Query 008699
Match_columns 557
No_of_seqs 219 out of 475
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 09:40:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008699.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008699hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1v7w_A Chitobiose phosphorylas 99.9 1.1E-26 3.9E-31 261.0 16.9 289 202-550 344-656 (807)
2 3qde_A Cellobiose phosphorylas 99.9 1.8E-25 6.1E-30 253.8 22.0 260 203-539 356-654 (811)
3 3rrs_A Cellobiose phosphorylas 99.9 5.6E-25 1.9E-29 250.1 21.4 264 203-539 363-667 (822)
4 3c68_A Uncharacterized protein 99.9 3.1E-23 1.1E-27 234.2 26.3 319 160-549 279-699 (761)
5 2z07_A Putative uncharacterize 99.9 1.6E-23 5.6E-28 218.5 21.8 295 162-550 2-369 (420)
6 2jg0_A Periplasmic trehalase; 99.9 1.4E-22 4.9E-27 220.6 18.7 253 198-550 121-437 (535)
7 2okx_A Rhamnosidase B; alpha b 99.8 3.1E-17 1.1E-21 188.8 24.2 265 159-550 544-814 (956)
8 3cih_A Putative alpha-rhamnosi 99.7 1.3E-16 4.4E-21 179.0 22.8 230 159-492 309-547 (739)
9 1ulv_A Glucodextranase; GH fam 99.3 3.4E-11 1.2E-15 140.1 20.7 197 160-407 281-485 (1020)
10 1lf6_A Glucoamylase; (alpha/al 99.1 8.3E-10 2.8E-14 123.3 18.3 192 160-406 293-492 (684)
11 3qry_B Putative uncharacterize 98.7 1.4E-06 4.7E-11 92.8 20.6 240 160-422 24-293 (426)
12 3qt9_A Putative uncharacterize 98.6 1.2E-06 4.3E-11 93.2 18.3 239 160-422 27-293 (427)
13 2p0v_A Hypothetical protein BT 98.6 1.8E-06 6.3E-11 93.3 19.4 240 160-422 71-339 (489)
14 3p2c_A Putative glycosyl hydro 98.4 3.7E-06 1.3E-10 90.3 17.1 241 160-422 49-321 (463)
15 2fba_A Glucoamylase Glu1; (alp 98.1 0.00019 6.6E-09 77.7 21.0 196 180-405 45-266 (492)
16 2vn4_A Glucoamylase; hydrolase 97.9 0.00094 3.2E-08 74.0 23.2 186 181-406 30-230 (599)
17 1gai_A Glucoamylase-471; hydro 97.9 0.0011 3.8E-08 71.5 22.8 181 181-405 31-228 (472)
18 2rdy_A BH0842 protein; PSI-II, 86.3 1.6 5.3E-05 49.9 8.6 99 291-391 450-556 (803)
19 2eab_A Alpha-fucosidase; glyco 83.9 2 6.7E-05 49.9 8.0 38 290-329 507-544 (899)
20 1h54_A Maltose phosphorylase; 78.9 8.7 0.0003 43.6 10.9 85 291-377 429-515 (754)
21 2zzr_A Unsaturated glucuronyl 34.2 4E+02 0.014 27.8 12.7 121 166-312 137-269 (397)
22 3k11_A Putative glycosyl hydro 30.6 66 0.0023 34.3 6.2 33 473-508 22-54 (445)
23 2ooa_A E3 ubiquitin-protein li 24.1 73 0.0025 24.7 3.6 27 204-231 23-49 (52)
24 1dl2_A Class I alpha-1,2-manno 22.0 2.1E+02 0.0072 31.1 8.2 145 162-329 124-277 (511)
25 2d9s_A CBL E3 ubiquitin protei 21.6 87 0.003 24.3 3.6 28 204-232 21-48 (53)
26 1w6k_A Lanosterol synthase; cy 20.5 9.3E+02 0.032 26.9 14.3 128 163-329 356-492 (732)
No 1
>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A*
Probab=99.94 E-value=1.1e-26 Score=261.01 Aligned_cols=289 Identities=15% Similarity=0.102 Sum_probs=198.0
Q ss_pred ccch-hhhHHHHHHHHccCCHHHHHHHHHHHHhhhhhhhhcCCCCCCCC-CCCCcceeecccCCCCCCCccc------cc
Q 008699 202 QVFI-RDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQG-LMPASFKVRTVPLDGDDSATEE------VL 273 (557)
Q Consensus 202 ~vfg-RDt~ISllglL~~G~peiar~~L~~~~~Lqs~~~~~d~~~~~~G-liP~sfKv~h~~~r~~~~~~e~------~l 273 (557)
..|| ||++|++++++ .++|+++|++|+.++..|. .+| ++|..+...+++.. |+. .+
T Consensus 344 ~~~G~RD~~~~~~~l~-~~~p~~ar~~l~~~~~~Q~----------~~G~~~p~~~p~~~~~~~-----g~~~~~~~~~~ 407 (807)
T 1v7w_A 344 TGLGYRDTAQDAISVP-HANPEMTRKRIVDLLRGQV----------KAGYGLHLFDPDWFDPEK-----EDVAPSKSPTV 407 (807)
T ss_dssp CSEEHHHHHHHTTSCT-TTCHHHHHHHHHHHHHTBC----------TTSCBCSEECGGGGCC------------------
T ss_pred CccCchHHhHHHHHHh-hcCHHHHHHHHHHHHhccc----------cCCCcceeeeeccccccc-----cccCCcccccc
Confidence 4699 99999999966 8899999999988887665 445 56764311121100 100 00
Q ss_pred CCCCCCCc--cC-ccCCCCcHHHHHHHHHHHHHHhCChhhHhhhhHHH-----------HHHHHHHHHHhCCCCCCCcce
Q 008699 274 DPDFGEAA--IG-RVAPVDSGLWWIILLRAYGKCSGDLLVQERIDVQT-----------GIKMILKLCLADGFDMFPTLL 339 (557)
Q Consensus 274 ~ad~Ge~a--ig-~y~sVDAtLWfIial~~Y~k~TGD~sf~~~~e~~~-----------~ik~IL~~~~~~~f~~~p~lL 339 (557)
+++.|+.. ++ +....|+++||++++++|+++|||.+|++ ++.+ +++.+++++... ..++++
T Consensus 408 ~g~~~~~~~~~g~~~~~~D~~lw~~~~~~~y~~~tGD~~~L~--e~~p~~~~~~~~v~e~~~~~~~~~~~~---~~~~GL 482 (807)
T 1v7w_A 408 VPTPSDEDKIHGIKDTCSDDHLWLIPTICKYVMETGETSFFD--QMIPYADGGEASVYEHMKAALDFSAEY---VGQTGI 482 (807)
T ss_dssp ---------CCCGGGCBSSGGGGHHHHHHHHHHHHCCGGGGG--CEEECTTSCEEEHHHHHHHHHHHHHHS---BCTTSC
T ss_pred ccCCCcchhhcCCCCCccchhhHHHHHHHHHHHHhCCHHHHh--cccccccCCcchHHHHHHHHHHHHHhc---CCCCCC
Confidence 01112111 11 12334999999999999999999999985 3433 688999998762 223455
Q ss_pred ec-CCCcccccccC-CCCCceeehHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhhccccccchhhhhhcc
Q 008699 340 VT-DGSCMIDRRMG-IHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYK 417 (557)
Q Consensus 340 v~-dG~~wmD~r~p-R~G~PVEIQALwYnALr~a~~L~~~~~~~~~~~~~l~~ra~~L~~~f~~~FW~d~~~l~~i~r~~ 417 (557)
+. ...+|.|. |. ..|.+||+|||||.||+.+++|++. .++.+.++++.+++++|++.|+++||.+..+. |.
T Consensus 483 ~~~~~~DW~D~-~~~~~g~~v~~~a~~y~al~~~a~la~~-lG~~~~a~~~~~~A~~lk~~~~~~~w~~~~~~---f~-- 555 (807)
T 1v7w_A 483 CKGLRADWNDC-LNLGGGESSMVSFLHFWALQEFIDLAKF-LGKDQDVNTYTEMAANVREACETHLWDDEGGW---YI-- 555 (807)
T ss_dssp BEEETCSSSTT-CCCEEEEEHHHHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHHHHHSEETTTTE---EC--
T ss_pred cccCCCCCCCc-CCCCCCeehhHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHhccCCCCCe---ee--
Confidence 43 34688776 42 3789999999999999999999987 46677788899999999999999999753211 10
Q ss_pred ccccchhhhhccCCCCCCCCcccccccCCCCceeeccccCCccccccccccchhhhhcCCCCHHHHHHHHHHHHHhhhhh
Q 008699 418 TEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIGNLQPAHMDFRFFSLGNIWSIVNGLATRDQSHAILDLMEAKWADL 497 (557)
Q Consensus 418 ~e~y~~~avn~fni~pd~ipd~L~d~~~~~ggYl~gnv~P~~~D~R~falGNlLAl~~gLl~~eqa~aVld~v~~~~~eL 497 (557)
..| ..+|.. +|+. ...+.++++.+|.+|+++++++++|++++++.|.+ +|
T Consensus 556 -~~~-----------------------~~d~~~-~g~~--~~~~~~~~~~~~~~al~~g~~~~e~a~~~l~~v~~---~L 605 (807)
T 1v7w_A 556 -RGL-----------------------TKNGDK-IGTA--QQQEGRVHLESNTLAVLSGLASQERGEQAMDAVDE---HL 605 (807)
T ss_dssp -CEE-----------------------CTTSCE-ESCT--TCSSCCEEHHHHHHHHHTTCSCHHHHHHHHHHHHH---HH
T ss_pred -eee-----------------------ccCCCC-cCCc--cCCCCcCcccchHHHHhhCCCCHHHHHHHHHHHHH---hc
Confidence 000 000000 1111 11123577788999999999999999999999998 89
Q ss_pred hccCCccccCCCCCCCCceeeeCCCCCCCCCccccCCcchhhhHHHHHHHHHh
Q 008699 498 VADMPLKICYPALEGQEWQIITGSDPKNTPWSYHNAGSWPTLLWQVSHGSIVG 550 (557)
Q Consensus 498 ltp~pLRsl~P~i~d~~Wr~~t~gd~knrp~SYHNGgvWPwLLg~y~~A~lk~ 550 (557)
++|.|+|+++|+... +....++-..+.|..||||++||+-...++.|+.|.
T Consensus 606 ~~~~G~~~~~p~~~~--~~~~~g~~~~y~~~~~enG~~~~~~~~w~~~al~~~ 656 (807)
T 1v7w_A 606 FSPYGLHLNAPSFST--PNDDIGFVTRVYQGVKENGAIFSHPNPWAWVAETKL 656 (807)
T ss_dssp EETTEECSEESCCCS--CCTTTCGGGGSCTTBTTBTSEESTTHHHHHHHHHHT
T ss_pred CCCCceeecCCcccc--cCcCCceeeccCCccccccccccchHHHHHHHHHHc
Confidence 999999999996432 111112223466788999999999877777777664
No 2
>3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum}
Probab=99.93 E-value=1.8e-25 Score=253.78 Aligned_cols=260 Identities=17% Similarity=0.133 Sum_probs=189.8
Q ss_pred cch-hhhHHHHHHHHccCCHHHHHHHHHHHHhhhhhhhhcCCCCCCCCCCCCcceeecccCCCCCCCcccccCCCCCCCc
Q 008699 203 VFI-RDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAA 281 (557)
Q Consensus 203 vfg-RDt~ISllglL~~G~peiar~~L~~~~~Lqs~~~~~d~~~~~~GliP~sfKv~h~~~r~~~~~~e~~l~ad~Ge~a 281 (557)
-|| ||.+.-+++++.. +||++|..|+.++..|. .+|.+|..+ . |.. ..|...
T Consensus 356 ~~G~RD~~qd~~~~~~~-~p~~~r~~il~~~~~Q~----------~dG~~~h~~--~--p~~------------~~g~~~ 408 (811)
T 3qde_A 356 GMGFRDSNQDLLGFVHQ-IPERARERLLDLAATQL----------EDGSAYHQY--Q--PLT------------KKGNNE 408 (811)
T ss_dssp CEEHHHHHHHHHTTTTT-CHHHHHHHHHHHHTTBC----------TTSCBCSEE--C--TTT------------CCEECT
T ss_pred CCccHHHHHHHHHHHhc-CHHHHHHHHHHHHhhcc----------cCCCcccee--c--CCC------------CCCCCC
Confidence 566 9999999998755 89999999987766543 779999855 2 100 011111
Q ss_pred cCccCCCCcHHHHHHHHHHHHHHhCChhhHhh-----------hhHHHHHHHHHHHHHhCCCCCCCcceecC-CCccccc
Q 008699 282 IGRVAPVDSGLWWIILLRAYGKCSGDLLVQER-----------IDVQTGIKMILKLCLADGFDMFPTLLVTD-GSCMIDR 349 (557)
Q Consensus 282 ig~y~sVDAtLWfIial~~Y~k~TGD~sf~~~-----------~e~~~~ik~IL~~~~~~~f~~~p~lLv~d-G~~wmD~ 349 (557)
+ ....+|.+||+|+++++|++.|||.+|++. ..+.++++..+++.... ..+.+|..- ..+|+|.
T Consensus 409 ~-~~~~~D~~lW~i~av~~Y~~~TGD~~~L~e~~p~~~~~~~~~tl~eh~~ra~~~~~~~---~g~~GL~~~g~~DWnD~ 484 (811)
T 3qde_A 409 I-GSNFNDDPLWLILATAAYIKETGDYSILKEQVPFNNDPSKADTMFEHLTRSFYHVVNN---LGPHGLPLIGRADWNDC 484 (811)
T ss_dssp T-CCCBTTHHHHHHHHHHHHHHHHCCGGGGGSEEEETTEEEEEEEHHHHHHHHHHHHHTC---BCTTSSBBCBTCSSSTT
T ss_pred C-CCCcccchhHHHHHHHHHHHHHCCHHHHHhhhhhhcCCcccccHHHHHHHHHHHHHhc---CCCCCCcccccCCchhh
Confidence 1 145699999999999999999999999841 13567888888887742 223444433 4678886
Q ss_pred c--------c-----------CCCCCceeehHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhhccccccch
Q 008699 350 R--------M-----------GIHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKL 410 (557)
Q Consensus 350 r--------~-----------pR~G~PVEIQALwYnALr~a~~L~~~~~~~~~~~~~l~~ra~~L~~~f~~~FW~d~~~l 410 (557)
. + ++.|.+||+++|||+||+.+++|++. .++.+.++++.++++.|++.|+++||.. +.
T Consensus 485 ln~~~~~~~vg~~~~~vtp~~~~~gesv~~~al~y~AL~~~a~lA~~-lGd~~~A~~~~~~A~~lk~a~~~~~Wdg-~~- 561 (811)
T 3qde_A 485 LNLNCFSTVPDESFQTTTSKDGKVAESVMIAGMFVFIGKDYVKLCEY-MGLEEEARKAQQHIDAMKEAILKYGYDG-EW- 561 (811)
T ss_dssp CCSSCCCCCTTSCTTTSCCCCCSSCEEHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHHHHSBCS-SS-
T ss_pred ccccccccccCccccccccccCCcccCHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHhccCc-Ce-
Confidence 2 1 26789999999999999999999998 4667888999999999999999999932 11
Q ss_pred hhhhhccccccchhhhhccCCCCCCCCcccccccCCCCceeecc--ccCCccccccccccchhhhhcCCCCHH-HHHHHH
Q 008699 411 NEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIGN--LQPAHMDFRFFSLGNIWSIVNGLATRD-QSHAIL 487 (557)
Q Consensus 411 ~~i~r~~~e~y~~~avn~fni~pd~ipd~L~d~~~~~ggYl~gn--v~P~~~D~R~falGNlLAl~~gLl~~e-qa~aVl 487 (557)
|+ +.+..+| --+|+ .+++ ++++.++.+|+++++++++ |++++|
T Consensus 562 ---y~--------------------------ra~~~dg-~~~gs~~~~~~----qi~~~~q~~avlsGia~~e~ra~~~m 607 (811)
T 3qde_A 562 ---FL--------------------------RAYDDFG-RKVGSKENEEG----KIFIESQGFCVMAEIGLEDGKALKAL 607 (811)
T ss_dssp ---BC--------------------------CEECTTS-CEESSTTSSSC----CEESHHHHHHHHTTCSSSSSHHHHHH
T ss_pred ---EE--------------------------EEEcCCC-CCCCccCCCCc----eEEecchhHHHHhCCCCchHHHHHHH
Confidence 11 1111111 11111 1244 4678888899999999999 999999
Q ss_pred HHHHHhhhhhhccCCccccCCCCC----CCCceeeeCCCCCCCCCccccCCcchhh
Q 008699 488 DLMEAKWADLVADMPLKICYPALE----GQEWQIITGSDPKNTPWSYHNAGSWPTL 539 (557)
Q Consensus 488 d~v~~~~~eLltp~pLRsl~P~i~----d~~Wr~~t~gd~knrp~SYHNGgvWPwL 539 (557)
+.|.+ +|++|+|||+++||.. +++|.. .+.|.+||||++||--
T Consensus 608 ~~v~~---~L~t~~Glrll~p~f~~~~~d~g~~~------~Y~pg~~enG~iy~H~ 654 (811)
T 3qde_A 608 DSVKK---YLDTPYGLVLQNPAFTRYYIEYGEIS------TYPPGYKENAGIFCHN 654 (811)
T ss_dssp HHHHH---HHCCTTCCCSEESCCCSCCTTTGGGG------TSCTTSTTTTCEEHHH
T ss_pred HHHHH---HhCCCcceEeecCCccccCCCCCcee------ccCCCccccccccchH
Confidence 99998 9999999999999744 333333 3567788888888844
No 3
>3rrs_A Cellobiose phosphorylase; GH94, alpha barrel, disaccharide phosphorylase, transferase; 1.70A {Cellulomonas uda} PDB: 3rsy_A* 3s4a_A* 3s4b_A* 3s4c_A* 3s4d_A* 2cqs_A* 2cqt_A* 3qfy_A* 3qfz_A* 3qg0_A* 3act_A* 3acs_A* 3afj_A*
Probab=99.93 E-value=5.6e-25 Score=250.08 Aligned_cols=264 Identities=19% Similarity=0.168 Sum_probs=188.4
Q ss_pred cch-hhhHHHHHHHHccCCHHHHHHHHHHHHhhhhhhhhcCCCCCCCCCCCCcceeecccCCCCCCCcccccCCCCCCCc
Q 008699 203 VFI-RDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAA 281 (557)
Q Consensus 203 vfg-RDt~ISllglL~~G~peiar~~L~~~~~Lqs~~~~~d~~~~~~GliP~sfKv~h~~~r~~~~~~e~~l~ad~Ge~a 281 (557)
-|| ||.+.-+++++.. +||++|..|+.++..|. .+|.+|..+ . |.. ..|...
T Consensus 363 ~~G~RD~~qd~~~~~~~-~pe~ar~~il~~~~~Q~----------~dG~v~h~~--~--p~~------------~~g~~~ 415 (822)
T 3rrs_A 363 GMGFRDSNQDLLGFVHL-IPERARERIIDIASTQF----------ADGSAYHQY--Q--PLT------------KRGNND 415 (822)
T ss_dssp CEEHHHHHHHHHHHTTT-CHHHHHHHHHHHHTTCC----------TTSCCCSEE--E--TTT------------TEECTT
T ss_pred CCchHHHHHHHHHHHhc-CHHHHHHHHHHHHHhhc----------ccCccccee--c--CcC------------CCCccC
Confidence 466 9999999998754 89999999977766443 789999855 2 100 001111
Q ss_pred cCccCCCCcHHHHHHHHHHHHHHhCChhhHhh-----------hhHHHHHHHHHHHHHhCCCCCCCcceecC-CCccccc
Q 008699 282 IGRVAPVDSGLWWIILLRAYGKCSGDLLVQER-----------IDVQTGIKMILKLCLADGFDMFPTLLVTD-GSCMIDR 349 (557)
Q Consensus 282 ig~y~sVDAtLWfIial~~Y~k~TGD~sf~~~-----------~e~~~~ik~IL~~~~~~~f~~~p~lLv~d-G~~wmD~ 349 (557)
+ ....+|.+||+|+++++|++.|||.+|++. ..+..+++..+++.... ..+.+|..- ..+|+|.
T Consensus 416 ~-~~~~~D~~lWl~~av~~Yi~~TGD~~~L~e~~p~~~~~~~~~tl~eh~~ra~~~~~~~---~g~~GLp~~g~gDWnD~ 491 (822)
T 3rrs_A 416 I-GSGFNDDPLWLIAGTAAYIKETGDFSILDEPVPFDNEPGSEVPLFEHLTRSFEFTVTH---RGPHGLPLIGRADWNDC 491 (822)
T ss_dssp T-CSCBTTHHHHHHHHHHHHHHHHCCGGGGGSEECSTTCTTCCEEHHHHHHHHHHHHHHS---BCTTSSBBCBTCSSSTT
T ss_pred C-CCcccchHhHHHHHHHHHHHHHCCHHHHHhhhhhhccccccccHHHHHHHHHHHHHhc---CCCCCCcccCCCcchhh
Confidence 1 145699999999999999999999999851 12566888888888742 123444433 4578775
Q ss_pred c--------c-----------CCCCCceeehHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhhccccccch
Q 008699 350 R--------M-----------GIHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKL 410 (557)
Q Consensus 350 r--------~-----------pR~G~PVEIQALwYnALr~a~~L~~~~~~~~~~~~~l~~ra~~L~~~f~~~FW~d~~~l 410 (557)
. + ++.|.+||+++|||+||+.+++|++. .++.+.++++.++++.|+++|+++||- .+.
T Consensus 492 ln~~~~~~~vg~~~~~~~p~~~~~Gesv~~~al~y~AL~~~a~lA~~-~G~~~~A~~~~~~A~~lk~a~~~~~Wd-g~~- 568 (822)
T 3rrs_A 492 LNLNCFSTTPGESFQTTENQAGGVAESTFIAAQFVLYGEQYAELAAR-RGLADVADRARGHVAEMRDALLTDGWD-GSW- 568 (822)
T ss_dssp CCTTCCCCSTTCCTTTCCSSCCCCCEEHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHHTTTBC-SSS-
T ss_pred cccccccccccccccccccccCCccccHHHHHHHHHHHHHHHHHHHH-cCChHHHHHHHHHHHHHHHHHHHhccC-cce-
Confidence 2 2 26789999999999999999999998 567778899999999999999999993 221
Q ss_pred hhhhhccccccchhhhhccCCCCCCCCcccccccCCCCceeecc--ccCCccccccccccchhhhhcCCCCHH-------
Q 008699 411 NEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIGN--LQPAHMDFRFFSLGNIWSIVNGLATRD------- 481 (557)
Q Consensus 411 ~~i~r~~~e~y~~~avn~fni~pd~ipd~L~d~~~~~ggYl~gn--v~P~~~D~R~falGNlLAl~~gLl~~e------- 481 (557)
|+ +.+..+|. -+|. .+++ ++++.++.+|+++++++++
T Consensus 569 ---y~--------------------------ra~d~dg~-~~gs~~~~~~----~i~~~~q~~avlsGia~~e~~~~~~~ 614 (822)
T 3rrs_A 569 ---FL--------------------------RAYDYYGN-PIGTDAHDEG----KIWIEPQGFAVMAGVGVGEGPQDTDA 614 (822)
T ss_dssp ---BC--------------------------CEECTTSC-EESCTTSSSC----CEEHHHHHHHHHTTTTCCSSTTCTTS
T ss_pred ---eE--------------------------EEEcCCCC-CccccCCCCc----eEEeccchhHhhcCCCCcccccchHH
Confidence 11 11111111 1111 1234 4677777789999999999
Q ss_pred HHHHHHHHHHHhhhhhhccCCccccCCCCCCCCceeeeCCCCCCCCCccccCCcchhh
Q 008699 482 QSHAILDLMEAKWADLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYHNAGSWPTL 539 (557)
Q Consensus 482 qa~aVld~v~~~~~eLltp~pLRsl~P~i~d~~Wr~~t~gd~knrp~SYHNGgvWPwL 539 (557)
|++++|+.|.+ +|++|+|||+++||.. .+..--+.-..+.|.+||||++||--
T Consensus 615 ~a~~al~~v~~---~L~t~~Girll~p~f~--~~~~~~g~~~~Y~pg~~enG~iy~H~ 667 (822)
T 3rrs_A 615 PAIKALDSVNE---MLATDHGMVLQYPAYT--TYQVHMGEVSTYPPGYKENGGIFCHN 667 (822)
T ss_dssp HHHHHHHHHHH---HTEETTEEBSEESCCS--SCCTTSTTGGGSCTTBTTBTCEETTT
T ss_pred HHHHHHHHHHH---HcCCCCeEEEcCCCcc--cccCCCCcccccCCCccccccccccH
Confidence 99999999998 9999999999999633 22222223344566777777777733
No 4
>3c68_A Uncharacterized protein YGJK; GH63, processing alpha-glucosidase, alpha/alpha barrel, hydrolase; HET: BMA; 1.50A {Escherichia coli} PDB: 3c67_A* 2ds3_A* 3c69_A* 3d3i_A
Probab=99.91 E-value=3.1e-23 Score=234.16 Aligned_cols=319 Identities=15% Similarity=0.126 Sum_probs=212.1
Q ss_pred chHHHHHHHHHHHHHhhcccCCCcceEEeec--CCCCCccCCCCc--cchhhhHHHHHHHHccCCHHHHHHHHHHHHhhh
Q 008699 160 TVDCLEDEAWNLLRDSMVYYCGSPIGTIAAN--DPTSSNVLNYDQ--VFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQ 235 (557)
Q Consensus 160 ~~~~~~~~A~~lLr~~~~~~~~~p~GtiAa~--d~~~a~~~nY~~--vfgRDt~ISllglL~~G~peiar~~L~~~~~Lq 235 (557)
..++++.+|+..|+..... +.|.|... -|. ++.+||.. .|+||+.+.++|++ ..+++++|++|+.++.+|
T Consensus 279 ~~~~l~~~a~~tL~~n~~~----~~g~v~~~~v~P~-~g~~wF~~~~~w~wDs~~~a~gL~-~~~~elAr~~L~~l~~~Q 352 (761)
T 3c68_A 279 EQTRVAVKAIETLNGNWRS----PGGAVKFNTVTPS-VTGRWFSGNQTWPWDTWKQAFAMA-HFNPDIAKENIRAVFSWQ 352 (761)
T ss_dssp HHHHHHHHHHHHHHHTEEC----CBTTBCSCEECSC-TTCTTTCTTCBCHHHHHHHHHHHT-TTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhccC----ccCcCCCCeEEec-CCCCCCCcCCeeccHHHHHHHHHH-HcCHHHHHHHHHHHHHhh
Confidence 5568889999988882221 23433221 011 45689998 99999999999976 449999999999998876
Q ss_pred hhhhhcCCCCC-CCCCCCCcceeecccCCCCCCCcccccCCC-CCCCccCccCCCC-cHHHHHHHHHHHHHHhCChhhHh
Q 008699 236 SWEKTMDCHSP-GQGLMPASFKVRTVPLDGDDSATEEVLDPD-FGEAAIGRVAPVD-SGLWWIILLRAYGKCSGDLLVQE 312 (557)
Q Consensus 236 s~~~~~d~~~~-~~GliP~sfKv~h~~~r~~~~~~e~~l~ad-~Ge~aig~y~sVD-AtLWfIial~~Y~k~TGD~sf~~ 312 (557)
... .|++++ ..|.||+.+ .+.+ .|+ .|+.+ .++..+ -++||++++++|++.|||.+|+
T Consensus 353 ~~~--~d~~r~~~~G~IP~~~--~~~~------------~p~r~g~~~--~~~~~~sqPPl~~~av~~yy~~tgD~~fL- 413 (761)
T 3c68_A 353 IQP--GDSVRPQDVGFVPDLI--AWNL------------SPERGGDGG--NWNERNTKPSLAAWSVMEVYNVTQDKTWV- 413 (761)
T ss_dssp CCT--TCSSCGGGTTCCCSBB--CSSC------------CGGGTSCCS--SCBCSCCCCCCHHHHHHHHHHHHCCHHHH-
T ss_pred hhc--ccCCccCCCCEeeeee--ccCC------------cccccCccc--cccCCCCCcHHHHHHHHHHHHHhCCHHHH-
Confidence 422 255543 679999854 2211 111 12211 123222 2477899999999999999997
Q ss_pred hhhHHHHHHHHHHHHHhCCCCCCCcceec------------CC-------------------------------------
Q 008699 313 RIDVQTGIKMILKLCLADGFDMFPTLLVT------------DG------------------------------------- 343 (557)
Q Consensus 313 ~~e~~~~ik~IL~~~~~~~f~~~p~lLv~------------dG------------------------------------- 343 (557)
.++.+.|+..++|....+ +...++++. +|
T Consensus 414 -~e~~P~L~~~~~w~~~~r-d~d~~GL~~y~~~~~~~~~~prge~~~~d~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~ 491 (761)
T 3c68_A 414 -AEMYPKLVAYHDWWLRNR-DHNGNGVPEYGATRDKAHNTESGEMLFTVKKGDKEETQSGLNNYARVVEKGQYDSLEIPA 491 (761)
T ss_dssp -HHHHHHHHHHHHHHHHHS-CTTCSSCCCCEEECCTTTBCTTSCBEEEEEETTEEEEEECHHHHHHHHHHTCSSEEECHH
T ss_pred -HHHHHHHHHHHHHHHhCC-CCCcCccEEecccccccccCCCcchhccccccccchhcccccccchhccccccccchhhh
Confidence 478999999999987421 011222221 01
Q ss_pred ------Ccccccc-------------------------------cCCCCC---------ceeehHHHHHHHHHHHHhhCC
Q 008699 344 ------SCMIDRR-------------------------------MGIHGH---------PLEIQALFYSALLCAREMLAP 377 (557)
Q Consensus 344 ------~~wmD~r-------------------------------~pR~G~---------PVEIQALwYnALr~a~~L~~~ 377 (557)
-++||.. .++.|. +|++||+||.|++.+++|++.
T Consensus 492 ~~~a~weSG~D~s~rw~~~~~~~~~~y~~~~~~~~~w~~~~~~n~~~~G~l~~~~~~~~~VdlnA~ly~al~~lA~lA~~ 571 (761)
T 3c68_A 492 QVAASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQDGTLLGYSLLQESVDQASYMYSDNHYLAEMATI 571 (761)
T ss_dssp HHHHHHHHTCTTCGGGTCCCHHHHHHHHHTTCCGGGGCCCEEEEECTTCCEEEEEESEECHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhccccCCCCcchhccccccccccccccccccccchhhhhccccccccccccCcccccCHHHHHHHHHHHHHHHHHHHH
Confidence 0223320 023343 788999999999999999998
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhhccccccchhhhhhccccccchhhhhccCCCCCCCCcccccccCCCCceeeccccC
Q 008699 378 EDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIGNLQP 457 (557)
Q Consensus 378 ~~~~~~~~~~l~~ra~~L~~~f~~~FW~d~~~l~~i~r~~~e~y~~~avn~fni~pd~ipd~L~d~~~~~ggYl~gnv~P 457 (557)
.++.+.++++.++++.+++.|+++||.+..++. |.+... .+..++ + ..|.+.+
T Consensus 572 -LG~~e~A~~y~~~A~~lk~ai~~~fWd~e~G~y--~D~~~~-------------~~~~~~---------~--~~g~~~s 624 (761)
T 3c68_A 572 -LGKPEEAKRYRQLAQQLADYINTCMFDPTTQFY--YDVRIE-------------DKPLAN---------G--CAGKPIV 624 (761)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHTEETTTTEE--CCEECC-------------SSCCTT---------S--CSSCBCG
T ss_pred -hCChHHHHHHHHHHHHHHHHHHHhCcCccCCEE--EEEecC-------------CCcccc---------c--cccceee
Confidence 466677888999999999999999997544322 111000 000000 0 0011111
Q ss_pred CccccccccccchhhhhcCCCCHHHHHHHHHHHHHhhhhhhccCCccccCCCCCCCCceeeeCCCCCCCCCccccCCcch
Q 008699 458 AHMDFRFFSLGNIWSIVNGLATRDQSHAILDLMEAKWADLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYHNAGSWP 537 (557)
Q Consensus 458 ~~~D~R~falGNlLAl~~gLl~~eqa~aVld~v~~~~~eLltp~pLRsl~P~i~d~~Wr~~t~gd~knrp~SYHNGgvWP 537 (557)
+ +.+...|++++++++++++|+++|++.|.+. ..|.+|+|+|+++| . +|.++|.+||||++||
T Consensus 625 n----~~~~~s~~~pL~~Gl~~~e~a~~vl~~L~~~-~~l~t~~Girtls~--~----------~p~y~p~~yw~GpvW~ 687 (761)
T 3c68_A 625 E----RGKGPEGWSPLFNGAATQANADAVVKVMLDP-KEFNTFVPLGTAAL--T----------NPAFGADIYWRGRVWV 687 (761)
T ss_dssp G----GCCCGGGGHHHHTTCSCHHHHHHHHHHHTCT-TTTCCSSCSCSSCT--T----------CTTCCTTCTTTTCEEH
T ss_pred c----chhhHHHHHHHHcCCCCHHHHHHHHHHHhCh-hhhcCCCCccccCC--C----------CcccCCCccccCCccc
Confidence 1 2345677889999999999999999999862 16889999999999 4 3455678999999999
Q ss_pred hhhHHHHHHHHH
Q 008699 538 TLLWQVSHGSIV 549 (557)
Q Consensus 538 wLLg~y~~A~lk 549 (557)
.+.|+.+.|+.+
T Consensus 688 ~~~~lli~aL~~ 699 (761)
T 3c68_A 688 DQFWFGLKGMER 699 (761)
T ss_dssp HHHHHHHHHHHH
T ss_pred chHHHHHHHHHH
Confidence 777776777654
No 5
>2z07_A Putative uncharacterized protein TTHA0978; uncharacterized conserved protein, structural genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=99.91 E-value=1.6e-23 Score=218.51 Aligned_cols=295 Identities=14% Similarity=0.105 Sum_probs=199.9
Q ss_pred HHHHHHHHHHHHHhhcccCCCcceEEeecCCCCCccCCCCccchhhhHHHHHHHHccCCHHHHHHHHHHHHh-hhhhhhh
Q 008699 162 DCLEDEAWNLLRDSMVYYCGSPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQ-LQSWEKT 240 (557)
Q Consensus 162 ~~~~~~A~~lLr~~~~~~~~~p~GtiAa~d~~~a~~~nY~~vfgRDt~ISllglL~~G~peiar~~L~~~~~-Lqs~~~~ 240 (557)
++++++|++.|+. |.+.-+++++ .-+|...|+||+.+.++|++.. +++.+++.|..+.. .|
T Consensus 2 ~~l~~~a~~~l~~-----n~~~~~~vP~-------~~~f~~~~~wDs~~~~~gl~~~-~~~~a~~~l~~~~~~~q----- 63 (420)
T 2z07_A 2 APLRTKAVEVLQR-----NSRGAFTVPA-------HGLYPYQWLWDSAFIALGWTQV-DWERAWQELLCLFDYGQ----- 63 (420)
T ss_dssp -CHHHHHHHHHHH-----HBCSSCBCSS-------TTCCSCEEHHHHHHHHHHHTTT-CHHHHHHHHHHHHHHHC-----
T ss_pred hHHHHHHHHHHHH-----cCCCCCcCCC-------CCCCCCccHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHH-----
Confidence 3578999999998 6443344443 1389999999999999998766 77777776655554 33
Q ss_pred cCCCCCCCCCCCCcceeecccCCCCCCCcccccCCC-CCC-CccC-ccCCCCcHHHHHHHHHHHHHHhCC----hhhHhh
Q 008699 241 MDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPD-FGE-AAIG-RVAPVDSGLWWIILLRAYGKCSGD----LLVQER 313 (557)
Q Consensus 241 ~d~~~~~~GliP~sfKv~h~~~r~~~~~~e~~l~ad-~Ge-~aig-~y~sVDAtLWfIial~~Y~k~TGD----~sf~~~ 313 (557)
...|.||. .|.+...|. -.-.++ .|. .+.+ ++.+.|.++++++++++|++.||| .+|+
T Consensus 64 -----~~~G~ip~--~v~~~~~~~------y~p~~~~w~~~~~~~~~~~~~~qpP~~~~~~~~~~~~tgD~~~~~~~L-- 128 (420)
T 2z07_A 64 -----GPDGMLPH--IVFHEQSRD------YFPGPDVWGREARAQPATSGITQPPVVATVVRYLYEKDPDRDRARERA-- 128 (420)
T ss_dssp -----CTTCCCCS--EEECCSCCC------CC-----------CCCEECSSCCCCCHHHHHHHHHHHCSCHHHHHHHH--
T ss_pred -----hhCCCcce--ecccCCCcc------cCcchhhhcccccccCCCCCCcCCcHHHHHHHHHHHhCccchhHHHHH--
Confidence 37899997 333221110 000001 011 1212 346889999999999999999999 8997
Q ss_pred hhHHHHHHHHHHHHHhCCCCCCCcceec------CCC----cccccc----cC------C--------------------
Q 008699 314 IDVQTGIKMILKLCLADGFDMFPTLLVT------DGS----CMIDRR----MG------I-------------------- 353 (557)
Q Consensus 314 ~e~~~~ik~IL~~~~~~~f~~~p~lLv~------dG~----~wmD~r----~p------R-------------------- 353 (557)
.++.+.|+..++|..... +..+++++. +|. .|.|.. .| |
T Consensus 129 ~~~~p~l~~~~~~~~~~~-d~~~~Gl~~~~~~we~G~~~~~~w~~~~~~~~~~~~~~y~r~d~~~~~~~~~p~~~~~~~~ 207 (420)
T 2z07_A 129 RYLFPKLLAFHRWLYHAR-DPYRTGLVVIVHPWESGMDNSPAWDKPLSRVPVENLPPYERRDVKHVNPEERPRKEDYDRY 207 (420)
T ss_dssp HHHHHHHHHHHHHHHHHH-CTTCCSCCCBSSGGGGTCTTCGGGHHHHHTCCC-----------CCSCC-------CHHHH
T ss_pred HHHHHHHHHHHHHHhcCC-CCCCCCceeeecCCCcCCCCCccccccccccCCCCcchhhhhhhhccccccCCcHHHHHHH
Confidence 468899999999986421 112233321 242 566641 01 1
Q ss_pred -----------------------CCCceeehHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhhccccccch
Q 008699 354 -----------------------HGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKL 410 (557)
Q Consensus 354 -----------------------~G~PVEIQALwYnALr~a~~L~~~~~~~~~~~~~l~~ra~~L~~~f~~~FW~d~~~l 410 (557)
.+.||++||++|.|++.+++|++.++.+ ++++.++++.+++.|++ ||.+.+++
T Consensus 208 ~~~~~~~~esG~d~s~l~~~~~~~~~~vdlna~~~~~~~~la~la~~lg~~---a~~~~~~a~~~~~ai~~-~Wd~~~g~ 283 (420)
T 2z07_A 208 LSLLYLFRRLEYDPREIYRQSPFKVVDVGFNAILQRANRDLYALAVLLQED---PYEIEEWIVRGEVGLEA-LWDREAGF 283 (420)
T ss_dssp HHHHHHHHHTTTCHHHHHHHCSCCEECHHHHHHHHHHHHHHHHHHHHTTCC---CHHHHHHHHHHHHHHHH-TEETTTTE
T ss_pred HHHHHHHHHcCCChhhhcccCCcccCChhHHHHHHHHHHHHHHHHHHhCcc---HHHHHHHHHHHHHHHHH-hhCcccCe
Confidence 1237789999999999999999986554 55677788889999999 99653321
Q ss_pred hhhhhccccccchhhhhccCCCCCCCCcccccccCCCCceeeccccCCccccccccccchhhhhcCCCCHHHHHHHHHHH
Q 008699 411 NEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIGNLQPAHMDFRFFSLGNIWSIVNGLATRDQSHAILDLM 490 (557)
Q Consensus 411 ~~i~r~~~e~y~~~avn~fni~pd~ipd~L~d~~~~~ggYl~gnv~P~~~D~R~falGNlLAl~~gLl~~eqa~aVld~v 490 (557)
. | |+.-.. |...+ .....|.+++++++++++++++|++.+
T Consensus 284 ~--~---------------------------d~~~~~-----g~~~~------~~~~~~~~pL~~g~~~~~~a~~v~~~l 323 (420)
T 2z07_A 284 Y--F---------------------------SWDLVA-----GEPIA------VKTSAGFLPLFAGTPHQGRASLLAQEA 323 (420)
T ss_dssp E--C---------------------------CEETTT-----TEECC------CCBGGGGTHHHHTCSCHHHHHHHHHHH
T ss_pred e--E---------------------------eeeCCC-----CCeec------cccHHhHHHHHcCCCCHHHHHHHHHHH
Confidence 1 0 000000 01111 123455678889999999999999998
Q ss_pred HHhhhhhh--ccCCccccCCCCCCCCceeeeCCCCCCCCCccccCCcchhhhHHHHHHHHHh
Q 008699 491 EAKWADLV--ADMPLKICYPALEGQEWQIITGSDPKNTPWSYHNAGSWPTLLWQVSHGSIVG 550 (557)
Q Consensus 491 ~~~~~eLl--tp~pLRsl~P~i~d~~Wr~~t~gd~knrp~SYHNGgvWPwLLg~y~~A~lk~ 550 (557)
. +++ +++|+++++| . +|.++|.+||+|.+||++.++++.|+.+.
T Consensus 324 ~----~~~~~~~~gi~t~~~--~----------~~~y~~~~yw~gpvW~~~~~~~~~gL~~~ 369 (420)
T 2z07_A 324 E----RWGEKARYLLPSVDP--T----------SPFFEPGRYWRGPVWINVNWMVAEGFRDY 369 (420)
T ss_dssp H----HHTTTCSSSCBSBCT--T----------STTCCTTSTTSSCBCHHHHHHHHHHHHHT
T ss_pred H----HHhccCCCCcCcCCC--c----------CcccCCcCCCCCCcchhHHHHHHHHHHHc
Confidence 6 677 9999999999 4 44566779999999999999999997553
No 6
>2jg0_A Periplasmic trehalase; family 37, hydrolase, inhibitor, glycoside hydrolase, glycosidase, 1-thiatrehazolin; HET: TTZ; 1.50A {Escherichia coli} SCOP: a.102.1.9 PDB: 2jf4_A* 2jjb_A* 2wyn_A*
Probab=99.89 E-value=1.4e-22 Score=220.62 Aligned_cols=253 Identities=12% Similarity=0.160 Sum_probs=188.2
Q ss_pred CCCCccchhhhHHHHHHHHccCCHHHHHHHHHHHHhhhhhhhhcCCCCCCCCCCCCcceeecccCCCCCCCcccccCCCC
Q 008699 198 LNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDF 277 (557)
Q Consensus 198 ~nY~~vfgRDt~ISllglL~~G~peiar~~L~~~~~Lqs~~~~~d~~~~~~GliP~sfKv~h~~~r~~~~~~e~~l~ad~ 277 (557)
-+|..+|+||+.++++|++..|+++++|++|..++.+|. ..|.||+..
T Consensus 121 g~F~~~~~WDs~f~~~gLl~~~~~~~A~~~l~~~~~~~~----------~~G~IPng~---------------------- 168 (535)
T 2jg0_A 121 GRFREVYYWDSYFTMLGLAESGHWDKVADMVANFAHEID----------TYGHIPNGN---------------------- 168 (535)
T ss_dssp TTBCSCBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH----------HHSSCCSBS----------------------
T ss_pred ccccccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhc----------cCCcccCCC----------------------
Confidence 599999999999999999999999999999999988775 458899721
Q ss_pred CCCccCccCCCCcHHHHHHHHHHHHHHhCChhhHhhhhHHHHHHHHHHHHHhCCC--CC---------CCcc--eec---
Q 008699 278 GEAAIGRVAPVDSGLWWIILLRAYGKCSGDLLVQERIDVQTGIKMILKLCLADGF--DM---------FPTL--LVT--- 341 (557)
Q Consensus 278 Ge~aig~y~sVDAtLWfIial~~Y~k~TGD~sf~~~~e~~~~ik~IL~~~~~~~f--~~---------~p~l--Lv~--- 341 (557)
. .+|.+++.++.|++++++|+++|+| +|+ .++.+.++...+|.....- +. .+.| +..
T Consensus 169 --r--~yY~~~sqPPl~~~~v~~~~~~~~~-~fL--~~~~p~L~~~~~ww~~~~~~~~~g~~~~~~~~~~~G~~l~~y~~ 241 (535)
T 2jg0_A 169 --R--SYYLSRSQPPFFALMVELLAQHEGD-AAL--KQYLPQMQKEYAYWMDGVENLQAGQQEKRVVKLQDGTLLNRYWD 241 (535)
T ss_dssp --B--GGGTTCCCSCCHHHHHHHHHHHHTH-HHH--HHHHHHHHHHHHHHTTTCTTCCTTEEETTEEECTTSCEEECCCC
T ss_pred --C--ccCCCCCCccHHHHHHHHHHHcCCH-HHH--HHHHHHHHHHHHHHHhCCcccCccccccceeecCCCCcceeecc
Confidence 1 2577888888899999999999986 776 4688989888888654321 10 1112 211
Q ss_pred ---------------------C---CCcccccc---------cCCC----C----------CceeehHHHHHHHHHHHHh
Q 008699 342 ---------------------D---GSCMIDRR---------MGIH----G----------HPLEIQALFYSALLCAREM 374 (557)
Q Consensus 342 ---------------------d---G~~wmD~r---------~pR~----G----------~PVEIQALwYnALr~a~~L 374 (557)
+ ..+|+|.+ .+|+ | .|||+||+||+|++.+++|
T Consensus 242 ~~~~prpesyr~d~~~~~~~~~~~~~~~y~~~~~~~eSGwD~s~R~~~~~~~l~~~~t~~i~~VDlnA~ly~a~~~la~l 321 (535)
T 2jg0_A 242 DRDTPRPESWVEDIATAKSNPNRPATEIYRDLRSAAASGWDFSSRWMDNPQQLNTLRTTSIVPVDLNSLMFKMEKILARA 321 (535)
T ss_dssp SCCSCCGGGHHHHHHHHHTCTTSCHHHHHHHHHHHHHTTCCSCGGGBSSTTCGGGBCGGGEECHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCcceeehhhhhhccccchhHHHHHHHHHHHhCCCCCccccCCCCCcccccCCccchhhHHHHHHHHHHHHHHHH
Confidence 0 01343321 1332 2 6799999999999999999
Q ss_pred hCCCCCCHHHHHHHHHHHHHHHHHHHhhccccccchhhhhhccccccchhhhhccCCCCCCCCcccccccCCCCceeecc
Q 008699 375 LAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIGN 454 (557)
Q Consensus 375 ~~~~~~~~~~~~~l~~ra~~L~~~f~~~FW~d~~~l~~i~r~~~e~y~~~avn~fni~pd~ipd~L~d~~~~~ggYl~gn 454 (557)
++. .++.+.+.++.+++..+++.|+++||.+..++. |+| .-. +
T Consensus 322 A~~-lG~~~~a~~~~~~A~~lk~ai~~~fWdee~G~y--~D~---------------------------~~~-------~ 364 (535)
T 2jg0_A 322 SKA-AGDNAMANQYETLANARQKGIEKYLWNDQQGWY--ADY---------------------------DLK-------S 364 (535)
T ss_dssp HHH-HTCHHHHHHHHHHHHHHHHHHHHHSEETTTTEE--CCE---------------------------ETT-------T
T ss_pred HHH-hCChHHHHHHHHHHHHHHHHHHHhCcCCCCCEE--EEE---------------------------eCC-------C
Confidence 987 456677888999999999999999997543311 000 000 0
Q ss_pred ccCCccccccccccchhhhhcCCCCHHHHHHHHHHHHHhhhhhhccCCccccCCCCCCCCceeeeCCCCCCCCCccccCC
Q 008699 455 LQPAHMDFRFFSLGNIWSIVNGLATRDQSHAILDLMEAKWADLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYHNAG 534 (557)
Q Consensus 455 v~P~~~D~R~falGNlLAl~~gLl~~eqa~aVld~v~~~~~eLltp~pLRsl~P~i~d~~Wr~~t~gd~knrp~SYHNGg 534 (557)
-++. +.+...+.+.+++++++++|+++|++.+++ +|++|.|||++++ + +.+||+|+
T Consensus 365 ~~~~----~~~~~s~~~PL~~gi~~~e~a~~v~~~l~~---~l~t~~GlrT~s~--~---------------s~~yW~Gp 420 (535)
T 2jg0_A 365 HKVR----NQLTAAALFPLYVNAAAKDRANKMATATKT---HLLQPGGLNTTSV--K---------------SGQQWDAP 420 (535)
T ss_dssp TEEC----CCCBGGGGHHHHTTCSCHHHHHHHHHHHHH---HTEETTEECSBSC--C---------------CSSSSSTT
T ss_pred CCEe----eeehhhhHHHHhcCCCCHHHHHHHHHHHHH---HhccCCCCCCCcC--C---------------CccccCCC
Confidence 0111 134455667788999999999999999997 9999999999986 1 34899999
Q ss_pred -cchhhhHHHHHHHHHh
Q 008699 535 -SWPTLLWQVSHGSIVG 550 (557)
Q Consensus 535 -vWPwLLg~y~~A~lk~ 550 (557)
+||++.|+++.|+.|.
T Consensus 421 NvW~~~~~l~i~gL~~y 437 (535)
T 2jg0_A 421 NGWAPLQWVATEGLQNY 437 (535)
T ss_dssp EECHHHHHHHHHHHHTT
T ss_pred CcchhHHHHHHHHHHHc
Confidence 9999999999997553
No 7
>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP}
Probab=99.76 E-value=3.1e-17 Score=188.83 Aligned_cols=265 Identities=13% Similarity=0.118 Sum_probs=186.1
Q ss_pred cchHHHHHHHHHHHHHhhcccCCCcceEEeecCCCCCccCCCCccchhhhHHHHHHHH-ccCCHHHHHHHHHHHHhhhhh
Q 008699 159 ATVDCLEDEAWNLLRDSMVYYCGSPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAFL-LKGEYDIVRNFILHTLQLQSW 237 (557)
Q Consensus 159 ~~~~~~~~~A~~lLr~~~~~~~~~p~GtiAa~d~~~a~~~nY~~vfgRDt~ISllglL-~~G~peiar~~L~~~~~Lqs~ 237 (557)
.+++++++.++..|+..+..+. .| ..-.....|.||+.+++++++ ..|+++++|+.|..++..|.
T Consensus 544 ~~lN~l~~~a~~tl~~n~~~~~---------tD----~p~REr~~W~gD~~~~a~~~l~~~g~~~lar~~L~~l~~~Q~- 609 (956)
T 2okx_A 544 ALLNATWEISRHTTRLCMEDTF---------VD----CPSYEQVFWVGDSRNEALVNYYVFGETEIVERCLNLVPGSAD- 609 (956)
T ss_dssp HHHHHHHHHHHHHHHHTBSSSB---------CS----CTTTTCCCBHHHHHHHHHHHHHHTCCCHHHHHHHHHGGGGTT-
T ss_pred HHHHHHHHHHHHHHHHhcccCc---------cC----CCcccCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcc-
Confidence 3688999999999998443321 01 111134589999999999985 67999999999987765443
Q ss_pred hhhcCCCCCCCCCCCCcceeecccCCCCCCCcccccCCCCCCCccCccCCCCcHHHHHHHHHHHHHHhCChhhHhhhhHH
Q 008699 238 EKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLLVQERIDVQ 317 (557)
Q Consensus 238 ~~~~d~~~~~~GliP~sfKv~h~~~r~~~~~~e~~l~ad~Ge~aig~y~sVDAtLWfIial~~Y~k~TGD~sf~~~~e~~ 317 (557)
.+|.+|..+ | +.. .....|.++||++++++|+++|||.+|+ .++.
T Consensus 610 ---------~dG~ip~~~-----p--------------~~~-----~~~~~~~~~~~i~~~~~yy~~tGD~~~L--~e~y 654 (956)
T 2okx_A 610 ---------ETPLYLDQV-----P--------------SAW-----SSVIPNWTFFWILACREYAAHTGNEAFA--ARIW 654 (956)
T ss_dssp ---------TCTTCCSBS-----S--------------CSS-----CCCCHHHHHHHHHHHHHHHHHHTCHHHH--HHHH
T ss_pred ---------cCCCcCccc-----c--------------ccc-----cCCCcChHHHHHHHHHHHHHHhCCHHHH--HHHH
Confidence 679999844 1 110 1245789999999999999999999997 4789
Q ss_pred HHHHHHHHHHHhCCCCCCCcceec-C--C-CcccccccCCCCCceeehHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHH
Q 008699 318 TGIKMILKLCLADGFDMFPTLLVT-D--G-SCMIDRRMGIHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLV 393 (557)
Q Consensus 318 ~~ik~IL~~~~~~~f~~~p~lLv~-d--G-~~wmD~r~pR~G~PVEIQALwYnALr~a~~L~~~~~~~~~~~~~l~~ra~ 393 (557)
+.|+.+++++.... .+.+++. . + .+|.|..-++.|.++..|+++|.||+.+++|++.+ ++.+.++++.++++
T Consensus 655 p~lk~~l~~~~~~~---d~~GLl~~~~~~~~DW~d~~~~~~G~~~~~~a~~~~al~~~a~lA~~L-G~~~~a~~y~~~A~ 730 (956)
T 2okx_A 655 PAVKHTLTHYLEHI---DDSGLLNMAGWNLLDWAPIDQPNEGIVTHQNLFLVKALRDSRALAAAA-GATEEADAFAARAD 730 (956)
T ss_dssp HHHHHHHHHHHTTB---CTTSSBCCSSCCCCCSSSCCCCSSSEEHHHHHHHHHHHHHHHHHHHHT-TCGGGGHHHHHHHH
T ss_pred HHHHHHHHHHHhcC---CCCCCEEeCCCCccCccCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHH
Confidence 99999999998531 2244443 1 2 57887632678899999999999999999999984 45555677888888
Q ss_pred HHHHHHHhhccccccchhhhhhccccccchhhhhccCCCCCCCCcccccccCCCCceeeccccCCccccccccccchhhh
Q 008699 394 ALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIGNLQPAHMDFRFFSLGNIWSI 473 (557)
Q Consensus 394 ~L~~~f~~~FW~d~~~l~~i~r~~~e~y~~~avn~fni~pd~ipd~L~d~~~~~ggYl~gnv~P~~~D~R~falGNlLAl 473 (557)
.|++.|+++||.+..+++ . +.+. ++-+|.. .....+|++|+
T Consensus 731 ~lk~ai~~~~wd~~~g~y----------~-------------------d~~~-------~~g~~~~---~~~~~s~~lal 771 (956)
T 2okx_A 731 LLAETINAVLWDEEKRAY----------I-------------------DCIH-------ADGRRSD---VYSMQTQVVAY 771 (956)
T ss_dssp HHHHHHHHHSEETTTTEE----------C-------------------SEEC-------TTSCBCC---CCBHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCEE----------E-------------------eeec-------CCCCccc---ccccHHHHHHH
Confidence 899999999996433211 0 0000 0101111 12245778899
Q ss_pred hcCCCCHHHHHHHHHHHHHhhhhhhccCCccccCCCCCCCCceeeeCCCCCCCCCcccc-CCcchhhhHHHHHHHHHh
Q 008699 474 VNGLATRDQSHAILDLMEAKWADLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYHN-AGSWPTLLWQVSHGSIVG 550 (557)
Q Consensus 474 ~~gLl~~eqa~aVld~v~~~~~eLltp~pLRsl~P~i~d~~Wr~~t~gd~knrp~SYHN-GgvWPwLLg~y~~A~lk~ 550 (557)
++++++++++++| + +|+++. |..||+ |++||+ +.++.|+.+.
T Consensus 772 l~Gl~p~~~~~av-~-------~Ll~~~-------------------------~~gy~~~Gt~w~~--~~li~aLar~ 814 (956)
T 2okx_A 772 LCGVAQGEREAVI-E-------GYLSSP-------------------------PPAFVQIGSPFMS--FFYYEALEKA 814 (956)
T ss_dssp HTTCSCHHHHHHH-H-------HHHHSC-------------------------CTTSBCCCSHHHH--HHHHHHHHHT
T ss_pred HhCCCCHHHHHHH-H-------HHhcCC-------------------------CcccccCCChhHH--HHHHHHHHHC
Confidence 9999999998877 3 333210 357898 999986 4555555443
No 8
>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.73 E-value=1.3e-16 Score=179.01 Aligned_cols=230 Identities=17% Similarity=0.189 Sum_probs=165.1
Q ss_pred cchHHHHHHHHHHHHHhhcccCCCcceEEeecCCCCCccCCC-CccchhhhHHHHHHHH-ccCCHHHHHHHHHHHHhhhh
Q 008699 159 ATVDCLEDEAWNLLRDSMVYYCGSPIGTIAANDPTSSNVLNY-DQVFIRDFIPSGIAFL-LKGEYDIVRNFILHTLQLQS 236 (557)
Q Consensus 159 ~~~~~~~~~A~~lLr~~~~~~~~~p~GtiAa~d~~~a~~~nY-~~vfgRDt~ISllglL-~~G~peiar~~L~~~~~Lqs 236 (557)
.++|++++.++..++..+..+ |. | -+-+ ...|..|..|+++..+ ..++++++++.|..+ |
T Consensus 309 ~~lN~i~~~~~~t~~~n~~~~---~~------D-----cP~RER~~W~GD~~~~~~~~~~~~~~~~~~~~~l~~~---~- 370 (739)
T 3cih_A 309 EELNCIWEVGAYTMHLTTREF---FI------D-----GIKRDRWVWSGDAIQSYLMNYYLFFDSESVKRTIWLL---R- 370 (739)
T ss_dssp HHHHHHHHHHHHHHHHTBSSS---BC------S-----BSSSCCCCCHHHHHHHHHHHHTTTCCHHHHHHHHHHH---H-
T ss_pred HHHHHHHHHHHHHHHHhccCC---Cc------c-----CcccccceecCchHHHHHHHHHHhCCHHHHHHHHHHh---c-
Confidence 478899999999999833221 11 1 1222 4589999999988865 568999988877432 2
Q ss_pred hhhhcCCCCCCCCCCCCcceeecccCCCCCCCcccccCCCCCCCccCccCC-CCcHHHHHHHHHHHHHHhCChhhHhhhh
Q 008699 237 WEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAP-VDSGLWWIILLRAYGKCSGDLLVQERID 315 (557)
Q Consensus 237 ~~~~~d~~~~~~GliP~sfKv~h~~~r~~~~~~e~~l~ad~Ge~aig~y~s-VDAtLWfIial~~Y~k~TGD~sf~~~~e 315 (557)
|..|... .+++ +|.++||++++++|+++|||.+++ .+
T Consensus 371 ------------g~~p~~~----------------------------~~~~~~d~~l~wi~~~~~yy~~tGD~~~L--~e 408 (739)
T 3cih_A 371 ------------GKDPVTS----------------------------HSNTIMDYTFYWFLSVYDYYMYSGDRHFV--NQ 408 (739)
T ss_dssp ------------CCSSCCS----------------------------SGGGBHHHHHHHHHHHHHHHHHHCCHHHH--HH
T ss_pred ------------cCCCCcc----------------------------ccCCccchhHHHHHHHHHHHHHhCCHHHH--HH
Confidence 2334210 1233 799999999999999999999997 47
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcceec--CC----CcccccccCCCCCceeehHHHHHHHHHHHHhhCCCCCCHHHHHHHH
Q 008699 316 VQTGIKMILKLCLADGFDMFPTLLVT--DG----SCMIDRRMGIHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALN 389 (557)
Q Consensus 316 ~~~~ik~IL~~~~~~~f~~~p~lLv~--dG----~~wmD~r~pR~G~PVEIQALwYnALr~a~~L~~~~~~~~~~~~~l~ 389 (557)
+.+.|+.+++++... ..+++++. .| .+|+|..+++.|.++++||+||.||+.+++|++. .++.+.++++.
T Consensus 409 ~~p~l~~~ld~~~~~---~d~~GL~~~~~G~W~~~dW~d~~~~~~G~~~~~~a~~y~al~~~a~lA~~-lG~~~~A~~y~ 484 (739)
T 3cih_A 409 LYPRMQTMMDYVLGR---TNKNGMVEGMSGDWVFVDWADGYLDKKGELSFEQVLFCRSLETMALCADL-VGDKDGQQKYE 484 (739)
T ss_dssp HHHHHHHHHHHHHTT---BCTTSCBCCCTTCBCCSCCCTTCCCCSSEEHHHHHHHHHHHHHHHHHHHH-HTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh---cCCCCCcccCCCCcccCCCcccccCCCCcchHHHHHHHHHHHHHHHHHHH-cCChHHHHHHH
Confidence 999999999999863 12345543 23 5898876789999999999999999999999997 46667788899
Q ss_pred HHHHHHHHHHHhhccccccchhhhhhccccccchhhhhccCCCCCCCCcccccccCCCCceeeccccCCccccccccccc
Q 008699 390 NRLVALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIGNLQPAHMDFRFFSLGN 469 (557)
Q Consensus 390 ~ra~~L~~~f~~~FW~d~~~l~~i~r~~~e~y~~~avn~fni~pd~ipd~L~d~~~~~ggYl~gnv~P~~~D~R~falGN 469 (557)
+++++|++.|+++||.+..+. |..+.....+.| ..+..+|
T Consensus 485 ~~A~~lk~a~~~~~wd~~~G~---------------------------------------y~~~~~~G~~~d-~~~~~s~ 524 (739)
T 3cih_A 485 KLASALKAKLEPTFWNNQKQA---------------------------------------FVHNCVDGRQSD-AVTRYAN 524 (739)
T ss_dssp HHHHHHHHHHHHHHEETTTTE---------------------------------------ECSEEETTEECS-CCCHHHH
T ss_pred HHHHHHHHHHHHhccCcccCe---------------------------------------eEeecCCCCcCc-ccchHHh
Confidence 999999999999999643210 110000011111 1233367
Q ss_pred hhhhhcCCCCHHHHHHHHHHHHH
Q 008699 470 IWSIVNGLATRDQSHAILDLMEA 492 (557)
Q Consensus 470 lLAl~~gLl~~eqa~aVld~v~~ 492 (557)
++|+.+++++++++++|++.+..
T Consensus 525 ~laL~~Gl~~~e~~~~v~~~L~~ 547 (739)
T 3cih_A 525 MFSVFFDYLNADKQQAIKQSVLL 547 (739)
T ss_dssp HHHHHTTCSCHHHHHHHHHHTTT
T ss_pred HHHHHHCCCCHHHHHHHHHHHhc
Confidence 89999999999999988876543
No 9
>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A*
Probab=99.33 E-value=3.4e-11 Score=140.10 Aligned_cols=197 Identities=16% Similarity=0.126 Sum_probs=140.0
Q ss_pred chHHHHHHHHHHHHHhhcccCCCcceEEeecCCCCC-------ccCCCCccchhhhHHHHHHHHccCCHHHHHHHHHHHH
Q 008699 160 TVDCLEDEAWNLLRDSMVYYCGSPIGTIAANDPTSS-------NVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTL 232 (557)
Q Consensus 160 ~~~~~~~~A~~lLr~~~~~~~~~p~GtiAa~d~~~a-------~~~nY~~vfgRDt~ISllglL~~G~peiar~~L~~~~ 232 (557)
..++++.++...|+.+. +.-++-|.+||...+-- +-..|.-+|+||+.+++.+++..|.+++++.+|..++
T Consensus 281 ~~~~~~~rSl~~Lk~l~--~~~t~GaiiAS~t~p~~e~~gg~rn~dgYry~W~RDaa~t~~all~~G~~e~A~~~l~~L~ 358 (1020)
T 1ulv_A 281 ALRTQYDVSLMTVKSHE--DKTFPGAFIASLTIPWGQAASAETHREGYHAVWARDMYQSVTALLAAGDEEAAARGVEWLF 358 (1020)
T ss_dssp HHHHHHHHHHHHHHTTB--CSSSTTCBCSCSSCTTGGGSBCSSCCCTTCSBCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc--CCCCCCeEEEeCCCCcccccCCccCCCCCceEccchHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 56778888888888733 22223456666432210 0113888999999999999999999999999999999
Q ss_pred hhhhhhhhcCCCCCCCCCCCCcceeecccCCCCCCCcccccCCCCCCCccCccCCCCcHHHHHHHHHHHHHHhCChhhHh
Q 008699 233 QLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLLVQE 312 (557)
Q Consensus 233 ~Lqs~~~~~d~~~~~~GliP~sfKv~h~~~r~~~~~~e~~l~ad~Ge~aig~y~sVDAtLWfIial~~Y~k~TGD~sf~~ 312 (557)
..|.. ..|-++-.+.|. |+ +..+ + -..|.+.++++++.+|.+ + |.
T Consensus 359 ~~Q~~---------~~G~~~~~y~i~----------G~----~~w~-----~-~Q~D~~g~~l~~~~~~~~-~-d~---- 403 (1020)
T 1ulv_A 359 TYQQQ---------PDGHFPQTSRVD----------GT----IGQN-----G-IQLDETAFPILLANQIGR-T-DA---- 403 (1020)
T ss_dssp HHTCC---------TTSCCCSCBCTT----------SC----BCCC-----C-CBTHHHHHHHHHHHHHTC-C-CH----
T ss_pred HHhcC---------CCCCeeeEEecC----------CC----cCCC-----C-ccCccchHHHHHHHHHHh-c-CH----
Confidence 87741 345455434110 11 1111 0 278999999999999976 4 42
Q ss_pred hhhHHH-HHHHHHHHHHhCCCCCCCcceecCCCcccccccCCCCCceeehHHHHHHHHHHHHhhCCCCCCHHHHHHHHHH
Q 008699 313 RIDVQT-GIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNR 391 (557)
Q Consensus 313 ~~e~~~-~ik~IL~~~~~~~f~~~p~lLv~dG~~wmD~r~pR~G~PVEIQALwYnALr~a~~L~~~~~~~~~~~~~l~~r 391 (557)
++.+ .++.+++++...+ ..++-..|-|+ .|+-....++.|.||+++++|++. .++.+.++++.+.
T Consensus 404 --~~w~~~v~~al~~i~~~g-------~~~~~~~WEe~----~g~~~~t~~~~~~AL~~aa~lA~~-~G~~~~a~~w~~~ 469 (1020)
T 1ulv_A 404 --GFYRNELKPAADYLVAAG-------PKTPQERWEET----GGYSTSTLASQIAALAAAADIAGK-NGDAGSAAVYRAT 469 (1020)
T ss_dssp --HHHHHTHHHHHHHHHHHC-------SCBSBCTTSSC----CBEEHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHhC-------CCCChhhhccc----CCcCHHHHHHHHHHHHHHHHHHHH-cCChhHHHHHHHH
Confidence 3455 7888888887532 13443457775 466778889999999999999998 4666778888999
Q ss_pred HHHHHHHHHhhccccc
Q 008699 392 LVALSFHIREYYWIDL 407 (557)
Q Consensus 392 a~~L~~~f~~~FW~d~ 407 (557)
+..|++.|+++||.+.
T Consensus 470 Ad~i~~~i~~~~w~~~ 485 (1020)
T 1ulv_A 470 ADEWQRSTEKWMFTTN 485 (1020)
T ss_dssp HHHHHHTHHHHHEESS
T ss_pred HHHHHHHHHHhCCCCc
Confidence 9999999999999753
No 10
>1lf6_A Glucoamylase; (alpha/alpha) barrel, 6 alpha-helical hairpin torroid, super beta sandwich, carbohydrase family GH15; 2.10A {Thermoanaerobacteriumthermosaccharolyticum} SCOP: a.102.1.5 b.30.5.5 PDB: 1lf9_A*
Probab=99.14 E-value=8.3e-10 Score=123.34 Aligned_cols=192 Identities=16% Similarity=0.144 Sum_probs=131.3
Q ss_pred chHHHHHHHHHHHHHhhcccCCCcceEE-eecCCC----C--CccCCCCccchhhhHHHHHHHHccCCHHHHHHHHHHHH
Q 008699 160 TVDCLEDEAWNLLRDSMVYYCGSPIGTI-AANDPT----S--SNVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTL 232 (557)
Q Consensus 160 ~~~~~~~~A~~lLr~~~~~~~~~p~Gti-Aa~d~~----~--a~~~nY~~vfgRDt~ISllglL~~G~peiar~~L~~~~ 232 (557)
..+.++.+++..|+.+.. .+|.|.+ ||...+ . .....|.-+|+||+.+++.+++..|.+++++.++..++
T Consensus 293 ~~~~~~~rs~~~Lk~l~~---~~~~G~iiAs~t~~~~e~~~~~~~~dY~~~W~RD~~~~~~al~~~G~~~~a~~~l~~l~ 369 (684)
T 1lf6_A 293 KANSLYYNSMMILKASED---KTNKGAYIASLSIPWGDGQRDDNTGGYHLVWSRDLYHVANAFIAAGDVDSANRSLDYLA 369 (684)
T ss_dssp TCCHHHHHHHHHHHTTBC---SSSTTCBCSCSSCTTGGGSBSBSCCGGGSBCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccC---CCCCccEEeecCCCCccccCCCCCCCCEEEeccHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 446778888888877332 1346766 443111 0 11236889999999999999999999999999999998
Q ss_pred hhhhhhhhcCCCCCCCCCCCCcceeecccCCCCCCCcccccCCCCCCCccCccCCCCcHHHHHHHHHHHHHHhCChhhHh
Q 008699 233 QLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLLVQE 312 (557)
Q Consensus 233 ~Lqs~~~~~d~~~~~~GliP~sfKv~h~~~r~~~~~~e~~l~ad~Ge~aig~y~sVDAtLWfIial~~Y~k~TGD~sf~~ 312 (557)
..|. ..|-++..+ +. . |+ |..| -.-.|++-.+++++..|. .+| +
T Consensus 370 ~~q~----------~~G~~~~~~---~~--~-----G~----p~w~------~~Q~D~~g~~l~~~~~~~-~~g---~-- 413 (684)
T 1lf6_A 370 KVVK----------DNGMIPQNT---WI--S-----GK----PYWT------GIQLDEQADPIILSYRLK-RYD---L-- 413 (684)
T ss_dssp HHHH----------HHSSCCSCB---CT--T-----SC----BCCC------CCCHHHHHHHHHHHHHTT-CGG---G--
T ss_pred hhcC----------CCCCcccce---eC--C-----CC----cccC------CccccchHHHHHHHHHHH-HcC---c--
Confidence 8775 223344322 10 0 11 2222 135899999999998553 455 3
Q ss_pred hhhHHHH-HHHHHHHHHhCCCCCCCcceecCCCcccccccCCCCCceeehHHHHHHHHHHHHhhCCCCCCHHHHHHHHHH
Q 008699 313 RIDVQTG-IKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNR 391 (557)
Q Consensus 313 ~~e~~~~-ik~IL~~~~~~~f~~~p~lLv~dG~~wmD~r~pR~G~PVEIQALwYnALr~a~~L~~~~~~~~~~~~~l~~r 391 (557)
.+. ++.+++++...+ -.++-..|-++ .|.-....+..|.||+++++|++. .++.+.++++.+.
T Consensus 414 ----~~~~v~~al~~i~~~~-------~~~~~g~WE~~----~g~~~~t~~~~~~aL~~~a~lA~~-~g~~~~a~~~~~~ 477 (684)
T 1lf6_A 414 ----YDSLVKPLADFIIKIG-------PKTGQERWEEI----GGYSPATMAAEVAGLTCAAYIAEQ-NKDYESAQKYQEK 477 (684)
T ss_dssp ----TTTTHHHHHHHHHHHC-------SSBSSCTTSSC----CBBCHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred ----hHHHHHHHHHHHHHhC-------CCCCccccccc----CCcCHHHHHHHHHHHHHHHHHHHH-cCChHHHHHHHHH
Confidence 333 555566655421 23444458775 355577888999999999999997 4566778888899
Q ss_pred HHHHHHHHHhhcccc
Q 008699 392 LVALSFHIREYYWID 406 (557)
Q Consensus 392 a~~L~~~f~~~FW~d 406 (557)
+..|+..|+++||.+
T Consensus 478 a~~i~~~i~~~~w~~ 492 (684)
T 1lf6_A 478 ADNWQKLIDNLTYTE 492 (684)
T ss_dssp HHHHHHHHHHHHEES
T ss_pred HHHHHHHHHHhccCC
Confidence 999999999999965
No 11
>3qry_B Putative uncharacterized protein; alpha-alpha six fold, glycoside hydrolase, mannosidase, 1- deoxymannojirimycin, hydrolase; HET: DMJ; 1.75A {Streptococcus pneumoniae} SCOP: a.102.1.0 PDB: 3qpf_A* 3qsp_A*
Probab=98.66 E-value=1.4e-06 Score=92.82 Aligned_cols=240 Identities=16% Similarity=0.061 Sum_probs=163.1
Q ss_pred chHHHHHHHHHHHHHhhcccCCCcceEEeecCCCCCccCCCCccchhhhH--HHHHHHHccCCHHHHHHHHHHHHhhhhh
Q 008699 160 TVDCLEDEAWNLLRDSMVYYCGSPIGTIAANDPTSSNVLNYDQVFIRDFI--PSGIAFLLKGEYDIVRNFILHTLQLQSW 237 (557)
Q Consensus 160 ~~~~~~~~A~~lLr~~~~~~~~~p~GtiAa~d~~~a~~~nY~~vfgRDt~--ISllglL~~G~peiar~~L~~~~~Lqs~ 237 (557)
.+..|.+.++--=-...|.+.+.+.-+|..-|= +.-|-||+. +.-..-|+..++++ ++.++.+...|..
T Consensus 24 ~l~~lF~n~~pnTldTtv~~~~~~~tFviTGDI--------~AmWLRDS~~Ql~pY~~l~~~d~~l-~~li~G~I~rQ~~ 94 (426)
T 3qry_B 24 EWVDVFERCYTDTLDNTVEILEDGSTFVLTGDI--------PAMWLRDSTAQLRPYLHVAKRDALL-RQTIAGLVKRQMT 94 (426)
T ss_dssp HHHHHHHHHHHHHHHHSEEECTTSCEEECSSSS--------SEEEHHHHHHHHGGGHHHHTTCHHH-HHHHHHHHHHHHH
T ss_pred HHHHHHHHhccchhhheeEecCCCCEEEEeCCC--------cchhhccCHHHHHHhHHHhccCHHH-HHHHHHHHHHHHH
Confidence 456677777765555678888877778887442 267999988 33333367778887 5677777777887
Q ss_pred hhhcCCCCCCCCCCCCcceeec-ccCCCCCCCcccccCCCCCCCccCccCCCCcHHHHHHHHHHHHHHhCChhhHhhhhH
Q 008699 238 EKTMDCHSPGQGLMPASFKVRT-VPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLLVQERIDV 316 (557)
Q Consensus 238 ~~~~d~~~~~~GliP~sfKv~h-~~~r~~~~~~e~~l~ad~Ge~aig~y~sVDAtLWfIial~~Y~k~TGD~sf~~~~e~ 316 (557)
--.+|+|.-.-.--|+.- .| + ... .+.....+.+=--+||--.+|-+.+.|++.|||.++.. ++.
T Consensus 95 ~i~~dPYaNAF~~~~~~~--~~~~--------~d~---t~~~~~v~E~KyElDSL~~~l~La~~y~~~Tgd~~~f~-~~w 160 (426)
T 3qry_B 95 LVLKDPYANSFNIEENWK--GHHE--------TDH---TDLNGWIWERKYEVDSLCYPLQLAYLLWKETGETSQFD-EIF 160 (426)
T ss_dssp HHHHCTTCSEEESSSCCC--SSTT--------TEE---SCCCTTEEECCCCHHHHHHHHHHHHHHHHHHCCCTTCS-HHH
T ss_pred HhccCcccccCCCCCCCC--CccC--------CCC---CCCCCeeEeeccHHhhhHHHHHHHHHHHHhhCChhhhh-HHH
Confidence 777788842110111100 00 0 000 11112223344569999999999999999999999985 678
Q ss_pred HHHHHHHHHHHHhC-CCCCCC------------cce-------ec-CCCccccccc----CCCCCceeehHHHHHHHHHH
Q 008699 317 QTGIKMILKLCLAD-GFDMFP------------TLL-------VT-DGSCMIDRRM----GIHGHPLEIQALFYSALLCA 371 (557)
Q Consensus 317 ~~~ik~IL~~~~~~-~f~~~p------------~lL-------v~-dG~~wmD~r~----pR~G~PVEIQALwYnALr~a 371 (557)
..+++.||+-...+ ++...| ++- |. -|+.|---|- -.+||.|--|++..-||+.+
T Consensus 161 ~~a~~~il~~~~~eq~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~tGli~S~FRPSDDa~~~~~~iPsN~~~~v~L~~~ 240 (426)
T 3qry_B 161 VAATKEILHLWTVEQDHKNSPYRFVRDTDRKEDTLVNDGFGPDFAVTGMTWSAFRPSDDCCQYSYLIPSNMFAVVVLGYV 240 (426)
T ss_dssp HHHHHHHHHHHHHTTSGGGCCCCCEECCSCGGGSCHHHHTCSCCCCCSSCCCSBCTTSSBCSSSEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCceeeecCCCCCccccCCCCCCCcCCCCceecCCCCCCcccccCCCcHHHHHHHHHHHHH
Confidence 99999999998752 221111 110 11 1344443321 36889999999999999999
Q ss_pred HHhhC--CCCCCHHHHHHHHHHHHHHHHHHHhhccccccchhhhhhccccccc
Q 008699 372 REMLA--PEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYS 422 (557)
Q Consensus 372 ~~L~~--~~~~~~~~~~~l~~ra~~L~~~f~~~FW~d~~~l~~i~r~~~e~y~ 422 (557)
++|+. ...++.+.+++..+.+..+++.|.++..++....-.+|+|..++||
T Consensus 241 aei~~~~~v~~d~~la~~~~~la~eIr~~I~k~gvv~h~~~g~iyAyEVDG~G 293 (426)
T 3qry_B 241 QEIFAALNLADSQSVIADAKRLQDEIQEGIKNYAYTTNSKGEKIYAFEVDGLG 293 (426)
T ss_dssp HHHHHHHTCTTHHHHHHHHHHHHHHHHHHHHHHSEEECTTCCEEECSEECSSS
T ss_pred HHHHHhccccCcHHHHHHHHHHHHHHHHHHHHhcEecCCCcceEEEEEeccCC
Confidence 99997 3346667788888888889999999999887767788998888877
No 12
>3qt9_A Putative uncharacterized protein CPE0426; alpha-alpha six fold, glycoside hydrolase, mannosidase, HYDR; HET: YDR; 2.05A {Clostridium perfringens} SCOP: a.102.1.8 PDB: 3qt3_A* 2nvp_A
Probab=98.60 E-value=1.2e-06 Score=93.16 Aligned_cols=239 Identities=17% Similarity=0.098 Sum_probs=161.7
Q ss_pred chHHHHHHHHHHHHHhhcccCCCcceEEeecCCCCCccCCCCccchhhhHHHHH--HHHccCCHHHHHHHHHHHHhhhhh
Q 008699 160 TVDCLEDEAWNLLRDSMVYYCGSPIGTIAANDPTSSNVLNYDQVFIRDFIPSGI--AFLLKGEYDIVRNFILHTLQLQSW 237 (557)
Q Consensus 160 ~~~~~~~~A~~lLr~~~~~~~~~p~GtiAa~d~~~a~~~nY~~vfgRDt~ISll--glL~~G~peiar~~L~~~~~Lqs~ 237 (557)
.+..|.+.++--=-...|.+ +.|.-+|..-|= +.-|-||+.-=+. .-|+..+++++ +.++.+...|..
T Consensus 27 ~l~~lF~n~~pnTldTtv~~-~~~~tFviTGDI--------~AmWLRDS~~Ql~pY~~l~~~d~~l~-~li~G~I~rQ~~ 96 (427)
T 3qt9_A 27 KLQELFYNCFINTMDTTVEV-SEGDAFVITGDI--------PAMWLRDSTSQVEHYLPFVKEYPELK-AIFTGLINRQVK 96 (427)
T ss_dssp HHHHHHHHHHHHHHHHTEEE-ETTEEEECCBSS--------CSEEHHHHHHHTGGGGGGTTTCGGGH-HHHHHHHHHHHH
T ss_pred HHHHHHHHhcccchhheeEe-CCCCEEEEeCCC--------cchhhccCHHHHhhhHHHhccCHHHH-HHHHHHHHHHHH
Confidence 45667777776444556666 667777777442 2579999883333 33677788877 566677777887
Q ss_pred hhhcCCCCCCCCCCCCcceeecccCCCCCCCcccccCCCCCCCccCccCCCCcHHHHHHHHHHHHHHhCChhhHhhhhHH
Q 008699 238 EKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLLVQERIDVQ 317 (557)
Q Consensus 238 ~~~~d~~~~~~GliP~sfKv~h~~~r~~~~~~e~~l~ad~Ge~aig~y~sVDAtLWfIial~~Y~k~TGD~sf~~~~e~~ 317 (557)
--.+|+|.-.-.--|++- .|. .+ .++.....+.+=--+||--.+|-+.+.|++.|||.++.. ++..
T Consensus 97 ~i~~dPYaNAF~~~~~~~--~~~---------~d--~t~~~~~v~ErKyElDSL~~~l~La~~y~~~Tgd~~~f~-~~w~ 162 (427)
T 3qt9_A 97 CIFIDPYANAFNKEPNGQ--KWD---------ND--ITKDSPWVWERKYEIDSLCYPVRLIHKYWKESGDETFFN-YDIK 162 (427)
T ss_dssp HHHHCTTCSEECSSSCCC--CSS---------CC--BSCCCTTEEECCCCTHHHHHHHHHHHHHHHHHCCCTTCC-HHHH
T ss_pred HhccCcccccCCCCCCCc--CcC---------CC--CCCCCCceEeeccHHhhhHHHHHHHHHHHHhhCChhhhh-HHHH
Confidence 777788852111111110 010 00 011122223344579999999999999999999999985 6789
Q ss_pred HHHHHHHHHHHhC---------CCCCC-----Ccce-------ec-CCCccccccc----CCCCCceeehHHHHHHHHHH
Q 008699 318 TGIKMILKLCLAD---------GFDMF-----PTLL-------VT-DGSCMIDRRM----GIHGHPLEIQALFYSALLCA 371 (557)
Q Consensus 318 ~~ik~IL~~~~~~---------~f~~~-----p~lL-------v~-dG~~wmD~r~----pR~G~PVEIQALwYnALr~a 371 (557)
.+++.|++-...+ .|... +++- |. -|+.|---|- -.+||.|--|++..-||+.+
T Consensus 163 ~a~~~il~~~~~~q~~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~tGli~S~FRPSDDa~~~~~~iPsN~~a~vaL~~~ 242 (427)
T 3qt9_A 163 KAFNMIIDLWRVEQYHREKSDYSFQRLNCSVTDTLSHEGLGTPVTYTGMTWSGFRPSDDACEYGYLIPANMFAVVALRYI 242 (427)
T ss_dssp HHHHHHHHHHHHGGGHHHHCCCCCBCSSSCGGGSCHHHHTCSCCCCCSSCCCSBCTTSCBCSSSEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCCCceEeccCCCCCccccCCCCCCCcCCCCceecCCCCCCcccccCCCcHHHHHHHHHHHHH
Confidence 9999999988632 11100 1111 11 2344443321 36889999999999999999
Q ss_pred HHhhCCCCCCHHHHHHHHHHHHHHHHHHHhhccccccchhhhhhccccccc
Q 008699 372 REMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYS 422 (557)
Q Consensus 372 ~~L~~~~~~~~~~~~~l~~ra~~L~~~f~~~FW~d~~~l~~i~r~~~e~y~ 422 (557)
++|+....++.+.+++..+.+..+++.|.++..++....-.+|+|..++||
T Consensus 243 aei~~~l~~d~~La~~~~~la~eIr~aI~k~gvv~~p~~G~iyAyEVDG~G 293 (427)
T 3qt9_A 243 SEIAEKVYKDEELKEKADSLREEIDNAIEKHGKVYKEGFGEVYAYETDGMG 293 (427)
T ss_dssp HHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHSEEEETTTEEEECSEECSSS
T ss_pred HHHHHHhccCHHHHHHHHHHHHHHHHHHHHhcEecCCCcceEEEEEeccCC
Confidence 999987667778888888888899999999999887666678888888876
No 13
>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8
Probab=98.59 E-value=1.8e-06 Score=93.28 Aligned_cols=240 Identities=16% Similarity=0.152 Sum_probs=157.5
Q ss_pred chHHHHHHHHHHHHHhhcccCCCcceEEeecCCCCCccCCCCccchhhhHHHHHHH--HccCCHHHHHHHHHHHHhhhhh
Q 008699 160 TVDCLEDEAWNLLRDSMVYYCGSPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAF--LLKGEYDIVRNFILHTLQLQSW 237 (557)
Q Consensus 160 ~~~~~~~~A~~lLr~~~~~~~~~p~GtiAa~d~~~a~~~nY~~vfgRDt~ISllgl--L~~G~peiar~~L~~~~~Lqs~ 237 (557)
.+..|.+.++--=-..-|.+.+.|.=+|..-|= +.-|-||+.-=+.-. |+..++++ ++.++.+...|..
T Consensus 71 ~l~~lF~n~fpnTldTtv~~~~~~~tfViTGDI--------~AmWLRDS~~Q~~pYl~l~~~d~~l-~~li~G~i~rq~~ 141 (489)
T 2p0v_A 71 KLAWMFENCFPNTLDTTVHFDGKEDTFVYTGDI--------HAMWLRDSGAQVWPYVQLANKDPEL-KKMLAGVINRQFK 141 (489)
T ss_dssp HHHHHHHHHTTHHHHHTEEECSSSCEEECCBSS--------SSEEHHHHHHHSGGGGGGGGGCHHH-HHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhhhhheeeCCCCCEEEEeCCc--------cchhhcccHHHHHHHHHHhccCHHH-HHHHHHHHHHHHH
Confidence 445555555543334456668888778877442 257999987654433 46778888 6677777777888
Q ss_pred hhhcCCCCCCCCCCCCcceeecccCCCCCCCcccccCCCCCCCccCccCCCCcHHHHHHHHHHHHHHhCChhhHhhhhHH
Q 008699 238 EKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLLVQERIDVQ 317 (557)
Q Consensus 238 ~~~~d~~~~~~GliP~sfKv~h~~~r~~~~~~e~~l~ad~Ge~aig~y~sVDAtLWfIial~~Y~k~TGD~sf~~~~e~~ 317 (557)
--.+|+|.-.----|++ . .|.. ..+.+.|-. +.+=--+|+.--+|.+++.|++.|||.+++. +.+.
T Consensus 142 ~i~~dPYaNAF~~~~~~-~-~~~~-------d~t~~~P~v----~E~KyElDSla~~L~la~~Yy~~TgD~~~f~-~~w~ 207 (489)
T 2p0v_A 142 CINIDPYANAFNMNSEG-G-EWMS-------DLTDMKPEL----HERKWEIDSLCYPIRLAYHYWKTTGDASVFS-DEWL 207 (489)
T ss_dssp HHHHCTTCSEECSSSCC-C-GGGG-------SSSCCCTTE----EECCCCHHHHHHHHHHHHHHHHHHCCCTTSS-HHHH
T ss_pred HhccCccccccCCCCCC-C-CCCC-------CCCCCCccc----ccccchhhhhHHHHHHHHHHHHHhCCchhhH-HHHH
Confidence 77788885211111111 0 1111 011122221 1122279999999999999999999999984 5677
Q ss_pred HHHHHHHHHHHhC-CCCC------C--------Ccce-------ecC-CCccccccc----CCCCCceeehHHHHHHHHH
Q 008699 318 TGIKMILKLCLAD-GFDM------F--------PTLL-------VTD-GSCMIDRRM----GIHGHPLEIQALFYSALLC 370 (557)
Q Consensus 318 ~~ik~IL~~~~~~-~f~~------~--------p~lL-------v~d-G~~wmD~r~----pR~G~PVEIQALwYnALr~ 370 (557)
.+++.|++.+..+ +... | +++- |.. |+.|---|- -++|+-+--|+..|-+|+.
T Consensus 208 ~av~~il~~l~~eq~~~~~~~~Y~F~r~t~~~~dtl~~~G~G~pv~~tGLi~S~fRPSDDa~~yg~~ipSN~~a~v~L~~ 287 (489)
T 2p0v_A 208 QAIANVLKTFKEQQRKDDAKGPYRFQRKTERALDTMTNDGWGNPVKPVGLIASAFRPSDDATTFQFLVPSNFFAVTSLRK 287 (489)
T ss_dssp HHHHHHHHHHHHTTCSSCSSCSCCCCCCBSCGGGSCHHHHTCSCCCCSSCCCCSBCTTSCBCSSSEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccCCCCCceEeecCCCcccccccCCCCCccCCCCceeCCCCCCCcchhcCcchHHHHHHHHHHHH
Confidence 9999999999752 2111 0 0000 011 333332221 4689999999999999999
Q ss_pred HHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhhccccccchhhhhhccccccc
Q 008699 371 AREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYS 422 (557)
Q Consensus 371 a~~L~~~~~~~~~~~~~l~~ra~~L~~~f~~~FW~d~~~l~~i~r~~~e~y~ 422 (557)
+++|++...++.+.+++..+.+..+++.|.++-|.+..+...+|+|..++||
T Consensus 288 aaeia~~v~~d~~la~~~~~lA~eI~~gI~~~gv~~~p~~G~ifAyEVDG~G 339 (489)
T 2p0v_A 288 AAEILNTVNRKPALAKECTALADEVEKALKKYAVCNHPKYGKIYAFEVDGFG 339 (489)
T ss_dssp HHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHSEEEETTTEEEECSEECSSS
T ss_pred HHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCEecCCCCccEEEEEecCCC
Confidence 9999987666778888888888889999999999876444457787776665
No 14
>3p2c_A Putative glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE PGE; 1.60A {Bacteroides ovatus} SCOP: a.102.1.8 PDB: 3on6_A*
Probab=98.45 E-value=3.7e-06 Score=90.34 Aligned_cols=241 Identities=15% Similarity=0.123 Sum_probs=157.8
Q ss_pred chHHHHHHHHHHHHHhhcccC----CCcceEEeecCCCCCccCCCCccchhhhHHHHHHH--HccCCHHHHHHHHHHHHh
Q 008699 160 TVDCLEDEAWNLLRDSMVYYC----GSPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAF--LLKGEYDIVRNFILHTLQ 233 (557)
Q Consensus 160 ~~~~~~~~A~~lLr~~~~~~~----~~p~GtiAa~d~~~a~~~nY~~vfgRDt~ISllgl--L~~G~peiar~~L~~~~~ 233 (557)
.+..|.+.++--=-...|.+. +.|.-+|..-|= ..-|-||+.-=+.-. |+..++++ ++.++.+..
T Consensus 49 ~l~~lF~n~~pnTldTTv~~~~~~~~~~~tFviTGDI--------~AmWLRDS~~Q~~pYl~l~~~d~~l-~~li~G~I~ 119 (463)
T 3p2c_A 49 KLAWMFTNCFPNTLDTTVHFRKGSDGKPDTFVYTGDI--------HAMWLRDSGAQVWPYVQLANSDPEL-KEMLAGVIL 119 (463)
T ss_dssp HHHHHHHHHTTHHHHHTEEEEECTTSCEEEEECCBSS--------CSEEHHHHHHHTGGGGGGGGGCHHH-HHHHHHHHH
T ss_pred HHHHHHHHhccccHhhheeeeccCCCCCCEEEEeCCC--------cchhcccCHHHHHHHHHHhccCHHH-HHHHHHHHH
Confidence 344555555532233345543 346667776442 257999986554433 47778887 667777778
Q ss_pred hhhhhhhcCCCCCCCCCCCCcceeecccCCCCCCCcccccCCCCCCCccCccCCCCcHHHHHHHHHHHHHHhCChhhHhh
Q 008699 234 LQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLLVQER 313 (557)
Q Consensus 234 Lqs~~~~~d~~~~~~GliP~sfKv~h~~~r~~~~~~e~~l~ad~Ge~aig~y~sVDAtLWfIial~~Y~k~TGD~sf~~~ 313 (557)
.|..--.+|+|.-.-.--|++- -.|.. ....+.| ..+.+=--+||--.+|-+.+.|++.|||.++..
T Consensus 120 rQ~~~i~~dPYaNAF~~~~~sg-~~~~~-------d~t~~~p----~v~ErKyElDSL~~~l~La~~y~~~Tgd~~~f~- 186 (463)
T 3p2c_A 120 RQFKCINIDPYANAFNDGAIPD-GHWMS-------DLTDMKP----ELHERKWEIDSLCYPLRLAYHYWKTTGDASIFN- 186 (463)
T ss_dssp HHHHHHHHCTTCSEECSSCCTT-CTTTT-------SBSCCCT----TEEECCCCHHHHHHHHHHHHHHHHHHCCCTTCS-
T ss_pred HHHHHhccCccccccCCCCCCC-CcccC-------CCCCCCC----cEEEEecHhhhhhHHHHHHHHHHHhhCChhhhc-
Confidence 8887777788752111112111 00000 0000111 112233569999999999999999999999984
Q ss_pred hhHHHHHHHHHHHHHhC-CCC-CC------------Ccce-------ec-CCCccccccc----CCCCCceeehHHHHHH
Q 008699 314 IDVQTGIKMILKLCLAD-GFD-MF------------PTLL-------VT-DGSCMIDRRM----GIHGHPLEIQALFYSA 367 (557)
Q Consensus 314 ~e~~~~ik~IL~~~~~~-~f~-~~------------p~lL-------v~-dG~~wmD~r~----pR~G~PVEIQALwYnA 367 (557)
++...+++.|++-...+ +.+ .. +++- |. -|+.|---|- -.+||.|--|++..-+
T Consensus 187 ~~w~~a~~~il~~~~~~q~~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~tGli~S~FRPSDDa~~~~~~iPsN~~a~v~ 266 (463)
T 3p2c_A 187 EEWIQAITNVLKTFKEQQRKDGVGPYKFQRKTERALDTVSNDGLGAPVKPVGLIVSSFRPSDDATTLQFLVPSNFFAVSS 266 (463)
T ss_dssp HHHHHHHHHHHHHHHHTTCSSSSCSCCCBCCBSCGGGSCHHHHTCSCCCCSSCCBCSBCTTSCBCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCCceEeecCCCCCcccCCCCcCCCcCCCCceecCCCCCCcccccCCCcHHHHHHHHH
Confidence 68899999999998742 221 11 0110 11 1344443321 3688999999999999
Q ss_pred HHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhhccccccchhhhhhccccccc
Q 008699 368 LLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYS 422 (557)
Q Consensus 368 Lr~a~~L~~~~~~~~~~~~~l~~ra~~L~~~f~~~FW~d~~~l~~i~r~~~e~y~ 422 (557)
|+.+++|+....++.+.+++..+.+..+++.|.++.+.+....-.+|+|..++||
T Consensus 267 L~~aaei~~~l~~d~~la~~~~~lA~eIr~gI~k~gvv~~p~~G~iyAyEVDG~G 321 (463)
T 3p2c_A 267 LRKAAEILEKVNKKTALSKECKDLAQEVETALKKYAVYNHPKYGKIYAFEVDGFG 321 (463)
T ss_dssp HHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHSEEEETTTEEEECSEECSSS
T ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCEecCCCCceEEEEEEecCC
Confidence 9999999987667888888888999999999999999876666678888887776
No 15
>2fba_A Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hydrolase; 1.10A {Saccharomycopsis fibuligera} SCOP: a.102.1.1 PDB: 1ayx_A* 2f6d_A
Probab=98.10 E-value=0.00019 Score=77.73 Aligned_cols=196 Identities=16% Similarity=0.096 Sum_probs=120.7
Q ss_pred CCCcceEEeecCCCCCccCCCCccchhhhHHHHHHHHccCC--------HHHHHHHHHHHHhhhhhhhhcCCCCCCCCCC
Q 008699 180 CGSPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAFLLKGE--------YDIVRNFILHTLQLQSWEKTMDCHSPGQGLM 251 (557)
Q Consensus 180 ~~~p~GtiAa~d~~~a~~~nY~~vfgRDt~ISllglL~~G~--------peiar~~L~~~~~Lqs~~~~~d~~~~~~Gli 251 (557)
.+.|-|.|.|+.+. ..+.|.=+|.||+.+++-+++..|. .++++.++.....+|.... ..|-+
T Consensus 45 ~~~~~GaiIASptt--snpDYrY~W~RDaa~t~~aL~~~g~~~~~~~~l~~~a~~y~~~~~~lq~~~~-------~~G~~ 115 (492)
T 2fba_A 45 NNGVPGTVIASPST--SNPDYYYQWTRDSAITFLTVLSELEDNNFNTTLAKAVEYYINTSYNLQRTSN-------PSGSF 115 (492)
T ss_dssp TTSCTTCBCSCSCB--SSSBCCSEEHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTSCB-------TTBCT
T ss_pred CCCCCCeEEEeCCC--CCCCCeEEccchHHHHHHHHHHhCcccccccchHHHHHHHHHHHHHHhcccC-------CCCCc
Confidence 44567777765433 2467999999999999999886666 8999999986555554321 23433
Q ss_pred CC-cceeecccCCCCCCCcccccCCCCCCCccCccCCCCcHHHHHHHHHHHHHHhCChhhH-------------hhhhH-
Q 008699 252 PA-SFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLLVQ-------------ERIDV- 316 (557)
Q Consensus 252 P~-sfKv~h~~~r~~~~~~e~~l~ad~Ge~aig~y~sVDAtLWfIial~~Y~k~TGD~sf~-------------~~~e~- 316 (557)
+- ...++-|| +.+ -+|+ ...+..| ----|.+-+.++++.+|.+...+.... ...++
T Consensus 116 ~~~~~~glgep-~y~-vdG~-~~~~~w~------~~Q~D~~g~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (492)
T 2fba_A 116 DDENHKGLGEP-KFN-TDGS-AYTGAWG------RPQNDGPALRAYAISRYLNDVNSLNEGKLVLTDSGDINFSSTEDIY 186 (492)
T ss_dssp TSGGGGGGGCC-EEC-TTSC-BCCSCCS------CCBTTHHHHHHHHHHHHHHHHHHHSTTCCSSTTCTTCSCSSHHHHH
T ss_pred CcccccccCce-eec-cCCC-cCCcccC------CccccchhHHHHHHHHHHHHhhccccchhhhhhhccccccccHHHH
Confidence 31 11111111 000 0011 0011111 235799999999999987765433321 00234
Q ss_pred HHHHHHHHHHHHhCCCCCCCcceecCCCcccccccCCCCCceeehHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHH
Q 008699 317 QTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVALS 396 (557)
Q Consensus 317 ~~~ik~IL~~~~~~~f~~~p~lLv~dG~~wmD~r~pR~G~PVEIQALwYnALr~a~~L~~~~~~~~~~~~~l~~ra~~L~ 396 (557)
.+.|+.+++++.... + .++-..|=.+ .|+=....+--+.||..+.+|++. .++.+.++.+.+.+..++
T Consensus 187 ~~~i~~~l~~v~~~w----~---~pd~dlWEer----~g~~~~T~~~~~~AL~~aa~lA~~-~g~~~~a~~w~~~ad~i~ 254 (492)
T 2fba_A 187 KNIIKPDLEYVIGYW----D---STGFDLWEEN----QGRHFFTSLVQQKALAYAVDIAKS-FDDGDFANTLSSTASTLE 254 (492)
T ss_dssp HHTHHHHHHHHHHHT----T---SCEECTTSCC----EECCHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc----C---CCCCCCcCcc----CCCChHHHHHHHHHHHHHHHHHHH-cCCchHHHHHHHHHHHHH
Confidence 478999999987521 0 0332345444 244556788889999999999987 456667777777777888
Q ss_pred HHHHhh---ccc
Q 008699 397 FHIREY---YWI 405 (557)
Q Consensus 397 ~~f~~~---FW~ 405 (557)
..|.+. ||.
T Consensus 255 ~~I~~~~~~~w~ 266 (492)
T 2fba_A 255 SYLSGSDGGFVN 266 (492)
T ss_dssp HHHHSTTTCCEE
T ss_pred HHHHHhhhcCCC
Confidence 888877 885
No 16
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*
Probab=97.95 E-value=0.00094 Score=74.01 Aligned_cols=186 Identities=13% Similarity=0.014 Sum_probs=113.7
Q ss_pred CCcceEEeecCCCCCccCCCCccchhhhHHHHHHHH----ccCCHHHHHHHHHHHHh---hhhhhhhcCCCCCCCCCCCC
Q 008699 181 GSPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAFL----LKGEYDIVRNFILHTLQ---LQSWEKTMDCHSPGQGLMPA 253 (557)
Q Consensus 181 ~~p~GtiAa~d~~~a~~~nY~~vfgRDt~ISllglL----~~G~peiar~~L~~~~~---Lqs~~~~~d~~~~~~GliP~ 253 (557)
+.|-|.|.|+.+. ..+.|.=+|.||+.+++.+++ ..|..++++.++..+.. +|.+-. ..|-.|.
T Consensus 30 ~~~tGaiIAsptt--s~pDYrY~W~RDaa~t~~aL~~~~~~~G~~~~a~~~~~~l~~~~~lQ~~y~-------~~G~~~~ 100 (599)
T 2vn4_A 30 GTSAGAVIASPST--IDPDYYYMWTRDSALVFKNLIDRFTETYDAGLQRRIEQYITAQVTLQGLSN-------PSGSLAD 100 (599)
T ss_dssp TSCTTCBCSCSCC--SSSCCCSEEHHHHHHHHHHHHHHHHHSBCHHHHHHHHHHHHHHHHHHHCCB-------TTBCSTT
T ss_pred CCCCceEEEECCC--CCCCCeEEchhhHHHHHHHHHHHHHhCCCHHHHHHHHHHHhcccceeeeeC-------CCCCccc
Confidence 4456666654332 246899999999999999998 89999999999988864 664311 3343332
Q ss_pred cceeecccCCCCCCCcccccCCCCCCC---ccCccCCCCc-----HHHHHHHHHHHHHHhCChhhHhhhhHHHHHHHHHH
Q 008699 254 SFKVRTVPLDGDDSATEEVLDPDFGEA---AIGRVAPVDS-----GLWWIILLRAYGKCSGDLLVQERIDVQTGIKMILK 325 (557)
Q Consensus 254 sfKv~h~~~r~~~~~~e~~l~ad~Ge~---aig~y~sVDA-----tLWfIial~~Y~k~TGD~sf~~~~e~~~~ik~IL~ 325 (557)
. +.+.|| ....| |.. +.++ ---|. +-..+++++ +..+|+.++++ ..+.+.|+.+++
T Consensus 101 ~-~~l~E~----------~~~ld-G~~~~~~w~~-~Q~D~~glr~~~~~~~~~~--~~~~g~~~~~~-~~~w~~v~~~l~ 164 (599)
T 2vn4_A 101 G-SGLGEP----------KFELT-LKPFTGNWGR-PQRDGPALRAIALIGYSKW--LINNNYQSTVS-NVIWPIVRNDLN 164 (599)
T ss_dssp S-GGGGCC----------EECTT-SCBCCSCCSC-CCTHHHHHHHHHHHHHHHH--HHHTTCHHHHH-HHTHHHHHHHHH
T ss_pred c-cCcCce----------EEecC-CccccCcCCC-eeccccchhHHHHHHHHHH--HHHhCCccccc-HHHHHHHHHHHH
Confidence 1 011111 00111 111 1111 23344 445566665 45689988763 457899999999
Q ss_pred HHHhCCCCCCCcceecCCCcccccccCCCCCceeehHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhhccc
Q 008699 326 LCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWI 405 (557)
Q Consensus 326 ~~~~~~f~~~p~lLv~dG~~wmD~r~pR~G~PVEIQALwYnALr~a~~L~~~~~~~~~~~~~l~~ra~~L~~~f~~~FW~ 405 (557)
++....- .++-..|=.+ .|+=....+--+.||.++++|++.++.. ..+..+.+..++..+ ++||.
T Consensus 165 ~v~~~w~-------~~d~dlWEer----~g~~~~T~~~~~~aL~~aa~lA~~~g~~---~~~w~~~ad~i~~~i-~~~w~ 229 (599)
T 2vn4_A 165 YVAQYWN-------QTGFDLWEEV----NGSSFFTVANQHRALVEGATLAATLGQS---GSAYSSVAPQVLCFL-QRFWV 229 (599)
T ss_dssp HHHHHTT-------SCEECTTSCC----EEEEHHHHHHHHHHHHHHHHHHHHHTCC---CHHHHHHHHHHHHHH-GGGEE
T ss_pred HHHHhCC-------CCCCCeeeec----CCcchHHHHHHHHHHHHHHHHHHHcCCC---HHHHHHHHHHHHHHH-HhhcC
Confidence 9875210 1222344433 3444557788899999999999875444 334455566677777 78995
Q ss_pred c
Q 008699 406 D 406 (557)
Q Consensus 406 d 406 (557)
+
T Consensus 230 ~ 230 (599)
T 2vn4_A 230 S 230 (599)
T ss_dssp T
T ss_pred C
Confidence 3
No 17
>1gai_A Glucoamylase-471; hydrolase, glycosidase, polysaccharide degradation, glycoPro; HET: MAN NAG BMA GAC; 1.70A {Aspergillus awamori} SCOP: a.102.1.1 PDB: 1gah_A* 3gly_A* 1dog_A* 1glm_A* 1agm_A* 3eqa_A*
Probab=97.93 E-value=0.0011 Score=71.53 Aligned_cols=181 Identities=14% Similarity=0.068 Sum_probs=110.3
Q ss_pred CCcceEEeecCCCCCccCCCCccchhhhHHHHHHHH---ccCCHHHHHHHHHHHHh---hhhhhhhcCCCCCCCCCCC--
Q 008699 181 GSPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAFL---LKGEYDIVRNFILHTLQ---LQSWEKTMDCHSPGQGLMP-- 252 (557)
Q Consensus 181 ~~p~GtiAa~d~~~a~~~nY~~vfgRDt~ISllglL---~~G~peiar~~L~~~~~---Lqs~~~~~d~~~~~~GliP-- 252 (557)
+.|-|.|.|+.+. ..+.|.=+|.||+.+++-+++ ..|..++++.++..+.. +|... ...|-++
T Consensus 31 ~~~tGaiIASptt--snpDYrY~W~RDaa~t~~aL~~~~~~G~~~~a~~~~~~l~~~~~lQ~~~-------~~~G~l~~~ 101 (472)
T 1gai_A 31 GADSGIVVASPST--DNPDYFYTWTRDSGLVIKTLVDLFRNGDTDLLSTIEHYISSQAIIQGVS-------NPSGDLSSG 101 (472)
T ss_dssp TCCTTCBCSCSCB--SSSBCCSEEHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHCC-------BTTBCTTTT
T ss_pred CCCCceEEeeCCC--CCCCCeEEchhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhccc-------CCCCccccC
Confidence 3455666554322 236799999999999999998 78888877777766655 44321 1234343
Q ss_pred ----CcceeecccCCCCCCCcccccCCCCCCCccCccCCCCc-----HHHHHHHHHHHHHHhCChhhHhhhhHHHHHHHH
Q 008699 253 ----ASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDS-----GLWWIILLRAYGKCSGDLLVQERIDVQTGIKMI 323 (557)
Q Consensus 253 ----~sfKv~h~~~r~~~~~~e~~l~ad~Ge~aig~y~sVDA-----tLWfIial~~Y~k~TGD~sf~~~~e~~~~ik~I 323 (557)
-.|. ++ |+ ...++.| ----|. +-..+++.+ +..+|+..+++ ..+.+.|+.+
T Consensus 102 glgE~~y~-----vd-----G~-~~~~~w~------~~Q~D~~g~ra~~~~~~~~~--l~~~g~~~~~~-~~~w~~i~~~ 161 (472)
T 1gai_A 102 GLGEPKFN-----VD-----ET-AYTGSWG------RPQRDGPALRATAMIGFGQW--LLDNGYTSAAT-EIVWPLVRND 161 (472)
T ss_dssp GGGCCEEC-----TT-----SC-BCCSCCS------CCCTHHHHHHHHHHHHHHHH--HHHTTCHHHHH-HTHHHHHHHH
T ss_pred CCCCceEc-----cC-----CC-ccCCcCC------CccccccchhHHHHHHHHHH--HHHcCCccccc-hhHHHHHHHH
Confidence 2221 11 11 0111111 123566 333466665 55678887652 4588999999
Q ss_pred HHHHHhCCCCCCCcceecCCCcccccccCCCCCceeehHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhhc
Q 008699 324 LKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYY 403 (557)
Q Consensus 324 L~~~~~~~f~~~p~lLv~dG~~wmD~r~pR~G~PVEIQALwYnALr~a~~L~~~~~~~~~~~~~l~~ra~~L~~~f~~~F 403 (557)
++++....- .++-..|=.+ .|+=....+.-+.||..+.+|++.++.. ..+..+.+..++..+ ++|
T Consensus 162 l~~v~~~w~-------~pd~dlWEer----~g~~~~T~~~~~~AL~~aa~lA~~~g~~---~~~w~~~ad~I~~~i-~~~ 226 (472)
T 1gai_A 162 LSYVAQYWN-------QTGYDLWEEV----NGSSFFTIAVQHRALVEGSAFATAVGSS---CSWCDSQAPQILCYL-QSF 226 (472)
T ss_dssp HHHHHHHTT-------SCEECTTSCC----EEEEHHHHHHHHHHHHHHHHHHHHTTCC---CHHHHHHHHHHHHHH-GGG
T ss_pred HHHHHHhcC-------CCCCCCCccc----CCCCHHHHHHHHHHHHHHHHHHHHcCCc---HHHHHHHHHHHHHHH-Hhh
Confidence 999874210 1232344433 3555667788999999999999875444 344555666677788 788
Q ss_pred cc
Q 008699 404 WI 405 (557)
Q Consensus 404 W~ 405 (557)
|.
T Consensus 227 w~ 228 (472)
T 1gai_A 227 WT 228 (472)
T ss_dssp BC
T ss_pred cC
Confidence 83
No 18
>2rdy_A BH0842 protein; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.03A {Bacillus halodurans c-125}
Probab=86.31 E-value=1.6 Score=49.90 Aligned_cols=99 Identities=17% Similarity=0.116 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHHHHhCChhhHhhhhHHHHHHHHHHHHHhCC-CCCCCcceecCCCccccccc--C-----CCCCceeehH
Q 008699 291 GLWWIILLRAYGKCSGDLLVQERIDVQTGIKMILKLCLADG-FDMFPTLLVTDGSCMIDRRM--G-----IHGHPLEIQA 362 (557)
Q Consensus 291 tLWfIial~~Y~k~TGD~sf~~~~e~~~~ik~IL~~~~~~~-f~~~p~lLv~dG~~wmD~r~--p-----R~G~PVEIQA 362 (557)
+.|...++++|+++|||.+|++ ....+.|+.+.+++..-. ++. ..-++..+++--|... | .---+...|+
T Consensus 450 ~awla~~lw~yy~~TgD~~fL~-~~~~p~l~e~A~F~~~~l~~~~-~g~y~i~p~~sPE~~~~~~g~~~~~~~n~tytn~ 527 (803)
T 2rdy_A 450 GVWLTQHLWEHYTFGEDEAYLR-DTAYPIMKEAALFCLDWLIENE-AGYLVTSPSTSPEQRFRIGEKGYAVSSATTMDLS 527 (803)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHH-HTHHHHHHHHHHHHHHHCEECT-TSCEECSSBCBTTBCEEETTEEECCBSCCHHHHH
T ss_pred HHHHHHHHHHHHHhhCCHHHHH-hhchHHHHHHHHHHHHhhEECC-CCcEEECCCCcccccccCCCcccccccChHHHHH
Confidence 5788999999999999999984 447899999999987421 111 1112222222122210 1 0112578899
Q ss_pred HHHHHHHHHHHhhCCCCCCHHHHHHHHHH
Q 008699 363 LFYSALLCAREMLAPEDGSADLIRALNNR 391 (557)
Q Consensus 363 LwYnALr~a~~L~~~~~~~~~~~~~l~~r 391 (557)
++...|+.+.++++.++.+.++.+++.+.
T Consensus 528 ~~~~~l~~a~~a~~~Lg~~~~~~~~w~~~ 556 (803)
T 2rdy_A 528 LIAECFDNCIQAAKRLSIDEDFVKALSDA 556 (803)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCcCHHHHHHHHHH
Confidence 99999999999988766666555444333
No 19
>2eab_A Alpha-fucosidase; glycoside hydrolase; 1.12A {Bifidobacterium bifidum} PDB: 2eac_A* 2ead_A* 2eae_A*
Probab=83.89 E-value=2 Score=49.94 Aligned_cols=38 Identities=16% Similarity=0.065 Sum_probs=33.7
Q ss_pred cHHHHHHHHHHHHHHhCChhhHhhhhHHHHHHHHHHHHHh
Q 008699 290 SGLWWIILLRAYGKCSGDLLVQERIDVQTGIKMILKLCLA 329 (557)
Q Consensus 290 AtLWfIial~~Y~k~TGD~sf~~~~e~~~~ik~IL~~~~~ 329 (557)
.+-|....+++|+++|||.+|+ .+..+.|+.+.+++..
T Consensus 507 ~~aWla~~lweyy~yTgD~~fL--~~~yPlLkeaA~F~~d 544 (899)
T 2eab_A 507 AVPWILQNVYEAYEYSGDPALL--DRVYALLKEESHFYVN 544 (899)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHH--HHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhhCCHHHH--HHHHHHHHHHHHHHHh
Confidence 3578889999999999999998 4689999999999986
No 20
>1h54_A Maltose phosphorylase; hydrolase, maltose metabolism; 2.15A {Lactobacillus brevis} SCOP: a.102.1.4 b.30.5.3
Probab=78.86 E-value=8.7 Score=43.55 Aligned_cols=85 Identities=13% Similarity=0.031 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHHhCChhhHhhhhHHHHHHHHHHHHHhC-CCCCCCcceecCCCcccccccCC-CCCceeehHHHHHHH
Q 008699 291 GLWWIILLRAYGKCSGDLLVQERIDVQTGIKMILKLCLAD-GFDMFPTLLVTDGSCMIDRRMGI-HGHPLEIQALFYSAL 368 (557)
Q Consensus 291 tLWfIial~~Y~k~TGD~sf~~~~e~~~~ik~IL~~~~~~-~f~~~p~lLv~dG~~wmD~r~pR-~G~PVEIQALwYnAL 368 (557)
+.|...++++|+++|||.+|++ ....+.|+.+-++..+- .++....-++=.|.+=-|. ++- ---+...|+++...|
T Consensus 429 ~a~ia~a~~~yy~~T~D~~fL~-~~g~~~l~e~A~Fw~s~~~~~~~~g~y~i~~VtgPdE-y~e~v~nn~ytn~~a~~~l 506 (754)
T 1h54_A 429 NGDIAFAIYNYTRYTGDDSYVL-HEGAKVLTEISRFWADRVHFSKRNNQYMIHGVTGADE-YENNVDNNWDTNMLAQWTL 506 (754)
T ss_dssp HHHHHHHHHHHHHHHCCCTTTT-THHHHHHHHHHHHHHHHCEEETTTTEEECCSBCCSST-TSCSBSCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCHHHHH-hCChHHHHHHHHHHHHheEEeCCCCEEEEccccCccc-ccCCCCCcHHHHHHHHHHH
Confidence 5889999999999999999984 34578888888887641 1111100010011111111 110 012367899999999
Q ss_pred HHHHHhhCC
Q 008699 369 LCAREMLAP 377 (557)
Q Consensus 369 r~a~~L~~~ 377 (557)
+.+.++++.
T Consensus 507 ~~a~~~~~~ 515 (754)
T 1h54_A 507 KYTLEILGK 515 (754)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHHH
Confidence 999999844
No 21
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=34.15 E-value=4e+02 Score=27.83 Aligned_cols=121 Identities=16% Similarity=0.068 Sum_probs=67.4
Q ss_pred HHHHHHHHHhhcccCCCcceEEeecCCCCCccCCCCccchhhhHHHHHHHH----ccCCHHHHHHHHHHHHhhhhhhhhc
Q 008699 166 DEAWNLLRDSMVYYCGSPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAFL----LKGEYDIVRNFILHTLQLQSWEKTM 241 (557)
Q Consensus 166 ~~A~~lLr~~~~~~~~~p~GtiAa~d~~~a~~~nY~~vfgRDt~ISllglL----~~G~peiar~~L~~~~~Lqs~~~~~ 241 (557)
+.+++.-+.++.+|+ ...|+|.+-+... ...+| .+|. |++..++++. ..|+++..+-..++........
T Consensus 137 ~~~~~aA~~L~~r~~-~~~g~iqsw~~~~-~~~~~-~~iI-D~~mni~~L~~A~~~~gd~~y~~~A~~ha~~~l~~~--- 209 (397)
T 2zzr_A 137 EATIKAADKLMERYQ-EKGGFIQAWGELG-YKEHY-RLII-DCLLNIQLLFFAYEQTGDEKYRQVAVNHFYASANNV--- 209 (397)
T ss_dssp HHHHHHHHHHHTTEE-TTTTEECCSSSTT-CGGGC-EEET-THHHHTHHHHHHHHHHCCHHHHHHHHHHHHHHHHHT---
T ss_pred HHHHHHHHHHHHHhC-cCCCEEEecccCC-CCCCC-ceee-chHhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhC---
Confidence 444445555566773 3468888765321 22234 5665 8998877763 5789887776654443332211
Q ss_pred CCCCCCCCCCCCcceeecccCCCCCCCcccccCCCCCCCcc--CccCCCCcH------HHHHHHHHHHHHHhCChhhHh
Q 008699 242 DCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAI--GRVAPVDSG------LWWIILLRAYGKCSGDLLVQE 312 (557)
Q Consensus 242 d~~~~~~GliP~sfKv~h~~~r~~~~~~e~~l~ad~Ge~ai--g~y~sVDAt------LWfIial~~Y~k~TGD~sf~~ 312 (557)
++ .+|-. .|.- + ..|..|+... +.-|-.|-+ -|.|+++-..+++|+|..+++
T Consensus 210 --~r-~dgs~------~h~~-~---------~d~~~G~~~~~~t~qGy~dds~WaRGqAw~i~gl~~lY~~T~d~~yL~ 269 (397)
T 2zzr_A 210 --VR-DDSSA------FHTF-Y---------FDPETGEPLKGVTRQGYSDESSWARGQAWGIYGIPLSYRKMKDYQQII 269 (397)
T ss_dssp --BC-TTSCB------CSEE-E---------ECTTTCCEEEEECTTSSSTTSCBHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_pred --cC-CCCCe------EEEE-E---------eeCCCCCcccCCcccccCcchhhHHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 11 22311 2221 1 1233444321 123444444 899999999999999999863
No 22
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=30.61 E-value=66 Score=34.33 Aligned_cols=33 Identities=18% Similarity=0.112 Sum_probs=30.5
Q ss_pred hhcCCCCHHHHHHHHHHHHHhhhhhhccCCccccCC
Q 008699 473 IVNGLATRDQSHAILDLMEAKWADLVADMPLKICYP 508 (557)
Q Consensus 473 l~~gLl~~eqa~aVld~v~~~~~eLltp~pLRsl~P 508 (557)
++++.+++++-++++|+|.. .|.+.-|.|...+
T Consensus 22 ~~~~~~~~~~i~~~~d~~~~---~~~~~~~~~~~~~ 54 (445)
T 3k11_A 22 GTYGDLTPEQVKKDIDRVFA---YIDKETPARVVDK 54 (445)
T ss_dssp SCCSCCCHHHHHHHHHHHHH---HHHHTSCCCEEET
T ss_pred CCCCcCCHHHHHHHHHHHHH---HHhccCcceeecC
Confidence 68999999999999999998 8988889998887
No 23
>2ooa_A E3 ubiquitin-protein ligase CBL-B; alpha-helical domain; 1.56A {Homo sapiens} PDB: 2oob_A 2jnh_A 2do6_A
Probab=24.14 E-value=73 Score=24.66 Aligned_cols=27 Identities=4% Similarity=0.250 Sum_probs=23.1
Q ss_pred chhhhHHHHHHHHccCCHHHHHHHHHHH
Q 008699 204 FIRDFIPSGIAFLLKGEYDIVRNFILHT 231 (557)
Q Consensus 204 fgRDt~ISllglL~~G~peiar~~L~~~ 231 (557)
|.|+.+|-++. .+.|+.+.|.++|+.+
T Consensus 23 Fsr~~ai~AL~-~a~nnve~AaniLlef 49 (52)
T 2ooa_A 23 YAFEEVKRALE-IAQNNVEVARSILREF 49 (52)
T ss_dssp CCHHHHHHHHH-HTTTCHHHHHHHHHHH
T ss_pred CCHHHHHHHHH-HhCCCHHHHHHHHHHh
Confidence 66999999888 5688999999999765
No 24
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=22.03 E-value=2.1e+02 Score=31.11 Aligned_cols=145 Identities=17% Similarity=0.052 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHHHhhcccCCCcceEEeecCCCCCccCCCCccchhhhHHHHHHH-------H--ccCCHHHHHHHHHHHH
Q 008699 162 DCLEDEAWNLLRDSMVYYCGSPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAF-------L--LKGEYDIVRNFILHTL 232 (557)
Q Consensus 162 ~~~~~~A~~lLr~~~~~~~~~p~GtiAa~d~~~a~~~nY~~vfgRDt~ISllgl-------L--~~G~peiar~~L~~~~ 232 (557)
..++++|.++=.+++.-|+++|-|.=.+.=+-..+.......=+..+.+|..|. | .+|++.-.+.+-+.+.
T Consensus 124 ~~lL~kA~dLadrLlpAFd~TptgiP~~~vnl~~g~~~~~~~~~~~s~~Ae~gSl~LEF~~LS~LTGd~~Y~~~a~r~~~ 203 (511)
T 1dl2_A 124 TVYLNKAIDLGDRLALAFLSTQTGIPYSSINLHSGQAVKNHADGGASSTAEFTTLQMEFKYLAYLTGNRTYWELVERVYE 203 (511)
T ss_dssp HHHHHHHHHHHHHHHGGGGSSSSSCCCSEEETTTCCEECCSSGGGCEEHHHHSSCHHHHHHHHHHHTCHHHHHHHHTTHH
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCceeecccCCCCCCCCCCcccccccccceeeeHHHHHHHHCChHHHHHHHHHHH
Confidence 578899999999999999877777422210000010000011134566665542 2 6788875554444444
Q ss_pred hhhhhhhhcCCCCCCCCCCCCcceeecccCCCCCCCcccccCCCCCCCccCccCCCCcHHHHHHHHHHHHHHhCChhhHh
Q 008699 233 QLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLLVQE 312 (557)
Q Consensus 233 ~Lqs~~~~~d~~~~~~GliP~sfKv~h~~~r~~~~~~e~~l~ad~Ge~aig~y~sVDAtLWfIial~~Y~k~TGD~sf~~ 312 (557)
.+...... .....|++|+.+ - + +. | .+....++-=+.+||- +=.++.+|... +|..+.
T Consensus 204 ~l~~~~~~---~~~~~GL~p~~i--~--~-~t----g------~~~~~~~~lGa~~DS~--YEYLlK~~il~-~d~~y~- 261 (511)
T 1dl2_A 204 PLYKNNDL---LNTYDGLVPIYT--F--P-DT----G------KFGASTIRFGSRGDSF--YEYLLKQYLLT-HETLYY- 261 (511)
T ss_dssp HHHHHHTH---HHHHTTCCBSEE--C--T-TT----C------CBCSCCBCSSTTTHHH--HHHHHHHHHHH-CCHHHH-
T ss_pred HHHhcccc---cCCCCCCcceEE--c--C-CC----C------CccCCeeeecCCCCcH--HHHHHHHHHhc-CCHHHH-
Confidence 43332200 002569999855 1 1 11 1 1111112222456654 56677777665 888774
Q ss_pred hhhHHHHHHHHHHHHHh
Q 008699 313 RIDVQTGIKMILKLCLA 329 (557)
Q Consensus 313 ~~e~~~~ik~IL~~~~~ 329 (557)
..+..+++.|.+++..
T Consensus 262 -~m~~~a~~~i~~~L~~ 277 (511)
T 1dl2_A 262 -DLYRKSMEGMKKHLLA 277 (511)
T ss_dssp -HHHHHHHHHHHHHTEE
T ss_pred -HHHHHHHHHHHHHhcc
Confidence 4578888888888764
No 25
>2d9s_A CBL E3 ubiquitin protein ligase; UBA domain, dimer, protein binding, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=21.59 E-value=87 Score=24.31 Aligned_cols=28 Identities=7% Similarity=0.210 Sum_probs=23.6
Q ss_pred chhhhHHHHHHHHccCCHHHHHHHHHHHH
Q 008699 204 FIRDFIPSGIAFLLKGEYDIVRNFILHTL 232 (557)
Q Consensus 204 fgRDt~ISllglL~~G~peiar~~L~~~~ 232 (557)
|-|+.+|-++. .+.|+.|.|.++|+.+.
T Consensus 21 F~r~~ai~AL~-~a~nnve~Aa~iL~ef~ 48 (53)
T 2d9s_A 21 YSYQDIQKALV-IAHNNIEMAKNILREFS 48 (53)
T ss_dssp CCHHHHHHHHH-HTTTCHHHHHHHHHHHT
T ss_pred CCHHHHHHHHH-HhcCCHHHHHHHHHHhc
Confidence 67999999888 56889999999997654
No 26
>1w6k_A Lanosterol synthase; cyclase, cholesterol, monotopic membrane protein, B-octyl-glucoside, isomerase, steroid biosynthesis; HET: BOG LAN; 2.1A {Homo sapiens} SCOP: a.102.4.2 a.102.4.2 PDB: 1w6j_A*
Probab=20.46 E-value=9.3e+02 Score=26.95 Aligned_cols=128 Identities=12% Similarity=-0.046 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHhhcccCCCcceEEeecCCCCCccCCCCccchhhhHHHHHHHHccCCH------HHHHHHHHHHHhhhh
Q 008699 163 CLEDEAWNLLRDSMVYYCGSPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAFLLKGEY------DIVRNFILHTLQLQS 236 (557)
Q Consensus 163 ~~~~~A~~lLr~~~~~~~~~p~GtiAa~d~~~a~~~nY~~vfgRDt~ISllglL~~G~p------eiar~~L~~~~~Lqs 236 (557)
..+.++++-|++.+.. .+.|...-. .|=.++| ||..++.++...|.+ +.++..+..+...|.
T Consensus 356 ~~~~~~l~~l~~~l~~---~~dG~~~q~-------~~gs~vw--dTalal~AL~~ag~~~~~~~~~~l~ka~~~L~~~Q~ 423 (732)
T 1w6k_A 356 TAFQEHVSRIPDYLWM---GLDGMKMQG-------TNGSQIW--DTAFAIQALLEAGGHHRPEFSSCLQKAHEFLRLSQV 423 (732)
T ss_dssp HHHHHHHHTSGGGEEE---ETTEEEECS-------SSCCHHH--HHHHHHHHHHHTTGGGCGGGHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHhhee---CCCCceeCC-------CCCCchH--HHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHhcc
Confidence 4455666666554332 456754331 1114678 999999998755543 355666666665554
Q ss_pred hhhhcC---CCCCCCCCCCCcceeecccCCCCCCCcccccCCCCCCCccCccCCCCcHHHHHHHHHHHHHHhCChhhHhh
Q 008699 237 WEKTMD---CHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLLVQER 313 (557)
Q Consensus 237 ~~~~~d---~~~~~~GliP~sfKv~h~~~r~~~~~~e~~l~ad~Ge~aig~y~sVDAtLWfIial~~Y~k~TGD~sf~~~ 313 (557)
.+..-| .|+... |+.+ .|+... ..+..+|.|..-+.++..+.+..++.. .
T Consensus 424 ~~~~~d~~~~~r~~~---~GGW--------------------~f~~~~-~~~pd~d~TA~vl~aL~~~~~~~~~~g---~ 476 (732)
T 1w6k_A 424 PDNPPDYQKYYRQMR---KGGF--------------------SFSTLD-CGWIVSDCTAEALKAVLLLQEKCPHVT---E 476 (732)
T ss_dssp CCCCTTGGGGTCCCC---TTCC--------------------BSSCTT-TCCBCHHHHHHHHHHHHHHHHHCTTCC---S
T ss_pred cccCCcccccccCCC---CCee--------------------cCCCCC-CCCCccccHHHHHHHHHHHhccccccc---c
Confidence 210000 011111 1211 011111 125689999999999998877654211 0
Q ss_pred hhHHHHHHHHHHHHHh
Q 008699 314 IDVQTGIKMILKLCLA 329 (557)
Q Consensus 314 ~e~~~~ik~IL~~~~~ 329 (557)
+.....++.+++|++.
T Consensus 477 ~~~~~~i~~av~wLls 492 (732)
T 1w6k_A 477 HIPRERLCDAVAVLLN 492 (732)
T ss_dssp CCCHHHHHHHHHHHHT
T ss_pred hhhHHHHHHHHHHHHH
Confidence 1124456677777763
Done!