BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008686
(557 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2AC1|A Chain A, Crystal Structure Of A Cell-Wall Invertase From
Arabidopsis Thaliana
Length = 541
Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/542 (59%), Positives = 408/542 (75%), Gaps = 26/542 (4%)
Query: 41 SSITSQPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDM 96
S +QPYRTG+HFQPP +WMNDPNGPMIYKGIYH FYQ+ +W +VW HSTSTD+
Sbjct: 1 SPSVNQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDL 60
Query: 97 VNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDP 156
+NW PH AI+PS PFD N CWSGS TILP G P +LYTGID N+QVQN+A PKNLSDP
Sbjct: 61 INWDPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDP 120
Query: 157 YLKEWIKPPENPLMVP--ADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRS 214
YL+EW K P NPLM P + I+ SFRDPTTAW+G DK WRVIIGSKI+ GLAI Y S
Sbjct: 121 YLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTS 180
Query: 215 KDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIG-PN--IKHVLKVSLSN 271
KDF+ W K+ + L+ + SGMWECPDFFPV+ GV+TS G PN +KHVLK+SL +
Sbjct: 181 KDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDD 240
Query: 272 YQQDYYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGKFYGSKTFFDSAKNRRILWGWINE 331
+ DYYTIGTY+ D ++ + G D + RYDYGK+Y SKTFFDSAKNRRILWGW NE
Sbjct: 241 TKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNE 300
Query: 332 SSTRSDNLKKGWAGLQATPRNLWLDKSGRQLMQWPISEIEKLRGNQVK-WPAKLLERGSM 390
SS+ D+++KGW+G+Q PR +WLD+SG+QL+QWP+ E+E+LR QVK K+L+ GS
Sbjct: 301 SSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSR 360
Query: 391 VGITGITAAQADVEISFQTTAFEKAEVLDSIWTNPQFLC------------PFGLLVLAS 438
+ + G+TAAQADVE+ F+ EKA+V++ WT+PQ +C PFGL+VLAS
Sbjct: 361 LEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLAS 420
Query: 439 NGLQEYTAVFFRIFKGQ---DRHIVLMCSDQSRSSINDDNDKTSYGAFLDLDPVHEKLSI 495
L+EYT+V+FRIFK + ++++VLMCSDQSRSS+ +DNDKT+YGAF+D++P H+ LS+
Sbjct: 421 KNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINP-HQPLSL 479
Query: 496 RSLIDRSIVESFGGGGKACITARIYPTLAIHDKAHLYAFNNGTEKVNITSLRAWSMKKAQ 555
R+LID S+VESFGG G+ACIT+R+YP LAI +HL+AFN G + V++ +L AWSM AQ
Sbjct: 480 RALIDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQ 539
Query: 556 IN 557
I+
Sbjct: 540 IS 541
>pdb|2XQR|A Chain A, Crystal Structure Of Plant Cell Wall Invertase In Complex
With A Specific Protein Inhibitor
pdb|2XQR|C Chain C, Crystal Structure Of Plant Cell Wall Invertase In Complex
With A Specific Protein Inhibitor
pdb|2XQR|E Chain E, Crystal Structure Of Plant Cell Wall Invertase In Complex
With A Specific Protein Inhibitor
pdb|2XQR|G Chain G, Crystal Structure Of Plant Cell Wall Invertase In Complex
With A Specific Protein Inhibitor
pdb|2XQR|I Chain I, Crystal Structure Of Plant Cell Wall Invertase In Complex
With A Specific Protein Inhibitor
pdb|2XQR|K Chain K, Crystal Structure Of Plant Cell Wall Invertase In Complex
With A Specific Protein Inhibitor
Length = 537
Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/538 (59%), Positives = 407/538 (75%), Gaps = 26/538 (4%)
Query: 45 SQPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWT 100
+QPYRTG+HFQPP +WMNDPNGPMIYKGIYH FYQ+ +W +VW HSTSTD++NW
Sbjct: 1 NQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWD 60
Query: 101 PHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKE 160
PH AI+PS PFD N CWSGS TILP G P +LYTGID N+QVQN+A PKNLSDPYL+E
Sbjct: 61 PHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLRE 120
Query: 161 WIKPPENPLMVP--ADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFV 218
W K P NPLM P + I+ SFRDPTTAW+G DK WRVIIGSKI+ GLAI Y SKDF+
Sbjct: 121 WKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFL 180
Query: 219 NWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIG-PN--IKHVLKVSLSNYQQD 275
W K+ + L+ + SGMWECPDFFPV+ GV+TS G PN +KHVLK+SL + + D
Sbjct: 181 KWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHD 240
Query: 276 YYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGKFYGSKTFFDSAKNRRILWGWINESSTR 335
YYTIGTY+ D ++ + G D + RYDYGK+Y SKTFFDSAKNRRILWGW NESS+
Sbjct: 241 YYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSV 300
Query: 336 SDNLKKGWAGLQATPRNLWLDKSGRQLMQWPISEIEKLRGNQVK-WPAKLLERGSMVGIT 394
D+++KGW+G+Q PR +WLD+SG+QL+QWP+ E+E+LR QVK K+L+ GS + +
Sbjct: 301 EDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVY 360
Query: 395 GITAAQADVEISFQTTAFEKAEVLDSIWTNPQFLC------------PFGLLVLASNGLQ 442
G+TAAQADVE+ F+ EKA+V++ WT+PQ +C PFGL+VLAS L+
Sbjct: 361 GVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLASKNLE 420
Query: 443 EYTAVFFRIFKGQ---DRHIVLMCSDQSRSSINDDNDKTSYGAFLDLDPVHEKLSIRSLI 499
EYT+V+FRIFK + ++++VLMCSDQSRSS+ +DNDKT+YGAF+D++P H+ LS+R+LI
Sbjct: 421 EYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINP-HQPLSLRALI 479
Query: 500 DRSIVESFGGGGKACITARIYPTLAIHDKAHLYAFNNGTEKVNITSLRAWSMKKAQIN 557
D S+VESFGG G+ACIT+R+YP LAI +HL+AFN G + V++ +L AWSM AQI+
Sbjct: 480 DHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQIS 537
>pdb|2QQU|A Chain A, Crystal Structure Of A Cell-Wall Invertase (D239a) From
Arabidopsis Thaliana In Complex With Sucrose
Length = 535
Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/536 (59%), Positives = 406/536 (75%), Gaps = 26/536 (4%)
Query: 45 SQPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWT 100
+QPYRTG+HFQPP +WMNDPNGPMIYKGIYH FYQ+ +W +VW HSTSTD++NW
Sbjct: 1 NQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWD 60
Query: 101 PHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKE 160
PH AI+PS PFD N CWSGS TILP G P +LYTGID N+QVQN+A PKNLSDPYL+E
Sbjct: 61 PHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLRE 120
Query: 161 WIKPPENPLMVP--ADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFV 218
W K P NPLM P + I+ SFRDPTTAW+G DK WRVIIGSKI+ GLAI Y SKDF+
Sbjct: 121 WKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFL 180
Query: 219 NWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIG-PN--IKHVLKVSLSNYQQD 275
W K+ + L+ + SGMWECPDFFPV+ GV+TS G PN +KHVLK+SL++ + D
Sbjct: 181 KWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLADTKHD 240
Query: 276 YYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGKFYGSKTFFDSAKNRRILWGWINESSTR 335
YYTIGTY+ D ++ + G D + RYDYGK+Y SKTFFDSAKNRRILWGW NESS+
Sbjct: 241 YYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSV 300
Query: 336 SDNLKKGWAGLQATPRNLWLDKSGRQLMQWPISEIEKLRGNQVK-WPAKLLERGSMVGIT 394
D+++KGW+G+Q PR +WLD+SG+QL+QWP+ E+E+LR QVK K+L+ GS + +
Sbjct: 301 EDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVY 360
Query: 395 GITAAQADVEISFQTTAFEKAEVLDSIWTNPQFLC------------PFGLLVLASNGLQ 442
G+TAAQADVE+ F+ EKA+V++ WT+PQ +C PFGL+VLAS L+
Sbjct: 361 GVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLASKNLE 420
Query: 443 EYTAVFFRIFKGQ---DRHIVLMCSDQSRSSINDDNDKTSYGAFLDLDPVHEKLSIRSLI 499
EYT+V+FRIFK + ++++VLMCSDQSRSS+ +DNDKT+YGAF+D++P H+ LS+R+LI
Sbjct: 421 EYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINP-HQPLSLRALI 479
Query: 500 DRSIVESFGGGGKACITARIYPTLAIHDKAHLYAFNNGTEKVNITSLRAWSMKKAQ 555
D S+VESFGG G+ACIT+R+YP LAI +HL+AFN G + V++ +L AWSM AQ
Sbjct: 480 DHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQ 535
>pdb|2OXB|A Chain A, Crystal Structure Of A Cell-Wall Invertase (E203q) From
Arabidopsis Thaliana In Complex With Sucrose
Length = 537
Score = 669 bits (1725), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/538 (59%), Positives = 407/538 (75%), Gaps = 26/538 (4%)
Query: 45 SQPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWT 100
+QPYRTG+HFQPP +WMNDPNGPMIYKGIYH FYQ+ +W +VW HSTSTD++NW
Sbjct: 1 NQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWD 60
Query: 101 PHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKE 160
PH AI+PS PFD N CWSGS TILP G P +LYTGID N+QVQN+A PKNLSDPYL+E
Sbjct: 61 PHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLRE 120
Query: 161 WIKPPENPLMVP--ADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFV 218
W K P NPLM P + I+ SFRDPTTAW+G DK WRVIIGSKI+ GLAI Y SKDF+
Sbjct: 121 WKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFL 180
Query: 219 NWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIG-PN--IKHVLKVSLSNYQQD 275
W K+ + L+ + SGMW+CPDFFPV+ GV+TS G PN +KHVLK+SL + + D
Sbjct: 181 KWEKSPEPLHYDDGSGMWQCPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHD 240
Query: 276 YYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGKFYGSKTFFDSAKNRRILWGWINESSTR 335
YYTIGTY+ D ++ + G D + RYDYGK+Y SKTFFDSAKNRRILWGW NESS+
Sbjct: 241 YYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSV 300
Query: 336 SDNLKKGWAGLQATPRNLWLDKSGRQLMQWPISEIEKLRGNQVK-WPAKLLERGSMVGIT 394
D+++KGW+G+Q PR +WLD+SG+QL+QWP+ E+E+LR QVK K+L+ GS + +
Sbjct: 301 EDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVY 360
Query: 395 GITAAQADVEISFQTTAFEKAEVLDSIWTNPQFLC------------PFGLLVLASNGLQ 442
G+TAAQADVE+ F+ EKA+V++ WT+PQ +C PFGL+VLAS L+
Sbjct: 361 GVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLASKNLE 420
Query: 443 EYTAVFFRIFKGQ---DRHIVLMCSDQSRSSINDDNDKTSYGAFLDLDPVHEKLSIRSLI 499
EYT+V+FRIFK + ++++VLMCSDQSRSS+ +DNDKT+YGAF+D++P H+ LS+R+LI
Sbjct: 421 EYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINP-HQPLSLRALI 479
Query: 500 DRSIVESFGGGGKACITARIYPTLAIHDKAHLYAFNNGTEKVNITSLRAWSMKKAQIN 557
D S+VESFGG G+ACIT+R+YP LAI +HL+AFN G + V++ +L AWSM AQI+
Sbjct: 480 DHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQIS 537
>pdb|2QQW|A Chain A, Crystal Structure Of A Cell-Wall Invertase (D23a) From
Arabidopsis Thaliana In Complex With Sucrose
Length = 537
Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/538 (59%), Positives = 406/538 (75%), Gaps = 26/538 (4%)
Query: 45 SQPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWT 100
+QPYRTG+HFQPP +WMN PNGPMIYKGIYH FYQ+ +W +VW HSTSTD++NW
Sbjct: 1 NQPYRTGFHFQPPKNWMNAPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWD 60
Query: 101 PHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKE 160
PH AI+PS PFD N CWSGS TILP G P +LYTGID N+QVQN+A PKNLSDPYL+E
Sbjct: 61 PHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLRE 120
Query: 161 WIKPPENPLMVP--ADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFV 218
W K P NPLM P + I+ SFRDPTTAW+G DK WRVIIGSKI+ GLAI Y SKDF+
Sbjct: 121 WKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFL 180
Query: 219 NWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIG-PN--IKHVLKVSLSNYQQD 275
W K+ + L+ + SGMWECPDFFPV+ GV+TS G PN +KHVLK+SL + + D
Sbjct: 181 KWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHD 240
Query: 276 YYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGKFYGSKTFFDSAKNRRILWGWINESSTR 335
YYTIGTY+ D ++ + G D + RYDYGK+Y SKTFFDSAKNRRILWGW NESS+
Sbjct: 241 YYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSV 300
Query: 336 SDNLKKGWAGLQATPRNLWLDKSGRQLMQWPISEIEKLRGNQVK-WPAKLLERGSMVGIT 394
D+++KGW+G+Q PR +WLD+SG+QL+QWP+ E+E+LR QVK K+L+ GS + +
Sbjct: 301 EDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVY 360
Query: 395 GITAAQADVEISFQTTAFEKAEVLDSIWTNPQFLC------------PFGLLVLASNGLQ 442
G+TAAQADVE+ F+ EKA+V++ WT+PQ +C PFGL+VLAS L+
Sbjct: 361 GVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLASKNLE 420
Query: 443 EYTAVFFRIFKGQ---DRHIVLMCSDQSRSSINDDNDKTSYGAFLDLDPVHEKLSIRSLI 499
EYT+V+FRIFK + ++++VLMCSDQSRSS+ +DNDKT+YGAF+D++P H+ LS+R+LI
Sbjct: 421 EYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINP-HQPLSLRALI 479
Query: 500 DRSIVESFGGGGKACITARIYPTLAIHDKAHLYAFNNGTEKVNITSLRAWSMKKAQIN 557
D S+VESFGG G+ACIT+R+YP LAI +HL+AFN G + V++ +L AWSM AQI+
Sbjct: 480 DHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQIS 537
>pdb|2QQV|A Chain A, Crystal Structure Of A Cell-Wall Invertase (E203a) From
Arabidopsis Thaliana In Complex With Sucrose
Length = 537
Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/538 (59%), Positives = 406/538 (75%), Gaps = 26/538 (4%)
Query: 45 SQPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWT 100
+QPYRTG+HFQPP +WMNDPNGPMIYKGIYH FYQ+ +W +VW HSTSTD++NW
Sbjct: 1 NQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWD 60
Query: 101 PHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKE 160
PH AI+PS PFD N CWSGS TILP G P +LYTGID N+QVQN+A PKNLSDPYL+E
Sbjct: 61 PHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLRE 120
Query: 161 WIKPPENPLMVP--ADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFV 218
W K P NPLM P + I+ SFRDPTTAW+G DK WRVIIGSKI+ GLAI Y SKDF+
Sbjct: 121 WKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFL 180
Query: 219 NWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIG-PN--IKHVLKVSLSNYQQD 275
W K+ + L+ + SGMW CPDFFPV+ GV+TS G PN +KHVLK+SL + + D
Sbjct: 181 KWEKSPEPLHYDDGSGMWACPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHD 240
Query: 276 YYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGKFYGSKTFFDSAKNRRILWGWINESSTR 335
YYTIGTY+ D ++ + G D + RYDYGK+Y SKTFFDSAKNRRILWGW NESS+
Sbjct: 241 YYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSV 300
Query: 336 SDNLKKGWAGLQATPRNLWLDKSGRQLMQWPISEIEKLRGNQVK-WPAKLLERGSMVGIT 394
D+++KGW+G+Q PR +WLD+SG+QL+QWP+ E+E+LR QVK K+L+ GS + +
Sbjct: 301 EDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVY 360
Query: 395 GITAAQADVEISFQTTAFEKAEVLDSIWTNPQFLC------------PFGLLVLASNGLQ 442
G+TAAQADVE+ F+ EKA+V++ WT+PQ +C PFGL+VLAS L+
Sbjct: 361 GVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLASKNLE 420
Query: 443 EYTAVFFRIFKGQ---DRHIVLMCSDQSRSSINDDNDKTSYGAFLDLDPVHEKLSIRSLI 499
EYT+V+FRIFK + ++++VLMCSDQSRSS+ +DNDKT+YGAF+D++P H+ LS+R+LI
Sbjct: 421 EYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINP-HQPLSLRALI 479
Query: 500 DRSIVESFGGGGKACITARIYPTLAIHDKAHLYAFNNGTEKVNITSLRAWSMKKAQIN 557
D S+VESFGG G+ACIT+R+YP LAI +HL+AFN G + V++ +L AWSM AQI+
Sbjct: 480 DHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQIS 537
>pdb|1ST8|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia From
Cichorium Intybus
pdb|2ADD|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia From
Cichorium Intybus In Complex With Sucrose
pdb|2ADE|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia From
Cichorium Intybus In Complex With Fructose
pdb|2AEY|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia From
Cichorium Intybus In Complex With 2,5
Dideoxy-2,5-Immino-D-Mannitol
Length = 543
Score = 620 bits (1600), Expect = e-178, Method: Compositional matrix adjust.
Identities = 286/531 (53%), Positives = 390/531 (73%), Gaps = 22/531 (4%)
Query: 46 QPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYKLW-----DTVVWGHSTSTDMVNWT 100
QPYRTGYHFQPPS+WMNDPNGPM+Y+G+YHFFYQY + D ++WGH+ S D+VNW
Sbjct: 5 QPYRTGYHFQPPSNWMNDPNGPMLYQGVYHFFYQYNPYAATFGDVIIWGHAVSYDLVNWI 64
Query: 101 PHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKE 160
D AIYP+Q D+ SCWSGS TILPG PA+LYTG D+ ++QVQ+LA PKNLSDP+L+E
Sbjct: 65 HLDPAIYPTQEADSKSCWSGSATILPGNIPAMLYTGSDSKSRQVQDLAWPKNLSDPFLRE 124
Query: 161 WIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFVNW 220
W+K P+NPL+ P + + FRDP+TAW+GPD +WR+++G ++ G+A LY+S DFVNW
Sbjct: 125 WVKHPKNPLITPPEGVKDDCFRDPSTAWLGPDGVWRIVVGGDRDNNGMAFLYQSTDFVNW 184
Query: 221 TKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYYTIG 280
+ +Q L S + +G WECPDF+PV S G+DTSV G +++HV+K + D+YTIG
Sbjct: 185 KRYDQPLSSADATGTWECPDFYPVPLNSTNGLDTSVYGGSVRHVMKAGFEGH--DWYTIG 242
Query: 281 TYNITTDTYIAEEGSFDDNS--GLRYDYGKFYGSKTFFDSAKNRRILWGWINESSTRSDN 338
TY+ + ++ + G S LRYDYG+FY SK+FFD AKNRR+LW W+ E+ +++D+
Sbjct: 243 TYSPDRENFLPQNGLSLTGSTLDLRYDYGQFYASKSFFDDAKNRRVLWAWVPETDSQADD 302
Query: 339 LKKGWAGLQATPRNLWLDKSGRQLMQWPISEIEKLRGNQVKWPAKLLERGSMVGITGITA 398
++KGWAGLQ+ PR LW+D++G+QL+QWP+ EIE+LR NQV K L+ GS++ I GI A
Sbjct: 303 IEKGWAGLQSFPRALWIDRNGKQLIQWPVEEIEELRQNQVNLQNKNLKPGSVLEIHGIAA 362
Query: 399 AQADVEISFQTTAFEKAEVLDSIWTNPQFLC------------PFGLLVLASNGLQEYTA 446
+QADV ISF+ ++AEVLD+ +PQ LC PFGLL +AS L+E +A
Sbjct: 363 SQADVTISFKLEGLKEAEVLDTTLVDPQALCNERGASSRGALGPFGLLAMASKDLKEQSA 422
Query: 447 VFFRIFKGQ-DRHIVLMCSDQSRSSINDDNDKTSYGAFLDLDPVHEKLSIRSLIDRSIVE 505
+FFR+F+ Q R+ VLMCSD SRS++ + D TSYGAF+D+DP E++S+R+LID SI+E
Sbjct: 423 IFFRVFQNQLGRYSVLMCSDLSRSTVRSNIDTTSYGAFVDIDPRSEEISLRNLIDHSIIE 482
Query: 506 SFGGGGKACITARIYPTLAIHDKAHLYAFNNGTEKVNITSLRAWSMKKAQI 556
SFG GGK CIT+RIYP +++AHL+ FNNGT+ V I+ + AWSMK A+
Sbjct: 483 SFGAGGKTCITSRIYPKFVNNEEAHLFVFNNGTQNVKISEMSAWSMKNAKF 533
>pdb|2AEZ|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia (E201q)
From Cichorium Intybus In Complex With 1-Kestose
Length = 543
Score = 619 bits (1597), Expect = e-178, Method: Compositional matrix adjust.
Identities = 285/531 (53%), Positives = 390/531 (73%), Gaps = 22/531 (4%)
Query: 46 QPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYKLW-----DTVVWGHSTSTDMVNWT 100
QPYRTGYHFQPPS+WMNDPNGPM+Y+G+YHFFYQY + D ++WGH+ S D+VNW
Sbjct: 5 QPYRTGYHFQPPSNWMNDPNGPMLYQGVYHFFYQYNPYAATFGDVIIWGHAVSYDLVNWI 64
Query: 101 PHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKE 160
D AIYP+Q D+ SCWSGS TILPG PA+LYTG D+ ++QVQ+LA PKNLSDP+L+E
Sbjct: 65 HLDPAIYPTQEADSKSCWSGSATILPGNIPAMLYTGSDSKSRQVQDLAWPKNLSDPFLRE 124
Query: 161 WIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFVNW 220
W+K P+NPL+ P + + FRDP+TAW+GPD +WR+++G ++ G+A LY+S DFVNW
Sbjct: 125 WVKHPKNPLITPPEGVKDDCFRDPSTAWLGPDGVWRIVVGGDRDNNGMAFLYQSTDFVNW 184
Query: 221 TKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYYTIG 280
+ +Q L S + +G W+CPDF+PV S G+DTSV G +++HV+K + D+YTIG
Sbjct: 185 KRYDQPLSSADATGTWQCPDFYPVPLNSTNGLDTSVYGGSVRHVMKAGFEGH--DWYTIG 242
Query: 281 TYNITTDTYIAEEGSFDDNS--GLRYDYGKFYGSKTFFDSAKNRRILWGWINESSTRSDN 338
TY+ + ++ + G S LRYDYG+FY SK+FFD AKNRR+LW W+ E+ +++D+
Sbjct: 243 TYSPDRENFLPQNGLSLTGSTLDLRYDYGQFYASKSFFDDAKNRRVLWAWVPETDSQADD 302
Query: 339 LKKGWAGLQATPRNLWLDKSGRQLMQWPISEIEKLRGNQVKWPAKLLERGSMVGITGITA 398
++KGWAGLQ+ PR LW+D++G+QL+QWP+ EIE+LR NQV K L+ GS++ I GI A
Sbjct: 303 IEKGWAGLQSFPRALWIDRNGKQLIQWPVEEIEELRQNQVNLQNKNLKPGSVLEIHGIAA 362
Query: 399 AQADVEISFQTTAFEKAEVLDSIWTNPQFLC------------PFGLLVLASNGLQEYTA 446
+QADV ISF+ ++AEVLD+ +PQ LC PFGLL +AS L+E +A
Sbjct: 363 SQADVTISFKLEGLKEAEVLDTTLVDPQALCNERGASSRGALGPFGLLAMASKDLKEQSA 422
Query: 447 VFFRIFKGQ-DRHIVLMCSDQSRSSINDDNDKTSYGAFLDLDPVHEKLSIRSLIDRSIVE 505
+FFR+F+ Q R+ VLMCSD SRS++ + D TSYGAF+D+DP E++S+R+LID SI+E
Sbjct: 423 IFFRVFQNQLGRYSVLMCSDLSRSTVRSNIDTTSYGAFVDIDPRSEEISLRNLIDHSIIE 482
Query: 506 SFGGGGKACITARIYPTLAIHDKAHLYAFNNGTEKVNITSLRAWSMKKAQI 556
SFG GGK CIT+RIYP +++AHL+ FNNGT+ V I+ + AWSMK A+
Sbjct: 483 SFGAGGKTCITSRIYPKFVNNEEAHLFVFNNGTQNVKISEMSAWSMKNAKF 533
>pdb|3UGF|A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra
Terminalis
pdb|3UGF|B Chain B, Crystal Structure Of A 6-Sst6-Sft From Pachysandra
Terminalis
pdb|3UGG|A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra
Terminalis In Complex With 1-Kestose
pdb|3UGG|B Chain B, Crystal Structure Of A 6-Sst6-Sft From Pachysandra
Terminalis In Complex With 1-Kestose
pdb|3UGH|A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra
Terminalis In Complex With 6-Kestose
pdb|3UGH|B Chain B, Crystal Structure Of A 6-Sst6-Sft From Pachysandra
Terminalis In Complex With 6-Kestose
Length = 546
Score = 413 bits (1062), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/530 (41%), Positives = 309/530 (58%), Gaps = 27/530 (5%)
Query: 49 RTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWTPHDA 104
RT +HFQP SWM+DP+GP+ YKG YHFFYQY +W WGH+ S D+++W
Sbjct: 19 RTAFHFQPERSWMSDPDGPIFYKGWYHFFYQYNPDNPVWGNNTWGHTVSRDLIHWLYLPL 78
Query: 105 AIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKP 164
A+ Q +D +SGS T LP G +LYTG+ ++ +LA P +LSDP L EW+K
Sbjct: 79 ALAADQWYDMQGVFSGSATCLPDGRIMMLYTGVTKEMVEMLSLAYPADLSDPLLVEWVKY 138
Query: 165 PENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAE 224
P NP++ + P FRD +T W + WR+ IG+K N TG+A++Y +KDF ++ E
Sbjct: 139 PGNPILSAPPGVSPTEFRDASTGWYVSNGTWRIAIGAKYNTTGIAMVYETKDFKSFKLLE 198
Query: 225 QSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYYTIGTYNI 284
+ L++ +G+WEC D +PVST KG++TSV GP +KHVLK S+ Q+DYY IGTY++
Sbjct: 199 ELLHAVPDTGLWECVDLYPVSTTGEKGLETSVNGPKVKHVLKASIDEQQRDYYAIGTYDL 258
Query: 285 TTDTYIAEEGSFDDNSGLRYDYGKFYGSKTFFDSAKNRRILWGWINESSTRSDNLKKGWA 344
T+ + + D GLRYD+GK+Y SKTF+D K RR++W W E + + +KGWA
Sbjct: 259 GTNKWTPDNPEEDVGIGLRYDWGKYYASKTFYDPKKQRRVVWAWTKELDSEVADREKGWA 318
Query: 345 GLQATPRNLWLD-KSGRQLMQWPISEIEKLRGNQVKWPAKLLERGSMVGITGITAAQADV 403
+Q PR + LD K+G ++ WP+ E+E LR + ++ GS+V + TA Q D+
Sbjct: 319 NVQTIPRTVLLDQKTGTNVLLWPVEEVESLRLSSKEFSKVKAGAGSVVPLDVGTATQLDI 378
Query: 404 EISFQTTAFEKAEVLDSIWTNPQFLC-------------PFGLLVLASNGLQEYTAVFFR 450
F+ +K + +I + + C PFGLLV A+ L E T V+F
Sbjct: 379 IAEFE---IDKEALEGTIEADMGYNCTTSGGAAERGVLGPFGLLVSATENLSEQTPVYFY 435
Query: 451 IFKGQDRHI-VLMCSDQSRSSINDDNDKTSYGAFLDLDPV--HEKLSIRSLIDRSIVESF 507
I KG D + C D+SRSS D K G + PV EK ++R L+D SIVESF
Sbjct: 436 IAKGTDGNFKTFFCLDESRSSKASDVSKQVKGFTV---PVLDGEKFTMRLLVDHSIVESF 492
Query: 508 GGGGKACITARIYPTLAIHDKAHLYAFNNGTEKVNITSLRAWSMKKAQIN 557
GG++CIT+R+YPT AI+ A L+ FNN T SL+ W M A I
Sbjct: 493 AQGGRSCITSRVYPTEAIYGAAKLFLFNNATGASITASLKIWEMNSAFIQ 542
>pdb|1UYP|A Chain A, The Three-Dimensional Structure Of Beta-Fructosidase
(Invertase) From Thermotoga Maritima
pdb|1UYP|B Chain B, The Three-Dimensional Structure Of Beta-Fructosidase
(Invertase) From Thermotoga Maritima
pdb|1UYP|C Chain C, The Three-Dimensional Structure Of Beta-Fructosidase
(Invertase) From Thermotoga Maritima
pdb|1UYP|D Chain D, The Three-Dimensional Structure Of Beta-Fructosidase
(Invertase) From Thermotoga Maritima
pdb|1UYP|E Chain E, The Three-Dimensional Structure Of Beta-Fructosidase
(Invertase) From Thermotoga Maritima
pdb|1UYP|F Chain F, The Three-Dimensional Structure Of Beta-Fructosidase
(Invertase) From Thermotoga Maritima
Length = 432
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 166/350 (47%), Gaps = 54/350 (15%)
Query: 48 YRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWTPHD 103
++ YHF P + WMNDPNG + +KG YH FYQY W + WGH+ S D+V+W
Sbjct: 2 FKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLP 61
Query: 104 AAIYPSQPFDANSCWSGSVTILPGGNPAVLYT-----GIDAGNKQVQNLAVPKNLSDPYL 158
A+YP + + +SGS + G ++YT + G K+ Q + + +N D
Sbjct: 62 VALYPDD--ETHGVFSGS-AVEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLD--- 115
Query: 159 KEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGS-KINDTGLAILYRSKDF 217
++K NP++ + +FRDP + WR+++GS K G +LY S D
Sbjct: 116 --FVKYDGNPVISKPPEEGTHAFRDPKVNRSNGE--WRMVLGSGKDEKIGRVLLYTSDDL 171
Query: 218 VNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYY 277
+W K E +++ + ECPD + K +L S+++ +
Sbjct: 172 FHW-KYEGAIFEDETTKEIECPDLVRIGEKD---------------ILIYSITSTNSVLF 215
Query: 278 TIGTYNITTDTYIAEEGSFDDNSGLRYDYG-KFYGSKTFFDSAKNRRILWGWINESSTRS 336
++G +EG + D+G FY ++TFF + +R ++ GW+ +S R+
Sbjct: 216 SMGE---------LKEGKLNVEKRGLLDHGTDFYAAQTFFGT--DRVVVIGWL-QSWLRT 263
Query: 337 D---NLKKGWAGLQATPRNLWLDKSGRQLMQWPISEIEKLRGNQVKWPAK 383
++GW G+ + PR L+++ + +L P+ E+ LR +V AK
Sbjct: 264 GLYPTKREGWNGVMSLPRELYVENN--ELKVKPVDELLALRKRKVFETAK 311
>pdb|1W2T|A Chain A, Beta-Fructosidase From Thermotoga Maritima In Complex With
Raffinose
pdb|1W2T|B Chain B, Beta-Fructosidase From Thermotoga Maritima In Complex With
Raffinose
pdb|1W2T|C Chain C, Beta-Fructosidase From Thermotoga Maritima In Complex With
Raffinose
pdb|1W2T|D Chain D, Beta-Fructosidase From Thermotoga Maritima In Complex With
Raffinose
pdb|1W2T|E Chain E, Beta-Fructosidase From Thermotoga Maritima In Complex With
Raffinose
pdb|1W2T|F Chain F, Beta-Fructosidase From Thermotoga Maritima In Complex With
Raffinose
Length = 432
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 166/350 (47%), Gaps = 54/350 (15%)
Query: 48 YRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWTPHD 103
++ YHF P + WMNDPNG + +KG YH FYQY W + WGH+ S D+V+W
Sbjct: 2 FKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLP 61
Query: 104 AAIYPSQPFDANSCWSGSVTILPGGNPAVLYT-----GIDAGNKQVQNLAVPKNLSDPYL 158
A+YP + + +SGS + G ++YT + G K+ Q + + +N D
Sbjct: 62 VALYPDD--ETHGVFSGS-AVEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLD--- 115
Query: 159 KEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGS-KINDTGLAILYRSKDF 217
++K NP++ + +FRDP + WR+++GS K G +LY S D
Sbjct: 116 --FVKYDGNPVISKPPEEGTHAFRDPKVNRSNGE--WRMVLGSGKDEKIGRVLLYTSDDL 171
Query: 218 VNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYY 277
+W K E +++ + +CPD + K +L S+++ +
Sbjct: 172 FHW-KYEGAIFEDETTKEIDCPDLVRIGEKD---------------ILIYSITSTNSVLF 215
Query: 278 TIGTYNITTDTYIAEEGSFDDNSGLRYDYG-KFYGSKTFFDSAKNRRILWGWINESSTRS 336
++G +EG + D+G FY ++TFF + +R ++ GW+ +S R+
Sbjct: 216 SMGE---------LKEGKLNVEKRGLLDHGTDFYAAQTFFGT--DRVVVIGWL-QSWLRT 263
Query: 337 D---NLKKGWAGLQATPRNLWLDKSGRQLMQWPISEIEKLRGNQVKWPAK 383
++GW G+ + PR L+++ + +L P+ E+ LR +V AK
Sbjct: 264 GLYPTKREGWNGVMSLPRELYVENN--ELKVKPVDELLALRKRKVFETAK 311
>pdb|3PIG|A Chain A, Beta-Fructofuranosidase From Bifidobacterium Longum
pdb|3PIG|B Chain B, Beta-Fructofuranosidase From Bifidobacterium Longum
pdb|3PIJ|A Chain A, Beta-Fructofuranosidase From Bifidobacterium Longum -
Complex With Fructose
pdb|3PIJ|B Chain B, Beta-Fructofuranosidase From Bifidobacterium Longum -
Complex With Fructose
Length = 526
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 126/493 (25%), Positives = 202/493 (40%), Gaps = 70/493 (14%)
Query: 52 YHFQPPSSWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWTPHDAAIY 107
YH W+NDPNG YKG +H FYQ W + WGH +STDM+NW
Sbjct: 43 YHIASNGGWINDPNGLCFYKGRWHVFYQLHPYGTQWGPMHWGHVSSTDMLNWKREPIMFA 102
Query: 108 PSQPFDANSCWSGSVTILPGGNPAVLYTGI--------DAGNKQVQNLAVPKNLSDPYLK 159
PS + + +SGS I G+ YTG G+ QVQ A+P N
Sbjct: 103 PSLEQEKDGVFSGSAVIDDNGDLRFYYTGHRWANGHDNTGGDWQVQMTALPDN------D 156
Query: 160 EWIKPPENPLMV--PADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDF 217
E + +++ P D++D +RDP W D + S + G L+ SKD
Sbjct: 157 ELTSATKQGMIIDCPTDKVDH-HYRDPKV-WKTGDTWYMTFGVSSADKRGQMWLFSSKDM 214
Query: 218 VNWTKAEQSLYSTNQSG--MWECPDFFPVSTKSPKG---VDTSVIGPNIKHVLKVSLSNY 272
V W + E+ L+ M ECPDF P+ K + S +G + ++SN
Sbjct: 215 VRW-EYERVLFQHPDPDVFMLECPDFSPIKDKDGNEKWVIGFSAMGSKPSGFMNRNVSNA 273
Query: 273 QQDYYTIGTYNITTDTYIAEEGSFDDNSGLR-YDYG-KFYGSKTFFDSAKNRRILWGWIN 330
Y IGT+ G F + R +D G +Y ++F + R+I++GW++
Sbjct: 274 G---YMIGTWEPG--------GEFKPETEFRLWDCGHNYYAPQSF--NVDGRQIVYGWMS 320
Query: 331 ESSTRSDNLKKGWAGLQATPRNLWLDKSGRQLMQWPISEIEKLRGNQVKWPAKLLER-GS 389
GW G PR + L G ++ P++E+E LR + + + L+ G
Sbjct: 321 PFVQPIPMEDDGWCGQLTLPREITLGDDG-DVVTAPVAEMEGLREDTLDHGSVTLDMDGE 379
Query: 390 MVGITGITAAQADVEISFQTTAFEKAEVLDSIWTNPQFLCPFGLLVLASNGLQEYTAVFF 449
+ A + ++ I + E+A GL + A+ E A +
Sbjct: 380 QIIADDAEAVEIEMTIDLAASTAERA----------------GLKIHAT----EDGAYTY 419
Query: 450 RIFKGQDRHIVLMCSDQSRSSINDDNDKTSYGAFLDLDPVHEKLSIRSLIDRSIVESFGG 509
+ GQ +V+ R ++ + + D + KL +R +DR VE +
Sbjct: 420 VAYDGQIGRVVV-----DRQAMANGDRGYRAAPLTDAELASGKLDLRVFVDRGSVEVYVN 474
Query: 510 GGKACITARIYPT 522
GG +++ Y +
Sbjct: 475 GGHQVLSSYSYAS 487
>pdb|1Y9M|A Chain A, Crystal Structure Of Exo-Inulinase From Aspergillus
Awamori In Spacegroup P212121
pdb|1Y9G|A Chain A, Crystal Structure Of Exo-Inulinase From Aspergillus
Awamori Complexed With Fructose
pdb|1Y4W|A Chain A, Crystal Structure Of Exo-Inulinase From Aspergillus
Awamori In Spacegroup P21
Length = 518
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 136/532 (25%), Positives = 214/532 (40%), Gaps = 66/532 (12%)
Query: 46 QPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWTP 101
QPYR YHF P +WMNDPNG + + G YH F+QY W + WGH+ S D+ +W
Sbjct: 5 QPYRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDLTHWEE 64
Query: 102 HDAAIYPSQPFDANSC---WSGSVTI---------LPGGNPAV-LYTG-------IDAG- 140
A+ ++ F ++ +SGS G P V +YT + +G
Sbjct: 65 KPVALL-ARGFGSDVTEMYFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQ 123
Query: 141 ----NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWR 196
++Q Q++A + + P P + + +FRDP W + W
Sbjct: 124 TVQEDQQSQSIAYSLDDGLTWTTYDAANPVIPNPPSPYEAEYQNFRDPFVFWHDESQKWV 183
Query: 197 VIIGSKINDTGLAILYRSKDFVNWTKAEQSLYSTNQSGMWECPDFFPV---STKSPKGVD 253
V+ + I + +Y S + +W + Q G+WECP + S S K V
Sbjct: 184 VV--TSIAELHKLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPLDSGNSTKWVI 241
Query: 254 TSVIGPNIKHVLKVSLSNYQQDYYTIGTYNITTDTYIAEEGSFDDNSGLRYDYG-KFYGS 312
TS + P S + Y +G ++ TT T A+ +++ D+G FY +
Sbjct: 242 TSGLNPGGPPGTVGSGTQ-----YFVGEFDGTTFTPDADTVYPGNSTANWMDWGPDFYAA 296
Query: 313 KTFFDSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLWLDKSGRQ--LMQWPISEI 370
+ + N + GW+N ++ W A PR++ L G + L+Q P
Sbjct: 297 AGYNGLSLNDHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLVQQPQEAW 356
Query: 371 EKLRGNQVKWPAKLLERGSMVGITGITAAQADVEISFQTTAFEKAEVLDSIWTNPQFLCP 430
+ + + T T V++SF +A KA
Sbjct: 357 SSISNKRPIYSRTFKTLSEGSTNTTTTGETFKVDLSF--SAKSKAST------------- 401
Query: 431 FGLLVLASNGLQEYTAVFFRIFKGQDRHIVLMCSDQSRSSINDDNDKTSYGAFLDLDPVH 490
F + + AS E T V + K Q I L + S ++ +G
Sbjct: 402 FAIALRASANFTEQTLVGYDFAKQQ---IFLDRTHSGDVSFDETFASVYHGPLTPDSTGV 458
Query: 491 EKLSIRSLIDRSIVESFGGGGKACITARIYPTL-AIHDKAHLYAFNNGTEKV 541
KLSI +DRS VE FGG G+ +TA+I+P+ A+H A L + TE V
Sbjct: 459 VKLSI--FVDRSSVEVFGGQGETTLTAQIFPSSDAVH--ARLASTGGTTEDV 506
>pdb|3SC7|X Chain X, First Crystal Structure Of An Endo-Inulinase, From
Aspergillus Ficuum: Structural Analysis And Comparison
With Other Gh32 Enzymes.
pdb|3RWK|X Chain X, First Crystal Structure Of An Endo-Inulinase, From
Aspergillus Ficuum: Structural Analysis And Comparison
With Other Gh32 Enzymes
Length = 516
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 135/542 (24%), Positives = 211/542 (38%), Gaps = 108/542 (19%)
Query: 29 VYRTLQTCQSFS--SSITSQPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYK----L 82
Y TC + S S YR YHF P WMN+PNG + +H F+Q+ +
Sbjct: 7 AYMVWMTCLGLTLPSQAQSNDYRPSYHFTPDQYWMNEPNGLIKIGSTWHLFFQHNPTANV 66
Query: 83 WDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSVTILP--------GGNPAVL- 133
W + WGH+TSTD+++W AI +A ++G+ P NP L
Sbjct: 67 WGNICWGHATSTDLMHWAHKPTAIADENGVEA---FTGTAYYDPNNTSGLGDSANPPYLA 123
Query: 134 -YTGIDAGNK-QVQNLAVPKNLSDPYLKEWIKPPENPLM-----VPADQIDPGSFRDPTT 186
+TG ++ Q Q LA S W K NP++ P D RDP
Sbjct: 124 WFTGYTTSSQTQDQRLA----FSVDNGATWTKFQGNPIISTSQEAPHDITGGLESRDPKV 179
Query: 187 AWIGPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSLYSTNQSGM------WECPD 240
+ W +++ D + S D +NWT + L ST+ +G+ WE PD
Sbjct: 180 FFHRQSGNWIMVLAHGGQDK--LSFWTSADTINWTW-QSDLKSTSINGLSSDITGWEVPD 236
Query: 241 FFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYYTIGTYNITTDTYIAEEGSFD--- 297
F + + + V + + G + +A GSFD
Sbjct: 237 MFELPVE------------GTEETTWVVMMTPAEGSPAGG------NGVLAITGSFDGKS 278
Query: 298 ------DNSGLRYDYGK-FYGSKTFFD--SAKNRRILWGWINESSTRSDNLKKGWAGLQA 348
D S + D G+ F G+ ++ + ++ RRI+ +N S S+ W G+ +
Sbjct: 279 FTADPVDASTMWLDNGRDFDGALSWVNVPASDGRRIIAAVMN--SYGSNPPTTTWKGMLS 336
Query: 349 TPRNLWLDKSGRQ--LMQWPISEIE------KLRGNQVKWPAKLLERGSMVGITGITAAQ 400
PR L L K G Q +Q PI+E++ ++ NQ P + L ++ I
Sbjct: 337 FPRTLSLKKVGTQQHFVQQPITELDTISTSLQILANQTITPGQTL-------LSSIRGTA 389
Query: 401 ADVEISFQTTAFEKAEVLDSIWTNPQFLCPFGLLVLASNGLQEYTAVFFRIFKGQDRHIV 460
DV ++F A L + G E T + + Q +
Sbjct: 390 LDVRVAFYPDAGSV------------------LSLAVRKGASEQTVIKYT----QSDATL 427
Query: 461 LMCSDQSRSSINDDNDKTSYGAFLDLDPVHEKLSIRSLIDRSIVESFGGGGKACITARIY 520
+ +S D + A L+ D +SIR L+D VE FGG G+A I+ I+
Sbjct: 428 SVDRTESGDISYDPAAGGVHTAKLEEDGTG-LVSIRVLVDTCSVEVFGGQGEAVISDLIF 486
Query: 521 PT 522
P+
Sbjct: 487 PS 488
>pdb|3KF5|A Chain A, Structure Of Invertase From Schwanniomyces Occidentalis
pdb|3KF5|B Chain B, Structure Of Invertase From Schwanniomyces Occidentalis
Length = 512
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 94/222 (42%), Gaps = 36/222 (16%)
Query: 44 TSQPYRTGYHFQPPSSWMNDPNGPMIYK--GIYHFFYQYKLWDT-----VVWGHSTSTDM 96
TS+ R HF P WMNDPNG K ++H ++QY T + WGH+TS D+
Sbjct: 8 TSEYNRPLIHFTPEKGWMNDPNGLFYDKTAKLWHLYFQYNPNATAWGQPLYWGHATSNDL 67
Query: 97 VNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAGNK------------QV 144
V+W H+ AI P D +SGS+ + + ID + Q
Sbjct: 68 VHWDEHEIAIGPEH--DNEGIFSGSIVVDHNNTSGFFNSSIDPNQRIVAIYTNNIPDNQT 125
Query: 145 QNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIN 204
Q++A +L Y + K NP++ + FRDP W W +++ SK
Sbjct: 126 QDIAF--SLDGGYT--FTKYENNPVI----DVSSNQFRDPKVFWHEDSNQW-IMVVSKSQ 176
Query: 205 DTGLAILYRSKDFVNWTKAEQ--SLYSTNQSGMWECPDFFPV 244
+ + I + S + NW S Y NQ +ECP V
Sbjct: 177 EYKIQI-FGSANLKNWVLNSNFSSGYYGNQ---YECPGLIEV 214
>pdb|3KF3|A Chain A, Structure Of Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Fructose
pdb|3KF3|B Chain B, Structure Of Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Fructose
Length = 509
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 94/222 (42%), Gaps = 36/222 (16%)
Query: 44 TSQPYRTGYHFQPPSSWMNDPNGPMIYK--GIYHFFYQYKLWDT-----VVWGHSTSTDM 96
TS+ R HF P WMNDPNG K ++H ++QY T + WGH+TS D+
Sbjct: 5 TSEYNRPLIHFTPEKGWMNDPNGLFYDKTAKLWHLYFQYNPNATAWGQPLYWGHATSNDL 64
Query: 97 VNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAGNK------------QV 144
V+W H+ AI P D +SGS+ + + ID + Q
Sbjct: 65 VHWDEHEIAIGPEH--DNEGIFSGSIVVDHNNTSGFFNSSIDPNQRIVAIYTNNIPDNQT 122
Query: 145 QNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIN 204
Q++A +L Y + K NP++ + FRDP W W +++ SK
Sbjct: 123 QDIAF--SLDGGYT--FTKYENNPVI----DVSSNQFRDPKVFWHEDSNQW-IMVVSKSQ 173
Query: 205 DTGLAILYRSKDFVNWTKAEQ--SLYSTNQSGMWECPDFFPV 244
+ + I + S + NW S Y NQ +ECP V
Sbjct: 174 EYKIQI-FGSANLKNWVLNSNFSSGYYGNQ---YECPGLIEV 211
>pdb|3U75|A Chain A, Structure Of E230a-Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Fructosylnystose
pdb|3U75|B Chain B, Structure Of E230a-Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Fructosylnystose
pdb|3U75|C Chain C, Structure Of E230a-Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Fructosylnystose
pdb|3U75|D Chain D, Structure Of E230a-Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Fructosylnystose
Length = 535
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 93/222 (41%), Gaps = 36/222 (16%)
Query: 44 TSQPYRTGYHFQPPSSWMNDPNGPMIYK--GIYHFFYQYKLWDT-----VVWGHSTSTDM 96
TS+ R HF P WMNDPNG K ++H ++QY T + WGH+TS D+
Sbjct: 31 TSEYNRPLIHFTPEKGWMNDPNGLFYDKTAKLWHLYFQYNPNATAWGQPLYWGHATSNDL 90
Query: 97 VNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAGNK------------QV 144
V+W H+ AI P D +SGS+ + + ID + Q
Sbjct: 91 VHWDEHEIAIGPEH--DNEGIFSGSIVVDHNNTSGFFNSSIDPNQRIVAIYTNNIPDNQT 148
Query: 145 QNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIN 204
Q++A +L Y + K NP++ + FRDP W W +++ SK
Sbjct: 149 QDIAF--SLDGGY--TFTKYENNPVI----DVSSNQFRDPKVFWHEDSNQW-IMVVSKSQ 199
Query: 205 DTGLAILYRSKDFVNWTKAEQ--SLYSTNQSGMWECPDFFPV 244
+ + I + S + NW S Y NQ + CP V
Sbjct: 200 EYKIQI-FGSANLKNWVLNSNFSSGYYGNQ---YACPGLIEV 237
>pdb|4FFG|A Chain A, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens In Complex With Dfa-Iv
pdb|4FFG|B Chain B, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens In Complex With Dfa-Iv
pdb|4FFG|C Chain C, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens In Complex With Dfa-Iv
pdb|4FFG|D Chain D, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens In Complex With Dfa-Iv
Length = 492
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 117/304 (38%), Gaps = 51/304 (16%)
Query: 52 YHFQPPSSWMNDPNGPMIYKGIYHFFYQYKLWDTVV--WGHSTSTDMVNWTPHDAAIYPS 109
YH PPS W+ DP P+ G Y +Y + + W H+++TD V +T H + P
Sbjct: 4 YHMTPPSGWLCDPQRPVTTHGAYQLYYLHSDQNNGPGGWDHASTTDGVAFT-HHGTVMPL 62
Query: 110 QPFDANSCWSGSVTI-------LPGGNPAVLYTGIDAGNKQVQNLAVP---------KNL 153
+P WSGS + G L T G ++ Q + L
Sbjct: 63 RP--DFPVWSGSAVVDTANTAGFGAGAVVALATQPTDGVRKYQEQYLYWSTDGGFTFTAL 120
Query: 154 SDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYR 213
DP + + PA+ + FRDP W W +IG A Y
Sbjct: 121 PDPVI---VNTDGRAATTPAEIENAEWFRDPKIHWDTARGEWVCVIGR----LRYAAFYT 173
Query: 214 SKDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKH-VLKVSLSNY 272
S + +WT Y + G ECPD F ++ +H VL S+
Sbjct: 174 SPNLRDWTLRRNFDYPNHALGGIECPDLFEITADD-----------GTRHWVLAASM--- 219
Query: 273 QQDYYTIG---TYNITTDTYIAEEGSFDDNSGLRYDYG-KFYGSKTF--FDSAKNRRILW 326
D Y IG TY T T+ E+ DD + D+G +Y + T+ D+ + +R+
Sbjct: 220 --DAYGIGLPMTYAYWTGTWDGEQFHADDLTPQWLDWGWDWYAAVTWPSIDAPETKRLAI 277
Query: 327 GWIN 330
W+N
Sbjct: 278 AWMN 281
>pdb|4FFF|A Chain A, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens
pdb|4FFF|B Chain B, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens
pdb|4FFF|C Chain C, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens
pdb|4FFF|D Chain D, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens
Length = 490
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 117/304 (38%), Gaps = 51/304 (16%)
Query: 52 YHFQPPSSWMNDPNGPMIYKGIYHFFYQYKLWDTVV--WGHSTSTDMVNWTPHDAAIYPS 109
YH PPS W+ DP P+ G Y +Y + + W H+++TD V +T H + P
Sbjct: 4 YHMTPPSGWLCDPQRPVTTHGAYQLYYLHSDQNNGPGGWDHASTTDGVAFT-HHGTVMPL 62
Query: 110 QPFDANSCWSGSVTI-------LPGGNPAVLYTGIDAGNKQVQNLAVP---------KNL 153
+P WSGS + G L T G ++ Q + L
Sbjct: 63 RP--DFPVWSGSAVVDTANTAGFGAGAVVALATQPTDGVRKYQEQYLYWSTDGGFTFTAL 120
Query: 154 SDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYR 213
DP + + PA+ + FRDP W W +IG A Y
Sbjct: 121 PDPVI---VNTDGRAATTPAEIENAEWFRDPKIHWDTARGEWVCVIGR----LRYAAFYT 173
Query: 214 SKDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKH-VLKVSLSNY 272
S + +WT Y + G ECPD F ++ +H VL S+
Sbjct: 174 SPNLRDWTLRRNFDYPNHALGGIECPDLFEITADD-----------GTRHWVLAASM--- 219
Query: 273 QQDYYTIG---TYNITTDTYIAEEGSFDDNSGLRYDYG-KFYGSKTF--FDSAKNRRILW 326
D Y IG TY T T+ E+ DD + D+G +Y + T+ D+ + +R+
Sbjct: 220 --DAYGIGLPMTYAYWTGTWDGEQFHADDLTPQWLDWGWDWYAAVTWPSIDAPETKRLAI 277
Query: 327 GWIN 330
W+N
Sbjct: 278 AWMN 281
>pdb|3U14|A Chain A, Structure Of D50a-Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Inulin
pdb|3U14|B Chain B, Structure Of D50a-Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Inulin
Length = 535
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 93/222 (41%), Gaps = 36/222 (16%)
Query: 44 TSQPYRTGYHFQPPSSWMNDPNGPMIYK--GIYHFFYQYKLWDT-----VVWGHSTSTDM 96
TS+ R HF P WMN PNG K ++H ++QY T + WGH+TS D+
Sbjct: 31 TSEYNRPLIHFTPEKGWMNAPNGLFYDKTAKLWHLYFQYNPNATAWGQPLYWGHATSNDL 90
Query: 97 VNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAGNK------------QV 144
V+W H+ AI P D +SGS+ + + ID + Q
Sbjct: 91 VHWDEHEIAIGPEH--DNEGIFSGSIVVDHNNTSGFFNSSIDPNQRIVAIYTNNIPDNQT 148
Query: 145 QNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIN 204
Q++A +L Y + K NP++ + FRDP W W +++ SK
Sbjct: 149 QDIAF--SLDGGY--TFTKYENNPVI----DVSSNQFRDPKVFWHEDSNQW-IMVVSKSQ 199
Query: 205 DTGLAILYRSKDFVNWTKAEQ--SLYSTNQSGMWECPDFFPV 244
+ + I + S + NW S Y NQ +ECP V
Sbjct: 200 EYKIQI-FGSANLKNWVLNSNFSSGYYGNQ---YECPGLIEV 237
>pdb|4FFH|A Chain A, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Sucrose
pdb|4FFH|B Chain B, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Sucrose
pdb|4FFH|C Chain C, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Sucrose
pdb|4FFH|D Chain D, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Sucrose
pdb|4FFI|A Chain A, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Levanbiose
pdb|4FFI|B Chain B, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Levanbiose
pdb|4FFI|C Chain C, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Levanbiose
pdb|4FFI|D Chain D, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Levanbiose
Length = 492
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 117/304 (38%), Gaps = 51/304 (16%)
Query: 52 YHFQPPSSWMNDPNGPMIYKGIYHFFYQYKLWDTVV--WGHSTSTDMVNWTPHDAAIYPS 109
YH PPS W+ +P P+ G Y +Y + + W H+++TD V +T H + P
Sbjct: 4 YHMTPPSGWLCNPQRPVTTHGAYQLYYLHSDQNNGPGGWDHASTTDGVAFT-HHGTVMPL 62
Query: 110 QPFDANSCWSGSVTI-------LPGGNPAVLYTGIDAGNKQVQNLAVP---------KNL 153
+P WSGS + G L T G ++ Q + L
Sbjct: 63 RP--DFPVWSGSAVVDTANTAGFGAGAVVALATQPTDGVRKYQEQYLYWSTDGGFTFTAL 120
Query: 154 SDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYR 213
DP + + PA+ + FRDP W W +IG A Y
Sbjct: 121 PDPVI---VNTDGRAATTPAEIENAEWFRDPKIHWDTARGEWVCVIGR----LRYAAFYT 173
Query: 214 SKDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKH-VLKVSLSNY 272
S + +WT Y + G ECPD F ++ +H VL S+
Sbjct: 174 SPNLRDWTLRRNFDYPNHALGGIECPDLFEITADD-----------GTRHWVLAASM--- 219
Query: 273 QQDYYTIG---TYNITTDTYIAEEGSFDDNSGLRYDYG-KFYGSKTF--FDSAKNRRILW 326
D Y IG TY T T+ E+ DD + D+G +Y + T+ D+ + +R+
Sbjct: 220 --DAYGIGLPMTYAYWTGTWDGEQFHADDLTPQWLDWGWDWYAAVTWPSIDAPETKRLAI 277
Query: 327 GWIN 330
W+N
Sbjct: 278 AWMN 281
>pdb|1TWL|A Chain A, Inorganic Pyrophosphatase From Pyrococcus Furiosus
Pfu-264096-001
Length = 186
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 12/72 (16%)
Query: 99 WTPHDAAIYP------SQPFDANSCWSGSV---TILPGGNPAVLYTGIDAGNKQVQNLAV 149
+ P D I P PFD V TI+ P L+ ID+G+K + LAV
Sbjct: 59 FYPVDYGIIPRTWYEDDDPFDIMVIMREPVYPLTII-EARPIGLFKMIDSGDKDYKVLAV 117
Query: 150 PKNLSDPYLKEW 161
P + DPY K+W
Sbjct: 118 P--VEDPYFKDW 127
>pdb|1UDE|A Chain A, Crystal Structure Of The Inorganic Pyrophosphatase From
The Hyperthermophilic Archaeon Pyrococcus Horikoshii Ot3
pdb|1UDE|B Chain B, Crystal Structure Of The Inorganic Pyrophosphatase From
The Hyperthermophilic Archaeon Pyrococcus Horikoshii Ot3
pdb|1UDE|C Chain C, Crystal Structure Of The Inorganic Pyrophosphatase From
The Hyperthermophilic Archaeon Pyrococcus Horikoshii Ot3
Length = 195
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Query: 128 GNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEW 161
P L+ ID+G+K + LAVP + DPY K+W
Sbjct: 105 ARPIGLFKMIDSGDKDYKVLAVP--VEDPYFKDW 136
>pdb|2FYN|C Chain C, Crystal Structure Analysis Of The Double Mutant
Rhodobacter Sphaeroides Bc1 Complex
pdb|2FYN|F Chain F, Crystal Structure Analysis Of The Double Mutant
Rhodobacter Sphaeroides Bc1 Complex
pdb|2FYN|I Chain I, Crystal Structure Analysis Of The Double Mutant
Rhodobacter Sphaeroides Bc1 Complex
pdb|2FYN|L Chain L, Crystal Structure Analysis Of The Double Mutant
Rhodobacter Sphaeroides Bc1 Complex
pdb|2FYN|O Chain O, Crystal Structure Analysis Of The Double Mutant
Rhodobacter Sphaeroides Bc1 Complex
pdb|2FYN|R Chain R, Crystal Structure Analysis Of The Double Mutant
Rhodobacter Sphaeroides Bc1 Complex
pdb|2QJY|C Chain C, Crystal Structure Of Rhodobacter Sphaeroides Double Mutant
With Stigmatellin And Uq2
pdb|2QJY|F Chain F, Crystal Structure Of Rhodobacter Sphaeroides Double Mutant
With Stigmatellin And Uq2
pdb|2QJY|I Chain I, Crystal Structure Of Rhodobacter Sphaeroides Double Mutant
With Stigmatellin And Uq2
pdb|2QJY|L Chain L, Crystal Structure Of Rhodobacter Sphaeroides Double Mutant
With Stigmatellin And Uq2
pdb|2QJY|O Chain O, Crystal Structure Of Rhodobacter Sphaeroides Double Mutant
With Stigmatellin And Uq2
pdb|2QJY|R Chain R, Crystal Structure Of Rhodobacter Sphaeroides Double Mutant
With Stigmatellin And Uq2
Length = 187
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 309 FYGSKTFFDSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLWLDKSGRQLMQWPI 367
F +T D R + G + +++ R+ N+ AG +AT +N LD++G L+ W +
Sbjct: 73 FIRRRTEADIELGRSVQLGQLVDTNARNANID---AGAEATDQNRTLDEAGEWLVMWGV 128
>pdb|2QJP|C Chain C, Crystal Structure Of Wild Type Rhodobacter Sphaeroides
With Stigmatellin And Antimycin Inhibited
pdb|2QJP|F Chain F, Crystal Structure Of Wild Type Rhodobacter Sphaeroides
With Stigmatellin And Antimycin Inhibited
pdb|2QJP|I Chain I, Crystal Structure Of Wild Type Rhodobacter Sphaeroides
With Stigmatellin And Antimycin Inhibited
pdb|2QJP|L Chain L, Crystal Structure Of Wild Type Rhodobacter Sphaeroides
With Stigmatellin And Antimycin Inhibited
Length = 179
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 309 FYGSKTFFDSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLWLDKSGRQLMQWPIS 368
F +T D R + G + +++ R+ N+ AG +AT +N LD++G L+ W +
Sbjct: 65 FIRRRTEADIELGRSVQLGQLVDTNARNANID---AGAEATDQNRTLDEAGEWLVMWGVC 121
>pdb|2QJK|C Chain C, Crystal Structure Analysis Of Mutant Rhodobacter
Sphaeroides Bc1 With Stigmatellin And Antimycin
pdb|2QJK|F Chain F, Crystal Structure Analysis Of Mutant Rhodobacter
Sphaeroides Bc1 With Stigmatellin And Antimycin
pdb|2QJK|I Chain I, Crystal Structure Analysis Of Mutant Rhodobacter
Sphaeroides Bc1 With Stigmatellin And Antimycin
pdb|2QJK|L Chain L, Crystal Structure Analysis Of Mutant Rhodobacter
Sphaeroides Bc1 With Stigmatellin And Antimycin
pdb|2QJK|O Chain O, Crystal Structure Analysis Of Mutant Rhodobacter
Sphaeroides Bc1 With Stigmatellin And Antimycin
pdb|2QJK|R Chain R, Crystal Structure Analysis Of Mutant Rhodobacter
Sphaeroides Bc1 With Stigmatellin And Antimycin
Length = 179
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 309 FYGSKTFFDSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLWLDKSGRQLMQWPIS 368
F +T D R + G + +++ R+ N+ AG +AT +N LD++G L+ W +
Sbjct: 65 FIRRRTEADIELGRSVQLGQLVDTNARNANID---AGAEATDQNRTLDEAGEWLVMWGVC 121
>pdb|2YV4|A Chain A, Crystal Structure Of C-Terminal Sua5 Domain From
Pyrococcus Horikoshii Hypothetical Sua5 Protein Ph0435
Length = 105
Score = 29.3 bits (64), Expect = 5.5, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 371 EKLRGNQVKWPAKLLERGSMVGITGITAAQADVEISFQTTAFEKAEVLDSIWTNPQFLCP 430
EK++G + +L ERG VG+ G + AD E F ++ E EV +++ ++
Sbjct: 14 EKVKGKITELVKELKERGKKVGVIGSESYNAD-EFFFLGSSVE--EVAKNLFKALRYXDK 70
Query: 431 FGLLVLASNGLQEY---TAVFFRIFKGQDRHIV 460
G+ V+ + G++E AV R+ K IV
Sbjct: 71 AGVDVVIAEGVEERGLGLAVXNRLRKASGYKIV 103
>pdb|2NVF|A Chain A, Soluble Domain Of Rieske Iron-Sulfur Protein
Length = 141
Score = 29.3 bits (64), Expect = 6.2, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 9/66 (13%)
Query: 308 KFYGSKTFF------DSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLWLDKSGRQ 361
KF G F D R + G + +++ R+ N+ AG +AT +N LD++G
Sbjct: 20 KFLGKPIFIRRRTEADIELGRSVQLGQLVDTNARNANID---AGAEATDQNRTLDEAGEW 76
Query: 362 LMQWPI 367
L+ W +
Sbjct: 77 LVMWGV 82
>pdb|2NVG|A Chain A, Soluble Domain Of Rieske Iron Sulfur Protein
Length = 141
Score = 29.3 bits (64), Expect = 6.5, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 9/66 (13%)
Query: 308 KFYGSKTFF------DSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLWLDKSGRQ 361
KF G F D R + G + +++ R+ N+ AG +AT +N LD++G
Sbjct: 20 KFLGKPIFIRRRTEADIELGRSVQLGQLVDTNARNANID---AGAEATDQNRTLDEAGEW 76
Query: 362 LMQWPI 367
L+ W +
Sbjct: 77 LVMWGV 82
>pdb|2NUM|A Chain A, Soluble Domain Of Rieske Iron-Sulfur Protein
Length = 141
Score = 29.3 bits (64), Expect = 6.5, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 9/66 (13%)
Query: 308 KFYGSKTFF------DSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLWLDKSGRQ 361
KF G F D R + G + +++ R+ N+ AG +AT +N LD++G
Sbjct: 20 KFLGKPIFIRRRTEADIELGRSVQLGQLVDTNARNANID---AGAEATDQNRTLDEAGEW 76
Query: 362 LMQWPI 367
L+ W +
Sbjct: 77 LVMWGV 82
>pdb|2WZS|A Chain A, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482 In Complex
With Mannoimidazole
pdb|2WZS|B Chain B, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482 In Complex
With Mannoimidazole
pdb|2WZS|C Chain C, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482 In Complex
With Mannoimidazole
pdb|2WZS|D Chain D, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482 In Complex
With Mannoimidazole
pdb|2WZS|E Chain E, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482 In Complex
With Mannoimidazole
pdb|2WZS|F Chain F, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482 In Complex
With Mannoimidazole
pdb|2WZS|G Chain G, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482 In Complex
With Mannoimidazole
pdb|2WZS|H Chain H, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482 In Complex
With Mannoimidazole
Length = 738
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/102 (19%), Positives = 40/102 (39%), Gaps = 5/102 (4%)
Query: 70 YKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSVTILPGGN 129
Y+ Y Y+ L+ + + ++++P++ + P F W + P N
Sbjct: 280 YRTFYSCLYRSLLFPRKFYELDANGQPIHYSPYNGQVLPGYMFTDTGFWDTFRCLFPLLN 339
Query: 130 PAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMV 171
++Y + NK++Q + L + EW P MV
Sbjct: 340 --LMYPSV---NKEMQEGLINTYLESGFFPEWASPGHRGCMV 376
>pdb|2WVZ|A Chain A, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482
pdb|2WVZ|B Chain B, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482
pdb|2WVZ|C Chain C, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482
pdb|2WVZ|D Chain D, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482
pdb|2WW0|A Chain A, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482
pdb|2WW0|B Chain B, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482
pdb|2WW0|C Chain C, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482
pdb|2WW0|D Chain D, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482
pdb|2WW0|E Chain E, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482
pdb|2WW0|F Chain F, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482
pdb|2WW0|G Chain G, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482
pdb|2WW0|H Chain H, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482
pdb|2WW1|A Chain A, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482 In Complex
With Thiomannobioside
pdb|2WW1|B Chain B, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482 In Complex
With Thiomannobioside
pdb|2WW1|C Chain C, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482 In Complex
With Thiomannobioside
pdb|2WW1|D Chain D, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482 In Complex
With Thiomannobioside
pdb|2WW3|A Chain A, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482 In Complex
With Thiomannobioside
pdb|2WW3|B Chain B, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482 In Complex
With Thiomannobioside
pdb|2WW3|C Chain C, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482 In Complex
With Thiomannobioside
pdb|2WW3|D Chain D, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482 In Complex
With Thiomannobioside
pdb|2WW3|E Chain E, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482 In Complex
With Thiomannobioside
pdb|2WW3|F Chain F, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482 In Complex
With Thiomannobioside
Length = 744
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/102 (19%), Positives = 40/102 (39%), Gaps = 5/102 (4%)
Query: 70 YKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSVTILPGGN 129
Y+ Y Y+ L+ + + ++++P++ + P F W + P N
Sbjct: 280 YRTFYSCLYRSLLFPRKFYELDANGQPIHYSPYNGQVLPGYMFTDTGFWDTFRCLFPLLN 339
Query: 130 PAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMV 171
++Y + NK++Q + L + EW P MV
Sbjct: 340 --LMYPSV---NKEMQEGLINTYLESGFFPEWASPGHRGCMV 376
>pdb|2NVE|A Chain A, Soluble Domain Of Rieske Iron Sulfur Protein
Length = 141
Score = 29.3 bits (64), Expect = 6.6, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 9/66 (13%)
Query: 308 KFYGSKTFF------DSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLWLDKSGRQ 361
KF G F D R + G + +++ R+ N+ AG +AT +N LD++G
Sbjct: 20 KFLGKPIFIRRRTEADIELGRSVQLGQLVDTNARNANID---AGAEATDQNRTLDEAGEW 76
Query: 362 LMQWPI 367
L+ W +
Sbjct: 77 LVMWGV 82
>pdb|2NUK|A Chain A, Soluble Domain Of The Rieske Iron-Sulfur Protein From
Rhodobacter Sphaeroides
Length = 141
Score = 29.3 bits (64), Expect = 6.8, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 9/66 (13%)
Query: 308 KFYGSKTFF------DSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLWLDKSGRQ 361
KF G F D R + G + +++ R+ N+ AG +AT +N LD++G
Sbjct: 20 KFLGKPIFIRRRTEADIELGRSVQLGQLVDTNARNANID---AGAEATDQNRTLDEAGEW 76
Query: 362 LMQWPI 367
L+ W +
Sbjct: 77 LVMWGV 82
>pdb|2NWF|A Chain A, Soluble Domain Of Rieske Iron Sulfur Protein
Length = 141
Score = 28.9 bits (63), Expect = 8.2, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 9/66 (13%)
Query: 308 KFYGSKTFF------DSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLWLDKSGRQ 361
KF G F D R + G + +++ R+ N+ AG +AT +N LD++G
Sbjct: 20 KFLGKPIFIRRRTEADIELGRSVQLGQLVDTNARNANID---AGAEATDQNRTLDEAGEW 76
Query: 362 LMQWPI 367
L+ W +
Sbjct: 77 LVMWGV 82
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,356,082
Number of Sequences: 62578
Number of extensions: 821766
Number of successful extensions: 1833
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1713
Number of HSP's gapped (non-prelim): 54
length of query: 557
length of database: 14,973,337
effective HSP length: 104
effective length of query: 453
effective length of database: 8,465,225
effective search space: 3834746925
effective search space used: 3834746925
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)