BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008696
(557 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6P9Q6|FKB15_MOUSE FK506-binding protein 15 OS=Mus musculus GN=Fkbp15 PE=1 SV=2
Length = 1216
Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 127/273 (46%), Gaps = 34/273 (12%)
Query: 254 VVAHLASKIDMKNEDLSELQCKFNETTMSLSRMLEEKDRLHYAFVEETRKMQRLARDNVR 313
V +A K+D + ELQ + +M L M + ET + N++
Sbjct: 520 AVNKVADKMDHLMTKVEELQKHSSGNSMLLPSM---------SVTMETS----MIMSNIQ 566
Query: 314 RILEEQEKLSCELETKKKKLDSWSKQLNKREALTERERQKLDADRQQNDLRNNSLQLASM 373
RI++E E+L EL K +++ +Q +K L ER ++ ++ + RNNSLQ A+
Sbjct: 567 RIIQENERLKQELLEKSSRIE---EQNDKISDLIERNQRYVEQSNLMMEKRNNSLQTAT- 622
Query: 374 EQKKADENVLRLVEEQKREKEE---ALSKILQLEKQLDAKQKLEMEIEDLKGKLEVMKHL 430
+ +L +E+ + EE A +++ L+ ++ A QK E E++ L++ +L
Sbjct: 623 --ENTQARILHAEQEKAKVTEELAAATAQVSHLQLKMTAHQKKETELQ-----LQLTDNL 675
Query: 431 GDEDDAAVQKKMKEMNDELESKIDDLDEMESLNKTLIAKERQSNDELQEARRELIQGLSD 490
+ D ++ L++ + +L E +T E+QS +L+ L + L+D
Sbjct: 676 KETD------LLRGHVTRLQADLSELREASEQTQTKFKSEKQSRRQLELKVTSLEEELTD 729
Query: 491 LIGARTNIGVKRLGEIDPKPFQDACKNKFPLEE 523
L +T++ K L E K Q+ C+ + ++E
Sbjct: 730 LRAEKTSL-EKNLSERKKKSAQERCQAEAEMDE 761
>sp|Q5T1M5|FKB15_HUMAN FK506-binding protein 15 OS=Homo sapiens GN=FKBP15 PE=1 SV=2
Length = 1219
Score = 41.2 bits (95), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 124/272 (45%), Gaps = 51/272 (18%)
Query: 257 HLASKIDMKNEDLSELQCKFNETTMSLSRMLEEKDRLHYAFVEETRKMQ----------- 305
H DM + ++E + E M++S++ ++ D L VEE +K
Sbjct: 497 HFQGSGDMASFLMTEARQHNTEIRMAVSKVADKMDHL-MTKVEELQKHSAGNSMLIPSMS 555
Query: 306 -----RLARDNVRRILEEQEKLSCELETKKKKLDSWSKQLNKREALTERERQKLDADRQQ 360
+ N++RI++E E+L E+ K +++ +Q +K L ER ++ ++
Sbjct: 556 VTMETSMIMSNIQRIIQENERLKQEILEKSNRIE---EQNDKISELIERNQRYVEQSNLM 612
Query: 361 NDLRNNSLQLASMEQKKADENVLRLVEEQKREKEE---ALSKILQLEKQLDAKQKLEMEI 417
+ RNNSLQ A+ + VL +E+ + EE A +++ L+ ++ A QK E E+
Sbjct: 613 MEKRNNSLQTAT---ENTQARVLHAEQEKAKVTEELAAATAQVSHLQLKMTAHQKKETEL 669
Query: 418 ED-----------LKGKL-EVMKHLGDEDDAAVQ-----KKMKEMNDELESKIDDLD--- 457
+ L+G+L +V L + + + Q K K+ +LE K+ L+
Sbjct: 670 QMQLTESLKETDLLRGQLTKVQAKLSELQETSEQAQSKFKSEKQNRKQLELKVTSLEEEL 729
Query: 458 -----EMESLNKTLIAKERQSNDELQEARREL 484
E ESL K L ++++S E +A E+
Sbjct: 730 TDLRVEKESLEKNLSERKKKSAQERSQAEEEI 761
>sp|Q9LDX1|SGS3_ARATH Protein SUPPRESSOR OF GENE SILENCING 3 OS=Arabidopsis thaliana
GN=SGS3 PE=1 SV=1
Length = 625
Score = 40.0 bits (92), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 102/436 (23%), Positives = 182/436 (41%), Gaps = 77/436 (17%)
Query: 42 CPFC-SGKKKQD-YKHKDLLQHASGVGKGSANRSAKQKANHLALAKYLEVDLA--GGVDK 97
CP C +G D Y LL HA G A++ H LA+ LE DL G
Sbjct: 228 CPACQNGPGAIDWYNLHPLLAHARTKG-------ARRVKLHRELAEVLEKDLQMRGASVI 280
Query: 98 PQRPVLPQPVNQNPEQEDL-YVWPWMGIIVNIVMETKDRGSFLDSGY--WLKRFAVFKPV 154
P + Q +++D VWP M II+N ++ D +L G L+ F ++ +
Sbjct: 281 PCGEIYGQWKGLGEDEKDYEIVWPPMVIIMNTRLDKDDNDKWLGMGNQELLEYFDKYEAL 340
Query: 155 EVRIFWNEENPTAQAVVKFNNDWNGFMQASDFEKAFDADHQGKRHWIARKE--SPGLR-I 211
R + + +V+ F + G+++A + + W ++ S G+R +
Sbjct: 341 RARHSYGPQGHRGMSVLMFESSATGYLEAERLHRELAEMGLDRIAWGQKRSMFSGGVRQL 400
Query: 212 YGWFARADDNTSEGPIGEYLRQEGKLRTVSDIVQEDAQSKIHVVAHLASKIDMKNEDL-- 269
YG+ A D DI + +Q K + L S +M ++L
Sbjct: 401 YGFLATKQD--------------------LDIFNQHSQGKTRLKFELKSYQEMVVKELRQ 440
Query: 270 -SELQCKFNETTMSLSRMLEEKDRLHYAFVEETRKMQRLARDNVRRILEEQEKLSCELET 328
SE + N LS+ + L + + K++R A DN RI+ ++ K+ + E
Sbjct: 441 ISEDNQQLNYFKNKLSKQNKHAKVLEESLEIMSEKLRRTAEDN--RIVRQRTKM--QHEQ 496
Query: 329 KKKKLDSWS-------KQLNKR--------EALTERERQKLDADRQQNDLRNNSLQLASM 373
++++D+ KQ+++R E L ++ER K+ +QQN N S ++
Sbjct: 497 NREEMDAHDRFFMDSIKQIHERRDAKEENFEMLQQQERAKVVGQQQQNI--NPS---SND 551
Query: 374 EQKKADENVLRLVEEQKREKEEALSKILQLEKQLDAKQKLEMEIEDLKGKLEVMKHLGDE 433
+ +K E V +E Q ++ + ++ EM I+D + K+E MK E
Sbjct: 552 DCRKRAEEVSSFIE-------------FQEKEMEEFVEEREMLIKDQEKKMEDMKKRHHE 598
Query: 434 DDAAVQKKMKEMNDEL 449
+ ++K+ E ++L
Sbjct: 599 EIFDLEKEFDEALEQL 614
>sp|P53564|CUX1_MOUSE Homeobox protein cut-like 1 OS=Mus musculus GN=Cux1 PE=1 SV=3
Length = 1515
Score = 36.6 bits (83), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 83/193 (43%), Gaps = 37/193 (19%)
Query: 268 DLSELQCKFNETTMSLSRMLEEKDRLHYAFVEETRKMQRLARDNVRRILEEQEKLSCELE 327
D +E + K ET MS + LEE + K + D + EE + E+E
Sbjct: 171 DFAEKERKLQETQMSTTSKLEEAEHKLQTLQTALEKTRTELFDLKTKYDEETTAKADEIE 230
Query: 328 TKKKKLDSWSKQLNKREALTERERQKLDADRQQNDLRNNSLQLASMEQKKAD-------- 379
L+ + N+R + +RE + L R+Q N+SLQLAS QK D
Sbjct: 231 MIMTDLE----RANQRAEVAQREAETL---REQLSSANHSLQLASQIQKAPDVAIEVLTR 283
Query: 380 ------------------ENVLRLVEEQKREKEEALSKILQLEKQLDAKQKLEMEIED-L 420
E+V RL + +E + S+I QLE+QL+AK ++E+ L
Sbjct: 284 SSLEVELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLNAKNSTLKQLEEKL 343
Query: 421 KGKL---EVMKHL 430
KG+ EV K L
Sbjct: 344 KGQADYEEVKKEL 356
>sp|Q9Y623|MYH4_HUMAN Myosin-4 OS=Homo sapiens GN=MYH4 PE=1 SV=2
Length = 1939
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 87/163 (53%), Gaps = 14/163 (8%)
Query: 317 EEQEKLSCELETKKKKLDSWSKQLNKREALTERERQKLDADRQ--QNDLRNNSLQLASME 374
E++E+++ EL KK+KL+ +L K E K++ ++ +N ++N + ++A +
Sbjct: 931 EDEEEINAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMAGL- 989
Query: 375 QKKADENVLRLVEEQKREKEEALSKI--LQLEKQ-----LDAKQKLEMEIEDLKGKLEVM 427
DE + +L +E+K +E + LQ+E+ AK KLE +++DL+G LE
Sbjct: 990 ----DETIAKLTKEKKALQEAHQQTLDDLQMEEDKVNTLTKAKTKLEQQVDDLEGSLEQE 1045
Query: 428 KHLGDEDDAAVQKKMKEMNDELESKIDDLDEMESLNKTLIAKE 470
K L + + A +K ++ ES +D ++ + LN+ L KE
Sbjct: 1046 KKLCMDLERAKRKLEGDLKLAQESTMDTENDKQQLNEKLKKKE 1088
>sp|Q8TZY2|SMC_PYRFU Chromosome partition protein Smc OS=Pyrococcus furiosus (strain
ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=smc PE=1 SV=2
Length = 1177
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 258 LASKIDMKNEDLSELQCKFNETTMSLSRMLEEKDRLHYAFVEETRKMQRLARDNVRRILE 317
L ++I K E+ + L K E + EE D + E TRKM + N+RR+ E
Sbjct: 359 LINEIKKKEEERNVLVVKLGEIDKTFGAAREEFDSVVKELEETTRKMYEI-EGNIRRLQE 417
Query: 318 EQEKLSCELETKKKKLDSWSKQLNKREALTERERQKL 354
E+EKL + + KL +++N+ +A+ E +R ++
Sbjct: 418 EKEKLHSRILFLRAKLPGIKEKINEFKAVVEDKRAEI 454
>sp|Q90339|MYSS_CYPCA Myosin heavy chain, fast skeletal muscle OS=Cyprinus carpio PE=2 SV=2
Length = 1935
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 316 LEEQEKLSCELETKKKKLDSWSKQLNKREALTERERQKLDADRQ--QNDLRNNSLQLASM 373
LE++E+++ EL KK+KL+ +L K E K++ ++ +N ++N + ++AS
Sbjct: 927 LEDEEEINAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMASQ 986
Query: 374 EQKKADENVLRLVEEQKREKEEALSKILQLEKQLD-------AKQKLEMEIEDLKGKLEV 426
DE++ +L +E+K +E + L+ + D AK KLE +++DL+G LE
Sbjct: 987 -----DESIAKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQVDDLEGSLEQ 1041
Query: 427 MKHL 430
K L
Sbjct: 1042 EKKL 1045
>sp|P21249|ANT1_ONCVO Major antigen OS=Onchocerca volvulus GN=OVT1 PE=2 SV=2
Length = 2022
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 109/212 (51%), Gaps = 26/212 (12%)
Query: 308 ARDN--VRRILEEQEKLSCELETKKKKLDSWSKQLNKREA-----LTERERQKLDADRQQ 360
A DN ++R L+ E EL TK L+ ++L KR A +T R+R+ DA
Sbjct: 422 ANDNNVLQRKLKNAEVQISELTTKNDSLEEIRRRLEKRIAEANRTITHRQRELDDAKHTV 481
Query: 361 NDLRNNSLQLASMEQKKADENVLR--LVEEQKREKEEALSKILQLEKQL--DAKQKL--- 413
DL + +L S+EQ+KA + R L +E ++ +E+ S +L +E++ DA +++
Sbjct: 482 KDLED---RLKSLEQEKASIDSARHHLEDEIRKMREQFNSTLLDVERRAAEDADERIRKI 538
Query: 414 ----EMEIEDLKGKLEVM----KHLGDEDDAAVQKKMKEMNDELESKIDDLDEMESLNKT 465
++ I +L ++E++ K L DE+D ++ +++++ E + I L+E ++ K
Sbjct: 539 DEETKIRISELTNRIEMLLEENKRLKDENDG-MKNRIQDIEKEYNTIIRKLEEKDNALKN 597
Query: 466 LIAKERQSNDELQEARRELIQGLSDLIGARTN 497
L ++ +EL+E R S+ RTN
Sbjct: 598 LENTRQRLVNELEEQRTRFDTMTSEFDNLRTN 629
>sp|P13542|MYH8_MOUSE Myosin-8 OS=Mus musculus GN=Myh8 PE=1 SV=2
Length = 1937
Score = 34.7 bits (78), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 67/123 (54%), Gaps = 14/123 (11%)
Query: 317 EEQEKLSCELETKKKKLDSWSKQLNKREALTERERQKLDADRQ--QNDLRNNSLQLASME 374
E++E+++ EL KK+KL+ +L K E K++ ++ +N ++N + ++A +
Sbjct: 930 EDEEEINAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMAGL- 988
Query: 375 QKKADENVLRLVEEQKREKEEALSKILQLEKQLD-------AKQKLEMEIEDLKGKLEVM 427
DEN+ +L +E+K +E + L+ + D AK KLE +++DL+G LE
Sbjct: 989 ----DENIAKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQVDDLEGSLEQE 1044
Query: 428 KHL 430
K L
Sbjct: 1045 KKL 1047
>sp|Q08014|MEDB_GIAIN Median body protein OS=Giardia intestinalis PE=2 SV=1
Length = 857
Score = 33.9 bits (76), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 80/146 (54%), Gaps = 16/146 (10%)
Query: 316 LEEQEKLSCELET-------KKKKLDSWSKQLNKREALTERERQK-LDADRQQNDLRNNS 367
LE+Q++ + ET K +LD ++++ RE R K L++D+ + D R +
Sbjct: 605 LEQQQRTATVRETEMSALREKANELDGYNRERQAREHEINMLRDKALESDKLRQDNRVMA 664
Query: 368 LQLASMEQKKADENVLRLVEEQKREKE----EALSKILQLEKQLDAKQKLEMEIEDLKGK 423
++L + +K +L ++ +KR ++ E K + ++ ++ KQ+LEM + +LK K
Sbjct: 665 MELTELREKV---QLLEKLQYEKRARDVEMLELRHKAMDVDTLVEEKQRLEMRLAELKIK 721
Query: 424 LEVMKHLGDEDDAAVQKKMKEMNDEL 449
+ L D D A +Q+++KEM+D+L
Sbjct: 722 VNNYDQLAD-DKARLQEQLKEMSDKL 746
>sp|Q9BE41|MYH2_BOVIN Myosin-2 OS=Bos taurus GN=MYH2 PE=2 SV=1
Length = 1940
Score = 33.1 bits (74), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 86/163 (52%), Gaps = 14/163 (8%)
Query: 317 EEQEKLSCELETKKKKLDSWSKQLNKREALTERERQKLDADRQ--QNDLRNNSLQLASME 374
E++E+++ EL KK+KL+ +L K E K++ ++ +N ++N + ++A +
Sbjct: 932 EDEEEINAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMAGL- 990
Query: 375 QKKADENVLRLVEEQKREKEEALSKILQLEKQLD-------AKQKLEMEIEDLKGKLEVM 427
DE + +L +E+K +E + L+ + D AK KLE +++DL+G LE
Sbjct: 991 ----DETIAKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQVDDLEGSLEQE 1046
Query: 428 KHLGDEDDAAVQKKMKEMNDELESKIDDLDEMESLNKTLIAKE 470
K L + + A +K ++ ES +D +E + L++ L KE
Sbjct: 1047 KKLRMDLERAKRKLEGDLKLAQESIMDIENEKQQLDEKLKKKE 1089
>sp|Q8MJV1|MYH2_HORSE Myosin-2 OS=Equus caballus GN=MYH2 PE=2 SV=1
Length = 1937
Score = 32.7 bits (73), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 86/163 (52%), Gaps = 14/163 (8%)
Query: 317 EEQEKLSCELETKKKKLDSWSKQLNKREALTERERQKLDADRQ--QNDLRNNSLQLASME 374
E++E+++ EL KK+KL+ +L K E K++ ++ +N ++N + ++A +
Sbjct: 929 EDEEEINAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMAGL- 987
Query: 375 QKKADENVLRLVEEQKREKEEALSKILQLEKQLD-------AKQKLEMEIEDLKGKLEVM 427
DE + +L +E+K +E + L+ + D AK KLE +++DL+G LE
Sbjct: 988 ----DETIAKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQVDDLEGSLEQE 1043
Query: 428 KHLGDEDDAAVQKKMKEMNDELESKIDDLDEMESLNKTLIAKE 470
K L + + A +K ++ ES +D +E + L++ L KE
Sbjct: 1044 KKLRMDLERAKRKLEGDLKLAQESIMDIENEKQQLDEKLKKKE 1086
>sp|Q9TV63|MYH2_PIG Myosin-2 OS=Sus scrofa GN=MYH2 PE=2 SV=1
Length = 1939
Score = 32.7 bits (73), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 86/163 (52%), Gaps = 14/163 (8%)
Query: 317 EEQEKLSCELETKKKKLDSWSKQLNKREALTERERQKLDADRQ--QNDLRNNSLQLASME 374
E++E+++ EL KK+KL+ +L K E K++ ++ +N ++N + ++A +
Sbjct: 931 EDEEEINAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMAGL- 989
Query: 375 QKKADENVLRLVEEQKREKEEALSKILQLEKQLD-------AKQKLEMEIEDLKGKLEVM 427
DE + +L +E+K +E + L+ + D AK KLE +++DL+G LE
Sbjct: 990 ----DETIAKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQVDDLEGSLEQE 1045
Query: 428 KHLGDEDDAAVQKKMKEMNDELESKIDDLDEMESLNKTLIAKE 470
K L + + A +K ++ ES +D +E + L++ L KE
Sbjct: 1046 KKLRMDLERAKRKLEGDLKLAQESIMDIENEKQQLDEKLKKKE 1088
>sp|Q9TV62|MYH4_PIG Myosin-4 OS=Sus scrofa GN=MYH4 PE=2 SV=1
Length = 1937
Score = 32.7 bits (73), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 96/201 (47%), Gaps = 30/201 (14%)
Query: 255 VAHLASKIDMKNEDLSELQCKFNETTMSLSRMLEEKDRLHYAFVEET------------- 301
+A++ + + EDL++ + K E + +++EK+ L E
Sbjct: 851 MANMKEEFEKTKEDLAKSEAKRKELEEKMVALMQEKNDLQLQVQAEADGLADAEERCDQL 910
Query: 302 --RKMQRLAR-DNVRRILEEQEKLSCELETKKKKLDSWSKQLNKREALTERERQKLDADR 358
K+Q A+ V E++E+++ EL KK+KL+ +L K E K++ ++
Sbjct: 911 IKTKIQLEAKIKEVTERAEDEEEINAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEK 970
Query: 359 Q--QNDLRNNSLQLASMEQKKADENVLRLVEEQKREKEEALSKILQLEKQLD-------A 409
+N ++N + ++A + DEN+ +L +E+K +E + L+ + D A
Sbjct: 971 HATENKVKNLTEEMAGL-----DENIAKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKA 1025
Query: 410 KQKLEMEIEDLKGKLEVMKHL 430
K KLE +++DL+G LE K L
Sbjct: 1026 KTKLEQQVDDLEGSLEQEKKL 1046
>sp|C5DY19|SP110_ZYGRC Spindle pole body component 110 OS=Zygosaccharomyces rouxii (strain
ATCC 2623 / CBS 732 / NBRC 1130 / NCYC 568 / NRRL Y-229)
GN=SPC110 PE=3 SV=1
Length = 835
Score = 32.3 bits (72), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 6/115 (5%)
Query: 310 DNVRRILEEQEKLSCELETKKKKLDSWSKQLNKREALTERERQKLDADRQQNDLRNNSLQ 369
D VR + EE+ L+ + +K+ D W + + E+L R+ D+ RQ+ L+ Q
Sbjct: 391 DKVRNLTEERHNLNQRISALRKECDEWKSKYQRNESLDSNHRKAFDSLRQE--LQTTKTQ 448
Query: 370 LASMEQKKADENVLRLVEEQKREKEEALSKILQLEKQLDAKQKLEMEIEDLKGKL 424
L +K A + +++E + E +I E Q+ QKLE E++ K +L
Sbjct: 449 LEET-RKTAQQLQTQVIENTTKNSERTSQRIKDKETQI---QKLESELQFCKQQL 499
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.130 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 207,999,659
Number of Sequences: 539616
Number of extensions: 9299202
Number of successful extensions: 61958
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 592
Number of HSP's successfully gapped in prelim test: 3793
Number of HSP's that attempted gapping in prelim test: 42173
Number of HSP's gapped (non-prelim): 13206
length of query: 557
length of database: 191,569,459
effective HSP length: 123
effective length of query: 434
effective length of database: 125,196,691
effective search space: 54335363894
effective search space used: 54335363894
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)