Query 008686
Match_columns 557
No_of_seqs 216 out of 1541
Neff 7.3
Searched_HMMs 46136
Date Thu Mar 28 15:18:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008686.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008686hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0228 Beta-fructofuranosidas 100.0 3E-105 7E-110 824.3 38.5 545 4-555 7-571 (571)
2 COG1621 SacC Beta-fructosidase 100.0 9.6E-97 2E-101 783.3 45.1 445 43-553 23-486 (486)
3 TIGR01322 scrB_fam sucrose-6-p 100.0 1.1E-88 2.4E-93 734.8 47.3 412 43-522 8-445 (445)
4 smart00640 Glyco_32 Glycosyl h 100.0 2.6E-84 5.7E-89 698.9 49.2 417 53-511 1-437 (437)
5 PF00251 Glyco_hydro_32N: Glyc 100.0 2E-73 4.2E-78 588.5 28.3 295 53-366 1-308 (308)
6 cd08996 GH32_B_Fructosidase Gl 100.0 4.7E-65 1E-69 523.5 33.2 282 59-369 1-298 (298)
7 cd08995 GH32_Aec43_like Glycos 100.0 8E-54 1.7E-58 436.5 29.9 262 62-359 1-278 (280)
8 cd08979 GH_J Glycosyl hydrolas 100.0 2.8E-37 6E-42 312.5 26.7 239 62-332 7-264 (276)
9 cd08772 GH43_62_32_68 Glycosyl 100.0 5E-35 1.1E-39 296.5 27.2 268 62-354 1-286 (286)
10 cd08997 GH68 Glycosyl hydrolas 99.9 1.4E-24 3.1E-29 224.7 30.4 265 63-358 9-344 (349)
11 cd08994 GH43_like_2 Glycosyl h 99.9 2.6E-20 5.7E-25 190.9 20.1 174 62-245 81-282 (291)
12 cd09004 GH43_bXyl Glycosyl hyd 99.8 2.9E-19 6.3E-24 181.8 20.5 189 58-280 5-197 (275)
13 cd08993 GH43_DUF377 Glycosyl h 99.8 3.5E-19 7.5E-24 180.6 19.4 158 63-239 2-168 (268)
14 cd08994 GH43_like_2 Glycosyl h 99.8 1.7E-17 3.6E-22 170.2 25.1 196 52-270 4-225 (291)
15 cd08984 GH43_5 Glycosyl hydrol 99.8 6E-18 1.3E-22 173.9 20.7 158 61-245 79-246 (294)
16 cd08999 GH43_ABN_2 Glycosyl hy 99.8 2E-17 4.4E-22 168.9 22.0 186 59-271 6-200 (287)
17 cd08990 GH43_AXH_like Glycosyl 99.7 2.8E-16 6.1E-21 159.8 20.5 191 63-280 2-206 (274)
18 cd08978 GH_F Glycosyl hydrolas 99.7 1.8E-15 3.9E-20 152.5 20.4 191 63-280 2-201 (271)
19 cd08991 GH43_bXyl_2 Glycosyl h 99.6 1.1E-14 2.4E-19 149.5 20.9 180 63-271 2-204 (294)
20 cd08992 GH43_like_1 Glycosyl h 99.6 1.3E-14 2.9E-19 150.5 19.0 167 49-223 24-241 (349)
21 cd08998 GH43_ABN_1 Glycosyl hy 99.6 5.1E-14 1.1E-18 144.3 20.6 179 61-270 1-192 (288)
22 cd08984 GH43_5 Glycosyl hydrol 99.6 1.4E-13 3.1E-18 141.5 19.7 165 61-245 11-193 (294)
23 cd08985 GH43_6 Glycosyl hydrol 99.5 1.9E-12 4.2E-17 131.2 21.0 194 63-291 5-211 (265)
24 PF04041 DUF377: Domain of unk 99.5 6E-13 1.3E-17 137.7 17.0 160 62-238 33-201 (312)
25 cd09000 GH43_XYL_1 Glycosyl hy 99.5 5.5E-12 1.2E-16 129.3 20.2 178 59-270 6-196 (288)
26 cd09003 GH43_AXH_1 Glycosyl hy 99.4 9.9E-12 2.2E-16 128.9 19.9 182 59-270 7-215 (311)
27 PF04616 Glyco_hydro_43: Glyco 99.4 1.8E-11 3.9E-16 124.7 19.8 183 59-271 8-200 (286)
28 cd08983 GH43_4 Glycosyl hydrol 99.4 1.2E-10 2.7E-15 118.7 22.5 178 58-269 15-206 (276)
29 PF08244 Glyco_hydro_32C: Glyc 99.3 7.3E-12 1.6E-16 104.9 9.4 75 429-511 9-86 (86)
30 cd08988 GH43_ABN Glycosyl hydr 99.3 1.8E-10 3.9E-15 117.6 21.3 179 63-270 2-193 (279)
31 cd08981 GH43_2 Glycosyl hydrol 99.3 3.5E-10 7.6E-15 116.2 19.6 131 59-201 4-142 (291)
32 cd08979 GH_J Glycosyl hydrolas 99.3 1E-10 2.2E-15 118.2 15.3 134 59-202 64-209 (276)
33 cd08992 GH43_like_1 Glycosyl h 99.2 6E-10 1.3E-14 116.0 18.5 166 61-245 112-310 (349)
34 cd08989 GH43_XYL Glycosyl hydr 99.2 1.8E-09 4E-14 109.6 19.5 174 59-271 6-190 (269)
35 cd09001 GH43_XYL_2 Glycosyl hy 99.1 1.6E-09 3.5E-14 110.1 17.7 169 59-270 9-191 (269)
36 cd08980 GH43_1 Glycosyl hydrol 99.1 2.2E-09 4.7E-14 110.1 18.1 188 63-281 2-205 (288)
37 cd08986 GH43_7 Glycosyl hydrol 99.1 2.2E-09 4.7E-14 109.2 17.8 174 60-270 1-202 (269)
38 COG2152 Predicted glycosylase 99.1 2.1E-09 4.6E-14 107.6 15.8 151 61-228 31-193 (314)
39 cd08993 GH43_DUF377 Glycosyl h 99.1 2.4E-09 5.1E-14 108.7 15.2 98 119-225 2-103 (268)
40 cd09002 GH43_XYL_3 Glycosyl hy 99.1 7.5E-09 1.6E-13 105.8 18.2 121 60-201 14-134 (280)
41 PF02435 Glyco_hydro_68: Levan 98.9 6.7E-08 1.5E-12 102.0 20.3 213 39-269 34-318 (428)
42 cd08987 GH62 Glycosyl hydrolas 98.9 1E-07 2.2E-12 95.8 18.9 201 54-291 14-229 (303)
43 cd08982 GH43_3 Glycosyl hydrol 98.9 9.3E-08 2E-12 98.5 18.4 170 62-281 4-191 (295)
44 cd08995 GH32_Aec43_like Glycos 98.7 6.5E-07 1.4E-11 91.3 16.7 130 61-203 62-201 (280)
45 cd08999 GH43_ABN_2 Glycosyl hy 98.6 1.5E-06 3.3E-11 88.6 17.8 153 61-225 62-227 (287)
46 cd08990 GH43_AXH_like Glycosyl 98.6 5.1E-06 1.1E-10 84.5 20.3 150 59-226 62-219 (274)
47 cd08991 GH43_bXyl_2 Glycosyl h 98.6 7.4E-06 1.6E-10 84.1 20.8 152 60-223 54-227 (294)
48 cd08978 GH_F Glycosyl hydrolas 98.5 3.5E-06 7.6E-11 84.7 16.7 155 58-224 56-216 (271)
49 PF04041 DUF377: Domain of unk 98.5 8.9E-07 1.9E-11 91.9 11.6 103 114-225 29-134 (312)
50 cd08772 GH43_62_32_68 Glycosyl 98.4 8.8E-06 1.9E-10 82.2 16.5 155 59-223 58-224 (286)
51 cd08986 GH43_7 Glycosyl hydrol 98.3 4.5E-06 9.9E-11 84.8 12.6 121 181-326 2-147 (269)
52 cd08983 GH43_4 Glycosyl hydrol 98.3 2.6E-06 5.6E-11 87.0 10.2 89 166-270 5-99 (276)
53 cd08998 GH43_ABN_1 Glycosyl hy 98.3 3.6E-05 7.8E-10 78.9 17.4 152 58-221 55-217 (288)
54 cd08996 GH32_B_Fructosidase Gl 98.2 1.4E-05 2.9E-10 82.3 12.9 129 63-203 65-202 (298)
55 cd08981 GH43_2 Glycosyl hydrol 98.2 3E-05 6.4E-10 79.9 13.8 124 179-326 4-139 (291)
56 cd09004 GH43_bXyl Glycosyl hyd 98.1 0.00029 6.3E-09 71.6 18.6 141 61-225 66-213 (275)
57 PF04616 Glyco_hydro_43: Glyco 98.0 0.0001 2.2E-09 75.0 15.0 148 64-223 70-222 (286)
58 cd09002 GH43_XYL_3 Glycosyl hy 98.0 7.4E-05 1.6E-09 76.5 14.0 78 166-270 7-84 (280)
59 COG3507 XynB Beta-xylosidase [ 98.0 0.00016 3.4E-09 78.4 16.5 166 62-245 31-215 (549)
60 cd08997 GH68 Glycosyl hydrolas 98.0 0.00013 2.9E-09 76.4 15.1 144 70-222 80-284 (349)
61 cd08985 GH43_6 Glycosyl hydrol 97.9 0.00083 1.8E-08 68.2 19.0 144 61-226 65-215 (265)
62 COG2152 Predicted glycosylase 97.9 0.00012 2.6E-09 73.9 12.3 114 105-227 13-139 (314)
63 cd08989 GH43_XYL Glycosyl hydr 97.9 6E-05 1.3E-09 76.6 10.2 78 167-270 1-87 (269)
64 TIGR01322 scrB_fam sucrose-6-p 97.9 0.00011 2.4E-09 80.2 12.7 129 63-202 88-225 (445)
65 cd08988 GH43_ABN Glycosyl hydr 97.7 0.0015 3.2E-08 66.8 16.1 149 60-222 56-219 (279)
66 smart00640 Glyco_32 Glycosyl h 97.6 0.00027 5.8E-09 76.9 10.9 127 67-202 74-215 (437)
67 cd09003 GH43_AXH_1 Glycosyl hy 97.6 0.0033 7.1E-08 65.4 18.4 150 61-227 78-248 (311)
68 cd09001 GH43_XYL_2 Glycosyl hy 97.6 0.0017 3.7E-08 66.0 15.5 134 61-222 76-212 (269)
69 cd08980 GH43_1 Glycosyl hydrol 97.6 0.0035 7.5E-08 64.2 17.3 153 60-228 54-228 (288)
70 PF03664 Glyco_hydro_62: Glyco 97.5 0.013 2.8E-07 57.5 18.5 185 54-271 16-208 (271)
71 PF13088 BNR_2: BNR repeat-lik 97.3 0.012 2.5E-07 59.5 17.6 164 43-223 27-199 (275)
72 cd09000 GH43_XYL_1 Glycosyl hy 97.3 0.0089 1.9E-07 61.2 16.4 145 59-223 66-219 (288)
73 cd00260 Sialidase Sialidases o 96.9 0.039 8.5E-07 57.9 16.5 164 43-223 55-238 (351)
74 PF13088 BNR_2: BNR repeat-lik 96.7 0.23 4.9E-06 50.0 20.4 160 72-245 1-168 (275)
75 cd08982 GH43_3 Glycosyl hydrol 96.6 0.024 5.2E-07 58.5 12.5 139 56-202 86-240 (295)
76 PF00251 Glyco_hydro_32N: Glyc 96.4 0.054 1.2E-06 56.2 13.8 118 62-188 64-191 (308)
77 cd08987 GH62 Glycosyl hydrolas 96.1 0.21 4.5E-06 51.0 15.4 144 61-223 78-230 (303)
78 cd00260 Sialidase Sialidases o 94.5 6.7 0.00014 41.0 21.3 150 82-245 41-207 (351)
79 COG3507 XynB Beta-xylosidase [ 93.5 1.1 2.3E-05 49.4 12.9 146 56-218 86-243 (549)
80 PF13810 DUF4185: Domain of un 92.0 4.2 9.1E-05 42.4 14.6 150 63-223 96-272 (316)
81 PF13859 BNR_3: BNR repeat-lik 90.8 1.7 3.7E-05 45.1 10.3 142 63-225 62-214 (310)
82 COG3940 Predicted beta-xylosid 90.8 1.4 3E-05 42.8 8.6 102 67-171 137-247 (324)
83 COG1621 SacC Beta-fructosidase 88.5 9.9 0.00021 41.9 14.2 111 106-230 34-154 (486)
84 PF02435 Glyco_hydro_68: Levan 84.6 36 0.00077 36.9 15.6 124 71-203 143-320 (428)
85 COG3940 Predicted beta-xylosid 79.9 63 0.0014 31.6 16.4 197 62-282 14-224 (324)
86 KOG0228 Beta-fructofuranosidas 79.6 17 0.00038 39.8 10.9 136 97-248 46-197 (571)
87 PTZ00334 trans-sialidase; Prov 72.1 32 0.00068 40.2 11.2 88 120-225 263-351 (780)
88 PF13810 DUF4185: Domain of un 67.2 26 0.00057 36.5 8.6 93 126-224 103-210 (316)
89 PF03664 Glyco_hydro_62: Glyco 63.4 1.7E+02 0.0037 29.4 15.2 139 63-223 78-229 (271)
90 PF00337 Gal-bind_lectin: Gala 42.3 2.1E+02 0.0045 25.3 9.1 25 489-514 81-105 (133)
91 PF06905 FAIM1: Fas apoptotic 38.3 1.1E+02 0.0024 29.1 6.9 32 492-524 107-138 (177)
92 KOG0645 WD40 repeat protein [G 25.4 4.9E+02 0.011 26.7 9.2 48 103-153 66-117 (312)
93 PF06439 DUF1080: Domain of Un 24.7 3.6E+02 0.0077 24.8 8.0 56 489-548 126-184 (185)
94 smart00276 GLECT Galectin. Gal 23.4 4.6E+02 0.01 23.0 8.0 25 489-514 75-99 (128)
95 PF10916 DUF2712: Protein of u 22.2 81 0.0018 28.9 2.8 51 4-54 10-60 (146)
96 PF09601 DUF2459: Protein of u 20.5 48 0.001 31.4 1.1 18 66-83 133-151 (173)
No 1
>KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3e-105 Score=824.27 Aligned_cols=545 Identities=56% Similarity=0.999 Sum_probs=489.8
Q ss_pred ccchhHHHHHHHHhHhhhh-hhccccccCCccccccCCCCCCCCCCcccccccCCCCCccCCcceEEECCEEEEEEEEe-
Q 008686 4 SSICLFIFFALFLGHVFVK-LEASQHVYRTLQTCQSFSSSITSQPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYK- 81 (557)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~rp~yH~~p~~gw~nDPnG~~~~~G~YHlfyq~~- 81 (557)
+.|.|.....|++.| ++| +.|.-.++.-||.- + .++..+.++||.|||+|+.|||||| +|.+|+||||||||
T Consensus 7 ~~~~l~l~~~~~~~~-~vk~~da~~~~~~~l~~~-s-~~~~~n~~~Rp~~HFqP~k~wMN~P---~~ykG~yHLFyQyNP 80 (571)
T KOG0228|consen 7 CLVLLLLLVTLNLTN-YVKGLDAFHQNYAGLQSE-S-PSNTVNQPDRPGFHFQPPKGWMNDP---MYYKGKYHLFYQYNP 80 (571)
T ss_pred hHHHHHHHHHHhhhh-hhhhhhhhhhhhhhhccc-C-ccccccccCCceeecCCCcccccCc---cccCcEEEEEEecCC
Confidence 345566677788899 665 55666666666322 2 6778889999999999999999999 79999999999999
Q ss_pred ---cCCCeEEEEEEeCCCCcceecCCCCCCCCCcCCCceEeeeEEEccCCeEEEEEeeecCCCcceEEEEEEcCCCCCcc
Q 008686 82 ---LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYL 158 (557)
Q Consensus 82 ---~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~s~d~~d~~l 158 (557)
.||+.+||||+|+||+||+.+|+||.|+.++|..|||||||+++++|++.++|||.+....|+|.+|+..|.+||.|
T Consensus 81 ~gavwg~ivWGHavSkDLinW~~lp~Ai~Ps~~~ding~wSGSati~~~~~~vilytg~d~~~rqVqn~a~p~d~sdp~l 160 (571)
T KOG0228|consen 81 KGAVWGNIVWGHAVSKDLINWEALPPAIAPSEWFDINGCWSGSATIDPNNSPVILYTGIDPNNRQVQNYAYPKDVSDPQL 160 (571)
T ss_pred CCceeeeeEeeeecchhhccccccCcccCCCCccccCccccceEEEccCCCeEEEecccCcCceEEEEEeccCCCCchhh
Confidence 79999999999999999999999999999999999999999999999999999999988889999999999999999
Q ss_pred ceeecCCCCceEecC--CCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEEEEEeCCCCCCEEcccccccCCCCCce
Q 008686 159 KEWIKPPENPLMVPA--DQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSLYSTNQSGMW 236 (557)
Q Consensus 159 ~~w~k~~~~Pvi~~p--~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~~~ 236 (557)
+.|.|.+++|++.++ .+++...||||+++|++++|+|+|++|+..+.+|.+.+|+|.|+++|+..+.|++....++||
T Consensus 161 ~~w~k~~gnp~~~p~~V~~in~s~FRDPttaW~~~dgkWrm~vgsk~~q~g~a~~Y~S~Df~~W~k~~~~~h~~~~tgmw 240 (571)
T KOG0228|consen 161 IAWSKDGGNPFMKPDKVLGINSSQFRDPTTAWFGQDGKWRMTVGSKIKQRGKAIIYSSDDFKHWTKSSVPLHSGDLTGMW 240 (571)
T ss_pred heeecCCCceeeccccccCCChhhccCCceeeecCCCcEEEEEEeecCccceEEEEeccchhhhhcccccccccCccceE
Confidence 999999999999887 677788999999999999999999999998888999999999999999999889888889999
Q ss_pred eecceEEecCCCCCCeeecccCCceeEEEEEeecCCceeEEEEEEEecCCCeEeecCCccCCCCccccccCCCccceeee
Q 008686 237 ECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGKFYGSKTFF 316 (557)
Q Consensus 237 ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~~~~~~Y~vG~~d~~~~~F~~~~~~~~~~~~~~lD~G~fYA~qt~~ 316 (557)
||||||++..+|.+++.++-.+...|||+..|..+++..+|+||+||+.+.+|+|+..+.+.....+.|||.|||.|||.
T Consensus 241 ECPdffpVs~tg~~g~d~s~~~~~nkhvlkasl~gt~~d~Y~IG~yd~~~~~fvpd~~~~~~~~dlr~Dyg~~YASkTFf 320 (571)
T KOG0228|consen 241 ECPDFFPVSITGTDGLDWSLFGSINKHVLKASLGGTSNDQYFIGTYDGEKDTFVPDDGFSRVSVDLRYDYGKYYASKTFF 320 (571)
T ss_pred ECCCcEEecccCCCCceEEEeccccccccccccCCceeEEEEEecccCCcceeeccCCcccccccccccchhhhhhhhhc
Confidence 99999999998999998776666569999999988889999999999988899999876654344578999999999999
Q ss_pred eCCCCcEEEEEEecCCCCCCCCCCCCccccccccEEEEEec-cCCeEEecchHHHHhhhcCccccCCeEecCCceEEecc
Q 008686 317 DSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLWLDK-SGRQLMQWPISEIEKLRGNQVKWPAKLLERGSMVGITG 395 (557)
Q Consensus 317 d~~~gr~i~~gW~~~~~~~~~~~~~gW~g~ltlPReL~l~~-~g~~L~q~Pv~el~~LR~~~~~~~~~~~~~~~~~~l~~ 395 (557)
|..++|||+|||++++++..+..+.||+|+||+||+++|+. .|+.|.|.|++|++.||...+...+..++.+...++.+
T Consensus 321 ds~~~rrIlwgWa~es~~~~dd~~kgw~g~qtipRki~Ld~~s~k~l~qwpv~eie~Lr~~~v~~~~~~~~~g~~~~v~~ 400 (571)
T KOG0228|consen 321 DSVKGRRILWGWASESDYTNDDPTKGWRGLQTIPRKIWLDTESGKQLTQWPVEEIEPLRLSNVKMDNKLFKPGSLNEVSG 400 (571)
T ss_pred cccCCcEEEEEecccCcccccchhcccccccccceEEEeeccCCCcccccchheeecccccccCccccccCCceeEEecc
Confidence 99899999999999999988888999999999999999997 67899999999999999998877777788888888899
Q ss_pred cccceeEEEEEEEecccccccccccccCCCCccc------------ceEEEEEEcCCCceeEEEEEEEeeCCCceEEEEe
Q 008686 396 ITAAQADVEISFQTTAFEKAEVLDSIWTNPQFLC------------PFGLLVLASNGLQEYTAVFFRIFKGQDRHIVLMC 463 (557)
Q Consensus 396 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~------------~fgl~l~~s~d~~e~t~i~~d~~~~~~~~~~~~~ 463 (557)
+++.+.++|++|++.+.+.+.+++.+|.++...| +||+.++++.|.+|+|.++|.+.+......+++|
T Consensus 401 ~t~~q~dvev~f~~~~Leka~~~~~~~t~~~~~c~~~~~~v~~~~gpfgl~~la~~dl~eyt~v~f~i~k~~~~~~v~~c 480 (571)
T KOG0228|consen 401 ITAAQADVEVTFEVEDLEKAIVIEPSWTDPQFLCLTGGSSVREGLGPFGLMVLASSDLEEYTPVGFRIFKAKKKYVVLMC 480 (571)
T ss_pred cccccccceEEEEecccccccccCccccccceeeecCCcccccCCCcceEEEEeecCcccceeeeEEEeecCCcceeEEe
Confidence 9999999999999987777888888886443333 7999999999999999999999886656678899
Q ss_pred ecCCCCCCCCCCCCCcceeEEeecCCCCeEEEEEEEeCCeEEEEecCCceEEEEEeecCCCcCCceEEEEEecCceeEEE
Q 008686 464 SDQSRSSINDDNDKTSYGAFLDLDPVHEKLSIRSLIDRSIVESFGGGGKACITARIYPTLAIHDKAHLYAFNNGTEKVNI 543 (557)
Q Consensus 464 vDr~rS~~~~~~~~~~~~~~~~~~~~~~~~~LrIfvD~S~vEVFvNdG~~~lTsRiyp~~~~~~~~~i~~~~~g~~~~~~ 543 (557)
.|.+||++..+.+++.+++.+++.+ +++++||++||+|+||.|.|+|+.|+|+|+||..++.....+.+|++|.-.+.+
T Consensus 481 sd~~~sSl~~d~~k~~~~afvdv~~-~~~islr~LiDhsivEsyg~~G~t~iTsrvyp~~ai~~~~~lf~fn~g~~~v~v 559 (571)
T KOG0228|consen 481 SDQSRSSLAEDNYKPSIGAFVDVYP-HQKISLRSLIDHSIVESYGNGGKTVITSRVYPTLAIGEGAHLFVFNNGSQLVNV 559 (571)
T ss_pred ccCCCccccccccccceeeEEEecC-CCccchhhhhhhhhHHHhccCCcEEEEeeeeeeecccccceEEEecccccceEE
Confidence 9999999998889999999999876 899999999999999999999999999999999987777889999988878899
Q ss_pred EEEEeeccCccc
Q 008686 544 TSLRAWSMKKAQ 555 (557)
Q Consensus 544 ~~l~~w~m~~~~ 555 (557)
.++.+|+|++++
T Consensus 560 ~sl~aw~m~~~~ 571 (571)
T KOG0228|consen 560 TSLNAWSMKNAQ 571 (571)
T ss_pred EEeehhhcccCC
Confidence 999999999874
No 2
>COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.6e-97 Score=783.34 Aligned_cols=445 Identities=28% Similarity=0.530 Sum_probs=349.5
Q ss_pred CCCCCCcccccccCCCCCccCCcceEEECCEEEEEEEEe----cCCCeEEEEEEeCCCCcceecCCCCCCCCCcCCCceE
Q 008686 43 ITSQPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCW 118 (557)
Q Consensus 43 ~~~~~~rp~yH~~p~~gw~nDPnG~~~~~G~YHlfyq~~----~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d~~gv~ 118 (557)
...++|||.|||+||.||||||||++|++|+|||||||+ .||+||||||+|+|||||+++|+||.|+.++|.+|||
T Consensus 23 ~~~~~~Rp~yHftP~~G~mNDPNG~iy~~G~yHlFYQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~piaL~Pd~~~d~~g~y 102 (486)
T COG1621 23 VAKSPYRPQYHFTPPTGWLNDPNGLIYFDGKYHLFYQYNPFGAAHGPKHWGHAVSKDLVHWEHLPIALAPDDDYDSHGCY 102 (486)
T ss_pred ccCCCCCceeeecCCcCceECCCceeEECCEEEEEEecCCCCCCCCCceeeeeccCCcccceECCceecCCCccccCCce
Confidence 555899999999999999999999999999999999999 7899999999999999999999999999999999999
Q ss_pred eeeEEEccCCeEEEEEeeecC----CCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCe
Q 008686 119 SGSVTILPGGNPAVLYTGIDA----GNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKI 194 (557)
Q Consensus 119 SGsav~~~dg~~~l~YTg~~~----~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~ 194 (557)
|||||++ +|.+.+||||+.+ .+.+.||+|+|+|+ .+|+|+.++||+..|+++ +.|||||||+|+ ++++
T Consensus 103 SGSAV~~-~~~l~lfytg~v~~~~~~r~~~Q~iA~s~dg-----~~f~K~~~~~i~~~p~~~-t~hFRDPKv~w~-~~~~ 174 (486)
T COG1621 103 SGSAVVD-DGNLSLFYTGNVRDSNGIRQQTQCIAYSEDG-----GTFEKYSGNPIIDQPEGY-TPHFRDPKVVWD-EGGK 174 (486)
T ss_pred eeeEEEe-CCcEEEEEccceeccCCcceeEEEEEEEcCC-----CceEeccCCceecCCCcc-cccCCCCccccc-CCCc
Confidence 9999986 9999999999875 36789999999995 578887678888888886 899999998888 7889
Q ss_pred EEEEEeeec-CCccEEEEEEeCCCCCCEEccccccc-CCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeec--
Q 008686 195 WRVIIGSKI-NDTGLAILYRSKDFVNWTKAEQSLYS-TNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLS-- 270 (557)
Q Consensus 195 ~~m~~ga~~-~~~G~i~ly~S~Dl~~W~~~~~~~~~-~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~-- 270 (557)
|||++||+. +..|+|+||+|+||++|++.|++... ...++||||||||+|+ +.+.+.+ |++..+.+
T Consensus 175 ~~~mlgAq~~~~~g~i~lY~S~DL~~W~~~g~~~~~~~~~gym~ECPdlf~l~--~~~~~~~--------~pqg~~~~~~ 244 (486)
T COG1621 175 WWMMLGAQGEDLKGTILLYESDDLKNWQFTGEFGLEQGGLGYMWECPDLFELD--GEDVLLF--------WPQGLSINGG 244 (486)
T ss_pred EEEEEEEecCCCCceEEEEeCCCccCcEEEEeeccCCCceeeEEECCCeEEec--CcCceEE--------cceeeecCCC
Confidence 999999987 56899999999999999999976665 3457799999999999 5445444 44444443
Q ss_pred ---CCceeEEEEEEEecCCCeEeecCCccCCCCccccccCC-CccceeeeeCCCCcEEEEEEecCCCCC--CCCCCCCcc
Q 008686 271 ---NYQQDYYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGK-FYGSKTFFDSAKNRRILWGWINESSTR--SDNLKKGWA 344 (557)
Q Consensus 271 ---~~~~~~Y~vG~~d~~~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d~~~gr~i~~gW~~~~~~~--~~~~~~gW~ 344 (557)
+...++|++|+||+. +|.+... .+++||+|+ |||||||.++ +||||++|||++|++. .|+..++|+
T Consensus 245 ~~~n~~~~~Y~vG~~dg~--~f~~~~~-----~~~~LD~G~DfYApQtf~~~-dgrri~igWmg~w~~~~~~PT~~~~w~ 316 (486)
T COG1621 245 EYDNIYQSGYFVGDFDGK--EFKLDDG-----QFRELDFGFDFYAPQTFLDP-DGRRILIGWMGNWDYTNNYPTIDEGWR 316 (486)
T ss_pred cCCCcceeEEEEEeeccc--eeEecCC-----CceecccCccccceeeccCC-CCCEEEEEeccCccccCCCCccccCcC
Confidence 245689999999986 5665542 368999999 9999999985 7999999999999986 667678999
Q ss_pred ccccccEEEEEeccCCeEEecchHHHHhhhcCccccCCeEecCCceEEecccccceeEEEEEEEecccccccccccccCC
Q 008686 345 GLQATPRNLWLDKSGRQLMQWPISEIEKLRGNQVKWPAKLLERGSMVGITGITAAQADVEISFQTTAFEKAEVLDSIWTN 424 (557)
Q Consensus 345 g~ltlPReL~l~~~g~~L~q~Pv~el~~LR~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 424 (557)
|||||||||+|. +| +|+|+|++||++||.+...+.+..++.. ..+....+.++++++.+...
T Consensus 317 ~~mTlpRel~l~-~~-~L~Q~Pi~~l~~lr~~~~~~~~~~~~~~--~~l~~~~~~~~~l~~~~~~~-------------- 378 (486)
T COG1621 317 GAMTLPRELTLE-DG-KLYQTPVRELESLRKPEEAAHNTTLSGN--SKLELPSGDAYELDLDLIWT-------------- 378 (486)
T ss_pred ccceeeEEEEEc-CC-eEEecchHHHHhhhcccccccccccccc--eeeeccCCccEEEEEEeecc--------------
Confidence 999999999995 56 7999999999999999666666555544 22333334555554333211
Q ss_pred CCcccceEEEEEEcCCCceeEEEEEEEeeCCCceEEEEeecCCCCCCCCCCCCCcceeEEeecCC-CCeEEEEEEEeCCe
Q 008686 425 PQFLCPFGLLVLASNGLQEYTAVFFRIFKGQDRHIVLMCSDQSRSSINDDNDKTSYGAFLDLDPV-HEKLSIRSLIDRSI 503 (557)
Q Consensus 425 ~~~~~~fgl~l~~s~d~~e~t~i~~d~~~~~~~~~~~~~vDr~rS~~~~~~~~~~~~~~~~~~~~-~~~~~LrIfvD~S~ 503 (557)
..+.+|+.++.+.. .+.++.. +. .+++||++|. . .....+..+.+.+. ..+++||||+|+|+
T Consensus 379 --~~~~~~~~l~~~~~-----~~~~~~~---~~---~l~ldR~~s~-~---f~~~~~~~r~~~~~~~~~v~l~if~D~ss 441 (486)
T COG1621 379 --DATSFGLELRMGLN-----LVGYDVE---NE---TLTLDRSDSP-L---FTVQDGETRECFIENGAKVHLRIFVDNSS 441 (486)
T ss_pred --ccceEEEEeecCcc-----eeccccc---cc---eEEEeccccc-c---ccccCCceeeeccCCCceEEEEEEEeCCe
Confidence 12357888775432 3444432 12 2467999881 1 11122223333333 34489999999999
Q ss_pred EEEEecCCceEEEEEeecCCCcCCceEEEEEecCceeEEEEEEEeeccCc
Q 008686 504 VESFGGGGKACITARIYPTLAIHDKAHLYAFNNGTEKVNITSLRAWSMKK 553 (557)
Q Consensus 504 vEVFvNdG~~~lTsRiyp~~~~~~~~~i~~~~~g~~~~~~~~l~~w~m~~ 553 (557)
||||+|+|+.|+|+||||... ..+|.+.+... .+.+. .++|.+++
T Consensus 442 vEiF~NdGe~v~T~rifp~~~---~~~i~l~~~~g-~~~~~-~~~~~l~~ 486 (486)
T COG1621 442 VEIFINDGEKVFTSRIFPTPD---ANGISLYSDQG-VAVVQ-NTIWPLKS 486 (486)
T ss_pred EEEEEcCCceEEEEEecCCCc---ccceEEEccCc-eEEEE-eeeeccCC
Confidence 999999999999999999976 34444444433 23333 38898875
No 3
>TIGR01322 scrB_fam sucrose-6-phosphate hydrolase.
Probab=100.00 E-value=1.1e-88 Score=734.79 Aligned_cols=412 Identities=29% Similarity=0.540 Sum_probs=324.9
Q ss_pred CCCCCCcccccccCCCCCccCCcceEEECCEEEEEEEEe----cCCCeEEEEEEeCCCCcceecCCCCCCCCCcCCCceE
Q 008686 43 ITSQPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCW 118 (557)
Q Consensus 43 ~~~~~~rp~yH~~p~~gw~nDPnG~~~~~G~YHlfyq~~----~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d~~gv~ 118 (557)
..+++|||+|||+|+.||||||||++|++|+||||||++ .||+++||||+|+|||||+++|+||.|+..+|+.|||
T Consensus 8 ~~~~~~rp~~H~~p~~gw~nDPng~~~~~G~yHlfyq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~G~~ 87 (445)
T TIGR01322 8 ALQSEWRPTFHIQPQTGLLNDPNGLIYFKGEYHLFYQWFPFGPVHGLKSWGHYTSKDLVHWEDEGVALAPDDPYDSHGCY 87 (445)
T ss_pred hccCCcCccCccCCCcCCccCCCcceEECCEEEEEEccCCCCCccCceEEEEEECCCccccEECCccCcCCCcccCCceE
Confidence 456799999999999999999999999999999999998 6899999999999999999999999999999999999
Q ss_pred eeeEEEccCCeEEEEEeeecC----CCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCe
Q 008686 119 SGSVTILPGGNPAVLYTGIDA----GNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKI 194 (557)
Q Consensus 119 SGsav~~~dg~~~l~YTg~~~----~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~ 194 (557)
||||++. +|+++|||||+.+ .+.+.|++|+|+|+ .+|+|.. +|||.+++.....+||||+| |+ .+|+
T Consensus 88 sGsav~~-~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg-----~~~~k~~-~pvi~~~~~~~~~~fRDP~V-~~-~~g~ 158 (445)
T TIGR01322 88 SGSAVDN-NGQLTLMYTGNVRDSDWNRESYQCLATMDDD-----GHFEKFG-IVVIELPPAGYTAHFRDPKV-WK-HNGH 158 (445)
T ss_pred ECeEEee-CCEEEEEEeccccCCCCCeeEEEEEEEcCCC-----CeEEECC-CceEeCCCCCCcCcCCCCcE-Ee-ECCE
Confidence 9999974 9999999999753 24678999999885 5899974 59997654434679999996 55 4689
Q ss_pred EEEEEeeec-CCccEEEEEEeCCCCCCEEcccccccC-----CCCCceeecceEEecCCCCCCeeecccCCceeEEEEEe
Q 008686 195 WRVIIGSKI-NDTGLAILYRSKDFVNWTKAEQSLYST-----NQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVS 268 (557)
Q Consensus 195 ~~m~~ga~~-~~~G~i~ly~S~Dl~~W~~~~~~~~~~-----~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s 268 (557)
|||++|++. +..|++++|+|+||++|++.+.+.... ..+.|||||+||+|+ | ||||++|
T Consensus 159 ~~M~~g~~~~~~~g~i~ly~S~Dl~~W~~~g~~~~~~~~~~~~~g~~~ECPdlf~l~--~-------------k~vL~~s 223 (445)
T TIGR01322 159 WYMVIGAQTETEKGSILLYRSKDLKNWTFVGEILGDGQNGLDDRGYMWECPDLFSLD--G-------------QDVLLFS 223 (445)
T ss_pred EEEEEEEecCCCceEEEEEECCCcccCeEecccccccccccCCccceEECCeEEEEC--C-------------cEEEEEe
Confidence 999999986 457899999999999999998654332 245699999999998 5 7888877
Q ss_pred ecCC----------ceeEEEEEEEecCCCeEeecCCccCCCCccccccCC-CccceeeeeCCCCcEEEEEEecCCCCCCC
Q 008686 269 LSNY----------QQDYYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGK-FYGSKTFFDSAKNRRILWGWINESSTRSD 337 (557)
Q Consensus 269 ~~~~----------~~~~Y~vG~~d~~~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d~~~gr~i~~gW~~~~~~~~~ 337 (557)
..+. ..+.|++|+||..+.+|++++. ++.||+|+ |||||+|.++ +|||||||||++|+...+
T Consensus 224 ~~g~~~~~~~~~~~~~~~Y~vG~~d~~~~~f~~~~~------~~~lD~G~dfYA~qtf~~~-~gr~i~~gW~~~~~~~~~ 296 (445)
T TIGR01322 224 PQGLDASGYDYQNIYQNGYIVGQLDYEAPEFTHGTE------FHELDYGFDFYAPQTFLAP-DGRRILVAWMGLPEIDYP 296 (445)
T ss_pred ccccCcccccccccccceeEEEEEECCCCEEecCCC------CceeccCcCceeeeeEECC-CCCEEEEEeCCCCccCCC
Confidence 5431 2367999999987789987643 57899999 9999999986 699999999999987666
Q ss_pred CCCCCccccccccEEEEEeccCCeEEecchHHHHhhhcCccccCCeEecCCceEEecccccceeEEEEEEEecccccccc
Q 008686 338 NLKKGWAGLQATPRNLWLDKSGRQLMQWPISEIEKLRGNQVKWPAKLLERGSMVGITGITAAQADVEISFQTTAFEKAEV 417 (557)
Q Consensus 338 ~~~~gW~g~ltlPReL~l~~~g~~L~q~Pv~el~~LR~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~ 417 (557)
+.+.+|+|+|||||+|+|+ +| +|+|+|++|+++||..... ... ......+.... .+++|+++++..
T Consensus 297 ~~~~~W~g~lslpR~l~l~-~g-~L~~~Pv~el~~lr~~~~~---~~~-~~~~~~~~~~~-~~~~l~~~~~~~------- 362 (445)
T TIGR01322 297 TDRDGWAHCMTLPRELTLK-DG-KLVQTPLRELKALRTEEHI---NVF-GDQEHTLPGLN-GEFELILDLEKD------- 362 (445)
T ss_pred CccCCcccccccCEEEEEe-CC-eEEEEEhHHHHHHhcCccc---ccc-ccccccccCCC-ceEEEEEEecCC-------
Confidence 6678999999999999997 67 7999999999999986542 011 11111222221 244444443211
Q ss_pred cccccCCCCcccceEEEEEEcCCCceeEEEEEEEeeCCCceEEEEeecCCCCCCCCCCCCCcceeEEeecC-CCCeEEEE
Q 008686 418 LDSIWTNPQFLCPFGLLVLASNGLQEYTAVFFRIFKGQDRHIVLMCSDQSRSSINDDNDKTSYGAFLDLDP-VHEKLSIR 496 (557)
Q Consensus 418 ~~~~~~~~~~~~~fgl~l~~s~d~~e~t~i~~d~~~~~~~~~~~~~vDr~rS~~~~~~~~~~~~~~~~~~~-~~~~~~Lr 496 (557)
....+||.+ .+ .++.+.|.|+..+ +. +.+||++|+.... .+..+.+.+ .++.++||
T Consensus 363 ---------~~~~~~l~~-~~--~~~~~~i~~~~~~---~~---l~~dr~~~~~~~~-----~~~~~~~~~~~~~~~~l~ 419 (445)
T TIGR01322 363 ---------SAFELGLAL-TN--KGEETLLTIDADE---GK---VTLDRRSSGNLED-----YGGTRSCPLPNTKKVSLH 419 (445)
T ss_pred ---------CccEEEEEE-eC--CCCeEEEEEECcC---CE---EEEEccCCCCcCC-----ccceEEEEcCCCCeEEEE
Confidence 123588888 44 3467999998653 32 3569988863211 111222222 35789999
Q ss_pred EEEeCCeEEEEecCCceEEEEEeecC
Q 008686 497 SLIDRSIVESFGGGGKACITARIYPT 522 (557)
Q Consensus 497 IfvD~S~vEVFvNdG~~~lTsRiyp~ 522 (557)
||||+|+||||||||+.|||+||||.
T Consensus 420 i~vD~s~vEvFvn~G~~~~t~riyp~ 445 (445)
T TIGR01322 420 IFIDKSSVEIFINDGEEVMTSRIFPD 445 (445)
T ss_pred EEEECCEEEEEECCCEEEEEEeccCC
Confidence 99999999999999999999999994
No 4
>smart00640 Glyco_32 Glycosyl hydrolases family 32.
Probab=100.00 E-value=2.6e-84 Score=698.85 Aligned_cols=417 Identities=43% Similarity=0.767 Sum_probs=318.0
Q ss_pred cccCCCCCccCCcceEEECCEEEEEEEEe----cCCCeEEEEEEeCCCCcceecCCCCCCCCCcCCCceEeeeEEEccCC
Q 008686 53 HFQPPSSWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSVTILPGG 128 (557)
Q Consensus 53 H~~p~~gw~nDPnG~~~~~G~YHlfyq~~----~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d~~gv~SGsav~~~dg 128 (557)
||+|+.||||||||++|++|+||||||++ .||+++||||+|+|||||+++|+||.|+.++|++|||||||++. +|
T Consensus 1 H~~p~~gw~NDPnGl~~~~G~yHlFyq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~aL~P~~~~d~~g~~sGsav~~-~~ 79 (437)
T smart00640 1 HFQPPKGWMNDPNGLIYYKGKYHLFYQYNPFGPVWGNIHWGHAVSKDLVHWTHLPVALAPDEWYDSNGVFSGSAVID-PG 79 (437)
T ss_pred CCCCCcCccCCCCeeeEECCEEEEEEecCCCCCCCCCeEEEEEEcCCcceeeecCcccCCCCcCCCCcEEEEEEEEC-CC
Confidence 99999999999999999999999999999 68899999999999999999999999999999999999999986 78
Q ss_pred eEEEEEeeecCC------CcceE-EEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEee
Q 008686 129 NPAVLYTGIDAG------NKQVQ-NLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGS 201 (557)
Q Consensus 129 ~~~l~YTg~~~~------~~~~q-~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga 201 (557)
++++||||+... ..+.| +.|.++| +++|+|++.+||+.+++++...+||||+|+|. ++++|||++|+
T Consensus 80 ~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d-----~~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~~-~~~~~~m~~g~ 153 (437)
T smart00640 80 NLSLLYTGNVAIDTNVQVQRQAQQLAASDDL-----GGTWTKYPGNPVLVPPPGIGTEHFRDPKVFWY-DGDKWYMVIGA 153 (437)
T ss_pred ceEEEEcCCcccccccCcccEEEEEEEECCC-----CCeeEECCCCcEEeCCCCCCCCCcCCCCccEE-CCCEEEEEEEE
Confidence 899999998421 12333 4454444 38999987799998766666789999998776 44799999998
Q ss_pred ec-CCccEEEEEEeCCCCCCEEccccccc--CCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecCCceeEEE
Q 008686 202 KI-NDTGLAILYRSKDFVNWTKAEQSLYS--TNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYYT 278 (557)
Q Consensus 202 ~~-~~~G~i~ly~S~Dl~~W~~~~~~~~~--~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~~~~~~Y~ 278 (557)
+. +..|+|+||+|+||++|++.+.++.. ...++|||||+||+|+.+| .+.||||++|.++...+.|+
T Consensus 154 ~~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~g~~wECPdlf~l~~~~----------~~~~~vLi~s~~g~~~~~y~ 223 (437)
T smart00640 154 SDEDKTGIALLYRSTDLKNWTLLGELLHSGVGDTGGMWECPDLFPLPGDG----------DTSKHVLKVSPQGGSGNYYF 223 (437)
T ss_pred EecCCCeEEEEEECCCcccCeECCcccccCCCCccceEECCcEEEeCCCC----------CceeEEEEECcCCCCccEEE
Confidence 76 56799999999999999999865543 2345899999999998543 23599999999876778999
Q ss_pred EEEEecCCCeEeecCCccCCCCccccccCC-CccceeeeeCCCCcEEEEEEecCCCCC-CCCCCCCccccccccEEEEEe
Q 008686 279 IGTYNITTDTYIAEEGSFDDNSGLRYDYGK-FYGSKTFFDSAKNRRILWGWINESSTR-SDNLKKGWAGLQATPRNLWLD 356 (557)
Q Consensus 279 vG~~d~~~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d~~~gr~i~~gW~~~~~~~-~~~~~~gW~g~ltlPReL~l~ 356 (557)
+|.+++. .+|+|+.... ...+++||+|+ |||||+|.+++++|+||||||++|+.. ...+..+|+|+|||||||+|+
T Consensus 224 ~G~~~g~-~~f~~~~~~~-~~~~~~lD~G~dfYA~qt~~~~~~~r~i~~gW~~~~~~~~~~~p~~~W~g~~tlPRel~l~ 301 (437)
T smart00640 224 VGYFDGS-DQFTPDDPED-VGIGLRLDYGFDFYASQTFYDPDGNRRILIGWMGEWDSYADDVPTKGWAGALSLPRELTLD 301 (437)
T ss_pred EEEEcCc-eeEeECCccc-cCccceEecCCCceeeeeeecCCCCcEEEEEecCCCccccccCCCCCccccceeCeEEEEE
Confidence 9999863 4798875421 12345899998 999999998755699999999999742 222338999999999999995
Q ss_pred -ccCCeEEecchHHHHhhhcCccccCCeEecCCceEEec--ccccceeEEEEEEEecccccccccccccCCCCcccceEE
Q 008686 357 -KSGRQLMQWPISEIEKLRGNQVKWPAKLLERGSMVGIT--GITAAQADVEISFQTTAFEKAEVLDSIWTNPQFLCPFGL 433 (557)
Q Consensus 357 -~~g~~L~q~Pv~el~~LR~~~~~~~~~~~~~~~~~~l~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~fgl 433 (557)
++| +|+|+|++||++||... ......+..+....+. ...+.+++|+++++.... ...+|||
T Consensus 302 ~~~g-~L~~~Pv~el~~lr~~~-~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~--------------~~~~~~l 365 (437)
T smart00640 302 KTGG-KLLQWPVEELESLRNVK-ELSNLTLKPGSVNELLGLTASGDAYEIELSFEVDSG--------------GAGPFGL 365 (437)
T ss_pred ecCC-EEEEeecHHHHhhhCcc-cccceeecCCceeeeecccCCccEEEEEEEEEeCCC--------------cceeEEE
Confidence 566 79999999999999542 2222233222211221 123456677777654310 1125999
Q ss_pred EEEEcCCCceeEEEEEEEeeCCCceEEEEeecCCCCCCCCC-CCCCcceeEEeecCCCCeEEEEEEEeCCeEEEEecCC
Q 008686 434 LVLASNGLQEYTAVFFRIFKGQDRHIVLMCSDQSRSSINDD-NDKTSYGAFLDLDPVHEKLSIRSLIDRSIVESFGGGG 511 (557)
Q Consensus 434 ~l~~s~d~~e~t~i~~d~~~~~~~~~~~~~vDr~rS~~~~~-~~~~~~~~~~~~~~~~~~~~LrIfvD~S~vEVFvNdG 511 (557)
.+++++++++.+.|.|+... +. +.+||++++.... ........+.++. .+++++||||||+||||||+|||
T Consensus 366 ~~~~~~~~~~~~~i~~~~~~---~~---l~vdR~~~~~~~~~~~~~~~~~~~~~~-~~~~~~lri~vD~ssvEvf~ndG 437 (437)
T smart00640 366 LVLASEDLSEQTAVYFDVSK---GT---LCLDRRSSGTSNDEVFKGVRGATVPVD-PGETLSLRILVDHSSVEIFANGG 437 (437)
T ss_pred EEEeCCCCCceEEEEEEcCC---eE---EEEecCCCCCCcccccccceeeeeecC-CCCeEEEEEEEeceEEEEEeCCC
Confidence 99998888899999998643 32 4569977642110 0111111112222 34789999999999999999987
No 5
>PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure []. ; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A ....
Probab=100.00 E-value=2e-73 Score=588.50 Aligned_cols=295 Identities=39% Similarity=0.774 Sum_probs=244.2
Q ss_pred cccCCCCCccCCcceEEECCEEEEEEEEe----cCCCeEEEEEEeCCCCcceecCCCCCCCCCcCCCceEeeeEEEccCC
Q 008686 53 HFQPPSSWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSVTILPGG 128 (557)
Q Consensus 53 H~~p~~gw~nDPnG~~~~~G~YHlfyq~~----~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d~~gv~SGsav~~~dg 128 (557)
||+|+.||||||||++|++|+||||||++ .||+++||||+|+|||||+++|+||.|+..+|++|||||||++. ++
T Consensus 1 H~~p~~gw~NDPnG~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~~~aL~P~~~~d~~g~~SGs~~~~-~~ 79 (308)
T PF00251_consen 1 HFTPPKGWMNDPNGLVYYDGKYHLFYQYNPFGPEWGNMHWGHATSKDLVHWEHLPVALPPDEEYDADGCFSGSAVVD-DD 79 (308)
T ss_dssp SBB-SSEEEEEEEEEEEETTEEEEEEEEETTSSSS-SBEEEEEEESSSSSEEEEEEEE-SSSGGGTTEEEEEEEEEE-TT
T ss_pred CCCCCCCCeECCccCeEeCCEEEEEeccCCCCcccceeEEEEEECCCCCCceeCCceEcccccCCcCccCcceEEEE-CC
Confidence 99999999999999999999999999999 68999999999999999999999999999999999999999986 67
Q ss_pred eEEEEEeeecCCCcceEEEEEEcCCCCCccceeecCC-CCceEec-CCCCCCCCccCCeEEEecCCCeEEEEEeeecCCc
Q 008686 129 NPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPP-ENPLMVP-ADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDT 206 (557)
Q Consensus 129 ~~~l~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~-~~Pvi~~-p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~ 206 (557)
++++||||+.+...+.|++|+|.|.+ .+|+|++ .+|||.. |++ ...+||||+|+|. ++++|+|++|++....
T Consensus 80 ~~~~~YTg~~~~~~~~q~~A~s~d~~----~~w~k~~~~~pvi~~~p~~-~~~~~RDP~v~~~-~~~~~~m~~g~~~~~~ 153 (308)
T PF00251_consen 80 NLVLFYTGNNRDGKQVQCLAYSTDDG----ITWTKYPQGNPVIPEPPPG-DTTDFRDPKVFWR-EDGRWYMLLGAGRDGR 153 (308)
T ss_dssp CEEEEEEEEETTTEEEEEEEEESSTT----SSEEE-TTTCESBESSSTT-SCTSEEEEEEEEE-CTTEEEEEEEEEETTE
T ss_pred EEEEEEeccCCCCCeEEEEEEECCCC----CceEEcCCCCcEEEecccC-CCCccccCeEEEe-cCCEEEEEEeccccCc
Confidence 99999999987668999999996653 8999987 4999975 444 7899999998788 4699999999998888
Q ss_pred cEEEEEEeCCCCCCEEcccccccCC-CCCceeecceEEecCCCCCCeeecccCCceeEEEEEee----cCCceeEEEEEE
Q 008686 207 GLAILYRSKDFVNWTKAEQSLYSTN-QSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSL----SNYQQDYYTIGT 281 (557)
Q Consensus 207 G~i~ly~S~Dl~~W~~~~~~~~~~~-~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~----~~~~~~~Y~vG~ 281 (557)
|+|++|+|+||++|++.+.+..... .+.|||||+||+|+..|. .....+|||++|. .....+.|++|+
T Consensus 154 g~i~~y~S~Dl~~W~~~~~l~~~~~~~g~~~ECPdlf~l~~~~~-------~~~~~~~vl~~s~~g~~~~~~~~~Y~vG~ 226 (308)
T PF00251_consen 154 GCILLYTSDDLIHWEYLGPLFIPGDNGGGMWECPDLFPLDGKGD-------GTGKWVWVLIFSPQGIEDNGHGTYYMVGD 226 (308)
T ss_dssp EEEEEEEESSSSSEEEEEEESEEETTTSSEEEEEEEEEEEBTTS-------SSEEEEEEEEEEEESTTTTTTEEEEEEEE
T ss_pred ceEEEEEcCCcccCceeCcccccccccccccccceEEEECCccc-------ccceEEEEEEecccccccccccceEEeEE
Confidence 9999999999999999986555433 478999999999995421 0112367899998 345678999999
Q ss_pred EecCCCeEeecCCccCCCCccccccCC-CccceeeeeCCCCcEEEEEEecCCCCC-CCCCCCCccccccccEEEEEeccC
Q 008686 282 YNITTDTYIAEEGSFDDNSGLRYDYGK-FYGSKTFFDSAKNRRILWGWINESSTR-SDNLKKGWAGLQATPRNLWLDKSG 359 (557)
Q Consensus 282 ~d~~~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d~~~gr~i~~gW~~~~~~~-~~~~~~gW~g~ltlPReL~l~~~g 359 (557)
+|..+.+|+++.. .+++||+|+ |||+|+|.+++++|||+||||++++.. ....+.+|+|+|||||||+|++++
T Consensus 227 ~d~~~~~f~~~~~-----~~~~lD~G~dfYA~qtf~~~~~~r~i~~gW~~~~~~~~~~~~~~gW~g~lslPR~l~l~~~~ 301 (308)
T PF00251_consen 227 FDFDGGTFTPDDS-----SFQRLDYGFDFYAPQTFYDPDGGRRILIGWMGEWDYNADDYPTYGWAGCLSLPRELTLKDEG 301 (308)
T ss_dssp EETTTTEEEESST-----TSEESBSSSS-EEEEEEEETTTTEEEEEEEES-TTTHHHHCHGHTEE-EE---EEEEEETTS
T ss_pred ecCCCCeeeeecc-----ccceeccCccccCCchhcCCCcCcEEEEEEecCCCcccccCCCCCCccEEEeCEEEEEEECC
Confidence 9877789987621 368999999 999999999754599999999999864 223368999999999999997544
Q ss_pred CeEEecc
Q 008686 360 RQLMQWP 366 (557)
Q Consensus 360 ~~L~q~P 366 (557)
++|+|+|
T Consensus 302 ~~L~q~P 308 (308)
T PF00251_consen 302 GRLYQKP 308 (308)
T ss_dssp SSEEEEE
T ss_pred CeEEEcC
Confidence 5899998
No 6
>cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases. Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal
Probab=100.00 E-value=4.7e-65 Score=523.53 Aligned_cols=282 Identities=37% Similarity=0.733 Sum_probs=240.9
Q ss_pred CCccCCcceEEECCEEEEEEEEe----cCCCeEEEEEEeCCCCcceecCCCCCCCCCcCCCceEeeeEEEccCCeEEEEE
Q 008686 59 SWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLY 134 (557)
Q Consensus 59 gw~nDPnG~~~~~G~YHlfyq~~----~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~Y 134 (557)
||||||||++|++|+||||||++ .|++++||||+|+|||||+++++||.|+..+|..|||||||+++.+|+++|||
T Consensus 1 gw~nDPng~~~~~G~yhlfyq~~p~~~~~~~~~wgha~S~Dlv~W~~~~~al~p~~~~d~~g~~sGsav~~~~g~~~~~Y 80 (298)
T cd08996 1 GWMNDPNGLVYFNGKYHLFYQYNPFGPVWGNMHWGHATSKDLVHWEHLPVALAPDDPYDSGGCFSGSAVVDDNGKLVLFY 80 (298)
T ss_pred CCcccCCeeeEECCEEEEEEcCCCCCCCCCCcEEEEEEecCccceeECCcccCCCCcccCCeEEeCeEEEcCCCcEEEEE
Confidence 79999999999999999999999 67899999999999999999999999988899999999999986339999999
Q ss_pred eeecC---CCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeec-CCccEEE
Q 008686 135 TGIDA---GNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI-NDTGLAI 210 (557)
Q Consensus 135 Tg~~~---~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~-~~~G~i~ 210 (557)
||+.+ .+.+.|++|+|+|. +++|+|...+|++.++ .....+||||+|++. +|+|+|++|++. +..|+|.
T Consensus 81 Tg~~~~~~~~~~~~~lA~S~dd----g~~w~k~~~~~~~~~~-~~~~~~~RDP~V~~~--~g~~~m~~g~~~~~~~~~i~ 153 (298)
T cd08996 81 TGNVKLDGGRRQTQCLAYSTDD----GRTFTKYEGNPVIPPP-DGYTTHFRDPKVFWH--DGKWYMVLGAGTEDGTGRIL 153 (298)
T ss_pred eceeCCCCCceEEEEEEEEcCC----CCEEEECCCCceEcCC-CCCCCcccCCeEEeE--CCEEEEEEEEEecCCCcEEE
Confidence 99874 46789999999853 3899999888888633 335679999997655 489999999986 4578999
Q ss_pred EEEeCCCCCCEEccccc-ccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecCC------ceeEEEEEEEe
Q 008686 211 LYRSKDFVNWTKAEQSL-YSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNY------QQDYYTIGTYN 283 (557)
Q Consensus 211 ly~S~Dl~~W~~~~~~~-~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~~------~~~~Y~vG~~d 283 (557)
+|+|+||++|++.+.+. .....+.|||||+||+|+.. .||||++|.+.. ..+.|++|+++
T Consensus 154 ly~S~Dl~~W~~~~~~~~~~~~~~~~~EcP~l~~l~~~-------------~k~vL~~s~~~~~~~~~~~~~~y~~G~~~ 220 (298)
T cd08996 154 LYRSDDLKNWEYLGELLTSLGDFGYMWECPDLFPLDVE-------------GKWVLIFSPQGLEPEGNGSGTGYLVGDFD 220 (298)
T ss_pred EEECCCCCCCEEcceecccCCCccceEeCCcEEEECCC-------------CeEEEEECCCCCCCCCCccceEEEEEEEE
Confidence 99999999999987542 22345679999999999842 299999998643 45799999999
Q ss_pred cCCCeEeecCCccCCCCccccccCC-CccceeeeeCCCCcEEEEEEecCCCCCCCCCCCCccccccccEEEEEeccCCeE
Q 008686 284 ITTDTYIAEEGSFDDNSGLRYDYGK-FYGSKTFFDSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLWLDKSGRQL 362 (557)
Q Consensus 284 ~~~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d~~~gr~i~~gW~~~~~~~~~~~~~gW~g~ltlPReL~l~~~g~~L 362 (557)
+. .|+++. ...++||+|+ |||||+|.++ +||+|+||||++++...+..+.+|+|+|||||+|+|++++ +|
T Consensus 221 ~~--~~~~~~-----~~~~~lD~G~dfYA~q~~~~~-~~r~i~~gW~~~~~~~~~~~~~~w~g~ls~pr~l~l~~~~-~l 291 (298)
T cd08996 221 GT--TFTFDH-----TEFGELDYGFDFYAPQTFVDP-DGRRILIGWMGNWDYEYPTPEDGWAGCLTLPRELSLKDGG-RL 291 (298)
T ss_pred CC--CCeEec-----CCceEecCCCCeEeCceeeCC-CCCEEEEEEecCCCcCCCCCCCCceeeeEeCEEEEEccCC-EE
Confidence 75 565541 1267899998 9999999986 7999999999999987777789999999999999999765 89
Q ss_pred EecchHH
Q 008686 363 MQWPISE 369 (557)
Q Consensus 363 ~q~Pv~e 369 (557)
.|+|++|
T Consensus 292 ~~~P~~e 298 (298)
T cd08996 292 YQRPVRE 298 (298)
T ss_pred EEEeCCC
Confidence 9999976
No 7
>cd08995 GH32_Aec43_like Glycosyl hydrolase family 32. This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a
Probab=100.00 E-value=8e-54 Score=436.49 Aligned_cols=262 Identities=28% Similarity=0.485 Sum_probs=217.9
Q ss_pred cCCcceEEECCEEEEEEEEe----cC--CCeEEEEEEeCCCCcceecCCCCCCC-CCcCCCceEeeeEEEccCCeEEEEE
Q 008686 62 NDPNGPMIYKGIYHFFYQYK----LW--DTVVWGHSTSTDMVNWTPHDAAIYPS-QPFDANSCWSGSVTILPGGNPAVLY 134 (557)
Q Consensus 62 nDPnG~~~~~G~YHlfyq~~----~~--g~~~Wgha~S~DlvhW~~~~~aL~P~-~~~d~~gv~SGsav~~~dg~~~l~Y 134 (557)
.|| .++|++|+||||||++ .| ++++||||+|+||+||++++++|.|. ..++..|||||+|++. +|+++|||
T Consensus 1 ~d~-~~~~~~G~yhlfyq~~p~~~~~~~~~~~wgha~S~Dlv~W~~~~~al~~~~~~~d~~g~~sgs~~~~-~g~~~l~Y 78 (280)
T cd08995 1 GDP-MPFYDDGTFHIFYLHDPRNGPPEGLRHPWSLLTTKDLVNYEDHGEAIPRGGDEDDDDAIGTGSVIKG-EGTYHAFY 78 (280)
T ss_pred CCc-cceEECCEEEEEEEcCCCCCCcccCCceEEEEEccCcCccEECcceecCCCCcccccCceEeEEEee-CCEEEEEE
Confidence 488 6899999999999999 45 78999999999999999999999884 5678899999999985 89999999
Q ss_pred eeecCC--CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeec-----CCcc
Q 008686 135 TGIDAG--NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI-----NDTG 207 (557)
Q Consensus 135 Tg~~~~--~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~-----~~~G 207 (557)
||+... ..+.|++|+|+|+ ++|+|.+.+||+.+++++...+||||+|++.+.+|+|||++|++. +..|
T Consensus 79 Tg~~~~~~~~~~i~~A~S~D~-----~~w~k~~~~pv~~~~~~~~~~~~rDP~Vf~~~~~g~y~m~~g~~~~~~~~~~~g 153 (280)
T cd08995 79 TGHNLDGKPKQVVMHATSDDL-----ITWTKDPEFILIADGEGYEKNDWRDPFVFWNEEEGCYWMLLATRLLDGPYNRRG 153 (280)
T ss_pred EEECCCCCCcEEEEEEECCCC-----CccEECCCCeecCCccccccCCccCCcEEEcCCCCeEEEEEEeccCCCCCCCCe
Confidence 998652 4678999999874 799998778888755555567899999766544799999999875 3578
Q ss_pred EEEEEEeCCCCCCEEcccccccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecC-CceeEEEEEEEecCC
Q 008686 208 LAILYRSKDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSN-YQQDYYTIGTYNITT 286 (557)
Q Consensus 208 ~i~ly~S~Dl~~W~~~~~~~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~-~~~~~Y~vG~~d~~~ 286 (557)
+|.+|+|+||++|++.+ ++.....+.|||||++|+++ | +|||++|.+. .....|++|+.. .
T Consensus 154 ~i~~~~S~Dl~~W~~~~-~~~~~~~~~~~E~P~l~~~~--g-------------~~~L~~s~~~~~~~~~Y~~~~~~--~ 215 (280)
T cd08995 154 CIALFTSKDLKNWEYEE-PFYAPGLYFMPECPDLFKMG--D-------------WWYLVYSEFSENRKTHYRVSKSP--F 215 (280)
T ss_pred EEEEEEeCCcCcceecC-ceecCCCcceeecceEEEEC--C-------------EEEEEEEeccCCCcEEEEEeCCC--C
Confidence 99999999999999986 45544456799999999998 5 8999999753 345789999622 3
Q ss_pred CeEeecCCccCCCCccccccCC-CccceeeeeCCCCcEEEEEEecCCCCCCCCCCCCccccccccEEEEEeccC
Q 008686 287 DTYIAEEGSFDDNSGLRYDYGK-FYGSKTFFDSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLWLDKSG 359 (557)
Q Consensus 287 ~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d~~~gr~i~~gW~~~~~~~~~~~~~gW~g~ltlPReL~l~~~g 359 (557)
+.|.... ...|| |+ |||||+|.++ |||||||||++++...++.+.+|+|+|| ||+|.+.+||
T Consensus 216 g~~~~~~-------~~~~d-g~dfYA~~~~~~~--~r~i~~gw~~~~~~~~~~~~~~w~~~l~-~~~~~~~~~g 278 (280)
T cd08995 216 GPWRAPD-------DDTFD-GRAFYAAKTASDG--TRRFLFGWVPTKAGNDDDGNWEWGGNLV-VHELIQNEDG 278 (280)
T ss_pred CCeEcCC-------cCccC-cccccceeEEEeC--CeEEEEEEecCCCCcccccCCccceEEE-eeEEEECCCC
Confidence 4564322 23589 99 9999999985 8999999999998877777899999998 6888887777
No 8
>cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J. This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta
Probab=100.00 E-value=2.8e-37 Score=312.51 Aligned_cols=239 Identities=26% Similarity=0.367 Sum_probs=188.9
Q ss_pred cCCcceEEECCEEEEEEEEecCC-----CeEEEEEEeCCCCcceecCCCC--CCCCCcCCCceEeeeEEEccCCeEEEEE
Q 008686 62 NDPNGPMIYKGIYHFFYQYKLWD-----TVVWGHSTSTDMVNWTPHDAAI--YPSQPFDANSCWSGSVTILPGGNPAVLY 134 (557)
Q Consensus 62 nDPnG~~~~~G~YHlfyq~~~~g-----~~~Wgha~S~DlvhW~~~~~aL--~P~~~~d~~gv~SGsav~~~dg~~~l~Y 134 (557)
-||+.+. |+||||||++..+ ..+|+||+|+||+||++.+.+| .|...+|..+||+|+++...+|+++|||
T Consensus 7 ~~~~~~~---g~yhlfy~~~~~~~~~~~~~~~~~a~S~D~~~w~~~~~~l~~~~~~~~~~~~~~~p~v~~~~dg~~~~~Y 83 (276)
T cd08979 7 FNPAVVV---GKYHLFYLAAPRGGGDGNTSRIGAASSDDGTWWTRPPAPLPPGPPGSFDDGGVWTPSVVRDPDGTYRMFY 83 (276)
T ss_pred cCCceEe---eeEEEEEEccCcCcCCCCcceeEEEEcCCCCccEECCcCccCCCCCchhcCCeEcceEEEcCCCeEEEEE
Confidence 3665544 8999999999322 4678999999999999999887 5667789999999999986449999999
Q ss_pred eeecC--CCcceEEEEEEcCCCCCccceeecCCCCceE-----ecCCCCCCCCccCCeEEEecCCCeEEEEEeeec-CCc
Q 008686 135 TGIDA--GNKQVQNLAVPKNLSDPYLKEWIKPPENPLM-----VPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI-NDT 206 (557)
Q Consensus 135 Tg~~~--~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi-----~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~-~~~ 206 (557)
|+... ...+.+++|+|+|+ .+|+|.+.+|++ ..+......++|||+|++.+.+|+|+|+++++. +..
T Consensus 84 t~~~~~~~~~~~i~~A~S~D~-----~~w~~~~~~~~~~~~~~~~~~~~~~~~~~dP~v~~~~~~g~y~m~~~~~~~~~~ 158 (276)
T cd08979 84 TGYDRPKGAVQRIGLATSKDL-----IHWTKHGPNPVPRWYESGNPGPWDDHAWRDPAVVRDEEGGGWRMYYGARDADER 158 (276)
T ss_pred ecccCCCCCcceEEEEECCCC-----CceEECCCCcceeeeecCCCCCcccccccccEEEEECCCCEEEEEEEeEccCCC
Confidence 99873 46788999999984 789998766653 222333457899999766533389999999875 356
Q ss_pred cEEEEEEeCCCCCCEEccccc--ccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecC-CceeEEEEEEEe
Q 008686 207 GLAILYRSKDFVNWTKAEQSL--YSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSN-YQQDYYTIGTYN 283 (557)
Q Consensus 207 G~i~ly~S~Dl~~W~~~~~~~--~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~-~~~~~Y~vG~~d 283 (557)
++|.+|+|+|+.+|++.+.+. .......++|||++|+++ | +|+|+++... .....|.+|.++
T Consensus 159 ~~i~~a~S~D~~~W~~~~~~~~~~~~~~~~~~e~P~~~~~~--g-------------~~~l~~~~~~~~~~~~y~vg~~~ 223 (276)
T cd08979 159 GAIGLATSPDLIHWTPVPPPPGPRTGYDDGQLEVPQVVKID--G-------------RWYLLYSGRNEDAKTGYRVGTAL 223 (276)
T ss_pred cEEEEEECCCCCcceECCCCCCCCCcccCCcCccceEEEEC--C-------------EEEEEEEecCccCCccEEEEecc
Confidence 899999999999999987542 222346799999999998 5 8999998764 456789999876
Q ss_pred cCCCeEeecCCccCCCCccccccCC-CccceeeeeCCCCcEEEEEEecCC
Q 008686 284 ITTDTYIAEEGSFDDNSGLRYDYGK-FYGSKTFFDSAKNRRILWGWINES 332 (557)
Q Consensus 284 ~~~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d~~~gr~i~~gW~~~~ 332 (557)
.. .+.|.. ...+|.|. |||+|++.+.+++|++++|||+++
T Consensus 224 ~~--~~~~~~-------~~~~~~g~~~ya~~~~~~~~~~~~~~~gw~~~~ 264 (276)
T cd08979 224 FG--PGRPLT-------LAELLDRTDLYAARPVPDGEGGGVVLEGFVQFG 264 (276)
T ss_pred cC--Cccccc-------cccccCCCCceeEEeccccCCCcEEEEEEeecc
Confidence 53 455432 35799999 999999987546899999999987
No 9
>cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68. Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32
Probab=100.00 E-value=5e-35 Score=296.47 Aligned_cols=268 Identities=25% Similarity=0.377 Sum_probs=204.3
Q ss_pred cCCcceEEECCEEEEEEEEecC-CCeEEEEEEeCCCCcceecCCCCC----CCCCcCCCceEeeeEEEccCCeEEEEEee
Q 008686 62 NDPNGPMIYKGIYHFFYQYKLW-DTVVWGHSTSTDMVNWTPHDAAIY----PSQPFDANSCWSGSVTILPGGNPAVLYTG 136 (557)
Q Consensus 62 nDPnG~~~~~G~YHlfyq~~~~-g~~~Wgha~S~DlvhW~~~~~aL~----P~~~~d~~gv~SGsav~~~dg~~~l~YTg 136 (557)
|||+ +++++|+||||||++.+ +.++|+|++|+||+||++++.+|. |...++..++|+|+++...+|+++||||+
T Consensus 1 ~DP~-i~~~~g~yyl~~~~~~~~~~~~~~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~wap~v~~~~~g~~~l~yt~ 79 (286)
T cd08772 1 ADPN-LIKYNGTYYIFFSGDDKNGNPGIAHATSKDLVNWTDHPVALVWWARRGGPKDSGGIWAPSIVYIENGKFYLYYTD 79 (286)
T ss_pred CCCe-EEEECCEEEEEEEccCCCCCceEEEEECCCcCcceECCccchhhcccCCCCCCCcEecceEEEcCCCCEEEEEEe
Confidence 7999 89999999999999833 578999999999999999998874 66777888999999998744999999999
Q ss_pred ecC-CCcceEEEEEEcCCCCCccceeecCCCCceEec-CCCCCCCCccCCeEEEecCCCeEEEEEeeec-CCccEEEEEE
Q 008686 137 IDA-GNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVP-ADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI-NDTGLAILYR 213 (557)
Q Consensus 137 ~~~-~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~-p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~-~~~G~i~ly~ 213 (557)
... ...+.+++|+|+|.. ..|++...+|++.. +.......+|||+|+ .+++|+|||++++.. ...+.|.+++
T Consensus 80 ~~~~~~~~~i~~a~s~d~~----~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~-~d~dG~~y~~~~~~~~~~~~~i~~~~ 154 (286)
T cd08772 80 VSFTKNQQTIGVATAEDGN----GPWTDYIGGPVLPDNPPAADVSNFRDPFVF-EDDDGKWYLVFGSGDHHNFGGIFLYE 154 (286)
T ss_pred ecCCCCceeEEEEEcCCCC----CCCccccccccccCCCCccccccccCCeEE-EcCCCCEEEEEccccCCCCCeEEEEE
Confidence 863 356789999998863 35676555566542 223345689999965 435699999999865 3457899999
Q ss_pred eCCCCCCEEcccc--cccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecC------CceeEEEEEEEecC
Q 008686 214 SKDFVNWTKAEQS--LYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSN------YQQDYYTIGTYNIT 285 (557)
Q Consensus 214 S~Dl~~W~~~~~~--~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~------~~~~~Y~vG~~d~~ 285 (557)
|+|+.+|...+.+ ........++|||++|+++ | +|+|++|... .....|++++.+
T Consensus 155 s~d~~~w~~~~~~~~~~~~~~~~~~E~P~~~~~~--g-------------~~yL~~s~~~~~~~~~~y~~~~~~~~~~-- 217 (286)
T cd08772 155 SDDDTTWKKGSAELLISEGEGGKQIEGPGLLKKN--G-------------KYYLFYSINGTGRVDSTYSIGYARSESD-- 217 (286)
T ss_pred cCCCCCcccccceeeEeeccCCCceeccEEEEEC--C-------------EEEEEEEcCCCcCCCCCcceEEEEccCC--
Confidence 9999999876643 1223356799999999998 6 8999988754 345677887643
Q ss_pred CCeEeecCCcc-CCCCccccccCC-CccceeeeeCCCCcEEEEEEecCCCCCCCCCCCCccccccccEEEE
Q 008686 286 TDTYIAEEGSF-DDNSGLRYDYGK-FYGSKTFFDSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLW 354 (557)
Q Consensus 286 ~~~F~~~~~~~-~~~~~~~lD~G~-fYA~qt~~d~~~gr~i~~gW~~~~~~~~~~~~~gW~g~ltlPReL~ 354 (557)
.+.|.+..... ........|.+. +||+++|.++ +||++|++|+..+..... ...+|+++|+|||+|.
T Consensus 218 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~r~~~ 286 (286)
T cd08772 218 TGPYVPKSDTSGGLSLTGGNDGGVGPYHAAAFNDA-GGRVVLVYHAYNVQYADA-PTYGWGRSLAIPRLLW 286 (286)
T ss_pred CCCcccCCCCCCccccccccCCCCCCCccEEEECC-CCCEEEEEEeccCCcccc-ccCCCccccccccccC
Confidence 35676543110 000123467777 9999999987 799999999999875433 5679999999999873
No 10
>cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase. Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n
Probab=99.94 E-value=1.4e-24 Score=224.72 Aligned_cols=265 Identities=19% Similarity=0.244 Sum_probs=169.0
Q ss_pred CCcceEE-ECCEEE-EEEEEe--------cCCCeEEEEEEeCCCCcceecCCCCCCCCCcCCCceEeeeEEEccCCeEEE
Q 008686 63 DPNGPMI-YKGIYH-FFYQYK--------LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAV 132 (557)
Q Consensus 63 DPnG~~~-~~G~YH-lfyq~~--------~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l 132 (557)
|..|-+. ++| || +|+... .|+.+||+|++|+||+||++.+ +|.|+..+|.+|||||||++..||+++|
T Consensus 9 d~~g~~~~~~G-~~~vfaL~a~~~~~~~~rh~~~~wgh~~S~dlv~W~~~~-~l~p~~~~d~~g~wSGsa~~~~dg~~~l 86 (349)
T cd08997 9 DRDGEVASYNG-YEVIFALTADRNLDPDDRHGDARIGYFYSRAGGNWIDGG-KVFPDGLSPGSREWSGSATLDDDGTVQL 86 (349)
T ss_pred CCCCCEEEECC-EEEEEEEecCCCCCCCCCcCceEEEEEEeCCCCcccCCC-ccCCCCcccCCCeEcceEEEeCCCeEEE
Confidence 5555333 577 56 888877 3789999999999999999955 4678888999999999999865799999
Q ss_pred EEeeecC----CCcceEEEEEEcCCCC-CccceeecCCCCceEecC--------------CCCCCCCccCCeEEEecCCC
Q 008686 133 LYTGIDA----GNKQVQNLAVPKNLSD-PYLKEWIKPPENPLMVPA--------------DQIDPGSFRDPTTAWIGPDK 193 (557)
Q Consensus 133 ~YTg~~~----~~~~~q~lA~s~d~~d-~~l~~w~k~~~~Pvi~~p--------------~~~~~~~fRDP~V~~~~~~g 193 (557)
||||+.+ .+...|++|.+++... .-++.|++. .+++.++ +.....+||||+|+..+++|
T Consensus 87 fYTg~~~~~~~~~~~~Q~ia~a~~~~~~v~~~~~~~~--~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~d~~~G 164 (349)
T cd08997 87 FYTAVGRKGEPQPTFTQRLALARGTLSVVNLSGFEDH--HELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFEDPETG 164 (349)
T ss_pred EEeccccCCCCCCCceEEEEEEECCCcceEecccCcc--ceeeeCCCceEEeccccccccccCccCcccCCEEEecCCCC
Confidence 9999864 2457788887765420 001233332 2344321 12236789999965443379
Q ss_pred eEEEEEeeecC-C---------------------------ccEEEEE--EeCCCCCCEEcccccccCC-CCCceeecceE
Q 008686 194 IWRVIIGSKIN-D---------------------------TGLAILY--RSKDFVNWTKAEQSLYSTN-QSGMWECPDFF 242 (557)
Q Consensus 194 ~~~m~~ga~~~-~---------------------------~G~i~ly--~S~Dl~~W~~~~~~~~~~~-~~~~~ECPdlf 242 (557)
+|||++++... . .|+|.++ +|+|+.+|++.+ ||.... -...||||++|
T Consensus 165 ~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~dl~~W~~~~-PL~~a~~v~d~~E~P~v~ 243 (349)
T cd08997 165 KTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKNDDLTEWKLLP-PLLEANGVNDELERPHVV 243 (349)
T ss_pred cEEEEEEeccCCCCCccccccccccccccccccccccccccceEEEEEecCCCCCCcEEcC-ccccCCCcCCceEcceEE
Confidence 99999998762 2 3666666 567999999987 454332 24579999999
Q ss_pred EecCCCCCCeeecccCCceeEEEEEeecCC---------ceeEEEEEEEecCCCeEeecCCccCCCCccccc--cCCCcc
Q 008686 243 PVSTKSPKGVDTSVIGPNIKHVLKVSLSNY---------QQDYYTIGTYNITTDTYIAEEGSFDDNSGLRYD--YGKFYG 311 (557)
Q Consensus 243 ~l~~~g~~~~~~~~~~~~~~~vl~~s~~~~---------~~~~Y~vG~~d~~~~~F~~~~~~~~~~~~~~lD--~G~fYA 311 (557)
+++ | ||+|++|.... ....+++++ ...+.|.|-+. +...|- .-.-|.
T Consensus 244 ~~~--g-------------k~yL~~s~~~~~~~~~~~~~~~~~g~vsd--sl~GP~~~~n~-----sglvl~~p~~~~~~ 301 (349)
T cd08997 244 FHN--G-------------KYYLFTISHRSTFAPGLSGPDGLYGFVSD--SLRGPYKPLNG-----SGLVLGNPTDAPFQ 301 (349)
T ss_pred EEC--C-------------EEEEEEeCCcCccccccCCCCcEEEEEeC--CCCCCCccCCC-----CcceeCCCCCCccc
Confidence 998 6 89998885322 123444553 22345655321 011110 002333
Q ss_pred ceeeeeCCCCcEEEEEEecCCCCCCCCCCCCccccccccEEEEEecc
Q 008686 312 SKTFFDSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLWLDKS 358 (557)
Q Consensus 312 ~qt~~d~~~gr~i~~gW~~~~~~~~~~~~~gW~g~ltlPReL~l~~~ 358 (557)
+++..-.+ .-++...|.+..... ......|.++-.-.|.|+.|
T Consensus 302 ~ys~~~~p--~~lv~Sfid~~~~~~--~~~~~~gT~aPt~~l~~~gd 344 (349)
T cd08997 302 TYSWYVMP--NGLVTSFIDNVGFAD--GGSRFGGTLAPTLKLNLKGD 344 (349)
T ss_pred cceEEEEC--CCEEEEEecccCCcc--cccccCCeeCCeEEEEEcCC
Confidence 44443333 346667888776432 13456777865556666543
No 11
>cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins. This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f
Probab=99.85 E-value=2.6e-20 Score=190.87 Aligned_cols=174 Identities=20% Similarity=0.366 Sum_probs=134.8
Q ss_pred cCCcceEEECCEEEEEEEEec--------CCCeEEEEEEeCCC-Cccee-cCCCCCCCC-CcCCCceEeeeEEEccCCeE
Q 008686 62 NDPNGPMIYKGIYHFFYQYKL--------WDTVVWGHSTSTDM-VNWTP-HDAAIYPSQ-PFDANSCWSGSVTILPGGNP 130 (557)
Q Consensus 62 nDPnG~~~~~G~YHlfyq~~~--------~g~~~Wgha~S~Dl-vhW~~-~~~aL~P~~-~~d~~gv~SGsav~~~dg~~ 130 (557)
-+|. +++++|+|||||.... .+...+|+|+|+|+ -+|++ ..++|.|.. .||..+++.++++..++|++
T Consensus 81 ~~P~-vi~~~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~~g~w~~~~~pvl~~~~~~~~~~~~~~p~v~~~~~g~~ 159 (291)
T cd08994 81 HNPT-IKRFDGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSLDGPWKRSDQPILEPRPGGWDNLITSNPAVTRRPDGSY 159 (291)
T ss_pred cCCe-EEEECCEEEEEEEcccCCcccccCCCCceEEEEEeCCCCCCcEECCCceecCCCCccccccccCCCeEEeCCCCE
Confidence 4784 6788999999999862 23578999999994 69998 456777754 37888899999987558999
Q ss_pred EEEEeeecCC---CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecC---
Q 008686 131 AVLYTGIDAG---NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIN--- 204 (557)
Q Consensus 131 ~l~YTg~~~~---~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~--- 204 (557)
+|+|+|.... ..+.+++|+|+|.. .+|+|....|++ . + ....++|||+| |+ .+|+|||+++++..
T Consensus 160 ~m~y~g~~~~~~~~~~~~gla~s~d~~----g~~~~~~~~~v~-~-~-~~~~~~~dP~V-~~-~~g~yym~~~~~~~~~~ 230 (291)
T cd08994 160 LLVYKGGTYNPTKGNRKYGVAIADSPT----GPYTKVSGPPFI-E-P-GDNGNTEDPFV-WY-DKGQFHMIVKDMLGYVT 230 (291)
T ss_pred EEEEeccccCCCCCcEEEEEEEeCCCC----CCCEECCCCccc-c-C-CCCCceeCceE-EE-eCCEEEEEEeecccCcC
Confidence 9999998642 35778999998862 479997655665 2 2 23578999995 66 46999999998863
Q ss_pred -CccEEEEEEeCCCCCCEEcccccc----c--C---CCCCceeecceE-Eec
Q 008686 205 -DTGLAILYRSKDFVNWTKAEQSLY----S--T---NQSGMWECPDFF-PVS 245 (557)
Q Consensus 205 -~~G~i~ly~S~Dl~~W~~~~~~~~----~--~---~~~~~~ECPdlf-~l~ 245 (557)
..++|.+|+|+|+++|++.+.+++ . . ...+|||||++| +.+
T Consensus 231 ~~~~~i~~a~S~Dg~~W~~~~~~~~~~~~~~~~~~~~~~~~~erP~v~~~~~ 282 (291)
T cd08994 231 GEKGGGAYFRSKDGIHWKLAPGLAYSTTVEWTDGTTEDWGRLERPQVLLDED 282 (291)
T ss_pred CCCceEEEEECCCCCCceecCcceeeeeEEcCCCcccccccccCCEEEEcCC
Confidence 468999999999999999875532 1 1 136799999999 777
No 12
>cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.83 E-value=2.9e-19 Score=181.76 Aligned_cols=189 Identities=17% Similarity=0.254 Sum_probs=138.8
Q ss_pred CCCccCCcceEEECCEEEEEEEEec--CCCeEEEEEEeCCCCcceecCCCCCCC-CCcCCCceEeeeEEEccCCeEEEEE
Q 008686 58 SSWMNDPNGPMIYKGIYHFFYQYKL--WDTVVWGHSTSTDMVNWTPHDAAIYPS-QPFDANSCWSGSVTILPGGNPAVLY 134 (557)
Q Consensus 58 ~gw~nDPnG~~~~~G~YHlfyq~~~--~g~~~Wgha~S~DlvhW~~~~~aL~P~-~~~d~~gv~SGsav~~~dg~~~l~Y 134 (557)
.||++||+ +++++|+||||++... +....|.+++|+||+||+.++.+|.+. ..++..++|+++++.. +|+++|||
T Consensus 5 ~g~~~DP~-i~~~~g~yY~~~t~~~~~~~~~~~~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~wAP~v~~~-~g~yy~yy 82 (275)
T cd09004 5 PGWYADPE-IRIFGGTYYIYPTSDGAGGEQTPFDVFSSKDLVNWTKEGIILDMADVSWANRAAWAPSVIER-NGKYYFYF 82 (275)
T ss_pred CCCCCCCC-eEEECCEEEEEEeccCCCCCeeEEEEEECCCCCCceECcccccccCCcccCCCcCCCeEEEE-CCEEEEEE
Confidence 46899996 5788999999998762 235789999999999999999988764 4577789999999875 89999999
Q ss_pred eeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEEEE-E
Q 008686 135 TGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILY-R 213 (557)
Q Consensus 135 Tg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly-~ 213 (557)
|+. +.+++|+|++.. ..|++...+|++.+.. .....+||.| |.+++|+|||++++. +.+.++ .
T Consensus 83 s~~-----~~i~va~s~~p~----gp~~~~~~~p~~~~~~--~~~~~iDp~v-f~d~dG~~yl~~~~~----~~~~i~~l 146 (275)
T cd09004 83 SAN-----GGIGVAVADSPL----GPFKDALGKPLIDKFT--FGAQPIDPDV-FIDDDGQAYLYWGGW----GHCNVAKL 146 (275)
T ss_pred EcC-----CcEEEEEeCCCC----CCCCCCCCCccccCCc--CCCCccCCCe-EECCCCCEEEEEcCc----CCEEEEEE
Confidence 986 457899998763 4688744578875432 2357899996 454689999999864 223333 4
Q ss_pred eCCCCCCEEcccccccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecCCceeEEEEE
Q 008686 214 SKDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYYTIG 280 (557)
Q Consensus 214 S~Dl~~W~~~~~~~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~~~~~~Y~vG 280 (557)
|+|+.+|......+ ......+.|||.+|+.+ | +++|++|........|.++
T Consensus 147 ~~d~~~~~~~~~~~-~~~~~~~~EgP~i~k~~--G-------------~yyl~ys~~~~~~~~Y~~~ 197 (275)
T cd09004 147 NEDMISFDGERDGS-EITPKNYFEGPFMFKRN--G-------------IYYLMWSEGGWTDPDYHVA 197 (275)
T ss_pred CCCcccccCcceee-eccCCCceecceEEEEC--C-------------EEEEEEECCCCCCCCceEE
Confidence 68888886543221 12234589999999987 6 8888888754322334444
No 13
>cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function. This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.82 E-value=3.5e-19 Score=180.60 Aligned_cols=158 Identities=15% Similarity=0.221 Sum_probs=120.3
Q ss_pred CCcceEEECCEEEEEEEEe-cCCCeEEEEEEeCCCCcceecC-CCCCC--CCCcCCCceEeeeEEEccCCeEEEEEeeec
Q 008686 63 DPNGPMIYKGIYHFFYQYK-LWDTVVWGHSTSTDMVNWTPHD-AAIYP--SQPFDANSCWSGSVTILPGGNPAVLYTGID 138 (557)
Q Consensus 63 DPnG~~~~~G~YHlfyq~~-~~g~~~Wgha~S~DlvhW~~~~-~aL~P--~~~~d~~gv~SGsav~~~dg~~~l~YTg~~ 138 (557)
|| |+++++|+||||||.+ ..+.++|+||+|+|++||++.+ +.|.| +..++..+|++++++.. +|+++|+||+..
T Consensus 2 nP-~v~~~~G~y~l~y~~~~~~~~~~ig~A~S~Dg~~~~~~~~~~i~p~~~~~~~~~gv~dP~v~~~-~g~y~m~Yta~~ 79 (268)
T cd08993 2 NP-AVVYDNGEFYLLYRAAGNDGVIRLGLARSRDGLHFEIDPDPPVWPPPEDGFEEGGVEDPRIVKI-DDTYYITYAARP 79 (268)
T ss_pred cC-eEEEECCEEEEEEEEECCCCceEEEEEEECCCceEEECCcceEcCCCCCcccccCccCcEEEEE-CCEEEEEEEccC
Confidence 78 7999999999999987 3468999999999999999875 34666 56788899999999875 999999999986
Q ss_pred C-CCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEec-CCCeEEEEEeeec---CCccEEEEEE
Q 008686 139 A-GNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIG-PDKIWRVIIGSKI---NDTGLAILYR 213 (557)
Q Consensus 139 ~-~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~-~~g~~~m~~ga~~---~~~G~i~ly~ 213 (557)
. ...+++++|.|+|. .+|+|.. .+ +. + ..||+.+ |.+ .+|+|+|++.... +..+.|.+++
T Consensus 80 ~~~~~~~i~lA~S~D~-----~~W~~~~-~~-~~-~------~~~d~~~-~p~~~~g~y~m~~r~~~~~~~~~~~I~lA~ 144 (268)
T cd08993 80 NAPNGTRIGLATTKDF-----ITFERLG-TS-LV-P------NNRDGIL-FPEKINGKYVMLHRPFEYGGTSPPDMWLSF 144 (268)
T ss_pred CCCCCcEEEEEEeCCc-----ceEEEec-cc-CC-C------CCCCEEE-eeEEECCEEEEEEccccCCCCCCCcEEEEE
Confidence 3 35678999999884 7999963 21 11 1 2378874 532 4899999996542 2467899999
Q ss_pred eCCCCCCEEcccccccCCCCCceeec
Q 008686 214 SKDFVNWTKAEQSLYSTNQSGMWECP 239 (557)
Q Consensus 214 S~Dl~~W~~~~~~~~~~~~~~~~ECP 239 (557)
|+||.+|+..+ ++... ....||+-
T Consensus 145 S~Dl~~W~~~~-~~~~~-~~~~wd~~ 168 (268)
T cd08993 145 SPDLVHWGNHR-FVLSP-RPNHWEQL 168 (268)
T ss_pred CCCcCccCCCe-EEecC-CCCceeec
Confidence 99999999765 34332 22346543
No 14
>cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins. This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f
Probab=99.79 E-value=1.7e-17 Score=170.16 Aligned_cols=196 Identities=16% Similarity=0.162 Sum_probs=149.2
Q ss_pred ccccCCCCCccCCcceEEE-CCEEEEEEEEec-------C-CCeEEEEEEeCCCC-cceecCCCCCCC--CCcCCCceEe
Q 008686 52 YHFQPPSSWMNDPNGPMIY-KGIYHFFYQYKL-------W-DTVVWGHSTSTDMV-NWTPHDAAIYPS--QPFDANSCWS 119 (557)
Q Consensus 52 yH~~p~~gw~nDPnG~~~~-~G~YHlfyq~~~-------~-g~~~Wgha~S~Dlv-hW~~~~~aL~P~--~~~d~~gv~S 119 (557)
.+|..+..++.+|. ++.. +|+||||||... | ....|+||+|+|+. +|+..+++|.|+ ..||..++++
T Consensus 4 ~~~~~~~~~~w~~~-vi~~~~g~y~lfy~~~~~~~~~~~~~~~~~i~~A~S~~~~g~w~~~g~vl~~~~~~~wd~~~~~~ 82 (291)
T cd08994 4 SGLEDEDYSVWGGS-IIKGPDGKYHLFASRWPEGLGFHGWLPYSEIVHAVSDTPEGPYTFQEVVLPGRGGGYWDARTTHN 82 (291)
T ss_pred ceeeeCCeEEEecc-eEECCCCcEEEEEEEccCCCCCCcccccceEEEEEcCCCCCCcEEeeeEcCCCCCCcccCCCccC
Confidence 46788889999995 6665 589999999862 1 23569999999987 999999999887 4689999999
Q ss_pred eeEEEccCCeEEEEEeeecC-------CCcceEEEEEEcCCCCCccceeecCCCCceEec-CCCCCCCCccCCeEEEecC
Q 008686 120 GSVTILPGGNPAVLYTGIDA-------GNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVP-ADQIDPGSFRDPTTAWIGP 191 (557)
Q Consensus 120 Gsav~~~dg~~~l~YTg~~~-------~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~-p~~~~~~~fRDP~V~~~~~ 191 (557)
++++.. +|+++||||+... ...+.+++|+|++. +.+|++. .+||+.+ +.+++...+.||+|+ +.+
T Consensus 83 P~vi~~-~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~----~g~w~~~-~~pvl~~~~~~~~~~~~~~p~v~-~~~ 155 (291)
T cd08994 83 PTIKRF-DGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSL----DGPWKRS-DQPILEPRPGGWDNLITSNPAVT-RRP 155 (291)
T ss_pred CeEEEE-CCEEEEEEEcccCCcccccCCCCceEEEEEeCCC----CCCcEEC-CCceecCCCCccccccccCCCeE-EeC
Confidence 999875 8999999999753 23567888988764 2479987 5799964 344566778999964 534
Q ss_pred CCeEEEEEeeecC----CccEEEEEEeCCC-CCCEEccccc-ccCCCCCceeecceEEecCCCCCCeeecccCCceeEEE
Q 008686 192 DKIWRVIIGSKIN----DTGLAILYRSKDF-VNWTKAEQSL-YSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVL 265 (557)
Q Consensus 192 ~g~~~m~~ga~~~----~~G~i~ly~S~Dl-~~W~~~~~~~-~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl 265 (557)
+|+|+|++.+... ...++.++.|+|. ..|+..+.+. .........|=|.+|+-+ | +|+|
T Consensus 156 ~g~~~m~y~g~~~~~~~~~~~~gla~s~d~~g~~~~~~~~~v~~~~~~~~~~dP~V~~~~--g-------------~yym 220 (291)
T cd08994 156 DGSYLLVYKGGTYNPTKGNRKYGVAIADSPTGPYTKVSGPPFIEPGDNGNTEDPFVWYDK--G-------------QFHM 220 (291)
T ss_pred CCCEEEEEeccccCCCCCcEEEEEEEeCCCCCCCEECCCCccccCCCCCceeCceEEEeC--C-------------EEEE
Confidence 8999999977641 2457889999988 6899876433 212234568899999976 5 7777
Q ss_pred EEeec
Q 008686 266 KVSLS 270 (557)
Q Consensus 266 ~~s~~ 270 (557)
+++..
T Consensus 221 ~~~~~ 225 (291)
T cd08994 221 IVKDM 225 (291)
T ss_pred EEeec
Confidence 77653
No 15
>cd08984 GH43_5 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.79 E-value=6e-18 Score=173.94 Aligned_cols=158 Identities=20% Similarity=0.286 Sum_probs=120.9
Q ss_pred ccCCcceEEECCEEEEEEEEec------CCCeEEEEEEeCCCCcceecCCCCCCCCCcCCCceEeeeEEEccCCeEEEEE
Q 008686 61 MNDPNGPMIYKGIYHFFYQYKL------WDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLY 134 (557)
Q Consensus 61 ~nDPnG~~~~~G~YHlfyq~~~------~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~Y 134 (557)
+.+|. +++++|+||||||++. ++.++|+||+|+||++|++.++++.+ ..++++++++...+|+++|||
T Consensus 79 ~WAP~-v~~~~G~y~myys~~~~~~~~~~~~~~i~~a~S~Dl~~w~~~~~~~~~-----~~~~iD~~vf~~~dg~~yl~y 152 (294)
T cd08984 79 FWAPE-VVWHGGVYHMYVTYIPGVPPDWGGPRRIVHYTSPNLWDWTFVGRVDLD-----SDRVIDACVFKLPDGRWRMWY 152 (294)
T ss_pred eeCce-EEEECCEEEEEEEecCCCCcccCCCcEEEEEECCCcCcceECCccccC-----CCCcEEeEEEEeCCCEEEEEE
Confidence 46785 7889999999999872 34789999999999999998875322 357899999986569999999
Q ss_pred eeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEEEEEe
Q 008686 135 TGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRS 214 (557)
Q Consensus 135 Tg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly~S 214 (557)
|+.. ....+++|.|+|. .+|++. .+++.. ...++|+| |+ .+|+|||+++. ..| +.+|+|
T Consensus 153 ~~~~--~~~~~~~a~s~D~-----~~w~~~--~~~i~~------~~~EgP~v-~k-~~g~yym~~~~---~~g-~~~~~S 211 (294)
T cd08984 153 KDER--RGSTTYAADSEDL-----YHWTVE--GPVLGD------RPHEGPNV-FR-WKGYYWMIIDE---WKG-LGVYRS 211 (294)
T ss_pred ECCC--CCeEEEEEECCCC-----CEEEeC--CccccC------CCCCCCCe-eE-ECCEEEEEEcC---Cce-EEEEEC
Confidence 9864 3455688988874 789984 456542 12389996 45 47899999854 234 679999
Q ss_pred CCCCCCEEcccccccCC----CCCceeecceEEec
Q 008686 215 KDFVNWTKAEQSLYSTN----QSGMWECPDFFPVS 245 (557)
Q Consensus 215 ~Dl~~W~~~~~~~~~~~----~~~~~ECPdlf~l~ 245 (557)
+|+.+|++.+.++.... ...+.+||++|+.+
T Consensus 212 ~D~~~W~~~~~~l~~~~~~~~~~~~~~H~~i~~~~ 246 (294)
T cd08984 212 KDAENWERQGGILLKPGTRPDDGAKGRHADVVVTG 246 (294)
T ss_pred CChhhcEECCeeeccCCCCccccccccCCcEEEeC
Confidence 99999999987665321 24478999999876
No 16
>cd08999 GH43_ABN_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=99.78 E-value=2e-17 Score=168.90 Aligned_cols=186 Identities=20% Similarity=0.216 Sum_probs=133.3
Q ss_pred CCccCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCCCCCC-cCCCceEeeeEEEccCCeEEEEEeee
Q 008686 59 SWMNDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQP-FDANSCWSGSVTILPGGNPAVLYTGI 137 (557)
Q Consensus 59 gw~nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~-~d~~gv~SGsav~~~dg~~~l~YTg~ 137 (557)
+.+-||. +++++|+|+||+.... ..+|.+++|+||+||+.++.+|.+... ++..++|.+.++.. +|+++|+|++.
T Consensus 6 ~~~~DP~-i~~~~g~yy~~~t~~~--~~~i~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~waP~v~~~-~g~y~~~y~~~ 81 (287)
T cd08999 6 GDFPDPS-VIRVDGTYYAYATNGN--GPNVPIATSTDLVNWTYLGDAFPKLPRWWTGGDFWAPDVSYV-NGKYVLYYSAR 81 (287)
T ss_pred CCCCCCe-EEEECCEEEEEEeCCC--CCcEEEEECCCCCCcEECCcccCCCCCcccCCCccCceEEEE-CCEEEEEEEee
Confidence 4567994 7788999999998653 378999999999999999988877665 45567899988875 89999999998
Q ss_pred cCC-CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCcc---EEEEEE
Q 008686 138 DAG-NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTG---LAILYR 213 (557)
Q Consensus 138 ~~~-~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G---~i~ly~ 213 (557)
... ..+.+++|+|+|.. ..|++... +++..+. .....+||.|+ .+++|++||++++.....| .+.+.+
T Consensus 82 ~~~~~~~~i~~a~s~~p~----g~~~~~~~-~~~~~~~--~~~~~~Dp~v~-~d~dG~~Yl~~~~~~~~~~~~~~i~~~~ 153 (287)
T cd08999 82 DKGSGGQCIGVATADSPL----GPFTDHGK-PPLCCPE--GEGGAIDPSFF-TDTDGKRYLVWKSDGNSIGKPTPIYLQE 153 (287)
T ss_pred cCCCCCEEEEEEECCCCC----CCCccCCc-ceEecCC--CCCCccCCCeE-ECCCCCEEEEEeccCCCCCCCceEEEEE
Confidence 652 45667888887753 46887643 3343222 23567999964 5468999999987542211 244443
Q ss_pred -eCCCCCCEEcccccccC---CCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecC
Q 008686 214 -SKDFVNWTKAEQSLYST---NQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSN 271 (557)
Q Consensus 214 -S~Dl~~W~~~~~~~~~~---~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~ 271 (557)
|+|+.+|......+... ....++|||.+|+.+ | +++|++|...
T Consensus 154 ls~d~~~~~~~~~~i~~~~~~~~~~~~EgP~i~k~~--g-------------~yyl~~S~~~ 200 (287)
T cd08999 154 LSADGLTLTGEPVRLLRNDEDWEGPLVEAPYLVKRG--G-------------YYYLFYSAGG 200 (287)
T ss_pred eCCCCccccCCcEeeecccccccCCceEeeEEEEEC--C-------------EEEEEEEcCC
Confidence 68888886443222211 134689999999997 6 8999988743
No 17
>cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of
Probab=99.72 E-value=2.8e-16 Score=159.77 Aligned_cols=191 Identities=16% Similarity=0.213 Sum_probs=138.1
Q ss_pred CCcceEEECCEEEEEEEEecCC-------CeEEEEEEeCCCCcceecCCCCCCCC--CcCCCceEeeeEEEccCCeEEEE
Q 008686 63 DPNGPMIYKGIYHFFYQYKLWD-------TVVWGHSTSTDMVNWTPHDAAIYPSQ--PFDANSCWSGSVTILPGGNPAVL 133 (557)
Q Consensus 63 DPnG~~~~~G~YHlfyq~~~~g-------~~~Wgha~S~DlvhW~~~~~aL~P~~--~~d~~gv~SGsav~~~dg~~~l~ 133 (557)
|| .++.++|+||||.....++ ...|..++|+||+||+..+.+|.+.. .|+..++|.++++.. +|++|||
T Consensus 2 DP-~~~~~~~~yy~~~t~~~~~~~~~~~~~~~~~v~~S~Dl~~W~~~g~~l~~~~~~~~~~~~~wAP~i~~~-~g~yy~y 79 (274)
T cd08990 2 DP-AAHVFNGRVYIYTSHDEAGGGGDDFCMNDYHVFSSPDLVNWTDHGVILSVTDFPAWAKGQAWAPDVVEK-NGKYYLY 79 (274)
T ss_pred CC-CcEEECCEEEEEeCCCCCCCCCCccccceEEEEECCCCCCcEECcccccCCCCCccccCCcCcCeEEEE-CCEEEEE
Confidence 89 5778899999999887322 24589999999999999999887543 377889999999875 8999999
Q ss_pred EeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEEEEE
Q 008686 134 YTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYR 213 (557)
Q Consensus 134 YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly~ 213 (557)
|++......+.+++|+|++.. ..|++....|++...+ ......||.+ +.+++|++||++++. .+....-.
T Consensus 80 y~~~~~~~~~~igva~s~~p~----Gpw~~~~~~~~~~~~~--~~~~~iDp~v-f~d~dG~~yl~~~~~---~~~~~~~l 149 (274)
T cd08990 80 FPARDKDGGFAIGVAVSDSPA----GPFKDAGGPILITTPS--GGWYSIDPAV-FIDDDGQAYLYWGGG---LGLRVAKL 149 (274)
T ss_pred EEeecCCCceEEEEEEeCCCC----CCCCCCCCccccccCC--CCCCccCCcE-EECCCCCEEEEECCc---CCEEEEEe
Confidence 998754345678899998753 4688865445554221 2356789995 454689999999864 23333345
Q ss_pred eCCCCCCEEccccccc-----CCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecCCceeEEEEE
Q 008686 214 SKDFVNWTKAEQSLYS-----TNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYYTIG 280 (557)
Q Consensus 214 S~Dl~~W~~~~~~~~~-----~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~~~~~~Y~vG 280 (557)
|+|+.+|+.....+.. .......|+|.+|+.+ | +++|++|........|.+.
T Consensus 150 ~~d~~~~~~~~~~i~~~~~~~~~~~~~~EgP~i~k~~--G-------------~YYl~yS~~~~~~~~~a~s 206 (274)
T cd08990 150 KPDMLSLKGEPVEIVITDGAGDELRRFFEAPWVHKRN--G-------------TYYLSYSTGDPEEIAYATS 206 (274)
T ss_pred CccccccCCCcEEEEeccccCCCCCCcccceeEEEEC--C-------------EEEEEEECCCCcEEEEEEc
Confidence 7799999754433321 1234578999999987 6 8999998765445556554
No 18
>cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F. This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma
Probab=99.69 E-value=1.8e-15 Score=152.45 Aligned_cols=191 Identities=21% Similarity=0.209 Sum_probs=132.0
Q ss_pred CCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCC----CCCCcCCCceEeeeEEEccCCeEEEEEeeec
Q 008686 63 DPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIY----PSQPFDANSCWSGSVTILPGGNPAVLYTGID 138 (557)
Q Consensus 63 DPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~----P~~~~d~~gv~SGsav~~~dg~~~l~YTg~~ 138 (557)
|| .++.++|+||||+....+....+..++|+||++|+..+.+|. +....+..++|+++++.. +|+++|+|++..
T Consensus 2 DP-~v~~~~~~yyl~~t~~~~~~~~i~i~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~waP~v~~~-~g~yyl~y~~~~ 79 (271)
T cd08978 2 DP-YILRYNGKYYLYGSTDDAAGPGVQVWSSKDLVNWRYEGAVFVAWRGRGEAKDSGGLWAPEVIYY-EGKYYLYYSVSD 79 (271)
T ss_pred CC-cEEEECCEEEEEEecCCcCCCcEEEEECCccCCcEECCcccccccccCCcccCCceeCCeEEEE-CCEEEEEEEccc
Confidence 89 578899999999997633345789999999999999998875 444556678999999875 899999999975
Q ss_pred CC-CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecC--CccEEEEEEeC
Q 008686 139 AG-NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIN--DTGLAILYRSK 215 (557)
Q Consensus 139 ~~-~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~--~~G~i~ly~S~ 215 (557)
.. ..+.+++|+|+|. ..|.+... ...+. ......+||.|+ .+++|++||++++... ..+.|.+++++
T Consensus 80 ~~~~~~~i~~a~s~d~-----~g~~~~~~---~~~~~-~~~~~~iDp~vf-~d~dg~~yl~~~~~~~~~~~~~i~~~~l~ 149 (271)
T cd08978 80 FDYNGSGIGVATSEDP-----TGPFEDKV---IRPPT-SNNGNSIDPTVF-KDDDGKYYLYYGSGDPGAGFGGIYISELT 149 (271)
T ss_pred CCCCcccEEEEECCCC-----CCCccccc---cCcCc-cCCCCccCcceE-EcCCCCEEEEEecccCCCCCCcEEEEEEC
Confidence 32 3567888998875 34544321 11111 123467999965 4466999999987642 34678888887
Q ss_pred CCCCCEEccccc--ccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecCCceeEEEEE
Q 008686 216 DFVNWTKAEQSL--YSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYYTIG 280 (557)
Q Consensus 216 Dl~~W~~~~~~~--~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~~~~~~Y~vG 280 (557)
+...|......+ .......+.|+|.+|+.+ | +|+|++|........|.++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~EgP~~~k~~--g-------------~yyl~ys~~~~~~~~y~~~ 201 (271)
T cd08978 150 DDLTKPTGPPVLSASSGNNNAVTEGPTIFKKN--G-------------YYYLTYSANGTGDYGYNIG 201 (271)
T ss_pred cccccccCCceeeeeeccCCCceEccEEEEEC--C-------------EEEEEEEeCCCCCCCceEE
Confidence 755443211111 112245689999999987 6 8899888754322345454
No 19
>cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.65 E-value=1.1e-14 Score=149.45 Aligned_cols=180 Identities=15% Similarity=0.134 Sum_probs=126.5
Q ss_pred CCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCCCCC-CcCCCceEeeeEEEccCCeEEEEEeeecCC-
Q 008686 63 DPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQ-PFDANSCWSGSVTILPGGNPAVLYTGIDAG- 140 (557)
Q Consensus 63 DPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~P~~-~~d~~gv~SGsav~~~dg~~~l~YTg~~~~- 140 (557)
||. +++++|+|+||+..... ...+.+++|+||+||+.++.++.+.. .|+..++|.++++.. +|+++|+|++....
T Consensus 2 DP~-v~~~~g~yyl~~t~~~~-~~~i~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~waP~v~~~-~g~yyl~ys~~~~~~ 78 (294)
T cd08991 2 DPF-VLRYNGKYYAYGTGGAD-GRGFAVYSSPDLVDWKLHGGALLALDDDWGRRGFWAPEVYYY-NGKFYMYYSANDRDE 78 (294)
T ss_pred CCe-EEEECCEEEEEEeCCCC-CCeeEEEECCCCCCceECCccccCCCCCccCCcEEccEEEEE-CCEEEEEEEeccCCC
Confidence 894 78899999999876522 24688999999999999998887655 478889999999875 89999999998643
Q ss_pred CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCC---ccEEEEEEeCCC
Q 008686 141 NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIND---TGLAILYRSKDF 217 (557)
Q Consensus 141 ~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~---~G~i~ly~S~Dl 217 (557)
..+.+++|+|+|.. ..|++... +.+.. .....||.++ .+++|+|||+++..... .+....-.|.|+
T Consensus 79 ~~~~i~~a~s~~p~----gp~~~~~~-~~~~~-----~~~~iD~~vf-~d~dG~~yl~~~~~~~~~~~~~i~~~~l~~d~ 147 (294)
T cd08991 79 KTEHIGVAVSDSPL----GPFRDIKK-PPIDF-----EPKSIDAHPF-IDDDGKPYLYYSRNNYGNRVSDIYGTELVDDK 147 (294)
T ss_pred CcceEEEEEeCCCC----CCCCcCCC-CcccC-----CCcccCCceE-ECCCCCEEEEEEecCCCCcccceEEEEEccce
Confidence 45778899998753 46776432 22221 1346799965 44679999999865422 234444457888
Q ss_pred CCCEEccc----cccc--------------CCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecC
Q 008686 218 VNWTKAEQ----SLYS--------------TNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSN 271 (557)
Q Consensus 218 ~~W~~~~~----~~~~--------------~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~ 271 (557)
.+|..... +... .....+.|+|.+++.+ | +|+|++|...
T Consensus 148 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~~k~~--g-------------~yyl~ys~~~ 204 (294)
T cd08991 148 LSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTVLKHN--G-------------RYYLTYSANH 204 (294)
T ss_pred eeeccceeeccccccccccccccccccccccccCceeeCcEEEEEC--C-------------EEEEEEECCC
Confidence 77752111 1111 0123479999999997 5 8899888643
No 20
>cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins. This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.63 E-value=1.3e-14 Score=150.51 Aligned_cols=167 Identities=19% Similarity=0.265 Sum_probs=122.6
Q ss_pred cccccccCCCCC-ccCCcceEEECCEEEEEEEEe-----------------cCCCeEEEEEEeCCCCcceecCCCCCCC-
Q 008686 49 RTGYHFQPPSSW-MNDPNGPMIYKGIYHFFYQYK-----------------LWDTVVWGHSTSTDMVNWTPHDAAIYPS- 109 (557)
Q Consensus 49 rp~yH~~p~~gw-~nDPnG~~~~~G~YHlfyq~~-----------------~~g~~~Wgha~S~DlvhW~~~~~aL~P~- 109 (557)
.|..=+.+..+. ..||..+++.+|+|||||+.. +|....++||+|+||+||++++++|.+.
T Consensus 24 ~p~~~~~~e~~i~r~dP~~Vi~~~g~Y~mwYs~~~~~~~~~~~~~~~~~~~~w~~y~I~~A~S~Dgv~W~~~g~~L~~~~ 103 (349)
T cd08992 24 YPKGGLGYEEGVHRRDPSSVIKVDGLYHVWYTKSEGETDGFGTGDPEAKVFPWDKCEIWHATSKDGWTWKEEGPAIGRGE 103 (349)
T ss_pred CcccccccccCeecCCCceEEEECCEEEEEEEecCCcccccccCCccccccCCCceEEEEEECCCCCCceECCccccCCC
Confidence 344444444443 459988999999999999964 1245778999999999999999888654
Q ss_pred -CCcCCCceEeeeEEEccCCeEEEEEeeecCC----CcceEEEEEEcCCCCCccceeecCCCCceEecCC----------
Q 008686 110 -QPFDANSCWSGSVTILPGGNPAVLYTGIDAG----NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPAD---------- 174 (557)
Q Consensus 110 -~~~d~~gv~SGsav~~~dg~~~l~YTg~~~~----~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~---------- 174 (557)
..||..++|.++++.. +|++||||++.... ..+.+++|+|+++. ..|++. .+||+.+..
T Consensus 104 ~g~Wd~~~vwaP~Vi~~-dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~----GpWtr~-d~Pil~p~~dg~w~~d~~~ 177 (349)
T cd08992 104 KGAYDDRSVFTPEVLEH-EGTYYLVYQVVKSPYLNRSFESIAMAVADSPY----GPWTKS-DEPILSPSNDGIWKGDEDN 177 (349)
T ss_pred CCCccccceECcEEEEE-CCEEEEEEEecccccCCCCcceEEEEEECCcc----cccccC-CCcEecCCcCCceeeccCc
Confidence 3589999999999875 99999999986431 23567999998763 359886 579985421
Q ss_pred --------CCCCCCccCCeEEEecCCCeEEEEEeeecC--------CccEEEEEEeCCCC-CCEEc
Q 008686 175 --------QIDPGSFRDPTTAWIGPDKIWRVIIGSKIN--------DTGLAILYRSKDFV-NWTKA 223 (557)
Q Consensus 175 --------~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~--------~~G~i~ly~S~Dl~-~W~~~ 223 (557)
.++...+.||.|+. .+|+|||++.+... ..-+|.++.|++.. -|+..
T Consensus 178 ~~~~~~~g~wD~~~v~~P~v~~--~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~GPf~r~ 241 (349)
T cd08992 178 RFLVKKKGSFDSHKVHDPCLFP--FNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPEGPYVKS 241 (349)
T ss_pred eeEeccCCCcccCceECCEEEE--ECCEEEEEEEccccCcccccCCCCceEEEEEECCCCCCCEeC
Confidence 13455678999654 47899999966431 12368999998875 57654
No 21
>cd08998 GH43_ABN_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=99.61 E-value=5.1e-14 Score=144.27 Aligned_cols=179 Identities=20% Similarity=0.196 Sum_probs=124.2
Q ss_pred ccCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCCCCCC-------cCCCceEeeeEEEccCCeEEEE
Q 008686 61 MNDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQP-------FDANSCWSGSVTILPGGNPAVL 133 (557)
Q Consensus 61 ~nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~-------~d~~gv~SGsav~~~dg~~~l~ 133 (557)
+.|| .+++++|+||||+... ++++++|+||+||+..+.+|.+... ....++|.++++.. +|+++||
T Consensus 1 ~~DP-~v~~~~~~yyl~~t~~-----~i~i~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~wAP~v~~~-~g~yyl~ 73 (288)
T cd08998 1 VHDP-SIIKEGDTYYLFSTGN-----GIAIAKSKDLGNWTYVGSVFPTGPPWWSSIDPGGSGNLWAPDVIYL-NGKYYLY 73 (288)
T ss_pred CCCC-eEEEECCEEEEEEcCC-----CeEEEECCCCCCcEECCccccCCCccccccccCCCCCccCCeEEEE-CCEEEEE
Confidence 4699 5889999999999953 7999999999999999988865432 34568999999875 9999999
Q ss_pred EeeecCC-CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEEEE
Q 008686 134 YTGIDAG-NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILY 212 (557)
Q Consensus 134 YTg~~~~-~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly 212 (557)
|++.... ....+++|+|++.. ...|++. +||+...++......+||.++ .+++|++||++++.. +.+.+.
T Consensus 74 ys~~~~~~~~~~i~va~s~~~~---~gpw~~~--~~v~~~~~~~~~~~~iDp~vf-~d~dG~~Yl~~~~~~---~~i~~~ 144 (288)
T cd08998 74 YSVSTFGSNRSAIGLATSDTLP---DGPWTDH--GIVIESGPGRDDPNAIDPNVF-YDEDGKLWLSFGSFW---GGIFLV 144 (288)
T ss_pred EEEEeCCCCceEEEEEEeCCCC---CCCCEEc--ceeeecCCCCCCcccccCCEE-EcCCCCEEEEeeecc---CCEEEE
Confidence 9987643 45667889988750 1478873 588865433233467899965 446899999998643 123344
Q ss_pred Ee-CC---CCCCEEcccccccCC-CCCceeecceEEecCCCCCCeeecccCCceeEEEEEeec
Q 008686 213 RS-KD---FVNWTKAEQSLYSTN-QSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLS 270 (557)
Q Consensus 213 ~S-~D---l~~W~~~~~~~~~~~-~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~ 270 (557)
+. +| ...|......+.... .....|-|.+|+-+ | +++|++|..
T Consensus 145 ~l~~~~~~~~~~~~~~~~i~~~~~~~~~~Egp~~~k~~--g-------------~YYl~~S~~ 192 (288)
T cd08998 145 ELDPKTGKPLYPGGYGYNIAGRPRGHGAIEAPYIIYRG--G-------------YYYLFVSYG 192 (288)
T ss_pred EeCcccCCccCCCCcceEEeccCCCCCceeeeEEEEeC--C-------------EEEEEEEcc
Confidence 43 22 123321111122111 24468999999987 5 888888854
No 22
>cd08984 GH43_5 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.57 E-value=1.4e-13 Score=141.51 Aligned_cols=165 Identities=21% Similarity=0.271 Sum_probs=119.4
Q ss_pred ccCCcceEEE--CCEEEEEEEEe---------cCC-CeEEEEEEeCC-CCcceecCCCCCCCCCcCCCceEeeeEEEccC
Q 008686 61 MNDPNGPMIY--KGIYHFFYQYK---------LWD-TVVWGHSTSTD-MVNWTPHDAAIYPSQPFDANSCWSGSVTILPG 127 (557)
Q Consensus 61 ~nDPnG~~~~--~G~YHlfyq~~---------~~g-~~~Wgha~S~D-lvhW~~~~~aL~P~~~~d~~gv~SGsav~~~d 127 (557)
.-|| .+++. +|+|||||... .|. ...+++|+|+| |+||+.++.++.++..+....+|++.++.. +
T Consensus 11 ~~DP-~i~~~~~~~~~~~~yT~~~~~~~~~~~~w~~~~~i~~a~S~D~l~~W~~~g~~~~~~~~~~~~~~WAP~v~~~-~ 88 (294)
T cd08984 11 AADP-TIIYNRETKEWWMFYTNRRANVPTPGVAWVHGTDIGVASSKDGGATWTYRGTADGLEFECGRNTFWAPEVVWH-G 88 (294)
T ss_pred CCCC-EEEEeCCCCEEEEEEccccCcCCCCCcccCcCceEEEEEeCCCCCCCEEeeeeccCCCCCcccceeCceEEEE-C
Confidence 7899 57777 78999999532 111 35899999999 999999987776655666677999999875 8
Q ss_pred CeEEEEEeeecC-----CCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeee
Q 008686 128 GNPAVLYTGIDA-----GNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSK 202 (557)
Q Consensus 128 g~~~l~YTg~~~-----~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~ 202 (557)
|+++|||+.... ......++|+|+| +.+|++.+ ++... .....||.|+ ...+|+|+|++...
T Consensus 89 G~y~myys~~~~~~~~~~~~~~i~~a~S~D-----l~~w~~~~--~~~~~-----~~~~iD~~vf-~~~dg~~yl~y~~~ 155 (294)
T cd08984 89 GVYHMYVTYIPGVPPDWGGPRRIVHYTSPN-----LWDWTFVG--RVDLD-----SDRVIDACVF-KLPDGRWRMWYKDE 155 (294)
T ss_pred CEEEEEEEecCCCCcccCCCcEEEEEECCC-----cCcceECC--ccccC-----CCCcEEeEEE-EeCCCEEEEEEECC
Confidence 999999997642 1235678888887 36898753 33211 1345799964 44579999999653
Q ss_pred cCCccEEEEEEeCCCCCCEEcccccccCCCCCceeecceEEec
Q 008686 203 INDTGLAILYRSKDFVNWTKAEQSLYSTNQSGMWECPDFFPVS 245 (557)
Q Consensus 203 ~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~~~ECPdlf~l~ 245 (557)
.. ...+.+..|+|+.+|+..+. ... ...-|.|.+|+.+
T Consensus 156 ~~-~~~~~~a~s~D~~~w~~~~~-~i~---~~~~EgP~v~k~~ 193 (294)
T cd08984 156 RR-GSTTYAADSEDLYHWTVEGP-VLG---DRPHEGPNVFRWK 193 (294)
T ss_pred CC-CeEEEEEECCCCCEEEeCCc-ccc---CCCCCCCCeeEEC
Confidence 22 23567889999999997653 332 1234999999987
No 23
>cd08985 GH43_6 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.50 E-value=1.9e-12 Score=131.19 Aligned_cols=194 Identities=16% Similarity=0.078 Sum_probs=133.7
Q ss_pred CCcceEEECCEEEEEEEEec---CCCeEEEEEEeCCCCcceecCCCCCCCC----CcCCCceEeeeEEEcc-CCeEEEEE
Q 008686 63 DPNGPMIYKGIYHFFYQYKL---WDTVVWGHSTSTDMVNWTPHDAAIYPSQ----PFDANSCWSGSVTILP-GGNPAVLY 134 (557)
Q Consensus 63 DPnG~~~~~G~YHlfyq~~~---~g~~~Wgha~S~DlvhW~~~~~aL~P~~----~~d~~gv~SGsav~~~-dg~~~l~Y 134 (557)
|| ++++++|+|++|-.... .....|...+|+||+||+.++.+|.+.. .+...++|.++++..+ +|+++|+|
T Consensus 5 ~~-~i~~~~~~yY~ygs~~~~~~~~~~gi~~~sS~DLvnW~~~g~vl~~~~~~~~~~~~~~~waP~v~y~~~~g~Y~m~~ 83 (265)
T cd08985 5 GG-GILKVGGTYYWYGENKGGGDTAFGGVSCYSSTDLVNWTFEGLALTPEEDSADLGPGRIIERPKVIYNAKTGKYVMWM 83 (265)
T ss_pred cC-ceEEECCEEEEEEEecCCCCcccccEEEEECCCCccceECceeccccccccccccCcEEECCeEEEeCCCCEEEEEE
Confidence 66 68899999999988762 1246788899999999999999997764 3456679999998753 58999999
Q ss_pred eeecCC-CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEEEEE
Q 008686 135 TGIDAG-NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYR 213 (557)
Q Consensus 135 Tg~~~~-~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly~ 213 (557)
++...+ ....+++|+|++.. ..|+... .+. +. ....|||.|+ .+++|++||++++..+ ..+.+++
T Consensus 84 ~~~~~~~~~~~igvA~Sd~p~----Gpf~~~~-~~~---~~---~~~~~Dp~vf-~DdDG~~Yl~~~~~~~--~~i~i~~ 149 (265)
T cd08985 84 HIDSSDYSDARVGVATSDTPT----GPYTYLG-SFR---PL---GYQSRDFGLF-VDDDGTAYLLYSDRDN--SDLYIYR 149 (265)
T ss_pred EeCCCCCcceeEEEEEeCCCC----CCCEECC-ccC---CC---CCCccCCceE-EcCCCCEEEEEecCCC--CceEEEE
Confidence 987532 34678899987653 3466532 121 21 2457999964 5578999999987532 3355666
Q ss_pred e-CCCCCCEEcccccccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecC---CceeEEEEEEEecCCCeE
Q 008686 214 S-KDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSN---YQQDYYTIGTYNITTDTY 289 (557)
Q Consensus 214 S-~Dl~~W~~~~~~~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~---~~~~~Y~vG~~d~~~~~F 289 (557)
- +|+..+... +.. .......|||.+|+.+ | +|+|+.|... .....|++.+ ...++|
T Consensus 150 L~~d~~~~~~~--~~~-~~~~~~~EaP~i~K~~--g-------------~YYL~~S~~t~~~~~~~~y~~s~--s~~GP~ 209 (265)
T cd08985 150 LTDDYLSVTGE--VTT-VFVGAGREAPAIFKRN--G-------------KYYLLTSGLTGWNPNDARYATAT--SILGPW 209 (265)
T ss_pred eCCCcccccce--EEE-ccCCCccccceEEEEC--C-------------EEEEEEccCCCccCCceEEEEec--CCCCCc
Confidence 4 677776432 221 1234578999999998 6 8999988642 2345677665 123456
Q ss_pred ee
Q 008686 290 IA 291 (557)
Q Consensus 290 ~~ 291 (557)
+.
T Consensus 210 ~~ 211 (265)
T cd08985 210 TD 211 (265)
T ss_pred cc
Confidence 43
No 24
>PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety. On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B.
Probab=99.49 E-value=6e-13 Score=137.67 Aligned_cols=160 Identities=18% Similarity=0.299 Sum_probs=113.8
Q ss_pred cCCcceEEECCE--EEEEEEEe-cCCC-eEEEEEEeCCCCcceecC-CCCCCCCCcCCCceEeeeEEEccCCeEEEEEee
Q 008686 62 NDPNGPMIYKGI--YHFFYQYK-LWDT-VVWGHSTSTDMVNWTPHD-AAIYPSQPFDANSCWSGSVTILPGGNPAVLYTG 136 (557)
Q Consensus 62 nDPnG~~~~~G~--YHlfyq~~-~~g~-~~Wgha~S~DlvhW~~~~-~aL~P~~~~d~~gv~SGsav~~~dg~~~l~YTg 136 (557)
-.| |++.++|. |||.|... ..+. .+.|+|.|+|.+||+..+ ++|.|+..++..||.+++++.. +|+++|+||+
T Consensus 33 fNp-gai~~~~~~R~~l~yr~~~~~~~~~~iglA~S~DGi~f~~~~~pil~P~~~~e~~GvEDPRVt~i-~d~yymtYta 110 (312)
T PF04041_consen 33 FNP-GAIVFDGGLRVYLLYRAYGSDIGSSRIGLARSDDGIHFERDPEPILYPDTDYEEWGVEDPRVTKI-DDTYYMTYTA 110 (312)
T ss_dssp EEE-EEEEETTE--EEEEEEEEESSSSEEEEEEEEESSSSS-EE-SS-SBEE-SSTTHTEEEEEEEEEE-TTEEEEEEEE
T ss_pred EcC-cEEEECCeeEEEEEEEeECCCCceeEEEEEEccCCcCceECCCCEEccCCCCcccCccceeEEEE-CCEEEEEEEE
Confidence 357 67766666 89999887 3333 489999999999999874 7899999999999999999986 8999999999
Q ss_pred ecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCC---CCCCCCccCCeEEEec-CCCeEEEEEeeecCCccEEEEE
Q 008686 137 IDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPAD---QIDPGSFRDPTTAWIG-PDKIWRVIIGSKINDTGLAILY 212 (557)
Q Consensus 137 ~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~---~~~~~~fRDP~V~~~~-~~g~~~m~~ga~~~~~G~i~ly 212 (557)
.+. .....++|+|+|. .+|+|.+ +++.... ......-+|-. +|.+ .+|+|+|+.+ .+.|.+.
T Consensus 111 ~~~-~~~~~~la~s~D~-----~~~~r~g--~~~~~~~~~~~~~~~~~kd~~-lfp~ki~Gky~m~~r-----~~~i~la 176 (312)
T PF04041_consen 111 YSG-KGPRIGLATSKDF-----KHWERHG--KIFPPFNGNEDYRDFWSKDGA-LFPEKINGKYAMLHR-----DPSIWLA 176 (312)
T ss_dssp EES-SSEEEEEEEESSS-----SSEEEEE--CTTTTTCTS-EEEEEEEECCE-EEESEETTEEEEEEE-----SSSBEEE
T ss_pred ecC-CCcccceEEccch-----HhhEEec--cccCcccccccccccccCceE-EEEEEECCEEEEEEC-----CCCEEEE
Confidence 975 4567899999984 8999974 2222111 00011225554 3332 4899999998 4578999
Q ss_pred EeCCCCCCEEcccccccCCCCCceee
Q 008686 213 RSKDFVNWTKAEQSLYSTNQSGMWEC 238 (557)
Q Consensus 213 ~S~Dl~~W~~~~~~~~~~~~~~~~EC 238 (557)
.|+|+++|+....++... ..+.||.
T Consensus 177 ~S~Dl~~W~~~~~~~~~~-~~~~~d~ 201 (312)
T PF04041_consen 177 YSPDLIHWGNHREPLLSP-RPGWWDS 201 (312)
T ss_dssp EESSSSSEEEEBETSB---STTSSCS
T ss_pred ecCCcccccccccccccC-CCCcChh
Confidence 999999998775544432 3446776
No 25
>cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=99.45 E-value=5.5e-12 Score=129.29 Aligned_cols=178 Identities=13% Similarity=0.149 Sum_probs=120.2
Q ss_pred CCccCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCCCCCC--c----CCCceEeeeEEEccCCeEEE
Q 008686 59 SWMNDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQP--F----DANSCWSGSVTILPGGNPAV 132 (557)
Q Consensus 59 gw~nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~--~----d~~gv~SGsav~~~dg~~~l 132 (557)
+..-||. ++.++|+|+||.....+ ...+..++|+||+||+.++.+|.+... + ...++|++.++.. +|++||
T Consensus 6 ~~~~DP~-i~~~~~~yy~~~t~~~~-~~~i~~~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~~-~g~yy~ 82 (288)
T cd09000 6 GFYPDPS-ICRVGDDYYLVTSSFEY-FPGVPIFHSKDLVNWELIGHALTRPSQLDLDGLPDSGGIWAPTIRYH-DGTFYL 82 (288)
T ss_pred CCCCCCC-EEEECCEEEEEECCccc-CCCceEEECCCcCCcEEcccccCCcccccccCCCCCCceEcceEEEE-CCEEEE
Confidence 4677995 78899999998643222 246899999999999999988754322 2 3457999999875 999999
Q ss_pred EEeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecC-----Ccc
Q 008686 133 LYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIN-----DTG 207 (557)
Q Consensus 133 ~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~-----~~G 207 (557)
||++........+++|+|++.. ..|++ |++.. ....||.+++ +++|++||+++.... ..+
T Consensus 83 yy~~~~~~~~~~~~v~~s~~p~----gpw~~----~~~~~------~~~iDp~vf~-d~dG~~Y~~~~~~~~~~~~~~~~ 147 (288)
T cd09000 83 ITTNVDGMKDGGNFIVTADDPA----GPWSD----PVWLD------SGGIDPSLFF-DDDGKVYLVGNGWDERRGYNGHG 147 (288)
T ss_pred EEEecCCCCCCceEEEEeCCCC----CCCcC----CEecC------CCccCCceeE-cCCCCEEEEecccCCccccCCCC
Confidence 9998764334557788887753 34653 33321 1558999654 468999999886432 234
Q ss_pred EEEEEEeCCCCCCEEcccc--cccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeec
Q 008686 208 LAILYRSKDFVNWTKAEQS--LYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLS 270 (557)
Q Consensus 208 ~i~ly~S~Dl~~W~~~~~~--~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~ 270 (557)
.|.+.+.+ ...|+..+.+ +.........|+|.+|+.+ | +++|++|..
T Consensus 148 ~i~~~~l~-~~~~~~~~~~~~~~~~~~~~~~Egp~v~k~~--g-------------~YYl~ys~~ 196 (288)
T cd09000 148 GIWLQEID-LETGKLLGEPKVIWNGTGGRWPEGPHLYKRD--G-------------WYYLLIAEG 196 (288)
T ss_pred cEEEEEEc-cccCCCCCCcEEEEeCCCCCCcccCeEEEEC--C-------------EEEEEEecC
Confidence 56666543 3344444432 2222233578999999987 6 888888754
No 26
>cd09003 GH43_AXH_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose
Probab=99.42 E-value=9.9e-12 Score=128.87 Aligned_cols=182 Identities=15% Similarity=0.272 Sum_probs=124.4
Q ss_pred CCccCCcceEEECCEEEEEEEEec--C-----------CCeEEEEEEeCCCCcceecCCCCCCC--CCcCCCceEeeeEE
Q 008686 59 SWMNDPNGPMIYKGIYHFFYQYKL--W-----------DTVVWGHSTSTDMVNWTPHDAAIYPS--QPFDANSCWSGSVT 123 (557)
Q Consensus 59 gw~nDPnG~~~~~G~YHlfyq~~~--~-----------g~~~Wgha~S~DlvhW~~~~~aL~P~--~~~d~~gv~SGsav 123 (557)
.+.-||. ++.++|+|+||..... . ....+-..+|+||++|+.++.+|.|. ..|. .++|.+.++
T Consensus 7 ~~~aDP~-~~~~~g~yY~~~t~~~~~~~~~~~~~~~~~~~~~i~v~~S~DL~~W~~~g~v~~~~~~~~w~-~~~WAP~v~ 84 (311)
T cd09003 7 RYGADPT-AVVYNGRVYVYTTNDDYEYDSNTIKDNNYYNINDITVISSDDMVNWTDHGEIFVPNGIAKWA-GNSWAPSIA 84 (311)
T ss_pred CccCCCC-eEEECCEEEEEeCCCCccccccccccCCccccCcEEEEECCCCCCcEEcccccCcCCCCCcc-cccCCCceE
Confidence 4567995 6789999999998751 1 12368899999999999999888732 3454 478999998
Q ss_pred EccC----CeEEEEEeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecC-CCCCCC-CccCCeEEEecCCCeEEE
Q 008686 124 ILPG----GNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPA-DQIDPG-SFRDPTTAWIGPDKIWRV 197 (557)
Q Consensus 124 ~~~d----g~~~l~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p-~~~~~~-~fRDP~V~~~~~~g~~~m 197 (557)
.. + |++||+|+.. ...+++|+|++.. ..|+.....|++... ++.... .-.||.++ .+++|++||
T Consensus 85 ~~-~~~~~gkyylyy~~~----~~~igva~SdsP~----GP~~~~~g~~l~~~~~~~~~~~~~~iDp~~f-~DdDG~~Yl 154 (311)
T cd09003 85 VK-KINGKGKFYLYFANG----GGGIGVLTADSPV----GPWTDPLGKPLITGSTPGCAGVVWLFDPAVF-VDDDGQGYL 154 (311)
T ss_pred Ee-ccCCCCEEEEEEecC----CCeEEEEEcCCCC----CCcccCCCCeeecCCCCCccCCccccCCCeE-ECCCCCEEE
Confidence 75 6 9999999853 2447899988763 468875456777532 222112 23799964 447899999
Q ss_pred EEeeecC-----CccEEEEEEe-CCCCCCEEcccccccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeec
Q 008686 198 IIGSKIN-----DTGLAILYRS-KDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLS 270 (557)
Q Consensus 198 ~~ga~~~-----~~G~i~ly~S-~Dl~~W~~~~~~~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~ 270 (557)
++++... ..+.+.+.+- +|+..- .+++.. ......+|.|.+++.+ | +++|.+|..
T Consensus 155 ~~g~~~~~~~~~~~~~i~i~~l~~D~~~~--~g~~~~-i~~~~~~Egp~~~K~~--G-------------~YYL~ys~~ 215 (311)
T cd09003 155 YFGGGVPGGRWANPNTARVIKLGDDMISV--DGSAVT-IDAPYFFEASGLHKIN--G-------------TYYYSYCTN 215 (311)
T ss_pred EECCccCCCccccCCCEEEEEeCCCceec--cCCceE-ccCCCceEeeeEEEEC--C-------------EEEEEEeCC
Confidence 9986431 1234666665 466443 232211 1122579999999987 6 889988864
No 27
>PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B ....
Probab=99.40 E-value=1.8e-11 Score=124.67 Aligned_cols=183 Identities=20% Similarity=0.261 Sum_probs=127.2
Q ss_pred CCccCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCCCCCCcC--CCce-EeeeEEEccCCeEEEEEe
Q 008686 59 SWMNDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFD--ANSC-WSGSVTILPGGNPAVLYT 135 (557)
Q Consensus 59 gw~nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d--~~gv-~SGsav~~~dg~~~l~YT 135 (557)
+..-||. ++.++|.|+||+...... ..+..++|+||+||+..+.+|.+....+ ..+. |.+.++.. +|+++|||+
T Consensus 8 ~~~~DP~-i~~~~~~yY~~~t~~~~~-~~i~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~WAP~i~~~-~g~yy~y~~ 84 (286)
T PF04616_consen 8 GDYADPS-IVRFGDGYYLYGTTDPEG-PGIPVWSSKDLVNWTDAGNVLPPPPDWDWANNGNIWAPEIHYI-NGKYYMYYS 84 (286)
T ss_dssp SSECSEE-EEEETTEEEEEEEEBTCE-SBEEEEEESSSSSEEEEEECESSTTTTSTTTSETTEEEEEEEE-TTEEEEEEE
T ss_pred CCCCCCE-EEEECCEEEEEEEcCCCC-CeEEEEECCCCcccccceeeecccccccccccccccCCeEEEc-CCeEEEEEE
Confidence 5667995 788999999999876322 5688999999999999998776665433 2333 99999874 999999999
Q ss_pred eecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCC--ccEEEEEE
Q 008686 136 GIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIND--TGLAILYR 213 (557)
Q Consensus 136 g~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~--~G~i~ly~ 213 (557)
.........+++|+|++.. ..|+... .+... .....||.++ .+++|++||+++..... .+.|.+.+
T Consensus 85 ~~~~~~~~~~~va~a~~~~----Gp~~~~~--~~~~~-----~~~~iD~~vf-~d~dG~~Yl~~~~~~~~~~~~~i~~~~ 152 (286)
T PF04616_consen 85 DSGGDAGSGIGVATADSPD----GPWTDPG--KIPIP-----GGNSIDPSVF-VDDDGKYYLYYGSWDNGDPGGGIYIAE 152 (286)
T ss_dssp EESTSTTEEEEEEEESSTT----S-EEEEE--EEEEE-----SSSSSSEEEE-EETTSEEEEEEEESTTTSSEEEEEEEE
T ss_pred ccCCCCCcceeEEEeCCcc----ccccccc--ceeec-----cccccCceEE-EecCCCcEEeCcccCCCccceeEEeec
Confidence 3332345668899998763 4688642 22211 2356899965 44679999999986532 34566666
Q ss_pred e-CCCCCCEEcc-cccccC---CCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecC
Q 008686 214 S-KDFVNWTKAE-QSLYST---NQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSN 271 (557)
Q Consensus 214 S-~Dl~~W~~~~-~~~~~~---~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~ 271 (557)
. +|...+.... ..+... ......|.|.+|+.+ | +++|++|...
T Consensus 153 l~~d~~~~~~~~~~~~~~~~~~~~~~~~Egp~~~k~~--g-------------~yYl~~s~~~ 200 (286)
T PF04616_consen 153 LDPDGTSLTGEPVVVIFPGDEGWDGGVVEGPFVFKHG--G-------------KYYLFYSAGG 200 (286)
T ss_dssp EETTTSSEEEEECEEEEEESGSSTTTBEEEEEEEEET--T-------------EEEEEEEESG
T ss_pred ccCccccccCcccccccccccccCCccccceEEEEcC--C-------------CEEEEEeccC
Confidence 5 5666665443 122222 245689999999997 6 8889888643
No 28
>cd08983 GH43_4 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.35 E-value=1.2e-10 Score=118.71 Aligned_cols=178 Identities=16% Similarity=0.118 Sum_probs=121.5
Q ss_pred CCCccCCcceEEE--CCEEEEEEEEec----C-CCeEEEEEEeCCCCcceecCCCCCCCCCcCCCceEeeeEEEcc-CCe
Q 008686 58 SSWMNDPNGPMIY--KGIYHFFYQYKL----W-DTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSVTILP-GGN 129 (557)
Q Consensus 58 ~gw~nDPnG~~~~--~G~YHlfyq~~~----~-g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d~~gv~SGsav~~~-dg~ 129 (557)
.+-+.||. +++. +|+|||++.... + +...+.+++|+||+||+..+.++.... ...++|.+.++.++ +|+
T Consensus 15 ~~~~rDP~-I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~--~~~~~WAPev~~d~~~g~ 91 (276)
T cd08983 15 TKGLRDPF-ILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPP--NAGNTWAPEAFWDAERGQ 91 (276)
T ss_pred CCCccCCe-EEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCC--CcCcEeCccceEcCCCCe
Confidence 35578995 6666 899999999762 1 457899999999999999887642211 23568999998753 689
Q ss_pred EEEEEeeecCC---CcceEEE--EEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecC
Q 008686 130 PAVLYTGIDAG---NKQVQNL--AVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIN 204 (557)
Q Consensus 130 ~~l~YTg~~~~---~~~~q~l--A~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~ 204 (557)
++|+|+..... ....+.+ +.+.| +.+|++ ..|++.+ + ....|+.++ + .+|+|||++....+
T Consensus 92 y~~~~s~~~~~~~~~~~~~~i~~~tt~D-----f~tft~--p~~~~~~--~---~~~ID~~v~-~-~~g~~Yl~~k~~~~ 157 (276)
T cd08983 92 YVVYWSSRLYDNTGGFYNYRLYATTTSD-----FVTFTE--PKVWIDL--G---ANVIDTTVV-K-VGGTYYRFYKNEGS 157 (276)
T ss_pred EEEEEecccCCCCCCCccEEEEEEecCc-----ccccCC--CeEeecC--C---CCeEeeEEE-E-eCCEEEEEEecCCC
Confidence 99999987542 1222333 33334 368886 3566652 2 366899854 4 35899999875432
Q ss_pred CccEEEEEEeCCCC-CCEEcccccccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEee
Q 008686 205 DTGLAILYRSKDFV-NWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSL 269 (557)
Q Consensus 205 ~~G~i~ly~S~Dl~-~W~~~~~~~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~ 269 (557)
+.|.+.+|++|. .|+...... .......|-|.+|+.+..| +|+|+++.
T Consensus 158 --~~i~~~~s~~l~g~~~~~~~~~--~~~~~~~EgP~v~k~~~~~-------------~y~L~~d~ 206 (276)
T cd08983 158 --KDIELARSKSLTGPWTIVGTGD--AGWGGAVEGPTVFKLNNGG-------------GWYLYGDN 206 (276)
T ss_pred --CcEEEEEeCCCCCCceEecccc--cCCCCceeCCeEEEECCCC-------------EEEEEEEE
Confidence 458888999986 677654321 1223578999999998322 78887653
No 29
>PF08244 Glyco_hydro_32C: Glycosyl hydrolases family 32 C terminal; InterPro: IPR013189 This domain corresponds to the C-terminal domain of glycosyl hydrolase family 32. It forms a beta sandwich module [].; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 1W2T_C 1UYP_A 3UGG_A 3UGH_B 3UGF_B ....
Probab=99.32 E-value=7.3e-12 Score=104.89 Aligned_cols=75 Identities=33% Similarity=0.438 Sum_probs=55.2
Q ss_pred cceEEEEEEcCCCceeEEEEEEEeeCCCceEEEEeecCCCCCCCCCCCCCcceeEE---eecCCCCeEEEEEEEeCCeEE
Q 008686 429 CPFGLLVLASNGLQEYTAVFFRIFKGQDRHIVLMCSDQSRSSINDDNDKTSYGAFL---DLDPVHEKLSIRSLIDRSIVE 505 (557)
Q Consensus 429 ~~fgl~l~~s~d~~e~t~i~~d~~~~~~~~~~~~~vDr~rS~~~~~~~~~~~~~~~---~~~~~~~~~~LrIfvD~S~vE 505 (557)
..+||.|+++.+.+|+|.|+||..+ +. +++||++|+.. ...+.++... ++...++.++||||||+|+||
T Consensus 9 ~~~g~~l~~s~~~~e~~~i~~d~~~---~~---l~vDR~~s~~~--~~~~~~~~~~~~~~~~~~~~~l~L~i~vD~SsvE 80 (86)
T PF08244_consen 9 DSFGLRLRASNDGGEETSIGYDPAN---GT---LTVDRTNSGIN--DFSEEFGTFVRSAPLDLGDKILKLRIFVDRSSVE 80 (86)
T ss_dssp CEEEEEEEEETTSSSEEEEEEETTT---TE---EEEEETTSSTT--SCCCEEEEEEEEEETTTTESEEEEEEEEETTEEE
T ss_pred CCeEEEEEECCCccEEEEEEEECCC---CE---EEEeCCCCccc--ccccccCcceEEeeccCCCCcEEEEEEEeCCEEE
Confidence 4789999999999999999999542 32 46799999722 2234444422 222224678999999999999
Q ss_pred EEecCC
Q 008686 506 SFGGGG 511 (557)
Q Consensus 506 VFvNdG 511 (557)
||+|||
T Consensus 81 iFvNdG 86 (86)
T PF08244_consen 81 IFVNDG 86 (86)
T ss_dssp EEETTT
T ss_pred EEECCC
Confidence 999987
No 30
>cd08988 GH43_ABN Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla
Probab=99.32 E-value=1.8e-10 Score=117.61 Aligned_cols=179 Identities=21% Similarity=0.217 Sum_probs=117.0
Q ss_pred CCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCCCCCCcC-------CCceEeeeEEEccCCeEEEEEe
Q 008686 63 DPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFD-------ANSCWSGSVTILPGGNPAVLYT 135 (557)
Q Consensus 63 DPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d-------~~gv~SGsav~~~dg~~~l~YT 135 (557)
||. ++.++|+|+||.... .+..++|+||+||+..+.+|.+...|. ..++|.+.++.. +|+++|||+
T Consensus 2 DP~-vi~~~~~YY~~~T~~-----g~~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~~~-~G~yylyys 74 (279)
T cd08988 2 DPV-IIKEGDTWYVFGTGP-----GITILSSKDLVNWTYSGSAFATEPTWKKRVPPSFDGHLWAPDIYQH-NGKFYLYYS 74 (279)
T ss_pred CCE-EEEECCEEEEEEecC-----CEEEEECCCcCCccccCccccCCCccccccCCCCCCCEecceEEEE-CCEEEEEEE
Confidence 894 778899999988732 578899999999999998886443332 357999999875 899999999
Q ss_pred eecCC-CcceEEEEEEcCCCCCcc-ceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEEEEE
Q 008686 136 GIDAG-NKQVQNLAVPKNLSDPYL-KEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYR 213 (557)
Q Consensus 136 g~~~~-~~~~q~lA~s~d~~d~~l-~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly~ 213 (557)
+.... ....+++|+|++...|.- ..|++ .++++..... ......||.+++. ++|++||++|+.. +.|.+.+
T Consensus 75 ~~~~~~~~~~igva~s~~p~Gp~~~~~w~~--~~~i~~~~~~-~~~~~iDp~~f~D-dDG~~Yl~~g~~~---~gi~~~e 147 (279)
T cd08988 75 VSAFGSNTSAIGLAVNKTIDGPSPDYGWEK--GGVVISSDAS-DNYNAIDPAIIFD-QHGQPWLSFGSFW---GGIKLFE 147 (279)
T ss_pred eccCCCCCceEEEEEcCCCCCCCcCcCccc--cCceEecCCC-CCCCccCCceEEc-CCCCEEEEecccC---CCEEEEE
Confidence 86532 346678999987654311 11443 2566653221 1234579996544 7899999998632 2244444
Q ss_pred -eCCCCCCEEcccc--cccC-CCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeec
Q 008686 214 -SKDFVNWTKAEQS--LYST-NQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLS 270 (557)
Q Consensus 214 -S~Dl~~W~~~~~~--~~~~-~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~ 270 (557)
+.|+..-...+.. +... ......|-|-+++-+ | +++|..|..
T Consensus 148 L~~d~~~~~~~~~~~~i~~~~~~~~~~Egp~i~k~~--g-------------~YYl~~S~g 193 (279)
T cd08988 148 LDKDTMKPAEPGELHSIAGRERSSAAIEAPFILYRG--D-------------YYYLFVSFG 193 (279)
T ss_pred ECcccCCccCCCcceEEeccCCCCCceEeeEEEEcC--C-------------eEEEEEEcC
Confidence 3454332111111 2111 123578999999987 5 888887753
No 31
>cd08981 GH43_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.26 E-value=3.5e-10 Score=116.23 Aligned_cols=131 Identities=15% Similarity=0.257 Sum_probs=93.3
Q ss_pred CCccCCcceEEE--CCEEEEEEEEe--cCC--CeEEEEEEeCCCCcceecCCCCCCCC-CcCCCceEeeeEEEccCCeEE
Q 008686 59 SWMNDPNGPMIY--KGIYHFFYQYK--LWD--TVVWGHSTSTDMVNWTPHDAAIYPSQ-PFDANSCWSGSVTILPGGNPA 131 (557)
Q Consensus 59 gw~nDPnG~~~~--~G~YHlfyq~~--~~g--~~~Wgha~S~DlvhW~~~~~aL~P~~-~~d~~gv~SGsav~~~dg~~~ 131 (557)
.++-||. ++++ +|+||||.... .++ ...+.+.+|+||+||+..+.++.+.. .+...++|.+.++.. +|++|
T Consensus 4 ~~~~DP~-v~~~~~~g~yYl~~T~~~~~~~~~~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~~~-~G~yy 81 (291)
T cd08981 4 IRIRDPF-ILADPETGTYYLYGTTDPNIWGGEGTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVHEY-KGRYY 81 (291)
T ss_pred ccccCCE-EEEECCCCEEEEEEecCccccccCCCcEEEEECCChhcccccceeeccCCCcCccccccCCeeeee-CCEEE
Confidence 4578995 6777 99999999865 111 34689999999999999998886543 355568999998864 99999
Q ss_pred EEEeeecCC-CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEee
Q 008686 132 VLYTGIDAG-NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGS 201 (557)
Q Consensus 132 l~YTg~~~~-~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga 201 (557)
|||+..... ....+++|+|++.. -.|+.....|+... .....||.+ |.+++|++||+++.
T Consensus 82 ly~s~~~~~~~~~~~~va~s~~p~----GP~~~~~~~~~~~~-----~~~~iDp~~-f~DdDG~~Yl~~~~ 142 (291)
T cd08981 82 MFATFHNPGGERRGTAILVSDSPE----GPFVPHSDGPVTPE-----DWMCLDGTL-YVDEDGKPWMVFCH 142 (291)
T ss_pred EEEEeccCCCceeeEEEEECCCCC----CCCEeCCCCccCCC-----CCceEcCce-EEcCCCCEEEEEEe
Confidence 999876532 22346788887653 35776433344221 124579985 55578999999874
No 32
>cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J. This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta
Probab=99.25 E-value=1e-10 Score=118.17 Aligned_cols=134 Identities=23% Similarity=0.359 Sum_probs=97.6
Q ss_pred CCccCCcceEEEC-CEEEEEEEEec---CCCeEEEEEEeCCCCcceecCCCCC-------CCCCcCCCceEeeeEEEccC
Q 008686 59 SWMNDPNGPMIYK-GIYHFFYQYKL---WDTVVWGHSTSTDMVNWTPHDAAIY-------PSQPFDANSCWSGSVTILPG 127 (557)
Q Consensus 59 gw~nDPnG~~~~~-G~YHlfyq~~~---~g~~~Wgha~S~DlvhW~~~~~aL~-------P~~~~d~~gv~SGsav~~~d 127 (557)
+.+.||. +++.+ |+|||||+... .....+++|+|+|+++|+..+..+. +...++...+.++.++..++
T Consensus 64 ~~~~~p~-v~~~~dg~~~~~Yt~~~~~~~~~~~i~~A~S~D~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~dP~v~~~~~ 142 (276)
T cd08979 64 GGVWTPS-VVRDPDGTYRMFYTGYDRPKGAVQRIGLATSKDLIHWTKHGPNPVPRWYESGNPGPWDDHAWRDPAVVRDEE 142 (276)
T ss_pred CCeEcce-EEEcCCCeEEEEEecccCCCCCcceEEEEECCCCCceEECCCCcceeeeecCCCCCcccccccccEEEEECC
Confidence 3467895 66777 99999999873 4467899999999999999875542 22344556788999987633
Q ss_pred -CeEEEEEeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeee
Q 008686 128 -GNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSK 202 (557)
Q Consensus 128 -g~~~l~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~ 202 (557)
|+++|+|++........+.+|.|.|. ++|++....+ ....+.....+++|.+ ++ .+|+|+|++.+.
T Consensus 143 ~g~y~m~~~~~~~~~~~~i~~a~S~D~-----~~W~~~~~~~--~~~~~~~~~~~e~P~~-~~-~~g~~~l~~~~~ 209 (276)
T cd08979 143 GGGWRMYYGARDADERGAIGLATSPDL-----IHWTPVPPPP--GPRTGYDDGQLEVPQV-VK-IDGRWYLLYSGR 209 (276)
T ss_pred CCEEEEEEEeEccCCCcEEEEEECCCC-----CcceECCCCC--CCCCcccCCcCccceE-EE-ECCEEEEEEEec
Confidence 89999999876545577889998874 7999864322 1122223467899995 44 468999999875
No 33
>cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins. This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.21 E-value=6e-10 Score=116.02 Aligned_cols=166 Identities=16% Similarity=0.260 Sum_probs=115.4
Q ss_pred ccCCcceEEECCEEEEEEEEe--cC---CCeEEEEEEeCCCC-cceecC-CCCCCCC------------------CcCCC
Q 008686 61 MNDPNGPMIYKGIYHFFYQYK--LW---DTVVWGHSTSTDMV-NWTPHD-AAIYPSQ------------------PFDAN 115 (557)
Q Consensus 61 ~nDPnG~~~~~G~YHlfyq~~--~~---g~~~Wgha~S~Dlv-hW~~~~-~aL~P~~------------------~~d~~ 115 (557)
+..| .+++++|+|||||+.. .. ...+.|+|+|++.. .|++.. ++|.|+. .||..
T Consensus 112 vwaP-~Vi~~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~GpWtr~d~Pil~p~~dg~w~~d~~~~~~~~~~g~wD~~ 190 (349)
T cd08992 112 VFTP-EVLEHEGTYYLVYQVVKSPYLNRSFESIAMAVADSPYGPWTKSDEPILSPSNDGIWKGDEDNRFLVKKKGSFDSH 190 (349)
T ss_pred eECc-EEEEECCEEEEEEEecccccCCCCcceEEEEEECCcccccccCCCcEecCCcCCceeeccCceeEeccCCCcccC
Confidence 4467 4778999999999964 21 23578999988887 798764 4566642 36778
Q ss_pred ceEeeeEEEccCCeEEEEEeeecC-------CCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEE
Q 008686 116 SCWSGSVTILPGGNPAVLYTGIDA-------GNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAW 188 (557)
Q Consensus 116 gv~SGsav~~~dg~~~l~YTg~~~-------~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~ 188 (557)
++..++++.. +|++||||+|+.. ...+.+++|+|++.. ..|+|.+.+||+... + ..+ ||
T Consensus 191 ~v~~P~v~~~-~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~----GPf~r~~~nPi~~~~------~--~~~-~~ 256 (349)
T cd08992 191 KVHDPCLFPF-NGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPE----GPYVKSPYNPITNSG------H--ETC-VW 256 (349)
T ss_pred ceECCEEEEE-CCEEEEEEEccccCcccccCCCCceEEEEEECCCC----CCCEeCCCCcccCCC------C--ceE-EE
Confidence 8888888765 9999999999753 134678999998874 468998889998421 2 236 68
Q ss_pred ecCCCeE-EEEEeeecCCccEEEEEEeCCCCCCEEcccccccCCCCCceeecceEEec
Q 008686 189 IGPDKIW-RVIIGSKINDTGLAILYRSKDFVNWTKAEQSLYSTNQSGMWECPDFFPVS 245 (557)
Q Consensus 189 ~~~~g~~-~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~~~ECPdlf~l~ 245 (557)
+ .++.+ .|+. ....+.|. +..|+|+++|+-...+...+...+...|||-+.-.
T Consensus 257 ~-~~~~~~~~~~-~d~~~~~~--~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (349)
T cd08992 257 Q-YKGGIAAMLT-TDGPEKNT--IQFAPDGINFEIMAHIKGAPEAIGPYRRPDADEDP 310 (349)
T ss_pred e-cCCceEEEEe-ccCCCCce--EEeCCCCccEEEeeeccCCCccccCccCcccccCC
Confidence 8 45566 4544 33334454 77899999999776433323344566777776654
No 34
>cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended
Probab=99.17 E-value=1.8e-09 Score=109.64 Aligned_cols=174 Identities=16% Similarity=0.177 Sum_probs=114.3
Q ss_pred CCccCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCCCCCCc------CCCceEeeeEEEccCCeEEE
Q 008686 59 SWMNDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQPF------DANSCWSGSVTILPGGNPAV 132 (557)
Q Consensus 59 gw~nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~------d~~gv~SGsav~~~dg~~~l 132 (557)
+..-||. ++.++|.|+||+....+ ...+...+|+||+||+..+.++.....+ ...++|.+.++.. +|+++|
T Consensus 6 ~~~~DP~-ii~~~~~yY~~~t~~~~-~~g~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~~-~G~yy~ 82 (269)
T cd08989 6 GDNPDPS-IIRAGDDYYMASSTFEW-FPGVQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIWAPCLSYY-DGKFWL 82 (269)
T ss_pred CCCCCCc-EEEECCeEEEEECcccc-CCCcEEEECCccCCCEEccccccCccccccccCCCCCcEEcceEEEE-CCEEEE
Confidence 5567995 78899999999875311 1246788999999999998877543211 2357999999875 999999
Q ss_pred EEeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEEEE
Q 008686 133 LYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILY 212 (557)
Q Consensus 133 ~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly 212 (557)
+|+.........+++|++++..+ .|+. |+... ....||.++ .+++|+.||+.+.. +.|.+.
T Consensus 83 yy~~~~~~~~~~i~va~sd~~~G----pw~~----~~~~~------~~~IDp~~f-~D~dG~~Yl~~~~~----~~i~l~ 143 (269)
T cd08989 83 IYTAVKVWKDCHNYLFTAEDITG----PWSR----PIFLN------YGGFDPSLF-HDDDGKKYLINMGW----SGIRLQ 143 (269)
T ss_pred EEeccccCCCceEEEEEECCCCC----CCcC----CEECC------CCcccCceE-EcCCCCEEEEecCC----CcEEEE
Confidence 99987433345678998876542 4653 44321 235799954 44789999998753 234454
Q ss_pred Ee-CCCCCCEEcccc----cccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecC
Q 008686 213 RS-KDFVNWTKAEQS----LYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSN 271 (557)
Q Consensus 213 ~S-~Dl~~W~~~~~~----~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~ 271 (557)
+- .|...= .+.+ +.........|-|.+++.+ | +++|++|...
T Consensus 144 ~l~~~~~~~--~~~~~~~~~~~~~~~~~~Egp~~~k~~--G-------------~YYl~~S~~~ 190 (269)
T cd08989 144 EYSPAEKKL--IGKPLNKVIIKGTDDGLTEGPHLYKIN--G-------------KYYLTTAEGG 190 (269)
T ss_pred EEChhhCCC--CCCceeEEEecCCCCCccccceEEEEC--C-------------EEEEEEeeCC
Confidence 42 232110 1111 1111223478999999987 6 8888888643
No 35
>cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=99.14 E-value=1.6e-09 Score=110.10 Aligned_cols=169 Identities=14% Similarity=0.101 Sum_probs=113.4
Q ss_pred CCccCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCCCCCC-----------cCCCceEeeeEEEccC
Q 008686 59 SWMNDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQP-----------FDANSCWSGSVTILPG 127 (557)
Q Consensus 59 gw~nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~-----------~d~~gv~SGsav~~~d 127 (557)
++.-||. +++++|+|+||.....+ ...+...+|+||+||+.++.++.+... .-..++|.+.++.. +
T Consensus 9 ~~~~DP~-v~~~~~~yY~~~t~~~~-~~gi~v~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~WAP~v~~~-~ 85 (269)
T cd09001 9 ADYPDPD-VIRVGDDYYMVSTTMHY-SPGAPILHSKDLVNWEIIGYVYDRLDDGDAYNLENGGNAYGKGQWAPSLRYH-N 85 (269)
T ss_pred CCCCCCe-EEEECCEEEEEECCccc-CCCCEEEEcccccCCeEcccccccccccccccccccCCCCCCCEECCceEEE-C
Confidence 4557995 77889999999985421 134678899999999999877643221 11347999999875 9
Q ss_pred CeEEEEEeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCcc
Q 008686 128 GNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTG 207 (557)
Q Consensus 128 g~~~l~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G 207 (557)
|++||+|+... ..+.+|+|++.. ..|+.. +++. ...||.++ .+++|+.||+++..
T Consensus 86 gkyy~yys~~~----~~~~v~~a~~p~----Gpw~~~--~~~~---------~~iDp~~f-~D~dG~~Yl~~~~~----- 140 (269)
T cd09001 86 GTFYVFFCTNT----GGTYIYTADDPE----GPWTKT--ALDG---------GYHDPSLL-FDDDGTAYLVYGGG----- 140 (269)
T ss_pred CEEEEEEEecC----CCeEEEEcCCCC----CCCcCC--CcCC---------CcccCceE-EcCCCCEEEEeCCC-----
Confidence 99999999862 346788887653 356543 1221 45799954 44789999999753
Q ss_pred EEEEEE-eCCCCCCEEcccccccCC--CCCceeecceEEecCCCCCCeeecccCCceeEEEEEeec
Q 008686 208 LAILYR-SKDFVNWTKAEQSLYSTN--QSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLS 270 (557)
Q Consensus 208 ~i~ly~-S~Dl~~W~~~~~~~~~~~--~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~ 270 (557)
.|.+.+ ++|+....-....+.... .....|-|.+++-+ | +++|++|..
T Consensus 141 ~i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~Egp~i~k~~--G-------------~YYl~~S~~ 191 (269)
T cd09001 141 TIRLVELSPDLTGVGGKDQVIIDAGEEIGLGAEGSHLYKIN--G-------------YYYIFNIAW 191 (269)
T ss_pred cEEEEEECcccCCcCCCceEEEeCCCccccccccCeEEEEC--C-------------EEEEEEecC
Confidence 345555 566665521111222221 13578999999876 5 888888875
No 36
>cd08980 GH43_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.13 E-value=2.2e-09 Score=110.05 Aligned_cols=188 Identities=14% Similarity=0.133 Sum_probs=120.8
Q ss_pred CCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCC--CCCC-CcCCCceEeeeEEEccCCeEEEEEeeecC
Q 008686 63 DPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAI--YPSQ-PFDANSCWSGSVTILPGGNPAVLYTGIDA 139 (557)
Q Consensus 63 DPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL--~P~~-~~d~~gv~SGsav~~~dg~~~l~YTg~~~ 139 (557)
||. ++.++++|+|++.... .....++|+||+||+.....+ .+.. .+...++|++.++.. +|+++|+|+....
T Consensus 2 DP~-v~~~~d~yY~~~T~~~---~~~~i~~S~dl~~w~~~~~~~~~~~~~~~~~~~~~WAP~i~~~-~g~yylyys~~~~ 76 (288)
T cd08980 2 DPW-VIRHDGYYYFTATTGE---DRIELRRSDTLAGLATAESKVVWTPPDSGPYSGNLWAPELHYI-DGKWYIYFAAGDG 76 (288)
T ss_pred CCe-EEEECCEEEEEEEeCC---CcEEEEecCChhHhhcCCcEEEecCCCCCCccccEECceEEEE-CCEEEEEEEccCC
Confidence 895 6788889999987431 568899999999999875332 2322 234568999999875 8999999997753
Q ss_pred --CCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecC---CccEEEEEEe
Q 008686 140 --GNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIN---DTGLAILYRS 214 (557)
Q Consensus 140 --~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~---~~G~i~ly~S 214 (557)
...+.+++|++++..++ +..|+.. .+++.... ..-.||.+ +.+ +|++||+++.... ....|.+.+.
T Consensus 77 ~~~~~~~~~v~~a~~~~~~-~Gpw~~~--~~~~~~~~----~~~iDp~~-~~d-dG~~Yl~~~~~~~~~~~~~~i~~~~l 147 (288)
T cd08980 77 GGNANHRMYVLENAGADPP-TGPWTFK--GRLADPTD----RWAIDGTV-FEH-NGQLYFVWSGWEGRTNGNQNLYIAKM 147 (288)
T ss_pred CCCcceeEEEEEeCCCCCC-CCCceEe--eEeccCCC----CeeeeeEE-EEE-CCEEEEEEEccCCCCCCCccEEEEEC
Confidence 23456778887652112 3578873 34442211 23469995 453 5999999876432 2234666676
Q ss_pred CCCCCCEEcccc--cccCCC------CCceeecceEEecCCCCCCeeecccCCceeEEEEEeecCCceeEEEEEE
Q 008686 215 KDFVNWTKAEQS--LYSTNQ------SGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYYTIGT 281 (557)
Q Consensus 215 ~Dl~~W~~~~~~--~~~~~~------~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~~~~~~Y~vG~ 281 (557)
++...+. +.+ +..+.. ....|-|.+++.+ | +++|++|........|.+|-
T Consensus 148 ~~~~~~~--g~~~~i~~p~~~we~~~~~~~EgP~~~k~~--G-------------~yYl~yS~~~~~~~~Y~v~~ 205 (288)
T cd08980 148 SNPWTLT--GPRVLISRPEYDWERQGPGVNEGPAALKRN--G-------------KVFLTYSASGSWTPDYCLGL 205 (288)
T ss_pred CCCCccC--CcceEecCCCCCceecCceeeECcEEEEEC--C-------------EEEEEEECCCCCCCCCEEEE
Confidence 6544443 322 222111 1457999999997 6 88898887544344566654
No 37
>cd08986 GH43_7 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.13 E-value=2.2e-09 Score=109.16 Aligned_cols=174 Identities=14% Similarity=0.097 Sum_probs=111.2
Q ss_pred CccCCcceEEE-CCEEEEEEEEecCC---------CeEEEEEEeCCCCcceecCCCCCCCCC------------cCCCce
Q 008686 60 WMNDPNGPMIY-KGIYHFFYQYKLWD---------TVVWGHSTSTDMVNWTPHDAAIYPSQP------------FDANSC 117 (557)
Q Consensus 60 w~nDPnG~~~~-~G~YHlfyq~~~~g---------~~~Wgha~S~DlvhW~~~~~aL~P~~~------------~d~~gv 117 (557)
|+-||. ++.. +|.|+|+......+ ......++|+||+||+.++.++.+... +...++
T Consensus 1 ~~rDP~-v~~~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~ 79 (269)
T cd08986 1 WIRDTY-VTLGPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAV 79 (269)
T ss_pred CCcCCe-EEecCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCc
Confidence 688996 5555 67999998865211 345779999999999999887754321 235689
Q ss_pred EeeeEEEccCCeEEEEEeeecCC-CcceEEEEEEcCCCCCccceeecCCCC-ceEecCCCCCCCCccCCeEEEecCCCeE
Q 008686 118 WSGSVTILPGGNPAVLYTGIDAG-NKQVQNLAVPKNLSDPYLKEWIKPPEN-PLMVPADQIDPGSFRDPTTAWIGPDKIW 195 (557)
Q Consensus 118 ~SGsav~~~dg~~~l~YTg~~~~-~~~~q~lA~s~d~~d~~l~~w~k~~~~-Pvi~~p~~~~~~~fRDP~V~~~~~~g~~ 195 (557)
|.+.+... +|+++|+|+..... ....+++|++++.. ..|+..... |+ ..-.||.+ |.+++|++
T Consensus 80 WAP~v~~~-~g~yyl~~s~~~~~~~~~~i~va~a~~p~----Gp~~~~~~~~~~---------~~~iD~~~-f~D~DG~~ 144 (269)
T cd08986 80 WAPELHYI-KGRWYLVACMNNPGYGGSSILLSTSGKIE----GPYKHITGNKPL---------FPGIDPSL-FEDDDGKV 144 (269)
T ss_pred CCceEEEE-CCEEEEEEEccCCCCCceEEEEEeCCCCC----CCcEeccCCCCC---------CCccCCce-EEcCCCCE
Confidence 99999875 89999999976532 23456777776543 346653221 11 23479985 55578999
Q ss_pred EEEEeeecCCccEEEEEEeCCCCCCEEcccccccC----CCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeec
Q 008686 196 RVIIGSKINDTGLAILYRSKDFVNWTKAEQSLYST----NQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLS 270 (557)
Q Consensus 196 ~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~----~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~ 270 (557)
||+++.. .+ .--+.|+....-....+... ......|-|.+++.+ | +++|++|..
T Consensus 145 Yl~~~~~-----~i-~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~EgP~i~k~~--G-------------~YYL~yS~~ 202 (269)
T cd08986 145 YLVWHNT-----LI-ARLKDDLSGLAGDPVRIDPSPTFYKDEIGHEGAFVFKYG--G-------------KYYLFGTAW 202 (269)
T ss_pred EEEeeCC-----ce-EeccCccccccCCcEEEecccccccCCccccccEEEEEC--C-------------EEEEEEeec
Confidence 9998753 11 11245554432111111111 012357999999976 5 889998863
No 38
>COG2152 Predicted glycosylase [Carbohydrate transport and metabolism]
Probab=99.10 E-value=2.1e-09 Score=107.55 Aligned_cols=151 Identities=17% Similarity=0.244 Sum_probs=115.3
Q ss_pred ccCCcceEEECCEEEEEEEEe------cCCCeEEEEEEeCCCCc-ceecC-CCCCC-CCCcCCCceEeeeEEEccCCeEE
Q 008686 61 MNDPNGPMIYKGIYHFFYQYK------LWDTVVWGHSTSTDMVN-WTPHD-AAIYP-SQPFDANSCWSGSVTILPGGNPA 131 (557)
Q Consensus 61 ~nDPnG~~~~~G~YHlfyq~~------~~g~~~Wgha~S~Dlvh-W~~~~-~aL~P-~~~~d~~gv~SGsav~~~dg~~~ 131 (557)
.-.| +++..++++||+|+-. .-...|.+.|.|+|+++ |+..+ +.+.| ..++|..||.++.++.. +++++
T Consensus 31 vFNp-av~~~~~~~~~l~Rv~~~yye~~~~~s~l~ia~s~dgi~~~~~e~ep~~~P~~~~~e~~G~EDPRvt~I-~~~y~ 108 (314)
T COG2152 31 VFNP-AVVLVGGELLLLYRVVEGYYEDHSSISHLRIARSDDGIGEFEIEPEPTLWPANYPYEIYGIEDPRVTKI-GGRYY 108 (314)
T ss_pred Eecc-eeEEECCEEEEEEEEeccccccCccceEEEEEecccCCCceecCCcceEecCCCchhhhcccCceEEEE-CCEEE
Confidence 4467 7889999999999983 33467999999999999 98774 67899 66788899999999986 99999
Q ss_pred EEEeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecC---CccE
Q 008686 132 VLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIN---DTGL 208 (557)
Q Consensus 132 l~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~---~~G~ 208 (557)
|.|||.+ +..+..++|+++|. .+|+|. .+++.+ +.||-..+-...+|+|.|+---... ..+-
T Consensus 109 mtYTa~s-~~g~~~~la~t~~f-----~n~~ri--g~i~~p-------dn~~~~lfP~~~ngk~~~lhr~~~~~~~~~~n 173 (314)
T COG2152 109 MTYTAYS-DKGPRLALAVTKDF-----LNWERI--GAIFPP-------DNKDAALFPKKINGKYALLHRPVLGEYGMKGN 173 (314)
T ss_pred EEEEecC-CCCcccchhhhhhh-----hhhhhc--ccccCC-------CCCCceEeeEEecCcEEEEEeecccccCccCc
Confidence 9999986 35677899999884 789995 344432 2355542212247889888654332 2568
Q ss_pred EEEEEeCCCCCCEEcccccc
Q 008686 209 AILYRSKDFVNWTKAEQSLY 228 (557)
Q Consensus 209 i~ly~S~Dl~~W~~~~~~~~ 228 (557)
|++..|.|+.+|.....++.
T Consensus 174 iwia~S~dl~~w~~~~~~l~ 193 (314)
T COG2152 174 IWIAFSPDLEHWGIHRKLLG 193 (314)
T ss_pred eEEEEcCCccCCCccceeec
Confidence 99999999999998765554
No 39
>cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function. This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.07 E-value=2.4e-09 Score=108.69 Aligned_cols=98 Identities=18% Similarity=0.285 Sum_probs=76.7
Q ss_pred eeeEEEccCCeEEEEEeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEec--CCCCCCCCccCCeEEEecCCCeEE
Q 008686 119 SGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVP--ADQIDPGSFRDPTTAWIGPDKIWR 196 (557)
Q Consensus 119 SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~--p~~~~~~~fRDP~V~~~~~~g~~~ 196 (557)
.+.++. .+|+++|||++........+++|+|+|+ .+|++.+ +|++.+ ...++...++||.|+ + .+|+||
T Consensus 2 nP~v~~-~~G~y~l~y~~~~~~~~~~ig~A~S~Dg-----~~~~~~~-~~~i~p~~~~~~~~~gv~dP~v~-~-~~g~y~ 72 (268)
T cd08993 2 NPAVVY-DNGEFYLLYRAAGNDGVIRLGLARSRDG-----LHFEIDP-DPPVWPPPEDGFEEGGVEDPRIV-K-IDDTYY 72 (268)
T ss_pred cCeEEE-ECCEEEEEEEEECCCCceEEEEEEECCC-----ceEEECC-cceEcCCCCCcccccCccCcEEE-E-ECCEEE
Confidence 456666 4999999999876556778999999985 7999975 566543 234556789999965 4 478999
Q ss_pred EEEeeec--CCccEEEEEEeCCCCCCEEccc
Q 008686 197 VIIGSKI--NDTGLAILYRSKDFVNWTKAEQ 225 (557)
Q Consensus 197 m~~ga~~--~~~G~i~ly~S~Dl~~W~~~~~ 225 (557)
|++++.. ....+|.+++|+|+.+|++.+.
T Consensus 73 m~Yta~~~~~~~~~i~lA~S~D~~~W~~~~~ 103 (268)
T cd08993 73 ITYAARPNAPNGTRIGLATTKDFITFERLGT 103 (268)
T ss_pred EEEEccCCCCCCcEEEEEEeCCcceEEEecc
Confidence 9998865 3456899999999999999864
No 40
>cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs
Probab=99.06 E-value=7.5e-09 Score=105.82 Aligned_cols=121 Identities=19% Similarity=0.224 Sum_probs=86.1
Q ss_pred CccCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCCCCCCcCCCceEeeeEEEccCCeEEEEEeeecC
Q 008686 60 WMNDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDA 139 (557)
Q Consensus 60 w~nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~YTg~~~ 139 (557)
..-|| .+++.+|+|+|+.....+ ...+...+|+||+||+.++.++.+. ..++|.+.++. .+|+++|+|+....
T Consensus 14 ~~~DP-~i~~~~~~yY~~~t~~~~-~~gi~i~~S~DL~~W~~~g~~~~~~----~~~~WAP~i~~-~~gkyy~yys~~~~ 86 (280)
T cd09002 14 DYPDP-SILRDGEDYYMTHSSFKY-TPGLVIWHSRDLVNWTPVGPALPEY----EGDVWAPDLCK-YDGRYYIYFPAIPE 86 (280)
T ss_pred CCCCC-EEEEECCEEEEEEcchhc-CCCEEEEECCCcCCceEccccccCC----CCCEEcCeeEE-ECCEEEEEEEeecC
Confidence 34599 578899999997663211 2357888999999999988877542 34789999876 49999999998765
Q ss_pred CCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEee
Q 008686 140 GNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGS 201 (557)
Q Consensus 140 ~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga 201 (557)
.....+.+|++.+.. ..|++ |+... .....||.+++. ++|++||+++.
T Consensus 87 ~~~~~~~va~ad~p~----Gpw~~----~~~~~-----~~~~IDp~vf~D-ddG~~Yl~~~~ 134 (280)
T cd09002 87 GGNWTNMVIWADSPE----GPWSK----PIDLK-----IGGCIDPGHVVD-EDGNRYLFLSG 134 (280)
T ss_pred CCCceEEEEEECCCC----CCCcC----CEecC-----CCCccCCceEEc-CCCCEEEEECC
Confidence 445667889887653 34664 22111 112369996554 78999999864
No 41
>PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A ....
Probab=98.95 E-value=6.7e-08 Score=101.97 Aligned_cols=213 Identities=16% Similarity=0.160 Sum_probs=127.0
Q ss_pred CCCCCCCCCCcccccccCCCCCccC------CcceEE-ECCEEEEEEEEe--------cCCCeEEEEEEeCCCC----cc
Q 008686 39 FSSSITSQPYRTGYHFQPPSSWMND------PNGPMI-YKGIYHFFYQYK--------LWDTVVWGHSTSTDMV----NW 99 (557)
Q Consensus 39 ~~~~~~~~~~rp~yH~~p~~gw~nD------PnG~~~-~~G~YHlfyq~~--------~~g~~~Wgha~S~Dlv----hW 99 (557)
+|+..+.+..-+.+-...+.=|+.| +.|-+. ++|.--+|-... .|+..|+++..|++.. +|
T Consensus 34 ~~~~~tipnI~~~~~~~~~dldVWDsWPLqd~~G~~~~~~Gy~vvfaL~a~r~~~~~~Rh~~A~I~~fY~k~G~~~~~~W 113 (428)
T PF02435_consen 34 YFNASTIPNIPAAFPVMADDLDVWDSWPLQDADGNVVNYNGYQVVFALTADRHEDPDDRHDDARIYLFYSKDGDNANDGW 113 (428)
T ss_dssp SBGGGG----GCGEEECTTE-EEEEEEEEE-TTSSBEEBTTEEEEEEEEE-TT--GGGCSCGEEEEEEEEETT--SGGG-
T ss_pred CCccccCCccCccccccccceeeeccceeecccccEEEECCEEEEEEEecCCccCCccccCCcEEEEEEecCCCCccCCc
Confidence 3444444444445555566667765 444444 478444555544 3678999999999999 99
Q ss_pred eecCCCCCCCCCc-CCCceEeeeEEEcc-CCeEEEEEeeecC--C--CcceE---E--EEEEcCCCCCccceeecCCCCc
Q 008686 100 TPHDAAIYPSQPF-DANSCWSGSVTILP-GGNPAVLYTGIDA--G--NKQVQ---N--LAVPKNLSDPYLKEWIKPPENP 168 (557)
Q Consensus 100 ~~~~~aL~P~~~~-d~~gv~SGsav~~~-dg~~~l~YTg~~~--~--~~~~q---~--lA~s~d~~d~~l~~w~k~~~~P 168 (557)
+..+.++..+... ...--|||||+... ||++.||||.+.. . ..|+. + ++.+.+. ..-+..|+++ ..
T Consensus 114 ~~~G~vf~~g~~~~~~s~EWSGSA~l~~~dg~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~~-~v~i~g~~~~--~~ 190 (428)
T PF02435_consen 114 KNGGPVFPEGASFVPGSREWSGSATLNNDDGSIQLFYTAVGFSDTPTFRQRLATATLGLIHADDD-GVWITGFSNH--HE 190 (428)
T ss_dssp EEEEESS-TTCCCCGCEEEEEEEEEESTTTSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECST-EEEEEEEEEE--EE
T ss_pred eECcccCCCCCCCCccCcEecCceEEcCCCCeEEEEEeecccCCCcchhhhhhhHhcCeeecCCC-ceeEccccce--eE
Confidence 9999877554431 22346999999986 7999999999654 1 22322 1 2222221 1223455553 35
Q ss_pred eEecCCCCC-------CCCccCCeEEEecCCCeEEEEEeeec---C------------------------------CccE
Q 008686 169 LMVPADQID-------PGSFRDPTTAWIGPDKIWRVIIGSKI---N------------------------------DTGL 208 (557)
Q Consensus 169 vi~~p~~~~-------~~~fRDP~V~~~~~~g~~~m~~ga~~---~------------------------------~~G~ 208 (557)
++.++..++ ...||||++|-...+|+-||+.-+.. + ..|+
T Consensus 191 lfe~DG~~Yqt~~Q~~~~afRDP~~f~DP~~G~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~ 270 (428)
T PF02435_consen 191 LFEGDGKHYQTYEQNPGYAFRDPHVFEDPEDGKRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGA 270 (428)
T ss_dssp EES--SSSB--HHHHHH---EEEEEEEETTTTEEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEE
T ss_pred eeccchhhhhChhhcCCccccCCeeEECCCCCcEEEEEecccCCCCCccccCccccccccccccccccccccccceecce
Confidence 555332221 25799999643336889999884322 0 1478
Q ss_pred EEEEEeCC--CCCCEEcccccccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEee
Q 008686 209 AILYRSKD--FVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSL 269 (557)
Q Consensus 209 i~ly~S~D--l~~W~~~~~~~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~ 269 (557)
|.|.+.+| +..|+...+++.+..-....|-|+++.++ | ||+|+.+.
T Consensus 271 iGi~~~~~~~~~~w~~~~PL~~a~~v~de~ERP~iv~~~--g-------------kyYLFt~s 318 (428)
T PF02435_consen 271 IGIAKLTNDDGTVWELLPPLLSANGVNDELERPHIVFMN--G-------------KYYLFTIS 318 (428)
T ss_dssp EEEEEESTTTTSEEEEEEEEEEETTTBS-EEEEEEEEET--T-------------EEEEEEEE
T ss_pred eeeEEecCCCCCccEEeCcceecccccccccCCcEEEEC--C-------------EEEEEEEe
Confidence 99999865 45799987555544445689999999998 7 99988654
No 42
>cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases. The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr
Probab=98.90 E-value=1e-07 Score=95.81 Aligned_cols=201 Identities=19% Similarity=0.351 Sum_probs=128.1
Q ss_pred ccCCCCC---ccCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCC----CCCCcCCCceEeeeEEE-c
Q 008686 54 FQPPSSW---MNDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIY----PSQPFDANSCWSGSVTI-L 125 (557)
Q Consensus 54 ~~p~~gw---~nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~----P~~~~d~~gv~SGsav~-~ 125 (557)
..|+.|| +.||- +++++|+||||-..+. ...|+-+-+. |++|+..+.|+. +.. ...+.|.+.++. .
T Consensus 14 ~~pk~~~~~~lkDPt-iv~~nGkYyvYgT~~~--~~~~~s~~~S-f~~Ws~~g~A~q~~l~~~~--~~~~fwAPqVfyf~ 87 (303)
T cd08987 14 ISPKSDWIVAIKDPT-VVYYNGRYHVYATTAD--AGNYGSMYFN-FTDWSQAASATQYYLQNGN--MTGYRVAPQVFYFA 87 (303)
T ss_pred ccCCCCCeeeecCCe-EEEECCEEEEEEccCC--CCCceeeeec-ccCHhHhccchhhcccCCC--CCcccccCEEeeec
Confidence 4677899 68995 6788999999999762 1234333333 999998886652 222 234578898873 2
Q ss_pred cCCeEEEEEeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCC
Q 008686 126 PGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIND 205 (557)
Q Consensus 126 ~dg~~~l~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~ 205 (557)
+++++||+|+.. ..++|+|.|..+| ..|.. ..|++...........-|+.|+ . ++++.||+... .
T Consensus 88 pk~kwYL~Yq~~------~~~yaTs~dp~~P--~~ws~--~qpl~~~~~~~~~~~~ID~~vI-~-Dd~~~YLff~~---d 152 (303)
T cd08987 88 PQNKWYLIYQWW------PAAYSTNSDISNP--NGWSA--PQPLFSGTPNGSPGGWIDFWVI-C-DDTNCYLFFSD---D 152 (303)
T ss_pred cCCEEEEEEecC------ceEEEeCCCCCCC--CccCC--CcccccCcccCCCCCccceeEE-e-CCCCEEEEEec---C
Confidence 589999999951 1468999998877 46776 4688753222233456899974 3 47788888753 2
Q ss_pred ccEEEEEEeC-CCCCCEEc-cc--cccc-CCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecCCceeEEEEE
Q 008686 206 TGLAILYRSK-DFVNWTKA-EQ--SLYS-TNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYYTIG 280 (557)
Q Consensus 206 ~G~i~ly~S~-Dl~~W~~~-~~--~~~~-~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~~~~~~Y~vG 280 (557)
.| .||+|+ .+.+.... +. .+.. ......+|-|++++++ |. .+++|++++.+..+..|+++
T Consensus 153 nG--~iyra~~~~~nFp~~~~~~~~~~~~~~~~~lfEa~~Vykv~--G~-----------~~YlmiveA~g~~~~rYfrs 217 (303)
T cd08987 153 NG--KLYRSSTTLGNFPNGGTETVIIMSDSNKNNLFEASNVYKVK--GQ-----------NQYLLIVEAIGSDGGRYFRS 217 (303)
T ss_pred CC--eEEEEecchhhCCCCCCccEEEecCCCccccceeeEEEEEC--CC-----------eEEEEEEEecCCCCCCeEEE
Confidence 35 467763 22222110 11 1121 1234689999999998 52 38999999876544568888
Q ss_pred EEecC--CCeEee
Q 008686 281 TYNIT--TDTYIA 291 (557)
Q Consensus 281 ~~d~~--~~~F~~ 291 (557)
+-.. .|+|+|
T Consensus 218 -~Ts~Sl~GpWt~ 229 (303)
T cd08987 218 -WTATSLDGPWTP 229 (303)
T ss_pred -EEcCCCCCCcee
Confidence 4322 345554
No 43
>cd08982 GH43_3 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.88 E-value=9.3e-08 Score=98.51 Aligned_cols=170 Identities=16% Similarity=0.208 Sum_probs=103.1
Q ss_pred cCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCCCCCCcCCCceEeeeEEEccCCeEEEEEeeecCCC
Q 008686 62 NDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAGN 141 (557)
Q Consensus 62 nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~YTg~~~~~ 141 (557)
-||. ++.++|+|+|+-... + ++.+|+||++|+..+.++. ..++|.+++... +|++|++|+..
T Consensus 4 ~DP~-i~~~~g~YY~~~T~~--~----~i~~S~DL~~W~~~g~~~~------~~~~WAP~i~~~-~g~~Y~~~~~~---- 65 (295)
T cd08982 4 ADPV-VILFKGEYYLFASMS--G----GYWHSSDLIDWDFIPTNSL------PDEGYAPAVFVY-DGTLYYTASTY---- 65 (295)
T ss_pred CCCe-EEEECCEEEEEEeCC--C----CeEECCCcCCceECCcccC------CCCcCcCEEEEE-CCEEEEEEeCC----
Confidence 5995 778899999887742 1 3689999999999987764 457999999875 88876655532
Q ss_pred cceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEEEEE--------
Q 008686 142 KQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYR-------- 213 (557)
Q Consensus 142 ~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly~-------- 213 (557)
.+.+|+|.+...+ .|+.. .+ . ......||.++ .+++|+.||++|.+.. +.|.+.+
T Consensus 66 --~~~v~~s~~p~gp---~w~~~--~~----~---~~~~~IDp~vf-~DdDGk~Yl~~g~~~~--~~i~~~eL~~d~~~~ 128 (295)
T cd08982 66 --NSRIYKTADPLSG---PWEEV--DK----S---FPPGLADPALF-IDDDGRLYLYYGCSNN--YPLRGVEVDPDTFRP 128 (295)
T ss_pred --CceEEEeCCCCCC---Ccccc--cc----c---cCCCccCCceE-ECCCCCEEEEEecCCC--CCeEEEEECcccCCc
Confidence 2357887765321 35432 01 0 11345799964 4468999999875321 1122222
Q ss_pred ----------eCCCCCCEEcccccccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecCCceeEEEEEE
Q 008686 214 ----------SKDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYYTIGT 281 (557)
Q Consensus 214 ----------S~Dl~~W~~~~~~~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~~~~~~Y~vG~ 281 (557)
+..-..|+..+.-..........|-|-+++-+ | +++|++|........|.+|-
T Consensus 129 ~g~~~~l~~~~~~~~~We~~g~~~~~~~~~~~~EGP~i~k~~--G-------------~YYL~yS~~~~~~~~Y~v~~ 191 (295)
T cd08982 129 IGEPVELIPGNPDKHGWERFGENNDNPDKTPWMEGAWMTKHN--G-------------KYYLQYAAPGTEFNTYADGV 191 (295)
T ss_pred cCcceEEEeCCCCCcCeEecCcccccccCCccccccEEEEEC--C-------------EEEEEEeCCCcccCcEeEEE
Confidence 22223455433211101123357888888866 5 88888886543334455553
No 44
>cd08995 GH32_Aec43_like Glycosyl hydrolase family 32. This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a
Probab=98.68 E-value=6.5e-07 Score=91.30 Aligned_cols=130 Identities=21% Similarity=0.243 Sum_probs=88.5
Q ss_pred ccCCcceEEECCEEEEEEEEe-cC--CCeEEEEEEeCCCCcceecC--CCCCCCCCcCCCceEeeeEEEcc-CCeEEEEE
Q 008686 61 MNDPNGPMIYKGIYHFFYQYK-LW--DTVVWGHSTSTDMVNWTPHD--AAIYPSQPFDANSCWSGSVTILP-GGNPAVLY 134 (557)
Q Consensus 61 ~nDPnG~~~~~G~YHlfyq~~-~~--g~~~Wgha~S~DlvhW~~~~--~aL~P~~~~d~~gv~SGsav~~~-dg~~~l~Y 134 (557)
+-.|+ ++..+|+|||||..+ .. .....++|+|+|+++|++.+ +.+.+...++...+-.+.++.++ +|+++|+|
T Consensus 62 ~~sgs-~~~~~g~~~l~YTg~~~~~~~~~~i~~A~S~D~~~w~k~~~~pv~~~~~~~~~~~~rDP~Vf~~~~~g~y~m~~ 140 (280)
T cd08995 62 IGTGS-VIKGEGTYHAFYTGHNLDGKPKQVVMHATSDDLITWTKDPEFILIADGEGYEKNDWRDPFVFWNEEEGCYWMLL 140 (280)
T ss_pred ceEeE-EEeeCCEEEEEEEEECCCCCCcEEEEEEECCCCCccEECCCCeecCCccccccCCccCCcEEEcCCCCeEEEEE
Confidence 44564 567899999999987 32 35679999999999999875 33432333444445577777653 58999999
Q ss_pred eeecC----CCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeec
Q 008686 135 TGIDA----GNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI 203 (557)
Q Consensus 135 Tg~~~----~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~ 203 (557)
.+... .....+.++.|+| |++|+.. ++++.+.. ...+.-|.+ ++ .+|+|+|+++.+.
T Consensus 141 g~~~~~~~~~~~g~i~~~~S~D-----l~~W~~~--~~~~~~~~---~~~~E~P~l-~~-~~g~~~L~~s~~~ 201 (280)
T cd08995 141 ATRLLDGPYNRRGCIALFTSKD-----LKNWEYE--EPFYAPGL---YFMPECPDL-FK-MGDWWYLVYSEFS 201 (280)
T ss_pred EeccCCCCCCCCeEEEEEEeCC-----cCcceec--CceecCCC---cceeecceE-EE-ECCEEEEEEEecc
Confidence 87643 2334566777877 4799874 46654322 234678884 45 5789999998764
No 45
>cd08999 GH43_ABN_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=98.63 E-value=1.5e-06 Score=88.64 Aligned_cols=153 Identities=13% Similarity=0.105 Sum_probs=99.3
Q ss_pred ccCCcceEEECCEEEEEEEEecC--CCeEEEEEEeCCCC-cceecCCCC-C-CCCCcCCCceEeeeEEEccCCeEEEEEe
Q 008686 61 MNDPNGPMIYKGIYHFFYQYKLW--DTVVWGHSTSTDMV-NWTPHDAAI-Y-PSQPFDANSCWSGSVTILPGGNPAVLYT 135 (557)
Q Consensus 61 ~nDPnG~~~~~G~YHlfyq~~~~--g~~~Wgha~S~Dlv-hW~~~~~aL-~-P~~~~d~~gv~SGsav~~~dg~~~l~YT 135 (557)
+..| -+++++|+|||||..+.. ....+++|+|+|.. .|+..+..+ . +.. ..++..++++.++||++||+|.
T Consensus 62 ~waP-~v~~~~g~y~~~y~~~~~~~~~~~i~~a~s~~p~g~~~~~~~~~~~~~~~---~~~~~Dp~v~~d~dG~~Yl~~~ 137 (287)
T cd08999 62 FWAP-DVSYVNGKYVLYYSARDKGSGGQCIGVATADSPLGPFTDHGKPPLCCPEG---EGGAIDPSFFTDTDGKRYLVWK 137 (287)
T ss_pred ccCc-eEEEECCEEEEEEEeecCCCCCEEEEEEECCCCCCCCccCCcceEecCCC---CCCccCCCeEECCCCCEEEEEe
Confidence 5567 478899999999998833 46789999999975 999875432 2 222 2346778888876899999997
Q ss_pred eecCC--CcceEEEE-EEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeec--CC--ccE
Q 008686 136 GIDAG--NKQVQNLA-VPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI--ND--TGL 208 (557)
Q Consensus 136 g~~~~--~~~~q~lA-~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~--~~--~G~ 208 (557)
+.... ..+.+.++ .+.|. .+|... ...++.+...+....+.-|.+ ++ .+|+|||++.+.. .. .=+
T Consensus 138 ~~~~~~~~~~~i~~~~ls~d~-----~~~~~~-~~~i~~~~~~~~~~~~EgP~i-~k-~~g~yyl~~S~~~~~~~~~~y~ 209 (287)
T cd08999 138 SDGNSIGKPTPIYLQELSADG-----LTLTGE-PVRLLRNDEDWEGPLVEAPYL-VK-RGGYYYLFYSAGGCCSGASTYA 209 (287)
T ss_pred ccCCCCCCCceEEEEEeCCCC-----ccccCC-cEeeecccccccCCceEeeEE-EE-ECCEEEEEEEcCCccCCCCCEE
Confidence 64321 12224444 44442 566542 223433322233345778985 45 4899999997653 21 235
Q ss_pred EEEEEeCCCC-CCEEccc
Q 008686 209 AILYRSKDFV-NWTKAEQ 225 (557)
Q Consensus 209 i~ly~S~Dl~-~W~~~~~ 225 (557)
+.+++|+++. .|+....
T Consensus 210 i~~~~s~~~~Gpw~~~~~ 227 (287)
T cd08999 210 VGVARSKSLLGPYVKAPG 227 (287)
T ss_pred EEEEEeCCCcCCcCCCCC
Confidence 7889999986 7887543
No 46
>cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of
Probab=98.59 E-value=5.1e-06 Score=84.54 Aligned_cols=150 Identities=11% Similarity=0.040 Sum_probs=96.9
Q ss_pred CCccCCcceEEECCEEEEEEEEe-cCCCeEEEEEEeCCCC-cceecCCC-CCCCCCcCCCceEeeeEEEccCCeEEEEEe
Q 008686 59 SWMNDPNGPMIYKGIYHFFYQYK-LWDTVVWGHSTSTDMV-NWTPHDAA-IYPSQPFDANSCWSGSVTILPGGNPAVLYT 135 (557)
Q Consensus 59 gw~nDPnG~~~~~G~YHlfyq~~-~~g~~~Wgha~S~Dlv-hW~~~~~a-L~P~~~~d~~gv~SGsav~~~dg~~~l~YT 135 (557)
+-+..|. +++++|+|||||... ..+....++|+|+|.. .|+..... +.+ ...+...+.+++++.++||+++|+|.
T Consensus 62 ~~~wAP~-i~~~~g~yy~yy~~~~~~~~~~igva~s~~p~Gpw~~~~~~~~~~-~~~~~~~~iDp~vf~d~dG~~yl~~~ 139 (274)
T cd08990 62 GQAWAPD-VVEKNGKYYLYFPARDKDGGFAIGVAVSDSPAGPFKDAGGPILIT-TPSGGWYSIDPAVFIDDDGQAYLYWG 139 (274)
T ss_pred CCcCcCe-EEEECCEEEEEEEeecCCCceEEEEEEeCCCCCCCCCCCCccccc-cCCCCCCccCCcEEECCCCCEEEEEC
Confidence 4466785 788999999999987 3346789999999977 89987543 332 22233456788888876899999998
Q ss_pred eecCCCcceEEEE-EEcCCCCCccceeecCCCCceEecC---CCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEEE
Q 008686 136 GIDAGNKQVQNLA-VPKNLSDPYLKEWIKPPENPLMVPA---DQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAIL 211 (557)
Q Consensus 136 g~~~~~~~~q~lA-~s~d~~d~~l~~w~k~~~~Pvi~~p---~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~l 211 (557)
+. +.+.++ .+.| +.+|+.. ..++..+ .......+.=|.+ ++ .+|+|||++.+.. ...+.+
T Consensus 140 ~~-----~~~~~~~l~~d-----~~~~~~~--~~~i~~~~~~~~~~~~~~EgP~i-~k-~~G~YYl~yS~~~--~~~~~~ 203 (274)
T cd08990 140 GG-----LGLRVAKLKPD-----MLSLKGE--PVEIVITDGAGDELRRFFEAPWV-HK-RNGTYYLSYSTGD--PEEIAY 203 (274)
T ss_pred Cc-----CCEEEEEeCcc-----ccccCCC--cEEEEeccccCCCCCCcccceeE-EE-ECCEEEEEEECCC--CcEEEE
Confidence 64 223444 3333 3567642 2233211 1111223457874 45 5899999998743 456778
Q ss_pred EEeCCCC-CCEEcccc
Q 008686 212 YRSKDFV-NWTKAEQS 226 (557)
Q Consensus 212 y~S~Dl~-~W~~~~~~ 226 (557)
.+|+++. -|+..+.+
T Consensus 204 a~s~~p~GP~~~~g~~ 219 (274)
T cd08990 204 ATSDSPLGPFTYRGVI 219 (274)
T ss_pred EEcCCCCCCcccCcEE
Confidence 8888874 57765543
No 47
>cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=98.56 E-value=7.4e-06 Score=84.07 Aligned_cols=152 Identities=14% Similarity=0.119 Sum_probs=93.7
Q ss_pred CccCCcceEEECCEEEEEEEEe-cC-CCeEEEEEEeCCCC-cceecCCCCCCCCCcCCCceEeeeEEEccCCeEEEEEee
Q 008686 60 WMNDPNGPMIYKGIYHFFYQYK-LW-DTVVWGHSTSTDMV-NWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTG 136 (557)
Q Consensus 60 w~nDPnG~~~~~G~YHlfyq~~-~~-g~~~Wgha~S~Dlv-hW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~YTg 136 (557)
.+..| -+++.+|+|||||... .+ ....+++|+|+|.. .|+..+..+.+.. .....++++.++||++||+|+.
T Consensus 54 ~~waP-~v~~~~g~yyl~ys~~~~~~~~~~i~~a~s~~p~gp~~~~~~~~~~~~----~~~iD~~vf~d~dG~~yl~~~~ 128 (294)
T cd08991 54 GFWAP-EVYYYNGKFYMYYSANDRDEKTEHIGVAVSDSPLGPFRDIKKPPIDFE----PKSIDAHPFIDDDGKPYLYYSR 128 (294)
T ss_pred cEEcc-EEEEECCEEEEEEEeccCCCCcceEEEEEeCCCCCCCCcCCCCcccCC----CcccCCceEECCCCCEEEEEEe
Confidence 45578 4889999999999987 22 46789999999987 8887654433322 2356789988767999999986
Q ss_pred ecCCC--cceEEEEEEcCCCCCccceeecCCCC---ceEec-------C-C---CCCCCCccCCeEEEecCCCeEEEEEe
Q 008686 137 IDAGN--KQVQNLAVPKNLSDPYLKEWIKPPEN---PLMVP-------A-D---QIDPGSFRDPTTAWIGPDKIWRVIIG 200 (557)
Q Consensus 137 ~~~~~--~~~q~lA~s~d~~d~~l~~w~k~~~~---Pvi~~-------p-~---~~~~~~fRDP~V~~~~~~g~~~m~~g 200 (557)
..... ......+.+.|. .+|...... |+..+ + . ..+.....-|.+ ++ .+|+|||++.
T Consensus 129 ~~~~~~~~~i~~~~l~~d~-----~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~-~k-~~g~yyl~ys 201 (294)
T cd08991 129 NNYGNRVSDIYGTELVDDK-----LSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTV-LK-HNGRYYLTYS 201 (294)
T ss_pred cCCCCcccceEEEEEccce-----eeeccceeeccccccccccccccccccccccccCceeeCcEE-EE-ECCEEEEEEE
Confidence 54321 123344555553 455421111 11111 0 0 011123456774 44 4789999987
Q ss_pred eec-C-CccEEEEEEeCCC-CCCEEc
Q 008686 201 SKI-N-DTGLAILYRSKDF-VNWTKA 223 (557)
Q Consensus 201 a~~-~-~~G~i~ly~S~Dl-~~W~~~ 223 (557)
+.. . ..-.+.+++|+++ -.|+..
T Consensus 202 ~~~~~~~~y~~~~a~s~~~~gp~~~~ 227 (294)
T cd08991 202 ANHYENEDYGVGYATADSPLGPWTKY 227 (294)
T ss_pred CCCCCCCCceEEEEEcCCCCCCcEec
Confidence 543 1 1125778888874 679875
No 48
>cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F. This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma
Probab=98.52 E-value=3.5e-06 Score=84.73 Aligned_cols=155 Identities=14% Similarity=0.101 Sum_probs=98.5
Q ss_pred CCCccCCcceEEECCEEEEEEEEe--cCCCeEEEEEEeCCCCcceecCCCCCCCCCcCCCceEeeeEEEccCCeEEEEEe
Q 008686 58 SSWMNDPNGPMIYKGIYHFFYQYK--LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYT 135 (557)
Q Consensus 58 ~gw~nDPnG~~~~~G~YHlfyq~~--~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~YT 135 (557)
.+.+.+|. +++++|+|||||... .....+.+.|+|+|+.+|....... +... ...++..++++.++||++||+|.
T Consensus 56 ~~~~waP~-v~~~~g~yyl~y~~~~~~~~~~~i~~a~s~d~~g~~~~~~~~-~~~~-~~~~~iDp~vf~d~dg~~yl~~~ 132 (271)
T cd08978 56 SGGLWAPE-VIYYEGKYYLYYSVSDFDYNGSGIGVATSEDPTGPFEDKVIR-PPTS-NNGNSIDPTVFKDDDGKYYLYYG 132 (271)
T ss_pred CCceeCCe-EEEECCEEEEEEEcccCCCCcccEEEEECCCCCCCccccccC-cCcc-CCCCccCcceEEcCCCCEEEEEe
Confidence 45678995 788999999999987 2346789999999999997654211 1111 22457889999876699999998
Q ss_pred eecCC-CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecC--CccEEEEE
Q 008686 136 GIDAG-NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIN--DTGLAILY 212 (557)
Q Consensus 136 g~~~~-~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~--~~G~i~ly 212 (557)
+.... ....+.++.+.+. ..+.. ..+++..........+..|.+ ++ .+|+|||++.+... ..-.+.++
T Consensus 133 ~~~~~~~~~~i~~~~l~~~-----~~~~~--~~~~~~~~~~~~~~~~EgP~~-~k-~~g~yyl~ys~~~~~~~~y~~~~~ 203 (271)
T cd08978 133 SGDPGAGFGGIYISELTDD-----LTKPT--GPPVLSASSGNNNAVTEGPTI-FK-KNGYYYLTYSANGTGDYGYNIGYA 203 (271)
T ss_pred cccCCCCCCcEEEEEECcc-----ccccc--CCceeeeeeccCCCceEccEE-EE-ECCEEEEEEEeCCCCCCCceEEEE
Confidence 76421 2334556665543 12222 223321111112235678985 45 47899999876542 23467888
Q ss_pred EeCCCC-CCEEcc
Q 008686 213 RSKDFV-NWTKAE 224 (557)
Q Consensus 213 ~S~Dl~-~W~~~~ 224 (557)
+|++.. -|+..+
T Consensus 204 ~s~~~~Gp~~~~~ 216 (271)
T cd08978 204 TSDSIDGPYVKKG 216 (271)
T ss_pred ECCCCCCCcCcCC
Confidence 898864 466543
No 49
>PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety. On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B.
Probab=98.49 E-value=8.9e-07 Score=91.86 Aligned_cols=103 Identities=17% Similarity=0.290 Sum_probs=80.5
Q ss_pred CCceEeeeEEEccCCe--EEEEEeeecCCCcc-eEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEec
Q 008686 114 ANSCWSGSVTILPGGN--PAVLYTGIDAGNKQ-VQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIG 190 (557)
Q Consensus 114 ~~gv~SGsav~~~dg~--~~l~YTg~~~~~~~-~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~ 190 (557)
...||.+.|++. +|. ++|+|.+....... .+++|.|.|+ ++|++. .+||+.|...++.....||-|+..
T Consensus 29 ~~~vfNpgai~~-~~~~R~~l~yr~~~~~~~~~~iglA~S~DG-----i~f~~~-~~pil~P~~~~e~~GvEDPRVt~i- 100 (312)
T PF04041_consen 29 PNAVFNPGAIVF-DGGLRVYLLYRAYGSDIGSSRIGLARSDDG-----IHFERD-PEPILYPDTDYEEWGVEDPRVTKI- 100 (312)
T ss_dssp SSEEEEEEEEEE-TTE--EEEEEEEEESSSSEEEEEEEEESSS-----SS-EE--SS-SBEE-SSTTHTEEEEEEEEEE-
T ss_pred cceEEcCcEEEE-CCeeEEEEEEEeECCCCceeEEEEEEccCC-----cCceEC-CCCEEccCCCCcccCccceeEEEE-
Confidence 456999999875 555 89999887665444 8999999996 689886 479997766667778999997755
Q ss_pred CCCeEEEEEeeecCCccEEEEEEeCCCCCCEEccc
Q 008686 191 PDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQ 225 (557)
Q Consensus 191 ~~g~~~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~ 225 (557)
+++|||++.+......++.+.+|+|+.+|+..+.
T Consensus 101 -~d~yymtYta~~~~~~~~~la~s~D~~~~~r~g~ 134 (312)
T PF04041_consen 101 -DDTYYMTYTAYSGKGPRIGLATSKDFKHWERHGK 134 (312)
T ss_dssp -TTEEEEEEEEEESSSEEEEEEEESSSSSEEEEEC
T ss_pred -CCEEEEEEEEecCCCcccceEEccchHhhEEecc
Confidence 6799999988776566889999999999999874
No 50
>cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68. Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32
Probab=98.41 E-value=8.8e-06 Score=82.20 Aligned_cols=155 Identities=14% Similarity=0.109 Sum_probs=101.3
Q ss_pred CCccCCcceEEEC-CEEEEEEEEec--CCCeEEEEEEeCCCCc-ceecC-CCCCCCC--CcCCCceEeeeEEEccCCeEE
Q 008686 59 SWMNDPNGPMIYK-GIYHFFYQYKL--WDTVVWGHSTSTDMVN-WTPHD-AAIYPSQ--PFDANSCWSGSVTILPGGNPA 131 (557)
Q Consensus 59 gw~nDPnG~~~~~-G~YHlfyq~~~--~g~~~Wgha~S~Dlvh-W~~~~-~aL~P~~--~~d~~gv~SGsav~~~dg~~~ 131 (557)
+-+..|. +++.+ |+|+|||.... .+....+.|+|+|+.. |++.. ..+.+.. ..+...+.+++++.++||+++
T Consensus 58 ~~~wap~-v~~~~~g~~~l~yt~~~~~~~~~~i~~a~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~~d~dG~~y 136 (286)
T cd08772 58 GGIWAPS-IVYIENGKFYLYYTDVSFTKNQQTIGVATAEDGNGPWTDYIGGPVLPDNPPAADVSNFRDPFVFEDDDGKWY 136 (286)
T ss_pred CcEecce-EEEcCCCCEEEEEEeecCCCCceeEEEEEcCCCCCCCccccccccccCCCCccccccccCCeEEEcCCCCEE
Confidence 3466885 66777 99999999872 3577899999999975 56442 1122321 223346788999887569999
Q ss_pred EEEeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeec----CCcc
Q 008686 132 VLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI----NDTG 207 (557)
Q Consensus 132 l~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~----~~~G 207 (557)
|+|.+........+.+|.|+|. .+|++....+++.... ....+.-|.++ + .+|+|||++.+.. ...-
T Consensus 137 ~~~~~~~~~~~~~i~~~~s~d~-----~~w~~~~~~~~~~~~~--~~~~~E~P~~~-~-~~g~~yL~~s~~~~~~~~~~y 207 (286)
T cd08772 137 LVFGSGDHHNFGGIFLYESDDD-----TTWKKGSAELLISEGE--GGKQIEGPGLL-K-KNGKYYLFYSINGTGRVDSTY 207 (286)
T ss_pred EEEccccCCCCCeEEEEEcCCC-----CCcccccceeeEeecc--CCCceeccEEE-E-ECCEEEEEEEcCCCcCCCCCc
Confidence 9998765333456788988874 6787653222232221 23467889854 4 4789999997754 1233
Q ss_pred EEEEEEeCC-CCCCEEc
Q 008686 208 LAILYRSKD-FVNWTKA 223 (557)
Q Consensus 208 ~i~ly~S~D-l~~W~~~ 223 (557)
++.+++|++ +-.|+..
T Consensus 208 ~~~~~~~~~~~g~~~~~ 224 (286)
T cd08772 208 SIGYARSESDTGPYVPK 224 (286)
T ss_pred ceEEEEccCCCCCcccC
Confidence 567778865 3456544
No 51
>cd08986 GH43_7 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.35 E-value=4.5e-06 Score=84.85 Aligned_cols=121 Identities=16% Similarity=0.119 Sum_probs=73.2
Q ss_pred ccCCeEEEecCCCeEEEEEeeecC---------CccEEEEEEeCCCCCCEEcccccccCC--------------CCCcee
Q 008686 181 FRDPTTAWIGPDKIWRVIIGSKIN---------DTGLAILYRSKDFVNWTKAEQSLYSTN--------------QSGMWE 237 (557)
Q Consensus 181 fRDP~V~~~~~~g~~~m~~ga~~~---------~~G~i~ly~S~Dl~~W~~~~~~~~~~~--------------~~~~~E 237 (557)
+|||+|+.. .+|.|||+..+... ..+.|.+|+|+||.+|+..+..+.... .....+
T Consensus 2 ~rDP~v~~~-~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~W 80 (269)
T cd08986 2 IRDTYVTLG-PDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAVW 80 (269)
T ss_pred CcCCeEEec-CCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCcC
Confidence 799996544 57788888765431 134689999999999999875442211 123556
Q ss_pred ecceEEecCCCCCCeeecccCCceeEEEEEeecCC--ceeEEEEEEEecCCCeEeecCCccCCCCccccccCCCccceee
Q 008686 238 CPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNY--QQDYYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGKFYGSKTF 315 (557)
Q Consensus 238 CPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~~--~~~~Y~vG~~d~~~~~F~~~~~~~~~~~~~~lD~G~fYA~qt~ 315 (557)
+|+++.++ | +|+|.++.... ......+..-+...+.|+..... ..+ ..-.-+..|
T Consensus 81 AP~v~~~~--g-------------~yyl~~s~~~~~~~~~~i~va~a~~p~Gp~~~~~~~------~~~--~~~iD~~~f 137 (269)
T cd08986 81 APELHYIK--G-------------RWYLVACMNNPGYGGSSILLSTSGKIEGPYKHITGN------KPL--FPGIDPSLF 137 (269)
T ss_pred CceEEEEC--C-------------EEEEEEEccCCCCCceEEEEEeCCCCCCCcEeccCC------CCC--CCccCCceE
Confidence 99999997 6 88888886431 12223333333334566532110 001 113446788
Q ss_pred eeCCCCcEEEE
Q 008686 316 FDSAKNRRILW 326 (557)
Q Consensus 316 ~d~~~gr~i~~ 326 (557)
.|. +|+..|+
T Consensus 138 ~D~-DG~~Yl~ 147 (269)
T cd08986 138 EDD-DGKVYLV 147 (269)
T ss_pred EcC-CCCEEEE
Confidence 875 6877775
No 52
>cd08983 GH43_4 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.32 E-value=2.6e-06 Score=86.98 Aligned_cols=89 Identities=20% Similarity=0.323 Sum_probs=63.8
Q ss_pred CCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeec-----CCccEEEEEEeCCCCCCEEcccccccCC-CCCceeec
Q 008686 166 ENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI-----NDTGLAILYRSKDFVNWTKAEQSLYSTN-QSGMWECP 239 (557)
Q Consensus 166 ~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~-----~~~G~i~ly~S~Dl~~W~~~~~~~~~~~-~~~~~ECP 239 (557)
++||+.+..+ ...+|||+|++..++|+|||+..... .....|.+++|+||.+|+..+..+.... .+.+| ||
T Consensus 5 ~~pvl~~~~g--~~~~rDP~I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~~~~~~W-AP 81 (276)
T cd08983 5 GNPVLTSTAG--TKGLRDPFILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPPNAGNTW-AP 81 (276)
T ss_pred CceEEeCCcC--CCCccCCeEEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCCCcCcEe-Cc
Confidence 5899986433 57899999876546789999876542 1223689999999999998875432222 34466 99
Q ss_pred ceEEecCCCCCCeeecccCCceeEEEEEeec
Q 008686 240 DFFPVSTKSPKGVDTSVIGPNIKHVLKVSLS 270 (557)
Q Consensus 240 dlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~ 270 (557)
++|..+..| +|+|.+|..
T Consensus 82 ev~~d~~~g-------------~y~~~~s~~ 99 (276)
T cd08983 82 EAFWDAERG-------------QYVVYWSSR 99 (276)
T ss_pred cceEcCCCC-------------eEEEEEecc
Confidence 999986434 888888864
No 53
>cd08998 GH43_ABN_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=98.27 E-value=3.6e-05 Score=78.89 Aligned_cols=152 Identities=15% Similarity=0.110 Sum_probs=93.7
Q ss_pred CCCccCCcceEEECCEEEEEEEEec-C-CCeEEEEEEeCCC--CcceecCCCCCCCCCcCCCceEeeeEEEccCCeEEEE
Q 008686 58 SSWMNDPNGPMIYKGIYHFFYQYKL-W-DTVVWGHSTSTDM--VNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVL 133 (557)
Q Consensus 58 ~gw~nDPnG~~~~~G~YHlfyq~~~-~-g~~~Wgha~S~Dl--vhW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~ 133 (557)
.+-+..|. +++.+|+|||||..+. . .....++|+|+|+ -.|+..++++.+........+..++++.++||++||+
T Consensus 55 ~~~~wAP~-v~~~~g~yyl~ys~~~~~~~~~~i~va~s~~~~~gpw~~~~~v~~~~~~~~~~~~iDp~vf~d~dG~~Yl~ 133 (288)
T cd08998 55 SGNLWAPD-VIYLNGKYYLYYSVSTFGSNRSAIGLATSDTLPDGPWTDHGIVIESGPGRDDPNAIDPNVFYDEDGKLWLS 133 (288)
T ss_pred CCCccCCe-EEEECCEEEEEEEEEeCCCCceEEEEEEeCCCCCCCCEEcceeeecCCCCCCcccccCCEEEcCCCCEEEE
Confidence 34466784 7788999999999882 2 3667899999999 7999887666554322334567889988778999999
Q ss_pred EeeecCCCcceEEEEE-EcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeec-C---Ccc-
Q 008686 134 YTGIDAGNKQVQNLAV-PKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI-N---DTG- 207 (557)
Q Consensus 134 YTg~~~~~~~~q~lA~-s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~-~---~~G- 207 (557)
|.+.. ..+.++. +.|.+.+ ..+... ...++..+. .......|++ ++ .+|.|||++.+.. . ..+
T Consensus 134 ~~~~~----~~i~~~~l~~~~~~~--~~~~~~-~~~i~~~~~--~~~~~Egp~~-~k-~~g~YYl~~S~~~~~~~~~~~y 202 (288)
T cd08998 134 FGSFW----GGIFLVELDPKTGKP--LYPGGY-GYNIAGRPR--GHGAIEAPYI-IY-RGGYYYLFVSYGGCCAGEDSTY 202 (288)
T ss_pred eeecc----CCEEEEEeCcccCCc--cCCCCc-ceEEeccCC--CCCceeeeEE-EE-eCCEEEEEEEcchhcCCCCCce
Confidence 97542 1123332 2332211 122110 111222221 1234578985 45 5899999986532 1 122
Q ss_pred EEEEEEeCCCC-CCE
Q 008686 208 LAILYRSKDFV-NWT 221 (557)
Q Consensus 208 ~i~ly~S~Dl~-~W~ 221 (557)
++.+++|+++. -|+
T Consensus 203 ~v~~~~s~~~~GP~~ 217 (288)
T cd08998 203 NIRVGRSKSITGPYV 217 (288)
T ss_pred EEEEEEcCCCCCCcC
Confidence 67899998864 355
No 54
>cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases. Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal
Probab=98.22 E-value=1.4e-05 Score=82.29 Aligned_cols=129 Identities=15% Similarity=0.113 Sum_probs=88.6
Q ss_pred CCcceEEEC-CEEEEEEEEec----CCCeEEEEEEeC-CCCcceecCCC-CCCCCCcCCCceEeeeEEEccCCeEEEEEe
Q 008686 63 DPNGPMIYK-GIYHFFYQYKL----WDTVVWGHSTST-DMVNWTPHDAA-IYPSQPFDANSCWSGSVTILPGGNPAVLYT 135 (557)
Q Consensus 63 DPnG~~~~~-G~YHlfyq~~~----~g~~~Wgha~S~-DlvhW~~~~~a-L~P~~~~d~~gv~SGsav~~~dg~~~l~YT 135 (557)
.++ ++..+ |+|+|||..+. .+....++|+|+ |+++|++.+.. +.+....+..+.-++.++.. +|+++|+|+
T Consensus 65 sGs-av~~~~g~~~~~YTg~~~~~~~~~~~~~lA~S~ddg~~w~k~~~~~~~~~~~~~~~~~RDP~V~~~-~g~~~m~~g 142 (298)
T cd08996 65 SGS-AVVDDNGKLVLFYTGNVKLDGGRRQTQCLAYSTDDGRTFTKYEGNPVIPPPDGYTTHFRDPKVFWH-DGKWYMVLG 142 (298)
T ss_pred eCe-EEEcCCCcEEEEEeceeCCCCCceEEEEEEEEcCCCCEEEECCCCceEcCCCCCCCcccCCeEEeE-CCEEEEEEE
Confidence 443 33456 99999999872 346788999999 89999987532 22112233455678888875 799999999
Q ss_pred eecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCC--CeEEEEEeeec
Q 008686 136 GIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPD--KIWRVIIGSKI 203 (557)
Q Consensus 136 g~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~--g~~~m~~ga~~ 203 (557)
+...+....+.++.|+| |++|+.. .++...... ....+.-|.+ ++ .+ ++|+|+++.+.
T Consensus 143 ~~~~~~~~~i~ly~S~D-----l~~W~~~--~~~~~~~~~-~~~~~EcP~l-~~-l~~~~k~vL~~s~~~ 202 (298)
T cd08996 143 AGTEDGTGRILLYRSDD-----LKNWEYL--GELLTSLGD-FGYMWECPDL-FP-LDVEGKWVLIFSPQG 202 (298)
T ss_pred EEecCCCcEEEEEECCC-----CCCCEEc--ceecccCCC-ccceEeCCcE-EE-ECCCCeEEEEECCCC
Confidence 87654456678888887 4799974 344322111 2346789985 44 46 89999998764
No 55
>cd08981 GH43_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.16 E-value=3e-05 Score=79.85 Aligned_cols=124 Identities=10% Similarity=0.088 Sum_probs=76.0
Q ss_pred CCccCCeEEEecCCCeEEEEEeeecCC----ccEEEEEEeCCCCCCEEcccccccCC---CCCceeecceEEecCCCCCC
Q 008686 179 GSFRDPTTAWIGPDKIWRVIIGSKIND----TGLAILYRSKDFVNWTKAEQSLYSTN---QSGMWECPDFFPVSTKSPKG 251 (557)
Q Consensus 179 ~~fRDP~V~~~~~~g~~~m~~ga~~~~----~G~i~ly~S~Dl~~W~~~~~~~~~~~---~~~~~ECPdlf~l~~~g~~~ 251 (557)
..+|||+|++.+++|.|||+..+.... ...+.+|+|+||.+|+..+..+.... ......+|+++..+ |
T Consensus 4 ~~~~DP~v~~~~~~g~yYl~~T~~~~~~~~~~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~~~~--G--- 78 (291)
T cd08981 4 IRIRDPFILADPETGTYYLYGTTDPNIWGGEGTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVHEYK--G--- 78 (291)
T ss_pred ccccCCEEEEECCCCEEEEEEecCccccccCCCcEEEEECCChhcccccceeeccCCCcCccccccCCeeeeeC--C---
Confidence 468999987765689999997664321 12479999999999999875443221 12357899999887 6
Q ss_pred eeecccCCceeEEEEEeecCCc----eeEEEEEEEecCCCeEeecCCccCCCCccccccCC-CccceeeeeCCCCcEEEE
Q 008686 252 VDTSVIGPNIKHVLKVSLSNYQ----QDYYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGK-FYGSKTFFDSAKNRRILW 326 (557)
Q Consensus 252 ~~~~~~~~~~~~vl~~s~~~~~----~~~Y~vG~~d~~~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d~~~gr~i~~ 326 (557)
+|+|.++..... ...+++.+ ...++|+..... .....+. ..-|..|.|. +|+..|+
T Consensus 79 ----------~yyly~s~~~~~~~~~~~~va~s~--~p~GP~~~~~~~------~~~~~~~~~iDp~~f~Dd-DG~~Yl~ 139 (291)
T cd08981 79 ----------RYYMFATFHNPGGERRGTAILVSD--SPEGPFVPHSDG------PVTPEDWMCLDGTLYVDE-DGKPWMV 139 (291)
T ss_pred ----------EEEEEEEeccCCCceeeEEEEECC--CCCCCCEeCCCC------ccCCCCCceEcCceEEcC-CCCEEEE
Confidence 888888764322 22333332 233455422100 0111122 4556678875 6888775
No 56
>cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=98.06 E-value=0.00029 Score=71.63 Aligned_cols=141 Identities=10% Similarity=0.087 Sum_probs=87.9
Q ss_pred ccCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCC-ccee-cC-CCCCCCCCcCCCceEeeeEEEccCCeEEEEEeee
Q 008686 61 MNDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMV-NWTP-HD-AAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGI 137 (557)
Q Consensus 61 ~nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~Dlv-hW~~-~~-~aL~P~~~~d~~gv~SGsav~~~dg~~~l~YTg~ 137 (557)
+.-|. +++++|+|+|||..+ ...++|+|+|.. .|+. .+ +.+.+.. ......+++++.++||+++|+|.+.
T Consensus 66 ~wAP~-v~~~~g~yy~yys~~----~~i~va~s~~p~gp~~~~~~~p~~~~~~--~~~~~iDp~vf~d~dG~~yl~~~~~ 138 (275)
T cd09004 66 AWAPS-VIERNGKYYFYFSAN----GGIGVAVADSPLGPFKDALGKPLIDKFT--FGAQPIDPDVFIDDDGQAYLYWGGW 138 (275)
T ss_pred cCCCe-EEEECCEEEEEEEcC----CcEEEEEeCCCCCCCCCCCCCccccCCc--CCCCccCCCeEECCCCCEEEEEcCc
Confidence 45684 788999999999953 578999999975 7887 33 3333321 1234567888887789999999753
Q ss_pred cCCCcceEEE-EEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeec-C-CccEEEEEEe
Q 008686 138 DAGNKQVQNL-AVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI-N-DTGLAILYRS 214 (557)
Q Consensus 138 ~~~~~~~q~l-A~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~-~-~~G~i~ly~S 214 (557)
. . ..+ ..+.|. .+|+.. ..++.... ...+.-|.+ ++ .+|+|||++.+.. . ..-++.+++|
T Consensus 139 ~----~-~~i~~l~~d~-----~~~~~~--~~~~~~~~---~~~~EgP~i-~k-~~G~yyl~ys~~~~~~~~Y~~~ya~s 201 (275)
T cd09004 139 G----H-CNVAKLNEDM-----ISFDGE--RDGSEITP---KNYFEGPFM-FK-RNGIYYLMWSEGGWTDPDYHVAYAMA 201 (275)
T ss_pred C----C-EEEEEECCCc-----ccccCc--ceeeeccC---CCceecceE-EE-ECCEEEEEEECCCCCCCCceEEEEEc
Confidence 1 1 222 334442 456532 11221111 124578884 55 5889999987753 2 2226778888
Q ss_pred CCCC-CCEEccc
Q 008686 215 KDFV-NWTKAEQ 225 (557)
Q Consensus 215 ~Dl~-~W~~~~~ 225 (557)
+++. -|+..+.
T Consensus 202 ~~~~GP~~~~~~ 213 (275)
T cd09004 202 DSPLGPFERPGN 213 (275)
T ss_pred CCCCCCcccCCc
Confidence 8764 4876553
No 57
>PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B ....
Probab=98.04 E-value=0.0001 Score=75.03 Aligned_cols=148 Identities=16% Similarity=0.126 Sum_probs=92.9
Q ss_pred CcceEEECCEEEEEEEEe-cCCCeEEEEEEeCCCC-cceecCCCCCCCCCcCCCceEeeeEEEccCCeEEEEEeeecCC-
Q 008686 64 PNGPMIYKGIYHFFYQYK-LWDTVVWGHSTSTDMV-NWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAG- 140 (557)
Q Consensus 64 PnG~~~~~G~YHlfyq~~-~~g~~~Wgha~S~Dlv-hW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~YTg~~~~- 140 (557)
| -+++.+|+|||||... .-.....+.|+|++.. .|+..+..+.+ ...+..+++++++||+.||+|.+....
T Consensus 70 P-~i~~~~g~yy~y~~~~~~~~~~~~~va~a~~~~Gp~~~~~~~~~~-----~~~~iD~~vf~d~dG~~Yl~~~~~~~~~ 143 (286)
T PF04616_consen 70 P-EIHYINGKYYMYYSDSGGDAGSGIGVATADSPDGPWTDPGKIPIP-----GGNSIDPSVFVDDDGKYYLYYGSWDNGD 143 (286)
T ss_dssp E-EEEEETTEEEEEEEEESTSTTEEEEEEEESSTTS-EEEEEEEEEE-----SSSSSSEEEEEETTSEEEEEEEESTTTS
T ss_pred C-eEEEcCCeEEEEEEccCCCCCcceeEEEeCCcccccccccceeec-----cccccCceEEEecCCCcEEeCcccCCCc
Confidence 5 3678899999999943 3345679999999986 99987654333 234677899987679999999986542
Q ss_pred CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeec-CCccEEEEEEeCCCCC
Q 008686 141 NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI-NDTGLAILYRSKDFVN 219 (557)
Q Consensus 141 ~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~-~~~G~i~ly~S~Dl~~ 219 (557)
..+.+.++...+.. .++.......+.............-|++ ++ .+|+|||++.+.. ...=++.+++|+++..
T Consensus 144 ~~~~i~~~~l~~d~----~~~~~~~~~~~~~~~~~~~~~~~Egp~~-~k-~~g~yYl~~s~~~~~~~y~v~~~~s~~~~g 217 (286)
T PF04616_consen 144 PGGGIYIAELDPDG----TSLTGEPVVVIFPGDEGWDGGVVEGPFV-FK-HGGKYYLFYSAGGTGSPYQVGYARSDSPLG 217 (286)
T ss_dssp SEEEEEEEEEETTT----SSEEEEECEEEEEESGSSTTTBEEEEEE-EE-ETTEEEEEEEESGSSTTTEEEEEEESSTTS
T ss_pred cceeEEeecccCcc----ccccCcccccccccccccCCccccceEE-EE-cCCCEEEEEeccCCCCCceEEEeeccCCCC
Confidence 23444555443321 3333321122223221222344567885 45 5899999998654 2224678899999875
Q ss_pred -CEEc
Q 008686 220 -WTKA 223 (557)
Q Consensus 220 -W~~~ 223 (557)
|+..
T Consensus 218 p~~~~ 222 (286)
T PF04616_consen 218 PWEWK 222 (286)
T ss_dssp GGEET
T ss_pred ceeec
Confidence 4443
No 58
>cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs
Probab=98.04 E-value=7.4e-05 Score=76.45 Aligned_cols=78 Identities=22% Similarity=0.418 Sum_probs=56.5
Q ss_pred CCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEEEEEeCCCCCCEEcccccccCCCCCceeecceEEec
Q 008686 166 ENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSLYSTNQSGMWECPDFFPVS 245 (557)
Q Consensus 166 ~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~~~ECPdlf~l~ 245 (557)
.||||. ..+.||.|++. ++.|||+.++.. ..+.+.+|+|+||.+|+..+..+. ...+.+| +|+++..+
T Consensus 7 ~nPv~~-------~~~~DP~i~~~--~~~yY~~~t~~~-~~~gi~i~~S~DL~~W~~~g~~~~-~~~~~~W-AP~i~~~~ 74 (280)
T cd09002 7 RNPILA-------GDYPDPSILRD--GEDYYMTHSSFK-YTPGLVIWHSRDLVNWTPVGPALP-EYEGDVW-APDLCKYD 74 (280)
T ss_pred eCCccC-------CCCCCCEEEEE--CCEEEEEEcchh-cCCCEEEEECCCcCCceEcccccc-CCCCCEE-cCeeEEEC
Confidence 478874 24579997643 689999765422 233589999999999999875332 3345678 89999987
Q ss_pred CCCCCCeeecccCCceeEEEEEeec
Q 008686 246 TKSPKGVDTSVIGPNIKHVLKVSLS 270 (557)
Q Consensus 246 ~~g~~~~~~~~~~~~~~~vl~~s~~ 270 (557)
| |++|.++..
T Consensus 75 --g-------------kyy~yys~~ 84 (280)
T cd09002 75 --G-------------RYYIYFPAI 84 (280)
T ss_pred --C-------------EEEEEEEee
Confidence 6 888888864
No 59
>COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism]
Probab=98.02 E-value=0.00016 Score=78.43 Aligned_cols=166 Identities=19% Similarity=0.296 Sum_probs=98.0
Q ss_pred cCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCCCCCCc-------CCCceEeeeEEEccCCeEEEEE
Q 008686 62 NDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQPF-------DANSCWSGSVTILPGGNPAVLY 134 (557)
Q Consensus 62 nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~-------d~~gv~SGsav~~~dg~~~l~Y 134 (557)
-||- +|..+.-|+|=-....|-+- -.-+.|+||+||+...-.|.+...+ +..|||.+++. ..||+++|+|
T Consensus 31 PDpS-i~rvg~dyYia~stF~~fpG-l~i~hS~DL~nW~~v~tpl~~~~~ld~kgn~~~S~giWAPdl~-y~dGkfwl~y 107 (549)
T COG3507 31 PDPS-IVRVGDDYYIATSTFEWFPG-LAIHHSRDLVNWTLVSTPLIRTSQLDLKGNFPYSGGIWAPDLS-YHDGKFWLYY 107 (549)
T ss_pred CCCc-eEecCCceEEEcceEEEcCc-eeeeccccccCcEEecccccCcchhhhhcccCCCCceecccee-cCCCcEEEEE
Confidence 5884 66666677774442233222 6678899999999987766665422 35689999987 5699999999
Q ss_pred eeecCCC---cceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCC------
Q 008686 135 TGIDAGN---KQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIND------ 205 (557)
Q Consensus 135 Tg~~~~~---~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~------ 205 (557)
|...... ....+..++.+..+ ..|.. |+.-+.. .--||.++ ++++|+-||+.++....
T Consensus 108 tdvk~~~g~~k~~~nyl~t~~s~~---G~WsD----pi~l~~~-----~~iDPslf-~D~dGr~wlv~~~w~~~~~~~~~ 174 (549)
T COG3507 108 TDVKRSGGPYKNAGNYLVTAESID---GPWSD----PIKLNGS-----NAIDPSLF-FDKDGRKWLVNGSWDGGIFMHSF 174 (549)
T ss_pred ecccccCCcccccccEEEEecCCC---CCccc----ceecCCc-----CccCCcee-ecCCCCEEEEecccCCCcccccc
Confidence 8775532 22222333322211 35664 3432211 23599954 55889999999876522
Q ss_pred ccEEEEEEeC---CCCCCEEcccccccCCCCCceeecceEEec
Q 008686 206 TGLAILYRSK---DFVNWTKAEQSLYSTNQSGMWECPDFFPVS 245 (557)
Q Consensus 206 ~G~i~ly~S~---Dl~~W~~~~~~~~~~~~~~~~ECPdlf~l~ 245 (557)
.+.++-..++ .|..+.+ + .++........|-|-+++.+
T Consensus 175 ~~i~l~~~~~~~~~l~g~~~-~-~~~~G~~~~~~EGPhl~k~~ 215 (549)
T COG3507 175 AGIILQEYDKTTQKLVGQGY-K-IIFDGGNGGLTEGPHLYKKT 215 (549)
T ss_pred cceeeeeccccccccCCccc-e-eEeccCCCccccCceeeccC
Confidence 1333222221 2333322 1 23333345578999888877
No 60
>cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase. Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n
Probab=98.00 E-value=0.00013 Score=76.42 Aligned_cols=144 Identities=19% Similarity=0.198 Sum_probs=93.4
Q ss_pred ECCEEEEEEEEe-c---C---CCeEEEEEEeCCCC----cceecCCCCCCCCC-cC-------------CCceEeeeEEE
Q 008686 70 YKGIYHFFYQYK-L---W---DTVVWGHSTSTDMV----NWTPHDAAIYPSQP-FD-------------ANSCWSGSVTI 124 (557)
Q Consensus 70 ~~G~YHlfyq~~-~---~---g~~~Wgha~S~Dlv----hW~~~~~aL~P~~~-~d-------------~~gv~SGsav~ 124 (557)
.+|+|||||..+ . . -....++++++|+. .|+.+.+.+.++.. |+ ....-.+.++.
T Consensus 80 ~dg~~~lfYTg~~~~~~~~~~~~Q~ia~a~~~~~~v~~~~~~~~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~ 159 (349)
T cd08997 80 DDGTVQLFYTAVGRKGEPQPTFTQRLALARGTLSVVNLSGFEDHHELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFE 159 (349)
T ss_pred CCCeEEEEEeccccCCCCCCCceEEEEEEECCCcceEecccCccceeeeCCCceEEeccccccccccCccCcccCCEEEe
Confidence 469999999997 1 1 14679999999984 45444445556543 21 22345677777
Q ss_pred cc-CCeEEEEEeeecCCC---------------------------cceEEEEEEcCCCCCccceeecCCCCceEecCCCC
Q 008686 125 LP-GGNPAVLYTGIDAGN---------------------------KQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQI 176 (557)
Q Consensus 125 ~~-dg~~~l~YTg~~~~~---------------------------~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~ 176 (557)
++ +|++||+++++.... .-.++||++++. .+.+|+-+ .|++.+...
T Consensus 160 d~~~G~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~---dl~~W~~~--~PL~~a~~v- 233 (349)
T cd08997 160 DPETGKTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKND---DLTEWKLL--PPLLEANGV- 233 (349)
T ss_pred cCCCCcEEEEEEeccCCCCCccccccccccccccccccccccccccceEEEEEecCC---CCCCcEEc--CccccCCCc-
Confidence 64 588999999876421 134567776643 25789874 588764321
Q ss_pred CCCCccCCeEEEecCCCeEEEEEeeecC-------CccEEEEEEeCCCC-CCEE
Q 008686 177 DPGSFRDPTTAWIGPDKIWRVIIGSKIN-------DTGLAILYRSKDFV-NWTK 222 (557)
Q Consensus 177 ~~~~fRDP~V~~~~~~g~~~m~~ga~~~-------~~G~i~ly~S~Dl~-~W~~ 222 (557)
..++.+|.+ ++ .+|+|||+..++.. +...+..|.|++|. .|+.
T Consensus 234 -~d~~E~P~v-~~-~~gk~yL~~s~~~~~~~~~~~~~~~~~g~vsdsl~GP~~~ 284 (349)
T cd08997 234 -NDELERPHV-VF-HNGKYYLFTISHRSTFAPGLSGPDGLYGFVSDSLRGPYKP 284 (349)
T ss_pred -CCceEcceE-EE-ECCEEEEEEeCCcCccccccCCCCcEEEEEeCCCCCCCcc
Confidence 346889995 45 58999999875542 12246677888874 4554
No 61
>cd08985 GH43_6 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=97.92 E-value=0.00083 Score=68.17 Aligned_cols=144 Identities=12% Similarity=0.113 Sum_probs=90.2
Q ss_pred ccCCcceEEE--CCEEEEEEEEe--cCCCeEEEEEEeCCCC-cceecCCCCCCCCCcCCCceEeeeEEEccCCeEEEEEe
Q 008686 61 MNDPNGPMIY--KGIYHFFYQYK--LWDTVVWGHSTSTDMV-NWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYT 135 (557)
Q Consensus 61 ~nDPnG~~~~--~G~YHlfyq~~--~~g~~~Wgha~S~Dlv-hW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~YT 135 (557)
+.-|. ++|+ +|+|||||... ..+....++|+|++.. .|+.++..+ |.. .+..++++++++||+.||+|.
T Consensus 65 ~waP~-v~y~~~~g~Y~m~~~~~~~~~~~~~igvA~Sd~p~Gpf~~~~~~~-~~~----~~~~Dp~vf~DdDG~~Yl~~~ 138 (265)
T cd08985 65 IERPK-VIYNAKTGKYVMWMHIDSSDYSDARVGVATSDTPTGPYTYLGSFR-PLG----YQSRDFGLFVDDDGTAYLLYS 138 (265)
T ss_pred EECCe-EEEeCCCCEEEEEEEeCCCCCcceeEEEEEeCCCCCCCEECCccC-CCC----CCccCCceEEcCCCCEEEEEe
Confidence 45563 5664 59999999987 3456789999999876 788765433 221 335678898888899999998
Q ss_pred eecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecC-CccEEEEEEe
Q 008686 136 GIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIN-DTGLAILYRS 214 (557)
Q Consensus 136 g~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~-~~G~i~ly~S 214 (557)
+.. .....++.-++. +..+. ..+.... ......-|. +++ .+|.|||+...... ....+..++|
T Consensus 139 ~~~---~~~i~i~~L~~d----~~~~~---~~~~~~~----~~~~~EaP~-i~K-~~g~YYL~~S~~t~~~~~~~~y~~s 202 (265)
T cd08985 139 DRD---NSDLYIYRLTDD----YLSVT---GEVTTVF----VGAGREAPA-IFK-RNGKYYLLTSGLTGWNPNDARYATA 202 (265)
T ss_pred cCC---CCceEEEEeCCC----ccccc---ceEEEcc----CCCccccce-EEE-ECCEEEEEEccCCCccCCceEEEEe
Confidence 653 123344433221 23332 2233211 123567898 466 58999999876431 1234678888
Q ss_pred CCCC-CCEEcccc
Q 008686 215 KDFV-NWTKAEQS 226 (557)
Q Consensus 215 ~Dl~-~W~~~~~~ 226 (557)
+++. -|+..+.+
T Consensus 203 ~s~~GP~~~~~~~ 215 (265)
T cd08985 203 TSILGPWTDLGNP 215 (265)
T ss_pred cCCCCCccccCcC
Confidence 8764 57776543
No 62
>COG2152 Predicted glycosylase [Carbohydrate transport and metabolism]
Probab=97.91 E-value=0.00012 Score=73.88 Aligned_cols=114 Identities=20% Similarity=0.285 Sum_probs=86.2
Q ss_pred CCCCCC--CcCCC----ceEeeeEEEccCCeEEEEEeee-----cCCCcceEEEEEEcCCCCCccce-eecCCCCceEec
Q 008686 105 AIYPSQ--PFDAN----SCWSGSVTILPGGNPAVLYTGI-----DAGNKQVQNLAVPKNLSDPYLKE-WIKPPENPLMVP 172 (557)
Q Consensus 105 aL~P~~--~~d~~----gv~SGsav~~~dg~~~l~YTg~-----~~~~~~~q~lA~s~d~~d~~l~~-w~k~~~~Pvi~~ 172 (557)
.+.|.. .+++. .+|.++++.. +++++|+|-.. .........+|.|+|+ .+ |++.+ +|++.|
T Consensus 13 Ii~~~~~~~~~~~~~~~~vFNpav~~~-~~~~~~l~Rv~~~yye~~~~~s~l~ia~s~dg-----i~~~~~e~-ep~~~P 85 (314)
T COG2152 13 IITRSDYIPPHARFIVVSVFNPAVVLV-GGELLLLYRVVEGYYEDHSSISHLRIARSDDG-----IGEFEIEP-EPTLWP 85 (314)
T ss_pred ceeeccccCCCCceeEEEEecceeEEE-CCEEEEEEEEeccccccCccceEEEEEecccC-----CCceecCC-cceEec
Confidence 455554 34555 7999999886 89999998872 2235677889999987 34 88864 799976
Q ss_pred -CCCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEEEEEeCCCCCCEEccccc
Q 008686 173 -ADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSL 227 (557)
Q Consensus 173 -p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~~ 227 (557)
...++.....||-|+. .+++|+|.+.+..+...+..++.++|+.+|++.+.++
T Consensus 86 ~~~~~e~~G~EDPRvt~--I~~~y~mtYTa~s~~g~~~~la~t~~f~n~~rig~i~ 139 (314)
T COG2152 86 ANYPYEIYGIEDPRVTK--IGGRYYMTYTAYSDKGPRLALAVTKDFLNWERIGAIF 139 (314)
T ss_pred CCCchhhhcccCceEEE--ECCEEEEEEEecCCCCcccchhhhhhhhhhhhccccc
Confidence 3345677889999654 4799999999986555578899999999999987533
No 63
>cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended
Probab=97.90 E-value=6e-05 Score=76.63 Aligned_cols=78 Identities=21% Similarity=0.267 Sum_probs=55.4
Q ss_pred CceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEEEEEeCCCCCCEEcccccccC---------CCCCcee
Q 008686 167 NPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSLYST---------NQSGMWE 237 (557)
Q Consensus 167 ~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~---------~~~~~~E 237 (557)
||||. ..+.||.|+. .++.|||+.++..... .+.+|+|+||.+|+..+..+... ..+.+|
T Consensus 1 NPvi~-------~~~~DP~ii~--~~~~yY~~~t~~~~~~-g~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~W- 69 (269)
T cd08989 1 NPILK-------GDNPDPSIIR--AGDDYYMASSTFEWFP-GVQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIW- 69 (269)
T ss_pred CCcCC-------CCCCCCcEEE--ECCeEEEEECccccCC-CcEEEECCccCCCEEccccccCccccccccCCCCCcEE-
Confidence 57763 3567999764 3689999976543223 37899999999999987544321 123466
Q ss_pred ecceEEecCCCCCCeeecccCCceeEEEEEeec
Q 008686 238 CPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLS 270 (557)
Q Consensus 238 CPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~ 270 (557)
+|+++.++ | ||+|.++..
T Consensus 70 AP~v~~~~--G-------------~yy~yy~~~ 87 (269)
T cd08989 70 APCLSYYD--G-------------KFWLIYTAV 87 (269)
T ss_pred cceEEEEC--C-------------EEEEEEecc
Confidence 99999987 6 888888764
No 64
>TIGR01322 scrB_fam sucrose-6-phosphate hydrolase.
Probab=97.89 E-value=0.00011 Score=80.21 Aligned_cols=129 Identities=12% Similarity=0.070 Sum_probs=82.1
Q ss_pred CCcceEEECCEEEEEEEEe-c---CC-CeEEEEEEeCCCCcceecC-CCCCCCCCcCCCceEeeeEEEccCCeEEEEEee
Q 008686 63 DPNGPMIYKGIYHFFYQYK-L---WD-TVVWGHSTSTDMVNWTPHD-AAIYPSQPFDANSCWSGSVTILPGGNPAVLYTG 136 (557)
Q Consensus 63 DPnG~~~~~G~YHlfyq~~-~---~g-~~~Wgha~S~DlvhW~~~~-~aL~P~~~~d~~gv~SGsav~~~dg~~~l~YTg 136 (557)
.++ ++..+|++||||..+ . +. ...-++|+|+|+.+|++.+ ++|.+.......+.-++.|+. .+|+++|++.+
T Consensus 88 sGs-av~~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg~~~~k~~~pvi~~~~~~~~~~fRDP~V~~-~~g~~~M~~g~ 165 (445)
T TIGR01322 88 SGS-AVDNNGQLTLMYTGNVRDSDWNRESYQCLATMDDDGHFEKFGIVVIELPPAGYTAHFRDPKVWK-HNGHWYMVIGA 165 (445)
T ss_pred ECe-EEeeCCEEEEEEeccccCCCCCeeEEEEEEEcCCCCeEEECCCceEeCCCCCCcCcCCCCcEEe-ECCEEEEEEEE
Confidence 443 345799999999986 1 22 2334689999999999876 456543221122345677765 48999999987
Q ss_pred ecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCC---CCCCCCccCCeEEEecCCCeEEEEEeee
Q 008686 137 IDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPAD---QIDPGSFRDPTTAWIGPDKIWRVIIGSK 202 (557)
Q Consensus 137 ~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~---~~~~~~fRDP~V~~~~~~g~~~m~~ga~ 202 (557)
..........+..|+| |++|+.. +++..+.. +..-..|.-|-+ +. -+++|+|+++.+
T Consensus 166 ~~~~~~g~i~ly~S~D-----l~~W~~~--g~~~~~~~~~~~~~g~~~ECPdl-f~-l~~k~vL~~s~~ 225 (445)
T TIGR01322 166 QTETEKGSILLYRSKD-----LKNWTFV--GEILGDGQNGLDDRGYMWECPDL-FS-LDGQDVLLFSPQ 225 (445)
T ss_pred ecCCCceEEEEEECCC-----cccCeEe--cccccccccccCCccceEECCeE-EE-ECCcEEEEEecc
Confidence 6543333446666766 5899974 45553321 111235778874 44 478999998754
No 65
>cd08988 GH43_ABN Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla
Probab=97.67 E-value=0.0015 Score=66.83 Aligned_cols=149 Identities=11% Similarity=0.199 Sum_probs=85.8
Q ss_pred CccCCcceEEECCEEEEEEEEecCC--CeEEEEEEeCCCC-c-----ceecCCCCCCCCCcCCCceEeeeEEEccCCeEE
Q 008686 60 WMNDPNGPMIYKGIYHFFYQYKLWD--TVVWGHSTSTDMV-N-----WTPHDAAIYPSQPFDANSCWSGSVTILPGGNPA 131 (557)
Q Consensus 60 w~nDPnG~~~~~G~YHlfyq~~~~g--~~~Wgha~S~Dlv-h-----W~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~ 131 (557)
-+.-|. +.+++|+|||||.....+ ...++.|+|++.. . |+..++.+.+... .......+++++++||++|
T Consensus 56 ~~WAP~-v~~~~G~yylyys~~~~~~~~~~igva~s~~p~Gp~~~~~w~~~~~i~~~~~~-~~~~~iDp~~f~DdDG~~Y 133 (279)
T cd08988 56 HLWAPD-IYQHNGKFYLYYSVSAFGSNTSAIGLAVNKTIDGPSPDYGWEKGGVVISSDAS-DNYNAIDPAIIFDQHGQPW 133 (279)
T ss_pred CEecce-EEEECCEEEEEEEeccCCCCCceEEEEEcCCCCCCCcCcCccccCceEecCCC-CCCCccCCceEEcCCCCEE
Confidence 356674 788999999999877333 4688999999964 3 4433333333322 2234578899988789999
Q ss_pred EEEeeecCCCcceEEEEEEcCCCCCccceeec-CCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeec-----CC
Q 008686 132 VLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIK-PPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI-----ND 205 (557)
Q Consensus 132 l~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k-~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~-----~~ 205 (557)
|+|.... .+ ....-++.|.. .... .....++..+. +.....=|+ +++ .+|.|||++.+.. +.
T Consensus 134 l~~g~~~-~g--i~~~eL~~d~~-----~~~~~~~~~~i~~~~~--~~~~~Egp~-i~k-~~g~YYl~~S~g~~~~~~~~ 201 (279)
T cd08988 134 LSFGSFW-GG--IKLFELDKDTM-----KPAEPGELHSIAGRER--SSAAIEAPF-ILY-RGDYYYLFVSFGLCCRGGDS 201 (279)
T ss_pred EEecccC-CC--EEEEEECcccC-----CccCCCcceEEeccCC--CCCceEeeE-EEE-cCCeEEEEEEcCcccCCCCC
Confidence 9996432 11 11222333321 1100 00112222211 123456788 456 5899999876532 12
Q ss_pred ccEEEEEEeCCCC-CCEE
Q 008686 206 TGLAILYRSKDFV-NWTK 222 (557)
Q Consensus 206 ~G~i~ly~S~Dl~-~W~~ 222 (557)
.-++.+++|+++. -|+.
T Consensus 202 ~y~v~~arS~~~~GPy~~ 219 (279)
T cd08988 202 TYKIAVGRSKNITGPYLD 219 (279)
T ss_pred CeEEEEEEeCCCCCCCCC
Confidence 2368899999874 3443
No 66
>smart00640 Glyco_32 Glycosyl hydrolases family 32.
Probab=97.65 E-value=0.00027 Score=76.94 Aligned_cols=127 Identities=13% Similarity=0.134 Sum_probs=81.5
Q ss_pred eEEECCEEEEEEEEe--c-----CCCe-EEEEEEeCCCCcceec--CCCCCCCCCcCCCceEeeeEEEccCCeEEEEEee
Q 008686 67 PMIYKGIYHFFYQYK--L-----WDTV-VWGHSTSTDMVNWTPH--DAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTG 136 (557)
Q Consensus 67 ~~~~~G~YHlfyq~~--~-----~g~~-~Wgha~S~DlvhW~~~--~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~YTg 136 (557)
++..+|+||+||..+ . .... .-.+|+|+|+++|++. .++|.+...+.....-++.++..++|+++|++.+
T Consensus 74 av~~~~~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d~~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~~~~~~~~m~~g~ 153 (437)
T smart00640 74 AVIDPGNLSLLYTGNVAIDTNVQVQRQAQQLAASDDLGGTWTKYPGNPVLVPPPGIGTEHFRDPKVFWYDGDKWYMVIGA 153 (437)
T ss_pred EEECCCceEEEEcCCcccccccCcccEEEEEEEECCCCCeeEECCCCcEEeCCCCCCCCCcCCCCccEECCCEEEEEEEE
Confidence 445688899999876 1 1112 2367889999999997 3666554333333445677766434689999987
Q ss_pred ecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCC-----eEEEEEeee
Q 008686 137 IDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDK-----IWRVIIGSK 202 (557)
Q Consensus 137 ~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g-----~~~m~~ga~ 202 (557)
...+....+.++.|+| |++|+.. +++..++.+..-..|..|-. +. -++ +|+|+++.+
T Consensus 154 ~~~~~~G~i~ly~S~D-----l~~W~~~--~~~~~~~~~~~g~~wECPdl-f~-l~~~~~~~~~vLi~s~~ 215 (437)
T smart00640 154 SDEDKTGIALLYRSTD-----LKNWTLL--GELLHSGVGDTGGMWECPDL-FP-LPGDGDTSKHVLKVSPQ 215 (437)
T ss_pred EecCCCeEEEEEECCC-----cccCeEC--CcccccCCCCccceEECCcE-EE-eCCCCCceeEEEEECcC
Confidence 6544455577888877 5899874 45554321211246788873 33 344 899998775
No 67
>cd09003 GH43_AXH_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose
Probab=97.64 E-value=0.0033 Score=65.38 Aligned_cols=150 Identities=14% Similarity=0.105 Sum_probs=88.2
Q ss_pred ccCCcceEEEC----CEEEEEEEEecCCCeEEEEEEeCCCC-cceec-CCCC-CCCCC-cC-CCceEeeeEEEccCCeEE
Q 008686 61 MNDPNGPMIYK----GIYHFFYQYKLWDTVVWGHSTSTDMV-NWTPH-DAAI-YPSQP-FD-ANSCWSGSVTILPGGNPA 131 (557)
Q Consensus 61 ~nDPnG~~~~~----G~YHlfyq~~~~g~~~Wgha~S~Dlv-hW~~~-~~aL-~P~~~-~d-~~gv~SGsav~~~dg~~~ 131 (557)
+.-| -+++++ |+|+|||... ....+.|+|++.. .|+++ +..| .+... .+ .....++++++++||+.|
T Consensus 78 ~WAP-~v~~~~~~~~gkyylyy~~~---~~~igva~SdsP~GP~~~~~g~~l~~~~~~~~~~~~~~iDp~~f~DdDG~~Y 153 (311)
T cd09003 78 SWAP-SIAVKKINGKGKFYLYFANG---GGGIGVLTADSPVGPWTDPLGKPLITGSTPGCAGVVWLFDPAVFVDDDGQGY 153 (311)
T ss_pred cCCC-ceEEeccCCCCEEEEEEecC---CCeEEEEEcCCCCCCcccCCCCeeecCCCCCccCCccccCCCeEECCCCCEE
Confidence 3467 467888 9999999742 4568999999965 99975 3223 22111 11 122468898887789999
Q ss_pred EEEeeecC----CCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeec----
Q 008686 132 VLYTGIDA----GNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI---- 203 (557)
Q Consensus 132 l~YTg~~~----~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~---- 203 (557)
|+|.+... ...+.+.+|.-++. +.+.. ..++....+ ..+.=|.+ ++ .+|.|||++++.-
T Consensus 154 l~~g~~~~~~~~~~~~~i~i~~l~~D----~~~~~---g~~~~i~~~----~~~Egp~~-~K-~~G~YYL~ys~~~~~~~ 220 (311)
T cd09003 154 LYFGGGVPGGRWANPNTARVIKLGDD----MISVD---GSAVTIDAP----YFFEASGL-HK-INGTYYYSYCTNFGGRD 220 (311)
T ss_pred EEECCccCCCccccCCCEEEEEeCCC----ceecc---CCceEccCC----CceEeeeE-EE-ECCEEEEEEeCCCCccC
Confidence 99975321 11123444433321 12222 223321111 24577884 55 6899999886541
Q ss_pred ---CCccEEEEEEeCCCC-CCEEccccc
Q 008686 204 ---NDTGLAILYRSKDFV-NWTKAEQSL 227 (557)
Q Consensus 204 ---~~~G~i~ly~S~Dl~-~W~~~~~~~ 227 (557)
....++.+++|++.. -|+..+.++
T Consensus 221 ~~~~~~y~v~y~~s~~~~GP~~~~g~il 248 (311)
T cd09003 221 PGKPPPGRIAYMTSKNPMGPFTYKGIIL 248 (311)
T ss_pred CCCCCceeEEEEEcCCCCCCcccCCEec
Confidence 224467778887754 587755433
No 68
>cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=97.61 E-value=0.0017 Score=66.00 Aligned_cols=134 Identities=12% Similarity=0.062 Sum_probs=82.4
Q ss_pred ccCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCC-cceecCCCCCCCCCcCCCceEeeeEEEccCCeEEEEEeeecC
Q 008686 61 MNDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMV-NWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDA 139 (557)
Q Consensus 61 ~nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~Dlv-hW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~YTg~~~ 139 (557)
+..| -+++.+|+|||||..+. .+.+.|+|++.. .|++.+... ...+++++.++||+.||+|.+.
T Consensus 76 ~WAP-~v~~~~gkyy~yys~~~---~~~~v~~a~~p~Gpw~~~~~~~---------~~iDp~~f~D~dG~~Yl~~~~~-- 140 (269)
T cd09001 76 QWAP-SLRYHNGTFYVFFCTNT---GGTYIYTADDPEGPWTKTALDG---------GYHDPSLLFDDDGTAYLVYGGG-- 140 (269)
T ss_pred EECC-ceEEECCEEEEEEEecC---CCeEEEEcCCCCCCCcCCCcCC---------CcccCceEEcCCCCEEEEeCCC--
Confidence 4567 47889999999998752 235678887754 787665322 2467788887789999998643
Q ss_pred CCcceEEEE-EEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEEEEEeCCCC
Q 008686 140 GNKQVQNLA-VPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFV 218 (557)
Q Consensus 140 ~~~~~q~lA-~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly~S~Dl~ 218 (557)
.+.++ ++.|. ..... +...++..+.. ......-|++ ++ .+|.|||++.+.......+.+++|+++.
T Consensus 141 ----~i~~~~l~~d~-----~~~~~-~~~~~~~~~~~-~~~~~Egp~i-~k-~~G~YYl~~S~~~~~~~~~~~~~s~~~~ 207 (269)
T cd09001 141 ----TIRLVELSPDL-----TGVGG-KDQVIIDAGEE-IGLGAEGSHL-YK-INGYYYIFNIAWGGGGRTQTCLRSKSLT 207 (269)
T ss_pred ----cEEEEEECccc-----CCcCC-CceEEEeCCCc-cccccccCeE-EE-ECCEEEEEEecCCCCCceEEEEEeCCCC
Confidence 23343 33332 22211 12233443321 1235577884 55 5899999987653223356788998864
Q ss_pred C-CEE
Q 008686 219 N-WTK 222 (557)
Q Consensus 219 ~-W~~ 222 (557)
. |+.
T Consensus 208 GP~~~ 212 (269)
T cd09001 208 GPYES 212 (269)
T ss_pred CCcCC
Confidence 3 554
No 69
>cd08980 GH43_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=97.57 E-value=0.0035 Score=64.23 Aligned_cols=153 Identities=12% Similarity=0.117 Sum_probs=84.6
Q ss_pred CccCCcceEEECCEEEEEEEEecC---CCeEEEEEEeCC----CCcceecCCCCCCCCCcCCCceEeeeEEEccCCeEEE
Q 008686 60 WMNDPNGPMIYKGIYHFFYQYKLW---DTVVWGHSTSTD----MVNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAV 132 (557)
Q Consensus 60 w~nDPnG~~~~~G~YHlfyq~~~~---g~~~Wgha~S~D----lvhW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l 132 (557)
-+.-| .+.+.+|+|||||..... .....+.++|++ +-.|++.+..+.+.. .....++++.+ +|++||
T Consensus 54 ~~WAP-~i~~~~g~yylyys~~~~~~~~~~~~~v~~a~~~~~~~Gpw~~~~~~~~~~~----~~~iDp~~~~d-dG~~Yl 127 (288)
T cd08980 54 NLWAP-ELHYIDGKWYIYFAAGDGGGNANHRMYVLENAGADPPTGPWTFKGRLADPTD----RWAIDGTVFEH-NGQLYF 127 (288)
T ss_pred cEECc-eEEEECCEEEEEEEccCCCCCcceeEEEEEeCCCCCCCCCceEeeEeccCCC----CeeeeeEEEEE-CCEEEE
Confidence 34556 367889999999987732 234556677664 568998765442222 23577888875 799999
Q ss_pred EEeeecCC--CcceEEEEEEcCCCCCccceeecCCCCceE-ecC-CCCCC---CCccCCeEEEecCCCeEEEEEeeecC-
Q 008686 133 LYTGIDAG--NKQVQNLAVPKNLSDPYLKEWIKPPENPLM-VPA-DQIDP---GSFRDPTTAWIGPDKIWRVIIGSKIN- 204 (557)
Q Consensus 133 ~YTg~~~~--~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi-~~p-~~~~~---~~fRDP~V~~~~~~g~~~m~~ga~~~- 204 (557)
+|.+.... ......++...+. .++. +.++. ..| ..++. .-..=|+++ + .+|.|||++++..-
T Consensus 128 ~~~~~~~~~~~~~~i~~~~l~~~-----~~~~---g~~~~i~~p~~~we~~~~~~~EgP~~~-k-~~G~yYl~yS~~~~~ 197 (288)
T cd08980 128 VWSGWEGRTNGNQNLYIAKMSNP-----WTLT---GPRVLISRPEYDWERQGPGVNEGPAAL-K-RNGKVFLTYSASGSW 197 (288)
T ss_pred EEEccCCCCCCCccEEEEECCCC-----CccC---CcceEecCCCCCceecCceeeECcEEE-E-ECCEEEEEEECCCCC
Confidence 99865421 1233344433332 2232 12322 222 22221 124567754 4 46999999986542
Q ss_pred Ccc-EEEEEEeC---C-C--CCCEEcccccc
Q 008686 205 DTG-LAILYRSK---D-F--VNWTKAEQSLY 228 (557)
Q Consensus 205 ~~G-~i~ly~S~---D-l--~~W~~~~~~~~ 228 (557)
... ++.+++|+ + + ..|+..+.++.
T Consensus 198 ~~~Y~v~~a~~~~~~~~~~~~~~~~~~~pil 228 (288)
T cd08980 198 TPDYCLGLLTADGGADLLDPASWTKSPTPVF 228 (288)
T ss_pred CCCCEEEEEEEcCCCCCCChhhCcCCCCCce
Confidence 111 45556654 2 2 23765544443
No 70
>PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process
Probab=97.48 E-value=0.013 Score=57.53 Aligned_cols=185 Identities=17% Similarity=0.219 Sum_probs=105.0
Q ss_pred ccCCCCCc--cCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCCCCCCcCCCceEeeeEEE-ccCCeE
Q 008686 54 FQPPSSWM--NDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSVTI-LPGGNP 130 (557)
Q Consensus 54 ~~p~~gw~--nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d~~gv~SGsav~-~~dg~~ 130 (557)
..|+.||. .|| -+++++|+||+|...+.- ...|+...=.-+-+|.+..-| +...-+ .+.-.+.++. .+.+.+
T Consensus 16 ~~Pk~g~~slKD~-T~V~ynGk~~VyAtt~d~-~~~y~sm~f~~Ftdws~~~sA--~q~~m~-~~~vAP~vFYFaPk~~W 90 (271)
T PF03664_consen 16 AQPKSGWVSLKDF-TIVPYNGKHHVYATTADT-GGGYGSMNFGPFTDWSQMASA--SQNYMD-QSAVAPQVFYFAPKNIW 90 (271)
T ss_pred ccCCCCceeccCc-eEEeECCEEEEEEEeccC-CCccceEeeeccCCHHHhhcc--ccccCC-cccccceEEEecCCcEE
Confidence 45778984 699 588999999999997711 124655544556678776543 222111 1223344443 257888
Q ss_pred EEEEeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEE
Q 008686 131 AVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAI 210 (557)
Q Consensus 131 ~l~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ 210 (557)
||.|--.. ..-...++.|.++| ..|.. ..|++...-.-.....-|..|+.+ +..-||+... ..|.
T Consensus 91 ~L~yQwg~----~~fsY~Ts~Dptnp--ngWSa--pq~lf~g~i~~~~~g~iD~~vI~D--~~n~yLFfa~---DnGk-- 155 (271)
T PF03664_consen 91 YLAYQWGP----AAFSYSTSSDPTNP--NGWSA--PQPLFSGSISGSGTGPIDQWVICD--DTNMYLFFAG---DNGK-- 155 (271)
T ss_pred EEEEecCC----CcceeecCCCCCCC--ccCCC--CcccccccccCCCCCceeeEEEec--CCceEEEEcC---CCCc--
Confidence 99886221 11123456777776 56886 356653211111245689987754 3344555443 2354
Q ss_pred EEEeCC-CCCC----EEcccccccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecC
Q 008686 211 LYRSKD-FVNW----TKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSN 271 (557)
Q Consensus 211 ly~S~D-l~~W----~~~~~~~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~ 271 (557)
||||.- +-+. .-....+........+|.++++++. |. .++.|++-..+
T Consensus 156 iYRs~~~i~nFP~~fgs~~~vvmsd~~~nLFEA~~VYkv~--G~-----------~~YLmiVEaiG 208 (271)
T PF03664_consen 156 IYRSSMPIGNFPGGFGSSYTVVMSDTRNNLFEAVQVYKVK--GQ-----------NQYLMIVEAIG 208 (271)
T ss_pred EEEeccchhhCCCCCCCceEEEEecCccceeeeeEEEEEc--CC-----------ceEEEEEEEec
Confidence 788843 2222 1011123333345689999999998 52 27888776544
No 71
>PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A ....
Probab=97.35 E-value=0.012 Score=59.47 Aligned_cols=164 Identities=16% Similarity=0.170 Sum_probs=94.6
Q ss_pred CCCCCCcccccccCCC---CCccCCcceEEECCEEEEEEEEe----cCCCeEEEEEEeCC-CCcceecCCCCCCCCCcCC
Q 008686 43 ITSQPYRTGYHFQPPS---SWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTD-MVNWTPHDAAIYPSQPFDA 114 (557)
Q Consensus 43 ~~~~~~rp~yH~~p~~---gw~nDPnG~~~~~G~YHlfyq~~----~~g~~~Wgha~S~D-lvhW~~~~~aL~P~~~~d~ 114 (557)
+....|-+.-=+.... .=..||.-+.-.+|+.||||... .|......+.+|+| ..+|.... .|.+......
T Consensus 27 D~G~tWs~~~~v~~~~~~~~~~~~p~~~~~~~g~l~l~~~~~~~~~~~~~~~~~~~~S~D~G~TWs~~~-~l~~~~~~~~ 105 (275)
T PF13088_consen 27 DGGKTWSEPRIVADGPKPGRRYGNPSLVVDPDGRLWLFYSAGSSGGGWSGSRIYYSRSTDGGKTWSEPT-DLPPGWFGNF 105 (275)
T ss_dssp CCTTEEEEEEEEETSTBTTCEEEEEEEEEETTSEEEEEEEEEETTESCCTCEEEEEEESSTTSS-EEEE-EEHHHCCCSC
T ss_pred CCCCeeCCCEEEeeccccCCcccCcEEEEeCCCCEEEEEEEccCCCCCCceeEEEEEECCCCCCCCCcc-ccccccccce
Confidence 3445565443333322 33568853333499999999665 34455555599999 89999764 2333322223
Q ss_pred CceEeeeEEEccCCeEEEEEeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCe
Q 008686 115 NSCWSGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKI 194 (557)
Q Consensus 115 ~gv~SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~ 194 (557)
.+...+.++...+|++++-+.... .......+.+|.|++ ++|+... ++.. ....--|.++.. .+|+
T Consensus 106 ~~~~~~~~i~~~~G~l~~~~~~~~-~~~~~~~~~~S~D~G----~tW~~~~--~~~~------~~~~~e~~~~~~-~dG~ 171 (275)
T PF13088_consen 106 SGPGRGPPIQLPDGRLIAPYYHES-GGSFSAFVYYSDDGG----KTWSSGS--PIPD------GQGECEPSIVEL-PDGR 171 (275)
T ss_dssp EECSEEEEEEECTTEEEEEEEEES-SCEEEEEEEEESSTT----SSEEEEE--ECEC------SEEEEEEEEEEE-TTSE
T ss_pred eccceeeeeEecCCCEEEEEeecc-ccCcceEEEEeCCCC----ceeeccc--cccc------cCCcceeEEEEC-CCCc
Confidence 344555555556888777533222 234666778899875 8998742 2210 112234554333 6788
Q ss_pred EEEEEeeecCCccEEEEEEeCC-CCCCEEc
Q 008686 195 WRVIIGSKINDTGLAILYRSKD-FVNWTKA 223 (557)
Q Consensus 195 ~~m~~ga~~~~~G~i~ly~S~D-l~~W~~~ 223 (557)
.+|++... ..+.+.+++|.| +.+|+..
T Consensus 172 l~~~~R~~--~~~~~~~~~S~D~G~TWs~~ 199 (275)
T PF13088_consen 172 LLAVFRTE--GNDDIYISRSTDGGRTWSPP 199 (275)
T ss_dssp EEEEEEEC--SSTEEEEEEESSTTSS-EEE
T ss_pred EEEEEEcc--CCCcEEEEEECCCCCcCCCc
Confidence 88877653 223778888877 6899863
No 72
>cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=97.31 E-value=0.0089 Score=61.22 Aligned_cols=145 Identities=12% Similarity=-0.018 Sum_probs=86.2
Q ss_pred CCccCCcceEEECCEEEEEEEEec-CCCeEEEEEEeCCCC-cceecCCCCCCCCCcCCCceEeeeEEEccCCeEEEEEee
Q 008686 59 SWMNDPNGPMIYKGIYHFFYQYKL-WDTVVWGHSTSTDMV-NWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTG 136 (557)
Q Consensus 59 gw~nDPnG~~~~~G~YHlfyq~~~-~g~~~Wgha~S~Dlv-hW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~YTg 136 (557)
+-+.-| -+++.+|+|||||.... .+....+.++|+|.- .|++. . +.+. .+..++++.++||+.||+|..
T Consensus 66 ~~~WAP-~v~~~~g~yy~yy~~~~~~~~~~~~v~~s~~p~gpw~~~-~-~~~~------~~iDp~vf~d~dG~~Y~~~~~ 136 (288)
T cd09000 66 GGIWAP-TIRYHDGTFYLITTNVDGMKDGGNFIVTADDPAGPWSDP-V-WLDS------GGIDPSLFFDDDGKVYLVGNG 136 (288)
T ss_pred CceEcc-eEEEECCEEEEEEEecCCCCCCceEEEEeCCCCCCCcCC-E-ecCC------CccCCceeEcCCCCEEEEecc
Confidence 335568 47889999999999872 124456788999883 78742 1 2222 456788888778999998865
Q ss_pred ecCC----CcceEEEEEEcCCCCCccceeecCC-CCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeec-CCccEEE
Q 008686 137 IDAG----NKQVQNLAVPKNLSDPYLKEWIKPP-ENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI-NDTGLAI 210 (557)
Q Consensus 137 ~~~~----~~~~q~lA~s~d~~d~~l~~w~k~~-~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~-~~~G~i~ 210 (557)
.... +...+.++..+. ..++-.. ..++..... .....-|.+ ++ .+|+|||++.... ...-.+.
T Consensus 137 ~~~~~~~~~~~~i~~~~l~~------~~~~~~~~~~~~~~~~~---~~~~Egp~v-~k-~~g~YYl~ys~~~~~~~~~v~ 205 (288)
T cd09000 137 WDERRGYNGHGGIWLQEIDL------ETGKLLGEPKVIWNGTG---GRWPEGPHL-YK-RDGWYYLLIAEGGTGYGHSVT 205 (288)
T ss_pred cCCccccCCCCcEEEEEEcc------ccCCCCCCcEEEEeCCC---CCCcccCeE-EE-ECCEEEEEEecCCCCCCeEEE
Confidence 4221 123344553322 1222111 112222111 124467884 55 5899999986543 2234688
Q ss_pred EEEeCCCC-CCEEc
Q 008686 211 LYRSKDFV-NWTKA 223 (557)
Q Consensus 211 ly~S~Dl~-~W~~~ 223 (557)
+++|+++. -|+..
T Consensus 206 ~~~s~~~~Gp~~~~ 219 (288)
T cd09000 206 VARSRSITGPYEPA 219 (288)
T ss_pred EEEeCCCCCCCccC
Confidence 99999876 67664
No 73
>cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases.
Probab=96.85 E-value=0.039 Score=57.92 Aligned_cols=164 Identities=16% Similarity=0.199 Sum_probs=98.1
Q ss_pred CCCCCCcccccccCCC---CCccCCcceEEEC-CEEEEEEEEec-----------CCCeEEEEEEeCCC-CcceecCCCC
Q 008686 43 ITSQPYRTGYHFQPPS---SWMNDPNGPMIYK-GIYHFFYQYKL-----------WDTVVWGHSTSTDM-VNWTPHDAAI 106 (557)
Q Consensus 43 ~~~~~~rp~yH~~p~~---gw~nDPnG~~~~~-G~YHlfyq~~~-----------~g~~~Wgha~S~Dl-vhW~~~~~aL 106 (557)
+....|.+.--+.... ..+.||. ++... |+.+|||.... +...+..+.+|+|. ..|... ..|
T Consensus 55 D~G~tW~~~~~i~~~~~~~~~~~~p~-~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G~tW~~p-~~l 132 (351)
T cd00260 55 DGGKTWSPSTVISDGDGKSSRVKDPT-VVVDGLGRVFLLVGSFPNGEGEDNDYAGPSNAYLVLVYSDDDGITWSSP-RDL 132 (351)
T ss_pred cCCCcccccEEehhcCCCCCcEEcce-EEEcCCCCEEEEEEECCCcccccccccCCCceEEEEEEEEcCCceecCC-ccC
Confidence 3446777654344332 3567895 56666 99999997761 12456778888887 899853 334
Q ss_pred CCCC---CcCCCceEeeeEEEccCCeEEEEEeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccC
Q 008686 107 YPSQ---PFDANSCWSGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRD 183 (557)
Q Consensus 107 ~P~~---~~d~~gv~SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRD 183 (557)
.+.. .+.....-.|+.+...+|++++.+.+....+.....+.+|+|.| ++|+... +. . + ......
T Consensus 133 ~~~~~~~~~~~~~~~~g~gi~l~~Grlv~p~~~~~~~~~~~~~~~~S~D~G----~tW~~~~--~~-~-~----~~~~~e 200 (351)
T cd00260 133 TPSVKGDNWAALFTGPGSGIQMKDGRLVFPVYGGNAGGRVSSAIIYSDDSG----KTWKLGE--GV-N-D----AGGCSE 200 (351)
T ss_pred CccccCcceeEEEecCcCeEEecCCcEEEEEEEEcCCCCEEEEEEEECCCC----CCcEECC--CC-C-C----CCCCcC
Confidence 3332 22211111233455557888776555443344556777888875 7997632 11 1 1 123456
Q ss_pred CeEEEecCCCeEEEEEeeecCCccEEEEEEeCCC-CCCEEc
Q 008686 184 PTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDF-VNWTKA 223 (557)
Q Consensus 184 P~V~~~~~~g~~~m~~ga~~~~~G~i~ly~S~Dl-~~W~~~ 223 (557)
|.++-. .+|+.+|+..... .+.+.++.|.|. ..|+..
T Consensus 201 ~~i~el-~dG~l~~~~R~~~--~~~~~~~~S~D~G~tWs~~ 238 (351)
T cd00260 201 CSVVEL-SDGKLYMYTRDNS--GGRRPVYESRDMGTTWTEA 238 (351)
T ss_pred CEEEEe-cCCEEEEEEeeCC--CCcEEEEEEcCCCcCcccC
Confidence 776543 5788888765542 466778888774 899864
No 74
>PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A ....
Probab=96.74 E-value=0.23 Score=50.01 Aligned_cols=160 Identities=16% Similarity=0.104 Sum_probs=87.8
Q ss_pred CEEEEEEEEe-cCCCeEEEEEEe--CCC-CcceecCCCCCCCCCcCCCceEeeeEEEccCCeEEEEEeeecCCC---cce
Q 008686 72 GIYHFFYQYK-LWDTVVWGHSTS--TDM-VNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAGN---KQV 144 (557)
Q Consensus 72 G~YHlfyq~~-~~g~~~Wgha~S--~Dl-vhW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~YTg~~~~~---~~~ 144 (557)
|+...++... ..+.......+| +|. .+|.....+..+. -....+..++++...+|+++|||+...... ...
T Consensus 1 G~l~a~~~~~~~~~~~d~~i~~S~s~D~G~tWs~~~~v~~~~--~~~~~~~~p~~~~~~~g~l~l~~~~~~~~~~~~~~~ 78 (275)
T PF13088_consen 1 GRLLAVWEGGSDEGAIDIVIRRSRSTDGGKTWSEPRIVADGP--KPGRRYGNPSLVVDPDGRLWLFYSAGSSGGGWSGSR 78 (275)
T ss_dssp SEEEEEEEESSCSCCEEEEEEEECCCCCTTEEEEEEEEETST--BTTCEEEEEEEEEETTSEEEEEEEEEETTESCCTCE
T ss_pred CeEEEEEECCcccCCCCEEEEEEEeeCCCCeeCCCEEEeecc--ccCCcccCcEEEEeCCCCEEEEEEEccCCCCCCcee
Confidence 4455555555 455666666666 987 7899865444333 122456777777667999999995544321 122
Q ss_pred EEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEEEEEeCC-CCCCEEc
Q 008686 145 QNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKD-FVNWTKA 223 (557)
Q Consensus 145 q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly~S~D-l~~W~~~ 223 (557)
....+|.|+| ++|++.. .|...+........+.+- +-. .+|++++..-........+.++.|+| .+.|+..
T Consensus 79 ~~~~~S~D~G----~TWs~~~--~l~~~~~~~~~~~~~~~~-i~~-~~G~l~~~~~~~~~~~~~~~~~~S~D~G~tW~~~ 150 (275)
T PF13088_consen 79 IYYSRSTDGG----KTWSEPT--DLPPGWFGNFSGPGRGPP-IQL-PDGRLIAPYYHESGGSFSAFVYYSDDGGKTWSSG 150 (275)
T ss_dssp EEEEEESSTT----SS-EEEE--EEHHHCCCSCEECSEEEE-EEE-CTTEEEEEEEEESSCEEEEEEEEESSTTSSEEEE
T ss_pred EEEEEECCCC----CCCCCcc--ccccccccceeccceeee-eEe-cCCCEEEEEeeccccCcceEEEEeCCCCceeecc
Confidence 2238899975 8999742 333221111122234433 223 47877766322222334556666655 6899876
Q ss_pred ccccccCCCCCceeecceEEec
Q 008686 224 EQSLYSTNQSGMWECPDFFPVS 245 (557)
Q Consensus 224 ~~~~~~~~~~~~~ECPdlf~l~ 245 (557)
.. .. .....-.|.++++.
T Consensus 151 ~~-~~---~~~~~~e~~~~~~~ 168 (275)
T PF13088_consen 151 SP-IP---DGQGECEPSIVELP 168 (275)
T ss_dssp EE-CE---CSEEEEEEEEEEET
T ss_pred cc-cc---ccCCcceeEEEECC
Confidence 43 22 11123346666666
No 75
>cd08982 GH43_3 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=96.63 E-value=0.024 Score=58.52 Aligned_cols=139 Identities=12% Similarity=0.108 Sum_probs=73.3
Q ss_pred CCCCCccCCcceEEE-CCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCC----CCCCCcCC----------CceEee
Q 008686 56 PPSSWMNDPNGPMIY-KGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAI----YPSQPFDA----------NSCWSG 120 (557)
Q Consensus 56 p~~gw~nDPnG~~~~-~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL----~P~~~~d~----------~gv~SG 120 (557)
....+.-||+ ++.+ ||+.+|+|-...++ .-+.---+.|+..=.-.+..| .|+..|+. .++.-|
T Consensus 86 ~~~~~~IDp~-vf~DdDGk~Yl~~g~~~~~-~i~~~eL~~d~~~~~g~~~~l~~~~~~~~~We~~g~~~~~~~~~~~~EG 163 (295)
T cd08982 86 SFPPGLADPA-LFIDDDGRLYLYYGCSNNY-PLRGVEVDPDTFRPIGEPVELIPGNPDKHGWERFGENNDNPDKTPWMEG 163 (295)
T ss_pred ccCCCccCCc-eEECCCCCEEEEEecCCCC-CeEEEEECcccCCccCcceEEEeCCCCCcCeEecCcccccccCCccccc
Confidence 3345667995 5555 59999998532111 123333344443211111111 12223322 234556
Q ss_pred eEEEccCCeEEEEEeeecCC-CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEE
Q 008686 121 SVTILPGGNPAVLYTGIDAG-NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVII 199 (557)
Q Consensus 121 sav~~~dg~~~l~YTg~~~~-~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ 199 (557)
..+...+|++||+|++.... ..-.+.+|+|++. +..|++...+||+..+.+. ...--...+ +..++|+||+++
T Consensus 164 P~i~k~~G~YYL~yS~~~~~~~~Y~v~~a~s~~p----~GP~~~~~~~pil~~~~~~-~~g~GH~s~-v~~~~G~~~~~y 237 (295)
T cd08982 164 AWMTKHNGKYYLQYAAPGTEFNTYADGVYVSDSP----LGPFTYQPHNPFSYKPGGF-ITGAGHGST-FQDKYGNYWHVG 237 (295)
T ss_pred cEEEEECCEEEEEEeCCCcccCcEeEEEEEeCCC----CCCCCcCCCCccccCCCCe-EecCCcccE-EECCCCCEEEEE
Confidence 66666799999999865322 2234678888765 3457766567888543221 011112233 355678898876
Q ss_pred eee
Q 008686 200 GSK 202 (557)
Q Consensus 200 ga~ 202 (557)
=+.
T Consensus 238 h~~ 240 (295)
T cd08982 238 TMT 240 (295)
T ss_pred EEE
Confidence 433
No 76
>PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure []. ; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A ....
Probab=96.44 E-value=0.054 Score=56.19 Aligned_cols=118 Identities=20% Similarity=0.217 Sum_probs=77.3
Q ss_pred cCCcceE-----EECCEEEEEEEEe-cCCCeEEEEEEe-CCCCcceecC---CCCCCCCCcCCCceEeeeEEEccCCeEE
Q 008686 62 NDPNGPM-----IYKGIYHFFYQYK-LWDTVVWGHSTS-TDMVNWTPHD---AAIYPSQPFDANSCWSGSVTILPGGNPA 131 (557)
Q Consensus 62 nDPnG~~-----~~~G~YHlfyq~~-~~g~~~Wgha~S-~DlvhW~~~~---~aL~P~~~~d~~gv~SGsav~~~dg~~~ 131 (557)
.|.+|+. .+++++++||..+ ..+...-.+|+| +|.+||+..+ ++|......+..+.-++.++...+++++
T Consensus 64 ~d~~g~~SGs~~~~~~~~~~~YTg~~~~~~~~q~~A~s~d~~~~w~k~~~~~pvi~~~p~~~~~~~RDP~v~~~~~~~~~ 143 (308)
T PF00251_consen 64 YDADGCFSGSAVVDDDNLVLFYTGNNRDGKQVQCLAYSTDDGITWTKYPQGNPVIPEPPPGDTTDFRDPKVFWREDGRWY 143 (308)
T ss_dssp GGTTEEEEEEEEEETTCEEEEEEEEETTTEEEEEEEEESSTTSSEEE-TTTCESBESSSTTSCTSEEEEEEEEECTTEEE
T ss_pred CCcCccCcceEEEECCEEEEEEeccCCCCCeEEEEEEECCCCCceEEcCCCCcEEEecccCCCCccccCeEEEecCCEEE
Confidence 3666632 2578999999998 323567788999 8899999953 4454222225567788998555679999
Q ss_pred EEEeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEE
Q 008686 132 VLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAW 188 (557)
Q Consensus 132 l~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~ 188 (557)
|+..+... ......+..|+| |++|+.. +++...... ....+.-|-++.
T Consensus 144 m~~g~~~~-~~g~i~~y~S~D-----l~~W~~~--~~l~~~~~~-~g~~~ECPdlf~ 191 (308)
T PF00251_consen 144 MLLGAGRD-GRGCILLYTSDD-----LIHWEYL--GPLFIPGDN-GGGMWECPDLFP 191 (308)
T ss_dssp EEEEEEET-TEEEEEEEEESS-----SSSEEEE--EEESEEETT-TSSEEEEEEEEE
T ss_pred EEEecccc-CcceEEEEEcCC-----cccCcee--Ccccccccc-cccccccceEEE
Confidence 98877654 445566777877 5899984 355433221 124677887443
No 77
>cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases. The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr
Probab=96.11 E-value=0.21 Score=50.97 Aligned_cols=144 Identities=12% Similarity=0.155 Sum_probs=81.9
Q ss_pred ccCCcceEEE--CCEEEEEEEEecCCCeEEEEEEeCCCC---cceecCCCCCCCCCcCCCceEeeeEEEccCCeEEEEEe
Q 008686 61 MNDPNGPMIY--KGIYHFFYQYKLWDTVVWGHSTSTDMV---NWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYT 135 (557)
Q Consensus 61 ~nDPnG~~~~--~G~YHlfyq~~~~g~~~Wgha~S~Dlv---hW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~YT 135 (557)
.--|. ++|+ +++|+|+||+ + +.+.+||+|.. .|....+.+.........+..+-.+ +.+|++.|||+.
T Consensus 78 fwAPq-Vfyf~pk~kwYL~Yq~---~--~~~yaTs~dp~~P~~ws~~qpl~~~~~~~~~~~~ID~~v-I~Dd~~~YLff~ 150 (303)
T cd08987 78 RVAPQ-VFYFAPQNKWYLIYQW---W--PAAYSTNSDISNPNGWSAPQPLFSGTPNGSPGGWIDFWV-ICDDTNCYLFFS 150 (303)
T ss_pred cccCE-EeeeccCCEEEEEEec---C--ceEEEeCCCCCCCCccCCCcccccCcccCCCCCccceeE-EeCCCCEEEEEe
Confidence 45784 6655 6999999996 3 46799999975 6776555443322222335556666 456899999998
Q ss_pred eecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCC--eEEEEEeeecCCccE-EEEE
Q 008686 136 GIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDK--IWRVIIGSKINDTGL-AILY 212 (557)
Q Consensus 136 g~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g--~~~m~~ga~~~~~G~-i~ly 212 (557)
+-+ + .+..|-... .+|-.....++......-...-|.-|.| ++ .+| +|+|++-+.....++ -.-+
T Consensus 151 ~dn--G--~iyra~~~~------~nFp~~~~~~~~~~~~~~~~~lfEa~~V-yk-v~G~~~YlmiveA~g~~~~rYfrs~ 218 (303)
T cd08987 151 DDN--G--KLYRSSTTL------GNFPNGGTETVIIMSDSNKNNLFEASNV-YK-VKGQNQYLLIVEAIGSDGGRYFRSW 218 (303)
T ss_pred cCC--C--eEEEEecch------hhCCCCCCccEEEecCCCccccceeeEE-EE-ECCCeEEEEEEEecCCCCCCeEEEE
Confidence 643 2 344443322 1222211223332111111245677884 55 445 999999776432222 1226
Q ss_pred EeCCCC-CCEEc
Q 008686 213 RSKDFV-NWTKA 223 (557)
Q Consensus 213 ~S~Dl~-~W~~~ 223 (557)
+|+.|. .|+..
T Consensus 219 Ts~Sl~GpWt~~ 230 (303)
T cd08987 219 TATSLDGPWTPL 230 (303)
T ss_pred EcCCCCCCceec
Confidence 667763 68765
No 78
>cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases.
Probab=94.50 E-value=6.7 Score=41.01 Aligned_cols=150 Identities=17% Similarity=0.192 Sum_probs=84.4
Q ss_pred cCC-CeEEEEEEeCCC-CcceecCCCCCCCCCcCCCceEeeeEEEccCCeEEEEEeeecCC----------CcceEEEEE
Q 008686 82 LWD-TVVWGHSTSTDM-VNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAG----------NKQVQNLAV 149 (557)
Q Consensus 82 ~~g-~~~Wgha~S~Dl-vhW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~YTg~~~~----------~~~~q~lA~ 149 (557)
..+ .+....++|+|. .+|.... ++..... ....+++++++.+.+|+++|||...... ......+..
T Consensus 41 D~~~~~~iv~~~S~D~G~tW~~~~-~i~~~~~-~~~~~~~p~~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (351)
T cd00260 41 DRSNAIDIVARRSTDGGKTWSPST-VISDGDG-KSSRVKDPTVVVDGLGRVFLLVGSFPNGEGEDNDYAGPSNAYLVLVY 118 (351)
T ss_pred CCCcccceeEEEeccCCCcccccE-EehhcCC-CCCcEEcceEEEcCCCCEEEEEEECCCcccccccccCCCceEEEEEE
Confidence 444 667888889884 8999853 3444332 2345788888876339999999876431 234577888
Q ss_pred EcCCCCCccceeecCCCCceEecC--CCCCCCCccCCe-EEEecCCCeEEEEEeeecCC--ccEEEEEEeCCCCCCEEcc
Q 008686 150 PKNLSDPYLKEWIKPPENPLMVPA--DQIDPGSFRDPT-TAWIGPDKIWRVIIGSKIND--TGLAILYRSKDFVNWTKAE 224 (557)
Q Consensus 150 s~d~~d~~l~~w~k~~~~Pvi~~p--~~~~~~~fRDP~-V~~~~~~g~~~m~~ga~~~~--~G~i~ly~S~Dl~~W~~~~ 224 (557)
|.|.+ ++|.+. ..+.... ..+ ..-++-|- .+-. ++|++++-+-..... .-...+|..++...|+..
T Consensus 119 S~D~G----~tW~~p--~~l~~~~~~~~~-~~~~~~~g~gi~l-~~Grlv~p~~~~~~~~~~~~~~~~S~D~G~tW~~~- 189 (351)
T cd00260 119 SDDDG----ITWSSP--RDLTPSVKGDNW-AALFTGPGSGIQM-KDGRLVFPVYGGNAGGRVSSAIIYSDDSGKTWKLG- 189 (351)
T ss_pred EEcCC----ceecCC--ccCCccccCcce-eEEEecCcCeEEe-cCCcEEEEEEEEcCCCCEEEEEEEECCCCCCcEEC-
Confidence 98875 799863 2333211 111 11223331 1223 468877665443321 223344544557999863
Q ss_pred cccccCCCCCceeecceEEec
Q 008686 225 QSLYSTNQSGMWECPDFFPVS 245 (557)
Q Consensus 225 ~~~~~~~~~~~~ECPdlf~l~ 245 (557)
.... ......| |.++++.
T Consensus 190 ~~~~--~~~~~~e-~~i~el~ 207 (351)
T cd00260 190 EGVN--DAGGCSE-CSVVELS 207 (351)
T ss_pred CCCC--CCCCCcC-CEEEEec
Confidence 3221 1123344 7788885
No 79
>COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism]
Probab=93.50 E-value=1.1 Score=49.43 Aligned_cols=146 Identities=12% Similarity=0.114 Sum_probs=78.1
Q ss_pred CCCCCccCCcceEEECCEEEEEEEEe-----cCCCeEEEEEEeCC-CCcceecCCCCCCCCCcCCCceEeeeEEEccCCe
Q 008686 56 PPSSWMNDPNGPMIYKGIYHFFYQYK-----LWDTVVWGHSTSTD-MVNWTPHDAAIYPSQPFDANSCWSGSVTILPGGN 129 (557)
Q Consensus 56 p~~gw~nDPnG~~~~~G~YHlfyq~~-----~~g~~~Wgha~S~D-lvhW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~ 129 (557)
|-.|=+.-|+ |+|+||+|+|+|.-. .|.+++--..+.++ .=.|.+ |+.| |.. ..+++|.+.++||+
T Consensus 86 ~~S~giWAPd-l~y~dGkfwl~ytdvk~~~g~~k~~~nyl~t~~s~~G~WsD-pi~l-~~~-----~~iDPslf~D~dGr 157 (549)
T COG3507 86 PYSGGIWAPD-LSYHDGKFWLYYTDVKRSGGPYKNAGNYLVTAESIDGPWSD-PIKL-NGS-----NAIDPSLFFDKDGR 157 (549)
T ss_pred CCCCceeccc-eecCCCcEEEEEecccccCCcccccccEEEEecCCCCCccc-ceec-CCc-----CccCCceeecCCCC
Confidence 5566677885 889999999999544 22233333333333 225664 2222 222 25778888888999
Q ss_pred EEEEEeeecCC--CcceEEEEEEcCCCCCccceeecCCC--CceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeec-C
Q 008686 130 PAVLYTGIDAG--NKQVQNLAVPKNLSDPYLKEWIKPPE--NPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI-N 204 (557)
Q Consensus 130 ~~l~YTg~~~~--~~~~q~lA~s~d~~d~~l~~w~k~~~--~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~-~ 204 (557)
.+|+|-+.+.. ....-.+-.+.... .+ .|..+ -.++-. +.+...-.-|. +++ ++|-|||+.+-+. .
T Consensus 158 ~wlv~~~w~~~~~~~~~~~i~l~~~~~----~~-~~l~g~~~~~~~~--G~~~~~~EGPh-l~k-~~gYYYL~~a~gG~t 228 (549)
T COG3507 158 KWLVNGSWDGGIFMHSFAGIILQEYDK----TT-QKLVGQGYKIIFD--GGNGGLTEGPH-LYK-KTGYYYLYVAEGGLT 228 (549)
T ss_pred EEEEecccCCCcccccccceeeeeccc----cc-cccCCccceeEec--cCCCccccCce-eec-cCCEEEEEEEcCCCC
Confidence 99999988642 11111112221110 11 12111 111211 11112334565 566 6888888875443 3
Q ss_pred Ccc-EEEEEEeCCCC
Q 008686 205 DTG-LAILYRSKDFV 218 (557)
Q Consensus 205 ~~G-~i~ly~S~Dl~ 218 (557)
..| .+.++||+.+.
T Consensus 229 ~~gh~~~vaRSKsid 243 (549)
T COG3507 229 TYGHAIRVARSKSID 243 (549)
T ss_pred ccceeEEEEeccCCC
Confidence 333 57899998764
No 80
>PF13810 DUF4185: Domain of unknown function (DUF4185)
Probab=92.00 E-value=4.2 Score=42.44 Aligned_cols=150 Identities=18% Similarity=0.173 Sum_probs=89.1
Q ss_pred CCcceEEECCEEEEEEEEe-cCCCe-------EEEEEEeCC-CCcceecCCCCCCCCCc-CCCc----eEeeeEEEccCC
Q 008686 63 DPNGPMIYKGIYHFFYQYK-LWDTV-------VWGHSTSTD-MVNWTPHDAAIYPSQPF-DANS----CWSGSVTILPGG 128 (557)
Q Consensus 63 DPnG~~~~~G~YHlfyq~~-~~g~~-------~Wgha~S~D-lvhW~~~~~aL~P~~~~-d~~g----v~SGsav~~~dg 128 (557)
=|.+.|-.+|+-+|.|+.. .|++. .=+.+.|+| .-+|+..+..+.+..+. .... -|.-.+....||
T Consensus 96 iPt~~I~v~~~~Yl~~msv~~wg~~~G~W~tn~S~i~~S~D~G~tW~~~~~~~~~~~~~~~g~~~~~~~fq~~a~~~~dg 175 (316)
T PF13810_consen 96 IPTDGISVGGRQYLHYMSVRNWGNVPGSWTTNYSGIAYSDDNGETWTVVPGTIRPNSPFHPGFNQGNWNFQMAAFVKDDG 175 (316)
T ss_pred cccceEEECCcEEEEEEEEccCCCCCCccccCceEEEEeCCCCCCceeCCCcccccccccCCccccccccccccccCCCC
Confidence 4888899999999999998 66652 457899999 68999998666555411 1001 122234443567
Q ss_pred eEEEEEeeecCCCcceEEEEEEcCC--CCCc------cce--eecCCC--CceEecCCCCCCCCccCCeEEEecCCCeEE
Q 008686 129 NPAVLYTGIDAGNKQVQNLAVPKNL--SDPY------LKE--WIKPPE--NPLMVPADQIDPGSFRDPTTAWIGPDKIWR 196 (557)
Q Consensus 129 ~~~l~YTg~~~~~~~~q~lA~s~d~--~d~~------l~~--w~k~~~--~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~ 196 (557)
-.|+|=|...+ .....||...-. .|+. ... |.+... .||+..+. ---+|.|.+..|+|+
T Consensus 176 yVYv~gt~~~R--~g~~~LaRV~~~~i~d~~ayeyw~g~~~~W~~~~~~atpv~~~~v-------gElSv~~~~~~gk~V 246 (316)
T PF13810_consen 176 YVYVYGTPFGR--NGGVYLARVPPDDILDRSAYEYWDGSGGGWSWGNPPATPVLPGPV-------GELSVRYNEYLGKWV 246 (316)
T ss_pred EEEEEeCCCCC--CCcEEEEEeCHHHCCChhhccccCCCCcccccCCCCccccccCCc-------cceEEEEeCCCCEEE
Confidence 67777665443 233445543211 1100 012 654221 35654332 233466776789999
Q ss_pred EEEeeecCCccEEEEEEeCCCC-CCEEc
Q 008686 197 VIIGSKINDTGLAILYRSKDFV-NWTKA 223 (557)
Q Consensus 197 m~~ga~~~~~G~i~ly~S~Dl~-~W~~~ 223 (557)
|+.... ..+.|.+.++++.. .|...
T Consensus 247 l~~~~~--~~~~I~~RtA~~P~GpWs~~ 272 (316)
T PF13810_consen 247 LSYFDA--GTGGIVLRTAPSPTGPWSEP 272 (316)
T ss_pred EEEecc--cCCcEEEEecCCCCCCCCCC
Confidence 998643 33578888888876 58743
No 81
>PF13859 BNR_3: BNR repeat-like domain; PDB: 3B69_A.
Probab=90.83 E-value=1.7 Score=45.15 Aligned_cols=142 Identities=16% Similarity=0.218 Sum_probs=71.1
Q ss_pred CCcceEEECCEEEEEEEEe--cCCC--eEEEEEEeCCC-CcceecCCCCCCC--CCcCCCceE--eeeEEEccCCeEEEE
Q 008686 63 DPNGPMIYKGIYHFFYQYK--LWDT--VVWGHSTSTDM-VNWTPHDAAIYPS--QPFDANSCW--SGSVTILPGGNPAVL 133 (557)
Q Consensus 63 DPnG~~~~~G~YHlfyq~~--~~g~--~~Wgha~S~Dl-vhW~~~~~aL~P~--~~~d~~gv~--SGsav~~~dg~~~l~ 133 (557)
.|- .+..+++.+|+.-.+ ..+. -..-++.|+|- +.|.+... |... ..+. ... -||-|+.+||++++=
T Consensus 62 rPT-tvvkgn~IymLvG~y~~~~~~~~~~llLvks~~~g~~W~~~~~-l~~~~~~~~~--~figgGGSGV~m~dGTLVFP 137 (310)
T PF13859_consen 62 RPT-TVVKGNKIYMLVGSYSRSAGADDWGLLLVKSTDGGIKWGDTKS-LPSTSFQSWK--QFIGGGGSGVVMEDGTLVFP 137 (310)
T ss_dssp EEE-EEEETTEEEEEEEEESS--SSTTEEEEEEEEESSSSEE---EE--GGGS-EEEE--EEEE-SEE-EE-TTS-EEEE
T ss_pred eee-eeecceeEEEEEEEEeccccccccceeeeeccCCcceeeeccc-CCchhccccc--eeecCCCCceEEcCCCEEEE
Confidence 564 344566777776444 2232 33345566654 68987532 2111 1111 111 145566679998877
Q ss_pred EeeecCCCc-ceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEEEE
Q 008686 134 YTGIDAGNK-QVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILY 212 (557)
Q Consensus 134 YTg~~~~~~-~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly 212 (557)
-.+....+. ..-.|.+|+|.+ .+|+-..+ .....++||.|+-. ++|+-.|+.. ..+ |+-.+|
T Consensus 138 v~a~~~~~~~~~SlIiYS~d~g----~~W~lskg---------~s~~gC~~psv~EW-e~gkLlM~~~-c~~--g~rrVY 200 (310)
T PF13859_consen 138 VQATKKNGDGTVSLIIYSTDDG----KTWKLSKG---------MSPAGCSDPSVVEW-EDGKLLMMTA-CDD--GRRRVY 200 (310)
T ss_dssp EEEEETT---EEEEEEEESSTT----SS-EE-S-------------TT-EEEEEEEE--TTEEEEEEE--TT--S---EE
T ss_pred EeeeccCccceEEEEEEECCCc----cceEeccc---------cCCCCcceEEEEec-cCCeeEEEEe-ccc--ceEEEE
Confidence 777665555 366788998864 78985322 12257889997755 5778777743 322 445689
Q ss_pred EeCCC-CCCEEccc
Q 008686 213 RSKDF-VNWTKAEQ 225 (557)
Q Consensus 213 ~S~Dl-~~W~~~~~ 225 (557)
+|.|. ..|+..-.
T Consensus 201 eS~DmG~tWtea~g 214 (310)
T PF13859_consen 201 ESGDMGTTWTEALG 214 (310)
T ss_dssp EESSTTSS-EE-TT
T ss_pred EEcccceehhhccC
Confidence 99886 78997543
No 82
>COG3940 Predicted beta-xylosidase [General function prediction only]
Probab=90.76 E-value=1.4 Score=42.79 Aligned_cols=102 Identities=15% Similarity=0.272 Sum_probs=64.6
Q ss_pred eEEECC-EEEEEEEEe--cCCCeEEEEEEeCCCCcceecCCCC-CCCCCcCCCceEe--eeEEEccCCeEEEEEeeecCC
Q 008686 67 PMIYKG-IYHFFYQYK--LWDTVVWGHSTSTDMVNWTPHDAAI-YPSQPFDANSCWS--GSVTILPGGNPAVLYTGIDAG 140 (557)
Q Consensus 67 ~~~~~G-~YHlfyq~~--~~g~~~Wgha~S~DlvhW~~~~~aL-~P~~~~d~~gv~S--Gsav~~~dg~~~l~YTg~~~~ 140 (557)
.++++| .|+++-|.. .-|+..+..|.-.+-.+-+-.|+.| .|.-+|+..|.|- |.||+..+|++.+-|++...+
T Consensus 137 tfeh~gk~yyvwaqkdp~i~gnsniyiaemenpwtikgepvmlskpe~dwe~~gfwvnegpav~k~ngkifi~ysasatd 216 (324)
T COG3940 137 TFEHNGKLYYVWAQKDPNIKGNSNIYIAEMENPWTIKGEPVMLSKPELDWEIKGFWVNEGPAVLKKNGKIFITYSASATD 216 (324)
T ss_pred eeeeCCEEEEEEeccCCCccCCcceEEEeccCCceecCceEEecCCCcccEEEEEEecCCceEEEECCEEEEEEeccccc
Confidence 345666 577777776 5677777777766643333345555 4556788778664 888887899999999876543
Q ss_pred CcceEEEEEEcCC---CCCccceeecCCCCceEe
Q 008686 141 NKQVQNLAVPKNL---SDPYLKEWIKPPENPLMV 171 (557)
Q Consensus 141 ~~~~q~lA~s~d~---~d~~l~~w~k~~~~Pvi~ 171 (557)
-.-..+|-+.... -|+ .+|+|.+ .||+.
T Consensus 217 ~nycmgllwanen~dlldp--aswtksp-tpvf~ 247 (324)
T COG3940 217 VNYCMGLLWANENSDLLDP--ASWTKSP-TPVFK 247 (324)
T ss_pred cceeeeeeeecccCCcCCc--hhcccCC-Cccee
Confidence 2222333333222 233 5899974 78884
No 83
>COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]
Probab=88.51 E-value=9.9 Score=41.94 Aligned_cols=111 Identities=16% Similarity=0.125 Sum_probs=66.6
Q ss_pred CCCCCC--cCCCceEeeeEEEccCCeEEEEEeeecC---CCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCC
Q 008686 106 IYPSQP--FDANSCWSGSVTILPGGNPAVLYTGIDA---GNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGS 180 (557)
Q Consensus 106 L~P~~~--~d~~gv~SGsav~~~dg~~~l~YTg~~~---~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~ 180 (557)
+.|... .|.+| ++..+|+|++||-=+.. .+...=+.|+|+| |.+|+.. .+++.|...++...
T Consensus 34 ftP~~G~mNDPNG------~iy~~G~yHlFYQ~~P~~~~~g~~~WgHa~S~D-----lv~W~~~--piaL~Pd~~~d~~g 100 (486)
T COG1621 34 FTPPTGWLNDPNG------LIYFDGKYHLFYQYNPFGAAHGPKHWGHAVSKD-----LVHWEHL--PIALAPDDDYDSHG 100 (486)
T ss_pred ecCCcCceECCCc------eeEECCEEEEEEecCCCCCCCCCceeeeeccCC-----cccceEC--CceecCCCccccCC
Confidence 445443 36666 33348999999975432 1334447799987 5899974 24555555445555
Q ss_pred ccCCeEEEecCCCeEEEEEeeecC---Ccc-EEEEEEeCCCCCCEEc-ccccccC
Q 008686 181 FRDPTTAWIGPDKIWRVIIGSKIN---DTG-LAILYRSKDFVNWTKA-EQSLYST 230 (557)
Q Consensus 181 fRDP~V~~~~~~g~~~m~~ga~~~---~~G-~i~ly~S~Dl~~W~~~-~~~~~~~ 230 (557)
..--.+|-. .++.+.|+-|...+ .+. .=.++.|+|..++++. +.++...
T Consensus 101 ~ySGSAV~~-~~~l~lfytg~v~~~~~~r~~~Q~iA~s~dg~~f~K~~~~~i~~~ 154 (486)
T COG1621 101 CYSGSAVVD-DGNLSLFYTGNVRDSNGIRQQTQCIAYSEDGGTFEKYSGNPIIDQ 154 (486)
T ss_pred ceeeeEEEe-CCcEEEEEccceeccCCcceeEEEEEEEcCCCceEeccCCceecC
Confidence 555554433 46677777665442 122 2357888888888773 5555543
No 84
>PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A ....
Probab=84.65 E-value=36 Score=36.93 Aligned_cols=124 Identities=15% Similarity=0.183 Sum_probs=81.1
Q ss_pred CCEEEEEEEEe-----cCC-----CeEEEEEEeCC----CCcceecCCCCCCCCCcCC-------CceEeeeEEEc-cCC
Q 008686 71 KGIYHFFYQYK-----LWD-----TVVWGHSTSTD----MVNWTPHDAAIYPSQPFDA-------NSCWSGSVTIL-PGG 128 (557)
Q Consensus 71 ~G~YHlfyq~~-----~~g-----~~~Wgha~S~D----lvhW~~~~~aL~P~~~~d~-------~gv~SGsav~~-~dg 128 (557)
+|+..|||... .-. ...-++..+.| +-.|+.+.+.+.|++.+.. ...-.+.++.+ .+|
T Consensus 143 dg~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~~~v~i~g~~~~~~lfe~DG~~Yqt~~Q~~~~afRDP~~f~DP~~G 222 (428)
T PF02435_consen 143 DGSIQLFYTAVGFSDTPTFRQRLATATLGLIHADDDGVWITGFSNHHELFEGDGKHYQTYEQNPGYAFRDPHVFEDPEDG 222 (428)
T ss_dssp TSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECSTEEEEEEEEEEEEEES--SSSB--HHHHHH---EEEEEEEETTTT
T ss_pred CCeEEEEEeecccCCCcchhhhhhhHhcCeeecCCCceeEccccceeEeeccchhhhhChhhcCCccccCCeeEECCCCC
Confidence 69999999995 111 24556777777 5577777777888875321 34567888876 589
Q ss_pred eEEEEEeeecCC--------C------------------------cceEEEEEEcCCCCCccceeecCCCCceEecCCCC
Q 008686 129 NPAVLYTGIDAG--------N------------------------KQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQI 176 (557)
Q Consensus 129 ~~~l~YTg~~~~--------~------------------------~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~ 176 (557)
+.||++.|+... + ...++||...+.. ...|+-+ .|+|....
T Consensus 223 ~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~---~~~w~~~--~PL~~a~~-- 295 (428)
T PF02435_consen 223 KRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGAIGIAKLTNDD---GTVWELL--PPLLSANG-- 295 (428)
T ss_dssp EEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTT---TSEEEEE--EEEEEETT--
T ss_pred cEEEEEecccCCCCCccccCccccccccccccccccccccccceecceeeeEEecCCC---CCccEEe--Ccceeccc--
Confidence 999999987531 0 1236788877643 3568875 48996532
Q ss_pred CCCCccCCeEEEecCCCeEEEEEeeec
Q 008686 177 DPGSFRDPTTAWIGPDKIWRVIIGSKI 203 (557)
Q Consensus 177 ~~~~fRDP~V~~~~~~g~~~m~~ga~~ 203 (557)
-.....-|.||.+ +|+||++..++.
T Consensus 296 v~de~ERP~iv~~--~gkyYLFt~s~~ 320 (428)
T PF02435_consen 296 VNDELERPHIVFM--NGKYYLFTISHL 320 (428)
T ss_dssp TBS-EEEEEEEEE--TTEEEEEEEEEG
T ss_pred ccccccCCcEEEE--CCEEEEEEEecc
Confidence 1345677887655 899999988875
No 85
>COG3940 Predicted beta-xylosidase [General function prediction only]
Probab=79.91 E-value=63 Score=31.63 Aligned_cols=197 Identities=15% Similarity=0.244 Sum_probs=102.2
Q ss_pred cCCcceEEE--CCEEEEEEEEe--cCCCeEEEEEEeCCCCcceecCCCCCCCCC--cCCCceEeeeEEEccCCeEEEEEe
Q 008686 62 NDPNGPMIY--KGIYHFFYQYK--LWDTVVWGHSTSTDMVNWTPHDAAIYPSQP--FDANSCWSGSVTILPGGNPAVLYT 135 (557)
Q Consensus 62 nDPnG~~~~--~G~YHlfyq~~--~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~--~d~~gv~SGsav~~~dg~~~l~YT 135 (557)
.|| .+|. || |+.| ... .........|.|-+.+.=.+ |++++...+ --..-+|.+.+-.. +|++|+|+.
T Consensus 14 adp--~iykh~dg-~yyf-tasvpeydrie~rraktleglr~ae-pvvvwrk~esgpms~liwapeih~i-ngkwyiyfa 87 (324)
T COG3940 14 ADP--MIYKHNDG-YYYF-TASVPEYDRIEVRRAKTLEGLRNAE-PVVVWRKHESGPMSNLIWAPEIHFI-NGKWYIYFA 87 (324)
T ss_pred cCc--eEEEccCc-cEEE-EeccCccceeeeeeccchhhhhccC-ceeEEeccCCCchhhcccccceeEE-cceEEEEEe
Confidence 488 3453 77 3333 333 55677788888888765322 333332221 11234677776554 999999997
Q ss_pred eecC----C-CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeec-CCcc--
Q 008686 136 GIDA----G-NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI-NDTG-- 207 (557)
Q Consensus 136 g~~~----~-~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~-~~~G-- 207 (557)
+... . -.+....+.-....+|+-..|... +-|..+-+. .--|...+ . .+|+-|.++.-+. +-.|
T Consensus 88 aa~ta~~k~g~f~hrmfvlene~anpltg~w~ek--gqikt~wes----fsldattf-e-h~gk~yyvwaqkdp~i~gns 159 (324)
T COG3940 88 AAPTANIKDGTFNHRMFVLENENANPLTGNWVEK--GQIKTAWES----FSLDATTF-E-HNGKLYYVWAQKDPNIKGNS 159 (324)
T ss_pred ecCcccccccccceeEEEEecCCCCCCcccceec--ceeccchhc----ceeeeeee-e-eCCEEEEEEeccCCCccCCc
Confidence 6542 1 123334444444446666677653 333332111 11366543 3 3454444444433 3334
Q ss_pred EEEEEEeCCCCCCEEcccccccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecCCceeEEEEEEE
Q 008686 208 LAILYRSKDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYYTIGTY 282 (557)
Q Consensus 208 ~i~ly~S~Dl~~W~~~~~~~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~~~~~~Y~vG~~ 282 (557)
-|.++..++ -|+-.++++.-......|||--|.--. |+..+. .+.|-.+.+|...+ ...|.+|-+
T Consensus 160 niyiaemen--pwtikgepvmlskpe~dwe~~gfwvne--gpav~k-----~ngkifi~ysasat-d~nycmgll 224 (324)
T COG3940 160 NIYIAEMEN--PWTIKGEPVMLSKPELDWEIKGFWVNE--GPAVLK-----KNGKIFITYSASAT-DVNYCMGLL 224 (324)
T ss_pred ceEEEeccC--CceecCceEEecCCCcccEEEEEEecC--CceEEE-----ECCEEEEEEecccc-ccceeeeee
Confidence 455555555 599888776544455679997754433 532211 11244444554322 345888864
No 86
>KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism]
Probab=79.57 E-value=17 Score=39.82 Aligned_cols=136 Identities=18% Similarity=0.256 Sum_probs=74.6
Q ss_pred CcceecCCCCCCCCCcCCCceEeeeEEEccCCeEEEEEeeecCC---CcceEEEEEEcCCCCCccceeecCCCCceEecC
Q 008686 97 VNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAG---NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPA 173 (557)
Q Consensus 97 vhW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~YTg~~~~---~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p 173 (557)
-++.+....+.|...|= .|. +. .+|.|+|||-=+..+ +...=+.|+|+| |++|+.++ |.|.|.
T Consensus 46 n~~~Rp~~HFqP~k~wM-----N~P-~~-ykG~yHLFyQyNP~gavwg~ivWGHavSkD-----LinW~~lp--~Ai~Ps 111 (571)
T KOG0228|consen 46 NQPDRPGFHFQPPKGWM-----NDP-MY-YKGKYHLFYQYNPKGAVWGNIVWGHAVSKD-----LINWEALP--PAIAPS 111 (571)
T ss_pred cccCCceeecCCCcccc-----cCc-cc-cCcEEEEEEecCCCCceeeeeEeeeecchh-----hccccccC--cccCCC
Confidence 34444445555655442 122 33 489999999755442 335557899988 69999864 666554
Q ss_pred CCCC-CCCccCCeEEEecCCCeEEEEEeeecCCccEEEEEEe-CC-----CCCCEEccc-ccccCC-----CCCceeecc
Q 008686 174 DQID-PGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRS-KD-----FVNWTKAEQ-SLYSTN-----QSGMWECPD 240 (557)
Q Consensus 174 ~~~~-~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly~S-~D-----l~~W~~~~~-~~~~~~-----~~~~~ECPd 240 (557)
...+ ...|---.++ . .+|+=.|++.+-.....+|..|.- .| |+.|...+. ++..++ ....+-=|-
T Consensus 112 ~~~ding~wSGSati-~-~~~~~vilytg~d~~~rqVqn~a~p~d~sdp~l~~w~k~~gnp~~~p~~V~~in~s~FRDPt 189 (571)
T KOG0228|consen 112 EWFDINGCWSGSATI-D-PNNSPVILYTGIDPNNRQVQNYAYPKDVSDPQLIAWSKDGGNPFMKPDKVLGINSSQFRDPT 189 (571)
T ss_pred CccccCccccceEEE-c-cCCCeEEEecccCcCceEEEEEeccCCCCchhhheeecCCCceeeccccccCCChhhccCCc
Confidence 3222 1233333332 3 467777777655544567777764 23 467776543 333222 122455555
Q ss_pred eEEecCCC
Q 008686 241 FFPVSTKS 248 (557)
Q Consensus 241 lf~l~~~g 248 (557)
.+-.+..|
T Consensus 190 taW~~~dg 197 (571)
T KOG0228|consen 190 TAWFGQDG 197 (571)
T ss_pred eeeecCCC
Confidence 55555333
No 87
>PTZ00334 trans-sialidase; Provisional
Probab=72.11 E-value=32 Score=40.21 Aligned_cols=88 Identities=17% Similarity=0.165 Sum_probs=55.5
Q ss_pred eeEEEccCCeEEEEEeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEE
Q 008686 120 GSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVII 199 (557)
Q Consensus 120 Gsav~~~dg~~~l~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ 199 (557)
||.|+.+||++++=-.+...++...-.|.+|+|.+ +|+-..+ .....++||.|+-. ++|+-.|+.
T Consensus 263 GSGI~medGTLVFPv~a~~~~g~~vslIiYS~d~g-----~W~ls~g---------~s~~gC~~P~I~EW-e~gkLlM~t 327 (780)
T PTZ00334 263 GSGVQMKDGTLVFPVEGTKKDGKAVSLIIYSSATE-----SGNLSKG---------MSADGCSDPSVVEW-KEGKLMMMT 327 (780)
T ss_pred cCeEEecCCeEEEEEEEEcCCCCEEEEEEEecCCC-----CeEEcCC---------CCCCCCCCCEEEEE-cCCeEEEEE
Confidence 44455568998765566555555566778888753 4753221 12347899997755 457777764
Q ss_pred eeecCCccEEEEEEeCCC-CCCEEccc
Q 008686 200 GSKINDTGLAILYRSKDF-VNWTKAEQ 225 (557)
Q Consensus 200 ga~~~~~G~i~ly~S~Dl-~~W~~~~~ 225 (557)
. ..+ |+=.+|+|.|. ..|+..-.
T Consensus 328 ~-C~d--G~RrVYES~DmG~tWtEAlG 351 (780)
T PTZ00334 328 A-CDD--GRRRVYESGDKGDSWTEALG 351 (780)
T ss_pred E-eCC--CCEEEEEECCCCCChhhCCC
Confidence 4 322 33368999886 78986643
No 88
>PF13810 DUF4185: Domain of unknown function (DUF4185)
Probab=67.21 E-value=26 Score=36.53 Aligned_cols=93 Identities=15% Similarity=0.272 Sum_probs=53.3
Q ss_pred cCCeEEEEEeeecCCC-------cceEEEEEEcCCCCCccceeecCCCCceEecC---CCCCCCCccCCeEEEecCCCeE
Q 008686 126 PGGNPAVLYTGIDAGN-------KQVQNLAVPKNLSDPYLKEWIKPPENPLMVPA---DQIDPGSFRDPTTAWIGPDKIW 195 (557)
Q Consensus 126 ~dg~~~l~YTg~~~~~-------~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p---~~~~~~~fRDP~V~~~~~~g~~ 195 (557)
.+|+.||.|..+..-+ .....||.|.|.+ .+|++.+ ..+-... ++...........-+. .++.|
T Consensus 103 v~~~~Yl~~msv~~wg~~~G~W~tn~S~i~~S~D~G----~tW~~~~-~~~~~~~~~~~g~~~~~~~fq~~a~~-~~dgy 176 (316)
T PF13810_consen 103 VGGRQYLHYMSVRNWGNVPGSWTTNYSGIAYSDDNG----ETWTVVP-GTIRPNSPFHPGFNQGNWNFQMAAFV-KDDGY 176 (316)
T ss_pred ECCcEEEEEEEEccCCCCCCccccCceEEEEeCCCC----CCceeCC-CcccccccccCCcccccccccccccc-CCCCE
Confidence 3889999999875311 1256899999975 7999864 2222222 1111001111111123 34557
Q ss_pred EEEEeeecCCccEEEEEEe-----CCCCCCEEcc
Q 008686 196 RVIIGSKINDTGLAILYRS-----KDFVNWTKAE 224 (557)
Q Consensus 196 ~m~~ga~~~~~G~i~ly~S-----~Dl~~W~~~~ 224 (557)
+-++|......|.+.|+|. .|+..|+|..
T Consensus 177 VYv~gt~~~R~g~~~LaRV~~~~i~d~~ayeyw~ 210 (316)
T PF13810_consen 177 VYVYGTPFGRNGGVYLARVPPDDILDRSAYEYWD 210 (316)
T ss_pred EEEEeCCCCCCCcEEEEEeCHHHCCChhhccccC
Confidence 7677775555667889986 3555677664
No 89
>PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process
Probab=63.43 E-value=1.7e+02 Score=29.42 Aligned_cols=139 Identities=16% Similarity=0.281 Sum_probs=73.4
Q ss_pred CCcceEEE--CCEEEEEEEEecCCCeEEEEEEeCCCC---cceecCCCCCCCCC-cCCCceEeeeEEEccCCeEEEEEee
Q 008686 63 DPNGPMIY--KGIYHFFYQYKLWDTVVWGHSTSTDMV---NWTPHDAAIYPSQP-FDANSCWSGSVTILPGGNPAVLYTG 136 (557)
Q Consensus 63 DPnG~~~~--~G~YHlfyq~~~~g~~~Wgha~S~Dlv---hW~~~~~aL~P~~~-~d~~gv~SGsav~~~dg~~~l~YTg 136 (557)
-|. |+|+ +.+|+|.|| ||+......||+|.- -|.... .|..+.- -...|..+-.+|- ++-..|||+++
T Consensus 78 AP~-vFYFaPk~~W~L~yQ---wg~~~fsY~Ts~DptnpngWSapq-~lf~g~i~~~~~g~iD~~vI~-D~~n~yLFfa~ 151 (271)
T PF03664_consen 78 APQ-VFYFAPKNIWYLAYQ---WGPAAFSYSTSSDPTNPNGWSAPQ-PLFSGSISGSGTGPIDQWVIC-DDTNMYLFFAG 151 (271)
T ss_pred cce-EEEecCCcEEEEEEe---cCCCcceeecCCCCCCCccCCCCc-ccccccccCCCCCceeeEEEe-cCCceEEEEcC
Confidence 564 6666 789999999 466667788999985 487543 3544431 1123444555543 36678999987
Q ss_pred ecCCCcceEEEEEEcCCCCCccceeecCCCCceE--ecCCCCCCCCccCCeEEEecC-CCeEEEEEeeecCCccEEEEEE
Q 008686 137 IDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLM--VPADQIDPGSFRDPTTAWIGP-DKIWRVIIGSKINDTGLAILYR 213 (557)
Q Consensus 137 ~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi--~~p~~~~~~~fRDP~V~~~~~-~g~~~m~~ga~~~~~G~i~ly~ 213 (557)
-+ +..-+-.+.+..-+ ..|. ..+++ .... ..-|.-+. ||+-+ .++|+|++=+.. ..|+ .||
T Consensus 152 Dn-GkiYRs~~~i~nFP-----~~fg---s~~~vvmsd~~---~nLFEA~~-VYkv~G~~~YLmiVEaiG-s~gR--yFR 215 (271)
T PF03664_consen 152 DN-GKIYRSSMPIGNFP-----GGFG---SSYTVVMSDTR---NNLFEAVQ-VYKVKGQNQYLMIVEAIG-SDGR--YFR 215 (271)
T ss_pred CC-CcEEEeccchhhCC-----CCCC---CceEEEEecCc---cceeeeeE-EEEEcCCceEEEEEEEec-CCCc--EEE
Confidence 54 21111111111111 1121 12333 2221 23455665 45532 479999986654 2233 455
Q ss_pred e---CCC-CCCEEc
Q 008686 214 S---KDF-VNWTKA 223 (557)
Q Consensus 214 S---~Dl-~~W~~~ 223 (557)
| ..| -.|+..
T Consensus 216 SfTa~sL~G~Wtp~ 229 (271)
T PF03664_consen 216 SFTATSLDGPWTPQ 229 (271)
T ss_pred eeecCCCCCcceec
Confidence 4 555 367654
No 90
>PF00337 Gal-bind_lectin: Galactoside-binding lectin; InterPro: IPR001079 Galectins (also known as galaptins or S-lectin) are a family of proteins defined by having at least one characteristic carbohydrate recognition domain (CRD) with an affinity for beta-galactosides and sharing certain sequence elements. Members of the galectins family are found in mammals, birds, amphibians, fish, nematodes, sponges, and some fungi. Galectins are known to carry out intra- and extracellular functions through glycoconjugate-mediated recogntion. From the cytosol they may be secreted by non-classical pathways, but they may also be targeted to the nucleus or specific sub-cytosolic sites. Within the same peptide chain some galectins have a CRD with only a few additional amino acids, whereas others have two CRDs joined by a link peptide, and one (galectin-3) has one CRD joined to a different type of domain [, ]. The galectin carbohydrate recognition domain (CRD) is a beta-sandwich of about 135 amino acid. The two sheets are slightly bent with 6 strands forming the concave side and 5 strands forming the convex side. The concave side forms a groove in which carbohydrate is bound, and which is long enough to hold about a linear tetrasaccharide [, ].; GO: 0005529 sugar binding; PDB: 2WSU_B 2WT0_A 2WT1_A 2WT2_B 2WSV_A 1HLC_A 2ZGQ_A 3M3Q_B 1WW5_C 3M3E_A ....
Probab=42.25 E-value=2.1e+02 Score=25.27 Aligned_cols=25 Identities=16% Similarity=0.227 Sum_probs=21.3
Q ss_pred CCCeEEEEEEEeCCeEEEEecCCceE
Q 008686 489 VHEKLSIRSLIDRSIVESFGGGGKAC 514 (557)
Q Consensus 489 ~~~~~~LrIfvD~S~vEVFvNdG~~~ 514 (557)
.++..+|+|.+.....+|++|| ...
T Consensus 81 ~g~~F~i~I~~~~~~f~I~vng-~~~ 105 (133)
T PF00337_consen 81 PGQPFEIRIRVEEDGFKIYVNG-KHF 105 (133)
T ss_dssp TTSEEEEEEEEESSEEEEEETT-EEE
T ss_pred CCceEEEEEEEecCeeEEEECC-eEE
Confidence 3688999999999999999985 443
No 91
>PF06905 FAIM1: Fas apoptotic inhibitory molecule (FAIM1); InterPro: IPR010695 This family consists of several fas apoptotic inhibitory molecule (FAIM) proteins. FAIM expression is upregulated in B cells by anti-Ig treatment that induces Fas-resistance, and overexpression of FAIM diminishes sensitivity to Fas-mediated apoptosis of B and non-B cell lines. FAIM is highly evolutionarily conserved and is widely expressed in murine tissues, suggesting that FAIM plays an important role in cellular physiology [].; GO: 0043066 negative regulation of apoptosis; PDB: 3MX7_A 2KW1_A 2KD2_A.
Probab=38.30 E-value=1.1e+02 Score=29.13 Aligned_cols=32 Identities=13% Similarity=0.187 Sum_probs=26.3
Q ss_pred eEEEEEEEeCCeEEEEecCCceEEEEEeecCCC
Q 008686 492 KLSIRSLIDRSIVESFGGGGKACITARIYPTLA 524 (557)
Q Consensus 492 ~~~LrIfvD~S~vEVFvNdG~~~lTsRiyp~~~ 524 (557)
..+.||++|...++||+| |+..=|.+-|.+.+
T Consensus 107 G~~~RIvLdk~t~~vwvn-G~~iet~~eFvd~G 138 (177)
T PF06905_consen 107 GQEYRIVLDKDTMDVWVN-GEKIETEGEFVDDG 138 (177)
T ss_dssp TEEEEEEEETTTTEEEET-TCEE--EEEEETTC
T ss_pred CCEEEEEEEcceEEEEEC-CEEccccceecCCC
Confidence 368999999999999998 68888999998765
No 92
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=25.41 E-value=4.9e+02 Score=26.68 Aligned_cols=48 Identities=19% Similarity=0.238 Sum_probs=28.4
Q ss_pred CCCCCCCCCcCCCceEeeeEEEcc--CCeEEE--EEeeecCCCcceEEEEEEcCC
Q 008686 103 DAAIYPSQPFDANSCWSGSVTILP--GGNPAV--LYTGIDAGNKQVQNLAVPKNL 153 (557)
Q Consensus 103 ~~aL~P~~~~d~~gv~SGsav~~~--dg~~~l--~YTg~~~~~~~~q~lA~s~d~ 153 (557)
.+|-.|.+.+=..+-|.+.+++.. ++.+-. .--|+ ..++-|+|.|.++
T Consensus 66 svAwsp~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGH---EnEVK~Vaws~sG 117 (312)
T KOG0645|consen 66 SVAWSPHGRYLASASFDATVVIWKKEDGEFECVATLEGH---ENEVKCVAWSASG 117 (312)
T ss_pred eeeecCCCcEEEEeeccceEEEeecCCCceeEEeeeecc---ccceeEEEEcCCC
Confidence 466777776656667777777643 344333 22233 2366788888775
No 93
>PF06439 DUF1080: Domain of Unknown Function (DUF1080); InterPro: IPR010496 This is a family of proteins of unknown function.; PDB: 3IMM_B 3NMB_A 3S5Q_A 3OSD_A 3HBK_A 3H3L_A 3U1X_A.
Probab=24.73 E-value=3.6e+02 Score=24.82 Aligned_cols=56 Identities=13% Similarity=0.124 Sum_probs=35.1
Q ss_pred CCCeEEEEEEEeCCeEEEEecCCceEEEEEeecCCC---cCCceEEEEEecCceeEEEEEEEe
Q 008686 489 VHEKLSIRSLIDRSIVESFGGGGKACITARIYPTLA---IHDKAHLYAFNNGTEKVNITSLRA 548 (557)
Q Consensus 489 ~~~~~~LrIfvD~S~vEVFvNdG~~~lTsRiyp~~~---~~~~~~i~~~~~g~~~~~~~~l~~ 548 (557)
.++=.+++|.+..+.+.++|| |+.+++..--.... ..-.++|. ..+ +.+.+.++++
T Consensus 126 ~~~W~~~~I~~~g~~i~v~vn-G~~v~~~~d~~~~~~~~~~G~Igl~--~~~-~~~~frNi~I 184 (185)
T PF06439_consen 126 PGEWNTVRIVVKGNRITVWVN-GKPVADFTDPSFPYSNPTKGPIGLQ--THG-SEVQFRNIKI 184 (185)
T ss_dssp TTSEEEEEEEEETTEEEEEET-TEEEEEEETTSHHHHHHSSBEEEEE--CSS-STEEEEEEEE
T ss_pred CCceEEEEEEEECCEEEEEEC-CEEEEEEEcCCCCCCCCCceEEEEE--eCC-CeEEEEEEEE
Confidence 367889999999999999997 67776665322100 01134443 333 3566777664
No 94
>smart00276 GLECT Galectin. Galectin - galactose-binding lectin
Probab=23.39 E-value=4.6e+02 Score=23.04 Aligned_cols=25 Identities=8% Similarity=0.169 Sum_probs=21.3
Q ss_pred CCCeEEEEEEEeCCeEEEEecCCceE
Q 008686 489 VHEKLSIRSLIDRSIVESFGGGGKAC 514 (557)
Q Consensus 489 ~~~~~~LrIfvD~S~vEVFvNdG~~~ 514 (557)
.+...+|+|.+.....+|+||+ ...
T Consensus 75 ~g~~F~l~i~~~~~~f~i~vng-~~~ 99 (128)
T smart00276 75 PGQPFDLTIIVQPDHFQIFVNG-VHI 99 (128)
T ss_pred CCCEEEEEEEEcCCEEEEEECC-EeE
Confidence 3688999999999999999985 443
No 95
>PF10916 DUF2712: Protein of unknown function (DUF2712); InterPro: IPR020208 This entry represents a group of uncharacterised proteins.
Probab=22.18 E-value=81 Score=28.87 Aligned_cols=51 Identities=10% Similarity=-0.007 Sum_probs=37.5
Q ss_pred ccchhHHHHHHHHhHhhhhhhccccccCCccccccCCCCCCCCCCcccccc
Q 008686 4 SSICLFIFFALFLGHVFVKLEASQHVYRTLQTCQSFSSSITSQPYRTGYHF 54 (557)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~yH~ 54 (557)
-+|..+.+|.+.|+-++...+++-+.+=.++-.-..-++-...+||..-+.
T Consensus 10 ~~~~a~~~~~~~~a~~~~~~Asdn~i~F~F~i~~~~ansys~~ryRqTt~t 60 (146)
T PF10916_consen 10 RLILAAAIGISVFAFVSHAAASDNNIPFSFTIKPNQANSYSGSRYRQTTST 60 (146)
T ss_pred HHHHHHHHHHHHHhhhhhhhhcccCCceEEEeCCcccccccCceeeccCCC
Confidence 356667777788888888888888888777665555666677788887654
No 96
>PF09601 DUF2459: Protein of unknown function (DUF2459); InterPro: IPR011727 This conserved hypothetical protein of unknown function is predominantly found in proteobacteria. Its function is unknown and its genome context is not well-conserved. It is found amid urease genes in at least one species.
Probab=20.53 E-value=48 Score=31.44 Aligned_cols=18 Identities=28% Similarity=0.647 Sum_probs=14.2
Q ss_pred ceEE-ECCEEEEEEEEecC
Q 008686 66 GPMI-YKGIYHFFYQYKLW 83 (557)
Q Consensus 66 G~~~-~~G~YHlfyq~~~~ 83 (557)
..+| .+|.|||||.||.|
T Consensus 133 d~Fy~A~G~Y~l~~TCNtW 151 (173)
T PF09601_consen 133 DAFYEAKGRYSLFNTCNTW 151 (173)
T ss_pred CeeEeeccceEeecCcHHH
Confidence 4555 59999999999933
Done!