Query 008682
Match_columns 557
No_of_seqs 376 out of 1666
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 09:16:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008682.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008682hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2x47_A Macro domain-containing 100.0 1.3E-48 4.5E-53 386.4 19.8 208 20-255 27-235 (235)
2 3q6z_A Poly [ADP-ribose] polym 100.0 8.2E-44 2.8E-48 347.2 19.4 183 71-253 25-214 (214)
3 1spv_A Putative polyprotein/ph 100.0 5.1E-43 1.7E-47 335.1 21.8 173 82-256 2-179 (184)
4 1yd9_A Core histone macro-H2A. 100.0 1.6E-42 5.5E-47 333.9 20.8 180 70-252 6-191 (193)
5 3q71_A Poly [ADP-ribose] polym 100.0 4.7E-42 1.6E-46 335.6 21.4 178 77-255 33-218 (221)
6 2xd7_A Core histone macro-H2A. 100.0 5.6E-42 1.9E-46 330.2 21.3 176 72-250 8-192 (193)
7 4abl_A Poly [ADP-ribose] polym 100.0 1.3E-41 4.3E-46 324.4 18.8 160 80-250 19-180 (183)
8 3kh6_A Poly [ADP-ribose] polym 100.0 1.6E-39 5.6E-44 313.1 19.9 160 80-250 30-191 (199)
9 2dx6_A Hypothetical protein TT 100.0 1.1E-38 3.7E-43 298.5 17.6 157 83-248 2-159 (159)
10 1vhu_A Hypothetical protein AF 100.0 1.4E-38 4.7E-43 310.4 15.7 166 81-253 19-202 (211)
11 3eti_A X (ADRP) domain, macro 100.0 8.9E-39 3E-43 300.4 12.8 149 83-249 10-167 (168)
12 2acf_A Replicase polyprotein 1 100.0 1.9E-38 6.6E-43 302.0 12.7 162 72-256 9-179 (182)
13 3gpg_A NSP3, non-structural pr 100.0 2.7E-38 9.3E-43 296.6 13.0 156 83-250 10-166 (168)
14 3gqe_A Non-structural protein 100.0 2.5E-37 8.4E-42 290.4 16.2 158 81-250 2-160 (168)
15 3ejg_A Non-structural protein 100.0 1.3E-36 4.4E-41 290.4 13.2 148 81-249 36-192 (193)
16 2vri_A Non-structural protein 100.0 2.3E-35 7.7E-40 279.4 11.4 157 68-249 6-171 (174)
17 3ejf_A Non-structural protein 100.0 1.9E-34 6.5E-39 272.1 13.7 155 77-248 8-175 (176)
18 1njr_A 32.1 kDa protein in ADH 100.0 1.2E-34 4.1E-39 292.7 7.9 173 82-263 44-254 (284)
19 3pg7_A Neurofibromin; SEC lipi 100.0 3.6E-33 1.2E-37 280.0 12.5 154 386-539 1-158 (256)
20 4gua_A Non-structural polyprot 100.0 1.7E-31 5.8E-36 282.7 15.9 155 83-249 344-499 (670)
21 3peg_A Neurofibromin; SEC14 do 100.0 1.1E-29 3.9E-34 258.3 9.6 158 374-531 5-169 (290)
22 2jyc_A Uncharacterized protein 99.9 2.2E-24 7.4E-29 201.4 15.2 130 81-219 18-150 (160)
23 2eee_A Uncharacterized protein 99.9 1.9E-24 6.5E-29 199.7 13.5 130 81-219 7-139 (149)
24 2fg1_A Conserved hypothetical 99.9 1.3E-22 4.5E-27 189.2 12.2 132 83-218 4-147 (158)
25 3hx3_A Retinaldehyde-binding p 99.7 3.6E-17 1.2E-21 168.8 11.5 136 391-526 137-285 (316)
26 1r5l_A Alpha-TTP, protein (alp 99.7 6.1E-17 2.1E-21 161.9 10.6 135 391-526 78-226 (262)
27 1aua_A Phosphatidylinositol tr 99.7 1.5E-16 5.1E-21 162.4 10.6 136 391-526 99-258 (296)
28 1olm_A SEC14-like protein 2; l 99.6 7.1E-16 2.4E-20 164.1 12.1 128 399-526 87-238 (403)
29 3q8g_A CRAL-TRIO domain-contai 99.6 6.8E-16 2.3E-20 159.6 9.8 135 392-526 115-273 (320)
30 3sig_A PArg, poly(ADP-ribose) 98.7 2.9E-08 9.9E-13 99.5 9.7 167 82-249 64-275 (277)
31 3jru_B Probable cytosol aminop 51.8 2.3E+02 0.008 30.2 14.5 109 83-195 3-113 (490)
32 2q3l_A Uncharacterized protein 47.6 1.1E+02 0.0037 26.0 9.4 89 422-515 32-120 (126)
33 3h8g_F Cytosol aminopeptidase; 41.1 2.2E+02 0.0074 30.5 12.2 107 84-195 2-111 (497)
34 1c76_A Staphylokinase, SAK; be 33.7 94 0.0032 26.9 6.4 55 399-453 28-85 (136)
35 2vg0_A Short-chain Z-isoprenyl 33.5 57 0.0019 31.2 5.8 51 172-223 31-81 (227)
36 3k0t_A Endoribonuclease L-PSP, 22.8 2E+02 0.0067 25.1 6.9 49 205-253 63-114 (143)
37 3l7q_A Putative translation in 22.6 2E+02 0.0069 24.2 6.9 50 205-254 45-97 (125)
38 3ugs_B Undecaprenyl pyrophosph 21.7 2.5E+02 0.0085 26.7 7.8 49 174-223 36-84 (225)
39 2sak_A Staphylokinase; plasmin 21.4 2.2E+02 0.0076 24.4 6.5 56 398-453 12-70 (121)
No 1
>2x47_A Macro domain-containing protein 1; signaling protein, signal transduction, estrogen signaling; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-48 Score=386.42 Aligned_cols=208 Identities=39% Similarity=0.671 Sum_probs=188.0
Q ss_pred CceeecCCCCCCchhhhccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCEEEEEEcCccceecCE
Q 008682 20 DSVVTLDQVPRWSDAEHRLSLDYESEDPSFSNSYFADPLASSSGAESSGNGMVSRFPVDHEINSKIYLWRGNPWNLEVDT 99 (557)
Q Consensus 20 ~~~v~~~~l~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~n~~I~i~~GDIt~~~vDa 99 (557)
+++|++++||+|++..... . .....+.|+++..+|.+|.|++|||+++++||
T Consensus 27 ~~~v~~~~ip~w~~~~~~~-------~---------------------~~~~~~~~~~~~~~~~~i~i~~GDIt~~~vDa 78 (235)
T 2x47_A 27 KDFVRLKKIPTWKEMAKGV-------A---------------------VKVEEPRYKKDKQLNEKISLLRSDITKLEVDA 78 (235)
T ss_dssp SCCEEGGGSCCHHHHHTTC-------C---------------------------CCCCCHHHHTTEEEEESCGGGEESSE
T ss_pred cCccchhhCCcHHHhcccc-------C---------------------ccccCCCCCcccccCCEEEEEeCccCcccCCE
Confidence 4699999999999855410 0 01124578899999999999999999999999
Q ss_pred EEEcCCcCCCCCCc-hHHHHHhhChhHHHHHHHhCCCCCCCEEEcccCCCCCCeEEEEcCCCCCCcchhhHHHHHHHHHH
Q 008682 100 VVNSTNENLDEAHS-SPGLHAAAGPGLAEECATLGGCRTGMAKVTNAYDLPARRVIHTVGPKYAVKYHTAAENALSHCYR 178 (557)
Q Consensus 100 IVNsaN~~l~~~~g-~~aI~~aaG~~l~~e~~~~~~~~~G~~~vT~~~~L~~k~IIH~VgP~~~~~~~~~~~~~L~~~y~ 178 (557)
|||+||+.|.+||| +++|+++||++|++||+++++|++|++++|+||+|+|+||||+|||.|+++......+.|++||+
T Consensus 79 IVNaAN~~l~~ggGV~~AI~~aaG~~l~~ec~~~g~~~~G~a~iT~~~~L~~k~VIH~vgP~~~~~~~~~~~~~L~~~y~ 158 (235)
T 2x47_A 79 IVNAANSSLLGGGGVDGCIHRAAGPLLTDECRTLQSCKTGKAKITGGYRLPAKYVIHTVGPIAYGEPSASQAAELRSCYL 158 (235)
T ss_dssp EEEECCTTCSCCSHHHHHHHHHHCHHHHHHHHTSCCCCBTCEEEEECTTSSSSEEEEEBCCCCTTCCCHHHHHHHHHHHH
T ss_pred EEEecCcccCCccHHHHHHHHHhCHHHHHHHHHhCCCCCCceEEecCCCCCCCEEEEecCccccCCCCcchHHHHHHHHH
Confidence 99999999998877 58999999999999999999999999999999999999999999999987555556789999999
Q ss_pred HHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHHHHHHcCCCccEEEEEecChhhHHHHHHHccccCCCC
Q 008682 179 SCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQKDKISAVVFCTTTASDTEIYKRLLPLYFPRD 255 (557)
Q Consensus 179 ~~L~~a~e~~~~SIAfP~I~tG~~g~p~~~~A~i~l~ai~~fl~~~~~~i~~V~~v~~~~~~~~~y~~~l~~yfpr~ 255 (557)
+||++|.+++++|||||+||||++|||++++|++|++++++|++++++++++|+||++++.++++|+++|+.||||.
T Consensus 159 ~~L~~A~e~~i~SIAfP~IstG~~g~p~~~aa~i~~~~v~~fl~~~~~~l~~V~fv~f~~~~~~~y~~~l~~~fp~~ 235 (235)
T 2x47_A 159 SSLDLLLEHRLRSVAFPCISTGVFGYPCEAAAEIVLATLREWLEQHKDKVDRLIICVFLEKDEDIYRSRLPHYFPVA 235 (235)
T ss_dssp HHHHHHHHTTCCEEEECCTTCSTTSCCHHHHHHHHHHHHHHHHHHHGGGCSEEEEEECSHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHhCCceEEeccccCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEECCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999887779999999999999999999999999984
No 2
>3q6z_A Poly [ADP-ribose] polymerase 14; structural genomics consortium, SGC, ADP-ribose binding, TRA; HET: APR; 2.23A {Homo sapiens}
Probab=100.00 E-value=8.2e-44 Score=347.23 Aligned_cols=183 Identities=22% Similarity=0.313 Sum_probs=169.9
Q ss_pred CCCCcccccCCCCEEEEEEcCccceecCEEEEcCCcCCCCCCc-hHHHHHhhChhHHHHHHHh----CCCCCCCEEEccc
Q 008682 71 MVSRFPVDHEINSKIYLWRGNPWNLEVDTVVNSTNENLDEAHS-SPGLHAAAGPGLAEECATL----GGCRTGMAKVTNA 145 (557)
Q Consensus 71 ~~~~f~~~~~~n~~I~i~~GDIt~~~vDaIVNsaN~~l~~~~g-~~aI~~aaG~~l~~e~~~~----~~~~~G~~~vT~~ 145 (557)
..+.|.+....+.+|.||+|||+++++|||||+||++|.++|| ++||+++||++|++||+++ ++|++|++++|+|
T Consensus 25 ~~~~~~~~~~~g~~I~v~~GDIt~~~vDaIVNaAN~~l~~ggGV~~AI~~aaG~~l~~ec~~~~~~~g~~~~G~a~iT~~ 104 (214)
T 3q6z_A 25 QKCFSRTVLAPGVVLIVQQGDLARLPVDVVVNASNEDLKHYGGLAAALSKAAGPELQADCDQIVKREGRLLPGNATISKA 104 (214)
T ss_dssp --CCEEEEEETTEEEEEEECCTTSCSSSEEEEEECTTCCCCSHHHHHHHHHHCTHHHHHHHHHHHHHCCCCTTCEEEEEC
T ss_pred CeeEEEEEcCCCcEEEEEecccccCcCCEEEeCCCCCCCCCchHHHHHHHhhhHHHHHHHHHHHHHcCCCCCCeEEEEcC
Confidence 3456788888999999999999999999999999999998876 5899999999999999876 8999999999999
Q ss_pred CCCCCCeEEEEcCCCCCCcchhhHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHHHHHHcC
Q 008682 146 YDLPARRVIHTVGPKYAVKYHTAAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQK 225 (557)
Q Consensus 146 ~~L~~k~IIH~VgP~~~~~~~~~~~~~L~~~y~~~L~~a~e~~~~SIAfP~I~tG~~g~p~~~~A~i~l~ai~~fl~~~~ 225 (557)
|+|+||||||+|||.|+.+...+..+.|++||++||++|.+++++|||||+||||++|||++++|++|+++|++|+++++
T Consensus 105 ~~L~~k~VIH~VgP~~~~~~~~~~~~~L~~~y~~~L~~A~~~~i~SIAfP~IstG~~g~P~~~aA~i~~~av~~fl~~~~ 184 (214)
T 3q6z_A 105 GKLPYHHVIHAVGPRWSGYEAPRCVYLLRRAVQLSLCLAEKYKYRSIAIPAISSGVFGFPLGRCVETIVSAIKENFQFKK 184 (214)
T ss_dssp TTSSSSEEEEEECCCCCGGGHHHHHHHHHHHHHHHHHHHHHTTCSEEEECCTTSSTTCCCHHHHHHHHHHHHHHHTSSCC
T ss_pred CCCCCCEEEEecCCcccCCCcchHHHHHHHHHHHHHHHHHHcCCcEEEECcccCCCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999876655678999999999999999999999999999999999999999999999999998874
Q ss_pred --CCccEEEEEecChhhHHHHHHHccccCC
Q 008682 226 --DKISAVVFCTTTASDTEIYKRLLPLYFP 253 (557)
Q Consensus 226 --~~i~~V~~v~~~~~~~~~y~~~l~~yfp 253 (557)
.++++|+||+++++++++|++.+..||.
T Consensus 185 ~~~~l~~V~fv~~d~~~~~~f~~~l~~~f~ 214 (214)
T 3q6z_A 185 DGHCLKEIYLVDVSEKTVEAFAEAVKTVFK 214 (214)
T ss_dssp --CCCCEEEEEESSHHHHHHHHHHHHHHC-
T ss_pred CCCCCCEEEEEeCCHHHHHHHHHHHHHhhC
Confidence 6899999999999999999999999883
No 3
>1spv_A Putative polyprotein/phosphatase; structural genomoics, alpha/beta monomeric protein, structural genomics, PSI, protein structure initiative; HET: MES; 2.00A {Escherichia coli} SCOP: c.50.1.2
Probab=100.00 E-value=5.1e-43 Score=335.14 Aligned_cols=173 Identities=33% Similarity=0.539 Sum_probs=158.5
Q ss_pred CCEEEEEEcCccceecCEEEEcCCcCCCCCCc-hHHHHHhhChhHHHHHHHh----CCCCCCCEEEcccCCCCCCeEEEE
Q 008682 82 NSKIYLWRGNPWNLEVDTVVNSTNENLDEAHS-SPGLHAAAGPGLAEECATL----GGCRTGMAKVTNAYDLPARRVIHT 156 (557)
Q Consensus 82 n~~I~i~~GDIt~~~vDaIVNsaN~~l~~~~g-~~aI~~aaG~~l~~e~~~~----~~~~~G~~~vT~~~~L~~k~IIH~ 156 (557)
|.+|.|++|||+++++|||||+||+.|.+||| +++|+++||++|++||+++ ++|++|++++|+||+||||||||+
T Consensus 2 ~~~i~i~~GDIt~~~~DaIVNaaN~~l~~ggGv~~aI~~aaG~~l~~e~~~~~~~~g~~~~G~a~iT~~~~L~~k~VIH~ 81 (184)
T 1spv_A 2 KTRIHVVQGDITKLAVDVIVNAANPSLMGGGGVDGAIHRAAGPALLDACLKVRQQQGDCPTGHAVITLAGDLPAKAVVHT 81 (184)
T ss_dssp -CCEEEEESCGGGCCCSEEEEECCTTCSCCSHHHHHHHHHHCHHHHHHHHHHHHHHCSCCTTCEEEECCTTSSSSEEEEE
T ss_pred CCeEEEEeCcCCcCCCCEEEECCCCCCCCCchHHHHHHHHhCHHHHHHHHHHHHhcCCCCCCCEEEeeCCCCCCCEEEEE
Confidence 57899999999999999999999999998876 5899999999999999987 899999999999999999999999
Q ss_pred cCCCCCCcchhhHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHHHHHHcCCCccEEEEEec
Q 008682 157 VGPKYAVKYHTAAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQKDKISAVVFCTT 236 (557)
Q Consensus 157 VgP~~~~~~~~~~~~~L~~~y~~~L~~a~e~~~~SIAfP~I~tG~~g~p~~~~A~i~l~ai~~fl~~~~~~i~~V~~v~~ 236 (557)
|||.|+.+... ..+.|++||++||++|.+++++|||||+||||++|||++++|++|++++++|+++++ .+++|+||++
T Consensus 82 vgP~~~~~~~~-~~~~L~~~y~~~L~~a~~~~~~SIAfP~IstG~~g~p~~~aa~i~~~~v~~~l~~~~-~~~~V~~v~~ 159 (184)
T 1spv_A 82 VGPVWRGGEQN-EDQLLQDAYLNSLRLVAANSYTSVAFPAISTGVYGYPRAAAAEIAVKTVSEFITRHA-LPEQVYFVCY 159 (184)
T ss_dssp CCCCCSSSSSS-HHHHHHHHHHHHHHHHHHTTCSEEEECCTTSSTTCCCHHHHHHHHHHHHHHHHHHCC-SSSEEEEEES
T ss_pred cCCcccCCCcc-hHHHHHHHHHHHHHHHHHhCCceEEeccccCCCCCCCHHHHHHHHHHHHHHHHHhCC-CCCEEEEEEC
Confidence 99999876533 468999999999999999999999999999999999999999999999999999875 5889999999
Q ss_pred ChhhHHHHHHHccccCCCCh
Q 008682 237 TASDTEIYKRLLPLYFPRDK 256 (557)
Q Consensus 237 ~~~~~~~y~~~l~~yfpr~~ 256 (557)
++.++++|+++|..|||+..
T Consensus 160 ~~~~~~~~~~~l~~~~~~~~ 179 (184)
T 1spv_A 160 DEENAHLYERLLTQQGDEEH 179 (184)
T ss_dssp SHHHHHHHHHHHHCC-----
T ss_pred CHHHHHHHHHHHHHhCCccc
Confidence 99999999999999999764
No 4
>1yd9_A Core histone macro-H2A.1; alpha-beta structure, A1PP domain, macro-domain, structural protein; 1.60A {Rattus norvegicus} SCOP: c.50.1.2 PDB: 1zr3_A* 2fxk_A 3iid_A* 3iif_A* 1zr5_A
Probab=100.00 E-value=1.6e-42 Score=333.86 Aligned_cols=180 Identities=22% Similarity=0.333 Sum_probs=164.9
Q ss_pred CCCCCcccccCCCCEEEEEEcCccceecCEEEEcCCcCCCCCCc-hHHHHHhhChhHHHHHHHh----CCCCCCCEEEcc
Q 008682 70 GMVSRFPVDHEINSKIYLWRGNPWNLEVDTVVNSTNENLDEAHS-SPGLHAAAGPGLAEECATL----GGCRTGMAKVTN 144 (557)
Q Consensus 70 ~~~~~f~~~~~~n~~I~i~~GDIt~~~vDaIVNsaN~~l~~~~g-~~aI~~aaG~~l~~e~~~~----~~~~~G~~~vT~ 144 (557)
+.+..+..+...|.+|.|++|||+++++|||||+||+.|.++|| +++|+++||++|++||+++ ++|++|++++|+
T Consensus 6 ~~~~~~~~~~~~~~~i~i~~GDIt~~~~DaIVNaaN~~l~~ggGv~~aI~~aaG~~l~~ec~~~~~~~g~~~~G~a~iT~ 85 (193)
T 1yd9_A 6 GFTVLSTKSLFLGQKLQVVQADIASIDSDAVVHPTNTDFYIGGEVGSTLEKKGGKEFVEAVLELRKKNGPLEVAGAAVSA 85 (193)
T ss_dssp CCCEEEEEECTTSCEEEEECSCGGGCCCSEEEEECCTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSCCTTCEEEEE
T ss_pred cceEecccCcCCCCEEEEEeCccCcCcCCEEEECCCccCCCCchHHHHHHHHhhHHHHHHHHHHHHHcCCCCCCCEEEec
Confidence 34455566777899999999999999999999999999998877 5999999999999999875 899999999999
Q ss_pred cCCCCCCeEEEEcCCCCCCcchhhHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHHHHHHc
Q 008682 145 AYDLPARRVIHTVGPKYAVKYHTAAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQ 224 (557)
Q Consensus 145 ~~~L~~k~IIH~VgP~~~~~~~~~~~~~L~~~y~~~L~~a~e~~~~SIAfP~I~tG~~g~p~~~~A~i~l~ai~~fl~~~ 224 (557)
||+|+||||||+|||.|+.. ...+.|++||++||++|.+++++|||||+||||++|||++++|++|++++++|++++
T Consensus 86 ~~~L~~k~VIH~vgP~~~~~---~~~~~L~~~y~~~L~~a~~~~~~SIAfP~IstG~~g~p~~~aa~i~~~~v~~~l~~~ 162 (193)
T 1yd9_A 86 GHGLPAKFVIHCNSPVWGSD---KCEELLEKTVKNCLALADDRKLKSIAFPSIGSGRNGFPKQTAAQLILKAISSYFVST 162 (193)
T ss_dssp CTTSSSSEEEEECCCCTTST---THHHHHHHHHHHHHHHHHHTTCSEEEECCCSBSTTCBCHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCCCEEEEeCCCCcCCc---chHHHHHHHHHHHHHHHHHhCCceEeecccccCCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999753 346799999999999999999999999999999999999999999999999999875
Q ss_pred C-CCccEEEEEecChhhHHHHHHHccccC
Q 008682 225 K-DKISAVVFCTTTASDTEIYKRLLPLYF 252 (557)
Q Consensus 225 ~-~~i~~V~~v~~~~~~~~~y~~~l~~yf 252 (557)
+ +++++|+||++++.++++|++.|..+.
T Consensus 163 ~~~~l~~V~fv~~~~~~~~~~~~~l~~~~ 191 (193)
T 1yd9_A 163 MSSSIKTVYFVLFDSESIGIYVQEMAKLD 191 (193)
T ss_dssp TTCCCCEEEEECCSHHHHHHHHHHHTTTT
T ss_pred CCCCcCEEEEEECCHHHHHHHHHHHHhhh
Confidence 4 679999999999999999999987544
No 5
>3q71_A Poly [ADP-ribose] polymerase 14; structural genomics, structural genomics consortium, SGC, transferase, PARP14 macro 2; HET: AR6; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.7e-42 Score=335.61 Aligned_cols=178 Identities=25% Similarity=0.332 Sum_probs=160.6
Q ss_pred cccCCCCEEEEEEcCccceecCEEEEcCCcCCC-CCCc-hHHHHHhhChhHHHHHHHhC---CCCCCCEEEcccCCCCCC
Q 008682 77 VDHEINSKIYLWRGNPWNLEVDTVVNSTNENLD-EAHS-SPGLHAAAGPGLAEECATLG---GCRTGMAKVTNAYDLPAR 151 (557)
Q Consensus 77 ~~~~~n~~I~i~~GDIt~~~vDaIVNsaN~~l~-~~~g-~~aI~~aaG~~l~~e~~~~~---~~~~G~~~vT~~~~L~~k 151 (557)
+....|.+|.||+|||+++++|||||+||+.|. ++|| ++||+++||++|++||++++ +|++|++++|+||+|+||
T Consensus 33 ~~t~~g~~I~i~~GDIt~~~vDAIVNaAN~~l~~~gGGV~~AI~~aaG~~L~~ec~~~~~~~~~~~G~a~iT~g~~Lp~k 112 (221)
T 3q71_A 33 LVSPGGLQMLLVKEGVQNAKTDVVVNSVPLDLVLSRGPLSKSLLEKAGPELQEELDTVGQGVAVSMGTVLKTSSWNLDCR 112 (221)
T ss_dssp EECTTCCEEEEEESCGGGCCSSEEEEECCTTCCTTSSHHHHHHHHHHCTHHHHHHHHHHHTSCCCTTCEEEEECTTSSSS
T ss_pred eeecCCcEEEEEeCcccCCcCCEEEECCCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhccCCCCCCeEEEEcCCCCCCC
Confidence 455678999999999999999999999999995 4454 69999999999999999874 899999999999999999
Q ss_pred eEEEEcCCCCCCcchhhHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHHHHHHcC-CCccE
Q 008682 152 RVIHTVGPKYAVKYHTAAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQK-DKISA 230 (557)
Q Consensus 152 ~IIH~VgP~~~~~~~~~~~~~L~~~y~~~L~~a~e~~~~SIAfP~I~tG~~g~p~~~~A~i~l~ai~~fl~~~~-~~i~~ 230 (557)
||||+|||.|+.+.. ...+.|++||++||++|.+++++|||||+||||++|||++++|++|+++|++|+++++ .++++
T Consensus 113 ~VIHtVgP~~~~~~~-~~~~~L~~~y~~~L~~A~e~~i~SIAfPaIsTG~~G~P~~~aA~i~~~~v~~fl~~~~~~~l~~ 191 (221)
T 3q71_A 113 YVLHVVAPEWRNGST-SSLKIMEDIIRECMEITESLSLKSIAFPAIGTGNLGFPKNIFAELIISEVFKFSSKNQLKTLQE 191 (221)
T ss_dssp EEEEECCCCCTTTCH-HHHHHHHHHHHHHHHHHHHTTCCEEEEECTTSSTTCCCHHHHHHHHHHHHHHHHHHCCCSSCCE
T ss_pred EEEEeCCCCCcCCCc-hHHHHHHHHHHHHHHHHHHhCCceEeeccccCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCE
Confidence 999999999988754 3468999999999999999999999999999999999999999999999999999985 68999
Q ss_pred EEEEecCh--hhHHHHHHHccccCCCC
Q 008682 231 VVFCTTTA--SDTEIYKRLLPLYFPRD 255 (557)
Q Consensus 231 V~~v~~~~--~~~~~y~~~l~~yfpr~ 255 (557)
|+||++++ .++++|++.|...||.+
T Consensus 192 V~fv~f~~d~~~~~~f~~~l~~r~~~~ 218 (221)
T 3q71_A 192 VHFLLHPSDHENIQAFSDEFARRANGN 218 (221)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHC--
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHccCC
Confidence 99999964 45699999998888743
No 6
>2xd7_A Core histone macro-H2A.2; chromosomal protein, nucleosome core, chromatin regulator, nucleus, DNA-binding protein, phosphoprotein; 2.09A {Homo sapiens}
Probab=100.00 E-value=5.6e-42 Score=330.23 Aligned_cols=176 Identities=20% Similarity=0.321 Sum_probs=162.3
Q ss_pred CCCcccccCCCCEEEEEEcCccce---ecCEEEEcCCcCCCCCCc-hHHHHHhhChhHHHHHHHh----CCCCCCCEEEc
Q 008682 72 VSRFPVDHEINSKIYLWRGNPWNL---EVDTVVNSTNENLDEAHS-SPGLHAAAGPGLAEECATL----GGCRTGMAKVT 143 (557)
Q Consensus 72 ~~~f~~~~~~n~~I~i~~GDIt~~---~vDaIVNsaN~~l~~~~g-~~aI~~aaG~~l~~e~~~~----~~~~~G~~~vT 143 (557)
...+..+...|.+|.|++|||+++ ++|||||+||+.|.++|| +++|+++||++|++||+++ ++|++|++++|
T Consensus 8 ~~~~~~~~~~~~~i~i~~GDIt~~~~~~~DaIVNaaN~~l~~ggGv~~aI~~aaG~~l~~ec~~~~~~~g~~~~G~a~iT 87 (193)
T 2xd7_A 8 TILSSKSLVLGQKLSLTQSDISHIGSMRVEGIVHPTTAEIDLKEDIGKALEKAGGKEFLETVKELRKSQGPLEVAEAAVS 87 (193)
T ss_dssp EEEEEEECTTSCEEEEEECCGGGGGGCCCSEEEEEECTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHTCSCCTTCEEEE
T ss_pred eEecccccCCCCEEEEEeCcccccCCCCCCEEEECCCccCCCccHHHHHHHHHhhHHHHHHHHHHHHHcCCCCCCCeEEe
Confidence 334556677889999999999999 999999999999998877 5899999999999999875 89999999999
Q ss_pred ccCCCCCCeEEEEcCCCCCCcchhhHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHHHHHH
Q 008682 144 NAYDLPARRVIHTVGPKYAVKYHTAAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEK 223 (557)
Q Consensus 144 ~~~~L~~k~IIH~VgP~~~~~~~~~~~~~L~~~y~~~L~~a~e~~~~SIAfP~I~tG~~g~p~~~~A~i~l~ai~~fl~~ 223 (557)
+||+|+||||||+|||.|..+ ...+.|++||++||++|.+++++|||||+||||++|||++++|++|++++++|+++
T Consensus 88 ~~~~L~~k~VIH~vgP~~~~~---~~~~~L~~~y~~~L~~a~~~~~~SIAfP~IstG~~g~p~~~aa~i~~~~v~~~l~~ 164 (193)
T 2xd7_A 88 QSSGLAAKFVIHCHIPQWGSD---KCEEQLEETIKNCLSAAEDKKLKSVAFPPFPSGRNCFPKQTAAQVTLKAISAHFDD 164 (193)
T ss_dssp ECTTSSSSEEEEEECCCTTST---THHHHHHHHHHHHHHHHHHTTCSEEEECCCCCSTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred eCCCCCCCEEEEECCCcCCCc---chHHHHHHHHHHHHHHHHHcCCCEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999754 35689999999999999999999999999999999999999999999999999998
Q ss_pred cC-CCccEEEEEecChhhHHHHHHHccc
Q 008682 224 QK-DKISAVVFCTTTASDTEIYKRLLPL 250 (557)
Q Consensus 224 ~~-~~i~~V~~v~~~~~~~~~y~~~l~~ 250 (557)
++ +++++|+||++++.++++|++.|..
T Consensus 165 ~~~~~l~~V~fv~~~~~~~~~~~~~l~~ 192 (193)
T 2xd7_A 165 SSASSLKNVYFLLFDSESIGIYVQEMAK 192 (193)
T ss_dssp CSSCCCCEEEEEECSHHHHHHHHHHHHC
T ss_pred cCCCCCCEEEEEECCHHHHHHHHHHHhh
Confidence 65 6799999999999999999998753
No 7
>4abl_A Poly [ADP-ribose] polymerase 14; transferase, PARP14; 1.15A {Homo sapiens} PDB: 4abk_A
Probab=100.00 E-value=1.3e-41 Score=324.37 Aligned_cols=160 Identities=18% Similarity=0.212 Sum_probs=152.5
Q ss_pred CCCCEEEEEEcCccceecCEEEEcCCcCCCCCCc-hHHHHHhhChhHHHHHHHhCCCCCCCEEEcccCCCCCCeEEEEcC
Q 008682 80 EINSKIYLWRGNPWNLEVDTVVNSTNENLDEAHS-SPGLHAAAGPGLAEECATLGGCRTGMAKVTNAYDLPARRVIHTVG 158 (557)
Q Consensus 80 ~~n~~I~i~~GDIt~~~vDaIVNsaN~~l~~~~g-~~aI~~aaG~~l~~e~~~~~~~~~G~~~vT~~~~L~~k~IIH~Vg 158 (557)
.++.+|+|++|||+++++|||||+||++|.+++| ++||+++||++|++||+++++|++|++++|+||+|+||||||+||
T Consensus 19 ig~~~i~i~~GDIt~~~~DaIVNaaN~~l~~ggGV~~aI~~aaG~~l~~ec~~~~~~~~G~a~iT~~~~L~~k~VIH~vg 98 (183)
T 4abl_A 19 IGSIIFQVASGDITKEEADVIVNSTSNSFNLKAGVSKAILECAGQNVERECSQQAQQRKNDYIITGGGFLRCKNIIHVIG 98 (183)
T ss_dssp ETTEEEEEEESCGGGCBCSEEEEEECTTSCCCSTHHHHHHHHHCHHHHHHHHHHHHHSCCSEEEEECTTSBSSEEEEEET
T ss_pred ECCEEEEEEeCcccCcccCEEEECCCCCCCCCccHHHHHHHHhhHHHHHHHHHhcCCCCCceEEecCCCCCCCEEEEeCc
Confidence 3678999999999999999999999999998876 589999999999999999999999999999999999999999999
Q ss_pred CCCCCcchhhHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHHHHHHcC-CCccEEEEEecC
Q 008682 159 PKYAVKYHTAAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQK-DKISAVVFCTTT 237 (557)
Q Consensus 159 P~~~~~~~~~~~~~L~~~y~~~L~~a~e~~~~SIAfP~I~tG~~g~p~~~~A~i~l~ai~~fl~~~~-~~i~~V~~v~~~ 237 (557)
|.| |++||++||++|.+++++|||||+||||++|||++++|++|++++++|+++++ ..+++|+||+++
T Consensus 99 P~~-----------L~~~y~~~L~~a~~~~~~SIAfP~IstG~~g~p~~~aa~i~~~~v~~fl~~~~~~~l~~V~fv~f~ 167 (183)
T 4abl_A 99 GND-----------VKSSVSSVLQECEKKNYSSICLPAIGTGNAKQHPDKVAEAIIDAIEDFVQKGSAQSVKKVKVVIFL 167 (183)
T ss_dssp TSC-----------HHHHHHHHHHHHHHTTCCEEEECCTTSSTTCCCHHHHHHHHHHHHHHHHHTTCCSSCCEEEEEESC
T ss_pred HHH-----------HHHHHHHHHHHHHHcCCCeEeeccccCCCCCcCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEECC
Confidence 975 99999999999999999999999999999999999999999999999999985 689999999999
Q ss_pred hhhHHHHHHHccc
Q 008682 238 ASDTEIYKRLLPL 250 (557)
Q Consensus 238 ~~~~~~y~~~l~~ 250 (557)
++++++|++.|..
T Consensus 168 ~~~~~~f~~~l~k 180 (183)
T 4abl_A 168 PQVLDVFYANMKK 180 (183)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988753
No 8
>3kh6_A Poly [ADP-ribose] polymerase 15; macro, PARP, BAL3, B-aggressive lymphoma protein 3, SGC, structural genomics consortium, alternative splicing; HET: APR; 2.20A {Homo sapiens} PDB: 3v2b_A*
Probab=100.00 E-value=1.6e-39 Score=313.10 Aligned_cols=160 Identities=19% Similarity=0.184 Sum_probs=152.3
Q ss_pred CCCCEEEEEEcCccceecCEEEEcCCcCCCCCCc-hHHHHHhhChhHHHHHHHhCCCCCCCEEEcccCCCCCCeEEEEcC
Q 008682 80 EINSKIYLWRGNPWNLEVDTVVNSTNENLDEAHS-SPGLHAAAGPGLAEECATLGGCRTGMAKVTNAYDLPARRVIHTVG 158 (557)
Q Consensus 80 ~~n~~I~i~~GDIt~~~vDaIVNsaN~~l~~~~g-~~aI~~aaG~~l~~e~~~~~~~~~G~~~vT~~~~L~~k~IIH~Vg 158 (557)
..+.+|++++|||+++++|||||+||+.|.+++| +++|+++||++|++||+++++|++|++++|+||+|+||||||+||
T Consensus 30 i~~~~i~i~~GDIt~~~vDaIVNaaN~~l~~ggGV~~AI~~aaG~~l~~ec~~~~~~~~G~a~iT~g~~L~~k~VIH~vg 109 (199)
T 3kh6_A 30 IGAITFQVATGDIATEQVDVIVNSTARTFNRKSGVSRAILEGAGQAVESECAVLAAQPHRDFIITPGGCLKCKIIIHVPG 109 (199)
T ss_dssp ETTEEEEEEESCGGGCCSSEEEEEECTTSCCCSTHHHHHHHHHCHHHHHHHHHHHTSCCCSSEEEECTTSSSSEEEEEET
T ss_pred ECCEEEEEEecccccCcCCEEEECCCCCCCCCchHHHHHHHHhhHHHHHHHHHhCCCCCCeEEEecCCCCCCCEEEEeCC
Confidence 3678999999999999999999999999998877 589999999999999999999999999999999999999999999
Q ss_pred CCCCCcchhhHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHHHHHHcC-CCccEEEEEecC
Q 008682 159 PKYAVKYHTAAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQK-DKISAVVFCTTT 237 (557)
Q Consensus 159 P~~~~~~~~~~~~~L~~~y~~~L~~a~e~~~~SIAfP~I~tG~~g~p~~~~A~i~l~ai~~fl~~~~-~~i~~V~~v~~~ 237 (557)
|. .|++||++||++|.+++++|||||+||||++|||++++|++|++++++|+++++ ..+++|+||+++
T Consensus 110 p~-----------~L~~~y~~~L~~a~~~~i~SIAfP~IgtG~~G~p~~~aa~i~~~~v~~fl~~~~~~~l~~V~fv~f~ 178 (199)
T 3kh6_A 110 GK-----------DVRKTVTSVLEECEQRKYTSVSLPAIGTGNAGKNPITVADNIIDAIVDFSSQHSTPSLKTVKVVIFQ 178 (199)
T ss_dssp TS-----------CHHHHHHHHHHHHHHTTCCEEEECCTTSSTTCCCHHHHHHHHHHHHHHHHHHCSSCSCCEEEEEESS
T ss_pred CH-----------HHHHHHHHHHHHHHHcCCCEEeecccccCCCCcCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEECC
Confidence 84 399999999999999999999999999999999999999999999999999875 679999999999
Q ss_pred hhhHHHHHHHccc
Q 008682 238 ASDTEIYKRLLPL 250 (557)
Q Consensus 238 ~~~~~~y~~~l~~ 250 (557)
++++++|++.|..
T Consensus 179 ~~~~~~f~~~l~~ 191 (199)
T 3kh6_A 179 PELLNIFYDSMKK 191 (199)
T ss_dssp THHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999875
No 9
>2dx6_A Hypothetical protein TTHA0132; conserved hypothetical protein, structural genomics, NPPSFA; 1.78A {Thermus thermophilus} PDB: 3v45_A
Probab=100.00 E-value=1.1e-38 Score=298.53 Aligned_cols=157 Identities=27% Similarity=0.394 Sum_probs=148.1
Q ss_pred CEEEEEEcCccceecCEEEEcCCcCCCCCCc-hHHHHHhhChhHHHHHHHhCCCCCCCEEEcccCCCCCCeEEEEcCCCC
Q 008682 83 SKIYLWRGNPWNLEVDTVVNSTNENLDEAHS-SPGLHAAAGPGLAEECATLGGCRTGMAKVTNAYDLPARRVIHTVGPKY 161 (557)
Q Consensus 83 ~~I~i~~GDIt~~~vDaIVNsaN~~l~~~~g-~~aI~~aaG~~l~~e~~~~~~~~~G~~~vT~~~~L~~k~IIH~VgP~~ 161 (557)
.+|++++|||+++++|||||++|+.+.+|+| +++|++++|++|++||++++++++|++++|++++|+|+||||+|||.|
T Consensus 2 ~~i~i~~GDI~~~~~daIVnaaN~~l~~ggGv~~aI~~~~G~~l~~~c~~~g~~~~G~a~it~~~~L~~~~Vih~vgp~~ 81 (159)
T 2dx6_A 2 ARIRVVQGDITEFQGDAIVNAANNYLKLGAGVAGAILRKGGPSIQEECDRIGKIRVGEAAVTGAGNLPVRYVIHAAVLGD 81 (159)
T ss_dssp CEEEEEESCGGGCCSSEEEEEEETTCCCCSTTHHHHHHHHCTHHHHHHHHHCCCCTTCEEEEECTTSSSSEEEEEEEESS
T ss_pred eEEEEEECcCCcCCCCEEEECCCCCCCCCchHHHHHHHHhCHHHHHHHHhcCCCCCCcEEEecCCCCCCCEEEEEeCCCC
Confidence 3799999999999999999999999998876 699999999999999999999999999999999999999999999999
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHHHHHHcCCCccEEEEEecChhhH
Q 008682 162 AVKYHTAAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQKDKISAVVFCTTTASDT 241 (557)
Q Consensus 162 ~~~~~~~~~~~L~~~y~~~L~~a~e~~~~SIAfP~I~tG~~g~p~~~~A~i~l~ai~~fl~~~~~~i~~V~~v~~~~~~~ 241 (557)
+ +. ..+.|++||++||++|.+++++|||||+||||++|||++++|++|++++++| +++++|+||++++.++
T Consensus 82 ~-~~---~~~~L~~~~~~~L~~a~~~~~~sIa~P~igtG~~g~p~~~~a~i~~~~~~~~-----~~~~~V~~v~~~~~~~ 152 (159)
T 2dx6_A 82 E-PA---SLETVRKATKSALEKAVELGLKTVAFPLLGTGVGGLPVEAVARVMLEEIKKA-----PDTLEVTLYGYREEDA 152 (159)
T ss_dssp S-CC---CHHHHHHHHHHHHHHHHHTTCSEEEECCTTSSTTCCCHHHHHHHHHHHHTTS-----CTTCEEEEEESSHHHH
T ss_pred C-Cc---hHHHHHHHHHHHHHHHHHcCCcEEEECCccCCCCCCCHHHHHHHHHHHHHhc-----CCCCEEEEEECCHHHH
Confidence 7 21 3679999999999999999999999999999999999999999999999999 4688999999999999
Q ss_pred HHHHHHc
Q 008682 242 EIYKRLL 248 (557)
Q Consensus 242 ~~y~~~l 248 (557)
++|++.|
T Consensus 153 ~~~~~~l 159 (159)
T 2dx6_A 153 EAIRRAL 159 (159)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 9999865
No 10
>1vhu_A Hypothetical protein AF1521; structural genomics, unknown function; HET: MSE MES; 1.34A {Archaeoglobus fulgidus} SCOP: c.50.1.2 PDB: 2bfq_A* 1hjz_A* 2bfr_A*
Probab=100.00 E-value=1.4e-38 Score=310.38 Aligned_cols=166 Identities=19% Similarity=0.245 Sum_probs=154.1
Q ss_pred CCCEEEEEEcCccceecCEEEEcCCcCCCCCCc-hHHHHHhhC----hhHHHHHHH----hCC--CCCCCEEEcccCCCC
Q 008682 81 INSKIYLWRGNPWNLEVDTVVNSTNENLDEAHS-SPGLHAAAG----PGLAEECAT----LGG--CRTGMAKVTNAYDLP 149 (557)
Q Consensus 81 ~n~~I~i~~GDIt~~~vDaIVNsaN~~l~~~~g-~~aI~~aaG----~~l~~e~~~----~~~--~~~G~~~vT~~~~L~ 149 (557)
.+.+|.|++|||+++++|||||+||+.|.+|+| +++|+++|| ++|++||++ +++ |++|++++|++|+|+
T Consensus 19 ~~~~i~i~~GDIt~~~vDaIVNaaN~~l~~ggGV~~aI~~aaG~~~~~~l~~ec~~~~~~~g~~~~~~G~a~iT~~~~L~ 98 (211)
T 1vhu_A 19 GDITLKLAQGDITQYPAKAIVNAANKRLEHGGGVAYAIAKACAGDAGLYTEISKKAMREQFGRDYIDHGEVVVTPAMNLE 98 (211)
T ss_dssp TTEEEEEEESCGGGSCCSEEEEEECTTCCCCSHHHHHHHHHHHSSHHHHHHHHHHHHHHHHSSSCCCTTCCEEEECGGGG
T ss_pred CCEEEEEEecccCcCCCCEEEECCCccccCccHHHHHHHHHhCCCchHHHHHHHHHHHHHcCCCcccCCcEEEEECCCCC
Confidence 456999999999999999999999999998876 589999999 999999988 677 999999999999999
Q ss_pred C---CeEEEEcCC----CCCCcchhhHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHHHHH
Q 008682 150 A---RRVIHTVGP----KYAVKYHTAAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLE 222 (557)
Q Consensus 150 ~---k~IIH~VgP----~~~~~~~~~~~~~L~~~y~~~L~~a~e~~~~SIAfP~I~tG~~g~p~~~~A~i~l~ai~~fl~ 222 (557)
| |||||+||| .|.+ ...+.|++||++||++|.+++++|||||+||||++|||++++|++|++++++|+
T Consensus 99 ~~g~k~VIH~vgP~~~~~~~~----~~~~~L~~~y~~~L~~A~~~~i~SIAfP~IstG~~G~p~~~aa~i~~~~v~~~l- 173 (211)
T 1vhu_A 99 ERGIKYVFHTVGPICSGMWSE----ELKEKLYKAFLGPLEKAEEMGVESIAFPAVSAGIYGCDLEKVVETFLEAVKNFK- 173 (211)
T ss_dssp GGTCCEEEEEECCCCTTCCCH----HHHHHHHHHHHHHHHHHHHHTCCEEEECCTTSSTTCCCHHHHHHHHHHHHHHCC-
T ss_pred ccCcCEEEEecCCccccccCc----chHHHHHHHHHHHHHHHHHcCCCEEEeccccCCCCCCCHHHHHHHHHHHHHHHH-
Confidence 9 999999999 8843 456899999999999999999999999999999999999999999999999999
Q ss_pred HcCCCccEEEEEecChhhHHHHHHHccccCC
Q 008682 223 KQKDKISAVVFCTTTASDTEIYKRLLPLYFP 253 (557)
Q Consensus 223 ~~~~~i~~V~~v~~~~~~~~~y~~~l~~yfp 253 (557)
++ + +++|+||++++.++++|++.|+.|+.
T Consensus 174 ~~-~-l~~V~~v~~~~~~~~~~~~~l~~~~~ 202 (211)
T 1vhu_A 174 GS-A-VKEVALVIYDRKSAEVALKVFERSLE 202 (211)
T ss_dssp CS-S-CCEEEEEESSHHHHHHHHHHHHHHC-
T ss_pred hC-C-CCEEEEEECCHHHHHHHHHHHHHhhc
Confidence 43 3 89999999999999999999987664
No 11
>3eti_A X (ADRP) domain, macro domain of non-structural protein 3; coronavirus, X domain, RNA binding protein; 2.20A {Feline infectious peritonitis virus} PDB: 3ew5_A* 3jzt_A*
Probab=100.00 E-value=8.9e-39 Score=300.35 Aligned_cols=149 Identities=18% Similarity=0.227 Sum_probs=138.5
Q ss_pred CEEEEEEcCccc----eecCEEEEcCCcCCCCCCc-hHHHHHhhChhHHHHHHHh----CCCCCCCEEEcccCCCCCCeE
Q 008682 83 SKIYLWRGNPWN----LEVDTVVNSTNENLDEAHS-SPGLHAAAGPGLAEECATL----GGCRTGMAKVTNAYDLPARRV 153 (557)
Q Consensus 83 ~~I~i~~GDIt~----~~vDaIVNsaN~~l~~~~g-~~aI~~aaG~~l~~e~~~~----~~~~~G~~~vT~~~~L~~k~I 153 (557)
.+|.+|+||||+ +++|||||+||++|.++|| ++||+++||++|++||+++ ++|++|++++|+|| |+|+||
T Consensus 10 ~~i~l~~GDIt~~~~~~~vDaIVNaAN~~l~~ggGV~~AI~~aaG~~l~~ec~~~~~~~g~~~~G~a~iT~g~-l~~~~V 88 (168)
T 3eti_A 10 GKVSFYQGDLDVLINFLEPDVLVNAANGDLRHVGGVARAIDVFTGGKLTKRSKEYLKSSKAIAPGNAVLFENV-LEHLSV 88 (168)
T ss_dssp TTEEEEESCHHHHHHHHCCSEEEEEECTTCCCCSTTHHHHHHHTTTHHHHHHHHHHTTSCCCCTTEEEEEEEE-ETTEEE
T ss_pred CeEEEEeCcccccCCCCCCCEEEeCCCcccCCCchHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEecCC-CCccEE
Confidence 789999999999 8999999999999998876 6999999999999999986 89999999999999 999999
Q ss_pred EEEcCCCCCCcchhhHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHHHHHHcCCCccEEEE
Q 008682 154 IHTVGPKYAVKYHTAAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQKDKISAVVF 233 (557)
Q Consensus 154 IH~VgP~~~~~~~~~~~~~L~~~y~~~L~~a~e~~~~SIAfP~I~tG~~g~p~~~~A~i~l~ai~~fl~~~~~~i~~V~~ 233 (557)
||||||.|... ..++.|++||++||++ .+|||||+||||++|||++++|++|++++++ ++|+|
T Consensus 89 IHtVgP~~~~~---~~~~~L~~~y~~~L~~-----~~SIAfP~IstG~~g~P~~~aa~i~~~~v~~---------~~V~~ 151 (168)
T 3eti_A 89 MNAVGPRNGDS---RVEGKLCNVYKAIAKC-----DGKILTPLISVGIFKVKLEVSLQCLLKTVTD---------RDLNV 151 (168)
T ss_dssp EEEECCCTTST---THHHHHHHHHHHHHTS-----CSCEEECCTTBSTTCBCHHHHHHHHHHHCCS---------SCEEE
T ss_pred EEecCCCCCcc---hHHHHHHHHHHHHHHh-----cCceeecccccCCCCCCHHHHHHHHHHHHhc---------CeEEE
Confidence 99999999653 3468999999999985 4799999999999999999999999999987 57999
Q ss_pred EecChhhHHHHHHHcc
Q 008682 234 CTTTASDTEIYKRLLP 249 (557)
Q Consensus 234 v~~~~~~~~~y~~~l~ 249 (557)
|+|+++++++|+++|.
T Consensus 152 v~f~~~~~~~~~~~l~ 167 (168)
T 3eti_A 152 FVYTDQERVTIENFFN 167 (168)
T ss_dssp EECCHHHHHHHHHHHH
T ss_pred EEcCHHHHHHHHHHhc
Confidence 9999999999999874
No 12
>2acf_A Replicase polyprotein 1AB; ADRP domain, SARS NSP-3, APPR-1-P phosphatase, structural GE joint center for structural genomics, JCSG; 1.40A {Sars coronavirus TOR2} SCOP: c.50.1.2 PDB: 2fav_A*
Probab=100.00 E-value=1.9e-38 Score=301.96 Aligned_cols=162 Identities=17% Similarity=0.224 Sum_probs=144.8
Q ss_pred CCCcccccCCCCEEEEEEcCccce----ecCEEEEcCCcCCCCCCc-hHHHHHhhChhHHHHHHH----hCCCCCCCEEE
Q 008682 72 VSRFPVDHEINSKIYLWRGNPWNL----EVDTVVNSTNENLDEAHS-SPGLHAAAGPGLAEECAT----LGGCRTGMAKV 142 (557)
Q Consensus 72 ~~~f~~~~~~n~~I~i~~GDIt~~----~vDaIVNsaN~~l~~~~g-~~aI~~aaG~~l~~e~~~----~~~~~~G~~~v 142 (557)
+..|+....+|.+|.||+||||++ ++|||||+||+.|.+||| +++|+++||++|++||++ .++|++|++++
T Consensus 9 ~~~~~~~~~~~~~i~i~~GDIt~~~~~~~vDAIVNaAN~~l~~ggGV~~AI~~aaG~~l~~ec~~~~~~~g~~~~G~a~i 88 (182)
T 2acf_A 9 VNQFTGYLKLTDNVAIKCVDIVKEAQSANPMVIVNAANIHLKHGGGVAGALNKATNGAMQKESDDYIKLNGPLTVGGSCL 88 (182)
T ss_dssp SCCCCSCEECSSSEEEEESCHHHHHHHHCCSEEEEECCTTCCCCSHHHHHHHHHTTTHHHHHHHHHHHHHCCCCTTCEEE
T ss_pred ccccccccccCCeEEEEeCcccccccCCCCCEEEECCCCCCCCCchHHHHHHHHhCHHHHHHHHHHHHHcCCCCCCcEEE
Confidence 456889999999999999999999 999999999999999887 589999999999999986 48999999999
Q ss_pred cccCCCCCCeEEEEcCCCCCCcchhhHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHHHHH
Q 008682 143 TNAYDLPARRVIHTVGPKYAVKYHTAAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLE 222 (557)
Q Consensus 143 T~~~~L~~k~IIH~VgP~~~~~~~~~~~~~L~~~y~~~L~~a~e~~~~SIAfP~I~tG~~g~p~~~~A~i~l~ai~~fl~ 222 (557)
|+||+|+ ++|||+|||.|+.+. ..+.|++||+++ ++++|||||+||||++|||++++|++|++++++
T Consensus 89 T~~~~L~-~~VIH~vgP~~~~~~---~~~~L~~~y~~~------~~~~SIAfP~IstGi~G~p~~~aa~i~~~~v~~--- 155 (182)
T 2acf_A 89 LSGHNLA-KKCLHVVGPNLNAGE---DIQLLKAAYENF------NSQDILLAPLLSAGIFGAKPLQSLQVCVQTVRT--- 155 (182)
T ss_dssp EECTTTC-SEEEEECCCCGGGTC---CTTHHHHHHHGG------GGSSEEEECCTTCGGGCCCHHHHHHHHHHHCCS---
T ss_pred eeCCCCC-ceEEEECCCCCCCCc---hHHHHHHHHHHh------cCCCEEEECCcccCCCCCCHHHHHHHHHHHHhC---
Confidence 9999995 799999999997643 356899999996 799999999999999999999999999999975
Q ss_pred HcCCCccEEEEEecChhhHHHHHHHccccCCCCh
Q 008682 223 KQKDKISAVVFCTTTASDTEIYKRLLPLYFPRDK 256 (557)
Q Consensus 223 ~~~~~i~~V~~v~~~~~~~~~y~~~l~~yfpr~~ 256 (557)
+|+||+++++ +|+++|+.||||..
T Consensus 156 -------~V~~v~~d~~---~y~~~l~~~~p~~~ 179 (182)
T 2acf_A 156 -------QVYIAVNDKA---LYEQVVMDYLDNLK 179 (182)
T ss_dssp -------EEEEEESCHH---HHHHHHHHHC----
T ss_pred -------cEEEEECCHH---HHHHHHHHhCCCCC
Confidence 7999999654 89999999999874
No 13
>3gpg_A NSP3, non-structural protein 3; macro domain, X domain, alphavirus, VIZI enzymes involved in replication, ATP-binding, cell membrane endosome; 1.65A {Chikungunya virus} PDB: 3gpo_A* 3gpq_A
Probab=100.00 E-value=2.7e-38 Score=296.65 Aligned_cols=156 Identities=15% Similarity=0.159 Sum_probs=141.6
Q ss_pred CEEEEEEcCccceecCEEEEcCCcCCCCCCc-hHHHHHhhChhHHHHHHHhCCCCCCCEEEcccCCCCCCeEEEEcCCCC
Q 008682 83 SKIYLWRGNPWNLEVDTVVNSTNENLDEAHS-SPGLHAAAGPGLAEECATLGGCRTGMAKVTNAYDLPARRVIHTVGPKY 161 (557)
Q Consensus 83 ~~I~i~~GDIt~~~vDaIVNsaN~~l~~~~g-~~aI~~aaG~~l~~e~~~~~~~~~G~~~vT~~~~L~~k~IIH~VgP~~ 161 (557)
....||+||||++++|||||+||+.|.+||| +++|+++||++++ .++|++|++++|+|+ ||||||+|||.|
T Consensus 10 ~~~~~~~GDIt~~~vDAIVNaAN~~l~~ggGV~~aI~~aaG~~l~-----~~~~~~G~a~iT~~~---~k~VIHtVGP~~ 81 (168)
T 3gpg_A 10 PSYRVKRMDIAKNDEECVVNAANPRGLPGDGVCKAVYKKWPESFK-----NSATPVGTAKTVMCG---TYPVIHAVGPNF 81 (168)
T ss_dssp CCC-CEESCGGGCCSSCEEEECCTTCCCCSHHHHHHHHHCGGGGT-----TCCCCTTCEEEEEET---TEEEEEECCCCT
T ss_pred CceEEEeCcCCcccCCEEEeCCCcccCCCchHHHHHHHHhhHHhh-----cCCCCCCCEEEecCC---CCEEEEeCCCCc
Confidence 3457899999999999999999999998887 5899999999873 689999999999995 999999999999
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHHHHHHcCCCccEEEEEecChhhH
Q 008682 162 AVKYHTAAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQKDKISAVVFCTTTASDT 241 (557)
Q Consensus 162 ~~~~~~~~~~~L~~~y~~~L~~a~e~~~~SIAfP~I~tG~~g~p~~~~A~i~l~ai~~fl~~~~~~i~~V~~v~~~~~~~ 241 (557)
+.+...++.+.|++||++||++|.+++++|||||+||||++|||++++|+ +++++++|++. .+++|+||+++++++
T Consensus 82 ~~~~~~~~~~~L~~~y~~~L~~A~~~~~~SIAfP~IstGi~g~P~~~aa~-ai~~v~~~~~~---~~~~V~fv~f~~~~~ 157 (168)
T 3gpg_A 82 SNYSESEGDRELAAAYREVAKEVTRLGVNSVAIPLLSTGVYSGGKDRLTQ-SLNHLFTAMDS---TDADVVIYCRDKEWE 157 (168)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHHHTCSEEEEECTTSSTTSTTSCCHHH-HC-CHHHHHTT---CCSEEEEEESCHHHH
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHhCCcEEEECccccCCCCCCHHHHHH-HHHHHHHhccC---CCCEEEEEECCHHHH
Confidence 98877666789999999999999999999999999999999999999999 88998888754 488999999999999
Q ss_pred HHHHHHccc
Q 008682 242 EIYKRLLPL 250 (557)
Q Consensus 242 ~~y~~~l~~ 250 (557)
++|++.|..
T Consensus 158 ~~y~~~l~~ 166 (168)
T 3gpg_A 158 KKISEAIQM 166 (168)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhc
Confidence 999998863
No 14
>3gqe_A Non-structural protein 3; macro domain, X domain, venezuelan equine encephalitis virus alphavirus; HET: BCN; 2.30A {Venezuelan equine encephalitis virus} PDB: 3gqo_A*
Probab=100.00 E-value=2.5e-37 Score=290.37 Aligned_cols=158 Identities=16% Similarity=0.216 Sum_probs=143.8
Q ss_pred CCCEEEEEEcCccceecCEEEEcCCcCCCCCCc-hHHHHHhhChhHHHHHHHhCCCCCCCEEEcccCCCCCCeEEEEcCC
Q 008682 81 INSKIYLWRGNPWNLEVDTVVNSTNENLDEAHS-SPGLHAAAGPGLAEECATLGGCRTGMAKVTNAYDLPARRVIHTVGP 159 (557)
Q Consensus 81 ~n~~I~i~~GDIt~~~vDaIVNsaN~~l~~~~g-~~aI~~aaG~~l~~e~~~~~~~~~G~~~vT~~~~L~~k~IIH~VgP 159 (557)
.+.+|.+|+||||++++|||||+||+.|.+||| +++|++++|++++ .++|++|++++|++ +||||||+|||
T Consensus 2 ~~~~i~v~~GDIt~~~vDAIVNaAN~~l~~ggGV~~aI~~aaG~~l~-----~~~~~~G~a~iT~~---~~k~VIH~VgP 73 (168)
T 3gqe_A 2 KAPSYHVVRGDIATATEGVIINAANSKGQPGGGVCGALYKKFPESFD-----LQPIEVGKARLVKG---AAKHIIHAVGP 73 (168)
T ss_dssp CCCEEEEEESCGGGCCSSEEEEEECTTSCCTTGGGSHHHHHCGGGCC-----CCCCCTTCEEEECC---TTCCEEEEECC
T ss_pred CCCeEEEEeCcccCcccCEEEeCCCcccCCCccHHHHHHHHhhHHhc-----CCCcCCCcEEEEcC---CCCEEEEcCCC
Confidence 367999999999999999999999999998877 5899999999874 68999999999998 49999999999
Q ss_pred CCCCcchhhHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHHHHHHcCCCccEEEEEecChh
Q 008682 160 KYAVKYHTAAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQKDKISAVVFCTTTAS 239 (557)
Q Consensus 160 ~~~~~~~~~~~~~L~~~y~~~L~~a~e~~~~SIAfP~I~tG~~g~p~~~~A~i~l~ai~~fl~~~~~~i~~V~~v~~~~~ 239 (557)
.|+.+...++.+.|++||++||++|.+++++|||||+||||++|||++++|+ ++++|++..++++.+|+||+++++
T Consensus 74 ~~~~~~~~~~~~~L~~~y~~~L~~a~~~~~~SIAfP~IstG~~g~p~~~aa~----~i~~~l~~~~~~~~~V~iv~fd~~ 149 (168)
T 3gqe_A 74 NFNKVSEVEGDKQLAEAYESIAKIVNDNNYKSVAIPLLSTGIFSGNKDRLTQ----SLNHLLTALDTTDADVAIYCRDKK 149 (168)
T ss_dssp CTTTSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECTTSSTTSCSSCCHHH----HHHHHHHHHTTSCCEEEEEESCHH
T ss_pred ccCCCCchhHHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCHHHHHH----HHHHHHHHCCCCCCeEEEEEcCHH
Confidence 9998876666789999999999999999999999999999999999999998 446677777777889999999999
Q ss_pred hHHHHHHHccc
Q 008682 240 DTEIYKRLLPL 250 (557)
Q Consensus 240 ~~~~y~~~l~~ 250 (557)
+++.|++.+.+
T Consensus 150 ~~~~~~~~~~~ 160 (168)
T 3gqe_A 150 WEMTLKEAVAR 160 (168)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999988764
No 15
>3ejg_A Non-structural protein 3; HCOV 229E, X-domain, macro domain, NSP3, ADRP, hydrolase, ribosomal frameshifting, RNA-binding; 1.78A {Human coronavirus 229E} PDB: 3ewr_A* 3ewq_A*
Probab=100.00 E-value=1.3e-36 Score=290.36 Aligned_cols=148 Identities=16% Similarity=0.229 Sum_probs=136.8
Q ss_pred CCCEEEEEEcCccc----eecCEEEEcCCcCCCCCCc-hHHHHHhhChhHHHHHHHh----CCCCCCCEEEcccCCCCCC
Q 008682 81 INSKIYLWRGNPWN----LEVDTVVNSTNENLDEAHS-SPGLHAAAGPGLAEECATL----GGCRTGMAKVTNAYDLPAR 151 (557)
Q Consensus 81 ~n~~I~i~~GDIt~----~~vDaIVNsaN~~l~~~~g-~~aI~~aaG~~l~~e~~~~----~~~~~G~~~vT~~~~L~~k 151 (557)
.+.+|.+|+||||+ +++|||||+||+.|.++|| ++||+++||++|++||+++ ++|++|++++|+||+|
T Consensus 36 ~~~~i~l~~GDIt~~~~~~~vDAIVNaAN~~L~~ggGV~~AI~~aaG~~l~~ec~~l~~~~g~~~~G~a~iT~~~~L--- 112 (193)
T 3ejg_A 36 VHDNVAFYQGDVDTVVNGVDFDFIVNAANENLAHGGGLAKALDVYTKGKLQRLSKEHIGLAGKVKVGTGVMVECDSL--- 112 (193)
T ss_dssp EETTEEEEECCHHHHHHHCCCSEEEEEECTTCCCCSHHHHHHHHHTTTHHHHHHHHHHHHHCSCCTTCEEEEEETTE---
T ss_pred CCCeEEEEeCcccccCcCCCcCEEEeCCCcccCCCchHHHHHHHHhhHHHHHHHHHHHHHcCCCCCCCEEEecCCCe---
Confidence 56899999999999 8999999999999998887 5899999999999999875 8999999999999999
Q ss_pred eEEEEcCCCCCCcchhhHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHHHHHHcCCCccEE
Q 008682 152 RVIHTVGPKYAVKYHTAAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQKDKISAV 231 (557)
Q Consensus 152 ~IIH~VgP~~~~~~~~~~~~~L~~~y~~~L~~a~e~~~~SIAfP~I~tG~~g~p~~~~A~i~l~ai~~fl~~~~~~i~~V 231 (557)
+|||||||.|+. ..++.|++||++||+. .+|||||+||||++|||++++|++|++++++ .+|
T Consensus 113 ~VIHtVGP~~~~----~~~~~L~~~y~~~L~~-----~~SIAfPaIstGi~G~P~~~aa~ial~~v~~---------~~V 174 (193)
T 3ejg_A 113 RIFNVVGPRKGK----HERDLLIKAYNTINNE-----QGTPLTPILSCGIFGIKLETSLEVLLDVCNT---------KEV 174 (193)
T ss_dssp EEEEEECCCSST----THHHHHHHHHHHHHHS-----SSCEEECCTTCGGGCCCHHHHHHHHHHHCCS---------SCE
T ss_pred eEEEecCCCCCc----hHHHHHHHHHHHHHHh-----cCceeecccccCCCCCCHHHHHHHHHHHHhc---------CeE
Confidence 999999999964 3567999999999973 3799999999999999999999999999987 379
Q ss_pred EEEecChhhHHHHHHHcc
Q 008682 232 VFCTTTASDTEIYKRLLP 249 (557)
Q Consensus 232 ~~v~~~~~~~~~y~~~l~ 249 (557)
+||+|+++++++|+++|.
T Consensus 175 ~fv~f~~~~~~~~~~~l~ 192 (193)
T 3ejg_A 175 KVFVYTDTEVCKVKDFVS 192 (193)
T ss_dssp EEEECSHHHHHHHHHHHH
T ss_pred EEEEcCHHHHHHHHHHhc
Confidence 999999999999999874
No 16
>2vri_A Non-structural protein 3; RNA replication, nucleotide-binding, endonuclease, macro domain, viral protein, ATP-binding, exonuclease; 1.8A {Human coronavirus NL63}
Probab=100.00 E-value=2.3e-35 Score=279.44 Aligned_cols=157 Identities=17% Similarity=0.198 Sum_probs=140.9
Q ss_pred CCCCCCCcccccCCCCEEEEEEcCccce----ecCEEEEcCCcCCCCCCc-hHHHHHhhChhHHHHHHHh----CCCCCC
Q 008682 68 GNGMVSRFPVDHEINSKIYLWRGNPWNL----EVDTVVNSTNENLDEAHS-SPGLHAAAGPGLAEECATL----GGCRTG 138 (557)
Q Consensus 68 ~~~~~~~f~~~~~~n~~I~i~~GDIt~~----~vDaIVNsaN~~l~~~~g-~~aI~~aaG~~l~~e~~~~----~~~~~G 138 (557)
+.....+|.. +.+|.+++||||++ ++|||||+||++|.+||| +++|++++|++|++||+++ ++|++|
T Consensus 6 ~~~~~~pf~~----~~~i~i~~GDIt~~~~~~~~DaIVNaaN~~l~~ggGv~~AI~~aaG~~l~~ec~~~~~~~g~~~~G 81 (174)
T 2vri_A 6 AAPFTKPFAV----YKNVKFYLGDISHLVNCVSFDFVVNAANENLLHGGGVARAIDILTEGQLQSLSKDYISSNGPLKVG 81 (174)
T ss_dssp TTEECCCSEE----ETTEEEEESCHHHHTTTSCCSEEEEEECTTCCCCSHHHHHHHHHTTTHHHHHHHHHHHHHCSCCTT
T ss_pred CCCcCCccCC----CCeEEEEeccccccccCCCccEEEECCCccCCCCCcHhHHHHHHhhHHHHHHHHHHHHhcCCCCCC
Confidence 3445667765 57899999999999 999999999999998887 5899999999999999874 899999
Q ss_pred CEEEcccCCCCCCeEEEEcCCCCCCcchhhHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHH
Q 008682 139 MAKVTNAYDLPARRVIHTVGPKYAVKYHTAAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVR 218 (557)
Q Consensus 139 ~~~vT~~~~L~~k~IIH~VgP~~~~~~~~~~~~~L~~~y~~~L~~a~e~~~~SIAfP~I~tG~~g~p~~~~A~i~l~ai~ 218 (557)
++++|++++| ||||+|||.|... ..+.|++||++||++ + +|||||+||||++|||++++|++|+++++
T Consensus 82 ~a~iT~~~~l---~VIH~vgP~~~~~----~~~~L~~~y~~~L~~---~--~SIAfP~IstG~~g~p~~~aa~i~~~~v~ 149 (174)
T 2vri_A 82 AGVMLECEKF---NVFNVVGPRTGKH----EHSLLVEAYNSILFE---N--GIPLMPLLSCGIFGVRIENSLKALFSCDI 149 (174)
T ss_dssp CEEEEECSSC---EEEEEECCCSSTT----HHHHHHHHHHHHHHS---S--SCEEEECSSCGGGCCCHHHHHHHHHTSCC
T ss_pred eEEEEECCCC---EEEEEcCCCCCcc----hHHHHHHHHHHHHhh---C--CcEEeCccccCCCCCCHHHHHHHHHHHHh
Confidence 9999999998 9999999999532 468999999999985 3 49999999999999999999999999997
Q ss_pred HHHHHcCCCccEEEEEecChhhHHHHHHHcc
Q 008682 219 RFLEKQKDKISAVVFCTTTASDTEIYKRLLP 249 (557)
Q Consensus 219 ~fl~~~~~~i~~V~~v~~~~~~~~~y~~~l~ 249 (557)
+ ++|+|+++++.++++|+++|+
T Consensus 150 ~---------~~V~~v~f~~~~~~~~~~~l~ 171 (174)
T 2vri_A 150 N---------KPLQVFVYSSNEEQAVLKFLD 171 (174)
T ss_dssp C---------SCEEEEECSHHHHHHHHHHHH
T ss_pred h---------CcEEEEEcCHHHHHHHHHHHh
Confidence 6 579999999999999999884
No 17
>3ejf_A Non-structural protein 3; IBV, coronavirus, X-domain, macro domain, NSP3, ADRP, hydrolase, ribosomal frameshifting; 1.60A {Avian infectious bronchitis virus} PDB: 3eke_A* 3ewo_A 3ewp_A*
Probab=100.00 E-value=1.9e-34 Score=272.08 Aligned_cols=155 Identities=13% Similarity=0.160 Sum_probs=133.9
Q ss_pred cccCCCCEEEEEEcCccceecC--------EEEEcCCcCCCCCCc-hHHHHHhhChhHHHHHHHh----CCCCCCCEEEc
Q 008682 77 VDHEINSKIYLWRGNPWNLEVD--------TVVNSTNENLDEAHS-SPGLHAAAGPGLAEECATL----GGCRTGMAKVT 143 (557)
Q Consensus 77 ~~~~~n~~I~i~~GDIt~~~vD--------aIVNsaN~~l~~~~g-~~aI~~aaG~~l~~e~~~~----~~~~~G~~~vT 143 (557)
.....+.+|++|+||||++++| ||||+||++|.++|| ++||+++||++|++||+++ |+|+ +++|
T Consensus 8 ~~~~~~~~i~v~~GDIt~~~vDa~~~~~~DaIVNaAN~~L~~ggGV~~AI~~aaG~~l~~ec~~~~~~~g~~~---a~iT 84 (176)
T 3ejf_A 8 CEKPKFLEYKTCVGDLTVVIAKALDEFKEFCIVNAANEHMTHGSGVAKAIADFCGLDFVEYCEDYVKKHGPQQ---RLVT 84 (176)
T ss_dssp --CCSSCEEEEEESCHHHHHHHHHHHHSSEEEEEECCTTCCCCSHHHHHHHHHHCHHHHHHHHHHHHHHCCCS---EEEE
T ss_pred ccCCCCceEEEEeeeCeEEeecccccCCCCEEEeCCCcccCCCchHHHHHHHHhhHHHHHHHHHHHHhcCCCC---eeec
Confidence 3455778999999999999765 599999999998887 5899999999999999886 7887 9999
Q ss_pred ccCCCCCCeEEEEcCCCCCCcchhhHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHHHHHH
Q 008682 144 NAYDLPARRVIHTVGPKYAVKYHTAAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEK 223 (557)
Q Consensus 144 ~~~~L~~k~IIH~VgP~~~~~~~~~~~~~L~~~y~~~L~~a~e~~~~SIAfP~I~tG~~g~p~~~~A~i~l~ai~~fl~~ 223 (557)
.|++|++++|||+|||.|..+ ..++.|++||++||+ ++++|||||+||||++|||++++|++|+++++.
T Consensus 85 ~G~~l~t~~VIHtVGP~~~~~---~~~~~L~~~y~~~L~----~~~~SIAfPaIstGi~g~P~~~aA~ia~~~v~~---- 153 (176)
T 3ejf_A 85 PSFVKGIQCVNNVVGPRHGDN---NLHEKLVAAYKNVLV----DGVVNYVVPVLSLGIFGVDFKMSIDAMREAFEG---- 153 (176)
T ss_dssp CCCSTTEEEEEEECCCCTTCS---CHHHHHHHHHHTTCC----TTCCEEEEECCCTTSTTCCHHHHHHHHHHHHTT----
T ss_pred ccccccCCEEEEeCCCCCCCc---cHHHHHHHHHHHHHH----cCCcEEEECccccCCCCCCHHHHHHHHHHHhhh----
Confidence 999999999999999999653 246799999999998 999999999999999999999999999999983
Q ss_pred cCCCccEEEEEecChhhHHHHHHHc
Q 008682 224 QKDKISAVVFCTTTASDTEIYKRLL 248 (557)
Q Consensus 224 ~~~~i~~V~~v~~~~~~~~~y~~~l 248 (557)
..-+|++..+|.+.+++|+.++
T Consensus 154 ---~~v~v~~~~~D~e~~~~~~~~~ 175 (176)
T 3ejf_A 154 ---CTIRVLLFSLSQEHIDYFDVTC 175 (176)
T ss_dssp ---CCCEEEEEESCHHHHHHHHHTC
T ss_pred ---cceEEEEEcCCHHHHHHHHHHh
Confidence 1224555556688888888765
No 18
>1njr_A 32.1 kDa protein in ADH3-RCA1 intergenic region; structural genomics, dimer, two domain organization, PSI, PR structure initiative; HET: XYL; 1.90A {Saccharomyces cerevisiae} SCOP: c.50.1.2 PDB: 1txz_A* 1ty8_A*
Probab=100.00 E-value=1.2e-34 Score=292.75 Aligned_cols=173 Identities=11% Similarity=0.061 Sum_probs=147.8
Q ss_pred CCEEEEEEcCccce-------------ecCEEEEcCCcCCCCCCc-hHHHHHhhC-hhHHHHHHHh---CCCCCCCEEEc
Q 008682 82 NSKIYLWRGNPWNL-------------EVDTVVNSTNENLDEAHS-SPGLHAAAG-PGLAEECATL---GGCRTGMAKVT 143 (557)
Q Consensus 82 n~~I~i~~GDIt~~-------------~vDaIVNsaN~~l~~~~g-~~aI~~aaG-~~l~~e~~~~---~~~~~G~~~vT 143 (557)
+.+|.|++||||++ ++|||||+||+.+.+||| ++||++++| +.+++||+++ |.|++|++++|
T Consensus 44 ~~~i~i~~GDIt~l~~~~~~~~~~~~~~vDAIVNaANs~l~~gGGVd~AI~raaGg~~l~~ec~~~~~~g~~~~G~a~iT 123 (284)
T 1njr_A 44 DKYLCIHHGHLQSLMDSMRKGDAIHHGHSYAIVSPGNSYGYLGGGFDKALYNYFGGKPFETWFRNQLGGRYHTVGSATVV 123 (284)
T ss_dssp -CCEEEEESCHHHHHHHHHTTCC----CCEEEEECCBTTCCCCSSHHHHHHHHHTSHHHHHHHHHHTTTSCCCTTCCEEE
T ss_pred CCEEEEEeCCHhhhhhhccccccccCCCccEEEeCCCCCCCCCchHHHHHHHhhCcHHHHHHHHHHHhcCCCCCCeEEEE
Confidence 46899999999999 899999999999998887 589999975 7889999884 88999999999
Q ss_pred ccC----------CCCCCeEEEEcCCCCCCcc--hh-----hHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCCh
Q 008682 144 NAY----------DLPARRVIHTVGPKYAVKY--HT-----AAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPR 206 (557)
Q Consensus 144 ~~~----------~L~~k~IIH~VgP~~~~~~--~~-----~~~~~L~~~y~~~L~~a~e~~~~SIAfP~I~tG~~g~p~ 206 (557)
++| +|+||||||||||+|..+. .+ ...+.|++||++||++| +++++|||||+||||++|||+
T Consensus 124 ~~~~~~~~~~~~~~L~~k~VIHtvgp~~~~~~~~d~~~p~~~~~~~L~~~~~~~L~~a-e~~i~SIAfPaIsTGv~G~P~ 202 (284)
T 1njr_A 124 DLQRCLEEKTIECRDGIRYIIHVPTVVAPSAPIFNPQNPLKTGFEPVFNAMWNALMHS-PKDIDGLIIPGLCTGYAGVPP 202 (284)
T ss_dssp EGGGGGCC----CCTTEEEEEECCCBSCSSSCSCCTTCHHHHTHHHHHHHHHHHHHTS-CTTCSEEEECCTTCSTTCCCH
T ss_pred ECCcccccccchhcCCCCEEEEeCCCccCCCCCcccccccccHHHHHHHHHHHHHHHH-HhCCCEEEECcccccCCCCCH
Confidence 999 9999999999999997652 11 23578999999999999 999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCC---CccEEEEEecChhhHHHHHHHccccCCCChhHHHHHh
Q 008682 207 EPAAHVAIRTVRRFLEKQKD---KISAVVFCTTTASDTEIYKRLLPLYFPRDKHEEEVAI 263 (557)
Q Consensus 207 ~~~A~i~l~ai~~fl~~~~~---~i~~V~~v~~~~~~~~~y~~~l~~yfpr~~~e~~~~~ 263 (557)
+++|++|+++++.|+..++. .++.|+||.+ +.+ ...|++++..||..++
T Consensus 203 ~~aA~i~~~av~~f~~~~~~s~~~~~~vi~~~~-~~~-------~~~~~~~~~~ee~~~~ 254 (284)
T 1njr_A 203 IISCKSMAFALRLYMAGDHISKELKNVLIMYYL-QYP-------FEPFFPESCKIECQKL 254 (284)
T ss_dssp HHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHT-TCC-------CGGGSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCcccccceEEEEEEC-HHH-------HHHHHhhhHHHHHHHh
Confidence 99999999999999987652 2345666554 443 4557888888887765
No 19
>3pg7_A Neurofibromin; SEC lipid binding domain, PH domain, lipid binding protein; HET: PTY; 2.19A {Homo sapiens} PDB: 2e2x_A* 3p7z_A* 2d4q_A*
Probab=100.00 E-value=3.6e-33 Score=280.01 Aligned_cols=154 Identities=17% Similarity=0.280 Sum_probs=146.1
Q ss_pred CCChHHHhhccceEecccCCCCCeEEEEEeeeccCCCCCHHHHHHHHHHHcccccCCCEEEEEEcCCCCcCCCCcHHHHH
Q 008682 386 SLNLSEIAEMKIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVVKEFEPLIQKPYSIVYFHSAASLQLQPDLGWMR 465 (557)
Q Consensus 386 ~~d~~~i~~~~i~y~~G~Dk~GRPVvvv~~~~~~~~~~d~e~ll~yvi~~Ld~~~~~~y~iV~d~t~~s~~n~p~~~~Lk 465 (557)
++||++|+++++||++|+|++||||||+++++++...+|+|.|++|+++++++++.++|++|||||+++..|.|+++||+
T Consensus 1 ~ed~~~i~~~~ify~~G~d~dGrpViv~~~~~l~~~~~D~e~Ll~~vl~tl~~~~~~~y~lV~d~T~~~~~n~p~~~wl~ 80 (256)
T 3pg7_A 1 KEEFKALKTLSIFYQAGTSKAGNPIFYYVARRFKTGQINGDLLIYHVLLTLKPYYAKPYEIVVDLTHTGPSNRFKTDFLS 80 (256)
T ss_dssp CTTTTTHHHHTSEEEEEECTTSCEEEEEEGGGCCBTTBCHHHHHHHHHHHHTTTTTSCEEEEEECTTCCGGGCCCHHHHH
T ss_pred CcchhHHHHcCCEEEcCcCCCCCEEEEEEeecCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEECCCCCcccCCcHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHhccccEEEEECCChhHHHHHHhh-ccccCCc---eEEEeCChhHHhhcCCCCCCCCChHHHHhhhhhc
Q 008682 466 RLQQVLGRKHQRNLHAIYVLHPTFHLKATIFTL-QLLVDNV---KVVYVDRLLQLFRYVPREQLTIPDFVFQHDLEVN 539 (557)
Q Consensus 466 ~~~~~l~~~y~knLk~iyIvhps~~~k~~~~~l-~pfis~k---KI~~v~sl~eL~~~I~~~qL~iP~~v~~~D~~~~ 539 (557)
++|+++|+++++||+++||||||+|+|.+++.+ ++|.+.+ |++|+++++||.++|+++||.||+.+.++|++++
T Consensus 81 ~~~~llp~~~~kNlk~~Yivnpt~~~k~~~~~~~~~~~~~k~~~Ki~fv~sl~eL~~~i~~~~L~LP~~t~~~~~d~r 158 (256)
T 3pg7_A 81 KWFVVFPGFAYDNVSAVYIYNCNSWVREYTKYHERLLTGLKGSKRLVFIDCPGKLAEHIEHEQQKLPAATLALEEDLK 158 (256)
T ss_dssp HTTTSSCHHHHHTEEEEEEESCCHHHHHHHHHTHHHHTTTTTCTTEEEESSTTGGGGTSCGGGCCCCHHHHHTTSSCE
T ss_pred HHHHHcCHHHHhcccEEEEECCCHHHHHHHHHHhccccccccCCcEEEECCHHHHHhhcCHHHcCCChHHHhhcccce
Confidence 999999999999999999999999999877654 6666545 9999999999999999999999999999999875
No 20
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=99.97 E-value=1.7e-31 Score=282.72 Aligned_cols=155 Identities=19% Similarity=0.253 Sum_probs=140.1
Q ss_pred CEEEEEEcCccceecCEEEEcCCcCCCCCCc-hHHHHHhhChhHHHHHHHhCCCCCCCEEEcccCCCCCCeEEEEcCCCC
Q 008682 83 SKIYLWRGNPWNLEVDTVVNSTNENLDEAHS-SPGLHAAAGPGLAEECATLGGCRTGMAKVTNAYDLPARRVIHTVGPKY 161 (557)
Q Consensus 83 ~~I~i~~GDIt~~~vDaIVNsaN~~l~~~~g-~~aI~~aaG~~l~~e~~~~~~~~~G~~~vT~~~~L~~k~IIH~VgP~~ 161 (557)
..+.|++||||++++|||||+||++|..||| ++|||++||+++.+ +.|++|++++|.|+ +|||||||||.|
T Consensus 344 PsfrIIRgDITk~~vDAIVNAANtsL~gGgGVdGAIhraaG~~ll~-----~~~~tG~AkIT~g~---aKyIIHtVGPvw 415 (670)
T 4gua_A 344 PSYRTKRENIADCQEEAVVNAANPLGRPGEGVCRAIYKRWPTSFTD-----SATETGTARMTVCL---GKKVIHAVGPDF 415 (670)
T ss_dssp CCEEEECSCGGGCCSSEEEEECCTTCCCCSSHHHHHHHHCGGGGTT-----CCCCTTCEEEEEET---TEEEEEECCCCT
T ss_pred cceeEEeccccccccCEEEeCCCCCCCCcCCHhHHHHHHhhHHHhc-----CCCCcceEEEecCC---CceEEEcCCCCc
Confidence 3567999999999999999999999999887 59999999999864 68999999999999 699999999999
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHHHHHHcCCCccEEEEEecChhhH
Q 008682 162 AVKYHTAAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQKDKISAVVFCTTTASDT 241 (557)
Q Consensus 162 ~~~~~~~~~~~L~~~y~~~L~~a~e~~~~SIAfP~I~tG~~g~p~~~~A~i~l~ai~~fl~~~~~~i~~V~~v~~~~~~~ 241 (557)
+++...+..++|++||+++|++|.+++++|||||+||||+||||++ .+++++++|..||+.+. -+|+|+++|.+..
T Consensus 416 ~~g~~~E~~~lLascYrnsLkLA~e~~~kSIAFPLISTGIYG~PKd-al~IAl~~I~~fL~~~D---~dV~IvcfDKkwe 491 (670)
T 4gua_A 416 RKHPEAEALKLLQNAYHAVADLVNEHNIKSVAIPLLSTGIYAAGKD-RLEVSLNCLTTALDRTD---ADVTIYCLDKKWK 491 (670)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEECCTTSSSTTTTSC-CHHHHHHHHHHHHTTSS---CEEEEECSCHHHH
T ss_pred cCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEEccccccCCCCCHH-HHHHHHHHHHHHHhccC---CEEEEEEecChHH
Confidence 9988777668999999999999999999999999999999999987 58999999999998764 2799999988777
Q ss_pred HHHHHHcc
Q 008682 242 EIYKRLLP 249 (557)
Q Consensus 242 ~~y~~~l~ 249 (557)
..+++.+.
T Consensus 492 ~~Ik~ai~ 499 (670)
T 4gua_A 492 ERIDAALQ 499 (670)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77777765
No 21
>3peg_A Neurofibromin; SEC14 domain, pleckstrin homology domain, PH domain, phosphatidylethanolamin binding, lipid binding, lipid bindi protein; HET: PEV; 2.52A {Homo sapiens}
Probab=99.96 E-value=1.1e-29 Score=258.29 Aligned_cols=158 Identities=17% Similarity=0.299 Sum_probs=119.1
Q ss_pred hhhHHHHHHHhcC---CChHHHhhccceEecccCCCCCeEEEEEeeeccCCCCCHHHHHHHHHHHcccccCCCEEEEEEc
Q 008682 374 YSLHSRYLAKANS---LNLSEIAEMKIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVVKEFEPLIQKPYSIVYFH 450 (557)
Q Consensus 374 ~~~~~~~l~~a~~---~d~~~i~~~~i~y~~G~Dk~GRPVvvv~~~~~~~~~~d~e~ll~yvi~~Ld~~~~~~y~iV~d~ 450 (557)
.+.|++||+|++. +++++|++.++||++|+|++||||||+++++++.+.+|+|.|++|+++++++++.++|++||||
T Consensus 5 ~~~~~efM~r~~~~~~e~~~~i~~~~~f~~~g~d~dG~PViv~~~~~~~~~~~D~e~Lly~il~tl~~~~~~~y~lV~D~ 84 (290)
T 3peg_A 5 SSKFEEFMTRHQVHEKEEFKALKTLSIFYQAGTSKAGNPIFYYVARRFKTGQINGDLLIYHVLLTLKPYYAKPYEIVVDL 84 (290)
T ss_dssp -------------------CCGGGTTTEEEEEECTTSCEEEEEEGGGCCBTTBCHHHHHHHHHHHHTTTTTSCEEEEEEC
T ss_pred hHHHHHHHHHhhccChhhhhhhhcCCeEEEeccCCCCCEEEEEEeecCCccCCCHHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 3467899999985 4667788999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcCCCCcHHHHHHHHHHHhHHHhccccEEEEECCChhHHHHH-HhhccccCCc---eEEEeCChhHHhhcCCCCCCC
Q 008682 451 SAASLQLQPDLGWMRRLQQVLGRKHQRNLHAIYVLHPTFHLKATI-FTLQLLVDNV---KVVYVDRLLQLFRYVPREQLT 526 (557)
Q Consensus 451 t~~s~~n~p~~~~Lk~~~~~l~~~y~knLk~iyIvhps~~~k~~~-~~l~pfis~k---KI~~v~sl~eL~~~I~~~qL~ 526 (557)
|+++..|.|+.+|++++++++|++|++||+++||+|||+|+|.++ +++++|.+.+ |++|++++.+|.++|+++|+.
T Consensus 85 T~~~~~n~p~~~~l~~~~~llp~~~~kNl~~~Yi~np~~~f~~~~k~~~~~~~~~k~~~k~v~~~~~~~L~~~i~~~~~~ 164 (290)
T 3peg_A 85 THTGPSNRFKTDFLSKWFVVFPGFAYDNVSAVYIYNCNSWVREYTKYHERLLTGLKGSKRLVFIDCPGKLAEHIEHEQQK 164 (290)
T ss_dssp TTCCGGGCCCHHHHGGGGTSSCHHHHHTEEEEEEESCCHHHHHHHHHTTTTGGGGTTCTTEEEESSSCC-----------
T ss_pred CCCCccCCChHHHHHHHHHHCCHHHHhhccEEEEECCCHHHHHHHHHHHhhhhhhhcCceEEEcCCHHHHHhhCCHHHhc
Confidence 999999999999999999999999999999999999999999976 4556666554 999999999999999999888
Q ss_pred CChHH
Q 008682 527 IPDFV 531 (557)
Q Consensus 527 iP~~v 531 (557)
+|+.+
T Consensus 165 lp~~~ 169 (290)
T 3peg_A 165 LPAAT 169 (290)
T ss_dssp -----
T ss_pred Ccccc
Confidence 86543
No 22
>2jyc_A Uncharacterized protein C6ORF130; macro domain, A1PP domain, BC011709, protein structure initiative, PSI-2; NMR {Homo sapiens} PDB: 2lgr_A
Probab=99.92 E-value=2.2e-24 Score=201.41 Aligned_cols=130 Identities=15% Similarity=0.161 Sum_probs=115.0
Q ss_pred CCCEEEEEEcCcccee-cCEEEEcCCcCCCCCCc-hHHHHHhhChhHHHHHHHhCCCCCCCEEEcccCCCCCCeEEEEcC
Q 008682 81 INSKIYLWRGNPWNLE-VDTVVNSTNENLDEAHS-SPGLHAAAGPGLAEECATLGGCRTGMAKVTNAYDLPARRVIHTVG 158 (557)
Q Consensus 81 ~n~~I~i~~GDIt~~~-vDaIVNsaN~~l~~~~g-~~aI~~aaG~~l~~e~~~~~~~~~G~~~vT~~~~L~~k~IIH~Vg 158 (557)
.+.+|++++||||+.+ +|||||++|+.+.+|+| +++|++++| ++ .||.+ +++++|++++|+++ ++||||+||
T Consensus 18 ~~~~i~~v~GDIt~~~~~daIVnaaN~~~~~GgGVa~ai~~~~p-~~-~e~~~-~~~~~G~a~it~~~---~~~Vih~vg 91 (160)
T 2jyc_A 18 EGSRITYVKGDLFACPKTDSLAHCISEDCRMGAGIAVLFKKKFG-GV-QELLN-QQKKSGEVAVLKRD---GRYIYYLIT 91 (160)
T ss_dssp CSCSEEEEESCSSSSCSSCEEEEEECTTCCCCSSTHHHHHHHHC-CH-HHHHH-HCCCTTCEEEEEET---TEEEEEEEC
T ss_pred CCceEEEEeCcCCCCCCCCEEEEccCCcCCCCCcHHHHHHHHCh-HH-HHHhc-cCCCCCcEEEEecC---CcEEEEEec
Confidence 4578999999999998 79999999999998877 589999995 45 68876 68999999999985 699999999
Q ss_pred CC-CCCcchhhHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHH
Q 008682 159 PK-YAVKYHTAAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRR 219 (557)
Q Consensus 159 P~-~~~~~~~~~~~~L~~~y~~~L~~a~e~~~~SIAfP~I~tG~~g~p~~~~A~i~l~ai~~ 219 (557)
|. |.... ..+.|++||+++++.|.+++++|||||+||||++|+|+++++++|.+++.+
T Consensus 92 ~~~~~~~~---~~~~l~~~l~~~l~~a~~~~~~sIa~P~IgtGi~G~p~~~v~~ii~~~~~~ 150 (160)
T 2jyc_A 92 KKRASHKP---TYENLQKSLEAMKSHCLKNGVTDLSMPRIGCGLDRLQWENVSAMIEEVFEA 150 (160)
T ss_dssp SSSTTSCC---CHHHHHHHHHHHHHHHHHHTCCEEEEESCCSSCSSSCHHHHHHHHHHHHTT
T ss_pred CCCCCCCC---hHHHHHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCHHHHHHHHHHHHhh
Confidence 98 65422 257899999999999999999999999999999999999999999887754
No 23
>2eee_A Uncharacterized protein C6ORF130; macro domain, A1PP domain, ADP-ribose binding, rossmann fold, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l8r_A*
Probab=99.91 E-value=1.9e-24 Score=199.73 Aligned_cols=130 Identities=14% Similarity=0.135 Sum_probs=114.2
Q ss_pred CCCEEEEEEcCcccee-cCEEEEcCCcCCCCCCc-hHHHHHhhChhHHHHHHHhCCCCCCCEEEcccCCCCCCeEEEEcC
Q 008682 81 INSKIYLWRGNPWNLE-VDTVVNSTNENLDEAHS-SPGLHAAAGPGLAEECATLGGCRTGMAKVTNAYDLPARRVIHTVG 158 (557)
Q Consensus 81 ~n~~I~i~~GDIt~~~-vDaIVNsaN~~l~~~~g-~~aI~~aaG~~l~~e~~~~~~~~~G~~~vT~~~~L~~k~IIH~Vg 158 (557)
.+.+|++++|||++.+ +|||||++|..+.+|+| +++|++++ |++ .||.+ +.+++|++++|+++ ++||||++|
T Consensus 7 ~~~~i~~v~GDIt~~~~~daIVnaaN~~~~~G~Gva~ai~~~~-p~~-~~~~~-~~~~~G~a~it~~~---~~~Vih~v~ 80 (149)
T 2eee_A 7 GGSRITYVKGDLFACPKTDSLAHCISEDCRMGAGIAVLFKKKF-GGV-QELLN-QQKKSGEVAVLKRD---GRYIYYLIT 80 (149)
T ss_dssp SSCCCEEECSCSSSSCSSCEEEEEEETTCCCCSTTHHHHHHHT-CCH-HHHHT-TCCCTTCEEEEESS---SSEEEEEEE
T ss_pred CCeeEEEEecccccCCCCcEEEEEeCCCCCcCCcHHHHHHHHC-cHH-HHHhc-ccCCCccEEEEEcC---CCEEEEEEe
Confidence 4568999999999998 79999999999998876 68999988 555 67765 68999999999985 799999999
Q ss_pred CC-CCCcchhhHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHH
Q 008682 159 PK-YAVKYHTAAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRR 219 (557)
Q Consensus 159 P~-~~~~~~~~~~~~L~~~y~~~L~~a~e~~~~SIAfP~I~tG~~g~p~~~~A~i~l~ai~~ 219 (557)
|. |.... ..+.|++||+++|+.|.+++++|||||+||||++|+|+++++++|.+++.+
T Consensus 81 ~~~~~~~~---~~~~l~~~l~~~l~~a~~~~~~sIa~P~IgtG~~G~~~~~v~~ii~~~~~~ 139 (149)
T 2eee_A 81 KKRASHKP---TYENLQKSLEAMKSHCLKNGVTDLSMPRIGCGLDRLQWENVSAMIEEVFEA 139 (149)
T ss_dssp ESSTTSCC---CHHHHHHHHHHHHHHHHHHTCCEEECCCCCCTTTTCCHHHHHHHHHHHHTT
T ss_pred cCCCCCCC---CHHHHHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCHHHHHHHHHHHhcc
Confidence 98 65422 257899999999999999999999999999999999999999999887653
No 24
>2fg1_A Conserved hypothetical protein BT1257; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.25A {Bacteroides thetaiotaomicron} SCOP: c.50.1.2 PDB: 2afc_A
Probab=99.88 E-value=1.3e-22 Score=189.21 Aligned_cols=132 Identities=13% Similarity=0.071 Sum_probs=112.5
Q ss_pred CEEEEEEcCccc---eecCEEEEcCCcCCCCCCc-hHHHHHhhChhHHHHHH----HhCCCCCCCEEEcccCCCCCCeEE
Q 008682 83 SKIYLWRGNPWN---LEVDTVVNSTNENLDEAHS-SPGLHAAAGPGLAEECA----TLGGCRTGMAKVTNAYDLPARRVI 154 (557)
Q Consensus 83 ~~I~i~~GDIt~---~~vDaIVNsaN~~l~~~~g-~~aI~~aaG~~l~~e~~----~~~~~~~G~~~vT~~~~L~~k~II 154 (557)
..|++++|||++ .++|||||++|..+.+|+| +.+|++++ |++.++|+ +.+++++|++++|+++. .+|||
T Consensus 4 M~i~~v~GDit~~~~~~~daIvn~~N~~~~~G~Gva~ai~~~~-p~~~~~~~~~~~~~~~~~~G~~~i~~~~~--~~~Vi 80 (158)
T 2fg1_A 4 MEILYIKGDATAPIGSGVKVITHICNDIGGWGKGFVLALSKKW-KMPEEAYRQWYKSQEEFTLGAVQFVNVEN--KLYVA 80 (158)
T ss_dssp CCCEEEESCTTSCCSSSCEEEEEEEETTCCCCSTHHHHHHHHC-SHHHHHHHHHHHHTSSCSTTCEEEEEEET--TEEEE
T ss_pred eEEEEEecccCCCCCCCCeEEEEEecCCCCcCccHHHHHHHHC-ChHHHHHHHHHhhccCcCCccEEEEecCC--CeEEE
Confidence 479999999999 7889999999999998887 58999888 78877755 45799999999999842 49999
Q ss_pred EEcCCC-CCCcchh---hHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHH
Q 008682 155 HTVGPK-YAVKYHT---AAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVR 218 (557)
Q Consensus 155 H~VgP~-~~~~~~~---~~~~~L~~~y~~~L~~a~e~~~~SIAfP~I~tG~~g~p~~~~A~i~l~ai~ 218 (557)
|++||. |..+... ...+.|++||+++++.|.+++. |||||.||||++|+|.+++++++.+++.
T Consensus 81 ~~v~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~a~~~~~-sIa~P~Ig~G~~G~~w~~v~~ii~~~l~ 147 (158)
T 2fg1_A 81 NMIGQHGIYKDSKGLPPIRYDAVRQCLKEVALFTIAHKA-SVHMPRIGCGLAGGKWELMEQIIKEELI 147 (158)
T ss_dssp EEEEESSSSCCTTCCCSBCHHHHHHHHHHHHHHHHHHTC-EEEECCTTCSTTCCCHHHHHHHHHHHTG
T ss_pred EEEEEcccCCCCCCCccccHHHHHHHHHHHHHHHHHhCC-eEEecCcCCCCCCCCHHHHHHHHHHHhc
Confidence 999999 7543211 2357899999999999999997 9999999999999999999988766654
No 25
>3hx3_A Retinaldehyde-binding protein 1; lipid transfer protein, 11-CIS-retinal, bothnia dystrophy, acetylation, cytoplasm, disease mutation; HET: RET; 1.69A {Homo sapiens} PDB: 3hy5_A*
Probab=99.70 E-value=3.6e-17 Score=168.82 Aligned_cols=136 Identities=15% Similarity=0.182 Sum_probs=119.9
Q ss_pred HHhhccce-EecccCCCCCeEEEEEeeeccCCCCCHHHHHHHHHHHcccccC------CCEEEEEEcCCCCcCCC--CcH
Q 008682 391 EIAEMKIV-YRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVVKEFEPLIQ------KPYSIVYFHSAASLQLQ--PDL 461 (557)
Q Consensus 391 ~i~~~~i~-y~~G~Dk~GRPVvvv~~~~~~~~~~d~e~ll~yvi~~Ld~~~~------~~y~iV~d~t~~s~~n~--p~~ 461 (557)
.+.+.|++ +..|+|++||||++++.+++++...+.+.++.+++..+|.++. ..+++|+|++|++..+. .+.
T Consensus 137 ~~l~~g~~~~l~g~Dk~GrpVii~r~g~~d~~~~~~~~~~r~~~~~lE~~l~~~~~~v~g~v~IiD~~g~sl~~~~~~~~ 216 (316)
T 3hx3_A 137 CTIEAGYPGVLSSRDKYGRVVMLFNIENWQSQEITFDEILQAYCFILEKLLENEETQINGFCIIENFKGFTMQQAASLRT 216 (316)
T ss_dssp HHHHTTSSEECSSCCTTSCEEEEEECTTCCTTTSCHHHHHHHHHHHHHHHTTSHHHHHHCEEEEEECTTCCHHHHHHCCH
T ss_pred HHHHcCCccccCCCCCCCCEEEEEecccCCCCCCCHHHHHHHHHHHHHHHHhcccCCcceEEEEEECCCCCHHHhccCCh
Confidence 33456775 4459999999999999999998888999999999988887765 35999999999987543 567
Q ss_pred HHHHHHHHHHhHHHhccccEEEEECCChhHHHHHHhhccccCCc---eEEEe-CChhHHhhcCCCCCCC
Q 008682 462 GWMRRLQQVLGRKHQRNLHAIYVLHPTFHLKATIFTLQLLVDNV---KVVYV-DRLLQLFRYVPREQLT 526 (557)
Q Consensus 462 ~~Lk~~~~~l~~~y~knLk~iyIvhps~~~k~~~~~l~pfis~k---KI~~v-~sl~eL~~~I~~~qL~ 526 (557)
+++|++..+++.+|+++|+++||||++|+|+++|++++||++++ ||+++ +++++|.++||+++|+
T Consensus 217 ~~~k~~~~~lq~~YPerL~~i~iiN~P~~f~~i~~ivkpfl~~kt~~KI~~~~~~~~~L~~~I~~~~LP 285 (316)
T 3hx3_A 217 SDLRKMVDMLQDSFPAWFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERVFVHGDDLSGFYQEIDENILP 285 (316)
T ss_dssp HHHHHHHHHHHTTSTTTEEEEEEESCCTTHHHHHHHHGGGCCHHHHTTEEEEETCCHHHHHHSCGGGSB
T ss_pred HHHHHHHHHHHHhhhhhhceEEEEeCCHHHHHHHHHHHHhCCHHhhhheEEeCCCHHHHHhhCCHhhCc
Confidence 89999999999999999999999999999999999999999998 99999 5789999999998874
No 26
>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A*
Probab=99.68 E-value=6.1e-17 Score=161.87 Aligned_cols=135 Identities=10% Similarity=0.116 Sum_probs=117.2
Q ss_pred HHhhccce-EecccCCCCCeEEEEEeeeccCCCCCHHHHHHHHHHHcccccC------CCEEEEEEcCCCCcCCC--CcH
Q 008682 391 EIAEMKIV-YRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVVKEFEPLIQ------KPYSIVYFHSAASLQLQ--PDL 461 (557)
Q Consensus 391 ~i~~~~i~-y~~G~Dk~GRPVvvv~~~~~~~~~~d~e~ll~yvi~~Ld~~~~------~~y~iV~d~t~~s~~n~--p~~ 461 (557)
.+.+.|++ +..|+|++||||++++.++++++..+.+.++.+++.++|.++. ..+++|+|++|++..+. +..
T Consensus 78 ~~~~~g~~~~l~g~D~~GrpV~i~~~~~~d~~~~~~~~~~r~~~~~~E~~~~~~~~~~~g~~~I~D~~g~s~~~~~~~~~ 157 (262)
T 1r5l_A 78 GLLKAGYHGVLRSRDPTGSKVLIYRIAHWDPKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQFSHAFQITP 157 (262)
T ss_dssp HHHHTTCEEECSSCCTTCCEEEEEEGGGCCTTTSCHHHHHHHHHHHHHHHTTSHHHHHHCEEEEEECTTCCHHHHHHCCH
T ss_pred HHHHcCCccCCCCcCCCCCEEEEEeccccCcccCCHHHHHHHHHHHHHHHHhChhhcccceEEEEECCCCCHHHHhccCH
Confidence 34456654 5569999999999999999988888888888888888776654 34899999999987653 567
Q ss_pred HHHHHHHHHHhHHHhccccEEEEECCChhHHHHHHhhccccCCc---eEEEeCC--hhHHhhcCCCCCCC
Q 008682 462 GWMRRLQQVLGRKHQRNLHAIYVLHPTFHLKATIFTLQLLVDNV---KVVYVDR--LLQLFRYVPREQLT 526 (557)
Q Consensus 462 ~~Lk~~~~~l~~~y~knLk~iyIvhps~~~k~~~~~l~pfis~k---KI~~v~s--l~eL~~~I~~~qL~ 526 (557)
++++++..+++.+|+++|+++||||+||+|+++|++++||++++ ||+++.+ .++|.++|| ++|+
T Consensus 158 ~~~k~~~~~~q~~yPerl~~i~ivN~P~~f~~~~~~vkpfl~~~t~~Ki~~~~~~~~~~L~~~i~-~~LP 226 (262)
T 1r5l_A 158 SVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFP-DILP 226 (262)
T ss_dssp HHHHHHHHHHHTSSSSCEEEEEEESCCGGGHHHHHHHGGGSCHHHHTTEEECCSSCHHHHHHHST-TTSC
T ss_pred HHHHHHHHHHHhhCChhhceEEEEeCCHHHHHHHHHHHHhcCHHHHhheEEeCCCcHHHHHHHhh-hhCc
Confidence 89999999999999999999999999999999999999999999 9999954 789999999 8774
No 27
>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1
Probab=99.66 E-value=1.5e-16 Score=162.36 Aligned_cols=136 Identities=18% Similarity=0.291 Sum_probs=112.7
Q ss_pred HHhhccceEecccCCCCCeEEEEEeeeccCC----CCCHHHHHHHHHHHccccc--------------CCCEEEEEEcCC
Q 008682 391 EIAEMKIVYRGGVDSEGRPVMVVVGAHFLLR----CLDLERFVLYVVKEFEPLI--------------QKPYSIVYFHSA 452 (557)
Q Consensus 391 ~i~~~~i~y~~G~Dk~GRPVvvv~~~~~~~~----~~d~e~ll~yvi~~Ld~~~--------------~~~y~iV~d~t~ 452 (557)
.+.+....|..|+|++||||++++.+++++. ..+.+.++.+++..++.++ .+.+++|+|++|
T Consensus 99 ~~~~~~~~~~~g~Dk~GrpV~i~~~g~~d~~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~s~~~g~~v~~~~~I~D~~g 178 (296)
T 1aua_A 99 LIAKFYPQYYHKTDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNLVWEYESVVQYRLPACSRAAGHLVETSCTIMDLKG 178 (296)
T ss_dssp HHGGGSCCEEEEECTTSCEEEEECGGGCCHHHHTTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTSCCCCEEEEEECTT
T ss_pred HHHHhCCceecccCCCCCEEEEEeeccCChHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeEEEEEECCC
Confidence 3333333466799999999999998887653 3578888888777665432 345999999999
Q ss_pred CCcCCCCc-HHHHHHHHHHHhHHHhccccEEEEECCChhHHHHHHhhccccCCc---eEEEeCC--hhHHhhcCCCCCCC
Q 008682 453 ASLQLQPD-LGWMRRLQQVLGRKHQRNLHAIYVLHPTFHLKATIFTLQLLVDNV---KVVYVDR--LLQLFRYVPREQLT 526 (557)
Q Consensus 453 ~s~~n~p~-~~~Lk~~~~~l~~~y~knLk~iyIvhps~~~k~~~~~l~pfis~k---KI~~v~s--l~eL~~~I~~~qL~ 526 (557)
++..+.+. .++++++..+++.+|+++|+++||||++|+|+++|++++||++++ ||+++.+ .++|.++|++++|+
T Consensus 179 ~s~~~~~~~~~~~k~~~~~~q~~YPerl~~i~iiN~P~~f~~~~~iikpfl~~~t~~KI~~~~~~~~~~L~~~i~~~~LP 258 (296)
T 1aua_A 179 ISISSAYSVMSYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGSSYQKELLKQIPAENLP 258 (296)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEESCCHHHHHHHHHHGGGSCHHHHTTEEECCSCCHHHHTTTSCSSSSB
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhHHHhhCeEEEECchHHHHHHHHHHHhhcCHhhcceEEEeCcccHHHHHhhCCHhhCc
Confidence 98765443 678999999999999999999999999999999999999999998 9999965 78899999998763
No 28
>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E*
Probab=99.63 E-value=7.1e-16 Score=164.10 Aligned_cols=128 Identities=13% Similarity=0.187 Sum_probs=111.7
Q ss_pred EecccCCCCCeEEEEEeeeccCC----CCCHHHHHHHHHHHccccc-------------CCCEEEEEEcCCCCcCCC--C
Q 008682 399 YRGGVDSEGRPVMVVVGAHFLLR----CLDLERFVLYVVKEFEPLI-------------QKPYSIVYFHSAASLQLQ--P 459 (557)
Q Consensus 399 y~~G~Dk~GRPVvvv~~~~~~~~----~~d~e~ll~yvi~~Ld~~~-------------~~~y~iV~d~t~~s~~n~--p 459 (557)
+..|+|++||||++++.+++++. ..+.+.++++++..+|.++ ...+++|+|++|++..+. +
T Consensus 87 ~~~g~Dk~GrpV~~~~~g~~d~~~l~~~~~~~~~~r~~~~~~E~~~~~~~~~s~~~g~~v~~~~~I~D~~g~sl~~~~~~ 166 (403)
T 1olm_A 87 GMCGYDLDGCPVWYDIIGPLDAKGLLFSASKQDLLRTKMRECELLLQECAHQTTKLGRKVETITIIYDCEGLGLKHLWKP 166 (403)
T ss_dssp EEEEECTTSCEEEEEECTTCCHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCEEEEEECTTCCGGGGCHH
T ss_pred eeeccCCCcCEEEEEecCCCChHHhhccCCHHHHHHHHHHHHHHHHHHHHhhHHhhCCcccceEEEEECCCCCHHHHhhH
Confidence 34699999999999999988765 4688888888888776543 256999999999997654 4
Q ss_pred cHHHHHHHHHHHhHHHhccccEEEEECCChhHHHHHHhhccccCCc---eEEEeCC--hhHHhhcCCCCCCC
Q 008682 460 DLGWMRRLQQVLGRKHQRNLHAIYVLHPTFHLKATIFTLQLLVDNV---KVVYVDR--LLQLFRYVPREQLT 526 (557)
Q Consensus 460 ~~~~Lk~~~~~l~~~y~knLk~iyIvhps~~~k~~~~~l~pfis~k---KI~~v~s--l~eL~~~I~~~qL~ 526 (557)
.+.+++++..+++.+|+++|+++||||+||+|+++|++++||++++ ||+++.+ .++|.++|++++|+
T Consensus 167 ~~~~~k~~~~~lq~~YPerl~~i~iiN~P~~f~~i~~~ikpfl~~~t~~KI~~~~~~~~~~L~~~I~~~~LP 238 (403)
T 1olm_A 167 AVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGANWKEVLLKHISPDQVP 238 (403)
T ss_dssp HHHHHHHHHHHHHHHSTTCEEEEEEESCCTTHHHHHHHHGGGSCHHHHHTEEECCTTHHHHHTTTSCGGGSB
T ss_pred HHHHHHHHHHHHHhhCcHhhCeEEEEeCCHHHHHHHHHHHhhcCHhhhceEEEEChhHHHHHHhhcChhhCc
Confidence 6789999999999999999999999999999999999999999998 9999965 67899999998763
No 29
>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A*
Probab=99.62 E-value=6.8e-16 Score=159.57 Aligned_cols=135 Identities=20% Similarity=0.313 Sum_probs=112.8
Q ss_pred HhhccceEecccCCCCCeEEEEEeeeccCCC----CCHHHHHHHHHHHccccc--------------CCCEEEEEEcCCC
Q 008682 392 IAEMKIVYRGGVDSEGRPVMVVVGAHFLLRC----LDLERFVLYVVKEFEPLI--------------QKPYSIVYFHSAA 453 (557)
Q Consensus 392 i~~~~i~y~~G~Dk~GRPVvvv~~~~~~~~~----~d~e~ll~yvi~~Ld~~~--------------~~~y~iV~d~t~~ 453 (557)
+.+....|..|+|++||||++++.+++++.. .+.++++.+++..+|.++ .+..++|+|++|+
T Consensus 115 ~~~~~~~~~~g~Dk~GRpV~i~r~g~~d~~~l~~~~~~~~~lr~lv~~~E~~~~~~l~~~s~~~G~~ve~~~~IiD~~g~ 194 (320)
T 3q8g_A 115 LAKMYPQYYHHVDKDGRPLYFAELGGINLKKMYKITTEKQMLRNLVKEYELFATYRVPACSRRAGYLIETSCTVLDLKGI 194 (320)
T ss_dssp HHTTSCEEEEEECTTCCEEEEEECTTCCHHHHHHHCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTSCCCCEEEEEECTTC
T ss_pred HHHhCCceecCCCCCcCEEEEEeccccCHHHhhccCCHHHHHHHHHHHHHHHHHHhhhHHHHhcCCCcceeEEEEECCCC
Confidence 4455667788999999999999998876543 367777777776655432 2457999999999
Q ss_pred CcCCCCc-HHHHHHHHHHHhHHHhccccEEEEECCChhHHHHHHhhccccCCc---eEEEeCC--hhHHhhcCCCCCCC
Q 008682 454 SLQLQPD-LGWMRRLQQVLGRKHQRNLHAIYVLHPTFHLKATIFTLQLLVDNV---KVVYVDR--LLQLFRYVPREQLT 526 (557)
Q Consensus 454 s~~n~p~-~~~Lk~~~~~l~~~y~knLk~iyIvhps~~~k~~~~~l~pfis~k---KI~~v~s--l~eL~~~I~~~qL~ 526 (557)
+..+.+. +.+++++..+++.+|+++|+.+||||++|+|+++|++++||++++ ||+++.+ .++|.++|++++|+
T Consensus 195 sl~~~~~~~~~~k~~~~~lq~~YPerl~~i~iiN~P~~f~~~~~~ikpfl~~~t~~KI~~~~~~~~~~L~~~i~~~~LP 273 (320)
T 3q8g_A 195 SLSNAYHVLSYIKDVADISQNYYPERMGKFYIIHSPFGFSTMFKMVKPFLDPVTVSKIFILGSSYKKELLKQIPIENLP 273 (320)
T ss_dssp CHHHHHHTHHHHHHHHHHHHHHSTTCEEEEEEESCCTTHHHHHTTTGGGSCHHHHHTEEECCTTHHHHHHHHSCGGGSB
T ss_pred CHHHHHHHHHHHHHHHHHHHhhCchhhceEEEECCCHHHHHHHHHHHHhCCHHHhhhEEEeCCCcHHHHHhhCChhhCC
Confidence 8765433 678999999999999999999999999999999999999999998 9999965 68999999998763
No 30
>3sig_A PArg, poly(ADP-ribose) glycohydrolase; HET: AR6; 1.28A {Thermomonospora curvata} PDB: 3sih_A 3sii_A* 3sij_A
Probab=98.72 E-value=2.9e-08 Score=99.53 Aligned_cols=167 Identities=10% Similarity=0.045 Sum_probs=111.5
Q ss_pred CCEEEEEEcCccce---------ecCEEEEcCCcCCCCCC---ch----HHHHHhhC--hhHH--HHHHH-----hCCCC
Q 008682 82 NSKIYLWRGNPWNL---------EVDTVVNSTNENLDEAH---SS----PGLHAAAG--PGLA--EECAT-----LGGCR 136 (557)
Q Consensus 82 n~~I~i~~GDIt~~---------~vDaIVNsaN~~l~~~~---g~----~aI~~aaG--~~l~--~e~~~-----~~~~~ 136 (557)
..+|.|+.+|-... .-=++.|.||..--.|| |+ .+|.+... +.|. .+.-. ..++.
T Consensus 64 ~t~i~V~~~dtl~aA~~L~~~~~~~v~vLNfAs~~~PGGG~~~Ga~AQEE~Lcr~S~Ly~sL~~~~~~Y~~~~~~~~~~~ 143 (277)
T 3sig_A 64 PTRIEVTEETTLAAARRLTGAAGDQVACLNFASAEHPGGGFLSGAHAQEEGLARSSGLYASLRAVPQFYAFHHRQRDPLY 143 (277)
T ss_dssp -CEEEEESCCHHHHHHHHHHHCSSCCEEEEECCSSSTTTTGGGTCCSHHHHHHHHBSHHHHHTTCHHHHHHHHHHCCTTC
T ss_pred CceEEEEeCCHHHHHHHHHHhcCCCeEEEecccccCCCCCcccCcchHHHHHHHhhhHHHHHhhhhhhhccccccCCCCC
Confidence 36899999986542 22378999988665444 22 24444432 1111 11111 12344
Q ss_pred CCCEEEccc--------CCC-C---CCeEEEEcCCCCCCc----chhhHHHHHHHHHHHHHHHHHHcCCeeeeecccccC
Q 008682 137 TGMAKVTNA--------YDL-P---ARRVIHTVGPKYAVK----YHTAAENALSHCYRSCLELLIENGLKSIAMGCIYTE 200 (557)
Q Consensus 137 ~G~~~vT~~--------~~L-~---~k~IIH~VgP~~~~~----~~~~~~~~L~~~y~~~L~~a~e~~~~SIAfP~I~tG 200 (557)
+..++.++. +.| . .--||.++.|++..- ...+..+.|...++.+|.+|.++|+++|++|++|||
T Consensus 144 ~~~~IySP~V~vfR~~~~~ll~~p~~v~vit~aApn~~~~~~~~~~~~~~~~l~~rir~vL~iA~~~g~~~LVLGA~GCG 223 (277)
T 3sig_A 144 SDHLIYSPGVPVFRDDAGRLLEEPYRVAFLTSPAPNRRAIGDLRTVEEIGRVLRGRAAKVLAAARHHGHRRLVLGAWGCG 223 (277)
T ss_dssp CSCEEEEEEEEEEECTTSCEEEEEEEEEEEEECCCCHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCTTSS
T ss_pred CCCeEECCCcEEEeCCCCccccCCceeEEEEecCCCCccccCccchHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcccC
Confidence 444444432 221 1 113889999977421 123346789999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHcCCCccEEEEEecCh----hhHHHHHHHcc
Q 008682 201 AKNYPREPAAHVAIRTVRRFLEKQKDKISAVVFCTTTA----SDTEIYKRLLP 249 (557)
Q Consensus 201 ~~g~p~~~~A~i~l~ai~~fl~~~~~~i~~V~~v~~~~----~~~~~y~~~l~ 249 (557)
.||+|++++|+++.+.+.+.- .....+++|+|+++++ ..+++|++.+.
T Consensus 224 vfgnpp~~VA~~~~~vL~~~~-~f~~~f~~VvFAv~d~~~~~~n~~~F~~~F~ 275 (277)
T 3sig_A 224 VFGNDPAQVAETFAGLLLDGG-PFAGRFAHVVFAVWDTAPGAPRHAAFARRFG 275 (277)
T ss_dssp TTCCCHHHHHHHHHHHHSTTC-TTTTTCSEEEEECCCCSTTCHHHHHHHHHC-
T ss_pred cCCCCHHHHHHHHHHHHhhcc-hhcCCceEEEEEEecCCCcchHHHHHHHHHh
Confidence 999999999999999987411 1224789999999986 57888888764
No 31
>3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV}
Probab=51.80 E-value=2.3e+02 Score=30.16 Aligned_cols=109 Identities=15% Similarity=0.097 Sum_probs=70.2
Q ss_pred CEEEEEEcCccceecCEEEEcCCcCCCCCCchHHHHHhhChhHHHHHHHhC-CCCCCCEEEccc-CCCCCCeEEEEcCCC
Q 008682 83 SKIYLWRGNPWNLEVDTVVNSTNENLDEAHSSPGLHAAAGPGLAEECATLG-GCRTGMAKVTNA-YDLPARRVIHTVGPK 160 (557)
Q Consensus 83 ~~I~i~~GDIt~~~vDaIVNsaN~~l~~~~g~~aI~~aaG~~l~~e~~~~~-~~~~G~~~vT~~-~~L~~k~IIH~VgP~ 160 (557)
.++.+..++..+.+.|++|-..-+.-...+....+-++.+..|.+-++..+ .-+.|+..+..+ ..++++.|+-+-.-.
T Consensus 3 M~~~~~~~~~~~~~~d~lvv~v~~~~~l~~~~~~ld~~~~g~l~~~~~~~~f~gk~G~~~~l~~~~~~~~~~v~lvGlG~ 82 (490)
T 3jru_B 3 LQFTLNQDAPASAAVDCIVVGAFADKTLSPAAQALDSASQGRLTALLARGDVAGKTGSTTLLHDLPGVAAPRVLVVGLGD 82 (490)
T ss_dssp CEEEEECCCTTTCCSSEEEEEECTTSCBCHHHHHHHHHTTSHHHHHHHHTCSCCSTTCEEEEECCTTCSSSEEEEEECCC
T ss_pred eEEEEEcCCcccccCCEEEEEEeCCCccchhHHHHhHHHHHHHHHHHHhCCCCCCCCCEEEEccCCCCCccEEEEEecCC
Confidence 478888999999999999998755432222345677777777777666543 446788776654 445667766543211
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHHHcCCeeeeec
Q 008682 161 YAVKYHTAAENALSHCYRSCLELLIENGLKSIAMG 195 (557)
Q Consensus 161 ~~~~~~~~~~~~L~~~y~~~L~~a~e~~~~SIAfP 195 (557)
- ... ....++.+...+.+.+.+.+.+++++-
T Consensus 83 ~-~~~---~~~~~r~a~~~~~~~l~~~~~~~~~~~ 113 (490)
T 3jru_B 83 A-GKF---GVAPYLKAIGDATRALKTGAVGTALLT 113 (490)
T ss_dssp G-GGC---SHHHHHHHHHHHHHHHSSSSCSEEEEC
T ss_pred c-ccC---CHHHHHHHHHHHHHHHhhCCCceEEEE
Confidence 1 111 235677777777777777788886554
No 32
>2q3l_A Uncharacterized protein; SPOIIAA-like fold, structural genomics, joint center for STR genomics, JCSG, protein structure initiative; HET: MSE; 2.25A {Shewanella loihica pv-4} SCOP: c.13.2.2
Probab=47.62 E-value=1.1e+02 Score=26.03 Aligned_cols=89 Identities=8% Similarity=-0.002 Sum_probs=59.4
Q ss_pred CCCHHHHHHHHHHHcccccCCCEEEEEEcCCCCcCCCCcHHHHHHHHHHHhHHHhccccEEEEECCChhHHHHHHhhccc
Q 008682 422 CLDLERFVLYVVKEFEPLIQKPYSIVYFHSAASLQLQPDLGWMRRLQQVLGRKHQRNLHAIYVLHPTFHLKATIFTLQLL 501 (557)
Q Consensus 422 ~~d~e~ll~yvi~~Ld~~~~~~y~iV~d~t~~s~~n~p~~~~Lk~~~~~l~~~y~knLk~iyIvhps~~~k~~~~~l~pf 501 (557)
.-|++.++..+-..++......+.++++.+.+..-. .-.+...+ .+...+.+.+.++-||--+-|.+.+.++..+|
T Consensus 32 ~~d~~~l~~~l~~~l~~~~~~~i~ll~~~~~f~G~~--~~a~~~d~--k~~~~h~~~~~RiAvV~d~~W~~~~~~~~~~~ 107 (126)
T 2q3l_A 32 HEDYEQMTPLLESALAGIKTPEIVALIDITELDGLS--LHAAWDDL--KLGLKHGKEFKRVAIIGQGELQEWATRVANWF 107 (126)
T ss_dssp HHHHHHHHHHHHHHTTTCCSSCEEEEEEEEEEEEEC--HHHHHHHH--HHHHHHGGGEEEEEEECCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEEEEEecCCCCCC--HHHHHHHH--HhhhhHHhcCCEEEEEcChHHHHHHHHHHhhc
Confidence 346777666666666655454588888877663211 12222222 13457779999999999999999999999999
Q ss_pred cCCceEEEeCChhH
Q 008682 502 VDNVKVVYVDRLLQ 515 (557)
Q Consensus 502 is~kKI~~v~sl~e 515 (557)
++. .|+|.+..++
T Consensus 108 ~~~-evk~F~~~~~ 120 (126)
T 2q3l_A 108 TPG-EFKFFEDKRD 120 (126)
T ss_dssp CSS-EEEEESCHHH
T ss_pred cCC-ceeccCCHHH
Confidence 776 4555555544
No 33
>3h8g_F Cytosol aminopeptidase; hydrolase, manganese, metal-binding, proteas; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A*
Probab=41.14 E-value=2.2e+02 Score=30.48 Aligned_cols=107 Identities=12% Similarity=0.075 Sum_probs=70.0
Q ss_pred EEEEEEcCccceecCEEEEcCCcCCCCCCchHHHHHhhChhHHHHHHHhC-CCCCCCEEEccc-CCCCCCeEEEEc-CCC
Q 008682 84 KIYLWRGNPWNLEVDTVVNSTNENLDEAHSSPGLHAAAGPGLAEECATLG-GCRTGMAKVTNA-YDLPARRVIHTV-GPK 160 (557)
Q Consensus 84 ~I~i~~GDIt~~~vDaIVNsaN~~l~~~~g~~aI~~aaG~~l~~e~~~~~-~~~~G~~~vT~~-~~L~~k~IIH~V-gP~ 160 (557)
++.+..+++.+++.|++|-..-+.-........+-++.+..|.+-++..+ .-+.|++.+... ..++++.|+-+- |..
T Consensus 2 ~~~~~~~~~~~~~~d~lvv~v~~~~~l~~~~~~ld~~~~g~l~~~~~~~~f~gk~G~~~~l~~~~~~~~~rv~lvGlG~~ 81 (497)
T 3h8g_F 2 ELVVKSVAAASVKTATLVIPVGENRKLGAVAKAVDLASEGAISAVLKRGDLAGKPGQTLLLQNLQGLKAERVLLVGSGKD 81 (497)
T ss_dssp EEEEECSCGGGCCBSCEEEEEEGGGCCCHHHHHHHHHTTTHHHHHHHTCCCCCCTTCEEEECCCTTCSBSCEEEEEEESS
T ss_pred EEEEEcCChhhccCCEEEEEEecCCccchHHHHHhHHHHHHHHHHHHhCCCCCCCCCEEEEcCCCCCCccEEEEEECCCc
Confidence 57788899999999999987755432222345676777777776665533 445788877654 345666665442 321
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHHHcCCeeeeec
Q 008682 161 YAVKYHTAAENALSHCYRSCLELLIENGLKSIAMG 195 (557)
Q Consensus 161 ~~~~~~~~~~~~L~~~y~~~L~~a~e~~~~SIAfP 195 (557)
.. .....++.+...+.+.+.+.+.+++++-
T Consensus 82 --~~---~~~~~~r~a~~~~~~~l~~~~~~~~~~~ 111 (497)
T 3h8g_F 82 --EA---LGDRTWRKLVASVAGVLKGLNGADAVLA 111 (497)
T ss_dssp --SC---BCHHHHHHHHHHHHHHHHHSCCSEEEEC
T ss_pred --cc---CCHHHHHHHHHHHHHHHhhCCCceEEEe
Confidence 11 1235688888888888888898876654
No 34
>1c76_A Staphylokinase, SAK; beta-grAsp family, hydrolase; 2.25A {Staphylococcus aureus} SCOP: d.15.5.1 PDB: 1c77_A 1c78_A 1c79_A 1ssn_A
Probab=33.74 E-value=94 Score=26.95 Aligned_cols=55 Identities=22% Similarity=0.228 Sum_probs=42.0
Q ss_pred EecccCCCCCeEE---EEEeeeccCCCCCHHHHHHHHHHHcccccCCCEEEEEEcCCC
Q 008682 399 YRGGVDSEGRPVM---VVVGAHFLLRCLDLERFVLYVVKEFEPLIQKPYSIVYFHSAA 453 (557)
Q Consensus 399 y~~G~Dk~GRPVv---vv~~~~~~~~~~d~e~ll~yvi~~Ld~~~~~~y~iV~d~t~~ 453 (557)
-+.|+|..|.-|+ |+-.+.-+-+.++-+.++.|+-..++..+.++|.+|=++.++
T Consensus 28 NVTGvD~~G~~ilsP~Y~e~~Lk~G~tltKeeil~~VQ~~idas~~~~f~vV~~~e~a 85 (136)
T 1c76_A 28 NVTGVDGKGNELLSPHYVEFPIKPGTTLTKEKIEYYVEWALDATAYKEFRVVELDPSA 85 (136)
T ss_dssp EEEEECTTCCEEECCCCEEEECCTTCEECHHHHHHHHHHHHTTSTTTTEEEEEECTTC
T ss_pred EEeeecCCCCEEeccccEEEecCcCceecHHHHHHHHHHHhhhhhcCceEEEecCCCc
Confidence 3459999999887 332222222468999999999999999999999988876654
No 35
>2vg0_A Short-chain Z-isoprenyl diphosphate synthetase; peptidoglycan synthesis, cell WALL biogenesis/degradation, secreted, cell shape; HET: GPP; 1.7A {Mycobacterium tuberculosis} PDB: 2vfw_A* 2vg1_A*
Probab=33.55 E-value=57 Score=31.20 Aligned_cols=51 Identities=14% Similarity=0.082 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHHHHHH
Q 008682 172 ALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEK 223 (557)
Q Consensus 172 ~L~~~y~~~L~~a~e~~~~SIAfP~I~tG~~g~p~~~~A~i~l~ai~~fl~~ 223 (557)
.=...+++++..|.+.|++.+.+=+.||+++.=|.+++ ..+++-+.+++..
T Consensus 31 ~G~~~l~~i~~~c~~~GI~~lTlYaFSteN~kRp~~Ev-~~Lm~l~~~~l~~ 81 (227)
T 2vg0_A 31 MGAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDEL-AALIEIITDVVEE 81 (227)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEEEEEEETGGGGSCHHHH-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEEeecccccCCCHHHH-HHHHHHHHHHHHH
Confidence 34577888888999999999999999999999999988 5666777777776
No 36
>3k0t_A Endoribonuclease L-PSP, putative; glucose binding, ER stressor, sugar binding protein; HET: BGC; 2.10A {Pseudomonas syringae PV}
Probab=22.78 E-value=2e+02 Score=25.13 Aligned_cols=49 Identities=10% Similarity=0.131 Sum_probs=34.1
Q ss_pred ChHHHHHHHHHHHHHHHHHcCC---CccEEEEEecChhhHHHHHHHccccCC
Q 008682 205 PREPAAHVAIRTVRRFLEKQKD---KISAVVFCTTTASDTEIYKRLLPLYFP 253 (557)
Q Consensus 205 p~~~~A~i~l~ai~~fl~~~~~---~i~~V~~v~~~~~~~~~y~~~l~~yfp 253 (557)
....-++.+++.+..-|+.... .+-++.+.+.+..++..+.+....||+
T Consensus 63 d~~~Qt~~~l~ni~aiL~~aG~~l~~Vvk~tvyl~d~~df~~~n~v~~~~f~ 114 (143)
T 3k0t_A 63 GIEAQITQVFENLKSVAQAAGGSFKDIVKLNIFLTDLGHFAKVNEIMGSYFS 114 (143)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHTTTCC
T ss_pred CHHHHHHHHHHHHHHHHHHhCCChHHEEEEEEEEcChHHHHHHHHHHHHHcC
Confidence 4455566666677777766543 344555556777889999999999997
No 37
>3l7q_A Putative translation initiation inhibitor, ALDR R like protein; translation initiation inhibitor regulator-like; 2.50A {Streptococcus mutans} SCOP: d.79.1.0
Probab=22.64 E-value=2e+02 Score=24.19 Aligned_cols=50 Identities=8% Similarity=0.161 Sum_probs=33.5
Q ss_pred ChHHHHHHHHHHHHHHHHHcCC---CccEEEEEecChhhHHHHHHHccccCCC
Q 008682 205 PREPAAHVAIRTVRRFLEKQKD---KISAVVFCTTTASDTEIYKRLLPLYFPR 254 (557)
Q Consensus 205 p~~~~A~i~l~ai~~fl~~~~~---~i~~V~~v~~~~~~~~~y~~~l~~yfpr 254 (557)
....-++.+++.+..-|+.... ++-++.+.+.+..++..+.+....||+.
T Consensus 45 d~~~Q~~~~l~ni~~~L~~ag~~~~~vvk~~vyl~d~~~~~~~n~v~~~~f~~ 97 (125)
T 3l7q_A 45 TIEEQTQQVLKNISAILTEAGTDFDHVVKTTCFLSDIDDFVPFNEVYATAFKS 97 (125)
T ss_dssp SHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEESCGGGHHHHHHHHHTTCCS
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEEcCHHHHHHHHHHHHHHcCC
Confidence 3455556666666666666542 3445555567778899999998999974
No 38
>3ugs_B Undecaprenyl pyrophosphate synthase; niaid, csgid, structural genomics, center for structural GEN infectious diseases; HET: FFT; 2.46A {Campylobacter jejuni} SCOP: c.101.1.0
Probab=21.74 E-value=2.5e+02 Score=26.72 Aligned_cols=49 Identities=14% Similarity=0.322 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHHHHHH
Q 008682 174 SHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEK 223 (557)
Q Consensus 174 ~~~y~~~L~~a~e~~~~SIAfP~I~tG~~g~p~~~~A~i~l~ai~~fl~~ 223 (557)
...++++++.|.+.|++.+.+=++||.++.=|++++... ++-+++++.+
T Consensus 36 ~~~~~~i~~~c~~lGI~~lTlYaFStENw~Rp~~EV~~L-m~L~~~~l~~ 84 (225)
T 3ugs_B 36 VKTMQKLMEVCMEENISNLSLFAFSTENWKRPKDEIDFI-FELLDRCLDE 84 (225)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEEESGGGGSCHHHHHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEEcccccCCCHHHHHHH-HHHHHHHHHH
Confidence 356677888888999999999999999999999887654 3444555544
No 39
>2sak_A Staphylokinase; plasminogen activation, fibrinolysis, hydrolase, plasminogen activator; 1.80A {Staphylococcus aureus} SCOP: d.15.5.1 PDB: 1bui_C*
Probab=21.37 E-value=2.2e+02 Score=24.37 Aligned_cols=56 Identities=25% Similarity=0.350 Sum_probs=44.4
Q ss_pred eEecccCCCCCeEEEEEeeeccC---CCCCHHHHHHHHHHHcccccCCCEEEEEEcCCC
Q 008682 398 VYRGGVDSEGRPVMVVVGAHFLL---RCLDLERFVLYVVKEFEPLIQKPYSIVYFHSAA 453 (557)
Q Consensus 398 ~y~~G~Dk~GRPVvvv~~~~~~~---~~~d~e~ll~yvi~~Ld~~~~~~y~iV~d~t~~ 453 (557)
+-+.|+|++|.-++..-.--|+. ..++-+.++.++-..++.....+|-+|=++..+
T Consensus 12 INvtGvd~~g~~~~~p~y~d~~l~~g~~~tK~elL~~Vq~~idas~~~qf~vVdf~e~A 70 (121)
T 2sak_A 12 VNVTGVDSKGNELLSPHYVEFPIKPGTTLTKEKIEYYVEWALDATAYKEFRVVELDPSA 70 (121)
T ss_dssp EEEEEECTTCCEEEEEEEEEEECCTTCEECHHHHHHHHHHHHTTSTTTTCEEEEECTTC
T ss_pred EEEEeEeCCCCEEEeeeeEEEEcccCcEecHHHHHHHHHHHhhhhhccceEEEecCccc
Confidence 34569999999999775444443 357899999999999998888899888887765
Done!