Query 008702
Match_columns 557
No_of_seqs 156 out of 1530
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 09:44:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008702.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008702hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3p9d_G T-complex protein 1 sub 100.0 4E-119 1E-123 977.2 43.0 545 4-556 5-550 (550)
2 1q3q_A Thermosome alpha subuni 100.0 8E-116 3E-120 952.0 57.1 524 1-534 1-530 (548)
3 3ruv_A Chaperonin, CPN; double 100.0 3E-115 1E-119 946.4 57.1 515 10-534 6-524 (543)
4 3iyg_H T-complex protein 1 sub 100.0 1E-114 4E-119 936.6 60.7 514 13-529 1-514 (515)
5 1a6d_A Thermosome (alpha subun 100.0 3E-115 1E-119 947.1 52.0 513 8-532 7-525 (545)
6 3ko1_A Chaperonin; 9-fold symm 100.0 5E-115 2E-119 944.4 53.1 522 4-534 11-538 (553)
7 1a6d_B Thermosome (beta subuni 100.0 3E-114 1E-118 939.6 54.8 518 7-534 5-528 (543)
8 3iyg_A T-complex protein 1 sub 100.0 2E-112 8E-117 922.0 59.7 506 16-530 3-529 (529)
9 3iyg_B T-complex protein 1 sub 100.0 3E-112 1E-116 917.8 59.2 509 15-531 2-513 (513)
10 3iyg_G T-complex protein 1 sub 100.0 4E-112 1E-116 917.3 58.9 506 15-529 1-514 (515)
11 3p9d_A T-complex protein 1 sub 100.0 2E-113 8E-118 933.8 48.7 524 1-534 1-553 (559)
12 3p9d_D T-complex protein 1 sub 100.0 9E-113 3E-117 924.0 42.6 511 10-529 6-528 (528)
13 3p9d_E T-complex protein 1 sub 100.0 8E-112 3E-116 922.1 49.8 518 9-531 29-560 (562)
14 3iyg_D T-complex protein 1 sub 100.0 1E-110 4E-115 906.2 56.4 503 16-529 4-518 (518)
15 3iyg_Z T-complex protein 1 sub 100.0 8E-111 3E-115 906.6 54.8 501 17-529 4-517 (517)
16 3iyg_E T-complex protein 1 sub 100.0 3E-110 9E-115 904.0 58.6 506 16-528 3-514 (515)
17 3p9d_C T-complex protein 1 sub 100.0 6E-112 2E-116 922.5 45.6 516 6-531 2-588 (590)
18 3p9d_B T-complex protein 1 sub 100.0 2E-111 7E-116 915.2 39.0 517 10-534 4-523 (527)
19 3p9d_H T-complex protein 1 sub 100.0 2E-111 8E-116 919.6 37.5 520 7-535 9-554 (568)
20 3iyg_Q T-complex protein 1 sub 100.0 2E-108 5E-113 889.8 57.9 502 14-528 1-511 (512)
21 3p9d_F T-complex protein 1 sub 100.0 2E-110 7E-115 910.0 37.2 517 10-532 4-540 (546)
22 3aq1_B Thermosome subunit; gro 100.0 1E-104 4E-109 856.2 42.5 475 51-535 1-482 (500)
23 1we3_A CPN60(groel); chaperoni 100.0 1.5E-97 5E-102 805.0 47.2 467 17-534 4-530 (543)
24 1iok_A Chaperonin 60; chaperon 100.0 3.7E-98 1E-102 809.1 36.3 466 17-534 5-530 (545)
25 1kp8_A Groel protein; chaperon 100.0 5.3E-97 2E-101 799.4 44.3 464 17-533 4-527 (547)
26 3rtk_A 60 kDa chaperonin 2; he 100.0 5.1E-97 2E-101 797.2 33.6 475 17-546 4-537 (546)
27 1gml_A T-complex protein 1 sub 100.0 3.4E-37 1.2E-41 286.6 18.0 173 208-383 1-174 (178)
28 1ass_A Thermosome; chaperonin, 100.0 2.6E-32 9E-37 248.6 14.1 154 214-370 1-154 (159)
29 3m6c_A 60 kDa chaperonin 1; ch 99.5 2.4E-13 8.2E-18 123.6 11.7 147 211-397 2-169 (194)
30 1srv_A Protein (groel (HSP60 c 99.5 1.9E-13 6.4E-18 118.6 10.2 124 216-366 1-144 (145)
31 3osx_A 60 kDa chaperonin; alph 99.4 1.1E-12 3.8E-17 119.5 12.8 143 215-397 13-176 (201)
32 1o13_A Probable NIFB protein; 45.7 38 0.0013 28.7 6.0 52 280-332 68-119 (136)
33 2yx6_A Hypothetical protein PH 44.1 41 0.0014 27.6 5.9 53 279-332 54-106 (121)
34 1eo1_A Hypothetical protein MT 41.4 55 0.0019 26.9 6.4 52 280-332 57-108 (124)
35 2wfb_A Putative uncharacterize 40.0 50 0.0017 27.0 5.8 51 280-331 59-110 (120)
36 2re2_A Uncharacterized protein 27.7 91 0.0031 26.2 5.5 51 279-331 70-120 (136)
37 1rdu_A Conserved hypothetical 25.8 54 0.0019 26.6 3.6 52 280-332 54-105 (116)
No 1
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=4e-119 Score=977.16 Aligned_cols=545 Identities=59% Similarity=0.952 Sum_probs=496.4
Q ss_pred ccchhHhhcccccccccchHHHHHHHHHHHHHHHHhhhccCCCCCceeeeCCCCCeEEecCHHHHhhhccccChHHHHHH
Q 008702 4 MMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILV 83 (557)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~a~ll~ 83 (557)
||++|..+|+++++..+|.+++.+||.||.+|+++|++||||+||+|||+++.|+++|||||+|||++|+++||+|+|++
T Consensus 5 ~~~~~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~Akll~ 84 (550)
T 3p9d_G 5 SQTPTIVVLKEGTDASQGKGQIISNINACVAVQEALKPTLGPLGSDILIVTSNQKTTISNDGATILKLLDVVHPAAKTLV 84 (550)
T ss_dssp -----------CCCEEESHHHHHHHHHHHHHHHTTTGGGSTTTCCCEEEECSSSCEEEECCHHHHTTTSCCCSHHHHHHH
T ss_pred cCCcchhhhcCCcchhhhHHHHHHHHHHHHHHHHHHHhccCCCCCcEEEECCCCCeEEECCHHHHHHHccCCCHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcccccCCchhHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHHHHH
Q 008702 84 DIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAA 163 (557)
Q Consensus 84 ~~a~~~~~~~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~~~~~l~~ia~ 163 (557)
++|++||+++||||||++|||++||+++.+++++|+||+.|++||++|++.+++.|++++++++..++ .+++.|.++|+
T Consensus 85 e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~-~~~~~L~~vA~ 163 (550)
T 3p9d_G 85 DISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINELAVDITSEKS-SGRELLERCAR 163 (550)
T ss_dssp HHHHHHHTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHHHHHSEECCCCC-------CHHHHHH
T ss_pred HHHHHhhhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCcc-hhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999875331 12678999999
Q ss_pred HhhccCccCchhHHHHHHHHHHHHhhCCCC-CCCCceeeeecCCCcccceEEEeEEEeccccCCCCCCCCccccCceEEE
Q 008702 164 TTLSSKLIGGEKEFFASMVVDAVGAIGDGD-RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILL 242 (557)
Q Consensus 164 tsl~sk~~~~~~~~ls~lv~~Ai~~v~~~~-d~~~I~i~~i~gg~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~kIll 242 (557)
|+++||+++.++++|++|++||+.++++++ |.++|+|++++|++++||++++|++|+++|.||||.+||++++||||++
T Consensus 164 tsl~sK~~~~~~~~i~~livdAv~~V~~~~~dl~~I~Vikv~Gg~~~ds~lv~G~~~dk~~~s~yf~~~~~~~en~kIll 243 (550)
T 3p9d_G 164 TAMSSKLIHNNADFFVKMCVDAVLSLDRNDLDDKLIGIKKIPGGAMEESLFINGVAFKKTFSYAGFEQQPKKFNNPKILS 243 (550)
T ss_dssp HHHHHTTTGGGHHHHHHHHHHHHHHCCSSSCCGGGCCCCBCCSSCGGGCCCCSSEEECCCSSCTTCSCSCSCCSSCCEEE
T ss_pred HhccCccccccHhHHHHHHHHHHHHhCccccCchheeEEEecCCCccceeEEeeEEEeccccccccccCcccccCceEEE
Confidence 999999999999999999999999998655 8899999999999999999999999999999999999999999999999
Q ss_pred eeccccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhCCcccccCCChHHH
Q 008702 243 LNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDL 322 (557)
Q Consensus 243 ~~~~Le~~~~~~~~~~~i~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~lii~~~~i~~~al~~l~~~~I~~v~~v~~~~l 322 (557)
+|++|++++++.++++.+++++++.++.+.|++++++++++|++.|++||+++++|++.+++||+++||++++++++++|
T Consensus 244 ~~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vVi~~~~I~dla~~~L~~~gI~~v~~v~k~~l 323 (550)
T 3p9d_G 244 LNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFADRNIFCAGRVSADDM 323 (550)
T ss_dssp ECSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEEEESSCCCHHHHHTTGGGTCEEEECCCTTHH
T ss_pred eccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccHHHHHHHHHcCCccccCcCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCeecccccCCCCCCccccceEEEEEECCeeEEEEEcCCCCceEEEEeecCCHHHHHHHHHHHHHHHHHHHHH
Q 008702 323 LRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRA 402 (557)
Q Consensus 323 e~Ia~~tGa~ii~s~~~l~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~~~~TIll~G~t~~~l~e~k~~i~dal~~~~~~ 402 (557)
+|||++|||++++++++++++++|+|+.|++.++++++|++|+||+++++|||+|||+|+.+++|.||+++|||+++|++
T Consensus 324 erIa~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~e~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~a 403 (550)
T 3p9d_G 324 NRVIQAVGGSIQSTTSDIKPEHLGTCALFEEMQIGSERYNLFQGCPQAKTCTLLLRGGAEQVIAEVERSLHDAIMIVKRA 403 (550)
T ss_dssp HHHHHHTCCCCBSSGGGCCGGGCCCCSBCCCCCCSSSCCEEEBCCTTCCCCCCCBCSSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCceecchhhCCHHHcCCceEEEEEEeCCeEEEEEecCCCCceeEEEEeCCcHHHHHHHHHHHHhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCceecCCchhHHHHHHHHHHHHhhhcchHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHccCCCCCCCCeE
Q 008702 403 TKNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYG 482 (557)
Q Consensus 403 ~~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~~~~~~~G 482 (557)
+++|++|||||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|.. |+ .++|
T Consensus 404 v~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~--~~-~~~G 480 (550)
T 3p9d_G 404 LQNKLIVAGGGATEMEVSKCLRDYSKTIAGKQQMIINAFAKALEVIPRQLCENAGFDAIEILNKLRLAHSK--GE-KWYG 480 (550)
T ss_dssp HHSCCEEETTTHHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHHTHHHHHHHHTSCSCHHHHHHHHHHHHHH--SC-SCCC
T ss_pred HhcCCcccCCCHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhc--CC-Ccee
Confidence 99999999999999999999999998899999999999999999999999999999999999999998865 55 7899
Q ss_pred EecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcCCCCCcccccccccCCCCCCCCCCCCCCC
Q 008702 483 VDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPKSESAQGEAAASAMGGRGRGRGRGMRR 556 (557)
Q Consensus 483 id~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id~iI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (557)
||+.+|++.||++.|||||+.||+++|++|+|+|++||+||++|...|.+++++++ ++++| +| +|+||.|
T Consensus 481 ~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~~~~~~~~~~-~~~~~-~~--~~~~~~~ 550 (550)
T 3p9d_G 481 VVFETENIGDNFAKFVWEPALVKINALNSATEATNLILSVDETITNKGSESANAGM-MPPQG-AG--RGRGMPM 550 (550)
T ss_dssp BCSSSSSBCCHHHHTCEEEHHHHHHHHHHHHHHHHHHHTEEEEECCCCCC------------------------
T ss_pred eeCCCCcccchHhccCEecHHHHHHHHHHHHHHHHHHHhHHHHhhCCCcccccCCC-CCCCC-CC--CCCCCCC
Confidence 99999999999999999999999999999999999999999999998887665432 23444 33 3455543
No 2
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=8e-116 Score=951.96 Aligned_cols=524 Identities=35% Similarity=0.577 Sum_probs=497.6
Q ss_pred CccccchhHhhcccccccccchHHHHHHHHHHHHHHHHhhhccCCCCCceeeeCCCCCeEEecCHHHHhhhccccChHHH
Q 008702 1 MAAMMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAK 80 (557)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~a~ 80 (557)
|+.++..|..+|+++++..+|.+++.+|+.||.+|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|+
T Consensus 1 m~~~~~~~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Ak 80 (548)
T 1q3q_A 1 MAQLSGQPVVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQHPAAK 80 (548)
T ss_dssp --------CCCSCTTCEEEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTCCEEEESCHHHHHHHSCCCSHHHH
T ss_pred CCCcCCCCcccccCCcceechHHHHHHHHHHHHHHHHHHHhccCCCCceEEEEcCCCCeEEECCHHHHHHHhhccchHHH
Confidence 56544556778999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccccCCchhHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHH
Q 008702 81 ILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSK 160 (557)
Q Consensus 81 ll~~~a~~~~~~~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~~~~~l~~ 160 (557)
|++++|++|++++||||||++||+++||+++.+++++|+||+.|++||++|++.++++|++++++++..+ ++.|.+
T Consensus 81 ll~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d----~~~l~~ 156 (548)
T 1q3q_A 81 MMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDPDD----EETLLK 156 (548)
T ss_dssp HHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTC----HHHHHH
T ss_pred HHHHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC----HHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999987654 789999
Q ss_pred HHHHhhccCccCchhHHHHHHHHHHHHhhCCC-----C-CCCCceeeeecCCCcccceEEEeEEEeccccCCCCCCCCcc
Q 008702 161 CAATTLSSKLIGGEKEFFASMVVDAVGAIGDG-----D-RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKK 234 (557)
Q Consensus 161 ia~tsl~sk~~~~~~~~ls~lv~~Ai~~v~~~-----~-d~~~I~i~~i~gg~~~ds~li~Givl~~~~~~~~~~~~~~~ 234 (557)
+|+|+|+||+.++|+++|++|+++|+.+++++ + |.++|+|++++|++++||++++|++|+++|.||+| |++
T Consensus 157 va~tsl~sKi~~~~~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m---~~~ 233 (548)
T 1q3q_A 157 IAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRM---PKR 233 (548)
T ss_dssp HHHHHSCSSTTGGGHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGGGCEEESSEEESCCCSSTTS---CSE
T ss_pred HHHHHhhccccccchHHHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCCccceEEEeeEEEeccCCCCCC---cce
Confidence 99999999999999999999999999999853 1 56799999999999999999999999999999987 799
Q ss_pred ccCceEEEeeccccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhCCcccc
Q 008702 235 FLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCA 314 (557)
Q Consensus 235 ~~n~kIll~~~~Le~~~~~~~~~~~i~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~lii~~~~i~~~al~~l~~~~I~~v 314 (557)
++||||++++++|++++++.++++.++++++++++.++|+++++++++++++.|++|||++++|++.+++||.++||+++
T Consensus 234 ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av 313 (548)
T 1q3q_A 234 VENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAV 313 (548)
T ss_dssp ESSEEEEEECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHTTCEEE
T ss_pred ecCCEEEEEecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEcCCcCHHHHHHHHHCCcEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCChHHHHHHHHHhCCeecccccCCCCCCccccceEEEEEECCeeEEEEEcCCCCceEEEEeecCCHHHHHHHHHHHHH
Q 008702 315 GRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHD 394 (557)
Q Consensus 315 ~~v~~~~le~Ia~~tGa~ii~s~~~l~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~~~~TIll~G~t~~~l~e~k~~i~d 394 (557)
+++++++|+|||++|||++++++++++++++|+|+.|++.++++++|++|+||++++.|||+|||+|+.+++|.||+++|
T Consensus 314 ~~~~k~~le~ia~~tGa~ii~~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~te~~l~E~er~l~D 393 (548)
T 1q3q_A 314 RRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALED 393 (548)
T ss_dssp CSCCHHHHHHHHHHHCCCCBSSGGGCCGGGCEEESEEEEEEETTEEEEEEECCSSCSSEEEEEEESSHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHhCCeEecccccCCHHHCCCceEEEEEEecCceEEEEecCCCCCeEEEEECCCChHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCceecCCchhHHHHHHHHHHHHhhhcchHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHccCC
Q 008702 395 AIMIVRRATKNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALP 474 (557)
Q Consensus 395 al~~~~~~~~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~ 474 (557)
||+++|+++++|++|||||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|.+
T Consensus 394 Al~~~r~a~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~- 472 (548)
T 1q3q_A 394 AVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKN- 472 (548)
T ss_dssp HHHHHHHHHHSCEEEECTTHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHCCCcccCCcHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhc-
Confidence 9999999999999999999999999999999998889999999999999999999999999999999999999998865
Q ss_pred CCCCCCeEEecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcCCCCCcc
Q 008702 475 TGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPKSESA 534 (557)
Q Consensus 475 ~~~~~~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id~iI~~~~~~~~ 534 (557)
++ .++|||..+|++.||.+.|||||+.||+++|++|+|+|++||+||++|...|.+++
T Consensus 473 -~~-~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~ 530 (548)
T 1q3q_A 473 -RG-LGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAKATKPE 530 (548)
T ss_dssp -HC-TTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTCCEEEECCC----
T ss_pred -CC-CCcceeCCCCCccchhhcCCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCC
Confidence 44 68999999999999999999999999999999999999999999999999876644
No 3
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=3.1e-115 Score=946.40 Aligned_cols=515 Identities=36% Similarity=0.589 Sum_probs=496.7
Q ss_pred hhcccccccccchHHHHHHHHHHHHHHHHhhhccCCCCCceeeeCCCCCeEEecCHHHHhhhccccChHHHHHHHHHHhc
Q 008702 10 ILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQ 89 (557)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~a~ll~~~a~~~ 89 (557)
.+|++++++.+|.+++.+|+.||.+|+++|++||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|
T Consensus 6 ~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~q 85 (543)
T 3ruv_A 6 GVLPENMKRYMGRDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEHPAAKMLIEVAKTQ 85 (543)
T ss_dssp CSSCSSEEEEETHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTSCEEEECCHHHHHHHSCCCCHHHHHHHHHHHHH
T ss_pred eeecCCcchhccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHHHHHHhhccC
Q 008702 90 DSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSK 169 (557)
Q Consensus 90 ~~~~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~~~~~l~~ia~tsl~sk 169 (557)
++++||||||+||||++||+++.+++++|+||+.|++||+.|++.++++|++++++++..+ ++.|.++|+|+++||
T Consensus 86 d~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d----~~~L~~va~tsl~sK 161 (543)
T 3ruv_A 86 EKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQD----KEILTKIAMTSITGK 161 (543)
T ss_dssp HHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTC----HHHHHHHHHHHHHHT
T ss_pred HhhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCCCC----HHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999999999999999999999999999987644 789999999999999
Q ss_pred ccCchhHHHHHHHHHHHHhhCCC-C--CCCCceeeeecCCCcccceEEEeEEEeccccCCCCCCCCccccCceEEEeecc
Q 008702 170 LIGGEKEFFASMVVDAVGAIGDG-D--RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIE 246 (557)
Q Consensus 170 ~~~~~~~~ls~lv~~Ai~~v~~~-~--d~~~I~i~~i~gg~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~kIll~~~~ 246 (557)
+.+.++++|++|+++|+.+++++ . |.++|+|+++.|+++.||++++|++|+++|.||+| |++++||||+++|++
T Consensus 162 ~~~~~~~~i~~livdAv~~V~~~~g~~dl~~I~V~k~~Gg~~~ds~lv~G~v~dk~~~~~~m---~~~~~n~kIll~~~~ 238 (543)
T 3ruv_A 162 GAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASIDDTELIKGVLVDKERVSAQM---PKKVTDAKIALLNCA 238 (543)
T ss_dssp CGGGCCHHHHHHHHHHHHHHCCTTSCCCGGGEEEEEEECSCGGGCEEESSEEESCCCSCTTS---CSEEEEEEEEEESSC
T ss_pred ccchhHHHHHHHHHHHHHHhhccCCCcccceEEEEEcCCCCcccceeecceEEeccccCccc---cccccCcEEEEEccc
Confidence 99999999999999999999875 2 67789999999999999999999999999999986 899999999999999
Q ss_pred ccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhCCcccccCCChHHHHHHH
Q 008702 247 LELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVA 326 (557)
Q Consensus 247 Le~~~~~~~~~~~i~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~lii~~~~i~~~al~~l~~~~I~~v~~v~~~~le~Ia 326 (557)
|++++++.++++.+++++++.++.+.|++++++++++|++.|+||||++++|++.+++||.++||++++++++++|+|||
T Consensus 239 Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~gI~~v~~v~k~~le~ia 318 (543)
T 3ruv_A 239 IEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSDMEKLA 318 (543)
T ss_dssp BSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHH
T ss_pred ccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHcCcEEEeeCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCeecccccCCCCCCccccceEEEEEECCeeEEEEEcCCCCceEEEEeecCCHHHHHHHHHHHHHHHHHHHHHhhCC
Q 008702 327 AATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNS 406 (557)
Q Consensus 327 ~~tGa~ii~s~~~l~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~~~~TIll~G~t~~~l~e~k~~i~dal~~~~~~~~~g 406 (557)
++|||++++++++++++++|+|+.|++.++++++|++|+||++++.|||+|||+|+.+++|.||+++|||+++|+++++|
T Consensus 319 ~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g 398 (543)
T 3ruv_A 319 KATGANVIAAIAALSAQDLGDAGLVEERKISGDSMIFVEECKHPKAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDG 398 (543)
T ss_dssp HHHCCCEESCGGGCCGGGCEEEEEEEEEEETTEEEEEEECCSSCSSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHhCCceecccccCCHHHCCcccEEEEEEeCCceEEEEECCCCCceeEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceecCCchhHHHHHHHHHHHHhhhcchHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHcc-CCCCCCCCeEEec
Q 008702 407 TVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHA-LPTGEGAPYGVDI 485 (557)
Q Consensus 407 ~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~-~~~~~~~~~Gid~ 485 (557)
++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|. . |+ .++|||+
T Consensus 399 ~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~--~~-~~~G~d~ 475 (543)
T 3ruv_A 399 RIVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASN--GN-KCAGLNV 475 (543)
T ss_dssp EEEETTTHHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHHHHHHTTT--CC-TTEEECT
T ss_pred CeecCCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhc--CC-ceeeeeC
Confidence 999999999999999999999889999999999999999999999999999999999999999986 4 55 7899999
Q ss_pred CCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcCCCCCcc
Q 008702 486 NTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPKSESA 534 (557)
Q Consensus 486 ~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id~iI~~~~~~~~ 534 (557)
.+|++.||++.|||||+.||+++|++|+|+|++|||||++|...|...+
T Consensus 476 ~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~~~~~~ 524 (543)
T 3ruv_A 476 FTGAVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRIDDVIAAEKLRGA 524 (543)
T ss_dssp TTCSEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTCCEEEEEC-----
T ss_pred CCCccccHHHcCCEecHHHHHHHHHHHHHHHHHHHhHHhheecCccCCC
Confidence 9999999999999999999999999999999999999999998877654
No 4
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1e-114 Score=936.63 Aligned_cols=514 Identities=68% Similarity=1.067 Sum_probs=495.1
Q ss_pred ccccccccchHHHHHHHHHHHHHHHHhhhccCCCCCceeeeCCCCCeEEecCHHHHhhhccccChHHHHHHHHHHhcccc
Q 008702 13 KEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSE 92 (557)
Q Consensus 13 ~~~~~~~~~~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~a~ll~~~a~~~~~~ 92 (557)
++|+++++|.+++.+||.||.+|+++|++||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|+++
T Consensus 1 ~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~~ 80 (515)
T 3iyg_H 1 KEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAE 80 (515)
T ss_pred CCCccccCcHHHHHHHHHHHHHHHHHHhhCcCCCCCeEEEECCCCCeEEECCHHHHHHHccCCCHHHHHHHHHHHHhhce
Confidence 46778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHHHHHHhhccCccC
Q 008702 93 VGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIG 172 (557)
Q Consensus 93 ~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~~~~~l~~ia~tsl~sk~~~ 172 (557)
+||||||++||+++||+++.+++++|+||+.|++||++|++.+++.|+++++|++..+....++.|.++|+|+++||+++
T Consensus 81 ~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~s 160 (515)
T 3iyg_H 81 VGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLIS 160 (515)
T ss_pred eCcchhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCChHHHHHHHHHHHHHHhcCCccc
Confidence 99999999999999999999999999999999999999999999999999999864432223678999999999999999
Q ss_pred chhHHHHHHHHHHHHhhCCCCCCCCceeeeecCCCcccceEEEeEEEeccccCCCCCCCCccccCceEEEeecccccccc
Q 008702 173 GEKEFFASMVVDAVGAIGDGDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELELKSE 252 (557)
Q Consensus 173 ~~~~~ls~lv~~Ai~~v~~~~d~~~I~i~~i~gg~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~kIll~~~~Le~~~~ 252 (557)
.++++|++|+++|+.+++.+.|.++|+|+++.|++..||++++|++|+++|.||||.++|++++||||++++++|+++++
T Consensus 161 ~~~~~i~~livdAv~~V~~~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~p~~~~~p~~~en~kIll~~~~Le~~k~ 240 (515)
T 3iyg_H 161 QQKAFFAKMVVDAVMMLDDLLQLKMIGIKKVQGGALEESQLVAGVAFKKTFSYAGFEMQPKKYHNPMIALLNVELELKAE 240 (515)
T ss_pred ccHHHHHHHHHHHHHHhcccCCcceEEEEecCCCCccceEEEeeeEEecCccCcccccCCccccccEEEEEccccccccc
Confidence 99999999999999999743378899999999999999999999999999999999888999999999999999999999
Q ss_pred ccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhCCcccccCCChHHHHHHHHHhCCe
Q 008702 253 KENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGT 332 (557)
Q Consensus 253 ~~~~~~~i~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~lii~~~~i~~~al~~l~~~~I~~v~~v~~~~le~Ia~~tGa~ 332 (557)
+.++++.++++++++++.+.|+++++++++++.+.|++|||++++|++.+++||+++||++++++++++|+|||++|||+
T Consensus 241 e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~~~gI~~v~~~~k~~leria~~tGa~ 320 (515)
T 3iyg_H 241 KDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMMACGGS 320 (515)
T ss_pred ccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCcccHHHHHHHHHcCCcccccccHHHHHHHHHHhCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecccccCCCCCCccccceEEEEEECCeeEEEEEcCCCCceEEEEeecCCHHHHHHHHHHHHHHHHHHHHHhhCCceecCC
Q 008702 333 VQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGG 412 (557)
Q Consensus 333 ii~s~~~l~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~~~~TIll~G~t~~~l~e~k~~i~dal~~~~~~~~~g~vvpGG 412 (557)
+++++++++++++|+|+.|++.++|+++|++|+||++++.|||+|||+|+.+++|.||+++|||+++|++++++++||||
T Consensus 321 ii~~l~~~~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~~iVpGG 400 (515)
T 3iyg_H 321 IQTSVNALSSDVLGRCQVFEETQIGGERYNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGG 400 (515)
T ss_pred EeeccccCCHHHCCcccEEEEEEEcCeEEEEEecCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCeecCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998899999
Q ss_pred chhHHHHHHHHHHHHhhhcchHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHccCCCCCCCCeEEecCCCcccc
Q 008702 413 GAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIAD 492 (557)
Q Consensus 413 G~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~~~~~~~Gid~~~g~~~d 492 (557)
|++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|.. ++ .++|||+.+|++.|
T Consensus 401 Ga~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~--~~-~~~G~d~~~g~~~d 477 (515)
T 3iyg_H 401 GAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQ--GG-MWYGVDINTEDIAD 477 (515)
T ss_pred cHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhc--cC-CCeeEeCCCCcccc
Confidence 9999999999999998899999999999999999999999999999999999999999876 55 78999999999999
Q ss_pred cccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcCC
Q 008702 493 SFANFVWEPAVVKINAINAATEAACLILSVDETVKNP 529 (557)
Q Consensus 493 ~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id~iI~~~ 529 (557)
|++.|||||+.||+++|++|+|+|++|||||++|+..
T Consensus 478 m~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_H 478 NFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNP 514 (515)
T ss_pred cHhccCEECHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999754
No 5
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=2.8e-115 Score=947.08 Aligned_cols=513 Identities=38% Similarity=0.636 Sum_probs=484.4
Q ss_pred hHhhcccccccccchHHHHHHHHHHHHHHHHhhhccCCCCCceeeeCCCCCeEEecCHHHHhhhccccChHHHHHHHHHH
Q 008702 8 QIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAK 87 (557)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~a~ll~~~a~ 87 (557)
|..+|+++++..+|.+++.+|+.||.+|+++|++||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|+
T Consensus 7 ~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~ 86 (545)
T 1a6d_A 7 PILVLKEGTQREQGKNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVEHPTAKMIVEVSK 86 (545)
T ss_dssp ----------CEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECSSSCEEEECCHHHHHHHSCCCSHHHHHHHGGGG
T ss_pred cccccCCcchhhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCcHHHHHHhhhccchHHHHHHHHHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCchhHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHHHHHHhhc
Q 008702 88 SQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLS 167 (557)
Q Consensus 88 ~~~~~~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~~~~~l~~ia~tsl~ 167 (557)
+|++++||||||++|||++||+++.+++++|+||+.|++||++|++.++++|++++++ + .+ ++.|.++|+|+|+
T Consensus 87 ~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~-~-~~----~~~l~~va~tsl~ 160 (545)
T 1a6d_A 87 AQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEK-S-TD----DATLRKIALTALS 160 (545)
T ss_dssp CTTTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCEE-C-CC----HHHHHHHHHHHTT
T ss_pred hcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCC-C-CC----HHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999998 5 33 7899999999999
Q ss_pred cCccCchhHHHHHHHHHHHHhhCCC-----C-CCCCceeeeecCCCcccceEEEeEEEeccccCCCCCCCCccccCceEE
Q 008702 168 SKLIGGEKEFFASMVVDAVGAIGDG-----D-RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKIL 241 (557)
Q Consensus 168 sk~~~~~~~~ls~lv~~Ai~~v~~~-----~-d~~~I~i~~i~gg~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~kIl 241 (557)
||+.++|+++|++|+++|+.+++++ + |.++|+|++++|++++||++++|++|+++|.||+| |++++||||+
T Consensus 161 sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m---~~~ien~kIl 237 (545)
T 1a6d_A 161 GKNTGLSNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVNDTQFISGIVIDKEKVHSKM---PDVVKNAKIA 237 (545)
T ss_dssp TSSCCSTHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCSTTCEEESEEEESCCCSCTTS---CSEEEEEEEE
T ss_pred cccccccHHHHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCceeeEEEeeEEEeccCCCCCC---cceecCCEEE
Confidence 9999999999999999999999854 1 56799999999999999999999999999999987 7999999999
Q ss_pred EeeccccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhCCcccccCCChHH
Q 008702 242 LLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEED 321 (557)
Q Consensus 242 l~~~~Le~~~~~~~~~~~i~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~lii~~~~i~~~al~~l~~~~I~~v~~v~~~~ 321 (557)
+++++|++++++.++++.++++++++++.++|+++++++++++.+.|++|||++++|++.+++||.++||++++++++++
T Consensus 238 l~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~ 317 (545)
T 1a6d_A 238 LIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEGIYAVRRVKKSD 317 (545)
T ss_dssp EECSCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHHTCEEECSCCHHH
T ss_pred EEecCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCCeeEeccCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCeecccccCCCCCCccccceEEEEEECCeeEEEEEcCCCCceEEEEeecCCHHHHHHHHHHHHHHHHHHHH
Q 008702 322 LLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRR 401 (557)
Q Consensus 322 le~Ia~~tGa~ii~s~~~l~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~~~~TIll~G~t~~~l~e~k~~i~dal~~~~~ 401 (557)
|+|||++|||++++++++++++++|+|+.|++.++++++|++|+||++++.|||+|||+|+.+++|.||+++|||+++|+
T Consensus 318 le~ia~~tGa~iis~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~ 397 (545)
T 1a6d_A 318 MEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNPKAVSILIRGGTDHVVSEVERALNDAIRVVAI 397 (545)
T ss_dssp HHHHHHHHCCCEESSGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESCSSCEEEEECCSSSTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCeeecccccCCHHHCCCceEEEEEEecCceEEEEecCCCCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhCCceecCCchhHHHHHHHHHHHHhhhcchHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHccCCCCCCCCe
Q 008702 402 ATKNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPY 481 (557)
Q Consensus 402 ~~~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~~~~~~~ 481 (557)
++++|++|||||++|++|+.+|++++...++++|+++++|++||+.||++|++|||+|+.+++.+|++.|.. ++ .++
T Consensus 398 a~~~g~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~--~~-~~~ 474 (545)
T 1a6d_A 398 TKEDGKFLWGGGAVEAELAMRLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKADDEK--GR-ISV 474 (545)
T ss_dssp HHHHCEEEETTTHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHHT--TC-TTE
T ss_pred HHhCCCEEeCcCHHHHHHHHHHHHHhhccCccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhc--CC-CCc
Confidence 999999999999999999999999998889999999999999999999999999999999999999998875 55 789
Q ss_pred EEecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcCCCCC
Q 008702 482 GVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPKSE 532 (557)
Q Consensus 482 Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id~iI~~~~~~ 532 (557)
|||..+|++.||.+.|||||+.||+++|++|+|+|++||+||++|...|.+
T Consensus 475 G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~ 525 (545)
T 1a6d_A 475 GVDLDNNGVGDMKAKGVVDPLRVKTHALESAVEVATMILRIDDVIASKKST 525 (545)
T ss_dssp EEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTCCEEC------
T ss_pred ceecccCccccchhcCccccHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 999999999999999999999999999999999999999999999998776
No 6
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=5.2e-115 Score=944.44 Aligned_cols=522 Identities=39% Similarity=0.646 Sum_probs=484.4
Q ss_pred ccchhHhhcccccccccchHHHHHHHHHHHHHHHHhhhccCCCCCceeeeCCCCCeEEecCHHHHhhhccccChHHHHHH
Q 008702 4 MMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILV 83 (557)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~a~ll~ 83 (557)
|...|..+|++++++.+|.+++.+|+.||..|+++|++||||+||+|||+++.|+++|||||+|||++|+++||+|+|++
T Consensus 11 ~~~~~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~ 90 (553)
T 3ko1_A 11 PEGIPVIILKEGSSRTYGKEAVRANIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPAAKLLV 90 (553)
T ss_dssp -----------------CHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEEECTTSCEEEECCHHHHHHSSCCCSHHHHHHH
T ss_pred CCCCeEEEEecCcccchhHHHHHHHHHHHHHHHHHHHhccCCcchhhHHHhhccceEEecCccchhhhhhccChhHHHHH
Confidence 55568889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcccccCCchhHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHHHHH
Q 008702 84 DIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAA 163 (557)
Q Consensus 84 ~~a~~~~~~~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~~~~~l~~ia~ 163 (557)
++|++|++++||||||++||+++||+++.+++++|+||+.|++||++|++.++++|++++++++..+ ++.|.++|+
T Consensus 91 e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d----~e~L~~vA~ 166 (553)
T 3ko1_A 91 QIAKGQDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQELAQTVSIND----TDLLRKIAM 166 (553)
T ss_dssp HHHHTCSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCEECCTTC----HHHHHHHHH
T ss_pred HHhhCCcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHHHHHhcCCCCCCc----HHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999987544 789999999
Q ss_pred HhhccCccCchhHHHHHHHHHHHHhhCCC-----C-CCCCceeeeecCCCcccceEEEeEEEeccccCCCCCCCCccccC
Q 008702 164 TTLSSKLIGGEKEFFASMVVDAVGAIGDG-----D-RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLN 237 (557)
Q Consensus 164 tsl~sk~~~~~~~~ls~lv~~Ai~~v~~~-----~-d~~~I~i~~i~gg~~~ds~li~Givl~~~~~~~~~~~~~~~~~n 237 (557)
|+++||+.+.++++|++|+++|+.+++++ . |.++|+|+++.|+++.||++++|++|+++|.||+| |++++|
T Consensus 167 tsl~sK~~~~~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~m---~~~ien 243 (553)
T 3ko1_A 167 TSLSSKAVAGAREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSINDTQLVYGIVVDKEVVHPGM---PKRLEN 243 (553)
T ss_dssp HHHTTSSCCTTHHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCGGGCEEESEEEECSCBSCTTS---CSCCBS
T ss_pred HHhhHHhhhhHHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCccccceeeEEEEecccccCCCC---cccccc
Confidence 99999999999999999999999999864 1 67789999999999999999999999999999986 899999
Q ss_pred ceEEEeeccccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhCCcccccCC
Q 008702 238 PKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRV 317 (557)
Q Consensus 238 ~kIll~~~~Le~~~~~~~~~~~i~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~lii~~~~i~~~al~~l~~~~I~~v~~v 317 (557)
|||+++|++|++++++.++++.+++++++.++.+.|++++++++++|.+.|++|||++++|++.+++||.++||++++++
T Consensus 244 ~kIll~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~~gI~~v~~v 323 (553)
T 3ko1_A 244 AKIALIDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAKKGVLAVRRA 323 (553)
T ss_dssp CEEEEECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHHHTCEEECCC
T ss_pred ceEEEecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHHHhcchhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHhCCeecccccCCCCCCccccceEEEEEECCeeEEEEEcCCCCceEEEEeecCCHHHHHHHHHHHHHHHH
Q 008702 318 AEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIM 397 (557)
Q Consensus 318 ~~~~le~Ia~~tGa~ii~s~~~l~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~~~~TIll~G~t~~~l~e~k~~i~dal~ 397 (557)
++++|+|||++|||++++++++++++++|+|+.|++.++|+++|++|+||++++.|||+|||+|+.+++|.||+++|||+
T Consensus 324 ~k~~leria~~tGa~ivs~l~~l~~~~LG~a~~v~~~~ig~d~~~~i~g~~~~~~~TI~lrG~te~~l~E~er~l~DAl~ 403 (553)
T 3ko1_A 324 KKSDLEKLARATGGRVVSNIDEISEQDLGYASLIEERKVGEDKMVFVEGAKNPKSISILIRGGLERLVDETERALRDALG 403 (553)
T ss_dssp CHHHHHHHHTTTTCCEESCGGGCCSSSSEECSEEECCCCSSSCCEEEESCSSSSCEEEEECCSSTTHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHhhCCeeecccccCChhhcchHHHHHHhhcCcceEEEeccCCCCceEEEeeeccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhCCceecCCchhHHHHHHHHHHHHhhhcchHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHccCCCCC
Q 008702 398 IVRRATKNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGE 477 (557)
Q Consensus 398 ~~~~~~~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~~~ 477 (557)
++|+++++|++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|.. |+
T Consensus 404 ~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~--~~ 481 (553)
T 3ko1_A 404 TVADVIKDGRAIAGGGAVEIEIAKKLRKYAPQVGGKEQLAVEAYANALESLVSILIENAGFDPIDLLMKLRSTHEN--EN 481 (553)
T ss_dssp HHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTCS--GG
T ss_pred HHHHHhhcCceecCCceeEeHHHHHHHHhccccCChhHhHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHhhC--cC
Confidence 9999999999999999999999999999998899999999999999999999999999999999999999998865 32
Q ss_pred CCCeEEecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcCCCCCcc
Q 008702 478 GAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPKSESA 534 (557)
Q Consensus 478 ~~~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id~iI~~~~~~~~ 534 (557)
+.++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|...|.+.+
T Consensus 482 ~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~~~~ 538 (553)
T 3ko1_A 482 NKWYGIDLYAGQPVDMWQKGVIEPALVKMNAIKAATEAATLVLRIDDVVSAGKKSGG 538 (553)
T ss_dssp GTTEEEETTTTEEEESGGGSCEEETTHHHHHHHHHHHHHHHHHHEEEECCC------
T ss_pred CceEeEEeecCCchHHHHhCccchhhhhhhhhhhcchhheEEEehHHHHHhhhhccC
Confidence 157999999999999999999999999999999999999999999999998877655
No 7
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=3e-114 Score=939.57 Aligned_cols=518 Identities=37% Similarity=0.611 Sum_probs=483.3
Q ss_pred hhHhhcccccccccchHHHHHHHHHHHHHHHHhhhccCCCCCceeeeCCCCCeEEecCHHHHhhhccccChHHHHHHHHH
Q 008702 7 PQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIA 86 (557)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~a~ll~~~a 86 (557)
.|..+|+++++..+|.+++..|+.||.+|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|
T Consensus 5 ~~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~Akll~e~a 84 (543)
T 1a6d_B 5 QPIFILKEGTKRESGKDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGVTILKEMDVEHPAAKMMVEVS 84 (543)
T ss_dssp ---------------CHHHHHHHHHHHHHHHHHHTTSSTTCCCEEEECTTCCEEEECCHHHHHHHSCCCSHHHHHHHHHH
T ss_pred cchhhcCCcchhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHhhccchHHHHHHHHH
Confidence 45778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcccccCCchhHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHHHHHHhh
Q 008702 87 KSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTL 166 (557)
Q Consensus 87 ~~~~~~~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~~~~~l~~ia~tsl 166 (557)
++|++++||||||++|||++||+++.+++++|+||+.|++||++|++.++++|++++++++..+ ++.|.++|+|+|
T Consensus 85 ~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~----~~~l~~va~tsl 160 (543)
T 1a6d_B 85 KTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTKIGADE----KALLLKMAQTSL 160 (543)
T ss_dssp TCTTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTH----HHHHHHHHHHHH
T ss_pred HhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC----HHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999987543 789999999999
Q ss_pred ccCccCchhHHHHHHHHHHHHhhCCC-----C-CCCCceeeeecCCCcccceEEEeEEEeccccCCCCCCCCccccCceE
Q 008702 167 SSKLIGGEKEFFASMVVDAVGAIGDG-----D-RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKI 240 (557)
Q Consensus 167 ~sk~~~~~~~~ls~lv~~Ai~~v~~~-----~-d~~~I~i~~i~gg~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~kI 240 (557)
+||+.++|+++|++|+++|+.+++++ + |.++|+|++++|++++||++++|++|+++|.||+| |++++||||
T Consensus 161 ~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m---~~~ien~kI 237 (543)
T 1a6d_B 161 NSKSASVAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAIDDTQLINGIIVDKEKVHPGM---PDVVKDAKI 237 (543)
T ss_dssp TTSGGGGGHHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGGGCEEESEEEESCCCSSTTS---CSEEEEEEE
T ss_pred ccccccccHHHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCCccceeEEccEEEecCCCCCCC---cceecCCeE
Confidence 99999999999999999999999753 2 67789999999999999999999999999999986 799999999
Q ss_pred EEeeccccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhCCcccccCCChH
Q 008702 241 LLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEE 320 (557)
Q Consensus 241 ll~~~~Le~~~~~~~~~~~i~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~lii~~~~i~~~al~~l~~~~I~~v~~v~~~ 320 (557)
++++++|++++++.++++.++++++++++.+.|+++++++++++.+.|++|||++++|++.+++||.++||+++++++++
T Consensus 238 ll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~v~k~ 317 (543)
T 1a6d_B 238 ALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAGIYAVRRVKKS 317 (543)
T ss_dssp EEESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHTTCEEECSCCHH
T ss_pred EEEecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHHHHCCeeEeccCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCeecccccCCCCCCccccceEEEEEECCeeEEEEEcCCCCceEEEEeecCCHHHHHHHHHHHHHHHHHHH
Q 008702 321 DLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVR 400 (557)
Q Consensus 321 ~le~Ia~~tGa~ii~s~~~l~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~~~~TIll~G~t~~~l~e~k~~i~dal~~~~ 400 (557)
+|+|||++|||++++++++++++++|+|+.|++.++++++|++|+||++++.|||+|||+|+.+++|.||+++|||++++
T Consensus 318 ~le~ia~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~DAl~~~r 397 (543)
T 1a6d_B 318 DMDKLAKATGASIVSTIDEISSSDLGTAERVEQVKVGEDYMTFVTGCKNPKAVSILVRGETEHVVDEMERSITDSLHVVA 397 (543)
T ss_dssp HHHHHHHHHTCCEESCGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESSSSCEEEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCceecccccCCHHHCCCceEEEEEEecCceEEEEecCCCCceEEEEecCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCCceecCCchhHHHHHHHHHHHHhhhcchHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHccCCCCCCCC
Q 008702 401 RATKNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAP 480 (557)
Q Consensus 401 ~~~~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~~~~~~ 480 (557)
+++++|++|||||++|++++.+|++++...++++|+++++|++||+.||++|++|||+|+.+++.+|++.|.. |+ .+
T Consensus 398 ~a~~~~~ivpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~--~~-~~ 474 (543)
T 1a6d_B 398 SALEDGAYAAGGGATAAEIAFRLRSYAQKIGGRQQLAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAK--GN-KT 474 (543)
T ss_dssp HHHHHCEEEETTTHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHHT--TC-TT
T ss_pred HHHHCCCccCCccHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhC--CC-CC
Confidence 9999999999999999999999999998889999999999999999999999999999999999999998875 55 78
Q ss_pred eEEecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcCCCCCcc
Q 008702 481 YGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPKSESA 534 (557)
Q Consensus 481 ~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id~iI~~~~~~~~ 534 (557)
+|||+.+|++.||.+.|||||+.||+++|+.|+|+|++||+||++|...|.+.+
T Consensus 475 ~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~~~ 528 (543)
T 1a6d_B 475 YGINVFTGEIEDMVKNGVIEPIRVGKQAIESATEAAIMILRIDDVIATKSSSSS 528 (543)
T ss_dssp EEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHEEEEEC-------
T ss_pred eeEeCCCCcccchhhcCceecHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCC
Confidence 999999999999999999999999999999999999999999999998876543
No 8
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.4e-112 Score=921.99 Aligned_cols=506 Identities=36% Similarity=0.587 Sum_probs=484.6
Q ss_pred cccccchHHHHHHHHHHHHHHHHhhhccCCCCCceeeeCCCCCeEEecCHHHHhhhccccChHHHHHHHHHHhcccccCC
Q 008702 16 TDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGD 95 (557)
Q Consensus 16 ~~~~~~~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~a~ll~~~a~~~~~~~GD 95 (557)
+++++|.+++.+|+.||..|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||
T Consensus 3 ~~~~~g~~a~~~ni~a~~~la~~v~ttlGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~akll~~~a~~qd~e~GD 82 (529)
T 3iyg_A 3 GDRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGD 82 (529)
T ss_pred cchhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCChHHHHHHHHHHHhhhhhCC
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHh-hcccccCCChHHHHHHHHHHHHHhhccCccCch
Q 008702 96 GTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKE-LAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGE 174 (557)
Q Consensus 96 Gttt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~-~s~~v~~~~~~~~~~~l~~ia~tsl~sk~~~~~ 174 (557)
||||+||||++||+++.+++++|+||+.|++||+.|++.+++.|++ ++++++..+ ++.|.++|+|+++||+.+++
T Consensus 83 GTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~----~e~l~~va~tsl~sK~~~~~ 158 (529)
T 3iyg_A 83 GTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDELG----RDCLINAAKTSMSSKVIGIN 158 (529)
T ss_pred ChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCC----HHHHHHHHHHHhccCccccc
Confidence 9999999999999999999999999999999999999999999999 999987544 68999999999999999999
Q ss_pred hHHHHHHHHHHHHhhCC---C---C-CCCCceeeeecCCCcccceEEEeEEEeccccCCCCCCCCccccCceEEEeeccc
Q 008702 175 KEFFASMVVDAVGAIGD---G---D-RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIEL 247 (557)
Q Consensus 175 ~~~ls~lv~~Ai~~v~~---~---~-d~~~I~i~~i~gg~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~kIll~~~~L 247 (557)
+++|++|+++|+.++++ + + |.++|+|+++.|+++.||++++|++|++++.||+| |++++||||++++++|
T Consensus 159 ~~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~ds~lv~G~v~dk~~~~~~m---~~~ien~kIlll~~~l 235 (529)
T 3iyg_A 159 GDFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQMESMLINGYALNCVVGSQGM---PKRIVNAKIACLDFSL 235 (529)
T ss_pred HHHHHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCccceEEEeeeEEecCcccccC---CcccCCceEEEecCCc
Confidence 99999999999999973 1 1 46679999999999999999999999999999986 8899999999999999
Q ss_pred cccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhCCcccccCCChHHHHHHHH
Q 008702 248 ELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAA 327 (557)
Q Consensus 248 e~~~~~~~~~~~i~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~lii~~~~i~~~al~~l~~~~I~~v~~v~~~~le~Ia~ 327 (557)
++++++.++++.++++++++.+.+.|++++++++++|++.|++|||++++|++.+++||.++||++++++++++|+|||+
T Consensus 236 e~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~gI~av~~v~k~~leria~ 315 (529)
T 3iyg_A 236 QKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLKRDLKRIAK 315 (529)
T ss_pred ccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCceeccCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCeecccccCCC------CCCccccceEEEEEECCeeEEEEEcCCCCceEEEEeecCCHHHHHHHHHHHHHHHHHHHH
Q 008702 328 ATGGTVQTSVNNVV------DEVLGTCEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRR 401 (557)
Q Consensus 328 ~tGa~ii~s~~~l~------~~~lG~~~~v~~~~ig~~~~~~~~g~~~~~~~TIll~G~t~~~l~e~k~~i~dal~~~~~ 401 (557)
+|||++++++++++ ++++|+|+.|++.++++++|++|+||++++.|||+|||+|+.+++|.||+++|||+++|+
T Consensus 316 ~tGa~iv~~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~ 395 (529)
T 3iyg_A 316 ASGATVLSTLANLEGEETFEASMLGQAEEVVQERICDDELILIKNTKARTSASVILRGANDFMCDEMERSLHDALCVVKR 395 (529)
T ss_pred HhCCeeecchhcccchhccChhhCccceEEEEEEeCCceEEEEEcCCCCceEEEEECCchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999987764 578999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhCCceecCCchhHHHHHHHHHHHHhhhcchHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHccCCCCC----
Q 008702 402 ATKNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGE---- 477 (557)
Q Consensus 402 ~~~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~~~---- 477 (557)
++++|++|||||++|++|+.+|++++.+.++++|+++++||+||+.||++|++|||+|+.+++.+|++.|.. |+
T Consensus 396 ~v~~~~iVpGGGa~E~~ls~~L~~~~~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~--~~~~~~ 473 (529)
T 3iyg_A 396 VLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNE--AQVNPE 473 (529)
T ss_pred HhhCCeEEeCCcHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc--cccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999998865 32
Q ss_pred ---CCCeEEecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcCCC
Q 008702 478 ---GAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPK 530 (557)
Q Consensus 478 ---~~~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id~iI~~~~ 530 (557)
..++|+|+.+|++.||.+.|||||+.||+++|++|+|+|++|||||++|...|
T Consensus 474 ~~~~~~~G~d~~~g~~~d~~~~gV~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~ 529 (529)
T 3iyg_A 474 RKNLKWIGLDLVNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHP 529 (529)
T ss_pred cccCceeeeeCCCCCccChhhccCEecHHHHHHHHHHHHHHHHHHHhHHhhhcCCC
Confidence 14799999999999999999999999999999999999999999999998754
No 9
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=3.2e-112 Score=917.76 Aligned_cols=509 Identities=34% Similarity=0.537 Sum_probs=489.7
Q ss_pred ccccccchHHHHHHHHHHHHHHHHhhhccCCCCCceeeeCCC--CCeEEecCHHHHhhhccccChHHHHHHHHHHhcccc
Q 008702 15 GTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDK--GTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSE 92 (557)
Q Consensus 15 ~~~~~~~~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~--g~~~iTnDG~tIl~~l~~~hP~a~ll~~~a~~~~~~ 92 (557)
++++++|.+++.+|+.||..|+++|++||||+||+|||+++. |+++|||||+|||++|+++||+|+|++++|++||++
T Consensus 2 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~~G~~~iTnDG~tIlk~i~v~hp~Akll~e~a~~qd~e 81 (513)
T 3iyg_B 2 GADEERAETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDE 81 (513)
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEeecCCCCCCeEEECCHHHHHHHccccCHHHHHHHHHHHHhhhh
Confidence 457889999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHHHHHHhhccCccC
Q 008702 93 VGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIG 172 (557)
Q Consensus 93 ~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~~~~~l~~ia~tsl~sk~~~ 172 (557)
+||||||++||+++||+++.+++++|+||+.|++||++|++.++++|+++++|++.+ ...+++.|.++|+|+++||+.+
T Consensus 82 ~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~-~~~~~~~l~~va~tslssK~~~ 160 (513)
T 3iyg_B 82 VGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQALLNSAVDHGSD-EVKFRQDLMNIAGTTLSSKLLT 160 (513)
T ss_pred hCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCcccc-cccCHHHHHHHHHhhhcccccc
Confidence 999999999999999999999999999999999999999999999999999998732 1113789999999999999999
Q ss_pred chhHHHHHHHHHHHHhhCCCCCCCCceeeeecCCCcccceEEEeEEEeccccCCCCCCCCccccCceEEEeecccccccc
Q 008702 173 GEKEFFASMVVDAVGAIGDGDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELELKSE 252 (557)
Q Consensus 173 ~~~~~ls~lv~~Ai~~v~~~~d~~~I~i~~i~gg~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~kIll~~~~Le~~~~ 252 (557)
+++++|++|+++|+.+++++.|.++|+|+++.|++.+||++++|++|+++|.|+ ||++++||||+++|++|+++++
T Consensus 161 ~~~~~i~~livdAv~~V~~~~d~~~I~V~ki~gg~~~ds~lv~G~v~dk~~~~~----m~~~~en~kIll~~~~Le~~k~ 236 (513)
T 3iyg_B 161 HHKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSLADSYLDEGFLLDKKIGVN----QPKRIENAKILIANTGMDTDKI 236 (513)
T ss_pred cchHHHHHHHHHHHHHhcccCCcCeEEEEEeCCCCccceeEEeeEEEeccccCC----CceeecCceEEEEcCCcccccc
Confidence 999999999999999998644678999999999999999999999999999887 5899999999999999999999
Q ss_pred c-cCceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhCCcccccCCChHHHHHHHHHhCC
Q 008702 253 K-ENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGG 331 (557)
Q Consensus 253 ~-~~~~~~i~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~lii~~~~i~~~al~~l~~~~I~~v~~v~~~~le~Ia~~tGa 331 (557)
+ .++++.+++++++.++.+.|+++++++++++++.|++|||++++|++.+++||.++||++++++++.+|+|||++|||
T Consensus 237 e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~~~I~av~~~~~~~le~ia~~tGa 316 (513)
T 3iyg_B 237 KIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAGVMAIEHADFVGVERLALVTGG 316 (513)
T ss_pred cccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHcCceEEecCCHHHHHHHHHHhCC
Confidence 9 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecccccCCCCCCccccceEEEEEECCeeEEEEEcCCCCceEEEEeecCCHHHHHHHHHHHHHHHHHHHHHhhCCceecC
Q 008702 332 TVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAG 411 (557)
Q Consensus 332 ~ii~s~~~l~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~~~~TIll~G~t~~~l~e~k~~i~dal~~~~~~~~~g~vvpG 411 (557)
++++++++++++++|+|+.|++..+++++|++|+||+++++|||+|||+|+.+++|.||+++|||+++|++++++++|||
T Consensus 317 ~ii~~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpG 396 (513)
T 3iyg_B 317 EIASTFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYG 396 (513)
T ss_pred EEecccccCCHhHCCcccEEEEEEECCeEEEEEecCCCCceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCcEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred CchhHHHHHHHHHHHHhhhcchHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHccCCCCCCCCeEEecCCCccc
Q 008702 412 GGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIA 491 (557)
Q Consensus 412 GG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~~~~~~~Gid~~~g~~~ 491 (557)
||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|.. ++ .++|||+.+|++.
T Consensus 397 GGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~--~~-~~~G~d~~~g~~~ 473 (513)
T 3iyg_B 397 GGCSEMLMAHAVTQLASRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSE--GK-TTAGLDMKEGTIG 473 (513)
T ss_pred CcHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhc--CC-CceeecCCCCCcc
Confidence 99999999999999998899999999999999999999999999999999999999999876 66 7899999999999
Q ss_pred ccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcCCCC
Q 008702 492 DSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPKS 531 (557)
Q Consensus 492 d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id~iI~~~~~ 531 (557)
||++.|||||+.||+++|++|+|+|++|||||++|...|+
T Consensus 474 d~~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~~~ 513 (513)
T 3iyg_B 474 DMSVLGITESFQVKRQVLLSAAEAAEVILRVDNIIKAAPR 513 (513)
T ss_pred chHhccCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999998764
No 10
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=4.1e-112 Score=917.32 Aligned_cols=506 Identities=31% Similarity=0.552 Sum_probs=485.0
Q ss_pred ccccccchHHHHHHHHHHHHHHHHhhhccCCCCCceeeeCCCCCeEEecCHHHHhhhccccChHHHHHHHHHHhcccccC
Q 008702 15 GTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVG 94 (557)
Q Consensus 15 ~~~~~~~~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~a~ll~~~a~~~~~~~G 94 (557)
|++.++|.+++.+||.||++|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++|
T Consensus 1 ~~~~~~g~~~~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~G 80 (515)
T 3iyg_G 1 NTKRESGRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVG 80 (515)
T ss_pred CCcccchHHHHHHHHHHHHHHHHHHhcCcCCCCCeEEEECCCCCeEEECCHHHHHHhcccCCHHHHHHHHHHHHhhhhhC
Confidence 34678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHHHHHHhhccCccCch
Q 008702 95 DGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGE 174 (557)
Q Consensus 95 DGttt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~~~~~l~~ia~tsl~sk~~~~~ 174 (557)
|||||+||||++||+++.+++++|+||+.|++||++|++.++++|++++++++..+ ++.|.++|+|+++||.++.|
T Consensus 81 DGTTtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~----~~~l~~va~tsl~sK~i~~~ 156 (515)
T 3iyg_G 81 DGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDTSN----RDTMLNIINSSITTKVISRW 156 (515)
T ss_pred CChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCC----HHHHHHHHHHHhcCCchhhH
Confidence 99999999999999999999999999999999999999999999999999987654 68999999999999999999
Q ss_pred hHHHHHHHHHHHHhhCCC-C-----CCC-CceeeeecCCCcccceEEEeEEEeccccCCCCCCCCccccCceEEEeeccc
Q 008702 175 KEFFASMVVDAVGAIGDG-D-----RLN-MIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIEL 247 (557)
Q Consensus 175 ~~~ls~lv~~Ai~~v~~~-~-----d~~-~I~i~~i~gg~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~kIll~~~~L 247 (557)
.+++++++++|+..+.++ + |.+ +|+|++++||+++||++++|++|+++|.||+| |++++||||++++++|
T Consensus 157 ~~~~~~i~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~ds~lv~G~v~dk~~~~~~m---~~~ien~kIll~~~~L 233 (515)
T 3iyg_G 157 SSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPRM---RRYIKNPRIVLLDSSL 233 (515)
T ss_pred HHHHHHHHHHHHHhcccccCCCcccchhheeEEEEecCCCcccceEEeeEEEeCCCCCCCC---cceeeeeEEEEEcccc
Confidence 999999999999988732 1 332 49999999999999999999999999999864 8999999999999999
Q ss_pred cccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhCCcccccCCChHHHHHHHH
Q 008702 248 ELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAA 327 (557)
Q Consensus 248 e~~~~~~~~~~~i~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~lii~~~~i~~~al~~l~~~~I~~v~~v~~~~le~Ia~ 327 (557)
++++++.++++.+++++++.++.+.|++++++++++|.+.+++|||++++|++.+++||.++||++++++++++|+|||+
T Consensus 234 e~~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~~I~av~~~~k~~leria~ 313 (515)
T 3iyg_G 234 EYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRANITAIRRVRKTDNNRIAR 313 (515)
T ss_pred cccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHCCceeeccCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCeecccccCCCCCCccc-cceEEEEEECCeeEEEEEcCCCCceEEEEeecCCHHHHHHHHHHHHHHHHHHHHHhhCC
Q 008702 328 ATGGTVQTSVNNVVDEVLGT-CEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNS 406 (557)
Q Consensus 328 ~tGa~ii~s~~~l~~~~lG~-~~~v~~~~ig~~~~~~~~g~~~~~~~TIll~G~t~~~l~e~k~~i~dal~~~~~~~~~g 406 (557)
+|||++++++++++++++|+ |+.|++.++++++|++|+||++++.|||+|||+|+.+++|.||+++|||+++|++++++
T Consensus 314 ~tGa~ii~~l~~l~~~~LG~~a~~v~~~~~g~~~~~~i~g~~~~~~~TIllrG~t~~~l~E~er~i~Dal~~~r~~~~~~ 393 (515)
T 3iyg_G 314 ACGARIVSRPEELREEDVGTGAGLLEIKKIGDEYFTFITECKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDP 393 (515)
T ss_pred HhCCeeeccccccChhhcCCcccEEEEEEECCceEEEEeCCCCCCeEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 99999999999999999999 99999999999999999999999999999999999999999999999999999999999
Q ss_pred ceecCCchhHHHHHHHHHHHHhhhcchHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHccCCCCCCCCeEEecC
Q 008702 407 TVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDIN 486 (557)
Q Consensus 407 ~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~~~~~~~Gid~~ 486 (557)
++|||||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|.+ +.+.++|+|+.
T Consensus 394 ~ivpGGGa~e~~~~~~L~~~~~~~~g~eq~~i~~~a~Ale~ip~~La~NaG~d~~~~v~~l~~~h~~--~~~~~~G~d~~ 471 (515)
T 3iyg_G 394 QLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQ--ENCETWGVNGE 471 (515)
T ss_pred cEEeCCCHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHh--cCCCceeeeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999998865 32167999999
Q ss_pred CCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcCC
Q 008702 487 TGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNP 529 (557)
Q Consensus 487 ~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id~iI~~~ 529 (557)
+|++.||++.|||||+.||+++|++|+|+|++|||||++|...
T Consensus 472 ~g~~~d~~~~gi~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_G 472 TGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGH 514 (515)
T ss_pred CCcccccHHcCCEEcHHHHHHHHHHHHHHHHHHHHHHheeecC
Confidence 9999999999999999999999999999999999999999754
No 11
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=2.3e-113 Score=933.75 Aligned_cols=524 Identities=35% Similarity=0.578 Sum_probs=496.1
Q ss_pred Ccccc-chhHhhcccccccccchHHHHHHHHHHHHHHHHhhhccCCCCCceeeeCCCCCeEEecCHHHHhhhccccChHH
Q 008702 1 MAAMM-QPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAA 79 (557)
Q Consensus 1 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~a 79 (557)
|+.|. +.+..-|+++.+..+|.+++.+|+.||..|+++|++||||+||+|||+++.|+++|||||+|||++|+++||+|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~A 80 (559)
T 3p9d_A 1 MSQLFNNSRSDTLFLGGEKISGDDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHPAG 80 (559)
T ss_dssp -------CCCCSCCSSCEEEETHHHHHHHHHHHHHHHHHTTTTSSTTCCEEEECCSSSCCCEECCHHHHHHHHCCCSHHH
T ss_pred CCccccCCccchhhccccccchHHHHHHHHHHHHHHHHHHHhccCCCCCeeEeEcCCCCEEEECCHHHHHHHhcCCCHHH
Confidence 55653 33345589999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccccCCchhHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHh-hcccccCCChHHHHHHH
Q 008702 80 KILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKE-LAKSIEGQSLEEKKRLL 158 (557)
Q Consensus 80 ~ll~~~a~~~~~~~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~-~s~~v~~~~~~~~~~~l 158 (557)
+|++++|++|++++||||||++|||++||+++.+++++|+||+.|++||++|++.++++|++ ++++++..+ ++.|
T Consensus 81 kll~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~----~e~L 156 (559)
T 3p9d_A 81 KILVELAQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDTLG----KETL 156 (559)
T ss_dssp HHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHTGGGSCC------CTTH
T ss_pred HHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCC----HHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999 999987633 5689
Q ss_pred HHHHHHhhccCccCchhHHHHHHHHHHHHhhCC------CC-CCCCceeeeecCCCcccceEEEeEEEeccccCCCCCCC
Q 008702 159 SKCAATTLSSKLIGGEKEFFASMVVDAVGAIGD------GD-RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQ 231 (557)
Q Consensus 159 ~~ia~tsl~sk~~~~~~~~ls~lv~~Ai~~v~~------~~-d~~~I~i~~i~gg~~~ds~li~Givl~~~~~~~~~~~~ 231 (557)
.++|+|+++||++++|+++|++|+++|+.++++ .. |.+.|+|+++.|++++||++++|++|+++|.||+|
T Consensus 157 ~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~ds~lv~G~v~dk~~~~~~m--- 233 (559)
T 3p9d_A 157 INIAKTSMSSKIIGADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSATESLLVPGYALNCTVASQAM--- 233 (559)
T ss_dssp HHHHHHTTSSSGGGTTHHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSSCCBCCSEECCCCCCSSTTS---
T ss_pred HHHHHHHhccCcccchhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCccceeEeccEEEeecccCCCc---
Confidence 999999999999999999999999999999984 12 67889999999999999999999999999999986
Q ss_pred Ccccc--CceEEEeeccccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhC
Q 008702 232 PKKFL--NPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADR 309 (557)
Q Consensus 232 ~~~~~--n~kIll~~~~Le~~~~~~~~~~~i~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~lii~~~~i~~~al~~l~~~ 309 (557)
|++++ ||||++++++|++++++.++++.++++++++++.++|++++++++++|++.|++|||++++|++.+++||.++
T Consensus 234 ~~~ie~~n~kIll~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~~~ 313 (559)
T 3p9d_A 234 PKRIAGGNVKIACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEA 313 (559)
T ss_dssp CSEECSSSBCEEEETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHHHHT
T ss_pred ceeeccCCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHHc
Confidence 78999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCChHHHHHHHHHhCCeecccc------cCCCCCCccccceEEEEEECCeeEEEEEcCCCCceEEEEeecCCHH
Q 008702 310 DIFCAGRVAEEDLLRVAAATGGTVQTSV------NNVVDEVLGTCEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQ 383 (557)
Q Consensus 310 ~I~~v~~v~~~~le~Ia~~tGa~ii~s~------~~l~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~~~~TIll~G~t~~ 383 (557)
||++++++++++|+|||++|||++++++ ++++++++|+|+.|++.++++++|++|+||+++++|||+|||+|+.
T Consensus 314 ~I~av~~~~k~~le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrG~te~ 393 (559)
T 3p9d_A 314 KIMGVRRCKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILIKGTSKHSSSSIILRGANDY 393 (559)
T ss_dssp TCEEESSCCHHHHHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEEEEEEECSSCEEECEEEESSSCCCCEEEEESCHH
T ss_pred CCceEccCCHHHHHHHHHHhCCEEEeccccccccccCCHhHCccceEEEEEEEcCceEEEEEcCCCCCEEEEEEcCCCHH
Confidence 9999999999999999999999999998 7899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCceecCCchhHHHHHHHHHHHHhhhcchHHHHHHHHHHHhhhHHHHHHHhcCCCHHHH
Q 008702 384 FIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDV 463 (557)
Q Consensus 384 ~l~e~k~~i~dal~~~~~~~~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~ 463 (557)
+++|.||+++|||+++|+++++|++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.++
T Consensus 394 ~l~E~kr~l~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~v 473 (559)
T 3p9d_A 394 SLDEMERSLHDSLSVVKRTLESGNVVPGGGCVEAALNIYLDNFATTVGSREQLAIAEFAAALLIIPKTLAVNAAKDSSEL 473 (559)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSSCEECTTTTHHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHHHHHHHHHHTSSSCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCEEeCccHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
Confidence 99999999999999999999999999999999999999999999889999999999999999999999999999999999
Q ss_pred HHHHHHHccCCCCCCC------------CeEEecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcCCCC
Q 008702 464 LNKLRQKHALPTGEGA------------PYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPKS 531 (557)
Q Consensus 464 l~~l~~~~~~~~~~~~------------~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id~iI~~~~~ 531 (557)
+.+|++.|.+ ++ . ++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|...|+
T Consensus 474 v~~l~~~h~~--~~-~~~~~~~~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~ 550 (559)
T 3p9d_A 474 VAKLRSYHAA--SQ-MAKPEDVKRRSYRNYGLDLIRGKIVDEIHAGVLEPTISKVKSLKSALEACVAILRIDTMITVDPE 550 (559)
T ss_dssp HHHHHHHHHT--TS-CCC----CCCCCCCEEECTTSSSEEESTTSSCCEEHHHHHHHHHHHHHHHHHHHTEEEEEECCCC
T ss_pred HHHHHHHHhc--cc-cccccccccccccceeEECCCCcEeehhhccCEecHHHHHHHHHHHHHHHHHHHhHHhhhhcCCc
Confidence 9999998865 33 3 7999999999999999999999999999999999999999999999998877
Q ss_pred Ccc
Q 008702 532 ESA 534 (557)
Q Consensus 532 ~~~ 534 (557)
++.
T Consensus 551 ~~~ 553 (559)
T 3p9d_A 551 PPK 553 (559)
T ss_dssp CCC
T ss_pred ccc
Confidence 654
No 12
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=9.5e-113 Score=923.98 Aligned_cols=511 Identities=31% Similarity=0.514 Sum_probs=493.2
Q ss_pred hhcccccccccchHHHHHHHHHHHHHHHHhhhccCCCCCceeeeCCCCCeEEecCHHHHhhhccccChHHHHHHHHHHhc
Q 008702 10 ILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQ 89 (557)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~a~ll~~~a~~~ 89 (557)
.-++.+.+..+|.+++..|+.||..|+++|++||||+||+|||+++.|+++|||||+|||++|+++||+++|++++|++|
T Consensus 6 ~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~e~a~~q 85 (528)
T 3p9d_D 6 PSNATFKNKEKPQEVRKANIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPVARMLVEVSAAQ 85 (528)
T ss_dssp -CCCSSCBCCCHHHHHHHHHHHHHHHHHHHTTTSSTTCCCEEEECSSCCEEEECCHHHHHHHSCCCCTTHHHHHHHHHHH
T ss_pred ccccccchhcchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEECCHHHHHHHcccCCHHHHHHHHHHHHh
Confidence 44677788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHHHHHHhhccC
Q 008702 90 DSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSK 169 (557)
Q Consensus 90 ~~~~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~~~~~l~~ia~tsl~sk 169 (557)
++++||||||++||+++||+++.+++++|+||+.|++||+.|++.++++|+++++|++..+ ++.|.++|+|+++||
T Consensus 86 d~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~----~e~l~~va~tsl~sK 161 (528)
T 3p9d_D 86 DSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVSLSD----REQLVRAASTSLSSK 161 (528)
T ss_dssp HHHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCSCC----HHHHHHHHHHHSCSS
T ss_pred hhhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhhCCCCCCC----HHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999999999999987654 689999999999999
Q ss_pred ccCchhHHHHHHHHHHHHhhCCC---C-CCCCceeeeecCCCcccceEEEeEEEeccccCCCCCCCCccccCceEEEeec
Q 008702 170 LIGGEKEFFASMVVDAVGAIGDG---D-RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNI 245 (557)
Q Consensus 170 ~~~~~~~~ls~lv~~Ai~~v~~~---~-d~~~I~i~~i~gg~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~kIll~~~ 245 (557)
++++|+++|++|+++|+.++++. . |.++|+|+++.|++++||++++|++|+++|.||+| ||++++||||+++++
T Consensus 162 ~~~~~~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~~--m~~~ien~kIll~~~ 239 (528)
T 3p9d_D 162 IVSQYSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTIDDTEMIDGVVLTQTAIKSAG--GPTRKEKAKIGLIQF 239 (528)
T ss_dssp SCSTTHHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSCCCEEESSCBCCCCCCCSSS--CCSEESSEEEEEECC
T ss_pred ccchhHHHHHHHHHHHHHHhccccCCccceEEEEEEEecCCCccceEEEeeeEEeecccCccc--CcccccCceEEEEec
Confidence 99999999999999999999862 2 67889999999999999999999999999999985 689999999999999
Q ss_pred cccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcc-----cHHHHHHHHhCCcccccCCChH
Q 008702 246 ELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAI-----GDLATQYFADRDIFCAGRVAEE 320 (557)
Q Consensus 246 ~Le~~~~~~~~~~~i~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~lii~~~~i-----~~~al~~l~~~~I~~v~~v~~~ 320 (557)
+|++++++.++++.++++++++++.++|+++++++++++.+.|++|||++++| ++.+++||.++||+++++++++
T Consensus 240 ~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~~L~~~~I~av~~~~k~ 319 (528)
T 3p9d_D 240 QISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKLNIMVVKDIERE 319 (528)
T ss_dssp CSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHHHHTTTSCCEEECCCTH
T ss_pred cccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHHHHHHcCcEEEEeCCHH
Confidence 99999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred HHHHHHHHhCCeecccccCCCCCCccccceEEEEEECCeeEEEEEcCC--C-CceEEEEeecCCHHHHHHHHHHHHHHHH
Q 008702 321 DLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCP--S-GRTATIVLRGGADQFIEEAERSLHDAIM 397 (557)
Q Consensus 321 ~le~Ia~~tGa~ii~s~~~l~~~~lG~~~~v~~~~ig~~~~~~~~g~~--~-~~~~TIll~G~t~~~l~e~k~~i~dal~ 397 (557)
+|+|||++|||++++++++++++++|+|+.|++.++++++|++|+||+ + +++|||+|||+|+.+++|.||+++|||+
T Consensus 320 ~le~ia~~tGa~ii~~~~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~ 399 (528)
T 3p9d_D 320 EIEFLSKGLGCKPIADIELFTEDRLDSADLVEEIDSDGSKIVRVTGIRNNNARPTVSVVIRGANNMIIDETERSLHDALC 399 (528)
T ss_dssp HHHHHHHHHTCCCCSCSTTCCSSSEEEESCEECCEETTEECCBCTTBCCGGGCCCCEEECCCSSTTHHHHHHHHHTTTHH
T ss_pred HHHHHHHHHCCEEecccccCCHHHCCcccEEEEEEECCEEEEEEEcccccCCCceEEEEEcCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998 6 8899999999999999999999999999
Q ss_pred HHHHHhhCCceecCCchhHHHHHHHHHHHHhhhcchHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHccCCCCC
Q 008702 398 IVRRATKNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGE 477 (557)
Q Consensus 398 ~~~~~~~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~~~ 477 (557)
++|+++++|++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|.+ ++
T Consensus 400 ~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~--~~ 477 (528)
T 3p9d_D 400 VIRCLVKERGLIAGGGAPEIEISRRLSKEARSMEGVQAFIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHEN--GE 477 (528)
T ss_dssp HHHHHHHSSCEEETTTHHHHHHHHHHHHCCTTSCHHHHTTHHHHHHHHTHHHHHHHHTTSSCHHHHHHHHTTCCCS--SS
T ss_pred HHHHHHhcCCccCCCCHHHHHHHHHHHHHhhccChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc--cC
Confidence 9999999999999999999999999999988889999999999999999999999999999999999999998876 66
Q ss_pred CCCeEEecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcCC
Q 008702 478 GAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNP 529 (557)
Q Consensus 478 ~~~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id~iI~~~ 529 (557)
.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|+++
T Consensus 478 -~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 528 (528)
T 3p9d_D 478 -LNDGISVRRSGTTNTYEEHILQPVLVSTSAITLASECVKSILRIDDIAFSR 528 (528)
T ss_dssp -CCCCCCSSSSSCCCHHHHCCEEEHHHHHHHHHHHHHHHHHHHHCSCCCBCC
T ss_pred -CccceecCCCCccchHhccCeecHHHHHHHHHHHHHHHHHHHhhhHheecC
Confidence 789999999999999999999999999999999999999999999999763
No 13
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=8e-112 Score=922.13 Aligned_cols=518 Identities=32% Similarity=0.513 Sum_probs=489.0
Q ss_pred Hhhcccc--cccccchHHHHHHHHHHHHHHHHhhhccCCCCCceeeeCCCCCeEEecCHHHHhhhccccChHHHHHHHHH
Q 008702 9 IILLKEG--TDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIA 86 (557)
Q Consensus 9 ~~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~a~ll~~~a 86 (557)
..+|.++ .+..+|.+++.+|+.||..|+++|++||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|
T Consensus 29 ~~~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a 108 (562)
T 3p9d_E 29 FIIVKDQGNKKRQHGLEAKKSHILAARSVASIIKTSLGPRGLDKILISPDGEITITNDGATILSQMELDNEIAKLLVQLS 108 (562)
T ss_dssp -CCCSSBCCCSCSHHHHHHHHHHHHHHHHHHHTTTSSSTTCCEEEEECSSSCEEEESCHHHHHHHSCCCSHHHHHHHHHH
T ss_pred eEEeccCCcceecchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCEEEECCHHHHHHHccCCCHHHHHHHHHH
Confidence 3455555 36678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcccccCCchhHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHHHHHHhh
Q 008702 87 KSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTL 166 (557)
Q Consensus 87 ~~~~~~~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~~~~~l~~ia~tsl 166 (557)
++|++++||||||++|||++||+++.+++++|+||+.|++||+.|++.++++|++++++++..+...+++.|.++|+|++
T Consensus 109 ~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~e~L~~vA~tSl 188 (562)
T 3p9d_E 109 KSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDELFRDFLLRAAKTSL 188 (562)
T ss_dssp HHHHHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTTTSSSSBCCCSSCHHHHHHHHHHHH
T ss_pred HHHHhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCcchhhHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999998875421112478999999999
Q ss_pred ccCccCchhHHHHHHHHHHHHhhCCC---C-CCCCceeeeecCCCcccceEEEeEEEeccccCCCCCCCCccc------c
Q 008702 167 SSKLIGGEKEFFASMVVDAVGAIGDG---D-RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKF------L 236 (557)
Q Consensus 167 ~sk~~~~~~~~ls~lv~~Ai~~v~~~---~-d~~~I~i~~i~gg~~~ds~li~Givl~~~~~~~~~~~~~~~~------~ 236 (557)
+||+++.+.++|+++++||+..+.+. + |.++|+|+++.|++++||++++|++|+++|.||+| |+.+ +
T Consensus 189 ~sK~i~~~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds~lveGmv~dk~~~sp~m---~~~~~~~~~~~ 265 (562)
T 3p9d_E 189 GSKIVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSISDSKLINGVILDKDFSHPQM---PKCVLPKEGSD 265 (562)
T ss_dssp SSSTTTTTHHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESSSCGGGCEEESSEEESSCCCTTSC---CC-----TTCS
T ss_pred CCchhHHHHHHHHHHHHHHheeecccccCCCCcccEEEEEecCCChhhhceeeeEEEecCCCCCCc---Ccccccccccc
Confidence 99999999999999999999998763 2 78999999999999999999999999999999987 6666 8
Q ss_pred CceEEEeeccccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhCCcccccC
Q 008702 237 NPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGR 316 (557)
Q Consensus 237 n~kIll~~~~Le~~~~~~~~~~~i~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~lii~~~~i~~~al~~l~~~~I~~v~~ 316 (557)
|++|++++++|++.+++.++++.++++++++++.+.|+++++++++++++.|++|||++++|++.+++||.++||+++++
T Consensus 266 ~~kIall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vvI~~~~I~~~Al~~L~~~~I~~v~~ 345 (562)
T 3p9d_E 266 GVKLAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVICQWGFDDEANHLLLQNDLPAVRW 345 (562)
T ss_dssp SCEECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCCEECSSCCSHHHHHHHTTTCCCEEC
T ss_pred cceEEEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHHHCCCEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHhCCeecccccCCCCCCccccceEEEEEECC--eeEEEEEcCCCCceEEEEeecCCHHHHHHHHHHHHH
Q 008702 317 VAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGN--ERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHD 394 (557)
Q Consensus 317 v~~~~le~Ia~~tGa~ii~s~~~l~~~~lG~~~~v~~~~ig~--~~~~~~~g~~~~~~~TIll~G~t~~~l~e~k~~i~d 394 (557)
+++++|+|||++|||++++++++++++++|+|+.|++.++|+ ++|++|+||++++.|||+|||+|+.+++|.||+++|
T Consensus 346 v~k~~le~ia~~TGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~i~g~~~~~~~TIllrG~te~~l~E~kr~i~D 425 (562)
T 3p9d_E 346 VGGQELEHIAISTNGRIVPRFQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQSKETKTVTCFVRGSNKMIVDEAERALHD 425 (562)
T ss_dssp CCTTTHHHHHHHHCCCEEESSSCCCTTSCEECSCEEEECCSSSSCCEEEECCCSCCSCCEEEEECTTTTTHHHHTHHHHH
T ss_pred cCHHHHHHHHHHhCCEEEeccccCCHHHCCcceEEEEEEeccCCceEEEEecCCCCCeEEEEEeCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999985 899999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCceecCCchhHHHHHHHHHHHHhhhcchHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHccCC
Q 008702 395 AIMIVRRATKNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALP 474 (557)
Q Consensus 395 al~~~~~~~~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~ 474 (557)
||+++|+++++|++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|...
T Consensus 426 AL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~ 505 (562)
T 3p9d_E 426 SLCVVRNLVKDSRVVYGGGAAEVTMSLAVSEEADKQRGIDQYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKE 505 (562)
T ss_dssp HHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCcCCCCcHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999988999999999999999999999999999999999999999988641
Q ss_pred CCCCCCeEEecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcCCCC
Q 008702 475 TGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPKS 531 (557)
Q Consensus 475 ~~~~~~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id~iI~~~~~ 531 (557)
++ .++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|..++.
T Consensus 506 -~~-~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~ 560 (562)
T 3p9d_E 506 -KI-SNIGVDCLGYGSNDMKELFVVDPFIGKKQQILLATQLCRMILKIDNVIISGKD 560 (562)
T ss_dssp -TT-SSBCCBTTTTBCCBTTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEECCC-
T ss_pred -CC-CceeEecCCCcccchHhccCEEcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 33 78999999999999999999999999999999999999999999999998754
No 14
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.3e-110 Score=906.21 Aligned_cols=503 Identities=35% Similarity=0.578 Sum_probs=485.0
Q ss_pred cccccchHHHHHHHHHHHHHHHHhhhccCCCCCceeeeCCCCCeEEecCHHHHhhhccccChHHHHHHHHHHhcccccCC
Q 008702 16 TDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGD 95 (557)
Q Consensus 16 ~~~~~~~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~a~ll~~~a~~~~~~~GD 95 (557)
.+.++|.+++.+|+.||..|+++|++||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||
T Consensus 4 ~~~~~g~~~~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~~~a~~qd~~~GD 83 (518)
T 3iyg_D 4 QDRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGD 83 (518)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHhccCCCCCceeeeCCCCCeEEECCHHHHHHHcccchHHHHHHHHHHHHhhhhhCC
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHHHHHHhhccCccCchh
Q 008702 96 GTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEK 175 (557)
Q Consensus 96 Gttt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~~~~~l~~ia~tsl~sk~~~~~~ 175 (557)
||||++|||++||+++.+++++|+||+.|++||++|++.++++|+++++|++..+ ++.|.++|+|+++||+.+.|+
T Consensus 84 GTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~----~~~l~~vA~tsl~sK~~~~~~ 159 (518)
T 3iyg_D 84 GTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSD----RETLLNSAATSLNSKVVSQYS 159 (518)
T ss_pred CceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHheeeCCCCC----hHHHHHHhHhhhccccchhhH
Confidence 9999999999999999999999999999999999999999999999999987544 689999999999999999999
Q ss_pred HHHHHHHHHHHHhhCC---C-C-CCCCceeeeecCCCcccceEEEeEEEeccccCCCCCCCCccccCceEEEeecccccc
Q 008702 176 EFFASMVVDAVGAIGD---G-D-RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELELK 250 (557)
Q Consensus 176 ~~ls~lv~~Ai~~v~~---~-~-d~~~I~i~~i~gg~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~kIll~~~~Le~~ 250 (557)
++|++|+++|+.++++ + . |.++|+|+++.|++..||++++|++|+++|.| + ||.+++||||++++++|+++
T Consensus 160 ~~i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~-~---mp~~i~n~kIlll~~~Le~~ 235 (518)
T 3iyg_D 160 SLLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTIDDCELVEGLVLTQKVAN-S---GITRVEKAKIGLIQFCLSAP 235 (518)
T ss_pred HHHHHHHHHHHHHhhccccCCCcccceEEEEEcCCCChhhheEeccEEEeccccc-C---CCccccCceEEEEEeecccc
Confidence 9999999999999985 2 2 67889999999999999999999999999987 4 58899999999999999999
Q ss_pred ccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEe-----cCcccHHHHHHHHhCCcccccCCChHHHHHH
Q 008702 251 SEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLS-----RLAIGDLATQYFADRDIFCAGRVAEEDLLRV 325 (557)
Q Consensus 251 ~~~~~~~~~i~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~lii~-----~~~i~~~al~~l~~~~I~~v~~v~~~~le~I 325 (557)
+++.+.++.++++++++++.+.|+++++++++++.+.|+||||+ +++|++.+++||.++||++++++++.+|+||
T Consensus 236 k~~~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~~~I~av~~~~~~~le~i 315 (518)
T 3iyg_D 236 KTDMDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVVKDIEREDIEFI 315 (518)
T ss_pred ccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHHHcCcEEEecCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999 8999999999999999999999999999999
Q ss_pred HHHhCCeecccccCCCCCCccccceEEEEEECC-eeEEEEEcCCC-CceEEEEeecCCHHHHHHHHHHHHHHHHHHHHHh
Q 008702 326 AAATGGTVQTSVNNVVDEVLGTCEHFEERQVGN-ERFNIFSGCPS-GRTATIVLRGGADQFIEEAERSLHDAIMIVRRAT 403 (557)
Q Consensus 326 a~~tGa~ii~s~~~l~~~~lG~~~~v~~~~ig~-~~~~~~~g~~~-~~~~TIll~G~t~~~l~e~k~~i~dal~~~~~~~ 403 (557)
|++|||++++++++++++++|+|+.|++.++++ ++|++|+||++ +++|||+|||+|+.+++|.||+++|||+++|+++
T Consensus 316 a~~tGa~ii~~l~~l~~~~LG~a~~v~~~~~g~~~~~~~~~g~~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av 395 (518)
T 3iyg_D 316 CKTIGTKPVAHVDQFTADMLGSAELAEEVSLNGSGKLIKITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLV 395 (518)
T ss_pred HHHhCCEEecccccCCHHHCCcCcEEEEEEeCCCceEEEEECCCCCCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999 89999999988 8999999999999999999999999999999999
Q ss_pred hCCceecCCchhHHHHHHHHHHHHhhhcchHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHccCCCCCCCCeEE
Q 008702 404 KNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGV 483 (557)
Q Consensus 404 ~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~~~~~~~Gi 483 (557)
++|++|||||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|.. ++ .++||
T Consensus 396 ~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~--~~-~~~G~ 472 (518)
T 3iyg_D 396 KKRALIAGGGAPEIELALRLTEYSRTLSGMESYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQ--GE-KTTGI 472 (518)
T ss_pred hCCCEeecCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhc--cC-CceeE
Confidence 9999999999999999999999998899999999999999999999999999999999999999999876 55 78999
Q ss_pred ecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcCC
Q 008702 484 DINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNP 529 (557)
Q Consensus 484 d~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id~iI~~~ 529 (557)
|+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|+++
T Consensus 473 d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 518 (518)
T 3iyg_D 473 NVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKIDDVVNTR 518 (518)
T ss_pred eCCCCcccchhhccCEEcHHHHHHHHHHHHHHHHHHHhhcceEecC
Confidence 9999999999999999999999999999999999999999999763
No 15
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=8.4e-111 Score=906.58 Aligned_cols=501 Identities=27% Similarity=0.470 Sum_probs=483.2
Q ss_pred ccccchHHHHHHHHHHHHHHHHhhhccCCCCCceeeeCCCCCeEEecCHHHHhhhccccChHHHHHHHHHHhcccccCCc
Q 008702 17 DTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDG 96 (557)
Q Consensus 17 ~~~~~~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~a~ll~~~a~~~~~~~GDG 96 (557)
+..+|.+++.+||.||++|+++|++||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++|||
T Consensus 4 ~~~~~~~a~~~ni~a~~~la~~vkttlGPkG~~kml~~~~g~~~iTnDG~tIlk~i~v~hp~akll~~~a~~qd~e~GDG 83 (517)
T 3iyg_Z 4 EVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGDG 83 (517)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHHHHHHHhCCC
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHHHHHHhhccCccCchhH
Q 008702 97 TTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKE 176 (557)
Q Consensus 97 ttt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~~~~~l~~ia~tsl~sk~~~~~~~ 176 (557)
|||++||+++||+++.+++++|+||+.|++||++|++.+++.|++++++++. + ++.|.++|+|+++||+.+.+.+
T Consensus 84 TTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~-~----~~~L~~va~tsl~sKi~~~~~d 158 (517)
T 3iyg_Z 84 TTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEM-D----RETLIDVARTSLRTKVHAELAD 158 (517)
T ss_pred ceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhCcCCCC-C----HHHHHHHHHHHhccccchhHHH
Confidence 9999999999999999999999999999999999999999999999998864 3 6899999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCC---CCCCceeeeecCCCcccceEEEeEEEeccccCCCCCCCCccccCceEEEeeccccccccc
Q 008702 177 FFASMVVDAVGAIGDGD---RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELELKSEK 253 (557)
Q Consensus 177 ~ls~lv~~Ai~~v~~~~---d~~~I~i~~i~gg~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~kIll~~~~Le~~~~~ 253 (557)
+|+++++||+..+.++. |.++|+|++++||+..||++++|++|++++.||+| |++++||+|++++++|++++++
T Consensus 159 ~la~l~vdaV~~V~~~~~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~p~m---~~~ien~kIll~~~~le~~k~e 235 (517)
T 3iyg_Z 159 VLTEAVVDSILAIKKQDEPIDLFMVEIMEMKHKSETDTSLIRGLVLDHGARHPDM---KKRVEDAYILTCNVSLEYEKTE 235 (517)
T ss_pred HHHHHHHHHhheeccCCCcCChhHheeeeecCCCccccceEeeEEEeccCCCCCc---cccccCCeEEEecccccccccc
Confidence 99999999999887542 78899999999999999999999999999999985 8999999999999999999999
Q ss_pred cCceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCe---------EEEecCcccHHHHHHHHhCCcccccCCChHHHHH
Q 008702 254 ENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAK---------VVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLR 324 (557)
Q Consensus 254 ~~~~~~i~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~---------lii~~~~i~~~al~~l~~~~I~~v~~v~~~~le~ 324 (557)
.++++.++++++++++.+.|+++++..+++|...+++ |||++++|++.+++||.++||++++++++++|+|
T Consensus 236 ~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~~gI~~v~~v~~~~ler 315 (517)
T 3iyg_Z 236 VNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKEGIIALRRAKRRNMER 315 (517)
T ss_pred cceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHHHHHHCCCEEEEecCHHHHHH
Confidence 9999999999999999999999999999999988877 5889999999999999999999999999999999
Q ss_pred HHHHhCCeecccccCCCCCC-ccccceEEEEEECCeeEEEEEcCCCCceEEEEeecCCHHHHHHHHHHHHHHHHHHHHHh
Q 008702 325 VAAATGGTVQTSVNNVVDEV-LGTCEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRAT 403 (557)
Q Consensus 325 Ia~~tGa~ii~s~~~l~~~~-lG~~~~v~~~~ig~~~~~~~~g~~~~~~~TIll~G~t~~~l~e~k~~i~dal~~~~~~~ 403 (557)
||++|||+++++++++++++ +|+|+ |++.++++++|++|+||++++.|||+|||+|+.+++|.||+++|||+++|+++
T Consensus 316 ia~~tGa~iv~~l~~l~~~~~LG~a~-v~e~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~kr~l~DAl~~~r~av 394 (517)
T 3iyg_Z 316 LTLACGGIALNSLDDLNPDCLLGHAG-VYEYTLGEEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAIRDGLRAVKNAI 394 (517)
T ss_pred HHHHhCCEEecchhhCcccccCCcce-EEEEEEcCceEEEEeCCCCchhheeeecCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999 99999 99999999999999999999999999999999999999999999999999999
Q ss_pred hCCceecCCchhHHHHHHHHHHHHhhhcchHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHccCCCCCCCCeEE
Q 008702 404 KNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGV 483 (557)
Q Consensus 404 ~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~~~~~~~Gi 483 (557)
++|++|||||++|++++.+|++++.+.++++|+++++|++||+.+|++|++|||+|+.+++.+|++.|.. ++ .++||
T Consensus 395 ~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~iP~~La~NaG~d~~~~v~~l~~~h~~--~~-~~~G~ 471 (517)
T 3iyg_Z 395 DDGCVVPGAGAVEVAMAEALVKYKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSE--SG-QLVGV 471 (517)
T ss_pred hcceEecCccHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc--CC-CcEEE
Confidence 9999999999999999999999998889999999999999999999999999999999999999999875 55 78999
Q ss_pred ecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcCC
Q 008702 484 DINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNP 529 (557)
Q Consensus 484 d~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id~iI~~~ 529 (557)
|+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|.++
T Consensus 472 d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 517 (517)
T 3iyg_Z 472 DLNTGEPMVAAEAGIWDNYCVKKQLLHSCTVIATNILLVDEIMRAG 517 (517)
T ss_pred eCCCCcccchhhccCeecHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 9999999999999999999999999999999999999999999753
No 16
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.7e-110 Score=904.04 Aligned_cols=506 Identities=30% Similarity=0.503 Sum_probs=485.7
Q ss_pred cccccchHHHHHHHHHHHHHHHHhhhccCCCCCceeeeCCCCCeEEecCHHHHhhhccccChHHHHHHHHHHhcccccCC
Q 008702 16 TDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGD 95 (557)
Q Consensus 16 ~~~~~~~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~a~ll~~~a~~~~~~~GD 95 (557)
+++.+|.+++.+|+.||..|+++|++||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||
T Consensus 3 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~g~~~iTnDG~tIlk~i~~~hP~Akll~~~a~~qd~~~GD 82 (515)
T 3iyg_E 3 KSRLMGLEALKSHIMAAKAVANTMKTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGD 82 (515)
T ss_pred chhhchHHHHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCCCeEEeCcHHHHHHHcccCCHHHHHHHHHHHHhhhhhCC
Confidence 35779999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHHHHHHhhccCccCchh
Q 008702 96 GTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEK 175 (557)
Q Consensus 96 Gttt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~~~~~l~~ia~tsl~sk~~~~~~ 175 (557)
||||++|||++||+++.+++.+|+||+.|++||++|++.++++|++++++++... .+++.|.++|+|+++||+++.+.
T Consensus 83 GTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~--~~~~~l~~vA~tsl~sK~i~~~~ 160 (515)
T 3iyg_E 83 GTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKISDSVLVDM--KNTEPLIQTAKTTLGSKVVNSCH 160 (515)
T ss_pred chhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhceecCCCc--cCHHHHHHHHHHHhcccchhHHH
Confidence 9999999999999999999999999999999999999999999999999886521 13689999999999999999899
Q ss_pred HHHHHHHHHHHHhhCCC---C-CCCCceeeeecCCCcccceEEEeEEEeccccCCCCCCCCccccCceEEEeeccccccc
Q 008702 176 EFFASMVVDAVGAIGDG---D-RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELELKS 251 (557)
Q Consensus 176 ~~ls~lv~~Ai~~v~~~---~-d~~~I~i~~i~gg~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~kIll~~~~Le~~~ 251 (557)
++|+++++||+..+.+. + |.++|+|+++.|++++||++++|++|+++|.||+| |+.++||+|+++++++++.+
T Consensus 161 ~~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds~lv~G~~~dk~~~~~~m---~~~~~~~kIall~~~le~~k 237 (515)
T 3iyg_E 161 RQMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQM---PKQVEDAKIAILTCPFEPPK 237 (515)
T ss_pred HHHHHHHHHHHHhhcccccCCCCcccEEEEEecCCCcccceEEeeEEEecccccccc---cccCCCceEEEEcCcccccc
Confidence 99999999999998753 2 67899999999999999999999999999999986 78999999999999999999
Q ss_pred cccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhCCcccccCCChHHHHHHHHHhCC
Q 008702 252 EKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGG 331 (557)
Q Consensus 252 ~~~~~~~~i~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~lii~~~~i~~~al~~l~~~~I~~v~~v~~~~le~Ia~~tGa 331 (557)
++.++++.++++++++++.+.|+++++++++++.+.|++|||++++|++.+++||.++||++++++++++|+|||++|||
T Consensus 238 ~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~I~~v~~v~k~~le~ia~~tGa 317 (515)
T 3iyg_E 238 PKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLLLQNDLPAVRWVGGPEIELIAIATGG 317 (515)
T ss_pred ccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCCCEEEeccCHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecccccCCCCCCccccceEEEEEECC--eeEEEEEcCCCCceEEEEeecCCHHHHHHHHHHHHHHHHHHHHHhhCCcee
Q 008702 332 TVQTSVNNVVDEVLGTCEHFEERQVGN--ERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVV 409 (557)
Q Consensus 332 ~ii~s~~~l~~~~lG~~~~v~~~~ig~--~~~~~~~g~~~~~~~TIll~G~t~~~l~e~k~~i~dal~~~~~~~~~g~vv 409 (557)
++++++++++++++|+|+.|++.++|+ ++|++|+||++++.|||+|||+|+.+++|.||+++|||+++|+++++|++|
T Consensus 318 ~ii~~l~~l~~~~LG~a~~v~~~~ig~~k~~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iV 397 (515)
T 3iyg_E 318 RIVPRFSELTAEKLGFAGLVKEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVV 397 (515)
T ss_pred EEecccccCCHHHCCcceEEEEEEeccccceEEEEEcCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCcC
Confidence 999999999999999999999999987 899999999999999999999999999999999999999999999999999
Q ss_pred cCCchhHHHHHHHHHHHHhhhcchHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHccCCCCCCCCeEEecCCCc
Q 008702 410 AGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGG 489 (557)
Q Consensus 410 pGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~~~~~~~Gid~~~g~ 489 (557)
||||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|... ++ .++|||+.+|+
T Consensus 398 pGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~-~~-~~~G~d~~~g~ 475 (515)
T 3iyg_E 398 YGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALAENSGMNPIQTMTEVRARQVKE-VN-PALGIDCLHKG 475 (515)
T ss_pred CCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcc-CC-CeeeEecCCCc
Confidence 99999999999999999988899999999999999999999999999999999999999988641 23 68999999999
Q ss_pred ccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcC
Q 008702 490 IADSFANFVWEPAVVKINAINAATEAACLILSVDETVKN 528 (557)
Q Consensus 490 ~~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id~iI~~ 528 (557)
+.||++.|||||+.||+++|++|+|+|++|||||++|+.
T Consensus 476 ~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~ 514 (515)
T 3iyg_E 476 TNDMKHQHVIETLIGKKQQISLATQMVRMILKIDDIRKP 514 (515)
T ss_pred ccchHhccCEEcHHHHHHHHHHHHHHHHHHHhHHHhhcC
Confidence 999999999999999999999999999999999999975
No 17
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=5.6e-112 Score=922.48 Aligned_cols=516 Identities=31% Similarity=0.568 Sum_probs=488.2
Q ss_pred chhHhhcccccccccchHHHHHHHHHHHHHHHHhhhccCCCCCceeeeCCCCCeEEecCHHHHhhhccccChHHHHHHHH
Q 008702 6 QPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDI 85 (557)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~a~ll~~~ 85 (557)
++|..+|+++.+..+|.+++.+|+.||..|+++|++||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++
T Consensus 2 ~~~~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~~~hP~Akll~e~ 81 (590)
T 3p9d_C 2 QAPVVFMNASQERTTGRQAQISNITAAKAVADVIRTCLGPKAMLKMLLDPMGGLVLTNDGHAILREIDVAHPAAKSMLEL 81 (590)
T ss_dssp ----CCSCTTCCBCTTHHHHHTTHHHHHHHHHHSTTTCSSSCCCCEEECTTTCCBCCCCHHHHHHHSCCCCHHHHTHHHH
T ss_pred CCCeEeecCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECCHHHHHHHhhCCCHHHHHHHHH
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcccccCCchhHHHHHHHHHHHHHHHH-HHcCCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHHHHHH
Q 008702 86 AKSQDSEVGDGTTTVVLLAAEFLREAKPF-IEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAAT 164 (557)
Q Consensus 86 a~~~~~~~GDGttt~vvLa~~Ll~~~~~l-i~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~~~~~l~~ia~t 164 (557)
|++|++++||||||++|||++||+++.++ +++|+||+.|++||+.|++.++++|++++++++..+ ++.|.++|+|
T Consensus 82 a~~qd~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~----~e~L~~vA~t 157 (590)
T 3p9d_C 82 SRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPVDVEN----DAAMKKLIQA 157 (590)
T ss_dssp TTTHHHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHCCTTTTCC----THHHHHHHTT
T ss_pred HHhhhhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCC----HHHHHHHHHH
Confidence 99999999999999999999999999999 999999999999999999999999999999987654 5799999999
Q ss_pred hhccCccCchhHHHHHHHHHHHHhhCCCC------------CC-CCceeeeecCCCcccceEEEeEEEeccccCCCCCCC
Q 008702 165 TLSSKLIGGEKEFFASMVVDAVGAIGDGD------------RL-NMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQ 231 (557)
Q Consensus 165 sl~sk~~~~~~~~ls~lv~~Ai~~v~~~~------------d~-~~I~i~~i~gg~~~ds~li~Givl~~~~~~~~~~~~ 231 (557)
+++||+.++|+++|++|+++|+.+++++. |. ++|+|++++|+++.||++++|++|++++.++. |
T Consensus 158 slsSK~~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds~lv~Gmvfdk~~~~~~---m 234 (590)
T 3p9d_C 158 SIGTKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDSRVLKGVLLNKDVVHPK---M 234 (590)
T ss_dssp TSTTSTTGGGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGGGCBCCSSEEECCCCSCTT---S
T ss_pred HHhcccccccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCcccceeeeEEEEecccCCCC---C
Confidence 99999999999999999999999998641 22 27999999999999999999999999999874 6
Q ss_pred CccccCceEEEeeccccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhCCc
Q 008702 232 PKKFLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDI 311 (557)
Q Consensus 232 ~~~~~n~kIll~~~~Le~~~~~~~~~~~i~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~lii~~~~i~~~al~~l~~~~I 311 (557)
|++++||||++++++|++++++.++++.++++++++++.+.|+++++.++++|++.+++|||++++|++.+++||.++||
T Consensus 235 ~~~~en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~g~~vII~e~~I~d~Al~~L~k~~I 314 (590)
T 3p9d_C 235 SRHIENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVSDLAQHYLLKGGC 314 (590)
T ss_dssp CSCEESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTTCCSEECCSSCCCTHHHHHHHHTTC
T ss_pred cceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCcCHHHHHHHHhccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCChHHHHHHHHHhCCeecccccCCCCCCccc-cceEEEEEECCeeEEEEEcCCCCce------------------
Q 008702 312 FCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGT-CEHFEERQVGNERFNIFSGCPSGRT------------------ 372 (557)
Q Consensus 312 ~~v~~v~~~~le~Ia~~tGa~ii~s~~~l~~~~lG~-~~~v~~~~ig~~~~~~~~g~~~~~~------------------ 372 (557)
++++++++.+|+|||++|||+++++++++++++||+ |+.|++.++++++|++|+||++++.
T Consensus 315 ~av~~~~k~~le~ia~~TGa~iis~l~~~~~~~LG~~a~~v~~~~ig~d~~~~i~g~~~~~~~~~~~~~~~~~~~~k~~~ 394 (590)
T 3p9d_C 315 SVLRRVKKSDNNRIARVTGATIVNRVEDLKESDVGTNCGLFKVEMIGDEYFSFLDNCKEPGSGSGWSHPQFEKGSGKRRW 394 (590)
T ss_dssp CCCCCCCHHHHHHHHHHHTCCCCSCSTTCCTTSCBCCCSEEECCEETTEECEEECC------------------------
T ss_pred eeeccCCHHHHHHHHHHhCCceeecccCCCHHHhCCcCCEEEEEEEcCcEEEEEeCCCCccccccccccccccccchhhh
Confidence 999999999999999999999999999999999999 9999999999999999999987766
Q ss_pred --------------------------------------EEEEeecCCHHHHHHHHHHHHHHHHHHHHHhhCCceecCCch
Q 008702 373 --------------------------------------ATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGA 414 (557)
Q Consensus 373 --------------------------------------~TIll~G~t~~~l~e~k~~i~dal~~~~~~~~~g~vvpGGG~ 414 (557)
|||+|||+|+.+++|.||+++|||+++|+++++|++|||||+
T Consensus 395 ~~~~~~~~i~~r~~~i~~~~~~~~~~~~~~~~~l~ggv~tI~lrg~te~~l~E~kr~i~DAl~a~r~av~~~~iVpGGGa 474 (590)
T 3p9d_C 395 KKNFIAVSAANRFKKISSSGALGSGHHHHHHHHGSGKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGA 474 (590)
T ss_dssp ---------------------------------CCCSCCCEEEECSSTTTHHHHHHHHHHHHHHHHHHHHCCCEECTTTH
T ss_pred hcchhhHHHHHHHHHHHHHHhccCCHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEeCccH
Confidence 999999999999999999999999999999999889999999
Q ss_pred hHHHHHHHHHHHHhhhcchHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHccCCCCCCCCeEEecCCCcccccc
Q 008702 415 IDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSF 494 (557)
Q Consensus 415 ~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~~~~~~~Gid~~~g~~~d~~ 494 (557)
+|++++.+|.+++...++++|+++++|++||+.||++|++|||+|+.+++.+|++.|.. ++ +++|||+.+|++.||+
T Consensus 475 ~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~--~~-~~~G~d~~~g~~~dm~ 551 (590)
T 3p9d_C 475 TEMAVSVKLAEKAKQLEGIQQWPYQAVADAMECIPRTLIQNAGGDPIRLLSQLRAKHAQ--GN-FTTGIDGDKGKIVDMV 551 (590)
T ss_dssp HHHHHHHHHHHHHHHSCSTTHHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHTT--SC-TTCBCCTTSSSCBCTT
T ss_pred HHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc--CC-CCEeEeCCCCeEeehH
Confidence 99999999999998899999999999999999999999999999999999999999876 66 7899999999999999
Q ss_pred cCCcccchHHHHHHHHHHHHHHHHHhchhhhhcCCCC
Q 008702 495 ANFVWEPAVVKINAINAATEAACLILSVDETVKNPKS 531 (557)
Q Consensus 495 ~~gi~dp~~vk~~~l~~A~e~a~~lL~id~iI~~~~~ 531 (557)
+.|||||+.||+++|++|+|+|++|||||++|...|.
T Consensus 552 ~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~ 588 (590)
T 3p9d_C 552 SYGIWEPEVIKQQSVKTAIESACLLLRVDDIVSGVRK 588 (590)
T ss_dssp TTTCCEEHHHHHHHHHHHHHHHHHTTSEEEEECCCC-
T ss_pred HcCCeEcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999987764
No 18
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=2e-111 Score=915.20 Aligned_cols=517 Identities=36% Similarity=0.549 Sum_probs=491.6
Q ss_pred hhcccccccccchHHHHHHHHHHHHHHHHhhhccCCCCCceeeeC-CCCCeEEecCHHHHhhhccccChHHHHHHHHHHh
Q 008702 10 ILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHD-DKGTVTISNDGATIMKLLDIVHPAAKILVDIAKS 88 (557)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~-~~g~~~iTnDG~tIl~~l~~~hP~a~ll~~~a~~ 88 (557)
.+|+++++..+|.+++.+|+.||..|+++|++||||+||+|||++ +.|+++|||||+|||++|+++||+|+|++++|++
T Consensus 4 ~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~G~~~iTnDG~tIlk~i~~~hP~Akll~e~a~~ 83 (527)
T 3p9d_B 4 QIFGDQVTEERAENARLSAFVGAIAVGDLVKSTLGPKGMDKLLQSASSNTCMVTNDGATILKSIPLDNPAAKVLVNISKV 83 (527)
T ss_dssp CSSCSCEEEEESHHHHHHHHHHHHHHHHHHHSCSSSSCCEEEEECTTTCCEECCCCHHHHHHTCCCCCHHHHHHHHHHHH
T ss_pred ehhcCcchhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEecCCCCeEEeCCHHHHHHHhccCCHHHHHHHHHHHH
Confidence 358999999999999999999999999999999999999999999 8999999999999999999999999999999999
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHHc-CCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHHHHHHhhc
Q 008702 89 QDSEVGDGTTTVVLLAAEFLREAKPFIED-GVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLS 167 (557)
Q Consensus 89 ~~~~~GDGttt~vvLa~~Ll~~~~~li~~-gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~~~~~l~~ia~tsl~ 167 (557)
|++++||||||++|||++||+++.+++.+ |+||+.|++||++|++.++++|++++++++.+ ++.+++.|.++|+|+++
T Consensus 84 qd~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~-~~~~~~~l~~vA~tSl~ 162 (527)
T 3p9d_B 84 QDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHD-KTMFREDLIHIAKTTLS 162 (527)
T ss_dssp HHHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHHHHHHTCBCCCCC-HHHHHHHHHHHHHHHHT
T ss_pred hHhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhCccCCCc-chhhHHHHHHHHHhccc
Confidence 99999999999999999999999999999 99999999999999999999999999988753 22346899999999999
Q ss_pred cCccCchhHHHHHHHHHHHHhhCCCCCCCCceeeeecCCCcccceEEEeEEEeccccCCCCCCCCccccCceEEEeeccc
Q 008702 168 SKLIGGEKEFFASMVVDAVGAIGDGDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIEL 247 (557)
Q Consensus 168 sk~~~~~~~~ls~lv~~Ai~~v~~~~d~~~I~i~~i~gg~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~kIll~~~~L 247 (557)
||+.+.++++|++|+++|+.+++++.|.++|+|+++.|++.+||++++|++|+++|.||+ |++++||||++++++|
T Consensus 163 sK~~~~~~~~i~~li~dAv~~V~~~~~~~~I~V~k~~gg~~~ds~lv~G~~~dk~~~~~~----p~~~~n~kIlll~~~l 238 (527)
T 3p9d_B 163 SKILSQDKDHFAELATNAILRLKGSTNLEHIQIIKILGGKLSDSFLDEGFILAKKFGNNQ----PKRIENAKILIANTTL 238 (527)
T ss_dssp TSGGGGGHHHHHHHHHHHHHTTCTTCCTTSSCCCBCCCSSSSCCCEESSCCCSCCCSSSC----CSCCSSCEEEEECSCS
T ss_pred cCcccchHHHHHHHHHHHHHHhcccCCcceEEEEEcCCCCccccEEEEeEEEecccCCCC----CeeeecceEEEecccc
Confidence 999999999999999999999987546778999999999999999999999999999986 6889999999999999
Q ss_pred cccccc-cCceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhCCcccccCCChHHHHHHH
Q 008702 248 ELKSEK-ENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVA 326 (557)
Q Consensus 248 e~~~~~-~~~~~~i~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~lii~~~~i~~~al~~l~~~~I~~v~~v~~~~le~Ia 326 (557)
++++++ ++.++.+++++++.++.+.|++++++++++|.+.|++|||++++|++.+++||.++||++++++++.+|+|||
T Consensus 239 e~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~~i~av~~~~~~dle~ia 318 (527)
T 3p9d_B 239 DTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDLGINSIEHADFEGVERLA 318 (527)
T ss_dssp SCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHTCBCCCCCCHHHHHHHHH
T ss_pred ccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHCCCEEEecCCHHHHHHHH
Confidence 999998 5899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCeecccccCCCCCCccccceEEEEEECCeeEEEEEcCCCCceEEEEeecCCHHHHHHHHHHHHHHHHHHHHHhhCC
Q 008702 327 AATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNS 406 (557)
Q Consensus 327 ~~tGa~ii~s~~~l~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~~~~TIll~G~t~~~l~e~k~~i~dal~~~~~~~~~g 406 (557)
++|||++++++++++++++|+|+.|++..+++++|++|+||+++++|||+|||+|+.+++|.||+++|||+++|+++++|
T Consensus 319 ~~tGa~iv~~~~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~g 398 (527)
T 3p9d_B 319 LVTGGEVVSTFDEPSKCKLGECDVIEEIMLGEQPFLKFSGCKAGEACTIVLRGATDQTLDEAERSLHDALSVLSQTTKET 398 (527)
T ss_dssp HHTCCCCCSTTSCCTTSCEECSBCCBCCCSSSCCBCCBCSSCCSCCEECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHCC
T ss_pred HHhCCEEecchhhCCHHHCCCCcEEEEEEecceEEEEEECCCCCCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceecCCchhHHHHHHHHHHHHhhhcchHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHccCCCCCCCCeEEecC
Q 008702 407 TVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDIN 486 (557)
Q Consensus 407 ~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~~~~~~~Gid~~ 486 (557)
++|||||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|.. |+ .++|||+.
T Consensus 399 ~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~--~~-~~~G~d~~ 475 (527)
T 3p9d_B 399 RTVLGGGCAEMVMSKAVDTEAQNIDGKKSLAVEAFARALRQLPTILADNAGFDSSELVSKLRSSIYN--GI-STSGLDLN 475 (527)
T ss_dssp CEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCSHHHHHHHHHHHHH--TC-SCCCCCSS
T ss_pred CcccCCcHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhc--CC-CceeEECC
Confidence 9999999999999999999998889999999999999999999999999999999999999999876 55 78999999
Q ss_pred CCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcCCCCCcc
Q 008702 487 TGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPKSESA 534 (557)
Q Consensus 487 ~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id~iI~~~~~~~~ 534 (557)
+|++.||++.|||||+.||+++|++|+|+|++|||||++|...|+++.
T Consensus 476 ~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~~~~ 523 (527)
T 3p9d_B 476 NGTIADMRQLGIVESYKLKRAVVSSASEAAEVLLRVDNIIRARPRTAN 523 (527)
T ss_dssp STTCCCHHHHTCEEETTHHHHHHHHHHHHHHHHHHCCEEEEEC-----
T ss_pred CCCCcchHhccCEEcHHHHHHHHHHHHHHHHHHHhHHHHHhcCCcccC
Confidence 999999999999999999999999999999999999999998877654
No 19
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=2.3e-111 Score=919.65 Aligned_cols=520 Identities=26% Similarity=0.439 Sum_probs=478.5
Q ss_pred hhHhhcccccccccc-hHHHHHHHHHHHHHHHHhhhccCCCCCceeeeCCCCCeEEecCHHHHhhhccccChHHHHHHHH
Q 008702 7 PQIILLKEGTDTSQG-KAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDI 85 (557)
Q Consensus 7 ~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~a~ll~~~ 85 (557)
+...+|++|++++.| .+++.+|+.||..|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++
T Consensus 9 ~~~~~l~~~~~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~Akll~e~ 88 (568)
T 3p9d_H 9 PNAGLFKQGYNSYSNADGQIIKSIAAIRELHQMCLTSMGPCGRNKIIVNHLGKIIITNDAATMLRELDIVHPAVKVLVMA 88 (568)
T ss_dssp CCCSSCCSSCCBCCCHHHHHHHHHHHHHHHHHHHHTTSSSSSCEEEEECTTSCEEEESCHHHHTTTCCCCCHHHHHHHHH
T ss_pred chhhhhhcCccccccHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHHHHHHHHH
Confidence 568889999999888 5799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcccccCCchhHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHHHHHHh
Q 008702 86 AKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATT 165 (557)
Q Consensus 86 a~~~~~~~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~~~~~l~~ia~ts 165 (557)
|++|++++||||||++||+++||+++.+++++|+||+.|++||+.|++.++++|+++++++..+. .+++.|.++|+|+
T Consensus 89 a~~qd~e~GDGTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~L~~~a~~v~~~~--~~~~~l~~va~ts 166 (568)
T 3p9d_H 89 TEQQKIDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEMVVGEITDK--NDKNELLKMIKPV 166 (568)
T ss_dssp HHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCCSCCCCC--CTTHHHHHHHHHH
T ss_pred HHhhhceeCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCC--CCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998762210 1267999999999
Q ss_pred hccCccCchhHHHHHHHHHHHHhhCCC--------C-CCCCceeeeecCCCcccceEEEeEEEeccccCCCCCCCCcccc
Q 008702 166 LSSKLIGGEKEFFASMVVDAVGAIGDG--------D-RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFL 236 (557)
Q Consensus 166 l~sk~~~~~~~~ls~lv~~Ai~~v~~~--------~-d~~~I~i~~i~gg~~~ds~li~Givl~~~~~~~~~~~~~~~~~ 236 (557)
++||+.+++ ++|++|+++|+.+++++ + |+++|+|+++.|++++||++++|++|++++. .||++++
T Consensus 167 l~sK~~~~~-~~i~~livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~dS~lv~G~v~dk~~~-----~m~~~i~ 240 (568)
T 3p9d_H 167 ISSKKYGSE-DILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLSNSTVIKGMVFNREPE-----GHVKSLS 240 (568)
T ss_dssp HTTTSTTCH-HHHHHHHHHHHTTSCC---------CCCGGGCEEEEEESSCGGGCEEESSCCBSSCBS-----SGGGSCC
T ss_pred hhccCcchH-HHHHHHHHHHHHHHhhccccccCCcccccceEEEEEccCCCcchheeeccEEEeeccc-----CCcEEEe
Confidence 999998877 99999999999999763 2 5678999999999999999999999999984 3689999
Q ss_pred ---CceEEEeeccccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhCCccc
Q 008702 237 ---NPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFC 313 (557)
Q Consensus 237 ---n~kIll~~~~Le~~~~~~~~~~~i~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~lii~~~~i~~~al~~l~~~~I~~ 313 (557)
||||++++++|++++++.++++.+++++++.++.++|++++++++++|++.|++|||++++|++.+++||.++||++
T Consensus 241 ~~~n~kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~~al~~L~~~gI~a 320 (568)
T 3p9d_H 241 EDKKHKVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVGELALHYLNRYGILV 320 (568)
T ss_dssp CCSSCEEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECSCCCHHHHHHHHHHTCEE
T ss_pred cCCcceEEEEccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEECCCcChHHHHHHHHCCeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCChHHHHHHHHHhCCeecccccCCCCCCccccceEEEEEECCeeEEEEEcCC--CCceEEEEeecCCHHHHHHHHHH
Q 008702 314 AGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCP--SGRTATIVLRGGADQFIEEAERS 391 (557)
Q Consensus 314 v~~v~~~~le~Ia~~tGa~ii~s~~~l~~~~lG~~~~v~~~~ig~~~~~~~~g~~--~~~~~TIll~G~t~~~l~e~k~~ 391 (557)
++++++.+|+|||++|||++++++++++++++|+|+.|++.++|+++|++|+||+ ++++|||+|||+|+.+++|.||+
T Consensus 321 v~~v~~~~leria~~tGa~ivs~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~l~~~~~TIllrG~t~~~l~E~er~ 400 (568)
T 3p9d_H 321 LKVPSKFELRRLCRVCGATPLPRLGAPTPEELGLVETVKTMEIGGDRVTVFKQEQGEISRTSTIILRGATQNNLDDIERA 400 (568)
T ss_dssp ECCCCHHHHHHHHHHHSCCCCSSSSCCCGGGCEECSCCCCCEETTEECBCCCCCSSSCCSSCEEEEEESCHHHHHHHHHH
T ss_pred EecCCHHHHHHHHHHhCCEEEeccccCCHHHCCcceEEEEEEecCceEEEEecCCCCCCCeEEEEECCCcHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998 78999999999999999999999
Q ss_pred HHHHHHHHHHHhh--CCceecCCchhHHHHHHHHHHHHhhhcchHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHH
Q 008702 392 LHDAIMIVRRATK--NSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQ 469 (557)
Q Consensus 392 i~dal~~~~~~~~--~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~ 469 (557)
++|||+++|++++ ++++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++
T Consensus 401 i~DAL~vvr~av~~~d~~iVpGGGa~E~~ls~~L~~~a~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~ 480 (568)
T 3p9d_H 401 IDDGVAAVKGLMKPSGGKLLPGAGATEIELISRITKYGERTPGLLQLAIKQFAVAFEVVPRTLAETAGLDVNEVLPNLYA 480 (568)
T ss_dssp HHHHHHHHHHTTSTTCCCCCCTTTHHHHHHHHHHHHHHHTCCSTHHHHHHHHHHGGGHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCCeEEeCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 9999999999999 88999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HccCC------CCCCCCeEEecCCCc---ccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcCCCCCccc
Q 008702 470 KHALP------TGEGAPYGVDINTGG---IADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPKSESAQ 535 (557)
Q Consensus 470 ~~~~~------~~~~~~~Gid~~~g~---~~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id~iI~~~~~~~~~ 535 (557)
.|..+ +++ .++|||+.+|+ +.||++.|||||+.||+++|+.|+|+|++|||||++|...|...|.
T Consensus 481 ~h~~~~~~~~~~~~-~~~G~d~~~g~~~~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~~~~~ 554 (568)
T 3p9d_H 481 AHNVTEPGAVKTDH-LYKGVDIDGESDEGVKDIREENIYDMLATKKFAINVATEAATTVLSIDQIIMAKKAGGPR 554 (568)
T ss_dssp CCCCSSCCCCCCTT-SSSCCCHHHHTCCCCHHHHHHHHHHHHHHHHHHHHCCEECBCCC----------------
T ss_pred HhhhhcccccccCC-CceeEcccCCCcccccChHHccCEEcHHHHHHHHHHHHHHHHHHHhHHHHhhccccCCCC
Confidence 88541 133 68999999997 9999999999999999999999999999999999999988766543
No 20
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.5e-108 Score=889.78 Aligned_cols=502 Identities=27% Similarity=0.439 Sum_probs=479.7
Q ss_pred cccccccc-hHHHHHHHHHHHHHHHHhhhccCCCCCceeeeCCCCCeEEecCHHHHhhhccccChHHHHHHHHHHhcccc
Q 008702 14 EGTDTSQG-KAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSE 92 (557)
Q Consensus 14 ~~~~~~~~-~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~a~ll~~~a~~~~~~ 92 (557)
+|+++..| .+++.+|+.||.+|+++|++||||+||+|||+++.|+|+|||||+|||++|+++||+|+|++++|++|+++
T Consensus 1 ~~~~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~~ 80 (512)
T 3iyg_Q 1 EGAKHFSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHPAAKMIVMASHMQEQE 80 (512)
T ss_pred CCccccCCHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHHHHHHHHHHHHhhhh
Confidence 46788899 79999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhcc--cccCCChHHHHHHHHHHHHHhhccCc
Q 008702 93 VGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAK--SIEGQSLEEKKRLLSKCAATTLSSKL 170 (557)
Q Consensus 93 ~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~--~v~~~~~~~~~~~l~~ia~tsl~sk~ 170 (557)
+||||||++||+++||+++.+++++|+||+.|++||++|++.++++|+++++ +.+..+ ++.|.++|+|+++||+
T Consensus 81 ~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~~~~~~~~~~~----~~~l~~va~tsl~sK~ 156 (512)
T 3iyg_Q 81 VGDGTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEILPDLVCCSAKNLRD----VDEVSSLLHTSVMSKQ 156 (512)
T ss_pred hCCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCC----HHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999999999999999999999854 333333 6899999999999998
Q ss_pred cCchhHHHHHHHHHHHHhhCCCC---CCCCceeeeecCCCcccceEEEeEEEeccccCCCCCCCCccccCceEEEeeccc
Q 008702 171 IGGEKEFFASMVVDAVGAIGDGD---RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIEL 247 (557)
Q Consensus 171 ~~~~~~~ls~lv~~Ai~~v~~~~---d~~~I~i~~i~gg~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~kIll~~~~L 247 (557)
.+ ++++|++|+++|+.++++++ |.++|+|.++.|+++.||++++|++|+++|.+ ||++++||+|+++++++
T Consensus 157 ~~-~~~~i~~livdAv~~V~~~~~~i~v~~I~i~k~~Ggs~~ds~lv~G~~~dk~~~~-----~~~~~~n~kI~ll~~~l 230 (512)
T 3iyg_Q 157 YG-NEVFLAKLIAQACVSIFPDSGHFNVDNIRVCKILGSGVHSSSVLHGMVFKKETEG-----DVTSVKDAKIAVYSCPF 230 (512)
T ss_pred cc-chHHHHHHHHHHHHHHhccCCcccHhHeeEeeccCCCcccceEEeeEEEecCcCC-----CCcccccCceEEEeccc
Confidence 65 78999999999999998752 67889999999999999999999999999864 48999999999999999
Q ss_pred cccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhCCcccccCCChHHHHHHHH
Q 008702 248 ELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAA 327 (557)
Q Consensus 248 e~~~~~~~~~~~i~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~lii~~~~i~~~al~~l~~~~I~~v~~v~~~~le~Ia~ 327 (557)
++.+++.+.++.+++++++.++.+.|+++++.+++++.+.|++||+++++|++++++||+++||++++++++.+|+|||+
T Consensus 231 e~~~~e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k~~I~av~~~~~~dle~ia~ 310 (512)
T 3iyg_Q 231 DGMITETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYANKYNIMLVRLNSKWDLRRLCK 310 (512)
T ss_pred ccccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCCeEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCeecccccCCCCCCccccceEEEEEECCeeEEEEEcCC-CCceEEEEeecCCHHHHHHHHHHHHHHHHHHHHHhhCC
Q 008702 328 ATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCP-SGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNS 406 (557)
Q Consensus 328 ~tGa~ii~s~~~l~~~~lG~~~~v~~~~ig~~~~~~~~g~~-~~~~~TIll~G~t~~~l~e~k~~i~dal~~~~~~~~~g 406 (557)
+|||++++++++++++++|+|+.|++.++|+++|++|++|+ .+++|||+|||+|+.+++|.||+++|||+++|+++++|
T Consensus 311 ~tGa~iis~l~~~~~~~LG~a~~v~~~~~g~~~~~~~~~~~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~ 390 (512)
T 3iyg_Q 311 TVGATALPRLNPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKEDGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDK 390 (512)
T ss_pred HhCCEEecccccCCHHHCCcccEEEEEEeCCeEEEEEEcccCCCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999997 47899999999999999999999999999999999999
Q ss_pred ceecCCchhHHHHHHHHHHHHhhhcchHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHccCCCCCCCCeEEecC
Q 008702 407 TVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDIN 486 (557)
Q Consensus 407 ~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~~~~~~~Gid~~ 486 (557)
++|||||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|.. ++ .++|||+.
T Consensus 391 ~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~--~~-~~~G~d~~ 467 (512)
T 3iyg_Q 391 RLVPGGGATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQE--GN-KNVGLDIE 467 (512)
T ss_pred CEecCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhc--CC-CcEEEecC
Confidence 9999999999999999999998899999999999999999999999999999999999999999876 66 78999999
Q ss_pred CC--cccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcC
Q 008702 487 TG--GIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKN 528 (557)
Q Consensus 487 ~g--~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id~iI~~ 528 (557)
+| ++.||++.|||||+.||+++|++|+|+|++|||||++|++
T Consensus 468 ~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~ 511 (512)
T 3iyg_Q 468 AEVPAVKDMLEAGVLDTYLGKYWAIKLATNAAVTVLRVDQIIMA 511 (512)
T ss_pred CCCCcccchHhccCeEcHHHHHHHHHHHHHHHHHHHhHhHheec
Confidence 65 9999999999999999999999999999999999999975
No 21
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=2.1e-110 Score=910.00 Aligned_cols=517 Identities=27% Similarity=0.453 Sum_probs=488.1
Q ss_pred hhcccccccccchHHHHHHHHHHHHHHHHhhhccCCCCCceeeeCCCCCeEEecCHHHHhhhccccChHHHHHHHHHHhc
Q 008702 10 ILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQ 89 (557)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~a~ll~~~a~~~ 89 (557)
.+++++++..+|.+++..||.||.+|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+++|++++|++|
T Consensus 4 ~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~e~a~~q 83 (546)
T 3p9d_F 4 QLLNPKAESLRRDAALKVNVTSAEGLQSVLETNLGPKGTLKMLVDGAGNIKLTKDGKVLLTEMQIQSPTAVLIARAAAAQ 83 (546)
T ss_dssp CSSCTTEEEEEHHHHHHHHHHHHTHHHHHHTTTSSTTCCEEEEECTTSCEEEECCHHHHHHTSCCCCHHHHHHHHHHHHH
T ss_pred cccCCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHHHH
Confidence 35788889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHHHHHHhhccC
Q 008702 90 DSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSK 169 (557)
Q Consensus 90 ~~~~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~~~~~l~~ia~tsl~sk 169 (557)
++++||||||++|||++||+++.+++++|+||+.|++||+.|++.++++|++++++++.+. .+++.|.++|+|+++||
T Consensus 84 d~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~--~~~~~L~~vA~tsl~sK 161 (546)
T 3p9d_F 84 DEITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKFLDEFKISKTNLS--NDREFLLQVARSSLLTK 161 (546)
T ss_dssp HHHCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHHCCCCSSSS--TTCHHHHHHHHHHTCST
T ss_pred HHHhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhhccccccc--cCHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999999999999999999999999999999886410 12579999999999999
Q ss_pred ccCchhHHHHHHHHHHHHhhCCC---C-CCCCceeeeecCCCcccceEEEeEEEeccccCCCCCCCCccccCceEEEeec
Q 008702 170 LIGGEKEFFASMVVDAVGAIGDG---D-RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNI 245 (557)
Q Consensus 170 ~~~~~~~~ls~lv~~Ai~~v~~~---~-d~~~I~i~~i~gg~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~kIll~~~ 245 (557)
+.+.+.++|+++++||+..+.+. + |+++|+|++++|+...||++++|++|++++.||+ ||++++||||++++|
T Consensus 162 i~~~~~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~~~ds~lv~G~v~dk~~~~~~---m~~~~en~kIll~~~ 238 (546)
T 3p9d_F 162 VDADLTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLSPKDTTFIKGLVLDHGGRHPD---MPTRVKNAYVLILNV 238 (546)
T ss_dssp THHHHCSSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSCTTTCCCCSSCEESCCCCSSS---SCSSBCSCCCCEECC
T ss_pred cchhHHHHHHHHHHHhheEeecCCCCcccchheEEEEecCCCccccEEEeeEEEeccccccc---CcceecCceEEEecC
Confidence 99899999999999999988632 2 7889999999999999999999999999999986 589999999999999
Q ss_pred cccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcC----------CeEEEecCcccHHHHHHHHhCCccccc
Q 008702 246 ELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSG----------AKVVLSRLAIGDLATQYFADRDIFCAG 315 (557)
Q Consensus 246 ~Le~~~~~~~~~~~i~~~~~~~~~~~~E~~~i~~~v~~i~~~~----------~~lii~~~~i~~~al~~l~~~~I~~v~ 315 (557)
+|++++++.++++.++++++++++.+.|+++++..+++|...+ ++|||++++|++.+++||.++||++++
T Consensus 239 ~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~gI~~vr 318 (546)
T 3p9d_F 239 SLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHNILALR 318 (546)
T ss_dssp CSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESSCCCHHHHHHHTTTTCEEEC
T ss_pred cccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcHHHHHHHHHCCCeeEe
Confidence 9999999999999999999999999999999999999998754 239999999999999999999999999
Q ss_pred CCChHHHHHHHHHhCCeecccccCCCCCCccccceEEEEEECCeeEEEEEcCCCCceEEEEeecCCHHHHHHHHHHHHHH
Q 008702 316 RVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDA 395 (557)
Q Consensus 316 ~v~~~~le~Ia~~tGa~ii~s~~~l~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~~~~TIll~G~t~~~l~e~k~~i~da 395 (557)
++++++|+|||++|||++++++++++++++|+|+.|++.++++++|++|+||++++.|||+|||+|+.+++|.||+++||
T Consensus 319 ~v~~~~leria~~tGa~ii~~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~tI~lrG~te~~l~E~kr~l~DA 398 (546)
T 3p9d_F 319 RAKRRNMERLQLVTGGEAQNSVEDLSPQILGFSGLVYQETIGEEKFTYVTENTDPKSCTILIKGSTHYALAQTKDAVRDG 398 (546)
T ss_dssp CCCHHHHHHHHHTTTBCCCCCCSSCSTTCCBCCCCBCBCCCSSCCCEECSSCSCCSCEEEECCCSCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHhCCEEecchhhCCHhHCCcccEEEEEEecCceEEEEecCCCCceEEEEECCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCceecCCchhHHHHHHHHHH---HHhhhcchHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHcc
Q 008702 396 IMIVRRATKNSTVVAGGGAIDMEISKYLRQ---ESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHA 472 (557)
Q Consensus 396 l~~~~~~~~~g~vvpGGG~~e~~l~~~L~~---~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~ 472 (557)
|+++|+++++|++|||||++|++++.+|++ |+...++++|+++++|++||+.||++|++|||+|+.+++.+|++.|.
T Consensus 399 l~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~ 478 (546)
T 3p9d_F 399 LRAVANVLKDKNIIPGAGAFYIALSRYLRSANMNKLGAKGKTKTGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVEDELD 478 (546)
T ss_dssp HHHHHHHTTSCCEEETTTHHHHHHHHHHHHHHTTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHH
T ss_pred HHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhhhhhhcCchHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhh
Confidence 999999999999999999999999999999 57888999999999999999999999999999999999999998886
Q ss_pred C---CCCCCCCeEEecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcCCCCC
Q 008702 473 L---PTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPKSE 532 (557)
Q Consensus 473 ~---~~~~~~~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id~iI~~~~~~ 532 (557)
. +++. .++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|+.++..
T Consensus 479 ~~~~~~~~-~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~~~~~ 540 (546)
T 3p9d_F 479 DAQDSDET-RYVGVDLNIGDSCDPTIEGIWDSYRVLRNAITGATGIASNLLLCDELLRAGRST 540 (546)
T ss_dssp HHTTSTTS-SCCCCBTTTTBCCCSGGGTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECCSS
T ss_pred hhhcccCC-ceeeEeCCCCeecchHhccCEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc
Confidence 1 0022 679999999999999999999999999999999999999999999999876543
No 22
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=1.2e-104 Score=856.22 Aligned_cols=475 Identities=35% Similarity=0.582 Sum_probs=382.6
Q ss_pred eeeCCCCCeEEecCHHHHhhhccccChHHHHHHHHHHhcccccCCchhHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHH
Q 008702 51 LIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRN 130 (557)
Q Consensus 51 ~i~~~~g~~~iTnDG~tIl~~l~~~hP~a~ll~~~a~~~~~~~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~ 130 (557)
||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||||||++|||++||+++.+++++|+||+.|++||++
T Consensus 1 mlv~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~G~~~ 80 (500)
T 3aq1_B 1 MLVDSMGDIVITNDGATILKEMDIQHPAAKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISEGYRH 80 (500)
T ss_dssp ------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred CccCCCCCeEEECcHHHHHHhCcCCCHHHHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccccCCChHHHHHHHHHHHHHhhccCccCchhHHHHHHHHHHHHhhCCC--C----C-CCCceeeee
Q 008702 131 ASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIGDG--D----R-LNMIGIKKV 203 (557)
Q Consensus 131 a~~~~~~~L~~~s~~v~~~~~~~~~~~l~~ia~tsl~sk~~~~~~~~ls~lv~~Ai~~v~~~--~----d-~~~I~i~~i 203 (557)
|++.+++.|++++++++..+ ++.|.++|+|+|+||+.++|+++|++|+++|+.+++++ . | .++|+|+++
T Consensus 81 A~~~a~~~L~~~s~~v~~~d----~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~ 156 (500)
T 3aq1_B 81 AAEKCREILETITIAISPDD----EAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKR 156 (500)
T ss_dssp HHHHHHHHHHHHCEECCTTC----HHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEE
T ss_pred HHHHHHHHHHHhcCCCCCCc----HHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEe
Confidence 99999999999999987644 78999999999999999999999999999999999754 1 4 677999999
Q ss_pred cCCCcccceEEEeEEEeccccCCCCCCCCccccCceEEEeeccccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHH
Q 008702 204 PGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDK 283 (557)
Q Consensus 204 ~gg~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~kIll~~~~Le~~~~~~~~~~~i~~~~~~~~~~~~E~~~i~~~v~~ 283 (557)
+|++++||++++|++|+++|.||+| |++++||||++++++|++++++.++++.++++++++++.++|++++++++++
T Consensus 157 ~G~~~~ds~lv~G~v~dk~~~~~~m---~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~ 233 (500)
T 3aq1_B 157 AGGSIDDSELIDGLVIDKERSHPNM---PEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMREMAEK 233 (500)
T ss_dssp ESSCGGGCEEESEEEESCCCSSTTS---CSEEEEEEEEEESSCBCC-------------------------CHHHHHHHH
T ss_pred cCCCccceEEEeeeEEeecCCCCCC---cccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999986 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCeEEEecCcccHHHHHHHHhCCcccccCCChHHHHHHHHHhCCeecccccCCCCCCccccceEEEEEECCeeEEE
Q 008702 284 CVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNI 363 (557)
Q Consensus 284 i~~~~~~lii~~~~i~~~al~~l~~~~I~~v~~v~~~~le~Ia~~tGa~ii~s~~~l~~~~lG~~~~v~~~~ig~~~~~~ 363 (557)
+.+.|++|||++++|++.+++||.++||++++++++++|+|||++|||++++++++++++++|+|+.|++.++|+++|++
T Consensus 234 I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~iis~l~~~~~~~LG~a~~v~~~~ig~~~~~~ 313 (500)
T 3aq1_B 234 VIASGANVVFCQKGIDDMAQYYIEKAGIYAVRRVKKSDLKRLSKVTGATIIQDLDQITTEDVGTAGLVEEKEVRGGKMTY 313 (500)
T ss_dssp HHTTCCSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHCCCCBSCTTCCCSTTCEEEEEEEEEECSSSEEEE
T ss_pred HHHhCcCEEEECCCcCHHHHHHHHHCCEEEEEeCCHHHHHHHHHHhCCeEecccccCCHhHCCCceEEEEEEecCeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCceEEEEeecCCHHHHHHHHHHHHHHHHHHHHHhhCCceecCCchhHHHHHHHHHHHHhhhcchHHHHHHHHHH
Q 008702 364 FSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAK 443 (557)
Q Consensus 364 ~~g~~~~~~~TIll~G~t~~~l~e~k~~i~dal~~~~~~~~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~ 443 (557)
|+||++++.|||+|||+|+.+++|.||+++|||+++|+++++|++|||||++|++++.+|++++.+.++++|+++++|++
T Consensus 314 ~~g~~~~~~~TI~lrG~t~~~l~E~er~l~Dal~~~r~~~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ 393 (500)
T 3aq1_B 314 VTGCQNSKAVTVLLHGGTEHVVDSLDHALNDALHVVGVVIEDGKVVVGGGSSEVELSLRLSEYASTLKGREQLAVSKFAE 393 (500)
T ss_dssp EEEETTCCCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHSEEEETTTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHH
T ss_pred EECCCCCceEEEEecCCcHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHHhhhcCchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998889999999999999
Q ss_pred HhhhHHHHHHHhcCCCHHHHHHHHHHHccCCCCCCCCeEEecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchh
Q 008702 444 ALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVD 523 (557)
Q Consensus 444 aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~~~~~~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id 523 (557)
||+.||++|++|||+|+.+++.+|++.|.+ |+ .++|||..+|++.||.+.|||||+.||+++|++|+|+|++||+||
T Consensus 394 ALe~ip~~La~NaG~d~~~~v~~l~~~h~~--~~-~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD 470 (500)
T 3aq1_B 394 ALEVIPVALAENAGLDPIDIMVELRSQHEK--GN-KNAGLNVYTGEVVDMWENDVIEPLRIKTQAINAAMEATVMILRID 470 (500)
T ss_dssp HTTHHHHHHHHHTTCCHHHHHHHHHHHHHT--TC-TTEEECTTTCCEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHhcC--CC-CCeeEeCCCCCccchHhcCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998876 55 789999999999999999999999999999999999999999999
Q ss_pred hhhcCCCCCccc
Q 008702 524 ETVKNPKSESAQ 535 (557)
Q Consensus 524 ~iI~~~~~~~~~ 535 (557)
++|...|.+++.
T Consensus 471 ~iI~~~~~~~~~ 482 (500)
T 3aq1_B 471 DVVASKGSANQG 482 (500)
T ss_dssp ------------
T ss_pred HHHhcCccCCCC
Confidence 999998776543
No 23
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=1.5e-97 Score=805.00 Aligned_cols=467 Identities=24% Similarity=0.368 Sum_probs=432.2
Q ss_pred ccccchHHHHHHHHHHHHHHHHhhhccCCCCCceeeeCCCCCeEEecCHHHHhhhccccCh----HHHHHHHHHHhcccc
Q 008702 17 DTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHP----AAKILVDIAKSQDSE 92 (557)
Q Consensus 17 ~~~~~~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP----~a~ll~~~a~~~~~~ 92 (557)
+..+|.+++.+|+.||..|+++|++||||+||+|||+++.|+++|||||+|||++|+++|| +|+|++++|++|+++
T Consensus 4 ~~~~g~~ar~~~~~~~~~la~~vkttLGPkG~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e 83 (543)
T 1we3_A 4 ILVFDEAARRALERGVNAVANAVKVTLGPRGRNVVLEKKFGSPTITKDGVTVAKEVELEDHLENIGAQLLKEVASKTNDV 83 (543)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHcccCChHHhHHHHHHHHHHHhhhee
Confidence 4578999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHHHHHHhhccCccC
Q 008702 93 VGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIG 172 (557)
Q Consensus 93 ~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~~~~~l~~ia~tsl~sk~~~ 172 (557)
+||||||++||+++||+++.+++++|+||+.|++||++|++.+++.|++++++++. ++.|.++++++++
T Consensus 84 ~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~------~~~l~~vA~iS~~----- 152 (543)
T 1we3_A 84 AGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEKIKALAIPVED------RKAIEEVATISAN----- 152 (543)
T ss_dssp HSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCS------HHHHHHHHHHHHT-----
T ss_pred cCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCC------HHHHHHhhhhhcC-----
Confidence 99999999999999999999999999999999999999999999999999999862 5789999998853
Q ss_pred chhHHHHHHHHHHHHhhCCCCCCCCceeeeecCCCcccc-eEEEeEEEeccccCCCC----CCCCccccCceEEEeeccc
Q 008702 173 GEKEFFASMVVDAVGAIGDGDRLNMIGIKKVPGGTMRDS-FLVNGVAFKKTFSYAGF----EQQPKKFLNPKILLLNIEL 247 (557)
Q Consensus 173 ~~~~~ls~lv~~Ai~~v~~~~d~~~I~i~~i~gg~~~ds-~li~Givl~~~~~~~~~----~~~~~~~~n~kIll~~~~L 247 (557)
+++|++++++|+.+++++ +.|.|. +|++++|| ++++|++|+++|.|||| ++|+++++||+|+++|++|
T Consensus 153 --~~~i~~li~dAv~~V~~~---g~I~Ve--~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~I 225 (543)
T 1we3_A 153 --DPEVGKLIADAMEKVGKE---GIITVE--ESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKV 225 (543)
T ss_dssp --CHHHHHHHHHHHHTTCTT---SEEEEE--ECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEESSCB
T ss_pred --CHHHHHHHHHHHHHhCcC---CcEEEe--cCCccccceEEEcCEEEecCccccccccCcccCceeecCceEEEECCCc
Confidence 689999999999999865 445554 79999998 99999999999999998 3577889999999999975
Q ss_pred cccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhCC------ccc-----ccC
Q 008702 248 ELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRD------IFC-----AGR 316 (557)
Q Consensus 248 e~~~~~~~~~~~i~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~lii~~~~i~~~al~~l~~~~------I~~-----v~~ 316 (557)
+++++ +.++++++.+.|++|||++++|++.++++|.+++ |++ +++
T Consensus 226 -------------s~~~~-----------l~~~le~i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~ 281 (543)
T 1we3_A 226 -------------SNVRE-----------LLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGD 281 (543)
T ss_dssp -------------CCHHH-----------HHHHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHH
T ss_pred -------------CCHHH-----------HHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchhh
Confidence 45555 4678999999999999999999999999998754 444 558
Q ss_pred CChHHHHHHHHHhCCeeccc-----ccCCCCCCccccceEEEEEECCeeEEEEEcCCCC---------------------
Q 008702 317 VAEEDLLRVAAATGGTVQTS-----VNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSG--------------------- 370 (557)
Q Consensus 317 v~~~~le~Ia~~tGa~ii~s-----~~~l~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~--------------------- 370 (557)
+++++|+|||++|||+++++ +++++++++|+|+.|++ +++++++|+||.++
T Consensus 282 ~~~~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~a~~v~~---~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~ 358 (543)
T 1we3_A 282 RRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRI---TKDETTIVGGKGKKEDIEARINGIKKELETTDSEY 358 (543)
T ss_dssp HHHHHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEEEEEEEE---CSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHH
T ss_pred hhHHHHHHHHHHhCCceeeccccCCcccCCHHHCCCceEEEE---EcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchh
Confidence 99999999999999999996 89999999999999975 67999999999753
Q ss_pred --------------ceEEEEeecCCHHHHHHHHHHHHHHHHHHHHHhhCCceecCCchhHHHHHHHHHHHHhhhcchHHH
Q 008702 371 --------------RTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDMEISKYLRQESRAIAGKSQF 436 (557)
Q Consensus 371 --------------~~~TIll~G~t~~~l~e~k~~i~dal~~~~~~~~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~ 436 (557)
++|||+|||+|+.+++|.||+++|||+++|+++++| +|||||++|++++.+|++++.+.++++|+
T Consensus 359 ~~e~l~erlakl~~~~~tI~lrG~te~~l~E~~r~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~~~~g~~q~ 437 (543)
T 1we3_A 359 AREKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDALNATRAAVEEG-IVPGGGVTLLRAISAVEELIKKLEGDEAT 437 (543)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhccC-cCCCccHHHHHHHHHHHHHhhccCchHHH
Confidence 789999999999999999999999999999999999 99999999999999999998878899999
Q ss_pred HHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHccCCCCCCCCeEEecCCCcccccccCCcccchHHHHHHHHHHHHHH
Q 008702 437 FINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAA 516 (557)
Q Consensus 437 ~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~~~~~~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a 516 (557)
++++|++||+.||++|++|||+|+.+++.+|++.|. + .++|||..+|++.||++.|||||+.||+++|++|+|+|
T Consensus 438 ~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~----~-~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a 512 (543)
T 1we3_A 438 GAKIVRRALEEPARQIAENAGYEGSVIVQQILAETK----N-PRYGFNAATGEFVDMVEAGIVDPAKVTRSALQNAASIG 512 (543)
T ss_dssp HHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHCCS----C-TTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHhcC----C-CCEEEeCCCCeecccccCCcCccHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999873 3 78999999999999999999999999999999999999
Q ss_pred HHHhchhhhhcCCCCCcc
Q 008702 517 CLILSVDETVKNPKSESA 534 (557)
Q Consensus 517 ~~lL~id~iI~~~~~~~~ 534 (557)
++||+||++|...|.+.+
T Consensus 513 ~~iL~id~iI~~~~~~~~ 530 (543)
T 1we3_A 513 ALILTTEAVVAEKPEKKE 530 (543)
T ss_dssp HHHHTEEEEEEECSCC--
T ss_pred HHHHHHHHHhhcCCccCC
Confidence 999999999998876544
No 24
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=3.7e-98 Score=809.06 Aligned_cols=466 Identities=23% Similarity=0.350 Sum_probs=401.1
Q ss_pred ccccchHHHHHHHHHHHHHHHHhhhccCCCCCceeeeCCCCCeEEecCHHHHhhhccccCh----HHHHHHHHHHhcccc
Q 008702 17 DTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHP----AAKILVDIAKSQDSE 92 (557)
Q Consensus 17 ~~~~~~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP----~a~ll~~~a~~~~~~ 92 (557)
+..+|.+++.+|+.||..|+++|++||||+||+|||+++.|+++|||||+|||++|+++|| +|+|++++|++|+++
T Consensus 5 ~~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e 84 (545)
T 1iok_A 5 EVKFNSDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRTNDE 84 (545)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHGGGG
T ss_pred hhhccHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEECCCCCeEEeCCHHHHHHHhccCChhhHHHHHHHHHHHHhhccc
Confidence 4678999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHHHHHHhhccCccC
Q 008702 93 VGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIG 172 (557)
Q Consensus 93 ~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~~~~~l~~ia~tsl~sk~~~ 172 (557)
+||||||++||+++||+++.+++++|+||+.|++||++|++.+++.|++++++++. ++.|.+++++++
T Consensus 85 ~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~------~e~l~~va~iS~------ 152 (545)
T 1iok_A 85 AGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVND------SSEVAQVGTISA------ 152 (545)
T ss_dssp CSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCBCCCS------TTTTTHHHHHTT------
T ss_pred cCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCC------HHHHHHHHHhhc------
Confidence 99999999999999999999999999999999999999999999999999999863 357899999885
Q ss_pred chhHHHHHHHHHHHHhhCCCCCCCCceeeeecCCCcccc-eEEEeEEEeccccCCCC----CCCCccccCceEEEeeccc
Q 008702 173 GEKEFFASMVVDAVGAIGDGDRLNMIGIKKVPGGTMRDS-FLVNGVAFKKTFSYAGF----EQQPKKFLNPKILLLNIEL 247 (557)
Q Consensus 173 ~~~~~ls~lv~~Ai~~v~~~~d~~~I~i~~i~gg~~~ds-~li~Givl~~~~~~~~~----~~~~~~~~n~kIll~~~~L 247 (557)
+++++|++++++|+.+++++ +.|.|. +|++++|| ++++|++|+++|.|||| ++|+++++||+|+++|++|
T Consensus 153 ~~~~~i~~li~dAv~~V~~~---g~I~Ve--~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~I 227 (545)
T 1iok_A 153 NGESFIGQQIAEAMQRVGNE---GVITVE--ENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKL 227 (545)
T ss_dssp TTCHHHHHHHHHHHHHHCTT---SCCCCE--ECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSCB
T ss_pred CCchhHHHHHHHHHHHhccC---CeEEEE--eCCccccceEEEecEEEecCccccccccCcccCceeecCCeEEEEcCCc
Confidence 36899999999999999865 456665 89999998 99999999999999998 3577889999999999986
Q ss_pred cccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhCCc-----------ccccC
Q 008702 248 ELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDI-----------FCAGR 316 (557)
Q Consensus 248 e~~~~~~~~~~~i~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~lii~~~~i~~~al~~l~~~~I-----------~~v~~ 316 (557)
+ ++++ +.++++++.+.+++|||++++|++.++++|.+++| .++++
T Consensus 228 ~-------------~~~~-----------l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~ 283 (545)
T 1iok_A 228 S-------------SLQP-----------MVPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGD 283 (545)
T ss_dssp C-------------CCCC----------------------CCCCEEEESCBC-----------------CEEEECSCCTT
T ss_pred C-------------CHHH-----------HHHHHHHHHhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchhhh
Confidence 3 4444 45778999999999999999999999999998665 45669
Q ss_pred CChHHHHHHHHHhCCeeccc-----ccCCCCCCccccceEEEEEECCeeEEEEEcCCCC---------------------
Q 008702 317 VAEEDLLRVAAATGGTVQTS-----VNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSG--------------------- 370 (557)
Q Consensus 317 v~~~~le~Ia~~tGa~ii~s-----~~~l~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~--------------------- 370 (557)
+++++|+|||++|||+++++ +++++++++|+|+.|++ +++++++|+||+++
T Consensus 284 ~~~~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~a~~v~~---~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~ 360 (545)
T 1iok_A 284 RRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVSI---NKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDY 360 (545)
T ss_dssp HHHHHHHHHHHHHTC---------------CTTSEEEEEEEE---CSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSS
T ss_pred ccHHHHHHHHHhcCCeeecccccCCcccCCHHHcCcCcEEEE---ecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchh
Confidence 99999999999999999996 99999999999999985 57999999999754
Q ss_pred --------------ceEEEEeecCCHHHHHHHHHHHHHHHHHHHHHhhCCceecCCchhHHHHHHHHHHHHhhhcchHHH
Q 008702 371 --------------RTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDMEISKYLRQESRAIAGKSQF 436 (557)
Q Consensus 371 --------------~~~TIll~G~t~~~l~e~k~~i~dal~~~~~~~~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~ 436 (557)
++|||+|||+|+.+++|.||+++|||+++++++++| +|||||++|++++.+|++++. .++++|+
T Consensus 361 ~~ekl~erlakl~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~-~~g~~q~ 438 (545)
T 1iok_A 361 DREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEG-IVVGGGVALVQGAKVLEGLSG-ANSDQDA 438 (545)
T ss_dssp HHHHHHHHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHGGGGGSCCC-SSHHHHH
T ss_pred hHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhhcC-CCCCchHHHHHHHHHHHHHhc-cCchHHH
Confidence 789999999999999999999999999999999999 999999999999999998776 7889999
Q ss_pred HHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHccCCCCCCCCeEEecCCCcccccccCCcccchHHHHHHHHHHHHHH
Q 008702 437 FINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAA 516 (557)
Q Consensus 437 ~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~~~~~~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a 516 (557)
++++|++||+.||++|++|||+|+.+++.+|++.| . .++|||..+|++.||++.|||||+.||+++|++|+|+|
T Consensus 439 ~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~-~-----~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~A 512 (545)
T 1iok_A 439 GIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESS-D-----KAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVA 512 (545)
T ss_dssp HHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHSCC-S-----TTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhc-C-----CCeeEeCCCCcccchHhcCcEEccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999765 2 67999999999999999999999999999999999999
Q ss_pred HHHhchhhhhcCCCCCcc
Q 008702 517 CLILSVDETVKNPKSESA 534 (557)
Q Consensus 517 ~~lL~id~iI~~~~~~~~ 534 (557)
++||+||++|...|.+.+
T Consensus 513 ~~iL~id~iI~~~~~~~~ 530 (545)
T 1iok_A 513 GLLITTEAMIAEKPEPKA 530 (545)
T ss_dssp HHHHTEEEEEEECC----
T ss_pred HHHHhHHHhhccCCccCC
Confidence 999999999998876543
No 25
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=5.3e-97 Score=799.39 Aligned_cols=464 Identities=22% Similarity=0.348 Sum_probs=429.9
Q ss_pred ccccchHHHHHHHHHHHHHHHHhhhccCCCCCceeeeCCCCCeEEecCHHHHhhhccccCh----HHHHHHHHHHhcccc
Q 008702 17 DTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHP----AAKILVDIAKSQDSE 92 (557)
Q Consensus 17 ~~~~~~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP----~a~ll~~~a~~~~~~ 92 (557)
+..+|.+++.+|+.||..|+++|++||||+||+|||+++.|+++|||||+||+++|+++|| +|+|++++|++|+++
T Consensus 4 ~~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~G~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e 83 (547)
T 1kp8_A 4 DVKFGNDAGVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDA 83 (547)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHccccChhhhHHHHHHHHHHHhhccc
Confidence 4578999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHHHHHHhhccCccC
Q 008702 93 VGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIG 172 (557)
Q Consensus 93 ~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~~~~~l~~ia~tsl~sk~~~ 172 (557)
+||||||++||+++||+++.+++++|+||+.|++||++|++.+++.|+++++|++. ++.|.+++++++
T Consensus 84 ~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~------~e~l~~vA~iS~------ 151 (547)
T 1kp8_A 84 AGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVPCSD------SKAIAQVGTISA------ 151 (547)
T ss_dssp HSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCBCCCS------HHHHHHHHHHHT------
T ss_pred cCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCCCC------HHHHHHHHHHhc------
Confidence 99999999999999999999999999999999999999999999999999999862 578999999985
Q ss_pred chhHHHHHHHHHHHHhhCCCCCCCCceeeeecCCCcccc-eEEEeEEEeccccCCCC----CCCCccccCceEEEeeccc
Q 008702 173 GEKEFFASMVVDAVGAIGDGDRLNMIGIKKVPGGTMRDS-FLVNGVAFKKTFSYAGF----EQQPKKFLNPKILLLNIEL 247 (557)
Q Consensus 173 ~~~~~ls~lv~~Ai~~v~~~~d~~~I~i~~i~gg~~~ds-~li~Givl~~~~~~~~~----~~~~~~~~n~kIll~~~~L 247 (557)
+++++|++++++|+.+++++ +.|.|. +|++++|| ++++|++|+++|.|||| ++|+++++||+|+++|++|
T Consensus 152 ~~~~~i~~liadAv~~V~~d---g~I~Ve--~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~~I 226 (547)
T 1kp8_A 152 NSDETVGKLIAEAMDKVGKE---GVITVE--DGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKI 226 (547)
T ss_dssp TSCHHHHHHHHHHHHHHCTT---SEEEEE--CCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECEESEE
T ss_pred cchhHHHHHHHHHHHHhCcC---CcEEEE--eCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEEcCcC
Confidence 36899999999999999865 445554 89999998 99999999999999998 3577889999999999975
Q ss_pred cccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhCCc-----------ccccC
Q 008702 248 ELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDI-----------FCAGR 316 (557)
Q Consensus 248 e~~~~~~~~~~~i~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~lii~~~~i~~~al~~l~~~~I-----------~~v~~ 316 (557)
+++++ +.++++++.+.+++|||++++|++.++++|.+++| .++++
T Consensus 227 -------------s~~~~-----------l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~ 282 (547)
T 1kp8_A 227 -------------SNIRE-----------MLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGD 282 (547)
T ss_dssp -------------CCGGG-----------THHHHHHHHGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHH
T ss_pred -------------CCHHH-----------HHHHHHHHHhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEecccccc
Confidence 45555 45789999999999999999999999999998654 44569
Q ss_pred CChHHHHHHHHHhCCeeccc-----ccCCCCCCccccceEEEEEECCeeEEEEEcCCCC---------------------
Q 008702 317 VAEEDLLRVAAATGGTVQTS-----VNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSG--------------------- 370 (557)
Q Consensus 317 v~~~~le~Ia~~tGa~ii~s-----~~~l~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~--------------------- 370 (557)
+++++|+|||++|||+++++ ++++++++||+|+.|++ .++++++|+||.++
T Consensus 283 ~rk~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~a~~v~~---~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~ 359 (547)
T 1kp8_A 283 RRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVI---NKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDY 359 (547)
T ss_dssp HHHHHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEEEEEEEE---CSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHH
T ss_pred ccHHHHHHHHHHhCCeEecccccCCcccCCHHHCCceeEEEE---ccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchh
Confidence 99999999999999999996 99999999999999975 67999999999764
Q ss_pred --------------ceEEEEeecCCHHHHHHHHHHHHHHHHHHHHHhhCCceecCCchhHHHHHHHHHHHHhhhcchHHH
Q 008702 371 --------------RTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDMEISKYLRQESRAIAGKSQF 436 (557)
Q Consensus 371 --------------~~~TIll~G~t~~~l~e~k~~i~dal~~~~~~~~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~ 436 (557)
++|||+|||+|+.+++|.||+++|||+++|+++++| +|||||++|++++.+|++++. .++++|+
T Consensus 360 ~~ekl~erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~-~~g~~q~ 437 (547)
T 1kp8_A 360 DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEG-VVAGGGVALIRVASKLADLRG-QNADQNV 437 (547)
T ss_dssp HHHHHHHHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHHHHTTTCCC-SSHHHHH
T ss_pred hHHHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHHHHHHHhccCC-EEeCCcHHHHHHHHHHHHHhc-cCchHHH
Confidence 689999999999999999999999999999999999 999999999999999998766 7889999
Q ss_pred HHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHccCCCCCCCCeEEecCCCcccccccCCcccchHHHHHHHHHHHHHH
Q 008702 437 FINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAA 516 (557)
Q Consensus 437 ~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~~~~~~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a 516 (557)
++++|++||+.||++|++|||+|+.+++.+|++. + .++|||..+|++.||++.|||||+.||+++|++|+|+|
T Consensus 438 ~i~~~a~ALe~ip~~la~NaG~d~~~vv~~l~~~------~-~~~G~d~~~g~~~dm~~~gI~Dp~~vk~~al~~A~~~A 510 (547)
T 1kp8_A 438 GIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGG------D-GNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAASVA 510 (547)
T ss_dssp HHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHS------C-TTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhc------C-CCEeEeCCCCccccchhcCceechHhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999863 2 67999999999999999999999999999999999999
Q ss_pred HHHhchhhhhcCCCCCc
Q 008702 517 CLILSVDETVKNPKSES 533 (557)
Q Consensus 517 ~~lL~id~iI~~~~~~~ 533 (557)
++||+||++|...|.++
T Consensus 511 ~~iL~id~iI~~~~~~~ 527 (547)
T 1kp8_A 511 GLMITTECMVTDLPKND 527 (547)
T ss_dssp HHHHTEEEEEEECCC--
T ss_pred HHHHhHhheeecCCccC
Confidence 99999999999887755
No 26
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=5.1e-97 Score=797.23 Aligned_cols=475 Identities=24% Similarity=0.332 Sum_probs=353.5
Q ss_pred ccccchHHHHHHHHHHHHHHHHhhhccCCCCCceeeeCCCCCeEEecCHHHHhhhccccChH----HHHHHHHHHhcccc
Q 008702 17 DTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPA----AKILVDIAKSQDSE 92 (557)
Q Consensus 17 ~~~~~~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~----a~ll~~~a~~~~~~ 92 (557)
+..+|.+++.+|+.||.+|+++|++||||+||+|||+++.|+|+|||||+|||++|+++||+ |+|++++|++|+++
T Consensus 4 ~~~~~~~ar~~~~~~~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hp~~n~gAkll~e~a~~qd~e 83 (546)
T 3rtk_A 4 TIAYDEEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDV 83 (546)
T ss_dssp ---------------------------------------------------------CCCHHHHHHHHHHHHHHTSCC--
T ss_pred eeeccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECcHHHHHHHccCCChhhhHHHHHHHHHHHhhhhh
Confidence 45789999999999999999999999999999999999999999999999999999999998 99999999999999
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHHHHHHhhccCccC
Q 008702 93 VGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIG 172 (557)
Q Consensus 93 ~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~~~~~l~~ia~tsl~sk~~~ 172 (557)
+||||||++|||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ + ++.|.++|+++++
T Consensus 84 ~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~~s~~v~--~----~e~L~~vA~iS~~----- 152 (546)
T 3rtk_A 84 AGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKGAKEVE--T----KEQIAATAAISAG----- 152 (546)
T ss_dssp -----CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCC--S----HHHHHHHHHHHHT-----
T ss_pred hCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCC--C----hHHHHhHeEEeCC-----
Confidence 9999999999999999999999999999999999999999999999999999886 2 5789999998863
Q ss_pred chhHHHHHHHHHHHHhhCCCCCCCCceeeeecCCCcccceEEEeEEEeccccCCCCC----CCCccccCceEEEeecccc
Q 008702 173 GEKEFFASMVVDAVGAIGDGDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFE----QQPKKFLNPKILLLNIELE 248 (557)
Q Consensus 173 ~~~~~ls~lv~~Ai~~v~~~~d~~~I~i~~i~gg~~~ds~li~Givl~~~~~~~~~~----~~~~~~~n~kIll~~~~Le 248 (557)
++++++++++|+.+++++ +.|.|.+.. +...||++++|++|+++|.||||. +|+++++||+|+++|++|
T Consensus 153 --~~~i~~liadAv~~V~~d---gvI~Ve~~~-~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d~kI- 225 (546)
T 3rtk_A 153 --DQSIGDLIAEAMDKVGNE---GVITVEESN-TFGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVSSKV- 225 (546)
T ss_dssp --CHHHHHHHHHHHHHSCTT---SEEEEECCS-SSSCEEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBSSEE-
T ss_pred --chHHHHHHHHHHHHhccC---CceEEEecC-CcccceEEeeeEEEcCCccCcccccCcccCeeEecccEEEEECCcc-
Confidence 678999999999999875 445555422 344689999999999999999983 688999999999999874
Q ss_pred ccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhCC------ccc-----ccCC
Q 008702 249 LKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRD------IFC-----AGRV 317 (557)
Q Consensus 249 ~~~~~~~~~~~i~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~lii~~~~i~~~al~~l~~~~------I~~-----v~~v 317 (557)
+++++ +.++++++.+.|++|||++++|++.++++|..++ +.+ |++.
T Consensus 226 ------------s~~~~-----------l~~~le~I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~ 282 (546)
T 3rtk_A 226 ------------STVKD-----------LLPLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDR 282 (546)
T ss_dssp ------------CCSTT-----------THHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHH
T ss_pred ------------CCHHH-----------HHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEecccccccc
Confidence 45555 4577999999999999999999999999998543 333 3455
Q ss_pred ChHHHHHHHHHhCCeecc-----cccCCCCCCccccceEEEEEECCeeEEEEEcCCCCc---------------------
Q 008702 318 AEEDLLRVAAATGGTVQT-----SVNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSGR--------------------- 371 (557)
Q Consensus 318 ~~~~le~Ia~~tGa~ii~-----s~~~l~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~~--------------------- 371 (557)
++++|+|||++|||++++ +++++++++||+|+.|+ ++++++++|+||.+++
T Consensus 283 rk~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~---i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~ 359 (546)
T 3rtk_A 283 RKAMLQDMAILTGGQVISEEVGLTLENADLSLLGKARKVV---VTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYD 359 (546)
T ss_dssp HHHHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEEEEEEE---ECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHH
T ss_pred chhhHHHHHHHhCCEEeeccccCccccCCHhhCCeeEEEE---EcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhh
Confidence 689999999999999999 68999999999999997 5889999999997643
Q ss_pred --------------eEEEEeecCCHHHHHHHHHHHHHHHHHHHHHhhCCceecCCchhHHHHHHHHHHHHhhhcchHHHH
Q 008702 372 --------------TATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFF 437 (557)
Q Consensus 372 --------------~~TIll~G~t~~~l~e~k~~i~dal~~~~~~~~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~ 437 (557)
+|||+|||+|+.+++|.||+++|||+++|+++++| +|||||++|++++.+|++++ .++++|++
T Consensus 360 ~ekl~erlakl~g~~atI~vrG~te~~l~E~er~l~DAl~a~r~av~~g-iVpGGGa~e~~~s~~L~~~~--~~g~eq~~ 436 (546)
T 3rtk_A 360 REKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEG-IVAGGGVTLLQAAPTLDELK--LEGDEATG 436 (546)
T ss_dssp HHHHHHHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHTTGGGSTTSC--CCTTHHHH
T ss_pred HHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHhCC-cccCCcHHHHHHHHHHHHhc--cccHHHHH
Confidence 89999999999999999999999999999999999 99999999999999999876 78999999
Q ss_pred HHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHccCCCCCCCCeEEecCCCcccccccCCcccchHHHHHHHHHHHHHHH
Q 008702 438 INSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAAC 517 (557)
Q Consensus 438 ~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~~~~~~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~ 517 (557)
+++|++||+.||++|++|||+|+.+++.+|++. . ..+|||..+|++.||++.|||||+.||+++|++|+|+|+
T Consensus 437 i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~--~-----~~~G~d~~~g~~~Dm~~~gI~dp~~vk~~al~~A~e~A~ 509 (546)
T 3rtk_A 437 ANIVKVALEAPLKQIAFNSGLEPGVVAEKVRNL--P-----AGHGLNAQTGVYEDLLAAGVADPVKVTRSALQNAASIAG 509 (546)
T ss_dssp HHHHHHHTTHHHHHHHTTTTCCHHHHHHHHHHS--C-----TTEECCSSSCCCEETTTTTCEEEHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhh--c-----CCEeEcCCCCcEeeHHHcCCEecHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999874 2 448999999999999999999999999999999999999
Q ss_pred HHhchhhhhcCCCCCcccccccccCCCCC
Q 008702 518 LILSVDETVKNPKSESAQGEAAASAMGGR 546 (557)
Q Consensus 518 ~lL~id~iI~~~~~~~~~~~~~~~~~~~~ 546 (557)
+||+||++|...|.+++.++. |+.|+|+
T Consensus 510 ~iL~id~iI~~~~~~~~~~~~-~~~~~~~ 537 (546)
T 3rtk_A 510 LFLTTEAVVADKPEKEKASVP-GGGDMGG 537 (546)
T ss_dssp HHHHCC-----------------------
T ss_pred HHHHHHHHHhcCCCCCCCCCC-CCCCcCc
Confidence 999999999998877653322 4555554
No 27
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=100.00 E-value=3.4e-37 Score=286.60 Aligned_cols=173 Identities=26% Similarity=0.467 Sum_probs=150.2
Q ss_pred cccceEEEeEEEeccccCCCCCCCCccccCceEEEeeccccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHHc
Q 008702 208 MRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQS 287 (557)
Q Consensus 208 ~~ds~li~Givl~~~~~~~~~~~~~~~~~n~kIll~~~~Le~~~~~~~~~~~i~~~~~~~~~~~~E~~~i~~~v~~i~~~ 287 (557)
++||++++|++|++++.+++ ||++++||||++++++|++++++.++++.++++++++++.+.|+++++.++++|++.
T Consensus 1 ~~dS~lv~Gvvl~k~~~~~~---mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~ 77 (178)
T 1gml_A 1 MEDSCVLRGVMINKDVTHPR---MRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQL 77 (178)
T ss_dssp --CCSEEEEEEESCCCSSTT---SCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCcEEEEEEEEeccccCCC---CCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 36899999999999999875 589999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEecCcccHHHHHHHHhCCcccccCCChHHHHHHHHHhCCeecccccCCCCCCccc-cceEEEEEECCeeEEEEEc
Q 008702 288 GAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGT-CEHFEERQVGNERFNIFSG 366 (557)
Q Consensus 288 ~~~lii~~~~i~~~al~~l~~~~I~~v~~v~~~~le~Ia~~tGa~ii~s~~~l~~~~lG~-~~~v~~~~ig~~~~~~~~g 366 (557)
|+||||++++|+|.+++||+++||++++++++++|+|||++|||++++++++++++.+|+ |+.|++.++|+++|++|+|
T Consensus 78 g~nVVl~~k~I~d~a~~~l~k~gI~~vr~v~~~dleria~atGa~iv~~~~~l~~~~LG~~~~~v~~~~ig~~~~~~~~g 157 (178)
T 1gml_A 78 KPDVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITD 157 (178)
T ss_dssp CCSEEEESSCBCHHHHHHHHHTTCEEECCCCHHHHHHHHHHHCCCEESCGGGCCGGGSBCCEEEEEEEEETTEEEEEEEE
T ss_pred CCcEEEECCcccHHHHHHHHHCCCEEEecCCHHHHHHHHHHhCCeEeCChhhCChhhhCCcccEEEEEEECCeEEEEEEC
Confidence 999999999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred CCCCceEEEEeecCCHH
Q 008702 367 CPSGRTATIVLRGGADQ 383 (557)
Q Consensus 367 ~~~~~~~TIll~G~t~~ 383 (557)
|++++.|||+|||++..
T Consensus 158 c~~~~~~TIllRG~~~~ 174 (178)
T 1gml_A 158 CKDPKACTILLRGASHH 174 (178)
T ss_dssp ESSTTSCEEEEEC----
T ss_pred CCCCCEEEEEEECCCcc
Confidence 99999999999999865
No 28
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.98 E-value=2.6e-32 Score=248.58 Aligned_cols=154 Identities=32% Similarity=0.566 Sum_probs=148.3
Q ss_pred EEeEEEeccccCCCCCCCCccccCceEEEeeccccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEE
Q 008702 214 VNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVL 293 (557)
Q Consensus 214 i~Givl~~~~~~~~~~~~~~~~~n~kIll~~~~Le~~~~~~~~~~~i~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~lii 293 (557)
++|++|++++.+++ ||++++||||++++++|++++++.++++.++++++++++.+.|+++++.++++|++.|+||||
T Consensus 1 i~Gvv~~k~~~~~~---mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVVl 77 (159)
T 1ass_A 1 MSGIVIDKEKVHSK---MPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVL 77 (159)
T ss_dssp CCCEEESCCCSCTT---SCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred CceEEEecccCCCC---CCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCCeEEE
Confidence 47999999999875 589999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCcccHHHHHHHHhCCcccccCCChHHHHHHHHHhCCeecccccCCCCCCccccceEEEEEECCeeEEEEEcCCCC
Q 008702 294 SRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSG 370 (557)
Q Consensus 294 ~~~~i~~~al~~l~~~~I~~v~~v~~~~le~Ia~~tGa~ii~s~~~l~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~ 370 (557)
++++|+|.+++||+++||++++++++++|+|||++|||++++++++++++.+|+|+.|++.++|+++|++|+||++.
T Consensus 78 ~~k~I~d~a~~~l~k~gI~~v~~v~~~dleria~atGa~iv~~~~~l~~~~LG~~~~v~e~~ig~~~~~~~~g~~~~ 154 (159)
T 1ass_A 78 CQKGIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNH 154 (159)
T ss_dssp ESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHTCCCBSSTTSCCTTSCEEEEEEEEEEETTEEEEEEESCC--
T ss_pred ECCccCHHHHHHHHHCCCEEEccCCHHHHHHHHHHhCCeeeCccccCCcccCccceEEEEEEECCeEEEEEECCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999764
No 29
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=99.47 E-value=2.4e-13 Score=123.61 Aligned_cols=147 Identities=22% Similarity=0.309 Sum_probs=112.9
Q ss_pred ceEEEeEEEeccccCCCCC----CCCccccCceEEEeeccccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHH
Q 008702 211 SFLVNGVAFKKTFSYAGFE----QQPKKFLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQ 286 (557)
Q Consensus 211 s~li~Givl~~~~~~~~~~----~~~~~~~n~kIll~~~~Le~~~~~~~~~~~i~~~~~~~~~~~~E~~~i~~~v~~i~~ 286 (557)
.++++||.||+||.||||. +|..+++||+||+++.+| ++.++ +.+.++++.+
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKI-------------s~i~~-----------ilP~LE~~~~ 57 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKI-------------SSLPD-----------LLPLLEKVAG 57 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEE-------------CCHHH-----------HHHHHHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCcc-------------CCHHH-----------HHHHHHHHHH
Confidence 3578999999999999994 577889999999999875 66666 6788999999
Q ss_pred cCCeEEEecCcccHHHHHHHH--h-CC---ccc-----ccCCChHHHHHHHHHhCCeeccc-----ccCCCCCCccccce
Q 008702 287 SGAKVVLSRLAIGDLATQYFA--D-RD---IFC-----AGRVAEEDLLRVAAATGGTVQTS-----VNNVVDEVLGTCEH 350 (557)
Q Consensus 287 ~~~~lii~~~~i~~~al~~l~--~-~~---I~~-----v~~v~~~~le~Ia~~tGa~ii~s-----~~~l~~~~lG~~~~ 350 (557)
.+.+|+|.+.+|+..++..|. + +| +.+ |+..++..|++||.+||+++++. +++++..+||+|++
T Consensus 58 ~~kpLlIIAedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~ 137 (194)
T 3m6c_A 58 TGKPLLIVAEDVEGEALATLVVNAIRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARR 137 (194)
T ss_dssp HTCCEEEEESEECHHHHHHHHHHHHHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEE
T ss_pred hCCCeEEEecccccchhhhhhhhhccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccE
Confidence 999999999999998887654 2 33 222 56677999999999999999974 67888889999998
Q ss_pred EEEEEECCeeEEEEEcCCCCceEEEEeec-CCHHHHHHHHHHHHHHHH
Q 008702 351 FEERQVGNERFNIFSGCPSGRTATIVLRG-GADQFIEEAERSLHDAIM 397 (557)
Q Consensus 351 v~~~~ig~~~~~~~~g~~~~~~~TIll~G-~t~~~l~e~k~~i~dal~ 397 (557)
+.. ..+. |.++.| .+...++++-..|+..+.
T Consensus 138 v~v---tkd~-------------T~iv~G~g~~~~I~~Rv~qIr~~ie 169 (194)
T 3m6c_A 138 VVV---SKDD-------------TVIVDGGGTAEAVANRAKHLRAEID 169 (194)
T ss_dssp EEE---CSSC-------------EEEEEECCCHHHHHHHHHHHHHHHH
T ss_pred EEE---cCCc-------------eEEecCCCCHHHHHHHHHHHHHHHH
Confidence 874 3322 344433 455666655555555443
No 30
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=99.47 E-value=1.9e-13 Score=118.58 Aligned_cols=124 Identities=23% Similarity=0.352 Sum_probs=101.5
Q ss_pred eEEEeccccCCCC----CCCCccccCceEEEeeccccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeE
Q 008702 216 GVAFKKTFSYAGF----EQQPKKFLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKV 291 (557)
Q Consensus 216 Givl~~~~~~~~~----~~~~~~~~n~kIll~~~~Le~~~~~~~~~~~i~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~l 291 (557)
|+.||++|.|||| ++|...++||+||+++.+| ++.++ +.+.++++.+.+.+|
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKI-------------s~i~~-----------llP~LE~v~~~~~pL 56 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKV-------------SNVRE-----------LLPILEQVAQTGKPL 56 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEE-------------CCHHH-----------HHHHHHHHHTTTCCE
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecccc-------------cCHHH-----------HHHHHHHHHHHCCCE
Confidence 8999999999999 4677889999999999875 67766 688899999999999
Q ss_pred EEecCcccHHHHHHHH--h-CCcc--------cccCCChHHHHHHHHHhCCeeccc-----ccCCCCCCccccceEEEEE
Q 008702 292 VLSRLAIGDLATQYFA--D-RDIF--------CAGRVAEEDLLRVAAATGGTVQTS-----VNNVVDEVLGTCEHFEERQ 355 (557)
Q Consensus 292 ii~~~~i~~~al~~l~--~-~~I~--------~v~~v~~~~le~Ia~~tGa~ii~s-----~~~l~~~~lG~~~~v~~~~ 355 (557)
+|.+.+|+..++..|. + +|.+ .|+..++..|++||.+||+++++. +++.+.++||+|+++.
T Consensus 57 lIIAedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~--- 133 (145)
T 1srv_A 57 LIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVR--- 133 (145)
T ss_dssp EEEESEECHHHHHHHHHHHHTTSCCEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEE---
T ss_pred EEEecccchhhhhhhhhhhhcccceEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEE---
Confidence 9999999998888664 2 4433 256778999999999999999974 6677888999999887
Q ss_pred ECCeeEEEEEc
Q 008702 356 VGNERFNIFSG 366 (557)
Q Consensus 356 ig~~~~~~~~g 366 (557)
+..++.+.+.|
T Consensus 134 vtkd~TtIv~G 144 (145)
T 1srv_A 134 ITKDETTIVGG 144 (145)
T ss_dssp ECSSCEEEEEE
T ss_pred EcCCCeEEeCC
Confidence 45555555543
No 31
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=99.42 E-value=1.1e-12 Score=119.49 Aligned_cols=143 Identities=20% Similarity=0.304 Sum_probs=110.0
Q ss_pred EeEEEeccccCCCCC----CCCccccCceEEEeeccccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCe
Q 008702 215 NGVAFKKTFSYAGFE----QQPKKFLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAK 290 (557)
Q Consensus 215 ~Givl~~~~~~~~~~----~~~~~~~n~kIll~~~~Le~~~~~~~~~~~i~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~ 290 (557)
+|+.||++|.+|||. +|..+++||+||+++.+| ++.++ +.+.++++.+.+.+
T Consensus 13 ~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKI-------------s~i~~-----------ilP~LE~v~~~~rp 68 (201)
T 3osx_A 13 EGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKI-------------SNIRE-----------LLPVLEGVAKASKP 68 (201)
T ss_dssp CCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEE-------------CCHHH-----------HHHHHHHHHTSSCC
T ss_pred cccEecCccCChheeecccCCEEEecCCeEEEEcCcc-------------CCHHH-----------HHHHHHHHHHhCCC
Confidence 599999999999994 577789999999999875 66666 68889999999999
Q ss_pred EEEecCcccHHHHHHHH--h-CC---ccc-----ccCCChHHHHHHHHHhCCeeccc-----ccCCCCCCccccceEEEE
Q 008702 291 VVLSRLAIGDLATQYFA--D-RD---IFC-----AGRVAEEDLLRVAAATGGTVQTS-----VNNVVDEVLGTCEHFEER 354 (557)
Q Consensus 291 lii~~~~i~~~al~~l~--~-~~---I~~-----v~~v~~~~le~Ia~~tGa~ii~s-----~~~l~~~~lG~~~~v~~~ 354 (557)
|+|.+.+|+..++..|. + +| +.+ |+..++..|++||.+||+++++. +++++..+||+|+++.+
T Consensus 69 LlIIAEDvegEALatLvvNklrg~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~v- 147 (201)
T 3osx_A 69 LVIIAEDVEGEALATLVVNNMRGIVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVI- 147 (201)
T ss_dssp EEEEEEEECHHHHHHHHHHHHHTSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEE-
T ss_pred eEEEeccccchhhhHHHHhhccceEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEE-
Confidence 99999999998887654 2 33 322 56667899999999999999974 67788889999998874
Q ss_pred EECCeeEEEEEcCCCCceEEEEeec-CCHHHHHHHHHHHHHHHH
Q 008702 355 QVGNERFNIFSGCPSGRTATIVLRG-GADQFIEEAERSLHDAIM 397 (557)
Q Consensus 355 ~ig~~~~~~~~g~~~~~~~TIll~G-~t~~~l~e~k~~i~dal~ 397 (557)
..+. |+++.| .+...++++-..|+..+.
T Consensus 148 --tkd~-------------TtIv~G~G~~~~I~~Rv~qIr~qie 176 (201)
T 3osx_A 148 --NKDT-------------TTIIDGVGEEGAIAARVTQIRQQIE 176 (201)
T ss_dssp --CSSC-------------EEEEEECCCHHHHHHHHHHHHHHHH
T ss_pred --cCCc-------------eEEecCCCCHHHHHHHHHHHHHHHH
Confidence 3322 444433 455666665555555443
No 32
>1o13_A Probable NIFB protein; ribonuclease H-like motif fold, structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.83A {Thermotoga maritima} SCOP: c.55.5.1 PDB: 1t3v_A
Probab=45.65 E-value=38 Score=28.71 Aligned_cols=52 Identities=19% Similarity=0.150 Sum_probs=38.5
Q ss_pred HHHHHHHcCCeEEEecCcccHHHHHHHHhCCcccccCCChHHHHHHHHHhCCe
Q 008702 280 KLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGT 332 (557)
Q Consensus 280 ~v~~i~~~~~~lii~~~~i~~~al~~l~~~~I~~v~~v~~~~le~Ia~~tGa~ 332 (557)
..+.|.+.++++||+. +|++-+...|.++||-++......--+.|.....++
T Consensus 68 ~a~~L~~~gv~vVI~g-~IG~~a~~~L~~~GI~v~~~~~g~i~eal~~~~~G~ 119 (136)
T 1o13_A 68 VPNFVKEKGAELVIVR-GIGRRAIAAFEAMGVKVIKGASGTVEEVVNQYLSGQ 119 (136)
T ss_dssp HHHHHHHTTCSEEECS-CCCHHHHHHHHHTTCEEECSCCSBHHHHHHHHHTTC
T ss_pred HHHHHHHCCCCEEEEC-CCCHHHHHHHHHCCCEEEecCCCCHHHHHHHHHhCC
Confidence 4566677899999998 689999999999999998765544334455554443
No 33
>2yx6_A Hypothetical protein PH0822; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=44.10 E-value=41 Score=27.59 Aligned_cols=53 Identities=30% Similarity=0.304 Sum_probs=38.5
Q ss_pred HHHHHHHHcCCeEEEecCcccHHHHHHHHhCCcccccCCChHHHHHHHHHhCCe
Q 008702 279 DKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGT 332 (557)
Q Consensus 279 ~~v~~i~~~~~~lii~~~~i~~~al~~l~~~~I~~v~~v~~~~le~Ia~~tGa~ 332 (557)
...+.|.+.++++||+. ++++-+...|.++||-++......--+-|.....+.
T Consensus 54 ~~~~~L~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~v~eal~~~~~g~ 106 (121)
T 2yx6_A 54 DLPNFIKDHGAKIVLTY-GIGRRAIEYFNSLGISVVTGVYGRISDVIKAFIGGK 106 (121)
T ss_dssp HHHHHHHHTTCCEEECS-BCCHHHHHHHHHTTCEEECSBCSBHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEEC-CCCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHcCC
Confidence 44566677899999998 589999999999999988765443334455444443
No 34
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=41.37 E-value=55 Score=26.91 Aligned_cols=52 Identities=15% Similarity=0.097 Sum_probs=37.9
Q ss_pred HHHHHHHcCCeEEEecCcccHHHHHHHHhCCcccccCCChHHHHHHHHHhCCe
Q 008702 280 KLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGT 332 (557)
Q Consensus 280 ~v~~i~~~~~~lii~~~~i~~~al~~l~~~~I~~v~~v~~~~le~Ia~~tGa~ 332 (557)
..+.|...++++||+. +|++-+...|.++||-++......--+-|.....+.
T Consensus 57 ~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~ 108 (124)
T 1eo1_A 57 TAQIIANNGVKAVIAS-SPGPNAFEVLNELGIKIYRATGTSVEENLKLFTEGN 108 (124)
T ss_dssp HHHHHHHTTCCEEEEC-CSSHHHHHHHHHHTCEEEECCSCCHHHHHHHHHTTC
T ss_pred HHHHHHHCCCCEEEEC-CcCHHHHHHHHHCCCEEEEcCCCCHHHHHHHHHhCC
Confidence 3556667899999998 489999999999999988755543334455544443
No 35
>2wfb_A Putative uncharacterized protein ORP; mixed molybdenum-copper sulphide cluster, alpha and beta protein, biosynthetic protein; 2.00A {Desulfovibrio gigas}
Probab=40.02 E-value=50 Score=27.02 Aligned_cols=51 Identities=22% Similarity=0.153 Sum_probs=37.0
Q ss_pred HHHHHHHcCCeEEEecCcccHHHHHHHHhCCcccccCCCh-HHHHHHHHHhCC
Q 008702 280 KLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAE-EDLLRVAAATGG 331 (557)
Q Consensus 280 ~v~~i~~~~~~lii~~~~i~~~al~~l~~~~I~~v~~v~~-~~le~Ia~~tGa 331 (557)
..+.|.+.++++|||. ++++-+...|.++||-++..... .--+-|.....+
T Consensus 59 ~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~g~~i~eal~~~~~g 110 (120)
T 2wfb_A 59 AAQVLAKSGAGVLLTG-YVGPKAFQALQAAGIKVGQDLEGLTVRQAVQRFLDG 110 (120)
T ss_dssp HHHHHHHHTEEEEECS-CCCHHHHHHHHHTTCEEECCCTTSBHHHHHHHHHTT
T ss_pred HHHHHHHCCCCEEEEC-CCCHhHHHHHHHCCCEEEEcCCCCcHHHHHHHHHcC
Confidence 4566667899999998 58999999999999998876544 333334444433
No 36
>2re2_A Uncharacterized protein TA1041; dinitrogenase iron-molybdenum cofactor, structural genomics, center for structural genomics; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728}
Probab=27.67 E-value=91 Score=26.24 Aligned_cols=51 Identities=12% Similarity=0.063 Sum_probs=36.0
Q ss_pred HHHHHHHHcCCeEEEecCcccHHHHHHHHhCCcccccCCChHHHHHHHHHhCC
Q 008702 279 DKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGG 331 (557)
Q Consensus 279 ~~v~~i~~~~~~lii~~~~i~~~al~~l~~~~I~~v~~v~~~~le~Ia~~tGa 331 (557)
...+.|.+.++++||+. ++++-+...|.+ ||-++......--+.|.....+
T Consensus 70 ~~~~~L~~~gv~~VI~g-~iG~~a~~~L~~-GI~v~~~~~~~veeal~~~~~G 120 (136)
T 2re2_A 70 FMLKSALDHGANALVLS-EIGSPGFNFIKN-KMDVYIVPEMPVADALKLILEG 120 (136)
T ss_dssp HHHHHHHHTTCSEEEES-CCBHHHHHHHTT-TSEEEECCSCBHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCEEEEC-CCCHhHHHHHHC-CCEEEEcCCCCHHHHHHHHHhC
Confidence 34556667899999998 589999999999 9998876542333334444443
No 37
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=25.80 E-value=54 Score=26.57 Aligned_cols=52 Identities=12% Similarity=0.103 Sum_probs=37.4
Q ss_pred HHHHHHHcCCeEEEecCcccHHHHHHHHhCCcccccCCChHHHHHHHHHhCCe
Q 008702 280 KLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGT 332 (557)
Q Consensus 280 ~v~~i~~~~~~lii~~~~i~~~al~~l~~~~I~~v~~v~~~~le~Ia~~tGa~ 332 (557)
..+.+...++++||+. ++++-+...|.++||-++......--+-|.....+.
T Consensus 54 ~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~ 105 (116)
T 1rdu_A 54 VVQSLVSKGVEYLIAS-NVGRNAFETLKAAGVKVYRFEGGTVQEAIDAFSEGR 105 (116)
T ss_dssp HHHHHHTTTCCEEECS-SCCSSCHHHHHTTTCEEECCCSCBHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCEEEEC-CCCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHhCC
Confidence 3455667899999998 489999999999999988765544334455544443
Done!