Query 008692
Match_columns 557
No_of_seqs 230 out of 1589
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 09:30:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008692.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008692hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ll3_A Gluconate kinase; xylul 100.0 3E-103 1E-107 856.1 46.7 488 7-556 1-491 (504)
2 3ifr_A Carbohydrate kinase, FG 100.0 2E-103 8E-108 857.9 45.6 492 4-557 1-499 (508)
3 3hz6_A Xylulokinase; xylulose, 100.0 4E-101 1E-105 840.7 43.8 483 9-553 4-502 (511)
4 4bc3_A Xylulose kinase; transf 100.0 3E-100 1E-104 838.8 46.3 518 9-553 9-532 (538)
5 3jvp_A Ribulokinase; PSI-II, N 100.0 3.8E-97 1E-101 819.7 40.4 494 9-551 4-539 (572)
6 2itm_A Xylulose kinase, xylulo 100.0 2.8E-96 1E-100 798.5 44.2 480 11-555 1-484 (484)
7 3h3n_X Glycerol kinase; ATP-bi 100.0 6.9E-95 2.4E-99 790.9 45.4 476 9-552 4-496 (506)
8 3l0q_A Xylulose kinase; xlylul 100.0 1.7E-95 6E-100 804.0 40.9 487 9-552 4-538 (554)
9 2p3r_A Glycerol kinase; glycer 100.0 2.9E-95 1E-99 794.2 39.4 478 8-552 1-494 (510)
10 3g25_A Glycerol kinase; IDP007 100.0 1.6E-94 5.5E-99 787.4 45.1 478 6-552 3-497 (501)
11 3ezw_A Glycerol kinase; glycer 100.0 4.1E-95 1.4E-99 796.2 39.6 478 8-550 2-493 (526)
12 4e1j_A Glycerol kinase; struct 100.0 3.9E-94 1.3E-98 786.6 44.6 474 9-551 25-517 (520)
13 2zf5_O Glycerol kinase; hypert 100.0 5.3E-92 1.8E-96 767.1 43.4 472 10-552 3-486 (497)
14 2w40_A Glycerol kinase, putati 100.0 2.1E-91 7.3E-96 763.4 45.0 475 9-551 3-500 (503)
15 2d4w_A Glycerol kinase; alpha 100.0 5.5E-92 1.9E-96 768.0 39.5 474 10-552 2-496 (504)
16 2dpn_A Glycerol kinase; thermu 100.0 2.3E-91 7.8E-96 761.7 42.1 472 10-552 2-490 (495)
17 3i8b_A Xylulose kinase; strain 100.0 1.2E-91 4.1E-96 765.3 37.4 459 9-540 4-506 (515)
18 3h6e_A Carbohydrate kinase, FG 100.0 6.9E-84 2.4E-88 697.3 34.7 450 9-550 5-471 (482)
19 2uyt_A Rhamnulokinase; rhamnos 100.0 3.4E-82 1.2E-86 689.1 29.2 475 7-548 1-486 (489)
20 1hux_A Activator of (R)-2-hydr 99.7 9.4E-18 3.2E-22 167.8 12.8 127 341-494 130-257 (270)
21 3h1q_A Ethanolamine utilizatio 98.9 2.7E-08 9.4E-13 98.6 17.2 71 418-491 201-272 (272)
22 2qm1_A Glucokinase; alpha-beta 98.5 2.2E-07 7.7E-12 94.5 8.0 78 10-112 6-86 (326)
23 1z6r_A MLC protein; transcript 98.3 9.1E-07 3.1E-11 93.1 8.8 78 9-112 84-164 (406)
24 2yhw_A Bifunctional UDP-N-acet 98.3 5E-07 1.7E-11 92.8 6.2 84 2-112 22-108 (343)
25 3vgl_A Glucokinase; ROK family 98.3 5.9E-07 2E-11 91.5 5.2 72 10-111 2-74 (321)
26 2ch5_A NAGK protein; transfera 98.2 5.1E-07 1.8E-11 92.7 2.7 72 10-100 6-80 (347)
27 2hoe_A N-acetylglucosamine kin 98.1 1.9E-06 6.5E-11 89.9 6.1 78 10-112 87-167 (380)
28 4db3_A Glcnac kinase, N-acetyl 98.1 2.7E-06 9.3E-11 86.8 7.0 81 4-112 18-99 (327)
29 1z05_A Transcriptional regulat 98.1 3.6E-06 1.2E-10 89.2 7.8 78 9-112 107-187 (429)
30 2e2o_A Hexokinase; acetate and 98.1 1.6E-06 5.5E-11 87.2 3.4 98 11-147 3-101 (299)
31 4a2a_A Cell division protein F 98.0 7.6E-05 2.6E-09 78.7 15.5 61 418-478 293-360 (419)
32 3r8e_A Hypothetical sugar kina 98.0 1.8E-05 6.2E-10 80.4 9.4 78 8-112 17-95 (321)
33 4htl_A Beta-glucoside kinase; 97.7 2.8E-05 9.6E-10 78.1 6.4 71 10-112 4-75 (297)
34 3htv_A D-allose kinase, alloki 97.7 2.9E-05 9.9E-10 78.5 6.3 75 10-111 7-82 (310)
35 2ews_A Pantothenate kinase; PA 97.7 0.00026 9E-09 70.4 12.7 142 337-491 136-286 (287)
36 1zc6_A Probable N-acetylglucos 97.7 7.1E-05 2.4E-09 75.3 8.7 71 10-100 11-85 (305)
37 3epq_A Putative fructokinase; 97.7 2.8E-05 9.6E-10 78.4 5.5 65 10-109 3-67 (302)
38 1woq_A Inorganic polyphosphate 97.7 3.6E-05 1.2E-09 76.0 5.9 78 10-112 12-91 (267)
39 3vov_A Glucokinase, hexokinase 97.7 1.6E-05 5.5E-10 80.1 3.1 73 11-111 2-75 (302)
40 4ehu_A Activator of 2-hydroxyi 97.6 0.00012 4.3E-09 72.3 8.0 74 418-494 181-255 (276)
41 2i7n_A Pantothenate kinase 1; 97.5 0.00033 1.1E-08 71.6 10.7 75 417-491 276-358 (360)
42 2ap1_A Putative regulator prot 97.4 0.00015 5E-09 73.7 6.2 79 5-111 19-98 (327)
43 3mcp_A Glucokinase; structural 97.4 5.2E-05 1.8E-09 78.4 2.8 77 8-112 7-85 (366)
44 2gup_A ROK family protein; sug 97.3 0.00027 9.1E-09 70.5 7.0 68 11-112 5-73 (292)
45 2aa4_A Mannac kinase, putative 97.3 0.00016 5.4E-09 72.0 4.6 69 11-109 2-70 (289)
46 1zbs_A Hypothetical protein PG 97.1 0.00016 5.5E-09 72.2 2.4 69 11-100 1-69 (291)
47 4b9q_A Chaperone protein DNAK; 97.0 0.00067 2.3E-08 74.9 6.4 77 418-494 304-382 (605)
48 1zxo_A Conserved hypothetical 97.0 0.00012 4.2E-09 73.1 0.0 29 11-40 1-29 (291)
49 4gni_A Putative heat shock pro 96.9 0.0014 4.9E-08 68.4 8.0 76 419-494 316-401 (409)
50 3qfu_A 78 kDa glucose-regulate 96.9 0.0013 4.3E-08 68.3 7.4 76 418-493 314-392 (394)
51 4ehu_A Activator of 2-hydroxyi 96.8 0.0029 9.9E-08 62.4 8.8 30 11-40 2-31 (276)
52 3i33_A Heat shock-related 70 k 96.8 0.0016 5.5E-08 67.9 6.8 76 419-494 323-401 (404)
53 2q2r_A Glucokinase 1, putative 96.7 0.0011 3.7E-08 68.6 5.1 110 9-147 28-143 (373)
54 1dkg_D Molecular chaperone DNA 96.6 0.003 1E-07 65.3 7.1 75 419-493 305-381 (383)
55 1sz2_A Glucokinase, glucose ki 96.3 0.0028 9.5E-08 64.4 5.0 31 8-38 12-43 (332)
56 2v7y_A Chaperone protein DNAK; 95.9 0.0078 2.7E-07 64.9 6.3 76 419-494 274-351 (509)
57 2yhx_A Hexokinase B; transfera 95.9 0.012 4.1E-07 62.4 7.5 74 10-101 61-141 (457)
58 3lm2_A Putative kinase; struct 95.8 0.0049 1.7E-07 59.1 3.8 66 9-110 5-70 (226)
59 3d2f_A Heat shock protein homo 95.8 0.0081 2.8E-07 67.0 5.9 76 419-494 306-383 (675)
60 1yuw_A Heat shock cognate 71 k 95.5 0.014 4.8E-07 63.5 6.5 75 420-494 303-380 (554)
61 3qbx_A Anhydro-N-acetylmuramic 95.5 0.064 2.2E-06 54.7 10.7 103 418-526 257-365 (371)
62 1saz_A Probable butyrate kinas 95.4 0.015 5E-07 60.3 5.6 32 10-42 2-33 (381)
63 1cza_N Hexokinase type I; stru 95.2 0.0097 3.3E-07 68.6 4.0 73 10-100 78-158 (917)
64 3djc_A Type III pantothenate k 95.1 0.02 7E-07 56.1 5.5 67 418-493 186-255 (266)
65 2kho_A Heat shock protein 70; 95.0 0.0082 2.8E-07 66.1 2.5 69 426-494 312-382 (605)
66 1jce_A ROD shape-determining p 94.8 0.014 4.7E-07 59.3 3.4 74 420-493 247-325 (344)
67 3eno_A Putative O-sialoglycopr 94.4 0.085 2.9E-06 53.5 7.9 84 418-506 221-311 (334)
68 3cqy_A Anhydro-N-acetylmuramic 94.2 0.19 6.5E-06 51.3 10.0 85 418-509 264-354 (370)
69 3bex_A Type III pantothenate k 94.2 0.042 1.5E-06 53.3 5.1 65 418-491 182-246 (249)
70 1bdg_A Hexokinase; phosphotran 94.2 0.079 2.7E-06 56.0 7.5 70 10-98 68-143 (451)
71 2ych_A Competence protein PILM 94.0 0.078 2.7E-06 54.4 6.9 61 418-478 275-338 (377)
72 2ivn_A O-sialoglycoprotein end 93.8 0.11 3.8E-06 52.5 7.6 77 418-494 216-299 (330)
73 3ttc_A HYPF, transcriptional r 93.1 0.16 5.6E-06 55.8 7.8 76 418-493 571-651 (657)
74 3vth_A Hydrogenase maturation 93.1 0.12 4.1E-06 58.0 6.9 77 418-494 665-748 (761)
75 3zyy_X Iron-sulfur cluster bin 93.0 0.057 2E-06 59.0 4.0 86 9-99 205-298 (631)
76 2h3g_X Biosynthetic protein; p 93.0 0.11 3.7E-06 51.0 5.6 68 418-494 184-253 (268)
77 2ych_A Competence protein PILM 92.9 0.23 8E-06 50.7 8.4 73 9-99 12-86 (377)
78 2zgy_A Plasmid segregation pro 92.7 0.17 5.9E-06 50.6 6.9 66 421-491 250-319 (320)
79 4g9i_A Hydrogenase maturation 91.1 0.23 7.9E-06 55.9 6.1 77 418-494 677-760 (772)
80 1cza_N Hexokinase type I; stru 90.8 0.21 7.3E-06 57.5 5.6 73 9-98 525-602 (917)
81 3o8m_A Hexokinase; rnaseh-like 89.8 0.44 1.5E-05 50.6 6.6 46 449-494 412-470 (485)
82 3ven_A O-carbamoyltransferase 89.4 0.39 1.3E-05 51.9 5.9 77 418-494 279-358 (576)
83 3t69_A Putative 2-dehydro-3-de 89.3 0.34 1.2E-05 48.6 4.9 47 447-494 259-305 (330)
84 2ivn_A O-sialoglycoprotein end 84.7 1.7 6E-05 43.6 7.3 73 11-98 2-76 (330)
85 3nuw_A 2-OXO-3-deoxygalactonat 84.6 0.74 2.5E-05 45.5 4.3 44 447-491 247-290 (295)
86 2ews_A Pantothenate kinase; PA 84.2 0.91 3.1E-05 44.8 4.8 26 10-36 20-45 (287)
87 3cet_A Conserved archaeal prot 84.2 0.87 3E-05 45.6 4.6 68 418-490 247-321 (334)
88 4apw_A ALP12; actin-like prote 82.6 3 0.0001 41.8 8.0 72 420-493 251-324 (329)
89 3sk3_A Acetate kinase, acetoki 81.7 1.7 5.7E-05 45.0 5.7 47 423-469 314-363 (415)
90 3en9_A Glycoprotease, O-sialog 80.0 2.9 9.8E-05 45.0 7.2 61 418-478 220-283 (540)
91 3en9_A Glycoprotease, O-sialog 79.9 3.6 0.00012 44.2 8.0 77 8-98 4-80 (540)
92 3hm8_A Hexokinase-3; glucose, 78.8 3.1 0.00011 43.4 6.7 46 449-494 386-437 (445)
93 2e2o_A Hexokinase; acetate and 77.9 5.2 0.00018 39.0 7.9 68 423-494 220-288 (299)
94 3eno_A Putative O-sialoglycopr 77.4 3.3 0.00011 41.6 6.3 79 7-98 3-81 (334)
95 4ijn_A Acetate kinase, acetoki 75.7 9.3 0.00032 39.1 9.0 46 422-468 298-346 (398)
96 3r9p_A ACKA; ssgcid, seattle s 74.7 9.3 0.00032 39.0 8.7 46 422-468 289-337 (391)
97 3f9m_A Glucokinase; hexokinase 72.8 3.8 0.00013 43.1 5.5 46 449-494 410-461 (470)
98 3qfu_A 78 kDa glucose-regulate 72.7 1.8 6.2E-05 44.1 3.0 22 10-32 18-39 (394)
99 2fsj_A Hypothetical protein TA 72.1 1.9 6.7E-05 43.5 3.0 66 424-492 272-343 (346)
100 4htl_A Beta-glucoside kinase; 70.7 14 0.00047 36.1 8.9 70 421-494 216-292 (297)
101 2f9w_A Pantothenate kinase; CO 69.6 4.6 0.00016 39.3 4.9 63 418-490 203-267 (271)
102 4gni_A Putative heat shock pro 69.2 2.2 7.4E-05 43.9 2.7 22 10-32 13-34 (409)
103 4gib_A Beta-phosphoglucomutase 68.2 1.2 4.1E-05 42.3 0.4 23 12-34 8-38 (250)
104 2ch5_A NAGK protein; transfera 66.8 14 0.00049 36.6 8.2 74 421-494 232-325 (347)
105 3r8e_A Hypothetical sugar kina 65.9 17 0.00057 35.9 8.4 68 422-493 240-319 (321)
106 3khy_A Propionate kinase; csgi 65.8 15 0.00052 37.3 7.9 46 423-469 289-337 (384)
107 2fxu_A Alpha-actin-1, actin, a 65.5 4.3 0.00015 41.2 4.0 47 448-494 295-350 (375)
108 2gup_A ROK family protein; sug 65.3 19 0.00064 34.8 8.5 70 421-494 206-288 (292)
109 1yuw_A Heat shock cognate 71 k 65.1 3.4 0.00012 44.6 3.3 25 7-32 1-25 (554)
110 2aa4_A Mannac kinase, putative 64.3 14 0.0005 35.5 7.5 68 421-492 212-287 (289)
111 3bzc_A TEX; helix-turn-helix, 63.7 16 0.00055 40.9 8.4 31 9-39 328-359 (785)
112 1dkg_D Molecular chaperone DNA 63.7 2.5 8.4E-05 43.0 1.7 21 11-32 3-23 (383)
113 3i33_A Heat shock-related 70 k 63.0 3.1 0.00011 42.6 2.4 22 10-32 23-44 (404)
114 4db3_A Glcnac kinase, N-acetyl 62.9 12 0.00043 37.0 6.8 68 421-492 248-325 (327)
115 2zgy_A Plasmid segregation pro 62.3 5.1 0.00017 39.7 3.7 23 12-34 2-24 (320)
116 3cer_A Possible exopolyphospha 61.3 10 0.00035 38.1 5.8 21 10-30 16-36 (343)
117 3mdq_A Exopolyphosphatase; str 61.1 11 0.00037 37.5 5.9 43 418-468 268-310 (315)
118 1u6z_A Exopolyphosphatase; alp 60.6 9.7 0.00033 40.6 5.8 24 8-31 9-32 (513)
119 3htv_A D-allose kinase, alloki 60.0 32 0.0011 33.7 9.2 70 421-494 218-300 (310)
120 3psf_A Transcription elongatio 59.7 17 0.00058 42.0 7.8 31 9-39 518-553 (1030)
121 3cj1_A Ectonucleoside triphosp 58.7 6 0.0002 41.6 3.6 21 10-30 34-54 (456)
122 1t6c_A Exopolyphosphatase; alp 57.7 8 0.00027 38.4 4.2 21 11-31 13-33 (315)
123 3cqy_A Anhydro-N-acetylmuramic 57.6 24 0.00081 35.8 7.7 86 7-100 2-101 (370)
124 2qm1_A Glucokinase; alpha-beta 57.6 12 0.00042 36.7 5.7 50 260-314 100-154 (326)
125 2yhw_A Bifunctional UDP-N-acet 57.2 22 0.00075 35.3 7.5 50 260-314 123-177 (343)
126 4b9q_A Chaperone protein DNAK; 57.2 4.8 0.00016 43.9 2.7 19 10-28 2-20 (605)
127 1sz2_A Glucokinase, glucose ki 56.1 30 0.001 34.1 8.3 69 422-494 244-327 (332)
128 1zbs_A Hypothetical protein PG 54.7 23 0.00079 34.3 7.0 70 421-494 210-281 (291)
129 1vhx_A Putative holliday junct 54.6 9.1 0.00031 33.6 3.6 25 11-35 4-28 (150)
130 3vgl_A Glucokinase; ROK family 54.6 29 0.00097 34.1 7.8 69 422-494 232-313 (321)
131 2yhx_A Hexokinase B; transfera 53.8 24 0.00083 36.9 7.3 47 448-494 385-443 (457)
132 2iir_A Acetate kinase; transfe 52.5 30 0.001 35.5 7.4 48 423-471 298-348 (403)
133 1saz_A Probable butyrate kinas 52.4 22 0.00077 36.1 6.7 70 423-492 270-347 (381)
134 2hoe_A N-acetylglucosamine kin 52.0 48 0.0016 33.4 9.1 70 421-494 293-372 (380)
135 4ep4_A Crossover junction endo 51.0 36 0.0012 30.3 7.0 22 11-32 2-23 (166)
136 3psi_A Transcription elongatio 50.3 30 0.001 40.8 7.9 31 9-39 515-550 (1219)
137 2v7y_A Chaperone protein DNAK; 48.4 9.5 0.00033 40.5 3.2 19 11-29 3-21 (509)
138 1hjr_A Holliday junction resol 48.3 35 0.0012 30.1 6.4 23 11-33 2-24 (158)
139 2a6a_A Hypothetical protein TM 47.8 33 0.0011 32.0 6.5 62 11-98 13-74 (218)
140 2kho_A Heat shock protein 70; 47.7 7.8 0.00027 42.2 2.4 21 11-32 3-23 (605)
141 3r6m_A YEAZ, resuscitation pro 47.4 53 0.0018 30.4 7.8 62 11-98 3-64 (213)
142 1zxo_A Conserved hypothetical 46.8 5.7 0.0002 38.7 1.1 67 422-493 209-278 (291)
143 4apw_A ALP12; actin-like prote 46.4 10 0.00035 37.8 2.9 24 1-27 1-24 (329)
144 3hi0_A Putative exopolyphospha 45.8 28 0.00094 37.0 6.3 33 10-42 15-50 (508)
145 1z6r_A MLC protein; transcript 44.9 69 0.0023 32.4 9.1 49 261-314 179-232 (406)
146 4h0p_A Acetate kinase; askha ( 44.7 20 0.00068 37.0 4.7 48 423-470 322-377 (438)
147 1bdg_A Hexokinase; phosphotran 44.2 21 0.00071 37.3 5.0 49 263-313 180-229 (451)
148 3qbx_A Anhydro-N-acetylmuramic 43.7 20 0.0007 36.3 4.6 34 10-43 2-39 (371)
149 1z05_A Transcriptional regulat 43.5 82 0.0028 32.2 9.4 67 423-494 338-416 (429)
150 2ap1_A Putative regulator prot 43.5 35 0.0012 33.5 6.3 67 421-491 248-324 (327)
151 1jce_A ROD shape-determining p 43.4 11 0.00037 37.5 2.5 20 11-31 4-23 (344)
152 3o8m_A Hexokinase; rnaseh-like 43.1 31 0.0011 36.3 6.1 59 10-85 80-140 (485)
153 3aap_A Ectonucleoside triphosp 43.0 15 0.00051 37.1 3.5 20 10-29 3-22 (353)
154 3js6_A Uncharacterized PARM pr 42.5 23 0.0008 35.6 4.9 74 418-494 261-337 (355)
155 2gel_A Putative GRAM negative 41.7 46 0.0016 31.2 6.5 62 11-98 2-63 (231)
156 1zc6_A Probable N-acetylglucos 41.6 26 0.00089 34.1 5.0 67 421-494 226-294 (305)
157 3epq_A Putative fructokinase; 40.1 54 0.0019 31.9 7.1 69 422-494 204-290 (302)
158 2q2r_A Glucokinase 1, putative 40.0 60 0.0021 32.5 7.6 68 422-493 284-371 (373)
159 1nbw_A Glycerol dehydratase re 39.4 17 0.00059 38.9 3.3 35 446-480 550-585 (607)
160 2e1z_A Propionate kinase; TDCD 39.2 37 0.0013 34.9 5.7 48 423-470 306-355 (415)
161 3d2f_A Heat shock protein homo 38.5 12 0.00043 41.2 2.2 18 12-29 4-21 (675)
162 3vov_A Glucokinase, hexokinase 37.7 41 0.0014 32.7 5.7 69 422-494 217-296 (302)
163 1woq_A Inorganic polyphosphate 37.2 40 0.0014 32.0 5.5 59 430-494 202-262 (267)
164 4h0o_A Acetate kinase; askha ( 36.5 33 0.0011 35.0 4.8 48 421-469 300-350 (404)
165 2d0o_A DIOL dehydratase-reacti 36.0 46 0.0016 35.6 5.9 36 446-481 548-584 (610)
166 1k8k_A ARP3, actin-like protei 35.4 12 0.00042 38.3 1.5 48 447-494 316-388 (418)
167 2d0o_A DIOL dehydratase-reacti 35.0 14 0.00047 39.6 1.7 32 9-40 1-36 (610)
168 1g99_A Acetate kinase; alpha/b 33.0 41 0.0014 34.5 4.8 47 423-470 298-347 (408)
169 3hm8_A Hexokinase-3; glucose, 32.6 32 0.0011 35.8 4.0 58 10-84 59-116 (445)
170 1nbw_A Glycerol dehydratase re 31.9 13 0.00045 39.8 1.0 33 9-41 1-36 (607)
171 1iv0_A Hypothetical protein; r 31.7 33 0.0011 27.6 3.2 22 12-33 3-24 (98)
172 3cet_A Conserved archaeal prot 30.8 18 0.00062 36.1 1.7 31 11-42 1-31 (334)
173 2fsj_A Hypothetical protein TA 29.8 27 0.00094 34.8 3.0 22 11-34 22-43 (346)
174 3zx3_A Ectonucleoside triphosp 25.1 40 0.0014 35.2 3.2 21 10-30 34-54 (452)
175 1dw0_A Cytochrome C; asparagin 24.9 16 0.00056 30.3 0.2 29 179-207 83-111 (112)
176 1nu0_A Hypothetical protein YQ 24.0 76 0.0026 27.2 4.3 23 11-33 4-26 (138)
177 3f9m_A Glucokinase; hexokinase 23.4 45 0.0015 34.9 3.2 58 11-84 78-140 (470)
178 1xho_A Chorismate mutase; sout 23.0 82 0.0028 27.2 4.2 32 69-100 47-80 (148)
179 3kts_A Glycerol uptake operon 21.2 52 0.0018 30.0 2.8 59 234-307 121-183 (192)
180 1dbf_A Protein (chorismate mut 21.0 96 0.0033 26.2 4.1 32 69-100 18-51 (127)
No 1
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=100.00 E-value=3e-103 Score=856.10 Aligned_cols=488 Identities=20% Similarity=0.246 Sum_probs=452.6
Q ss_pred CCCcEEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhcC
Q 008692 7 PKDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSL 86 (557)
Q Consensus 7 ~~~~~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~~ 86 (557)
|+++|+||||+|||++|++|||.+|+++++.+++++..+|++|| +||||+ +||++++++++++.+..
T Consensus 1 M~m~~~lgIDiGtts~K~~l~d~~G~il~~~~~~~~~~~p~~g~---~e~dp~----------~~~~~~~~~i~~~~~~~ 67 (504)
T 3ll3_A 1 MSLKYIIGMDVGTTATKGVLYDINGKAVASVSKGYPLIQTKVGQ---AEEDPK----------LIFDAVQEIIFDLTQKI 67 (504)
T ss_dssp -CCEEEEEEEECSSEEEEEEEETTSCEEEEEEEECCCBCSSTTC---CEECHH----------HHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEEEecCCceEEEEEcCCCCEEEEEEeecceecCCCCc---EEECHH----------HHHHHHHHHHHHHHHhC
Confidence 55689999999999999999999999999999999988888876 899988 99999999999987652
Q ss_pred CCCCeeEEEEeccccceEEEcCCCccccccCCCCCCcccccccccCCCCCccccCCCcHHHHHHHHHHhCChHHHHHHhC
Q 008692 87 DLSKVTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTG 166 (557)
Q Consensus 87 ~~~~I~aIgis~~~~~~v~vD~~g~pl~~~~d~~~pl~~~l~~~~~l~~~i~w~D~Ra~~~~~~l~~~~~~~~~~~~~tG 166 (557)
. .+|.+||||+||+++|+||++|+| |+|+|+|+|+|+.++++++.+..+ .++++++||
T Consensus 68 ~-~~I~~Igis~q~~~~v~~D~~G~p--------------------l~~~i~W~D~R~~~~~~~l~~~~~-~~~~~~~tG 125 (504)
T 3ll3_A 68 D-GKIAAISWSSQMHSLIGLGSDDEL--------------------LTNSITWADNCAKSIVQDAKNRGF-AQQIYRKTG 125 (504)
T ss_dssp S-SEEEEEEEEECSSCBEEECTTSCB--------------------SSCEECTTCCTTHHHHHHHHHHTH-HHHHHHHHC
T ss_pred C-CCeEEEEEECCCCcEEEECCCCCC--------------------cccceeCCccCHHHHHHHHHhccC-HHHHHHHHC
Confidence 2 689999999999999999999998 489999999999999999998763 588999999
Q ss_pred CCCCCCChHHHHHHHhhhCChhhhcccceeechhhHHHHHhCCcccccccccccccccccCCCCCcHHHHHHcCCchhhh
Q 008692 167 SRGYERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETDAAGMNLMDIRQRVWSKIVLEATAPSLEEK 246 (557)
Q Consensus 167 ~~~~~~~~~~kl~Wl~~~~pe~~~~~~~~l~~~dyl~~~LTG~~~~~d~s~As~t~l~d~~~~~W~~~ll~~~g~~~~~~ 246 (557)
+++++.++++||+|+++|+||+|+|+++|++++|||.|+|||+++ +|+|+||+|+|||+++++|++++|+.+|.+ +++
T Consensus 126 ~~~~~~~~~~kl~wl~~~~pe~~~~~~~~~~~~dyl~~~LTG~~~-~d~s~As~t~l~d~~~~~W~~~ll~~~gi~-~~~ 203 (504)
T 3ll3_A 126 MPMHPMAPIYKLLWLKNKKTEVFSQAQKWIGIKEYIIFRLTGKLV-TDTTMAAGTGILNLKTLTWDQELLDILKIK-KEQ 203 (504)
T ss_dssp CCSCTTSHHHHHHHHHHHCHHHHHHCCEEECHHHHHHHHHHSCCE-EEHHHHTTTTCBCTTTSSBCHHHHHHHTCC-GGG
T ss_pred CCCCcccHHHHHHHHHHcChHHHHHHhheeCHHHHHHHHHhCCcc-cchhHhhcccCeeCCCCCcCHHHHHHcCCC-HHH
Confidence 999999999999999999999999999999999999999999997 999999999999999999999999999933 799
Q ss_pred cCCcccCCccccccCHHHHHHcCCCCCCeEEEcCChhhhhhhccCCCCCCcEEEEecccceeccccCCCCCCCcceeecC
Q 008692 247 LGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTVFGITDDPEPRLEGHVFPN 326 (557)
Q Consensus 247 LP~i~~~~~~~G~l~~~~a~~~GL~~g~pV~~G~~D~~aa~~g~g~~~~g~~~~~~GTs~~~~~~~~~~~~~~~~~~~~~ 326 (557)
||+|+++++++|+|++++|+++||++||||++|++|++|+++|+|++++|++++++|||+++.+++++|..++.+..+++
T Consensus 204 LP~i~~~~~~~G~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~ 283 (504)
T 3ll3_A 204 LPKIAQPTKVIFPIKTEYVKKLGIDSDTKIILGASDGYLSTIGVNAIDSDHCALNVGTSGAIRTIVDQPKIDPSASYFCY 283 (504)
T ss_dssp SCEEECTTCEECCCCHHHHHHHTCCTTCEEEEEEEHHHHHHHTTTCCSTTEEEEEESSSEEEEEEESSCCCCTTCCSEEE
T ss_pred CCCeeCCcceeeccCHHHHHhcCCCcCCCEEEEccHHHHHHHhCCCCCCCcEEEEechhhhheeeCCCcccCCCCceEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999887776655677
Q ss_pred ccCCCcEEEEEEeechhhHHHHHHHHhcC--chHHHHHHHHhcCCCCCCCeEeEeccCCCCCCCCCCceeeeeecccccc
Q 008692 327 PVDTKGYMIMLVYKNASLTREDVRNRCAE--KSWDVFNKYLQQTPPLNGGKMGFYYKEHEILPPLPVGFHRYILENFEGE 404 (557)
Q Consensus 327 ~~~~g~~~~~~~~~~~G~~~~W~~~~~~~--~~~~~l~~~a~~~~~g~~gl~~lP~l~Ger~P~~~~g~~~~~~~~~~~g 404 (557)
.+.++.|+.+++++++|.+++|+++.+.. ..++++.++++++|||++|++|+|||+|||+|+ |++.+||
T Consensus 284 ~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~~~~~a~~~~~g~~gl~~~P~~~Ger~P~---------~d~~arg 354 (504)
T 3ll3_A 284 PADKTHYLLGGPVNNGGIVFNWARQTLFDADETPQDFLDVAQTAPAGSRNLIFLPYLGGERAPI---------WDANARG 354 (504)
T ss_dssp EEETTEEEEEEEESCSHHHHHHHHHHHTCTTCCHHHHHHHHHTSCTTGGGCEEECCTTCBCTTT---------CBTTCCE
T ss_pred EeCCCeEEEEeehhhHHHHHHHHHHHhccchhHHHHHHHHHhcCCCCCCCeEEecCccCCCCCC---------CCCccCe
Confidence 65578899999999999999999999864 245555668889999999999999999999998 8999999
Q ss_pred cccccccccccCCChhhHHHHHHHHHHHHHHHHHHHcCC-CCCCCEEEEecCCcchhhHHHHHHHHhCCceEEecCCCch
Q 008692 405 TLDGVNEVEVKEFDPPSEVRALVEGQFLSMRGHAERFGL-PSPPRRIIATGGASANQTILSCLASIYGCDIYTVQRPDSA 483 (557)
Q Consensus 405 ~~~Gl~~~~~~~~~~~~l~rAvlEgia~~~r~~~~~l~~-~~~~~~i~~~GGga~s~~w~Qi~Advlg~pv~~~~~~e~~ 483 (557)
+|+|++.. |+++||+||++|||||.+|++++.|++ +.++++|+++||++||++|+||+||++|+||++++..|++
T Consensus 355 ~~~Gl~~~----~~~~~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~e~~ 430 (504)
T 3ll3_A 355 SFVGLTRM----HQKPEMARAVIEGIIFNLYDAASNLIKNTKKPVAINATGGFLKSDFVRQLCANIFNVPIVTMKEQQSG 430 (504)
T ss_dssp EEEEECTT----CCHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSEEEEESGGGCSHHHHHHHHHHHTSCEEEESCSCHH
T ss_pred EEECCCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCchhcCHHHHHHHHHhhCCeEEecCCCCch
Confidence 99999976 799999999999999999999999986 7789999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhccccccCCCCCCHHHHHhhhcccccceeecccccCchhhHHHHHHHHHHHHHHHHHHHHHhcC
Q 008692 484 SLGAALRAAHGYLCSKKGSFVPISNMYKDKLEKTSLSCKLAVTAGDQQLVSKYAVMMKKRLEIENRLVEKLGR 556 (557)
Q Consensus 484 alGAA~lA~~a~~~~~~G~~~~~~~a~~~~~~~~~~~~~P~~~~~~~~~~~~Y~~~y~~y~~l~~~l~~~~~~ 556 (557)
|+|||++|+++ .|.|+|++++. + +.+..++|+|++++ ++.|+++|++|+++|+++++.|++
T Consensus 431 alGaA~lA~~a-----~G~~~~~~~~~-~-~~~~~~~~~P~~~~-----~~~Y~~~y~~y~~l~~~l~~~~~~ 491 (504)
T 3ll3_A 431 TLAAMFLARQA-----LGLNQDLSEIG-Q-FAQADKVYFPNPKE-----AATYQKLFPLYCEIRNALAASYGK 491 (504)
T ss_dssp HHHHHHHHHHH-----TTSCCSGGGGG-G-TSCEEEEECCCHHH-----HHHHHHHHHHHHHHHHHHGGGSGG
T ss_pred hHHHHHHHHHH-----cCccCCHHHHH-H-hcCCCeEEccCHHH-----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999 99999998754 3 55778899999988 999999999999999999998864
No 2
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=100.00 E-value=2.2e-103 Score=857.88 Aligned_cols=492 Identities=16% Similarity=0.167 Sum_probs=451.8
Q ss_pred CCCCCCcEEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHh
Q 008692 4 YSLPKDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLS 83 (557)
Q Consensus 4 ~~~~~~~~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~ 83 (557)
||.++++|+||||+|||++|++|||.+|+++++.+++++..+|++|| +||||+ +||++++++++++.
T Consensus 1 ~~~~~~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~---~e~dp~----------~~~~~i~~~i~~~~ 67 (508)
T 3ifr_A 1 MSLAQGRQVIGLDIGTTSTIAILVRLPDTVVAVASRPTTLSSPHPGW---AEEDPA----------QWWDNARAVLAELK 67 (508)
T ss_dssp ------CEEEEEEECSSEEEEEEEETTTEEEEEEEEECCCBCSSTTC---CEECHH----------HHHHHHHHHHHHHH
T ss_pred CCcccCCEEEEEEecCcceEEEEECCCCCEEEEEEEecceecCCCCc---eEECHH----------HHHHHHHHHHHHHH
Confidence 46677789999999999999999999999999999999988888875 888888 99999999999987
Q ss_pred hc--CCCCCeeEEEEeccccceEEEcCCCccccccCCCCCCcccccccccCCCCCccccCCCcHHHHHHHHHHhCChHHH
Q 008692 84 KS--LDLSKVTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALEL 161 (557)
Q Consensus 84 ~~--~~~~~I~aIgis~~~~~~v~vD~~g~pl~~~~d~~~pl~~~l~~~~~l~~~i~w~D~Ra~~~~~~l~~~~~~~~~~ 161 (557)
+. .++.+|.+||||+||+++|+||++|+| ++|+|+|+|+|+.++++++.+..+ .+++
T Consensus 68 ~~~~~~~~~I~~Igis~~~~~~v~~D~~G~~--------------------l~~~i~W~D~R~~~~~~~l~~~~~-~~~~ 126 (508)
T 3ifr_A 68 TTAGESDWRPGGICVTGMLPAVVLLDDRGAV--------------------LRPSIQQSDGRCGDEVAELRAEVD-SEAF 126 (508)
T ss_dssp HHHCGGGCCEEEEEEEECSSCBEEECTTSCB--------------------CSCEECTTCCCCHHHHHHHHHHSC-HHHH
T ss_pred HhcCCChhheEEEEEECCCCcEEEECCCCCC--------------------cccceeccccChHHHHHHHHhhcc-HHHH
Confidence 53 456789999999999999999999998 489999999999999999999874 5789
Q ss_pred HHHhCCCCCCCChHHHHHHHhhhCChhhhcccceeechhhHHHHHhCCcccccccccccccccccCCCCCcHHHHHHcCC
Q 008692 162 SKLTGSRGYERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETDAAGMNLMDIRQRVWSKIVLEATAP 241 (557)
Q Consensus 162 ~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~~~~~l~~~dyl~~~LTG~~~~~d~s~As~t~l~d~~~~~W~~~ll~~~g~ 241 (557)
+++||+++++.++++||+|+++|+||+|+++++|++++|||.|+|||+.+ +|+|+||+|++||+++++|++++|+.+|.
T Consensus 127 ~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~~~~~l~~~dyl~~~LTG~~~-~d~s~As~t~l~d~~~~~W~~~ll~~~gi 205 (508)
T 3ifr_A 127 LARTGNGVTQQLVTAKLRWIERHEPAVFGAIATVCGSYDYINMLLTGERV-VDRNWALEGGFIDLASGTVEADLVALAHI 205 (508)
T ss_dssp HHHHSSCSSTTSHHHHHHHHHHHCHHHHHTCSEEECHHHHHHHHHHCCCC-EEHHHHHHHTCEETTTTEECHHHHHTTTS
T ss_pred HHHHCCCCChhhHHHHHHHHHHcCHHHHHHHhhhcCchHHHHHHhcCCcc-ccHhHhhcccCccCccCCCCHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999997 99999999999999999999999999993
Q ss_pred chhhhcCCcccCCccccccCHHHHHHcCCCCCCeEEEcCChhhhhhhccCCCCCCcEEEEecccceeccccCCCCCCCcc
Q 008692 242 SLEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTVFGITDDPEPRLEG 321 (557)
Q Consensus 242 ~~~~~LP~i~~~~~~~G~l~~~~a~~~GL~~g~pV~~G~~D~~aa~~g~g~~~~g~~~~~~GTs~~~~~~~~~~~~~~~~ 321 (557)
+ .++||+|+++++++|+|++++|+++||++||||++|++|++|+++|+|++++|++++++|||+++.+++++|..++..
T Consensus 206 ~-~~~LP~i~~~~~~~G~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~ 284 (508)
T 3ifr_A 206 P-PSAVPPAHPTHRVLGAVTAEAAALTGLPTGLPVYGGAADHIASALAAGITRPGDVLLKFGGAGDIIVASATAKSDPRL 284 (508)
T ss_dssp C-GGGSCCEECTTSEEEECCHHHHHHHCCCTTCEEECCEEHHHHHHHHTTCCSTTEEEEEESSSEEEEECBSCCCCBTTB
T ss_pred C-HHHCCCCcCCCCeeeccCHHHHHHhCCCCCCeEEEECchHHHHHHhCCCCCCCcEEEEechhhhheeeCCCcccCCCc
Confidence 3 799999999999999999999999999999999999999999999999999999999999999999999988776666
Q ss_pred eeecCccCCCcEEEEEEeechhhHHHHHHHHhc--Cc--hHHHHHHHHhcCCCCCCCeEeEeccCCCCCCCCCCceeeee
Q 008692 322 HVFPNPVDTKGYMIMLVYKNASLTREDVRNRCA--EK--SWDVFNKYLQQTPPLNGGKMGFYYKEHEILPPLPVGFHRYI 397 (557)
Q Consensus 322 ~~~~~~~~~g~~~~~~~~~~~G~~~~W~~~~~~--~~--~~~~l~~~a~~~~~g~~gl~~lP~l~Ger~P~~~~g~~~~~ 397 (557)
..+++. .+|.|+++++++++|.+++|+++.+. .. +|++|+++++++++|++|++|+|||+|||+|+
T Consensus 285 ~~~~~~-~~g~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~~~l~~~a~~~~~~~~gl~flP~~~Ger~P~--------- 354 (508)
T 3ifr_A 285 YLDYHL-VPGLYAPNGCMAATGSALNWLAKLLAPEAGEAAHAQLDALAAEVPAGADGLVCLPYFLGEKTPI--------- 354 (508)
T ss_dssp BCCBCS-STTCBCCEEEESSSHHHHHHHHHHHSTTCTTHHHHHHHHHHHTSCTTGGGCEEECCTTCCC------------
T ss_pred ceeeee-cCCceEEechhhhhHHHHHHHHHHHhhcCCCCCHHHHHHHHhcCCCCCCCeEEecCCCCCCCCC---------
Confidence 567775 48899999999999999999999983 23 79999999999999999999999999999998
Q ss_pred ecccccccccccccccccCCChhhHHHHHHHHHHHHHHHHHHHcCC-CCCCCEEEEecCCcchhhHHHHHHHHhCCceEE
Q 008692 398 LENFEGETLDGVNEVEVKEFDPPSEVRALVEGQFLSMRGHAERFGL-PSPPRRIIATGGASANQTILSCLASIYGCDIYT 476 (557)
Q Consensus 398 ~~~~~~g~~~Gl~~~~~~~~~~~~l~rAvlEgia~~~r~~~~~l~~-~~~~~~i~~~GGga~s~~w~Qi~Advlg~pv~~ 476 (557)
+++.+||+|+|++.. |+++||+||++|||||.+|++++.|++ |.++++|+++||++||++|+||+||++|+||++
T Consensus 355 ~d~~arg~~~Gl~~~----~~~~~l~rAvlEgia~~~~~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~ 430 (508)
T 3ifr_A 355 HDPFASGTFTGLSLS----HTRGHLWRALLEAVALAFRHHVAVLDDIGHAPQRFFASDGGTRSRVWMGIMADVLQRPVQL 430 (508)
T ss_dssp -CCCCCCEEESCCTT----CCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEESGGGGCHHHHHHHHHHHTSCEEE
T ss_pred CCCCcCEEEECCCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEeCCcccCHHHHHHHHHHhCCeEEe
Confidence 899999999999976 799999999999999999999999986 888999999999999999999999999999999
Q ss_pred ecCCCchhHHHHHHHHhccccccCCCCCCHHHHHhhhcccccceeecccccCchhhHHHHHHHHHHHHHHHHHHHHHhcC
Q 008692 477 VQRPDSASLGAALRAAHGYLCSKKGSFVPISNMYKDKLEKTSLSCKLAVTAGDQQLVSKYAVMMKKRLEIENRLVEKLGR 556 (557)
Q Consensus 477 ~~~~e~~alGAA~lA~~a~~~~~~G~~~~~~~a~~~~~~~~~~~~~P~~~~~~~~~~~~Y~~~y~~y~~l~~~l~~~~~~ 556 (557)
++..|++|+|||++|+++ .|.|+|++++.+ +.+..++|+|++++ ++.|+++|++|+++|++++++|++
T Consensus 431 ~~~~e~~alGaA~lA~~a-----~G~~~~~~~~~~--~~~~~~~~~P~~~~-----~~~y~~~y~~~~~~~~~~~~~~~~ 498 (508)
T 3ifr_A 431 LANPLGSAVGAAWVAAIG-----GGDDLGWDDVTA--LVRTGEKITPDPAK-----AEVYDRLYRDFSALYATLHPFFHR 498 (508)
T ss_dssp EECCSTHHHHHHHHHHHH-----TCSSCCGGGGGG--GSEEEEEECCCGGG-----HHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCCCchHHHHHHHHHHH-----hCCCCCHHHHHh--hcCCCeEECcCHHH-----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999 999999998764 56778899999998 999999999999999999999976
Q ss_pred C
Q 008692 557 R 557 (557)
Q Consensus 557 ~ 557 (557)
+
T Consensus 499 ~ 499 (508)
T 3ifr_A 499 S 499 (508)
T ss_dssp -
T ss_pred h
Confidence 3
No 3
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=100.00 E-value=4e-101 Score=840.67 Aligned_cols=483 Identities=17% Similarity=0.141 Sum_probs=446.9
Q ss_pred CcEEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhc-CC
Q 008692 9 DSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS-LD 87 (557)
Q Consensus 9 ~~~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~-~~ 87 (557)
++|+||||+|||++|++|||.+|+++++.+++++..+|++|| +||||+ +||++++++++++.+. .+
T Consensus 4 m~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~---~e~dp~----------~~~~~~~~~i~~~~~~~~~ 70 (511)
T 3hz6_A 4 AFYIATFDIGTTEVKAALADRDGGLHFQRSIALETYGDGNGP---VEQDAG----------DWYDAVQRIASSWWQSGVD 70 (511)
T ss_dssp CCEEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBSTTSSC---CEECHH----------HHHHHHHHHHHHHHTTTCC
T ss_pred ccEEEEEEeCCCceEEEEECCCCCEEEEEEeecceecCCCCC---EEECHH----------HHHHHHHHHHHHHHhcCCC
Confidence 359999999999999999999999999999999998888875 899988 9999999999987733 45
Q ss_pred CCCeeEEEEeccccceEEEcCCCccccccCCCCCCcccccccccCCCCCccccCCCcHHHHHHHHHHhCChHHHHHHhCC
Q 008692 88 LSKVTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTGS 167 (557)
Q Consensus 88 ~~~I~aIgis~~~~~~v~vD~~g~pl~~~~d~~~pl~~~l~~~~~l~~~i~w~D~Ra~~~~~~l~~~~~~~~~~~~~tG~ 167 (557)
+.+|.+||||+|++++|+||++|+| |+|+|+|+|+|+.++++++.+..+ .++++++||+
T Consensus 71 ~~~I~~Igis~q~~~~v~~D~~G~p--------------------l~~~i~W~D~R~~~~~~~l~~~~~-~~~~~~~tG~ 129 (511)
T 3hz6_A 71 ARRVSAIVLSGQMQNFLPLDQDHEP--------------------LHRAVLYSDKRPLKEAEEINARHG-ADNLWSALEN 129 (511)
T ss_dssp GGGEEEEEEEECCSCBEEECTTSCB--------------------SSCEECTTCCCCHHHHHHHHHHHC-HHHHHHHHSS
T ss_pred hhHeEEEEEecccccEEEECCCcCC--------------------CcCceecCCCCHHHHHHHHHhccC-HHHHHHHHCC
Confidence 6789999999999999999999998 489999999999999999999875 5889999999
Q ss_pred CCCCCChHHHHHHHhhhCChhhhcccceee-chhhHHHHHhCCcccccccccccccccccCCCCCcHHHHHHcCCchhhh
Q 008692 168 RGYERFTGPQIRKLFQTQPGVYDDTERISV-VSSFMASLLIGAYACIDETDAAGMNLMDIRQRVWSKIVLEATAPSLEEK 246 (557)
Q Consensus 168 ~~~~~~~~~kl~Wl~~~~pe~~~~~~~~l~-~~dyl~~~LTG~~~~~d~s~As~t~l~d~~~~~W~~~ll~~~g~~~~~~ 246 (557)
++++.++++||+|+++|+||+|+++++|++ ++|||.|+|||+++ +|+|+||+|+|||+++++|++++|+.+|.+ +++
T Consensus 130 ~~~~~~~~~kl~wl~~~~p~~~~~~~~~l~~~~dyl~~~LTG~~~-~d~s~As~t~l~d~~~~~W~~~ll~~~gi~-~~~ 207 (511)
T 3hz6_A 130 PMTAASILPKLVFWRASFPQAFGRLRHVVLGAKDYVVLRLTGRHA-TDRTNASTTGLYRPKDDAWHVELLADYGFS-LDL 207 (511)
T ss_dssp CCSTTSHHHHHHHHHHHCHHHHTTCCEEECSHHHHHHHHHHSCCE-ECHHHHHHTTCEETTTTEECHHHHHHTTCC-GGG
T ss_pred CCCchhHHHHHHHHHHhChHHHHHHHHHhcCcHHHHHHHHhCCce-eeHhHhhcccceeCCCCCcCHHHHHHhCCC-HHH
Confidence 999999999999999999999999999999 99999999999997 999999999999999999999999999943 799
Q ss_pred cCCcccCCccccccCHHHHHHcCCCCCCeEEEcCChhhhhhhccCCCCCCcEEEEecccceeccccC-CCCCC-Ccc--e
Q 008692 247 LGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTVFGITD-DPEPR-LEG--H 322 (557)
Q Consensus 247 LP~i~~~~~~~G~l~~~~a~~~GL~~g~pV~~G~~D~~aa~~g~g~~~~g~~~~~~GTs~~~~~~~~-~~~~~-~~~--~ 322 (557)
||+|+++++++|+|++++|+++||++||||++|++|++|+++|+|++++|++++++|||+++.++++ +|..+ +.. .
T Consensus 208 LP~i~~~~~~~G~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~ 287 (511)
T 3hz6_A 208 MPRLLEPGEQVGGVSALAARQTGFVSGTPVLCGLGDAGAATLGVGVLDDEDAYLHLGTTGWLARLTQTDPVGDMPVGTIF 287 (511)
T ss_dssp SCEECCTTSEEEECCHHHHHHHCCCTTCEEECCEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEEEECCCCCSCCSSCCE
T ss_pred CCCCcCCCCcccccCHHHHHhhCCCCCCeEEEECchHHHHHHhCCCCCCCcEEEEecchhhheeecCCeecccCCCCceE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 88877 654 3
Q ss_pred eecCccCCCcEEEEEEeechhhHHHHHHHHhc--C-chHHHHHHHHhcCCCC---CCCeEeEeccCCCCCCCCCCceeee
Q 008692 323 VFPNPVDTKGYMIMLVYKNASLTREDVRNRCA--E-KSWDVFNKYLQQTPPL---NGGKMGFYYKEHEILPPLPVGFHRY 396 (557)
Q Consensus 323 ~~~~~~~~g~~~~~~~~~~~G~~~~W~~~~~~--~-~~~~~l~~~a~~~~~g---~~gl~~lP~l~Ger~P~~~~g~~~~ 396 (557)
.+++.+ +|.|+.+++++++|.+++|+++.++ . .+|++|++++++++|| ++|++|+|||+|||+|+
T Consensus 288 ~~~~~~-~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~~l~~~a~~~~~g~~~~~gl~~~P~~~Ger~P~-------- 358 (511)
T 3hz6_A 288 RLAGII-AGKTLQVAPVLNAGNILQWALTLVGHRPGEDCAEYFHMAAAEVQGVTVPDGLLFVPYLHAERCPV-------- 358 (511)
T ss_dssp EECSSS-TTEEEEEEEESSSHHHHHHHGGGGTCCTTSCSHHHHHHHHHHHTTCCCCTTCEEEEESSCBCSSS--------
T ss_pred EEEEec-CCceEEEeehhhHHHHHHHHHHHhcccccccHHHHHHHHHhCCCCCCCCCCEEEeCCCCCCCCCC--------
Confidence 477654 7887777999999999999999986 3 4799999999999999 99999999999999998
Q ss_pred eecccccccccccccccccCCChhhHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEecCCcchhhHHHHHHHHhCCce-E
Q 008692 397 ILENFEGETLDGVNEVEVKEFDPPSEVRALVEGQFLSMRGHAERFGLPSPPRRIIATGGASANQTILSCLASIYGCDI-Y 475 (557)
Q Consensus 397 ~~~~~~~g~~~Gl~~~~~~~~~~~~l~rAvlEgia~~~r~~~~~l~~~~~~~~i~~~GGga~s~~w~Qi~Advlg~pv-~ 475 (557)
|++++||+|+|++.. |+++||+||++|||||.+|++++.|++|. +++|+++||++||++|+||+||++|+|| +
T Consensus 359 -~d~~arg~~~Gl~~~----~~~~~l~RAvlEgia~~~~~~~~~l~~g~-~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~ 432 (511)
T 3hz6_A 359 -ELPAPRGALLGVTGA----TTRAQILLAVLEGAALSLRWCAELLGMEK-VGLLKVVGGGARSEAWLRMIADNLNVSLLV 432 (511)
T ss_dssp -CBSSCEEEEECCCTT----CCHHHHHHHHHHHHHHHHHHHHHHHTGGG-CCEEEEESGGGGCHHHHHHHHHHHTCEEEE
T ss_pred -CCCccceEEEcCCCC----CCHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeCchhcCHHHHHHHHHHHCCeeEE
Confidence 899999999999976 79999999999999999999999997655 8999999999999999999999999999 9
Q ss_pred EecCCCchhHHHHHHHHhccccccCCCCCCHHHHHhhhc---ccccceeecccccCchhhHHHHHHHHHHHHHHHHHHHH
Q 008692 476 TVQRPDSASLGAALRAAHGYLCSKKGSFVPISNMYKDKL---EKTSLSCKLAVTAGDQQLVSKYAVMMKKRLEIENRLVE 552 (557)
Q Consensus 476 ~~~~~e~~alGAA~lA~~a~~~~~~G~~~~~~~a~~~~~---~~~~~~~~P~~~~~~~~~~~~Y~~~y~~y~~l~~~l~~ 552 (557)
++...|++|+|||++|+++ .|.|+|++++.++ + .+..++|+|++++ ++.|+++|++|+++|+++++
T Consensus 433 ~~~~~e~~alGaA~lA~~a-----~G~~~~~~~~~~~-~~~~~~~~~~~~P~~~~-----~~~y~~~y~~~~~~~~~l~~ 501 (511)
T 3hz6_A 433 KPDAHLHPLRGLAALAAVE-----LEWSHSIQDFLRE-ADLREPASNILHPQPCD-----EGRRRRKFERFKQCVETLGR 501 (511)
T ss_dssp CCCGGGHHHHHHHHHHHHH-----TTSCSCHHHHHHH-HHTC---CCCBCCCCCC-----HHHHHHHHHHHHHHHHHHTC
T ss_pred ecCCCCchHHHHHHHHHHH-----hCCcCCHHHHHHH-hhccCCCCeEECcCHHH-----HHHHHHHHHHHHHHHHHHhh
Confidence 9889999999999999999 9999999877765 5 5677899999999 99999999999999999875
Q ss_pred H
Q 008692 553 K 553 (557)
Q Consensus 553 ~ 553 (557)
+
T Consensus 502 ~ 502 (511)
T 3hz6_A 502 L 502 (511)
T ss_dssp -
T ss_pred h
Confidence 4
No 4
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=100.00 E-value=2.9e-100 Score=838.76 Aligned_cols=518 Identities=47% Similarity=0.784 Sum_probs=464.2
Q ss_pred CcEEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCC-CceeeCCCCCCCccCChh-HHHHHHHHHHHHHhhc-
Q 008692 9 DSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTK-DGVYRDPSNNGRIVSPTL-MWIEALDLMLQKLSKS- 85 (557)
Q Consensus 9 ~~~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~-~~~eqd~~~~~~~~~~~~-~~~~a~~~~~~~l~~~- 85 (557)
++|+||||+||||+|++|||.+|+++++++++|+..+|+++++ +++|+| + |+.||||+ .||++++.+++.+.+.
T Consensus 9 ~~~~lgID~GTts~Ka~l~d~~G~vv~~~~~~~~~~~p~~~~~~g~~e~~-~--g~~eqdp~~~w~~~~~~~~~~l~~~~ 85 (538)
T 4bc3_A 9 RRCCLGWDFSTQQVKVVAVDAELNVFYEESVHFDRDLPEFGTQGGVHVHK-D--GLTVTSPVLMWVQALDIILEKMKASG 85 (538)
T ss_dssp CCEEEEEEECSSEEEEEEEETTCCEEEEEEEEHHHHSGGGCCBTTBEECT-T--SSCEEEEHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEEEEcCcCEEEEEECCCCCEEEEEEEecCCcCCcccCCCCeeecC-C--CccccCcHHHHHHHHHHHHHHHHHcC
Confidence 4699999999999999999999999999999999888874332 346654 2 68888886 6889988888888665
Q ss_pred CCCCCeeEEEEeccccceEEEcCCCccccccCCCCCCcccccccccCCCCCccccCCCcHHHHHHHHHHhCChHHHHHHh
Q 008692 86 LDLSKVTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLT 165 (557)
Q Consensus 86 ~~~~~I~aIgis~~~~~~v~vD~~g~pl~~~~d~~~pl~~~l~~~~~l~~~i~w~D~Ra~~~~~~l~~~~~~~~~~~~~t 165 (557)
+++.+|++||||+|||++|+||++|+..+.++|++.||+++|.+.+.|+|+|+|+|+|+.++++++.+.+++.++++++|
T Consensus 86 ~~~~~I~aIgis~q~~~~v~~D~~g~~~l~~l~~~~~l~~~~~~~~pl~~ai~W~D~R~~~~~~~l~~~~~~~~~~~~~t 165 (538)
T 4bc3_A 86 FDFSQVLALSGAGQQHGSIYWKAGAQQALTSLSPDLRLHQQLQDCFSISDCPVWMDSSTTAQCRQLEAAVGGAQALSCLT 165 (538)
T ss_dssp CCGGGEEEEEEEECSSCEEEEETTHHHHHHTCCTTSCHHHHHTTCBSCSEEECTTCCCCHHHHHHHHHHHTSHHHHHHHH
T ss_pred CChHHeEEEEecccceeEEEECCCccccccccccccchhhhccccccccCCcccccCcHHHHHHHHHHhhCcHHHHHHHH
Confidence 56789999999999999999999987445778888888877776666899999999999999999999876568899999
Q ss_pred CCCCCCCChHHHHHHHhhhCChhhhcccceeechhhHHHHHhCCcccccccccccccccccCCCCCcHHHHHHcCCchhh
Q 008692 166 GSRGYERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETDAAGMNLMDIRQRVWSKIVLEATAPSLEE 245 (557)
Q Consensus 166 G~~~~~~~~~~kl~Wl~~~~pe~~~~~~~~l~~~dyl~~~LTG~~~~~d~s~As~t~l~d~~~~~W~~~ll~~~g~~~~~ 245 (557)
|+++++.|+++||+|+++|+||+|+++++|++++|||.|+|||+.+.+|+|+||+|+|||+++++|++++|+.+|++..+
T Consensus 166 G~~~~~~~~~~kl~wl~~~~Pe~~~~~~~~~~~~d~l~~~LTG~~~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~ 245 (538)
T 4bc3_A 166 GSRAYERFTGNQIAKIYQQNPEAYSHTERISLVSSFAASLFLGSYSPIDYSDGSGMNLLQIQDKVWSQACLGACAPHLEE 245 (538)
T ss_dssp SSCCCTTSHHHHHHHHHHHCHHHHHTEEEEEEHHHHHHHHHHTSCCCCBHHHHTTSSCEETTTTEECHHHHHHHCTTHHH
T ss_pred CCCCccccHHHHHHHHHHcCHHHHHHhheEEcHHHHHHHHHhCCCcccccchhhcccccccccCCCCHHHHHHhCccHHH
Confidence 99999999999999999999999999999999999999999998744899999999999999999999999999943247
Q ss_pred hcCCcccCCccccccCHHHHHHcCCCCCCeEEEcCChhhhhhhccCCCCCCcEEEEecccceeccccCCCCCCCcceeec
Q 008692 246 KLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTVFGITDDPEPRLEGHVFP 325 (557)
Q Consensus 246 ~LP~i~~~~~~~G~l~~~~a~~~GL~~g~pV~~G~~D~~aa~~g~g~~~~g~~~~~~GTs~~~~~~~~~~~~~~~~~~~~ 325 (557)
+||+|+++++++|+|++++|+++||++||||++|++|++|+++|++ +++|++++++|||+++.+++++|..++.+..++
T Consensus 246 ~LP~i~~~~~~~G~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~~g~~-~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~ 324 (538)
T 4bc3_A 246 KLSPPVPSCSVVGAISSYYVQRYGFPPGCKVVAFTGDNPASLAGMR-LEEGDIAVSLGTSDTLFLWLQEPMPALEGHIFC 324 (538)
T ss_dssp HHCCCBCSSCEEEECCHHHHHHHCCCTTCEEECCEEHHHHHHHHTT-CCTTCEEEEESSSEEEEEEESSCCCCSSSEEEE
T ss_pred HCCCcccccccccccCHHHHHHhCCCCCCeEEEecccHHhhhhccc-cCCCcEEEEeccchheEEecCCCCCCCCcceEE
Confidence 9999999999999999999999999999999999999999999995 799999999999999999999988877777778
Q ss_pred CccCCCcEEEEEEeechhhHHHHHHHHhcCchHHHHHHHHhcCCCCCCCeEeEeccCCCCCCCCCCceeeeeeccccccc
Q 008692 326 NPVDTKGYMIMLVYKNASLTREDVRNRCAEKSWDVFNKYLQQTPPLNGGKMGFYYKEHEILPPLPVGFHRYILENFEGET 405 (557)
Q Consensus 326 ~~~~~g~~~~~~~~~~~G~~~~W~~~~~~~~~~~~l~~~a~~~~~g~~gl~~lP~l~Ger~P~~~~g~~~~~~~~~~~g~ 405 (557)
+.+.++.|+.+++++++|..++|+++.++..+|++|++++++++||++|++|+|||.|||+|+ ++|.|. |++..+|
T Consensus 325 ~~~~~~~~~~~~~~~~gg~~~~w~~~~~~~~~~~~l~~~a~~~~~g~~gl~~lp~~~Ger~P~-~~G~~~--~~~~~~g- 400 (538)
T 4bc3_A 325 NPVDSQHYMALLCFKNGSLMREKIRNESVSRSWSDFSKALQSTEMGNGGNLGFYFDVMEITPE-IIGRHR--FNTENHK- 400 (538)
T ss_dssp ETTEEEEEEEEEEESSSHHHHHHHHHHHSTTCHHHHHHHHHTSCTTGGGCEEEEESSCCSSSC-CCEEEE--ECTTSCE-
T ss_pred eecCCCCEEEeehhhccchHHHHHHHHhcCCCHHHHHHHHhcCCCCCCCeEEeecCCCCcCCC-CCceee--ecccccc-
Confidence 765456799999999999999999999876789999999999999999999999999999997 677663 4554443
Q ss_pred ccccccccccCCChhhHHHHHHHHHHHHHHHHHHHcCC-CCCCCEEEEecCCcchhhHHHHHHHHhCCceEEecCCCchh
Q 008692 406 LDGVNEVEVKEFDPPSEVRALVEGQFLSMRGHAERFGL-PSPPRRIIATGGASANQTILSCLASIYGCDIYTVQRPDSAS 484 (557)
Q Consensus 406 ~~Gl~~~~~~~~~~~~l~rAvlEgia~~~r~~~~~l~~-~~~~~~i~~~GGga~s~~w~Qi~Advlg~pv~~~~~~e~~a 484 (557)
++ +|+++||+||++|||||++|++++.|+. +.++++|+++||++||++|+||+|||||+||+++...|++|
T Consensus 401 ---~~-----~~~~~~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~e~~a 472 (538)
T 4bc3_A 401 ---VA-----AFPGDVEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVFDAPVYVIDTANSAC 472 (538)
T ss_dssp ---ES-----CCCHHHHHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHHTSCEEECCCTTHHH
T ss_pred ---cc-----CCCHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHhCCceEecCCCCchH
Confidence 32 1589999999999999999999999986 67889999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccccccCCC--CCCHHHHHhhhcccccceeecccccCchhhHHHHHHHHHHHHHHHHHHHHH
Q 008692 485 LGAALRAAHGYLCSKKGS--FVPISNMYKDKLEKTSLSCKLAVTAGDQQLVSKYAVMMKKRLEIENRLVEK 553 (557)
Q Consensus 485 lGAA~lA~~a~~~~~~G~--~~~~~~a~~~~~~~~~~~~~P~~~~~~~~~~~~Y~~~y~~y~~l~~~l~~~ 553 (557)
+|||++|+++ .|. |+|++++.+. +.+..++|+|++++ ++.|+++|++|+++|+++...
T Consensus 473 lGaA~lA~~a-----~G~~~~~~~~ea~~~-~~~~~~~~~P~~~~-----~~~Y~~~y~~y~~l~~~~~~~ 532 (538)
T 4bc3_A 473 VGSAYRAFHG-----LAGGTDVPFSEVVKL-APNPRLAATPSPGA-----SQVYEALLPQYAKLEQRILSQ 532 (538)
T ss_dssp HHHHHHHHHH-----HHTGGGSCHHHHHTT-SCCCEEEECCCTTH-----HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-----hCcccCCCHHHHHHh-hcCCCeeECCCHHH-----HHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999 898 8999998875 55677899999988 999999999999999998765
No 5
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=100.00 E-value=3.8e-97 Score=819.74 Aligned_cols=494 Identities=16% Similarity=0.194 Sum_probs=435.2
Q ss_pred CcEEEEEEccCCceEEEEEcC-CCCEEEEEeeecc-----CCCCC------CCCCCceeeCCCCCCCccCChhHHHHHHH
Q 008692 9 DSLFLGFDSSTQSLKATVLDS-NLNIVASEQLQFD-----SELPH------YKTKDGVYRDPSNNGRIVSPTLMWIEALD 76 (557)
Q Consensus 9 ~~~~lgIDiGTts~Ka~l~d~-~G~~v~~~~~~~~-----~~~p~------~g~~~~~eqd~~~~~~~~~~~~~~~~a~~ 76 (557)
++|+||||+||||+|++|||. +|+++++.+++|+ ..+|+ ++| +||||+ +||++++
T Consensus 4 ~~~~lgIDiGTts~Ka~l~d~~~G~i~~~~~~~~~~~~~~~~~p~~~~~~~~g~---~eqdp~----------~~~~~~~ 70 (572)
T 3jvp_A 4 TKYTIGVDYGTESGRAVLIDLSNGQELADHVTPYRHGVIDQYLPNTNIKLGHEW---ALQHPL----------DYVEVLT 70 (572)
T ss_dssp -CEEEEEEECSSEEEEEEEETTTCCEEEEEEEECTTCCBSSBSTTSCCBCCTTC---CEECHH----------HHHHHHT
T ss_pred CCEEEEEecCCcceEEEEEECCCCeEEEEEEeccCCccccccCCccccCCCCCc---EEECHH----------HHHHHHH
Confidence 469999999999999999998 9999999999998 55565 443 666666 9999999
Q ss_pred HHHHHHhhc--CCCCCeeEEEEeccccceEEEcCCCccccccCC-CCCCcccccccccCCCCCccccCCCcHHHHHHHHH
Q 008692 77 LMLQKLSKS--LDLSKVTAVSGSGQQHGSVYWKKGSATILSSLD-PKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEK 153 (557)
Q Consensus 77 ~~~~~l~~~--~~~~~I~aIgis~~~~~~v~vD~~g~pl~~~~d-~~~pl~~~l~~~~~l~~~i~w~D~Ra~~~~~~l~~ 153 (557)
++++++.+. .++.+|.+||||+||+++|+||++|+||....+ .+.| ..++|+|+|+|+.++++++.+
T Consensus 71 ~~i~~~l~~~~~~~~~I~~Igis~q~~~~v~~D~~G~pl~~~~~~~~~p----------~~~ai~W~D~R~~~~~~~l~~ 140 (572)
T 3jvp_A 71 TSVPAVMKESGVDADDVIGIGVDFTACTMLPVDEEGQPLCLLAQYKDNP----------HSWVKLWKHHAAQDKANAINE 140 (572)
T ss_dssp THHHHHHHC---CCSCEEEEEEEECSSCEEEECTTSCBGGGSSSTTSSG----------GGSEECTTCCTTHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhHEEEEEEecCCCcEEEECCCCCCCccCccccccc----------cccceecCccchHHHHHHHHH
Confidence 999987764 567899999999999999999999998521111 0011 124899999999999999988
Q ss_pred HhCC-hHHHHHHhCCCCCCCChHHHHHHHhhhCChhhhcccceeechhhHHHHHhCCcccccccccccccccccCCCCC-
Q 008692 154 AVGG-ALELSKLTGSRGYERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETDAAGMNLMDIRQRVW- 231 (557)
Q Consensus 154 ~~~~-~~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~~~~~l~~~dyl~~~LTG~~~~~d~s~As~t~l~d~~~~~W- 231 (557)
.+++ .++++++||+++++.|+++||+|+++|+||+|+|+++|++++|||.|+|||+.+ +|+|+||+|+||| ++++|
T Consensus 141 ~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe~~~~~~~~l~~~dyl~~~LTG~~~-~d~s~As~t~l~d-~~~~W~ 218 (572)
T 3jvp_A 141 MAEKRGEAFLPRYGGKISSEWMIAKVWQILDEAEDVYNRTDQFLEATDWIVSQMTGKIV-KNSCTAGYKAIWH-KREGYP 218 (572)
T ss_dssp HHHHHTCTTGGGGTTCCCSSSHHHHHHHHHHHHHHHHHHCSEEEEHHHHHHHHHHSSCC-EEHHHHHHHSCCB-TTTBSC
T ss_pred hccccHHHHHHHhCCCCCchhHHHHHHHHHHhCHHHHHHhheEecHHHHHHHHhcCCce-eehhhccccceeC-CCCCcC
Confidence 6421 256889999999999999999999999999999999999999999999999998 9999999999999 99999
Q ss_pred cHHHHHHcCCc---h-hhhc-CCcccCCccccccCHHHHHHcCCCCCCeEEEcCChhhhhhhccCCCCCCcEEEEecccc
Q 008692 232 SKIVLEATAPS---L-EEKL-GKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSD 306 (557)
Q Consensus 232 ~~~ll~~~g~~---~-~~~L-P~i~~~~~~~G~l~~~~a~~~GL~~g~pV~~G~~D~~aa~~g~g~~~~g~~~~~~GTs~ 306 (557)
|+++|+.+|+. + +++| |+|+++++++|+|++++|+++||++|+||++|++|++|+++|+|++++|++++++|||+
T Consensus 219 ~~ell~~~g~~l~~i~~~~L~p~i~~~~~~~G~l~~~~A~~~GL~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~~~GTs~ 298 (572)
T 3jvp_A 219 SNEFFKALDPRLEHLTTTKLRGDIVPLGERAGGLLPEMAEKMGLNPGIAVAVGNVDAHAAVPAVGVTTPGKLVMAMGTSI 298 (572)
T ss_dssp CHHHHHTTCGGGTTSTTTTTCSCEECTTSEEEECCHHHHHHHTSCTTCEEECCEETTTTHHHHTTCCSSEEEEEEESSSE
T ss_pred CHHHHHHhCcccccCCHhHCCCccCCcCccccccCHHHHHHhCCCCCCeEEEeCchHHHHHhhCCCCCCCcEEEEecchh
Confidence 99999999831 0 4566 89999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccccCCCCCCCcc-eeecCccCCCcEEEEEEeechhhHHHHHHHHhcC------------chHHHHHHHHhcCCCCCC
Q 008692 307 TVFGITDDPEPRLEG-HVFPNPVDTKGYMIMLVYKNASLTREDVRNRCAE------------KSWDVFNKYLQQTPPLNG 373 (557)
Q Consensus 307 ~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~G~~~~W~~~~~~~------------~~~~~l~~~a~~~~~g~~ 373 (557)
++.++++++...+.. ..+.....+|.|.++++++++|.+++||++.+.. +.|++|++++++++||++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~~~~g~~~~~~l~~~a~~~~~g~~ 378 (572)
T 3jvp_A 299 CHMLLGEKEQEVEGMCGVVEDGIIPGYLGYEAGQSAVGDIFAWFVKHGVSAATFDEAQEKGVNVHALLEEKASQLRPGES 378 (572)
T ss_dssp EEEEEESSCCCCTTCSEEEETSSSTTSEEEEEEESCSHHHHHHHHHHTSBHHHHHHHHHTTBCHHHHHHHHHTSSCTTSS
T ss_pred heeeecCCCccCCCceeeccCccCCCcEEEeehhhhHHHHHHHHHHhccchhhHHHHHhcCCCHHHHHHHHHHhCCCCCC
Confidence 988888766544322 1122223589999999999999999999998842 348899999999999999
Q ss_pred CeEeEeccCCCCCCCCCCceeeeeecccccccccccccccccCCChhhHHHHHHHHHHHHHHHHHHHcCC-CCCCCEEEE
Q 008692 374 GKMGFYYKEHEILPPLPVGFHRYILENFEGETLDGVNEVEVKEFDPPSEVRALVEGQFLSMRGHAERFGL-PSPPRRIIA 452 (557)
Q Consensus 374 gl~~lP~l~Ger~P~~~~g~~~~~~~~~~~g~~~Gl~~~~~~~~~~~~l~rAvlEgia~~~r~~~~~l~~-~~~~~~i~~ 452 (557)
|++|+|||.|||+|+ +++++||+|+|++.. |+++||+||++|||||++|++++.|++ |.++++|++
T Consensus 379 gl~~lP~~~Ger~P~---------~d~~arg~~~Gl~~~----~t~~~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~ 445 (572)
T 3jvp_A 379 GLLALDWWNGNRSIL---------VDTELSGMLLGYTLQ----TKPEEIYRALLEATAFGTRAIVDAFHGRGVEVHELYA 445 (572)
T ss_dssp CCEEECCTTCCCTTT---------CCSSCCEEEEEECTT----CCHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEE
T ss_pred CeEeCCccCCCCCCC---------CCCCcCEEEECCCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCEEEE
Confidence 999999999999998 899999999999987 799999999999999999999999986 788999999
Q ss_pred ecCCc-chhhHHHHHHHHhCCceEEecCCCchhHHHHHHHHhccccccCC----CCCCHHHHHhhhccc-ccceeecccc
Q 008692 453 TGGAS-ANQTILSCLASIYGCDIYTVQRPDSASLGAALRAAHGYLCSKKG----SFVPISNMYKDKLEK-TSLSCKLAVT 526 (557)
Q Consensus 453 ~GGga-~s~~w~Qi~Advlg~pv~~~~~~e~~alGAA~lA~~a~~~~~~G----~~~~~~~a~~~~~~~-~~~~~~P~~~ 526 (557)
+||++ ||++|+||+|||||+||.++...|++|+|||++|+++ .| .|+|++++.+. +.+ ..++|+|+++
T Consensus 446 ~GGga~ks~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA~~a-----~G~~~~~~~~~~e~~~~-~~~~~~~~~~P~~~ 519 (572)
T 3jvp_A 446 CGGLPQKNHLLMQIFADVTNREIKVAASKQTPALGAAMFASVA-----AGSEVGGYDSIEEAAKK-MGRVKDETFKPIPE 519 (572)
T ss_dssp ESSHHHHCHHHHHHHHHHHTSCEEEBCCSSHHHHHHHHHHHHH-----HCSSSSSCSCHHHHHHH-HCCBCSCCBCCCHH
T ss_pred EcCchhhCHHHHHHHHHHHCCeeEecCCCccHHHHHHHHHHHh-----cCCCccccCCHHHHHHH-hhccCCeEEeeCHH
Confidence 99999 9999999999999999999999999999999999999 89 99999998875 434 3578999998
Q ss_pred cCchhhHHHHHHHHHHHHHHHHHHH
Q 008692 527 AGDQQLVSKYAVMMKKRLEIENRLV 551 (557)
Q Consensus 527 ~~~~~~~~~Y~~~y~~y~~l~~~l~ 551 (557)
+ ++.|+++|++|+++|++++
T Consensus 520 ~-----~~~Y~~~y~~y~~l~~~l~ 539 (572)
T 3jvp_A 520 H-----VAIYEKLYQEYVTLHDYFG 539 (572)
T ss_dssp H-----HHHHHHHHHHHHHHHHHHH
T ss_pred H-----HHHHHHHHHHHHHHHHHHh
Confidence 8 9999999999999999985
No 6
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=100.00 E-value=2.8e-96 Score=798.52 Aligned_cols=480 Identities=20% Similarity=0.285 Sum_probs=435.2
Q ss_pred EEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhcCCCCC
Q 008692 11 LFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDLSK 90 (557)
Q Consensus 11 ~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~~~~~~ 90 (557)
++||||+|||++|++|+|.+|+++++.+.+++..+|++|| +||||+ +||++++++++++.+.....+
T Consensus 1 ~~lgiDiGtt~~k~~l~d~~g~~l~~~~~~~~~~~p~~g~---~e~d~~----------~~~~~i~~~i~~~~~~~~~~~ 67 (484)
T 2itm_A 1 MYIGIDLGTSGVKVILLNEQGEVVAAQTEKLTVSRPHPLW---SEQDPE----------QWWQATDRAMKALGDQHSLQD 67 (484)
T ss_dssp CEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTC---CEECHH----------HHHHHHHHHHHHHHHHSCCTT
T ss_pred CEEEEEecCcccEEEEECCCCCEEEEEEeccccccCCCCC---EeECHH----------HHHHHHHHHHHHHHHhCCccc
Confidence 4799999999999999999999999999999988888875 888888 999999999998865433568
Q ss_pred eeEEEEeccccceEEEcCCCccccccCCCCCCcccccccccCCCCCccccCCCcHHHHHHHHHHhCChHHHHHHhCCCCC
Q 008692 91 VTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTGSRGY 170 (557)
Q Consensus 91 I~aIgis~~~~~~v~vD~~g~pl~~~~d~~~pl~~~l~~~~~l~~~i~w~D~Ra~~~~~~l~~~~~~~~~~~~~tG~~~~ 170 (557)
|.+||||+|+|++|+||++|+| ++|+|+|+|.|+.++++++.+..+ .++++||++++
T Consensus 68 i~~Igis~~~~~~v~~D~~G~~--------------------l~~~i~w~D~R~~~~~~~l~~~~~---~~~~~tG~~~~ 124 (484)
T 2itm_A 68 VKALGIAGQMHGATLLDAQQRV--------------------LRPAILWNDGRCAQECTLLEARVP---QSRVITGNLMM 124 (484)
T ss_dssp CCEEEEEECSSCBEEECTTCCB--------------------CSCEECTTCCTTHHHHHHHHHHCT---THHHHHSSCCC
T ss_pred eEEEEEcCCcCcEEEECCCcCC--------------------CcccceecccCcHHHHHHHHHhHH---HHHHHhCCCCC
Confidence 9999999999999999999998 479999999999999999988753 35788999999
Q ss_pred CCChHHHHHHHhhhCChhhhcccceeechhhHHHHHhCCcccccccccccccccccCCCCCcHHHHHHcCCchhhhcCCc
Q 008692 171 ERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETDAAGMNLMDIRQRVWSKIVLEATAPSLEEKLGKL 250 (557)
Q Consensus 171 ~~~~~~kl~Wl~~~~pe~~~~~~~~l~~~dyl~~~LTG~~~~~d~s~As~t~l~d~~~~~W~~~ll~~~g~~~~~~LP~i 250 (557)
+.++++||+|+++|+||+|+++++++.++|||.|+|||+++ +|+|+||+|++||+++++|++++|+.+|.+ .++||+|
T Consensus 125 ~~~~~~kl~wl~~~~P~~~~~~~~~l~~~d~l~~~LTG~~~-td~s~As~t~l~d~~~~~W~~~ll~~~gi~-~~~lp~i 202 (484)
T 2itm_A 125 PGFTAPKLLWVQRHEPEIFRQIDKVLLPKDYLRLRMTGEFA-SDMSDAAGTMWLDVAKRDWSDVMLQACDLS-RDQMPAL 202 (484)
T ss_dssp TTSHHHHHHHHHHHCHHHHTTCCEEECHHHHHHHHHHSCCE-EEHHHHHTTTCEETTTTEECHHHHHTTTCC-GGGSCEE
T ss_pred cccHHHHHHHHHHhChHHHHHHhheeCcHHHHHHHHhCCce-eeHHHhhccccccCCCCCcCHHHHHHcCCC-HHHCCCc
Confidence 99999999999999999999999999999999999999997 999999999999999999999999999933 6899999
Q ss_pred ccCCccccccCHHHHHHcCCCCCCeEEEcCChhhhhhhccCCCCCCcEEEEecccceeccccCCCCCCC--cceeecCcc
Q 008692 251 APAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTVFGITDDPEPRL--EGHVFPNPV 328 (557)
Q Consensus 251 ~~~~~~~G~l~~~~a~~~GL~~g~pV~~G~~D~~aa~~g~g~~~~g~~~~~~GTs~~~~~~~~~~~~~~--~~~~~~~~~ 328 (557)
+++++++|+|++++|+++||+ ||||++|+||++|+++|+|+.++|++++++|||+++.+++++|..++ ....+++.
T Consensus 203 ~~~~~~~G~~~~~~a~~~Gl~-g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~- 280 (484)
T 2itm_A 203 YEGSEITGALLPEVAKAWGMA-TVPVVAGGGDNAAGAVGVGMVDANQAMLSLGTSGVYFAVSEGFLSKPESAVHSFCHA- 280 (484)
T ss_dssp ECTTSEEEECCHHHHHHHTSC-CCEEECCEEHHHHHHHHHTCCSTTCEEEEESSSEEEEEECSSCCCCCSSSCEEEECS-
T ss_pred cCCcceeeccCHHHHHHhCCC-CCeEEEEchHHHHHHHhCCCCCCCcEEEEccchheeEEecCCCccCcccceEEeecc-
Confidence 999999999999999999999 99999999999999999999999999999999999999888776554 33456654
Q ss_pred CCCcEEEEEEeechhhHHHHHHHHhcCchHHHHHHHHhcCCCCCCCeEeEeccCCCCCCCCCCceeeeeecccccccccc
Q 008692 329 DTKGYMIMLVYKNASLTREDVRNRCAEKSWDVFNKYLQQTPPLNGGKMGFYYKEHEILPPLPVGFHRYILENFEGETLDG 408 (557)
Q Consensus 329 ~~g~~~~~~~~~~~G~~~~W~~~~~~~~~~~~l~~~a~~~~~g~~gl~~lP~l~Ger~P~~~~g~~~~~~~~~~~g~~~G 408 (557)
.+|.|+++++++++|.+++|+++.++..+|+++++++++.+++++|++|+|||.|+|+|+ |++.+||+|+|
T Consensus 281 ~~g~~~~~~~~~~~G~~~~W~~~~~~~~~~~~~~~~a~~~~~~~~gl~~lP~~~G~r~P~---------~~~~a~g~~~G 351 (484)
T 2itm_A 281 LPQRWHLMSVMLSAASCLDWAAKLTGLSNVPALIAAAQQADESAEPVWFLPYLSGERTPH---------NNPQAKGVFFG 351 (484)
T ss_dssp STTCEEEEEEECCHHHHHHHHHHHTTCCSHHHHHHHGGGCCTTSCCCEEEEEEC-----------------CCEEEEEEE
T ss_pred cCCeeeeeehhhhHHHHHHHHHHhcCcccHHHHHHHHhcCCCCCCCeEEeCCCCCCCCCC---------CCCCCceEEEc
Confidence 478999999999999999999999866679999999999999999999999999999998 89999999999
Q ss_pred cccccccCCChhhHHHHHHHHHHHHHHHHHHHcCC-CCCCCEEEEecCCcchhhHHHHHHHHhCCceEEecCCCc-hhHH
Q 008692 409 VNEVEVKEFDPPSEVRALVEGQFLSMRGHAERFGL-PSPPRRIIATGGASANQTILSCLASIYGCDIYTVQRPDS-ASLG 486 (557)
Q Consensus 409 l~~~~~~~~~~~~l~rAvlEgia~~~r~~~~~l~~-~~~~~~i~~~GGga~s~~w~Qi~Advlg~pv~~~~~~e~-~alG 486 (557)
++.. |+++||+||++||++|++|++++.|++ +.++++|+++||++||++|+||+||++|+||.+++..|. +|+|
T Consensus 352 l~~~----~~~~~~~rAvlEgia~~~~~~~~~l~~~g~~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~~e~~~alG 427 (484)
T 2itm_A 352 LTHQ----HGPNELARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALG 427 (484)
T ss_dssp EETT----CCHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCSCEEEESGGGCCHHHHHHHHHHHCCCEEEESCTTSCHHHH
T ss_pred CCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEeccccCHHHHHHHHHHhCCeEEeCCCCCcccHHH
Confidence 9976 799999999999999999999999976 778899999999999999999999999999999998885 8999
Q ss_pred HHHHHHhccccccCCCCCCHHHHHhhhcccccceeecccccCchhhHHHHHHHHHHHHHHHHHHHHHhc
Q 008692 487 AALRAAHGYLCSKKGSFVPISNMYKDKLEKTSLSCKLAVTAGDQQLVSKYAVMMKKRLEIENRLVEKLG 555 (557)
Q Consensus 487 AA~lA~~a~~~~~~G~~~~~~~a~~~~~~~~~~~~~P~~~~~~~~~~~~Y~~~y~~y~~l~~~l~~~~~ 555 (557)
||++|+++ .|.++|++++.+. + ...++|+|++++ ++.|+++|++|+++|++++++|+
T Consensus 428 AA~lA~~~-----~g~~~~~~~~~~~-~-~~~~~~~P~~~~-----~~~y~~~y~~~~~~~~~~~~~~~ 484 (484)
T 2itm_A 428 AARLAQIA-----ANPEKSLIELLPQ-L-PLEQSHLPDAQR-----YAAYQPRRETFRRLYQQLLPLMA 484 (484)
T ss_dssp HHHHHHHH-----HCTTSCHHHHSCC-C-CEEEEECCCHHH-----HHHHHHHHHHHHHHHHHHGGGGC
T ss_pred HHHHHHHH-----cCCcCCHHHHHHh-c-CCCeEECCCHHH-----HHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999999 9999999998764 3 466789999988 89999999999999999988764
No 7
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=100.00 E-value=6.9e-95 Score=790.89 Aligned_cols=476 Identities=14% Similarity=0.150 Sum_probs=432.6
Q ss_pred CcEEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhc--C
Q 008692 9 DSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS--L 86 (557)
Q Consensus 9 ~~~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~--~ 86 (557)
++|+||||+|||++|++|||.+|+++++.+++++..+|++|| +||||+ +||++++++++++.+. .
T Consensus 4 ~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~---~e~dp~----------~~~~~~~~~i~~~~~~~~~ 70 (506)
T 3h3n_X 4 KNYVMAIDQGTTSSRAIIFDRNGKKIGSSQKEFPQYFPKSGW---VEHNAN----------EIWNSVQSVIAGAFIESGI 70 (506)
T ss_dssp CCEEEEEEECSSEEEEEEEETTSCEEEEEEEECCCBCSSTTC---CEECHH----------HHHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEEEcCCCceEEEEECCCCCEEEEEEEecCccCCCCCc---EEECHH----------HHHHHHHHHHHHHHHHcCC
Confidence 569999999999999999999999999999999988888875 888888 9999999999988654 4
Q ss_pred CCCCeeEEEEeccccceEEEcCC-CccccccCCCCCCcccccccccCCCCCccccCCCcHHHHHHHHHHhCChHHHHHHh
Q 008692 87 DLSKVTAVSGSGQQHGSVYWKKG-SATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLT 165 (557)
Q Consensus 87 ~~~~I~aIgis~~~~~~v~vD~~-g~pl~~~~d~~~pl~~~l~~~~~l~~~i~w~D~Ra~~~~~~l~~~~~~~~~~~~~t 165 (557)
++.+|.+||||+|+|++|+||++ |+| ++|+|+|+|+|+.++++++.+.. ..++++++|
T Consensus 71 ~~~~I~~Igis~~~~~~v~~D~~~G~~--------------------l~~~i~w~D~R~~~~~~~l~~~~-~~~~~~~~t 129 (506)
T 3h3n_X 71 RPEAIAGIGITNQRETTVVWDKTTGQP--------------------IANAIVWQSRQSSPIADQLKVDG-HTEMIHEKT 129 (506)
T ss_dssp CGGGEEEEEEEECSSCBEEEETTTCCB--------------------SSCEECTTCCTTHHHHHHHHHTT-CHHHHHHHH
T ss_pred ChhheEEEEeeCCcccEEEEeCCCCeE--------------------CCCceEecCcchHHHHHHHHhcc-CHHHHHHHh
Confidence 56789999999999999999998 998 48999999999999999999874 468899999
Q ss_pred CCCCCCCChHHHHHHHhhhCChhhhcccc----eeechhhHHHHHhC--CcccccccccccccccccCCCCCcHHHHHHc
Q 008692 166 GSRGYERFTGPQIRKLFQTQPGVYDDTER----ISVVSSFMASLLIG--AYACIDETDAAGMNLMDIRQRVWSKIVLEAT 239 (557)
Q Consensus 166 G~~~~~~~~~~kl~Wl~~~~pe~~~~~~~----~l~~~dyl~~~LTG--~~~~~d~s~As~t~l~d~~~~~W~~~ll~~~ 239 (557)
|+++++.++++||+|+++|+||+|+++++ |++++|||.|+||| +++ +|+|+||+|+|||+++++|++++|+.+
T Consensus 130 G~~~~~~~~~~kl~Wl~~~~pe~~~~~~~~~~~~~~~~dyl~~~LTG~~~~~-td~s~As~t~l~d~~~~~W~~~ll~~~ 208 (506)
T 3h3n_X 130 GLVIDAYFSATKVRWLLDNIEGAQEKADNGELLFGTIDSWLVWKLTDGQVHV-TDYSNASRTMLYNIHKLEWDQEILDLL 208 (506)
T ss_dssp SCCCCTTSHHHHHHHHHHHSTTHHHHHHTTCEEEECHHHHHHHHHTTTSCCE-EEHHHHHTTTSEETTTTEECHHHHHHT
T ss_pred CCCCCchhHHHHHHHHHHhCHHHHHHHhcCCeEEecHHHHHHHHhcCCceee-eEHHHhhhhhCeecCCCCcCHHHHHHc
Confidence 99999999999999999999999999987 77899999999999 566 999999999999999999999999999
Q ss_pred CCchhhhcCCcccCCccccccCHHHHHHcCCCCCCeEEEcCChhhhhhhccCCCCCCcEEEEecccceeccccC-CCCCC
Q 008692 240 APSLEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTVFGITD-DPEPR 318 (557)
Q Consensus 240 g~~~~~~LP~i~~~~~~~G~l~~~~a~~~GL~~g~pV~~G~~D~~aa~~g~g~~~~g~~~~~~GTs~~~~~~~~-~~~~~ 318 (557)
|.+ +++||+|+++++++|++++++ ++| +||||++|++|++|+++|+|++++|++++++|||+++.+.++ +|..+
T Consensus 209 gi~-~~~LP~i~~~~~~~G~~~~~~--~lg--~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~ 283 (506)
T 3h3n_X 209 NIP-SSMLPEVKSNSEVYGHTRSYR--FYG--SEVPIAGMAGDQQAALFGQMAFEKGMIKNTYGTGAFIVMNTGEEPQLS 283 (506)
T ss_dssp TCC-GGGCCEEECSEEEEEECCGGG--TTT--CCCEEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEEEETCCCSC
T ss_pred CcC-HHHCCceecCCCcceeeChHH--hcC--CCCeEEEECCcHHHHHHhCCCCCCCcEEEEecchheeeeecCCccccC
Confidence 933 799999999999999999987 466 899999999999999999999999999999999998877764 45444
Q ss_pred Ccc--eeecCccCCC--cEEEEEEeechhhHHHHHHHHhcC-chHHHHHHHHhcCCCCCCCeEeEeccCCCCCCCCCCce
Q 008692 319 LEG--HVFPNPVDTK--GYMIMLVYKNASLTREDVRNRCAE-KSWDVFNKYLQQTPPLNGGKMGFYYKEHEILPPLPVGF 393 (557)
Q Consensus 319 ~~~--~~~~~~~~~g--~~~~~~~~~~~G~~~~W~~~~~~~-~~~~~l~~~a~~~~~g~~gl~~lP~l~Ger~P~~~~g~ 393 (557)
+.+ ..++|.+ +| .|..+++++++|.+++|+++.++. .+|++++++++++|++ +|++|+|||+|||+|+
T Consensus 284 ~~~~~~~~~~~~-~g~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~~~-~gl~~~P~~~Ger~P~----- 356 (506)
T 3h3n_X 284 DNDLLTTIGYGI-NGKVYYALEGSIFVAGSAIQWLRDGLRMIETSPQSEELAAKAKGD-NEVYVVPAFTGLGAPY----- 356 (506)
T ss_dssp CTTSEEEEEEEE-TTEEEEEEEEEECCSSHHHHHHHHTSCCCSSTTHHHHHHTTCCSC-SCCEEECCTTCBCTTT-----
T ss_pred CCceEEEeeeec-CCCCEEEEecchhhHHHHHHHHHHHcCCCCcHHHHHHHHhcCCCC-CceEEeccccCCCCCc-----
Confidence 432 3455654 44 699999999999999999998864 5789999999988875 8999999999999998
Q ss_pred eeeeecccccccccccccccccCCChhhHHHHHHHHHHHHHHHHHHHcCC--CCCCCEEEEecCCcchhhHHHHHHHHhC
Q 008692 394 HRYILENFEGETLDGVNEVEVKEFDPPSEVRALVEGQFLSMRGHAERFGL--PSPPRRIIATGGASANQTILSCLASIYG 471 (557)
Q Consensus 394 ~~~~~~~~~~g~~~Gl~~~~~~~~~~~~l~rAvlEgia~~~r~~~~~l~~--~~~~~~i~~~GGga~s~~w~Qi~Advlg 471 (557)
|++.+||+|+|++.. |+++||+||++|||||.+|++++.|++ |.++++|+++||++||++|+||+||++|
T Consensus 357 ----~d~~arg~~~Gl~~~----~~~~~l~RAvlEgia~~~r~~~~~l~~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~g 428 (506)
T 3h3n_X 357 ----WDSEARGAVFGLTRG----TTKEDFVRATLQAVAYQSKDVIDTMKKDSGIDIPLLKVDGGAAKNDLLMQFQADILD 428 (506)
T ss_dssp ----CBTTCCCEEECCCTT----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCCCEEEEESGGGGCHHHHHHHHHHHT
T ss_pred ----cCCCCCEEEEccCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEecccccCHHHHHHHHHHhC
Confidence 899999999999987 799999999999999999999999974 7889999999999999999999999999
Q ss_pred CceEEecCCCchhHHHHHHHHhccccccCCCCCCHHHHHhhhcccccceeecccccCchhhHHHHHHHHHHHHHHHHHHH
Q 008692 472 CDIYTVQRPDSASLGAALRAAHGYLCSKKGSFVPISNMYKDKLEKTSLSCKLAVTAGDQQLVSKYAVMMKKRLEIENRLV 551 (557)
Q Consensus 472 ~pv~~~~~~e~~alGAA~lA~~a~~~~~~G~~~~~~~a~~~~~~~~~~~~~P~~~~~~~~~~~~Y~~~y~~y~~l~~~l~ 551 (557)
+||+++...|++|+|||++|+++ .|.|+|++++.+ +.+..++|+|+++. ..|+++|++|+++|++++
T Consensus 429 ~pV~~~~~~e~~alGaA~lA~~a-----~G~~~~~~~~~~--~~~~~~~~~P~~~~------~~~~~~y~~~~~~~~~~~ 495 (506)
T 3h3n_X 429 IDVQRAANLETTALGAAYLAGLA-----VGFWKDLDELKS--MAEEGQMFTPEMPA------EERDNLYEGWKQAVAATQ 495 (506)
T ss_dssp SEEEECSSSCHHHHHHHHHHHHH-----TTSSCSHHHHHT--TCCCCCEECCCSCH------HHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCcchhHHHHHHHHHH-----hCccCCHHHHHH--hcCCCeEECCCCCH------HHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999 999999999764 45778899999876 469999999999999987
Q ss_pred H
Q 008692 552 E 552 (557)
Q Consensus 552 ~ 552 (557)
.
T Consensus 496 ~ 496 (506)
T 3h3n_X 496 T 496 (506)
T ss_dssp H
T ss_pred h
Confidence 5
No 8
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=100.00 E-value=1.7e-95 Score=803.96 Aligned_cols=487 Identities=14% Similarity=0.162 Sum_probs=435.7
Q ss_pred CcEEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhc--C
Q 008692 9 DSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS--L 86 (557)
Q Consensus 9 ~~~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~--~ 86 (557)
++|+||||+|||++|++|||.+|+++++.+++|+..+|++|| +||||+ +||++++++++++.+. .
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~~G~il~~~~~~~~~~~p~~g~---~eqdp~----------~~~~~~~~~i~~~~~~~~~ 70 (554)
T 3l0q_A 4 ASYFIGVDVGTGSARAGVFDLQGRMVGQASREITMFKPKADF---VEQSSE----------NIWQAVCNAVRDAVNQADI 70 (554)
T ss_dssp CCEEEEEEECSSEEEEEEEETTSCEEEEEEEECCCEEEETTE---EEECHH----------HHHHHHHHHHHHHHHHHTC
T ss_pred CcEEEEEEECcccEEEEEECCCCCEEEEEEEecccccCCCCc---cccCHH----------HHHHHHHHHHHHHHHHcCC
Confidence 469999999999999999999999999999999988888765 899988 9999999999988764 5
Q ss_pred CCCCeeEEEEeccccceEEEcCCCccccccCCCC-CCcccccccccCCCCCccccCCCcHHHHHHHHHHhCChHHHHHHh
Q 008692 87 DLSKVTAVSGSGQQHGSVYWKKGSATILSSLDPK-KPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLT 165 (557)
Q Consensus 87 ~~~~I~aIgis~~~~~~v~vD~~g~pl~~~~d~~-~pl~~~l~~~~~l~~~i~w~D~Ra~~~~~~l~~~~~~~~~~~~~t 165 (557)
.+.+|.+||||+| +++|+||++|+||. ++++ .| .+|+|+|+|+|+.++++++.+. + ++++++|
T Consensus 71 ~~~~I~~Igis~~-~~~v~~D~~G~pl~--~~~~~~~----------~~~ai~W~D~Ra~~~~~~l~~~-~--~~~~~~t 134 (554)
T 3l0q_A 71 NPIQVKGLGFDAT-CSLVVLDKEGNPLT--VSPSGRN----------EQNVIVWMDHRAITQAERINAT-K--HPVLEFV 134 (554)
T ss_dssp CGGGEEEEEEEEC-SCEEEEETTSCBCC--CSTTCCT----------TCCEECTTCCTTHHHHHHHHHH-T--CGGGGGB
T ss_pred CHhHEEEEEEcCC-CceEEECCCCCEee--ccCCCCC----------CCCcEEecccchHHHHHHHHHh-H--HHHHHHh
Confidence 5678999999999 89999999999952 2222 23 2799999999999999999886 2 5689999
Q ss_pred CCCCCCCChHHHHHHHhhhCChhhhcccceeechhhHHHHHhCCcccccccccccccc--cccCCCCCcHHHHHHcC-Cc
Q 008692 166 GSRGYERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETDAAGMNL--MDIRQRVWSKIVLEATA-PS 242 (557)
Q Consensus 166 G~~~~~~~~~~kl~Wl~~~~pe~~~~~~~~l~~~dyl~~~LTG~~~~~d~s~As~t~l--~d~~~~~W~~~ll~~~g-~~ 242 (557)
|+++++.|+++||+|+++|+||+|+|+++|++++|||.|+|||+.. +|++|.+++ ||+++++|++++|+.+| ++
T Consensus 135 G~~~~~~~~~~Kl~Wl~~~~Pe~~~~~~~~~~~~dyl~~~LTG~~~---~s~as~t~~~~~d~~~~~W~~~ll~~~gi~~ 211 (554)
T 3l0q_A 135 GGVISPEMQTPKLLWLKQHMPNTWSNVGHLFDLPDFLTWRATKDET---RSLCSTVCKWTYLGHEDRWDPSYFKLVGLAD 211 (554)
T ss_dssp TTCCCTTSHHHHHHHHHHHCHHHHHHEEEEEEHHHHHHHHHHSCCC---EEHHHHHHHSCCBTTTTBCCHHHHHHHTCGG
T ss_pred CCCCChhhHHHHHHHHHHhChHHHHHhceEEcHHHHHHHHHhCCcc---ccccchhhccccccccCCCCHHHHHHcCCcc
Confidence 9999999999999999999999999999999999999999999864 566777654 78899999999999999 42
Q ss_pred hh----hhcC-CcccCCcccc-ccCHHHHHHcCCCCCCeEEEcCChhhhhhhcc-CCC-CCC-------cEEEEecccce
Q 008692 243 LE----EKLG-KLAPAHAVAG-CIAPYFVERFHFNKNCLVVQWSGDNPNSLAGL-TLS-TSG-------DLAISLGTSDT 307 (557)
Q Consensus 243 ~~----~~LP-~i~~~~~~~G-~l~~~~a~~~GL~~g~pV~~G~~D~~aa~~g~-g~~-~~g-------~~~~~~GTs~~ 307 (557)
.. ++|| +++++++++| +|++++|+++||++||||++|++|++|+++|+ |+. ++| ++.+++|||++
T Consensus 212 ~~~~~~~~Lp~~i~~~~~~~G~~lt~~~A~~~GL~~g~pV~~g~gD~~aa~lg~~G~~~~~G~~~~~~~~~~~~~GTs~~ 291 (554)
T 3l0q_A 212 LLDNNAAKIGATVKPMGAPLGHGLSQRAASEMGLIPGTAVSVSIIDAHAGTIGILGASGVTGENANFDRRIALIGGTSTA 291 (554)
T ss_dssp GGHHHHTTTCSCEECTTCBCTTSSCHHHHHHHTCCTTCEEBCCEEHHHHHHHHHTTCCCTTSCCCCTTTEEEEECSSSEE
T ss_pred ccchhHHhCCCcccCCcCeeCcccCHHHHHHhCCCCCCeEEEeChHHHhHHhhccccccCCCccccccceEEEEecchhe
Confidence 11 2899 6999999999 89999999999999999999999999999996 776 688 78899999999
Q ss_pred eccccCCCCCCCcce--eecCccCCCcEEEEEEeechhhHHHHHHHHhc-------------CchHHHHHHHHhcCCCC-
Q 008692 308 VFGITDDPEPRLEGH--VFPNPVDTKGYMIMLVYKNASLTREDVRNRCA-------------EKSWDVFNKYLQQTPPL- 371 (557)
Q Consensus 308 ~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~G~~~~W~~~~~~-------------~~~~~~l~~~a~~~~~g- 371 (557)
+.+++++|..++..+ .+++ ..++.|+.+++++++|.+++|+++.++ .+.|+.|+++++++++|
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~a~~~~~~~~~~l~~~~~~~~~~~ 370 (554)
T 3l0q_A 292 HMAMSRSAHFISGIWGPYYSA-ILPEYWLNEGGQSATGALIDHIIQSHPCYPALLEQAKNKGETIYEALNYILRQMAGEP 370 (554)
T ss_dssp EEEEESSCCCCTTSEEEEETS-SSTTCEEEEEEESCSHHHHHHHHHTSTTHHHHHHHHHHTTCCHHHHHHHHHHHHHSSG
T ss_pred eeeecCCccccCCcceeeccc-ccCCceEecchhhhhHHHHHHHHHhcccchHHHHHHHhcCCCHHHHHHHHHHhcCCCC
Confidence 999999887766543 2344 348899999999999999999999763 24588898888888776
Q ss_pred ------CCCeEeEeccCCCCCCCCCCceeeeeecccccccccccccccccCCChhhH---HHHHHHHHHHHHHHHHHHcC
Q 008692 372 ------NGGKMGFYYKEHEILPPLPVGFHRYILENFEGETLDGVNEVEVKEFDPPSE---VRALVEGQFLSMRGHAERFG 442 (557)
Q Consensus 372 ------~~gl~~lP~l~Ger~P~~~~g~~~~~~~~~~~g~~~Gl~~~~~~~~~~~~l---~rAvlEgia~~~r~~~~~l~ 442 (557)
++|++|+|||+|||+|+ |++.+||+|+||+.. |+++|| +||++|||||++|++++.|+
T Consensus 371 ~~~~~~~~gl~flP~~~Ger~P~---------~d~~arg~~~Gl~~~----~~~~~l~r~~rAvlEgia~~~r~~~e~l~ 437 (554)
T 3l0q_A 371 ENIAFLTNDIHMLPYFHGNRSPR---------ANPNLTGIITGLKLS----TTPEDMALRYLATIQALALGTRHIIETMN 437 (554)
T ss_dssp GGGGGGGTTCCEECCTTCBCSSS---------CBTTCCCEECSCCSC----CSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccccccCceEEcccccCCCCCC---------CCCCCcEEEECCCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 79999999999999998 899999999999987 799999 88999999999999999998
Q ss_pred C-CCCCCEEEEecCCcchhhHHHHHHHHhCCceEEecCCCchhHHHHHHHHhccccccCCCCCCHHHHHhhhccccccee
Q 008692 443 L-PSPPRRIIATGGASANQTILSCLASIYGCDIYTVQRPDSASLGAALRAAHGYLCSKKGSFVPISNMYKDKLEKTSLSC 521 (557)
Q Consensus 443 ~-~~~~~~i~~~GGga~s~~w~Qi~Advlg~pv~~~~~~e~~alGAA~lA~~a~~~~~~G~~~~~~~a~~~~~~~~~~~~ 521 (557)
+ |.++++|+++||++||++|+||+|||||+||++++..|++|+|||++|+++ .|.|+|++++.++ +.+..++|
T Consensus 438 ~~g~~~~~i~~~GG~aks~~~~Qi~ADv~g~pV~~~~~~e~~alGAA~lA~~a-----~G~~~~~~~a~~~-~~~~~~~~ 511 (554)
T 3l0q_A 438 QNGYNIDTMMASGGGTKNPIFVQEHANATGCAMLLPEESEAMLLGSAMMGTVA-----AGVFESLPEAMAA-MSRIGKTV 511 (554)
T ss_dssp TTTCCCCEEEEESGGGGCHHHHHHHHHHHCCEEEEESCSCHHHHHHHHHHHHH-----TTSSSSHHHHHHH-HCCEEEEE
T ss_pred HcCCCCCEEEEeCccccCHHHHHHHHHhhCCeEEecCCCcchHHHHHHHHHHH-----cCCcCCHHHHHHH-hcCCCcEE
Confidence 6 888999999999999999999999999999999999999999999999999 9999999998765 56778899
Q ss_pred ec-ccccCchhhHHHHHHHHHHHHHHHHHHHH
Q 008692 522 KL-AVTAGDQQLVSKYAVMMKKRLEIENRLVE 552 (557)
Q Consensus 522 ~P-~~~~~~~~~~~~Y~~~y~~y~~l~~~l~~ 552 (557)
+| ++++ ++.|+++|++|+++|+++++
T Consensus 512 ~P~~~~~-----~~~Y~~~y~~y~~l~~~~~~ 538 (554)
T 3l0q_A 512 TPQTNKI-----KAYYDRKYRVFHQMYHDHMR 538 (554)
T ss_dssp CCCCHHH-----HHHHHHHHHHHHHHHHHHHH
T ss_pred eCCCHHH-----HHHHHHHHHHHHHHHHHHHH
Confidence 99 9988 99999999999999999987
No 9
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=100.00 E-value=2.9e-95 Score=794.18 Aligned_cols=478 Identities=16% Similarity=0.175 Sum_probs=432.1
Q ss_pred CCcEEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhc--
Q 008692 8 KDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS-- 85 (557)
Q Consensus 8 ~~~~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~-- 85 (557)
+++|+||||+|||++|++|||.+|+++++.+++++..+|++|| +||||+ +||++++++++++.+.
T Consensus 1 ~~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~---~e~dp~----------~~~~~~~~~i~~~~~~~~ 67 (510)
T 2p3r_A 1 EKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGW---VEHDPM----------EIWATQSSTLVEVLAKAD 67 (510)
T ss_dssp CCCEEEEEEECSSEEEEEEECTTCCEEEEEEEECCCBCSSTTC---CEECHH----------HHHHHHHHHHHHHHHHTT
T ss_pred CCcEEEEEEcCCcceEEEEECCCCCEEEEEEEecccccCCCCc---EEECHH----------HHHHHHHHHHHHHHHHcC
Confidence 4579999999999999999999999999999999988888875 888888 9999999999987764
Q ss_pred CCCCCeeEEEEeccccceEEEcCC-CccccccCCCCCCcccccccccCCCCCccccCCCcHHHHHHHHHHhCChHHHHHH
Q 008692 86 LDLSKVTAVSGSGQQHGSVYWKKG-SATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKL 164 (557)
Q Consensus 86 ~~~~~I~aIgis~~~~~~v~vD~~-g~pl~~~~d~~~pl~~~l~~~~~l~~~i~w~D~Ra~~~~~~l~~~~~~~~~~~~~ 164 (557)
.++.+|.+||||+|||++|+||++ |+| ++|+|+|+|+|+.++++++.+.. ..++++++
T Consensus 68 ~~~~~I~~Igis~~~~~~v~~D~~~G~~--------------------l~~~i~W~D~R~~~~~~~l~~~~-~~~~~~~~ 126 (510)
T 2p3r_A 68 ISSDQIAAIGITNQRETTIVWEKETGKP--------------------IYNAIVWQCRRTAEICEHLKRDG-LEDYIRSN 126 (510)
T ss_dssp CCGGGEEEEEEEECSSCBEEEETTTCCB--------------------SSCEECTTCCTTHHHHHHHHHTT-CHHHHHHH
T ss_pred CChhheEEEEEeCCcCcEEEEECCCCeE--------------------CcccccccCccHHHHHHHHHhcc-cHHHHHHH
Confidence 456789999999999999999997 998 48999999999999999999875 46889999
Q ss_pred hCCCCCCCChHHHHHHHhhhCChhhhcccc----eeechhhHHHHHhC--CcccccccccccccccccCCCCCcHHHHHH
Q 008692 165 TGSRGYERFTGPQIRKLFQTQPGVYDDTER----ISVVSSFMASLLIG--AYACIDETDAAGMNLMDIRQRVWSKIVLEA 238 (557)
Q Consensus 165 tG~~~~~~~~~~kl~Wl~~~~pe~~~~~~~----~l~~~dyl~~~LTG--~~~~~d~s~As~t~l~d~~~~~W~~~ll~~ 238 (557)
||+++++.|+++||+|+++|+||+|+|+++ |++++|||.|+||| +.+ +|+|+||+|+|||+++++||+++|+.
T Consensus 127 tG~~~~~~~~~~kl~Wl~~~~pe~~~~~~~~~~l~~~~~dyl~~~LTG~~~~~-td~s~As~t~l~d~~~~~W~~~ll~~ 205 (510)
T 2p3r_A 127 TGLVIDPYFSGTKVKWILDHVEGSRERARRGELLFGTVDTWLIWKMTQGRVHV-TDYTNASRTMLFNIHTLDWDDKMLEV 205 (510)
T ss_dssp HCCCSSTTSHHHHHHHHHHHSTTHHHHHHTTCEEEECHHHHHHHHHTTTSCCE-EEHHHHHTTSSEETTTTEECHHHHHH
T ss_pred hCCCCCcccHHHHHHHHHHcCHHHHHHHhcCCeEecCHHHHHHHHhcCCCeEE-eehhHhhhhccccCccCCCCHHHHHH
Confidence 999999999999999999999999999998 77899999999999 777 99999999999999999999999999
Q ss_pred cCCchhhhcCCcccCCccccccCHHHHHHcCCCCCCeEEEcCChhhhhhhccCCCCCCcEEEEecccceecccc-CCCCC
Q 008692 239 TAPSLEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTVFGIT-DDPEP 317 (557)
Q Consensus 239 ~g~~~~~~LP~i~~~~~~~G~l~~~~a~~~GL~~g~pV~~G~~D~~aa~~g~g~~~~g~~~~~~GTs~~~~~~~-~~~~~ 317 (557)
+|++ .++||+|+++++++|++++ +.+| ++||||++|++|++|+++|+|++++|++++++|||+++.+.+ ++|..
T Consensus 206 ~gi~-~~~LP~i~~~~~~~G~~~~---~~lG-~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~ 280 (510)
T 2p3r_A 206 LDIP-REMLPEVRRSSEVYGQTNI---DGKG-GTRIPISGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTGEKAVK 280 (510)
T ss_dssp HTCC-GGGCCEEECSEEEEEEECT---TCTT-SCCEEEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTTCCCC
T ss_pred hCCC-HHHCCceecCCCceeeech---hhcC-CCCCeEEEECchHHHHHHhcCCCCCCcEEEeecchheeEEecCCcccc
Confidence 9933 7999999999999999976 4577 999999999999999999999999999999999999776665 45655
Q ss_pred CCcc--eeecCccC-CCcEEEEEEeechhhHHHHHHHHhcC-chHHHHHHHHhcCCCCCCCeEeEeccCCCCCCCCCCce
Q 008692 318 RLEG--HVFPNPVD-TKGYMIMLVYKNASLTREDVRNRCAE-KSWDVFNKYLQQTPPLNGGKMGFYYKEHEILPPLPVGF 393 (557)
Q Consensus 318 ~~~~--~~~~~~~~-~g~~~~~~~~~~~G~~~~W~~~~~~~-~~~~~l~~~a~~~~~g~~gl~~lP~l~Ger~P~~~~g~ 393 (557)
++.+ ..++|.+. ++.|..+++++++|.+++|+++.++. .+|+++++++++++ +++|++|+|||.|||+|+
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~-~~~gl~~~P~~~G~r~P~----- 354 (510)
T 2p3r_A 281 SENGLLTTIACGPTGEVNYALEGAVFMAGASIQWLRDEMKLINDAYDSEYFATKVQ-NTNGVYVVPAFTGLGAPY----- 354 (510)
T ss_dssp CSSSCEEEEEECTTSCEEEEEEEEESCSHHHHHHHHHTSCCCCSSSCHHHHHTTSS-SCTTCEEECCTTCCBTTT-----
T ss_pred CCCCeeEEEeeecCCCceEEEccchhhHHHHHHHHHHHccCCCcHHHHHHHHhhCC-CCCceEEeCcccCCCCCC-----
Confidence 5443 23555432 34799999999999999999998864 46888999998875 689999999999999998
Q ss_pred eeeeecccccccccccccccccCCChhhHHHHHHHHHHHHHHHHHHHcCC--CCCCCEEEEecCCcchhhHHHHHHHHhC
Q 008692 394 HRYILENFEGETLDGVNEVEVKEFDPPSEVRALVEGQFLSMRGHAERFGL--PSPPRRIIATGGASANQTILSCLASIYG 471 (557)
Q Consensus 394 ~~~~~~~~~~g~~~Gl~~~~~~~~~~~~l~rAvlEgia~~~r~~~~~l~~--~~~~~~i~~~GGga~s~~w~Qi~Advlg 471 (557)
|++.+||+|+|++.. |+++||+||++|||||.+|++++.|++ |.++++|+++||++||++|+||+||++|
T Consensus 355 ----~d~~arg~~~Gl~~~----~~~~~l~RAvlEgia~~~r~~~~~l~~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~g 426 (510)
T 2p3r_A 355 ----WDPYARGAIFGLTRG----VNANHIIRATLESIAYQTRDVLEAMQADSGIRLHALRVDGGAVANNFLMQFQSDILG 426 (510)
T ss_dssp ----CCTTCCEEEEEECTT----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCSEEEEESGGGGCHHHHHHHHHHHT
T ss_pred ----CCCCCCEEEECCCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEEeCchhcCHHHHHHHHHHhC
Confidence 899999999999987 799999999999999999999999974 7889999999999999999999999999
Q ss_pred CceEEecCCCchhHHHHHHHHhccccccCCCCCCHHHHHhhhcccccceeecccccCchhhHHHHHHHHHHHHHHHHHHH
Q 008692 472 CDIYTVQRPDSASLGAALRAAHGYLCSKKGSFVPISNMYKDKLEKTSLSCKLAVTAGDQQLVSKYAVMMKKRLEIENRLV 551 (557)
Q Consensus 472 ~pv~~~~~~e~~alGAA~lA~~a~~~~~~G~~~~~~~a~~~~~~~~~~~~~P~~~~~~~~~~~~Y~~~y~~y~~l~~~l~ 551 (557)
+||+++...|++|+|||++|+++ .|.|+|++++.+ +.+..++|+|+++ .+.|+++|++|+++|++++
T Consensus 427 ~pV~~~~~~e~~alGaA~lA~~a-----~G~~~~~~~~~~--~~~~~~~~~P~~~------~~~~~~~y~~~~~~~~~~~ 493 (510)
T 2p3r_A 427 TRVERPEVREVTALGAAYLAGLA-----VGFWQNLDELQE--KAVIEREFRPGIE------TTERNYRYAGWKKAVKRAM 493 (510)
T ss_dssp SEEEEESCCCHHHHHHHHHHHHH-----HTSSSCGGGGTT--CCCEEEEECCCSC------HHHHHHHHHHHHHHHHHHS
T ss_pred CceEecCCCCcHHHHHHHHHHHH-----hCccCCHHHHHH--hcCCCeEECCCCC------HHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999 999999998643 4567889999974 5899999999999999976
Q ss_pred H
Q 008692 552 E 552 (557)
Q Consensus 552 ~ 552 (557)
.
T Consensus 494 ~ 494 (510)
T 2p3r_A 494 A 494 (510)
T ss_dssp S
T ss_pred h
Confidence 4
No 10
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=100.00 E-value=1.6e-94 Score=787.43 Aligned_cols=478 Identities=16% Similarity=0.183 Sum_probs=432.6
Q ss_pred CCCCcEEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhc
Q 008692 6 LPKDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS 85 (557)
Q Consensus 6 ~~~~~~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~ 85 (557)
.|+ +|+||||+|||++|++|||.+|+++++.+++++..+|++|| +||||+ +||++++++++++.+.
T Consensus 3 aM~-~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~---~e~d~~----------~~~~~~~~~i~~~~~~ 68 (501)
T 3g25_A 3 AME-KYILSIDQGTTSSRAILFNQKGEIAGVAQREFKQYFPQSGW---VEHDAN----------EIWTSVLAVMTEVINE 68 (501)
T ss_dssp CCC-CEEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTC---CEECHH----------HHHHHHHHHHHHHHHT
T ss_pred ccc-cEEEEEEeCccceEEEEEcCCCCEEEEEEeecccccCCCCc---EEECHH----------HHHHHHHHHHHHHHHh
Confidence 453 59999999999999999999999999999999988888875 888888 9999999999988764
Q ss_pred --CCCCCeeEEEEeccccceEEEcCC-CccccccCCCCCCcccccccccCCCCCccccCCCcHHHHHHHHHHhCChHHHH
Q 008692 86 --LDLSKVTAVSGSGQQHGSVYWKKG-SATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELS 162 (557)
Q Consensus 86 --~~~~~I~aIgis~~~~~~v~vD~~-g~pl~~~~d~~~pl~~~l~~~~~l~~~i~w~D~Ra~~~~~~l~~~~~~~~~~~ 162 (557)
.++.+|.+||||+|+|++++||++ |+| ++|+|+|+|+|+.++++++.+.. ..++++
T Consensus 69 ~~~~~~~I~~Igis~~~~~~v~~D~~~G~~--------------------l~~~i~w~D~R~~~~~~~l~~~~-~~~~~~ 127 (501)
T 3g25_A 69 NDVRADQIAGIGITNQRETTVVWDKHTGRP--------------------IYHAIVWQSRQTQSICSELKQQG-YEQTFR 127 (501)
T ss_dssp TTCCGGGEEEEEEEECSSCEEEEETTTCCB--------------------SSCEECTTCCTTHHHHHHHHHTT-CHHHHH
T ss_pred cCCCcccEEEEEEECCcCcEEEEECCCCeE--------------------CCCceeeccCChHHHHHHHHhcc-CHHHHH
Confidence 456789999999999999999998 998 48999999999999999999874 468899
Q ss_pred HHhCCCCCCCChHHHHHHHhhhCChhhhcccc----eeechhhHHHHHhC--CcccccccccccccccccCCCCCcHHHH
Q 008692 163 KLTGSRGYERFTGPQIRKLFQTQPGVYDDTER----ISVVSSFMASLLIG--AYACIDETDAAGMNLMDIRQRVWSKIVL 236 (557)
Q Consensus 163 ~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~~~~----~l~~~dyl~~~LTG--~~~~~d~s~As~t~l~d~~~~~W~~~ll 236 (557)
++||+++++.++++||+|+++|+||+|+++++ |++++|||.|+||| +.+ +|+|+||+|+|||+++++|++++|
T Consensus 128 ~~tG~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~l~~~~~dyl~~~LTG~~~~~-td~s~As~t~l~d~~~~~W~~~ll 206 (501)
T 3g25_A 128 DKTGLLLDPYFAGTKVKWILDNVEGAREKAENGDLLFGTIDTWLVWKLSGKAAHI-TDYSNASRTLMFNIHDLEWDDELL 206 (501)
T ss_dssp HHHSCCSSTTSHHHHHHHHHHHSTTHHHHHHTTCEEEEEHHHHHHHHHTTTSCCE-EEHHHHTTSSSEETTTTEECHHHH
T ss_pred HHHCCCCCchhHHHHHHHHHHhCHHHHHHHhcCCeEEecHHHHHHHHhcCCCeee-eeHHHhhcccCeeCCCCCCCHHHH
Confidence 99999999999999999999999999999998 78899999999999 676 999999999999999999999999
Q ss_pred HHcCCchhhhcCCcccCCccccccCHHHHHHcCCCCCCeEEEcCChhhhhhhccCCCCCCcEEEEecccceeccccC-CC
Q 008692 237 EATAPSLEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTVFGITD-DP 315 (557)
Q Consensus 237 ~~~g~~~~~~LP~i~~~~~~~G~l~~~~a~~~GL~~g~pV~~G~~D~~aa~~g~g~~~~g~~~~~~GTs~~~~~~~~-~~ 315 (557)
+.+|.+ +++||+|+++++++|+++++. ++| +||||++|++|++|+++|+|++++|++++++|||+++.+.++ +|
T Consensus 207 ~~~gi~-~~~LP~i~~~~~~~G~~~~~~--~~g--~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~ 281 (501)
T 3g25_A 207 ELLTVP-KNMLPEVKASSEVYGKTIDYH--FYG--QEVPIAGVAGDQQAALFGQACFERGDVKNTYGTGGFMLMNTGDKA 281 (501)
T ss_dssp HHHTCC-GGGCCEEECSEEEEEECCGGG--TTT--CCCEEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTTSC
T ss_pred HHhCcC-HHHCCceecCCCceeccchHH--hCC--CCCeEEEECccHHHHHHhCCCCCCCcEEEEccchhheeeecCCcc
Confidence 999933 799999999999999999864 455 899999999999999999999999999999999998877775 45
Q ss_pred CCCCcc--eeecCccCCC--cEEEEEEeechhhHHHHHHHHhcC-chHHHHHHHHhcCCCCCCCeEeEeccCCCCCCCCC
Q 008692 316 EPRLEG--HVFPNPVDTK--GYMIMLVYKNASLTREDVRNRCAE-KSWDVFNKYLQQTPPLNGGKMGFYYKEHEILPPLP 390 (557)
Q Consensus 316 ~~~~~~--~~~~~~~~~g--~~~~~~~~~~~G~~~~W~~~~~~~-~~~~~l~~~a~~~~~g~~gl~~lP~l~Ger~P~~~ 390 (557)
..++.+ ..++|.+ ++ .|..+++++++|.+++|+++.++. .+|++++++++++|++ +|++|+|||.|||+|+
T Consensus 282 ~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~~~-~gl~~~P~~~G~r~P~-- 357 (501)
T 3g25_A 282 VKSESGLLTTIAYGI-DGKVNYALEGSIFVSGSAIQWLRDGLRMINSAPQSESYATRVDST-EGVYVVPAFVGLGTPY-- 357 (501)
T ss_dssp CCCSSSCEEEEEEEE-TTEEEEEEEEEESCSTHHHHHHHHTSCCCSSGGGHHHHHTTSSCC-TTCEEECCTTCBCTTT--
T ss_pred ccCCCCeEEEeeEec-CCccEEEEecccccHHHHHHHHHHHcCCCCcHHHHHHHHhhCCCC-CeEEEecccccCCCCC--
Confidence 544433 2356554 55 699999999999999999998864 5789999999988875 8999999999999998
Q ss_pred CceeeeeecccccccccccccccccCCChhhHHHHHHHHHHHHHHHHHHHcCC--CCCCCEEEEecCCcchhhHHHHHHH
Q 008692 391 VGFHRYILENFEGETLDGVNEVEVKEFDPPSEVRALVEGQFLSMRGHAERFGL--PSPPRRIIATGGASANQTILSCLAS 468 (557)
Q Consensus 391 ~g~~~~~~~~~~~g~~~Gl~~~~~~~~~~~~l~rAvlEgia~~~r~~~~~l~~--~~~~~~i~~~GGga~s~~w~Qi~Ad 468 (557)
|++.+||+|+|++.. |+++||+||++|||||.+|++++.|++ |.++++|+++||++||++|+||+||
T Consensus 358 -------~d~~arg~~~Gl~~~----~~~~~l~RAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~aks~~~~Qi~Ad 426 (501)
T 3g25_A 358 -------WDSEARGAIFGLTRG----TEKEHFIRATLESLCYQTRDVMEAMSKDSGIDVQSLRVDGGAVKNNFIMQFQAD 426 (501)
T ss_dssp -------CBTTCCEEEEEECTT----CCHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCSEEEEESGGGGCHHHHHHHHH
T ss_pred -------CCCCCCEEEEccCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecchhcCHHHHHHHHH
Confidence 899999999999976 799999999999999999999999974 7789999999999999999999999
Q ss_pred HhCCceEEecCCCchhHHHHHHHHhccccccCCCCCCHHHHHhhhcccccceeecccccCchhhHHHHHHHHHHHHHHHH
Q 008692 469 IYGCDIYTVQRPDSASLGAALRAAHGYLCSKKGSFVPISNMYKDKLEKTSLSCKLAVTAGDQQLVSKYAVMMKKRLEIEN 548 (557)
Q Consensus 469 vlg~pv~~~~~~e~~alGAA~lA~~a~~~~~~G~~~~~~~a~~~~~~~~~~~~~P~~~~~~~~~~~~Y~~~y~~y~~l~~ 548 (557)
++|+||+++...|++|+|||++|+++ .|.|+|++++.+ +.+..++|+|+++. ..|+++|++|+++|+
T Consensus 427 v~g~pV~~~~~~e~~alGaA~la~~a-----~G~~~~~~~~~~--~~~~~~~~~P~~~~------~~~~~~y~~~~~~~~ 493 (501)
T 3g25_A 427 IVNTSVERPEIQETTALGAAFLAGLA-----VGFWESKDDIAK--NWKLEEKFDPKMDE------GEREKLYRGWKKAVE 493 (501)
T ss_dssp HHTSEEEEESCCCHHHHHHHHHHHHH-----TTSSSCTHHHHH--HCCEEEEECCCCCH------HHHHHHHHHHHHHHH
T ss_pred HhCCceEecCCCcchHHHHHHHHHHH-----hCccCCHHHHHH--hccCCeEECCCCCH------HHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 999999999754 45778899999976 469999999999999
Q ss_pred HHHH
Q 008692 549 RLVE 552 (557)
Q Consensus 549 ~l~~ 552 (557)
+++.
T Consensus 494 ~~~~ 497 (501)
T 3g25_A 494 ATQV 497 (501)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 8764
No 11
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=100.00 E-value=4.1e-95 Score=796.22 Aligned_cols=478 Identities=16% Similarity=0.175 Sum_probs=422.8
Q ss_pred CCcEEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhc--
Q 008692 8 KDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS-- 85 (557)
Q Consensus 8 ~~~~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~-- 85 (557)
++||+||||+||||+|++|||.+|+++++++++|+..+|++|| +||||+ +||++++++++++.+.
T Consensus 2 ekkYvlgID~GTss~Ka~l~d~~G~~va~~~~~~~~~~p~~G~---~Eqdp~----------~~w~~~~~~i~~~l~~~~ 68 (526)
T 3ezw_A 2 EKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGW---VEHDPM----------EIWATQSSTLVEVLAKAD 68 (526)
T ss_dssp -CCEEEEEEECSSEEEEEEECTTCCEEEEEEEECCCBCSSTTC---CEECHH----------HHHHHHHHHHHHHHHHHT
T ss_pred CceEEEEEEccccceeeeEEcCCCCEEEEEEEecCcccCCCCc---EEECHH----------HHHHHHHHHHHHHHHHcC
Confidence 5689999999999999999999999999999999999999876 899998 9999999999987664
Q ss_pred CCCCCeeEEEEeccccceEEEcCC-CccccccCCCCCCcccccccccCCCCCccccCCCcHHHHHHHHHHhCChHHHHHH
Q 008692 86 LDLSKVTAVSGSGQQHGSVYWKKG-SATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKL 164 (557)
Q Consensus 86 ~~~~~I~aIgis~~~~~~v~vD~~-g~pl~~~~d~~~pl~~~l~~~~~l~~~i~w~D~Ra~~~~~~l~~~~~~~~~~~~~ 164 (557)
+++++|+|||||+||+++|+||++ |+| |+|+|+|+|+|+.++++++.+.. ..+.++++
T Consensus 69 ~~~~~I~aIgis~q~~~~v~~D~~~G~p--------------------l~~ai~W~D~R~~~~~~~l~~~~-~~~~i~~~ 127 (526)
T 3ezw_A 69 ISSDQIAAIGITNQRETTIVWEKETGKP--------------------IYNAIVWQCRRTAEICEHLKRDG-LEDYIRSN 127 (526)
T ss_dssp CCGGGEEEEEEEECSSCBEEEETTTCCB--------------------SSCEECTTCCTTHHHHHHHHHTT-CHHHHHHH
T ss_pred CChhhEEEEEEeCCCCCEEEEECCCCeE--------------------cccceecCCcchHHHHHHHHhhc-cHHHHHHH
Confidence 677899999999999999999975 998 48999999999999999999875 46789999
Q ss_pred hCCCCCCCChHHHHHHHhhhCChhhhcccc----eeechhhHHHHHhCC-cccccccccccccccccCCCCCcHHHHHHc
Q 008692 165 TGSRGYERFTGPQIRKLFQTQPGVYDDTER----ISVVSSFMASLLIGA-YACIDETDAAGMNLMDIRQRVWSKIVLEAT 239 (557)
Q Consensus 165 tG~~~~~~~~~~kl~Wl~~~~pe~~~~~~~----~l~~~dyl~~~LTG~-~~~~d~s~As~t~l~d~~~~~W~~~ll~~~ 239 (557)
||+++++.++++||+|+++|+|++|+++++ +..+++||.|+|||. ..++|+|+||+|+|||+++++|++++++.+
T Consensus 128 tG~~~~~~~~~~kl~Wl~~~~p~~~~~~~~~~~~~~~i~~~L~~~Lt~g~~~~td~s~As~t~l~d~~~~~w~~~ll~~~ 207 (526)
T 3ezw_A 128 TGLVIDPYFSGTKVKWILDHVEGSRERARRGELLFGTVDTWLIWKMTQGRVHVTDYTNASRTMLFNIHTLDWDDKMLEVL 207 (526)
T ss_dssp HCCCSSTTSHHHHHHHHHHHSTTHHHHHHTTCEEEECHHHHHHHHHTTTSCCEEEHHHHTTSSSEETTTTEECHHHHHHH
T ss_pred hCCCCCcccHHHHHHHHHHcCchHHHHHHHhhhhccchhHHHhhhhcCCCceEEEchhhccccCcCccccCcCHHHHHHc
Confidence 999999999999999999999999999997 455778899999963 223999999999999999999999999999
Q ss_pred CCchhhhcCCcccCCccccccCHHHHHHcCCCCCCeEEEcCChhhhhhhccCCCCCCcEEEEecccceeccccCCCCCCC
Q 008692 240 APSLEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTVFGITDDPEPRL 319 (557)
Q Consensus 240 g~~~~~~LP~i~~~~~~~G~l~~~~a~~~GL~~g~pV~~G~~D~~aa~~g~g~~~~g~~~~~~GTs~~~~~~~~~~~~~~ 319 (557)
|.+ .++||+++++++++|+++++++. ..|+||++|++|++|+++|+|++++|++.+++|||+++.+.++++..++
T Consensus 208 gi~-~~~LP~i~~~~~~~G~~~~~~~~----~~gipV~~g~gD~~aa~~G~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~ 282 (526)
T 3ezw_A 208 DIP-REMLPEVRRSSEVYGQTNIDGKG----GTRIPISGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTGEKAVKS 282 (526)
T ss_dssp TCC-GGGCCEEECSEEEEEEECTTCTT----SCCEEEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTTSCCCC
T ss_pred CCC-HHHCCCccccccccCccchhhhc----CCCCcEEEEcchHHHHhhhccccccceeEEEeccCeeEecccCCccccc
Confidence 933 79999999999999999988754 4578999999999999999999999999999999999999888765543
Q ss_pred cc--ee--ecCccCCCcEEEEEEeechhhHHHHHHHHhcCchHHHHHHHHhcCCCCCCCeEeEeccCCCCCCCCCCceee
Q 008692 320 EG--HV--FPNPVDTKGYMIMLVYKNASLTREDVRNRCAEKSWDVFNKYLQQTPPLNGGKMGFYYKEHEILPPLPVGFHR 395 (557)
Q Consensus 320 ~~--~~--~~~~~~~g~~~~~~~~~~~G~~~~W~~~~~~~~~~~~l~~~a~~~~~g~~gl~~lP~l~Ger~P~~~~g~~~ 395 (557)
.. .. .+.+..++.|.++++++++|.+++||++.++........+.....+++++|++|+|||+|+|+|+
T Consensus 283 ~~~~~~~~~~~~~~~~~y~~eg~~~~~G~~~~Wl~~~~~~~~~~~~~~~~~~~~~~~~gl~~lP~~~G~r~P~------- 355 (526)
T 3ezw_A 283 ENGLLTTIACGPTGEVNYALEGAVFMAGASIQWLRDEMKLINDAYDSEYFATKVQNTNGVYVVPAFTGLGAPY------- 355 (526)
T ss_dssp SSSCEEEEEECTTSCEEEEEEEEESCSHHHHHHHHHTSCCCCSSSCHHHHHTTSSSCTTCEEECCTTCBCTTT-------
T ss_pred cccceeeeeeccCCcceeeeHHHHHHHHHHHHHHHHHhccccchhHHHHHHhccCCCCCeEEeCCCCCCCCCC-------
Confidence 21 11 22222355799999999999999999998864333223344455677999999999999999998
Q ss_pred eeecccccccccccccccccCCChhhHHHHHHHHHHHHHHHHHHHcCC--CCCCCEEEEecCCcchhhHHHHHHHHhCCc
Q 008692 396 YILENFEGETLDGVNEVEVKEFDPPSEVRALVEGQFLSMRGHAERFGL--PSPPRRIIATGGASANQTILSCLASIYGCD 473 (557)
Q Consensus 396 ~~~~~~~~g~~~Gl~~~~~~~~~~~~l~rAvlEgia~~~r~~~~~l~~--~~~~~~i~~~GGga~s~~w~Qi~Advlg~p 473 (557)
|++.+||+|+||+.. |+++||+||++|||||.+|++++.|++ |.++++|+++||++||++|+||+|||||+|
T Consensus 356 --~d~~arG~~~Glt~~----~~~~~i~RAvlEgia~~~r~~le~l~~~~g~~~~~i~v~GGgaks~~~~Qi~ADvlg~p 429 (526)
T 3ezw_A 356 --WDPYARGAIFGLTRG----VNANHIIRATLESIAYQTRDVLEAMQADSGIRLHALRVDGGAVANNFLMQFQSDILGTR 429 (526)
T ss_dssp --CBTTCCEEEEEECTT----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCSEEEEESGGGGCHHHHHHHHHHHTSE
T ss_pred --CCcccCeEEecCCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEECchhhCHHHHHHHHHHHCCE
Confidence 899999999999987 799999999999999999999999974 889999999999999999999999999999
Q ss_pred eEEecCCCchhHHHHHHHHhccccccCCCCCCHHHHHhhhcccccceeecccccCchhhHHHHHHHHHHHHHHHHHH
Q 008692 474 IYTVQRPDSASLGAALRAAHGYLCSKKGSFVPISNMYKDKLEKTSLSCKLAVTAGDQQLVSKYAVMMKKRLEIENRL 550 (557)
Q Consensus 474 v~~~~~~e~~alGAA~lA~~a~~~~~~G~~~~~~~a~~~~~~~~~~~~~P~~~~~~~~~~~~Y~~~y~~y~~l~~~l 550 (557)
|++++..|++|+|||++|++| +|.|+|++++.+. + +..++|+|++++ ++ |+++|++|++++++.
T Consensus 430 V~~~~~~E~~alGAA~lA~~a-----~G~~~~~~e~~~~-~-~~~~~~~P~~~~-----~~-~~~~y~~w~~av~r~ 493 (526)
T 3ezw_A 430 VERPEVREVTALGAAYLAGLA-----VGFWQNLDELQEK-A-VIEREFRPGIET-----TE-RNYRYAGWKKAVKRA 493 (526)
T ss_dssp EEEESCCCHHHHHHHHHHHHH-----TTSSSCGGGSTTC-C-CEEEEECCCSCH-----HH-HHHHHHHHHHHHHHH
T ss_pred EEeCCCCchHHHHHHHHHHHH-----hCCCCCHHHHHHh-c-CCCeEEcCCCCH-----HH-HHHHHHHHHHHHHHH
Confidence 999999999999999999999 9999999998763 3 567899999987 55 667899999998775
No 12
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.9e-94 Score=786.64 Aligned_cols=474 Identities=18% Similarity=0.184 Sum_probs=422.7
Q ss_pred CcEEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhc--C
Q 008692 9 DSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS--L 86 (557)
Q Consensus 9 ~~~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~--~ 86 (557)
++|+||||+|||++|++|||.+|+++++.+++++..+|++|| +||||+ +||++++++++++.+. .
T Consensus 25 ~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~---~e~dp~----------~~~~~i~~~i~~~~~~~~~ 91 (520)
T 4e1j_A 25 GGYILAIDQGTTSTRAIVFDGNQKIAGVGQKEFKQHFPKSGW---VEHDPE----------EIWQTVVSTVKEAIEKSGI 91 (520)
T ss_dssp SCEEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTC---CEECHH----------HHHHHHHHHHHHHHHTTTC
T ss_pred hCeEEEEEeCCcceEEEEECCCCCEEEEEEEecccccCCCCc---EEECHH----------HHHHHHHHHHHHHHHhcCC
Confidence 469999999999999999999999999999999988888875 888888 9999999999988764 4
Q ss_pred CCCCeeEEEEeccccceEEEc-CCCccccccCCCCCCcccccccccCCCCCccccCCCcHHHHHHHHHHhCChHHHHHHh
Q 008692 87 DLSKVTAVSGSGQQHGSVYWK-KGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLT 165 (557)
Q Consensus 87 ~~~~I~aIgis~~~~~~v~vD-~~g~pl~~~~d~~~pl~~~l~~~~~l~~~i~w~D~Ra~~~~~~l~~~~~~~~~~~~~t 165 (557)
++.+|.+||||+|++++|+|| ++|+| ++|+|+|+|+|+.++++++.+.. ..++++++|
T Consensus 92 ~~~~I~~Igis~~g~~~v~~D~~~G~~--------------------l~~~i~W~D~R~~~~~~~l~~~~-~~~~~~~~t 150 (520)
T 4e1j_A 92 TANDIAAIGITNQRETVVVWDRETGKP--------------------IHNAIVWQDRRTAAFCDKLKKKG-LEKTFVKKT 150 (520)
T ss_dssp CGGGEEEEEEEECSSCEEEEETTTCCB--------------------SSCEECTTCCTTHHHHHHHHHTT-CHHHHHHHH
T ss_pred CcccEEEEEEeCCcceEEEEECCCCeE--------------------CccccccccCCHHHHHHHHHhcc-cHHHHHHHH
Confidence 567899999999999999999 58998 48999999999999999999874 467899999
Q ss_pred CCCCCCCChHHHHHHHhhhCChhhhcccc----eeechhhHHHHHhCC--cccccccccccccccccCCCCCcHHHHHHc
Q 008692 166 GSRGYERFTGPQIRKLFQTQPGVYDDTER----ISVVSSFMASLLIGA--YACIDETDAAGMNLMDIRQRVWSKIVLEAT 239 (557)
Q Consensus 166 G~~~~~~~~~~kl~Wl~~~~pe~~~~~~~----~l~~~dyl~~~LTG~--~~~~d~s~As~t~l~d~~~~~W~~~ll~~~ 239 (557)
|+++++.++++||+|+++|+||+|+|+++ |++++|||.|+|||+ ++ +|+|+||+|+|||+++++||+++|+.+
T Consensus 151 G~~~~~~~~~~kl~Wl~~~~Pe~~~~~~~~~~~~~~~~dyl~~~LTG~~~~~-td~s~As~t~l~d~~~~~W~~~ll~~~ 229 (520)
T 4e1j_A 151 GLLLDPYFSGTKLNWLLSNVKGAQVRAAKGELCFGTIDTFLIWRLTGGECFC-TDATNASRTLLYNIAENAWDDELTEVL 229 (520)
T ss_dssp SSCSSTTSHHHHHHHHHHHSTTHHHHHHTTCEEEEEHHHHHHHHHTTTCCCE-EEHHHHTTSSSEETTTTEECHHHHHHH
T ss_pred CCCCCchhHHHHHHHHHHcChHHHHHHhcCCeEecCHHHHHHHHhcCCCeee-ecHHHhhhhcccccccCCCCHHHHHHc
Confidence 99999999999999999999999999986 678999999999996 66 999999999999999999999999999
Q ss_pred CCchhhhcCCcccCCccccccCHHHHHHcCCCCCCeEEEcCChhhhhhhccCCCCCCcEEEEecccceecccc-CCCCCC
Q 008692 240 APSLEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTVFGIT-DDPEPR 318 (557)
Q Consensus 240 g~~~~~~LP~i~~~~~~~G~l~~~~a~~~GL~~g~pV~~G~~D~~aa~~g~g~~~~g~~~~~~GTs~~~~~~~-~~~~~~ 318 (557)
|++ +++||+|+++++++|+++++ ||++||||++|++|++|+++|+|++++|++++++|||+++.+.+ ++|..+
T Consensus 230 gi~-~~~LP~i~~~~~~~G~~~~~-----~l~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~ 303 (520)
T 4e1j_A 230 RVP-KEMLPEVKDCAADFGVTDPS-----LFGAAIPILGVAGDQQAATIGQACFKPGMLKSTYGTGCFALLNTGKDMVRS 303 (520)
T ss_dssp TCC-GGGSCEEECSBSCCCBCCHH-----HHTSCCBEEEECCHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTTCCCCC
T ss_pred CCC-HHHCCceecCCCceeeeChh-----hCCCCCeEEEECCcHHHHHHhCCCCCCCcEEEEecCchheEEecCCccccC
Confidence 943 79999999999999999874 56799999999999999999999999999999999999888877 566655
Q ss_pred Ccce--eecCccC-CCcEEEEEEeechhhHHHHHHHHhcC-chHHHHHHHHhcCCCCCCCeEeEeccCCCCCCCCCCcee
Q 008692 319 LEGH--VFPNPVD-TKGYMIMLVYKNASLTREDVRNRCAE-KSWDVFNKYLQQTPPLNGGKMGFYYKEHEILPPLPVGFH 394 (557)
Q Consensus 319 ~~~~--~~~~~~~-~g~~~~~~~~~~~G~~~~W~~~~~~~-~~~~~l~~~a~~~~~g~~gl~~lP~l~Ger~P~~~~g~~ 394 (557)
+.+. .+++.+. ++.|..+++++++|.+++|+++.++. .+|++++++++++| +++|++|+|||+|||+|+
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~-~~~gl~~lP~l~Ger~P~------ 376 (520)
T 4e1j_A 304 KNRLLTTIAYRLDGETTYALEGSIFVAGAAVQWLRDGLKVIKAAPDTGSLAESAD-PSQEVYLVPAFTGLGAPH------ 376 (520)
T ss_dssp SSSCEEEEEEEETTEEEEEEEEEESCSHHHHHHHHHTTCCC-----CHHHHHTSC-TTCCCEEECCTTCBCTTT------
T ss_pred CCceeeEEeEecCCCceEEEcchHhhHHHHHHHHHHHcCCcccHHHHHHHHhcCC-CCCcEEEEcCccCCCCCC------
Confidence 4432 3455432 23799999999999999999998864 46889999998875 899999999999999998
Q ss_pred eeeecccccccccccccccccCCChhhHHHHHHHHHHHHHHHHHHHcCC-----CCCCCEEEEecCCcchhhHHHHHHHH
Q 008692 395 RYILENFEGETLDGVNEVEVKEFDPPSEVRALVEGQFLSMRGHAERFGL-----PSPPRRIIATGGASANQTILSCLASI 469 (557)
Q Consensus 395 ~~~~~~~~~g~~~Gl~~~~~~~~~~~~l~rAvlEgia~~~r~~~~~l~~-----~~~~~~i~~~GGga~s~~w~Qi~Adv 469 (557)
|++.+||+|+|++.. |+++||+||++|||||.+|++++.|++ | ++++|+++||++||++|+||+||+
T Consensus 377 ---~d~~arg~~~Gl~~~----~~~~~l~RAvlEgia~~~r~~l~~l~~~~~~~g-~~~~i~~~GGgaks~~~~Qi~ADv 448 (520)
T 4e1j_A 377 ---WDPDARGAIFGMTRN----TGPAEFARAALEAVCYQTRDLLEAMHKDWRRNG-NDTVLRVDGGMVASDWTMQRLSDL 448 (520)
T ss_dssp ---CBTTCCCEEEEECTT----CCHHHHHHHHHHHHHHHHHHHHHHHHHHCC------CCEEEESGGGGCHHHHHHHHHH
T ss_pred ---CCCCCCEEEecccCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-CcceEEEeCccccCHHHHHHHHHH
Confidence 899999999999987 799999999999999999999999863 4 789999999999999999999999
Q ss_pred hCCceEEecCCCchhHHHHHHHHhccccccCCCCCCHHHHHhhhcccccceeecccccCchhhHHHHHHHHHHHHHHHHH
Q 008692 470 YGCDIYTVQRPDSASLGAALRAAHGYLCSKKGSFVPISNMYKDKLEKTSLSCKLAVTAGDQQLVSKYAVMMKKRLEIENR 549 (557)
Q Consensus 470 lg~pv~~~~~~e~~alGAA~lA~~a~~~~~~G~~~~~~~a~~~~~~~~~~~~~P~~~~~~~~~~~~Y~~~y~~y~~l~~~ 549 (557)
+|+||+++...|++|+|||++|+++ .|.|+|++++.+ +.+..++|+|++++ ++ |+++|++|+++|++
T Consensus 449 lg~pV~~~~~~e~~alGAA~lA~~a-----~G~~~~~~~~~~--~~~~~~~~~P~~~~-----~~-~~~~y~~~~~~~~~ 515 (520)
T 4e1j_A 449 LDAPVDRPVILETTALGVAWLAGSR-----AGVWPNQEAFAK--SWARDRRFEPHMDE-----AT-RKVKLKGWRSAVKR 515 (520)
T ss_dssp HTSCEEEESCCCHHHHHHHHHHHHH-----HTSSCCHHHHHH--TCCEEEEECCCSCH-----HH-HHHHHHHHHHHHHH
T ss_pred hCCeEEecCCCccHHHHHHHHHHHH-----cCCcCCHHHHHh--hcCCCeEECCCCCH-----HH-HHHHHHHHHHHHHH
Confidence 9999999999999999999999999 999999999874 34678899999987 54 89999999999988
Q ss_pred HH
Q 008692 550 LV 551 (557)
Q Consensus 550 l~ 551 (557)
+.
T Consensus 516 ~~ 517 (520)
T 4e1j_A 516 TL 517 (520)
T ss_dssp HH
T ss_pred Hh
Confidence 64
No 13
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=100.00 E-value=5.3e-92 Score=767.11 Aligned_cols=472 Identities=18% Similarity=0.197 Sum_probs=430.8
Q ss_pred cEEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhc--CC
Q 008692 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS--LD 87 (557)
Q Consensus 10 ~~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~--~~ 87 (557)
+|+||||+|||++|++|||.+|+++++.+++++..+|++|| +||||+ +||++++++++++.+. .+
T Consensus 3 ~~~lgiDiGtt~~k~~l~d~~g~~~~~~~~~~~~~~p~~g~---~e~d~~----------~~~~~~~~~i~~~~~~~~~~ 69 (497)
T 2zf5_O 3 KFVLSLDEGTTSARAIIFDRESNIHGIGQYEFPQHYPRPGW---VEHNPE----------EIWDAQLRAIKDAIQSARIE 69 (497)
T ss_dssp CEEEEEEECSSEEEEEEECTTCCEEEEEEEECCCBCCSTTC---CEECHH----------HHHHHHHHHHHHHHHHHTCC
T ss_pred cEEEEEecCCchhEEEEECCCCCEEEEEEeccceecCCCCc---EEECHH----------HHHHHHHHHHHHHHHhcCCC
Confidence 58999999999999999999999999999999988888875 888888 9999999999987654 45
Q ss_pred CCCeeEEEEeccccceEEEcCCCccccccCCCCCCcccccccccCCCCCccccCCCcHHHHHHHHHHhCChHHHHHHhCC
Q 008692 88 LSKVTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTGS 167 (557)
Q Consensus 88 ~~~I~aIgis~~~~~~v~vD~~g~pl~~~~d~~~pl~~~l~~~~~l~~~i~w~D~Ra~~~~~~l~~~~~~~~~~~~~tG~ 167 (557)
+.+|.+||||+|+|++|+||++|+| ++|+|+|+|.|+.++++++.+. . .++++++||+
T Consensus 70 ~~~i~~Igis~~~~~~v~~D~~G~~--------------------l~~~i~w~D~R~~~~~~~l~~~-~-~~~~~~~tG~ 127 (497)
T 2zf5_O 70 PNQIAAIGVTNQRETTLVWDKDGKP--------------------LYNAIVWQCRRTAEMVEEIKRE-Y-GTMIKEKTGL 127 (497)
T ss_dssp GGGEEEEEEEECSSCEEEECTTCCB--------------------SSCEECTTCCTTHHHHHHHHHH-H-HHHHHHHHSS
T ss_pred cccEEEEEEecCCCcEEEECCCCCC--------------------cccceeecccCcHHHHHHHHhh-h-HHHHHHHhCC
Confidence 6789999999999999999999998 4899999999999999999876 2 4789999999
Q ss_pred CCCCCChHHHHHHHhhhCChhhhcccc----eeechhhHHHHHhCCcccccccccccccccccCCCCCcHHHHHHcCCch
Q 008692 168 RGYERFTGPQIRKLFQTQPGVYDDTER----ISVVSSFMASLLIGAYACIDETDAAGMNLMDIRQRVWSKIVLEATAPSL 243 (557)
Q Consensus 168 ~~~~~~~~~kl~Wl~~~~pe~~~~~~~----~l~~~dyl~~~LTG~~~~~d~s~As~t~l~d~~~~~W~~~ll~~~g~~~ 243 (557)
++++.++++||+|+++|+|++|+++++ |++++|||.|+|||+++ +|+|+||+|++||+++++|++++|+.+|.+
T Consensus 128 ~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~~d~l~~~LTG~~~-td~s~As~t~l~d~~~~~W~~~ll~~~gi~- 205 (497)
T 2zf5_O 128 VPDAYFSASKLKWLLDNVPGLREKAEKGEVMFGTVDTFLIYRLTGEHV-TDYSNASRTMLFNIKKLDWDDELLELFDIP- 205 (497)
T ss_dssp CCCTTSHHHHHHHHHHHSTTHHHHHHTTCCEEEEHHHHHHHHHHSCCE-EEHHHHTTSSSEETTTTEECHHHHHHTTCC-
T ss_pred CCCchhHHHHHHHHHHcCHHHHHHHhcCCCEEEcHHHHHHHHHhCCee-eeHHHhhhhcCccCCCCCcCHHHHHHcCcC-
Confidence 999999999999999999999999998 99999999999999997 999999999999999999999999999933
Q ss_pred hhhcCCcccCCccccccCHHHHHHcCCCCCCeEEEcCChhhhhhhccCCCCCCcEEEEecccceeccccCCCCCCCcc--
Q 008692 244 EEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTVFGITDDPEPRLEG-- 321 (557)
Q Consensus 244 ~~~LP~i~~~~~~~G~l~~~~a~~~GL~~g~pV~~G~~D~~aa~~g~g~~~~g~~~~~~GTs~~~~~~~~~~~~~~~~-- 321 (557)
.++||+|+++++++|+++++ .+| +|+||++|++|++|+++|+|+.++|++++++|||+++.+.+++|..++.+
T Consensus 206 ~~~lP~i~~~~~~~G~~~~~---~~g--~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~ 280 (497)
T 2zf5_O 206 ESVLPEVRESSEVYGYTKKE---LLG--AEIPVSGDAGDQQAALFGQAAFEAGMVKATYGTGSFILVNTDKMVLYSDNLL 280 (497)
T ss_dssp GGGCCEEECSEEEEEECCHH---HHS--SCCEEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEEEETCCCCCTTSE
T ss_pred HHHCCCcCCCCCeeeecCHH---HcC--CCCeEEEEccHHHHHHHhCCCCCCCcEEEEcchhheeeEECCCCccCCCCcE
Confidence 68999999999999999987 588 89999999999999999999999999999999999999988887655432
Q ss_pred eeecCccCCC--cEEEEEEeechhhHHHHHHHHhcC-chHHHHHHHHhcCCCCCCCeEeEeccCCCCCCCCCCceeeeee
Q 008692 322 HVFPNPVDTK--GYMIMLVYKNASLTREDVRNRCAE-KSWDVFNKYLQQTPPLNGGKMGFYYKEHEILPPLPVGFHRYIL 398 (557)
Q Consensus 322 ~~~~~~~~~g--~~~~~~~~~~~G~~~~W~~~~~~~-~~~~~l~~~a~~~~~g~~gl~~lP~l~Ger~P~~~~g~~~~~~ 398 (557)
..++|.. ++ .|+.+++++++|.+++|+++.++. .+|++++++++++| +++|++|+|||.|+|+|+ +
T Consensus 281 ~~~~~~~-~~~~~~~~~g~~~~~G~~~~w~~~~~~~~~~~~~l~~~a~~~~-~~~gl~~~P~~~G~r~P~---------~ 349 (497)
T 2zf5_O 281 TTIAWGL-NGRVSYALEGSIFVTGAAVQWLRDGIKIIKHASETEELATKLE-SNEGVYFVPAFVGLGAPY---------W 349 (497)
T ss_dssp EEEEEEE-TTEEEEEEEEEESCSHHHHHHHHHTSCCCSCGGGHHHHHTTSS-SCTTCEEECCTTCBCTTT---------C
T ss_pred EEEEEEc-CCCCEEEEechhhhHHHHHHHHHHHhCCCCcHHHHHHHHhhCC-CCCceEEecCcCCCCCCC---------C
Confidence 3456654 44 799999999999999999998753 46888999988876 689999999999999998 8
Q ss_pred cccccccccccccccccCCChhhHHHHHHHHHHHHHHHHHHHcCC-CCCCCEEEEecCCcchhhHHHHHHHHhCCceEEe
Q 008692 399 ENFEGETLDGVNEVEVKEFDPPSEVRALVEGQFLSMRGHAERFGL-PSPPRRIIATGGASANQTILSCLASIYGCDIYTV 477 (557)
Q Consensus 399 ~~~~~g~~~Gl~~~~~~~~~~~~l~rAvlEgia~~~r~~~~~l~~-~~~~~~i~~~GGga~s~~w~Qi~Advlg~pv~~~ 477 (557)
++.+||+|.|++.. |+++|++||++||+||.+|++++.|++ + ++++|+++||++||++|+||+||++|+||+++
T Consensus 350 d~~arg~~~Gl~~~----~~~~~l~rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~ 424 (497)
T 2zf5_O 350 DQFARGIIIGITRG----TGREHLARATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQFQADILNRKVIRP 424 (497)
T ss_dssp BTTCCEEEEEECTT----CCHHHHHHHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHHHHHHHTSCEEEE
T ss_pred CCCCCEEEEeCCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHHHHhhcCCeEEEc
Confidence 99999999999976 799999999999999999999999986 6 88999999999999999999999999999999
Q ss_pred cCCCchhHHHHHHHHhccccccCCCCCCHHHHHhhhcccccceeecccccCchhhHHHHHHHHHHHHHHHHHHHH
Q 008692 478 QRPDSASLGAALRAAHGYLCSKKGSFVPISNMYKDKLEKTSLSCKLAVTAGDQQLVSKYAVMMKKRLEIENRLVE 552 (557)
Q Consensus 478 ~~~e~~alGAA~lA~~a~~~~~~G~~~~~~~a~~~~~~~~~~~~~P~~~~~~~~~~~~Y~~~y~~y~~l~~~l~~ 552 (557)
...|++|+|||++|+++ .|.|+|++++.+ +.+..++|+|+++. +.|+++|++|+++|+++++
T Consensus 425 ~~~e~~alGaA~lA~~~-----~g~~~~~~~~~~--~~~~~~~~~P~~~~------~~y~~~y~~~~~~~~~~~~ 486 (497)
T 2zf5_O 425 VVKETTALGAAYLAGLA-----VDYWADTREIAE--LWKAERIFEPKMDE------KTRERLYKGWKEAVKRAMG 486 (497)
T ss_dssp SCSCHHHHHHHHHHHHH-----TTSSCCHHHHHT--TCCEEEEECCCCCH------HHHHHHHHHHHHHHHTTTT
T ss_pred CCCcchHHHHHHHHHHH-----hCccCCHHHHHH--hcCCCeEECCCccH------HHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999 999999999863 44567889999853 7899999999999998764
No 14
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=100.00 E-value=2.1e-91 Score=763.45 Aligned_cols=475 Identities=16% Similarity=0.151 Sum_probs=429.5
Q ss_pred CcEEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhc---
Q 008692 9 DSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS--- 85 (557)
Q Consensus 9 ~~~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~--- 85 (557)
++|+||||+|||++|++|||.+|+++++.+++++..+|++|| +||||+ +||++++++++++.+.
T Consensus 3 m~~~lgIDiGtT~~k~~l~d~~g~i~~~~~~~~~~~~~~~g~---~e~d~~----------~~~~~i~~~i~~~~~~~~~ 69 (503)
T 2w40_A 3 MNVILSIDQSTQSTKVFFYDEELNIVHSNNLNHEQKCLKPGW---YEHDPI----------EIMTNLYNLMNEGIKVLKD 69 (503)
T ss_dssp CEEEEEEEECSSEEEEEEEETTCCEEEEEEEECCCBCCSTTC---CEECHH----------HHHHHHHHHHHHHHHHHHH
T ss_pred ccEEEEEEeCCcceEEEEECCCCCEEEEEEEeeeeecCCCCc---EEECHH----------HHHHHHHHHHHHHHHHhhc
Confidence 358999999999999999999999999999999988888875 888888 9999999999987542
Q ss_pred -CCCCCeeEEEEeccccceEEEcCC-CccccccCCCCCCcccccccccCCCCCccccCCCcHHHHHHHHHHhCChHHHHH
Q 008692 86 -LDLSKVTAVSGSGQQHGSVYWKKG-SATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSK 163 (557)
Q Consensus 86 -~~~~~I~aIgis~~~~~~v~vD~~-g~pl~~~~d~~~pl~~~l~~~~~l~~~i~w~D~Ra~~~~~~l~~~~~~~~~~~~ 163 (557)
.+..+|.+||||+|||++++||++ |+| ++|+|+|+|.|+.++++++.+. +..+++++
T Consensus 70 ~~~~~~i~~Igis~~~~~~~~~D~~~G~~--------------------l~~~i~w~D~r~~~~~~~l~~~-~~~~~~~~ 128 (503)
T 2w40_A 70 KYTSVIIKCIGITNQRETVIIWDRITGKP--------------------LYNAIVWLDTRVEELVTEFSAK-YNNNDIQK 128 (503)
T ss_dssp HSSSCEEEEEEEEECSSCEEEEETTTCCB--------------------SSCEECTTCCTTHHHHHHHHHH-SCHHHHHH
T ss_pred CCCccceEEEEEcCCcceEEEEECCCCcC--------------------CccceeecccCcHHHHHHHHhc-cchHHHHH
Confidence 345689999999999999999998 998 4799999999999999999887 44578999
Q ss_pred HhCCCCCCCChHHHHHHHhhhCChhhhcccc----eeechhhHHHHHhC-CcccccccccccccccccCCCCCcHHHHHH
Q 008692 164 LTGSRGYERFTGPQIRKLFQTQPGVYDDTER----ISVVSSFMASLLIG-AYACIDETDAAGMNLMDIRQRVWSKIVLEA 238 (557)
Q Consensus 164 ~tG~~~~~~~~~~kl~Wl~~~~pe~~~~~~~----~l~~~dyl~~~LTG-~~~~~d~s~As~t~l~d~~~~~W~~~ll~~ 238 (557)
+||+++++.++++||+|+++|+||+|+++++ |++++|||.|+||| +++ +|+|+||+|++||+++++|++++|+.
T Consensus 129 ~tG~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~~d~l~~~LTG~~~~-~d~s~As~t~l~d~~~~~W~~~ll~~ 207 (503)
T 2w40_A 129 KTGTYFNTYFSAFKILWLIQNNPEIKQKIDDGTAVIGNINTWLIFNLTKGNCY-TDVTNASRTLLMDINTLQWDEKMCKI 207 (503)
T ss_dssp HHSSCCCSSSHHHHHHHHHHHCHHHHHHHHTTCEEEEEHHHHHHHHHHTSCCE-EEHHHHTTTTCBCTTTCSBCHHHHHH
T ss_pred HhCCCCCcccHHHHHHHHHHhChHHHHHHhcCCeEEECHHHHHHHHHcCCCcc-ccHHHhhhhcCccCCCCccCHHHHHH
Confidence 9999999999999999999999999999999 99999999999999 487 99999999999999999999999999
Q ss_pred cCCchhhhcCCcccCCccccccCHHHHHHcCCCC--CCeEEEcCChhhhhhhccCCCCCCcEEEEecccceeccccC-CC
Q 008692 239 TAPSLEEKLGKLAPAHAVAGCIAPYFVERFHFNK--NCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTVFGITD-DP 315 (557)
Q Consensus 239 ~g~~~~~~LP~i~~~~~~~G~l~~~~a~~~GL~~--g~pV~~G~~D~~aa~~g~g~~~~g~~~~~~GTs~~~~~~~~-~~ 315 (557)
+|.+..++||+|+++++++|+|+++ .+| + ||||++|++|++|+++|+|+.++|++++++|||+++.++++ +|
T Consensus 208 ~gi~~~~~lP~i~~~~~~~G~~~~~---~~g--~~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~ 282 (503)
T 2w40_A 208 FNITNMSVLPEIKSNCSNFGLVKSE---HVP--DYLNIPITGCIGDQQSACIGQAIFDEGEAKCTYGTGVFLLINTGEKV 282 (503)
T ss_dssp TTCCCGGGSCEEECSEEEEEECCCT---TSG--GGTTCEEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTTSC
T ss_pred cCCChHHHCCCccCCcCceeeccHH---HcC--CCCCceEEEECchHHHHHHhCCCCCCCcEEEEechhheeeeecCCcc
Confidence 9942137899999999999999987 578 7 99999999999999999999999999999999999999886 56
Q ss_pred CCCCcc--eeecCccCCC----cEEEEEEeechhhHHHHHHHHhcC-chHHHHHHHHhcCCCCCCCeEeEeccCCCCCCC
Q 008692 316 EPRLEG--HVFPNPVDTK----GYMIMLVYKNASLTREDVRNRCAE-KSWDVFNKYLQQTPPLNGGKMGFYYKEHEILPP 388 (557)
Q Consensus 316 ~~~~~~--~~~~~~~~~g----~~~~~~~~~~~G~~~~W~~~~~~~-~~~~~l~~~a~~~~~g~~gl~~lP~l~Ger~P~ 388 (557)
..++.. ..++|.+ +| .|..+++++++|.+++||++ ++. .+|++|++++++++ +++|++|+|||.|+|+|+
T Consensus 283 ~~~~~~~~~~~~~~~-~g~~~~~~~~~g~~~~~g~~~~w~~~-~~~~~~~~~l~~~a~~~~-~~~gl~~~P~~~G~r~P~ 359 (503)
T 2w40_A 283 VYSTCGLITTICYKF-NDNDKPKYALEGSIGTAGSGVSWLLK-NKLIDDPSEASDIMEKCE-NTTGVIFVPAFSGLYAPR 359 (503)
T ss_dssp CCCSSSCEEEEEECC-STTSCCEEEEEEEESCSHHHHHHHHH-TTSSSCGGGHHHHHHHCC-SCTTCEEECCTTCBCTTT
T ss_pred ccCCCCceeEEEeec-CCCCCceEEEechhhhhHhHHHHHHH-hCCcCCHHHHHHHHhhCC-CCCCEEEecCCCCCCCCC
Confidence 655432 3466654 44 89999999999999999999 753 46889999998886 689999999999999998
Q ss_pred CCCceeeeeecccccccccccccccccCCChhhHHHHHHHHHHHHHHHHHHHcCC--CCCC-CEEEEecCCcchhhHHHH
Q 008692 389 LPVGFHRYILENFEGETLDGVNEVEVKEFDPPSEVRALVEGQFLSMRGHAERFGL--PSPP-RRIIATGGASANQTILSC 465 (557)
Q Consensus 389 ~~~g~~~~~~~~~~~g~~~Gl~~~~~~~~~~~~l~rAvlEgia~~~r~~~~~l~~--~~~~-~~i~~~GGga~s~~w~Qi 465 (557)
|++.+||+|+|++.. |+++|++||++|||||.+|++++.|++ |.++ ++|+++||++||++|+||
T Consensus 360 ---------~d~~arg~~~Gl~~~----~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~i~~~GG~a~s~~~~Q~ 426 (503)
T 2w40_A 360 ---------WRSDARASIYGMTFN----TERSHIVRALLEGIAFQLNEIVDSLTSDMGIEMLHVLRCDGGMTKNKPFMQF 426 (503)
T ss_dssp ---------CBTTCCEEEEEECTT----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCCSCEEEESGGGGCHHHHHH
T ss_pred ---------CCCCCcEEEECCCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccceEEEeCccccCHHHHHH
Confidence 899999999999977 799999999999999999999999964 7778 999999999999999999
Q ss_pred HHHHhCCceEEecCCCchhHHHHHHHHhccccccCCCCCCHHHHHhhhcccccceeecccccCchhhHHHHHHHHHHHHH
Q 008692 466 LASIYGCDIYTVQRPDSASLGAALRAAHGYLCSKKGSFVPISNMYKDKLEKTSLSCKLAVTAGDQQLVSKYAVMMKKRLE 545 (557)
Q Consensus 466 ~Advlg~pv~~~~~~e~~alGAA~lA~~a~~~~~~G~~~~~~~a~~~~~~~~~~~~~P~~~~~~~~~~~~Y~~~y~~y~~ 545 (557)
+||++|+||.++...|++|+|||++|+++ .|.|+|++++.+. +.+..++|+|+++. +.|+++|++|++
T Consensus 427 ~Adv~g~pV~~~~~~e~~alGaA~la~~~-----~G~~~~~~~~~~~-~~~~~~~~~P~~~~------~~y~~~y~~~~~ 494 (503)
T 2w40_A 427 NSDIINTKIEVSKYKEVTSLGAAVLAGLE-----VKIWDSLDSVKSL-LRRSDAVFHSKMDD------KKRKKKTSEWNK 494 (503)
T ss_dssp HHHHHTSCEEEESCSCHHHHHHHHHHHHH-----TTCSSCHHHHHHH-HTCEEEEECCCSCH------HHHHHHHHHHHH
T ss_pred HHHHHCCeEEecCCCcchHHHHHHHHHHH-----hCccCCHHHHHHh-ccCCCcEEccCCCH------HHHHHHHHHHHH
Confidence 99999999999999999999999999999 9999999998764 45667889999853 899999999999
Q ss_pred HHHHHH
Q 008692 546 IENRLV 551 (557)
Q Consensus 546 l~~~l~ 551 (557)
+|++..
T Consensus 495 ~~~~~~ 500 (503)
T 2w40_A 495 AVERTL 500 (503)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 998753
No 15
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=100.00 E-value=5.5e-92 Score=767.98 Aligned_cols=474 Identities=17% Similarity=0.188 Sum_probs=429.7
Q ss_pred cEEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhc--CC
Q 008692 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS--LD 87 (557)
Q Consensus 10 ~~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~--~~ 87 (557)
+|+||||+|||++|++|||.+|+++++.+++++..+|++|| +||||+ +||++++++++++.+. .+
T Consensus 2 ~~~lgiDiGtts~k~~l~d~~G~i~~~~~~~~~~~~p~~g~---~e~d~~----------~~~~~i~~~i~~~~~~~~~~ 68 (504)
T 2d4w_A 2 DYVLAIDQGTTSSRAIVFDHSGEIYSTGQLEHDQIFPRAGW---VEHNPE----------QIWNNVREVVGLALTRGNLT 68 (504)
T ss_dssp CEEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTC---CEECHH----------HHHHHHHHHHHHHHHHTTCC
T ss_pred CEEEEEecCCcceEEEEECCCCCEEEEEEEecceecCCCCc---eeECHH----------HHHHHHHHHHHHHHHHcCCC
Confidence 48999999999999999999999999999999988888765 788888 9999999999987654 44
Q ss_pred CCCeeEEEEeccccceEEEcCC-CccccccCCCCCCcccccccccCCCCCccccCCCcHHHHHHHHHHhCChHHHHHHhC
Q 008692 88 LSKVTAVSGSGQQHGSVYWKKG-SATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTG 166 (557)
Q Consensus 88 ~~~I~aIgis~~~~~~v~vD~~-g~pl~~~~d~~~pl~~~l~~~~~l~~~i~w~D~Ra~~~~~~l~~~~~~~~~~~~~tG 166 (557)
+.+|.+||||+|||++|+||++ |+| ++|+|+|+|.|+.++++++.+..+ .++++++||
T Consensus 69 ~~~i~~Igis~~g~~~v~vD~~~G~~--------------------l~~~i~w~D~R~~~~~~~l~~~~~-~~~~~~~tG 127 (504)
T 2d4w_A 69 HEDIAAVGITNQRETAVVWDKTTGKP--------------------VYNAIVWQDTRTQKIVDELGGDEG-AEKYKSIVG 127 (504)
T ss_dssp GGGEEEEEEEECSSCBEEEETTTCCB--------------------SSCEECTTCCTTHHHHHHHHCSSC-GGGGHHHHS
T ss_pred cccEEEEEEeCCCCeEEEEECCCCCC--------------------ccccceecccChHHHHHHHHhhcc-hHHHHHHhC
Confidence 5689999999999999999997 998 379999999999999999987554 577999999
Q ss_pred CCCCCCChHHHHHHHhhhCChhhhcccc----eeechhhHHHHHhC--C---cccccccccccccccccCCCCCcHHHHH
Q 008692 167 SRGYERFTGPQIRKLFQTQPGVYDDTER----ISVVSSFMASLLIG--A---YACIDETDAAGMNLMDIRQRVWSKIVLE 237 (557)
Q Consensus 167 ~~~~~~~~~~kl~Wl~~~~pe~~~~~~~----~l~~~dyl~~~LTG--~---~~~~d~s~As~t~l~d~~~~~W~~~ll~ 237 (557)
+++++.++++||+|+++|+|++|+++++ |++++|||.|+||| + ++ +|+|+||+|+|||+++++|++++|+
T Consensus 128 ~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~~d~l~~~LTG~~~~~~~~-~d~s~As~t~l~d~~~~~W~~~ll~ 206 (504)
T 2d4w_A 128 LPLATYFSGPKIKWILDNVEGAREKAEKGDLLFGNTDTWVLWNMTGGTEGGVHV-TDVTNASRTMLMDLDTLSWREDIAA 206 (504)
T ss_dssp CCSCTTSHHHHHHHHHHHSTTHHHHHHHTCEEEECHHHHHHHHHTTTTTTCCCE-EEHHHHTTTTCEETTTTEECHHHHH
T ss_pred CCCCchhHHHHHHHHHHcChhHHHHHhcCCeEEecHHHHHHHHhcCCCcCCcee-eehhhhhhhcCccCCCCccCHHHHH
Confidence 9999999999999999999999999998 99999999999999 7 77 9999999999999999999999999
Q ss_pred HcCCchhhhcCCcccCCccccccCHHHHHHcCCCCCCeEEEcCChhhhhhhccCCCCCCcEEEEecccceeccccC-CCC
Q 008692 238 ATAPSLEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTVFGITD-DPE 316 (557)
Q Consensus 238 ~~g~~~~~~LP~i~~~~~~~G~l~~~~a~~~GL~~g~pV~~G~~D~~aa~~g~g~~~~g~~~~~~GTs~~~~~~~~-~~~ 316 (557)
.+|.+ .++||+|+++++++|+++++ +.+| + |||++|++|++|+++|+|++++|++++++|||+++.+.++ +|.
T Consensus 207 ~~gi~-~~~lP~i~~~~~~~G~~~~~--~~~G--~-~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~ 280 (504)
T 2d4w_A 207 DMGIP-LSMLPDIRSSSEVYGHGRPR--GLVP--G-VPIAGILGDQQAATFGQACFEVGQAKNTYGTGNFLLLNTGTEKV 280 (504)
T ss_dssp HTTCC-GGGSCEEECSEEEEEECCTT--SSST--T-CEEEEEEEHHHHHHHHTTCCSTTEEEEEESSSEEEEEECTTSCC
T ss_pred HhCCC-HHHCCCccCCccceeccchH--HhCC--C-CeEEEECCcHHHHHhhCCCCCCCcEEEEcchhheeeeecCCccc
Confidence 99933 78999999999999999985 3688 6 9999999999999999999999999999999999999886 566
Q ss_pred CCCcc--eeecCccCCC---cEEEEEEeechhhHHHHHHHHhcC-chHHHHHHHHhcCCCCCCCeEeEeccCCCCCCCCC
Q 008692 317 PRLEG--HVFPNPVDTK---GYMIMLVYKNASLTREDVRNRCAE-KSWDVFNKYLQQTPPLNGGKMGFYYKEHEILPPLP 390 (557)
Q Consensus 317 ~~~~~--~~~~~~~~~g---~~~~~~~~~~~G~~~~W~~~~~~~-~~~~~l~~~a~~~~~g~~gl~~lP~l~Ger~P~~~ 390 (557)
.++.+ ..++|.+ +| .|..+++++++|.+++|+++.++. .+|++|++++++++ +++|++|+|||.|+|+|+
T Consensus 281 ~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~-~~~gl~~~P~~~G~r~P~-- 356 (504)
T 2d4w_A 281 MSKNGLLTTVCYKI-GDAPAVYALEGSIAVTGSLVQWLRDNLGMFEDAPDVEWLAGKVQ-DNGGAYFVPAFSGLFAPY-- 356 (504)
T ss_dssp CCSSSCEEEEEECC-TTSCCEEEEEEEESCSHHHHHHHHHTTCTTTTCSCTHHHHTTSS-SCTTCEEECTTCCCSTTT--
T ss_pred cCCCCcEEEEEEEc-CCCCceEEEcchhhhHHHHHHHHHHHhCCCCCHHHHHHHHhhCC-CCCCEEEecCCCCCCCCC--
Confidence 65433 3456653 45 899999999999999999998753 46788999998876 689999999999999998
Q ss_pred CceeeeeecccccccccccccccccCCChhhHHHHHHHHHHHHHHHHHHHcCC--CCCCCEEEEecCCcchhhHHHHHHH
Q 008692 391 VGFHRYILENFEGETLDGVNEVEVKEFDPPSEVRALVEGQFLSMRGHAERFGL--PSPPRRIIATGGASANQTILSCLAS 468 (557)
Q Consensus 391 ~g~~~~~~~~~~~g~~~Gl~~~~~~~~~~~~l~rAvlEgia~~~r~~~~~l~~--~~~~~~i~~~GGga~s~~w~Qi~Ad 468 (557)
+++.+||+|+|++.. |+++||+||++||+||.+|++++.|++ |.++++|+++||++||++|+||+||
T Consensus 357 -------~d~~arg~~~Gl~~~----~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~a~s~~~~Qi~Ad 425 (504)
T 2d4w_A 357 -------WRPDARGALVGLTRY----VNRNHIARAALEATAFQSREVVDAMNADSGVDLTELRVDGGMVANELLMQFQAD 425 (504)
T ss_dssp -------CCCCSCEEEEEECSS----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCEEEEESGGGGCHHHHHHHHH
T ss_pred -------CCCCCCEEEEeCCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEEeCCcccCHHHHHHHHH
Confidence 899999999999976 799999999999999999999999964 7788999999999999999999999
Q ss_pred HhCCceEEecCCCchhHHHHHHHHhccccccCCCCCCHHHHHhhhcccccceeecccccCchhhHHHHHHHHHHHHHHHH
Q 008692 469 IYGCDIYTVQRPDSASLGAALRAAHGYLCSKKGSFVPISNMYKDKLEKTSLSCKLAVTAGDQQLVSKYAVMMKKRLEIEN 548 (557)
Q Consensus 469 vlg~pv~~~~~~e~~alGAA~lA~~a~~~~~~G~~~~~~~a~~~~~~~~~~~~~P~~~~~~~~~~~~Y~~~y~~y~~l~~ 548 (557)
++|+||.++...|++|+|||++|+++ .|.|+|++++.+ +.+..++|+|+++. +.|+++|++|+++|+
T Consensus 426 v~g~pV~~~~~~e~~alGaA~lA~~~-----~G~~~~~~~~~~--~~~~~~~~~P~~~~------~~y~~~y~~~~~~~~ 492 (504)
T 2d4w_A 426 QLGVDVVRPKVAETTALGAAYAAGIA-----VGFWKGEQDVID--NWAEDKRWSPSMES------GERERLYRNWKKAVT 492 (504)
T ss_dssp HHTSCEEEESCSCHHHHHHHHHHHHH-----HTSSCSHHHHHH--HCCEEEEECCCSCH------HHHHHHHHHHHHHHH
T ss_pred HhCCeEEeCCCCcchHHHHHHHHHhh-----cCccCCHHHHHh--hcCCCeEEccCCCH------HHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 999999999864 34567889999854 889999999999999
Q ss_pred HHHH
Q 008692 549 RLVE 552 (557)
Q Consensus 549 ~l~~ 552 (557)
+++.
T Consensus 493 ~~~~ 496 (504)
T 2d4w_A 493 KTME 496 (504)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 9875
No 16
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=100.00 E-value=2.3e-91 Score=761.75 Aligned_cols=472 Identities=18% Similarity=0.202 Sum_probs=427.1
Q ss_pred cEEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhc--CC
Q 008692 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS--LD 87 (557)
Q Consensus 10 ~~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~--~~ 87 (557)
+|+||||+|||++|++|||.+|+++++.+++++..+|++|| +||||+ +||++++++++++.+. .+
T Consensus 2 ~~~lgiDiGtT~~k~~l~d~~g~i~~~~~~~~~~~~p~~g~---~e~d~~----------~~~~~i~~~i~~~~~~~~~~ 68 (495)
T 2dpn_A 2 AFLLALDQGTTSSRAILFTLEGRPVAVAKREFRQLYPKPGW---VEHDPL----------EIWETTLWAAREVLRRAGAE 68 (495)
T ss_dssp -CEEEEEECSSEEEEEEECTTSCEEEEEEEECCEECSSTTC---CEECHH----------HHHHHHHHHHHHHHHHTTCC
T ss_pred cEEEEEeeCCcceEEEEECCCCCEEEEEEEeeceecCCCCc---EeeCHH----------HHHHHHHHHHHHHHHhcCCC
Confidence 48999999999999999999999999999999987888765 788888 9999999999987654 44
Q ss_pred CCCeeEEEEeccccceEEEcCC-CccccccCCCCCCcccccccccCCCCCccccCCCcHHHHHHHHHHhCChHHHHHHhC
Q 008692 88 LSKVTAVSGSGQQHGSVYWKKG-SATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTG 166 (557)
Q Consensus 88 ~~~I~aIgis~~~~~~v~vD~~-g~pl~~~~d~~~pl~~~l~~~~~l~~~i~w~D~Ra~~~~~~l~~~~~~~~~~~~~tG 166 (557)
..+|.+||||+|+|++++||++ |+| ++|+|+|+|.|+.++++++.+. +..+.++++||
T Consensus 69 ~~~i~~Igis~~~~~~~~vD~~~G~~--------------------l~~~i~w~D~R~~~~~~~l~~~-~~~~~~~~~tG 127 (495)
T 2dpn_A 69 AGEVLALGITNQRETTLLWDRKTGKP--------------------LHNAIVWQDRRTTPLCEALRAK-GLEPLFRERTG 127 (495)
T ss_dssp GGGCCEEEEEECSSCBEEEETTTCCB--------------------SSCEECTTCCTTHHHHHHHHHT-TCHHHHHHHTS
T ss_pred cccEEEEEEeCCCccEEEEECCCCcC--------------------CccceeecccChHHHHHHHHhc-cchhHHHHHhC
Confidence 5789999999999999999997 998 3799999999999999999876 34578999999
Q ss_pred CCCCCCChHHHHHHHhhhCChhhhcccc----eeechhhHHHHHhC--CcccccccccccccccccCCCCCcHHHHHHcC
Q 008692 167 SRGYERFTGPQIRKLFQTQPGVYDDTER----ISVVSSFMASLLIG--AYACIDETDAAGMNLMDIRQRVWSKIVLEATA 240 (557)
Q Consensus 167 ~~~~~~~~~~kl~Wl~~~~pe~~~~~~~----~l~~~dyl~~~LTG--~~~~~d~s~As~t~l~d~~~~~W~~~ll~~~g 240 (557)
+++++.++++||+|+++|+|++|+|+++ |++++|||.|+||| +++ +|+|+||+|+|||+++++|++++|+.+|
T Consensus 128 ~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~~d~l~~~LTG~~~~~-~d~s~As~t~l~d~~~~~W~~~ll~~~g 206 (495)
T 2dpn_A 128 LLFDPYFSGTKLVWLLENVPGLKARAEGGGVAFGTVDTWLIWNLTGGKVHA-TDPTNASRTLLFNLHTLAWDPELLEALG 206 (495)
T ss_dssp CCSCTTSHHHHHHHHHHHSSSHHHHHHHTCEEEECHHHHHHHHHTTTSCCE-ECHHHHTTSSSEETTTTEECHHHHHHTT
T ss_pred CCCCchhHHHHHHHHHHcCHHHHHHHhcCCcEEECHHHHHHHHhcCCCeEE-EehHHhHhhcCccCccCCcCHHHHHHcC
Confidence 9999999999999999999999999998 99999999999999 787 9999999999999999999999999999
Q ss_pred CchhhhcCCcccCCccccccCHHHHHHcCCCCCCeEEEcCChhhhhhhccCCCCCCcEEEEecccceeccccC-CCCCCC
Q 008692 241 PSLEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTVFGITD-DPEPRL 319 (557)
Q Consensus 241 ~~~~~~LP~i~~~~~~~G~l~~~~a~~~GL~~g~pV~~G~~D~~aa~~g~g~~~~g~~~~~~GTs~~~~~~~~-~~~~~~ 319 (557)
.+ .++||+|+++++++|+++++ .+| +||||++|++|++|+++|+|+.++|++++++|||+++.+.++ +|..++
T Consensus 207 i~-~~~lP~i~~~~~~~G~~~~~---~~G--~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~ 280 (495)
T 2dpn_A 207 IP-AALLPEVRPSDGDFGETLPE---LLG--APVPIRGVLGDQQAALFGQAALGGGEGKCTYGTGAFLLLNTGKRPVLSE 280 (495)
T ss_dssp CC-STTCCEECCTTSCCCBCCHH---HHS--SCCBEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTTSCCCCS
T ss_pred CC-HHHCCCccCCCCeeEeccHH---HcC--CCCeEEEECcHHHHHHHhCCCCCCCcEEEEccHhhhhhhhcCCccccCC
Confidence 33 68999999999999999987 588 899999999999999999999999999999999999999886 466554
Q ss_pred cc--eeecCccCCC--cEEEEEEeechhhHHHHHHHHhcC-chHHHHHHHHhcCCCCCCCeEeEeccCCCCCCCCCCcee
Q 008692 320 EG--HVFPNPVDTK--GYMIMLVYKNASLTREDVRNRCAE-KSWDVFNKYLQQTPPLNGGKMGFYYKEHEILPPLPVGFH 394 (557)
Q Consensus 320 ~~--~~~~~~~~~g--~~~~~~~~~~~G~~~~W~~~~~~~-~~~~~l~~~a~~~~~g~~gl~~lP~l~Ger~P~~~~g~~ 394 (557)
.+ ..++|.+ ++ .|..+++++++|.+++|+++ ++. .+|++|++++++++ +++|++|+|||.|+|+|+
T Consensus 281 ~~~~~~~~~~~-~~~~~~~~~g~~~~~g~~~~w~~~-~~~~~~~~~l~~~a~~~~-~~~gl~~~P~~~G~r~P~------ 351 (495)
T 2dpn_A 281 KGLLATVAWSL-GGRATYALEGSLFVAGAAVGWLKE-VGLIRESAEVEALAASVE-DTGDVYFVPAFTGLGAPY------ 351 (495)
T ss_dssp SSCEEEEEEEE-TTEEEEEEEEEESCSHHHHHHHHH-TTSSSSTTTHHHHHHTCS-CCSSCEEECCTTCBCTTT------
T ss_pred CCceEEEEEEc-CCCCEEEEechHHhHHHHHHHHHH-cCCccCHHHHHHHHhhCC-CCCcEEEecCCCCCCCCC------
Confidence 32 3456543 44 79999999999999999999 753 46888999998886 689999999999999998
Q ss_pred eeeecccccccccccccccccCCChhhHHHHHHHHHHHHHHHHHHHcCC--CCCCCEEEEecCCcchhhHHHHHHHHhCC
Q 008692 395 RYILENFEGETLDGVNEVEVKEFDPPSEVRALVEGQFLSMRGHAERFGL--PSPPRRIIATGGASANQTILSCLASIYGC 472 (557)
Q Consensus 395 ~~~~~~~~~g~~~Gl~~~~~~~~~~~~l~rAvlEgia~~~r~~~~~l~~--~~~~~~i~~~GGga~s~~w~Qi~Advlg~ 472 (557)
+++.+||+|+|++.. |+++||+||++||+||.+|++++.|++ |.++++|+++||++||++|+||+||++|+
T Consensus 352 ---~d~~arg~~~Gl~~~----~~~~~~~rAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~a~n~~~~q~~Adv~g~ 424 (495)
T 2dpn_A 352 ---WDPYARGTLLGLTRG----TSRAHLARAALEGVAFQVRDVVLAMEEEAGVRLKVLKADGGMAQNRLFLKIQADLLGV 424 (495)
T ss_dssp ---CBTTCCEEEEEECTT----CCHHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCCCEEEESGGGGCHHHHHHHHHHHTS
T ss_pred ---CCCCCceEEEecCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecccccCHHHHHHHHHHhCC
Confidence 899999999999976 799999999999999999999999964 67889999999999999999999999999
Q ss_pred ceEEecCCCchhHHHHHHHHhccccccCCCCCCHHHHHhhhcccccceeecccccCchhhHHHHHHHHHHHHHHHHHHHH
Q 008692 473 DIYTVQRPDSASLGAALRAAHGYLCSKKGSFVPISNMYKDKLEKTSLSCKLAVTAGDQQLVSKYAVMMKKRLEIENRLVE 552 (557)
Q Consensus 473 pv~~~~~~e~~alGAA~lA~~a~~~~~~G~~~~~~~a~~~~~~~~~~~~~P~~~~~~~~~~~~Y~~~y~~y~~l~~~l~~ 552 (557)
||.++...|++|+|||++|+++ .|.| |++++.+ +.+..++|+|+++. +.|+++|++|+++|+++++
T Consensus 425 pV~~~~~~e~~alGaA~la~~a-----~G~~-~~~~~~~--~~~~~~~~~P~~~~------~~y~~~~~~~~~~~~~~~~ 490 (495)
T 2dpn_A 425 PVAVPEVTETTALGAALMAGVG-----AGAL-SPEDVAG--RFREAERFLPTMPE------GRREALYRRWREAVERAKG 490 (495)
T ss_dssp CEEEESCSCHHHHHHHHHHHHH-----HTSC-CHHHHHH--HCCEEEEECCCSCH------HHHHHHHHHHHHHHHHHSS
T ss_pred eeEecCCcccHHHHHHHHHHhh-----cCcC-CHHHHHH--hcCCCeEEccCCCH------HHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999 9999 9998864 34567889999854 7899999999999998764
No 17
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=100.00 E-value=1.2e-91 Score=765.26 Aligned_cols=459 Identities=23% Similarity=0.268 Sum_probs=412.8
Q ss_pred CcEEEEEEccCCceEEEEEc-CCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhcCC
Q 008692 9 DSLFLGFDSSTQSLKATVLD-SNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLD 87 (557)
Q Consensus 9 ~~~~lgIDiGTts~Ka~l~d-~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~~~ 87 (557)
++|+||||+|||++|++||| .+|+++++.+++++ + ++||||+ +||++++++++++. .
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~~~G~i~~~~~~~~~------g---~~e~d~~----------~~~~~i~~~l~~~~--~- 61 (515)
T 3i8b_A 4 RTLVAGVDTSTQSCKVRVTDAETGELVRFGQAKHP------N---GTSVDPS----------YWWSAFQEAAEQAG--G- 61 (515)
T ss_dssp SCEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------S---SSEECTH----------HHHHHHHHHHHHTT--C-
T ss_pred CcEEEEEEeccccEEEEEEECCCCeEEEEEEEeCC------C---CceECHH----------HHHHHHHHHHHhcC--C-
Confidence 46999999999999999999 89999999998873 3 4899999 99999998887643 2
Q ss_pred CCCeeEEEEeccccceEEEcCCCccccccCCCCCCcccccccccCCCCCccccCCCcHHHHHHHHHHhCC-h--------
Q 008692 88 LSKVTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGG-A-------- 158 (557)
Q Consensus 88 ~~~I~aIgis~~~~~~v~vD~~g~pl~~~~d~~~pl~~~l~~~~~l~~~i~w~D~Ra~~~~~~l~~~~~~-~-------- 158 (557)
..+|.+||||+|++++|+||++|+| ++|+|+|+|+|+.++++++.+.++. .
T Consensus 62 ~~~I~~Igis~q~~~~v~~D~~G~p--------------------l~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~~~~~ 121 (515)
T 3i8b_A 62 LDDVSALAVGGQQHGMVILDNQGNV--------------------IRDAMLWNDTSSAPQAAALIEKLGAAPAQDGEPED 121 (515)
T ss_dssp STTEEEEEEEECSSCBEEECTTSCB--------------------CSCEECTTCCTTHHHHHHHHHHHHCSCCCTTCCSS
T ss_pred ccCceEEEEeCCcceEEEECCCCCC--------------------cCCcceecCCCHHHHHHHHHHhcCccccccccccc
Confidence 4789999999999999999999998 4899999999999999999988753 2
Q ss_pred ------HHHHHHhCCCCCCCChHHHHHHHhhhCChhhhcccceeechhhHHHHHhCC-------------cccccccccc
Q 008692 159 ------LELSKLTGSRGYERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGA-------------YACIDETDAA 219 (557)
Q Consensus 159 ------~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~~~~~l~~~dyl~~~LTG~-------------~~~~d~s~As 219 (557)
++++++||+++++.++++||+|+++|+||+|+++++|++++|||.|+|||+ ++ +|+|+||
T Consensus 122 ~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~Pe~~~~~~~~l~~~dyl~~~LTG~~~~~~~~~~~~~~~~-td~s~As 200 (515)
T 3i8b_A 122 PIARGKQRWVKAVGSSPVASYTLTKVAWVAENEPENVKKIAAICLPHDWLSWRIAGYGPVAEGEDAHLEALF-TDRSDAS 200 (515)
T ss_dssp HHHHHHHHHHHHHSSCCCTTSHHHHHHHHHHHCHHHHTTCSEEECHHHHHHHHHTTCCCCCTTSCCCGGGCE-EEHHHHT
T ss_pred ccchhHHHHHHHHCCCCCchhHHHHHHHHHHcChHHHHHHheecCHHHHHHHHhcCCCccccccccccccee-ecHHHhh
Confidence 789999999999999999999999999999999999999999999999998 45 9999999
Q ss_pred cccccccCCCCCcHHHHHHc-CCc-h---------hhhcCCcccCCccccccCHHHHHHcCCCCCCeEEEcCChhhhhhh
Q 008692 220 GMNLMDIRQRVWSKIVLEAT-APS-L---------EEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLA 288 (557)
Q Consensus 220 ~t~l~d~~~~~W~~~ll~~~-g~~-~---------~~~LP~i~~~~~~~G~l~~~~a~~~GL~~g~pV~~G~~D~~aa~~ 288 (557)
+|+|||+++++|++++|+.+ |.+ + .++||+|+++++++|+|++++|+++||++||||++|++|++|+++
T Consensus 201 ~t~l~d~~~~~W~~~ll~~~~gi~~~~~~~~~~~~~~~LP~i~~~~~~~G~v~~~~A~~~Gl~~g~pV~~g~~D~~aa~l 280 (515)
T 3i8b_A 201 GTIYYDAASNEYRRDLIAMVLEAAEGAKAAQSHAEAIVLPTVLGPRDAAPVKADPAIAGKNVEGGCLLAPGGGDNAMASL 280 (515)
T ss_dssp TSSSEETTTTEECHHHHHHHHHHHHCHHHHHHHHHHSBCCEEECTTCCCSSCCCTTTTTTTSTTCCEECCCEEHHHHHHH
T ss_pred cccCeeCCcCccCHHHHHhhcCCCcccccccccchHHHCCCCcCCcCcccCcCHHHHHHhCCCCCCeEEEECchHHHHHh
Confidence 99999999999999999998 841 1 368999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCcEEEEecccceeccccCCCCCCCcce--eecCccCCCcEEEEEEeechhhHHHHHHHHhcCchHHHHHHHHh
Q 008692 289 GLTLSTSGDLAISLGTSDTVFGITDDPEPRLEGH--VFPNPVDTKGYMIMLVYKNASLTREDVRNRCAEKSWDVFNKYLQ 366 (557)
Q Consensus 289 g~g~~~~g~~~~~~GTs~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~G~~~~W~~~~~~~~~~~~l~~~a~ 366 (557)
|+| +++|++++++|||+++.+++++|..++.+. .+++ .+|.|+.+++++++|.+++|+++.++. +|++|+++++
T Consensus 281 G~g-~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~gg~~l~w~~~~~~~-~~~~l~~~a~ 356 (515)
T 3i8b_A 281 GLG-MAVGDVSISLGTSGVAAAISENPTYDLTGAVSGFAD--CTGHYLPLACTINGSRILDAGRAALGV-DYDELAKLAF 356 (515)
T ss_dssp HTT-CCTTEEEEEESSSEEEEECBSSCCCCTTSCSEEEEC--SSSSEEEEEEESCSTHHHHHHHHHHTC-CHHHHHHHHH
T ss_pred hCC-CCCCcEEEEechhhhhhcccCccccCCCCcEEeeec--CCCCEEEeeecccHHHHHHHHHHHhCC-CHHHHHHHHH
Confidence 999 899999999999999999999888776543 3444 378899999999999999999998864 7999999999
Q ss_pred cCCCCCCCeEeEeccCCCCCCCCCCceeeeeecccccccccccccccccCC-ChhhHHHHHHHHHHHHHHHHHHHcCC-C
Q 008692 367 QTPPLNGGKMGFYYKEHEILPPLPVGFHRYILENFEGETLDGVNEVEVKEF-DPPSEVRALVEGQFLSMRGHAERFGL-P 444 (557)
Q Consensus 367 ~~~~g~~gl~~lP~l~Ger~P~~~~g~~~~~~~~~~~g~~~Gl~~~~~~~~-~~~~l~rAvlEgia~~~r~~~~~l~~-~ 444 (557)
+++||++|++|+|||.|||+|. + +.+||+|+|++.. | +++||+||++||+||.+|++++.|++ |
T Consensus 357 ~~~~g~~gl~~lP~~~Ger~P~---------~-~~arg~~~Gl~~~----~~~~~~l~RAvlEgia~~~r~~l~~l~~~g 422 (515)
T 3i8b_A 357 ASKPGANGITLVPYFDGERTPN---------R-PNATATFSGMTLA----NTTRENLARAFVEGLLCSQRDCLELIRSLG 422 (515)
T ss_dssp HSCTTGGGCEEECCTTCBTTTT---------B-TTCCCEEESCCTT----TCSHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hCCCCCCCeEEecCCCCCcCCC---------C-cCcceEEecCCCC----CCCHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999996 5 8899999999987 7 99999999999999999999999975 7
Q ss_pred CCCCEEEEecCCcchhhHHHHHHHHhCCceEEecCCCchhHHHHHHHHhccccccCCCCCCHHHHHhhhcccccceeecc
Q 008692 445 SPPRRIIATGGASANQTILSCLASIYGCDIYTVQRPDSASLGAALRAAHGYLCSKKGSFVPISNMYKDKLEKTSLSCKLA 524 (557)
Q Consensus 445 ~~~~~i~~~GGga~s~~w~Qi~Advlg~pv~~~~~~e~~alGAA~lA~~a~~~~~~G~~~~~~~a~~~~~~~~~~~~~P~ 524 (557)
.++++|+++||++||++|+||+||+||+||+++...|++|+|||++|+++ .|.++++++.. .....+|+|+
T Consensus 423 ~~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~~~e~~alGAA~lA~~a-----~G~~~~~~~~~----~~~~~~~~~~ 493 (515)
T 3i8b_A 423 ASITRILLIGGGAKSEAIRTLAPSILGMDVTRPATDEYVAIGAARQAAWV-----LSGETEPPAWQ----LTIDGVETGE 493 (515)
T ss_dssp CCCCEEEEESGGGGCHHHHHHHHHHHTSCEEEECCCCHHHHHHHHHHHHH-----HHCCSSCCCCC----CCEEEEECCC
T ss_pred CCCCEEEEECchhcCHHHHHHHHHHhCCceEecCCcccHHHHHHHHHHHH-----cCCCCChhHhh----hhccccCCCC
Confidence 88999999999999999999999999999999999999999999999999 89888776421 1235577887
Q ss_pred cccCchhhHHHHHHHH
Q 008692 525 VTAGDQQLVSKYAVMM 540 (557)
Q Consensus 525 ~~~~~~~~~~~Y~~~y 540 (557)
++. +..+.|+++|
T Consensus 494 ~~~---~~~~~~~~~~ 506 (515)
T 3i8b_A 494 PTE---AVYEAYAKAR 506 (515)
T ss_dssp CCH---HHHHHHHHHH
T ss_pred ccH---HHHHHHHHHh
Confidence 743 3455565555
No 18
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=6.9e-84 Score=697.28 Aligned_cols=450 Identities=15% Similarity=0.075 Sum_probs=373.2
Q ss_pred CcEEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhcCCC
Q 008692 9 DSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDL 88 (557)
Q Consensus 9 ~~~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~~~~ 88 (557)
++|+||||+||||+|++|||.+|+++++.+.+++. +|.+|| +||||+ +||++++++++++. .
T Consensus 5 m~~~lgIDiGTts~Ka~l~d~~G~i~~~~~~~~~~-~~~~g~---~eqdp~----------~~~~~~~~~i~~~~-~--- 66 (482)
T 3h6e_A 5 TGATIVIDLGKTLSKVSLWDLDGRMLDRQVRPSIP-LEIDGI---RRLDAP----------DTGRWLLDVLSRYA-D--- 66 (482)
T ss_dssp ---CEEEEECSSEEEEEEECTTSCEEEEEEEECCC-EESSSC---EECCHH----------HHHHHHHHHHHHTT-T---
T ss_pred hceEEEEEcCCCCeEEEEEECCCcEEEEEEecCCc-ccCCCc---eeECHH----------HHHHHHHHHHHHHH-h---
Confidence 56999999999999999999999999999999985 566654 788887 99999999998875 2
Q ss_pred CCeeEEEEeccccceEEEcCCCccccccCCCCCCcccccccccCCCCCccccCCCcHHHHHHHHHHhCChHHHHHHhCCC
Q 008692 89 SKVTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTGSR 168 (557)
Q Consensus 89 ~~I~aIgis~~~~~~v~vD~~g~pl~~~~d~~~pl~~~l~~~~~l~~~i~w~D~Ra~~~~~~l~~~~~~~~~~~~~tG~~ 168 (557)
.+|.+||||+|++++|+|| +|+| |+|+|+|+|+|+.++++++.+..+ .+++||++
T Consensus 67 ~~I~aIgis~~~~~~v~~D-~G~p--------------------l~~ai~w~D~R~~~~~~~l~~~~~----~~~~tG~~ 121 (482)
T 3h6e_A 67 HPVTTIVPVGHGAGIAALT-DGRL--------------------AFPPLDYEQSIPEAVMADYRSQRD----PFARTGSP 121 (482)
T ss_dssp SCCCEEEEEECSSCEEEEE-TTEE--------------------CSCCBCTTSCCCHHHHHHHHTTCC----CHHHHCCC
T ss_pred cCCCEEEEecCcCCEEEEC-CCCE--------------------eccccccCCcccHHHHHHHHhhCh----HHHHhCCC
Confidence 5799999999999999999 9998 489999999999999999987542 28899999
Q ss_pred CCCC--ChHHHHHHHhhhCChhhhcccceeechhhHHHHHhCCcccccccc-cccccccccCCCCCcHHHHHHcCCchhh
Q 008692 169 GYER--FTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETD-AAGMNLMDIRQRVWSKIVLEATAPSLEE 245 (557)
Q Consensus 169 ~~~~--~~~~kl~Wl~~~~pe~~~~~~~~l~~~dyl~~~LTG~~~~~d~s~-As~t~l~d~~~~~W~~~ll~~~g~~~~~ 245 (557)
++++ ++++||+|+++|+||+|+|++ |++++|||.|+|||+++ +|+|+ ||+|+|||+++++|+ ++|+.+|. ++
T Consensus 122 ~~~~~~~~~~kl~Wl~~~~Pe~~~~~~-~l~~~dyl~~~LTG~~~-td~s~~As~t~l~d~~~~~W~-~ll~~~gi--~~ 196 (482)
T 3h6e_A 122 ALPDGLNIGSQLWWLDQLHPDVMANAT-LLPWAQYWAWFLTGRAV-SEVTSLGCHSDLWDPQDGDFS-PMAKRLGW--AA 196 (482)
T ss_dssp CCSTTSSHHHHHHHHHHHSHHHHHSCE-EEEHHHHHHHHTTSCCC-EEHHHHTTTCSSEETTTTEEC-HHHHHTTC--GG
T ss_pred CCCCchhHHHHHHHHHHcCchhhhcCE-EEccHHHHHHHHhCCee-eecchhhhccCCccCCcCcHH-HHHHHcCC--HH
Confidence 9998 899999999999999999999 99999999999999997 99998 899999999999999 59999996 48
Q ss_pred hcCCcccCCccccccCHHHHHHcCCCCCCeEEEcCChhhhhhhc---cCCCCCCc-EEEEecccceeccccC---C-CCC
Q 008692 246 KLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAG---LTLSTSGD-LAISLGTSDTVFGITD---D-PEP 317 (557)
Q Consensus 246 ~LP~i~~~~~~~G~l~~~~a~~~GL~~g~pV~~G~~D~~aa~~g---~g~~~~g~-~~~~~GTs~~~~~~~~---~-~~~ 317 (557)
+||+|+++++++|+|++++|+++||++|+||++|++|++|+++| +|++++|+ +++++|||.++..+.+ + |..
T Consensus 197 ~LP~v~~~~~~~G~l~~~~A~~~GL~~g~pV~~g~~D~~aa~lG~~g~g~~~~g~~~~~s~GT~~~~~~~~~~~~~~~~~ 276 (482)
T 3h6e_A 197 RFAPIVRAGDTVGALLPAIAERTGLSPDVQVLAGLHDSNAALLAARGFAEIADNEATVLSTGTWFIAMRLPATPVDTATL 276 (482)
T ss_dssp GBCCEECTTSEEEECCHHHHHHHTCCTTCEEECCEEHHHHHHHHHTTSTTTTTSSEEEEECSSSEEEEEECSSCCCGGGC
T ss_pred hCCCCcCCCceeeeeCHHHHHHhCCCCCCEEEEeCcHHHHHHhhhhccCCcCCCCEEEEECCceeEEEEecCccCCcccc
Confidence 99999999999999999999999999999999999999999999 99999997 5899999988655555 3 334
Q ss_pred CCcceeecCccCCCcEEEEEEeechhhHHHHHHHHhc--Cc-hHHHHHHHHhcCCCCCCCeEeEeccCCCCCCCCCCcee
Q 008692 318 RLEGHVFPNPVDTKGYMIMLVYKNASLTREDVRNRCA--EK-SWDVFNKYLQQTPPLNGGKMGFYYKEHEILPPLPVGFH 394 (557)
Q Consensus 318 ~~~~~~~~~~~~~g~~~~~~~~~~~G~~~~W~~~~~~--~~-~~~~l~~~a~~~~~g~~gl~~lP~l~Ger~P~~~~g~~ 394 (557)
++....+++. ....|.+.+...++|..++|+++... .+ .++..+.+++..++|++|++|+|||+|||+|+
T Consensus 277 ~~~~~~~~~~-~~~~~~~~g~~~~~G~~~~w~~~~~~~~~~~~~~~~~~~a~~~~~g~~Gl~flP~l~Ger~P~------ 349 (482)
T 3h6e_A 277 PEARDCLVNV-DVHGRPVPSARFMGGREIETLIEIDTRRVDIKPDQPALLAAVPEVLRHGRMILPTLMRGFGPY------ 349 (482)
T ss_dssp CGGGTEEEEE-CTTSCEEEEEEECHHHHHHHHHCSGGGCTTCGGGHHHHHHTHHHHHHTTCEEESCSSTTCSSC------
T ss_pred chhhceeecc-ccccccccchhhhhHHHHHHHHHhcccccccccchhhHHHhccccCCCCeEEecCCCCCCCCC------
Confidence 4432223221 12335667777899999999975432 10 12233334444568999999999999999997
Q ss_pred eeeecccccccccccccccccCCChhhHHHHHHHH--HHHHHHHHHHHcCCCCCCCEEEEecCCcchhhHHHHHHHH-hC
Q 008692 395 RYILENFEGETLDGVNEVEVKEFDPPSEVRALVEG--QFLSMRGHAERFGLPSPPRRIIATGGASANQTILSCLASI-YG 471 (557)
Q Consensus 395 ~~~~~~~~~g~~~Gl~~~~~~~~~~~~l~rAvlEg--ia~~~r~~~~~l~~~~~~~~i~~~GGga~s~~w~Qi~Adv-lg 471 (557)
|++ ||+|+||+ . +|++||++|+ |||++|++++.|++ .++|+++||++||++|+||+||| ||
T Consensus 350 ---~d~--rG~~~Gl~-------~-~~l~RA~lE~~Gia~~~r~~l~~~~~---~~~i~~~GG~a~s~~w~Qi~ADv~~g 413 (482)
T 3h6e_A 350 ---PHG--RFAWINRP-------E-DWFERRAAACLYAALVADTALDLIGS---TGRILVEGRFAEADVFVRALASLRPD 413 (482)
T ss_dssp ---TTC--CCEEESCC-------S-SHHHHHHHHHHHHHHHHHHHHHHTTC---CSEEEEESGGGGCHHHHHHHHHHSTT
T ss_pred ---CCC--ceEEeCCC-------H-HHHHHHHHHHHhHHHHHHHHHHHhcC---CCeEEEeCCcccCHHHHHHHhhhcCC
Confidence 665 99999995 2 8999999995 99999999999974 37999999999999999999999 99
Q ss_pred CceEEecCCCchhHHHHHHHHhccccccCCCCCCHHHHHhhhcccccceeecccccCchhhHHHHHHHHHHHHHHHHHH
Q 008692 472 CDIYTVQRPDSASLGAALRAAHGYLCSKKGSFVPISNMYKDKLEKTSLSCKLAVTAGDQQLVSKYAVMMKKRLEIENRL 550 (557)
Q Consensus 472 ~pv~~~~~~e~~alGAA~lA~~a~~~~~~G~~~~~~~a~~~~~~~~~~~~~P~~~~~~~~~~~~Y~~~y~~y~~l~~~l 550 (557)
+||++++..|++|+|||++|+++. .+ .....+.|.... +....+++++++|++..+.-
T Consensus 414 ~pV~~~~~~e~~alGAA~lA~~a~----~~--------------~~~~~~~~~~~~---~~~~~~~~~~~~w~~~~~~~ 471 (482)
T 3h6e_A 414 CAVYTANAHNDVSFGALRLIDPGL----RP--------------QGELVRIEPLDT---GSWADLDTYRNRWQAEVEAA 471 (482)
T ss_dssp SEEEEESSCCCTTGGGHHHHCTTC----CC--------------SSCEEECCCCCC-------CHHHHHHHHHHHHC--
T ss_pred CeEEEcCCCchHHHHHHHHhCccc----cc--------------ccccCccccccc---ccchHHHHHHHHHHHHhhcC
Confidence 999999999999999999999882 11 112234444430 11356777788888776543
No 19
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=100.00 E-value=3.4e-82 Score=689.11 Aligned_cols=475 Identities=12% Similarity=0.037 Sum_probs=379.6
Q ss_pred CCCcEEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhcC
Q 008692 7 PKDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSL 86 (557)
Q Consensus 7 ~~~~~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~~ 86 (557)
|+++++||||+|||++|++|||.+|+++...+.++... .+++ .++ +||.|||+++||++++++++++..
T Consensus 1 m~~~~~lgiDiGtts~k~~l~d~~g~~~~~~~~~~~~~--~~~~---~~~----~g~~e~d~~~~~~~i~~~~~~~~~-- 69 (489)
T 2uyt_A 1 MTFRNCVAVDLGASSGRVMLARYERECRSLTLREIHRF--NNGL---HSQ----NGYVTWDVDSLESAIRLGLNKVCA-- 69 (489)
T ss_dssp -CCEEEEEEEECSSEEEEEEEEEEGGGTEEEEEEEEEE--ECCC---EEE----TTEEECCHHHHHHHHHHHHHHHHH--
T ss_pred CCcceEEEEEecCCCceEEEEEecCccceEEEEEEeec--CCCc---ccc----CCeEEECHHHHHHHHHHHHHHHHh--
Confidence 66789999999999999999999999888777665321 1111 221 244555555999999999988754
Q ss_pred CCCCeeEEEEeccccceEEEcCCCccccccCCCCCCcccccccccCCCCCccccCCCcHHHHHHHHHHhCChHHHHHHhC
Q 008692 87 DLSKVTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTG 166 (557)
Q Consensus 87 ~~~~I~aIgis~~~~~~v~vD~~g~pl~~~~d~~~pl~~~l~~~~~l~~~i~w~D~Ra~~~~~~l~~~~~~~~~~~~~tG 166 (557)
...+|.+||||+|||++++||++|+|+ +|+|+|+|.|+.++++++.+..+ .++++++||
T Consensus 70 ~~~~i~~Igis~q~~~~v~~D~~G~~l--------------------~~~i~w~D~R~~~~~~~l~~~~~-~~~~~~~tG 128 (489)
T 2uyt_A 70 AGIAIDSIGIDTWGVDFVLLDQQGQRV--------------------GLPVAYRDSRTNGLMAQAQQQLG-KRDIYQRSG 128 (489)
T ss_dssp TTCCCCEEEEEECSSCEEEECTTSCEE--------------------SCCBCTTCGGGTTHHHHHHHHHC-HHHHHHHHC
T ss_pred CCCCceEEEEecCcccEEEECCCCCCc--------------------cCCccccCCccHHHHHHHHHhcC-HHHHHHHhC
Confidence 245799999999999999999999984 78999999999999999998774 578999999
Q ss_pred CCCCCCChHHHHHHHhhhCChhhhcccceeechhhHHHHHhCCcccccccccccccccccCCCCCcHHHHHHcCCchhhh
Q 008692 167 SRGYERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETDAAGMNLMDIRQRVWSKIVLEATAPSLEEK 246 (557)
Q Consensus 167 ~~~~~~~~~~kl~Wl~~~~pe~~~~~~~~l~~~dyl~~~LTG~~~~~d~s~As~t~l~d~~~~~W~~~ll~~~g~~~~~~ 246 (557)
+++++.++++||+|+++|+||+|++++++++++|||.|+|||+++ +|+|+||+|+|||+++++||+++|+.+|.+ .++
T Consensus 129 ~~~~~~~~~~kl~Wl~~~~P~~~~~~~~~l~~~dyl~~~LTG~~~-~d~s~As~t~l~d~~~~~W~~~ll~~~gi~-~~~ 206 (489)
T 2uyt_A 129 IQFLPFNTLYQLRALTEQQPELIPHIAHALLMPDYFSYRLTGKMN-WEYTNATTTQLVNINSDDWDESLLAWSGAN-KAW 206 (489)
T ss_dssp CCCCTTSHHHHHHHHHHHCGGGGGGCCEEEEHHHHHHHHHHSCCC-CBHHHHGGGTCEETTTTEECHHHHHHHTCC-GGG
T ss_pred CCCCCccHHHHHHHHHhcCchHHHHhhhccCcHHHHHHHHhCCcc-ceehhhhhhcccccCcCccCHHHHHHcCCC-HHH
Confidence 999999999999999999999999999999999999999999997 999999999999999999999999999933 789
Q ss_pred cCCcccCCccccccCHHHHHHcCCCCCCeEEE-cCChhhhhhhccCCCCCCcEEEEecccceeccccCCCCCCCcc---e
Q 008692 247 LGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQ-WSGDNPNSLAGLTLSTSGDLAISLGTSDTVFGITDDPEPRLEG---H 322 (557)
Q Consensus 247 LP~i~~~~~~~G~l~~~~a~~~GL~~g~pV~~-G~~D~~aa~~g~g~~~~g~~~~~~GTs~~~~~~~~~~~~~~~~---~ 322 (557)
||+|+++++++|+++.+ .| +||||++ |++|++|+++|+|+.++|++++++|||+++.+.+++|..+... .
T Consensus 207 lP~i~~~~~~~G~~~~~----~~--~g~pV~~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~ 280 (489)
T 2uyt_A 207 FGRPTHPGNVIGHWICP----QG--NEIPVVAVASHDTASAVIASPLNGSRAAYLSSGTWSLMGFESQTPFTNDTALAAN 280 (489)
T ss_dssp SCCCBCTTCEEEEEECT----TC--CEEEEECCCCBHHHHHHHHSCCCSTTEEEEEESSSEEEEEEESSCCCSHHHHHHT
T ss_pred CCCccCCCcceeeeecc----cC--CCCcEEEECchHHHHHHhcCCCCCCCcEEEEEchHhhcccccCCCccCHHHHhhc
Confidence 99999999999998642 23 7899997 8899999999999999999999999999998888877655321 1
Q ss_pred eecCccCCCcEEEEEEeechhhHHHHHHHHhc----CchHHHHHHHHhcCCCCCCCeEeEeccCCCCCCCCCCceeeeee
Q 008692 323 VFPNPVDTKGYMIMLVYKNASLTREDVRNRCA----EKSWDVFNKYLQQTPPLNGGKMGFYYKEHEILPPLPVGFHRYIL 398 (557)
Q Consensus 323 ~~~~~~~~g~~~~~~~~~~~G~~~~W~~~~~~----~~~~~~l~~~a~~~~~g~~gl~~lP~l~Ger~P~~~~g~~~~~~ 398 (557)
.+++...++.|..++.++ + .|+++.+. .+.|+++.+.+ +.+||+++ +|+| ++.|+...+ .+
T Consensus 281 ~~~~~~~~~~~~~~~~~~-g----~W~~~~~~~~~~~~~~~~l~~~a-~~~~~~~~-l~~p----~~~~~~~p~----~~ 345 (489)
T 2uyt_A 281 ITNEGGAEGRYRVLKNIM-G----LWLLQRVLQERQINDLPALIAAT-QALPACRF-IINP----NDDRFINPD----EM 345 (489)
T ss_dssp CEEECCGGGCEEEEEEEC-T----THHHHHHHHHTTCCCHHHHHHHH-TTSCSSSS-CCCT----TSGGGSSCS----CH
T ss_pred ceeecCCCCeEEEehhHh-H----HHHHHHhhcccchhhHHHHHHHh-ccCCCcCe-eECC----CCCccCChh----hh
Confidence 122223478899988765 2 58888653 24677777765 56777764 4788 344430000 01
Q ss_pred cccccccccccccccccCCChhhHHHHHHHHHHHHHHHHHHHcCC--CCCCCEEEEecCCcchhhHHHHHHHHhCCceEE
Q 008692 399 ENFEGETLDGVNEVEVKEFDPPSEVRALVEGQFLSMRGHAERFGL--PSPPRRIIATGGASANQTILSCLASIYGCDIYT 476 (557)
Q Consensus 399 ~~~~~g~~~Gl~~~~~~~~~~~~l~rAvlEgia~~~r~~~~~l~~--~~~~~~i~~~GGga~s~~w~Qi~Advlg~pv~~ 476 (557)
.+..+|.+.|+... .+|+++||+||++|||||++|++++.|++ |.++++|+++||++||++|+||+||+||+||.+
T Consensus 346 ~~~~~g~~~g~~~~--~~~t~~~l~RAvlEgia~~~r~~~~~l~~~~g~~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~ 423 (489)
T 2uyt_A 346 CSEIQAACREMAQP--IPESDAELARCIFDSLALLYADVLHELAQLRGEDFSQLHIVGGGCQNTLLNQLCADACGIRVIA 423 (489)
T ss_dssp HHHHHHHHHHTTCC--CCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSEEEEESGGGGCHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHHHhcCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCChhhhHHHHHHHHHHHCCeeec
Confidence 22357888887421 12699999999999999999999999975 678999999999999999999999999999998
Q ss_pred ecCCCchhHHHHHHHHhccccccCCCCCCHHHHHhhhcccccceeecccccCchhhH-HHHHHHHHHHHHHHH
Q 008692 477 VQRPDSASLGAALRAAHGYLCSKKGSFVPISNMYKDKLEKTSLSCKLAVTAGDQQLV-SKYAVMMKKRLEIEN 548 (557)
Q Consensus 477 ~~~~e~~alGAA~lA~~a~~~~~~G~~~~~~~a~~~~~~~~~~~~~P~~~~~~~~~~-~~Y~~~y~~y~~l~~ 548 (557)
+. .|++++|||++|+.|... .|.+++++++.+. +.. .++|+|++++ + +.|+++|++|+++.+
T Consensus 424 ~~-~e~~alGaa~~A~~a~~~--~~~~~~~~~~~~~-~~~-~~~~~P~~~~-----~~~~Y~~~~~~y~~~~~ 486 (489)
T 2uyt_A 424 GP-VEASTLGNIGIQLMTLDE--LNNVDDFRQVVST-TAN-LTTFTPNPDS-----EIAHYVALIHSTRQTKE 486 (489)
T ss_dssp CC-TTHHHHHHHHHHHHHTTS--CCCHHHHHHHHHH-HSC-CEEECCCTTS-----HHHHHHHHTTC------
T ss_pred CC-ccHhHHHHHHHHHHHcCc--cccHHHHHHHHHh-hCC-CeEECCCcch-----HHHHHHHHHHHhhchhh
Confidence 76 799999998777777110 3444555556554 323 4789999999 8 999999999998864
No 20
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=99.74 E-value=9.4e-18 Score=167.76 Aligned_cols=127 Identities=16% Similarity=0.096 Sum_probs=99.9
Q ss_pred chhhHHHHHHHHhcCchHHHHHHHHhcCCCCCCCeEeEeccCCCCCCCCCCceeeeeecccccccccccccccccCCChh
Q 008692 341 NASLTREDVRNRCAEKSWDVFNKYLQQTPPLNGGKMGFYYKEHEILPPLPVGFHRYILENFEGETLDGVNEVEVKEFDPP 420 (557)
Q Consensus 341 ~~G~~~~W~~~~~~~~~~~~l~~~a~~~~~g~~gl~~lP~l~Ger~P~~~~g~~~~~~~~~~~g~~~Gl~~~~~~~~~~~ 420 (557)
.+|..++|+.+.++. ++++|++++.+.+ .||..|+|++. ++++.+.++... .++++
T Consensus 130 GtG~~le~~a~~lg~-~~~el~~la~~~~--------~p~~~~~~c~v------------fa~s~v~~l~~~---g~~~~ 185 (270)
T 1hux_A 130 GTGRFLDVMANILEV-KVSDLAELGAKST--------KRVAISSTCTV------------FAESEVISQLSK---GTDKI 185 (270)
T ss_dssp TSHHHHHHHHHHHTC-CTTTHHHHHTTCC--------SCCCCCCCSHH------------HHHHHHHHHHHT---TCCHH
T ss_pred hhHHHHHHHHHHhCC-CHHHHHHHHhhCC--------CCCCcccccch------------hHhHHHHHHhhC---CCCHH
Confidence 357789999998864 6888998887643 56777888764 223344444321 26899
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEecCCcchhhHHHHHHHHhCCceEEecCCC-chhHHHHHHHHhc
Q 008692 421 SEVRALVEGQFLSMRGHAERFGLPSPPRRIIATGGASANQTILSCLASIYGCDIYTVQRPD-SASLGAALRAAHG 494 (557)
Q Consensus 421 ~l~rAvlEgia~~~r~~~~~l~~~~~~~~i~~~GGga~s~~w~Qi~Advlg~pv~~~~~~e-~~alGAA~lA~~a 494 (557)
|++|+++|+|++.+...++.. +. .++|+++||+++|+.|+|+++|++|+||.+++..+ .+|+|||++|+..
T Consensus 186 di~~av~e~Va~~i~~~~~~~--~~-~~~i~~~GG~a~n~~~~~~~~~~lg~~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 186 DIIAGIHRSVASRVIGLANRV--GI-VKDVVMTGGVAQNYGVRGALEEGLGVEIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT--CC-CSSEEEESGGGGCHHHHHHHHHHHCSCEECCGGGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcC--CC-CCeEEEeCccccCHHHHHHHHHHHCCCeEeCCCcchHhHHHHHHHHHHh
Confidence 999999999999986665543 22 47899999999999999999999999999988777 6999999999876
No 21
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=98.92 E-value=2.7e-08 Score=98.65 Aligned_cols=71 Identities=15% Similarity=0.178 Sum_probs=58.5
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEecCCcchhhHHHHHHHHhCCceEEecC-CCchhHHHHHHH
Q 008692 418 DPPSEVRALVEGQFLSMRGHAERFGLPSPPRRIIATGGASANQTILSCLASIYGCDIYTVQR-PDSASLGAALRA 491 (557)
Q Consensus 418 ~~~~l~rAvlEgia~~~r~~~~~l~~~~~~~~i~~~GGga~s~~w~Qi~Advlg~pv~~~~~-~e~~alGAA~lA 491 (557)
...++++.+++.++..++..++... .++.|+++||+++++.+.+++.+.|+.||.++.. .+++|+|||+.|
T Consensus 201 ~~~~~~~~~~~~i~~~i~~~l~~~~---~~~~ivL~GG~a~~~~l~~~l~~~l~~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 201 EIMRVVRPVIEKMALIVKEVIKNYD---QTLPVYVVGGTAYLTGFSEEFSRFLGKEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSC---SSCCEEEESGGGGSTTHHHHHHHHHSSCCBCCSSGGGHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC---CCCEEEEECCccchhhHHHHHHHHhCCCccccCChHHHHHHHHHhcC
Confidence 4678889999988877776665432 3789999999999999999999999999997654 468999999854
No 22
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=98.46 E-value=2.2e-07 Score=94.53 Aligned_cols=78 Identities=6% Similarity=0.085 Sum_probs=62.7
Q ss_pred cEEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhc--CC
Q 008692 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS--LD 87 (557)
Q Consensus 10 ~~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~--~~ 87 (557)
+|+||||+|+|++|++++|.+|+++.+.+.+++ .+++++ ++++.+.++++++.+. .+
T Consensus 6 ~~~lgiDiggt~~~~~l~d~~g~il~~~~~~~~-----------~~~~~~----------~~~~~l~~~i~~~~~~~~~~ 64 (326)
T 2qm1_A 6 KKIIGIDLGGTTIKFAILTTDGVVQQKWSIETN-----------ILEDGK----------HIVPSIIESIRHRIDLYNMK 64 (326)
T ss_dssp CEEEEEEECSSEEEEEEEETTCCEEEEEEEECC-----------CTTTTT----------THHHHHHHHHHHHHHHTTCC
T ss_pred cEEEEEEECCCEEEEEEECCCCCEEEEEEEcCC-----------CCCCHH----------HHHHHHHHHHHHHHHHcCCC
Confidence 589999999999999999999999988877654 124666 8999999999887654 34
Q ss_pred CCCeeEEEEeccccceEEEcCC-Ccc
Q 008692 88 LSKVTAVSGSGQQHGSVYWKKG-SAT 112 (557)
Q Consensus 88 ~~~I~aIgis~~~~~~v~vD~~-g~p 112 (557)
..+|.+|||+..+ ++|.+ |..
T Consensus 65 ~~~i~~igi~~pG----~vd~~~g~v 86 (326)
T 2qm1_A 65 KEDFVGIGMGTPG----SVDIEKGTV 86 (326)
T ss_dssp GGGEEEEEEEESS----EEETTTTEE
T ss_pred ccceeEEEEeccc----ceeCCCCEE
Confidence 4679999999887 67764 543
No 23
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=98.33 E-value=9.1e-07 Score=93.08 Aligned_cols=78 Identities=10% Similarity=0.110 Sum_probs=62.8
Q ss_pred CcEEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhc--C
Q 008692 9 DSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS--L 86 (557)
Q Consensus 9 ~~~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~--~ 86 (557)
..|+||||+|+|++|++++|.+|+++.+.+.+++ +++|+ ++++.+.++++++.+. .
T Consensus 84 ~~~~lgiDiG~t~i~~~l~d~~G~il~~~~~~~~------------~~~~~----------~~~~~l~~~i~~~~~~~~~ 141 (406)
T 1z6r_A 84 AWHYLSLRISRGEIFLALRDLSSKLVVEESQELA------------LKDDL----------PLLDRIISHIDQFFIRHQK 141 (406)
T ss_dssp TCEEEEEEEETTEEEEEEEETTCCEEEEEEEECC------------SSCSS----------CHHHHHHHHHHHHHHHTGG
T ss_pred ccEEEEEEEcCCEEEEEEEcCCCCEEEEEEecCC------------CCCHH----------HHHHHHHHHHHHHHHhcCC
Confidence 3589999999999999999999999988776652 24667 8999999999887654 3
Q ss_pred CCCCeeEEEEeccccceEEEcCC-Ccc
Q 008692 87 DLSKVTAVSGSGQQHGSVYWKKG-SAT 112 (557)
Q Consensus 87 ~~~~I~aIgis~~~~~~v~vD~~-g~p 112 (557)
+..+|.+|||+..+ ++|.+ |..
T Consensus 142 ~~~~i~gigi~~pG----~vd~~~g~v 164 (406)
T 1z6r_A 142 KLERLTSIAITLPG----IIDTENGIV 164 (406)
T ss_dssp GCCCEEEEEEEESS----EEETTTTEE
T ss_pred CcCceeEEEEEeec----CEeCCCCEE
Confidence 45789999999887 67765 544
No 24
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=98.31 E-value=5e-07 Score=92.81 Aligned_cols=84 Identities=12% Similarity=-0.003 Sum_probs=60.0
Q ss_pred CCCCCCCCcEEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHH
Q 008692 2 EDYSLPKDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQK 81 (557)
Q Consensus 2 ~~~~~~~~~~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~ 81 (557)
|...+.+..|+||||+|+|++|++++|.+|+++.+.+.+.+ ++++ ++++.+.+.+++
T Consensus 22 ~~l~~~~~~~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~~-------------~~~~----------~~~~~i~~~i~~ 78 (343)
T 2yhw_A 22 ENLYFQGTLSALAVDLGGTNLRVAIVSMKGEIVKKYTQFNP-------------KTYE----------ERINLILQMCVE 78 (343)
T ss_dssp ------CEEEEEEEEECSSEEEEEEEETTSCEEEEEEEECC-------------SSHH----------HHHHHHHHHHHH
T ss_pred hheEeCCCcEEEEEEECCCEEEEEEECCCCcEEEEEEEcCC-------------CCHH----------HHHHHHHHHHHH
Confidence 33444455799999999999999999999999987765432 1344 788888888877
Q ss_pred Hhhc--CCCCCeeEEEEeccccceEEEcCC-Ccc
Q 008692 82 LSKS--LDLSKVTAVSGSGQQHGSVYWKKG-SAT 112 (557)
Q Consensus 82 l~~~--~~~~~I~aIgis~~~~~~v~vD~~-g~p 112 (557)
+.+. ....+|.+|||+..+ ++|.+ |..
T Consensus 79 ~~~~~~~~~~~i~gigi~~pG----~vd~~~g~v 108 (343)
T 2yhw_A 79 AAAEAVKLNCRILGVGISTGG----RVNPREGIV 108 (343)
T ss_dssp HHHHHHHTTEEEEEEEEEESS----EEETTTTEE
T ss_pred HHHhcccccCceEEEEEeccc----CEeCCCCEE
Confidence 6543 334679999999888 77764 543
No 25
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=98.25 E-value=5.9e-07 Score=91.50 Aligned_cols=72 Identities=18% Similarity=0.207 Sum_probs=58.3
Q ss_pred cEEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhcCCCC
Q 008692 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDLS 89 (557)
Q Consensus 10 ~~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~~~~~ 89 (557)
+|+||||+|+|++|++++|.+|+++.+.+.+++ ++|+ .+++.+.+.++++.+. .
T Consensus 2 ~~~lgiDiGgt~i~~~l~d~~G~i~~~~~~~~~-------------~~~~----------~~~~~i~~~i~~~~~~---~ 55 (321)
T 3vgl_A 2 GLTIGVDIGGTKIAAGVVDEEGRILSTFKVATP-------------PTAE----------GIVDAICAAVAGASEG---H 55 (321)
T ss_dssp CEEEEEEECSSEEEEEEECTTCCBCCCEEEECC-------------SSHH----------HHHHHHHHHHHHHHTT---C
T ss_pred cEEEEEEECCCEEEEEEECCCCCEEEEEEeeCC-------------CCHH----------HHHHHHHHHHHHHHhh---c
Confidence 589999999999999999999999987665541 2455 8999999999887642 4
Q ss_pred CeeEEEEeccccceEEEcCC-Cc
Q 008692 90 KVTAVSGSGQQHGSVYWKKG-SA 111 (557)
Q Consensus 90 ~I~aIgis~~~~~~v~vD~~-g~ 111 (557)
+|.+|||+..+ ++|.+ |.
T Consensus 56 ~i~gigi~~pG----~vd~~~g~ 74 (321)
T 3vgl_A 56 DVEAVGIGAAG----YVDDKRAT 74 (321)
T ss_dssp CEEEEEEEESS----EECTTSSC
T ss_pred CceEEEEeccc----cEeCCCCE
Confidence 79999999877 78865 44
No 26
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=98.17 E-value=5.1e-07 Score=92.73 Aligned_cols=72 Identities=10% Similarity=0.129 Sum_probs=56.6
Q ss_pred cEEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhc--CC
Q 008692 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS--LD 87 (557)
Q Consensus 10 ~~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~--~~ 87 (557)
+|+||||+|+|++|++++|.+|+++.+.+.+.. ...+++++ ++++.+.++++++.+. ..
T Consensus 6 ~~~lgiDiGgt~~~~~l~d~~g~i~~~~~~~~~---------~~~~~~~~----------~~~~~i~~~i~~~~~~~~~~ 66 (347)
T 2ch5_A 6 AIYGGVEGGGTRSEVLLVSEDGKILAEADGLST---------NHWLIGTD----------KCVERINEMVNRAKRKAGVD 66 (347)
T ss_dssp CEEEEEEECTTCEEEEEEETTSCEEEEEEECCC---------CHHHHCHH----------HHHHHHHHHHHHHHHHHTCC
T ss_pred eEEEEEEcCccceEEEEEeCCCCEEEEEeCCCC---------CcccCCHH----------HHHHHHHHHHHHHHHhcCCC
Confidence 489999999999999999999999987765321 01245666 8999999999887654 34
Q ss_pred CC-CeeEEEEeccc
Q 008692 88 LS-KVTAVSGSGQQ 100 (557)
Q Consensus 88 ~~-~I~aIgis~~~ 100 (557)
.. +|.+|||+..+
T Consensus 67 ~~~~i~gigi~~pG 80 (347)
T 2ch5_A 67 PLVPLRSLGLSLSG 80 (347)
T ss_dssp TTCCBSEEEEEETT
T ss_pred cccceeEEEEeccC
Confidence 45 79999998877
No 27
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=98.13 E-value=1.9e-06 Score=89.86 Aligned_cols=78 Identities=15% Similarity=0.209 Sum_probs=61.9
Q ss_pred cEEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhc--CC
Q 008692 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS--LD 87 (557)
Q Consensus 10 ~~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~--~~ 87 (557)
.|+||||+|+|++|++++|.+|+++.+.+.+++ .+++++ .+++.+.++++++.+. .+
T Consensus 87 ~~~lGIDiGgt~i~~~l~d~~G~vl~~~~~~~~-----------~~~~~~----------~~~~~l~~~i~~~~~~~~~~ 145 (380)
T 2hoe_A 87 AYVLGIEVTRDEIAACLIDASMNILAHEAHPLP-----------SQSDRE----------ETLNVMYRIIDRAKDMMEKL 145 (380)
T ss_dssp CEEEEEEECSSEEEEEEEETTCCEEEEEEEECC-----------SSCCHH----------HHHHHHHHHHHHHHHHHHHT
T ss_pred CeEEEEEECCCEEEEEEECCCCCEEEEEEEccC-----------CCCCHH----------HHHHHHHHHHHHHHHhcCCC
Confidence 589999999999999999999999988776653 133555 8999999888887654 34
Q ss_pred CCCeeEEEEeccccceEEEcC-CCcc
Q 008692 88 LSKVTAVSGSGQQHGSVYWKK-GSAT 112 (557)
Q Consensus 88 ~~~I~aIgis~~~~~~v~vD~-~g~p 112 (557)
..+|.+|||+..+ ++|. +|..
T Consensus 146 ~~~i~gigi~~pG----~vd~~~g~v 167 (380)
T 2hoe_A 146 GSKLSALTVAAPG----PIDTERGII 167 (380)
T ss_dssp TCCCCEEEEEESS----CEETTTTEE
T ss_pred cCcEEEEEEEeec----cEECCCCEE
Confidence 5689999999877 6676 4654
No 28
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=98.13 E-value=2.7e-06 Score=86.80 Aligned_cols=81 Identities=12% Similarity=0.231 Sum_probs=61.1
Q ss_pred CCCCCCcEEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHh
Q 008692 4 YSLPKDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLS 83 (557)
Q Consensus 4 ~~~~~~~~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~ 83 (557)
+.+..+.|+||||+|+|++|++++|.+|+++.+.+.+++. .+++ .+++.+.+.++++.
T Consensus 18 l~~n~~~~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~~~------------~~~~----------~~~~~i~~~i~~~~ 75 (327)
T 4db3_A 18 LYFQSNAMYYGFDVGGTKIEFGAFNEKLERVATERVPTPT------------DDYP----------LLLETIAGLVAKYD 75 (327)
T ss_dssp TTSCCSCCEEEEEECSSEEEEEEECTTCCEEEEEEEECCT------------TCHH----------HHHHHHHHHHHHHH
T ss_pred EEECCCcEEEEEEECCCEEEEEEEeCCCcEEEEEEecCCC------------CCHH----------HHHHHHHHHHHHHH
Confidence 4445555899999999999999999999999887766531 1455 88998888888776
Q ss_pred hcCCCCCeeEEEEeccccceEEEcC-CCcc
Q 008692 84 KSLDLSKVTAVSGSGQQHGSVYWKK-GSAT 112 (557)
Q Consensus 84 ~~~~~~~I~aIgis~~~~~~v~vD~-~g~p 112 (557)
+.. ..+.+|||+..+ ++|. +|..
T Consensus 76 ~~~--~~~~gigi~~pG----~vd~~~g~v 99 (327)
T 4db3_A 76 QEF--ACEGKIGLGLPG----MEDADDATV 99 (327)
T ss_dssp HHH--TSCCEEEEEESE----EECTTTCCE
T ss_pred Hhc--CCccEEEEEeec----cEeCCCCEE
Confidence 531 247889988776 7785 4653
No 29
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=98.11 E-value=3.6e-06 Score=89.16 Aligned_cols=78 Identities=10% Similarity=0.115 Sum_probs=62.3
Q ss_pred CcEEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhc--C
Q 008692 9 DSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS--L 86 (557)
Q Consensus 9 ~~~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~--~ 86 (557)
..|+||||+|+|++|++++|.+|+++.+.+.+++ .++++ ++++.+.++++++.+. .
T Consensus 107 ~~~~lGIDiGgt~i~~~l~d~~G~il~~~~~~~~------------~~~~~----------~~~~~l~~~i~~~~~~~~~ 164 (429)
T 1z05_A 107 GWQFLSMRLGRGYLTIALHELGGEVLIDTKIDIH------------EIDQD----------DVLARLLFEIEEFFQTYAA 164 (429)
T ss_dssp TEEEEEEEEETTEEEEEEEETTSCEEEEEEEECC------------CCBHH----------HHHHHHHHHHHHHHHHTTT
T ss_pred CCEEEEEEECCCEEEEEEECCCCCEEEEEEEcCC------------CCCHH----------HHHHHHHHHHHHHHHhcCC
Confidence 3589999999999999999999999988766653 12455 8999999999887654 4
Q ss_pred CCCCeeEEEEeccccceEEEcCC-Ccc
Q 008692 87 DLSKVTAVSGSGQQHGSVYWKKG-SAT 112 (557)
Q Consensus 87 ~~~~I~aIgis~~~~~~v~vD~~-g~p 112 (557)
...+|.+|||+..+ ++|.+ |..
T Consensus 165 ~~~~i~gigi~~pG----~vd~~~g~v 187 (429)
T 1z05_A 165 QLDRVTSIAITLPG----LVNSEQGIV 187 (429)
T ss_dssp TCCEEEEEEEEESS----EEETTTTEE
T ss_pred CcCceEEEEEeccC----cEeCCCCeE
Confidence 45689999999887 77864 653
No 30
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=98.05 E-value=1.6e-06 Score=87.16 Aligned_cols=98 Identities=11% Similarity=0.016 Sum_probs=69.7
Q ss_pred EEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhcCCCCC
Q 008692 11 LFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDLSK 90 (557)
Q Consensus 11 ~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~~~~~~ 90 (557)
|+||||+|+|++|++++|.+|+++.+.+.+++ . ..+++++ ++++.+.+.++++.+..
T Consensus 3 ~~lgiDiGgt~~~~~l~d~~g~i~~~~~~~~~------~---~~~~~~~----------~~~~~i~~~i~~~~~~~---- 59 (299)
T 2e2o_A 3 IIVGVDAGGTKTKAVAYDCEGNFIGEGSSGPG------N---YHNVGLT----------RAIENIKEAVKIAAKGE---- 59 (299)
T ss_dssp CEEEEEECSSCEEEEEECTTSCEEEEEEESCC------C---HHHHCHH----------HHHHHHHHHHHHHHTSC----
T ss_pred EEEEEEeCCCcEEEEEEcCCCCEEEEEeCCCC------C---cccCCHH----------HHHHHHHHHHHHHHhcC----
Confidence 79999999999999999999999988765542 1 1356666 89999999998876531
Q ss_pred eeEEEEeccccceEEEcCC-CccccccCCCCCCcccccccccCCCCCccccCCCcHHH
Q 008692 91 VTAVSGSGQQHGSVYWKKG-SATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQ 147 (557)
Q Consensus 91 I~aIgis~~~~~~v~vD~~-g~pl~~~~d~~~pl~~~l~~~~~l~~~i~w~D~Ra~~~ 147 (557)
+.+|||+..+ + |.+ |.. ||.+.|+. |. .|+++++|.++...
T Consensus 60 ~~~igi~~~G----~-~~~~~~~---------~l~~~l~~-~~-~pv~v~ND~~aaa~ 101 (299)
T 2e2o_A 60 ADVVGMGVAG----L-DSKFDWE---------NFTPLASL-IA-PKVIIQHDGVIALF 101 (299)
T ss_dssp CSEEEEEETT----C-CSHHHHH---------HHHHHHTT-SS-SEEEEEEHHHHHHH
T ss_pred CCEEEEEcCC----C-CchhHHH---------HHHHHHHh-CC-CCEEEeCcHHHHHh
Confidence 5566655544 2 221 211 56666666 65 48889999987654
No 31
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=98.01 E-value=7.6e-05 Score=78.65 Aligned_cols=61 Identities=11% Similarity=0.101 Sum_probs=51.3
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHcCC-------CCCCCEEEEecCCcchhhHHHHHHHHhCCceEEec
Q 008692 418 DPPSEVRALVEGQFLSMRGHAERFGL-------PSPPRRIIATGGASANQTILSCLASIYGCDIYTVQ 478 (557)
Q Consensus 418 ~~~~l~rAvlEgia~~~r~~~~~l~~-------~~~~~~i~~~GGga~s~~w~Qi~Advlg~pv~~~~ 478 (557)
.-.+++++.+|-+.-.++..++.... ...++.|+++||+|+-+.+.+++++.||+||++..
T Consensus 293 ~l~~ii~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g~~vri~~ 360 (419)
T 4a2a_A 293 KLSVIIHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKSPVRTGC 360 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHTSCEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHCCCeEEEe
Confidence 46778899999999999999887642 23568899999999999999999999999998765
No 32
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=97.97 E-value=1.8e-05 Score=80.39 Aligned_cols=78 Identities=14% Similarity=0.151 Sum_probs=61.3
Q ss_pred CCcEEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhcCC
Q 008692 8 KDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLD 87 (557)
Q Consensus 8 ~~~~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~~~ 87 (557)
+..|+||||+|.|++|++++|.+|+++.+.+.+++ ...+++ .+++.+.+.++++.+ .
T Consensus 17 ~~~~~lgidiggt~i~~~l~d~~g~il~~~~~~~~-----------~~~~~~----------~~~~~i~~~i~~~~~--~ 73 (321)
T 3r8e_A 17 FQGMILGIDVGGTSVKFGLVTPEGEIQNATRFMTA-----------DWVNGI----------GFVESMKLEIGNFLK--Q 73 (321)
T ss_dssp --CCEEEEECCSSEEEEEEECTTCCEEEEEEEEHH-----------HHHTTT----------CHHHHHHHHHHHHHH--H
T ss_pred cCcEEEEEEECCCEEEEEEEcCCCcEEEEEEEeCC-----------CCCCHH----------HHHHHHHHHHHHHHh--c
Confidence 34689999999999999999999999998876654 234677 789988888887764 2
Q ss_pred CCCeeEEEEeccccceEEEcC-CCcc
Q 008692 88 LSKVTAVSGSGQQHGSVYWKK-GSAT 112 (557)
Q Consensus 88 ~~~I~aIgis~~~~~~v~vD~-~g~p 112 (557)
..+|.+|||+..+ ++|. +|..
T Consensus 74 ~~~i~gigi~~pG----~vd~~~g~v 95 (321)
T 3r8e_A 74 YPIVKGVGIGWPG----LVSLDRTKV 95 (321)
T ss_dssp CTTCCEEEEEESS----EECTTSCCE
T ss_pred cCCeeEEEEEecc----cEECCCCEE
Confidence 4679999999877 7784 4654
No 33
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=97.75 E-value=2.8e-05 Score=78.10 Aligned_cols=71 Identities=17% Similarity=0.231 Sum_probs=51.2
Q ss_pred cEEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhcCCCC
Q 008692 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDLS 89 (557)
Q Consensus 10 ~~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~~~~~ 89 (557)
.|+||||+|.|++|++++|.+|+++.+.+.+++. .+++ .+.+.+.+.++ + ..
T Consensus 4 m~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~~~------------~~~~----------~~~~~i~~~~~---~---~~ 55 (297)
T 4htl_A 4 MKIAAFDIGGTALKMGVVLPHGEIILTKSAEISG------------SDGD----------QILAEMKVFLA---E---NT 55 (297)
T ss_dssp CCEEEEEECSSEEEEEEECTTSCEEEEEEEECST------------TCHH----------HHHHHHHHHHH---T---CT
T ss_pred cEEEEEEeCCCeEEEEEECCCCCEEEEEEecCCC------------CCHH----------HHHHHHHHHHh---h---cC
Confidence 4799999999999999999999999987766431 1223 55554443332 2 35
Q ss_pred CeeEEEEeccccceEEEcCC-Ccc
Q 008692 90 KVTAVSGSGQQHGSVYWKKG-SAT 112 (557)
Q Consensus 90 ~I~aIgis~~~~~~v~vD~~-g~p 112 (557)
+|.+|||+..+ ++|.+ |..
T Consensus 56 ~i~gigi~~pG----~vd~~~g~v 75 (297)
T 4htl_A 56 DVTGIAVSAPG----YVNPKTGLI 75 (297)
T ss_dssp TCCEEEEEESS----EECTTTCEE
T ss_pred CeeEEEEecCc----ceeCCCCEE
Confidence 79999999877 78864 654
No 34
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=97.74 E-value=2.9e-05 Score=78.55 Aligned_cols=75 Identities=7% Similarity=0.055 Sum_probs=57.1
Q ss_pred cEEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhcCCCC
Q 008692 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDLS 89 (557)
Q Consensus 10 ~~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~~~~~ 89 (557)
.|+||||+|.|++|++++|.+|+++.+.+.+.+ +.+++ .+++.+.+.++++.+.. ..
T Consensus 7 ~~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~~------------~~~~~----------~~~~~i~~~i~~~~~~~-~~ 63 (310)
T 3htv_A 7 NVVAGVDMGATHIRFCLRTAEGETLHCEKKRTA------------EVIAP----------GLVSGIGEMIDEQLRRF-NA 63 (310)
T ss_dssp EEEEEEEECSSEEEEEEEETTSCEEEEEEEEHH------------HHHTT----------CHHHHHHHHHHHHHHHH-TE
T ss_pred CEEEEEEeCCCEEEEEEECCCCCEEEEEEecCc------------cccHH----------HHHHHHHHHHHHHHHhc-CC
Confidence 589999999999999999999999988766543 22355 68888888887765431 23
Q ss_pred CeeEEEEeccccceEEEcCC-Cc
Q 008692 90 KVTAVSGSGQQHGSVYWKKG-SA 111 (557)
Q Consensus 90 ~I~aIgis~~~~~~v~vD~~-g~ 111 (557)
+|.+|||+..+ ++|.+ |.
T Consensus 64 ~i~gigi~~pG----~vd~~~g~ 82 (310)
T 3htv_A 64 RCHGLVMGFPA----LVSKDKRT 82 (310)
T ss_dssp EEEEEEEEESS----CBCTTSSC
T ss_pred CeeEEEEeccc----cEeCCCCE
Confidence 68999999876 67865 54
No 35
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=97.72 E-value=0.00026 Score=70.39 Aligned_cols=142 Identities=12% Similarity=0.067 Sum_probs=88.1
Q ss_pred EEeechhhHHHHHHHHhcCchHHHHHHHHhcCCCCCCCeEeEeccCC---CCCCCCC-Cceeeeeecccccccccccccc
Q 008692 337 LVYKNASLTREDVRNRCAEKSWDVFNKYLQQTPPLNGGKMGFYYKEH---EILPPLP-VGFHRYILENFEGETLDGVNEV 412 (557)
Q Consensus 337 ~~~~~~G~~~~W~~~~~~~~~~~~l~~~a~~~~~g~~gl~~lP~l~G---er~P~~~-~g~~~~~~~~~~~g~~~Gl~~~ 412 (557)
++...+|..++-.+..++..++++|.++|.+-..-.-.+. +--+.| ...|... ...|+ + ++.=++.
T Consensus 136 g~aaGgGtFl~l~a~ll~~~~~~el~~lA~~g~~~~vDl~-v~DIy~~~~~~l~~~s~as~Fg-------k-~~~l~~~- 205 (287)
T 2ews_A 136 GIGTGGGMIQGLGYLLSQITDYKQLTDMAQHGDRNTIDLK-VRHIYKDTEPPIPGDLTAANFG-------H-VLHHLDA- 205 (287)
T ss_dssp EESCSHHHHHHHHHHHHCCCCHHHHHHHHTTCCCTTTCEE-TTTC-------CCTTSEEETTT-------T-GGGCTTS-
T ss_pred ccccchhhHHHHHHHHhCCCCHHHHHHHHHcCCccccccc-hhhhcCCCCCCcCcchhhHHHH-------H-HHHHHhC-
Confidence 4445567777766666654689999999865321111111 111111 1122211 11221 1 1110111
Q ss_pred cccCCChhhHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEecC-CcchhhHHHHHHHH---hCCceEEecCCC-chhHHH
Q 008692 413 EVKEFDPPSEVRALVEGQFLSMRGHAERFGLPSPPRRIIATGG-ASANQTILSCLASI---YGCDIYTVQRPD-SASLGA 487 (557)
Q Consensus 413 ~~~~~~~~~l~rAvlEgia~~~r~~~~~l~~~~~~~~i~~~GG-ga~s~~w~Qi~Adv---lg~pv~~~~~~e-~~alGA 487 (557)
..+++|++++++.+|+..+..+.....+..++++|+++|| .+.++..++.+.+. ++.++.+++..+ .+|+||
T Consensus 206 ---g~~~eDIaasl~~sV~~~I~~la~~~a~~~~i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlGA 282 (287)
T 2ews_A 206 ---DFTPSNKLAAVIGVVGEVVTTMAITVAREFKTENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIGA 282 (287)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHHH
T ss_pred ---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHHH
Confidence 2489999999999998887665543111234668999999 89999999999998 588999987665 789999
Q ss_pred HHHH
Q 008692 488 ALRA 491 (557)
Q Consensus 488 A~lA 491 (557)
|+.|
T Consensus 283 aL~~ 286 (287)
T 2ews_A 283 LYLE 286 (287)
T ss_dssp HHTC
T ss_pred HHhC
Confidence 9864
No 36
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=97.71 E-value=7.1e-05 Score=75.32 Aligned_cols=71 Identities=11% Similarity=0.020 Sum_probs=53.2
Q ss_pred cEEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhc--CC
Q 008692 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS--LD 87 (557)
Q Consensus 10 ~~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~--~~ 87 (557)
+|+||||+|+|++|++++|.+|+++.+.+.+.. + ..++++ .+++.+.++++++.+. .+
T Consensus 11 ~~~lGiDiGgT~i~~~l~d~~G~il~~~~~~~~-----~-----~~~~~~----------~~~~~l~~~i~~~l~~~~~~ 70 (305)
T 1zc6_A 11 RYLIGVDGGGTGTRIRLHASDGTPLAMAEGGAS-----A-----LSQGIA----------KSWQAVLSTLEAAFQQAGLP 70 (305)
T ss_dssp CEEEEEEECSSCEEEEEEETTCCEEEEEEESCC-----C-----GGGCHH----------HHHHHHHHHHHHHHHHTTCC
T ss_pred CEEEEEEcCccceEEEEEcCCCCEEEEEeCCCC-----C-----cccCHH----------HHHHHHHHHHHHHHHhcCCC
Confidence 499999999999999999999999987654321 0 124555 8999999999887654 44
Q ss_pred CCCe--eEEEEeccc
Q 008692 88 LSKV--TAVSGSGQQ 100 (557)
Q Consensus 88 ~~~I--~aIgis~~~ 100 (557)
..+| .+|||+..+
T Consensus 71 ~~~i~~~~igig~pG 85 (305)
T 1zc6_A 71 AAPASACAIGLGLSG 85 (305)
T ss_dssp CCCGGGEEEEEEESC
T ss_pred hhhhccceEEEEecC
Confidence 5566 677766544
No 37
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=97.70 E-value=2.8e-05 Score=78.36 Aligned_cols=65 Identities=11% Similarity=0.074 Sum_probs=46.7
Q ss_pred cEEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhcCCCC
Q 008692 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDLS 89 (557)
Q Consensus 10 ~~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~~~~~ 89 (557)
+++||||+|.|++|++++|.+|+++.+.+.+.+ +++ ++++.+.+.++ ..
T Consensus 3 ~~~lgiDiGgt~i~~~l~d~~G~il~~~~~~t~--------------~~~----------~~l~~i~~~~~-------~~ 51 (302)
T 3epq_A 3 AMLGGIEAGGTXFVCAVGREDGTIIDRIEFPTX--------------MPD----------ETIEXVIQYFS-------QF 51 (302)
T ss_dssp CCEEEEEECSSEEEEEEECTTSCEEEEEEEECC--------------CHH----------HHHHHHHHHHT-------TS
T ss_pred cEEEEEEECcceeEEEEEECCCcEEEEEEecCC--------------ChH----------HHHHHHHHHhc-------cC
Confidence 589999999999999999999999987665432 223 55444433322 24
Q ss_pred CeeEEEEeccccceEEEcCC
Q 008692 90 KVTAVSGSGQQHGSVYWKKG 109 (557)
Q Consensus 90 ~I~aIgis~~~~~~v~vD~~ 109 (557)
+|.+|||+..+ ++|.+
T Consensus 52 ~i~gigi~~pG----~vd~~ 67 (302)
T 3epq_A 52 SLQAIGIGSFG----PVDND 67 (302)
T ss_dssp CCSEEEEEECS----SEECC
T ss_pred CceEEEEEece----eeccc
Confidence 78999999876 56654
No 38
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=97.68 E-value=3.6e-05 Score=75.95 Aligned_cols=78 Identities=15% Similarity=0.209 Sum_probs=50.8
Q ss_pred cEEEEEEccCCceEEEEEcCC-CCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhc-CC
Q 008692 10 SLFLGFDSSTQSLKATVLDSN-LNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS-LD 87 (557)
Q Consensus 10 ~~~lgIDiGTts~Ka~l~d~~-G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~-~~ 87 (557)
.|+||||+|.|++|++++|.+ |+++... ..+++ + ...+++ .+.+.+.+.++++.+. ..
T Consensus 12 ~~~lgidiggt~i~~~l~dl~~g~i~~~~-~~~~~--~-------~~~~~~----------~~~~~i~~~i~~~~~~~~~ 71 (267)
T 1woq_A 12 APLIGIDIGGTGIKGGIVDLKKGKLLGER-FRVPT--P-------QPATPE----------SVAEAVALVVAELSARPEA 71 (267)
T ss_dssp CCEEEEEECSSEEEEEEEETTTTEEEEEE-EEEEC--C-------SSCCHH----------HHHHHHHHHHHHHHTSTTC
T ss_pred CEEEEEEECCCEEEEEEEECCCCeEEEEE-EecCC--C-------ccCCHH----------HHHHHHHHHHHHHHHhccc
Confidence 478999999999999999987 6776432 22321 1 112344 7888888888887653 11
Q ss_pred CCCeeEEEEeccccceEEEcCCCcc
Q 008692 88 LSKVTAVSGSGQQHGSVYWKKGSAT 112 (557)
Q Consensus 88 ~~~I~aIgis~~~~~~v~vD~~g~p 112 (557)
...+.+|||+..+ ++| +|..
T Consensus 72 ~~~~~~igi~~pG----~v~-~g~v 91 (267)
T 1woq_A 72 PAAGSPVGVTFPG----IIQ-HGVV 91 (267)
T ss_dssp CCTTCCEEEEESS----CEE-TTEE
T ss_pred cCccceEEEEccc----eEc-CCEE
Confidence 2344567777655 346 5654
No 39
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=97.67 E-value=1.6e-05 Score=80.08 Aligned_cols=73 Identities=12% Similarity=0.072 Sum_probs=52.6
Q ss_pred EEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhcCCCCC
Q 008692 11 LFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDLSK 90 (557)
Q Consensus 11 ~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~~~~~~ 90 (557)
|+||||+|+|++|++++|.+ +++...+.+++ ..+++ .+++.+.++++++.+.. ..+
T Consensus 2 ~~lgiDiGgt~i~~~l~d~~-~~l~~~~~~~~------------~~~~~----------~~~~~i~~~i~~~~~~~-~~~ 57 (302)
T 3vov_A 2 KVVGLDLGGTKIAAGVFDGK-RLLSKVVVPTP------------KEGGE----------RVAEALAEAAERAEREA-GVR 57 (302)
T ss_dssp CEEEEEECSSEEEEEEECSS-SBSCCEEEECC------------SSCHH----------HHHHHHHHHHHHHHHHH-TCC
T ss_pred EEEEEEEcCCEEEEEEEeCC-CcEEEEEEcCC------------CCChH----------HHHHHHHHHHHHHHhhc-cCC
Confidence 78999999999999999988 45554444432 11224 78888888888776431 457
Q ss_pred eeEEEEeccccceEEEcCC-Cc
Q 008692 91 VTAVSGSGQQHGSVYWKKG-SA 111 (557)
Q Consensus 91 I~aIgis~~~~~~v~vD~~-g~ 111 (557)
|.+|||+..+ ++|.+ |.
T Consensus 58 i~gigi~~pG----~vd~~~g~ 75 (302)
T 3vov_A 58 GEAIGLGTPG----PLDFRRGV 75 (302)
T ss_dssp CSSEEEEESS----CEETTTTE
T ss_pred ceEEEEEecc----cEeCCCCE
Confidence 8889998776 67764 54
No 40
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=97.57 E-value=0.00012 Score=72.34 Aligned_cols=74 Identities=22% Similarity=0.266 Sum_probs=62.6
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEecCCcchhhHHHHHHHHhCCceEEecC-CCchhHHHHHHHHhc
Q 008692 418 DPPSEVRALVEGQFLSMRGHAERFGLPSPPRRIIATGGASANQTILSCLASIYGCDIYTVQR-PDSASLGAALRAAHG 494 (557)
Q Consensus 418 ~~~~l~rAvlEgia~~~r~~~~~l~~~~~~~~i~~~GGga~s~~w~Qi~Advlg~pv~~~~~-~e~~alGAA~lA~~a 494 (557)
.++++++++.+.++-.+........ .+++|+++||.++|+.+.+.+++.+|+++.++.. .+.+|+|||++|..-
T Consensus 181 ~~~di~a~~~~~v~~~l~~~~~~~~---~~~~vvl~GGva~n~~lr~~l~~~~g~~~~~p~~p~~~~A~GAAl~A~~~ 255 (276)
T 4ehu_A 181 KIEDIVAGIHTSVAKRVSSLVKRIG---VQRNVVMVGGVARNSGIVRAMAREINTEIIVPDIPQLTGALGAALYAFDE 255 (276)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHC---CCSSEEEESGGGGCHHHHHHHHHHHTSCEECCSSGGGHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhcc---cCCeEEEecCccchHHHHHHHHHHHCCCeeeCCCcchHHHHHHHHHHHHH
Confidence 6899999999999877766554442 4678999999999999999999999999999874 458899999998754
No 41
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=97.54 E-value=0.00033 Score=71.61 Aligned_cols=75 Identities=16% Similarity=0.123 Sum_probs=60.1
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEecC-CcchhhHHHHHHHHhC------CceEEecCCC-chhHHHH
Q 008692 417 FDPPSEVRALVEGQFLSMRGHAERFGLPSPPRRIIATGG-ASANQTILSCLASIYG------CDIYTVQRPD-SASLGAA 488 (557)
Q Consensus 417 ~~~~~l~rAvlEgia~~~r~~~~~l~~~~~~~~i~~~GG-ga~s~~w~Qi~Advlg------~pv~~~~~~e-~~alGAA 488 (557)
.+++|++++++..|+..+..+.-...+...+++|+++|| .++|+..+++++..++ +++..++..+ .+|+|||
T Consensus 276 ~~~eDIa~gll~sVa~~I~~lA~l~A~~~~i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlGAa 355 (360)
T 2i7n_A 276 ISKEDLARATLVTITNNIGSIARMCALNENIDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVGAL 355 (360)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHHHH
Confidence 479999999999999998776431111123457999999 8999999999999985 7888887554 8999999
Q ss_pred HHH
Q 008692 489 LRA 491 (557)
Q Consensus 489 ~lA 491 (557)
+.+
T Consensus 356 L~~ 358 (360)
T 2i7n_A 356 LEL 358 (360)
T ss_dssp HHH
T ss_pred HHh
Confidence 986
No 42
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=97.41 E-value=0.00015 Score=73.67 Aligned_cols=79 Identities=11% Similarity=0.173 Sum_probs=54.6
Q ss_pred CCCCCcEEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhh
Q 008692 5 SLPKDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSK 84 (557)
Q Consensus 5 ~~~~~~~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~ 84 (557)
.+....++||||+|.|.+|++++|.+|+++.+.+.+.+. .+++ .+.+.+.+.++++..
T Consensus 19 ~~~~~~~~lgiDiGgt~i~~~l~d~~g~il~~~~~~~~~------------~~~~----------~~~~~i~~~i~~~~~ 76 (327)
T 2ap1_A 19 YFQSNAMYYGFDIGGTKIALGVFDSTRRLQWEKRVPTPH------------TSYS----------AFLDAVCELVEEADQ 76 (327)
T ss_dssp ----CCEEEEEEECSSEEEEEEEETTCCEEEEEEEECCC------------SCHH----------HHHHHHHHHHHHHHH
T ss_pred EEcCCceEEEEEECCCEEEEEEEeCCCCEEEEEEecCCC------------CCHH----------HHHHHHHHHHHHHHH
Confidence 445557899999999999999999999999887665431 1233 677777777777654
Q ss_pred cCCCCCeeEEEEeccccceEEEcCC-Cc
Q 008692 85 SLDLSKVTAVSGSGQQHGSVYWKKG-SA 111 (557)
Q Consensus 85 ~~~~~~I~aIgis~~~~~~v~vD~~-g~ 111 (557)
.. ..|.+|||+..+ ++|.+ |.
T Consensus 77 ~~--~~i~~igi~~pG----~vd~~~g~ 98 (327)
T 2ap1_A 77 RF--GVKGSVGIGIPG----MPETEDGT 98 (327)
T ss_dssp HH--TSCCEEEEEESS----BSCCTTSC
T ss_pred hc--CCccEEEEEeee----eEECCCCE
Confidence 31 247778887766 56654 44
No 43
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=97.41 E-value=5.2e-05 Score=78.42 Aligned_cols=77 Identities=9% Similarity=-0.010 Sum_probs=53.4
Q ss_pred CCcEEEEEEccCCceEEEEEcCCCCEEEEE-eeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhcC
Q 008692 8 KDSLFLGFDSSTQSLKATVLDSNLNIVASE-QLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSL 86 (557)
Q Consensus 8 ~~~~~lgIDiGTts~Ka~l~d~~G~~v~~~-~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~~ 86 (557)
+..++||||+|.|++|++++| +|+++.+. +.+.+ .. +++ .+.+.+.+.++.+.+..
T Consensus 7 d~~~~lgiDIGgt~i~~~l~d-~G~il~~~~~~~~~-----------~~-~~~----------~~l~~i~~~~~~i~~~~ 63 (366)
T 3mcp_A 7 DNRIVMTLDAGGTNFVFSAIQ-GGKEIADPVVLPAC-----------AD-CLD----------KCLGNLVEGFKAIQAGL 63 (366)
T ss_dssp CCCEEEEEECSSSEEEEEEEE-TTEECSCCEEEECC-----------TT-CHH----------HHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECcceEEEEEEE-CCEEEEEEEEEECC-----------CC-CHH----------HHHHHHHHHHHHHHHHh
Confidence 446899999999999999999 99988765 44442 11 444 77777777222222212
Q ss_pred CCCCeeEEEEeccccceEEEcC-CCcc
Q 008692 87 DLSKVTAVSGSGQQHGSVYWKK-GSAT 112 (557)
Q Consensus 87 ~~~~I~aIgis~~~~~~v~vD~-~g~p 112 (557)
. .+|.+|||+..+ ++|. +|..
T Consensus 64 ~-~~i~gIGIavPG----~Vd~~~G~i 85 (366)
T 3mcp_A 64 P-EAPVAISFAFPG----PADYQAGII 85 (366)
T ss_dssp S-SCCCEEEEECCS----SEETTTTEE
T ss_pred h-cCCeEEEEEecc----eEeCCCCEE
Confidence 2 679999999877 6775 4654
No 44
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=97.34 E-value=0.00027 Score=70.51 Aligned_cols=68 Identities=12% Similarity=0.083 Sum_probs=48.7
Q ss_pred EEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhcCCCCC
Q 008692 11 LFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDLSK 90 (557)
Q Consensus 11 ~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~~~~~~ 90 (557)
++||||+|.|++|++++|.+|+++.+.+.+.+ .+++ .+.+.+.+.+++ .+
T Consensus 5 ~~lgidiggt~i~~~l~d~~g~il~~~~~~~~-------------~~~~----------~~~~~i~~~i~~-------~~ 54 (292)
T 2gup_A 5 TIATIDIGGTGIKFASLTPDGKILDKTSISTP-------------ENLE----------DLLAWLDQRLSE-------QD 54 (292)
T ss_dssp CEEEEEEETTEEEEEEECTTCCEEEEEEECCC-------------SSHH----------HHHHHHHHHHTT-------SC
T ss_pred EEEEEEECCCEEEEEEECCCCCEEEEEEEeCC-------------CCHH----------HHHHHHHHHHHh-------CC
Confidence 58999999999999999999999987655432 1233 565555444432 46
Q ss_pred eeEEEEeccccceEEEcCC-Ccc
Q 008692 91 VTAVSGSGQQHGSVYWKKG-SAT 112 (557)
Q Consensus 91 I~aIgis~~~~~~v~vD~~-g~p 112 (557)
|.+|||+..+ ++|.+ |..
T Consensus 55 i~gigi~~pG----~vd~~~g~v 73 (292)
T 2gup_A 55 YSGIAMSVPG----AVNQETGVI 73 (292)
T ss_dssp CSEEEEEESS----EECTTTCBE
T ss_pred CcEEEEEecC----cccCCCCEE
Confidence 8889988876 67864 643
No 45
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=97.28 E-value=0.00016 Score=72.02 Aligned_cols=69 Identities=17% Similarity=0.237 Sum_probs=48.8
Q ss_pred EEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhcCCCCC
Q 008692 11 LFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDLSK 90 (557)
Q Consensus 11 ~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~~~~~~ 90 (557)
++||||+|.|++|++++|.+|+++.+.+.+.+. ..+++ ++.+.+.+.++++.+ +
T Consensus 2 ~~lgidiggt~~~~~l~d~~g~il~~~~~~~~~-----------~~~~~----------~~~~~i~~~i~~~~~-----~ 55 (289)
T 2aa4_A 2 TTLAIDIGGTKLAAALIGADGQIRDRRELPTPA-----------SQTPE----------ALRDALSALVSPLQA-----H 55 (289)
T ss_dssp CEEEEEECSSEEEEEEECTTCCEEEEEEEECCS-----------SCCHH----------HHHHHHHHHHTTTGG-----G
T ss_pred eEEEEEeCCCEEEEEEECCCCCEEEEEEecCCC-----------CCCHH----------HHHHHHHHHHHHHHh-----h
Confidence 589999999999999999999999887766531 11344 777777776665543 2
Q ss_pred eeEEEEeccccceEEEcCC
Q 008692 91 VTAVSGSGQQHGSVYWKKG 109 (557)
Q Consensus 91 I~aIgis~~~~~~v~vD~~ 109 (557)
+.+|||+..+ ++|.+
T Consensus 56 ~~~igi~~pG----~vd~~ 70 (289)
T 2aa4_A 56 AQRVAIASTG----IIRDG 70 (289)
T ss_dssp CSEEEEEESS----EEETT
T ss_pred CCEEEEEecc----ceeCC
Confidence 3456666655 66654
No 46
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=97.10 E-value=0.00016 Score=72.23 Aligned_cols=69 Identities=17% Similarity=-0.003 Sum_probs=47.5
Q ss_pred EEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhcCCCCC
Q 008692 11 LFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDLSK 90 (557)
Q Consensus 11 ~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~~~~~~ 90 (557)
++||||+|.|++|++++| +|+++.+.+.+... + ..++++ .+.+.+.++++++.. ....+
T Consensus 1 ~~lgiDiGGT~~~~~l~d-~g~il~~~~~~~~~--~-------~~~~~~----------~~~~~i~~~i~~~~~-~~~~~ 59 (291)
T 1zbs_A 1 MILIGDSGSTKTDWCIAK-EGKSLGRFQTSGIN--P-------FQQDRN----------EIDTALRSEVLPAIG-QKASS 59 (291)
T ss_dssp CEEEEEECSSEEEEEEEE-TTEEEEEEEEECCC--T-------TTSCHH----------HHHHHHTTTTHHHHT-TSTTT
T ss_pred CEEEEEeCccceEEEEEe-CCeEEEEEECCCCC--c-------ccCCHH----------HHHHHHHHHHHHHhC-CCccc
Confidence 379999999999999999 99999877653210 0 112344 677777777765432 13456
Q ss_pred eeEEEEeccc
Q 008692 91 VTAVSGSGQQ 100 (557)
Q Consensus 91 I~aIgis~~~ 100 (557)
|.+|+|+.-+
T Consensus 60 i~~igig~pG 69 (291)
T 1zbs_A 60 IRAVYFYGAG 69 (291)
T ss_dssp CCEEEEEETT
T ss_pred ccEEEEECCC
Confidence 8888887755
No 47
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=97.00 E-value=0.00067 Score=74.88 Aligned_cols=77 Identities=19% Similarity=0.229 Sum_probs=65.4
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHcCC-CCCCCEEEEecCCcchhhHHHHHHHHhCCceEEec-CCCchhHHHHHHHHhc
Q 008692 418 DPPSEVRALVEGQFLSMRGHAERFGL-PSPPRRIIATGGASANQTILSCLASIYGCDIYTVQ-RPDSASLGAALRAAHG 494 (557)
Q Consensus 418 ~~~~l~rAvlEgia~~~r~~~~~l~~-~~~~~~i~~~GGga~s~~w~Qi~Advlg~pv~~~~-~~e~~alGAA~lA~~a 494 (557)
.-+++++.+++.+.-.++..++.... ...++.|+++||++++|.+.+++.+.||+++.... ..++.|+|||+.|+.-
T Consensus 304 ~~e~l~~~~~~~i~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAai~a~~l 382 (605)
T 4b9q_A 304 KLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVL 382 (605)
T ss_dssp HHHHHHHHHHHHTTHHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHHTSCCCSSSCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHhccCcCCCcChhHHHHHhHHHHHHHh
Confidence 46677888889888888888887653 35689999999999999999999999999887644 5679999999999875
No 48
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=96.95 E-value=0.00012 Score=73.09 Aligned_cols=29 Identities=17% Similarity=0.086 Sum_probs=23.6
Q ss_pred EEEEEEccCCceEEEEEcCCCCEEEEEeee
Q 008692 11 LFLGFDSSTQSLKATVLDSNLNIVASEQLQ 40 (557)
Q Consensus 11 ~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~ 40 (557)
++||||+|.|++|++++| +|+++.+.+.+
T Consensus 1 ~~lgiDiGGT~i~~~l~d-~g~il~~~~~~ 29 (291)
T 1zxo_A 1 MILIADSGSTKTDWCVVL-NGAVIKRLGTK 29 (291)
T ss_dssp ---CEECCTTCEEEEEEC-SSSEEEEEEEC
T ss_pred CEEEEEeccccEEEEEEc-CCeEEEEEECC
Confidence 479999999999999999 99999877553
No 49
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=96.93 E-value=0.0014 Score=68.42 Aligned_cols=76 Identities=22% Similarity=0.275 Sum_probs=61.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHcCC-CCCCCEEEEecCCcchhhHHHHHHHHhCCceEE---------ecCCCchhHHHH
Q 008692 419 PPSEVRALVEGQFLSMRGHAERFGL-PSPPRRIIATGGASANQTILSCLASIYGCDIYT---------VQRPDSASLGAA 488 (557)
Q Consensus 419 ~~~l~rAvlEgia~~~r~~~~~l~~-~~~~~~i~~~GGga~s~~w~Qi~Advlg~pv~~---------~~~~e~~alGAA 488 (557)
-+++++.+++.+.-.++..++.... ...++.|+++||++++|.+.+++.+.|+.++.+ .+..++.|+|||
T Consensus 316 ~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa 395 (409)
T 4gni_A 316 YETIARTVFEGFNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAA 395 (409)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHH
Confidence 4566777888888777777776543 346899999999999999999999999998543 456689999999
Q ss_pred HHHHhc
Q 008692 489 LRAAHG 494 (557)
Q Consensus 489 ~lA~~a 494 (557)
+.|+.-
T Consensus 396 ~~~~~~ 401 (409)
T 4gni_A 396 LQASLI 401 (409)
T ss_dssp HHHHHH
T ss_pred HHhhhh
Confidence 999865
No 50
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=96.92 E-value=0.0013 Score=68.27 Aligned_cols=76 Identities=17% Similarity=0.194 Sum_probs=62.6
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHcCC-CCCCCEEEEecCCcchhhHHHHHHHHh-CCceEEe-cCCCchhHHHHHHHHh
Q 008692 418 DPPSEVRALVEGQFLSMRGHAERFGL-PSPPRRIIATGGASANQTILSCLASIY-GCDIYTV-QRPDSASLGAALRAAH 493 (557)
Q Consensus 418 ~~~~l~rAvlEgia~~~r~~~~~l~~-~~~~~~i~~~GGga~s~~w~Qi~Advl-g~pv~~~-~~~e~~alGAA~lA~~ 493 (557)
.-+++++..++.+.-.++..++.... ...++.|+++||++++|.+.+.+.+.| +.+|... +..++.|+|||+.|+.
T Consensus 314 ~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ 392 (394)
T 3qfu_A 314 KFEELNLDLFKKTLKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGV 392 (394)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHh
Confidence 35666777888888888887776543 346799999999999999999999999 8888776 4667899999999875
No 51
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=96.83 E-value=0.0029 Score=62.35 Aligned_cols=30 Identities=30% Similarity=0.485 Sum_probs=26.8
Q ss_pred EEEEEEccCCceEEEEEcCCCCEEEEEeee
Q 008692 11 LFLGFDSSTQSLKATVLDSNLNIVASEQLQ 40 (557)
Q Consensus 11 ~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~ 40 (557)
|+||||+|||++|++++|.+++++.+...+
T Consensus 2 ~~lGID~GsT~tk~av~d~~~~il~~~~~~ 31 (276)
T 4ehu_A 2 YTMGLDIGSTASKGVILKNGEDIVASETIS 31 (276)
T ss_dssp EEEEEEECSSCEEEEEEETTTEEEEEEEES
T ss_pred eEEEEEcCccEEEEEEEECCCeEEEEEEec
Confidence 799999999999999999999998776543
No 52
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=96.78 E-value=0.0016 Score=67.88 Aligned_cols=76 Identities=18% Similarity=0.233 Sum_probs=61.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHcCC-CCCCCEEEEecCCcchhhHHHHHHHHh-CCceEEe-cCCCchhHHHHHHHHhc
Q 008692 419 PPSEVRALVEGQFLSMRGHAERFGL-PSPPRRIIATGGASANQTILSCLASIY-GCDIYTV-QRPDSASLGAALRAAHG 494 (557)
Q Consensus 419 ~~~l~rAvlEgia~~~r~~~~~l~~-~~~~~~i~~~GGga~s~~w~Qi~Advl-g~pv~~~-~~~e~~alGAA~lA~~a 494 (557)
-+++++.+++.+.-.++..++.... ...++.|+++||++++|.+.+++.+.| +.+|... +..++.|+|||+.|+.-
T Consensus 323 ~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l 401 (404)
T 3i33_A 323 FEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAIL 401 (404)
T ss_dssp HHHHTHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHHh
Confidence 4566677777777777777776543 346899999999999999999999999 8888776 45678999999999864
No 53
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=96.74 E-value=0.0011 Score=68.60 Aligned_cols=110 Identities=14% Similarity=0.035 Sum_probs=67.9
Q ss_pred CcEEEEEEccCCceEEEEEcC----CCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhh
Q 008692 9 DSLFLGFDSSTQSLKATVLDS----NLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSK 84 (557)
Q Consensus 9 ~~~~lgIDiGTts~Ka~l~d~----~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~ 84 (557)
++++||||+|.|++|++++|. +|+++...+. ++. .+++ .+.+.+.+.++++..
T Consensus 28 ~~~~lgiDiGgt~i~~~l~d~~~~~~g~il~~~~~-~~~------------~~~~----------~~~~~i~~~i~~~~~ 84 (373)
T 2q2r_A 28 APLTFVGDVGGTSARMGFVREGKNDSVHACVTRYS-MKR------------KDIT----------EIIEFFNEIIELMPA 84 (373)
T ss_dssp SCEEEEEEECSSEEEEEEEEECGGGCEEEEEEEEE-CTT------------CBGG----------GHHHHHHHHHHHSCH
T ss_pred CCeEEEEEEccccEEEEEEecccCCCccEEEEeee-cCC------------CCHH----------HHHHHHHHHHHHHhh
Confidence 468999999999999999998 8998876541 221 1344 677777777766432
Q ss_pred cCCCCCeeEEEEeccccceEEEcCCCccccccCC-CCC-CcccccccccCCCCCccccCCCcHHH
Q 008692 85 SLDLSKVTAVSGSGQQHGSVYWKKGSATILSSLD-PKK-PLVDQLGDAFSTKESPVWMDSSTTAQ 147 (557)
Q Consensus 85 ~~~~~~I~aIgis~~~~~~v~vD~~g~pl~~~~d-~~~-pl~~~l~~~~~l~~~i~w~D~Ra~~~ 147 (557)
. .+.+|.+|||+..+ ++|. |.......+ ... +|++.++..|.+.|+.+=+|.++...
T Consensus 85 ~-~~~~i~gigi~~pG----~vd~-g~v~~~~~~~~~~~~l~~~l~~~~~~~pv~v~NDa~aaal 143 (373)
T 2q2r_A 85 S-VMKRVKAGVINVPG----PVTG-GAVGGPFNNLKGIARLSDYPKALFPPGHSAILNDLEAGGF 143 (373)
T ss_dssp H-HHTTEEEEEEEESS----CEET-TTEECCCSSSBSCEEGGGSCTTTSCTTSEEEEEHHHHHHH
T ss_pred c-ccccccEEEEEeec----cccC-CEEeccCCCCCCcCCHHHHHHHhcCCCCEEEEccHhHHhc
Confidence 1 12468888888776 5565 543200111 112 55555555554446666666655443
No 54
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=96.58 E-value=0.003 Score=65.31 Aligned_cols=75 Identities=20% Similarity=0.241 Sum_probs=58.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHcCC-CCCCCEEEEecCCcchhhHHHHHHHHhCCceEEec-CCCchhHHHHHHHHh
Q 008692 419 PPSEVRALVEGQFLSMRGHAERFGL-PSPPRRIIATGGASANQTILSCLASIYGCDIYTVQ-RPDSASLGAALRAAH 493 (557)
Q Consensus 419 ~~~l~rAvlEgia~~~r~~~~~l~~-~~~~~~i~~~GGga~s~~w~Qi~Advlg~pv~~~~-~~e~~alGAA~lA~~ 493 (557)
-..+++..++.+.-.++..++.... ...++.|+++||+++.|.+.+.+.+.|+.++.... ..++.|+|||+.|+.
T Consensus 305 ~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~ 381 (383)
T 1dkg_D 305 LESLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGV 381 (383)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHhCCCCCCCcChHHHHHHHHHHHHHh
Confidence 3445566777776666666665432 34679999999999999999999999999887654 556899999998863
No 55
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=96.34 E-value=0.0028 Score=64.39 Aligned_cols=31 Identities=13% Similarity=0.075 Sum_probs=25.4
Q ss_pred CCcEEEEEEccCCceEEEEEc-CCCCEEEEEe
Q 008692 8 KDSLFLGFDSSTQSLKATVLD-SNLNIVASEQ 38 (557)
Q Consensus 8 ~~~~~lgIDiGTts~Ka~l~d-~~G~~v~~~~ 38 (557)
.+.|+||||+|.|++|++++| .+|+++...+
T Consensus 12 ~~~~~lgiDiGGT~i~~~l~dl~~g~i~~~~~ 43 (332)
T 1sz2_A 12 STKYALVGDVGGTNARLALCDIASGEISQAKT 43 (332)
T ss_dssp --CEEEEEEEETTEEEEEEEETTTCCEEEEEE
T ss_pred CCCEEEEEEechhheEEEEEECCCCcEEEEEE
Confidence 457999999999999999999 4799886543
No 56
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=95.94 E-value=0.0078 Score=64.88 Aligned_cols=76 Identities=18% Similarity=0.234 Sum_probs=58.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHcCC-CCCCCEEEEecCCcchhhHHHHHHHHhCCceEEe-cCCCchhHHHHHHHHhc
Q 008692 419 PPSEVRALVEGQFLSMRGHAERFGL-PSPPRRIIATGGASANQTILSCLASIYGCDIYTV-QRPDSASLGAALRAAHG 494 (557)
Q Consensus 419 ~~~l~rAvlEgia~~~r~~~~~l~~-~~~~~~i~~~GGga~s~~w~Qi~Advlg~pv~~~-~~~e~~alGAA~lA~~a 494 (557)
-+.+++.+++.+.-.++..++.... ...++.|+++||+++.|.+.+.+.+.|+.++... +..++.|+|||+.|+.-
T Consensus 274 fe~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~aVa~Gaa~~a~~l 351 (509)
T 2v7y_A 274 FEELSAHLVERTMGPVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAIGAAIQGGVI 351 (509)
T ss_dssp HHHHTHHHHHTTHHHHHHHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHHSSCCBCCSCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCChhHCcEEEEECCcccChHHHHHHHHHhCCCcCcCCCchhhhHhhHHHHHHHh
Confidence 3455566667666666666665542 2468999999999999999999999999887654 45678899999999753
No 57
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=95.93 E-value=0.012 Score=62.39 Aligned_cols=74 Identities=8% Similarity=-0.043 Sum_probs=49.9
Q ss_pred cEEEEEEccCCceEEEEEcCCCCE---EEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhc-
Q 008692 10 SLFLGFDSSTQSLKATVLDSNLNI---VASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS- 85 (557)
Q Consensus 10 ~~~lgIDiGTts~Ka~l~d~~G~~---v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~- 85 (557)
..+||||+|.|++|++++|.+|++ +.....+.| .+. ..-+++ ++++.+.++++++.+.
T Consensus 61 G~~laiDlGGTnirv~lV~~~G~~~~~~~~~~~~ip----~~~----~~~~~~----------~lfd~Ia~~i~~~~~~~ 122 (457)
T 2yhx_A 61 GSFLAIVMGGGDLEVILISLAGRQESSIXASRSLAA----AMS----TTAIPS----------DLWGNXAXSNAAFSSXE 122 (457)
T ss_dssp EEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCT----TTT----SCSCTH----------HHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEeCCCeEEEEEEEeCCCeeEEEeeEEEEcC----Ccc----CCCCHH----------HHHHHHHHHHHHHHhhc
Confidence 478999999999999999999998 444433332 210 112445 8999999999887653
Q ss_pred -CC-CCC-eeEEEEecccc
Q 008692 86 -LD-LSK-VTAVSGSGQQH 101 (557)
Q Consensus 86 -~~-~~~-I~aIgis~~~~ 101 (557)
.. .+. +.||+||..+.
T Consensus 123 ~~~~~~~~~lGi~fs~P~~ 141 (457)
T 2yhx_A 123 FSSXAGSVPLGFTFXEAGA 141 (457)
T ss_dssp TSSCSSCEEEEEECCSCCC
T ss_pred ccccccccceeeEEEEEEE
Confidence 21 122 56777777553
No 58
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=95.85 E-value=0.0049 Score=59.08 Aligned_cols=66 Identities=12% Similarity=0.009 Sum_probs=41.2
Q ss_pred CcEEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhcCCC
Q 008692 9 DSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDL 88 (557)
Q Consensus 9 ~~~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~~~~ 88 (557)
..++||||+|.|++| ++|.+|++. .+.+.+ ...+++ .+.+.+.+. .+.
T Consensus 5 ~~~~lgiDIGGT~i~--~~d~~g~~~--~~~~t~-----------~~~~~~----------~~~~~i~~~----i~~--- 52 (226)
T 3lm2_A 5 DQTVLAIDIGGSHVK--IGLSTDGEE--RKVESG-----------KTMTGP----------EMVAAVTAM----AKD--- 52 (226)
T ss_dssp GCCEEEEEECSSEEE--EEETTTCCE--EEEECC-----------TTCCHH----------HHHHHHHHH----TTT---
T ss_pred CCEEEEEEECCCEEE--EEECCCCEE--EEEECC-----------CCCCHH----------HHHHHHHHH----HHh---
Confidence 358999999999999 578888862 222321 112333 555444333 222
Q ss_pred CCeeEEEEeccccceEEEcCCC
Q 008692 89 SKVTAVSGSGQQHGSVYWKKGS 110 (557)
Q Consensus 89 ~~I~aIgis~~~~~~v~vD~~g 110 (557)
.+|.+|||+..+ ++|.++
T Consensus 53 ~~i~gigi~~pG----~Vd~~~ 70 (226)
T 3lm2_A 53 MTYDVIAMGYPG----PVVHNK 70 (226)
T ss_dssp CCCSEEEEEESS----CEETTE
T ss_pred CCCCEEEEEEEe----EEECCe
Confidence 268899998876 667654
No 59
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=95.82 E-value=0.0081 Score=67.01 Aligned_cols=76 Identities=17% Similarity=0.183 Sum_probs=59.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHcCC-CCCCCEEEEecCCcchhhHHHHHHHHhCCceEEe-cCCCchhHHHHHHHHhc
Q 008692 419 PPSEVRALVEGQFLSMRGHAERFGL-PSPPRRIIATGGASANQTILSCLASIYGCDIYTV-QRPDSASLGAALRAAHG 494 (557)
Q Consensus 419 ~~~l~rAvlEgia~~~r~~~~~l~~-~~~~~~i~~~GGga~s~~w~Qi~Advlg~pv~~~-~~~e~~alGAA~lA~~a 494 (557)
-+.+++.+++.+.-.++..++.... ...++.|+++||+++.|.+.+++.+.||+++... +..++.|+|||+.|+.-
T Consensus 306 fe~l~~~l~~~i~~~i~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAa~~a~~l 383 (675)
T 3d2f_A 306 LEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAIH 383 (675)
T ss_dssp HHHHTHHHHTTTTHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHHTSCEECCSCTTTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhcCCCccccCCcchHHHHHHHHHHHHh
Confidence 3445566666666666666665542 2468999999999999999999999999988654 46679999999999864
No 60
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=95.55 E-value=0.014 Score=63.53 Aligned_cols=75 Identities=19% Similarity=0.221 Sum_probs=58.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHcCC-CCCCCEEEEecCCcchhhHHHHHHHHhC-CceEEe-cCCCchhHHHHHHHHhc
Q 008692 420 PSEVRALVEGQFLSMRGHAERFGL-PSPPRRIIATGGASANQTILSCLASIYG-CDIYTV-QRPDSASLGAALRAAHG 494 (557)
Q Consensus 420 ~~l~rAvlEgia~~~r~~~~~l~~-~~~~~~i~~~GGga~s~~w~Qi~Advlg-~pv~~~-~~~e~~alGAA~lA~~a 494 (557)
++++..+++.+.-.++..++.... ...++.|+++||+++.|...+.+.+.|+ +++... +..++.|+|||+.|+.-
T Consensus 303 e~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l 380 (554)
T 1yuw_A 303 EELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAIL 380 (554)
T ss_dssp HHHTHHHHHHTTHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHh
Confidence 345566666666666666665432 2468999999999999999999999996 777654 56678999999999864
No 61
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=95.52 E-value=0.064 Score=54.73 Aligned_cols=103 Identities=12% Similarity=-0.033 Sum_probs=70.4
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEecCCcchhhHHHHHHHHhC-CceEEecCC-----CchhHHHHHHH
Q 008692 418 DPPSEVRALVEGQFLSMRGHAERFGLPSPPRRIIATGGASANQTILSCLASIYG-CDIYTVQRP-----DSASLGAALRA 491 (557)
Q Consensus 418 ~~~~l~rAvlEgia~~~r~~~~~l~~~~~~~~i~~~GGga~s~~w~Qi~Advlg-~pv~~~~~~-----e~~alGAA~lA 491 (557)
+++|+.+-+.|-.|.++.+.++.+.. ++++|+++|||++|+.+|+.++..+. .+|...+.. ---|+.-|.+|
T Consensus 257 s~~Dv~ATLt~~TA~sIa~~~~~~~~--~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~aFA~LA 334 (371)
T 3qbx_A 257 PAADIQATLLELSARSISESLLDAQP--DCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMAFAWLA 334 (371)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHCT--TCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhccC--CCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHHHHHHH
Confidence 78999999999999998888887642 46899999999999999999999985 777765531 22366667777
Q ss_pred HhccccccCCCCCCHHHHHhhhcccccceeecccc
Q 008692 492 AHGYLCSKKGSFVPISNMYKDKLEKTSLSCKLAVT 526 (557)
Q Consensus 492 ~~a~~~~~~G~~~~~~~a~~~~~~~~~~~~~P~~~ 526 (557)
...+ .|.-.++.......-....-.+.|...
T Consensus 335 ~~~l----~g~p~~lp~vTGA~~~~~lG~i~p~~~ 365 (371)
T 3qbx_A 335 HRFL----ERLPGNCPDVTGALGPRTLGALYPAGS 365 (371)
T ss_dssp HHHH----TTCCCSCHHHHCCSSCCCCCEEECC--
T ss_pred HHHH----cCCCCCCCcccCCCCCccCceeccCCC
Confidence 6654 444445544332211223344566643
No 62
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=95.39 E-value=0.015 Score=60.32 Aligned_cols=32 Identities=13% Similarity=0.287 Sum_probs=27.3
Q ss_pred cEEEEEEccCCceEEEEEcCCCCEEEEEeeecc
Q 008692 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQLQFD 42 (557)
Q Consensus 10 ~~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~ 42 (557)
+++||||+|.|++|++++|.+ +++.+.+.+++
T Consensus 2 ~~vlgidiGgt~ik~al~d~~-~il~~~~~~~~ 33 (381)
T 1saz_A 2 FRILTINPGSTSTKLSIFEDE-RMVKMQNFSHS 33 (381)
T ss_dssp CEEEEEEECSSEEEEEEEETT-EEEEEEEEECC
T ss_pred CeEEEEECCccceeEEEEecc-hheeeeecccC
Confidence 479999999999999999976 88887776653
No 63
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=95.22 E-value=0.0097 Score=68.63 Aligned_cols=73 Identities=15% Similarity=0.082 Sum_probs=48.1
Q ss_pred cEEEEEEccCCceEEEEEcCCCC----E-EEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhh
Q 008692 10 SLFLGFDSSTQSLKATVLDSNLN----I-VASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSK 84 (557)
Q Consensus 10 ~~~lgIDiGTts~Ka~l~d~~G~----~-v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~ 84 (557)
..+||||+|.|++|++++|.+|+ + +.+.+.+.| .+ ..+.+++ ++++.+.++++++.+
T Consensus 78 G~~laiDlGGTnirv~lv~~~G~~~~~i~~~~~~~~ip----~~----~~~~~~~----------~lf~~Ia~~i~~~l~ 139 (917)
T 1cza_N 78 GDFIALDLGGSSFRILRVQVNHEKNQNVHMESEVYDTP----EN----IVHGSGS----------QLFDHVAECLGDFME 139 (917)
T ss_dssp EEEEEEEESSSSEEEEEEEEEEETTEEEEEEEEEECCC----HH----HHSSBHH----------HHHHHHHHHHHHHHH
T ss_pred ceEEEEEeCCCeEEEEEEEecCCCcceEEEEEEEEECC----cc----cccCCHH----------HHHHHHHHHHHHHHH
Confidence 47899999999999999999876 4 444433332 11 0112334 899999999988754
Q ss_pred c--CCCCC-eeEEEEeccc
Q 008692 85 S--LDLSK-VTAVSGSGQQ 100 (557)
Q Consensus 85 ~--~~~~~-I~aIgis~~~ 100 (557)
. ...+. ..||++|..+
T Consensus 140 ~~~~~~~~~~lGi~fs~P~ 158 (917)
T 1cza_N 140 KRKIKDKKLPVGFTFSFPC 158 (917)
T ss_dssp HHTCTTSCCCEEEEECSCE
T ss_pred hcCCCCCcccEEEEEcccc
Confidence 3 22222 5678887754
No 64
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=95.15 E-value=0.02 Score=56.10 Aligned_cols=67 Identities=21% Similarity=0.132 Sum_probs=47.2
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHcCCC--C-CCCEEEEecCCcchhhHHHHHHHHhCCceEEecCCCchhHHHHHHHHh
Q 008692 418 DPPSEVRALVEGQFLSMRGHAERFGLP--S-PPRRIIATGGASANQTILSCLASIYGCDIYTVQRPDSASLGAALRAAH 493 (557)
Q Consensus 418 ~~~~l~rAvlEgia~~~r~~~~~l~~~--~-~~~~i~~~GGga~s~~w~Qi~Advlg~pv~~~~~~e~~alGAA~lA~~ 493 (557)
|...|-..++-|.+..+..+++++++. . +.-+|+++||.++ ++++. ..+..+ .++-+..|-.++.-.
T Consensus 186 T~~ai~sGi~~g~~g~i~~~i~~~~~~~~~~~~~~vi~TGG~a~------~l~~~-~~~~~~--~~~LvL~GL~~i~~~ 255 (266)
T 3djc_A 186 TIESIQSGVYYGVLGACKELIQRIHHEAFNGDQILILATGGFAS------LFDKQ-GLYDHL--VPDLVLQGIRLAAMM 255 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCEEEEEESTTGG------GGTTT-TCCSEE--CTTHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCEEEEECCChH------HhccC-CCCCEE--CcChHHHHHHHHHHh
Confidence 788888999999999998888877531 1 2357999999885 24444 444433 456788888777643
No 65
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=95.04 E-value=0.0082 Score=66.13 Aligned_cols=69 Identities=19% Similarity=0.263 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHHHcCC-CCCCCEEEEecCCcchhhHHHHHHHHhCCceEEe-cCCCchhHHHHHHHHhc
Q 008692 426 LVEGQFLSMRGHAERFGL-PSPPRRIIATGGASANQTILSCLASIYGCDIYTV-QRPDSASLGAALRAAHG 494 (557)
Q Consensus 426 vlEgia~~~r~~~~~l~~-~~~~~~i~~~GGga~s~~w~Qi~Advlg~pv~~~-~~~e~~alGAA~lA~~a 494 (557)
+++.+.-.++..++.... ...++.|+++||+++.|.+.+++.+.||+++... +..++.|+|||+.|+.-
T Consensus 312 ~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~fg~~~~~~~npd~aVA~GAa~~a~~l 382 (605)
T 2kho_A 312 LVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVL 382 (605)
T ss_dssp TTGGGTSHHHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhcCCCcCcCCCcchHHHHHHHHHHHHh
Confidence 444444445555554432 3568999999999999999999999999887654 46678999999999764
No 66
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=94.83 E-value=0.014 Score=59.33 Aligned_cols=74 Identities=22% Similarity=0.210 Sum_probs=54.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHcCCC--CC-C-CEEEEecCCcchhhHHHHHHHHhCCceEEec-CCCchhHHHHHHHHh
Q 008692 420 PSEVRALVEGQFLSMRGHAERFGLP--SP-P-RRIIATGGASANQTILSCLASIYGCDIYTVQ-RPDSASLGAALRAAH 493 (557)
Q Consensus 420 ~~l~rAvlEgia~~~r~~~~~l~~~--~~-~-~~i~~~GGga~s~~w~Qi~Advlg~pv~~~~-~~e~~alGAA~lA~~ 493 (557)
..+++..++.+.-.++..++..... .. + +.|+++||+++.|.+.+.+.+.|+.||.+.. ..++.++|||++|..
T Consensus 247 ~~~~~~~~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~ 325 (344)
T 1jce_A 247 REALRSVVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAGMVLDK 325 (344)
T ss_dssp HHHTHHHHHHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHHSSCEEECSSTTTHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHHCCCccccCChHHHHHHHHHHHHhC
Confidence 3455566666666666666543210 11 2 5799999999999999999999999998874 566889999998763
No 67
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=94.35 E-value=0.085 Score=53.48 Aligned_cols=84 Identities=15% Similarity=0.159 Sum_probs=62.2
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEecCCcchhhHHHHHHHHh---CCceEEec----CCCchhHHHHHH
Q 008692 418 DPPSEVRALVEGQFLSMRGHAERFGLPSPPRRIIATGGASANQTILSCLASIY---GCDIYTVQ----RPDSASLGAALR 490 (557)
Q Consensus 418 ~~~~l~rAvlEgia~~~r~~~~~l~~~~~~~~i~~~GGga~s~~w~Qi~Advl---g~pv~~~~----~~e~~alGAA~l 490 (557)
.++++.+++.+.++-.+...+....+...+++|.++||.+.|..+++.+.+.+ |.+|.+++ ...+.++|+|..
T Consensus 221 ~~~diAasfq~~l~~~l~~~~~~a~~~~g~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~ 300 (334)
T 3eno_A 221 AIEDISYSIQETAFAMLVEVLERALYVSGKDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAAL 300 (334)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHH
Confidence 46778888777777777666665432124589999999999999999999988 77888764 345778899887
Q ss_pred HHhccccccCCCCCCH
Q 008692 491 AAHGYLCSKKGSFVPI 506 (557)
Q Consensus 491 A~~a~~~~~~G~~~~~ 506 (557)
...- .|...+.
T Consensus 301 ~~~~-----~g~~~~~ 311 (334)
T 3eno_A 301 LMYK-----SGVRMSV 311 (334)
T ss_dssp HHHH-----TTCCCCG
T ss_pred HHHH-----cCCCCCc
Confidence 6665 5655443
No 68
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=94.20 E-value=0.19 Score=51.27 Aligned_cols=85 Identities=15% Similarity=0.155 Sum_probs=62.2
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEecCCcchhhHHHHHHHHh-CCceEEecCC-----CchhHHHHHHH
Q 008692 418 DPPSEVRALVEGQFLSMRGHAERFGLPSPPRRIIATGGASANQTILSCLASIY-GCDIYTVQRP-----DSASLGAALRA 491 (557)
Q Consensus 418 ~~~~l~rAvlEgia~~~r~~~~~l~~~~~~~~i~~~GGga~s~~w~Qi~Advl-g~pv~~~~~~-----e~~alGAA~lA 491 (557)
+++|+.+-+.|=.|.++.+.++.+. ..++|+++|||++|+.+|+.++..+ +.+|...+.- .--|+.-|.+|
T Consensus 264 ~~~Dv~ATLt~~TA~sIa~~~~~~~---~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aFA~LA 340 (370)
T 3cqy_A 264 NEEDIQSTLLDLTCHSIAQDILKLA---QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAFAWLA 340 (370)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHC---SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhcC---CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHHHHHH
Confidence 6889999999999999998887763 4569999999999999999999999 4566554321 22355566666
Q ss_pred HhccccccCCCCCCHHHH
Q 008692 492 AHGYLCSKKGSFVPISNM 509 (557)
Q Consensus 492 ~~a~~~~~~G~~~~~~~a 509 (557)
...+ .|.-.++...
T Consensus 341 ~~~l----~g~p~nlp~v 354 (370)
T 3cqy_A 341 MRYQ----LGLPANLPAV 354 (370)
T ss_dssp HHHH----TTCCCCCHHH
T ss_pred HHHH----cCCCCCCCcc
Confidence 6553 3444444443
No 69
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=94.19 E-value=0.042 Score=53.30 Aligned_cols=65 Identities=15% Similarity=0.071 Sum_probs=45.3
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEecCCcchhhHHHHHHHHhCCceEEecCCCchhHHHHHHH
Q 008692 418 DPPSEVRALVEGQFLSMRGHAERFGLPSPPRRIIATGGASANQTILSCLASIYGCDIYTVQRPDSASLGAALRA 491 (557)
Q Consensus 418 ~~~~l~rAvlEgia~~~r~~~~~l~~~~~~~~i~~~GGga~s~~w~Qi~Advlg~pv~~~~~~e~~alGAA~lA 491 (557)
|.+.|-..++-|.+..+..+++++++..+.-+|+++||.++. +++ +..+..+ .++-+..|-.++.
T Consensus 182 T~~ai~sGi~~g~~g~i~~~i~~~~~~~~~~~vi~TGG~a~~------l~~-~~~~~~~--~~~L~l~GL~~i~ 246 (249)
T 3bex_A 182 TEENIRLGVVNGSVYALEGIIGRIKEVYGDLPVVLTGGQSKI------VKD-MIKHEIF--DEDLTIKGVYHFC 246 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEESTTSGG------GGG-GSCCSEE--CTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCChHH------Hhc-CCCCcEE--CcCcHHHHHHHHH
Confidence 788888889999998888888877531134579999998853 456 6555444 3456666766554
No 70
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=94.17 E-value=0.079 Score=56.01 Aligned_cols=70 Identities=9% Similarity=0.027 Sum_probs=44.1
Q ss_pred cEEEEEEccCCceEEEEEcCCC-CE---EEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhc
Q 008692 10 SLFLGFDSSTQSLKATVLDSNL-NI---VASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS 85 (557)
Q Consensus 10 ~~~lgIDiGTts~Ka~l~d~~G-~~---v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~ 85 (557)
..+||||+|.|++|+++++.+| +- +.....+.|. +- ...+++ ++++.+.++++++.+.
T Consensus 68 G~~lalDlGGTn~Rv~~V~l~G~~~~~~i~~~~~~ip~----~~----~~~~~~----------~lfd~Ia~~i~~~l~~ 129 (451)
T 1bdg_A 68 GNFLALDLGGTNYRVLSVTLEGKGKSPRIQERTYCIPA----EK----MSGSGT----------ELFKYIAETLADFLEN 129 (451)
T ss_dssp EEEEEEEESSSSEEEEEEEECC-CCCCEEEEEEECCCT----TT----TTSBHH----------HHHHHHHHHHHHHHHH
T ss_pred ceEEEEEeCCCeEEEEEEecCCCCcceEEEEEEEecCC----cc----cCCCHH----------HHHHHHHHHHHHHHHh
Confidence 4789999999999999999998 51 2122223321 10 111233 8999999999887653
Q ss_pred --CCCCCeeEEEEec
Q 008692 86 --LDLSKVTAVSGSG 98 (557)
Q Consensus 86 --~~~~~I~aIgis~ 98 (557)
... +...|||+.
T Consensus 130 ~~~~~-~~~~lG~tf 143 (451)
T 1bdg_A 130 NGMKD-KKFDLGFTF 143 (451)
T ss_dssp TTCCS-SCEEEEEEE
T ss_pred cCCCc-cccceEEEE
Confidence 222 335555554
No 71
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=93.99 E-value=0.078 Score=54.35 Aligned_cols=61 Identities=21% Similarity=0.252 Sum_probs=50.8
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHcC--C-CCCCCEEEEecCCcchhhHHHHHHHHhCCceEEec
Q 008692 418 DPPSEVRALVEGQFLSMRGHAERFG--L-PSPPRRIIATGGASANQTILSCLASIYGCDIYTVQ 478 (557)
Q Consensus 418 ~~~~l~rAvlEgia~~~r~~~~~l~--~-~~~~~~i~~~GGga~s~~w~Qi~Advlg~pv~~~~ 478 (557)
.-.++++..++.+.-.++..++... . ...++.|+++||+++.+.+.+++++.|+.||.+..
T Consensus 275 ~~~~~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~~~v~~~~ 338 (377)
T 2ych_A 275 RIYDAIRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLGVNLEPVN 338 (377)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHTSEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhCCCeEecC
Confidence 4567788889999988888888542 1 35789999999999999999999999999999863
No 72
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=93.83 E-value=0.11 Score=52.49 Aligned_cols=77 Identities=16% Similarity=0.176 Sum_probs=60.3
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEecCCcchhhHHHHHHHHh---CCceEEec----CCCchhHHHHHH
Q 008692 418 DPPSEVRALVEGQFLSMRGHAERFGLPSPPRRIIATGGASANQTILSCLASIY---GCDIYTVQ----RPDSASLGAALR 490 (557)
Q Consensus 418 ~~~~l~rAvlEgia~~~r~~~~~l~~~~~~~~i~~~GGga~s~~w~Qi~Advl---g~pv~~~~----~~e~~alGAA~l 490 (557)
.++++++++.+.++-.+...++.+.+....++|.++||.+.|..+++.+.+.+ |.+|.+++ ...+.++|+|..
T Consensus 216 ~~~diAa~fq~~l~~~l~~~~~~~~~~~~~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~ 295 (330)
T 2ivn_A 216 RVEDLAYSFQETAFAALVEVTERAVAHTEKDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGL 295 (330)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHHHHHH
Confidence 57899999999988888777776532124679999999999999999999887 67777654 345778898887
Q ss_pred HHhc
Q 008692 491 AAHG 494 (557)
Q Consensus 491 A~~a 494 (557)
....
T Consensus 296 ~~~~ 299 (330)
T 2ivn_A 296 RMYK 299 (330)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6655
No 73
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=93.11 E-value=0.16 Score=55.82 Aligned_cols=76 Identities=16% Similarity=0.112 Sum_probs=62.7
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEecCCcchhhHHHHHHHHh-CCceEEec----CCCchhHHHHHHHH
Q 008692 418 DPPSEVRALVEGQFLSMRGHAERFGLPSPPRRIIATGGASANQTILSCLASIY-GCDIYTVQ----RPDSASLGAALRAA 492 (557)
Q Consensus 418 ~~~~l~rAvlEgia~~~r~~~~~l~~~~~~~~i~~~GGga~s~~w~Qi~Advl-g~pv~~~~----~~e~~alGAA~lA~ 492 (557)
+++++.+++.++++-.+...++.+.+...+++|.++||.++|..+++.+...+ |.+|..+. ...+.++|-|++|+
T Consensus 571 ~~~dIAasFh~ala~~L~~~~~ra~~~~g~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~ 650 (657)
T 3ttc_A 571 PVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAA 650 (657)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHH
Confidence 68999999999999988888876543345689999999999999999999998 78887643 44577899999886
Q ss_pred h
Q 008692 493 H 493 (557)
Q Consensus 493 ~ 493 (557)
.
T Consensus 651 ~ 651 (657)
T 3ttc_A 651 A 651 (657)
T ss_dssp H
T ss_pred H
Confidence 4
No 74
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=93.11 E-value=0.12 Score=57.99 Aligned_cols=77 Identities=17% Similarity=0.179 Sum_probs=61.6
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEecCCcchhhHHHHHHHHh---CCceEEec----CCCchhHHHHHH
Q 008692 418 DPPSEVRALVEGQFLSMRGHAERFGLPSPPRRIIATGGASANQTILSCLASIY---GCDIYTVQ----RPDSASLGAALR 490 (557)
Q Consensus 418 ~~~~l~rAvlEgia~~~r~~~~~l~~~~~~~~i~~~GGga~s~~w~Qi~Advl---g~pv~~~~----~~e~~alGAA~l 490 (557)
.++++.+++.++++-.+......+.+...+++|.++||.++|..+++.+.+.+ |.++..++ ...+.++|.|++
T Consensus 665 ~~~dIAasFq~ala~~L~~~~~~a~~~~g~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~ 744 (761)
T 3vth_A 665 EKSYISAKFHNTVVNFTYDLANLIRKETGINKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVI 744 (761)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHH
Confidence 68899999999988888877776543234689999999999999999998887 78888765 345678999999
Q ss_pred HHhc
Q 008692 491 AAHG 494 (557)
Q Consensus 491 A~~a 494 (557)
|+..
T Consensus 745 a~~~ 748 (761)
T 3vth_A 745 ANKI 748 (761)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8654
No 75
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=92.99 E-value=0.057 Score=59.02 Aligned_cols=86 Identities=12% Similarity=0.115 Sum_probs=53.4
Q ss_pred CcEEEEEEccCCceEEEEEcC-CCCEEEEEeeeccCCCCCCCCC-----CceeeCCCCCCCccCChhHHHHHHHHHHHHH
Q 008692 9 DSLFLGFDSSTQSLKATVLDS-NLNIVASEQLQFDSELPHYKTK-----DGVYRDPSNNGRIVSPTLMWIEALDLMLQKL 82 (557)
Q Consensus 9 ~~~~lgIDiGTts~Ka~l~d~-~G~~v~~~~~~~~~~~p~~g~~-----~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l 82 (557)
..|=|+||||||.+.+.|+|. +|+++++.+.-+|.... |-+ ..+.++|+ -.+..-..+.+.+.++++++
T Consensus 205 ~~~GlAvDiGTTtv~~~LvdL~tG~~l~~~~~~NpQ~~~--G~DVisRI~~a~~~~~---g~~~L~~~v~~~in~li~~l 279 (631)
T 3zyy_X 205 RVFGLAIDIGTTTVVVQLVDLVSGKVLGTKGNYNKQAAF--GDDVISRIIYVDENPD---GAEKLRKAVLSTINELIFQL 279 (631)
T ss_dssp CCEEEEEEECSSEEEEEEEETTTCCEEEEEEEECGGGGT--CSSHHHHHHHHHHCTT---HHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEecccceeEEEEECCCCCEEEeecccCCCCCc--chHHHHHHHHHhcCcc---cHHHHHHHHHHHHHHHHHHH
Confidence 347799999999999999995 69999999987774211 110 00112332 11111112444455556665
Q ss_pred hhc--CCCCCeeEEEEecc
Q 008692 83 SKS--LDLSKVTAVSGSGQ 99 (557)
Q Consensus 83 ~~~--~~~~~I~aIgis~~ 99 (557)
.+. +++++|..|.|.+.
T Consensus 280 ~~~~~i~~~~I~~~~v~GN 298 (631)
T 3zyy_X 280 CKEHGVEKKEIMAAVVAGN 298 (631)
T ss_dssp HHHHTCCGGGEEEEEEEEC
T ss_pred HHHcCCCHHHeeEEEEEcc
Confidence 543 67788988888763
No 76
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=92.97 E-value=0.11 Score=50.99 Aligned_cols=68 Identities=15% Similarity=0.122 Sum_probs=51.2
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHcCC--CCCCCEEEEecCCcchhhHHHHHHHHhCCceEEecCCCchhHHHHHHHHhc
Q 008692 418 DPPSEVRALVEGQFLSMRGHAERFGL--PSPPRRIIATGGASANQTILSCLASIYGCDIYTVQRPDSASLGAALRAAHG 494 (557)
Q Consensus 418 ~~~~l~rAvlEgia~~~r~~~~~l~~--~~~~~~i~~~GGga~s~~w~Qi~Advlg~pv~~~~~~e~~alGAA~lA~~a 494 (557)
|...|-..++-|.+..+..+++++++ + +.-+|+++||.+ ++++..+..+..+ .++-+..|-.+++..-
T Consensus 184 T~~ai~sGi~~g~~g~i~~~i~~~~~e~~-~~~~vi~TGG~a------~~l~~~~~~~~~~--~~~LvL~GL~~i~~~n 253 (268)
T 2h3g_X 184 TVSAMQSGILYGYVGQVEGIVKRMKEEAK-QEPKVIATGGLA------KLISEESNVIDVV--DPFLTLKGLYMLYERN 253 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCS-SCCEEEEESTTH------HHHHHHCSSCSEE--CTTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEECCCH------HHHHhhCCCCCEE--CcchHHHHHHHHHHhc
Confidence 78888899999999999888888763 3 345899999976 4567777766555 4567888888776543
No 77
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=92.92 E-value=0.23 Score=50.72 Aligned_cols=73 Identities=12% Similarity=0.083 Sum_probs=44.4
Q ss_pred CcEEEEEEccCCceEEEEEcCCCC--EEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhcC
Q 008692 9 DSLFLGFDSSTQSLKATVLDSNLN--IVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSL 86 (557)
Q Consensus 9 ~~~~lgIDiGTts~Ka~l~d~~G~--~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~~ 86 (557)
.+.++|||||||++|++++. +|+ +......++|. .+...+.-.|++ ...+++.+++++.- .
T Consensus 12 ~~~~vgiDiGt~~i~~~~~~-~~~~~i~~~g~~~~ps----~~~~~g~i~d~~----------~~~~~ik~~~~~~~--~ 74 (377)
T 2ych_A 12 RVEALGLEIGASALKLVEVS-GNPPALKALASRPTPP----GLLMEGMVAEPA----------ALAQEIKELLLEAR--T 74 (377)
T ss_dssp CCCCEEEEECSSEEEEEEEE-TTTTEEEEEEEEECCT----TSEETTEESCHH----------HHHHHHHHHHHHHT--C
T ss_pred CCceEEEEeCCCeEEEEEEe-CCceEEEEEEeEECCC----CcccCCCcCCHH----------HHHHHHHHHHHHcC--C
Confidence 45789999999999999996 665 44455555542 221123445665 77777777776531 2
Q ss_pred CCCCeeEEEEecc
Q 008692 87 DLSKVTAVSGSGQ 99 (557)
Q Consensus 87 ~~~~I~aIgis~~ 99 (557)
...+ ..+++++.
T Consensus 75 ~~~~-v~~~i~~~ 86 (377)
T 2ych_A 75 RKRY-VVTALSNL 86 (377)
T ss_dssp CCCE-EEEEECGG
T ss_pred Ccce-EEEEecCC
Confidence 2222 34566654
No 78
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=92.74 E-value=0.17 Score=50.65 Aligned_cols=66 Identities=11% Similarity=0.103 Sum_probs=47.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEecCCcchhhHHHHHHHHhCC---ceEEecC-CCchhHHHHHHH
Q 008692 421 SEVRALVEGQFLSMRGHAERFGLPSPPRRIIATGGASANQTILSCLASIYGC---DIYTVQR-PDSASLGAALRA 491 (557)
Q Consensus 421 ~l~rAvlEgia~~~r~~~~~l~~~~~~~~i~~~GGga~s~~w~Qi~Advlg~---pv~~~~~-~e~~alGAA~lA 491 (557)
+++++.++.++-.+...++.+ ..++.|+++||+|+- +.+.+.+.++. ++.++.. .++.|+|+++++
T Consensus 250 ~~i~~~~~~~~~~i~~~i~~~---~~~~~vvl~GGga~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 250 EAMNEALRKLEQRVLNTLNEF---SGYTHVMVIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp HHHHHHHHHHHHHHHHHHTTC---CCCCEEEEESTTHHH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhh---cCCCeEEEECChHHH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 345555555555554444332 357899999999975 88999999998 5776654 458899999865
No 79
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=91.09 E-value=0.23 Score=55.88 Aligned_cols=77 Identities=12% Similarity=0.112 Sum_probs=60.0
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEecCCcchhhHHHHHHHHh---CCceEEec----CCCchhHHHHHH
Q 008692 418 DPPSEVRALVEGQFLSMRGHAERFGLPSPPRRIIATGGASANQTILSCLASIY---GCDIYTVQ----RPDSASLGAALR 490 (557)
Q Consensus 418 ~~~~l~rAvlEgia~~~r~~~~~l~~~~~~~~i~~~GGga~s~~w~Qi~Advl---g~pv~~~~----~~e~~alGAA~l 490 (557)
+++++++++-+.++-.+...+..+.+...+++|.++||.+.|..+++.+.+.+ |..|.++. ...+.|+|.|++
T Consensus 677 ~~~dIAasfQ~al~~~L~~~~~~a~~~tg~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~i 756 (772)
T 4g9i_A 677 SPADIAYSAHLALARAFAHTAVERAREFGVKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFL 756 (772)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTTCSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHH
Confidence 67888888888888777776665543345789999999999999999998876 45666543 455779999999
Q ss_pred HHhc
Q 008692 491 AAHG 494 (557)
Q Consensus 491 A~~a 494 (557)
|+..
T Consensus 757 A~~~ 760 (772)
T 4g9i_A 757 GGLY 760 (772)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9876
No 80
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=90.77 E-value=0.21 Score=57.47 Aligned_cols=73 Identities=7% Similarity=0.063 Sum_probs=46.6
Q ss_pred CcEEEEEEccCCceEEEEEcCC-CC--EEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhc
Q 008692 9 DSLFLGFDSSTQSLKATVLDSN-LN--IVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS 85 (557)
Q Consensus 9 ~~~~lgIDiGTts~Ka~l~d~~-G~--~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~ 85 (557)
...+|+||+|.|++|+++++.+ |+ ++...+..+.+ |.+- ..-+.+ ++++.+.++++++.+.
T Consensus 525 ~G~~lalDlGGTn~Rv~~V~l~~g~~~~~~~~~~~~~i--p~~~----~~~~~~----------~lfd~Ia~~i~~~l~~ 588 (917)
T 1cza_N 525 NGDFLALDLGGTNFRVLLVKIRSGKKRTVEMHNKIYAI--PIEI----MQGTGE----------ELFDHIVSCISDFLDY 588 (917)
T ss_dssp CEEEEEEEESSSSEEEEEEEEECSTTCEEEEEEEEECC--CHHH----HTSBHH----------HHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEECCCcEEEEEEEeCCCcceeEEeeeeEEec--Cccc----ccCCHH----------HHHHHHHHHHHHHHHH
Confidence 3578999999999999999986 65 66554444443 2210 011223 7888888888886653
Q ss_pred --CCCCCeeEEEEec
Q 008692 86 --LDLSKVTAVSGSG 98 (557)
Q Consensus 86 --~~~~~I~aIgis~ 98 (557)
...+.+ .||||.
T Consensus 589 ~~~~~~~l-~lG~tf 602 (917)
T 1cza_N 589 MGIKGPRM-PLGFTF 602 (917)
T ss_dssp HTCCSSCC-EEEEEE
T ss_pred cCCCccce-eEEEEe
Confidence 333334 555554
No 81
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=89.76 E-value=0.44 Score=50.55 Aligned_cols=46 Identities=28% Similarity=0.284 Sum_probs=33.2
Q ss_pred EEEEecCCc-chhhHHHH----HHHHh--------CCceEEecCCCchhHHHHHHHHhc
Q 008692 449 RIIATGGAS-ANQTILSC----LASIY--------GCDIYTVQRPDSASLGAALRAAHG 494 (557)
Q Consensus 449 ~i~~~GGga-~s~~w~Qi----~Advl--------g~pv~~~~~~e~~alGAA~lA~~a 494 (557)
.|-+.|+.. +.|.+.+. +.+++ +.+|......+++.+|||++|+++
T Consensus 412 ~VgvdGSv~~~~P~f~~~~~~~l~~ll~~~~~~~~~~~v~l~~a~DGSg~GAAliAa~a 470 (485)
T 3o8m_A 412 HIAADGSVFNRYPGYKEKAAQALKDIYNWDVEKMEDHPIQLVAAEDGSGVGAAIIACLT 470 (485)
T ss_dssp EEEEESHHHHHSTTHHHHHHHHHHHHHTCCCCSGGGCSEEEEECCCTTTHHHHHHHHHH
T ss_pred EEEEecChhccCccHHHHHHHHHHHHhccccccCCCceEEEEEcCCChHHHHHHHHHHH
Confidence 355567765 45555554 44445 467888888899999999999998
No 82
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=89.41 E-value=0.39 Score=51.94 Aligned_cols=77 Identities=18% Similarity=0.131 Sum_probs=58.5
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEecCCcchhhHHHHHHHHhCC-ceEEec--CCCchhHHHHHHHHhc
Q 008692 418 DPPSEVRALVEGQFLSMRGHAERFGLPSPPRRIIATGGASANQTILSCLASIYGC-DIYTVQ--RPDSASLGAALRAAHG 494 (557)
Q Consensus 418 ~~~~l~rAvlEgia~~~r~~~~~l~~~~~~~~i~~~GGga~s~~w~Qi~Advlg~-pv~~~~--~~e~~alGAA~lA~~a 494 (557)
...++++++-+.++-.+...+..+.+...+++|.++||.+.|..+++.+....+. .|.++. ...+.++|+|+.+..-
T Consensus 279 ~~~dIAasfQ~~l~~~L~~~~~~a~~~tg~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~a~~~ 358 (576)
T 3ven_A 279 EYRDLAATAQAALERAVFGLADSVLARTGERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAAVAVE 358 (576)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHHHHTCSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHHHHHH
Confidence 3788888888888777777666543223468999999999999999988887665 666542 4467789999998754
No 83
>3t69_A Putative 2-dehydro-3-deoxygalactonokinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.55A {Sinorhizobium meliloti}
Probab=89.27 E-value=0.34 Score=48.63 Aligned_cols=47 Identities=13% Similarity=0.137 Sum_probs=36.6
Q ss_pred CCEEEEecCCcchhhHHHHHHHHhCCceEEecCCCchhHHHHHHHHhc
Q 008692 447 PRRIIATGGASANQTILSCLASIYGCDIYTVQRPDSASLGAALRAAHG 494 (557)
Q Consensus 447 ~~~i~~~GGga~s~~w~Qi~Advlg~pv~~~~~~e~~alGAA~lA~~a 494 (557)
...|.++|...-.....+.++ .+|.++...+..+++..|-..++...
T Consensus 259 ~~~V~LiG~~~L~~~Y~~AL~-~~G~~~~~~d~d~a~~~GL~~~a~~~ 305 (330)
T 3t69_A 259 VDGVCLVGSGGLGTLYRTALE-SQGLNVRAVDADEAVRAGLSAAARAI 305 (330)
T ss_dssp CCEEEEEECHHHHHHHHHHHH-HTTCEEEEEEHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEeCHHHHHHHHHHHH-HcCCCceeeCHHHHHHHHHHHHHHHH
Confidence 367999999999999988886 48999988876666667766655543
No 84
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=84.73 E-value=1.7 Score=43.57 Aligned_cols=73 Identities=14% Similarity=0.192 Sum_probs=42.7
Q ss_pred EEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhc--CCC
Q 008692 11 LFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS--LDL 88 (557)
Q Consensus 11 ~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~--~~~ 88 (557)
++||||.++..++++|++. |++++.....+. .+..|+ .|++ ..+ .=.+.+..+++++.+. ...
T Consensus 2 ~iLgIdts~~~~~val~~~-g~i~~~~~~~~~--~~~gg~------~p~~--~~~----~h~~~l~~~i~~~L~~agi~~ 66 (330)
T 2ivn_A 2 LALGIEGTAHTLGIGIVSE-DKVLANVFDTLT--TEKGGI------HPKE--AAE----HHARLMKPLLRKALSEAGVSL 66 (330)
T ss_dssp CEEEEECSSSEEEEEEECS-SCEEEEEEEECC--CTTCCC------CHHH--HHH----HHHHHHHHHHHHHHHHHTCCT
T ss_pred EEEEEEccCCCeEEEEEEC-CEEEEEEEEEee--cccCCc------Cchh--hHH----HHHHHHHHHHHHHHHHcCCCH
Confidence 5899999999999999984 588876655543 122121 1220 001 1122233344443332 567
Q ss_pred CCeeEEEEec
Q 008692 89 SKVTAVSGSG 98 (557)
Q Consensus 89 ~~I~aIgis~ 98 (557)
++|.+|+++.
T Consensus 67 ~did~Ia~~~ 76 (330)
T 2ivn_A 67 DDIDVIAFSQ 76 (330)
T ss_dssp TTCCEEEEEE
T ss_pred HHCcEEEEEC
Confidence 8899998864
No 85
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=84.60 E-value=0.74 Score=45.47 Aligned_cols=44 Identities=18% Similarity=0.183 Sum_probs=32.8
Q ss_pred CCEEEEecCCcchhhHHHHHHHHhCCceEEecCCCchhHHHHHHH
Q 008692 447 PRRIIATGGASANQTILSCLASIYGCDIYTVQRPDSASLGAALRA 491 (557)
Q Consensus 447 ~~~i~~~GGga~s~~w~Qi~Advlg~pv~~~~~~e~~alGAA~lA 491 (557)
...|.++|...-.+...+.++ .+|.++...+..+++.-|-..++
T Consensus 247 ~~~v~LiG~~~L~~~Y~~AL~-~~G~~~~~~d~~~~~~~GL~~~~ 290 (295)
T 3nuw_A 247 QQAISLVAGSSLTSRYQQAFA-AIGREVSAVAGDTAFQTGIRSIA 290 (295)
T ss_dssp SSCEEEEECHHHHHHHHHHHH-HTTCCEEEEEHHHHHHHHHHHHH
T ss_pred CCeEEEEeCHHHHHHHHHHHH-HcCCCceecCHHHHHHHHHHHHH
Confidence 367999999998888888886 48999888765555555644433
No 86
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=84.19 E-value=0.91 Score=44.77 Aligned_cols=26 Identities=12% Similarity=0.106 Sum_probs=21.5
Q ss_pred cEEEEEEccCCceEEEEEcCCCCEEEE
Q 008692 10 SLFLGFDSSTQSLKATVLDSNLNIVAS 36 (557)
Q Consensus 10 ~~~lgIDiGTts~Ka~l~d~~G~~v~~ 36 (557)
.+.+|||+|+|.+|++++ ++|+++..
T Consensus 20 ~~~iGIDiGsTt~K~V~~-~~~~i~~~ 45 (287)
T 2ews_A 20 HMKVGIDAGGTLIKIVQE-QDNQRTFK 45 (287)
T ss_dssp -CEEEEEECSSEEEEEEE-CSSCEEEE
T ss_pred CeEEEEEEChhhEEEEEE-cCCEEEEE
Confidence 478999999999999999 46777754
No 87
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=84.16 E-value=0.87 Score=45.64 Aligned_cols=68 Identities=13% Similarity=0.061 Sum_probs=41.4
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEecCCcchhhHHHHHHHHhCCceE-----E-ec-CCCchhHHHHHH
Q 008692 418 DPPSEVRALVEGQFLSMRGHAERFGLPSPPRRIIATGGASANQTILSCLASIYGCDIY-----T-VQ-RPDSASLGAALR 490 (557)
Q Consensus 418 ~~~~l~rAvlEgia~~~r~~~~~l~~~~~~~~i~~~GGga~s~~w~Qi~Advlg~pv~-----~-~~-~~e~~alGAA~l 490 (557)
+..++++.+.|-..-.+...++.+-+...+++|+++||| +.+..-+|+- +|+. + ++ ..-+.|+|+|++
T Consensus 247 ~~~~lA~~~~~~q~~~I~~av~~v~~~~~~~~vv~aG~G---~~L~~~la~~--~~~~~~~~~i~~~~s~vapA~avA~l 321 (334)
T 3cet_A 247 DAENIAKNYYELWKELILENVENVAEKYGSKKVVITGLG---ENILKDALAD--FEVISVAERYGKDVSLATPSFAVAEL 321 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEESTT---HHHHHHHTTT--SEEEEHHHHHCHHHHHSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeCCc---HHHHHHHHhh--CCeeehhcccCcccccccCHHHHHHH
Confidence 466677777777666666666543221134489999988 3666666655 7776 3 22 123557777776
No 88
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=82.57 E-value=3 Score=41.79 Aligned_cols=72 Identities=13% Similarity=0.165 Sum_probs=51.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHcCCC-CCCCEEEEecCCcchhhHHHHHHHHhCCceEEecCCC-chhHHHHHHHHh
Q 008692 420 PSEVRALVEGQFLSMRGHAERFGLP-SPPRRIIATGGASANQTILSCLASIYGCDIYTVQRPD-SASLGAALRAAH 493 (557)
Q Consensus 420 ~~l~rAvlEgia~~~r~~~~~l~~~-~~~~~i~~~GGga~s~~w~Qi~Advlg~pv~~~~~~e-~~alGAA~lA~~ 493 (557)
.+.++..++-.+-.+...+...+.. ..++.|+++||||.- +.+.+.+.++.++.+++.++ +.|+|+..++..
T Consensus 251 ~~~i~~~~~e~~~~I~~~i~~~~~~~~~~~~IvltGGGA~l--~~~~l~~~~~~~v~v~~~P~~a~a~G~~~~~~~ 324 (329)
T 4apw_A 251 STVIKKVKEKFLKDAIKLIEKRGFKLDQLDSLIFIGGTTQK--LKEQISKTYPNNSIITNNSQWTTCEGLYKVAVA 324 (329)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHTCCTTSCSEEEEESTTHHH--HHHHHHHHSTTCEECCSSGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHccEEEEECChHHH--HHHHHHHHcCCCCEecCCChhhHHHHHHHHHhh
Confidence 5566666666666665555544322 236799999999974 56899999998999887554 888998887654
No 89
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=81.66 E-value=1.7 Score=44.97 Aligned_cols=47 Identities=6% Similarity=0.040 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHHHHcCC--CCCCCEEEEecCCc-chhhHHHHHHHH
Q 008692 423 VRALVEGQFLSMRGHAERFGL--PSPPRRIIATGGAS-ANQTILSCLASI 469 (557)
Q Consensus 423 ~rAvlEgia~~~r~~~~~l~~--~~~~~~i~~~GGga-~s~~w~Qi~Adv 469 (557)
++-++|..+|.++..+-.+.. +.+++.|++|||.. +++.+++.+.+-
T Consensus 314 A~lA~d~f~yri~k~IGa~aa~L~G~vDaIVFTgGIGEns~~vR~~v~~~ 363 (415)
T 3sk3_A 314 AKRAMDVYCHRLAKYIGSYTALMDGRLDAVVFTGGIGENAAMVRELSLGK 363 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGGSTTCCCEEEEEHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEECCccccCCHHHHHHHHhh
Confidence 566889999999998887653 55789999999998 666666655543
No 90
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=79.97 E-value=2.9 Score=44.96 Aligned_cols=61 Identities=20% Similarity=0.233 Sum_probs=45.2
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEecCCcchhhHHHHHHHHh---CCceEEec
Q 008692 418 DPPSEVRALVEGQFLSMRGHAERFGLPSPPRRIIATGGASANQTILSCLASIY---GCDIYTVQ 478 (557)
Q Consensus 418 ~~~~l~rAvlEgia~~~r~~~~~l~~~~~~~~i~~~GGga~s~~w~Qi~Advl---g~pv~~~~ 478 (557)
+++++.+++.+.++-.+....+...+...+++|.++||.+.|..+++.+...+ |.+|..++
T Consensus 220 ~~~~ia~~fq~~~~~~l~~~~~~a~~~~~~~~~~~~GGVa~N~~l~~~l~~~~~~~~~~~~~p~ 283 (540)
T 3en9_A 220 RLEDICYSLQEYAFSMLTEITERALAHTNKGEVMLVGGVAANNRLREMLKAMCEGQNVDFYVPP 283 (540)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSEEEEESGGGGCHHHHHHHHHHHHHTTCEEECCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeCcHHhHHHHHHHHHHHHHhcCCEEEeCC
Confidence 46778888777777666666554322124589999999999999999998876 66777754
No 91
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=79.91 E-value=3.6 Score=44.22 Aligned_cols=77 Identities=9% Similarity=0.223 Sum_probs=48.9
Q ss_pred CCcEEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhcCC
Q 008692 8 KDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLD 87 (557)
Q Consensus 8 ~~~~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~~~ 87 (557)
++.++||||..+..+.++|++.++++++....... +.. |++-.... ++++.+.+...+.+++++ ..
T Consensus 4 ~~m~iL~i~ts~~~~~~al~~~~~~~~~~~~~~~~---~~~---gg~~p~~a----~~~h~~~l~~~i~~~l~~----~~ 69 (540)
T 3en9_A 4 DPMICLGLEGTAEKTGVGIVTSDGEVLFNKTIMYK---PPK---QGINPREA----ADHHAETFPKLIKEAFEV----VD 69 (540)
T ss_dssp CSCEEEEEECSSSEEEEEEEETTSCEEEEEEEECC---CCC---SSSSCCCH----HHHHHHHHHHHHHHHHHH----SC
T ss_pred ccceEEEEEcCccceEEEEEECCCeEEEEEEEeec---CCC---CCCChHHH----HHHHHHHHHHHHHHHHHh----CC
Confidence 34579999999999999999988899988766543 122 22322221 233344455555555554 34
Q ss_pred CCCeeEEEEec
Q 008692 88 LSKVTAVSGSG 98 (557)
Q Consensus 88 ~~~I~aIgis~ 98 (557)
..+|.+|++|.
T Consensus 70 ~~~id~ia~~~ 80 (540)
T 3en9_A 70 KNEIDLIAFSQ 80 (540)
T ss_dssp GGGCCEEEEEE
T ss_pred HhHCcEEEEec
Confidence 56788888875
No 92
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=78.78 E-value=3.1 Score=43.44 Aligned_cols=46 Identities=24% Similarity=0.240 Sum_probs=33.0
Q ss_pred EEEEecCCc-chhhHHHHHHHHh----C-CceEEecCCCchhHHHHHHHHhc
Q 008692 449 RIIATGGAS-ANQTILSCLASIY----G-CDIYTVQRPDSASLGAALRAAHG 494 (557)
Q Consensus 449 ~i~~~GGga-~s~~w~Qi~Advl----g-~pv~~~~~~e~~alGAA~lA~~a 494 (557)
.|-+.|+.- +.|.+.+++...+ + .+|......+++.+|||++|+++
T Consensus 386 ~VgvDGsvy~~~P~f~~~l~~~l~~l~~~~~v~~~~s~DGSg~GAAl~AA~a 437 (445)
T 3hm8_A 386 SVGVDGTLYKLHPRFSSLVAATVRELAPRCVVTFLQSEDGSGKGAALVTAVA 437 (445)
T ss_dssp EEEEECHHHHHCTTHHHHHHHHHHHHCTTEEEEEEECSSCHHHHHHHHHHHH
T ss_pred EEEEeceehccChhHHHHHHHHHHHhCCCCcEEEEECCCCchHHHHHHHHHH
Confidence 455566554 5566665555443 3 47888778899999999999998
No 93
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=77.95 E-value=5.2 Score=39.05 Aligned_cols=68 Identities=13% Similarity=0.053 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCEEEEecCCcchhhHHHHHHHHh-CCceEEecCCCchhHHHHHHHHhc
Q 008692 423 VRALVEGQFLSMRGHAERFGLPSPPRRIIATGGASANQTILSCLASIY-GCDIYTVQRPDSASLGAALRAAHG 494 (557)
Q Consensus 423 ~rAvlEgia~~~r~~~~~l~~~~~~~~i~~~GGga~s~~w~Qi~Advl-g~pv~~~~~~e~~alGAA~lA~~a 494 (557)
++-..+.++..+..++..+ .++.|++.||.++++.+.+.+...+ ..+|......+++++|||.++...
T Consensus 220 l~~~~~~La~~i~~l~~~l----~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~GAa~la~~~ 288 (299)
T 2e2o_A 220 LKQGAELLASQAVYLARKI----GTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDLGKRSPEIGAVILAYKE 288 (299)
T ss_dssp HHHHHHHHHHHHHHHHHHH----TCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEECCSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhc----CCCEEEEECCccCcHHHHHHHHHHCCCCeEeccCCCCChHHHHHHHHHHh
Confidence 3333344444444444444 4578999999887666655554444 347887764457889999998754
No 94
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=77.39 E-value=3.3 Score=41.60 Aligned_cols=79 Identities=14% Similarity=0.237 Sum_probs=45.5
Q ss_pred CCCcEEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhcC
Q 008692 7 PKDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSL 86 (557)
Q Consensus 7 ~~~~~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~~ 86 (557)
|+..++||||..+..+-++|++ +|++++.....+.. .. +++.+... .+++.+.+...+..++++.- .
T Consensus 3 ~~~M~iLgIdts~~~~svAl~~-~~~i~~~~~~~~~~---~~---gGv~p~~a----~~~H~~~l~~~i~~~L~~ag--~ 69 (334)
T 3eno_A 3 MDPMIVLGLEGTAHTISCGIID-ESRILAMESSMYRP---KT---GGIRPLDA----AVHHSEVIDTVISRALEKAK--I 69 (334)
T ss_dssp CCCCEEEEEECSSSEEEEEEEE-SSCCCEEEEEECCC---SS---CSCCHHHH----HHHHHHHHHHHHHHHHHHHT--C
T ss_pred ccCceEEEEECCCcCeEEEEEE-CCEEEEEEEEeecc---cc---CCcCcchH----HHHHHHHHHHHHHHHHHHcC--C
Confidence 4456899999999999999998 56888765544321 11 12221110 01222233333344433321 5
Q ss_pred CCCCeeEEEEec
Q 008692 87 DLSKVTAVSGSG 98 (557)
Q Consensus 87 ~~~~I~aIgis~ 98 (557)
...+|.+|+++.
T Consensus 70 ~~~did~Iav~~ 81 (334)
T 3eno_A 70 SIHDIDLIGFSM 81 (334)
T ss_dssp CGGGCCEEEEEC
T ss_pred CHHHCCEEEEEc
Confidence 678899999875
No 95
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=75.67 E-value=9.3 Score=39.12 Aligned_cols=46 Identities=9% Similarity=-0.015 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHHHHHcCC--CCCCCEEEEecCCc-chhhHHHHHHH
Q 008692 422 EVRALVEGQFLSMRGHAERFGL--PSPPRRIIATGGAS-ANQTILSCLAS 468 (557)
Q Consensus 422 l~rAvlEgia~~~r~~~~~l~~--~~~~~~i~~~GGga-~s~~w~Qi~Ad 468 (557)
-++-++|..+|.++..+-.+.. | .++.|+++||.+ +++.+++.+.+
T Consensus 298 ~A~la~d~f~yriak~Iga~aa~LG-~vDaIVfTGGIgEns~~vr~~I~~ 346 (398)
T 4ijn_A 298 HAKLAYDVYIHRLRKYIGAYMAVLG-RTDVISFTAGVGENVPPVRRDALA 346 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHS-SCCEEEEEHHHHHHCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEECCccccccHHHHHHHHH
Confidence 3566788888888777665432 3 689999999998 55656655443
No 96
>3r9p_A ACKA; ssgcid, seattle structural genomics center for infectious DI acetate kinase, transferase; HET: PGE; 1.90A {Mycobacterium avium subsp} PDB: 3p4i_A 4dq8_A
Probab=74.67 E-value=9.3 Score=39.01 Aligned_cols=46 Identities=11% Similarity=-0.034 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHHHHHcCC--CCCCCEEEEecCCcc-hhhHHHHHHH
Q 008692 422 EVRALVEGQFLSMRGHAERFGL--PSPPRRIIATGGASA-NQTILSCLAS 468 (557)
Q Consensus 422 l~rAvlEgia~~~r~~~~~l~~--~~~~~~i~~~GGga~-s~~w~Qi~Ad 468 (557)
-++-++|..+|.++..+-.+.. | .++.|+++||... |+..++.+.+
T Consensus 289 ~A~lA~d~f~yri~k~Iga~aa~Lg-~vDaIVfTGGIgens~~vR~~i~~ 337 (391)
T 3r9p_A 289 AAQLAYSVFTHRLRKYIGAYLAVLG-HTDVISFTAGIGENDAAVRRDAVS 337 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHS-SCCEEEEEHHHHHHCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-CCCEEEECcccccCCHHHHHHHHH
Confidence 3566788888888877765432 4 6899999999986 5666665443
No 97
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=72.79 E-value=3.8 Score=43.11 Aligned_cols=46 Identities=17% Similarity=0.275 Sum_probs=34.6
Q ss_pred EEEEecCCc-chhhHHHHHHHHh-----CCceEEecCCCchhHHHHHHHHhc
Q 008692 449 RIIATGGAS-ANQTILSCLASIY-----GCDIYTVQRPDSASLGAALRAAHG 494 (557)
Q Consensus 449 ~i~~~GGga-~s~~w~Qi~Advl-----g~pv~~~~~~e~~alGAA~lA~~a 494 (557)
.|-+.|+.- +.|.+.+.+...+ +.+|......+++.+|||++|+++
T Consensus 410 ~VgvDGsv~~~yp~f~~~~~~~l~~l~~~~~v~l~~a~DGSg~GAAliAa~a 461 (470)
T 3f9m_A 410 TVGVDGSVYKLHPSFKERFHASVRRLTPSCEITFIESEEGSGRGAALVSAVA 461 (470)
T ss_dssp EEEEECHHHHHCTTHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHHHH
T ss_pred EEEEeccHHHhCchHHHHHHHHHHHHcCCCeEEEEEcCCCcHHHHHHHHHHH
Confidence 466666665 5677766665553 467888888899999999999998
No 98
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=72.67 E-value=1.8 Score=44.08 Aligned_cols=22 Identities=23% Similarity=0.243 Sum_probs=18.8
Q ss_pred cEEEEEEccCCceEEEEEcCCCC
Q 008692 10 SLFLGFDSSTQSLKATVLDSNLN 32 (557)
Q Consensus 10 ~~~lgIDiGTts~Ka~l~d~~G~ 32 (557)
+.++|||+|||++++++++ +|+
T Consensus 18 ~~viGID~GTt~s~va~~~-~g~ 39 (394)
T 3qfu_A 18 GTVIGIDLGTTYSCVAVMK-NGK 39 (394)
T ss_dssp CSCEEEEECSSEEEEEEEC-SSC
T ss_pred CCEEEEEeCcCcEEEEEEE-CCe
Confidence 4689999999999999986 454
No 99
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=72.09 E-value=1.9 Score=43.46 Aligned_cols=66 Identities=15% Similarity=0.058 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHHH-cCC-CCCCCEEEEecCCcchhhHHHHHHHHhCCceEE---ecC-CCchhHHHHHHHH
Q 008692 424 RALVEGQFLSMRGHAER-FGL-PSPPRRIIATGGASANQTILSCLASIYGCDIYT---VQR-PDSASLGAALRAA 492 (557)
Q Consensus 424 rAvlEgia~~~r~~~~~-l~~-~~~~~~i~~~GGga~s~~w~Qi~Advlg~pv~~---~~~-~e~~alGAA~lA~ 492 (557)
+.+++-++-.+...++. ++. ...++.|+++||+|+- +.+.+.+.|+.. .+ ... .++.|+|+..++.
T Consensus 272 ~~~i~~~~~~i~~~i~~~l~~~~~~i~~IvL~GGga~l--l~~~l~~~~~~~-~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 272 GPILEDLANRIIENIRLNLRGEVDRVTSLIPVGGGSNL--IGDRFEEIAPGT-LVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGGGGEEEEEEESTTHHH--HGGGGGGGSTTC-BCCCCTTTTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcccEEEEECCcHHH--HHHHHHHHCcCc-EEeccCCCcHHHHHHHHHHHHh
Confidence 44444444444433332 332 1245899999999986 778889999843 33 444 4788999987653
No 100
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=70.68 E-value=14 Score=36.05 Aligned_cols=70 Identities=19% Similarity=0.226 Sum_probs=42.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEecCCcchhhHHHHHHHHhC------CceEEec-CCCchhHHHHHHHHh
Q 008692 421 SEVRALVEGQFLSMRGHAERFGLPSPPRRIIATGGASANQTILSCLASIYG------CDIYTVQ-RPDSASLGAALRAAH 493 (557)
Q Consensus 421 ~l~rAvlEgia~~~r~~~~~l~~~~~~~~i~~~GGga~s~~w~Qi~Advlg------~pv~~~~-~~e~~alGAA~lA~~ 493 (557)
++++-..+.++..+..++..+ .++.|++.||.++.+.+.+.+-..+. .+|.... ..+++++|||.++..
T Consensus 216 ~~~~~~~~~La~~i~~l~~~~----~p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~ 291 (297)
T 4htl_A 216 RLITEFYTGICTGLYNLIYLF----DPTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQ 291 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH----CCSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHh----CCCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHH
Confidence 334444444555555555444 35789999998876656554444432 2455554 345788999998865
Q ss_pred c
Q 008692 494 G 494 (557)
Q Consensus 494 a 494 (557)
.
T Consensus 292 ~ 292 (297)
T 4htl_A 292 E 292 (297)
T ss_dssp H
T ss_pred H
Confidence 4
No 101
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=69.58 E-value=4.6 Score=39.29 Aligned_cols=63 Identities=19% Similarity=0.087 Sum_probs=45.4
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHcCC--CCCCCEEEEecCCcchhhHHHHHHHHhCCceEEecCCCchhHHHHHH
Q 008692 418 DPPSEVRALVEGQFLSMRGHAERFGL--PSPPRRIIATGGASANQTILSCLASIYGCDIYTVQRPDSASLGAALR 490 (557)
Q Consensus 418 ~~~~l~rAvlEgia~~~r~~~~~l~~--~~~~~~i~~~GGga~s~~w~Qi~Advlg~pv~~~~~~e~~alGAA~l 490 (557)
|.+.|-..++-|.+..+..+++++++ + +.-+|+++||.++. +++.+. +..+ .++-+..|-.++
T Consensus 203 T~~ai~sGi~~g~~g~Ie~~i~~~~~e~~-~~~~vi~TGG~a~~------l~~~~~-~~~~--d~~LvL~GL~~i 267 (271)
T 2f9w_A 203 TAEAVERGCLLMLRGFVREQYAMACELLG-PDCEIFLTGGDAEL------VRDELA-GARI--MPDLVFVGLALA 267 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEESTTGGG------TGGGCT-TCEE--CTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEECCCHHH------HHhhCC-CCEE--CcChHHHHHHHH
Confidence 78889999999999999988888764 3 34589999998753 556665 4443 345666676554
No 102
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=69.20 E-value=2.2 Score=43.93 Aligned_cols=22 Identities=5% Similarity=0.060 Sum_probs=18.7
Q ss_pred cEEEEEEccCCceEEEEEcCCCC
Q 008692 10 SLFLGFDSSTQSLKATVLDSNLN 32 (557)
Q Consensus 10 ~~~lgIDiGTts~Ka~l~d~~G~ 32 (557)
++++|||+|||+++++++ .+|+
T Consensus 13 ~~vvGIDlGTt~s~va~~-~~g~ 34 (409)
T 4gni_A 13 RVVIGITFGNSNSSIAHT-VDDK 34 (409)
T ss_dssp CCEEEEEECSSEEEEEEE-ETTE
T ss_pred CcEEEEEcCCCeEEEEEE-eCCc
Confidence 479999999999999998 4554
No 103
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=68.16 E-value=1.2 Score=42.25 Aligned_cols=23 Identities=30% Similarity=0.329 Sum_probs=11.0
Q ss_pred EEEEEccCCce--------EEEEEcCCCCEE
Q 008692 12 FLGFDSSTQSL--------KATVLDSNLNIV 34 (557)
Q Consensus 12 ~lgIDiGTts~--------Ka~l~d~~G~~v 34 (557)
-=|+|+||.++ ||+|||.||.++
T Consensus 8 ~~~~~~~~~~~~~~~~~MIKaViFDlDGTLv 38 (250)
T 4gib_A 8 SSGVDLGTENLYFQSNAMIEAFIFDLDGVIT 38 (250)
T ss_dssp ----------------CCCCEEEECTBTTTB
T ss_pred cccccCCCCCcccCccchhheeeecCCCccc
Confidence 35899999998 899999999875
No 104
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=66.76 E-value=14 Score=36.56 Aligned_cols=74 Identities=15% Similarity=0.043 Sum_probs=42.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCCCCCCC--------EEEEecCCcch-hhHHHH----HHHHh-------CCceEEecCC
Q 008692 421 SEVRALVEGQFLSMRGHAERFGLPSPPR--------RIIATGGASAN-QTILSC----LASIY-------GCDIYTVQRP 480 (557)
Q Consensus 421 ~l~rAvlEgia~~~r~~~~~l~~~~~~~--------~i~~~GGga~s-~~w~Qi----~Advl-------g~pv~~~~~~ 480 (557)
..++.+++-.+..+...+..+..-..++ .|++.||.++. +.+.+. +.... ..+|+.....
T Consensus 232 ~~a~~il~~~~~~La~~i~~l~~~~~p~~~~~~~~~~IvlgGgv~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~ 311 (347)
T 2ch5_A 232 PLSRYIFRKAGEMLGRHIVAVLPEIDPVLFQGKIGLPILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFSSFTLMKLR 311 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGSCGGGGCSTTCEEEEEESGGGGGHHHHHHHHHHHHHHHC---CCCSCSEEEEEEES
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCceEEEECCcccCcHHHHHHHHHHHHhhccccccccCCceEEEecC
Confidence 3455556655555555555433212344 78888888754 444332 22221 2456665555
Q ss_pred CchhHHHHHHHHhc
Q 008692 481 DSASLGAALRAAHG 494 (557)
Q Consensus 481 e~~alGAA~lA~~a 494 (557)
+++++|||.++...
T Consensus 312 ~a~~~GAa~la~~~ 325 (347)
T 2ch5_A 312 HSSALGGASLGARH 325 (347)
T ss_dssp SCTHHHHHHHHHHT
T ss_pred CChHHHHHHHHHHh
Confidence 58889999998765
No 105
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=65.89 E-value=17 Score=35.89 Aligned_cols=68 Identities=18% Similarity=0.033 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEecCCcch-hhHHHHHHHHh----------CCceEEecC-CCchhHHHHH
Q 008692 422 EVRALVEGQFLSMRGHAERFGLPSPPRRIIATGGASAN-QTILSCLASIY----------GCDIYTVQR-PDSASLGAAL 489 (557)
Q Consensus 422 l~rAvlEgia~~~r~~~~~l~~~~~~~~i~~~GGga~s-~~w~Qi~Advl----------g~pv~~~~~-~e~~alGAA~ 489 (557)
+++-..+-++..+..++..+ .++.|++.||.++. +.+.+.+-+.+ ..+|..... .+++++|||.
T Consensus 240 ~~~~~~~~La~~i~~l~~~l----dP~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~ 315 (321)
T 3r8e_A 240 VWADIGTIIGESLVNIVRVM----DLNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAG 315 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHH----CCCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH----CCCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHH
Confidence 33444444444444444444 35789999998875 55544333222 234555543 3578899999
Q ss_pred HHHh
Q 008692 490 RAAH 493 (557)
Q Consensus 490 lA~~ 493 (557)
++..
T Consensus 316 l~~~ 319 (321)
T 3r8e_A 316 LIME 319 (321)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 8854
No 106
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=65.84 E-value=15 Score=37.29 Aligned_cols=46 Identities=13% Similarity=0.113 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHHHHcCC--CCCCCEEEEecCCc-chhhHHHHHHHH
Q 008692 423 VRALVEGQFLSMRGHAERFGL--PSPPRRIIATGGAS-ANQTILSCLASI 469 (557)
Q Consensus 423 ~rAvlEgia~~~r~~~~~l~~--~~~~~~i~~~GGga-~s~~w~Qi~Adv 469 (557)
++-++|..+|.++..+-.+.. + .++.|++|||.. .|+..++.+.+-
T Consensus 289 A~lA~d~f~yri~k~IGa~aa~L~-gvDaIVFTgGIgEns~~iR~~i~~~ 337 (384)
T 3khy_A 289 AKLAIEIFSHRVAKFVASYMIYFN-KLDALVFTGGIGENAANIRKNIISK 337 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGCS-SCCEEEEEHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-CCCEEEECCccccCcHHHHHHHHhh
Confidence 466889999999888876542 5 689999999988 667677655443
No 107
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=65.48 E-value=4.3 Score=41.25 Aligned_cols=47 Identities=17% Similarity=0.195 Sum_probs=36.5
Q ss_pred CEEEEecCCcchhhHHHHHHHHhC--------CceEEec-CCCchhHHHHHHHHhc
Q 008692 448 RRIIATGGASANQTILSCLASIYG--------CDIYTVQ-RPDSASLGAALRAAHG 494 (557)
Q Consensus 448 ~~i~~~GGga~s~~w~Qi~Advlg--------~pv~~~~-~~e~~alGAA~lA~~a 494 (557)
++|+++||+|+-+-+.+.+.+-++ .+|..+. ...++.+|++++|...
T Consensus 295 ~~IvLtGG~s~~pG~~~rl~~el~~~~p~~~~v~v~~~~~p~~~~w~G~si~a~l~ 350 (375)
T 2fxu_A 295 ANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 350 (375)
T ss_dssp TCEEEESGGGCSTTHHHHHHHHHHHHSCTTCCCCEECCTTTTSHHHHHHHHHHHCG
T ss_pred hCcEeeCCCCCCccHHHHHHHHHHHhCCCCeeEEEEcCCCCCccEEcchHHhhCcc
Confidence 569999999999999998888776 3333333 3468899999999754
No 108
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=65.25 E-value=19 Score=34.81 Aligned_cols=70 Identities=13% Similarity=0.090 Sum_probs=41.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEecCCcchhhHHHHHHHHh------------CCceEEec-CCCchhHHH
Q 008692 421 SEVRALVEGQFLSMRGHAERFGLPSPPRRIIATGGASANQTILSCLASIY------------GCDIYTVQ-RPDSASLGA 487 (557)
Q Consensus 421 ~l~rAvlEgia~~~r~~~~~l~~~~~~~~i~~~GGga~s~~w~Qi~Advl------------g~pv~~~~-~~e~~alGA 487 (557)
.+++-..+.++..+..++..+ .++.|++.||.+..+.+.+.+-..+ ..+|.... ..+++++||
T Consensus 206 ~i~~~~~~~L~~~i~~l~~~l----~p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GA 281 (292)
T 2gup_A 206 EAIERMNRNLAQGLLNIQYLI----DPGVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGA 281 (292)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH----CCSEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHh----CCCEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHH
Confidence 344455555555555555555 3578888888876655543332221 24566554 345788999
Q ss_pred HHHHHhc
Q 008692 488 ALRAAHG 494 (557)
Q Consensus 488 A~lA~~a 494 (557)
|.++..-
T Consensus 282 a~~~~~~ 288 (292)
T 2gup_A 282 LVNWLQE 288 (292)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9987643
No 109
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=65.13 E-value=3.4 Score=44.58 Aligned_cols=25 Identities=16% Similarity=0.069 Sum_probs=19.8
Q ss_pred CCCcEEEEEEccCCceEEEEEcCCCC
Q 008692 7 PKDSLFLGFDSSTQSLKATVLDSNLN 32 (557)
Q Consensus 7 ~~~~~~lgIDiGTts~Ka~l~d~~G~ 32 (557)
|.+..++|||+|||++.+++++ +|+
T Consensus 1 M~m~~~iGIDlGTt~s~va~~~-~g~ 25 (554)
T 1yuw_A 1 MSKGPAVGIDLGTTYSCVGVFQ-HGK 25 (554)
T ss_dssp CCSCCCEEEEECSSEEEEEEEC-SSS
T ss_pred CCCCCEEEEEeCcccEEEEEEE-CCE
Confidence 3445689999999999999986 354
No 110
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=64.26 E-value=14 Score=35.52 Aligned_cols=68 Identities=16% Similarity=0.181 Sum_probs=40.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEecCCcchhhHHHHHHHHhC-------CceEEec-CCCchhHHHHHHHH
Q 008692 421 SEVRALVEGQFLSMRGHAERFGLPSPPRRIIATGGASANQTILSCLASIYG-------CDIYTVQ-RPDSASLGAALRAA 492 (557)
Q Consensus 421 ~l~rAvlEgia~~~r~~~~~l~~~~~~~~i~~~GGga~s~~w~Qi~Advlg-------~pv~~~~-~~e~~alGAA~lA~ 492 (557)
.+++-..+.++..+..++..+ .++.|++.||.+.++.+.+.+...+. .+|.... ..+++++|||.++.
T Consensus 212 ~i~~~~~~~L~~~i~~l~~~l----~p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~ 287 (289)
T 2aa4_A 212 QLIHRSARTLARLIADIKATT----DCQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLAQ 287 (289)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH----CCSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhc----CCCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHHh
Confidence 334444445555555555554 35778888888755655554444332 3455544 34578899999874
No 111
>3bzc_A TEX; helix-turn-helix, helix-hairpin-helix, S1 domain, YQGF domain, transcription, RNA binding protein; 2.27A {Pseudomonas aeruginosa} SCOP: a.60.2.6 a.60.2.6 a.294.1.1 b.40.4.5 c.55.3.13 PDB: 3bzk_A 2oce_A
Probab=63.73 E-value=16 Score=40.92 Aligned_cols=31 Identities=19% Similarity=0.380 Sum_probs=27.3
Q ss_pred CcEEEEEEcc-CCceEEEEEcCCCCEEEEEee
Q 008692 9 DSLFLGFDSS-TQSLKATVLDSNLNIVASEQL 39 (557)
Q Consensus 9 ~~~~lgIDiG-Tts~Ka~l~d~~G~~v~~~~~ 39 (557)
.+.+||||-| .|++|++++|.+|+++.....
T Consensus 328 ~~~vlg~dpg~r~g~k~a~vd~~G~~l~~~~i 359 (785)
T 3bzc_A 328 PRATLGLDPGLRTGVKVAVVDATGKLLDTATV 359 (785)
T ss_dssp SCCEEEEECCSSSCEEEEEECTTSCEEEEEEE
T ss_pred CCeEEEECCCCcCceEEEEECCCCCEEEEEEE
Confidence 3579999999 699999999999999987764
No 112
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=63.67 E-value=2.5 Score=43.01 Aligned_cols=21 Identities=19% Similarity=0.346 Sum_probs=17.8
Q ss_pred EEEEEEccCCceEEEEEcCCCC
Q 008692 11 LFLGFDSSTQSLKATVLDSNLN 32 (557)
Q Consensus 11 ~~lgIDiGTts~Ka~l~d~~G~ 32 (557)
.++|||+|||++++++++ +|+
T Consensus 3 ~~vGIDlGTt~s~va~~~-~g~ 23 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMD-GTT 23 (383)
T ss_dssp CCCEEECCSSEEEEEEEE-TTE
T ss_pred cEEEEEcCCCCEEEEEEE-CCe
Confidence 478999999999999986 453
No 113
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=63.01 E-value=3.1 Score=42.60 Aligned_cols=22 Identities=18% Similarity=0.093 Sum_probs=18.5
Q ss_pred cEEEEEEccCCceEEEEEcCCCC
Q 008692 10 SLFLGFDSSTQSLKATVLDSNLN 32 (557)
Q Consensus 10 ~~~lgIDiGTts~Ka~l~d~~G~ 32 (557)
..++|||+|||++++++++ +|+
T Consensus 23 ~~viGID~GTt~s~va~~~-~g~ 44 (404)
T 3i33_A 23 MPAIGIDLGTTYSCVGVFQ-HGK 44 (404)
T ss_dssp CCCEEEEECSSEEEEEEEE-TTE
T ss_pred CCEEEEEcCCccEEEEEEE-CCe
Confidence 4689999999999999887 443
No 114
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=62.90 E-value=12 Score=36.98 Aligned_cols=68 Identities=16% Similarity=0.122 Sum_probs=40.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEecCCcchhhHHHHHHHHh---------CCceEEecC-CCchhHHHHHH
Q 008692 421 SEVRALVEGQFLSMRGHAERFGLPSPPRRIIATGGASANQTILSCLASIY---------GCDIYTVQR-PDSASLGAALR 490 (557)
Q Consensus 421 ~l~rAvlEgia~~~r~~~~~l~~~~~~~~i~~~GGga~s~~w~Qi~Advl---------g~pv~~~~~-~e~~alGAA~l 490 (557)
.+++-..+-++..+..++..+ .++.|++.||.++.+.+.+.+.+.+ ..+|..... .+++++|||.+
T Consensus 248 ~~~~~~~~~La~~i~~l~~~l----~p~~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l 323 (327)
T 4db3_A 248 EHVERFMELLAICFGNIFTAN----DPHVVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFL 323 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH----CCSEEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHh----CCCEEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHH
Confidence 344444555555555555554 3578889888887665554443333 223444442 35778999987
Q ss_pred HH
Q 008692 491 AA 492 (557)
Q Consensus 491 A~ 492 (557)
+.
T Consensus 324 ~l 325 (327)
T 4db3_A 324 NI 325 (327)
T ss_dssp TC
T ss_pred Hh
Confidence 64
No 115
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=62.26 E-value=5.1 Score=39.68 Aligned_cols=23 Identities=17% Similarity=0.200 Sum_probs=20.1
Q ss_pred EEEEEccCCceEEEEEcCCCCEE
Q 008692 12 FLGFDSSTQSLKATVLDSNLNIV 34 (557)
Q Consensus 12 ~lgIDiGTts~Ka~l~d~~G~~v 34 (557)
++|||+||+++|++..+.+|.+.
T Consensus 2 ~igiD~G~sntK~~~~~~~g~~~ 24 (320)
T 2zgy_A 2 LVFIDDGSTNIKLQWQESDGTIK 24 (320)
T ss_dssp EEEEEECSSEEEEEEECSSSCEE
T ss_pred eEEEecCCccceEEEecCCCEEE
Confidence 68999999999999878888753
No 116
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=61.27 E-value=10 Score=38.10 Aligned_cols=21 Identities=19% Similarity=0.351 Sum_probs=18.7
Q ss_pred cEEEEEEccCCceEEEEEcCC
Q 008692 10 SLFLGFDSSTQSLKATVLDSN 30 (557)
Q Consensus 10 ~~~lgIDiGTts~Ka~l~d~~ 30 (557)
+.+.+||+||.|+|..+++.+
T Consensus 16 ~~~A~IDiGSNsiRL~I~~~~ 36 (343)
T 3cer_A 16 VTVAGIDCGTNSIRLKIARVD 36 (343)
T ss_dssp EEEEEEEECSSCEEEEEEEEE
T ss_pred CeEEEEEcccceeEeEEEEEc
Confidence 468899999999999999964
No 117
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=61.12 E-value=11 Score=37.46 Aligned_cols=43 Identities=7% Similarity=-0.035 Sum_probs=28.8
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEecCCcchhhHHHHHHH
Q 008692 418 DPPSEVRALVEGQFLSMRGHAERFGLPSPPRRIIATGGASANQTILSCLAS 468 (557)
Q Consensus 418 ~~~~l~rAvlEgia~~~r~~~~~l~~~~~~~~i~~~GGga~s~~w~Qi~Ad 468 (557)
+|++++-+. +.-+..+++.+ .+++|++++++-+--++.+++..
T Consensus 268 ~Rad~i~~g----~~Il~~i~~~~----~~~~i~vs~~glreG~l~~~~~~ 310 (315)
T 3mdq_A 268 LRADMVVVA----ICLIEHVLKLV----STNAITVSTYSLKEGVLYTMLDG 310 (315)
T ss_dssp HHHHHHHHH----HHHHHHHHHHS----CCSEEEEESCCHHHHHHHHHHHT
T ss_pred hHHHHHHHH----HHHHHHHHHHc----CcCEEEECCccHHHHHHHHHhhh
Confidence 466665542 23445556665 36899999999988887776543
No 118
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=60.61 E-value=9.7 Score=40.58 Aligned_cols=24 Identities=13% Similarity=0.134 Sum_probs=18.8
Q ss_pred CCcEEEEEEccCCceEEEEEcCCC
Q 008692 8 KDSLFLGFDSSTQSLKATVLDSNL 31 (557)
Q Consensus 8 ~~~~~lgIDiGTts~Ka~l~d~~G 31 (557)
+.+.+.+||+||.|+|.++++.++
T Consensus 9 ~~~~~AaIDiGSNSirL~I~~~~~ 32 (513)
T 1u6z_A 9 RPQEFAAVDLGSNSFHMVIARVVD 32 (513)
T ss_dssp ---CEEEEEECSSCEEEEEEEEET
T ss_pred cCCeEEEEEeccccEEEEEEEEcC
Confidence 335689999999999999999653
No 119
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=59.98 E-value=32 Score=33.68 Aligned_cols=70 Identities=19% Similarity=0.233 Sum_probs=43.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEecCCcchh-----hHHHHHHHHhC-------CceEEec-CCCchhHHH
Q 008692 421 SEVRALVEGQFLSMRGHAERFGLPSPPRRIIATGGASANQ-----TILSCLASIYG-------CDIYTVQ-RPDSASLGA 487 (557)
Q Consensus 421 ~l~rAvlEgia~~~r~~~~~l~~~~~~~~i~~~GGga~s~-----~w~Qi~Advlg-------~pv~~~~-~~e~~alGA 487 (557)
..++.+++-++..+..++..+ .++.|++.||.++.. .+.+.+...+. .+|.... ..+++++||
T Consensus 218 ~~~~~~~~~~a~~la~l~~~~----dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GA 293 (310)
T 3htv_A 218 PFVQSLLENAARAIATSINLF----DPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGA 293 (310)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH----CCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhh----CCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHH
Confidence 345667777777766666655 357888888888653 23333333331 2344443 346889999
Q ss_pred HHHHHhc
Q 008692 488 ALRAAHG 494 (557)
Q Consensus 488 A~lA~~a 494 (557)
|.++...
T Consensus 294 a~la~~~ 300 (310)
T 3htv_A 294 AILAHQR 300 (310)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998755
No 120
>3psf_A Transcription elongation factor SPT6; nucleus; 2.59A {Saccharomyces cerevisiae}
Probab=59.70 E-value=17 Score=41.99 Aligned_cols=31 Identities=6% Similarity=0.157 Sum_probs=26.5
Q ss_pred CcEEEEEEccC-----CceEEEEEcCCCCEEEEEee
Q 008692 9 DSLFLGFDSST-----QSLKATVLDSNLNIVASEQL 39 (557)
Q Consensus 9 ~~~~lgIDiGT-----ts~Ka~l~d~~G~~v~~~~~ 39 (557)
.+-+||||-|- +++|++++|.+|+++.....
T Consensus 518 ~~~VlaldpG~~~~~~~g~k~a~vd~~G~~l~~~~i 553 (1030)
T 3psf_A 518 IPKILSLTCGQGRFGADAIIAVYVNRKGDFIRDYKI 553 (1030)
T ss_dssp CCCEEEEECTTCCTTTSCEEEEEECTTSCEEEEEEE
T ss_pred CCeEEEecCCCCCCCCCCeEEEEECCCCCEEEEEEE
Confidence 35799999984 48999999999999988765
No 121
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=58.71 E-value=6 Score=41.55 Aligned_cols=21 Identities=10% Similarity=-0.002 Sum_probs=18.8
Q ss_pred cEEEEEEccCCceEEEEEcCC
Q 008692 10 SLFLGFDSSTQSLKATVLDSN 30 (557)
Q Consensus 10 ~~~lgIDiGTts~Ka~l~d~~ 30 (557)
+|.+.||+||+++|..|++.+
T Consensus 34 ~y~~vID~GSns~Rl~Vy~~~ 54 (456)
T 3cj1_A 34 KYGIVLDAGSSHTSMFVYKWP 54 (456)
T ss_dssp EEEEEEEECSSCEEEEEEEEE
T ss_pred eEEEEEEcCCCCeEEEEEEEc
Confidence 588899999999999999853
No 122
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=57.71 E-value=8 Score=38.42 Aligned_cols=21 Identities=14% Similarity=0.113 Sum_probs=18.5
Q ss_pred EEEEEEccCCceEEEEEcCCC
Q 008692 11 LFLGFDSSTQSLKATVLDSNL 31 (557)
Q Consensus 11 ~~lgIDiGTts~Ka~l~d~~G 31 (557)
.+.+||+||.++|..+++.++
T Consensus 13 ~~a~IDiGSns~rl~I~~~~~ 33 (315)
T 1t6c_A 13 RVASIDIGSYSVRLTIAQIKD 33 (315)
T ss_dssp EEEEEEECSSEEEEEEEEEET
T ss_pred EEEEEEECcCcEEEEEEEEcC
Confidence 578899999999999999653
No 123
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=57.61 E-value=24 Score=35.80 Aligned_cols=86 Identities=14% Similarity=0.179 Sum_probs=50.8
Q ss_pred CCCcEEEEEEccCC--ceEEEEEcCCCC---EEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhH-------HHHH
Q 008692 7 PKDSLFLGFDSSTQ--SLKATVLDSNLN---IVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLM-------WIEA 74 (557)
Q Consensus 7 ~~~~~~lgIDiGTt--s~Ka~l~d~~G~---~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~-------~~~a 74 (557)
|+..++||+=.||| ++-+++++.+|+ +++..+.+|+...-..- ..-..+. ..++++ +-+.
T Consensus 2 ~~~~~~iGlMSGTSlDGiD~alv~~~~~~~~~~~~~~~pyp~~lr~~l---~~~~~~~-----~~~~~~~~~l~~~lg~~ 73 (370)
T 3cqy_A 2 MNKAYYIGLMSGTSMDGVDAVLVDFAGEQPQLIGTHTETIPTHLLKGL---QRLCLPG-----TDEINRLGRLDRSVGKL 73 (370)
T ss_dssp TTCCEEEEEEECTTCCCEEEEEEECSSSSCEEEEEEEECCCHHHHHHH---HGGGCTT-----SCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEecccchhhHeEEEEEEeCCeEEEEeeeeecCCHHHHHHH---HHhcCCC-----CCCHHHHHHHHHHHHHH
Confidence 55568999999998 899999998875 67777888764211000 0001111 000111 2222
Q ss_pred HHHHHHHHhhc--CCCCCeeEEEEeccc
Q 008692 75 LDLMLQKLSKS--LDLSKVTAVSGSGQQ 100 (557)
Q Consensus 75 ~~~~~~~l~~~--~~~~~I~aIgis~~~ 100 (557)
+.++++++.+. .++++|.+||.-||.
T Consensus 74 ~a~av~~~l~~~~~~~~~i~~IGsHGQT 101 (370)
T 3cqy_A 74 FALAVNNLLAKTKIAKDEIIAIGSHGQT 101 (370)
T ss_dssp HHHHHHHHHHHHCCCGGGEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCcccccEEEeCCcc
Confidence 33555555443 667899999987773
No 124
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=57.56 E-value=12 Score=36.66 Aligned_cols=50 Identities=12% Similarity=0.018 Sum_probs=30.9
Q ss_pred cCHHHHHHcCCCCCCeEEEcCChhhhhhhcc---CC--CCCCcEEEEecccceeccccCC
Q 008692 260 IAPYFVERFHFNKNCLVVQWSGDNPNSLAGL---TL--STSGDLAISLGTSDTVFGITDD 314 (557)
Q Consensus 260 l~~~~a~~~GL~~g~pV~~G~~D~~aa~~g~---g~--~~~g~~~~~~GTs~~~~~~~~~ 314 (557)
+.+.+.+++| +||.. ..|..++++|- |. -....+++++||+.....+.+.
T Consensus 100 l~~~l~~~~~----~pv~v-~ND~~aaa~~e~~~g~~~~~~~~~~l~~GtGiG~giv~~G 154 (326)
T 2qm1_A 100 VKEQIESALG----IPFAL-DNDANVAALGERWKGAGENNPDVIFITLGTGVGGGIVAAG 154 (326)
T ss_dssp HHHHHHHHHC----SCEEE-EEHHHHHHHHHHHHSTTTTCSCEEEEEESSSEEEEEEETT
T ss_pred HHHHHHHHhC----CCEEE-ecHHHHHHHHHHHhCCCCCCCcEEEEEECCceEEEEEECC
Confidence 3444555665 45554 56888888763 22 2345688999998655555553
No 125
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=57.22 E-value=22 Score=35.29 Aligned_cols=50 Identities=12% Similarity=-0.017 Sum_probs=31.0
Q ss_pred cCHHHHHHcCCCCCCeEEEcCChhhhhhhcc---CC--CCCCcEEEEecccceeccccCC
Q 008692 260 IAPYFVERFHFNKNCLVVQWSGDNPNSLAGL---TL--STSGDLAISLGTSDTVFGITDD 314 (557)
Q Consensus 260 l~~~~a~~~GL~~g~pV~~G~~D~~aa~~g~---g~--~~~g~~~~~~GTs~~~~~~~~~ 314 (557)
+.+.+.+++| +||.. ..|..|+++|- |. -....+++++||+-....+.+.
T Consensus 123 l~~~l~~~~~----~pv~v-~NDa~aaal~E~~~g~~~~~~~~v~i~~GtGiG~gii~~G 177 (343)
T 2yhw_A 123 LRTPLSDTLH----LPVWV-DNDGNCAALAERKFGQGKGLENFVTLITGTGIGGGIIHQH 177 (343)
T ss_dssp CHHHHHHHHC----SCEEE-EEHHHHHHHHHHHTSTTTTCSCEEEEEESSSEEEEEEETT
T ss_pred HHHHHHHHHC----CCEEE-echhHHHHHHHHHhCCCCCCCcEEEEEECCCEEEEEEECC
Confidence 3445556665 46554 67988888763 22 2245688999998555555553
No 126
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=57.16 E-value=4.8 Score=43.92 Aligned_cols=19 Identities=21% Similarity=0.396 Sum_probs=17.0
Q ss_pred cEEEEEEccCCceEEEEEc
Q 008692 10 SLFLGFDSSTQSLKATVLD 28 (557)
Q Consensus 10 ~~~lgIDiGTts~Ka~l~d 28 (557)
..++|||+|||++++++++
T Consensus 2 ~~viGIDlGTT~S~Va~~~ 20 (605)
T 4b9q_A 2 GKIIGIDLGTTNSCVAIMD 20 (605)
T ss_dssp CCEEEEECCSSEEEEEEEE
T ss_pred CcEEEEEcCCCcEEEEEEE
Confidence 3689999999999999985
No 127
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=56.12 E-value=30 Score=34.11 Aligned_cols=69 Identities=9% Similarity=0.054 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCE-EEEecCCcch--hh-----HHHHHHH------H-hCCceEEecCCCchhHH
Q 008692 422 EVRALVEGQFLSMRGHAERFGLPSPPRR-IIATGGASAN--QT-----ILSCLAS------I-YGCDIYTVQRPDSASLG 486 (557)
Q Consensus 422 l~rAvlEgia~~~r~~~~~l~~~~~~~~-i~~~GGga~s--~~-----w~Qi~Ad------v-lg~pv~~~~~~e~~alG 486 (557)
+++-..+-++..+..++..+ .++. |++.||.+.. ++ +.+.+.+ . -..||......+++.+|
T Consensus 244 ~~~~~~~~Lg~~i~~l~~~l----~P~~gvvigGGi~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~a~l~G 319 (332)
T 1sz2_A 244 ALSLFCVIMGRFGGNLALNL----GTFGGVFIAGGIVPRFLEFFKASGFRAAFEDKGRFKEYVHDIPVYLIVHDNPGLLG 319 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHH----TCTTEEEEECSSSGGGHHHHHHSSHHHHHHCCGGGHHHHTTCCEEEECCSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH----CCCeEEEEEChhhhhHHHHhccHHHHHHHHhcCchhhHHhCceEEEEECCchhHHH
Confidence 33333444444444444444 3455 8899988864 22 2222221 1 24567766566788999
Q ss_pred HHHHHHhc
Q 008692 487 AALRAAHG 494 (557)
Q Consensus 487 AA~lA~~a 494 (557)
||.++...
T Consensus 320 Aa~l~~~~ 327 (332)
T 1sz2_A 320 SGAHLRQT 327 (332)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99987654
No 128
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=54.74 E-value=23 Score=34.25 Aligned_cols=70 Identities=16% Similarity=0.152 Sum_probs=44.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEecCCcch--hhHHHHHHHHhCCceEEecCCCchhHHHHHHHHhc
Q 008692 421 SEVRALVEGQFLSMRGHAERFGLPSPPRRIIATGGASAN--QTILSCLASIYGCDIYTVQRPDSASLGAALRAAHG 494 (557)
Q Consensus 421 ~l~rAvlEgia~~~r~~~~~l~~~~~~~~i~~~GGga~s--~~w~Qi~Advlg~pv~~~~~~e~~alGAA~lA~~a 494 (557)
..++.+++-.+..+...+ .+..-..++.|++.||.+++ +.+.+.+... ..++..+. ++..+||+.+|...
T Consensus 210 ~~A~~i~~~~~~~La~~i-~~~~~~~p~~vvlgGGv~~~~~~~l~~~l~~~-~~~i~~~~--~a~~~GA~~la~~~ 281 (291)
T 1zbs_A 210 PAVYSLVQNSFDDFLVRN-VLRYNRPDLPLHFIGSVAFHYREVLSSVIKKR-GLTLGSVL--QSPMEGLIQYHHNN 281 (291)
T ss_dssp HHHHHHHHHHHHHHHHHH-TGGGCCTTSCEEEESHHHHHTHHHHHHHHHHT-TCCEEEEE--SCSHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHH-hcccCCCCceEEEECchHHhhHHHHHHHHHHc-CCeecccC--cCHHHHHHHHHHhh
Confidence 556777777777776666 33221256789999998877 4444433332 23454443 78899999998765
No 129
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=54.59 E-value=9.1 Score=33.62 Aligned_cols=25 Identities=24% Similarity=0.231 Sum_probs=22.2
Q ss_pred EEEEEEccCCceEEEEEcCCCCEEE
Q 008692 11 LFLGFDSSTQSLKATVLDSNLNIVA 35 (557)
Q Consensus 11 ~~lgIDiGTts~Ka~l~d~~G~~v~ 35 (557)
-+||||.|+..++.++.|..|....
T Consensus 4 riLGiDpG~~riGvAv~d~~g~~a~ 28 (150)
T 1vhx_A 4 RILGLDLGTKTLGVALSDEMGWTAQ 28 (150)
T ss_dssp EEEEEEECSSEEEEEEECTTSSSEE
T ss_pred EEEEEEccCCEEEEEEEECCCCEEe
Confidence 4899999999999999999988643
No 130
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=54.55 E-value=29 Score=34.14 Aligned_cols=69 Identities=23% Similarity=0.312 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEecCCcch-hhHHHHHHHHh-----------CCceEEec-CCCchhHHHH
Q 008692 422 EVRALVEGQFLSMRGHAERFGLPSPPRRIIATGGASAN-QTILSCLASIY-----------GCDIYTVQ-RPDSASLGAA 488 (557)
Q Consensus 422 l~rAvlEgia~~~r~~~~~l~~~~~~~~i~~~GGga~s-~~w~Qi~Advl-----------g~pv~~~~-~~e~~alGAA 488 (557)
+++-..+-++..+..++..+ .++.|++.||.++. +.+.+.+-+.+ ..+|.... ..+++++|||
T Consensus 232 ~~~~~~~~La~~i~~l~~~l----~p~~IvlgGgi~~~~~~l~~~l~~~l~~~~~~~~~~~~~~i~~s~l~~~a~l~GAa 307 (321)
T 3vgl_A 232 SFRELARWAGAGLADLASLF----DPSAFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQLGGKAGLVGAA 307 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHH----CCSEEEEESGGGGGTHHHHHHHHHHHHHHCTTGGGSCCCEEEECTTGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh----CCCEEEEeChhhcchHHHHHHHHHHHHHhcccccccCCCEEEECCCCCcHHHHHHH
Confidence 33344444444444444444 35789999988865 44333222211 12455555 3457889999
Q ss_pred HHHHhc
Q 008692 489 LRAAHG 494 (557)
Q Consensus 489 ~lA~~a 494 (557)
.++..+
T Consensus 308 ~l~~~~ 313 (321)
T 3vgl_A 308 DLARQG 313 (321)
T ss_dssp HHHHTC
T ss_pred HHHHhh
Confidence 998876
No 131
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=53.81 E-value=24 Score=36.89 Aligned_cols=47 Identities=15% Similarity=0.097 Sum_probs=33.6
Q ss_pred CEEEEecCCcchhhHHHH----HHHHh--------CCceEEecCCCchhHHHHHHHHhc
Q 008692 448 RRIIATGGASANQTILSC----LASIY--------GCDIYTVQRPDSASLGAALRAAHG 494 (557)
Q Consensus 448 ~~i~~~GGga~s~~w~Qi----~Advl--------g~pv~~~~~~e~~alGAA~lA~~a 494 (557)
..|.+.||.-+.|.+.+. +.+++ +.+|......+++.+|||++|+++
T Consensus 385 ~~V~vdGsv~~~p~f~~~l~~~l~~l~~~~~~~~~~~~v~~~~~~dgsg~GAAl~aa~~ 443 (457)
T 2yhx_A 385 GHIAAXGSXRSYSGFSXNSATXNXNIYGWPQSAXXSKPIXITPAIDGXGAASXVIXSIA 443 (457)
T ss_dssp EEEEEESTTTTSTTHHHHHHHHHHHHHCCCCSSGGGSSEEEEECCCTTTHHHHHHHHHH
T ss_pred EEEEEECCcccCchHHHHHHHHHHHhhCcccccccCcceEEEECCCchhhhHHHHHHHH
Confidence 456666666344555544 44666 447888888899999999999998
No 132
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}
Probab=52.49 E-value=30 Score=35.49 Aligned_cols=48 Identities=10% Similarity=0.039 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHHHHHcCC--CCCCCEEEEecCCc-chhhHHHHHHHHhC
Q 008692 423 VRALVEGQFLSMRGHAERFGL--PSPPRRIIATGGAS-ANQTILSCLASIYG 471 (557)
Q Consensus 423 ~rAvlEgia~~~r~~~~~l~~--~~~~~~i~~~GGga-~s~~w~Qi~Advlg 471 (557)
++-++|-.+|.++..+-.+.. + .++.|++|||.. +|+..++.+.+-++
T Consensus 298 A~lA~d~f~yri~k~IGa~~a~Lg-gvDaIVFTgGIGEns~~vR~~i~~~l~ 348 (403)
T 2iir_A 298 CKLVLEIYDYRIAKYIGAYAAAMN-GVDAIVFTAGVGENSPITREDVCSYLE 348 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT-CCSEEEEEHHHHTTCHHHHHHHHHTTG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-CCCEEEECcccccCCHHHHHHHHhhhh
Confidence 445788888888877765432 4 689999999999 88888877665543
No 133
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=52.37 E-value=22 Score=36.05 Aligned_cols=70 Identities=9% Similarity=0.120 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHHHHcCC--CCCCCEEEEecCCcchhh-HHHHHHHHhCC--ceEEe-cCC--CchhHHHHHHHH
Q 008692 423 VRALVEGQFLSMRGHAERFGL--PSPPRRIIATGGASANQT-ILSCLASIYGC--DIYTV-QRP--DSASLGAALRAA 492 (557)
Q Consensus 423 ~rAvlEgia~~~r~~~~~l~~--~~~~~~i~~~GGga~s~~-w~Qi~Advlg~--pv~~~-~~~--e~~alGAA~lA~ 492 (557)
++.+++-.+..+...+-.+.. +..++.|+++||.+++.. +.+.+.+.+.. |+.+. ... ++.++|||.++.
T Consensus 270 a~~~l~~~~~~la~~i~~l~~~l~~~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~~ 347 (381)
T 1saz_A 270 AKRVYRAMAYQIAKWIGKMAAVLKGEVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVLR 347 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHHc
Confidence 444555555554444433221 125789999999986533 54444444432 44443 222 267889988763
No 134
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=52.01 E-value=48 Score=33.40 Aligned_cols=70 Identities=13% Similarity=0.097 Sum_probs=41.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEecCCcch-hhHHHHHHHHh--------CCceEEec-CCCchhHHHHHH
Q 008692 421 SEVRALVEGQFLSMRGHAERFGLPSPPRRIIATGGASAN-QTILSCLASIY--------GCDIYTVQ-RPDSASLGAALR 490 (557)
Q Consensus 421 ~l~rAvlEgia~~~r~~~~~l~~~~~~~~i~~~GGga~s-~~w~Qi~Advl--------g~pv~~~~-~~e~~alGAA~l 490 (557)
.+++-..+.++..+..++..+ .++.|++.||.++. +.+.+.+...+ ..+|.... ..+++++|||.+
T Consensus 293 ~~l~~~~~~La~~i~~l~~~l----dP~~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~~a~~~GAa~l 368 (380)
T 2hoe_A 293 EYFDDIARYFSIGLLNLIHLF----GISKIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEPVIAFGAAVH 368 (380)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH----CCCEEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHh----CCCEEEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCCcHHHHHHHHH
Confidence 344444455555555555555 35788888888754 44443333222 23555554 345789999998
Q ss_pred HHhc
Q 008692 491 AAHG 494 (557)
Q Consensus 491 A~~a 494 (557)
+...
T Consensus 369 ~~~~ 372 (380)
T 2hoe_A 369 ALEN 372 (380)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 135
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=50.99 E-value=36 Score=30.33 Aligned_cols=22 Identities=18% Similarity=0.226 Sum_probs=20.3
Q ss_pred EEEEEEccCCceEEEEEcCCCC
Q 008692 11 LFLGFDSSTQSLKATVLDSNLN 32 (557)
Q Consensus 11 ~~lgIDiGTts~Ka~l~d~~G~ 32 (557)
.+||||-|++.+--.++|.+|+
T Consensus 2 rILGIDPGl~~tG~gvi~~~g~ 23 (166)
T 4ep4_A 2 VVAGIDPGITHLGLGVVAVEGK 23 (166)
T ss_dssp EEEEEECCSSEEEEEEEEECSS
T ss_pred EEEEEccccCceEEEEEEecCC
Confidence 4899999999999999999876
No 136
>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces cerevisiae}
Probab=50.32 E-value=30 Score=40.77 Aligned_cols=31 Identities=6% Similarity=0.157 Sum_probs=26.5
Q ss_pred CcEEEEEEccC-----CceEEEEEcCCCCEEEEEee
Q 008692 9 DSLFLGFDSST-----QSLKATVLDSNLNIVASEQL 39 (557)
Q Consensus 9 ~~~~lgIDiGT-----ts~Ka~l~d~~G~~v~~~~~ 39 (557)
.+-+||||-|. +++|++++|.+|+++.....
T Consensus 515 ~~~VlaldpG~r~~g~~g~k~a~vD~~G~vl~~~~i 550 (1219)
T 3psi_A 515 IPKILSLTCGQGRFGADAIIAVYVNRKGDFIRDYKI 550 (1219)
T ss_dssp CCCEEEEECTTCCTTTTCEEEEEECTTSCEEEEEEE
T ss_pred CCeEEEecCCCCCCCCCceEEEEECCCCCEEEEEEE
Confidence 35789999985 48999999999999988765
No 137
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=48.44 E-value=9.5 Score=40.49 Aligned_cols=19 Identities=26% Similarity=0.387 Sum_probs=16.9
Q ss_pred EEEEEEccCCceEEEEEcC
Q 008692 11 LFLGFDSSTQSLKATVLDS 29 (557)
Q Consensus 11 ~~lgIDiGTts~Ka~l~d~ 29 (557)
.++|||+|||++++++.+.
T Consensus 3 ~~iGIDlGTt~s~va~~~~ 21 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEG 21 (509)
T ss_dssp CEEEEEECSSEEEEEEEET
T ss_pred CEEEEEcCCceEEEEEEEC
Confidence 4899999999999999863
No 138
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=48.27 E-value=35 Score=30.12 Aligned_cols=23 Identities=17% Similarity=0.221 Sum_probs=20.5
Q ss_pred EEEEEEccCCceEEEEEcCCCCE
Q 008692 11 LFLGFDSSTQSLKATVLDSNLNI 33 (557)
Q Consensus 11 ~~lgIDiGTts~Ka~l~d~~G~~ 33 (557)
.+||||-|++.+--++++.+|+.
T Consensus 2 ~ILGIDPGl~~tG~gvi~~~g~~ 24 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIRQVGRQ 24 (158)
T ss_dssp EEEEEECCSSEEEEEEEEEETTE
T ss_pred EEEEEccCCCCeeEEEEEecCCe
Confidence 48999999999999999988873
No 139
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=47.77 E-value=33 Score=31.96 Aligned_cols=62 Identities=8% Similarity=0.052 Sum_probs=40.7
Q ss_pred EEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhcCCCCC
Q 008692 11 LFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDLSK 90 (557)
Q Consensus 11 ~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~~~~~~ 90 (557)
++|+||.-|..+-++|++ +|+++ +...... . ++.+.+...+.+++++.- ....+
T Consensus 13 ~iLaidTS~~~~sval~~-~~~~l-~~~~~~~------------r----------~Hse~L~p~i~~~L~~a~--~~~~d 66 (218)
T 2a6a_A 13 MNVLALDTSQRIRIGLRK-GEDLF-EISYTGE------------K----------KHAEILPVVVKKLLDELD--LKVKD 66 (218)
T ss_dssp CEEEEEECSSSEEEEEEE-TTEEE-EEEEESC------------G----------GGGGHHHHHHHHHHHHHT--CCGGG
T ss_pred eEEEEEcCCcCeEEEEEE-CCEEE-EEEecch------------H----------HHHHHHHHHHHHHHHHcC--CCHHH
Confidence 689999999999999998 56676 3221111 1 111256666666555432 45678
Q ss_pred eeEEEEec
Q 008692 91 VTAVSGSG 98 (557)
Q Consensus 91 I~aIgis~ 98 (557)
|.+|+++.
T Consensus 67 ld~Iav~~ 74 (218)
T 2a6a_A 67 LDVVGVGI 74 (218)
T ss_dssp CSEEEEEC
T ss_pred CCEEEEEc
Confidence 99999886
No 140
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=47.72 E-value=7.8 Score=42.22 Aligned_cols=21 Identities=19% Similarity=0.346 Sum_probs=17.3
Q ss_pred EEEEEEccCCceEEEEEcCCCC
Q 008692 11 LFLGFDSSTQSLKATVLDSNLN 32 (557)
Q Consensus 11 ~~lgIDiGTts~Ka~l~d~~G~ 32 (557)
.++|||+|||++++++++ +|+
T Consensus 3 ~viGIDlGTt~s~va~~~-~g~ 23 (605)
T 2kho_A 3 KIIGIDLGTTNSCVAIMD-GTT 23 (605)
T ss_dssp -CEEEECCSSEEEEEEEE-TTE
T ss_pred CEEEEEcCCcCEEEEEEE-CCE
Confidence 479999999999999986 453
No 141
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=47.39 E-value=53 Score=30.43 Aligned_cols=62 Identities=19% Similarity=0.303 Sum_probs=39.5
Q ss_pred EEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhcCCCCC
Q 008692 11 LFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDLSK 90 (557)
Q Consensus 11 ~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~~~~~~ 90 (557)
.+|+||..|..+-++|++ +|+++..... .+. ++.+.+...+.+++++.- ....+
T Consensus 3 ~iLaIdTS~~~~svAl~~-~~~~~~~~~~-----------------~~~------~Hs~~L~p~i~~~L~~a~--~~~~d 56 (213)
T 3r6m_A 3 KILAIDTATENCSVALLV-NDQVISRSEV-----------------APR------DHTKKVLPMVDEVLKEAG--LTLQD 56 (213)
T ss_dssp CEEEEECSSSEEEEEEES-SSCEEEEEEE-----------------CCS------CCHHHHHHHHHHHHHTTT--CCTTT
T ss_pred EEEEEEccCcceEEEEEE-CCEEEEEEEe-----------------chH------HHHHHHHHHHHHHHHHcC--CCHHH
Confidence 489999999999999998 4787765311 000 112255554444444221 56788
Q ss_pred eeEEEEec
Q 008692 91 VTAVSGSG 98 (557)
Q Consensus 91 I~aIgis~ 98 (557)
|.+|+++.
T Consensus 57 ld~Iav~~ 64 (213)
T 3r6m_A 57 LDALAFGR 64 (213)
T ss_dssp CSEEEEEE
T ss_pred ccEEEEec
Confidence 99999886
No 142
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=46.82 E-value=5.7 Score=38.73 Aligned_cols=67 Identities=13% Similarity=0.066 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEecCCcchhhHHHHHHHHhCC---ceEEecCCCchhHHHHHHHHh
Q 008692 422 EVRALVEGQFLSMRGHAERFGLPSPPRRIIATGGASANQTILSCLASIYGC---DIYTVQRPDSASLGAALRAAH 493 (557)
Q Consensus 422 l~rAvlEgia~~~r~~~~~l~~~~~~~~i~~~GGga~s~~w~Qi~Advlg~---pv~~~~~~e~~alGAA~lA~~ 493 (557)
.++.+++-.+..+...+ .+..-..++.|++.||.+++ ++ +.+...+.. ++..+ .+++++|||++|..
T Consensus 209 ~A~~i~~~~~~~La~~i-~~~~~~~p~~vvlgGGv~~~-l~-~~l~~~l~~~~~~i~~~--~~a~~~GAa~la~~ 278 (291)
T 1zxo_A 209 AIRQLVMNSFIAFFRRN-VMQYDYKQYPVHFIGSIAYC-YK-EILQDAARQTGIQIGKI--LQSPMEGLIQYHSQ 278 (291)
T ss_dssp TTTHHHHHHHHHHHTTT-GGGSCTTTSCEEECSHHHHH-TH-HHHHHHTTTTTCCEEEE--CSCTHHHHHTTSSS
T ss_pred HHHHHHHHHHHHHHHHH-hcccCCCCceEEEECcHHHH-HH-HHHHHHHhcCCcEEeec--CCCHHHHHHHHHHH
Confidence 34455555555554444 33211256788888888887 44 444444443 44443 46888999987643
No 143
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=46.41 E-value=10 Score=37.78 Aligned_cols=24 Identities=17% Similarity=0.187 Sum_probs=18.1
Q ss_pred CCCCCCCCCcEEEEEEccCCceEEEEE
Q 008692 1 MEDYSLPKDSLFLGFDSSTQSLKATVL 27 (557)
Q Consensus 1 ~~~~~~~~~~~~lgIDiGTts~Ka~l~ 27 (557)
||. |+.+++||||+|.+++|++-.
T Consensus 1 ~~~---~~~~~iigiD~G~~~~K~~~~ 24 (329)
T 4apw_A 1 MEN---ITNEYVMTLDAGKYETKLIGK 24 (329)
T ss_dssp -------CCEEEEEEEECSSEEEEEEH
T ss_pred CCC---ccCceEEEEecCCceEEEEec
Confidence 455 667899999999999999963
No 144
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=45.83 E-value=28 Score=36.97 Aligned_cols=33 Identities=12% Similarity=0.151 Sum_probs=24.4
Q ss_pred cEEEEEEccCCceEEEEEcCCC---CEEEEEeeecc
Q 008692 10 SLFLGFDSSTQSLKATVLDSNL---NIVASEQLQFD 42 (557)
Q Consensus 10 ~~~lgIDiGTts~Ka~l~d~~G---~~v~~~~~~~~ 42 (557)
+.+-+||+||.|+|.++++.++ .++...+....
T Consensus 15 ~~~AaIDiGSNS~rL~I~~~~~~~~~~~~~~k~~vr 50 (508)
T 3hi0_A 15 APVSVIDIGSNSVRLVVYEGLSRAPAVLFNEKVLCG 50 (508)
T ss_dssp CCEEEEEECSSEEEEEEESCSSSSCCEEEEEEEECC
T ss_pred CeEEEEEECCccEEEEEEEEcCCCceEEEEEeEEee
Confidence 5688999999999999999753 35555444443
No 145
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=44.86 E-value=69 Score=32.44 Aligned_cols=49 Identities=10% Similarity=-0.061 Sum_probs=30.6
Q ss_pred CHHHHHHcCCCCCCeEEEcCChhhhhhhcc---CC--CCCCcEEEEecccceeccccCC
Q 008692 261 APYFVERFHFNKNCLVVQWSGDNPNSLAGL---TL--STSGDLAISLGTSDTVFGITDD 314 (557)
Q Consensus 261 ~~~~a~~~GL~~g~pV~~G~~D~~aa~~g~---g~--~~~g~~~~~~GTs~~~~~~~~~ 314 (557)
.+.+.+++| +||.. ..|..|+++|- |. -....+++++||+-....+.+.
T Consensus 179 ~~~l~~~~~----~pv~v-~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG~giv~~G 232 (406)
T 1z6r_A 179 GEALEQHTG----VPVYI-QHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVITDG 232 (406)
T ss_dssp HHHHHHHHS----SCEEE-EEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEETT
T ss_pred HHHHHHHHC----CCEEE-echhHHHHHHHHHhcCCCCCCcEEEEEECCcEEEEEEECC
Confidence 344555664 45554 67888887762 22 2345688999998665555553
No 146
>4h0p_A Acetate kinase; askha (acetate and sugar kinas actin) superfamily, ribonuclease H-like fold, transferase; 1.89A {Cryptococcus neoformans}
Probab=44.65 E-value=20 Score=37.04 Aligned_cols=48 Identities=4% Similarity=0.031 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHHHHcCC--C-----CCCCEEEEecCCc-chhhHHHHHHHHh
Q 008692 423 VRALVEGQFLSMRGHAERFGL--P-----SPPRRIIATGGAS-ANQTILSCLASIY 470 (557)
Q Consensus 423 ~rAvlEgia~~~r~~~~~l~~--~-----~~~~~i~~~GGga-~s~~w~Qi~Advl 470 (557)
++-++|..+|.++..+-.+.. + ..++.|+++||.. +|+..++.+.+-+
T Consensus 322 A~lA~d~f~yri~k~IGa~aa~L~~~~~~G~vDaIVFTGGIGEns~~iR~~i~~~l 377 (438)
T 4h0p_A 322 AKLTYAVFLDRLLNFVAQYLFKLLSEVPIESIDGLVFSGGIGEKGAELRRDVLKKL 377 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGSCEEEEEHHHHHHCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCEEEECCccccCcHHHHHHHHHhH
Confidence 566788888888877765431 2 3689999999975 8888887665544
No 147
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=44.24 E-value=21 Score=37.33 Aligned_cols=49 Identities=22% Similarity=0.257 Sum_probs=33.5
Q ss_pred HHHHHcCCCCCCeEEEcCChhhhhhhccCCCCCC-cEEEEecccceeccccC
Q 008692 263 YFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSG-DLAISLGTSDTVFGITD 313 (557)
Q Consensus 263 ~~a~~~GL~~g~pV~~G~~D~~aa~~g~g~~~~g-~~~~~~GTs~~~~~~~~ 313 (557)
++-++-|+| +.|++-.-|+.+++++..-..+. .+.+++||+..-..+.+
T Consensus 180 ~al~r~~l~--v~v~al~NDtv~tlla~~y~~~~~~iglIlGTG~na~yve~ 229 (451)
T 1bdg_A 180 TELDKRELN--VKCVAVVNDTVGTLASCALEDPKCAVGLIVGTGTNVAYIED 229 (451)
T ss_dssp HHHHTTTCC--EEEEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEE
T ss_pred HHHHHcCCC--cceEEEEEchHHHHHHhcccCCCcEEEEEEeCCcceEEEEc
Confidence 333333663 66778899999999986665544 46789999865555444
No 148
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=43.66 E-value=20 Score=36.28 Aligned_cols=34 Identities=21% Similarity=0.386 Sum_probs=27.9
Q ss_pred cEEEEEEccCC--ceEEEEEcCCC--CEEEEEeeeccC
Q 008692 10 SLFLGFDSSTQ--SLKATVLDSNL--NIVASEQLQFDS 43 (557)
Q Consensus 10 ~~~lgIDiGTt--s~Ka~l~d~~G--~~v~~~~~~~~~ 43 (557)
+++||+=.||| ++-+++++.+| +++...+.+|+.
T Consensus 2 ~~~IGlMSGTSlDGID~alv~~~~~~~l~~~~~~py~~ 39 (371)
T 3qbx_A 2 PRYLGLMSGTSLDGMDIVLIEQGDRTTLLASHYLPMPA 39 (371)
T ss_dssp CEEEEEECCSSCSEEEEEEEEESSSEEEEEEEEEECCH
T ss_pred cEEEEEecccChhhhhEEEEEecCCceecceeeecCCH
Confidence 48999999998 89999998877 567777778763
No 149
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=43.49 E-value=82 Score=32.22 Aligned_cols=67 Identities=10% Similarity=0.114 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCEEEEecCCcc-hhhHHHHHHH----H-h-----CCceEEec-CCCchhHHHHHH
Q 008692 423 VRALVEGQFLSMRGHAERFGLPSPPRRIIATGGASA-NQTILSCLAS----I-Y-----GCDIYTVQ-RPDSASLGAALR 490 (557)
Q Consensus 423 ~rAvlEgia~~~r~~~~~l~~~~~~~~i~~~GGga~-s~~w~Qi~Ad----v-l-----g~pv~~~~-~~e~~alGAA~l 490 (557)
++-..+.++..+..++..+ .++.|++.||.++ .+.+.+.+-. . + ..+|.... ..+ +++|||.+
T Consensus 338 l~~~~~~L~~~i~~l~~~l----dP~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~I~~s~l~~~-~~~GAa~l 412 (429)
T 1z05_A 338 IQQLGRYLGAAIAIVINLF----NPEKILIGGVINQAKSILYPSIEQCIREQSLPVYHQDLKLVESRFYKQ-ATMPGAAL 412 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHH----CCSEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCSSC-TTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhc----CCCEEEEeCccccchHHHHHHHHHHHHHhcccccCCCcEEEEecCCCc-cHHHHHHH
Confidence 3333444444444444444 3578888888876 3444332222 1 1 34566654 345 89999998
Q ss_pred HHhc
Q 008692 491 AAHG 494 (557)
Q Consensus 491 A~~a 494 (557)
+...
T Consensus 413 ~~~~ 416 (429)
T 1z05_A 413 IKQA 416 (429)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8654
No 150
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=43.47 E-value=35 Score=33.48 Aligned_cols=67 Identities=13% Similarity=0.108 Sum_probs=37.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEecCCcch-hhHHHHHHHH----h----CCceEEec-CCCchhHHHHHH
Q 008692 421 SEVRALVEGQFLSMRGHAERFGLPSPPRRIIATGGASAN-QTILSCLASI----Y----GCDIYTVQ-RPDSASLGAALR 490 (557)
Q Consensus 421 ~l~rAvlEgia~~~r~~~~~l~~~~~~~~i~~~GGga~s-~~w~Qi~Adv----l----g~pv~~~~-~~e~~alGAA~l 490 (557)
.+++-..+-++..+..++..+ .++.|++.||.++. +++.++...+ + ..+|.... ..+++++|||.+
T Consensus 248 ~il~~~~~~La~~i~~l~~~l----~p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~i~~s~~~~~a~~~GAa~l 323 (327)
T 2ap1_A 248 AHVERYLDLLAVCLGNILTIV----DPDLLVIGGGLSNFTAITTQLAERLPRHLLPVARAPRIERARHGDAGGMRGAAFL 323 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH----CCSEEEEESGGGGSTHHHHSSGGGSGGGSCTTCCCCEEEECSCTTTHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHh----CCCEEEEeChhhcchhHHHHHHHHHHHhhccccCCCEEEEcCCCCcHHHHHHHHH
Confidence 334444445555555555554 35678888888764 4444422221 1 23455544 345788999987
Q ss_pred H
Q 008692 491 A 491 (557)
Q Consensus 491 A 491 (557)
|
T Consensus 324 a 324 (327)
T 2ap1_A 324 H 324 (327)
T ss_dssp T
T ss_pred H
Confidence 5
No 151
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=43.41 E-value=11 Score=37.54 Aligned_cols=20 Identities=15% Similarity=0.017 Sum_probs=16.2
Q ss_pred EEEEEEccCCceEEEEEcCCC
Q 008692 11 LFLGFDSSTQSLKATVLDSNL 31 (557)
Q Consensus 11 ~~lgIDiGTts~Ka~l~d~~G 31 (557)
..+|||+|||++|+++. .+|
T Consensus 4 ~~igIDlGT~~s~v~~~-~~~ 23 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLR-GKG 23 (344)
T ss_dssp CEEEEEECSSEEEEEET-TTE
T ss_pred ceEEEEcCcCcEEEEEC-CCC
Confidence 47999999999999864 344
No 152
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=43.12 E-value=31 Score=36.31 Aligned_cols=59 Identities=14% Similarity=0.187 Sum_probs=38.6
Q ss_pred cEEEEEEccCCceEEEEEcCCCCE-EEEEeeeccCCCCCCCCCCceeeC-CCCCCCccCChhHHHHHHHHHHHHHhhc
Q 008692 10 SLFLGFDSSTQSLKATVLDSNLNI-VASEQLQFDSELPHYKTKDGVYRD-PSNNGRIVSPTLMWIEALDLMLQKLSKS 85 (557)
Q Consensus 10 ~~~lgIDiGTts~Ka~l~d~~G~~-v~~~~~~~~~~~p~~g~~~~~eqd-~~~~~~~~~~~~~~~~a~~~~~~~l~~~ 85 (557)
-.+|+||+|.|++|+++++.+|+- .......+++ |.. ..+. .+ ++++.+.+++.+..+.
T Consensus 80 G~~LalDlGGTn~Rv~~V~l~g~~~~~~~~~~~~I--p~~-----~~~~~~~----------~lfd~Ia~~i~~fl~~ 140 (485)
T 3o8m_A 80 GDFLALDLGGTNLRVVLVKLGGNHDFDTTQNKYRL--PDH-----LRTGTSE----------QLWSFIAKCLKEFVDE 140 (485)
T ss_dssp EEEEEEEESSSEEEEEEEEEESSSCEEEEEEEEEC--CTT-----GGGSBHH----------HHHHHHHHHHHHHHHH
T ss_pred eEEEEEEecCCeEEEEEEEECCCCceEEEEEEEec--Cch-----hccCCHH----------HHHHHHHHHHHHHHHH
Confidence 378999999999999999998762 1111222332 221 1222 33 8999999988886653
No 153
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=42.98 E-value=15 Score=37.07 Aligned_cols=20 Identities=10% Similarity=0.120 Sum_probs=18.3
Q ss_pred cEEEEEEccCCceEEEEEcC
Q 008692 10 SLFLGFDSSTQSLKATVLDS 29 (557)
Q Consensus 10 ~~~lgIDiGTts~Ka~l~d~ 29 (557)
++++.||+||+++|..|++.
T Consensus 3 ~~~avID~GSns~Rl~I~~~ 22 (353)
T 3aap_A 3 SCIAVIDAGSTGSRLHIYSY 22 (353)
T ss_dssp EEEEEEEECSSCEEEEEEEE
T ss_pred CEEEEEEcCCCCeEEEEEEE
Confidence 57899999999999999985
No 154
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=42.53 E-value=23 Score=35.58 Aligned_cols=74 Identities=16% Similarity=0.084 Sum_probs=45.8
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHH-cCCCCCCCEEEEecCCcchhh--HHHHHHHHhCCceEEecCCCchhHHHHHHHHhc
Q 008692 418 DPPSEVRALVEGQFLSMRGHAER-FGLPSPPRRIIATGGASANQT--ILSCLASIYGCDIYTVQRPDSASLGAALRAAHG 494 (557)
Q Consensus 418 ~~~~l~rAvlEgia~~~r~~~~~-l~~~~~~~~i~~~GGga~s~~--w~Qi~Advlg~pv~~~~~~e~~alGAA~lA~~a 494 (557)
+-.++++..++-++-.+...+.. +.....++.|+++||||.-.. +.+.+.+.+ |.. .+...+.|+|...++..-
T Consensus 261 di~~~i~~a~~~~~~~I~~~i~~~l~~~~~~~~Ivl~GGGa~l~~~~l~~~i~~~~--~~~-~~p~~anA~G~~~~~~~~ 337 (355)
T 3js6_A 261 DFKDEFYKEQDSLIEEVMSNFEITVGNINSIDRIIVTGGGANIHFDSLSHYYSDVF--EKA-DDSQFSNVRGYEKLGELL 337 (355)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHTCCTTSCSEEEEESTTHHHHHHHHHHHSSSCE--ECC-SSGGGHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhchhhccEEEEECcchhcchhhHHHHHHHHC--CCC-CCcHHHHHHHHHHHHHHH
Confidence 45556666666555555544443 332234689999999997443 445677766 333 344458899999887654
No 155
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=41.73 E-value=46 Score=31.21 Aligned_cols=62 Identities=18% Similarity=0.161 Sum_probs=38.5
Q ss_pred EEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhhcCCCCC
Q 008692 11 LFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDLSK 90 (557)
Q Consensus 11 ~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~~~~~~~ 90 (557)
.+|+||.-|..+-++|++ +|+++... .. ... ++.+.+...+.+++++.- ....+
T Consensus 2 ~iL~idTs~~~~sval~~-~~~~~~~~-~~----------------~~~------~h~~~l~~~i~~~L~~a~--~~~~d 55 (231)
T 2gel_A 2 RILAIDTATEACSVALWN-NGTINAHF-EL----------------CPR------EHTQRILPMVQEILAASG--ASLNE 55 (231)
T ss_dssp EEEEEECSSSEEEEEEEE-TTEEEEEE-EE----------------CCS------CCHHHHHHHHHHHHHHTT--CCGGG
T ss_pred eEEEEECCCcCeEEEEEE-CCEEEEEE-hh----------------hhH------HHHHHHHHHHHHHHHHcC--CCHHH
Confidence 589999999999999998 56665421 11 111 111255555555544321 45678
Q ss_pred eeEEEEec
Q 008692 91 VTAVSGSG 98 (557)
Q Consensus 91 I~aIgis~ 98 (557)
|.+|+++.
T Consensus 56 id~Iav~~ 63 (231)
T 2gel_A 56 IDALAFGR 63 (231)
T ss_dssp CSEEEEEC
T ss_pred CCEEEEEc
Confidence 99999976
No 156
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=41.62 E-value=26 Score=34.11 Aligned_cols=67 Identities=13% Similarity=0.078 Sum_probs=40.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEecCCcch--hhHHHHHHHHhCCceEEecCCCchhHHHHHHHHhc
Q 008692 421 SEVRALVEGQFLSMRGHAERFGLPSPPRRIIATGGASAN--QTILSCLASIYGCDIYTVQRPDSASLGAALRAAHG 494 (557)
Q Consensus 421 ~l~rAvlEgia~~~r~~~~~l~~~~~~~~i~~~GGga~s--~~w~Qi~Advlg~pv~~~~~~e~~alGAA~lA~~a 494 (557)
..++.+++-.+..+...+..+.. ..++.|++.||.+++ +.+.+-+... +.. ...++++|||++|...
T Consensus 226 ~~A~~i~~~~~~~L~~~l~~l~~-~~p~~VvlgGgv~~~~~~~l~~~l~~~----i~~--~~~~~~~GAa~la~~~ 294 (305)
T 1zc6_A 226 PEADALLRQAGEDAWAIARALDP-QDELPVALCGGLGQALRDWLPPGFRQR----LVA--PQGDSAQGALLLLQRP 294 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCT-TCCSCEEEESHHHHHTGGGSCHHHHHH----CCC--CSSCHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc-CCCCeEEEECCchHhHHHHHHHHHHhh----ccC--CCCCHHHHHHHHHhhh
Confidence 45666777777666666666543 256788888888753 3333333322 222 3467889999987543
No 157
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=40.15 E-value=54 Score=31.90 Aligned_cols=69 Identities=14% Similarity=0.109 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEecCCcchhhHHH-H---HHHHh----CC---------ceEEec-CCCch
Q 008692 422 EVRALVEGQFLSMRGHAERFGLPSPPRRIIATGGASANQTILS-C---LASIY----GC---------DIYTVQ-RPDSA 483 (557)
Q Consensus 422 l~rAvlEgia~~~r~~~~~l~~~~~~~~i~~~GGga~s~~w~Q-i---~Advl----g~---------pv~~~~-~~e~~ 483 (557)
.++-..+.++..+..++..+ .++.|++.||.++.+.+.+ + +...+ .. +|.... ..++.
T Consensus 204 ~~~~~~~~La~~i~nl~~~l----dPe~IviGGgi~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~I~~s~lg~~a~ 279 (302)
T 3epq_A 204 VWELEGYYIAQALAQYILIL----APXXIILGGGVMQQXQVFSYIYQYVPKIMNSYLDFSELSDDISDYIVPPRLGSNAG 279 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHT----CCSCEEEESSGGGCTHHHHHHHHHHHHHHTTCSCCGGGTTTGGGTEECCTTGGGHH
T ss_pred HHHHHHHHHHHHHHHHHHHH----CchhhhcCchhhhhHHHHHHHHHHHHHHHhhhccCcccccccCceEEECCcCChHH
Confidence 34444556666666666665 4678999998886543332 2 22222 12 244444 33577
Q ss_pred hHHHHHHHHhc
Q 008692 484 SLGAALRAAHG 494 (557)
Q Consensus 484 alGAA~lA~~a 494 (557)
++|||.++...
T Consensus 280 l~GAa~l~~~~ 290 (302)
T 3epq_A 280 IIGTLVLAHQA 290 (302)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88999998755
No 158
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=40.03 E-value=60 Score=32.50 Aligned_cols=68 Identities=9% Similarity=0.014 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEecC-CcchhhHHH------HHH-HHh-----------CCceEEec-CCC
Q 008692 422 EVRALVEGQFLSMRGHAERFGLPSPPRRIIATGG-ASANQTILS------CLA-SIY-----------GCDIYTVQ-RPD 481 (557)
Q Consensus 422 l~rAvlEgia~~~r~~~~~l~~~~~~~~i~~~GG-ga~s~~w~Q------i~A-dvl-----------g~pv~~~~-~~e 481 (557)
+++-..+-++..+..++..+ .++.|++.|| .++++.+.+ .+. ..+ ..||.+.. ..+
T Consensus 284 ~l~~~~~~L~~~i~~l~~~l----~p~~IvlgGG~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 359 (373)
T 2q2r_A 284 AMKKYHEYLMRVGSEASMAL----LPLTIVLVGDNIVNNAFFYRNPQNLKEMHHEALNHEMERFGFQSRVSYLRQKKLLN 359 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHH----CCSEEEECSHHHHHTHHHHHSHHHHHHHHHHHTCSGGGGGTSGGGCEEEEECSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHH----CCCEEEEeCChHhCchhhhcchhHHHHHHHHHhhcccchhhhhcCCcEEEEecCCc
Confidence 33444444444444444444 3466777677 556555544 222 222 34566653 456
Q ss_pred chhHHHHHHHHh
Q 008692 482 SASLGAALRAAH 493 (557)
Q Consensus 482 ~~alGAA~lA~~ 493 (557)
++++|||.++..
T Consensus 360 a~l~GAa~l~~~ 371 (373)
T 2q2r_A 360 LNLMGCYRCGLD 371 (373)
T ss_dssp HHHHHHHHHHHH
T ss_pred hhHHHHHHHHHh
Confidence 889999998753
No 159
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=39.36 E-value=17 Score=38.88 Aligned_cols=35 Identities=14% Similarity=0.147 Sum_probs=30.7
Q ss_pred CCCEEEEecCCcchhhHHHHHHHHhCC-ceEEecCC
Q 008692 446 PPRRIIATGGASANQTILSCLASIYGC-DIYTVQRP 480 (557)
Q Consensus 446 ~~~~i~~~GGga~s~~w~Qi~Advlg~-pv~~~~~~ 480 (557)
.+..|+++||+|+.+-..|+..++|+. +|.+-...
T Consensus 550 ~i~~VVLTGGsSql~gI~elA~~iL~~~~VRiGrP~ 585 (607)
T 1nbw_A 550 DIAFVVLVGGSSLDFEIPQLITEALSHYGVVAGQGN 585 (607)
T ss_dssp TCCEEEEESGGGGSSSHHHHHHHHHHTTTCEEEECC
T ss_pred ccCCEEEeCchhhcccHHHHHHHHhCcCCeEEecCC
Confidence 458899999999999999999999999 99875443
No 160
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=39.18 E-value=37 Score=34.92 Aligned_cols=48 Identities=17% Similarity=0.117 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHHHHcCC-CCCCCEEEEecCCc-chhhHHHHHHHHh
Q 008692 423 VRALVEGQFLSMRGHAERFGL-PSPPRRIIATGGAS-ANQTILSCLASIY 470 (557)
Q Consensus 423 ~rAvlEgia~~~r~~~~~l~~-~~~~~~i~~~GGga-~s~~w~Qi~Advl 470 (557)
++-++|-.+|.++..+-.+.. =..++.|++|||.. +|+..++.+.+-+
T Consensus 306 A~lA~d~f~yri~k~IGa~aa~LggvDaIVFTgGIGEns~~vR~~i~~~l 355 (415)
T 2e1z_A 306 ARLAIKTFVHRIARHIAGHAASLHRLDGIIFTGGIGENSVLIRQLVIEHL 355 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCSSCCEEEEEHHHHHHCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECccccccCHHHHHHHHhhH
Confidence 344888889998888776542 12589999999999 8888887766543
No 161
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=38.55 E-value=12 Score=41.21 Aligned_cols=18 Identities=17% Similarity=0.193 Sum_probs=16.3
Q ss_pred EEEEEccCCceEEEEEcC
Q 008692 12 FLGFDSSTQSLKATVLDS 29 (557)
Q Consensus 12 ~lgIDiGTts~Ka~l~d~ 29 (557)
++|||+|||++++++++.
T Consensus 4 ~iGIDlGTtns~va~~~~ 21 (675)
T 3d2f_A 4 PFGLDLGNNNSVLAVARN 21 (675)
T ss_dssp CEEEECCSSEEEEEEEET
T ss_pred EEEEEcCCCcEEEEEEEC
Confidence 799999999999998864
No 162
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=37.73 E-value=41 Score=32.72 Aligned_cols=69 Identities=19% Similarity=0.217 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEecCCc-ch-hhHHHHHHHHhC--------CceEEecC-CCchhHHHHHH
Q 008692 422 EVRALVEGQFLSMRGHAERFGLPSPPRRIIATGGAS-AN-QTILSCLASIYG--------CDIYTVQR-PDSASLGAALR 490 (557)
Q Consensus 422 l~rAvlEgia~~~r~~~~~l~~~~~~~~i~~~GGga-~s-~~w~Qi~Advlg--------~pv~~~~~-~e~~alGAA~l 490 (557)
+++-..+.++..+..++..+ .++.|++.||.+ +. +.+.+.+.+.+. .+|..... .+++++|||.+
T Consensus 217 ~~~~~~~~l~~~i~~l~~~~----~p~~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~lg~~a~~~GAa~l 292 (302)
T 3vov_A 217 LVLQAARYVGIGLASLVKAF----DPGVVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAEAGLLGAALT 292 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHH----CCSEEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSSGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH----CCCEEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCCCCcHHHHHHHHH
Confidence 33444444444444444444 357888888887 54 444443333221 23555443 45778899998
Q ss_pred HHhc
Q 008692 491 AAHG 494 (557)
Q Consensus 491 A~~a 494 (557)
+...
T Consensus 293 ~~~~ 296 (302)
T 3vov_A 293 AYLE 296 (302)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8654
No 163
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=37.24 E-value=40 Score=31.99 Aligned_cols=59 Identities=22% Similarity=0.201 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHcCCCCCCCEEEEecCCcch-hhHHHHHHHHhCCceEEecC-CCchhHHHHHHHHhc
Q 008692 430 QFLSMRGHAERFGLPSPPRRIIATGGASAN-QTILSCLASIYGCDIYTVQR-PDSASLGAALRAAHG 494 (557)
Q Consensus 430 ia~~~r~~~~~l~~~~~~~~i~~~GGga~s-~~w~Qi~Advlg~pv~~~~~-~e~~alGAA~lA~~a 494 (557)
++..+..++..+ .++.|++.||.++. +.+.+.+. ...+|..... .+++++|||.++..-
T Consensus 202 l~~~l~~l~~~l----dP~~IvlgG~i~~~~~~~~~~~~--~~~~i~~s~l~~~a~~~GAa~l~~~~ 262 (267)
T 1woq_A 202 LQRYFSHVEFLF----SPELFIVGGGISKRADEYLPNLR--LRTPIVPAVLRNEAGIVGAAIEIALQ 262 (267)
T ss_dssp HHHHHHHHHHHH----CCSEEEEESGGGGGGGGTGGGCC--CSSCEEECSCSTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc----CCCEEEEeChhhcccHHHHHhhc--cCceEEECCcCCcHHHHHHHHHHHhc
Confidence 333344444444 35788888888764 44433222 2346666553 457889999987643
No 164
>4h0o_A Acetate kinase; askha (acetate and S kinase, HSC70, actin) superfamily, ribonuclease H-like fold transferase; 2.40A {Entamoeba histolytica}
Probab=36.53 E-value=33 Score=35.05 Aligned_cols=48 Identities=2% Similarity=-0.055 Sum_probs=34.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCC--CCCCCEEEEecCCc-chhhHHHHHHHH
Q 008692 421 SEVRALVEGQFLSMRGHAERFGL--PSPPRRIIATGGAS-ANQTILSCLASI 469 (557)
Q Consensus 421 ~l~rAvlEgia~~~r~~~~~l~~--~~~~~~i~~~GGga-~s~~w~Qi~Adv 469 (557)
.-++-++|..+|.++..+-.+.. +. ++.|++|||.. .|+..++.+.+-
T Consensus 300 ~~A~lA~d~f~yri~k~IGa~aa~L~G-vDaIVFTgGIGEns~~vR~~i~~~ 350 (404)
T 4h0o_A 300 KTCQLAFDVYIKQLAKTIGGLMVEIGG-LDLLVFTDQMGLEVWQVRKAICDK 350 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTC-CSEEEEEHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEECCccccCcHHHHHHHHhh
Confidence 34566889999998887765432 33 89999999974 767777665544
No 165
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=36.02 E-value=46 Score=35.57 Aligned_cols=36 Identities=8% Similarity=0.074 Sum_probs=31.5
Q ss_pred CCCEEEEecCCcchhhHHHHHHHHhCC-ceEEecCCC
Q 008692 446 PPRRIIATGGASANQTILSCLASIYGC-DIYTVQRPD 481 (557)
Q Consensus 446 ~~~~i~~~GGga~s~~w~Qi~Advlg~-pv~~~~~~e 481 (557)
.+..|+++||+|+.+-..|+..++|+. +|.+-....
T Consensus 548 ~i~~VVLTGGsSql~GI~ElA~~iL~~y~VRiGrP~~ 584 (610)
T 2d0o_A 548 DIPFVVLVGGSSLDFEVPQLVTDALAHYRLVAGRGNI 584 (610)
T ss_dssp GCCEEEEESGGGGCSSHHHHHHHHTTTSSCEEEECCG
T ss_pred ccCCEEEeCchhhcccHHHHHHHHhCcCCeEEecCCc
Confidence 458999999999999999999999999 998755443
No 166
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=35.44 E-value=12 Score=38.30 Aligned_cols=48 Identities=13% Similarity=0.169 Sum_probs=33.9
Q ss_pred CCEEEEecCCcchhhHHHHHHHHhCCc----------------------eEEec---CCCchhHHHHHHHHhc
Q 008692 447 PRRIIATGGASANQTILSCLASIYGCD----------------------IYTVQ---RPDSASLGAALRAAHG 494 (557)
Q Consensus 447 ~~~i~~~GGga~s~~w~Qi~Advlg~p----------------------v~~~~---~~e~~alGAA~lA~~a 494 (557)
+++|+++||+|+-+-+.+.+.+-++.. |.+.. ...++.+|++++|...
T Consensus 316 ~~~IvL~GG~s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl~ 388 (418)
T 1k8k_A 316 YKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLASTP 388 (418)
T ss_dssp HHCEEEESGGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTSH
T ss_pred HhceEEeCCccccccHHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcCc
Confidence 467999999999998887776644432 33332 2357889999998653
No 167
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=35.00 E-value=14 Score=39.56 Aligned_cols=32 Identities=13% Similarity=0.105 Sum_probs=22.2
Q ss_pred CcEEEEEEccCCceEEEEEc--CCCCE--EEEEeee
Q 008692 9 DSLFLGFDSSTQSLKATVLD--SNLNI--VASEQLQ 40 (557)
Q Consensus 9 ~~~~lgIDiGTts~Ka~l~d--~~G~~--v~~~~~~ 40 (557)
++|+.|||||.+++-++|-+ .+|++ +.+...+
T Consensus 1 m~~i~gvdign~tte~~la~~~~~~~~~f~~s~~~~ 36 (610)
T 2d0o_A 1 MRYIAGIDIGNSSTEVALATLDEAGALTITHSALAE 36 (610)
T ss_dssp CEEEEEEEECSSEEEEEEEEECTTCCEEEEEEEEEE
T ss_pred CcEEEEEecCCcchheeeeeecCCCceEEeeccccc
Confidence 36899999999999988755 34654 4444444
No 168
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=33.04 E-value=41 Score=34.53 Aligned_cols=47 Identities=9% Similarity=0.077 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHHHHcCC--CCCCCEEEEecCCc-chhhHHHHHHHHh
Q 008692 423 VRALVEGQFLSMRGHAERFGL--PSPPRRIIATGGAS-ANQTILSCLASIY 470 (557)
Q Consensus 423 ~rAvlEgia~~~r~~~~~l~~--~~~~~~i~~~GGga-~s~~w~Qi~Advl 470 (557)
++-++|-.+|.++..+-.+.. | .++.|++|||.. +|+..++.+.+-+
T Consensus 298 A~lA~d~f~yri~k~IGa~~a~Lg-gvDaiVFTgGIGEns~~vR~~i~~~l 347 (408)
T 1g99_A 298 AELALEIFAYKVKKFIGEYSAVLN-GADAVVFTAGIGENSASIRKRILTGL 347 (408)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT-SCSEEEEEHHHHHHCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhC-CCCEEEECccccccCHHHHHHHHhhh
Confidence 344788888888877765432 3 589999999999 8888887766543
No 169
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=32.64 E-value=32 Score=35.83 Aligned_cols=58 Identities=10% Similarity=0.166 Sum_probs=38.2
Q ss_pred cEEEEEEccCCceEEEEEcCCCCEEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhh
Q 008692 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSK 84 (557)
Q Consensus 10 ~~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~ 84 (557)
-.+|+||+|.|+.|+++++..|. +...+..|++ |.. ..+... +++++.+.+++.+..+
T Consensus 59 G~~LAlDlGGTn~RV~~V~l~g~-~~~~~~~~~i--p~~-----~~~g~~---------~~LFd~Ia~~i~~fl~ 116 (445)
T 3hm8_A 59 GDFLALDLGGTNFRVLLVRVTTG-VQITSEIYSI--PET-----VAQGSG---------QQLFDHIVDCIVDFQQ 116 (445)
T ss_dssp EEEEEEEESSSSEEEEEEEESSS-EEEEEEEECC--CHH-----HHTSBH---------HHHHHHHHHHHHHHHH
T ss_pred eEEEEEEecCCeEEEEEEEECCc-eEEEEEEecc--Ccc-----ccCCCH---------HHHHHHHHHHHHHHHH
Confidence 37899999999999999999877 3333334432 221 111111 2788888888877654
No 170
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=31.93 E-value=13 Score=39.78 Aligned_cols=33 Identities=18% Similarity=0.189 Sum_probs=25.4
Q ss_pred CcEEEEEEccCCceEEEEEcCC-C--CEEEEEeeec
Q 008692 9 DSLFLGFDSSTQSLKATVLDSN-L--NIVASEQLQF 41 (557)
Q Consensus 9 ~~~~lgIDiGTts~Ka~l~d~~-G--~~v~~~~~~~ 41 (557)
++|+.|||||||++.+++-+.+ | +.+.+...+.
T Consensus 1 m~~i~GiDIGnsttev~l~~~~~g~i~~l~~g~~~t 36 (607)
T 1nbw_A 1 MPLIAGIDIGNATTEVALASDYPQARAFVASGIVAT 36 (607)
T ss_dssp -CEEEEEEECSSEEEEEEEECBTTBCCCCEEEEEEC
T ss_pred CcEEEEEEecCceEEEEEEEEcCCeEEEEEeecccC
Confidence 3689999999999999987644 5 4577776664
No 171
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=31.70 E-value=33 Score=27.61 Aligned_cols=22 Identities=9% Similarity=0.137 Sum_probs=19.9
Q ss_pred EEEEEccCCceEEEEEcCCCCE
Q 008692 12 FLGFDSSTQSLKATVLDSNLNI 33 (557)
Q Consensus 12 ~lgIDiGTts~Ka~l~d~~G~~ 33 (557)
+||||.|+..+=.++-|..|.+
T Consensus 3 iLglD~G~kriGvAvsd~~~~~ 24 (98)
T 1iv0_A 3 VGALDVGEARIGLAVGEEGVPL 24 (98)
T ss_dssp EEEEEESSSEEEEEEECSCCSS
T ss_pred EEEEEeCCCEEEEEEEeCCCCe
Confidence 7999999999999999998754
No 172
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=30.79 E-value=18 Score=36.11 Aligned_cols=31 Identities=29% Similarity=0.374 Sum_probs=22.0
Q ss_pred EEEEEEccCCceEEEEEcCCCCEEEEEeeecc
Q 008692 11 LFLGFDSSTQSLKATVLDSNLNIVASEQLQFD 42 (557)
Q Consensus 11 ~~lgIDiGTts~Ka~l~d~~G~~v~~~~~~~~ 42 (557)
++||+|||.-++|+++++.+|++ ...+.+.|
T Consensus 1 ~iiG~DIGGAn~K~a~~~~~g~~-~~~~~~~P 31 (334)
T 3cet_A 1 MILGIDIGGANTKITELHENGEF-KVHHLYFP 31 (334)
T ss_dssp CEEEEEEC--CEEEEEECSTTCC-EEEEC---
T ss_pred CeeEEEecccceeeeeecCCCce-EEEEEecC
Confidence 37999999999999999999988 55555544
No 173
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=29.82 E-value=27 Score=34.81 Aligned_cols=22 Identities=14% Similarity=0.160 Sum_probs=17.6
Q ss_pred EEEEEEccCCceEEEEEcCCCCEE
Q 008692 11 LFLGFDSSTQSLKATVLDSNLNIV 34 (557)
Q Consensus 11 ~~lgIDiGTts~Ka~l~d~~G~~v 34 (557)
+.+|||+||+++|+.. .+|.++
T Consensus 22 ~~igiDlG~~~tkv~~--~~g~~~ 43 (346)
T 2fsj_A 22 VVVGLDVGYGDTKVIG--VDGKRI 43 (346)
T ss_dssp EEEEEEECSSEEEEEC--GGGCEE
T ss_pred EEEEEecCCcceeEEe--cCCCEE
Confidence 6799999999999884 456654
No 174
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=25.13 E-value=40 Score=35.16 Aligned_cols=21 Identities=5% Similarity=0.001 Sum_probs=18.7
Q ss_pred cEEEEEEccCCceEEEEEcCC
Q 008692 10 SLFLGFDSSTQSLKATVLDSN 30 (557)
Q Consensus 10 ~~~lgIDiGTts~Ka~l~d~~ 30 (557)
+|.+.||+|+|++|..||.-+
T Consensus 34 ~y~iviDaGSsgtRl~VY~~~ 54 (452)
T 3zx3_A 34 KYGIVLDAGSSHTNLYIYKWP 54 (452)
T ss_dssp EEEEEEEECSSCEEEEEEEEE
T ss_pred eEEEEEEcCCCCcEEEEEEEe
Confidence 588999999999999999853
No 175
>1dw0_A Cytochrome C; asparagine ligation, oxygen binding, disulfide bridge, oxygen storage/transport complex; HET: HEM; 1.82A {Rhodobacter sphaeroides} SCOP: a.3.1.1 PDB: 1dw1_A* 1dw2_A* 1dw3_A*
Probab=24.91 E-value=16 Score=30.32 Aligned_cols=29 Identities=14% Similarity=-0.019 Sum_probs=24.5
Q ss_pred HHHhhhCChhhhcccceeechhhHHHHHh
Q 008692 179 RKLFQTQPGVYDDTERISVVSSFMASLLI 207 (557)
Q Consensus 179 ~Wl~~~~pe~~~~~~~~l~~~dyl~~~LT 207 (557)
.|+++|..+++.|...-..=.|||.|.+|
T Consensus 83 kwf~rnc~~v~gr~cta~EK~d~l~~l~~ 111 (112)
T 1dw0_A 83 KWLGRNCNSVIGRDCTPGEKADLLAWLAA 111 (112)
T ss_dssp HHHHHHHHHHHSSCCCHHHHHHHHHHHHT
T ss_pred HHHHhhhhHHHcccCCHHHHHHHHHHHHh
Confidence 49999999999887766667899999886
No 176
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=24.03 E-value=76 Score=27.21 Aligned_cols=23 Identities=22% Similarity=0.252 Sum_probs=20.7
Q ss_pred EEEEEEccCCceEEEEEcCCCCE
Q 008692 11 LFLGFDSSTQSLKATVLDSNLNI 33 (557)
Q Consensus 11 ~~lgIDiGTts~Ka~l~d~~G~~ 33 (557)
-+||||.|+..|=.++-|..|..
T Consensus 4 ~iLglD~G~kriGvAvsd~~~~~ 26 (138)
T 1nu0_A 4 TLMAFDFGTKSIGVAVGQRITGT 26 (138)
T ss_dssp EEEEEECCSSEEEEEEEETTTTE
T ss_pred eEEEEEeCCCEEEEEEEcCCCCE
Confidence 48999999999999999998764
No 177
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=23.39 E-value=45 Score=34.93 Aligned_cols=58 Identities=10% Similarity=0.208 Sum_probs=37.3
Q ss_pred EEEEEEccCCceEEEEEcCCCC-----EEEEEeeeccCCCCCCCCCCceeeCCCCCCCccCChhHHHHHHHHHHHHHhh
Q 008692 11 LFLGFDSSTQSLKATVLDSNLN-----IVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSK 84 (557)
Q Consensus 11 ~~lgIDiGTts~Ka~l~d~~G~-----~v~~~~~~~~~~~p~~g~~~~~eqd~~~~~~~~~~~~~~~~a~~~~~~~l~~ 84 (557)
.+|+||+|.|+.|+++++..|. .+...+..|++ |.. .-+... +++++-+.+++.++.+
T Consensus 78 ~fLAlDlGGTNfRV~~V~L~g~~~~~~~~~~~~~~~~I--p~~-----l~~gt~---------~eLFd~IA~~i~~fl~ 140 (470)
T 3f9m_A 78 DFLSLDLGGTNFRVMLVKVGEGEEGQWSVKTKHQMYSI--PED-----AMTGTA---------EMLFDYISECISDFLD 140 (470)
T ss_dssp EEEEEEESSSEEEEEEEEEEC----CEEEEEEEEEEEC--CHH-----HHSSBH---------HHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCceEEEEEEEECCCCCCcceEEEEEEeecC--ChH-----hccCCH---------HHHHHHHHHHHHHHHh
Confidence 7899999999999999997654 34444444442 321 111111 2788888888887654
No 178
>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2
Probab=23.00 E-value=82 Score=27.24 Aligned_cols=32 Identities=6% Similarity=0.125 Sum_probs=27.4
Q ss_pred hHHHHHHHHHHHHHhhc--CCCCCeeEEEEeccc
Q 008692 69 LMWIEALDLMLQKLSKS--LDLSKVTAVSGSGQQ 100 (557)
Q Consensus 69 ~~~~~a~~~~~~~l~~~--~~~~~I~aIgis~~~ 100 (557)
+++++++.++++++.+. +.+++|..|-||...
T Consensus 47 e~I~~At~ELl~eii~~N~l~~eDIvSv~FTvT~ 80 (148)
T 1xho_A 47 DEIVAETQKLLKEMAEKNGLEEDDIISIIFTVTK 80 (148)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEECT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeCC
Confidence 49999999999998775 788999999998763
No 179
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=21.16 E-value=52 Score=30.05 Aligned_cols=59 Identities=12% Similarity=0.177 Sum_probs=37.4
Q ss_pred HHHHHcCCchhhhcCCcccCCccccccCHHHHHHcCCCCCCeEEEcCC----hhhhhhhccCCCCCCcEEEEecccce
Q 008692 234 IVLEATAPSLEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSG----DNPNSLAGLTLSTSGDLAISLGTSDT 307 (557)
Q Consensus 234 ~ll~~~g~~~~~~LP~i~~~~~~~G~l~~~~a~~~GL~~g~pV~~G~~----D~~aa~~g~g~~~~g~~~~~~GTs~~ 307 (557)
+.++...||..+.||-+.+ +++..+.+ .+ ++||++|+. +....++.+|+ ..+|+|+...
T Consensus 121 ~~i~~~~PD~iEiLPGi~p--~iI~~i~~----~~----~~PiIaGGlI~~~edv~~al~aGA-----~aVsTs~~~L 183 (192)
T 3kts_A 121 ALIQKVQPDCIELLPGIIP--EQVQKMTQ----KL----HIPVIAGGLIETSEQVNQVIASGA-----IAVTTSNKHL 183 (192)
T ss_dssp HHHHHHCCSEEEEECTTCH--HHHHHHHH----HH----CCCEEEESSCCSHHHHHHHHTTTE-----EEEEECCGGG
T ss_pred HHHhhcCCCEEEECCchhH--HHHHHHHH----hc----CCCEEEECCcCCHHHHHHHHHcCC-----eEEEeCCHHH
Confidence 4556666665688888765 45555443 33 789999774 44555565554 5778887543
No 180
>1dbf_A Protein (chorismate mutase); shikimate pathway, isomerase; 1.30A {Bacillus subtilis} SCOP: d.79.1.2 PDB: 1com_A 2chs_A 2cht_A* 1fnj_A 1fnk_A
Probab=20.96 E-value=96 Score=26.19 Aligned_cols=32 Identities=13% Similarity=0.082 Sum_probs=27.4
Q ss_pred hHHHHHHHHHHHHHhhc--CCCCCeeEEEEeccc
Q 008692 69 LMWIEALDLMLQKLSKS--LDLSKVTAVSGSGQQ 100 (557)
Q Consensus 69 ~~~~~a~~~~~~~l~~~--~~~~~I~aIgis~~~ 100 (557)
+++++++.++++++.+. ..+++|..|-||...
T Consensus 18 e~I~~at~eLl~~i~~~N~l~~~dIvSv~FT~T~ 51 (127)
T 1dbf_A 18 EEILQKTKQLLEKIIEENHTKPEDVVQMLLSATP 51 (127)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGGEEEEEEEECT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeCC
Confidence 49999999999998775 788999999998763
Done!