g~~ 137 (140)
T 3qbt_B 122 HLDRGKDYFLTISGNY 137 (140)
T ss_dssp EETTSCEEEEEEEEEE
T ss_pred EeecCCcEEEEEeccc
Confidence 5 66778888887665
No 46
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=88.39 E-value=0.34 Score=50.63 Aligned_cols=31 Identities=23% Similarity=0.296 Sum_probs=26.4
Q ss_pred CCCCccccccCCCCCCCCCCCcCCeeeecCCcEEecccC
Q 008679 286 QPAPFMANFTSRGPNALDPYILKPDITAPGLNILAAWSE 324 (557)
Q Consensus 286 ~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~ 324 (557)
...+.++.||++||.. ||.|||++|+++++.
T Consensus 181 ~~~~~~~~~S~~g~~v--------dv~ApG~~i~s~~~~ 211 (441)
T 1y9z_A 181 DSNLDHAAFSQYTDQV--------EISGPGEAILSTVTV 211 (441)
T ss_dssp CTTCCBCTTSCCCTTE--------EEEEECSSEEEECST
T ss_pred CCCCCCCccccCCCce--------EEEeccCCeeccccC
Confidence 3457899999999854 999999999999874
No 47
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=86.47 E-value=1.4 Score=36.09 Aligned_cols=56 Identities=9% Similarity=0.122 Sum_probs=43.4
Q ss_pred CceEEEEEEEEEcCCCCeEEEEEeeC-CCccEEEEecceEEEcCCCcEEEEEEEEEeC
Q 008679 466 NGTVIVKRTVTNVGGSKSVYFFSAKP-PMGVSVKANPSILFFDHIGQKKSFTITVRLG 522 (557)
Q Consensus 466 ~~~~t~~~tvtn~~~~~~ty~~~v~~-~~g~~~~v~p~~~~~~~~g~~~~~~vt~~~~ 522 (557)
....+.+++++|.|+.+..|+..... ..+...++.|..-.+ ++|++.+++|+|.+.
T Consensus 25 g~~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p~~g~i-~pg~~~~i~V~f~~~ 81 (112)
T 2e6j_A 25 GSAHCYEAILYNKGSIDALFNMTPPTSALGACFVFSPKEGII-EPSGVQAIQISFSSI 81 (112)
T ss_dssp SCCEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEESSEEEE-CTTBCCEEEEEECCC
T ss_pred CCEEEEEEEEEECCcceEEEEEecCCccccCcEEEECCcCEE-CCCCEEEEEEEEECC
Confidence 34677889999999999999984321 123346778999888 579999999999986
No 48
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=77.67 E-value=23 Score=39.15 Aligned_cols=89 Identities=16% Similarity=0.132 Sum_probs=48.3
Q ss_pred eEEEEEEEEEcCCCCeEE--EEEeeCCCcc-----EEEEecceEEEcCCCcEEEEEEEEEeCcccccccCCCceE--EEE
Q 008679 468 TVIVKRTVTNVGGSKSVY--FFSAKPPMGV-----SVKANPSILFFDHIGQKKSFTITVRLGSETTRQGLTKQYV--FGW 538 (557)
Q Consensus 468 ~~t~~~tvtn~~~~~~ty--~~~v~~~~g~-----~~~v~p~~~~~~~~g~~~~~~vt~~~~~~~~~~~~~~~~~--~G~ 538 (557)
..+++++|||+|+.+..- .+-+..|.+. +--.-=..+.+ ++||+++++++++..+-..-+...+.|+ .|.
T Consensus 614 ~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k~L~gF~kv~L-~pGes~~V~~~l~~~~ls~~d~~~~~w~ve~G~ 692 (713)
T 3zyz_A 614 VATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPKQLRGFAKLNL-TPGQSGTATFNIRRRDLSYWDTASQKWVVPSGS 692 (713)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSCEEEEEEEEEE-CTTCEEEEEEEEEGGGGCEEETTTTEEEECCEE
T ss_pred eEEEEEEEEeCCCCccceeeeeeeecCCCCCCchhHHhhhccccee-CCCCeEEEEEEEcHHHeeeeecCCCeEEEcCce
Confidence 578999999999865443 4445544321 11111123445 6899999999998753110001123443 365
Q ss_pred EEEE--CCccEEEeEEEEEeC
Q 008679 539 YRWT--DGLHLVRSPMAVSFA 557 (557)
Q Consensus 539 l~~~--~~~~~v~~P~~~~~~ 557 (557)
..+. .+.+++|+--.+.+|
T Consensus 693 y~v~vG~sS~d~~l~~~~~v~ 713 (713)
T 3zyz_A 693 FGISVGASSRDIRLTSTLSVA 713 (713)
T ss_dssp EEEEEESSSSCEEEEEEEEEC
T ss_pred EEEEEECCCCCcceeEEEEEC
Confidence 5433 345666665555443
No 49
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=76.04 E-value=30 Score=34.79 Aligned_cols=57 Identities=14% Similarity=0.130 Sum_probs=45.0
Q ss_pred CceEEEEEEEEEcCCCCeEEEEEeeCCCcc----EEEEecceEEEcCCCcEEEEEEEEEeCc
Q 008679 466 NGTVIVKRTVTNVGGSKSVYFFSAKPPMGV----SVKANPSILFFDHIGQKKSFTITVRLGS 523 (557)
Q Consensus 466 ~~~~t~~~tvtn~~~~~~ty~~~v~~~~g~----~~~v~p~~~~~~~~g~~~~~~vt~~~~~ 523 (557)
....+-++|++|.|.-..+|++.-...... =++++|..-++ .+||+++++|++.++.
T Consensus 45 ~~~~~~~l~i~N~g~~pa~f~f~~~~~~~~~~~~wl~v~p~~g~l-~Pge~~~i~l~~~v~~ 105 (366)
T 3qis_A 45 RQLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSK 105 (366)
T ss_dssp TCCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCT
T ss_pred CCeEEEEEEEEecCCceEEEEEEeCCCCCCCCCCcEEEeCCccEE-CCCCEEEEEEEEEECH
Confidence 356788899999999999999965432222 26788999888 5799999999998874
No 50
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=72.91 E-value=19 Score=33.36 Aligned_cols=79 Identities=9% Similarity=0.030 Sum_probs=49.2
Q ss_pred ceEEEEEEEEEcCCCCeEEEEEeeCCCccEEEEecceEEEcCCCcEEEEEEEEEeCcccccccCCCceEEEEEEEE--C-
Q 008679 467 GTVIVKRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRLGSETTRQGLTKQYVFGWYRWT--D- 543 (557)
Q Consensus 467 ~~~t~~~tvtn~~~~~~ty~~~v~~~~g~~~~v~p~~~~~~~~g~~~~~~vt~~~~~~~~~~~~~~~~~~G~l~~~--~- 543 (557)
...+.+++++|.|+.+.+++.... |.-+++...|.. + ++||+.+++|++... ....-....+.|+.. +
T Consensus 19 ~~~~~~~~i~N~g~~pl~i~~~~~-p~~~~~~~~~~~--I-~PG~~g~I~vt~~~~-----~~~~~G~~~~~i~v~~~~~ 89 (220)
T 2qsv_A 19 DEGVVRLVVNNTDESDLQVAVVSL-PSFVSLDDRAFR--L-QAREPRELNLSLAVP-----RNMPPGMKDEPLVLEVTSP 89 (220)
T ss_dssp CCCEEEEEEEECSSSCEEEEEEEC-CTTEECSCCEEE--E-CSSSCEEEEEEECCC-----TTCCSEEEEEEEEEEEECT
T ss_pred CcceEEEEEEeCCCCceEEEeccC-CCceEeeeCcce--e-CCCCceEEEEEEcch-----hcccCCceeeEEEEEEEcC
Confidence 456678899999998888886533 555554444444 4 579999999999886 222223335555543 3
Q ss_pred -C-c-cEEEeEEEE
Q 008679 544 -G-L-HLVRSPMAV 554 (557)
Q Consensus 544 -~-~-~~v~~P~~~ 554 (557)
+ . ...++|+..
T Consensus 90 ~~~~~~~~~i~v~g 103 (220)
T 2qsv_A 90 ETGKKAVDSVMVSL 103 (220)
T ss_dssp TTCCEEEEEEEEEE
T ss_pred CCCcccccEEEEEE
Confidence 2 2 234666543
No 51
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=71.26 E-value=15 Score=30.99 Aligned_cols=53 Identities=17% Similarity=0.041 Sum_probs=36.0
Q ss_pred CceEEEEEEEEEcCCCC-eEEEEEeeCCCccEEEEecceEEEcCCCcEEEEEEEEEeC
Q 008679 466 NGTVIVKRTVTNVGGSK-SVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRLG 522 (557)
Q Consensus 466 ~~~~t~~~tvtn~~~~~-~ty~~~v~~~~g~~~~v~p~~~~~~~~g~~~~~~vt~~~~ 522 (557)
+...+++++|+|.|..+ ..|++++-. +|-.+.-. .+.+ ++|++++|+++....
T Consensus 32 G~~~ti~vtV~N~G~~~a~~~~V~lyv-ng~~v~t~--~v~L-a~G~s~tv~f~~~~~ 85 (127)
T 3idu_A 32 NKLAEYEVHVKNLGGIGVPSTKVRVYI-NGTLYKNW--TVSL-GPKEEKVLTFNWTPT 85 (127)
T ss_dssp TCCEEEEEEEEECSSSCEEEEEEEEEE-TTEEEEEE--EEEE-CTTCEEEEEEEECCS
T ss_pred CCEEEEEEEEEECCCCccCCcEEEEEE-CCEEEeeE--Eecc-CCCCeEEEEEEEEcC
Confidence 46799999999999754 667777544 34444322 3455 578888888877653
No 52
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=67.10 E-value=41 Score=27.96 Aligned_cols=71 Identities=7% Similarity=-0.095 Sum_probs=43.8
Q ss_pred CceEEEEEEEEEcCCCCeE--------EEEEeeCCCccEEEE---------ecceEEEcCCCcEEEEEEEEEeCcccccc
Q 008679 466 NGTVIVKRTVTNVGGSKSV--------YFFSAKPPMGVSVKA---------NPSILFFDHIGQKKSFTITVRLGSETTRQ 528 (557)
Q Consensus 466 ~~~~t~~~tvtn~~~~~~t--------y~~~v~~~~g~~~~v---------~p~~~~~~~~g~~~~~~vt~~~~~~~~~~ 528 (557)
.+...++++|+|.++.+.+ |.+.+...+|-.|.- -....++ ++||+++|+.++... .
T Consensus 17 g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl-~pGE~~~f~~~w~~~-----~ 90 (120)
T 3isy_A 17 PEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTL-ESGETYDFSDVWKEV-----P 90 (120)
T ss_dssp SSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEE-CTTCEEEEEEEESSC-----C
T ss_pred CCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEE-CCCCEEEEEEEeCCC-----C
Confidence 4578899999999986544 344454445555441 1223456 689999999998842 1
Q ss_pred cCCCceEEEEEEEE
Q 008679 529 GLTKQYVFGWYRWT 542 (557)
Q Consensus 529 ~~~~~~~~G~l~~~ 542 (557)
.+....+.++|+-+
T Consensus 91 ~pG~Ytl~a~l~~~ 104 (120)
T 3isy_A 91 EPGTYEVKVTFKGR 104 (120)
T ss_dssp CSEEEEEEEEECCE
T ss_pred CCccEEEEEEEEee
Confidence 23334466666543
No 53
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=65.85 E-value=19 Score=30.15 Aligned_cols=53 Identities=11% Similarity=0.115 Sum_probs=43.6
Q ss_pred ceEEEEEEEEEcCCCCeEEEEEeeCCCccEEEEecceEEEcCCCcEEEEEEEEEeC
Q 008679 467 GTVIVKRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRLG 522 (557)
Q Consensus 467 ~~~t~~~tvtn~~~~~~ty~~~v~~~~g~~~~v~p~~~~~~~~g~~~~~~vt~~~~ 522 (557)
...+-.++|+|.++....|.++-..|.- ..|.|..=.+ +++++.++.|++...
T Consensus 27 ~~~~~~l~L~N~s~~~vaFKVKTT~p~~--y~VrP~~G~i-~P~~s~~v~V~~~~~ 79 (128)
T 1z9l_A 27 DVVTTNLKLQNPSDRKVCFKVKTTAPRR--YCVRPNSGVI-DPGSIVTVSVMLQPF 79 (128)
T ss_dssp SCEEEEEEEECCSSSCEEEEEEESCGGG--EEEESCEEEE-CTTCEEEEEEEECCC
T ss_pred ceEEEEEEEECCCCCeEEEEEECCCCCc--eEEeCCCcEE-CCCCeEEEEEEECcC
Confidence 4567789999999999999999888854 5568887666 679999999998874
No 54
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=65.80 E-value=29 Score=28.67 Aligned_cols=51 Identities=14% Similarity=0.121 Sum_probs=41.3
Q ss_pred EEEEEEEEEcCCCCeEEEEEeeCCCccEEEEecceEEEcCCCcEEEEEEEEEeC
Q 008679 469 VIVKRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRLG 522 (557)
Q Consensus 469 ~t~~~tvtn~~~~~~ty~~~v~~~~g~~~~v~p~~~~~~~~g~~~~~~vt~~~~ 522 (557)
.+.+++|+|.++....|.++-..|.- ..|.|..=.+ ++|++.++.|+....
T Consensus 25 g~~~l~L~N~t~~~vAFKVKtT~p~~--YrVrP~~G~I-~Pg~~~~I~I~~q~~ 75 (116)
T 1m1s_A 25 GNSTHNITSESDSRLAFKVKSSNNEH--YRVRPVYGFV-DAKGKSKLDINRLPG 75 (116)
T ss_dssp EEEEEEEEECSSSEEEEEEEESCTTT--EEEECSEEEE-CTTCEEEEEEEECSC
T ss_pred CEEEEEEECCCCCeEEEEEEecCCCc--eEEcCCceEE-CCCCeEEEEEEeCCC
Confidence 36788999999999999998887754 5567887655 679999999998875
No 55
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=60.34 E-value=23 Score=29.69 Aligned_cols=52 Identities=12% Similarity=0.124 Sum_probs=42.6
Q ss_pred eEEEEEEEEEcCCCCeEEEEEeeCCCccEEEEecceEEEcCCCcEEEEEEEEEeC
Q 008679 468 TVIVKRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRLG 522 (557)
Q Consensus 468 ~~t~~~tvtn~~~~~~ty~~~v~~~~g~~~~v~p~~~~~~~~g~~~~~~vt~~~~ 522 (557)
..+-.++|+|.++....|.++-..|.- ..|.|..=.+ .++|+..+.|++...
T Consensus 26 ~~~~~l~l~N~s~~~vaFKVKTT~p~~--y~VrP~~Gii-~P~~s~~v~V~~q~~ 77 (126)
T 1msp_A 26 KHTYHIKITNAGGRRIGWAIKTTNMRR--LSVDPPCGVL-DPKEKVLMAVSCDTF 77 (126)
T ss_dssp CCCEEEEEEECSSSCEEEEEEESCTTT--EEEESCEEEE-CTTCEEEEEEEECCC
T ss_pred ceEEEEEEECCCCCeEEEEEEcCCCCc--EEEECCCeEE-CCCCEEEEEEEecCC
Confidence 355678999999999999999888865 4567887766 579999999998874
No 56
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=59.85 E-value=25 Score=30.61 Aligned_cols=52 Identities=15% Similarity=0.121 Sum_probs=43.0
Q ss_pred eEEEEEEEEEcCCCCeEEEEEeeCCCccEEEEecceEEEcCCCcEEEEEEEEEeC
Q 008679 468 TVIVKRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRLG 522 (557)
Q Consensus 468 ~~t~~~tvtn~~~~~~ty~~~v~~~~g~~~~v~p~~~~~~~~g~~~~~~vt~~~~ 522 (557)
..+-.++|+|.++....|.++-..|.- ..|.|..=.+ .++++++++|++...
T Consensus 36 ~~~~~l~L~N~s~~~VaFKVKTT~p~~--y~VrP~~GiI-~P~~s~~V~V~lq~~ 87 (152)
T 1wic_A 36 EKKTLIVLTNVTKNIVAFKVRTTAPEK--YRVKPSNSSC-DPGASIDIIVSPHGG 87 (152)
T ss_dssp CCCEEEEEEBCSSSCEEEEEEESCTTT--EEEESSEEEE-CTTCEEEEEEEECSS
T ss_pred eEEEEEEEEcCCCCeEEEEEECCCCCc--eeecCCCcEE-CCCCeEEEEEEecCc
Confidence 445688999999999999999888864 5568988766 579999999999774
No 57
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=59.55 E-value=32 Score=28.05 Aligned_cols=50 Identities=20% Similarity=0.224 Sum_probs=40.7
Q ss_pred EEEEEEEEcCCCCeEEEEEeeCCCccEEEEecceEEEcCCCcEEEEEEEEEeC
Q 008679 470 IVKRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRLG 522 (557)
Q Consensus 470 t~~~tvtn~~~~~~ty~~~v~~~~g~~~~v~p~~~~~~~~g~~~~~~vt~~~~ 522 (557)
+.+++|+|.++....|.++-..|.- ..|.|..=.+ ++|++.++.|+....
T Consensus 18 ~~~l~L~N~t~~~vaFKVKtT~p~~--y~VrP~~G~I-~P~~~~~i~I~~q~~ 67 (109)
T 1row_A 18 SSTHKLVNGGAEKIVFKIKSSNNNE--YRIAPVFGFV-DPSGSKDVVITRTAG 67 (109)
T ss_dssp EEEEEEEECSSSCEEEEEEESCSSS--EEEECSEEEE-CTTEEEEEEEEECSC
T ss_pred eEEEEEEcCCCCeEEEEEEeCCCCc--eEEcCCceEE-CCCCeEEEEEEeCCC
Confidence 4678899999999999999887754 5567887656 679999999988774
No 58
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=55.45 E-value=23 Score=30.49 Aligned_cols=53 Identities=11% Similarity=0.120 Sum_probs=43.1
Q ss_pred ceEEEEEEEEEcCCCCeEEEEEeeCCCccEEEEecceEEEcCCCcEEEEEEEEEeC
Q 008679 467 GTVIVKRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRLG 522 (557)
Q Consensus 467 ~~~t~~~tvtn~~~~~~ty~~~v~~~~g~~~~v~p~~~~~~~~g~~~~~~vt~~~~ 522 (557)
...+-.++|+|.++....|.++-..|.- ..|.|..=.+ +++++.++.|++...
T Consensus 31 ~~~~~~l~L~N~s~~~VaFKVKTT~p~~--y~VrP~~GiI-~P~~s~~v~V~l~~~ 83 (147)
T 2cri_A 31 DVVTTNLKLQNPSDRKVCFKVKTTAPRR--YCVRPNSGII-DPGSIVTVSVMLQPF 83 (147)
T ss_dssp SCCCEEEEEECCSSSCEEEEEEESCTTS--EEEESSEEEC-CTTCEEEEEEEECCC
T ss_pred ceEEEEEEEECCCCCcEEEEEECCCCcc--EEEcCCCcEE-CCCCeEEEEEEECCC
Confidence 3456678999999999999999888865 5567887655 679999999998874
No 59
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=54.51 E-value=84 Score=33.44 Aligned_cols=63 Identities=19% Similarity=0.193 Sum_probs=42.8
Q ss_pred CCCeeEeecCCceEEEEEEEEEcCCCCeEE-EEEeeCCCccEEEEecceEEEcCCCcEEEEEEEEEeC
Q 008679 456 NYPSIAIPNLNGTVIVKRTVTNVGGSKSVY-FFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRLG 522 (557)
Q Consensus 456 n~ps~~~~~~~~~~t~~~tvtn~~~~~~ty-~~~v~~~~g~~~~v~p~~~~~~~~g~~~~~~vt~~~~ 522 (557)
..|.+.+.. .++.+++++|+|.+..+... ++++..+.+..+.. ....+ ++|++.++.++|+.+
T Consensus 363 ~~~~~~~~~-g~~~~~~~~vtn~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~g~~~t~~~~vt~~ 426 (601)
T 1w8o_A 363 TIPDVALEP-GQQVTVPVAVTNQSGIAVPKPSLQLDASPDWQVQG--SVEPL-MPGRQAKGQVTITVP 426 (601)
T ss_dssp ECCCEEECT-TCEEEEEEEEECCSSSCBSSCEEEEECCTTSEEEE--EECCB-CTTCEEEEEEEEECC
T ss_pred cCccceecC-CceeEEEEEEECCCceeccCceEEEecCCCcEEec--ccccc-CCCCceEEEEEEecC
Confidence 346666653 35789999999977543322 34456678888776 33444 568999998888887
No 60
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=52.95 E-value=29 Score=38.35 Aligned_cols=68 Identities=21% Similarity=0.398 Sum_probs=42.9
Q ss_pred CCCCCCeeEeecC-----CceEEEEEEEEEcCCCC--eEEEEEeeCCCccEEEEecc-------eE-EEcCCCcEEEEEE
Q 008679 453 LNLNYPSIAIPNL-----NGTVIVKRTVTNVGGSK--SVYFFSAKPPMGVSVKANPS-------IL-FFDHIGQKKSFTI 517 (557)
Q Consensus 453 ~~ln~ps~~~~~~-----~~~~t~~~tvtn~~~~~--~ty~~~v~~~~g~~~~v~p~-------~~-~~~~~g~~~~~~v 517 (557)
+-|.|.+|...++ .+..+++++|||+|+.+ .+-.+-+..|.+- +. .|. .+ .+ ++||++++++
T Consensus 596 ~GLSYTtF~ys~~~~~~~~~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~-~~-~P~k~L~gF~kv~~L-~pGes~~V~~ 672 (721)
T 2x41_A 596 YGLSYTTFEYSDLNVSFDGETLRVQYRIENTGGRAGKEVSQVYIKAPKGK-ID-KPFQELKAFHKTRLL-NPGESEEVVL 672 (721)
T ss_dssp CCBCSSCEEEEEEEEEECSSEEEEEEEEEECSSSCBCCEEEEEEECCCSS-SC-CCSCEEEEEEECCCB-CTTCEEEEEE
T ss_pred CCCCcceeEeeceEeecCCCeEEEEEEEEECCCCCCcEEeeEEEccCCCC-CC-CchHHhhcccccccC-CCCCeEEEEE
Confidence 4566666665543 24688999999999754 4445555555321 11 222 23 34 6899999999
Q ss_pred EEEeCc
Q 008679 518 TVRLGS 523 (557)
Q Consensus 518 t~~~~~ 523 (557)
++...+
T Consensus 673 ~l~~~~ 678 (721)
T 2x41_A 673 EIPVRD 678 (721)
T ss_dssp EEEGGG
T ss_pred EECHHH
Confidence 998753
No 61
>3e9t_A Na/Ca exchange protein; CBD1, CALX, membrane, transmembrane, membrane protein; 1.60A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=51.40 E-value=73 Score=25.93 Aligned_cols=64 Identities=14% Similarity=0.113 Sum_probs=33.2
Q ss_pred CCCeeEeecCCceEEEEEEEEEcCCCCeEEEEEee-----CCCccEEEEecceEEEcCCCc-EEEEEEEEEeC
Q 008679 456 NYPSIAIPNLNGTVIVKRTVTNVGGSKSVYFFSAK-----PPMGVSVKANPSILFFDHIGQ-KKSFTITVRLG 522 (557)
Q Consensus 456 n~ps~~~~~~~~~~t~~~tvtn~~~~~~ty~~~v~-----~~~g~~~~v~p~~~~~~~~g~-~~~~~vt~~~~ 522 (557)
.-+++.+.+..+..+++++.+. +...+-++.+. +..|........+|+|. +|| +++++|.+..+
T Consensus 8 ~~~~y~V~E~~g~~~v~V~R~g--~~~~~v~V~y~t~~gTA~~g~Dy~~~~g~l~F~-~Get~k~i~V~I~dD 77 (114)
T 3e9t_A 8 EPGHYTVMENCGEFEVRVVRRG--DISTYASVEYETQDGTASAGTDFVGRKGLLSFP-PGVDEQRFRIEVIDD 77 (114)
T ss_dssp SSSEEEEETTCCEEEEEEEEEE--CCSSCEEEEEEEECSSSCBTTTBCCCEEEEEEC-TTCCEEEEEEEBCCC
T ss_pred eCCEEEEEcCCeEEEEEEEEEC--CCCeeEEEEEEeECCccCCCCCceEcceEEEEe-CCcEEEEEEEEEEcC
Confidence 3356666654555554444443 33333333322 33455555556789995 455 46666655444
No 62
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=51.31 E-value=33 Score=38.69 Aligned_cols=67 Identities=15% Similarity=0.211 Sum_probs=41.8
Q ss_pred CCCCCCeeEee--cC---CceEEEEEEEEEcC-CCCeEE--EEEeeCCCc-c----EEEEecceEEEcCCCcEEEEEEEE
Q 008679 453 LNLNYPSIAIP--NL---NGTVIVKRTVTNVG-GSKSVY--FFSAKPPMG-V----SVKANPSILFFDHIGQKKSFTITV 519 (557)
Q Consensus 453 ~~ln~ps~~~~--~~---~~~~t~~~tvtn~~-~~~~ty--~~~v~~~~g-~----~~~v~p~~~~~~~~g~~~~~~vt~ 519 (557)
+-|.|.+|... ++ .+..+++++|||+| +.+..- .+-+..|.+ + +--.-=..+.+ ++||++++++++
T Consensus 716 ~GLSYTtF~ys~~~l~v~~~~~~v~v~V~NtG~~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~L-~pGes~~V~~~l 794 (845)
T 3abz_A 716 YGLSYTTFELDISDFKVTDDKIAISVDVKNTGDKFAGSEVVQVYFSALNSKVSRPVKELKGFEKVHL-EPGEKKTVNIDL 794 (845)
T ss_dssp CCBCSSCEEEEEEEEEECSSEEEEEEEEEECCSSCCEEEEEEEEEEESSCSSCCCSCEEEEEEEEEE-CTTCEEEEEEEE
T ss_pred CCCcceeEEEecccccccCCeEEEEEEEEECCcCCCcceeeeeeEeCCCCCcchhhheeccceeEEE-CCCCEEEEEEEe
Confidence 46777777766 44 35689999999999 755443 333443322 1 11111123455 689999999999
Q ss_pred E
Q 008679 520 R 520 (557)
Q Consensus 520 ~ 520 (557)
.
T Consensus 795 ~ 795 (845)
T 3abz_A 795 E 795 (845)
T ss_dssp E
T ss_pred C
Confidence 8
No 63
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=50.32 E-value=1.5e+02 Score=27.02 Aligned_cols=53 Identities=19% Similarity=0.097 Sum_probs=34.8
Q ss_pred ceEEEEEEEEEcCCCCeEEEEEeeCCCccEEEEecceEEEcCCCcEEEEEEEEEeC
Q 008679 467 GTVIVKRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRLG 522 (557)
Q Consensus 467 ~~~t~~~tvtn~~~~~~ty~~~v~~~~g~~~~v~p~~~~~~~~g~~~~~~vt~~~~ 522 (557)
...+.+++++|.|+.+...+ .+...-|-.. +.+..-.+ ++||+.+++|++...
T Consensus 134 ~~~~~~f~i~N~G~~pL~I~-~v~~scgct~-~~~~~~~i-~PGe~~~i~v~~~~~ 186 (220)
T 2qsv_A 134 ETTKAAIEIRNVGAGPLRLH-SVTTRNPALT-AVPDRTEI-KPGGSTLLRIAVDPQ 186 (220)
T ss_dssp SCEEEEEEEEECSSSCEEEE-EEEECSTTEE-EEESCSEE-CTTCEEEEEEEECHH
T ss_pred CeEEEEEEEEECCCCCEEEE-EEEeCCCCEe-eecCCccC-CCCCEEEEEEEEecC
Confidence 46778899999998877664 2333333322 22333334 579999999999875
No 64
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=49.39 E-value=13 Score=26.74 Aligned_cols=36 Identities=19% Similarity=0.158 Sum_probs=27.1
Q ss_pred cchhhhHHHHHHHHHhhCCCCCHHHHHHHHHccccc
Q 008679 347 SMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWM 382 (557)
Q Consensus 347 SMAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~ 382 (557)
|-..|..--....|++.||+++.+.|+.+|...-..
T Consensus 3 ~~~~~~~ee~l~~L~emFP~ld~~~I~~vL~a~~gd 38 (59)
T 1wgl_A 3 SGSSGCSEEDLKAIQDMFPNMDQEVIRSVLEAQRGN 38 (59)
T ss_dssp SCSSSSCHHHHHHHHHHCSSSCHHHHHHHHTTTTTC
T ss_pred CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHcCCC
Confidence 333444555677899999999999999999766543
No 65
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=35.93 E-value=6.8 Score=32.62 Aligned_cols=52 Identities=19% Similarity=0.183 Sum_probs=31.6
Q ss_pred EEEEEEEcCCCCeEEEEEee-CCCccEEEEecceEEEc-CCCcEEEEEEEEEeC
Q 008679 471 VKRTVTNVGGSKSVYFFSAK-PPMGVSVKANPSILFFD-HIGQKKSFTITVRLG 522 (557)
Q Consensus 471 ~~~tvtn~~~~~~ty~~~v~-~~~g~~~~v~p~~~~~~-~~g~~~~~~vt~~~~ 522 (557)
+.+-|++.+....+..+.++ .|.|+.+++.|..+++. ...++++|.|++...
T Consensus 57 ~~vDLs~l~~G~~~vpv~v~~lp~~v~v~v~P~~V~V~i~~~~~k~~pV~v~~~ 110 (119)
T 2kq1_A 57 VFVDLTEAGEGSHTVDVEHRGFPGDLAVTVEPRMARVQLEERQTVSVPVTVEMI 110 (119)
T ss_dssp EEEECTTCCBEEEEEECEEESSCTTSEEEESCCEEEEEEESCCCCCCCCCCCCC
T ss_pred EEEECccCCCCeEEEEEEEecCCCCeEEEEcCCEEEEEEEEEEEEEEEEEEEEC
Confidence 34445555533333334455 68899999999987664 234566777766553
No 66
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=34.66 E-value=1.2e+02 Score=25.50 Aligned_cols=64 Identities=16% Similarity=0.162 Sum_probs=32.6
Q ss_pred CCCCeeEeecCCceEEEEEEEEEcCCCCeEEEEEee-----CCCccEEEEecceEEEcCCCc-EEEEEEEEEe
Q 008679 455 LNYPSIAIPNLNGTVIVKRTVTNVGGSKSVYFFSAK-----PPMGVSVKANPSILFFDHIGQ-KKSFTITVRL 521 (557)
Q Consensus 455 ln~ps~~~~~~~~~~t~~~tvtn~~~~~~ty~~~v~-----~~~g~~~~v~p~~~~~~~~g~-~~~~~vt~~~ 521 (557)
+.-+++.+.+..+.. +++|+-.|+...+-++.+. +..|........+|+|. +|| +++++|.+..
T Consensus 9 F~~~~y~V~E~~g~~--~v~V~R~g~~~~~v~V~y~t~~gTA~~g~Dy~~~~g~l~F~-~Get~k~i~V~I~d 78 (137)
T 3ead_A 9 FEPGHYTVMENCGEF--EVRVVRRGDISTYASVEYETQDGTASAGTDFVGRKGLLSFP-PGVDEQRFRIEVID 78 (137)
T ss_dssp ESSCEEEEEGGGCEE--EEEEEEESCCSSCEEEEEEEECSSSCBTTTBCCCEEEEEEC-TTCCEEEEEEEBCC
T ss_pred EcCCEEEEECCCeEE--EEEEEEECCCCceEEEEEEeECCCcCCCCcEeEeeEEEEEC-CCceEEEEEEEEec
Confidence 444566666544444 4444444444333333332 33455554455678885 455 4666555543
No 67
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=33.57 E-value=1.4e+02 Score=24.39 Aligned_cols=24 Identities=21% Similarity=0.279 Sum_probs=16.9
Q ss_pred CceEEEEEEEEEcCCCC-eEEEEEe
Q 008679 466 NGTVIVKRTVTNVGGSK-SVYFFSA 489 (557)
Q Consensus 466 ~~~~t~~~tvtn~~~~~-~ty~~~v 489 (557)
+...+++.+|+|.|... ..+++.+
T Consensus 18 ~~~~ti~atVkN~G~~~a~~~~V~l 42 (114)
T 2l0d_A 18 NTVNTMTATIENQGNKDSTSFNVSL 42 (114)
T ss_dssp TSEEEEEEEEEECSSSCBCCEEEEE
T ss_pred CCeEEEEEEEEECCCCCCCCEEEEE
Confidence 46789999999999742 3344443
No 68
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=31.51 E-value=2e+02 Score=22.99 Aligned_cols=66 Identities=17% Similarity=0.041 Sum_probs=42.1
Q ss_pred eeEeecCCceEEEEEEEEEcCCCCeEEEEEeeCCCccEEEEecceEEEcCCCcEEEEEEEEEeCcccccccCCCceEEEE
Q 008679 459 SIAIPNLNGTVIVKRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRLGSETTRQGLTKQYVFGW 538 (557)
Q Consensus 459 s~~~~~~~~~~t~~~tvtn~~~~~~ty~~~v~~~~g~~~~v~p~~~~~~~~g~~~~~~vt~~~~~~~~~~~~~~~~~~G~ 538 (557)
.+.+.....-..+++|++|-......|.=.+..|.-+.+ .+ ...++-+|+|.+..+ ..++.|.
T Consensus 35 vlsV~F~~~~~~vTItItNe~TG~~VYs~~~s~p~~i~I-------dL-nge~sG~Y~IeI~~~---------~~~LtG~ 97 (101)
T 3sd2_A 35 ILNVSFGRAKDYAIITVTNKATGEIVHSKTYHNTSIVMI-------DM-SSCEKGEYTIHIILN---------DCLLEGT 97 (101)
T ss_dssp EEEEEESSCCSCEEEEEEETTTCCEEEEEEESSCSEEEE-------EC-TTSCSEEEEEEEEET---------TEEEEEE
T ss_pred EEEEEeccCCCcEEEEEEECCCCcEEEEEeccCCcEEEE-------Ec-CCCcCceEEEEEEeC---------CcEEEEE
Confidence 333433334456889999987778899887776542222 33 234577899988885 3566676
Q ss_pred EEE
Q 008679 539 YRW 541 (557)
Q Consensus 539 l~~ 541 (557)
++.
T Consensus 98 F~i 100 (101)
T 3sd2_A 98 FTV 100 (101)
T ss_dssp EEE
T ss_pred EEe
Confidence 543
No 69
>1ni7_A ER75, hypothetical protein YGDK; RD-structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: d.224.1.1
Probab=29.05 E-value=42 Score=29.29 Aligned_cols=31 Identities=23% Similarity=0.211 Sum_probs=26.2
Q ss_pred eccccchhhhHHHHHHHHHhhCCCCCHHHHHH
Q 008679 343 FSGTSMSCPHVAAAAALLKAIHPDWSSAAIRS 374 (557)
Q Consensus 343 ~sGTSMAaP~VAG~aALl~q~~p~~s~~~ik~ 374 (557)
+.|-| =|+.|-|.+|||.+.+-..+|+||.+
T Consensus 79 F~adS-DA~IvkGL~AlL~~~~~G~tp~eIl~ 109 (155)
T 1ni7_A 79 FFGDS-EGRIVRGLLAVLLTAVEGKTAAELQA 109 (155)
T ss_dssp CEEEE-SSHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred EeeCC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 33444 37999999999999999999999876
No 70
>3fso_A Integrin beta-4, GP150; immunoglobulin fold, cell adhesion, alternative splicing, disease mutation, epidermolysis bullosa, glycoprotein, membrane; 1.41A {Homo sapiens} SCOP: b.1.27.0 PDB: 3fq4_A 3h6a_A
Probab=28.19 E-value=1.3e+02 Score=24.75 Aligned_cols=65 Identities=11% Similarity=0.066 Sum_probs=34.2
Q ss_pred CCCCCeeEeecCCceEEEEEEEEEcCCCCeEEEEEe-----eCCCccEEEEecceEEEcCCCc-EEEEEEEEEe
Q 008679 454 NLNYPSIAIPNLNGTVIVKRTVTNVGGSKSVYFFSA-----KPPMGVSVKANPSILFFDHIGQ-KKSFTITVRL 521 (557)
Q Consensus 454 ~ln~ps~~~~~~~~~~t~~~tvtn~~~~~~ty~~~v-----~~~~g~~~~v~p~~~~~~~~g~-~~~~~vt~~~ 521 (557)
.+..+++.+.+..+ +++++|.-.++...+-++.+ .+..|........+|+|. +|| +++|+|.+-.
T Consensus 9 ~F~~~~y~V~E~~g--~~~v~V~R~gg~~g~v~V~y~T~dgTA~ag~Dy~~~~g~l~F~-~Get~k~i~V~I~d 79 (123)
T 3fso_A 9 SFEQPEFSVSRGDQ--VARIPVIRRVLDGGKSQVSYRTQDGTAQGNRDYIPVEGELLFQ-PGEAWKELQVKLLE 79 (123)
T ss_dssp EESCSEEEEEGGGS--EEEEEEEEESCCSSCEEEEEEEEESSSCBTTTBCCCEEEEEEC-TTCCEEEEEEEBCC
T ss_pred EEeCCEEEEEcCce--EEEEEEEEeCCCCceEEEEEEeeCCcEeCCccccccceEEEEC-CCCeEEEEEEEEEC
Confidence 34445666665444 34555554444333333332 234555655566789995 455 4666665544
No 71
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=27.79 E-value=1.9e+02 Score=27.08 Aligned_cols=66 Identities=8% Similarity=0.036 Sum_probs=40.4
Q ss_pred CCCCCCeeEeecCCceEEEEEEEEEcCCCCeEEEEEeeCCCccEEEEe-----cceEEEcCCCcEEEEEEEEEe
Q 008679 453 LNLNYPSIAIPNLNGTVIVKRTVTNVGGSKSVYFFSAKPPMGVSVKAN-----PSILFFDHIGQKKSFTITVRL 521 (557)
Q Consensus 453 ~~ln~ps~~~~~~~~~~t~~~tvtn~~~~~~ty~~~v~~~~g~~~~v~-----p~~~~~~~~g~~~~~~vt~~~ 521 (557)
.++|.|.+... ++...+..+|.|..+.....++.+...+++..... ...+.+ ++++++++...+.+
T Consensus 84 v~~~LP~sv~r--GE~~~l~~~V~Ny~~~~~~v~V~l~~~~~~~~~~~~~~~~~~~v~v-~a~~~~~v~f~i~p 154 (252)
T 3hrz_B 84 IDLQMPYSVVK--NEQVEIRAILHNYVNEDIYVRVELLYNPAFCSASTKGQRYRQQFPI-KALSSRAVPFVIVP 154 (252)
T ss_dssp EEECCCSCEET--TCCEEEEEEEEECSSSCEEEEEEECCCTTEEESCCSSCCEEEEEEE-CTTEEEEEEEEEEE
T ss_pred EEcCCCcEEee--CCEEEEEEEEEcccCceEEEEEEEEcCCceEeecCCCCceEEEEEE-CCCCeEEEEEEEEe
Confidence 35677766553 35688899999999888888888776554433211 112444 34555555555544
No 72
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=25.40 E-value=3.8e+02 Score=25.16 Aligned_cols=54 Identities=13% Similarity=0.040 Sum_probs=37.4
Q ss_pred ceEEEEEEEEEcCCCCeEEEEEeeCCC--------ccEEEEecceEEEcCCCcEEEEEEEEEe
Q 008679 467 GTVIVKRTVTNVGGSKSVYFFSAKPPM--------GVSVKANPSILFFDHIGQKKSFTITVRL 521 (557)
Q Consensus 467 ~~~t~~~tvtn~~~~~~ty~~~v~~~~--------g~~~~v~p~~~~~~~~g~~~~~~vt~~~ 521 (557)
+....+++|+|.++.+.-..+-++..+ ..-+.++|..+.+ ++++++.+.|....
T Consensus 42 ~~k~~sl~l~N~~~~P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl-~pg~~q~lRI~~~~ 103 (257)
T 3q48_A 42 SEREVTLRVSNTSGTPVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRV-EPNGGAVLRIAYLK 103 (257)
T ss_dssp TCSEEEEEEEECSSSCEEEEEEEESSCCSSCGGGGCCSEEEESSEEEE-CTTEEEEEEEEECC
T ss_pred CCcEEEEEEEeCCCCeEEEEEEEEcCCCccCcccccCCEEEcCCEEEE-CCCCceEEEEEECC
Confidence 345688999999876544444455321 2347889999999 57999999886554
No 73
>3g0m_A Cysteine desulfuration protein SUFE; YNHA, csgid, national I of allergy and infectious diseases, niaid, hydrolase, struc genomics; 1.76A {Salmonella typhimurium LT2} SCOP: d.224.1.1 PDB: 1mzg_A
Probab=24.81 E-value=40 Score=28.92 Aligned_cols=33 Identities=15% Similarity=0.139 Sum_probs=27.8
Q ss_pred eeeccccchhhhHHHHHHHHHhhCCCCCHHHHHH
Q 008679 341 TIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRS 374 (557)
Q Consensus 341 ~~~sGTSMAaP~VAG~aALl~q~~p~~s~~~ik~ 374 (557)
..+.|-| =|+.|-|.+|||.+.+-..+|+||.+
T Consensus 70 l~f~adS-DA~IvkGl~alL~~~~~G~tp~eIl~ 102 (141)
T 3g0m_A 70 IELQGDS-DAAIVKGLMAVVFILYHQMTAQDIVH 102 (141)
T ss_dssp EEEEEEE-SSHHHHHHHHHHHHHHTTCBHHHHHH
T ss_pred EEEEecC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 4455666 37999999999999999999999876
No 74
>2hr0_B Complement C3 alpha' chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2icf_B* 2wii_B* 2win_B* 3g6j_B 3l5n_B* 2a73_B* 2i07_B* 2xwj_B* 2xwb_B* 2a74_C* 2ice_C* 2qki_C* 3l3o_F* 3nms_C* 3nsa_C* 3ohx_C* 3t4a_C 2ice_B* 3l3o_B* 3nms_B* ...
Probab=24.30 E-value=1.3e+02 Score=34.10 Aligned_cols=67 Identities=10% Similarity=0.010 Sum_probs=47.4
Q ss_pred CCCCCCeeEeecCCceEEEEEEEEEcCC-CCeEEEEEeeCCCccEEEE-----ecceEEEcCCCcEEEEEEEEEeC
Q 008679 453 LNLNYPSIAIPNLNGTVIVKRTVTNVGG-SKSVYFFSAKPPMGVSVKA-----NPSILFFDHIGQKKSFTITVRLG 522 (557)
Q Consensus 453 ~~ln~ps~~~~~~~~~~t~~~tvtn~~~-~~~ty~~~v~~~~g~~~~v-----~p~~~~~~~~g~~~~~~vt~~~~ 522 (557)
.+++.|-+... ++...+..+|.|..+ ....++++++..+++.+.- .+..+++ ++++++++.+.+++.
T Consensus 83 v~~~LP~~v~~--GD~~~i~~~v~N~~~~~~~~v~v~l~~~~~~~~~~~~~~~~~~~v~l-~~~~~~~v~f~i~~~ 155 (915)
T 2hr0_B 83 IDLRLPYSVVR--NEQVEIRAVLYNYRQNQELKVRVELLHNPAFCSLATTKRRHQQTVTI-PPKSSLSVPYVIVPL 155 (915)
T ss_dssp EEEECCSEEET--TCCEEEEEEEEECCSSCCEEEEEEECCCTTEECSCCSSSCEEEEEEE-CTTEEEEEEEEEEEC
T ss_pred EEccCCCEEec--CcEEEEEEEEEcCCCCeeEEEEEEEecCCceEeecCCCCcceeEEEE-CCCCeEEEEEEEEEC
Confidence 35677766554 456889999999999 9999999988766655422 1245666 467777777777764
No 75
>2kut_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Geobacter metallireducens}
Probab=23.11 E-value=83 Score=26.17 Aligned_cols=55 Identities=18% Similarity=0.202 Sum_probs=31.1
Q ss_pred CceEEEEEEEEEcCCCC-eEEEEE--eeCC--CccEEEEecceEEEcCCCcEEEEEEEEEeC
Q 008679 466 NGTVIVKRTVTNVGGSK-SVYFFS--AKPP--MGVSVKANPSILFFDHIGQKKSFTITVRLG 522 (557)
Q Consensus 466 ~~~~t~~~tvtn~~~~~-~ty~~~--v~~~--~g~~~~v~p~~~~~~~~g~~~~~~vt~~~~ 522 (557)
+...+++.||+|.|... ....+. +..| .|..+...+ .-.+ ++|++.+++|++...
T Consensus 15 g~~vTvsatVkN~Gt~~s~a~~V~~yl~~p~~gg~~vgt~t-v~~L-aaG~s~t~~v~~~~~ 74 (122)
T 2kut_A 15 GEEITVSARVTNRGAAEAHNVPVAVYLGNPAQGGVEIGRDT-ISRI-PVGGTGLARVQWKAT 74 (122)
T ss_dssp TCEEEEEEEEECCSSSCBCCCCEEECSSCTTTCCCCCBCCC-CSCB-CTTCEEECCEEEECC
T ss_pred CCeEEEEEEEEeCCCcccCcEEEEEEeCCCccCCeEEeeEE-cccc-CCCCeEEEEEEEecC
Confidence 45789999999999642 222333 3332 122222111 1123 579999977777765
No 76
>4fxk_B Complement C4-A alpha chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_B*
Probab=22.84 E-value=93 Score=34.41 Aligned_cols=65 Identities=11% Similarity=0.134 Sum_probs=40.6
Q ss_pred CCCCCeeEeecCCceEEEEEEEEEcCCCCeEEEEEeeCCCccEEEEe---cceEEEcCCCcEEEEEEEEEe
Q 008679 454 NLNYPSIAIPNLNGTVIVKRTVTNVGGSKSVYFFSAKPPMGVSVKAN---PSILFFDHIGQKKSFTITVRL 521 (557)
Q Consensus 454 ~ln~ps~~~~~~~~~~t~~~tvtn~~~~~~ty~~~v~~~~g~~~~v~---p~~~~~~~~g~~~~~~vt~~~ 521 (557)
++|.|.+... ++...+..+|.|..+...+.+++++..+++.+... ...+.+ ++++++++.+.+.+
T Consensus 157 ~~~lP~~v~~--GD~~~i~~~V~N~~~~~~~v~v~l~~~~~~~~~~~~~~~~~~~v-~a~~~~~v~f~i~~ 224 (767)
T 4fxk_B 157 HLRLPMSVRR--FEQLELRPVLYNYLDKNLTVSVHVSPVEGLCLAGGGGLAQQVLV-PAGSARPVAFSVVP 224 (767)
T ss_dssp ECCCCSCEET--TCEEEECCEEEECSSSCEEEEEEECCCTTEECSSSSCCCEEEEE-CSSCEEECCEEEEE
T ss_pred ecCCCCeecc--CCEEEEEEEEEECCCCCEEEEEEEEecCCeEEecCCceeEEEEE-cCCCeEEEEEEEEE
Confidence 5677876554 45688889999999999999988876655543221 123444 34444444444433
No 77
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=22.50 E-value=2.2e+02 Score=34.13 Aligned_cols=67 Identities=12% Similarity=0.015 Sum_probs=47.7
Q ss_pred CCCCCCeeEeecCCceEEEEEEEEEcCCCCeEEEEEeeCCCccEEEEe---cceEEEcCCCcEEEEEEEEEeC
Q 008679 453 LNLNYPSIAIPNLNGTVIVKRTVTNVGGSKSVYFFSAKPPMGVSVKAN---PSILFFDHIGQKKSFTITVRLG 522 (557)
Q Consensus 453 ~~ln~ps~~~~~~~~~~t~~~tvtn~~~~~~ty~~~v~~~~g~~~~v~---p~~~~~~~~g~~~~~~vt~~~~ 522 (557)
.+++.|.+... ++...+..+|.|..+....++++++..+++.+.-. ..++.+ ++++++++.+.+.+.
T Consensus 771 v~~~LP~sv~r--GE~~~l~~~V~N~~~~~~~v~V~l~~~~~~~~~~~~~~~~~v~l-~~~~~~~v~f~v~p~ 840 (1451)
T 4acq_A 771 VELTMPYSVIR--GEAFTLKATVLNYLPKCIRVSVQLEASPAFLAVPVEKEQAPHCI-CANGRQTVSWAVTPK 840 (1451)
T ss_dssp EEEECCSEEES--SSCEEEEEEEEECSSSCEEEEEEECCCTTEEEEESCSCCCCEEE-CTTEEEEEEEEEEEC
T ss_pred EEccCCceEec--CCEEEEEEEEEeccCccEEEEEEEEcCCCeEeecCCCCceEEEE-CCCCeEEEEEEEEEC
Confidence 35677766554 35688999999999999999999987777665432 345777 457777776666653
No 78
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=20.79 E-value=1.4e+02 Score=24.61 Aligned_cols=21 Identities=14% Similarity=0.199 Sum_probs=10.9
Q ss_pred EEEEecceEEEcCCCcEEEEEE
Q 008679 496 SVKANPSILFFDHIGQKKSFTI 517 (557)
Q Consensus 496 ~~~v~p~~~~~~~~g~~~~~~v 517 (557)
.+...|+.|++ +.|++++|.+
T Consensus 15 ~~~F~P~~i~V-~~GdtV~f~~ 35 (123)
T 3erx_A 15 AMVFEPAFVRA-EPGDVINFVP 35 (123)
T ss_dssp EEEEESSEEEE-CTTEEEEEEE
T ss_pred cEeEeCCEEEE-CCCCEEEEEE
Confidence 34445666555 3455555544
No 79
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=20.59 E-value=1.8e+02 Score=23.18 Aligned_cols=50 Identities=22% Similarity=0.299 Sum_probs=29.5
Q ss_pred ceEEEEEEEEEcCCCCeEEEEE---ee----------CCCccEEEEecc--eEEEcCCCcEEEEEEE
Q 008679 467 GTVIVKRTVTNVGGSKSVYFFS---AK----------PPMGVSVKANPS--ILFFDHIGQKKSFTIT 518 (557)
Q Consensus 467 ~~~t~~~tvtn~~~~~~ty~~~---v~----------~~~g~~~~v~p~--~~~~~~~g~~~~~~vt 518 (557)
+..+++++|+|.|+.+...-.. .+ ..-|..+.+ |+ .+.| ++|+++++++.
T Consensus 18 gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdI-pAGTavRF-EPG~~r~V~LV 82 (101)
T 4ep8_B 18 GRATCRVVVENHGDRPIQVGSHYHFAEVNPALKFDRQQAAGYRLNI-PAGTAVRF-EPGQKREVELV 82 (101)
T ss_dssp TCCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCTTTTTTEEECS-STTCEEEE-CTTCEEEEEEE
T ss_pred CCCEEEEEEEeCCCcceEEccccChhHcCcceeecHhhccCceecc-cCCCeEee-CCCCeEEEEEE
Confidence 4577889999999976433211 01 112444443 32 3566 57888887764
No 80
>2dhy_A CUE domain-containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.20 E-value=74 Score=23.44 Aligned_cols=26 Identities=19% Similarity=0.220 Sum_probs=21.7
Q ss_pred HHHHHHhhCCCCCHHHHHHHHHcccc
Q 008679 356 AAALLKAIHPDWSSAAIRSALMTTAW 381 (557)
Q Consensus 356 ~aALl~q~~p~~s~~~ik~~L~~TA~ 381 (557)
...-|++.||+++.+.|+..|...-.
T Consensus 21 ~v~~L~~MFP~lD~~vI~~vL~a~~G 46 (67)
T 2dhy_A 21 AMDDFKTMFPNMDYDIIECVLRANSG 46 (67)
T ss_dssp HHHHHHHHCSSSCHHHHHHHHHHHTS
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHcCC
Confidence 45668999999999999999977654
Done!