Query 008694
Match_columns 557
No_of_seqs 183 out of 1851
Neff 9.1
Searched_HMMs 46136
Date Thu Mar 28 15:24:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008694.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008694hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0202 Ca2+ transporting ATPa 100.0 3.8E-89 8.1E-94 708.6 38.1 536 1-556 1-541 (972)
2 TIGR01523 ATPase-IID_K-Na pota 100.0 2.3E-78 5E-83 687.1 55.0 524 3-556 6-602 (1053)
3 COG0474 MgtA Cation transport 100.0 8.1E-76 1.8E-80 660.3 49.5 486 3-556 22-511 (917)
4 TIGR01106 ATPase-IIC_X-K sodiu 100.0 1.3E-74 2.9E-79 658.3 53.0 499 3-556 16-525 (997)
5 TIGR01522 ATPase-IIA2_Ca golgi 100.0 6.7E-74 1.5E-78 647.1 55.3 498 2-556 2-504 (884)
6 KOG0204 Calcium transporting A 100.0 2E-75 4.4E-80 605.6 33.9 489 8-556 102-607 (1034)
7 PRK10517 magnesium-transportin 100.0 4.5E-71 9.8E-76 620.0 52.4 463 1-556 46-515 (902)
8 TIGR01517 ATPase-IIB_Ca plasma 100.0 5.5E-71 1.2E-75 627.1 51.8 487 8-556 43-544 (941)
9 TIGR01116 ATPase-IIA1_Ca sarco 100.0 6.5E-71 1.4E-75 624.2 50.4 492 53-556 1-495 (917)
10 TIGR01524 ATPase-IIIB_Mg magne 100.0 1.9E-70 4.1E-75 615.4 51.0 462 1-556 12-480 (867)
11 PRK15122 magnesium-transportin 100.0 9.2E-70 2E-74 610.4 53.3 471 1-556 24-513 (903)
12 PLN03190 aminophospholipid tra 100.0 1.9E-67 4.1E-72 599.5 44.5 494 34-556 85-669 (1178)
13 TIGR01657 P-ATPase-V P-type AT 100.0 6.3E-66 1.4E-70 590.9 46.7 464 21-556 137-616 (1054)
14 TIGR01652 ATPase-Plipid phosph 100.0 3.7E-66 7.9E-71 594.6 40.7 493 36-556 1-574 (1057)
15 TIGR01647 ATPase-IIIA_H plasma 100.0 6.3E-65 1.4E-69 564.0 48.3 416 23-556 1-418 (755)
16 KOG0203 Na+/K+ ATPase, alpha s 100.0 3.5E-63 7.5E-68 514.0 25.9 497 3-554 38-545 (1019)
17 KOG0206 P-type ATPase [General 100.0 2.6E-59 5.6E-64 515.5 30.1 487 32-555 28-593 (1151)
18 KOG0210 P-type ATPase [Inorgan 100.0 2.7E-59 5.9E-64 473.8 23.1 454 31-523 74-583 (1051)
19 KOG0208 Cation transport ATPas 100.0 5.1E-55 1.1E-59 459.9 35.0 480 21-555 158-664 (1140)
20 KOG0205 Plasma membrane H+-tra 100.0 4.2E-55 9.2E-60 441.3 24.0 440 4-557 18-461 (942)
21 PRK01122 potassium-transportin 100.0 1.2E-50 2.7E-55 436.2 42.1 390 54-555 28-425 (679)
22 PRK14010 potassium-transportin 100.0 1.1E-49 2.5E-54 428.3 41.5 365 55-523 28-400 (673)
23 TIGR01497 kdpB K+-transporting 100.0 2.9E-49 6.3E-54 424.5 42.8 391 54-555 27-426 (675)
24 TIGR01494 ATPase_P-type ATPase 100.0 1.7E-45 3.6E-50 394.5 35.3 307 96-523 5-314 (499)
25 TIGR01525 ATPase-IB_hvy heavy 100.0 2.9E-44 6.2E-49 388.6 35.1 253 86-365 17-270 (556)
26 TIGR01511 ATPase-IB1_Cu copper 100.0 5.1E-43 1.1E-47 377.7 43.8 247 86-364 53-300 (562)
27 PRK11033 zntA zinc/cadmium/mer 100.0 7.1E-43 1.5E-47 386.6 43.3 255 86-364 205-459 (741)
28 KOG0209 P-type ATPase [Inorgan 100.0 7.9E-45 1.7E-49 375.2 19.6 431 22-525 161-619 (1160)
29 TIGR01512 ATPase-IB2_Cd heavy 100.0 2.9E-43 6.3E-48 378.4 31.2 252 86-363 17-268 (536)
30 PRK10671 copA copper exporting 100.0 6.3E-41 1.4E-45 378.3 43.8 256 86-364 285-540 (834)
31 COG2217 ZntA Cation transport 100.0 1.6E-41 3.5E-46 365.5 32.5 258 85-366 172-430 (713)
32 KOG0207 Cation transport ATPas 100.0 4.3E-38 9.3E-43 332.4 17.7 269 83-367 337-608 (951)
33 PF00122 E1-E2_ATPase: E1-E2 A 100.0 3.6E-36 7.9E-41 290.7 26.3 228 93-337 2-230 (230)
34 COG2216 KdpB High-affinity K+ 100.0 1.9E-29 4E-34 250.6 24.5 367 59-523 32-406 (681)
35 PF13246 Hydrolase_like2: Puta 99.8 2.1E-19 4.5E-24 145.6 8.0 91 415-524 1-91 (91)
36 PF00690 Cation_ATPase_N: Cati 99.5 7E-14 1.5E-18 107.2 7.5 69 4-72 1-69 (69)
37 smart00831 Cation_ATPase_N Cat 99.2 5.6E-11 1.2E-15 89.7 7.3 62 15-76 2-63 (64)
38 KOG4383 Uncharacterized conser 97.5 0.0019 4E-08 68.2 14.2 38 127-164 159-196 (1354)
39 PF00702 Hydrolase: haloacid d 96.6 0.00075 1.6E-08 63.8 1.3 19 341-359 1-19 (215)
40 TIGR01652 ATPase-Plipid phosph 94.4 1.4 3E-05 52.3 17.2 201 53-272 17-265 (1057)
41 PLN03190 aminophospholipid tra 91.6 0.46 1E-05 56.4 7.7 200 53-271 103-346 (1178)
42 KOG0206 P-type ATPase [General 86.4 1.4 3E-05 51.4 6.4 69 87-155 84-160 (1151)
43 TIGR01657 P-ATPase-V P-type AT 81.7 83 0.0018 37.6 18.7 23 130-152 248-272 (1054)
44 TIGR01116 ATPase-IIA1_Ca sarco 71.8 1.9E+02 0.0041 34.0 17.8 63 91-153 43-115 (917)
45 TIGR01517 ATPase-IIB_Ca plasma 66.6 1.4E+02 0.003 35.2 15.3 23 130-152 185-207 (941)
46 COG0474 MgtA Cation transport 62.6 2.2E+02 0.0048 33.4 15.8 130 5-154 43-183 (917)
47 PF12368 DUF3650: Protein of u 52.7 12 0.00026 22.6 1.8 15 21-35 13-27 (28)
48 PF00122 E1-E2_ATPase: E1-E2 A 52.6 2E+02 0.0044 26.9 12.9 197 103-321 9-210 (230)
49 PRK11507 ribosome-associated p 51.0 21 0.00046 27.0 3.3 26 127-152 38-63 (70)
50 TIGR01106 ATPase-IIC_X-K sodiu 48.1 5.5E+02 0.012 30.6 17.5 65 89-153 109-183 (997)
51 PF13275 S4_2: S4 domain; PDB: 47.0 11 0.00024 28.1 1.2 25 127-151 34-58 (65)
52 TIGR01647 ATPase-IIIA_H plasma 46.6 5E+02 0.011 29.7 15.4 59 94-152 65-133 (755)
53 TIGR01522 ATPase-IIA2_Ca golgi 45.2 5.2E+02 0.011 30.3 15.2 57 97-153 93-159 (884)
54 PF03120 DNA_ligase_OB: NAD-de 45.1 12 0.00026 29.3 1.2 23 136-158 44-67 (82)
55 TIGR01524 ATPase-IIIB_Mg magne 42.9 6.1E+02 0.013 29.6 16.9 57 95-152 100-172 (867)
56 PF12710 HAD: haloacid dehalog 42.1 13 0.00028 33.9 1.2 14 344-357 1-14 (192)
57 PF15584 Imm44: Immunity prote 38.5 16 0.00035 29.0 1.1 19 144-162 13-31 (94)
58 COG1188 Ribosome-associated he 37.5 37 0.00079 27.6 2.9 36 126-163 34-69 (100)
59 PF01455 HupF_HypC: HupF/HypC 36.8 91 0.002 23.4 4.9 31 124-154 17-50 (68)
60 PF12148 DUF3590: Protein of u 31.9 21 0.00046 28.1 0.8 24 134-157 58-81 (85)
61 smart00306 HintN Hint (Hedgeho 29.9 62 0.0013 25.7 3.3 26 126-151 74-99 (100)
62 PF06645 SPC12: Microsomal sig 29.4 2.4E+02 0.0053 21.7 6.3 23 247-269 6-28 (76)
63 PF03453 MoeA_N: MoeA N-termin 27.4 72 0.0016 28.6 3.6 60 139-216 81-142 (162)
64 PRK10517 magnesium-transportin 27.3 1.1E+03 0.023 27.8 18.0 55 98-152 136-206 (902)
65 PF09926 DUF2158: Uncharacteri 25.9 46 0.001 23.7 1.6 13 143-155 2-14 (53)
66 KOG0208 Cation transport ATPas 25.9 1.1E+03 0.025 27.7 14.0 58 96-164 220-277 (1140)
67 KOG3416 Predicted nucleic acid 25.0 45 0.00096 28.3 1.5 16 140-155 60-75 (134)
68 PF12791 RsgI_N: Anti-sigma fa 24.2 1.5E+02 0.0032 21.0 4.0 35 124-158 6-42 (56)
69 PRK03187 tgl transglutaminase; 24.2 1.5E+02 0.0032 28.8 5.0 28 130-157 154-181 (272)
70 PF13748 ABC_membrane_3: ABC t 24.0 6.3E+02 0.014 24.2 9.1 37 96-132 147-183 (237)
71 PRK05886 yajC preprotein trans 23.5 2.1E+02 0.0046 23.8 5.2 15 120-134 38-52 (109)
72 PRK10053 hypothetical protein; 22.7 40 0.00087 29.0 0.9 35 319-353 55-89 (130)
73 COG2501 S4-like RNA binding pr 22.7 1.1E+02 0.0023 23.4 3.1 26 127-152 38-63 (73)
74 KOG1419 Voltage-gated K+ chann 22.7 2E+02 0.0044 31.0 6.1 24 284-307 294-317 (654)
75 PRK04980 hypothetical protein; 20.7 1.2E+02 0.0026 24.9 3.2 37 123-164 18-56 (102)
76 TIGR00156 conserved hypothetic 20.6 49 0.0011 28.3 1.0 35 319-353 51-85 (126)
No 1
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.8e-89 Score=708.59 Aligned_cols=536 Identities=54% Similarity=0.790 Sum_probs=477.5
Q ss_pred ChhhhcCCHHHHHHhhCCCCCCCCCHHHHHHHHhhcCCCCCCCcccchHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcC
Q 008694 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALING 80 (557)
Q Consensus 1 ~~~~~~~~~~~~~~~l~~~~~~GL~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 80 (557)
|+++|+.+++|++..|.+++++||+.+|+.+|++.||.|+++.....++|+++++||.+++..++++++++||++.+
T Consensus 1 t~~~~~~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~~--- 77 (972)
T KOG0202|consen 1 TEEAHAKSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLAD--- 77 (972)
T ss_pred CcchhcCcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHh---
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999974
Q ss_pred CccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeCCeEEEeeCCCcCCCcEEEEcCCCccccce
Q 008694 81 ETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADM 160 (557)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDIv~l~~g~~vPaD~ 160 (557)
|.+++.|.++++++..++++||+++.+.++.|+++.|..++|+|+|+.+.+++++|||||||.++-||+||||.
T Consensus 78 ------~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADl 151 (972)
T KOG0202|consen 78 ------FDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADL 151 (972)
T ss_pred ------cccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccce
Confidence 34677778888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeecCCeeEEecccccCCcceeeccccccc-ccccccCCCCceEEeeceEeeceEEEEEEEecccchhHHHHHHhccc
Q 008694 161 RMIEMLSNQLRVDQAILTGESCSVEKELDSII-ATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQT 239 (557)
Q Consensus 161 ill~~~~g~~~vdes~ltGes~~~~k~~~~~~-~~~~~~~~~~n~l~~Gs~v~~g~~~~~V~~tG~~T~~~~~~~~~~~~ 239 (557)
++++. -++.||||.||||+.|+.|.....+ +++....++.|++|+||.|..|.++|+|+.||.+|.+|++.+.+...
T Consensus 152 Rl~e~--~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~ 229 (972)
T KOG0202|consen 152 RLIEA--KSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQAT 229 (972)
T ss_pred eEEee--eeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhcc
Confidence 99994 5599999999999999999888877 77888899999999999999999999999999999999999999998
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCc-chhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 008694 240 EDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGG-FLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALG 318 (557)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~l~~~iP~~l~~~~~~~~~~~ 318 (557)
...++|++++++.+...+..++.++|+.+|+++..++.++.+++ |++....+|..++++.++++|+|||+.+++++++|
T Consensus 230 e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG 309 (972)
T KOG0202|consen 230 ESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALG 309 (972)
T ss_pred CCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHh
Confidence 88899999999999999998889999999999888887766665 67889999999999999999999999999999999
Q ss_pred HHHHHhcCceeecchhhhhcccccEEEecCCCccCCCccEEEEEEEecccccCcceeeeeeeccccCCCCccccCCCccc
Q 008694 319 TKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQL 398 (557)
Q Consensus 319 ~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (557)
.+||+|+++++|...+.|+||.+++||+|||||||+|+|++.++|+.+...... .+....+..|+|.+.+........
T Consensus 310 ~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~--~~f~~tg~ty~~~g~v~~~~~~~~ 387 (972)
T KOG0202|consen 310 TRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATV--DEFNPTGTTYSPEGEVFKDGLYEK 387 (972)
T ss_pred HHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccc--cccccCCceeCCCCceEecCcccc
Confidence 999999999999999999999999999999999999999999999999865443 455667788888877655443222
Q ss_pred cCCCChHHHHHHHHHhcccccceeeccCCCCcceecCChhHHHHHHHHHHcCCCCCCCCchhhhhhhhhhcccccccccc
Q 008694 399 EFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWE 478 (557)
Q Consensus 399 ~~~~~~~~~~~~~~~~~lC~~~~~~~~~~~~~~~~~~~p~E~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (557)
......+.+.+++++.++||++...+++. ..|...|.|+|.||..++.+.|+........ .+.+ ...+++-+.
T Consensus 388 ~~~~~~~~l~~l~~i~~lCNda~v~~~~~-~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~-----s~~~-~~~c~~~~~ 460 (972)
T KOG0202|consen 388 DKAGDNDLLQELAEICALCNDATVEYNDA-DCYEKVGEPTEGALIVLAEKMGLPGTRSTNL-----SNEE-ASACNRVYS 460 (972)
T ss_pred ccccccHHHHHHHHHHHhhhhhhhhcCch-hhHHhcCCchHHHHHHHHHHcCCCcchhhcc-----cccc-cccchhHHH
Confidence 23445567888899999999998887655 7788889999999999999999876541111 0111 234445556
Q ss_pred cccceeeeecCCccCceEEEEEeeCC---eEEEEEeCCcHHHHhhcccccccCCCeeecCCHHHHHHHHHHHHHHHhhhc
Q 008694 479 IEFKKVSILEFSRDRKMMSVLCSHKQ---MCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNRLDNSIL 555 (557)
Q Consensus 479 ~~~~il~~~~F~s~rk~mSVvv~~~~---~~~l~~KGa~e~il~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gl 555 (557)
..++..+++||+|+||+|||.+.++. ++.+|+|||+|.|+++|++++.+.++..+|||+..|+.|++...+|+++||
T Consensus 461 ~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gL 540 (972)
T KOG0202|consen 461 RLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGL 540 (972)
T ss_pred HhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccc
Confidence 77888899999999999999998654 489999999999999999998763446699999999999999999999998
Q ss_pred c
Q 008694 556 Y 556 (557)
Q Consensus 556 ~ 556 (557)
-
T Consensus 541 R 541 (972)
T KOG0202|consen 541 R 541 (972)
T ss_pred e
Confidence 3
No 2
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=2.3e-78 Score=687.12 Aligned_cols=524 Identities=27% Similarity=0.421 Sum_probs=416.7
Q ss_pred hhhcCCHHHHHHhhCCCCCCCCCHHHHHHHHhhcCCCCCCCcccchHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCc
Q 008694 3 DAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGET 82 (557)
Q Consensus 3 ~~~~~~~~~~~~~l~~~~~~GL~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 82 (557)
+||..+++++++.|+|++.+||+++|+++|+++||+|+++.++++++|+.++++|++++.++++++++++++++
T Consensus 6 ~~~~~~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~------ 79 (1053)
T TIGR01523 6 AYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH------ 79 (1053)
T ss_pred chhhCCHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh------
Confidence 68999999999999999989999999999999999999999899999999999999999999999999999875
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeCCeEEEeeCCCcCCCcEEEEcCCCccccceEE
Q 008694 83 GLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRM 162 (557)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDIv~l~~g~~vPaD~il 162 (557)
.|..+++++++++++..+++++++++++.++.+++..+.+++|+|||++++|+++||||||||.+++||+||||++|
T Consensus 80 ---~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rL 156 (1053)
T TIGR01523 80 ---DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRL 156 (1053)
T ss_pred ---hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEE
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCeeEEecccccCCcceeeccccccc--ccccccCCCCceEEeeceEeeceEEEEEEEecccchhHHHHHHhcccC
Q 008694 163 IEMLSNQLRVDQAILTGESCSVEKELDSII--ATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTE 240 (557)
Q Consensus 163 l~~~~g~~~vdes~ltGes~~~~k~~~~~~--~~~~~~~~~~n~l~~Gs~v~~g~~~~~V~~tG~~T~~~~~~~~~~~~~ 240 (557)
++ ++++.||||+|||||.|+.|.+.... ....+..++.|++|+||.|.+|++.++|++||.+|.+|++++.+....
T Consensus 157 i~--~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~ 234 (1053)
T TIGR01523 157 IE--TKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDG 234 (1053)
T ss_pred EE--eCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhh
Confidence 98 57899999999999999999876432 123345577899999999999999999999999999999998875422
Q ss_pred C-----------------------------------CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCcch
Q 008694 241 D-----------------------------------EVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFL 285 (557)
Q Consensus 241 ~-----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (557)
. .++|+++++++++.++..+.+++++++++....
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~----------- 303 (1053)
T TIGR01523 235 GLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF----------- 303 (1053)
T ss_pred hccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----------
Confidence 1 148999999999999888888777777654321
Q ss_pred hhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCceeecchhhhhcccccEEEecCCCccCCCccEEEEEEEe
Q 008694 286 RGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVV 365 (557)
Q Consensus 286 ~~~~~~~~~~i~~l~~~iP~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 365 (557)
......+.++++++++++|++||+++++++.+++++|+++++++|+++++|+||.+++||+|||||||+|+|+|+++|..
T Consensus 304 ~~~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~ 383 (1053)
T TIGR01523 304 DVDKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIP 383 (1053)
T ss_pred hhhHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEc
Confidence 01124456788999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred cc-cccCcceeeeeeeccccCCC-Cc---------------------cccCC-CccccC--CC--ChHHHHHHHHHhccc
Q 008694 366 HS-VQQGPIIAEYGVTGTTYAPE-GV---------------------VFDSS-GIQLEF--PA--QLPCLLHIARCSALC 417 (557)
Q Consensus 366 ~~-~~~~~~~~~~~~~~~~~~~~-~~---------------------~~~~~-~~~~~~--~~--~~~~~~~~~~~~~lC 417 (557)
+. .+.- .-.+..|.|. +. ..... ...... .. ..+.+.+++.+.++|
T Consensus 384 ~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lc 457 (1053)
T TIGR01523 384 RFGTISI------DNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALA 457 (1053)
T ss_pred CCceEEe------cCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhc
Confidence 42 1100 0000011111 00 00000 000000 00 112355678888999
Q ss_pred ccceeeccCCCCcceecCChhHHHHHHHHHHcCCCCCC-CCchhhhhhhhhhc-----ccccccccccccceeeeecCCc
Q 008694 418 NESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFD-SMPSALNMLSKHER-----ASYCNHHWEIEFKKVSILEFSR 491 (557)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~p~E~all~~a~~~g~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~il~~~~F~s 491 (557)
|++.+..+.+...+...|||+|.||+.+|.+.|+.... +..... ...... ...........|++++++||||
T Consensus 458 n~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds 535 (1053)
T TIGR01523 458 NIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDL--LKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDS 535 (1053)
T ss_pred cCCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhh--hhhccccccccccccccccccccceEEEeccCC
Confidence 99876533223334556999999999999998874210 000000 000000 0000000134689999999999
Q ss_pred cCceEEEEEeeCC--eEEEEEeCCcHHHHhhcccccccCCCeeecCCHHHHHHHHHHHHHHHhhhcc
Q 008694 492 DRKMMSVLCSHKQ--MCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNRLDNSILY 556 (557)
Q Consensus 492 ~rk~mSVvv~~~~--~~~l~~KGa~e~il~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gl~ 556 (557)
+||||||++++++ .+++|+|||||.|+++|+++..+++++..+++++.|+++.+.+++|+++||.
T Consensus 536 ~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlR 602 (1053)
T TIGR01523 536 EIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLR 602 (1053)
T ss_pred CCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCe
Confidence 9999999999753 5889999999999999998764323367899999999999999999999985
No 3
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.1e-76 Score=660.32 Aligned_cols=486 Identities=41% Similarity=0.603 Sum_probs=420.4
Q ss_pred hhhcCCHH--HHHHhhCCCCCCCCCHHHHHHHHhhcCCCCCCCcccchHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcC
Q 008694 3 DAYARSVV--EVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALING 80 (557)
Q Consensus 3 ~~~~~~~~--~~~~~l~~~~~~GL~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 80 (557)
.||..+.+ ++...+.+++.+||+++|+.+|++.||.|+++..+..++|..++.+|++++..++++++.+++++..+..
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~ 101 (917)
T COG0474 22 TWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWVD 101 (917)
T ss_pred cccccccchhhHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 46777888 9999999999999999999999999999999998999999999999999999999999999998874421
Q ss_pred CccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeCCeEEEeeCCCcCCCcEEEEcCCCccccce
Q 008694 81 ETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADM 160 (557)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDIv~l~~g~~vPaD~ 160 (557)
.. .....++.+++++..++.++++++++.++++++..+.++.|+|||++++|++++|||||||++++||+||||+
T Consensus 102 ~~-----~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~ 176 (917)
T COG0474 102 AG-----VDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADL 176 (917)
T ss_pred cC-----cceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccce
Confidence 10 3444566677778889999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeecCCeeEEecccccCCcceeecccccccccccccC-CCCceEEeeceEeeceEEEEEEEecccchhHHHHHHhccc
Q 008694 161 RMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQ-DKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQT 239 (557)
Q Consensus 161 ill~~~~g~~~vdes~ltGes~~~~k~~~~~~~~~~~~~-~~~n~l~~Gs~v~~g~~~~~V~~tG~~T~~~~~~~~~~~~ 239 (557)
+|+++ .+++||||+|||||.|+.|.+......+.+.. ++.|++|+||.+++|++.|+|++||.+|..|++++.+...
T Consensus 177 rLl~~--~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~ 254 (917)
T COG0474 177 RLLES--SDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTK 254 (917)
T ss_pred EEEEe--cCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccc
Confidence 99984 33799999999999999999886655555565 8899999999999999999999999999999999998887
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 008694 240 EDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGT 319 (557)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~iP~~l~~~~~~~~~~~~ 319 (557)
....+++++.++++..++..+.+++++++++........ .+...+.++++++++++|++||+.+++++.+++
T Consensus 255 ~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~--------~~~~~~~~~v~l~va~IPegLp~~vti~la~g~ 326 (917)
T COG0474 255 KEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGN--------GLLESFLTALALAVAAVPEGLPAVVTIALALGA 326 (917)
T ss_pred cccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc--------cHHHHHHHHHHHHHhccccchHHHHHHHHHHHH
Confidence 678899999999999999999998888888876332111 145678899999999999999999999999999
Q ss_pred HHHHhcCceeecchhhhhcccccEEEecCCCccCCCccEEEEEEEecccccCcceeeeeeeccccCCCCccccCCCcccc
Q 008694 320 KRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLE 399 (557)
Q Consensus 320 ~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (557)
.+|+++++++|+++++|+||++++||||||||||+|+|+|++++..++. ...++ .
T Consensus 327 ~~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~-------------~~~~~------------~ 381 (917)
T COG0474 327 QRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGG-------------KDIDD------------K 381 (917)
T ss_pred HHHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCc-------------ccccc------------c
Confidence 9999999999999999999999999999999999999999999987510 00000 0
Q ss_pred CCCChHHHHHHHHHhcccccceeeccCCCCcceecCChhHHHHHHHHHHcCCCCCCCCchhhhhhhhhhccccccccccc
Q 008694 400 FPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEI 479 (557)
Q Consensus 400 ~~~~~~~~~~~~~~~~lC~~~~~~~~~~~~~~~~~~~p~E~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (557)
.......+.+++.++++||++.+..+ + ++..|||+|.|+++++.+.|+.. .. ..++.
T Consensus 382 ~~~~~~~~~~~l~~~~lc~~~~~~~~-~---~~~~gdptE~Al~~~a~~~~~~~---~~----------------~~~~~ 438 (917)
T COG0474 382 DLKDSPALLRFLLAAALCNSVTPEKN-G---WYQAGDPTEGALVEFAEKLGFSL---DL----------------SGLEV 438 (917)
T ss_pred ccccchHHHHHHHHHHhcCccccccc-C---ceecCCccHHHHHHHHHhcCCcC---CH----------------HHHhh
Confidence 01112344567888999999887654 3 77789999999999999998754 11 11245
Q ss_pred ccceeeeecCCccCceEEEEEeeCC-eEEEEEeCCcHHHHhhcccccccCCCeeecCCHHHHHHHHHHHHHHHhhhcc
Q 008694 480 EFKKVSILEFSRDRKMMSVLCSHKQ-MCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNRLDNSILY 556 (557)
Q Consensus 480 ~~~il~~~~F~s~rk~mSVvv~~~~-~~~l~~KGa~e~il~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gl~ 556 (557)
.|++++.+||||.|||||||++.++ ++++|+|||||.|+++|++. |+..+++++.++.+++..++|+++||.
T Consensus 439 ~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~-----~~~~~~~~~~~~~~~~~~~~la~~glR 511 (917)
T COG0474 439 EYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSI-----GELEPLTEEGLRTLEEAVKELASEGLR 511 (917)
T ss_pred hcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhccc-----CcccccCHHHHHHHHHHHHHHHHHHHH
Confidence 6789999999999999999999554 69999999999999999976 677889999999999999999999985
No 4
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=1.3e-74 Score=658.29 Aligned_cols=499 Identities=29% Similarity=0.388 Sum_probs=414.9
Q ss_pred hhhcCCHHHHHHhhCCCCCCCCCHHHHHHHHhhcCCCCCCCcccchHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcC--
Q 008694 3 DAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALING-- 80 (557)
Q Consensus 3 ~~~~~~~~~~~~~l~~~~~~GL~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-- 80 (557)
+||..|+++++++|++++.+||+++|+++|+++||+|+++.++++++|+.++++|++++.+++++++++++++..+..
T Consensus 16 ~~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~ 95 (997)
T TIGR01106 16 DDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQAST 95 (997)
T ss_pred CchhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhcc
Confidence 579999999999999999999999999999999999999988999999999999999999999999999887654421
Q ss_pred --CccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeCCeEEEeeCCCcCCCcEEEEcCCCcccc
Q 008694 81 --ETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPA 158 (557)
Q Consensus 81 --~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDIv~l~~g~~vPa 158 (557)
......|+.+++++++++++..+..++++++++.++++.+..+.+++|+|||++++|+++||+|||+|.+++||+|||
T Consensus 96 ~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPa 175 (997)
T TIGR01106 96 EEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPA 175 (997)
T ss_pred CCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEee
Confidence 112246788888999999999999999999999999999998999999999999999999999999999999999999
Q ss_pred ceEEeeecCCeeEEecccccCCcceeecccccccccccccCCCCceEEeeceEeeceEEEEEEEecccchhHHHHHHhcc
Q 008694 159 DMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQ 238 (557)
Q Consensus 159 D~ill~~~~g~~~vdes~ltGes~~~~k~~~~~~~~~~~~~~~~n~l~~Gs~v~~g~~~~~V~~tG~~T~~~~~~~~~~~ 238 (557)
||++++ ++.+.||||+|||||.|+.|.++.. ...+.+..|++|+||.+.+|++.++|++||.+|.+|++.+.+..
T Consensus 176 D~~il~--~~~l~VdeS~LTGES~pv~K~~~~~---~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~ 250 (997)
T TIGR01106 176 DLRIIS--AQGCKVDNSSLTGESEPQTRSPEFT---HENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASG 250 (997)
T ss_pred eEEEEE--ccCcEEEccccCCCCCceeccCCCc---ccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhh
Confidence 999997 4468999999999999999987632 22334678999999999999999999999999999999988877
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 008694 239 TEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALG 318 (557)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~iP~~l~~~~~~~~~~~ 318 (557)
.+.+++|+++.++++..++..+++++++++++++.... ..+...+.++++++++++|++||+++++++..+
T Consensus 251 ~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~ 321 (997)
T TIGR01106 251 LENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILG---------YTWLEAVIFLIGIIVANVPEGLLATVTVCLTLT 321 (997)
T ss_pred cccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---------CCHHHHHHHHHHHHhhcCCccchHHHHHHHHHH
Confidence 77778999999999999988887777777665543211 123455677788899999999999999999999
Q ss_pred HHHHHhcCceeecchhhhhcccccEEEecCCCccCCCccEEEEEEEecccccCcceeeeeeeccccCCCCccccCCCccc
Q 008694 319 TKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQL 398 (557)
Q Consensus 319 ~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (557)
+.+|+++|+++|+++++|+||++++||||||||||+|+|+|.+++.++..+..+ +. +++.+.
T Consensus 322 ~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~--------~~-~~~~~~--------- 383 (997)
T TIGR01106 322 AKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEAD--------TT-EDQSGV--------- 383 (997)
T ss_pred HHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecC--------Cc-cCCCCc---------
Confidence 999999999999999999999999999999999999999999999866432110 00 011100
Q ss_pred cCCCChHHHHHHHHHhcccccceeeccCCC---CcceecCChhHHHHHHHHHHcCCCCCCCCchhhhhhhhhhccccccc
Q 008694 399 EFPAQLPCLLHIARCSALCNESVLQYNPDK---GNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNH 475 (557)
Q Consensus 399 ~~~~~~~~~~~~~~~~~lC~~~~~~~~~~~---~~~~~~~~p~E~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (557)
...........++.++++||++.+..+.+. ...+..|||+|.||++++...+... .
T Consensus 384 ~~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~---------------------~ 442 (997)
T TIGR01106 384 SFDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSV---------------------M 442 (997)
T ss_pred cCCcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCH---------------------H
Confidence 001111233456678899998876432111 1234569999999999998644210 0
Q ss_pred ccccccceeeeecCCccCceEEEEEeeC----CeEEEEEeCCcHHHHhhcccccccCCCeeecCCHHHHHHHHHHHHHHH
Q 008694 476 HWEIEFKKVSILEFSRDRKMMSVLCSHK----QMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNRLD 551 (557)
Q Consensus 476 ~~~~~~~il~~~~F~s~rk~mSVvv~~~----~~~~l~~KGa~e~il~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 551 (557)
..+..|++++++||||+||||+++++.+ +++++|+|||||.|+++|++++. +|+..+++++.++.+.+.+++|+
T Consensus 443 ~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~--~g~~~~l~~~~~~~~~~~~~~~a 520 (997)
T TIGR01106 443 EMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILI--HGKEQPLDEELKEAFQNAYLELG 520 (997)
T ss_pred HHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhc--CCCcccCCHHHHHHHHHHHHHHH
Confidence 1145688899999999999999988642 26889999999999999998874 78889999999999999999999
Q ss_pred hhhcc
Q 008694 552 NSILY 556 (557)
Q Consensus 552 ~~gl~ 556 (557)
++|+.
T Consensus 521 ~~GlR 525 (997)
T TIGR01106 521 GLGER 525 (997)
T ss_pred hcCCE
Confidence 99983
No 5
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=6.7e-74 Score=647.13 Aligned_cols=498 Identities=35% Similarity=0.521 Sum_probs=411.0
Q ss_pred hhhhcCCHHHHHHhhCCCCCCCCC-HHHHHHHHhhcCCCCCCCcccchHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHhc
Q 008694 2 EDAYARSVVEVLDFFGVDPTKGLT-DSQVARHVRIYGKNVLPQEKRTAFWKLVLKQF-DDLLVKILIAAAVISFFLALIN 79 (557)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~GL~-~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~ 79 (557)
++||.+|+++++++|++++.+||+ ++|+++|++.||+|+++.++++++|+.++++| ++++.++++++++++++++
T Consensus 2 ~~~~~~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g--- 78 (884)
T TIGR01522 2 KQYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG--- 78 (884)
T ss_pred cchhhCCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc---
Confidence 579999999999999999999999 89999999999999999988899999999999 8999999999999988775
Q ss_pred CCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeCCeEEEeeCCCcCCCcEEEEcCCCccccc
Q 008694 80 GETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPAD 159 (557)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDIv~l~~g~~vPaD 159 (557)
.|..++.++++++++..+++++++++++.++++.+..+.+++|+|||++++|+++||+|||||.+++||+||||
T Consensus 79 ------~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaD 152 (884)
T TIGR01522 79 ------NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPAD 152 (884)
T ss_pred ------chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeee
Confidence 46677777777888889999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEeeecCCeeEEecccccCCcceeeccccccccc-ccccCCCCceEEeeceEeeceEEEEEEEecccchhHHHHHHhcc
Q 008694 160 MRMIEMLSNQLRVDQAILTGESCSVEKELDSIIAT-NAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQ 238 (557)
Q Consensus 160 ~ill~~~~g~~~vdes~ltGes~~~~k~~~~~~~~-~~~~~~~~n~l~~Gs~v~~g~~~~~V~~tG~~T~~~~~~~~~~~ 238 (557)
|+|++ +.++.||||+|||||.|+.|.+++.... .....++.|++|+||.+.+|++.++|++||.+|..|++.+.+..
T Consensus 153 g~ii~--g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~ 230 (884)
T TIGR01522 153 LRIVE--AVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQA 230 (884)
T ss_pred EEEEE--cCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhcc
Confidence 99997 3469999999999999999998753221 23345678999999999999999999999999999999999888
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 008694 239 TEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALG 318 (557)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~iP~~l~~~~~~~~~~~ 318 (557)
....++|+++.+++++.++..+.++++++++++.+. .. ..+...+..++++++++||++||+++++++..+
T Consensus 231 ~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~ 301 (884)
T TIGR01522 231 IEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWF--QG-------KDWLEMFTISVSLAVAAIPEGLPIIVTVTLALG 301 (884)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hc-------CCHHHHHHHHHHHHHHHccchHHHHHHHHHHHH
Confidence 788889999999999998877665554444443321 11 124556778889999999999999999999999
Q ss_pred HHHHHhcCceeecchhhhhcccccEEEecCCCccCCCccEEEEEEEecccccCcceeeeeeeccccCCCCccccCCCccc
Q 008694 319 TKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQL 398 (557)
Q Consensus 319 ~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (557)
+.+|+++|+++|+.+++|.||++|+||||||||||+|+|++.+++..+..... .+...+++.+........ .
T Consensus 302 ~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~-------~~~~~~~~~~~~~~~~~~-~ 373 (884)
T TIGR01522 302 VLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTM-------LNAVSLNQFGEVIVDGDV-L 373 (884)
T ss_pred HHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEee-------ccCCccCCCCcccccccc-c
Confidence 99999999999999999999999999999999999999999999876542110 011111111111000000 0
Q ss_pred cCCCChHHHHHHHHHhcccccceeeccCCCCcceecCChhHHHHHHHHHHcCCCCCCCCchhhhhhhhhhcccccccccc
Q 008694 399 EFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWE 478 (557)
Q Consensus 399 ~~~~~~~~~~~~~~~~~lC~~~~~~~~~~~~~~~~~~~p~E~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (557)
.....+.+.+++.+.++||++......+ ...|+|+|.|+++++++.|+.. .+
T Consensus 374 -~~~~~~~~~~~l~~~~l~~~~~~~~~~~----~~~g~p~e~All~~~~~~~~~~-----------------------~~ 425 (884)
T TIGR01522 374 -HGFYTVAVSRILEAGNLCNNAKFRNEAD----TLLGNPTDVALIELLMKFGLDD-----------------------LR 425 (884)
T ss_pred -ccccCHHHHHHHHHHhhhCCCeecCCCC----CcCCChHHHHHHHHHHHcCcHh-----------------------HH
Confidence 0011234556777889999886532211 2348999999999998876521 02
Q ss_pred cccceeeeecCCccCceEEEEEee--CCeEEEEEeCCcHHHHhhcccccccCCCeeecCCHHHHHHHHHHHHHHHhhhcc
Q 008694 479 IEFKKVSILEFSRDRKMMSVLCSH--KQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNRLDNSILY 556 (557)
Q Consensus 479 ~~~~il~~~~F~s~rk~mSVvv~~--~~~~~l~~KGa~e~il~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gl~ 556 (557)
..|+.++++||+|.||||+++++. ++++++|+|||||.|++.|++++.+ +|...+++++.|+++.+.+++|+++|+.
T Consensus 426 ~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~-~g~~~~l~~~~~~~i~~~~~~~a~~G~r 504 (884)
T TIGR01522 426 ETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKK-DGKTLTLTQQQRDVIQEEAAEMASAGLR 504 (884)
T ss_pred hhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhc-CCCeeeCCHHHHHHHHHHHHHHHhcCCE
Confidence 357889999999999999999987 3478999999999999999988743 6888899999999999999999999974
No 6
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-75 Score=605.55 Aligned_cols=489 Identities=31% Similarity=0.437 Sum_probs=415.1
Q ss_pred CHHHHHHhhCCCCCCCCCH--HHHHHHHhhcCCCCCCCcccchHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCcccc
Q 008694 8 SVVEVLDFFGVDPTKGLTD--SQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGETGLT 85 (557)
Q Consensus 8 ~~~~~~~~l~~~~~~GL~~--~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 85 (557)
.+++|+++|+|||..||+. +|+++|++.||.|.+|+.++++||+++|++|++...+++.+++++|+.+++... ....
T Consensus 102 Gv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~-g~~~ 180 (1034)
T KOG0204|consen 102 GVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTP-GIED 180 (1034)
T ss_pred CHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccC-CCCc
Confidence 5899999999999999976 899999999999999999999999999999999999999999999999987753 2345
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEEeCCeEEEeeCCCcCCCcEEEEcCCCccccceEEee
Q 008694 86 AFLEPSVILLILAANAAVGVITETNAEKALEELRAYQ-ADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIE 164 (557)
Q Consensus 86 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~-~~~~~v~r~g~~~~i~~~~l~~GDIv~l~~g~~vPaD~ill~ 164 (557)
.|+++..|++.+++..++....+|+...++++|.+.. ..+..|+|||+.++|+..||+||||+.++.||.+||||++++
T Consensus 181 GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~ 260 (1034)
T KOG0204|consen 181 GWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQ 260 (1034)
T ss_pred ccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEe
Confidence 8999999999888888889999999999999998654 457899999999999999999999999999999999999998
Q ss_pred ecCCeeEEecccccCCcceeecccccccccccccCCCCceEEeeceEeeceEEEEEEEecccchhHHHHHHhcccCCCCC
Q 008694 165 MLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVT 244 (557)
Q Consensus 165 ~~~g~~~vdes~ltGes~~~~k~~~~~~~~~~~~~~~~n~l~~Gs~v~~g~~~~~V~~tG~~T~~~~~~~~~~~~~~~~~ 244 (557)
+.++.+|||++||||++++|.+.. +.++++||++.+|+++++|+.+|.+|..|+++..+......++
T Consensus 261 --gn~L~iDESSlTGESd~v~k~~~~-----------dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~t 327 (1034)
T KOG0204|consen 261 --GNSLKIDESSLTGESDHVQKSLDK-----------DPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEET 327 (1034)
T ss_pred --ccceeEecccccCCCcceeccCCC-----------CCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcCC
Confidence 679999999999999999998753 4699999999999999999999999999999999998888999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccC-----------CCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHH
Q 008694 245 PLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRD-----------PSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTT 313 (557)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~i~~l~~~iP~~l~~~~~~ 313 (557)
|+|-++++++..+..+.+.++++.+++....|.. .........++.+|..++.++++++|+|||+++++
T Consensus 328 pLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTL 407 (1034)
T KOG0204|consen 328 PLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTL 407 (1034)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHHHH
Confidence 9999999999998888777777766554433211 11112355677888888889999999999999999
Q ss_pred HHHHHHHHHHhcCceeecchhhhhcccccEEEecCCCccCCCccEEEEEEEecccccCcceeeeeeeccccCCCCccccC
Q 008694 314 CLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDS 393 (557)
Q Consensus 314 ~~~~~~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (557)
++++++++|.+++.++|..+++|++|..++||+|||||||.|+|++.+.|+++..+..+. |.
T Consensus 408 sLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~------------~~------ 469 (1034)
T KOG0204|consen 408 SLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNS------------PK------ 469 (1034)
T ss_pred HHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccC------------cc------
Confidence 999999999999999999999999999999999999999999999999999776332110 00
Q ss_pred CCccccCCCChHHHHH-HHHHhcccccceeec-cCCCCcceecCChhHHHHHHHHHHcCCCCCCCCchhhhhhhhhhccc
Q 008694 394 SGIQLEFPAQLPCLLH-IARCSALCNESVLQY-NPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERAS 471 (557)
Q Consensus 394 ~~~~~~~~~~~~~~~~-~~~~~~lC~~~~~~~-~~~~~~~~~~~~p~E~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~ 471 (557)
..... +.+.. ++.+.+...+..+.. +.+....++.|||+|+|++.|+..+|..+.
T Consensus 470 ---~~~l~---~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~----------------- 526 (1034)
T KOG0204|consen 470 ---SSNLP---PSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQ----------------- 526 (1034)
T ss_pred ---cccCC---HHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchH-----------------
Confidence 00011 12222 333444443433333 333336677899999999999999997542
Q ss_pred ccccccccccceeeeecCCccCceEEEEEeeCCeE-EEEEeCCcHHHHhhcccccccCCCeeecCCHHHHHHHHHHHHHH
Q 008694 472 YCNHHWEIEFKKVSILEFSRDRKMMSVLCSHKQMC-VMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNRL 550 (557)
Q Consensus 472 ~~~~~~~~~~~il~~~~F~s~rk~mSVvv~~~~~~-~l~~KGa~e~il~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 550 (557)
+.+.+.++.+++||||.||||+|+++.++.. ++|+|||+|.||+.|++++.. +|+..+++|+.++.++..++.|
T Consensus 527 ----~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~-~g~~~~~~e~~~~~~~~~Ie~m 601 (1034)
T KOG0204|consen 527 ----DVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDS-NGELVPFNEDDRKSFKDVIEPM 601 (1034)
T ss_pred ----hhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECC-CCCEeeCCHHHHHHHHHHHHHH
Confidence 2356778999999999999999999977632 499999999999999999965 9999999999999999999999
Q ss_pred Hhhhcc
Q 008694 551 DNSILY 556 (557)
Q Consensus 551 ~~~gl~ 556 (557)
|++||-
T Consensus 602 A~~~LR 607 (1034)
T KOG0204|consen 602 ASEGLR 607 (1034)
T ss_pred HHhhhh
Confidence 999983
No 7
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=4.5e-71 Score=620.03 Aligned_cols=463 Identities=26% Similarity=0.398 Sum_probs=395.2
Q ss_pred ChhhhcCCHHHHHHhhCCCCCCCCCHHHHHHHHhhcCCCCCCCcccchHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcC
Q 008694 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALING 80 (557)
Q Consensus 1 ~~~~~~~~~~~~~~~l~~~~~~GL~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 80 (557)
|..++..+++++++.|++++ +||+++|+++|++.||+|+++.++++++|+.++++|+++++++++++++++++++
T Consensus 46 ~~~~~~~~~~~v~~~l~~~~-~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~---- 120 (902)
T PRK10517 46 CLKAAVMPEEELWKTFDTHP-EGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE---- 120 (902)
T ss_pred HHHHHcCCHHHHHHHhCCCC-CCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc----
Confidence 34678889999999999997 6999999999999999999999999999999999999999999999999888764
Q ss_pred CccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeC------CeEEEeeCCCcCCCcEEEEcCCC
Q 008694 81 ETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRN------GCFSILPAAELVPGDIVEVNVGC 154 (557)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~v~r~------g~~~~i~~~~l~~GDIv~l~~g~ 154 (557)
.|..+++++++++++.+++.++++|+++.++.+++..+.+++|+|| |++++|++++|+|||||.+++||
T Consensus 121 -----~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd 195 (902)
T PRK10517 121 -----DLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGD 195 (902)
T ss_pred -----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCC
Confidence 5678888999999999999999999999999999999999999999 78999999999999999999999
Q ss_pred ccccceEEeeecCCeeEEecccccCCcceeecccccccccccccCCCCceEEeeceEeeceEEEEEEEecccchhHHHHH
Q 008694 155 KIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRD 234 (557)
Q Consensus 155 ~vPaD~ill~~~~g~~~vdes~ltGes~~~~k~~~~~~~~~~~~~~~~n~l~~Gs~v~~g~~~~~V~~tG~~T~~~~~~~ 234 (557)
+|||||+|++ +.++.||||+|||||.|+.|.+++.........+..|++|+||.+.+|++.++|++||.+|.+|++.+
T Consensus 196 ~IPaDg~li~--g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~ 273 (902)
T PRK10517 196 MIPADLRILQ--ARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAG 273 (902)
T ss_pred EEeeeEEEEE--cCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHH
Confidence 9999999997 44689999999999999999988644444556678899999999999999999999999999999999
Q ss_pred HhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHH
Q 008694 235 SMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTC 314 (557)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~iP~~l~~~~~~~ 314 (557)
.+..+..+++++++.++++..++..+.++++.++++++.... ..+...+..++++++.++|++||++++++
T Consensus 274 ~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~---------~~~~~~l~~alsv~V~~~Pe~LP~~vt~~ 344 (902)
T PRK10517 274 RVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTK---------GDWWEAALFALSVAVGLTPEMLPMIVTST 344 (902)
T ss_pred HhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhc---------CCHHHHHHHHHHHHHHHcccHHHHHHHHH
Confidence 998888889999999999999888877777766665543211 13445677889999999999999999999
Q ss_pred HHHHHHHHHhcCceeecchhhhhcccccEEEecCCCccCCCccEEEEEEEecccccCcceeeeeeeccccCCCCccccCC
Q 008694 315 LALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSS 394 (557)
Q Consensus 315 ~~~~~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (557)
+..++.+|+++|+++|+.+++|.||.+|+||||||||||+|+|++.++....+ .
T Consensus 345 la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~~-------------------~------- 398 (902)
T PRK10517 345 LARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISG-------------------K------- 398 (902)
T ss_pred HHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCCC-------------------C-------
Confidence 99999999999999999999999999999999999999999999988631100 0
Q ss_pred CccccCCCChHHHHHHHHHhcccccceeeccCCCCcceecCChhHHHHHHHHHHcCCCCCCCCchhhhhhhhhhcccccc
Q 008694 395 GIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCN 474 (557)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~lC~~~~~~~~~~~~~~~~~~~p~E~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 474 (557)
..+.++ ...++|.... . ..++|.|.|++.++...+.
T Consensus 399 --------~~~~ll---~~a~l~~~~~-----~-----~~~~p~d~All~~a~~~~~----------------------- 434 (902)
T PRK10517 399 --------TSERVL---HSAWLNSHYQ-----T-----GLKNLLDTAVLEGVDEESA----------------------- 434 (902)
T ss_pred --------CHHHHH---HHHHhcCCcC-----C-----CCCCHHHHHHHHHHHhcch-----------------------
Confidence 011222 2223332211 1 1379999999998864320
Q ss_pred cccccccceeeeecCCccCceEEEEEeeCC-eEEEEEeCCcHHHHhhcccccccCCCeeecCCHHHHHHHHHHHHHHHhh
Q 008694 475 HHWEIEFKKVSILEFSRDRKMMSVLCSHKQ-MCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNRLDNS 553 (557)
Q Consensus 475 ~~~~~~~~il~~~~F~s~rk~mSVvv~~~~-~~~l~~KGa~e~il~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 553 (557)
......|+.++.+||||+|||||+++++.+ ...+|+|||||.|+++|+++.. +|...+++++.++++.+.+++|+++
T Consensus 435 ~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~--~~~~~~l~~~~~~~i~~~~~~~a~~ 512 (902)
T PRK10517 435 RSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRH--NGEIVPLDDIMLRRIKRVTDTLNRQ 512 (902)
T ss_pred hhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhc--CCCeecCCHHHHHHHHHHHHHHHhc
Confidence 001345788899999999999999998755 6789999999999999998864 6778899999999999999999999
Q ss_pred hcc
Q 008694 554 ILY 556 (557)
Q Consensus 554 gl~ 556 (557)
|+.
T Consensus 513 G~r 515 (902)
T PRK10517 513 GLR 515 (902)
T ss_pred CCE
Confidence 974
No 8
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=5.5e-71 Score=627.11 Aligned_cols=487 Identities=31% Similarity=0.398 Sum_probs=395.9
Q ss_pred CHHHHHHhhCCCCCCCCC--HHHHHHHHhhcCCCCCCCcccchHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcC----C
Q 008694 8 SVVEVLDFFGVDPTKGLT--DSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALING----E 81 (557)
Q Consensus 8 ~~~~~~~~l~~~~~~GL~--~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~ 81 (557)
+++++++.|+++.++||+ ++|+++|+++||+|+++.+++++||++++++|++++++++++++++++++++... .
T Consensus 43 ~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~ 122 (941)
T TIGR01517 43 GAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKA 122 (941)
T ss_pred CHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccC
Confidence 688999999999999999 9999999999999999999999999999999999999999999999998875421 2
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEEeCCeEEEeeCCCcCCCcEEEEcCCCccccce
Q 008694 82 TGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAY-QADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADM 160 (557)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~-~~~~~~v~r~g~~~~i~~~~l~~GDIv~l~~g~~vPaD~ 160 (557)
.....|+.+++++++++++..+..++++++++.++++.+. .+.+++|+|||++++|++++|+|||||.+++||+|||||
T Consensus 123 ~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~ 202 (941)
T TIGR01517 123 DTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADG 202 (941)
T ss_pred ccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccE
Confidence 2334788888888888889999999999999999999864 466899999999999999999999999999999999999
Q ss_pred EEeeecCCeeEEecccccCCcceeecccccccccccccCCCCceEEeeceEeeceEEEEEEEecccchhHHHHHHhcccC
Q 008694 161 RMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTE 240 (557)
Q Consensus 161 ill~~~~g~~~vdes~ltGes~~~~k~~~~~~~~~~~~~~~~n~l~~Gs~v~~g~~~~~V~~tG~~T~~~~~~~~~~~~~ 240 (557)
+|++ +.++.||||+|||||.|+.|.+++ .|++|+||.+.+|++.++|++||.+|..|++.+.+...+
T Consensus 203 ~li~--g~~l~VdES~LTGES~pv~K~~~~-----------~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~ 269 (941)
T TIGR01517 203 VFIS--GLSLEIDESSITGESDPIKKGAPK-----------DSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEG 269 (941)
T ss_pred EEEE--cCcEEEEecccCCCCCcccccCCC-----------CceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCC
Confidence 9997 338999999999999999998753 479999999999999999999999999999999887654
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cC-CCCC-----cchhhHHHHHHHHHHHHHHhcCCchHHHHHH
Q 008694 241 DEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHF-RD-PSHG-----GFLRGAIHYFKIAVALAVAAIPEGLPAVVTT 313 (557)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~-----~~~~~~~~~~~~~i~~l~~~iP~~l~~~~~~ 313 (557)
+++|+++.++++..++..+.++++++.++++...+ .. .... .....+...+..++++++++||++||+++++
T Consensus 270 -~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti 348 (941)
T TIGR01517 270 -EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTI 348 (941)
T ss_pred -CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHH
Confidence 56799999999999888777666666554432211 00 0000 0112456678888999999999999999999
Q ss_pred HHHHHHHHHHhcCceeecchhhhhcccccEEEecCCCccCCCccEEEEEEEecccccCcceeeeeeeccccCCCCccccC
Q 008694 314 CLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDS 393 (557)
Q Consensus 314 ~~~~~~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (557)
++..++.+|+++|+++|+++++|+||++|+||||||||||+|+|++++++..+..+.. +.....
T Consensus 349 ~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~---------------~~~~~~- 412 (941)
T TIGR01517 349 ALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNV---------------RDVLRN- 412 (941)
T ss_pred HHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEec---------------Cccccc-
Confidence 9999999999999999999999999999999999999999999999999865431110 000000
Q ss_pred CCccccCCCChHHHHHHHHHhcccccceeeccCCCCcceecCChhHHHHHHHHHHcCCCCCCCCchhhhhhhhhhccccc
Q 008694 394 SGIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYC 473 (557)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~lC~~~~~~~~~~~~~~~~~~~p~E~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~ 473 (557)
. .....+++.+.+.||+..+....+....+..|+|+|.|+++++.+.|....
T Consensus 413 ------~---~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~------------------- 464 (941)
T TIGR01517 413 ------V---PKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQ------------------- 464 (941)
T ss_pred ------C---CHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHH-------------------
Confidence 0 012333444445555543322111222345699999999999988764210
Q ss_pred ccccccccceeeeecCCccCceEEEEEeeCC-eEEEEEeCCcHHHHhhcccccccCCCeeecCCHHHHHHHHHHHHHHHh
Q 008694 474 NHHWEIEFKKVSILEFSRDRKMMSVLCSHKQ-MCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNRLDN 552 (557)
Q Consensus 474 ~~~~~~~~~il~~~~F~s~rk~mSVvv~~~~-~~~l~~KGa~e~il~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 552 (557)
..+..|++++.+||+|+||||||+++.++ ++++|+|||||.|+++|++++.. +|...++++ .++.+.+.+++|++
T Consensus 465 --~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~-~g~~~~~~~-~~~~i~~~~~~~a~ 540 (941)
T TIGR01517 465 --EVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDS-NGEATPISD-DKDRCADVIEPLAS 540 (941)
T ss_pred --HHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhc-CCCcccCcH-HHHHHHHHHHHHHh
Confidence 01245778889999999999999999766 68999999999999999987533 678888888 88999999999999
Q ss_pred hhcc
Q 008694 553 SILY 556 (557)
Q Consensus 553 ~gl~ 556 (557)
+|+.
T Consensus 541 ~G~R 544 (941)
T TIGR01517 541 DALR 544 (941)
T ss_pred cCCE
Confidence 9973
No 9
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=6.5e-71 Score=624.19 Aligned_cols=492 Identities=57% Similarity=0.870 Sum_probs=395.4
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHhcC-CccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeC
Q 008694 53 VLKQFDDLLVKILIAAAVISFFLALING-ETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRN 131 (557)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~v~r~ 131 (557)
+++||++++.+++++++++++++++... ......|+.+++++++++++..++.++++++++.++++++..+.+++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 3689999999999999999999876532 223357899999999999999999999999999999999999999999999
Q ss_pred CeEEEeeCCCcCCCcEEEEcCCCccccceEEeeecCCeeEEecccccCCcceeecccccccccccccCCCCceEEeeceE
Q 008694 132 GCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVV 211 (557)
Q Consensus 132 g~~~~i~~~~l~~GDIv~l~~g~~vPaD~ill~~~~g~~~vdes~ltGes~~~~k~~~~~~~~~~~~~~~~n~l~~Gs~v 211 (557)
|++++|+++||||||||.+++||+|||||++++ +.++.||||+|||||.|+.|.++..........+++|++|+||.+
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~--~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v 158 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLS--LKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLV 158 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEE--ecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEE
Confidence 999999999999999999999999999999997 457999999999999999999875444444556778999999999
Q ss_pred eeceEEEEEEEecccchhHHHHHHhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCC-CCcchhhHHH
Q 008694 212 VAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPS-HGGFLRGAIH 290 (557)
Q Consensus 212 ~~g~~~~~V~~tG~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 290 (557)
.+|++.++|++||.+|.+|++.+.+...+.+++|+++++++++.++..+.+++++++|++...++.... ...++..+..
T Consensus 159 ~~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 238 (917)
T TIGR01116 159 VAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIY 238 (917)
T ss_pred ecceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHH
Confidence 999999999999999999999999888888899999999999999888877777777765533322211 1234444555
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCceeecchhhhhcccccEEEecCCCccCCCccEEEEEEEeccccc
Q 008694 291 YFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQ 370 (557)
Q Consensus 291 ~~~~~i~~l~~~iP~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~ 370 (557)
.+..+++++++++|++||+++++++.+++++|+++++++|+++++|+||++|+||||||||||+|+|+|.+++..+....
T Consensus 239 ~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~ 318 (917)
T TIGR01116 239 YFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSS 318 (917)
T ss_pred HHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccc
Confidence 66677889999999999999999999999999999999999999999999999999999999999999999988664321
Q ss_pred CcceeeeeeeccccCCCCccccCCCccccCCCChHHHHHHHHHhcccccceeeccCCCCcceecCChhHHHHHHHHHHcC
Q 008694 371 GPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVG 450 (557)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lC~~~~~~~~~~~~~~~~~~~p~E~all~~a~~~g 450 (557)
. ...+...+..|+|.+......... .....+....++.++++||++.+..+++...+...|||+|.||++++.+.|
T Consensus 319 ~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g 394 (917)
T TIGR01116 319 S--LNEFCVTGTTYAPEGGVIKDDGPV--AGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMG 394 (917)
T ss_pred c--cceEEecCCccCCCccccccCCcc--cccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcC
Confidence 1 112233344444432211110000 001123455677889999998775433333344469999999999999999
Q ss_pred CCCCCCCchhhhhhhhhhcccccccccccccceeeeecCCccCceEEEEEeeCCeEEEEEeCCcHHHHhhcccccccCCC
Q 008694 451 LPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNG 530 (557)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rk~mSVvv~~~~~~~l~~KGa~e~il~~c~~~~~~~~g 530 (557)
+....+..+.+.....+.. ...+..|++++++||||+||||||++++++++++|+|||||.|+++|++++.+ +|
T Consensus 395 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~pF~s~rK~msviv~~~~~~~~~~KGApe~il~~c~~~~~~-~g 468 (917)
T TIGR01116 395 LPATKNGVSSKRRPALGCN-----SVWNDKFKKLATLEFSRDRKSMSVLCKPSTGNKLFVKGAPEGVLERCTHILNG-DG 468 (917)
T ss_pred CCchhcccccccccccchh-----HHHHhhcceeeecccChhhCeEEEEEeeCCcEEEEEcCChHHHHHhccceecC-CC
Confidence 8655433222222111100 11245788999999999999999999987788999999999999999988753 68
Q ss_pred eeecCCHHHHHHHHHHHHHHHh-hhcc
Q 008694 531 FIVPMTANIRAELESRLNRLDN-SILY 556 (557)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~-~gl~ 556 (557)
...|+|++.++++.+++++|++ +||+
T Consensus 469 ~~~~l~~~~~~~i~~~~~~~a~~~GlR 495 (917)
T TIGR01116 469 RAVPLTDKMKNTILSVIKEMGTTKALR 495 (917)
T ss_pred CeeeCCHHHHHHHHHHHHHHHhhcCCe
Confidence 8899999999999999999999 9985
No 10
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=1.9e-70 Score=615.42 Aligned_cols=462 Identities=27% Similarity=0.419 Sum_probs=393.4
Q ss_pred ChhhhcCCHHHHHHhhCCCCCCCCCHHHHHHHHhhcCCCCCCCcccchHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcC
Q 008694 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALING 80 (557)
Q Consensus 1 ~~~~~~~~~~~~~~~l~~~~~~GL~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 80 (557)
|.+.|..+.+++++.|+++. +||+++|+++|++.||+|+++.+++.++|+.++++|++++.+++++++++++++.
T Consensus 12 ~~~~~~~~~~~~~~~l~~~~-~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~---- 86 (867)
T TIGR01524 12 LLKESQMGKETLLRKLGVHE-TGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD---- 86 (867)
T ss_pred HHHHHhCCHHHHHHHhCCCC-CCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh----
Confidence 35678899999999999986 7999999999999999999999888889999999999999999999999988764
Q ss_pred CccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEe------CCeEEEeeCCCcCCCcEEEEcCCC
Q 008694 81 ETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLR------NGCFSILPAAELVPGDIVEVNVGC 154 (557)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~v~r------~g~~~~i~~~~l~~GDIv~l~~g~ 154 (557)
.|..+++++++++++.+++.++++++++.++.++++.+.+++|+| ||++++|+++||+|||||.+++||
T Consensus 87 -----~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd 161 (867)
T TIGR01524 87 -----DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGD 161 (867)
T ss_pred -----hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCC
Confidence 577888899999999999999999999999999999999999999 999999999999999999999999
Q ss_pred ccccceEEeeecCCeeEEecccccCCcceeecccccccccccccCCCCceEEeeceEeeceEEEEEEEecccchhHHHHH
Q 008694 155 KIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRD 234 (557)
Q Consensus 155 ~vPaD~ill~~~~g~~~vdes~ltGes~~~~k~~~~~~~~~~~~~~~~n~l~~Gs~v~~g~~~~~V~~tG~~T~~~~~~~ 234 (557)
+|||||+|++ +.++.||||+|||||.|+.|.+++....+....+.+|++|+||.+.+|++.++|++||.+|.+|++.+
T Consensus 162 ~VPaDg~li~--g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~ 239 (867)
T TIGR01524 162 IIPADARVIS--ARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAI 239 (867)
T ss_pred EEcccEEEEe--cCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHH
Confidence 9999999997 44689999999999999999987543344556677899999999999999999999999999999999
Q ss_pred HhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHH
Q 008694 235 SMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTC 314 (557)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~iP~~l~~~~~~~ 314 (557)
.+.. +..++++++.++++..++..+.+++++++++++.... ..+...+..+++++++++|++||++++++
T Consensus 240 ~v~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~---------~~~~~~~~~al~l~v~~iP~~Lp~~vt~~ 309 (867)
T TIGR01524 240 AATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMK---------GDWLEAFLFALAVAVGLTPEMLPMIVSSN 309 (867)
T ss_pred HhhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHhc---------CCHHHHHHHHHHHHHHhCcchHHHHHHHH
Confidence 8877 6667899999999999988877777766655543211 12445677889999999999999999999
Q ss_pred HHHHHHHHHhcCceeecchhhhhcccccEEEecCCCccCCCccEEEEEEEecccccCcceeeeeeeccccCCCCccccCC
Q 008694 315 LALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSS 394 (557)
Q Consensus 315 ~~~~~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (557)
+..++.+|+++|+++|+.+++|.||.+|+||||||||||+|+|++.+++..++ .
T Consensus 310 la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~-------------------~------- 363 (867)
T TIGR01524 310 LAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSG-------------------E------- 363 (867)
T ss_pred HHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCC-------------------C-------
Confidence 99999999999999999999999999999999999999999999998642110 0
Q ss_pred CccccCCCChHHHHHHHHHhcccccceeeccCCCCcceecCChhHHHHHHHHHHcCCCCCCCCchhhhhhhhhhcccccc
Q 008694 395 GIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCN 474 (557)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~lC~~~~~~~~~~~~~~~~~~~p~E~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 474 (557)
..+.++ ...++|+... . ..++|.|.|+++++.+....
T Consensus 364 --------~~~~~l---~~a~l~~~~~------~----~~~~p~~~Al~~~~~~~~~~---------------------- 400 (867)
T TIGR01524 364 --------TSERVL---KMAWLNSYFQ------T----GWKNVLDHAVLAKLDESAAR---------------------- 400 (867)
T ss_pred --------CHHHHH---HHHHHhCCCC------C----CCCChHHHHHHHHHHhhchh----------------------
Confidence 011222 2223332211 0 12699999999988653110
Q ss_pred cccccccceeeeecCCccCceEEEEEeeCC-eEEEEEeCCcHHHHhhcccccccCCCeeecCCHHHHHHHHHHHHHHHhh
Q 008694 475 HHWEIEFKKVSILEFSRDRKMMSVLCSHKQ-MCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNRLDNS 553 (557)
Q Consensus 475 ~~~~~~~~il~~~~F~s~rk~mSVvv~~~~-~~~l~~KGa~e~il~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 553 (557)
..+..|+.++.+||||+||+|++++++.+ ..++|+|||||.|+++|+++.. +|...+++++.++++.+.+++|+++
T Consensus 401 -~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~--~~~~~~l~~~~~~~i~~~~~~~a~~ 477 (867)
T TIGR01524 401 -QTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRF--GGAVVTLSESEKSELQDMTAEMNRQ 477 (867)
T ss_pred -hHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhc--CCceecCCHHHHHHHHHHHHHHHhc
Confidence 00245778889999999999999998766 5789999999999999998864 6788899999999999999999999
Q ss_pred hcc
Q 008694 554 ILY 556 (557)
Q Consensus 554 gl~ 556 (557)
|+.
T Consensus 478 G~r 480 (867)
T TIGR01524 478 GIR 480 (867)
T ss_pred CCE
Confidence 974
No 11
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=9.2e-70 Score=610.43 Aligned_cols=471 Identities=29% Similarity=0.376 Sum_probs=393.8
Q ss_pred ChhhhcCCHHHHHHhhCCCCCCCCCHHHHHHHHhhcCCCCCCCcccchHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcC
Q 008694 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALING 80 (557)
Q Consensus 1 ~~~~~~~~~~~~~~~l~~~~~~GL~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 80 (557)
|...|+.+++++++.|+++. +|||++|+++|+++||+|+++.++..++|+.++++|++++.+++++++++++++.++..
T Consensus 24 ~~~~~~~~~~~v~~~l~~~~-~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~ 102 (903)
T PRK15122 24 IAREAANSLEETLANLNTHR-QGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLP 102 (903)
T ss_pred HHHHHhCCHHHHHHHhCCCC-CCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhh
Confidence 35679999999999999995 79999999999999999999998888999999999999999999999999999875431
Q ss_pred --CccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeC------CeEEEeeCCCcCCCcEEEEcC
Q 008694 81 --ETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRN------GCFSILPAAELVPGDIVEVNV 152 (557)
Q Consensus 81 --~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~v~r~------g~~~~i~~~~l~~GDIv~l~~ 152 (557)
......|..+++++++++++.+++.++++++++.++++++..+.+++|+|| |++++|++++|+|||+|.+++
T Consensus 103 ~~~~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~ 182 (903)
T PRK15122 103 LRRGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSA 182 (903)
T ss_pred ccCCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECC
Confidence 112246888999999999999999999999999999999999999999999 489999999999999999999
Q ss_pred CCccccceEEeeecCCeeEEecccccCCcceeecccc--c--------ccccccccCCCCceEEeeceEeeceEEEEEEE
Q 008694 153 GCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELD--S--------IIATNAVYQDKTNILFSGTVVVAGRARAVVVG 222 (557)
Q Consensus 153 g~~vPaD~ill~~~~g~~~vdes~ltGes~~~~k~~~--~--------~~~~~~~~~~~~n~l~~Gs~v~~g~~~~~V~~ 222 (557)
||+|||||+|++ +.++.||||+|||||.|+.|.+. . .........+++|++|+||.+.+|++.++|++
T Consensus 183 Gd~IPaDg~li~--g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~a 260 (903)
T PRK15122 183 GDMIPADVRLIE--SRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVA 260 (903)
T ss_pred CCEEeeeEEEEE--cCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEE
Confidence 999999999997 45689999999999999999862 1 11123345567899999999999999999999
Q ss_pred ecccchhHHHHHHhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCcchhhHHHHHHHHHHHHHHh
Q 008694 223 VGANTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAA 302 (557)
Q Consensus 223 tG~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~ 302 (557)
||.+|.+|++.+.+.. +..++++++.++++..++..+.++++.+++++..... ..+...+..++++++++
T Consensus 261 tG~~T~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~---------~~~~~~l~~aisl~V~~ 330 (903)
T PRK15122 261 TGSRTYFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTK---------GDWLEALLFALAVAVGL 330 (903)
T ss_pred eccccHhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc---------CCHHHHHHHHHHHHHHH
Confidence 9999999999998876 5567899999999988877766666555544432211 13455677889999999
Q ss_pred cCCchHHHHHHHHHHHHHHHHhcCceeecchhhhhcccccEEEecCCCccCCCccEEEEEEEecccccCcceeeeeeecc
Q 008694 303 IPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGT 382 (557)
Q Consensus 303 iP~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 382 (557)
+|++||+++++++..++.+|+++|+++|+.+++|+||++|+||||||||||+|+|++.+++..++.
T Consensus 331 ~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~-------------- 396 (903)
T PRK15122 331 TPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGR-------------- 396 (903)
T ss_pred ccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCC--------------
Confidence 999999999999999999999999999999999999999999999999999999999997632210
Q ss_pred ccCCCCccccCCCccccCCCChHHHHHHHHHhcccccceeeccCCCCcceecCChhHHHHHHHHHHcCCCCCCCCchhhh
Q 008694 383 TYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALN 462 (557)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lC~~~~~~~~~~~~~~~~~~~p~E~all~~a~~~g~~~~~~~~~~~~ 462 (557)
..+.++.. .++|... +. ..++|.|.|+++++.+.|....
T Consensus 397 --------------------~~~~~l~~---a~l~s~~------~~----~~~~p~e~All~~a~~~~~~~~-------- 435 (903)
T PRK15122 397 --------------------KDERVLQL---AWLNSFH------QS----GMKNLMDQAVVAFAEGNPEIVK-------- 435 (903)
T ss_pred --------------------ChHHHHHH---HHHhCCC------CC----CCCChHHHHHHHHHHHcCchhh--------
Confidence 00122222 2222110 00 1379999999999987653200
Q ss_pred hhhhhhcccccccccccccceeeeecCCccCceEEEEEeeC-CeEEEEEeCCcHHHHhhcccccccCCCeeecCCHHHHH
Q 008694 463 MLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHK-QMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRA 541 (557)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rk~mSVvv~~~-~~~~l~~KGa~e~il~~c~~~~~~~~g~~~~~~~~~~~ 541 (557)
...|+.++.+||++.||+|++++++. +++++|+|||||.|+++|+++.. +|...+++++.|+
T Consensus 436 ---------------~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~--~~~~~~l~~~~~~ 498 (903)
T PRK15122 436 ---------------PAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRD--GDTVRPLDEARRE 498 (903)
T ss_pred ---------------hhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhc--CCCeecCCHHHHH
Confidence 23567888999999999999999974 47889999999999999998764 6788899999999
Q ss_pred HHHHHHHHHHhhhcc
Q 008694 542 ELESRLNRLDNSILY 556 (557)
Q Consensus 542 ~~~~~~~~~~~~gl~ 556 (557)
++.+.+++|+++|+.
T Consensus 499 ~i~~~~~~~a~~G~r 513 (903)
T PRK15122 499 RLLALAEAYNADGFR 513 (903)
T ss_pred HHHHHHHHHHhCCCE
Confidence 999999999999964
No 12
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=1.9e-67 Score=599.46 Aligned_cols=494 Identities=20% Similarity=0.178 Sum_probs=351.0
Q ss_pred hhcCCCCCCCcccchH---HHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCccccchhhHHHHHHHHHHHHHHHHHHHHH
Q 008694 34 RIYGKNVLPQEKRTAF---WKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITETN 110 (557)
Q Consensus 34 ~~~G~N~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 110 (557)
..|+.|.+.+.||+.| ++.+++||+++.+++++++++++++..+.+. .....+...++++++..+..+++.+..++
T Consensus 85 ~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~-~~~t~~~PL~~vl~v~~ike~~Ed~~r~k 163 (1178)
T PLN03190 85 FEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVF-GRGASILPLAFVLLVTAVKDAYEDWRRHR 163 (1178)
T ss_pred ccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccC-CcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3589999999998733 4445566666666666666665554432221 11112222222222222233333333333
Q ss_pred HHHHHHHHHhcCCCeEEEEeCCeEEEeeCCCcCCCcEEEEcCCCccccceEEeeecC--CeeEEecccccCCcceeeccc
Q 008694 111 AEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLS--NQLRVDQAILTGESCSVEKEL 188 (557)
Q Consensus 111 ~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDIv~l~~g~~vPaD~ill~~~~--g~~~vdes~ltGes~~~~k~~ 188 (557)
+++. .++..++|+|+|.+++++|++|+|||||+|++||++|||+++|++++ |.|+|||++||||+.|+.|.+
T Consensus 164 ~d~~------~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~ 237 (1178)
T PLN03190 164 SDRI------ENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYA 237 (1178)
T ss_pred hHHh------hcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecc
Confidence 3332 23457899999999999999999999999999999999999998764 889999999999999999986
Q ss_pred ccccc--------------------------------cccccCCCCceEEeeceEee-ceEEEEEEEecccchhHHHHHH
Q 008694 189 DSIIA--------------------------------TNAVYQDKTNILFSGTVVVA-GRARAVVVGVGANTAMGSIRDS 235 (557)
Q Consensus 189 ~~~~~--------------------------------~~~~~~~~~n~l~~Gs~v~~-g~~~~~V~~tG~~T~~~~~~~~ 235 (557)
+.... ......+.+|++++||.+++ .+++|+|+|||++|+. +.+
T Consensus 238 ~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~---~~N 314 (1178)
T PLN03190 238 KQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKA---MLN 314 (1178)
T ss_pred cchhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhH---hhc
Confidence 53210 11224556899999999998 4899999999999964 333
Q ss_pred hcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC----CCCcch-------------------hhHHHHH
Q 008694 236 MLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDP----SHGGFL-------------------RGAIHYF 292 (557)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-------------------~~~~~~~ 292 (557)
...++.|.+++++.++++..+++.+++++|+++.+....|.... ++..|+ ...+..|
T Consensus 315 ~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 394 (1178)
T PLN03190 315 NSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTF 394 (1178)
T ss_pred CCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHH
Confidence 34556788999999999999988888888888766543332110 000000 1113345
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcC----------ceeecchhhhhcccccEEEecCCCccCCCccEEEEE
Q 008694 293 KIAVALAVAAIPEGLPAVVTTCLALGTKRMARLN----------AIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKI 362 (557)
Q Consensus 293 ~~~i~~l~~~iP~~l~~~~~~~~~~~~~~~~~~~----------i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~ 362 (557)
..+++++..++|++|++++++++..++.+|.++. +.+|+.+.+|+||+|++||+|||||||+|+|+|++|
T Consensus 395 ~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~ 474 (1178)
T PLN03190 395 LMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCA 474 (1178)
T ss_pred HHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEE
Confidence 5567788899999999999999999999997755 789999999999999999999999999999999999
Q ss_pred EEecccccCcceee------e--eeeccccCCCCccccCCCcc-----ccCCCChHHHHHHHHHhcccccceeeccCC--
Q 008694 363 CVVHSVQQGPIIAE------Y--GVTGTTYAPEGVVFDSSGIQ-----LEFPAQLPCLLHIARCSALCNESVLQYNPD-- 427 (557)
Q Consensus 363 ~~~~~~~~~~~~~~------~--~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~lC~~~~~~~~~~-- 427 (557)
++++..+..+.... + ...+..+.+........... .......+.+.+|+.|+++||++.+....+
T Consensus 475 ~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~ 554 (1178)
T PLN03190 475 SIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTS 554 (1178)
T ss_pred EECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCC
Confidence 99876553211100 0 00111111111110000000 000111234677999999999998752111
Q ss_pred C----CcceecCChhHHHHHHHHHHcCCCCCCCCchhhhhhhhhhcccccccccccccceeeeecCCccCceEEEEEeeC
Q 008694 428 K----GNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHK 503 (557)
Q Consensus 428 ~----~~~~~~~~p~E~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rk~mSVvv~~~ 503 (557)
. ...|.++||||+||+++|+++|+.+..|+++.+.+...+. +..|++++++||+|+||||||||+++
T Consensus 555 ~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~---------~~~~~il~~~pF~S~rKrMSvIv~~~ 625 (1178)
T PLN03190 555 DPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGE---------RQRFNVLGLHEFDSDRKRMSVILGCP 625 (1178)
T ss_pred CccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccc---------eecceeEEEecccccccEEEEEEEcC
Confidence 1 1236667999999999999999999999998887655543 57899999999999999999999987
Q ss_pred C-eEEEEEeCCcHHHHhhcccccccCCCeeecCCHHHHHHHHHHHHHHHhhhcc
Q 008694 504 Q-MCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNRLDNSILY 556 (557)
Q Consensus 504 ~-~~~l~~KGa~e~il~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gl~ 556 (557)
+ ++++|+|||||.|+++|+... +++.++++.+++++|+++||.
T Consensus 626 ~~~~~l~~KGA~e~il~~~~~~~----------~~~~~~~~~~~l~~~a~~GlR 669 (1178)
T PLN03190 626 DKTVKVFVKGADTSMFSVIDRSL----------NMNVIRATEAHLHTYSSLGLR 669 (1178)
T ss_pred CCcEEEEEecCcHHHHHhhcccc----------cchhHHHHHHHHHHHHhcCCc
Confidence 6 789999999999999998653 234677899999999999984
No 13
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=6.3e-66 Score=590.92 Aligned_cols=464 Identities=21% Similarity=0.237 Sum_probs=356.9
Q ss_pred CCCCCHHHHHHHHhhcCCCCCCCcccchHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCccccchhhHHHHHHHHHHH
Q 008694 21 TKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAAN 100 (557)
Q Consensus 21 ~~GL~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (557)
.+||+++|+++|++.||+|+++.++ +++|+++++++.+|+.++++++.+++++. .+|+++++++++++++
T Consensus 137 ~~GLs~~e~~~r~~~yG~N~i~~~~-~s~~~ll~~~~~~p~~i~~i~~~~l~~~~---------~~~~~~~~i~~i~~~~ 206 (1054)
T TIGR01657 137 SNGLTTGDIAQRKAKYGKNEIEIPV-PSFLELLKEEVLHPFYVFQVFSVILWLLD---------EYYYYSLCIVFMSSTS 206 (1054)
T ss_pred ccCCCHHHHHHHHHhcCCCeeecCC-CCHHHHHHHHHhchHHHHHHHHHHHHHhh---------hhHHHHHHHHHHHHHH
Confidence 4699999999999999999999854 68999999999999998887776655443 2577888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEEEeCCeEEEeeCCCcCCCcEEEEc--CCCccccceEEeeecCCeeEEeccccc
Q 008694 101 AAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVN--VGCKIPADMRMIEMLSNQLRVDQAILT 178 (557)
Q Consensus 101 ~~i~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDIv~l~--~g~~vPaD~ill~~~~g~~~vdes~lt 178 (557)
..+..++++++.+.++++.. .+..++|+|||++++|+++||+|||||.++ +|++|||||+|++ |++.||||+||
T Consensus 207 ~~~~~~~~~k~~~~L~~~~~-~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~---g~~~VdES~LT 282 (1054)
T TIGR01657 207 ISLSVYQIRKQMQRLRDMVH-KPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLS---GSCIVNESMLT 282 (1054)
T ss_pred HHHHHHHHHHHHHHHHHhhc-CCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEe---CcEEEeccccc
Confidence 99999999999999988765 356799999999999999999999999999 9999999999996 78999999999
Q ss_pred CCcceeeccccccc--cc---ccccCCCCceEEeeceEee-------ceEEEEEEEecccchhHHHHHHhcccCCCCChh
Q 008694 179 GESCSVEKELDSII--AT---NAVYQDKTNILFSGTVVVA-------GRARAVVVGVGANTAMGSIRDSMLQTEDEVTPL 246 (557)
Q Consensus 179 Ges~~~~k~~~~~~--~~---~~~~~~~~n~l~~Gs~v~~-------g~~~~~V~~tG~~T~~~~~~~~~~~~~~~~~~~ 246 (557)
|||.|+.|.+.... .. .....++.|++|+||.+++ |.+.++|++||.+|..|++.+.+..++...+++
T Consensus 283 GES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~ 362 (1054)
T TIGR01657 283 GESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKF 362 (1054)
T ss_pred CCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCch
Confidence 99999999886421 11 1123467899999999985 789999999999999999999998887788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcC
Q 008694 247 KKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLN 326 (557)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~iP~~l~~~~~~~~~~~~~~~~~~~ 326 (557)
++.+.++...++.++++.+++.++.... .. ..+...+..++.++++++|++||++++++..+++.+|++++
T Consensus 363 ~~~~~~~~~~l~~~a~i~~i~~~~~~~~--~~-------~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~ 433 (1054)
T TIGR01657 363 YKDSFKFILFLAVLALIGFIYTIIELIK--DG-------RPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKG 433 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--cC-------CcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCC
Confidence 8888777666554443333322222111 11 13455677889999999999999999999999999999999
Q ss_pred ceeecchhhhhcccccEEEecCCCccCCCccEEEEEEEecccccCcceeeeeeeccccCCCCccccCCCccccCCCChHH
Q 008694 327 AIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPC 406 (557)
Q Consensus 327 i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (557)
++|+++.++|.+|++|++|||||||||+|+|+|.+++..+..... ... ..+ .....
T Consensus 434 il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~-------------~~~--~~~---------~~~~~ 489 (1054)
T TIGR01657 434 IFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEF-------------LKI--VTE---------DSSLK 489 (1054)
T ss_pred EEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCcccc-------------ccc--ccc---------ccccC
Confidence 999999999999999999999999999999999999865431000 000 000 00011
Q ss_pred HHHHHHHhcccccceeeccCCCCcceecCChhHHHHHHHHHHcCCCCCCCCchhhhhhhhhhcccccccccccccceeee
Q 008694 407 LLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSI 486 (557)
Q Consensus 407 ~~~~~~~~~lC~~~~~~~~~~~~~~~~~~~p~E~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~ 486 (557)
...+..++++||++.... + ...|||.|.|+++++ |+................. ... ......+++++.
T Consensus 490 ~~~~~~~~a~C~~~~~~~--~----~~~Gdp~E~al~~~~---~~~~~~~~~~~~~~~~~~~-i~~--~~~~~~~~il~~ 557 (1054)
T TIGR01657 490 PSITHKALATCHSLTKLE--G----KLVGDPLDKKMFEAT---GWTLEEDDESAEPTSILAV-VRT--DDPPQELSIIRR 557 (1054)
T ss_pred chHHHHHHHhCCeeEEEC--C----EEecCHHHHHHHHhC---CCEEECCCCcccccccccc-eec--cCCCceEEEEEE
Confidence 123456779999986532 1 356999999999976 4332110000000000000 000 000246899999
Q ss_pred ecCCccCceEEEEEeeCC--eEEEEEeCCcHHHHhhcccccccCCCeeecCCHHHHHHHHHHHHHHHhhhcc
Q 008694 487 LEFSRDRKMMSVLCSHKQ--MCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNRLDNSILY 556 (557)
Q Consensus 487 ~~F~s~rk~mSVvv~~~~--~~~l~~KGa~e~il~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gl~ 556 (557)
+||+|+|||||||++.++ ++++|+|||||.|+++|++.. .++.+.+.+++|+++|++
T Consensus 558 ~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~~-------------~p~~~~~~~~~~a~~G~R 616 (1054)
T TIGR01657 558 FQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPET-------------VPSDYQEVLKSYTREGYR 616 (1054)
T ss_pred EeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCcC-------------CChhHHHHHHHHHhcCCE
Confidence 999999999999999754 678999999999999999521 235677889999999985
No 14
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=3.7e-66 Score=594.64 Aligned_cols=493 Identities=22% Similarity=0.233 Sum_probs=361.2
Q ss_pred cCCCCCCCcccchH---HHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 008694 36 YGKNVLPQEKRTAF---WKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITETNAE 112 (557)
Q Consensus 36 ~G~N~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 112 (557)
|+.|.+.+.||+.| ++.+++||+++.+++++++++++++..+.+. + .+...+.++++++++.+...+.+++..
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~--~--~~t~~~pL~~v~~~~~~~~~~ed~~r~ 76 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPT--Y--RGTSIVPLAFVLIVTAIKEAIEDIRRR 76 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCC--C--ccHhHHhHHHHHHHHHHHHHHHHHHHH
Confidence 67899999999877 7889999999999999999998887644321 1 122222333333344444444444443
Q ss_pred HHHHHHHhcCCCeEEEEeC-CeEEEeeCCCcCCCcEEEEcCCCccccceEEeeecC--CeeEEecccccCCcceeecccc
Q 008694 113 KALEELRAYQADIATVLRN-GCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLS--NQLRVDQAILTGESCSVEKELD 189 (557)
Q Consensus 113 ~~~~~l~~~~~~~~~v~r~-g~~~~i~~~~l~~GDIv~l~~g~~vPaD~ill~~~~--g~~~vdes~ltGes~~~~k~~~ 189 (557)
+.-+. .+.+.++|+|+ |++++++|+||+|||||++++||+||||++||++++ |.|+||||+||||+.|+.|.+.
T Consensus 77 ~~d~~---~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~ 153 (1057)
T TIGR01652 77 RRDKE---VNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQAL 153 (1057)
T ss_pred HhHHH---HhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecc
Confidence 33322 34567999997 899999999999999999999999999999998764 7899999999999999999864
Q ss_pred cccc-------------------c----------------ccccCCCCceEEeeceEee-ceEEEEEEEecccchhHHHH
Q 008694 190 SIIA-------------------T----------------NAVYQDKTNILFSGTVVVA-GRARAVVVGVGANTAMGSIR 233 (557)
Q Consensus 190 ~~~~-------------------~----------------~~~~~~~~n~l~~Gs~v~~-g~~~~~V~~tG~~T~~~~~~ 233 (557)
.... + ...+.+.+|++|+||.+++ |+++|+|++||++|++++.
T Consensus 154 ~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n- 232 (1057)
T TIGR01652 154 EETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRN- 232 (1057)
T ss_pred hhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhc-
Confidence 2110 0 1234567899999999999 9999999999999977653
Q ss_pred HHhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCcc-----------hhhHHHHHHHHHHHHHHh
Q 008694 234 DSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGF-----------LRGAIHYFKIAVALAVAA 302 (557)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~i~~l~~~ 302 (557)
....+.+.+++++.++++..+++.+++++|++++++...+........| ...++..+..++.++..+
T Consensus 233 --~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~ 310 (1057)
T TIGR01652 233 --ATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSL 310 (1057)
T ss_pred --CCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhh
Confidence 3455677899999999999998888888888877765443221000011 123444677888999999
Q ss_pred cCCchHHHHHHHHHHHH------HHHHhc----CceeecchhhhhcccccEEEecCCCccCCCccEEEEEEEecccccCc
Q 008694 303 IPEGLPAVVTTCLALGT------KRMARL----NAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGP 372 (557)
Q Consensus 303 iP~~l~~~~~~~~~~~~------~~~~~~----~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~ 372 (557)
+|++|++++++++.+++ .+|.++ ++.+|+.+++|+||+|++||+|||||||+|+|+|++|++++..+...
T Consensus 311 IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~ 390 (1057)
T TIGR01652 311 IPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDG 390 (1057)
T ss_pred cceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCC
Confidence 99999999999999999 667653 59999999999999999999999999999999999999887654321
Q ss_pred cee--eeeeeccc-cCC-------CC--ccccCCCc--cc-cCCCChHHHHHHHHHhcccccceeeccCC--CCcceecC
Q 008694 373 IIA--EYGVTGTT-YAP-------EG--VVFDSSGI--QL-EFPAQLPCLLHIARCSALCNESVLQYNPD--KGNYEKIG 435 (557)
Q Consensus 373 ~~~--~~~~~~~~-~~~-------~~--~~~~~~~~--~~-~~~~~~~~~~~~~~~~~lC~~~~~~~~~~--~~~~~~~~ 435 (557)
... ....+... +.+ .. ...+.... .. ......+.+.+++.++++||++.+..+++ ....+..+
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~ 470 (1057)
T TIGR01652 391 FTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAA 470 (1057)
T ss_pred cchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEcc
Confidence 110 00000000 000 00 00000000 00 01112345677899999999998764222 22345569
Q ss_pred ChhHHHHHHHHHHcCCCCCCCCchhhhhhhhhhcccccccccccccceeeeecCCccCceEEEEEeeCC-eEEEEEeCCc
Q 008694 436 EATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHKQ-MCVMFSKGAP 514 (557)
Q Consensus 436 ~p~E~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rk~mSVvv~~~~-~~~l~~KGa~ 514 (557)
||+|.||+++|+.+|+.+..++++++.+..+.. .....|++++++||||+||||||||++++ ++++|+||||
T Consensus 471 sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~-------~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~ 543 (1057)
T TIGR01652 471 SPDEAALVKAARDVGFVFFERTPKSISLLIEMH-------GETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGAD 543 (1057)
T ss_pred CCcHHHHHHHHHHCCCEEEEecCCceEEEEEeC-------CCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcH
Confidence 999999999999999998887766444322211 11357999999999999999999999876 7899999999
Q ss_pred HHHHhhcccccccCCCeeecCCHHHHHHHHHHHHHHHhhhcc
Q 008694 515 ESVLSRCTNILCNDNGFIVPMTANIRAELESRLNRLDNSILY 556 (557)
Q Consensus 515 e~il~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gl~ 556 (557)
|.|+++|+.. +++.++++.+++++|+++||.
T Consensus 544 e~il~~~~~~-----------~~~~~~~~~~~~~~~a~~GlR 574 (1057)
T TIGR01652 544 TVIFKRLSSG-----------GNQVNEETKEHLENYASEGLR 574 (1057)
T ss_pred HHHHHHhhcc-----------chhHHHHHHHHHHHHHHcCCc
Confidence 9999999841 356678899999999999984
No 15
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=6.3e-65 Score=563.97 Aligned_cols=416 Identities=31% Similarity=0.448 Sum_probs=355.9
Q ss_pred CCCHHHHHHHHhhcCCCCCCCcccchHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCccccchhhHHHHHHHHHHHHH
Q 008694 23 GLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAA 102 (557)
Q Consensus 23 GL~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (557)
|||++|+++|+++||+|+++.. ..++|+.++++|++++.++++++++++++++ .|..+++++++++++..
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~~-~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~---------~~~~~~~i~~~~~i~~~ 70 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPEK-KVSPLLKFLGFFWNPLSWVMEAAAIIAIALE---------NWVDFVIILGLLLLNAT 70 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCCC-CCCHHHHHHHHHhchHHHHHHHHHHHHHhhc---------chhhhhhhhhhhHHHHH
Confidence 8999999999999999999984 4457899999999999999999999988875 46778888899999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEEEeCCeEEEeeCCCcCCCcEEEEcCCCccccceEEeeecCCeeEEecccccCCcc
Q 008694 103 VGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESC 182 (557)
Q Consensus 103 i~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDIv~l~~g~~vPaD~ill~~~~g~~~vdes~ltGes~ 182 (557)
+++++++++++.++.+++..+.+++|+|||++++|+++||+|||||.+++||+|||||+|++ +.++.||||+|||||.
T Consensus 71 i~~~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~--g~~~~VDeS~LTGES~ 148 (755)
T TIGR01647 71 IGFIEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFE--GDYIQVDQAALTGESL 148 (755)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEe--cCceEEEcccccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999997 2349999999999999
Q ss_pred eeecccccccccccccCCCCceEEeeceEeeceEEEEEEEecccchhHHHHHHhcccCCCCChhHHHHHHHHHHHHHHHH
Q 008694 183 SVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIA 262 (557)
Q Consensus 183 ~~~k~~~~~~~~~~~~~~~~n~l~~Gs~v~~g~~~~~V~~tG~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (557)
|+.|.++ |.+|+||.+.+|++.++|++||.+|.+|++.+.+...+..++++++.+++++.+++.+.+
T Consensus 149 PV~K~~~-------------~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~ 215 (755)
T TIGR01647 149 PVTKKTG-------------DIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIG 215 (755)
T ss_pred ceEeccC-------------CeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHH
Confidence 9999875 699999999999999999999999999999999988877888999999999999988887
Q ss_pred HHHHHHHHHHhhcccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCceeecchhhhhccccc
Q 008694 263 GICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTT 342 (557)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~iP~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~Lg~v~ 342 (557)
+++++.++++..... ..+...+.+++++++++||++||+++++++..++.+|+++|+++|+.+++|.||.+|
T Consensus 216 ~~~~i~~~~~~~~~~--------~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~ 287 (755)
T TIGR01647 216 VLVLIELVVLFFGRG--------ESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMD 287 (755)
T ss_pred HHHHHHHHHHHHHcC--------CCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCc
Confidence 777777766543111 134556778899999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCccCCCccEEEEEEEecccccCcceeeeeeeccccCCCCccccCCCccccCCCChHHHHHHHHHhccccccee
Q 008694 343 VICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNESVL 422 (557)
Q Consensus 343 ~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lC~~~~~ 422 (557)
+||||||||||+|+|++.+++..++. + ..+++ +...++|+..
T Consensus 288 ~i~~DKTGTLT~~~~~v~~~~~~~~~---------------~------------------~~~~~---l~~a~~~~~~-- 329 (755)
T TIGR01647 288 ILCSDKTGTLTLNKLSIDEILPFFNG---------------F------------------DKDDV---LLYAALASRE-- 329 (755)
T ss_pred EEEecCCCccccCceEEEEEEecCCC---------------C------------------CHHHH---HHHHHHhCCC--
Confidence 99999999999999999998753310 0 01122 2233444321
Q ss_pred eccCCCCcceecCChhHHHHHHHHHHcCCCCCCCCchhhhhhhhhhcccccccccccccceeeeecCCccCceEEEEEee
Q 008694 423 QYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSH 502 (557)
Q Consensus 423 ~~~~~~~~~~~~~~p~E~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rk~mSVvv~~ 502 (557)
..++|.|.|+++++.+.+. .+..|++++.+||||.+|+|+++++.
T Consensus 330 ----------~~~~pi~~Ai~~~~~~~~~-------------------------~~~~~~~~~~~pf~~~~k~~~~~v~~ 374 (755)
T TIGR01647 330 ----------EDQDAIDTAVLGSAKDLKE-------------------------ARDGYKVLEFVPFDPVDKRTEATVED 374 (755)
T ss_pred ----------CCCChHHHHHHHHHHHhHH-------------------------HHhcCceEEEeccCCCCCeEEEEEEe
Confidence 1268999999998865320 02356788899999999999999986
Q ss_pred C--CeEEEEEeCCcHHHHhhcccccccCCCeeecCCHHHHHHHHHHHHHHHhhhcc
Q 008694 503 K--QMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNRLDNSILY 556 (557)
Q Consensus 503 ~--~~~~l~~KGa~e~il~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gl~ 556 (557)
+ ++.++|+|||||.|+++|++. ++.++++.+.+++|+++|+.
T Consensus 375 ~~~g~~~~~~kGa~e~il~~c~~~------------~~~~~~~~~~~~~~~~~G~r 418 (755)
T TIGR01647 375 PETGKRFKVTKGAPQVILDLCDNK------------KEIEEKVEEKVDELASRGYR 418 (755)
T ss_pred CCCceEEEEEeCChHHHHHhcCCc------------HHHHHHHHHHHHHHHhCCCE
Confidence 4 467789999999999999842 34567788899999999974
No 16
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.5e-63 Score=513.99 Aligned_cols=497 Identities=29% Similarity=0.413 Sum_probs=422.0
Q ss_pred hhhcCCHHHHHHhhCCCCCCCCCHHHHHHHHhhcCCCCCCCcccchHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcC--
Q 008694 3 DAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALING-- 80 (557)
Q Consensus 3 ~~~~~~~~~~~~~l~~~~~~GL~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-- 80 (557)
+-|.+|++||+++|.++..+||+.+++.+++.+.|+|.+++++.++-|..+.+|++..+.+++++.++++++.+.+..
T Consensus 38 ~~H~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~ 117 (1019)
T KOG0203|consen 38 DDHKLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQAST 117 (1019)
T ss_pred ccccCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhccc
Confidence 459999999999999999999999999999999999999999999999999999999999999999999998876643
Q ss_pred --CccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeCCeEEEeeCCCcCCCcEEEEcCCCcccc
Q 008694 81 --ETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPA 158 (557)
Q Consensus 81 --~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDIv~l~~g~~vPa 158 (557)
..+....+.++++..++++.+.+.++++.+..+.++.++++.|..+.|+|||+...+..++||+||+|.++-||+|||
T Consensus 118 ~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~GdrVPA 197 (1019)
T KOG0203|consen 118 EDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGDLVEVKGGDRVPA 197 (1019)
T ss_pred CCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcccccceeeccCCcccc
Confidence 223455666777777788888899999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEeeecCCeeEEecccccCCcceeecccccccccccccCCCCceEEeeceEeeceEEEEEEEecccchhHHHHHHhcc
Q 008694 159 DMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQ 238 (557)
Q Consensus 159 D~ill~~~~g~~~vdes~ltGes~~~~k~~~~~~~~~~~~~~~~n~l~~Gs~v~~g~~~~~V~~tG~~T~~~~~~~~~~~ 238 (557)
|++++. +..+++|+|++|||+.|..+.+... ...+....|+.|.+|.+++|.+.|+|++||.+|.+|+++.....
T Consensus 198 DiRiis--~~g~~vdnsslTGesEP~~~~~~~t---~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~ 272 (1019)
T KOG0203|consen 198 DIRIIS--ATGCKVDNSSLTGESEPQTRSPEFT---HENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLASG 272 (1019)
T ss_pred eeEEEE--ecceeEeccccccccCCccCCcccc---ccCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhhcc
Confidence 999998 6889999999999999999988642 23337778999999999999999999999999999999988888
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 008694 239 TEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALG 318 (557)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~iP~~l~~~~~~~~~~~ 318 (557)
....++|+++.++++..++..+++.+++..|++....- ..+...+.+++.++++.+|.+|+.+++.++..-
T Consensus 273 ~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~g---------y~~l~avv~~i~iivAnvPeGL~~tvTv~Ltlt 343 (1019)
T KOG0203|consen 273 LEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALILG---------YEWLRAVVFLIGIIVANVPEGLLATVTVCLTLT 343 (1019)
T ss_pred CCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhhc---------chhHHHhhhhheeEEecCcCCccceehhhHHHH
Confidence 78889999999999999999888888887776654321 134455566888999999999999999999999
Q ss_pred HHHHHhcCceeecchhhhhcccccEEEecCCCccCCCccEEEEEEEecccccCcceeeeeeeccccCCCCccccCCCccc
Q 008694 319 TKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQL 398 (557)
Q Consensus 319 ~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (557)
+++|+++++++|+..+.|.||..++||+|||||||+|+|+|.++|.++.+...+-. .+..+.
T Consensus 344 akrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~---------~~~~~~--------- 405 (1019)
T KOG0203|consen 344 AKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTT---------EDQSGQ--------- 405 (1019)
T ss_pred HHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeech---------hhhhcc---------
Confidence 99999999999999999999999999999999999999999999998875432211 000000
Q ss_pred cCCCChHHHHHHHHHhcccccceeeccCCC---CcceecCChhHHHHHHHHHHcCCCCCCCCchhhhhhhhhhccccccc
Q 008694 399 EFPAQLPCLLHIARCSALCNESVLQYNPDK---GNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNH 475 (557)
Q Consensus 399 ~~~~~~~~~~~~~~~~~lC~~~~~~~~~~~---~~~~~~~~p~E~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (557)
......+....+.+|..+||.+.+...+.+ ......|++.|.||++|+...-... .
T Consensus 406 ~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~---------------------~ 464 (1019)
T KOG0203|consen 406 SFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSV---------------------M 464 (1019)
T ss_pred cccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchH---------------------H
Confidence 011123456778899999999987643322 2234459999999999986532210 1
Q ss_pred ccccccceeeeecCCccCceEEEEEeeCC----eEEEEEeCCcHHHHhhcccccccCCCeeecCCHHHHHHHHHHHHHHH
Q 008694 476 HWEIEFKKVSILEFSRDRKMMSVLCSHKQ----MCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNRLD 551 (557)
Q Consensus 476 ~~~~~~~il~~~~F~s~rk~mSVvv~~~~----~~~l~~KGa~e~il~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 551 (557)
..++.++.+..+||||.+|..-.+-+.++ +..+.+|||||.++++|+.+.. +|+..|+|++.++.+++++..++
T Consensus 465 ~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i--~g~e~pld~~~~~~f~~ay~~lg 542 (1019)
T KOG0203|consen 465 ELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILI--NGEEKPLDEKLKEAFQEAYLELG 542 (1019)
T ss_pred HHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceee--cCCCCCcCHHHHHHHHHHHHHhh
Confidence 22677888999999999998777766544 7889999999999999999987 69999999999999999999988
Q ss_pred hhh
Q 008694 552 NSI 554 (557)
Q Consensus 552 ~~g 554 (557)
..|
T Consensus 543 ~~G 545 (1019)
T KOG0203|consen 543 GLG 545 (1019)
T ss_pred hcc
Confidence 776
No 17
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=2.6e-59 Score=515.50 Aligned_cols=487 Identities=22% Similarity=0.243 Sum_probs=371.2
Q ss_pred HHhhcCCCCCCCcccchH---HHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCccccchhhHHHHHHHHHHHHHHHHHHH
Q 008694 32 HVRIYGKNVLPQEKRTAF---WKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITE 108 (557)
Q Consensus 32 r~~~~G~N~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 108 (557)
+...|..|.+.+.||+.+ ++.+++||++.-++++++.++++++. +. ....|...+.+++++. .
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~----~~~~~~~~~pl~~vl~---------~ 93 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LS----PFNPYTTLVPLLFVLG---------I 93 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-cc----ccCccceeeceeeeeh---------H
Confidence 556999999999999754 56777788887777777777776665 22 1222222222222221 2
Q ss_pred HHHHHHHHHHHhcCCC------eEEEEeCCe-EEEeeCCCcCCCcEEEEcCCCccccceEEeeec--CCeeEEecccccC
Q 008694 109 TNAEKALEELRAYQAD------IATVLRNGC-FSILPAAELVPGDIVEVNVGCKIPADMRMIEML--SNQLRVDQAILTG 179 (557)
Q Consensus 109 ~~~~~~~~~l~~~~~~------~~~v~r~g~-~~~i~~~~l~~GDIv~l~~g~~vPaD~ill~~~--~g~~~vdes~ltG 179 (557)
...|+.++|++|++.| ++.|.|++. +++..|++|+|||+|++..++.+|||.++|.++ +|-|+|++++|||
T Consensus 94 t~iKd~~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDG 173 (1151)
T KOG0206|consen 94 TAIKDAIEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDG 173 (1151)
T ss_pred HHHHHHHhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCC
Confidence 3478999999988777 578888543 899999999999999999999999999999876 5779999999999
Q ss_pred Ccceeecccccccc----------------------------------cccccCCCCceEEeeceEee-ceEEEEEEEec
Q 008694 180 ESCSVEKELDSIIA----------------------------------TNAVYQDKTNILFSGTVVVA-GRARAVVVGVG 224 (557)
Q Consensus 180 es~~~~k~~~~~~~----------------------------------~~~~~~~~~n~l~~Gs~v~~-g~~~~~V~~tG 224 (557)
|++.+.|....... ....+..++|++++|+++++ .++.|+|++||
T Consensus 174 EtnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG 253 (1151)
T KOG0206|consen 174 ETNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTG 253 (1151)
T ss_pred ccccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcC
Confidence 99998886532100 00116667899999999998 58999999999
Q ss_pred ccchhHHHHHHhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC-CC---Cc------chhhHHHHHHH
Q 008694 225 ANTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDP-SH---GG------FLRGAIHYFKI 294 (557)
Q Consensus 225 ~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~------~~~~~~~~~~~ 294 (557)
++|+.++ +...++.+++++++.++.....++.++++++++..+....+.... .. .. ........|..
T Consensus 254 ~dtK~~~---n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t 330 (1151)
T KOG0206|consen 254 HDTKLMQ---NSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLT 330 (1151)
T ss_pred CcchHHH---hcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHH
Confidence 9996644 445578899999999999988888888888888776655443310 00 00 11133456777
Q ss_pred HHHHHHHhcCCchHHHHHHHHHHHHHHHH----------hcCceeecchhhhhcccccEEEecCCCccCCCccEEEEEEE
Q 008694 295 AVALAVAAIPEGLPAVVTTCLALGTKRMA----------RLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICV 364 (557)
Q Consensus 295 ~i~~l~~~iP~~l~~~~~~~~~~~~~~~~----------~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~~ 364 (557)
++.++..++|++|++.+++...+++..+. ...+.+|+.+..|+||+|++|++|||||||+|.|+|++|.+
T Consensus 331 ~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi 410 (1151)
T KOG0206|consen 331 FIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSI 410 (1151)
T ss_pred HHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccc
Confidence 88899999999999999999999987763 35788999999999999999999999999999999999999
Q ss_pred ecccccCcceeeeeeecccc-------CCCCccccCCCccc---cCCCChHHHHHHHHHhcccccceeeccCCC-Cccee
Q 008694 365 VHSVQQGPIIAEYGVTGTTY-------APEGVVFDSSGIQL---EFPAQLPCLLHIARCSALCNESVLQYNPDK-GNYEK 433 (557)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~lC~~~~~~~~~~~-~~~~~ 433 (557)
++..+............... .+++...+...... ..........+|++++++||++.+..+++. ...|.
T Consensus 411 ~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~ 490 (1151)
T KOG0206|consen 411 NGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYE 490 (1151)
T ss_pred cCcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeee
Confidence 88765543221100000000 01111111111100 001234566789999999999999874443 55677
Q ss_pred cCChhHHHHHHHHHHcCCCCCCCCchhhhhhhhhhcccccccccccccceeeeecCCccCceEEEEEeeCC-eEEEEEeC
Q 008694 434 IGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHKQ-MCVMFSKG 512 (557)
Q Consensus 434 ~~~p~E~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rk~mSVvv~~~~-~~~l~~KG 512 (557)
+.||||.|+++.|++.|+.+..|.++.+.+...++ .+.|++|+++||||.|||||||||.++ ++.|||||
T Consensus 491 A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~---------~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKG 561 (1151)
T KOG0206|consen 491 AESPDEAALVEAARELGFVFLGRTPDSVTIRELGV---------EETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKG 561 (1151)
T ss_pred cCCCcHHHHHHHHHhcCceeeeccCceEEEecccc---------ceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcC
Confidence 89999999999999999999999999998874442 478999999999999999999999988 99999999
Q ss_pred CcHHHHhhcccccccCCCeeecCCHHHHHHHHHHHHHHHhhhc
Q 008694 513 APESVLSRCTNILCNDNGFIVPMTANIRAELESRLNRLDNSIL 555 (557)
Q Consensus 513 a~e~il~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gl 555 (557)
||++|+++++.. .++.+++.++++++||.+||
T Consensus 562 ADsvI~erL~~~-----------~~~~~e~T~~Hl~~yA~eGL 593 (1151)
T KOG0206|consen 562 ADSVIFERLSKN-----------GEKLREKTQEHLEEYATEGL 593 (1151)
T ss_pred cchhhHhhhhhc-----------chHHHHHHHHHHHHHHhhhh
Confidence 999999999962 46788999999999999998
No 18
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-59 Score=473.82 Aligned_cols=454 Identities=21% Similarity=0.248 Sum_probs=335.0
Q ss_pred HHHhhcCCCCCCCcccchH---HHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCccccchhhHHHHHHHHHHHHHHHHHH
Q 008694 31 RHVRIYGKNVLPQEKRTAF---WKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVIT 107 (557)
Q Consensus 31 ~r~~~~G~N~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 107 (557)
.+.++|.+|.+...||+.+ +..+++||+.+++.++++.++-.++..+-.+ ....|+.++..++.+.+
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig--~l~ty~~pl~fvl~itl-------- 143 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIG--YLSTYWGPLGFVLTITL-------- 143 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheec--chhhhhHHHHHHHHHHH--------
Confidence 5677899999998777533 6777888888888887777766655543322 22334444444444333
Q ss_pred HHHHHHHHHHHHhcCCC------eEEEE-eCCeEEEeeCCCcCCCcEEEEcCCCccccceEEeeec--CCeeEEeccccc
Q 008694 108 ETNAEKALEELRAYQAD------IATVL-RNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEML--SNQLRVDQAILT 178 (557)
Q Consensus 108 ~~~~~~~~~~l~~~~~~------~~~v~-r~g~~~~i~~~~l~~GDIv~l~~g~~vPaD~ill~~~--~g~~~vdes~lt 178 (557)
.+++.+++++++.+ +..++ |+|.... ++++|++||+|++.++++||||+++|+++ +|.|+|.+..||
T Consensus 144 ---~keavdd~~r~~rd~~~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLD 219 (1051)
T KOG0210|consen 144 ---IKEAVDDLKRRRRDRELNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLD 219 (1051)
T ss_pred ---HHHHHHHHHHHHhhhhhhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccC
Confidence 45555555544333 33444 6665554 99999999999999999999999999987 788999999999
Q ss_pred CCcceeecccccccc----------------------------------cccccCCCCceEEeeceEeeceEEEEEEEec
Q 008694 179 GESCSVEKELDSIIA----------------------------------TNAVYQDKTNILFSGTVVVAGRARAVVVGVG 224 (557)
Q Consensus 179 Ges~~~~k~~~~~~~----------------------------------~~~~~~~~~n~l~~Gs~v~~g~~~~~V~~tG 224 (557)
||++.+-|-|.+..+ .+....+-+|.+|++|.+.+|.++|+|+|||
T Consensus 220 GETDWKLrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG 299 (1051)
T KOG0210|consen 220 GETDWKLRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTG 299 (1051)
T ss_pred CcccceeeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEec
Confidence 999988776543210 1123455689999999999999999999999
Q ss_pred ccchhHHHHHHhccc---CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCcchhhHHHHHHHHHHHHHH
Q 008694 225 ANTAMGSIRDSMLQT---EDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVA 301 (557)
Q Consensus 225 ~~T~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~ 301 (557)
.+| ++++++ +.|...++..+|.+.+.++...++++++....... . ..|...++.++.++..
T Consensus 300 ~dt------RsvMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~--~--------~~wyi~~~RfllLFS~ 363 (1051)
T KOG0210|consen 300 RDT------RSVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGF--G--------SDWYIYIIRFLLLFSS 363 (1051)
T ss_pred ccH------HHHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcC--C--------CchHHHHHHHHHHHhh
Confidence 999 444444 34445567778877777776666666555443221 1 1344567788889999
Q ss_pred hcCCchHHHHHHHHHHHHHHHHhc----CceeecchhhhhcccccEEEecCCCccCCCccEEEEEEEecccccCcceeee
Q 008694 302 AIPEGLPAVVTTCLALGTKRMARL----NAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEY 377 (557)
Q Consensus 302 ~iP~~l~~~~~~~~~~~~~~~~~~----~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~ 377 (557)
++|++|-+.+++++..-.+.+..+ |.++|+++..|+||+|.++.+|||||||+|+|.++++-.+--.+..+..++.
T Consensus 364 IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV 443 (1051)
T KOG0210|consen 364 IIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEV 443 (1051)
T ss_pred hceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHH
Confidence 999999999999999998888765 6889999999999999999999999999999999999876544433322221
Q ss_pred eee-ccccCCCCccccCCCccccCCCChHHHHHHHHHhcccccceeeccCCCCcceecCChhHHHHHHHHHHcCCCCCCC
Q 008694 378 GVT-GTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDS 456 (557)
Q Consensus 378 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lC~~~~~~~~~~~~~~~~~~~p~E~all~~a~~~g~~~~~~ 456 (557)
+.- ..-+.|. .............+....+.....++|+||+++|..+.++..-|++.||||+|+++|....|..+.+|
T Consensus 444 ~~~i~s~~~~~-~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~R 522 (1051)
T KOG0210|consen 444 SQHIQSLYTPG-RNKGKGALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKR 522 (1051)
T ss_pred HHHHHHhhCCC-cccccccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeec
Confidence 100 0011110 00000111111123344567788899999999999887777888999999999999999999999999
Q ss_pred CchhhhhhhhhhcccccccccccccceeeeecCCccCceEEEEEeeC--CeEEEEEeCCcHHHHhhccc
Q 008694 457 MPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHK--QMCVMFSKGAPESVLSRCTN 523 (557)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rk~mSVvv~~~--~~~~l~~KGa~e~il~~c~~ 523 (557)
+...+.+..+... ...|+||++|||+|+.|||.+|||++ +++.+|.||||.+|...-+.
T Consensus 523 d~~~itL~~~~~~--------~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~ 583 (1051)
T KOG0210|consen 523 DRHAITLRVPLDD--------ELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQY 583 (1051)
T ss_pred ccceEEEecCCCc--------ceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccccc
Confidence 9999998877543 57899999999999999999999998 49999999999988766554
No 19
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.1e-55 Score=459.85 Aligned_cols=480 Identities=22% Similarity=0.290 Sum_probs=345.5
Q ss_pred CCCCCHHHHHHHHhhcCCCCCCCcccchHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCccccchhhHHHHHHHHHHH
Q 008694 21 TKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAAN 100 (557)
Q Consensus 21 ~~GL~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (557)
.+||+.+++.+|+..||+|.+..+. ++.++++.++...|+..+.. +++++|... .|++++.+|+++.+++
T Consensus 158 ~~gL~~~~~~~r~~iyG~N~i~l~i-k~i~~iLv~EvL~PfYlFQ~----fSv~lW~~d-----~Y~~YA~cI~iisv~S 227 (1140)
T KOG0208|consen 158 SNGLERQEIIDRRIIYGRNVISLPI-KSISQILVKEVLNPFYLFQA----FSVALWLAD-----SYYYYAFCIVIISVYS 227 (1140)
T ss_pred cCCccHHHHHhHHhhcCCceeeeec-ccHHHHHHHhccchHHHHHh----HHhhhhhcc-----cchhhhhHHHHHHHHH
Confidence 5799999999999999999999744 45899999998888766554 445555443 3677788888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEEEeCCeEEEeeCCCcCCCcEEEEcC-CCccccceEEeeecCCeeEEecccccC
Q 008694 101 AAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNV-GCKIPADMRMIEMLSNQLRVDQAILTG 179 (557)
Q Consensus 101 ~~i~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDIv~l~~-g~~vPaD~ill~~~~g~~~vdes~ltG 179 (557)
..+..+..++..+.++++-+.. ..++|+|+|.|++|.++|||||||+.+.+ +-..|||++++ +|+|.||||+|||
T Consensus 228 i~~sv~e~r~qs~rlr~mv~~~-~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li---~g~civNEsmLTG 303 (1140)
T KOG0208|consen 228 IVLSVYETRKQSIRLRSMVKFT-CPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLI---SGDCIVNESMLTG 303 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHhcCC-ceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEE---eCcEEeecccccC
Confidence 8998888888888888876654 35899999999999999999999999999 89999999999 4999999999999
Q ss_pred Ccceeecccccccc------cccccCCCCceEEeeceEee------ceEEEEEEEecccchhHHHHHHhcccCCCCChhH
Q 008694 180 ESCSVEKELDSIIA------TNAVYQDKTNILFSGTVVVA------GRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLK 247 (557)
Q Consensus 180 es~~~~k~~~~~~~------~~~~~~~~~n~l~~Gs~v~~------g~~~~~V~~tG~~T~~~~~~~~~~~~~~~~~~~~ 247 (557)
||.|+.|.|.+... ......+..|.+|.||.+++ +.+.++|++||..|..|++.++++.++....++-
T Consensus 304 ESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~~fkfy 383 (1140)
T KOG0208|consen 304 ESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPVNFKFY 383 (1140)
T ss_pred CcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCcccHHH
Confidence 99999999875211 11233456799999999985 5799999999999999999999999766555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCc
Q 008694 248 KKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNA 327 (557)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~iP~~l~~~~~~~~~~~~~~~~~~~i 327 (557)
+...++... +.+++++.+++....+.... -..-..+..++.++...+|.+||.++++....+..|+.|+||
T Consensus 384 rds~~fi~~----l~~ia~~gfiy~~i~l~~~g-----~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~I 454 (1140)
T KOG0208|consen 384 RDSFKFILF----LVIIALIGFIYTAIVLNLLG-----VPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGI 454 (1140)
T ss_pred HHHHHHHHH----HHHHHHHHHHHHhHhHHHcC-----CCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCe
Confidence 544443332 22333333322221111000 023345677888999999999999999999999999999999
Q ss_pred eeecchhhhhcccccEEEecCCCccCCCccEEEEEEEeccc-ccCcceeeeeeeccccCCCCccccCCCccccCCCChHH
Q 008694 328 IVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSV-QQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPC 406 (557)
Q Consensus 328 ~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (557)
+|-+++.+...|++|.+|||||||||++.+.+-.+...++. ...+.......... .. ..++..+.....
T Consensus 455 fCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~-----~~-----~~~l~~~~~~~~ 524 (1140)
T KOG0208|consen 455 FCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSL-----QL-----FYKLSLRSSSLP 524 (1140)
T ss_pred EEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhc-----cc-----eeeccccccCCc
Confidence 99999999999999999999999999999999998875542 11111111000000 00 000111111112
Q ss_pred HHHHHHHhcccccceeeccCCCCcceecCChhHHHHHHHHHHcCCCCCCCC--------chhhh--hhhhhhcc-ccccc
Q 008694 407 LLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSM--------PSALN--MLSKHERA-SYCNH 475 (557)
Q Consensus 407 ~~~~~~~~~lC~~~~~~~~~~~~~~~~~~~p~E~all~~a~~~g~~~~~~~--------~~~~~--~~~~~~~~-~~~~~ 475 (557)
...+..+++.||+.....+ ...|+|.|.-|.+.. |+.+.... .+... +..+.... ....+
T Consensus 525 ~~~~~~a~atCHSL~~v~g------~l~GDPLdlkmfe~t---~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~ 595 (1140)
T KOG0208|consen 525 MGNLVAAMATCHSLTLVDG------TLVGDPLDLKMFEST---GWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTE 595 (1140)
T ss_pred hHHHHHHHhhhceeEEeCC------eeccCceeeeeeecc---ceEEEeccccchhhhhhCCccCCEeCCCcccccCCCc
Confidence 4567789999997765421 234777777666543 44442210 00000 11111110 00001
Q ss_pred ccccccceeeeecCCccCceEEEEEeeCC--eEEEEEeCCcHHHHhhcccccccCCCeeecCCHHHHHHHHHHHHHHHhh
Q 008694 476 HWEIEFKKVSILEFSRDRKMMSVLCSHKQ--MCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNRLDNS 553 (557)
Q Consensus 476 ~~~~~~~il~~~~F~s~rk~mSVvv~~~~--~~~l~~KGa~e~il~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 553 (557)
...+.+-+++.+||+|..+||||||+.++ ...+|+|||||.|.+.|++.-.. +..++.++.|+..
T Consensus 596 ~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~tvP-------------~dy~evl~~Yt~~ 662 (1140)
T KOG0208|consen 596 CGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPETVP-------------ADYQEVLKEYTHQ 662 (1140)
T ss_pred CCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcccCC-------------ccHHHHHHHHHhC
Confidence 11236899999999999999999999875 78999999999999999975321 3477888888888
Q ss_pred hc
Q 008694 554 IL 555 (557)
Q Consensus 554 gl 555 (557)
|+
T Consensus 663 Gf 664 (1140)
T KOG0208|consen 663 GF 664 (1140)
T ss_pred Ce
Confidence 85
No 20
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.2e-55 Score=441.26 Aligned_cols=440 Identities=30% Similarity=0.399 Sum_probs=349.2
Q ss_pred hhcCCHHHHHHhhCCCCCCCCCHHHHHHHHhhcCCCCCCCcccchHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCcc
Q 008694 4 AYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGETG 83 (557)
Q Consensus 4 ~~~~~~~~~~~~l~~~~~~GL~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 83 (557)
..+.+++++.+.|.+..+ ||+++|+++|++.||.|++...|.. .+..|+.-|++|+.+..-.+++....+. .+...
T Consensus 18 l~~~p~eeVfeeL~~t~~-GLt~~E~~eRlk~fG~NkleEkken-~~lKFl~Fm~~PlswVMEaAAimA~~La--ng~~~ 93 (942)
T KOG0205|consen 18 LEAIPIEEVFEELLCTRE-GLTSDEVEERLKIFGPNKLEEKKES-KFLKFLGFMWNPLSWVMEAAAIMAIGLA--NGGGR 93 (942)
T ss_pred cccCchhhhHHHHhcCCC-CCchHHHHHHHHhhCchhhhhhhhh-HHHHHHHHHhchHHHHHHHHHHHHHHHh--cCCCC
Confidence 356789999999998864 9999999999999999999975555 4555667788888888888877665543 34344
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeCCeEEEeeCCCcCCCcEEEEcCCCccccceEEe
Q 008694 84 LTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMI 163 (557)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDIv~l~~g~~vPaD~ill 163 (557)
...|.+...|..++++|..+++++|+.+-.....++.....++.|+|||+|.++.++.||||||+.++.|+++|||+++|
T Consensus 94 ~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl 173 (942)
T KOG0205|consen 94 PPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARLL 173 (942)
T ss_pred CcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEecCcccee
Confidence 56899999999999999999999999999999999998888999999999999999999999999999999999999999
Q ss_pred eecCCeeEEecccccCCcceeecccccccccccccCCCCceEEeeceEeeceEEEEEEEecccchhHHHHHHhcccCCCC
Q 008694 164 EMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEV 243 (557)
Q Consensus 164 ~~~~g~~~vdes~ltGes~~~~k~~~~~~~~~~~~~~~~n~l~~Gs~v~~g~~~~~V~~tG~~T~~~~~~~~~~~~~~~~ 243 (557)
+ .+.+.||+|.|||||.|+.|.+++ .+|+||.+.+|++.++|++||..|..|+-++.+.. ....
T Consensus 174 ~--gD~LkiDQSAlTGESLpvtKh~gd-------------~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVds-t~~~ 237 (942)
T KOG0205|consen 174 E--GDPLKIDQSALTGESLPVTKHPGD-------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQV 237 (942)
T ss_pred c--CCccccchhhhcCCccccccCCCC-------------ceecccccccceEEEEEEEeccceeehhhHHhhcC-CCCc
Confidence 8 567999999999999999999984 78999999999999999999999999999988766 5667
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 008694 244 TPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMA 323 (557)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~iP~~l~~~~~~~~~~~~~~~~ 323 (557)
..+++-++.+.++++..++ +++++-+...+ +.+... ++.. ......+++.-+|++||..+++.+.+++.+++
T Consensus 238 GHFqkVLt~IGn~ci~si~-~g~lie~~vmy-~~q~R~---~r~~---i~nLlvllIGgiPiamPtVlsvTMAiGs~rLa 309 (942)
T KOG0205|consen 238 GHFQKVLTGIGNFCICSIA-LGMLIEITVMY-PIQHRL---YRDG---IDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLS 309 (942)
T ss_pred ccHHHHHHhhhhHHHHHHH-HHHHHHHHhhh-hhhhhh---hhhh---hhheheeeecccccccceeeeehhhHHHHHHH
Confidence 7899999988887765333 22222221111 111100 1111 11122344555999999999999999999999
Q ss_pred hcCceeecchhhhhcccccEEEecCCCccCCCccEEEE--E-EEecccccCcceeeeeeeccccCCCCccccCCCccccC
Q 008694 324 RLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAK--I-CVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEF 400 (557)
Q Consensus 324 ~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (557)
++|.+++...++|+|+.+|++|+|||||||.|++++.+ + ++..+
T Consensus 310 qqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~g--------------------------------- 356 (942)
T KOG0205|consen 310 QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKG--------------------------------- 356 (942)
T ss_pred hcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeecC---------------------------------
Confidence 99999999999999999999999999999999999977 2 11111
Q ss_pred CCChHHHHHHHHHhcccccceeeccCCCCcceecCChhHHHHHHHHHHcCCCCCCCCchhhhhhhhhhcccccccccccc
Q 008694 401 PAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIE 480 (557)
Q Consensus 401 ~~~~~~~~~~~~~~~lC~~~~~~~~~~~~~~~~~~~p~E~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (557)
..++-+.+..|. .+... .-+..|.|++...++ |+. .+..
T Consensus 357 --v~~D~~~L~A~r----Asr~e----------n~DAID~A~v~~L~d---------PKe----------------ara~ 395 (942)
T KOG0205|consen 357 --VDKDDVLLTAAR----ASRKE----------NQDAIDAAIVGMLAD---------PKE----------------ARAG 395 (942)
T ss_pred --CChHHHHHHHHH----Hhhhc----------ChhhHHHHHHHhhcC---------HHH----------------HhhC
Confidence 011112222222 22111 137889999864321 111 1567
Q ss_pred cceeeeecCCccCceEEEEEeeCC-eEEEEEeCCcHHHHhhcccccccCCCeeecCCHHHHHHHHHHHHHHHhhhccC
Q 008694 481 FKKVSILEFSRDRKMMSVLCSHKQ-MCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNRLDNSILYS 557 (557)
Q Consensus 481 ~~il~~~~F~s~rk~mSVvv~~~~-~~~l~~KGa~e~il~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gl~~ 557 (557)
|+.++-+|||+..||....+.+++ +-+-.+||||+.|++.|.. +++.++.+.+.+++|+++||-|
T Consensus 396 ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~------------~~~i~~~vh~~id~~AeRGlRS 461 (942)
T KOG0205|consen 396 IKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNE------------DHDIPERVHSIIDKFAERGLRS 461 (942)
T ss_pred ceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhc------------cCcchHHHHHHHHHHHHhcchh
Confidence 899999999999999999999877 6777799999999999994 4567788999999999999865
No 21
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=1.2e-50 Score=436.16 Aligned_cols=390 Identities=21% Similarity=0.212 Sum_probs=303.0
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHhcCC-----ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-eEE
Q 008694 54 LKQFDDLLVKILIAAAVISFFLALINGE-----TGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQAD-IAT 127 (557)
Q Consensus 54 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~-~~~ 127 (557)
..+|++++.++++++++++++++++... .....|...+++++.+++..+++.++++|+++.++.+++..++ +++
T Consensus 28 ~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~ 107 (679)
T PRK01122 28 RVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFAR 107 (679)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 3478899999999999999998765321 1123455566677777778888889999999999999998886 699
Q ss_pred EEeCCe-EEEeeCCCcCCCcEEEEcCCCccccceEEeeecCCeeEEecccccCCcceeecccccccccccccCCCCceEE
Q 008694 128 VLRNGC-FSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILF 206 (557)
Q Consensus 128 v~r~g~-~~~i~~~~l~~GDIv~l~~g~~vPaD~ill~~~~g~~~vdes~ltGes~~~~k~~~~~~~~~~~~~~~~n~l~ 206 (557)
|+|+|+ +++|++++|++||+|.+++||+|||||++++ |.+.||||++||||.|+.|.++. +. +.+|
T Consensus 108 vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vie---G~a~VDESaLTGES~PV~K~~G~---------~~-~~V~ 174 (679)
T PRK01122 108 KLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIE---GVASVDESAITGESAPVIRESGG---------DF-SSVT 174 (679)
T ss_pred EEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEE---ccEEEEcccccCCCCceEeCCCC---------cc-CeEE
Confidence 999988 8999999999999999999999999999996 78999999999999999999873 12 2399
Q ss_pred eeceEeeceEEEEEEEecccchhHHHHHHhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCcchh
Q 008694 207 SGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLR 286 (557)
Q Consensus 207 ~Gs~v~~g~~~~~V~~tG~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (557)
+||.+.+|++.++|+++|.+|.+|++.+.+..++.+++|++...+.+...+..+.++++++++.+.. +..
T Consensus 175 aGT~v~~G~~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~--~~g-------- 244 (679)
T PRK01122 175 GGTRVLSDWIVIRITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAA--YSG-------- 244 (679)
T ss_pred eceEEEeeeEEEEEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHH--HhC--------
Confidence 9999999999999999999999999999998888889999988777766655444433333332221 111
Q ss_pred hHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCceeecchhhhhcccccEEEecCCCccCCCccEEEEEEEec
Q 008694 287 GAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVH 366 (557)
Q Consensus 287 ~~~~~~~~~i~~l~~~iP~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~ 366 (557)
....+..++++++++||++++...+.....++.++.++|+++|+..++|.||.+|++|||||||||+|+|.+.+++..+
T Consensus 245 -~~~~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~ 323 (679)
T PRK01122 245 -GALSITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVP 323 (679)
T ss_pred -chHHHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCC
Confidence 0125677889999999999999999999999999999999999999999999999999999999999999999876322
Q ss_pred ccccCcceeeeeeeccccCCCCccccCCCccccCCCChHHHHHHHHHhcccccceeeccCCCCcceecCChhHHHHHHHH
Q 008694 367 SVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLA 446 (557)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lC~~~~~~~~~~~~~~~~~~~p~E~all~~a 446 (557)
+. ..+ +++.+.++|+... ..|...|+++++
T Consensus 324 ~~----------------------------------~~~---~ll~~a~~~s~~s-------------~hP~~~AIv~~a 353 (679)
T PRK01122 324 GV----------------------------------TEE---ELADAAQLSSLAD-------------ETPEGRSIVVLA 353 (679)
T ss_pred CC----------------------------------CHH---HHHHHHHHhcCCC-------------CCchHHHHHHHH
Confidence 10 011 2334445554321 246778999998
Q ss_pred HH-cCCCCCCCCchhhhhhhhhhcccccccccccccceeeeecCCccCceEEEEEeeCCeEEEEEeCCcHHHHhhccccc
Q 008694 447 EK-VGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNIL 525 (557)
Q Consensus 447 ~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rk~mSVvv~~~~~~~l~~KGa~e~il~~c~~~~ 525 (557)
++ .+.... +..+...+.+||++.+|+|++.+. + ..|.|||+|.|++.|+..
T Consensus 354 ~~~~~~~~~-----------------------~~~~~~~~~~pF~s~~~~~gv~~~--g--~~~~kGa~e~il~~~~~~- 405 (679)
T PRK01122 354 KQRFNLRER-----------------------DLQSLHATFVPFSAQTRMSGVDLD--G--REIRKGAVDAIRRYVESN- 405 (679)
T ss_pred HhhcCCCch-----------------------hhccccceeEeecCcCceEEEEEC--C--EEEEECCHHHHHHHHHhc-
Confidence 76 232110 112455677899999998988653 2 478999999999999642
Q ss_pred ccCCCeeecCCHHHHHHHHHHHHHHHhhhc
Q 008694 526 CNDNGFIVPMTANIRAELESRLNRLDNSIL 555 (557)
Q Consensus 526 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~gl 555 (557)
|... .+++.+.+++++++|+
T Consensus 406 ----g~~~------~~~~~~~~~~~a~~G~ 425 (679)
T PRK01122 406 ----GGHF------PAELDAAVDEVARKGG 425 (679)
T ss_pred ----CCcC------hHHHHHHHHHHHhCCC
Confidence 2211 1345666677777773
No 22
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=1.1e-49 Score=428.31 Aligned_cols=365 Identities=21% Similarity=0.255 Sum_probs=275.1
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHhcCCccc--cchhhHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHhcCCC-eEE
Q 008694 55 KQFDDLLVKILIAAAVISFFLALINGETGL--TAFLEPSVILLILAANAAVGVIT----ETNAEKALEELRAYQAD-IAT 127 (557)
Q Consensus 55 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~----~~~~~~~~~~l~~~~~~-~~~ 127 (557)
.++++|+.+++++++++++++..+....+. ...++++.++++++++.+++.++ ++|+++.++.+++..++ +++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 356799999999999999988765331111 11233444444555555555555 79999999999999886 675
Q ss_pred -EEeCCeEEEeeCCCcCCCcEEEEcCCCccccceEEeeecCCeeEEecccccCCcceeecccccccccccccCCCCceEE
Q 008694 128 -VLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILF 206 (557)
Q Consensus 128 -v~r~g~~~~i~~~~l~~GDIv~l~~g~~vPaD~ill~~~~g~~~vdes~ltGes~~~~k~~~~~~~~~~~~~~~~n~l~ 206 (557)
|.|||++++|++++|+|||+|.+++||+|||||++++ |.+.||||+|||||.|+.|.++. ++++ +|
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vie---G~~~VDESaLTGES~PV~K~~g~---------d~~~-V~ 174 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIK---GLATVDESAITGESAPVIKESGG---------DFDN-VI 174 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEE---cceEEecchhcCCCCceeccCCC---------ccCe-ee
Confidence 6799999999999999999999999999999999996 78899999999999999999872 2234 99
Q ss_pred eeceEeeceEEEEEEEecccchhHHHHHHhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCcchh
Q 008694 207 SGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLR 286 (557)
Q Consensus 207 ~Gs~v~~g~~~~~V~~tG~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (557)
+||.+.+|++.++|+++|.+|.+|++.+.+..++.+++|++.....+...+.+ +++++++++.....+ .
T Consensus 175 aGT~v~~G~~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~i--i~l~~~~~~~~~~~~---------~ 243 (673)
T PRK14010 175 GGTSVASDWLEVEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTI--IFLVVILTMYPLAKF---------L 243 (673)
T ss_pred cCceeecceEEEEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhH--HHHHHHHHHHHHHhh---------c
Confidence 99999999999999999999999999999988888899998765554333222 112222221111101 0
Q ss_pred hHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCceeecchhhhhcccccEEEecCCCccCCCccEEEEEEEec
Q 008694 287 GAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVH 366 (557)
Q Consensus 287 ~~~~~~~~~i~~l~~~iP~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~ 366 (557)
.+...+...++++++++|++|+..++++...++.+|+++|+++|+..++|.||.+|++|||||||||+|++.+.++...+
T Consensus 244 ~~~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~ 323 (673)
T PRK14010 244 NFNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVK 323 (673)
T ss_pred cHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCC
Confidence 12234566778888899999999999999999999999999999999999999999999999999999887776643211
Q ss_pred ccccCcceeeeeeeccccCCCCccccCCCccccCCCChHHHHHHHHHhcccccceeeccCCCCcceecCChhHHHHHHHH
Q 008694 367 SVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLA 446 (557)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lC~~~~~~~~~~~~~~~~~~~p~E~all~~a 446 (557)
+ . ...+++...++|+... .+|.+.|+++++
T Consensus 324 ~----------------------------------~---~~~~ll~~a~~~~~~s-------------~~P~~~AIv~~a 353 (673)
T PRK14010 324 S----------------------------------S---SFERLVKAAYESSIAD-------------DTPEGRSIVKLA 353 (673)
T ss_pred C----------------------------------c---cHHHHHHHHHHhcCCC-------------CChHHHHHHHHH
Confidence 0 0 0112334445665321 389999999999
Q ss_pred HHcCCCCCCCCchhhhhhhhhhcccccccccccccceeeeecCCccCceEEEEEeeCCeEEEEEeCCcHHHHhhccc
Q 008694 447 EKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTN 523 (557)
Q Consensus 447 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rk~mSVvv~~~~~~~l~~KGa~e~il~~c~~ 523 (557)
++.|+... ....+.+||++++|+|++.++ +. .+.|||++.++++|+.
T Consensus 354 ~~~~~~~~--------------------------~~~~~~~pF~~~~k~~gv~~~--g~--~i~kGa~~~il~~~~~ 400 (673)
T PRK14010 354 YKQHIDLP--------------------------QEVGEYIPFTAETRMSGVKFT--TR--EVYKGAPNSMVKRVKE 400 (673)
T ss_pred HHcCCCch--------------------------hhhcceeccccccceeEEEEC--CE--EEEECCHHHHHHHhhh
Confidence 87665310 001123799999999999864 32 4559999999999985
No 23
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=2.9e-49 Score=424.54 Aligned_cols=391 Identities=20% Similarity=0.267 Sum_probs=295.8
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHhcC-Ccc--c-cchhh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-e
Q 008694 54 LKQFDDLLVKILIAAAVISFFLALING-ETG--L-TAFLE---PSVILLILAANAAVGVITETNAEKALEELRAYQAD-I 125 (557)
Q Consensus 54 ~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~--~-~~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~-~ 125 (557)
..||.++..+++++++++++++.+.+. ... . ..|+. .+++++.+++..+++.++++|+++.++++++..++ .
T Consensus 27 ~~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~ 106 (675)
T TIGR01497 27 KAQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTF 106 (675)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCce
Confidence 346889999999999999999876532 111 1 12333 34455556778888889999999999999998877 4
Q ss_pred EEEEe-CCeEEEeeCCCcCCCcEEEEcCCCccccceEEeeecCCeeEEecccccCCcceeecccccccccccccCCCCce
Q 008694 126 ATVLR-NGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNI 204 (557)
Q Consensus 126 ~~v~r-~g~~~~i~~~~l~~GDIv~l~~g~~vPaD~ill~~~~g~~~vdes~ltGes~~~~k~~~~~~~~~~~~~~~~n~ 204 (557)
++|+| ||++++|++++|++||+|.+++||+|||||++++ |.+.||||++||||.|+.|.+++. .+.
T Consensus 107 a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vie---G~~~VDESaLTGES~PV~K~~g~~----------~~~ 173 (675)
T TIGR01497 107 AKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIE---GVASVDESAITGESAPVIKESGGD----------FAS 173 (675)
T ss_pred EEEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEE---ccEEEEcccccCCCCceeecCCCC----------cce
Confidence 88885 8999999999999999999999999999999996 789999999999999999998741 113
Q ss_pred EEeeceEeeceEEEEEEEecccchhHHHHHHhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCcc
Q 008694 205 LFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGF 284 (557)
Q Consensus 205 l~~Gs~v~~g~~~~~V~~tG~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (557)
+|+||.+.+|++.++|+++|.+|.+|++.+.+..++.+++|++...+.+..++.++.+++++..+.+.. +.
T Consensus 174 V~aGT~v~~G~~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~~~~~~~--~~------- 244 (675)
T TIGR01497 174 VTGGTRILSDWLVVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTATLWPFAA--YG------- 244 (675)
T ss_pred eecCcEEEeeEEEEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hc-------
Confidence 999999999999999999999999999999998888889999988777766555444333333222111 11
Q ss_pred hhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCceeecchhhhhcccccEEEecCCCccCCCccEEEEEEE
Q 008694 285 LRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICV 364 (557)
Q Consensus 285 ~~~~~~~~~~~i~~l~~~iP~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~~ 364 (557)
.....+...+++++++||++++...+.....++.++.++|+++|+..++|.||.+|++|||||||||+|+|++.+++.
T Consensus 245 --~~~~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~ 322 (675)
T TIGR01497 245 --GNAISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIP 322 (675)
T ss_pred --ChhHHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEe
Confidence 111245667889999999988877777777899999999999999999999999999999999999999999999764
Q ss_pred ecccccCcceeeeeeeccccCCCCccccCCCccccCCCChHHHHHHHHHhcccccceeeccCCCCcceecCChhHHHHHH
Q 008694 365 VHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRV 444 (557)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lC~~~~~~~~~~~~~~~~~~~p~E~all~ 444 (557)
.++. .. .+++...++|+... ..|.+.|+++
T Consensus 323 ~~~~----------------------------------~~---~~ll~~aa~~~~~s-------------~hP~a~Aiv~ 352 (675)
T TIGR01497 323 AQGV----------------------------------DE---KTLADAAQLASLAD-------------DTPEGKSIVI 352 (675)
T ss_pred cCCC----------------------------------cH---HHHHHHHHHhcCCC-------------CCcHHHHHHH
Confidence 2210 01 12334445554321 3588999999
Q ss_pred HHHHcCCCCCCCCchhhhhhhhhhcccccccccccccceeeeecCCccCceEEEEEeeCCeEEEEEeCCcHHHHhhcccc
Q 008694 445 LAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNI 524 (557)
Q Consensus 445 ~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rk~mSVvv~~~~~~~l~~KGa~e~il~~c~~~ 524 (557)
+|++.|.... ...+...+..||++.+|+|++.+.+ + ..|.|||+|.+++.|...
T Consensus 353 ~a~~~~~~~~-----------------------~~~~~~~~~~pf~~~~~~sg~~~~~-g--~~~~kGa~e~i~~~~~~~ 406 (675)
T TIGR01497 353 LAKQLGIRED-----------------------DVQSLHATFVEFTAQTRMSGINLDN-G--RMIRKGAVDAIKRHVEAN 406 (675)
T ss_pred HHHHcCCCcc-----------------------ccccccceEEEEcCCCcEEEEEEeC-C--eEEEECCHHHHHHHHHhc
Confidence 9988665321 0122345678999998888776542 2 478999999999988631
Q ss_pred cccCCCeeecCCHHHHHHHHHHHHHHHhhhc
Q 008694 525 LCNDNGFIVPMTANIRAELESRLNRLDNSIL 555 (557)
Q Consensus 525 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gl 555 (557)
|... + +.+.+.+++++++|+
T Consensus 407 -----g~~~--~----~~~~~~~~~~a~~G~ 426 (675)
T TIGR01497 407 -----GGHI--P----TDLDQAVDQVARQGG 426 (675)
T ss_pred -----CCCC--c----HHHHHHHHHHHhCCC
Confidence 2111 1 234555666666663
No 24
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=1.7e-45 Score=394.51 Aligned_cols=307 Identities=38% Similarity=0.503 Sum_probs=262.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh--cCCCeEEEEeCCeEEEeeCCCcCCCcEEEEcCCCccccceEEeeecCCeeEEe
Q 008694 96 ILAANAAVGVITETNAEKALEELRA--YQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVD 173 (557)
Q Consensus 96 ~~~~~~~i~~~~~~~~~~~~~~l~~--~~~~~~~v~r~g~~~~i~~~~l~~GDIv~l~~g~~vPaD~ill~~~~g~~~vd 173 (557)
+.+++.+++.++++++++..+.+.+ ..+.+++|+|+| ++.|++++|+|||+|.+++||+|||||+|++ |.+.||
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~---g~~~vd 80 (499)
T TIGR01494 5 LVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLS---GSCFVD 80 (499)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEE---ccEEEE
Confidence 4455667888899999999999988 778899999999 9999999999999999999999999999996 799999
Q ss_pred cccccCCcceeecccccccccccccCCCCceEEeeceEeeceEEEEEEEecccchhHHHHHHhcccCCCCChhHHHHHHH
Q 008694 174 QAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLDEF 253 (557)
Q Consensus 174 es~ltGes~~~~k~~~~~~~~~~~~~~~~n~l~~Gs~v~~g~~~~~V~~tG~~T~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (557)
||+||||+.|+.|.++ +.+++|+.+.+|++.+.|..+|.+|..+++...+......++++++..+++
T Consensus 81 es~LTGEs~pv~k~~g-------------~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~ 147 (499)
T TIGR01494 81 ESNLTGESVPVLKTAG-------------DAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRL 147 (499)
T ss_pred cccccCCCCCeeeccC-------------CccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHH
Confidence 9999999999999986 478999999999999999999999999999998877777688999999999
Q ss_pred H-HHHHHHHHHHHHHHHHHHhhcccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCceeecc
Q 008694 254 G-TFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSL 332 (557)
Q Consensus 254 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~iP~~l~~~~~~~~~~~~~~~~~~~i~~~~~ 332 (557)
. .+++++.++++++.++.+...+.... .+...+..++++++++||++|+++++++...+..+++++|+++|++
T Consensus 148 ~~~~~~~~~~~la~~~~~~~~~~~~~~~------~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~ 221 (499)
T TIGR01494 148 SDIIFILFVLLIALAVFLFWAIGLWDPN------SIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSL 221 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccc------cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEech
Confidence 8 67777777777766665543221100 2456788899999999999999999999999999999999999999
Q ss_pred hhhhhcccccEEEecCCCccCCCccEEEEEEEecccccCcceeeeeeeccccCCCCccccCCCccccCCCChHHHHHHHH
Q 008694 333 PSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIAR 412 (557)
Q Consensus 333 ~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (557)
+++|+||+++++|||||||||+|+|+|.+++..+.
T Consensus 222 ~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~--------------------------------------------- 256 (499)
T TIGR01494 222 NALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG--------------------------------------------- 256 (499)
T ss_pred hhhhhccCCcEEEeeCCCccccCceEEEEEEecCC---------------------------------------------
Confidence 99999999999999999999999999999864220
Q ss_pred HhcccccceeeccCCCCcceecCChhHHHHHHHHHHcCCCCCCCCchhhhhhhhhhcccccccccccccceeeeecCCcc
Q 008694 413 CSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRD 492 (557)
Q Consensus 413 ~~~lC~~~~~~~~~~~~~~~~~~~p~E~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~ 492 (557)
.+..++|.|.|++++++.. .+...||++.
T Consensus 257 ------------------~~~s~hp~~~ai~~~~~~~---------------------------------~~~~~~f~~~ 285 (499)
T TIGR01494 257 ------------------EYLSGHPDERALVKSAKWK---------------------------------ILNVFEFSSV 285 (499)
T ss_pred ------------------CcCCCChHHHHHHHHhhhc---------------------------------CcceeccCCC
Confidence 0123689999999887531 1235799999
Q ss_pred CceEEEEEeeCCeEEEEEeCCcHHHHhhccc
Q 008694 493 RKMMSVLCSHKQMCVMFSKGAPESVLSRCTN 523 (557)
Q Consensus 493 rk~mSVvv~~~~~~~l~~KGa~e~il~~c~~ 523 (557)
+|+|+++++.+++ .|+||+++.|+++|.+
T Consensus 286 ~~~~~~~~~~~~~--~~~~G~~~~i~~~~~~ 314 (499)
T TIGR01494 286 RKRMSVIVRGPDG--TYVKGAPEFVLSRVKD 314 (499)
T ss_pred CceEEEEEecCCc--EEEeCCHHHHHHhhHH
Confidence 9999999997544 4799999999998853
No 25
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=2.9e-44 Score=388.60 Aligned_cols=253 Identities=26% Similarity=0.349 Sum_probs=234.2
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeCC-eEEEeeCCCcCCCcEEEEcCCCccccceEEee
Q 008694 86 AFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNG-CFSILPAAELVPGDIVEVNVGCKIPADMRMIE 164 (557)
Q Consensus 86 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~v~r~g-~~~~i~~~~l~~GDIv~l~~g~~vPaD~ill~ 164 (557)
.|..+..++++++++.+++.++++++++.++++.+..+..++|+|+| +++++++++|+|||+|.+++||.|||||+|++
T Consensus 17 ~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi~ 96 (556)
T TIGR01525 17 LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVIS 96 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEeccceEEEe
Confidence 46678899999999999999999999999999999999999999996 99999999999999999999999999999996
Q ss_pred ecCCeeEEecccccCCcceeecccccccccccccCCCCceEEeeceEeeceEEEEEEEecccchhHHHHHHhcccCCCCC
Q 008694 165 MLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVT 244 (557)
Q Consensus 165 ~~~g~~~vdes~ltGes~~~~k~~~~~~~~~~~~~~~~n~l~~Gs~v~~g~~~~~V~~tG~~T~~~~~~~~~~~~~~~~~ 244 (557)
|.+.||||++|||+.|+.|.++ +.+|+||.+.+|.+.++|+++|.+|..|++.+.+.++..+++
T Consensus 97 ---g~~~vdes~lTGEs~pv~k~~g-------------~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~ 160 (556)
T TIGR01525 97 ---GESEVDESALTGESMPVEKKEG-------------DEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEAQSSKA 160 (556)
T ss_pred ---cceEEeehhccCCCCCEecCCc-------------CEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHHhhcCC
Confidence 7899999999999999999886 589999999999999999999999999999999988888899
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHh
Q 008694 245 PLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMAR 324 (557)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~iP~~l~~~~~~~~~~~~~~~~~ 324 (557)
++++.+++++.++.+++++++++.++++...... ..+..++++++..||++|+++++++...+..++++
T Consensus 161 ~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~~-----------~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~ 229 (556)
T TIGR01525 161 PIQRLADRIASYYVPAVLAIALLTFVVWLALGAL-----------GALYRALAVLVVACPCALGLATPVAILVAIGVAAR 229 (556)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----------hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHH
Confidence 9999999999999998888888888776432110 45678889999999999999999999999999999
Q ss_pred cCceeecchhhhhcccccEEEecCCCccCCCccEEEEEEEe
Q 008694 325 LNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVV 365 (557)
Q Consensus 325 ~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 365 (557)
+|+++|+++++|.||++|++|||||||||+|+|++.++...
T Consensus 230 ~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~ 270 (556)
T TIGR01525 230 RGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPL 270 (556)
T ss_pred CCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEec
Confidence 99999999999999999999999999999999999998653
No 26
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=5.1e-43 Score=377.73 Aligned_cols=247 Identities=26% Similarity=0.409 Sum_probs=227.9
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeC-CeEEEeeCCCcCCCcEEEEcCCCccccceEEee
Q 008694 86 AFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRN-GCFSILPAAELVPGDIVEVNVGCKIPADMRMIE 164 (557)
Q Consensus 86 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~v~r~-g~~~~i~~~~l~~GDIv~l~~g~~vPaD~ill~ 164 (557)
+|..+..++++++++.+++.+..+|+++.++++.+..|++++++|+ |.+++|+.++|+|||+|.|++||+|||||+|++
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~ 132 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE 132 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE
Confidence 4555666677788888999999999999999999999999999985 667999999999999999999999999999996
Q ss_pred ecCCeeEEecccccCCcceeecccccccccccccCCCCceEEeeceEeeceEEEEEEEecccchhHHHHHHhcccCCCCC
Q 008694 165 MLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVT 244 (557)
Q Consensus 165 ~~~g~~~vdes~ltGes~~~~k~~~~~~~~~~~~~~~~n~l~~Gs~v~~g~~~~~V~~tG~~T~~~~~~~~~~~~~~~~~ 244 (557)
|.+.||||+||||+.|+.|.++ +.+|+||.+.+|.+.+.|+++|.+|.+|++.+.+.+++.+++
T Consensus 133 ---g~~~vdes~lTGEs~pv~k~~g-------------d~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~ 196 (562)
T TIGR01511 133 ---GESEVDESLVTGESLPVPKKVG-------------DPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKA 196 (562)
T ss_pred ---CceEEehHhhcCCCCcEEcCCC-------------CEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCC
Confidence 8899999999999999999987 489999999999999999999999999999999999888999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHh
Q 008694 245 PLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMAR 324 (557)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~iP~~l~~~~~~~~~~~~~~~~~ 324 (557)
++++.+++++.++++++++++++.++.|. ..+..+++++++.|||+|+++++++...+..++++
T Consensus 197 ~~~~~~d~~a~~~~~~v~~~a~~~~~~~~----------------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~ 260 (562)
T TIGR01511 197 PIQRLADKVAGYFVPVVIAIALITFVIWL----------------FALEFAVTVLIIACPCALGLATPTVIAVATGLAAK 260 (562)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHH
Confidence 99999999999999888888877766542 25677899999999999999999999999999999
Q ss_pred cCceeecchhhhhcccccEEEecCCCccCCCccEEEEEEE
Q 008694 325 LNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICV 364 (557)
Q Consensus 325 ~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~~ 364 (557)
+|+++|+.+++|.|+++|++|||||||||+|+|++.++..
T Consensus 261 ~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~ 300 (562)
T TIGR01511 261 NGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHV 300 (562)
T ss_pred CCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEec
Confidence 9999999999999999999999999999999999999854
No 27
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=7.1e-43 Score=386.63 Aligned_cols=255 Identities=25% Similarity=0.354 Sum_probs=234.8
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeCCeEEEeeCCCcCCCcEEEEcCCCccccceEEeee
Q 008694 86 AFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEM 165 (557)
Q Consensus 86 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDIv~l~~g~~vPaD~ill~~ 165 (557)
.|..+..++++++++.+++.+++.|+++.++++.+..+.+++++|||++++|++++|+|||+|.|++||+|||||+|++
T Consensus 205 ~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~- 283 (741)
T PRK11033 205 ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLS- 283 (741)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEE-
Confidence 4566788888899999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred cCCeeEEecccccCCcceeecccccccccccccCCCCceEEeeceEeeceEEEEEEEecccchhHHHHHHhcccCCCCCh
Q 008694 166 LSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTP 245 (557)
Q Consensus 166 ~~g~~~vdes~ltGes~~~~k~~~~~~~~~~~~~~~~n~l~~Gs~v~~g~~~~~V~~tG~~T~~~~~~~~~~~~~~~~~~ 245 (557)
|.+.||||+||||+.|+.|.++ +.+|+||.+.+|.+.+.|+.+|.+|.++++.+.+.+++.+++|
T Consensus 284 --g~~~vdes~lTGEs~Pv~k~~G-------------d~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~ 348 (741)
T PRK11033 284 --PFASFDESALTGESIPVERATG-------------EKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAP 348 (741)
T ss_pred --CcEEeecccccCCCCCEecCCC-------------CeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCCh
Confidence 7899999999999999999987 5899999999999999999999999999999999998888999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhc
Q 008694 246 LKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARL 325 (557)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~iP~~l~~~~~~~~~~~~~~~~~~ 325 (557)
+++.+++++.+++++++++++++++++...+.. .+...+..+++++++.|||+|.++++++...+..+++++
T Consensus 349 ~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~~--------~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~ 420 (741)
T PRK11033 349 IERFIDRFSRIYTPAIMLVALLVILVPPLLFAA--------PWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARR 420 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC--------CHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHC
Confidence 999999999999999999999888876432211 223456678899999999999999999999999999999
Q ss_pred CceeecchhhhhcccccEEEecCCCccCCCccEEEEEEE
Q 008694 326 NAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICV 364 (557)
Q Consensus 326 ~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~~ 364 (557)
|+++|+.+++|.|+++|++|||||||||+|+|+|.++..
T Consensus 421 gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~ 459 (741)
T PRK11033 421 GALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHP 459 (741)
T ss_pred CeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEe
Confidence 999999999999999999999999999999999999864
No 28
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.9e-45 Score=375.21 Aligned_cols=431 Identities=23% Similarity=0.291 Sum_probs=303.3
Q ss_pred CCCCH-HHHHHHHhhcCCCCCCCcccchHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCccccchhhHHHHHHHHHHH
Q 008694 22 KGLTD-SQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAAN 100 (557)
Q Consensus 22 ~GL~~-~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (557)
+|+.. .|++.-.+.||+|..+...++ |..++.+.-..|++.+..+...+|++-. +|+..+..+++++.-
T Consensus 161 ~G~~~~~~i~~a~~~~G~N~fdi~vPt-F~eLFkE~A~aPfFVFQVFcvgLWCLDe---------yWYySlFtLfMli~f 230 (1160)
T KOG0209|consen 161 TGHEEESEIKLAKHKYGKNKFDIVVPT-FSELFKEHAVAPFFVFQVFCVGLWCLDE---------YWYYSLFTLFMLIAF 230 (1160)
T ss_pred cCcchHHHHHHHHHHhcCCccccCCcc-HHHHHHHhccCceeeHhHHhHHHHHhHH---------HHHHHHHHHHHHHHH
Confidence 57764 566666677999999986665 8888888888887766665555554443 566666666665543
Q ss_pred HHHHHHHHHHHHHHHHHHHhc--CCCeEEEEeCCeEEEeeCCCcCCCcEEEEcC---CCccccceEEeeecCCeeEEecc
Q 008694 101 AAVGVITETNAEKALEELRAY--QADIATVLRNGCFSILPAAELVPGDIVEVNV---GCKIPADMRMIEMLSNQLRVDQA 175 (557)
Q Consensus 101 ~~i~~~~~~~~~~~~~~l~~~--~~~~~~v~r~g~~~~i~~~~l~~GDIv~l~~---g~~vPaD~ill~~~~g~~~vdes 175 (557)
. .-..+...+.+.++++. ++..+.|+|+++|+.+.++||.|||+|.|.. ...||||.++|. |.|.|||+
T Consensus 231 E---~tlV~Qrm~~lse~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~---GsciVnEa 304 (1160)
T KOG0209|consen 231 E---ATLVKQRMRTLSEFRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLR---GSCIVNEA 304 (1160)
T ss_pred H---HHHHHHHHHHHHHHHhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEe---cceeechh
Confidence 3 33333344555566654 4557899999999999999999999999988 568999999996 99999999
Q ss_pred cccCCcceeecccccccccccc----cCCCCceEEeeceEe-------------eceEEEEEEEecccchhHHHHHHhcc
Q 008694 176 ILTGESCSVEKELDSIIATNAV----YQDKTNILFSGTVVV-------------AGRARAVVVGVGANTAMGSIRDSMLQ 238 (557)
Q Consensus 176 ~ltGes~~~~k~~~~~~~~~~~----~~~~~n~l~~Gs~v~-------------~g~~~~~V~~tG~~T~~~~~~~~~~~ 238 (557)
+|||||.|..|.+......+.. -.++.+++|.||+++ +|-+.+.|++||.+|..|++.+.++.
T Consensus 305 MLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf 384 (1160)
T KOG0209|consen 305 MLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILF 384 (1160)
T ss_pred hhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEe
Confidence 9999999999998765433222 234567999999998 35699999999999999999999988
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 008694 239 TEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALG 318 (557)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~iP~~l~~~~~~~~~~~ 318 (557)
..++.+.-.+.. + +++.+++++++++. ++.|...... -.++-..-|...+.++...+|.-||+-++++...+
T Consensus 385 ~aervTaNn~Et--f--~FILFLlVFAiaAa--~Yvwv~Gskd--~~RsrYKL~LeC~LIlTSVvPpELPmELSmAVNsS 456 (1160)
T KOG0209|consen 385 SAERVTANNRET--F--IFILFLLVFAIAAA--GYVWVEGSKD--PTRSRYKLFLECTLILTSVVPPELPMELSMAVNSS 456 (1160)
T ss_pred cceeeeeccHHH--H--HHHHHHHHHHHHhh--heEEEecccC--cchhhhheeeeeeEEEeccCCCCCchhhhHHHHHH
Confidence 766655433322 2 12222222222221 1111111100 01222334555677888999999999999999999
Q ss_pred HHHHHhcCceeecchhhhhcccccEEEecCCCccCCCccEEEEEEEecccccCcceeeeeeeccccCCCCccccCCCccc
Q 008694 319 TKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQL 398 (557)
Q Consensus 319 ~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (557)
...++|.+++|..+-.+.-.|++|..|||||||||+..|.|.++.-... +.+...+..
T Consensus 457 L~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~------------------~~~~~~~~s---- 514 (1160)
T KOG0209|consen 457 LIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSA------------------DEGALTPAS---- 514 (1160)
T ss_pred HHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccC------------------Ccccccchh----
Confidence 9999999999999999999999999999999999999999999743221 000000100
Q ss_pred cCCCChHHHHHHHHHhcccccceeeccCCCCcceecCChhHHHHHHHHHHcCCCCCCCCchhhhhhhhhhcccccccccc
Q 008694 399 EFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWE 478 (557)
Q Consensus 399 ~~~~~~~~~~~~~~~~~lC~~~~~~~~~~~~~~~~~~~p~E~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (557)
....+ -+..++.||+.....+ + ..|||.|.|.++.. |+.....+.. .+.+ ...
T Consensus 515 --~~p~~----t~~vlAscHsLv~le~--~----lVGDPlEKA~l~~v---~W~~~k~~~v-----~p~~-------~~~ 567 (1160)
T KOG0209|consen 515 --KAPNE----TVLVLASCHSLVLLED--K----LVGDPLEKATLEAV---GWNLEKKNSV-----CPRE-------GNG 567 (1160)
T ss_pred --hCCch----HHHHHHHHHHHHHhcC--c----ccCChHHHHHHHhc---CcccccCccc-----CCCc-------CCC
Confidence 01111 2345678888654321 1 56999999999864 7765432210 0111 002
Q ss_pred cccceeeeecCCccCceEEEEEeeCC-----eEEEEEeCCcHHHHhhccccc
Q 008694 479 IEFKKVSILEFSRDRKMMSVLCSHKQ-----MCVMFSKGAPESVLSRCTNIL 525 (557)
Q Consensus 479 ~~~~il~~~~F~s~rk~mSVvv~~~~-----~~~l~~KGa~e~il~~c~~~~ 525 (557)
...+|.+.+.|.|..||||||++..+ ++++.+|||||.|-++.....
T Consensus 568 ~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~dvP 619 (1160)
T KOG0209|consen 568 KKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRDVP 619 (1160)
T ss_pred cccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHhCc
Confidence 35788999999999999999998643 789999999999998887653
No 29
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=2.9e-43 Score=378.37 Aligned_cols=252 Identities=26% Similarity=0.382 Sum_probs=232.7
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeCCeEEEeeCCCcCCCcEEEEcCCCccccceEEeee
Q 008694 86 AFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEM 165 (557)
Q Consensus 86 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDIv~l~~g~~vPaD~ill~~ 165 (557)
.|+++..++++++++.+++.++++|+++.++++.+..+.+++|+|+|+++.+++++|+|||+|.+++||+|||||++++
T Consensus 17 ~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii~- 95 (536)
T TIGR01512 17 EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLS- 95 (536)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCCCEEEEcCCCEeecceEEEe-
Confidence 4677888888999999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred cCCeeEEecccccCCcceeecccccccccccccCCCCceEEeeceEeeceEEEEEEEecccchhHHHHHHhcccCCCCCh
Q 008694 166 LSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTP 245 (557)
Q Consensus 166 ~~g~~~vdes~ltGes~~~~k~~~~~~~~~~~~~~~~n~l~~Gs~v~~g~~~~~V~~tG~~T~~~~~~~~~~~~~~~~~~ 245 (557)
|.+.||||+||||+.|+.|.++ +.+|+||.+.+|+++++|++||.+|.+|++.+.+.+++.++++
T Consensus 96 --g~~~vdes~lTGEs~pv~k~~g-------------~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~ 160 (536)
T TIGR01512 96 --GTSTVDESALTGESVPVEKAPG-------------DEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAK 160 (536)
T ss_pred --CcEEEEecccCCCCCcEEeCCC-------------CEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHHhhCCCh
Confidence 8899999999999999999886 5899999999999999999999999999999999888888999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhc
Q 008694 246 LKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARL 325 (557)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~iP~~l~~~~~~~~~~~~~~~~~~ 325 (557)
+++.+++++.++.+++++++++.|+++.... .+...+..++++++.+|||+|+++++++...+..++.++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~ 230 (536)
T TIGR01512 161 TQRFIDRFARYYTPVVLAIALAIWLVPGLLK----------RWPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARH 230 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------ccHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHC
Confidence 9999999999999998888888777654311 011256678899999999999999999999999999999
Q ss_pred CceeecchhhhhcccccEEEecCCCccCCCccEEEEEE
Q 008694 326 NAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKIC 363 (557)
Q Consensus 326 ~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~ 363 (557)
|+++|+++++|.+|+++++|||||||||+|+|++.++.
T Consensus 231 gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~ 268 (536)
T TIGR01512 231 GILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVV 268 (536)
T ss_pred CeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEee
Confidence 99999999999999999999999999999999999874
No 30
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=6.3e-41 Score=378.31 Aligned_cols=256 Identities=21% Similarity=0.281 Sum_probs=233.2
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeCCeEEEeeCCCcCCCcEEEEcCCCccccceEEeee
Q 008694 86 AFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEM 165 (557)
Q Consensus 86 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDIv~l~~g~~vPaD~ill~~ 165 (557)
+|-.+..+++++.+..+++.....|+++.++++.+..|++++++|+|++++|+.++|+|||+|.|++||+|||||+|++
T Consensus 285 ~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~- 363 (834)
T PRK10671 285 YYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQ- 363 (834)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEE-
Confidence 3444678888899999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred cCCeeEEecccccCCcceeecccccccccccccCCCCceEEeeceEeeceEEEEEEEecccchhHHHHHHhcccCCCCCh
Q 008694 166 LSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTP 245 (557)
Q Consensus 166 ~~g~~~vdes~ltGes~~~~k~~~~~~~~~~~~~~~~n~l~~Gs~v~~g~~~~~V~~tG~~T~~~~~~~~~~~~~~~~~~ 245 (557)
|.+.||||+||||+.|+.|.++ +.+|+||.+.+|.+.+.|+++|.+|.++++.+.+.+++..+++
T Consensus 364 --g~~~vdeS~lTGEs~pv~k~~g-------------d~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~ 428 (834)
T PRK10671 364 --GEAWLDEAMLTGEPIPQQKGEG-------------DSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPE 428 (834)
T ss_pred --ceEEEeehhhcCCCCCEecCCC-------------CEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCc
Confidence 8899999999999999999987 4899999999999999999999999999999999988888999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhc
Q 008694 246 LKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARL 325 (557)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~iP~~l~~~~~~~~~~~~~~~~~~ 325 (557)
+++.+++++.++++++++++++.+++|.... . ...+...+..+++++++.|||+|+++++++...+..+++++
T Consensus 429 ~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~-~------~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~ 501 (834)
T PRK10671 429 IGQLADKISAVFVPVVVVIALVSAAIWYFFG-P------APQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEF 501 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-C------chHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHC
Confidence 9999999999999888888887776654321 0 01234456778999999999999999999999999999999
Q ss_pred CceeecchhhhhcccccEEEecCCCccCCCccEEEEEEE
Q 008694 326 NAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICV 364 (557)
Q Consensus 326 ~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~~ 364 (557)
|+++|+.+++|.|+++|++|||||||||+|+|++.++..
T Consensus 502 gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~ 540 (834)
T PRK10671 502 GVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKT 540 (834)
T ss_pred CeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEc
Confidence 999999999999999999999999999999999998754
No 31
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-41 Score=365.48 Aligned_cols=258 Identities=26% Similarity=0.354 Sum_probs=237.3
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEe-CCeEEEeeCCCcCCCcEEEEcCCCccccceEEe
Q 008694 85 TAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLR-NGCFSILPAAELVPGDIVEVNVGCKIPADMRMI 163 (557)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~v~r-~g~~~~i~~~~l~~GDIv~l~~g~~vPaD~ill 163 (557)
.||..+..+++++++..+++.+...|+++.++++.++.|+.+++++ ||+.++|+.++|++||+|.|+|||+||+||+|+
T Consensus 172 ~yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~ 251 (713)
T COG2217 172 VYFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVV 251 (713)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEE
Confidence 3557788888999999999999999999999999999999998877 455999999999999999999999999999999
Q ss_pred eecCCeeEEecccccCCcceeecccccccccccccCCCCceEEeeceEeeceEEEEEEEecccchhHHHHHHhcccCCCC
Q 008694 164 EMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEV 243 (557)
Q Consensus 164 ~~~~g~~~vdes~ltGes~~~~k~~~~~~~~~~~~~~~~n~l~~Gs~v~~g~~~~~V~~tG~~T~~~~~~~~~~~~~~~~ 243 (557)
+ |...||||++||||.|+.|.+++ .+++||.+.+|.....|+++|.+|.++++.+.+.+++..+
T Consensus 252 ~---G~s~vDeS~iTGEs~PV~k~~Gd-------------~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~K 315 (713)
T COG2217 252 S---GSSSVDESMLTGESLPVEKKPGD-------------EVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSK 315 (713)
T ss_pred e---CcEEeecchhhCCCCCEecCCCC-------------EEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCC
Confidence 5 99999999999999999999984 8999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 008694 244 TPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMA 323 (557)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~iP~~l~~~~~~~~~~~~~~~~ 323 (557)
+|+++.+++++.++++..++++++.+++|..... ..+...+..++++++..|||+|.++++++...+..+.+
T Consensus 316 a~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~--------~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA 387 (713)
T COG2217 316 APIQRLADRVASYFVPVVLVIAALTFALWPLFGG--------GDWETALYRALAVLVIACPCALGLATPTAILVGIGRAA 387 (713)
T ss_pred chHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcC--------CcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHH
Confidence 9999999999999999888888888876544322 12345678899999999999999999999999999999
Q ss_pred hcCceeecchhhhhcccccEEEecCCCccCCCccEEEEEEEec
Q 008694 324 RLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVH 366 (557)
Q Consensus 324 ~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~ 366 (557)
++|+++|+.+++|.++++|+++||||||||+|+|.+.++...+
T Consensus 388 ~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~ 430 (713)
T COG2217 388 RRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALD 430 (713)
T ss_pred hCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCC
Confidence 9999999999999999999999999999999999999987543
No 32
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.3e-38 Score=332.36 Aligned_cols=269 Identities=22% Similarity=0.316 Sum_probs=243.2
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeCCe-EEEeeCCCcCCCcEEEEcCCCccccceE
Q 008694 83 GLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGC-FSILPAAELVPGDIVEVNVGCKIPADMR 161 (557)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~-~~~i~~~~l~~GDIv~l~~g~~vPaD~i 161 (557)
+..+|-++..++.++.+..+++.....++-..+..+..+.|.++.++.+|+ .++|+.+.+++||+|+|.||++||+||+
T Consensus 337 ~~tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~ 416 (951)
T KOG0207|consen 337 PPTFFDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGV 416 (951)
T ss_pred cchhccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccE
Confidence 445556677777888888999988888999999999999999999999996 8999999999999999999999999999
Q ss_pred EeeecCCeeEEecccccCCcceeecccccccccccccCCCCceEEeeceEeeceEEEEEEEecccchhHHHHHHhcccCC
Q 008694 162 MIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTED 241 (557)
Q Consensus 162 ll~~~~g~~~vdes~ltGes~~~~k~~~~~~~~~~~~~~~~n~l~~Gs~v~~g~~~~~V~~tG~~T~~~~~~~~~~~~~~ 241 (557)
+++ |+++||||.+|||+.|+.|++++ .+.+||...+|.....++.+|.||.++++.+.+..++.
T Consensus 417 Vv~---Gss~VDEs~iTGEs~PV~Kk~gs-------------~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~ 480 (951)
T KOG0207|consen 417 VVD---GSSEVDESLITGESMPVPKKKGS-------------TVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQL 480 (951)
T ss_pred EEe---CceeechhhccCCceecccCCCC-------------eeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHc
Confidence 996 99999999999999999999984 89999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-C-CCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 008694 242 EVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFR-D-PSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGT 319 (557)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~i~~l~~~iP~~l~~~~~~~~~~~~ 319 (557)
.+.|+|+.+++++.++.++++++++..+++|..... . .....|...+...|..++++++.+|||+|.++++++.+.+.
T Consensus 481 sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvat 560 (951)
T KOG0207|consen 481 SKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVAT 560 (951)
T ss_pred ccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEe
Confidence 999999999999999999999999988888765432 1 11223345667788899999999999999999999999999
Q ss_pred HHHHhcCceeecchhhhhcccccEEEecCCCccCCCccEEEEEEEecc
Q 008694 320 KRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHS 367 (557)
Q Consensus 320 ~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~ 367 (557)
...+++|+++|..+.+|.+.+++++.||||||||+|++.+.++....+
T Consensus 561 gvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~ 608 (951)
T KOG0207|consen 561 GVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSN 608 (951)
T ss_pred chhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCC
Confidence 999999999999999999999999999999999999999999876554
No 33
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=100.00 E-value=3.6e-36 Score=290.66 Aligned_cols=228 Identities=32% Similarity=0.518 Sum_probs=199.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCe-EEEEeCCeEEEeeCCCcCCCcEEEEcCCCccccceEEeeecCCeeE
Q 008694 93 ILLILAANAAVGVITETNAEKALEELRAYQADI-ATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLR 171 (557)
Q Consensus 93 ~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~-~~v~r~g~~~~i~~~~l~~GDIv~l~~g~~vPaD~ill~~~~g~~~ 171 (557)
++++++++.++..++++++++.++++++..+++ +.|+|||+++.++++||+|||||++++||++||||++++ +|.+.
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~--~g~~~ 79 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLE--SGSAY 79 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEE--SSEEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCcccee--ccccc
Confidence 456677788899999999999999999988887 999999999999999999999999999999999999997 69999
Q ss_pred EecccccCCcceeecccccccccccccCCCCceEEeeceEeeceEEEEEEEecccchhHHHHHHhcccCCCCChhHHHHH
Q 008694 172 VDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLD 251 (557)
Q Consensus 172 vdes~ltGes~~~~k~~~~~~~~~~~~~~~~n~l~~Gs~v~~g~~~~~V~~tG~~T~~~~~~~~~~~~~~~~~~~~~~~~ 251 (557)
||||.+|||+.|+.|.+. ..+.+|++|+||.+.+|++.++|++||.+|..|++.+.....+.+++++++.++
T Consensus 80 vd~s~ltGes~pv~k~~~--------~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~ 151 (230)
T PF00122_consen 80 VDESALTGESEPVKKTPL--------PLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLN 151 (230)
T ss_dssp EECHHHHSBSSEEEESSS--------CCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHH
T ss_pred cccccccccccccccccc--------cccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhH
Confidence 999999999999999954 345579999999999999999999999999999999999888878899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCceeec
Q 008694 252 EFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRS 331 (557)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~iP~~l~~~~~~~~~~~~~~~~~~~i~~~~ 331 (557)
++..++.++.++++++++++++.+. ...++...+..+++++++++|++|+++++++..+++.++.++|+++|+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~ 224 (230)
T PF00122_consen 152 KIAKILIIIILAIAILVFIIWFFND-------SGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKN 224 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCHTGS-------TTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESS
T ss_pred HHHHHHHhcccccchhhhccceecc-------cccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeC
Confidence 9999999888888888776654420 112344567788999999999999999999999999999999999999
Q ss_pred chhhhh
Q 008694 332 LPSVET 337 (557)
Q Consensus 332 ~~~~e~ 337 (557)
++++|.
T Consensus 225 ~~a~E~ 230 (230)
T PF00122_consen 225 LSALEA 230 (230)
T ss_dssp TTHHHH
T ss_pred cccccC
Confidence 999985
No 34
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=99.97 E-value=1.9e-29 Score=250.58 Aligned_cols=367 Identities=22% Similarity=0.279 Sum_probs=254.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC----Ccccc--chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-eEEEEeC
Q 008694 59 DLLVKILIAAAVISFFLALING----ETGLT--AFLEPSVILLILAANAAVGVITETNAEKALEELRAYQAD-IATVLRN 131 (557)
Q Consensus 59 ~~~~~~~~~~~~i~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~-~~~v~r~ 131 (557)
+|..+...+.+++..++.+.+. ..... +....+++++.++...+-+.+.|-|.|.+-+.+++.+.+ .++++++
T Consensus 32 NPVMFvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~ 111 (681)
T COG2216 32 NPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLLRA 111 (681)
T ss_pred CCeEEeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcC
Confidence 4444445555555554444332 11111 122233444444555566777888888888888876554 4566665
Q ss_pred -CeEEEeeCCCcCCCcEEEEcCCCccccceEEeeecCCeeEEecccccCCcceeecccccccccccccCCCCceEEeece
Q 008694 132 -GCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTV 210 (557)
Q Consensus 132 -g~~~~i~~~~l~~GDIv~l~~g~~vPaD~ill~~~~g~~~vdes~ltGes~~~~k~~~~~~~~~~~~~~~~n~l~~Gs~ 210 (557)
|.++.+++.+|+.||+|++..||.||+||.+++ |.+.||||.+||||.|+.|+++.. . .-+-.||.
T Consensus 112 ~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIe---G~asVdESAITGESaPViresGgD---------~-ssVtGgT~ 178 (681)
T COG2216 112 DGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIE---GVASVDESAITGESAPVIRESGGD---------F-SSVTGGTR 178 (681)
T ss_pred CCCeeeccccccccCCEEEEecCCCccCCCeEEe---eeeecchhhccCCCcceeeccCCC---------c-ccccCCcE
Confidence 899999999999999999999999999999996 999999999999999999998841 1 23788999
Q ss_pred EeeceEEEEEEEecccchhHHHHHHhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCcchhhHHH
Q 008694 211 VVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIH 290 (557)
Q Consensus 211 v~~g~~~~~V~~tG~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (557)
++++|++..++....+|.+-++...+..++++++|-+--+.-+..-+.++.++.... +..+..|.. +. -.
T Consensus 179 v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTliFL~~~~T--l~p~a~y~~---g~-----~~ 248 (681)
T COG2216 179 VLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTLIFLLAVAT--LYPFAIYSG---GG-----AA 248 (681)
T ss_pred EeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHHHHHHHHh--hhhHHHHcC---CC-----Cc
Confidence 999999999999999999999999999988888886655543322222211111111 111111111 00 01
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCceeecchhhhhcccccEEEecCCCccCCCccEEEEEEEeccccc
Q 008694 291 YFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQ 370 (557)
Q Consensus 291 ~~~~~i~~l~~~iP~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~ 370 (557)
.+...++++++++|-.+.-.++..-..++.|+.+.+++.++..+.|..|.+|+++.|||||+|-|+-.-.++...++.
T Consensus 249 ~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~gv-- 326 (681)
T COG2216 249 SVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVPGV-- 326 (681)
T ss_pred CHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhheecCCCC--
Confidence 245678899999999999999998999999999999999999999999999999999999999998666665543321
Q ss_pred CcceeeeeeeccccCCCCccccCCCccccCCCChHHHHHHHHHhcccccceeeccCCCCcceecCChhHHHHHHHHHHcC
Q 008694 371 GPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVG 450 (557)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lC~~~~~~~~~~~~~~~~~~~p~E~all~~a~~~g 450 (557)
...++..+..+++-.. ..|.-.+++++|++.|
T Consensus 327 -----------------------------------~~~~la~aa~lsSl~D-------------eTpEGrSIV~LA~~~~ 358 (681)
T COG2216 327 -----------------------------------SEEELADAAQLASLAD-------------ETPEGRSIVELAKKLG 358 (681)
T ss_pred -----------------------------------CHHHHHHHHHHhhhcc-------------CCCCcccHHHHHHHhc
Confidence 1122333333332111 2355567899999988
Q ss_pred CCCCCCCchhhhhhhhhhcccccccccccccceeeeecCCccCceEEEEEeeCCeEEEEEeCCcHHHHhhccc
Q 008694 451 LPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTN 523 (557)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rk~mSVvv~~~~~~~l~~KGa~e~il~~c~~ 523 (557)
+..-.+. ... ...-+||+.+.|+..|-..+. .-+-|||.+.|....+.
T Consensus 359 ~~~~~~~-------------------~~~---~~~fvpFtA~TRmSGvd~~~~---~~irKGA~dai~~~v~~ 406 (681)
T COG2216 359 IELREDD-------------------LQS---HAEFVPFTAQTRMSGVDLPGG---REIRKGAVDAIRRYVRE 406 (681)
T ss_pred cCCCccc-------------------ccc---cceeeecceecccccccCCCC---ceeecccHHHHHHHHHh
Confidence 5432111 001 123469998876655544432 45679999999987773
No 35
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.79 E-value=2.1e-19 Score=145.56 Aligned_cols=91 Identities=36% Similarity=0.597 Sum_probs=74.2
Q ss_pred cccccceeeccCCCCcceecCChhHHHHHHHHHHcCCCCCCCCchhhhhhhhhhcccccccccccccceeeeecCCccCc
Q 008694 415 ALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRK 494 (557)
Q Consensus 415 ~lC~~~~~~~~~~~~~~~~~~~p~E~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rk 494 (557)
+|||++.+..+++.......|+|+|.||+.|+.+.|..... ...+..|++++++||||+||
T Consensus 1 ~LCn~a~~~~~~~~~~~~~~G~ptE~ALl~~~~~~g~~~~~-------------------~~~~~~~~~~~~~pF~S~rK 61 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEEIIGDPTEKALLRFAKKLGVGIDI-------------------KEIRSKYKIVAEIPFDSERK 61 (91)
T ss_pred CCccccEeecCCCCccccccCCcCHHHHHHHHHHcCCCCcH-------------------HHHHhhcceeEEEccCcccc
Confidence 58999988766555444477999999999999999764321 12267899999999999999
Q ss_pred eEEEEEeeCCeEEEEEeCCcHHHHhhcccc
Q 008694 495 MMSVLCSHKQMCVMFSKGAPESVLSRCTNI 524 (557)
Q Consensus 495 ~mSVvv~~~~~~~l~~KGa~e~il~~c~~~ 524 (557)
|||||+++++.+++|+|||||.||++|+++
T Consensus 62 ~msvv~~~~~~~~~~~KGA~e~il~~Ct~i 91 (91)
T PF13246_consen 62 RMSVVVRNDGKYILYVKGAPEVILDRCTHI 91 (91)
T ss_pred eeEEEEeCCCEEEEEcCCChHHHHHhcCCC
Confidence 999999943367889999999999999974
No 36
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=99.49 E-value=7e-14 Score=107.25 Aligned_cols=69 Identities=33% Similarity=0.614 Sum_probs=65.8
Q ss_pred hhcCCHHHHHHhhCCCCCCCCCHHHHHHHHhhcCCCCCCCcccchHHHHHHHHhhHHHHHHHHHHHHHH
Q 008694 4 AYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVIS 72 (557)
Q Consensus 4 ~~~~~~~~~~~~l~~~~~~GL~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 72 (557)
||..++++++++|+++...||+++|+++|+++||+|+++.++..++|+.++++|.+++.+++++++++|
T Consensus 1 w~~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 1 WHQLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp -TTSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 799999999999999999999999999999999999999999999999999999999999999998875
No 37
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=99.19 E-value=5.6e-11 Score=89.75 Aligned_cols=62 Identities=35% Similarity=0.512 Sum_probs=57.7
Q ss_pred hhCCCCCCCCCHHHHHHHHhhcCCCCCCCcccchHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 008694 15 FFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLA 76 (557)
Q Consensus 15 ~l~~~~~~GL~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 76 (557)
+|+++++.||+++|+++|++.||+|+++.++.+++|..++++|.+++.++++++++++++++
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 57899988999999999999999999999888899999999999999999999999988763
No 38
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.52 E-value=0.0019 Score=68.21 Aligned_cols=38 Identities=29% Similarity=0.441 Sum_probs=34.6
Q ss_pred EEEeCCeEEEeeCCCcCCCcEEEEcCCCccccceEEee
Q 008694 127 TVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIE 164 (557)
Q Consensus 127 ~v~r~g~~~~i~~~~l~~GDIv~l~~g~~vPaD~ill~ 164 (557)
+.+|||...+++..-||.||||-+++|+..||.+.=++
T Consensus 159 ~afRDGhlm~lP~~LLVeGDiIa~RPGQeafan~~g~~ 196 (1354)
T KOG4383|consen 159 SAFRDGHLMELPRILLVEGDIIAFRPGQEAFANCEGFD 196 (1354)
T ss_pred HHhccCeeeecceeEEEeccEEEecCCccccccccccC
Confidence 56799999999999999999999999999999876554
No 39
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=96.62 E-value=0.00075 Score=63.84 Aligned_cols=19 Identities=63% Similarity=0.826 Sum_probs=18.2
Q ss_pred ccEEEecCCCccCCCccEE
Q 008694 341 TTVICSDKTGTLTTNMMSV 359 (557)
Q Consensus 341 v~~i~~DKTGTLT~n~m~v 359 (557)
|++||||||||||+++|.+
T Consensus 1 i~~i~fDktGTLt~~~~~v 19 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV 19 (215)
T ss_dssp ESEEEEECCTTTBESHHEE
T ss_pred CeEEEEecCCCcccCeEEE
Confidence 6899999999999999999
No 40
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=94.37 E-value=1.4 Score=52.28 Aligned_cols=201 Identities=15% Similarity=0.206 Sum_probs=112.6
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHhcCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeCC
Q 008694 53 VLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNG 132 (557)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~v~r~g 132 (557)
++..|+..|..+.+++.++..++++++. ... ..+...++.+.+ ++.....++.++++++++.++.. +.
T Consensus 17 lp~~l~~qf~~~~N~yfl~i~ilq~ip~---~s~-~~~~t~~~pL~~-----v~~~~~~~~~~ed~~r~~~d~~~---n~ 84 (1057)
T TIGR01652 17 LPKNLFEQFKRFANLYFLVVALLQQVPI---LSP-TYRGTSIVPLAF-----VLIVTAIKEAIEDIRRRRRDKEV---NN 84 (1057)
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHcCCC---cCC-CCccHhHHhHHH-----HHHHHHHHHHHHHHHHHHhHHHH---hC
Confidence 4789999999999999999888887752 222 233333333322 34445788999999999887532 22
Q ss_pred eEEEeeCCCcCC-CcEEEEcCCCccccceEEeeecCCe------eEEecccccCCcceeecccccc--cccccccC----
Q 008694 133 CFSILPAAELVP-GDIVEVNVGCKIPADMRMIEMLSNQ------LRVDQAILTGESCSVEKELDSI--IATNAVYQ---- 199 (557)
Q Consensus 133 ~~~~i~~~~l~~-GDIv~l~~g~~vPaD~ill~~~~g~------~~vdes~ltGes~~~~k~~~~~--~~~~~~~~---- 199 (557)
....+- +. |....+...|..|-|.++|. .|+ ..+..+.-+|...-.+...... +..+....
T Consensus 85 ~~~~v~----~~~~~~~~i~~~~l~~GDiv~l~--~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~~~~ 158 (1057)
T TIGR01652 85 RLTEVL----EGHGQFVEIPWKDLRVGDIVKVK--KDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQK 158 (1057)
T ss_pred cEEEEE----CCCCcEEEeeeecccCCCEEEEc--CCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchhhhc
Confidence 222222 32 68889999999999999997 343 2344444445443333322211 11111100
Q ss_pred -------------------CCCceEEeeceEeec-eE----------EE-EEE----EecccchhHHHHHHhcccCCCCC
Q 008694 200 -------------------DKTNILFSGTVVVAG-RA----------RA-VVV----GVGANTAMGSIRDSMLQTEDEVT 244 (557)
Q Consensus 200 -------------------~~~n~l~~Gs~v~~g-~~----------~~-~V~----~tG~~T~~~~~~~~~~~~~~~~~ 244 (557)
+.+=..|.|+...++ .. .| .|. ..|.-.+.|.-.+........+.
T Consensus 159 ~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~~~~~ 238 (1057)
T TIGR01652 159 MLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQAPS 238 (1057)
T ss_pred cCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCCCCcc
Confidence 001135778777654 10 01 111 23444455776666554433322
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008694 245 PLKKKLDEFGTFLAKVIAGICVLVWIVN 272 (557)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (557)
-...+++..+.+..+++++.+++.++.
T Consensus 239 -k~s~le~~ln~~~~~l~~~~i~l~~i~ 265 (1057)
T TIGR01652 239 -KRSRLEKELNFLIIILFCLLFVLCLIS 265 (1057)
T ss_pred -cccHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 234677777777766666555544443
No 41
>PLN03190 aminophospholipid translocase; Provisional
Probab=91.62 E-value=0.46 Score=56.35 Aligned_cols=200 Identities=14% Similarity=0.139 Sum_probs=117.1
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHhcCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeCC
Q 008694 53 VLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNG 132 (557)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~v~r~g 132 (557)
++++++..|..+.++++++..++++++.......+...+.++++++ -...++.++++++++.++.. +.
T Consensus 103 lP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~~t~~~PL~~vl~---------v~~ike~~Ed~~r~k~d~~~---N~ 170 (1178)
T PLN03190 103 LPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGASILPLAFVLL---------VTAVKDAYEDWRRHRSDRIE---NN 170 (1178)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCcchHHHHHHHHHH---------HHHHHHHHHHHHHHHhHHhh---cC
Confidence 6778889999999999999999998886544443333333333333 23468899999999887542 23
Q ss_pred eEEEeeCCCcCCCcEEEEcCCCccccceEEeeecCCe------eEEecccccCCcceeecccccccc--ccccc---C--
Q 008694 133 CFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQ------LRVDQAILTGESCSVEKELDSIIA--TNAVY---Q-- 199 (557)
Q Consensus 133 ~~~~i~~~~l~~GDIv~l~~g~~vPaD~ill~~~~g~------~~vdes~ltGes~~~~k~~~~~~~--~~~~~---~-- 199 (557)
+...+ +.-|....+...|..|-|.+.+. .|+ ..+++|.-+|...--+........ .+... .
T Consensus 171 ~~~~v----~~~~~~~~i~~~~i~vGDiv~v~--~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~~~~~~~ 244 (1178)
T PLN03190 171 RLAWV----LVDDQFQEKKWKDIRVGEIIKIQ--ANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETLSK 244 (1178)
T ss_pred cEEEE----EECCeEEEEeHHHCCCCCEEEEC--CCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecccchhhhc
Confidence 33332 24578889999999999999997 333 233444444655443333221111 11100 0
Q ss_pred --CC-----------C--c-eEEeeceEeeceEE----------EEEE-----EecccchhHHHHHHhcccCCCCChhHH
Q 008694 200 --DK-----------T--N-ILFSGTVVVAGRAR----------AVVV-----GVGANTAMGSIRDSMLQTEDEVTPLKK 248 (557)
Q Consensus 200 --~~-----------~--n-~l~~Gs~v~~g~~~----------~~V~-----~tG~~T~~~~~~~~~~~~~~~~~~~~~ 248 (557)
+. . + .-|.|+...+|.-. |.++ ..|.-.+.|.-.+.++.....+.+ ..
T Consensus 245 ~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~~N~~~~~~K-~S 323 (1178)
T PLN03190 245 IPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAMLNNSGAPSK-RS 323 (1178)
T ss_pred chhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHhhcCCCCCCC-cc
Confidence 00 0 0 23566665554211 1111 245555678888877776555443 44
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 008694 249 KLDEFGTFLAKVIAGICVLVWIV 271 (557)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~ 271 (557)
.+++..+.++++++++.+++.++
T Consensus 324 ~le~~~N~~vi~l~~i~~~l~~i 346 (1178)
T PLN03190 324 RLETRMNLEIIILSLFLIALCTI 346 (1178)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHH
Confidence 56777777776666555444333
No 42
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=86.38 E-value=1.4 Score=51.44 Aligned_cols=69 Identities=16% Similarity=0.172 Sum_probs=43.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--eE------EEEeCCeEEEeeCCCcCCCcEEEEcCCCc
Q 008694 87 FLEPSVILLILAANAAVGVITETNAEKALEELRAYQAD--IA------TVLRNGCFSILPAAELVPGDIVEVNVGCK 155 (557)
Q Consensus 87 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~--~~------~v~r~g~~~~i~~~~l~~GDIv~l~~g~~ 155 (557)
..+.+..+.+..+-..++.+.+++..+.+........+ .+ .-++-|..+.+.-++.+|+|++.+...+.
T Consensus 84 ~~pl~~vl~~t~iKd~~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~ 160 (1151)
T KOG0206|consen 84 LVPLLFVLGITAIKDAIEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDE 160 (1151)
T ss_pred eeceeeeehHHHHHHHHhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCC
Confidence 44455555666677777777777666666554332222 11 22355777888888888888888877653
No 43
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=81.68 E-value=83 Score=37.58 Aligned_cols=23 Identities=22% Similarity=0.278 Sum_probs=19.0
Q ss_pred eCCeEEEee--CCCcCCCcEEEEcC
Q 008694 130 RNGCFSILP--AAELVPGDIVEVNV 152 (557)
Q Consensus 130 r~g~~~~i~--~~~l~~GDIv~l~~ 152 (557)
.-|....+. ..+.+|.|.+.++.
T Consensus 248 vpGDiv~l~~~~g~~iPaD~~ll~g 272 (1054)
T TIGR01657 248 VPGDIVSIPRPEEKTMPCDSVLLSG 272 (1054)
T ss_pred CCCCEEEEecCCCCEecceEEEEeC
Confidence 357788888 89999999999863
No 44
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=71.83 E-value=1.9e+02 Score=34.01 Aligned_cols=63 Identities=25% Similarity=0.211 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-----CeEEE-----EeCCeEEEeeCCCcCCCcEEEEcCC
Q 008694 91 SVILLILAANAAVGVITETNAEKALEELRAYQA-----DIATV-----LRNGCFSILPAAELVPGDIVEVNVG 153 (557)
Q Consensus 91 ~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~-----~~~~v-----~r~g~~~~i~~~~l~~GDIv~l~~g 153 (557)
++++++..+...+.-....++-+.+.++..... .+... +.-|....+...|.+|-|.+.++..
T Consensus 43 l~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRdg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~ 115 (917)
T TIGR01116 43 LLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLK 115 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEec
Confidence 333333444455566666666666776654322 22222 2468889999999999999999765
No 45
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=66.65 E-value=1.4e+02 Score=35.22 Aligned_cols=23 Identities=26% Similarity=0.281 Sum_probs=20.1
Q ss_pred eCCeEEEeeCCCcCCCcEEEEcC
Q 008694 130 RNGCFSILPAAELVPGDIVEVNV 152 (557)
Q Consensus 130 r~g~~~~i~~~~l~~GDIv~l~~ 152 (557)
.-|....+...|.+|.|.+.++.
T Consensus 185 v~GDiV~l~~Gd~IPaD~~li~g 207 (941)
T TIGR01517 185 VVGDIVSLSTGDVVPADGVFISG 207 (941)
T ss_pred CCCCEEEECCCCEecccEEEEEc
Confidence 46888999999999999999864
No 46
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=62.63 E-value=2.2e+02 Score=33.44 Aligned_cols=130 Identities=18% Similarity=0.187 Sum_probs=74.5
Q ss_pred hcCCHHHHHHhhCCCCCCCCCHHHHHHHHhhcCCCCCCCcccchHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-hcCCcc
Q 008694 5 YARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLAL-INGETG 83 (557)
Q Consensus 5 ~~~~~~~~~~~l~~~~~~GL~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~ 83 (557)
+-++-+|+.+++.....+.+...+-...... ++.-+..-+...+.....+.+++...... ...
T Consensus 43 ~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~-------------fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~~~~--- 106 (917)
T COG0474 43 TGLSEEEVKRRLKKYGPNELPEEKKRSLLKK-------------FLRQFKDPFIILLLVAALLSAFVGDWVDAGVDA--- 106 (917)
T ss_pred cCCCHHHHHHHHhhcCCccccccccCcHHHH-------------HHHHHHHHHHHHHHHHHHHHHHhhcccccCcce---
Confidence 4556788888888665555544333333333 33333333333444444444444443211 011
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCe------EE----EEeCCeEEEeeCCCcCCCcEEEEcCC
Q 008694 84 LTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADI------AT----VLRNGCFSILPAAELVPGDIVEVNVG 153 (557)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~------~~----v~r~g~~~~i~~~~l~~GDIv~l~~g 153 (557)
+..+.++++..+.+.+..+...++-+.++.+....... .. -+.-|....+...|.+|-|...++..
T Consensus 107 ----~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~ 182 (917)
T COG0474 107 ----IVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESS 182 (917)
T ss_pred ----eeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEec
Confidence 11223333444455788888888888888876643331 11 13468889999999999999999887
Q ss_pred C
Q 008694 154 C 154 (557)
Q Consensus 154 ~ 154 (557)
+
T Consensus 183 ~ 183 (917)
T COG0474 183 D 183 (917)
T ss_pred C
Confidence 6
No 47
>PF12368 DUF3650: Protein of unknown function (DUF3650) ; InterPro: IPR022111 This domain family is found in bacteria, and is approximately 30 amino acids in length. The family is found in association with PF00581 from PFAM. There is a single completely conserved residue N that may be functionally important.
Probab=52.73 E-value=12 Score=22.63 Aligned_cols=15 Identities=27% Similarity=0.543 Sum_probs=13.0
Q ss_pred CCCCCHHHHHHHHhh
Q 008694 21 TKGLTDSQVARHVRI 35 (557)
Q Consensus 21 ~~GL~~~e~~~r~~~ 35 (557)
++|||.+|+++|+..
T Consensus 13 eh~ls~ee~~~RL~~ 27 (28)
T PF12368_consen 13 EHGLSEEEVAERLAA 27 (28)
T ss_pred hcCCCHHHHHHHHHc
Confidence 479999999999875
No 48
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=52.55 E-value=2e+02 Score=26.95 Aligned_cols=197 Identities=17% Similarity=0.171 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEEEeCCeEEEeeCCCcCCCcEEEEcCCCccccceEEeeecCCe-eEEeccccc-CC
Q 008694 103 VGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQ-LRVDQAILT-GE 180 (557)
Q Consensus 103 i~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDIv~l~~g~~vPaD~ill~~~~g~-~~vdes~lt-Ge 180 (557)
-..+..+...+.-+.+++++... ......+ ++-|....+...|.+|-|.+.|. .|+ +..|--.+. |.
T Consensus 9 ~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~v----~r~~~~~~i~~~~L~~GDiI~l~--~g~~vPaD~~ll~~g~ 77 (230)
T PF00122_consen 9 SNIIEIWQEYRSKKQLKKLNNLN-----PQKKVTV----IRDGRWQKIPSSELVPGDIIILK--AGDIVPADGILLESGS 77 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTS-----SSEEEEE----EETTEEEEEEGGGT-TTSEEEEE--TTEBESSEEEEEESSE
T ss_pred HHHHHHHHHHHHHHHHHHHhccC-----CCccEEE----EeccccccchHhhccceeeeecc--cccccccCccceeccc
Confidence 33344444456666666665442 2221222 33478888999999999999987 444 344444444 32
Q ss_pred cceeecccccccccccccCCCC-ceEEeeceEeeceEE--EEEEEecccchhHHHHHHhcccCCCCChhHHHHHHHHHHH
Q 008694 181 SCSVEKELDSIIATNAVYQDKT-NILFSGTVVVAGRAR--AVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFL 257 (557)
Q Consensus 181 s~~~~k~~~~~~~~~~~~~~~~-n~l~~Gs~v~~g~~~--~~V~~tG~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (557)
..--+-.. +....+..+. .....|..+..|+.. +-+...-..|........+.+......+....+++....+
T Consensus 78 ~~vd~s~l----tGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (230)
T PF00122_consen 78 AYVDESAL----TGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKI 153 (230)
T ss_dssp EEEECHHH----HSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHH
T ss_pred cccccccc----cccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHH
Confidence 21111000 0011111110 022367888877533 3333333344333322333333323333345566666666
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Q 008694 258 AKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKR 321 (557)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~iP~~l~~~~~~~~~~~~~~ 321 (557)
....+.+.++.++.....+ ++......+...+...+.++-...|.++.++...+...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~ 210 (230)
T PF00122_consen 154 AKILIIIILAIAILVFIIW-------FFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAI 210 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHC-------HTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHH
T ss_pred HHHHHhcccccchhhhccc-------eecccccccccccccccceeeeecccceeehHHHHHHH
Confidence 6655555444444332100 00000112233344444455555565665555555443
No 49
>PRK11507 ribosome-associated protein; Provisional
Probab=50.96 E-value=21 Score=26.97 Aligned_cols=26 Identities=19% Similarity=0.259 Sum_probs=23.2
Q ss_pred EEEeCCeEEEeeCCCcCCCcEEEEcC
Q 008694 127 TVLRNGCFSILPAAELVPGDIVEVNV 152 (557)
Q Consensus 127 ~v~r~g~~~~i~~~~l~~GDIv~l~~ 152 (557)
.|..||+...-.-+.|++||+|.+..
T Consensus 38 ~V~VNGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 38 QVKVDGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred ceEECCEEecccCCCCCCCCEEEECC
Confidence 57789999999999999999999854
No 50
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=48.08 E-value=5.5e+02 Score=30.58 Aligned_cols=65 Identities=8% Similarity=0.114 Sum_probs=44.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCeEEE-----EeCCeEEEeeCCCcCCCcEEEEcCC
Q 008694 89 EPSVILLILAANAAVGVITETNAEKALEELRAY-----QADIATV-----LRNGCFSILPAAELVPGDIVEVNVG 153 (557)
Q Consensus 89 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~-----~~~~~~v-----~r~g~~~~i~~~~l~~GDIv~l~~g 153 (557)
..++++++..+..++......++-+.+.++... +..+... +.-|....+...|.+|.|.+.++.+
T Consensus 109 ~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~ 183 (997)
T TIGR01106 109 VLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQ 183 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEcc
Confidence 345555555566677788888888778776432 2222222 2468899999999999999999865
No 51
>PF13275 S4_2: S4 domain; PDB: 1P9K_A.
Probab=47.03 E-value=11 Score=28.12 Aligned_cols=25 Identities=36% Similarity=0.545 Sum_probs=14.3
Q ss_pred EEEeCCeEEEeeCCCcCCCcEEEEc
Q 008694 127 TVLRNGCFSILPAAELVPGDIVEVN 151 (557)
Q Consensus 127 ~v~r~g~~~~i~~~~l~~GDIv~l~ 151 (557)
.|..||+...-.-..|.+||+|.+.
T Consensus 34 ~V~VNGe~e~rrg~Kl~~GD~V~~~ 58 (65)
T PF13275_consen 34 EVKVNGEVETRRGKKLRPGDVVEID 58 (65)
T ss_dssp HHEETTB----SS----SSEEEEET
T ss_pred ceEECCEEccccCCcCCCCCEEEEC
Confidence 4668999999999999999999993
No 52
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=46.62 E-value=5e+02 Score=29.75 Aligned_cols=59 Identities=24% Similarity=0.166 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCeEE-E----EeCCeEEEeeCCCcCCCcEEEEcC
Q 008694 94 LLILAANAAVGVITETNAEKALEELRAYQ-----ADIAT-V----LRNGCFSILPAAELVPGDIVEVNV 152 (557)
Q Consensus 94 ~~~~~~~~~i~~~~~~~~~~~~~~l~~~~-----~~~~~-v----~r~g~~~~i~~~~l~~GDIv~l~~ 152 (557)
+++.....++.-+...++.+.+.++.... ..+.. + +.-|....+...|.+|-|-+.++.
T Consensus 65 ~~i~~~i~~~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g 133 (755)
T TIGR01647 65 LLLNATIGFIEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEG 133 (755)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEec
Confidence 33344445667777777777788774322 12211 2 346888999999999999988864
No 53
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=45.23 E-value=5.2e+02 Score=30.25 Aligned_cols=57 Identities=18% Similarity=0.155 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCC-----CeEEEE-----eCCeEEEeeCCCcCCCcEEEEcCC
Q 008694 97 LAANAAVGVITETNAEKALEELRAYQA-----DIATVL-----RNGCFSILPAAELVPGDIVEVNVG 153 (557)
Q Consensus 97 ~~~~~~i~~~~~~~~~~~~~~l~~~~~-----~~~~v~-----r~g~~~~i~~~~l~~GDIv~l~~g 153 (557)
..+..++.-+...++-+.+.++..... .+...+ .-|....+...|.+|-|.+.++..
T Consensus 93 ~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~ 159 (884)
T TIGR01522 93 VVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAV 159 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcC
Confidence 334455666677777777887744322 222222 357889999999999999998753
No 54
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=45.10 E-value=12 Score=29.35 Aligned_cols=23 Identities=30% Similarity=0.424 Sum_probs=16.2
Q ss_pred EeeCCCcCCCcEEEE-cCCCcccc
Q 008694 136 ILPAAELVPGDIVEV-NVGCKIPA 158 (557)
Q Consensus 136 ~i~~~~l~~GDIv~l-~~g~~vPa 158 (557)
.+.-.+|.+||.|.+ +.||.||-
T Consensus 44 ~i~~~~i~~Gd~V~V~raGdVIP~ 67 (82)
T PF03120_consen 44 YIKELDIRIGDTVLVTRAGDVIPK 67 (82)
T ss_dssp HHHHTT-BBT-EEEEEEETTTEEE
T ss_pred HHHHcCCCCCCEEEEEECCCccce
Confidence 445678999997766 77999995
No 55
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=42.86 E-value=6.1e+02 Score=29.64 Aligned_cols=57 Identities=19% Similarity=0.167 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCC-----------Ce-EEE----EeCCeEEEeeCCCcCCCcEEEEcC
Q 008694 95 LILAANAAVGVITETNAEKALEELRAYQA-----------DI-ATV----LRNGCFSILPAAELVPGDIVEVNV 152 (557)
Q Consensus 95 ~~~~~~~~i~~~~~~~~~~~~~~l~~~~~-----------~~-~~v----~r~g~~~~i~~~~l~~GDIv~l~~ 152 (557)
+...+.. +.-....++.+.++++..... .+ ..+ +.-|....+...|.+|-|.+.++.
T Consensus 100 ~~~~i~~-~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g 172 (867)
T TIGR01524 100 ASGLLGF-IQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISA 172 (867)
T ss_pred HHHHHHH-HHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEec
Confidence 3333444 444444577777877754321 11 112 246888999999999999998874
No 56
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=42.12 E-value=13 Score=33.94 Aligned_cols=14 Identities=36% Similarity=0.304 Sum_probs=12.8
Q ss_pred EEecCCCccCCCcc
Q 008694 344 ICSDKTGTLTTNMM 357 (557)
Q Consensus 344 i~~DKTGTLT~n~m 357 (557)
+|||.+||||.+.+
T Consensus 1 v~fD~DGTL~~~~~ 14 (192)
T PF12710_consen 1 VIFDFDGTLTDSDS 14 (192)
T ss_dssp EEEESBTTTBSSHH
T ss_pred eEEecCcCeecCCC
Confidence 69999999999994
No 57
>PF15584 Imm44: Immunity protein 44
Probab=38.46 E-value=16 Score=28.96 Aligned_cols=19 Identities=26% Similarity=0.338 Sum_probs=15.9
Q ss_pred CCcEEEEcCCCccccceEE
Q 008694 144 PGDIVEVNVGCKIPADMRM 162 (557)
Q Consensus 144 ~GDIv~l~~g~~vPaD~il 162 (557)
+.+-..|+.|++||||||-
T Consensus 13 ~~~~~~I~SG~~iP~~GIw 31 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIW 31 (94)
T ss_pred CCCCCEEecCCCcccCCeE
Confidence 4556788999999999986
No 58
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
Probab=37.50 E-value=37 Score=27.65 Aligned_cols=36 Identities=28% Similarity=0.411 Sum_probs=26.4
Q ss_pred EEEEeCCeEEEeeCCCcCCCcEEEEcCCCccccceEEe
Q 008694 126 ATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMI 163 (557)
Q Consensus 126 ~~v~r~g~~~~i~~~~l~~GDIv~l~~g~~vPaD~ill 163 (557)
-+|.-||... -+++++++||+|.|.-|...- ...|+
T Consensus 34 GrV~vNG~~a-KpS~~VK~GD~l~i~~~~~~~-~v~Vl 69 (100)
T COG1188 34 GRVKVNGQRA-KPSKEVKVGDILTIRFGNKEF-TVKVL 69 (100)
T ss_pred CeEEECCEEc-ccccccCCCCEEEEEeCCcEE-EEEEE
Confidence 3556677666 789999999999999987532 33444
No 59
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=36.81 E-value=91 Score=23.44 Aligned_cols=31 Identities=26% Similarity=0.296 Sum_probs=23.1
Q ss_pred CeEEEEeCCeEEEee---CCCcCCCcEEEEcCCC
Q 008694 124 DIATVLRNGCFSILP---AAELVPGDIVEVNVGC 154 (557)
Q Consensus 124 ~~~~v~r~g~~~~i~---~~~l~~GDIv~l~~g~ 154 (557)
..+.|-.+|..+++. ..++.|||.|.+..|-
T Consensus 17 ~~A~v~~~G~~~~V~~~lv~~v~~Gd~VLVHaG~ 50 (68)
T PF01455_consen 17 GMAVVDFGGVRREVSLALVPDVKVGDYVLVHAGF 50 (68)
T ss_dssp TEEEEEETTEEEEEEGTTCTSB-TT-EEEEETTE
T ss_pred CEEEEEcCCcEEEEEEEEeCCCCCCCEEEEecCh
Confidence 456777889888885 4568899999999984
No 60
>PF12148 DUF3590: Protein of unknown function (DUF3590); InterPro: IPR021991 This domain is found in eukaryotes, and is typically between 83 and 97 amino acids in length. It is found in association with PF00097 from PFAM, PF02182 from PFAM, PF00628 from PFAM, PF00240 from PFAM. There are two conserved sequence motifs: RAR and NYN. The domain is part of the protein NIRF which has zinc finger and ubiquitinating domains. The function of this domain is likely to be mainly structural, however this has not been confirmed. ; PDB: 3DB4_A 3ASK_A 3DB3_A 2L3R_A.
Probab=31.88 E-value=21 Score=28.06 Aligned_cols=24 Identities=38% Similarity=0.415 Sum_probs=14.7
Q ss_pred EEEeeCCCcCCCcEEEEcCCCccc
Q 008694 134 FSILPAAELVPGDIVEVNVGCKIP 157 (557)
Q Consensus 134 ~~~i~~~~l~~GDIv~l~~g~~vP 157 (557)
...++|++|.||++|.++-+-.-|
T Consensus 58 Rt~l~w~~L~VG~~VMvNYN~d~P 81 (85)
T PF12148_consen 58 RTILKWDELKVGQVVMVNYNVDEP 81 (85)
T ss_dssp -SBE-GGG--TT-EEEEEE-TTST
T ss_pred eEeccHHhCCcccEEEEecCCCCc
Confidence 457899999999999998775544
No 61
>smart00306 HintN Hint (Hedgehog/Intein) domain N-terminal region. Hedgehog/Intein domain, N-terminal region. Domain has been split to accommodate large insertions of endonucleases.
Probab=29.88 E-value=62 Score=25.70 Aligned_cols=26 Identities=38% Similarity=0.392 Sum_probs=19.9
Q ss_pred EEEEeCCeEEEeeCCCcCCCcEEEEc
Q 008694 126 ATVLRNGCFSILPAAELVPGDIVEVN 151 (557)
Q Consensus 126 ~~v~r~g~~~~i~~~~l~~GDIv~l~ 151 (557)
..+.+++..+.+.+++|++||.|.+.
T Consensus 74 ~~~~~~~~~~w~~a~~l~~gd~v~~~ 99 (100)
T smart00306 74 LLVRDGGKLVWVFASELKPGDYVLVP 99 (100)
T ss_pred EEEecCCcEEEEEHHHCCCCCEEEec
Confidence 34556666678899999999998764
No 62
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=29.41 E-value=2.4e+02 Score=21.66 Aligned_cols=23 Identities=13% Similarity=0.197 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 008694 247 KKKLDEFGTFLAKVIAGICVLVW 269 (557)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~ 269 (557)
|+..+++..+++.+..++++++.
T Consensus 6 Q~~ae~l~~~il~~~~iisfi~G 28 (76)
T PF06645_consen 6 QRLAEKLMQYILIISAIISFIVG 28 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 56666666666655555554443
No 63
>PF03453 MoeA_N: MoeA N-terminal region (domain I and II); InterPro: IPR005110 This entry represents the N-terminal and linker domains of the MoeA protein. Proteins in this family contain two structural domains, one of which contains the conserved DGXA motif. These two domains are found in proteins involved in biosynthesis of molybdopterin cofactor however the exact molecular function of this region is uncertain. The majority of molybdenum-containing enzymes utilise a molybdenum cofactor (MoCF or Moco) consisting of a Mo atom coordinated via a cis-dithiolene moiety to molybdopterin (MPT). MoCF is ubiquitous in nature, and the pathway for MoCF biosynthesis is conserved in all three domains of life. MoCF-containing enzymes function as oxidoreductases in carbon, nitrogen, and sulphur metabolism [, ]. In Escherichia coli, biosynthesis of MoCF is a three stage process. It begins with the MoaA and MoaC conversion of GTP to the meta-stable pterin intermediate precursor Z. The second stage involves MPT synthase (MoaD and MoaE), which converts precursor Z to MPT; MoeB is involved in the recycling of MPT synthase. The final step in MoCF synthesis is the attachment of mononuclear Mo to MPT, a process that requires MoeA and which is enhanced by MogA in an Mg2 ATP-dependent manner []. MoCF is the active co-factor in eukaryotic and some prokaryotic molybdo-enzymes, but the majority of bacterial enzymes requiring MoCF, need a modification of MTP for it to be active; MobA is involved in the attachment of a nucleotide monophosphate to MPT resulting in the MGD co-factor, the active co-factor for most prokaryotic molybdo-enzymes. Bacterial two-hybrid studies have revealed the close interactions between MoeA, MogA, and MobA in the synthesis of MoCF []. Moreover the close functional association of MoeA and MogA in the synthesis of MoCF is supported by fact that the known eukaryotic homologues to MoeA and MogA exist as fusion proteins: CNX1 (Q39054 from SWISSPROT) of Arabidopsis thaliana (Mouse-ear cress), mammalian Gephryin (e.g. Q9NQX3 from SWISSPROT) and Drosophila melanogaster (Fruit fly) Cinnamon (P39205 from SWISSPROT) [].; GO: 0032324 molybdopterin cofactor biosynthetic process; PDB: 1UZ5_A 1T3E_B 2FTS_A 2FU3_A 1XI8_A 1WU2_A 2NRS_A 2NRP_B 2NRO_A 2NQV_A ....
Probab=27.44 E-value=72 Score=28.57 Aligned_cols=60 Identities=23% Similarity=0.367 Sum_probs=30.4
Q ss_pred CCCcCCCcEEEEcCCCccc--cceEEeeecCCeeEEecccccCCcceeecccccccccccccCCCCceEEeeceEeeceE
Q 008694 139 AAELVPGDIVEVNVGCKIP--ADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRA 216 (557)
Q Consensus 139 ~~~l~~GDIv~l~~g~~vP--aD~ill~~~~g~~~vdes~ltGes~~~~k~~~~~~~~~~~~~~~~n~l~~Gs~v~~g~~ 216 (557)
...+.+|.-++|..|..+| ||++|-. .++.+.+ +..-+.+.. ..-+|+..+|+-+..|..
T Consensus 81 ~~~l~~g~av~I~TGa~vP~g~DaVV~~---E~~~~~~-----~~i~i~~~~----------~~g~nIr~~G~di~~G~~ 142 (162)
T PF03453_consen 81 PIPLQPGEAVRIMTGAPVPEGADAVVPI---EDTEVEG-----DEIRILKPV----------KPGQNIRPKGEDIKKGEV 142 (162)
T ss_dssp SSB--TTEEEEE-TTSB--TT-SEEEEG---GGCEEET-----TEEEESS------------STTTTEE-TTSSB-TTSE
T ss_pred cccCCCCeEEEEeCCCccCCCCCEEEEe---hheeecc-----cEEEEeecc----------CCCCcEEeCCccccCCCE
Confidence 3678999999999999999 6887753 3333333 222221111 122477788887777763
No 64
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=27.33 E-value=1.1e+03 Score=27.81 Aligned_cols=55 Identities=18% Similarity=0.236 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC-----C-------CeEEE----EeCCeEEEeeCCCcCCCcEEEEcC
Q 008694 98 AANAAVGVITETNAEKALEELRAYQ-----A-------DIATV----LRNGCFSILPAAELVPGDIVEVNV 152 (557)
Q Consensus 98 ~~~~~i~~~~~~~~~~~~~~l~~~~-----~-------~~~~v----~r~g~~~~i~~~~l~~GDIv~l~~ 152 (557)
.+...+......++-+.++++.... . ....+ +.-|....+...|.+|-|.+.++.
T Consensus 136 ~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g 206 (902)
T PRK10517 136 TLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQA 206 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEEEEEc
Confidence 3344555566666666677664321 1 11112 246888999999999999988874
No 65
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=25.93 E-value=46 Score=23.66 Aligned_cols=13 Identities=31% Similarity=0.534 Sum_probs=10.7
Q ss_pred CCCcEEEEcCCCc
Q 008694 143 VPGDIVEVNVGCK 155 (557)
Q Consensus 143 ~~GDIv~l~~g~~ 155 (557)
.+||+|.++-|-.
T Consensus 2 ~~GDvV~LKSGGp 14 (53)
T PF09926_consen 2 KIGDVVQLKSGGP 14 (53)
T ss_pred CCCCEEEEccCCC
Confidence 5899999998853
No 66
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=25.90 E-value=1.1e+03 Score=27.67 Aligned_cols=58 Identities=19% Similarity=0.181 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeCCeEEEeeCCCcCCCcEEEEcCCCccccceEEee
Q 008694 96 ILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIE 164 (557)
Q Consensus 96 ~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDIv~l~~g~~vPaD~ill~ 164 (557)
+++++.+--+...+..++.-.+++++. ++. .+..=++.|-..-|...|.||-|+.++.
T Consensus 220 I~iisv~Si~~sv~e~r~qs~rlr~mv-------~~~----~~V~V~R~g~~~ti~S~eLVPGDil~i~ 277 (1140)
T KOG0208|consen 220 IVIISVYSIVLSVYETRKQSIRLRSMV-------KFT----CPVTVIRDGFWETVDSSELVPGDILYIP 277 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-------cCC----ceEEEEECCEEEEEeccccccccEEEEC
Confidence 334444434455566666666666552 232 3334466799999999999999999986
No 67
>KOG3416 consensus Predicted nucleic acid binding protein [General function prediction only]
Probab=24.96 E-value=45 Score=28.25 Aligned_cols=16 Identities=31% Similarity=0.628 Sum_probs=13.3
Q ss_pred CCcCCCcEEEEcCCCc
Q 008694 140 AELVPGDIVEVNVGCK 155 (557)
Q Consensus 140 ~~l~~GDIv~l~~g~~ 155 (557)
.-+.|||||++..|-.
T Consensus 60 ~~~~PGDIirLt~Gy~ 75 (134)
T KOG3416|consen 60 CLIQPGDIIRLTGGYA 75 (134)
T ss_pred cccCCccEEEecccch
Confidence 3589999999999854
No 68
>PF12791 RsgI_N: Anti-sigma factor N-terminus; InterPro: IPR024449 The heat shock genes in Bacillus subtilis can be classified into several groups according to their regulation [], and the sigma gene, sigI, of Bacillus subtilis belongs to the group IV heat-shock response genes and has many orthologues in the bacterial phylum Firmicutes []. Regulation of sigma factor I is carried out by RsgI from the same operon. This entry represents the N-terminal cytoplasmic portion of RsgI ('upstream' of the single transmembrane helix) which has been shown to interact directly with Sigma-I [].
Probab=24.18 E-value=1.5e+02 Score=21.05 Aligned_cols=35 Identities=23% Similarity=0.237 Sum_probs=26.6
Q ss_pred CeEEEE-eCCeEEEeeCC-CcCCCcEEEEcCCCcccc
Q 008694 124 DIATVL-RNGCFSILPAA-ELVPGDIVEVNVGCKIPA 158 (557)
Q Consensus 124 ~~~~v~-r~g~~~~i~~~-~l~~GDIv~l~~g~~vPa 158 (557)
..+.|+ .||++..|+.. +..+||-|.+...+..+.
T Consensus 6 ~~aiVlT~dGeF~~ik~~~~~~vG~eI~~~~~~~~~~ 42 (56)
T PF12791_consen 6 KYAIVLTPDGEFIKIKRKPGMEVGQEIEFDEKDIINK 42 (56)
T ss_pred CEEEEEcCCCcEEEEeCCCCCcccCEEEEechhhccc
Confidence 345554 68999888854 699999999998887664
No 69
>PRK03187 tgl transglutaminase; Provisional
Probab=24.15 E-value=1.5e+02 Score=28.80 Aligned_cols=28 Identities=21% Similarity=0.224 Sum_probs=21.3
Q ss_pred eCCeEEEeeCCCcCCCcEEEEcCCCccc
Q 008694 130 RNGCFSILPAAELVPGDIVEVNVGCKIP 157 (557)
Q Consensus 130 r~g~~~~i~~~~l~~GDIv~l~~g~~vP 157 (557)
+|.........+..|||.++.+.-|.=|
T Consensus 154 ~dL~i~t~~g~~~~PGD~vYFkNPd~~p 181 (272)
T PRK03187 154 RDLKLITKTGGDFLPGDCVYFKNPDFNP 181 (272)
T ss_pred CCcceEEecCCCCCCCcEEEecCCCCCC
Confidence 3556666677889999999998887654
No 70
>PF13748 ABC_membrane_3: ABC transporter transmembrane region
Probab=23.98 E-value=6.3e+02 Score=24.25 Aligned_cols=37 Identities=11% Similarity=-0.002 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeCC
Q 008694 96 ILAANAAVGVITETNAEKALEELRAYQADIATVLRNG 132 (557)
Q Consensus 96 ~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~v~r~g 132 (557)
+.....++.....++.++...++.+...+.+.+++.+
T Consensus 147 ~l~~~~~i~~~f~~~~~~L~~~LNnrlE~eV~~i~~~ 183 (237)
T PF13748_consen 147 ILALFLLILPRFARRNYRLYRRLNNRLEKEVDIIERR 183 (237)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHhhcC
Confidence 3333344444555566666666666555555555544
No 71
>PRK05886 yajC preprotein translocase subunit YajC; Validated
Probab=23.47 E-value=2.1e+02 Score=23.78 Aligned_cols=15 Identities=13% Similarity=-0.004 Sum_probs=5.8
Q ss_pred hcCCCeEEEEeCCeE
Q 008694 120 AYQADIATVLRNGCF 134 (557)
Q Consensus 120 ~~~~~~~~v~r~g~~ 134 (557)
.+++..-.+.-.|-.
T Consensus 38 ~Lk~GD~VvT~gGi~ 52 (109)
T PRK05886 38 SLQPGDRVHTTSGLQ 52 (109)
T ss_pred hcCCCCEEEECCCeE
Confidence 344333333344443
No 72
>PRK10053 hypothetical protein; Provisional
Probab=22.74 E-value=40 Score=29.00 Aligned_cols=35 Identities=17% Similarity=0.209 Sum_probs=27.9
Q ss_pred HHHHHhcCceeecchhhhhcccccEEEecCCCccC
Q 008694 319 TKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLT 353 (557)
Q Consensus 319 ~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT 353 (557)
+..+..+.-+.-..++...||.=.|+|.|+||+++
T Consensus 55 a~~~~Dd~~V~L~G~Iv~~lg~d~Y~F~D~tG~I~ 89 (130)
T PRK10053 55 AKTMHDGATVSLRGNLIDHKGDDRYVFRDKSGEIN 89 (130)
T ss_pred hhcCcCCCeEEEEEEEEEEeCCceEEEECCCCcEE
Confidence 34455566677788899999999999999999864
No 73
>COG2501 S4-like RNA binding protein [Replication, recombination, and repair]
Probab=22.71 E-value=1.1e+02 Score=23.43 Aligned_cols=26 Identities=31% Similarity=0.336 Sum_probs=23.3
Q ss_pred EEEeCCeEEEeeCCCcCCCcEEEEcC
Q 008694 127 TVLRNGCFSILPAAELVPGDIVEVNV 152 (557)
Q Consensus 127 ~v~r~g~~~~i~~~~l~~GDIv~l~~ 152 (557)
.|..||+...-.-..|+.||+|.+..
T Consensus 38 ~V~vNGe~EtRRgkKlr~gd~V~i~~ 63 (73)
T COG2501 38 EVKVNGEVETRRGKKLRDGDVVEIPG 63 (73)
T ss_pred eEEECCeeeeccCCEeecCCEEEECC
Confidence 68899999999999999999998754
No 74
>KOG1419 consensus Voltage-gated K+ channel KCNQ [Inorganic ion transport and metabolism]
Probab=22.67 E-value=2e+02 Score=30.99 Aligned_cols=24 Identities=17% Similarity=0.343 Sum_probs=14.8
Q ss_pred chhhHHHHHHHHHHHHHHhcCCch
Q 008694 284 FLRGAIHYFKIAVALAVAAIPEGL 307 (557)
Q Consensus 284 ~~~~~~~~~~~~i~~l~~~iP~~l 307 (557)
|..-++...+..+++...+.|.++
T Consensus 294 WlGr~laa~fsligiSFFALPAGI 317 (654)
T KOG1419|consen 294 WLGRLLAACFSLIGISFFALPAGI 317 (654)
T ss_pred chhHHHHHHHHHHHHHHHhccccc
Confidence 444445555566677777777765
No 75
>PRK04980 hypothetical protein; Provisional
Probab=20.72 E-value=1.2e+02 Score=24.90 Aligned_cols=37 Identities=14% Similarity=0.347 Sum_probs=28.3
Q ss_pred CCeEEEEeCCeEEEeeCCCcCCCcEEEEc--CCCccccceEEee
Q 008694 123 ADIATVLRNGCFSILPAAELVPGDIVEVN--VGCKIPADMRMIE 164 (557)
Q Consensus 123 ~~~~~v~r~g~~~~i~~~~l~~GDIv~l~--~g~~vPaD~ill~ 164 (557)
..|..-+|++ .....+|||++.|. .+.+.-|+..+++
T Consensus 18 GkKTiTiRd~-----se~~~~~G~~~~V~~~e~g~~~c~ieI~s 56 (102)
T PRK04980 18 GRKTITIRDE-----SESHFKPGDVLRVGTFEDDRYFCTIEVLS 56 (102)
T ss_pred CCceEEeeCC-----cccCCCCCCEEEEEECCCCcEEEEEEEEE
Confidence 3455556774 25679999999997 7788889999986
No 76
>TIGR00156 conserved hypothetical protein TIGR00156. As of the last revision, this family consists only of two proteins from Escherichia coli and one from the related species Haemophilus influenzae.
Probab=20.57 E-value=49 Score=28.28 Aligned_cols=35 Identities=17% Similarity=0.249 Sum_probs=26.9
Q ss_pred HHHHHhcCceeecchhhhhcccccEEEecCCCccC
Q 008694 319 TKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLT 353 (557)
Q Consensus 319 ~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT 353 (557)
+..+..+.-+.-..++...++.=.|+|.|+||+++
T Consensus 51 a~~~~Ddt~V~L~G~Iv~~l~~d~Y~F~D~TG~I~ 85 (126)
T TIGR00156 51 AKSMHDGASVTLRGNIISHIGDDRYVFRDKSGEIN 85 (126)
T ss_pred HhhCCCCCEEEEEEEEEEEeCCceEEEECCCCCEE
Confidence 34455555566688889999998899999999764
Done!