Query 008704
Match_columns 557
No_of_seqs 427 out of 1541
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 09:47:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008704.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008704hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwh_A Rhodanese-like domain p 99.9 9.6E-23 3.3E-27 177.4 9.2 101 270-401 2-102 (103)
2 3foj_A Uncharacterized protein 99.9 1.9E-22 6.7E-27 172.3 9.1 99 270-399 2-100 (100)
3 3eme_A Rhodanese-like domain p 99.9 3.2E-22 1.1E-26 171.6 9.2 101 270-401 2-102 (103)
4 1e0c_A Rhodanese, sulfurtransf 99.8 2.9E-21 1E-25 190.9 10.4 115 271-401 148-271 (271)
5 3gk5_A Uncharacterized rhodane 99.8 2.6E-21 9E-26 168.1 8.6 102 269-404 3-104 (108)
6 3d1p_A Putative thiosulfate su 99.8 2.9E-21 9.8E-26 173.7 8.2 115 270-401 23-138 (139)
7 1gmx_A GLPE protein; transfera 99.8 7.4E-21 2.5E-25 164.4 8.8 101 270-402 5-105 (108)
8 3hix_A ALR3790 protein; rhodan 99.8 6.1E-21 2.1E-25 165.1 7.8 100 276-404 2-102 (106)
9 2wlr_A Putative thiosulfate su 99.8 1.4E-20 4.9E-25 198.7 12.0 208 159-402 4-251 (423)
10 2hhg_A Hypothetical protein RP 99.8 2E-20 6.7E-25 167.8 11.1 114 269-404 21-136 (139)
11 1qxn_A SUD, sulfide dehydrogen 99.8 1.3E-20 4.3E-25 170.8 9.8 107 270-404 23-132 (137)
12 3ilm_A ALR3790 protein; rhodan 99.8 1.3E-20 4.5E-25 171.8 9.5 104 272-404 2-106 (141)
13 1urh_A 3-mercaptopyruvate sulf 99.8 4.7E-21 1.6E-25 190.6 4.5 113 272-401 154-278 (280)
14 3olh_A MST, 3-mercaptopyruvate 99.8 8E-21 2.7E-25 192.7 4.7 112 272-399 177-299 (302)
15 1rhs_A Sulfur-substituted rhod 99.8 2.2E-20 7.5E-25 187.9 7.5 117 271-403 161-290 (296)
16 1tq1_A AT5G66040, senescence-a 99.8 3.2E-20 1.1E-24 165.9 7.7 111 270-400 18-128 (129)
17 3nhv_A BH2092 protein; alpha-b 99.8 8E-20 2.7E-24 167.0 10.4 105 270-404 16-123 (144)
18 1uar_A Rhodanese; sulfurtransf 99.8 9.2E-20 3.2E-24 181.5 9.9 116 272-402 148-283 (285)
19 3flh_A Uncharacterized protein 99.8 8.5E-20 2.9E-24 162.1 8.0 101 271-402 16-120 (124)
20 1e0c_A Rhodanese, sulfurtransf 99.8 3.2E-19 1.1E-23 176.3 10.6 120 270-404 9-132 (271)
21 2fsx_A RV0390, COG0607: rhodan 99.8 1.2E-19 4.2E-24 165.4 6.2 117 268-403 3-141 (148)
22 1wv9_A Rhodanese homolog TT165 99.8 7E-20 2.4E-24 154.7 4.1 92 271-396 3-94 (94)
23 2k0z_A Uncharacterized protein 99.8 5.5E-20 1.9E-24 160.1 3.4 99 271-403 6-104 (110)
24 3i2v_A Adenylyltransferase and 99.8 2.3E-19 8E-24 157.3 7.1 116 271-399 2-123 (127)
25 3aay_A Putative thiosulfate su 99.8 3.9E-19 1.3E-23 176.2 8.5 113 272-402 146-276 (277)
26 3hzu_A Thiosulfate sulfurtrans 99.8 5.6E-19 1.9E-23 180.6 9.2 212 159-403 40-310 (318)
27 3tp9_A Beta-lactamase and rhod 99.8 4.6E-19 1.6E-23 189.0 8.1 181 158-401 272-474 (474)
28 1urh_A 3-mercaptopyruvate sulf 99.8 6.7E-19 2.3E-23 175.1 8.6 120 270-404 4-137 (280)
29 1vee_A Proline-rich protein fa 99.8 8.5E-19 2.9E-23 157.6 7.9 115 268-404 3-127 (134)
30 3hzu_A Thiosulfate sulfurtrans 99.8 1.2E-18 4.2E-23 178.0 9.2 119 270-403 40-161 (318)
31 1rhs_A Sulfur-substituted rhod 99.7 1.8E-18 6.2E-23 173.9 10.1 122 268-403 6-144 (296)
32 1t3k_A Arath CDC25, dual-speci 99.7 6.9E-19 2.4E-23 162.1 5.7 108 270-404 28-144 (152)
33 3aay_A Putative thiosulfate su 99.7 2.4E-18 8.3E-23 170.6 8.5 119 271-404 7-128 (277)
34 1uar_A Rhodanese; sulfurtransf 99.7 1.6E-18 5.6E-23 172.4 6.2 119 271-404 9-130 (285)
35 3g5j_A Putative ATP/GTP bindin 99.7 6E-18 2.1E-22 149.1 7.8 109 270-396 5-131 (134)
36 2jtq_A Phage shock protein E; 99.7 5.2E-18 1.8E-22 140.5 6.0 84 286-401 1-84 (85)
37 3olh_A MST, 3-mercaptopyruvate 99.7 1.9E-17 6.6E-22 167.9 10.2 122 268-403 20-159 (302)
38 2ouc_A Dual specificity protei 99.7 2.5E-17 8.7E-22 146.1 7.6 121 271-403 2-140 (142)
39 1c25_A CDC25A; hydrolase, cell 99.7 2.8E-17 9.7E-22 151.1 7.7 109 270-403 23-149 (161)
40 1yt8_A Thiosulfate sulfurtrans 99.7 5.8E-17 2E-21 176.4 11.1 200 159-404 265-480 (539)
41 1okg_A Possible 3-mercaptopyru 99.7 2.2E-17 7.5E-22 172.9 5.8 116 270-403 14-145 (373)
42 2vsw_A Dual specificity protei 99.7 4.6E-17 1.6E-21 148.3 7.1 123 270-404 4-136 (153)
43 1yt8_A Thiosulfate sulfurtrans 99.7 1.2E-16 4.2E-21 173.9 11.3 107 270-404 7-113 (539)
44 2j6p_A SB(V)-AS(V) reductase; 99.6 2E-16 6.9E-21 145.3 8.9 107 270-401 5-122 (152)
45 1qb0_A Protein (M-phase induce 99.6 1.9E-16 6.6E-21 153.1 8.8 109 270-402 44-170 (211)
46 2a2k_A M-phase inducer phospha 99.6 1.9E-16 6.6E-21 147.7 8.2 109 270-402 24-150 (175)
47 3utn_X Thiosulfate sulfurtrans 99.6 3E-16 1E-20 162.3 10.4 163 226-398 99-319 (327)
48 2wlr_A Putative thiosulfate su 99.6 2.1E-16 7.2E-21 166.9 8.4 123 272-405 274-410 (423)
49 2eg4_A Probable thiosulfate su 99.6 5E-16 1.7E-20 150.6 9.9 97 272-400 123-229 (230)
50 3f4a_A Uncharacterized protein 99.6 6.2E-16 2.1E-20 145.3 7.9 115 270-401 31-158 (169)
51 4f67_A UPF0176 protein LPG2838 99.6 1.1E-15 3.9E-20 153.9 9.6 103 270-397 122-224 (265)
52 1hzm_A Dual specificity protei 99.6 4.8E-16 1.6E-20 141.2 3.9 111 270-399 16-145 (154)
53 3op3_A M-phase inducer phospha 99.6 2.2E-15 7.6E-20 147.4 7.6 107 270-401 57-182 (216)
54 1okg_A Possible 3-mercaptopyru 99.6 5.9E-16 2E-20 162.1 3.6 104 285-402 173-295 (373)
55 3ntd_A FAD-dependent pyridine 99.6 3.2E-15 1.1E-19 161.0 8.1 96 267-396 470-565 (565)
56 3utn_X Thiosulfate sulfurtrans 99.5 1.1E-14 3.7E-19 150.6 8.9 121 270-402 28-161 (327)
57 3tg1_B Dual specificity protei 99.5 1.6E-14 5.5E-19 133.1 8.9 107 270-395 11-142 (158)
58 2eg4_A Probable thiosulfate su 99.5 9E-15 3.1E-19 141.8 6.5 98 283-402 3-104 (230)
59 3ics_A Coenzyme A-disulfide re 99.5 1.9E-14 6.6E-19 156.5 9.7 98 266-396 485-582 (588)
60 3r2u_A Metallo-beta-lactamase 99.5 5.1E-15 1.8E-19 158.5 3.3 123 237-394 333-465 (466)
61 1whb_A KIAA0055; deubiqutinati 99.5 7.3E-14 2.5E-18 128.7 9.5 116 270-404 15-149 (157)
62 2gwf_A Ubiquitin carboxyl-term 99.5 7.6E-14 2.6E-18 129.1 8.2 114 270-402 20-152 (157)
63 3tp9_A Beta-lactamase and rhod 99.3 8E-13 2.7E-17 140.9 6.3 103 269-404 272-375 (474)
64 3r2u_A Metallo-beta-lactamase 98.8 3.7E-09 1.3E-13 113.1 6.7 80 284-393 294-375 (466)
65 2f46_A Hypothetical protein; s 95.9 0.0096 3.3E-07 54.2 5.9 104 270-400 28-145 (156)
66 2nt2_A Protein phosphatase sli 77.7 6.2 0.00021 34.5 7.5 27 353-379 80-109 (145)
67 2r0b_A Serine/threonine/tyrosi 77.3 5.8 0.0002 34.9 7.2 27 353-379 89-118 (154)
68 4erc_A Dual specificity protei 76.1 10 0.00034 32.8 8.3 80 273-369 24-104 (150)
69 2hcm_A Dual specificity protei 71.2 10 0.00035 33.9 7.3 27 353-379 88-117 (164)
70 3rgo_A Protein-tyrosine phosph 70.6 10 0.00035 33.0 7.1 27 353-379 88-117 (157)
71 2e0t_A Dual specificity phosph 68.3 6.8 0.00023 34.3 5.4 27 353-379 84-113 (151)
72 2img_A Dual specificity protei 66.0 13 0.00044 32.0 6.6 19 353-371 88-107 (151)
73 1wrm_A Dual specificity phosph 65.2 12 0.00041 33.5 6.5 27 353-379 82-111 (165)
74 3s4e_A Dual specificity protei 62.0 14 0.00047 32.2 6.1 27 353-379 80-109 (144)
75 3ezz_A Dual specificity protei 61.7 25 0.00084 30.4 7.7 27 353-379 80-109 (144)
76 1xri_A AT1G05000; structural g 60.9 6 0.00021 34.6 3.5 27 353-379 91-119 (151)
77 1ywf_A Phosphotyrosine protein 60.7 29 0.00099 34.7 8.9 27 354-380 173-201 (296)
78 3f81_A Dual specificity protei 60.3 19 0.00065 32.5 6.9 26 354-379 115-143 (183)
79 1yz4_A DUSP15, dual specificit 59.5 17 0.00057 32.3 6.3 27 353-379 83-112 (160)
80 2g6z_A Dual specificity protei 58.6 22 0.00075 33.9 7.3 27 353-379 82-111 (211)
81 1v8c_A MOAD related protein; r 51.2 2.2 7.6E-05 39.8 -1.0 25 287-323 122-146 (168)
82 2wgp_A Dual specificity protei 50.8 23 0.00078 32.7 5.9 27 353-379 102-131 (190)
83 2esb_A Dual specificity protei 50.6 26 0.00089 32.2 6.2 27 353-379 96-125 (188)
84 3rz2_A Protein tyrosine phosph 49.8 34 0.0012 31.3 6.8 27 270-296 46-72 (189)
85 2oud_A Dual specificity protei 48.9 32 0.0011 31.2 6.4 27 353-379 86-115 (177)
86 3emu_A Leucine rich repeat and 48.8 20 0.0007 32.1 5.0 27 353-379 86-115 (161)
87 1fpz_A Cyclin-dependent kinase 46.9 40 0.0014 31.4 6.9 18 353-370 132-150 (212)
88 2j16_A SDP-1, tyrosine-protein 45.9 25 0.00086 32.7 5.3 27 353-379 116-145 (182)
89 2jgn_A DBX, DDX3, ATP-dependen 40.6 24 0.00083 32.2 4.2 38 352-390 44-81 (185)
90 2o8n_A APOA-I binding protein; 38.6 53 0.0018 32.6 6.6 45 355-400 80-137 (265)
91 3s4o_A Protein tyrosine phosph 38.5 79 0.0027 27.4 7.2 19 353-371 108-127 (167)
92 1jzt_A Hypothetical 27.5 kDa p 33.2 73 0.0025 31.1 6.6 45 355-400 59-117 (246)
93 2hjv_A ATP-dependent RNA helic 33.1 34 0.0012 30.2 3.8 37 353-390 34-70 (163)
94 4f0j_A Probable hydrolytic enz 33.0 95 0.0032 28.2 7.0 81 353-439 44-128 (315)
95 4fak_A Ribosomal RNA large sub 33.0 53 0.0018 30.6 5.2 77 344-420 64-151 (163)
96 3d3k_A Enhancer of mRNA-decapp 32.7 44 0.0015 32.9 4.9 30 355-385 86-118 (259)
97 1zzw_A Dual specificity protei 31.6 42 0.0014 29.1 4.1 27 353-379 82-111 (149)
98 2rb4_A ATP-dependent RNA helic 31.5 35 0.0012 30.4 3.7 36 353-389 33-68 (175)
99 3rss_A Putative uncharacterize 31.0 48 0.0016 35.9 5.2 48 353-400 51-110 (502)
100 3nme_A Ptpkis1 protein, SEX4 g 29.7 76 0.0026 31.6 6.1 27 353-379 105-134 (294)
101 3d3j_A Enhancer of mRNA-decapp 29.6 52 0.0018 33.3 4.9 45 355-400 133-191 (306)
102 1t5i_A C_terminal domain of A 29.6 41 0.0014 30.1 3.8 36 353-389 30-65 (172)
103 1fuk_A Eukaryotic initiation f 28.8 48 0.0016 29.2 4.1 36 353-389 29-64 (165)
104 2q05_A Late protein H1, dual s 28.3 1.1E+02 0.0039 28.1 6.7 19 353-371 124-143 (195)
105 3to5_A CHEY homolog; alpha(5)b 26.8 81 0.0028 27.5 5.1 43 352-394 10-52 (134)
106 3cm3_A Late protein H1, dual s 25.5 1.1E+02 0.0038 27.3 6.0 27 353-379 107-136 (176)
107 2hxp_A Dual specificity protei 25.2 61 0.0021 28.6 4.0 27 353-379 84-113 (155)
108 1ohe_A CDC14B, CDC14B2 phospha 25.1 1.3E+02 0.0045 30.7 7.1 19 352-370 267-286 (348)
109 3keo_A Redox-sensing transcrip 25.0 60 0.002 31.3 4.2 34 353-386 147-180 (212)
110 3llc_A Putative hydrolase; str 23.3 1.6E+02 0.0055 26.0 6.6 75 355-436 37-117 (270)
111 3sty_A Methylketone synthase 1 22.6 1.6E+02 0.0056 26.1 6.5 79 353-437 10-93 (267)
112 1tvm_A PTS system, galactitol- 22.4 64 0.0022 27.6 3.5 28 353-380 20-52 (113)
113 3eaq_A Heat resistant RNA depe 22.4 66 0.0022 29.8 3.8 37 353-390 30-66 (212)
114 3qit_A CURM TE, polyketide syn 22.1 1.8E+02 0.0061 25.6 6.6 79 353-437 24-107 (286)
115 2i4i_A ATP-dependent RNA helic 20.8 81 0.0028 31.3 4.4 37 352-389 274-310 (417)
116 2y96_A Dual specificity phosph 20.4 78 0.0027 29.9 4.0 27 353-379 138-167 (219)
No 1
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=99.87 E-value=9.6e-23 Score=177.39 Aligned_cols=101 Identities=22% Similarity=0.371 Sum_probs=89.4
Q ss_pred cccCHHHHHHHHhCCCCeEEEEcCChhhHhhCCCCCccccccccccccCcccccchHHhhhcCchhhhhHHHHHHHhhhc
Q 008704 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 349 (557)
Q Consensus 270 g~ISpeea~elL~~~~~avLIDVRs~~Ey~~GHIPGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~L~~ll~alGI~~LK 349 (557)
..||++|+.+++.++++++|||||++.||..||||||+ |+|+.++...+.
T Consensus 2 k~Is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~--------~ip~~~l~~~~~---------------------- 51 (103)
T 3iwh_A 2 KSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAK--------LIPMDTIPDNLN---------------------- 51 (103)
T ss_dssp CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCE--------ECCGGGGGGCGG----------------------
T ss_pred CCcCHHHHHHHHhCCCCeEEEECCChhHHhcCccCCcc--------cCcccchhhhhh----------------------
Confidence 46999999999977778999999999999999999998 899987755432
Q ss_pred ccCCCCeEEEEeCCCcHHHHHHHHHHHccCCcEEEecccHHHHHHcCCceec
Q 008704 350 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKE 401 (557)
Q Consensus 350 ~~~kd~~VVVyC~sG~RS~~AA~~L~~lGy~nV~vLdGG~~aWkaaGLPV~~ 401 (557)
.++++++||+||++|.||..+++.|+.+||+ ++.|+|||.+|+++|+|+++
T Consensus 52 ~l~~~~~ivv~C~~G~rS~~aa~~L~~~G~~-~~~l~GG~~~W~~~g~pves 102 (103)
T 3iwh_A 52 SFNKNEIYYIVCAGGVRSAKVVEYLEANGID-AVNVEGGMHAWGDEGLEIKS 102 (103)
T ss_dssp GCCTTSEEEEECSSSSHHHHHHHHHHTTTCE-EEEETTHHHHHCSSSCBCCC
T ss_pred hhcCCCeEEEECCCCHHHHHHHHHHHHcCCC-EEEecChHHHHHHCCCccee
Confidence 2368999999999999999999999999995 45799999999999999975
No 2
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=99.87 E-value=1.9e-22 Score=172.29 Aligned_cols=99 Identities=20% Similarity=0.329 Sum_probs=88.6
Q ss_pred cccCHHHHHHHHhCCCCeEEEEcCChhhHhhCCCCCccccccccccccCcccccchHHhhhcCchhhhhHHHHHHHhhhc
Q 008704 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 349 (557)
Q Consensus 270 g~ISpeea~elL~~~~~avLIDVRs~~Ey~~GHIPGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~L~~ll~alGI~~LK 349 (557)
..|+++++.++++++++++|||||++.||..||||||+ |+|+.++...+.
T Consensus 2 ~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~--------~ip~~~l~~~~~---------------------- 51 (100)
T 3foj_A 2 ESITVTELKEKILDANPVNIVDVRTDQETAMGIIPGAE--------TIPMNSIPDNLN---------------------- 51 (100)
T ss_dssp CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCE--------ECCGGGGGGCGG----------------------
T ss_pred CccCHHHHHHHHhcCCCcEEEECCCHHHHhcCcCCCCE--------ECCHHHHHHHHH----------------------
Confidence 36899999999966678999999999999999999998 899987654332
Q ss_pred ccCCCCeEEEEeCCCcHHHHHHHHHHHccCCcEEEecccHHHHHHcCCce
Q 008704 350 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRI 399 (557)
Q Consensus 350 ~~~kd~~VVVyC~sG~RS~~AA~~L~~lGy~nV~vLdGG~~aWkaaGLPV 399 (557)
.++++++||+||++|.||..+++.|+.+|| +|++|+||+.+|+++|+|+
T Consensus 52 ~l~~~~~ivvyC~~g~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~g~pv 100 (100)
T 3foj_A 52 YFNDNETYYIICKAGGRSAQVVQYLEQNGV-NAVNVEGGMDEFGDEGLEH 100 (100)
T ss_dssp GSCTTSEEEEECSSSHHHHHHHHHHHTTTC-EEEEETTHHHHHCSSSCBC
T ss_pred hCCCCCcEEEEcCCCchHHHHHHHHHHCCC-CEEEecccHHHHHHcCCCC
Confidence 236889999999999999999999999999 9999999999999999996
No 3
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=99.86 E-value=3.2e-22 Score=171.58 Aligned_cols=101 Identities=22% Similarity=0.380 Sum_probs=90.0
Q ss_pred cccCHHHHHHHHhCCCCeEEEEcCChhhHhhCCCCCccccccccccccCcccccchHHhhhcCchhhhhHHHHHHHhhhc
Q 008704 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 349 (557)
Q Consensus 270 g~ISpeea~elL~~~~~avLIDVRs~~Ey~~GHIPGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~L~~ll~alGI~~LK 349 (557)
..|+++++.++++++++++|||||++.||..||||||+ |+|+.++...+.
T Consensus 2 ~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~--------~ip~~~l~~~~~---------------------- 51 (103)
T 3eme_A 2 KSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAK--------LIPMDTIPDNLN---------------------- 51 (103)
T ss_dssp CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCE--------ECCGGGGGGCGG----------------------
T ss_pred CccCHHHHHHHHhcCCCCEEEECCCHHHHhcCcCCCCE--------EcCHHHHHHHHH----------------------
Confidence 36899999999865678999999999999999999998 899887654332
Q ss_pred ccCCCCeEEEEeCCCcHHHHHHHHHHHccCCcEEEecccHHHHHHcCCceec
Q 008704 350 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKE 401 (557)
Q Consensus 350 ~~~kd~~VVVyC~sG~RS~~AA~~L~~lGy~nV~vLdGG~~aWkaaGLPV~~ 401 (557)
.++++++||+||++|.||..+++.|+.+|| +|++|+|||.+|+++|+|++.
T Consensus 52 ~l~~~~~iv~yC~~g~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~g~p~~~ 102 (103)
T 3eme_A 52 SFNKNEIYYIVCAGGVRSAKVVEYLEANGI-DAVNVEGGMHAWGDEGLEIKS 102 (103)
T ss_dssp GCCTTSEEEEECSSSSHHHHHHHHHHTTTC-EEEEETTHHHHHCSSSCBCCC
T ss_pred hCCCCCeEEEECCCChHHHHHHHHHHHCCC-CeEEeCCCHHHHHHCCCcCCC
Confidence 136889999999999999999999999999 999999999999999999874
No 4
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.84 E-value=2.9e-21 Score=190.92 Aligned_cols=115 Identities=15% Similarity=0.111 Sum_probs=98.0
Q ss_pred ccCHHHHHHHHhCCCCeEEEEcCChhhHh--------hCCCCCccccccccccccCcccccchHHhhhcCchhhhhHHHH
Q 008704 271 DLSPKSTLELLRGKENAVLIDVRHEDLRE--------RDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTA 342 (557)
Q Consensus 271 ~ISpeea~elL~~~~~avLIDVRs~~Ey~--------~GHIPGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~L~~ll~a 342 (557)
.|+++++.+++. +++.+|||||++.||. .||||||+ |+|+.++......++.+ +++++.+.+
T Consensus 148 ~i~~~~l~~~l~-~~~~~liDvR~~~e~~g~~~~~~~~ghIpgA~--------~ip~~~~~~~~~~~~~~-~~l~~~~~~ 217 (271)
T 1e0c_A 148 TASRDYLLGRLG-AADLAIWDARSPQEYRGEKVLAAKGGHIPGAV--------NFEWTAAMDPSRALRIR-TDIAGRLEE 217 (271)
T ss_dssp BCCHHHHHHHTT-CTTEEEEECSCHHHHTTSSCCSSSCSBCTTCE--------ECCGGGGEEGGGTTEEC-TTHHHHHHH
T ss_pred cccHHHHHHHhc-CCCcEEEEcCChhhcCCccCCCCcCCcCCCce--------eccHHHhCCCCCCCCCH-HHHHHHHHH
Confidence 368999999985 4679999999999999 89999998 89988776543333333 677777766
Q ss_pred HHHhhhcccCCCCeEEEEeCCCcHHHHHHHHHHHccCCcEEEecccHHHHHHc-CCceec
Q 008704 343 AVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKE-GLRIKE 401 (557)
Q Consensus 343 lGI~~LK~~~kd~~VVVyC~sG~RS~~AA~~L~~lGy~nV~vLdGG~~aWkaa-GLPV~~ 401 (557)
+++ +++++||+||++|.||..+++.|+.+||++|++|+|||.+|.+. |+|+++
T Consensus 218 ~~~------~~~~~ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~~pv~~ 271 (271)
T 1e0c_A 218 LGI------TPDKEIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTPVEL 271 (271)
T ss_dssp TTC------CTTSEEEEECSSSSHHHHHHHHHHHTTCSCEEECSSHHHHHTTCTTCCCBC
T ss_pred cCC------CCCCCEEEECCchHHHHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCCCcC
Confidence 666 68999999999999999999999999999999999999999998 999863
No 5
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=99.84 E-value=2.6e-21 Score=168.13 Aligned_cols=102 Identities=25% Similarity=0.341 Sum_probs=88.5
Q ss_pred CcccCHHHHHHHHhCCCCeEEEEcCChhhHhhCCCCCccccccccccccCcccccchHHhhhcCchhhhhHHHHHHHhhh
Q 008704 269 SGDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNL 348 (557)
Q Consensus 269 ~g~ISpeea~elL~~~~~avLIDVRs~~Ey~~GHIPGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~L~~ll~alGI~~L 348 (557)
...|+++++.+++.+ ++|||||++.||..||||||+ |+|+.++...+.
T Consensus 3 ~~~is~~el~~~l~~---~~iiDvR~~~e~~~ghIpgA~--------~ip~~~l~~~~~--------------------- 50 (108)
T 3gk5_A 3 YRSINAADLYENIKA---YTVLDVREPFELIFGSIANSI--------NIPISELREKWK--------------------- 50 (108)
T ss_dssp CCEECHHHHHHTTTT---CEEEECSCHHHHTTCBCTTCE--------ECCHHHHHHHGG---------------------
T ss_pred ccEeCHHHHHHHHcC---CEEEECCCHHHHhcCcCCCCE--------EcCHHHHHHHHH---------------------
Confidence 357999999999852 899999999999999999998 899876644322
Q ss_pred cccCCCCeEEEEeCCCcHHHHHHHHHHHccCCcEEEecccHHHHHHcCCceeccCC
Q 008704 349 KIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 404 (557)
Q Consensus 349 K~~~kd~~VVVyC~sG~RS~~AA~~L~~lGy~nV~vLdGG~~aWkaaGLPV~~~~~ 404 (557)
.++++++||+||++|.||..+++.|+.+|| +|++|+|||.+|+++|+|+++..+
T Consensus 51 -~l~~~~~ivvyC~~G~rs~~aa~~L~~~G~-~v~~l~GG~~~W~~~~~~~~~~~~ 104 (108)
T 3gk5_A 51 -ILERDKKYAVICAHGNRSAAAVEFLSQLGL-NIVDVEGGIQSWIEEGYPVVLEHH 104 (108)
T ss_dssp -GSCTTSCEEEECSSSHHHHHHHHHHHTTTC-CEEEETTHHHHHHHTTCCCBCC--
T ss_pred -hCCCCCeEEEEcCCCcHHHHHHHHHHHcCC-CEEEEcCcHHHHHHcCCCCCCCCC
Confidence 236889999999999999999999999999 999999999999999999987544
No 6
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=99.84 E-value=2.9e-21 Score=173.75 Aligned_cols=115 Identities=18% Similarity=0.207 Sum_probs=94.4
Q ss_pred cccCHHHHHHHHhC-CCCeEEEEcCChhhHhhCCCCCccccccccccccCcccccchHHhhhcCchhhhhHHHHHHHhhh
Q 008704 270 GDLSPKSTLELLRG-KENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNL 348 (557)
Q Consensus 270 g~ISpeea~elL~~-~~~avLIDVRs~~Ey~~GHIPGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~L~~ll~alGI~~L 348 (557)
..|+++++.+++.+ +++++|||||++.||..||||||+ |+|+.++... +..++.++.+.+...+
T Consensus 23 ~~is~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi--------nip~~~l~~~---~~~~~~~~~~~~~~~~---- 87 (139)
T 3d1p_A 23 QSYSFEDMKRIVGKHDPNVVLVDVREPSEYSIVHIPASI--------NVPYRSHPDA---FALDPLEFEKQIGIPK---- 87 (139)
T ss_dssp EECCHHHHHHHHHHTCTTEEEEECSCHHHHHHCCCTTCE--------ECCTTTCTTG---GGSCHHHHHHHHSSCC----
T ss_pred ceecHHHHHHHHhCCCCCeEEEECcCHHHHhCCCCCCcE--------EcCHHHhhhh---ccCCHHHHHHHHhccC----
Confidence 47999999999964 357999999999999999999998 8998777432 2233344443332112
Q ss_pred cccCCCCeEEEEeCCCcHHHHHHHHHHHccCCcEEEecccHHHHHHcCCceec
Q 008704 349 KIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKE 401 (557)
Q Consensus 349 K~~~kd~~VVVyC~sG~RS~~AA~~L~~lGy~nV~vLdGG~~aWkaaGLPV~~ 401 (557)
.+++++||+||++|.||..+++.|+.+||++|++|+|||.+|.++|+|+..
T Consensus 88 --~~~~~~ivvyC~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 138 (139)
T 3d1p_A 88 --PDSAKELIFYCASGKRGGEAQKVASSHGYSNTSLYPGSMNDWVSHGGDKLD 138 (139)
T ss_dssp --CCTTSEEEEECSSSHHHHHHHHHHHTTTCCSEEECTTHHHHHHHTTGGGCC
T ss_pred --CCCCCeEEEECCCCchHHHHHHHHHHcCCCCeEEeCCcHHHHHHcCCCCCC
Confidence 368899999999999999999999999999999999999999999999864
No 7
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=99.83 E-value=7.4e-21 Score=164.36 Aligned_cols=101 Identities=21% Similarity=0.294 Sum_probs=88.4
Q ss_pred cccCHHHHHHHHhCCCCeEEEEcCChhhHhhCCCCCccccccccccccCcccccchHHhhhcCchhhhhHHHHHHHhhhc
Q 008704 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 349 (557)
Q Consensus 270 g~ISpeea~elL~~~~~avLIDVRs~~Ey~~GHIPGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~L~~ll~alGI~~LK 349 (557)
..|+++++.+++++ ++.+|||||++.||..||||||+ |+|+.++...+.
T Consensus 5 ~~i~~~~l~~~~~~-~~~~liDvR~~~e~~~ghIpgA~--------~ip~~~l~~~~~---------------------- 53 (108)
T 1gmx_A 5 ECINVADAHQKLQE-KEAVLVDIRDPQSFAMGHAVQAF--------HLTNDTLGAFMR---------------------- 53 (108)
T ss_dssp EEECHHHHHHHHHT-TCCEEEECSCHHHHHHCEETTCE--------ECCHHHHHHHHH----------------------
T ss_pred cccCHHHHHHHHhC-CCCEEEEcCCHHHHHhCCCccCE--------eCCHHHHHHHHH----------------------
Confidence 36899999999964 46999999999999999999998 899866543322
Q ss_pred ccCCCCeEEEEeCCCcHHHHHHHHHHHccCCcEEEecccHHHHHHcCCceecc
Q 008704 350 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKEL 402 (557)
Q Consensus 350 ~~~kd~~VVVyC~sG~RS~~AA~~L~~lGy~nV~vLdGG~~aWkaaGLPV~~~ 402 (557)
.++++++||+||++|.||..+++.|+.+||++|++|+||+.+|.++ +|++.+
T Consensus 54 ~l~~~~~ivvyc~~g~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~-~p~~~~ 105 (108)
T 1gmx_A 54 DNDFDTPVMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQ-FPAEVA 105 (108)
T ss_dssp HSCTTSCEEEECSSSSHHHHHHHHHHHHTCSSEEEETTHHHHHHHH-CGGGEE
T ss_pred hcCCCCCEEEEcCCCchHHHHHHHHHHcCCceEEEecCCHHHHHHh-CCcccc
Confidence 1368899999999999999999999999999999999999999999 998764
No 8
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=99.83 E-value=6.1e-21 Score=165.07 Aligned_cols=100 Identities=14% Similarity=0.171 Sum_probs=79.1
Q ss_pred HHHHHHhCC-CCeEEEEcCChhhHhhCCCCCccccccccccccCcccccchHHhhhcCchhhhhHHHHHHHhhhcccCCC
Q 008704 276 STLELLRGK-ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKIVQDR 354 (557)
Q Consensus 276 ea~elL~~~-~~avLIDVRs~~Ey~~GHIPGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~L~~ll~alGI~~LK~~~kd 354 (557)
++.+++.++ ++++|||||++.||..||||||+ |+|+.++...... .++++
T Consensus 2 el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi--------~ip~~~l~~~~~~---------------------~l~~~ 52 (106)
T 3hix_A 2 VLKSRLEWGEPAFTILDVRDRSTYNDGHIMGAM--------AMPIEDLVDRASS---------------------SLEKS 52 (106)
T ss_dssp -----------CCEEEECSCHHHHHTCEETTCE--------ECCGGGHHHHHHH---------------------HSCTT
T ss_pred hHHHHHHcCCCCeEEEECCCHHHHhcCcCCCCE--------eCCHHHHHHHHHh---------------------cCCCC
Confidence 566677532 46999999999999999999998 8998776443211 13678
Q ss_pred CeEEEEeCCCcHHHHHHHHHHHccCCcEEEecccHHHHHHcCCceeccCC
Q 008704 355 SKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 404 (557)
Q Consensus 355 ~~VVVyC~sG~RS~~AA~~L~~lGy~nV~vLdGG~~aWkaaGLPV~~~~~ 404 (557)
++||+||.+|.||..+++.|+.+||++|++|+|||.+|+++|+|+.+..+
T Consensus 53 ~~ivvyc~~g~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~~~~~~~~ 102 (106)
T 3hix_A 53 RDIYVYGAGDEQTSQAVNLLRSAGFEHVSELKGGLAAWKAIGGPTELEHH 102 (106)
T ss_dssp SCEEEECSSHHHHHHHHHHHHHTTCSCEEECTTHHHHHHHTTCCEEECCE
T ss_pred CeEEEEECCCChHHHHHHHHHHcCCcCEEEecCCHHHHHHCCCCCCCCCC
Confidence 89999999999999999999999999999999999999999999988544
No 9
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.83 E-value=1.4e-20 Score=198.72 Aligned_cols=208 Identities=15% Similarity=0.137 Sum_probs=158.2
Q ss_pred cchhhhhhhhhHHhhhhhhccCcceE---------EEeecccCCCCCccHHHHHhHhhhhccceeeeccchHHHHHHHHH
Q 008704 159 TVAAVDVLRNTIVALEESMTNGASFV---------VYYYGTTKESLPPEIRDALNLYEDRAVKLWRPVGSALQQVSVAIE 229 (557)
Q Consensus 159 ~~~~~d~l~~~~~~~~~~~~~~~~~~---------~~~yG~~~~~lp~~i~~~l~~~e~~ag~Vl~~~G~a~~q~~~~iE 229 (557)
+-++.+||++.+..-+-.+.|.|+.. .|.-||++..+.-++.. +. .| . ...|+
T Consensus 4 ~~is~~~L~~~l~~~~~~ilD~r~~~~~~~~~~~~~y~~gHIPgAv~~~~~~-l~----------lp--~-----~~~f~ 65 (423)
T 2wlr_A 4 AELAKPLTLDQLQQQNGKAIDTRPSAFYNGWPQTLNGPSGHELAALNLSASW-LD----------KM--S-----TEQLN 65 (423)
T ss_dssp CCCCSCBCHHHHHHTTCEEEECSCHHHHHTCCSSTTCCCSBCTTCEECCGGG-GG----------GC--C-----HHHHH
T ss_pred cccCHHHHHHHhCCCCeEEEECCCcccccccccccccccCCCCCCccCCHHH-hc----------CC--C-----HHHHH
Confidence 34677888887765566788888764 35568888776665532 11 01 1 23477
Q ss_pred HHHHhcCCCCCCCceehhhhhhhHHHHHHHHHHHHhcCCC----------------------cccCHHHHHHHHhC----
Q 008704 230 GLERSLGFDPNDPIVPFVVFLGTSATLWIFYWWWTYGGYS----------------------GDLSPKSTLELLRG---- 283 (557)
Q Consensus 230 ~l~~~lG~~~~~pVv~~~v~vg~~~~l~~l~~l~~~~g~~----------------------g~ISpeea~elL~~---- 283 (557)
...+.+|+.++++||+|... +....+||++++.|+. ..++++++.+++..
T Consensus 66 ~~~~~lgi~~~~~vVvy~~~----~~a~r~~w~l~~~G~~~V~vl~Gg~~~~g~~~~~~~~~~~i~~~~l~~~~~~~~~~ 141 (423)
T 2wlr_A 66 AWIKQHNLKTDAPVALYGND----KDVDAVKTRLQKAGLTHISILSDALSEPSRLQKLPHFEQLVYPQWLHDLQQGKEVT 141 (423)
T ss_dssp HHHHHTTCCTTSCEEEESCH----HHHHHHHHHHHHTTCCCEEEBTTTTSCGGGCBCCTTGGGEECHHHHHHHHTTCCCT
T ss_pred HHHHHcCCCCCCeEEEECCC----CCHHHHHHHHHHcCCceeEeccchhhcCCCcccCCCCCcccCHHHHHHHhhccccc
Confidence 77788999999999865322 2233467776553331 24688899888853
Q ss_pred ---CCCeEEEEcC--ChhhHhhCCCCCccccccccccccCcccccchHHhhhcCchhhhhHHHHHHHhhhcccCCCCeEE
Q 008704 284 ---KENAVLIDVR--HEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKIVQDRSKVI 358 (557)
Q Consensus 284 ---~~~avLIDVR--s~~Ey~~GHIPGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~L~~ll~alGI~~LK~~~kd~~VV 358 (557)
+++.+|||+| ++.||+.||||||+ |+|+.++.......+++++++++.+.++|+ +++++||
T Consensus 142 ~~~~~~~~liDvR~~~~~e~~~ghIpgA~--------nip~~~~~~~~~~~~~~~~~l~~~~~~~gi------~~~~~iv 207 (423)
T 2wlr_A 142 AKPAGDWKVIEAAWGAPKLYLISHIPGAD--------YIDTNEVESEPLWNKVSDEQLKAMLAKHGI------RHDTTVI 207 (423)
T ss_dssp TCCSSCEEEEEEESSSCSHHHHCBCTTCE--------EEEGGGTEETTTTEECCHHHHHHHHHHTTC------CTTSEEE
T ss_pred cccCCCeEEEEecCCCchhhccCcCCCcE--------EcCHHHhccCCCCCCCCHHHHHHHHHHcCC------CCCCeEE
Confidence 2478999999 99999999999998 899877754333567778888888887777 6899999
Q ss_pred EEeCCCcHHHHHHHHHHHccCCcEEEecccHHHHHHcCCceecc
Q 008704 359 VMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKEL 402 (557)
Q Consensus 359 VyC~sG~RS~~AA~~L~~lGy~nV~vLdGG~~aWkaaGLPV~~~ 402 (557)
+||++|.||..+++.|+.+||++|++|+|||.+|...|+|++.+
T Consensus 208 vyC~~G~~a~~~~~~L~~~G~~~v~~l~Gg~~~W~~~g~pv~~g 251 (423)
T 2wlr_A 208 LYGRDVYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVERG 251 (423)
T ss_dssp EECSSHHHHHHHHHHHHHHTCSCEEEETTTHHHHHHTTCCCBCS
T ss_pred EECCCchHHHHHHHHHHHcCCCCeEEECCCHHHHhhCCCCcccC
Confidence 99999999999999999999999999999999999999999874
No 10
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=99.83 E-value=2e-20 Score=167.76 Aligned_cols=114 Identities=22% Similarity=0.305 Sum_probs=90.4
Q ss_pred CcccCHHHHHHHHhC-CCCeEEEEcCChhhHhh-CCCCCccccccccccccCcccccchHHhhhcCchhhhhHHHHHHHh
Q 008704 269 SGDLSPKSTLELLRG-KENAVLIDVRHEDLRER-DGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIR 346 (557)
Q Consensus 269 ~g~ISpeea~elL~~-~~~avLIDVRs~~Ey~~-GHIPGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~L~~ll~alGI~ 346 (557)
...|+++++.+++.+ +++++|||||++.||.. ||||||+ |+|+.++....... .+...
T Consensus 21 ~~~is~~~l~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA~--------~ip~~~l~~~~~~~--~~~~~---------- 80 (139)
T 2hhg_A 21 IETLTTADAIALHKSGASDVVIVDIRDPREIERDGKIPGSF--------SCTRGMLEFWIDPQ--SPYAK---------- 80 (139)
T ss_dssp SEEECHHHHHHHHHTTCTTEEEEECSCHHHHHHHCCCTTCE--------ECCGGGHHHHHCTT--STTCC----------
T ss_pred cCccCHHHHHHHHhccCCCeEEEECCCHHHHHhCCCCCCeE--------ECChHHHHHhcCcc--chhhh----------
Confidence 347999999999963 35799999999999999 9999998 89987664322110 00000
Q ss_pred hhcccCCCCeEEEEeCCCcHHHHHHHHHHHccCCcEEEecccHHHHHHcCCceeccCC
Q 008704 347 NLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 404 (557)
Q Consensus 347 ~LK~~~kd~~VVVyC~sG~RS~~AA~~L~~lGy~nV~vLdGG~~aWkaaGLPV~~~~~ 404 (557)
..++++++||+||++|.||..+++.|+.+||++|++|+|||.+|.++|+|++.+.+
T Consensus 81 --~~~~~~~~ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 136 (139)
T 2hhg_A 81 --PIFQEDKKFVFYCAGGLRSALAAKTAQDMGLKPVAHIEGGFGAWRDAGGPIEAWAP 136 (139)
T ss_dssp --GGGGSSSEEEEECSSSHHHHHHHHHHHHHTCCSEEEETTHHHHHHHTTCCCC----
T ss_pred --ccCCCCCeEEEECCCChHHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCCeecCCC
Confidence 11368899999999999999999999999999999999999999999999987543
No 11
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=99.83 E-value=1.3e-20 Score=170.76 Aligned_cols=107 Identities=22% Similarity=0.361 Sum_probs=92.2
Q ss_pred cccCHHHHHHHHhCCCCeEEEEcCChhhHhh-CC--CCCccccccccccccCcccccchHHhhhcCchhhhhHHHHHHHh
Q 008704 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRER-DG--IPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIR 346 (557)
Q Consensus 270 g~ISpeea~elL~~~~~avLIDVRs~~Ey~~-GH--IPGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~L~~ll~alGI~ 346 (557)
..|+++++.+++.++++++|||||++.||.. || ||||+ |+|+.++.....
T Consensus 23 ~~is~~el~~~l~~~~~~~liDVR~~~E~~~~gh~~IpgAi--------nip~~~l~~~~~------------------- 75 (137)
T 1qxn_A 23 VMLSPKDAYKLLQENPDITLIDVRDPDELKAMGKPDVKNYK--------HMSRGKLEPLLA------------------- 75 (137)
T ss_dssp EEECHHHHHHHHHHCTTSEEEECCCHHHHHHTCEECCSSEE--------ECCTTTSHHHHH-------------------
T ss_pred cccCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCcCCCCCE--------EcchHHhhhHHh-------------------
Confidence 4799999999996345799999999999999 99 99998 899877643110
Q ss_pred hhcccCCCCeEEEEeCCCcHHHHHHHHHHHccCCcEEEecccHHHHHHcCCceeccCC
Q 008704 347 NLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 404 (557)
Q Consensus 347 ~LK~~~kd~~VVVyC~sG~RS~~AA~~L~~lGy~nV~vLdGG~~aWkaaGLPV~~~~~ 404 (557)
+..++++++|||||++|.||..+++.|+.+||++|++|+|||.+|.++|+|++.+.+
T Consensus 76 -~~~l~~~~~ivvyC~~G~rS~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 132 (137)
T 1qxn_A 76 -KSGLDPEKPVVVFCKTAARAALAGKTLREYGFKTIYNSEGGMDKWLEEGLPSLDRSH 132 (137)
T ss_dssp -HHCCCTTSCEEEECCSSSCHHHHHHHHHHHTCSCEEEESSCHHHHHHTTCCEECCCC
T ss_pred -hccCCCCCeEEEEcCCCcHHHHHHHHHHHcCCcceEEEcCcHHHHHHCCCCcccccc
Confidence 012368899999999999999999999999999999999999999999999987654
No 12
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=99.82 E-value=1.3e-20 Score=171.83 Aligned_cols=104 Identities=13% Similarity=0.180 Sum_probs=90.3
Q ss_pred cCHHHHHHHHhCC-CCeEEEEcCChhhHhhCCCCCccccccccccccCcccccchHHhhhcCchhhhhHHHHHHHhhhcc
Q 008704 272 LSPKSTLELLRGK-ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKI 350 (557)
Q Consensus 272 ISpeea~elL~~~-~~avLIDVRs~~Ey~~GHIPGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~L~~ll~alGI~~LK~ 350 (557)
|+++++.++++++ ++++|||||++.||..||||||+ |+|+.++...... .
T Consensus 2 Is~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi--------~ip~~~l~~~~~~---------------------~ 52 (141)
T 3ilm_A 2 SDAHVLKSRLEWGEPAFTILDVRDRSTYNDGHIMGAM--------AMPIEDLVDRASS---------------------S 52 (141)
T ss_dssp CCHHHHHHHHHHSCSCEEEEECSCHHHHHHCEETTCE--------ECCGGGHHHHHHT---------------------T
T ss_pred CCHHHHHHHHhcCCCCEEEEECCCHHHHhCCCCCCCE--------EcCHHHHHHHHHh---------------------c
Confidence 8999999999643 46999999999999999999998 8998766443211 1
Q ss_pred cCCCCeEEEEeCCCcHHHHHHHHHHHccCCcEEEecccHHHHHHcCCceeccCC
Q 008704 351 VQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 404 (557)
Q Consensus 351 ~~kd~~VVVyC~sG~RS~~AA~~L~~lGy~nV~vLdGG~~aWkaaGLPV~~~~~ 404 (557)
++++++|||||.+|.||..+++.|+.+||++|++|+|||.+|+++|+|++...+
T Consensus 53 l~~~~~ivvyC~~g~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 106 (141)
T 3ilm_A 53 LEKSRDIYVYGAGDEQTSQAVNLLRSAGFEHVSELKGGLAAWKAIGGPTEGIIE 106 (141)
T ss_dssp SCTTSEEEEECSSHHHHHHHHHHHHHTTCCSEEECTTHHHHHHHTTCCEEEEC-
T ss_pred CCCCCeEEEEECCChHHHHHHHHHHHcCCCCEEEecCHHHHHHHCCCCcccCCC
Confidence 368899999999999999999999999999999999999999999999988653
No 13
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.81 E-value=4.7e-21 Score=190.59 Aligned_cols=113 Identities=21% Similarity=0.245 Sum_probs=87.3
Q ss_pred cCHHHHHHHHhCCCCeEEEEcCChhhH-----------hhCCCCCccccccccccccCcccccchHHhhhcCchhhhhHH
Q 008704 272 LSPKSTLELLRGKENAVLIDVRHEDLR-----------ERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTL 340 (557)
Q Consensus 272 ISpeea~elL~~~~~avLIDVRs~~Ey-----------~~GHIPGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~L~~ll 340 (557)
|+++++.+++.+ ++++|||||++.|| +.||||||+ |+|+.++.. ...+++++++++.+
T Consensus 154 i~~~e~~~~~~~-~~~~liDvR~~~e~~G~~~~~~~~~~~ghIpgA~--------nip~~~~~~--~~~~~~~~~l~~~~ 222 (280)
T 1urh_A 154 VKVTDVLLASHE-NTAQIIDARPAARFNAEVDEPRPGLRRGHIPGAL--------NVPWTELVR--EGELKTTDELDAIF 222 (280)
T ss_dssp CCHHHHHHHHHH-TCSEEEECSCHHHHSSCCCC----CCSSSCTTCE--------ECCGGGGBS--SSSBCCHHHHHHHH
T ss_pred EcHHHHHHHhcC-CCcEEEeCCchhhcccccCCCCCCCcCccCCCce--------EeeHHHhhc--CCccCCHHHHHHHH
Confidence 899999999863 57899999999999 689999998 899887765 22344555666655
Q ss_pred HHHHHhhhcccCCCCeEEEEeCCCcHHHHHHHHHHHccCCcEEEecccHHHHHH-cCCceec
Q 008704 341 TAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVK-EGLRIKE 401 (557)
Q Consensus 341 ~alGI~~LK~~~kd~~VVVyC~sG~RS~~AA~~L~~lGy~nV~vLdGG~~aWka-aGLPV~~ 401 (557)
.+.++ +++++||+||++|.||..++..|+.+||++|++|+|||.+|.+ .|+|+++
T Consensus 223 ~~~~~------~~~~~ivv~C~~G~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~Pv~~ 278 (280)
T 1urh_A 223 FGRGV------SYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVEP 278 (280)
T ss_dssp HTTTC------CSSSCEEEECCSSSTHHHHHHHHHHTTCSSCEEECCSCCC-----------
T ss_pred HHcCC------CCCCCEEEECChHHHHHHHHHHHHHcCCCCceeeCChHHHHhcCCCCCcee
Confidence 55554 6899999999999999999999999999999999999999987 5999875
No 14
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.81 E-value=8e-21 Score=192.72 Aligned_cols=112 Identities=13% Similarity=0.123 Sum_probs=97.0
Q ss_pred cCHHHHHHHHhCCCCeEEEEcCChhhH-----------hhCCCCCccccccccccccCcccccchHHhhhcCchhhhhHH
Q 008704 272 LSPKSTLELLRGKENAVLIDVRHEDLR-----------ERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTL 340 (557)
Q Consensus 272 ISpeea~elL~~~~~avLIDVRs~~Ey-----------~~GHIPGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~L~~ll 340 (557)
++++++.+++. +++++|||||++.|| +.||||||+ |+|+.++.... ..+++++++++.+
T Consensus 177 i~~~e~~~~~~-~~~~~liDvR~~~ef~G~~~~p~~~~~~GhIpGAi--------niP~~~l~~~~-~~~~~~~~l~~~~ 246 (302)
T 3olh_A 177 KTYEDIKENLE-SRRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGTV--------NIPFTDFLSQE-GLEKSPEEIRHLF 246 (302)
T ss_dssp ECHHHHHHHHH-HCCSEEEECSCHHHHHTSSCCSSTTCCCCCCTTCE--------ECCGGGGBCSS-SCBCCHHHHHHHH
T ss_pred ecHHHHHHhhc-CCCcEEEecCCHHHccccccCCCcCCcCccCCCce--------ecCHHHhcCCC-CccCCHHHHHHHH
Confidence 67889988885 357899999999999 789999999 99998775433 2456677888877
Q ss_pred HHHHHhhhcccCCCCeEEEEeCCCcHHHHHHHHHHHccCCcEEEecccHHHHHHcCCce
Q 008704 341 TAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRI 399 (557)
Q Consensus 341 ~alGI~~LK~~~kd~~VVVyC~sG~RS~~AA~~L~~lGy~nV~vLdGG~~aWkaaGLPV 399 (557)
.+.++ +++++||+||++|.||..++..|+.+||++|++|+|||.+|.++|+|.
T Consensus 247 ~~~~~------~~~~~iv~yC~sG~rs~~a~~~L~~~G~~~v~~~~Gg~~~W~~~~~P~ 299 (302)
T 3olh_A 247 QEKKV------DLSKPLVATCGSGVTACHVALGAYLCGKPDVPIYDGSWVEWYMRARPE 299 (302)
T ss_dssp HHTTC------CTTSCEEEECSSSSTTHHHHHHHHTTTCCCCCEESSHHHHHHHHHCCC
T ss_pred HhcCC------CCCCCEEEECCChHHHHHHHHHHHHcCCCCeeEeCCcHHHHhhccCCC
Confidence 77666 689999999999999999999999999999999999999999999884
No 15
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.80 E-value=2.2e-20 Score=187.93 Aligned_cols=117 Identities=15% Similarity=0.095 Sum_probs=98.0
Q ss_pred ccCHHHHHHHHhCCCCeEEEEcCChhhH------------hhCCCCCccccccccccccCcccccchHHhhhcCchhhhh
Q 008704 271 DLSPKSTLELLRGKENAVLIDVRHEDLR------------ERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDD 338 (557)
Q Consensus 271 ~ISpeea~elL~~~~~avLIDVRs~~Ey------------~~GHIPGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~L~~ 338 (557)
.|+++++.+++. +++++|||||++.|| +.||||||+ |+|+.++.... ..+++++++++
T Consensus 161 ~i~~~e~~~~~~-~~~~~liDvR~~~e~~G~~~~~~~~~~~~ghIpgA~--------nip~~~l~~~~-~~~~~~~~l~~ 230 (296)
T 1rhs_A 161 LKTYEQVLENLE-SKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSV--------NMPFMNFLTED-GFEKSPEELRA 230 (296)
T ss_dssp EECHHHHHHHHH-HCCSEEEECSCHHHHHTSSCCSSSSSCCCCEETTCE--------ECCGGGGBCTT-SCBCCHHHHHH
T ss_pred EEcHHHHHHHhc-CCCceEEeCCchhhcccccCCcccCCCcCccCCCCE--------eecHHHhcCCC-CcCCCHHHHHH
Confidence 478999999886 357899999999999 889999998 89998775432 23445566666
Q ss_pred HHHHHHHhhhcccCCCCeEEEEeCCCcHHHHHHHHHHHccCCcEEEecccHHHHHH-cCCceeccC
Q 008704 339 TLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVK-EGLRIKELK 403 (557)
Q Consensus 339 ll~alGI~~LK~~~kd~~VVVyC~sG~RS~~AA~~L~~lGy~nV~vLdGG~~aWka-aGLPV~~~~ 403 (557)
.+...++ +++++||+||++|.||..++..|+.+||++|++|+|||.+|.. .++|++.+.
T Consensus 231 ~~~~~~~------~~~~~ivv~C~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~pv~~~~ 290 (296)
T 1rhs_A 231 MFEAKKV------DLTKPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHRAPPETWVSQ 290 (296)
T ss_dssp HHHHTTC------CTTSCEEEECSSSSTHHHHHHHHHHTTCCCCEEESSHHHHHHHHSCGGGEEBT
T ss_pred HHHHcCC------CCCCCEEEECCcHHHHHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCCcccCC
Confidence 6655555 6899999999999999999999999999999999999999998 899998754
No 16
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=99.80 E-value=3.2e-20 Score=165.88 Aligned_cols=111 Identities=22% Similarity=0.256 Sum_probs=90.3
Q ss_pred cccCHHHHHHHHhCCCCeEEEEcCChhhHhhCCCCCccccccccccccCcccccchHHhhhcCchhhhhHHHHHHHhhhc
Q 008704 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 349 (557)
Q Consensus 270 g~ISpeea~elL~~~~~avLIDVRs~~Ey~~GHIPGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~L~~ll~alGI~~LK 349 (557)
..|+++++.++++ ++++|||||++.||..||||||+ |+|+..+... ..++++++++..+ +
T Consensus 18 ~~is~~e~~~~l~--~~~~lIDvR~~~e~~~ghIpgAi--------nip~~~~~~~--~~~~~~~~~~~~~--------~ 77 (129)
T 1tq1_A 18 SSVSVTVAHDLLL--AGHRYLDVRTPEEFSQGHACGAI--------NVPYMNRGAS--GMSKNTDFLEQVS--------S 77 (129)
T ss_dssp EEEEHHHHHHHHH--HTCCEEEESCHHHHHHCCBTTBE--------ECCSCCCSTT--TCCCTTTHHHHHT--------T
T ss_pred cccCHHHHHHHhc--CCCEEEECCCHHHHhcCCCCCcE--------ECcHhhcccc--cccCCHHHHHHHH--------h
Confidence 4799999999985 46899999999999999999998 8888544321 2223333333211 1
Q ss_pred ccCCCCeEEEEeCCCcHHHHHHHHHHHccCCcEEEecccHHHHHHcCCcee
Q 008704 350 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIK 400 (557)
Q Consensus 350 ~~~kd~~VVVyC~sG~RS~~AA~~L~~lGy~nV~vLdGG~~aWkaaGLPV~ 400 (557)
.++++++||+||++|.||..+++.|+.+||++|++|+|||.+|..+|+|++
T Consensus 78 ~l~~~~~ivvyC~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 128 (129)
T 1tq1_A 78 HFGQSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKNGLPTK 128 (129)
T ss_dssp TCCTTSSEEEEESSCSHHHHHHHHHHHHHCCSEEEEECCHHHHHHHTCCCC
T ss_pred hCCCCCeEEEECCCCcHHHHHHHHHHHcCCCCeEEeCCcHHHHHhCCCCCC
Confidence 246889999999999999999999999999999999999999999999985
No 17
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=99.80 E-value=8e-20 Score=167.00 Aligned_cols=105 Identities=17% Similarity=0.196 Sum_probs=90.5
Q ss_pred cccCHHHHHHHHhCC-CCeEEEEcCChhhHhhCCCCCccccccccccccCcccccchHHhhhcCchhhhhHHHHHHHhhh
Q 008704 270 GDLSPKSTLELLRGK-ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNL 348 (557)
Q Consensus 270 g~ISpeea~elL~~~-~~avLIDVRs~~Ey~~GHIPGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~L~~ll~alGI~~L 348 (557)
..|+++++.+++.++ ++++|||||++.||..||||||+ |+|+.++.... +
T Consensus 16 ~~is~~el~~~l~~~~~~~~liDvR~~~ey~~ghIpgAi--------nip~~~l~~~~---------------------~ 66 (144)
T 3nhv_A 16 YETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAI--------SIPGNKINEDT---------------------T 66 (144)
T ss_dssp TEEEHHHHHHHHHTTCCSEEEEECSCHHHHHHCBCTTCE--------ECCGGGCSTTT---------------------T
T ss_pred cccCHHHHHHHHHcCCCCEEEEECcCHHHHhcCCCCCCE--------ECCHHHHhHHH---------------------H
Confidence 368999999999754 47999999999999999999998 89987765310 0
Q ss_pred cccCCCCeEEEEeCCC--cHHHHHHHHHHHccCCcEEEecccHHHHHHcCCceeccCC
Q 008704 349 KIVQDRSKVIVMDADG--TRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 404 (557)
Q Consensus 349 K~~~kd~~VVVyC~sG--~RS~~AA~~L~~lGy~nV~vLdGG~~aWkaaGLPV~~~~~ 404 (557)
..++++++||+||++| .||..+++.|+.+|| +|++|+|||.+|+++|+|++...+
T Consensus 67 ~~l~~~~~ivvyC~~g~~~rs~~aa~~L~~~G~-~v~~l~GG~~~W~~~g~pv~~~~~ 123 (144)
T 3nhv_A 67 KRLSKEKVIITYCWGPACNGATKAAAKFAQLGF-RVKELIGGIEYWRKENGEVEGTLG 123 (144)
T ss_dssp TTCCTTSEEEEECSCTTCCHHHHHHHHHHHTTC-EEEEEESHHHHHHHTTCCCBSSSG
T ss_pred hhCCCCCeEEEEECCCCccHHHHHHHHHHHCCC-eEEEeCCcHHHHHHCCCCccCCCC
Confidence 1236889999999999 699999999999999 699999999999999999998655
No 18
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.80 E-value=9.2e-20 Score=181.46 Aligned_cols=116 Identities=18% Similarity=0.194 Sum_probs=96.6
Q ss_pred cCHHHHHHHHhC--CCCeEEEEcCChhhHh----------------hCCCCCccccccccccccCcccccchHHhhhcCc
Q 008704 272 LSPKSTLELLRG--KENAVLIDVRHEDLRE----------------RDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGG 333 (557)
Q Consensus 272 ISpeea~elL~~--~~~avLIDVRs~~Ey~----------------~GHIPGA~gav~~~~~nIPl~eL~~~l~~ll~n~ 333 (557)
|+++++.++++. ..+..|||||++.||. .||||||+ |+|+.++.... ..++++
T Consensus 148 i~~~el~~~l~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~~~~~~ghIpgA~--------~ip~~~~~~~~-~~~~~~ 218 (285)
T 1uar_A 148 AYRDDVLEHIIKVKEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAK--------NIPWAKAVNPD-GTFKSA 218 (285)
T ss_dssp ECHHHHHHHHHHHHTTSEEEEECSCHHHHHTCC--------CCCSCCSBCTTCE--------ECCGGGGBCTT-SCBCCH
T ss_pred EcHHHHHHHHhhcccCCCcEEEcCCccceeeeccccccccccccccCCcCCCcc--------ccCHHHhcCCC-CcCCCH
Confidence 889999998830 1245799999999997 79999998 89987765432 245666
Q ss_pred hhhhhHHHHHHHhhhcccCCCCeEEEEeCCCcHHHHHHHHHH-HccCCcEEEecccHHHHH-HcCCceecc
Q 008704 334 RELDDTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLR-KLGVMRAFLVQGGFQSWV-KEGLRIKEL 402 (557)
Q Consensus 334 ~~L~~ll~alGI~~LK~~~kd~~VVVyC~sG~RS~~AA~~L~-~lGy~nV~vLdGG~~aWk-aaGLPV~~~ 402 (557)
+++++.+.++|+ +++++||+||++|.||..+++.|+ .+||++|++|+|||.+|. .+|+|++++
T Consensus 219 ~~l~~~~~~~g~------~~~~~ivvyC~~G~rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~g~pv~~g 283 (285)
T 1uar_A 219 EELRALYEPLGI------TKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWTEWGNLVGVPIAKG 283 (285)
T ss_dssp HHHHHHHGGGTC------CTTSEEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCBCS
T ss_pred HHHHHHHHHcCC------CCCCCEEEECCchHHHHHHHHHHHHHcCCCCcceeCchHHHHhcCCCCCcccC
Confidence 777776666665 689999999999999999999999 999999999999999998 799999874
No 19
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=99.79 E-value=8.5e-20 Score=162.06 Aligned_cols=101 Identities=17% Similarity=0.269 Sum_probs=87.6
Q ss_pred ccCHHHHHHHHhCC-CCeEEEEcCChhhH-hhCCCCCccccccccccccCcccccchHHhhhcCchhhhhHHHHHHHhhh
Q 008704 271 DLSPKSTLELLRGK-ENAVLIDVRHEDLR-ERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNL 348 (557)
Q Consensus 271 ~ISpeea~elL~~~-~~avLIDVRs~~Ey-~~GHIPGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~L~~ll~alGI~~L 348 (557)
.|+++++.+++.++ ++++|||||++.|| ..||||||+ |+|+.++...+.
T Consensus 16 ~is~~el~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA~--------nip~~~l~~~~~--------------------- 66 (124)
T 3flh_A 16 YIDHHTVLADMQNATGKYVVLDVRNAPAQVKKDQIKGAI--------AMPAKDLATRIG--------------------- 66 (124)
T ss_dssp EECHHHHHHHHHHTCCCEEEEECCCSCHHHHCCEETTCE--------ECCHHHHHHHGG---------------------
T ss_pred eecHHHHHHHHHcCCCCEEEEECCCHHHHHhcCcCCCCE--------ECCHHHHHHHHh---------------------
Confidence 69999999999754 35999999999998 999999998 899876643322
Q ss_pred cccCCCCeEEEEeCCCcH--HHHHHHHHHHccCCcEEEecccHHHHHHcCCceecc
Q 008704 349 KIVQDRSKVIVMDADGTR--SKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKEL 402 (557)
Q Consensus 349 K~~~kd~~VVVyC~sG~R--S~~AA~~L~~lGy~nV~vLdGG~~aWkaaGLPV~~~ 402 (557)
.++++++||+||++|.| |..+++.|+.+||+ |++|+||+.+|+.+|+|+.+.
T Consensus 67 -~l~~~~~ivvyC~~g~r~~s~~a~~~L~~~G~~-v~~l~GG~~~W~~~~~p~~~~ 120 (124)
T 3flh_A 67 -ELDPAKTYVVYDWTGGTTLGKTALLVLLSAGFE-AYELAGALEGWKGMQLPLEHH 120 (124)
T ss_dssp -GSCTTSEEEEECSSSSCSHHHHHHHHHHHHTCE-EEEETTHHHHHHHTTCCEEC-
T ss_pred -cCCCCCeEEEEeCCCCchHHHHHHHHHHHcCCe-EEEeCCcHHHHHHcCCCCCcc
Confidence 23689999999999998 89999999999996 999999999999999998764
No 20
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.78 E-value=3.2e-19 Score=176.33 Aligned_cols=120 Identities=17% Similarity=0.209 Sum_probs=103.2
Q ss_pred cccCHHHHHHHHhCCCCeEEEEcCChhhHhhCCCCCccccccccccccCcccccch---HHhhhcCchhhhhHHHHHHHh
Q 008704 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGS---VKKLLRGGRELDDTLTAAVIR 346 (557)
Q Consensus 270 g~ISpeea~elL~~~~~avLIDVRs~~Ey~~GHIPGA~gav~~~~~nIPl~eL~~~---l~~ll~n~~~L~~ll~alGI~ 346 (557)
..|+++++.++++ +++++|||||++.||..||||||+ |+|+..+... ...++++++.+.+.+..+|+
T Consensus 9 ~~is~~~l~~~l~-~~~~~iiDvR~~~ey~~ghIpgA~--------~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~gi- 78 (271)
T 1e0c_A 9 LVIEPADLQARLS-APELILVDLTSAARYAEGHIPGAR--------FVDPKRTQLGQPPAPGLQPPREQLESLFGELGH- 78 (271)
T ss_dssp SEECHHHHHTTTT-CTTEEEEECSCHHHHHHCBSTTCE--------ECCGGGGSCCCTTCTTSCCCHHHHHHHHHHHTC-
T ss_pred ceeeHHHHHHhcc-CCCeEEEEcCCcchhhhCcCCCCE--------ECCHHHhccCCCCCCCCCCCHHHHHHHHHHcCC-
Confidence 4799999999985 467999999999999999999998 8888665432 23456666777877877777
Q ss_pred hhcccCCCCeEEEEeCCCc-HHHHHHHHHHHccCCcEEEecccHHHHHHcCCceeccCC
Q 008704 347 NLKIVQDRSKVIVMDADGT-RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 404 (557)
Q Consensus 347 ~LK~~~kd~~VVVyC~sG~-RS~~AA~~L~~lGy~nV~vLdGG~~aWkaaGLPV~~~~~ 404 (557)
+++++|||||++|. +|.++++.|+.+||++|++|+||+.+|+.+|+|++...+
T Consensus 79 -----~~~~~vvvyc~~g~~~s~~a~~~L~~~G~~~v~~L~GG~~~w~~~g~p~~~~~~ 132 (271)
T 1e0c_A 79 -----RPEAVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRPLSRELP 132 (271)
T ss_dssp -----CTTCEEEEECSSSSHHHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCCCC
T ss_pred -----CCCCeEEEEcCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHcCCCccCCCC
Confidence 68999999999998 999999999999999999999999999999999987544
No 21
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=99.78 E-value=1.2e-19 Score=165.42 Aligned_cols=117 Identities=29% Similarity=0.419 Sum_probs=88.6
Q ss_pred CCcccCHHHHHHHHhCCCCeEEEEcCChhhHhh-CCC------CCccccccccccccCcccccchHHhhhcCchh---hh
Q 008704 268 YSGDLSPKSTLELLRGKENAVLIDVRHEDLRER-DGI------PDLRRGARFRYASVYLPEVGGSVKKLLRGGRE---LD 337 (557)
Q Consensus 268 ~~g~ISpeea~elL~~~~~avLIDVRs~~Ey~~-GHI------PGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~---L~ 337 (557)
|...|+++++.+++.++++++|||||++.||.. ||| |||+ |+|+.++... .++.+ +.
T Consensus 3 ~~~~is~~el~~~l~~~~~~~liDVR~~~e~~~~ghi~~~g~~pgAv--------~ip~~~~~~~-----~~~~~~~~l~ 69 (148)
T 2fsx_A 3 YAGDITPLQAWEMLSDNPRAVLVDVRCEAEWRFVGVPDLSSLGREVV--------YVEWATSDGT-----HNDNFLAELR 69 (148)
T ss_dssp CSEEECHHHHHHHHHHCTTCEEEECSCHHHHHHTCEECCGGGTCCCE--------ECCSBCTTSC-----BCTTHHHHHH
T ss_pred ccccCCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCCccccCCCCcE--------Eeeeeccccc-----cCHHHHHHHH
Confidence 566899999999996446899999999999997 999 9998 8888651110 01111 22
Q ss_pred hHHHHHHHhhhcccCCCCeEEEEeCCCcHHHHHHHHHHHccCCcEEEecccH------------HHHHHcCCceeccC
Q 008704 338 DTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGF------------QSWVKEGLRIKELK 403 (557)
Q Consensus 338 ~ll~alGI~~LK~~~kd~~VVVyC~sG~RS~~AA~~L~~lGy~nV~vLdGG~------------~aWkaaGLPV~~~~ 403 (557)
+.+.+.++ +++++|||||++|.||..+++.|+.+||++|++|+||| .+|+++|+|++...
T Consensus 70 ~~l~~~~~------~~~~~ivvyC~~G~rS~~aa~~L~~~G~~~v~~l~GG~~~w~~~~g~~~~~~W~~~glp~~~~~ 141 (148)
T 2fsx_A 70 DRIPADAD------QHERPVIFLCRSGNRSIGAAEVATEAGITPAYNVLDGFEGHLDAEGHRGATGWRAVGLPWRQGR 141 (148)
T ss_dssp HHCC-------------CCEEEECSSSSTHHHHHHHHHHTTCCSEEEETTTTTCCCCTTSCCCSSSTTTTTCSEECC-
T ss_pred HHHhhccC------CCCCEEEEEcCCChhHHHHHHHHHHcCCcceEEEcCChhhhhhhccccccccHHHcCCCCCccc
Confidence 22222334 68899999999999999999999999999999999999 79999999998744
No 22
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=99.78 E-value=7e-20 Score=154.74 Aligned_cols=92 Identities=21% Similarity=0.222 Sum_probs=75.5
Q ss_pred ccCHHHHHHHHhCCCCeEEEEcCChhhHhhCCCCCccccccccccccCcccccchHHhhhcCchhhhhHHHHHHHhhhcc
Q 008704 271 DLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKI 350 (557)
Q Consensus 271 ~ISpeea~elL~~~~~avLIDVRs~~Ey~~GHIPGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~L~~ll~alGI~~LK~ 350 (557)
.|+++++.+++++ +.+|||||++.||..||||||+ |+|+.++...+. .
T Consensus 3 ~is~~~l~~~~~~--~~~liDvR~~~e~~~ghi~gAi--------~ip~~~l~~~~~----------------------~ 50 (94)
T 1wv9_A 3 KVRPEELPALLEE--GVLVVDVRPADRRSTPLPFAAE--------WVPLEKIQKGEH----------------------G 50 (94)
T ss_dssp EECGGGHHHHHHT--TCEEEECCCC--CCSCCSSCCE--------ECCHHHHTTTCC----------------------C
T ss_pred cCCHHHHHHHHHC--CCEEEECCCHHHHhcccCCCCE--------ECCHHHHHHHHH----------------------h
Confidence 5899999999863 7899999999999999999998 899876643221 2
Q ss_pred cCCCCeEEEEeCCCcHHHHHHHHHHHccCCcEEEecccHHHHHHcC
Q 008704 351 VQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEG 396 (557)
Q Consensus 351 ~~kd~~VVVyC~sG~RS~~AA~~L~~lGy~nV~vLdGG~~aWkaaG 396 (557)
+++ ++||+||++|.||..+++.|+.+||+ |++|+||+.+|+++|
T Consensus 51 l~~-~~ivvyC~~g~rs~~a~~~L~~~G~~-v~~l~GG~~~W~~~G 94 (94)
T 1wv9_A 51 LPR-RPLLLVCEKGLLSQVAALYLEAEGYE-AMSLEGGLQALTQGK 94 (94)
T ss_dssp CCS-SCEEEECSSSHHHHHHHHHHHHHTCC-EEEETTGGGCC----
T ss_pred CCC-CCEEEEcCCCChHHHHHHHHHHcCCc-EEEEcccHHHHHhCc
Confidence 357 89999999999999999999999998 999999999999875
No 23
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=99.77 E-value=5.5e-20 Score=160.07 Aligned_cols=99 Identities=19% Similarity=0.280 Sum_probs=83.0
Q ss_pred ccCHHHHHHHHhCCCCeEEEEcCChhhHhhCCCCCccccccccccccCcccccchHHhhhcCchhhhhHHHHHHHhhhcc
Q 008704 271 DLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKI 350 (557)
Q Consensus 271 ~ISpeea~elL~~~~~avLIDVRs~~Ey~~GHIPGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~L~~ll~alGI~~LK~ 350 (557)
.|+++++ +.++++|||||++.||..||||||+ |+|+.++...+. ..++
T Consensus 6 ~is~~el-----~~~~~~liDvR~~~e~~~ghIpgAi--------~ip~~~l~~~~~--------------~~~~----- 53 (110)
T 2k0z_A 6 AISLEEV-----NFNDFIVVDVRELDEYEELHLPNAT--------LISVNDQEKLAD--------------FLSQ----- 53 (110)
T ss_dssp EEETTTC-----CGGGSEEEEEECHHHHHHSBCTTEE--------EEETTCHHHHHH--------------HHHS-----
T ss_pred eeCHHHh-----ccCCeEEEECCCHHHHhcCcCCCCE--------EcCHHHHHHHHH--------------hccc-----
Confidence 4666665 2357899999999999999999998 899877644322 1222
Q ss_pred cCCCCeEEEEeCCCcHHHHHHHHHHHccCCcEEEecccHHHHHHcCCceeccC
Q 008704 351 VQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELK 403 (557)
Q Consensus 351 ~~kd~~VVVyC~sG~RS~~AA~~L~~lGy~nV~vLdGG~~aWkaaGLPV~~~~ 403 (557)
+++++||+||++|.||..+++.|+.+||++ ++|+||+.+|.++|+|++.+.
T Consensus 54 -~~~~~ivvyC~~G~rs~~aa~~L~~~G~~~-~~l~GG~~~W~~~g~p~~~~~ 104 (110)
T 2k0z_A 54 -HKDKKVLLHCRAGRRALDAAKSMHELGYTP-YYLEGNVYDFEKYGFRMVYDD 104 (110)
T ss_dssp -CSSSCEEEECSSSHHHHHHHHHHHHTTCCC-EEEESCGGGTTTTTCCCBCCC
T ss_pred -CCCCEEEEEeCCCchHHHHHHHHHHCCCCE-EEecCCHHHHHHCCCcEecCC
Confidence 688999999999999999999999999999 999999999999999998754
No 24
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=99.77 E-value=2.3e-19 Score=157.32 Aligned_cols=116 Identities=17% Similarity=0.168 Sum_probs=86.1
Q ss_pred ccCHHHHHHHHhCCCCeEEEEcCChhhHhhCCCCCccccccccccccCcccccchHHhhhcCchhhhhHHHHHHHhhhcc
Q 008704 271 DLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKI 350 (557)
Q Consensus 271 ~ISpeea~elL~~~~~avLIDVRs~~Ey~~GHIPGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~L~~ll~alGI~~LK~ 350 (557)
+|+++++.+++.++++++|||||++.||..||||||+ |+|+.++......++. .+...+... ..-..
T Consensus 2 ~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~--------~ip~~~~~~~~~~~~~---~~~~~l~~~--~~~~~ 68 (127)
T 3i2v_A 2 RVSVTDYKRLLDSGAFHLLLDVRPQVEVDICRLPHAL--------HIPLKHLERRDAESLK---LLKEAIWEE--KQGTQ 68 (127)
T ss_dssp EECHHHHHHHHHHTCCCEEEECSCHHHHHHCCCTTSE--------ECCHHHHHTTCHHHHH---HHHHHHHHH--HTTC-
T ss_pred CCCHHHHHHHHhCCCCeEEEECCCHHHhhheecCCce--------eCChHHHhhhhhhhHH---HHHHHHhhh--ccccc
Confidence 5899999999975556999999999999999999998 8998776543322110 111111110 00000
Q ss_pred cCCCCeEEEEeCCCcHHHHHHHHHHHc------cCCcEEEecccHHHHHHcCCce
Q 008704 351 VQDRSKVIVMDADGTRSKGIARSLRKL------GVMRAFLVQGGFQSWVKEGLRI 399 (557)
Q Consensus 351 ~~kd~~VVVyC~sG~RS~~AA~~L~~l------Gy~nV~vLdGG~~aWkaaGLPV 399 (557)
.+++++||+||++|.||..+++.|+.+ ||.+|++|+|||.+|.+++.|.
T Consensus 69 ~~~~~~ivv~C~~G~rs~~a~~~L~~~gg~~~~G~~~v~~l~GG~~~W~~~~~~~ 123 (127)
T 3i2v_A 69 EGAAVPIYVICKLGNDSQKAVKILQSLSAAQELDPLTVRDVVGGLMAWAAKIDGT 123 (127)
T ss_dssp --CCEEEEEECSSSSHHHHHHHHHHHHHHTTSSSCEEEEEETTHHHHHHHHTCTT
T ss_pred CCCCCeEEEEcCCCCcHHHHHHHHHHhhccccCCCceEEEecCCHHHHHHhcCCC
Confidence 135669999999999999999999999 6889999999999999877653
No 25
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.77 E-value=3.9e-19 Score=176.22 Aligned_cols=113 Identities=21% Similarity=0.189 Sum_probs=94.5
Q ss_pred cCHHHHHHHHhCCCCeEEEEcCChhhHhh----------------CCCCCccccccccccccCcccccchHHhhhcCchh
Q 008704 272 LSPKSTLELLRGKENAVLIDVRHEDLRER----------------DGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRE 335 (557)
Q Consensus 272 ISpeea~elL~~~~~avLIDVRs~~Ey~~----------------GHIPGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~ 335 (557)
++++++.+++.+ + . |||||++.||.. ||||||+ |+|+.++.... ..++++++
T Consensus 146 ~~~~el~~~~~~-~-~-liDvR~~~e~~~~~~~~~~~~~~~~~~~ghIpgA~--------~ip~~~~~~~~-~~~~~~~~ 213 (277)
T 3aay_A 146 AFRDEVLAAINV-K-N-LIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAI--------NVPWSRAANED-GTFKSDEE 213 (277)
T ss_dssp ECHHHHHHTTTT-S-E-EEECSCHHHHHTSCCC-----CCCCSCCSBCTTCE--------ECCGGGGBCTT-SCBCCHHH
T ss_pred cCHHHHHHhcCC-C-C-EEEeCChHHeeeeecccccccccccccCCcCCCce--------ecCHHHhcCCC-CcCCCHHH
Confidence 678899888853 2 3 999999999985 9999998 89987654322 33556677
Q ss_pred hhhHHHHHHHhhhcccCCCCeEEEEeCCCcHHHHHHHHHHH-ccCCcEEEecccHHHHHH-cCCceecc
Q 008704 336 LDDTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRK-LGVMRAFLVQGGFQSWVK-EGLRIKEL 402 (557)
Q Consensus 336 L~~ll~alGI~~LK~~~kd~~VVVyC~sG~RS~~AA~~L~~-lGy~nV~vLdGG~~aWka-aGLPV~~~ 402 (557)
+++.+.++++ +++++||+||++|.||..+++.|+. +||++|++|+|||.+|.+ +|+|++.+
T Consensus 214 l~~~~~~~~~------~~~~~iv~yC~~G~rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~g~pv~~g 276 (277)
T 3aay_A 214 LAKLYADAGL------DNSKETIAYCRIGERSSHTWFVLRELLGHQNVKNYDGSWTEYGSLVGAPIELG 276 (277)
T ss_dssp HHHHHHHHTC------CTTSCEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCBCC
T ss_pred HHHHHHHcCC------CCCCCEEEEcCcHHHHHHHHHHHHHHcCCCcceeeCchHHHHhcCCCCCCccC
Confidence 7777777776 6899999999999999999999995 999999999999999998 99999763
No 26
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.76 E-value=5.6e-19 Score=180.56 Aligned_cols=212 Identities=17% Similarity=0.156 Sum_probs=139.4
Q ss_pred cchhhhhhhhhHHhhhhhhccCcceEE-EeecccCCCCCccHHHHHhHhhhhccceeeeccchHHHHHHHHHHHHHhcCC
Q 008704 159 TVAAVDVLRNTIVALEESMTNGASFVV-YYYGTTKESLPPEIRDALNLYEDRAVKLWRPVGSALQQVSVAIEGLERSLGF 237 (557)
Q Consensus 159 ~~~~~d~l~~~~~~~~~~~~~~~~~~~-~~yG~~~~~lp~~i~~~l~~~e~~ag~Vl~~~G~a~~q~~~~iE~l~~~lG~ 237 (557)
.-++.++|++.+..-+-.|.|.|+.-. |.-||++..+.-++...++... .+ ..-. ...|+.....+|+
T Consensus 40 ~~is~~~l~~~l~~~~~~iiDvR~~~e~y~~gHIpGAi~ip~~~~~~~~~--~~----~~~~-----~~~~~~~l~~lgi 108 (318)
T 3hzu_A 40 RLVTADWLSAHMGAPGLAIVESDEDVLLYDVGHIPGAVKIDWHTDLNDPR--VR----DYIN-----GEQFAELMDRKGI 108 (318)
T ss_dssp GEECHHHHHHHTTCTTEEEEECCSSTTSGGGCBCTTEEECCHHHHHBCSS--SS----SBCC-----HHHHHHHHHHTTC
T ss_pred ceecHHHHHHhccCCCEEEEECCCChhHHhcCcCCCCeEeCchhhhccCc--cc----CCCC-----HHHHHHHHHHcCC
Confidence 346677777766544556778887654 7889998776655543332110 01 0111 1224444455677
Q ss_pred CCCCCceehhhhhhhHHHHHHHHHHHHhcCC--------------------------------C--------cccCHHHH
Q 008704 238 DPNDPIVPFVVFLGTSATLWIFYWWWTYGGY--------------------------------S--------GDLSPKST 277 (557)
Q Consensus 238 ~~~~pVv~~~v~vg~~~~l~~l~~l~~~~g~--------------------------------~--------g~ISpeea 277 (557)
+.+++||+|.-. |..... .+||.++..|| . -.++++++
T Consensus 109 ~~~~~vVvyc~~-g~~~a~-~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~i~~~el 186 (318)
T 3hzu_A 109 ARDDTVVIYGDK-SNWWAA-YALWVFTLFGHADVRLLNGGRDLWLAERRETTLDVPTKTCTGYPVVQRNDAPIRAFRDDV 186 (318)
T ss_dssp CTTCEEEEECSG-GGHHHH-HHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBCCCCCCCCCCCCCCCCCCTTTBCCHHHH
T ss_pred CCCCeEEEECCC-CCccHH-HHHHHHHHcCCCceEEccCCHHHHhhcCCCcccCCCCCCCCccccccCCCccccccHHHH
Confidence 777777653221 111111 12333222111 0 12578999
Q ss_pred HHHHhCCCCeEEEEcCChhhHhh----------------CCCCCccccccccccccCcccccchHHhhhcCchhhhhHHH
Q 008704 278 LELLRGKENAVLIDVRHEDLRER----------------DGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLT 341 (557)
Q Consensus 278 ~elL~~~~~avLIDVRs~~Ey~~----------------GHIPGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~L~~ll~ 341 (557)
.+++++ + +|||||++.||.. ||||||+ |+|+.++.... ..+++++++++.+
T Consensus 187 ~~~l~~--~-~liDvR~~~e~~~~~~~~~~~~~~~~~~~GhIpGA~--------niP~~~~~~~~-g~~~~~~~l~~~~- 253 (318)
T 3hzu_A 187 LAILGA--Q-PLIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTAV--------HIPWGKAADES-GRFRSREELERLY- 253 (318)
T ss_dssp HHHTTT--S-CEEECSCHHHHHTSCSSCTTSCSCSCSSCSBCTTCE--------ECCGGGGBCTT-SCBCCHHHHHHHT-
T ss_pred HHhhcC--C-eEEecCCHHHhcccccCccccccccCCcCcCCCCee--------ecCHHHhcCCC-CcCCCHHHHHHHh-
Confidence 998853 3 8999999999998 9999998 89987665432 2334445555443
Q ss_pred HHHHhhhcccCCCCeEEEEeCCCcHHHHHHHHHHH-ccCCcEEEecccHHHHHH-cCCceeccC
Q 008704 342 AAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRK-LGVMRAFLVQGGFQSWVK-EGLRIKELK 403 (557)
Q Consensus 342 alGI~~LK~~~kd~~VVVyC~sG~RS~~AA~~L~~-lGy~nV~vLdGG~~aWka-aGLPV~~~~ 403 (557)
.+ ++++++||+||++|.||..++..|++ +||++|++|+|||.+|.+ .|+|++++.
T Consensus 254 -~~------l~~~~~ivvyC~sG~rs~~a~~~L~~~~G~~~v~~~~GG~~~W~~~~g~Pv~~g~ 310 (318)
T 3hzu_A 254 -DF------INPDDQTVVYCRIGERSSHTWFVLTHLLGKADVRNYDGSWTEWGNAVRVPIVAGE 310 (318)
T ss_dssp -TT------CCTTCCCEEECSSSHHHHHHHHHHHHTSCCSSCEECTTHHHHHTTSTTCCCBCSS
T ss_pred -cC------CCCCCcEEEEcCChHHHHHHHHHHHHHcCCCCeeEeCCcHHHHhcCCCCCcccCC
Confidence 12 37899999999999999999999997 999999999999999995 799999864
No 27
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.76 E-value=4.6e-19 Score=189.01 Aligned_cols=181 Identities=18% Similarity=0.149 Sum_probs=131.1
Q ss_pred ccchhhhhhhhhHHhhhhhhccCcceEEEeecccCCCCCccHHHHHhHhhhhccceeeeccchHHHHHHHHHHHHHhcCC
Q 008704 158 ATVAAVDVLRNTIVALEESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDRAVKLWRPVGSALQQVSVAIEGLERSLGF 237 (557)
Q Consensus 158 a~~~~~d~l~~~~~~~~~~~~~~~~~~~~~yG~~~~~lp~~i~~~l~~~e~~ag~Vl~~~G~a~~q~~~~iE~l~~~lG~ 237 (557)
...++.++|++.+.. . .+.|.|+.-.|.-||++..+.-... . .++...+.++
T Consensus 272 ~~~is~~~l~~~l~~-~-~iiD~R~~~~y~~ghIpGA~~i~~~------------------~-------~~~~~~~~l~- 323 (474)
T 3tp9_A 272 RVDLPPERVRAWREG-G-VVLDVRPADAFAKRHLAGSLNIPWN------------------K-------SFVTWAGWLL- 323 (474)
T ss_dssp ECCCCGGGHHHHHHT-S-EEEECSCHHHHHHSEETTCEECCSS------------------T-------THHHHHHHHC-
T ss_pred CceeCHHHHHHHhCC-C-EEEECCChHHHhccCCCCeEEECcc------------------h-------HHHHHHHhcC-
Confidence 345677888887765 3 8889998777888888766543221 1 1222233334
Q ss_pred CCCCCceehhhhhhhHHHHHHHHHHHHhcCCC----------------------cccCHHHHHHHHhCCCCeEEEEcCCh
Q 008704 238 DPNDPIVPFVVFLGTSATLWIFYWWWTYGGYS----------------------GDLSPKSTLELLRGKENAVLIDVRHE 295 (557)
Q Consensus 238 ~~~~pVv~~~v~vg~~~~l~~l~~l~~~~g~~----------------------g~ISpeea~elL~~~~~avLIDVRs~ 295 (557)
++++++|++.-- +. ...+||.++..||. ..++++++.+++. +++.+|||+|++
T Consensus 324 ~~~~~vvvy~~~-~~---~~~~~~~L~~~G~~~v~~~l~G~~~W~~~g~~~~~~~~i~~~~l~~~~~-~~~~~lvDvR~~ 398 (474)
T 3tp9_A 324 PADRPIHLLAAD-AI---APDVIRALRSIGIDDVVDWTDPAAVDRAAPDDVASYANVSPDEVRGALA-QQGLWLLDVRNV 398 (474)
T ss_dssp CSSSCEEEECCT-TT---HHHHHHHHHHTTCCCEEEEECGGGGTTCCGGGEECCEEECHHHHHHTTT-TTCCEEEECSCH
T ss_pred CCCCeEEEEECC-Cc---HHHHHHHHHHcCCcceEEecCcHHHHHhcccccccccccCHHHHHHHhc-CCCcEEEECCCH
Confidence 566666643221 11 11134443333321 3588999999885 468999999999
Q ss_pred hhHhhCCCCCccccccccccccCcccccchHHhhhcCchhhhhHHHHHHHhhhcccCCCCeEEEEeCCCcHHHHHHHHHH
Q 008704 296 DLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLR 375 (557)
Q Consensus 296 ~Ey~~GHIPGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~L~~ll~alGI~~LK~~~kd~~VVVyC~sG~RS~~AA~~L~ 375 (557)
.||+.||||||+ |+|+.++...+. .++++++||+||++|.||..+++.|+
T Consensus 399 ~e~~~ghIpgA~--------~ip~~~l~~~~~----------------------~l~~~~~vvv~C~~G~ra~~a~~~L~ 448 (474)
T 3tp9_A 399 DEWAGGHLPQAH--------HIPLSKLAAHIH----------------------DVPRDGSVCVYCRTGGRSAIAASLLR 448 (474)
T ss_dssp HHHHHCBCTTCE--------ECCHHHHTTTGG----------------------GSCSSSCEEEECSSSHHHHHHHHHHH
T ss_pred HHHhcCcCCCCE--------ECCHHHHHHHHh----------------------cCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 999999999998 899877654322 13688999999999999999999999
Q ss_pred HccCCcEEEecccHHHHHHcCCceec
Q 008704 376 KLGVMRAFLVQGGFQSWVKEGLRIKE 401 (557)
Q Consensus 376 ~lGy~nV~vLdGG~~aWkaaGLPV~~ 401 (557)
.+||++|++|+|||.+|.++|+|+++
T Consensus 449 ~~G~~~v~~~~Gg~~~W~~~g~p~~~ 474 (474)
T 3tp9_A 449 AHGVGDVRNMVGGYEAWRGKGFPVEA 474 (474)
T ss_dssp HHTCSSEEEETTHHHHHHHTTCCCBC
T ss_pred HcCCCCEEEecChHHHHHhCCCCCCC
Confidence 99999999999999999999999863
No 28
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.76 E-value=6.7e-19 Score=175.07 Aligned_cols=120 Identities=16% Similarity=0.210 Sum_probs=101.5
Q ss_pred cccCHHHHHHHHhCCCCeEEEEcC----------ChhhHhhCCCCCccccccccccccCcccccch---HHhhhcCchhh
Q 008704 270 GDLSPKSTLELLRGKENAVLIDVR----------HEDLRERDGIPDLRRGARFRYASVYLPEVGGS---VKKLLRGGREL 336 (557)
Q Consensus 270 g~ISpeea~elL~~~~~avLIDVR----------s~~Ey~~GHIPGA~gav~~~~~nIPl~eL~~~---l~~ll~n~~~L 336 (557)
..|+++++.+++. +++++|||+| ++.||..||||||+ |+|+.++... ...++++++.+
T Consensus 4 ~~is~~~l~~~l~-~~~~~iiDvR~~~~~~~~~~~~~e~~~ghIpgAi--------~ip~~~l~~~~~~~~~~~~~~~~~ 74 (280)
T 1urh_A 4 WFVGADWLAEHID-DPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAV--------FFDIEALSDHTSPLPHMLPRPETF 74 (280)
T ss_dssp CEECHHHHHTTTT-CTTEEEEECCCCCSSCTTCCHHHHHHHSBCTTCE--------ECCGGGGSCSSSSSSSCCCCHHHH
T ss_pred ceeeHHHHHHhcC-CCCeEEEEeeccCCcccccchhhhhhhCcCCCCE--------ECCHHHhcCCCCCCCCCCCCHHHH
Confidence 3689999999985 4689999999 78999999999998 8887655432 12355666777
Q ss_pred hhHHHHHHHhhhcccCCCCeEEEEeCCCcH-HHHHHHHHHHccCCcEEEecccHHHHHHcCCceeccCC
Q 008704 337 DDTLTAAVIRNLKIVQDRSKVIVMDADGTR-SKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 404 (557)
Q Consensus 337 ~~ll~alGI~~LK~~~kd~~VVVyC~sG~R-S~~AA~~L~~lGy~nV~vLdGG~~aWkaaGLPV~~~~~ 404 (557)
++.+..+|+ +++++||+||++|.+ |.++++.|+.+||++|++|+||+.+|+.+|+|++...+
T Consensus 75 ~~~~~~~gi------~~~~~ivvyc~~g~~~a~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 137 (280)
T 1urh_A 75 AVAMRELGV------NQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGAV 137 (280)
T ss_dssp HHHHHHTTC------CTTSEEEEECSSSCSSHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBBSCC
T ss_pred HHHHHHcCC------CCCCeEEEECCCCCccHHHHHHHHHHcCCCCEEEecCCHHHHHHCCCcccCCCC
Confidence 777877777 689999999999998 99999999999999999999999999999999987544
No 29
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=99.76 E-value=8.5e-19 Score=157.56 Aligned_cols=115 Identities=19% Similarity=0.195 Sum_probs=88.7
Q ss_pred CCcccCHHHHHHHHhCCCCeEEEEcCChhhHhhCCC-------CCccccccccccccCcccccchHHhhhcCchhhhhHH
Q 008704 268 YSGDLSPKSTLELLRGKENAVLIDVRHEDLRERDGI-------PDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTL 340 (557)
Q Consensus 268 ~~g~ISpeea~elL~~~~~avLIDVRs~~Ey~~GHI-------PGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~L~~ll 340 (557)
..+.|+++++.+++.++++++|||||++.||..+|+ |||+ |+|+.++... .++++ +
T Consensus 3 ~~~~is~~e~~~~l~~~~~~~liDVR~~~E~~~~~~~~~~g~~~ga~--------~ip~~~~~~~--------~~~~~-l 65 (134)
T 1vee_A 3 SGSSGSAKNAYTKLGTDDNAQLLDIRATADFRQVGSPNIKGLGKKAV--------STVYNGEDKP--------GFLKK-L 65 (134)
T ss_dssp CSCBCCHHHHHHHHHHCTTEEEEECSCHHHHHHTCEECCTTTSCCCE--------ECCCCGGGHH--------HHHHH-H
T ss_pred CCCccCHHHHHHHHHhCCCeEEEEcCCHHHHhhcCCCcccccCCceE--------EeecccccCh--------hHHHH-H
Confidence 345799999999996456799999999999987544 5887 8887654210 01111 1
Q ss_pred HHHHHhhhcccCCCCeEEEEeCCCcHHHHHHHHHHHccCCcEEEecccH---HHHHHcCCceeccCC
Q 008704 341 TAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGF---QSWVKEGLRIKELKS 404 (557)
Q Consensus 341 ~alGI~~LK~~~kd~~VVVyC~sG~RS~~AA~~L~~lGy~nV~vLdGG~---~aWkaaGLPV~~~~~ 404 (557)
.+. ...+++++|||||++|.||..+++.|+.+||++|++|.||| .+|+++|+|++....
T Consensus 66 ~~~-----~~~~~~~~ivv~C~sG~RS~~aa~~L~~~G~~~v~~l~GG~~~~~~W~~~g~p~~~~~~ 127 (134)
T 1vee_A 66 SLK-----FKDPENTTLYILDKFDGNSELVAELVALNGFKSAYAIKDGAEGPRGWLNSSLPWIEPKK 127 (134)
T ss_dssp HTT-----CSCGGGCEEEEECSSSTTHHHHHHHHHHHTCSEEEECTTTTTSTTSSGGGTCCEECCCC
T ss_pred HHH-----hCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCcceEEecCCccCCcchhhcCCCCCCCCC
Confidence 000 00157899999999999999999999999999999999999 789999999987544
No 30
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.75 E-value=1.2e-18 Score=178.03 Aligned_cols=119 Identities=10% Similarity=0.129 Sum_probs=100.8
Q ss_pred cccCHHHHHHHHhCCCCeEEEEcCChhh-HhhCCCCCccccccccccccCcc-cccchHHhhhcCchhhhhHHHHHHHhh
Q 008704 270 GDLSPKSTLELLRGKENAVLIDVRHEDL-RERDGIPDLRRGARFRYASVYLP-EVGGSVKKLLRGGRELDDTLTAAVIRN 347 (557)
Q Consensus 270 g~ISpeea~elL~~~~~avLIDVRs~~E-y~~GHIPGA~gav~~~~~nIPl~-eL~~~l~~ll~n~~~L~~ll~alGI~~ 347 (557)
..|+++++.+++. +++++|||||++.| |..||||||+ |+|+. .+......+++++.+++..+..+|+
T Consensus 40 ~~is~~~l~~~l~-~~~~~iiDvR~~~e~y~~gHIpGAi--------~ip~~~~~~~~~~~~~~~~~~~~~~l~~lgi-- 108 (318)
T 3hzu_A 40 RLVTADWLSAHMG-APGLAIVESDEDVLLYDVGHIPGAV--------KIDWHTDLNDPRVRDYINGEQFAELMDRKGI-- 108 (318)
T ss_dssp GEECHHHHHHHTT-CTTEEEEECCSSTTSGGGCBCTTEE--------ECCHHHHHBCSSSSSBCCHHHHHHHHHHTTC--
T ss_pred ceecHHHHHHhcc-CCCEEEEECCCChhHHhcCcCCCCe--------EeCchhhhccCcccCCCCHHHHHHHHHHcCC--
Confidence 3599999999995 46799999999976 9999999998 88863 2322233456666788888888777
Q ss_pred hcccCCCCeEEEEeCCCc-HHHHHHHHHHHccCCcEEEecccHHHHHHcCCceeccC
Q 008704 348 LKIVQDRSKVIVMDADGT-RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELK 403 (557)
Q Consensus 348 LK~~~kd~~VVVyC~sG~-RS~~AA~~L~~lGy~nV~vLdGG~~aWkaaGLPV~~~~ 403 (557)
+++++||+||++|. +|.++++.|+.+||++|++|+||+.+|+++|+|++...
T Consensus 109 ----~~~~~vVvyc~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~ 161 (318)
T 3hzu_A 109 ----ARDDTVVIYGDKSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRETTLDV 161 (318)
T ss_dssp ----CTTCEEEEECSGGGHHHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBCCC
T ss_pred ----CCCCeEEEECCCCCccHHHHHHHHHHcCCCceEEccCCHHHHhhcCCCcccCC
Confidence 68999999999988 99999999999999999999999999999999998753
No 31
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.75 E-value=1.8e-18 Score=173.94 Aligned_cols=122 Identities=20% Similarity=0.310 Sum_probs=102.9
Q ss_pred CCcccCHHHHHHHHhCC---CCeEEEEcC--------ChhhHhhCCCCCccccccccccccCcccccch---HHhhhcCc
Q 008704 268 YSGDLSPKSTLELLRGK---ENAVLIDVR--------HEDLRERDGIPDLRRGARFRYASVYLPEVGGS---VKKLLRGG 333 (557)
Q Consensus 268 ~~g~ISpeea~elL~~~---~~avLIDVR--------s~~Ey~~GHIPGA~gav~~~~~nIPl~eL~~~---l~~ll~n~ 333 (557)
|...|+++++.+++.+. ++++||||| ++.||..||||||+ |+|+.++... ...+++++
T Consensus 6 ~~~~is~~~l~~~l~~~~~~~~~~liDvR~~~~~~~~~~~ey~~gHIpGAi--------~ip~~~l~~~~~~~~~~lp~~ 77 (296)
T 1rhs_A 6 YRALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEYLERHVPGAS--------FFDIEECRDKASPYEVMLPSE 77 (296)
T ss_dssp CCSEECHHHHHHHHHTTCCBTTEEEEECCCCCTTSCCHHHHHHHSBCTTCE--------ECCTTTSSCTTSSSSSCCCCH
T ss_pred cCceeeHHHHHHHHhccccCCCeEEEEecccCcCCcchhhhHhhCcCCCCE--------EeCHHHhcCCCCCCCCCCCCH
Confidence 45679999999999642 579999999 68999999999998 7887665432 23456666
Q ss_pred hhhhhHHHHHHHhhhcccCCCCeEEEEeCC--CcH-HHHHHHHHHHccCCcEEEecccHHHHHHcCCceeccC
Q 008704 334 RELDDTLTAAVIRNLKIVQDRSKVIVMDAD--GTR-SKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELK 403 (557)
Q Consensus 334 ~~L~~ll~alGI~~LK~~~kd~~VVVyC~s--G~R-S~~AA~~L~~lGy~nV~vLdGG~~aWkaaGLPV~~~~ 403 (557)
+.+++.+..+|+ +++++||+||++ |.+ +.++++.|+.+||++|++|+||+.+|+++|+|++...
T Consensus 78 ~~~~~~l~~lgi------~~~~~vVvyc~~~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~ 144 (296)
T 1rhs_A 78 AGFADYVGSLGI------SNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEP 144 (296)
T ss_dssp HHHHHHHHHTTC------CTTCEEEEECCCSSSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCSC
T ss_pred HHHHHHHHHcCC------CCCCeEEEEcCCCCCcchHHHHHHHHHHcCCCcEEEcCCCHHHHHHcCCccccCC
Confidence 778887877777 689999999999 876 8899999999999999999999999999999998753
No 32
>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1
Probab=99.74 E-value=6.9e-19 Score=162.14 Aligned_cols=108 Identities=21% Similarity=0.349 Sum_probs=90.0
Q ss_pred cccCHHHHHHHHhCCCCeEEEEcCChhhHhhCCCCCccccccccccccCcccccchHHhhhcCchhhhhHHHHHHHhhhc
Q 008704 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 349 (557)
Q Consensus 270 g~ISpeea~elL~~~~~avLIDVRs~~Ey~~GHIPGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~L~~ll~alGI~~LK 349 (557)
..|+++++.++++ +++++|||||+++||..||||||+ |+|+.++...+..++.
T Consensus 28 ~~Is~~el~~~l~-~~~~~lIDvR~~~ey~~ghIpgAi--------nip~~~l~~~~~~l~~------------------ 80 (152)
T 1t3k_A 28 SYITSTQLLPLHR-RPNIAIIDVRDEERNYDGHIAGSL--------HYASGSFDDKISHLVQ------------------ 80 (152)
T ss_dssp EEECTTTTTTCCC-CTTEEEEEESCSHHHHSSCCCSSE--------EECCSSSSTTHHHHHH------------------
T ss_pred ceECHHHHHHHhc-CCCEEEEECCChhhccCccCCCCE--------ECCHHHHHHHHHHHHH------------------
Confidence 4789999988874 468999999999999999999998 8998777654433221
Q ss_pred ccCCCCeEEEEeC-CCcHHHHHHHHHHH--------ccCCcEEEecccHHHHHHcCCceeccCC
Q 008704 350 IVQDRSKVIVMDA-DGTRSKGIARSLRK--------LGVMRAFLVQGGFQSWVKEGLRIKELKS 404 (557)
Q Consensus 350 ~~~kd~~VVVyC~-sG~RS~~AA~~L~~--------lGy~nV~vLdGG~~aWkaaGLPV~~~~~ 404 (557)
..+++++||+||+ +|.|+..++..|.+ +||++|++|+|||.+|+++|+|++...+
T Consensus 81 ~~~~~~~iVvyC~~~G~rs~~aa~~L~~~l~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~ 144 (152)
T 1t3k_A 81 NVKDKDTLVFHSALSQVRGPTCARRLVNYLDEKKEDTGIKNIMILERGFNGWEASGKPVCRCAE 144 (152)
T ss_dssp TCCSCCEEEESSSCCSSSHHHHHHHHHHHHHHSSSCCCSSEEEEESSTTHHHHHHSCSSCCCSC
T ss_pred hcCCCCEEEEEcCCCCcchHHHHHHHHHHHHHHHHhcCCCcEEEEcCCHHHHHHcCCccccCCC
Confidence 1357889999999 99999999887753 8999999999999999999999987544
No 33
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.74 E-value=2.4e-18 Score=170.56 Aligned_cols=119 Identities=16% Similarity=0.190 Sum_probs=98.0
Q ss_pred ccCHHHHHHHHhCCCCeEEEEcCC-hhhHhhCCCCCccccccccccccCccccc-chHHhhhcCchhhhhHHHHHHHhhh
Q 008704 271 DLSPKSTLELLRGKENAVLIDVRH-EDLRERDGIPDLRRGARFRYASVYLPEVG-GSVKKLLRGGRELDDTLTAAVIRNL 348 (557)
Q Consensus 271 ~ISpeea~elL~~~~~avLIDVRs-~~Ey~~GHIPGA~gav~~~~~nIPl~eL~-~~l~~ll~n~~~L~~ll~alGI~~L 348 (557)
.|+++++.+++. +++.+|||||+ +.||..||||||+ |+|+..+. ......+++++.+++.+..+|+
T Consensus 7 ~is~~~l~~~l~-~~~~~liDvR~~~~ey~~ghIpgA~--------~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi--- 74 (277)
T 3aay_A 7 LVSADWAESNLH-APKVVFVEVDEDTSAYDRDHIAGAI--------KLDWRTDLQDPVKRDFVDAQQFSKLLSERGI--- 74 (277)
T ss_dssp EECHHHHHTTTT-CTTEEEEEEESSSHHHHHCBSTTCE--------EEETTTTTBCSSSSSBCCHHHHHHHHHHHTC---
T ss_pred eEcHHHHHHHhC-CCCEEEEEcCCChhhHhhCCCCCcE--------EecccccccCCCCCCCCCHHHHHHHHHHcCC---
Confidence 589999999885 45799999998 8999999999998 77775421 1122344555667777777777
Q ss_pred cccCCCCeEEEEeCCCc-HHHHHHHHHHHccCCcEEEecccHHHHHHcCCceeccCC
Q 008704 349 KIVQDRSKVIVMDADGT-RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 404 (557)
Q Consensus 349 K~~~kd~~VVVyC~sG~-RS~~AA~~L~~lGy~nV~vLdGG~~aWkaaGLPV~~~~~ 404 (557)
+++++||+||++|. +|.++++.|+.+||++|++|+||+.+|+++|+|++...+
T Consensus 75 ---~~~~~vvvyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 128 (277)
T 3aay_A 75 ---ANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDGRPLSSDPV 128 (277)
T ss_dssp ---CTTSEEEEECSGGGHHHHHHHHHHHHTTCCSEEEETTHHHHHHHTTCCCBCCCC
T ss_pred ---CCCCeEEEECCCCCchHHHHHHHHHHcCCCcEEEecCCHHHHHHcCCccccCCC
Confidence 68999999999986 789999999999999999999999999999999987543
No 34
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.73 E-value=1.6e-18 Score=172.43 Aligned_cols=119 Identities=17% Similarity=0.188 Sum_probs=98.0
Q ss_pred ccCHHHHHHHHhCCCCeEEEEcC-ChhhHhhCCCCCccccccccccccCccc-ccchHHhhhcCchhhhhHHHHHHHhhh
Q 008704 271 DLSPKSTLELLRGKENAVLIDVR-HEDLRERDGIPDLRRGARFRYASVYLPE-VGGSVKKLLRGGRELDDTLTAAVIRNL 348 (557)
Q Consensus 271 ~ISpeea~elL~~~~~avLIDVR-s~~Ey~~GHIPGA~gav~~~~~nIPl~e-L~~~l~~ll~n~~~L~~ll~alGI~~L 348 (557)
.|+++++.+++. +++++||||| ++.||..||||||+ |+|+.. +.......+++++.+.+.+..+|+
T Consensus 9 ~is~~~l~~~l~-~~~~~liDvR~~~~e~~~ghIpgA~--------~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi--- 76 (285)
T 1uar_A 9 LVSTDWVQEHLE-DPKVRVLEVDEDILLYDTGHIPGAQ--------KIDWQRDFWDPVVRDFISEEEFAKLMERLGI--- 76 (285)
T ss_dssp EECHHHHHTTTT-CTTEEEEEECSSTTHHHHCBCTTCE--------EECHHHHHBCSSSSSBCCHHHHHHHHHHTTC---
T ss_pred eEcHHHHHHhcC-CCCEEEEEcCCCcchhhcCcCCCCE--------ECCchhhccCCcccCCCCHHHHHHHHHHcCC---
Confidence 689999999985 4579999999 78999999999998 888753 222222344555567666666666
Q ss_pred cccCCCCeEEEEeCCCc-HHHHHHHHHHHccCCcEEEecccHHHHHHcCCceeccCC
Q 008704 349 KIVQDRSKVIVMDADGT-RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 404 (557)
Q Consensus 349 K~~~kd~~VVVyC~sG~-RS~~AA~~L~~lGy~nV~vLdGG~~aWkaaGLPV~~~~~ 404 (557)
+++++||+||++|. +|.++++.|+.+||++|++|+||+.+|+.+|+|++...+
T Consensus 77 ---~~~~~ivvyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 130 (285)
T 1uar_A 77 ---SNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEEGRPLTTEVP 130 (285)
T ss_dssp ---CTTCEEEEECHHHHHHHHHHHHHHHHTTCSCEEEETTHHHHHHHHTCCCBCCCC
T ss_pred ---CCCCeEEEECCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCcccCCCC
Confidence 68999999999998 799999999999999999999999999999999987433
No 35
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=99.72 E-value=6e-18 Score=149.07 Aligned_cols=109 Identities=20% Similarity=0.310 Sum_probs=78.6
Q ss_pred cccCHHHHHHHHhCCCCeEEEEcCChhhHhhCCCCCccccccccccccCcccccchHH--hhhc--------------Cc
Q 008704 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVK--KLLR--------------GG 333 (557)
Q Consensus 270 g~ISpeea~elL~~~~~avLIDVRs~~Ey~~GHIPGA~gav~~~~~nIPl~eL~~~l~--~ll~--------------n~ 333 (557)
..|+++++.+ .++++|||||++.||..||||||+ |+|+.++..... .+.. ..
T Consensus 5 ~~i~~~el~~----~~~~~iiDvR~~~e~~~ghIpgA~--------nip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (134)
T 3g5j_A 5 SVIKIEKALK----LDKVIFVDVRTEGEYEEDHILNAI--------NMPLFKNNEHNEVGTIYKMQGKHEAIQKGFDYVS 72 (134)
T ss_dssp CEECHHHHTT----CTTEEEEECSCHHHHHHCCCTTCE--------ECCSSCHHHHHHHHHHHHHHCHHHHHHHHHHHHG
T ss_pred cccCHHHHHh----cCCcEEEEcCCHHHHhcCCCCCCE--------EcCccchhhhhcccceeeecChhHHHhccccccc
Confidence 3688888765 468999999999999999999998 899865432100 0000 00
Q ss_pred hhhhhHHHHHHHhhhcccCCC-CeEEEEe-CCCcHHHHHHHHHHHccCCcEEEecccHHHHHHcC
Q 008704 334 RELDDTLTAAVIRNLKIVQDR-SKVIVMD-ADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEG 396 (557)
Q Consensus 334 ~~L~~ll~alGI~~LK~~~kd-~~VVVyC-~sG~RS~~AA~~L~~lGy~nV~vLdGG~~aWkaaG 396 (557)
..+.++...+. .++++ ++||+|| ++|.||..+++.|+.+|| +|++|+|||.+|++..
T Consensus 73 ~~~~~~~~~~~-----~~~~~~~~ivvyC~~~G~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~~ 131 (134)
T 3g5j_A 73 YKLKDIYLQAA-----ELALNYDNIVIYCARGGMRSGSIVNLLSSLGV-NVYQLEGGYKAYRNFV 131 (134)
T ss_dssp GGHHHHHHHHH-----HHHTTCSEEEEECSSSSHHHHHHHHHHHHTTC-CCEEETTHHHHHHHHH
T ss_pred ccHHHHHHHHH-----HhccCCCeEEEEECCCChHHHHHHHHHHHcCC-ceEEEeCcHHHHHHHh
Confidence 01112221111 12567 9999999 689999999999999999 9999999999999753
No 36
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=99.71 E-value=5.2e-18 Score=140.51 Aligned_cols=84 Identities=20% Similarity=0.241 Sum_probs=70.1
Q ss_pred CeEEEEcCChhhHhhCCCCCccccccccccccCcccccchHHhhhcCchhhhhHHHHHHHhhhcccCCCCeEEEEeCCCc
Q 008704 286 NAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKIVQDRSKVIVMDADGT 365 (557)
Q Consensus 286 ~avLIDVRs~~Ey~~GHIPGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~L~~ll~alGI~~LK~~~kd~~VVVyC~sG~ 365 (557)
+++|||||++.||..+|||||+ |+|+.++...+.. ++ .+++++||+||++|.
T Consensus 1 ~~~liDvR~~~e~~~ghIpgA~--------~ip~~~l~~~~~~--------------l~------~~~~~~ivv~C~~g~ 52 (85)
T 2jtq_A 1 AEHWIDVRVPEQYQQEHVQGAI--------NIPLKEVKERIAT--------------AV------PDKNDTVKVYCNAGR 52 (85)
T ss_dssp CEEEEECSCHHHHTTEEETTCE--------ECCHHHHHHHHHH--------------HC------CCTTSEEEEEESSSH
T ss_pred CCEEEECCCHHHHHhCCCCCCE--------EcCHHHHHHHHHH--------------hC------CCCCCcEEEEcCCCc
Confidence 4689999999999999999998 8998765443322 22 267899999999999
Q ss_pred HHHHHHHHHHHccCCcEEEecccHHHHHHcCCceec
Q 008704 366 RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKE 401 (557)
Q Consensus 366 RS~~AA~~L~~lGy~nV~vLdGG~~aWkaaGLPV~~ 401 (557)
||..+++.|+.+||++|+++ |||.+|. .|+++
T Consensus 53 rs~~aa~~L~~~G~~~v~~l-GG~~~w~---~~~~~ 84 (85)
T 2jtq_A 53 QSGQAKEILSEMGYTHVENA-GGLKDIA---MPKVK 84 (85)
T ss_dssp HHHHHHHHHHHTTCSSEEEE-EETTTCC---SCEEE
T ss_pred hHHHHHHHHHHcCCCCEEec-cCHHHHh---ccccc
Confidence 99999999999999999999 9999984 45543
No 37
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.71 E-value=1.9e-17 Score=167.87 Aligned_cols=122 Identities=18% Similarity=0.290 Sum_probs=99.6
Q ss_pred CCcccCHHHHHHHHhCC---CCeEEEEcC---------ChhhHhhCCCCCccccccccccccCccccc---chHHhhhcC
Q 008704 268 YSGDLSPKSTLELLRGK---ENAVLIDVR---------HEDLRERDGIPDLRRGARFRYASVYLPEVG---GSVKKLLRG 332 (557)
Q Consensus 268 ~~g~ISpeea~elL~~~---~~avLIDVR---------s~~Ey~~GHIPGA~gav~~~~~nIPl~eL~---~~l~~ll~n 332 (557)
+...|+++++.+++.+. ++++||||| ++.||..||||||+ |+|+..+. .....++++
T Consensus 20 ~~~lIs~~~l~~~l~~~~~~~~~~ilDvR~~~~~~~~~~~~ey~~gHIpGAi--------~i~~~~~~~~~~~~~~~lp~ 91 (302)
T 3olh_A 20 FQSMVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAA--------FFDIDQCSDRTSPYDHMLPG 91 (302)
T ss_dssp CCCEECHHHHHHHHHCCCSSCCEEEEECCCCCCC--CCHHHHHHHSCCTTCE--------ECCTTTSSCSSCSSSSCCCC
T ss_pred CCCccCHHHHHHHhcCcCCCCCEEEEEeecCCCccCcccHHHHhhCcCCCCe--------EeCHHHhcCcCCCCCCCCCC
Confidence 34569999999999743 379999999 88999999999998 77765442 223345566
Q ss_pred chhhhhHHHHHHHhhhcccCCCCeEEEEeCC---CcHHHHHHHHHHHccCCcEEEecccHHHHHHcCCceeccC
Q 008704 333 GRELDDTLTAAVIRNLKIVQDRSKVIVMDAD---GTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELK 403 (557)
Q Consensus 333 ~~~L~~ll~alGI~~LK~~~kd~~VVVyC~s---G~RS~~AA~~L~~lGy~nV~vLdGG~~aWkaaGLPV~~~~ 403 (557)
++.+++.+..+|+ +++++||+||++ +.+|.++++.|+.+||++|++|+||+.+|+++|+|++...
T Consensus 92 ~~~~~~~~~~lgi------~~~~~VVvyc~~~~g~~~a~ra~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~ 159 (302)
T 3olh_A 92 AEHFAEYAGRLGV------GAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLDGGLRHWLRQNLPLSSGK 159 (302)
T ss_dssp HHHHHHHHHHTTC------CSSCEEEEECCCTTSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHSCCC-CCSC
T ss_pred HHHHHHHHHHcCC------CCCCEEEEEeCCCCCcchHHHHHHHHHHcCCCcEEECCCCHHHHHHcCCCcccCC
Confidence 6778888888887 689999999964 3479999999999999999999999999999999998753
No 38
>2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens}
Probab=99.69 E-value=2.5e-17 Score=146.15 Aligned_cols=121 Identities=17% Similarity=0.224 Sum_probs=80.9
Q ss_pred ccCHHHHHH--------HHhCCCCeEEEEcCChhhHhhCCCCCccccccccccccCcccccchHHhhhcCchhhhhHHHH
Q 008704 271 DLSPKSTLE--------LLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTA 342 (557)
Q Consensus 271 ~ISpeea~e--------lL~~~~~avLIDVRs~~Ey~~GHIPGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~L~~ll~a 342 (557)
.|+++++.+ ++. +++.+|||||++.||..||||||+ |+|+.++..... +...+..+...+..
T Consensus 2 ~Is~~~l~~~l~~~~~~~l~-~~~~~iiDvR~~~e~~~ghIpgA~--------~ip~~~~~~~~~-~~~~~~~~~~~~~~ 71 (142)
T 2ouc_A 2 IIYPNDLAKKMTKCSKSHLP-SQGPVIIDCRPFMEYNKSHIQGAV--------HINCADKISRRR-LQQGKITVLDLISC 71 (142)
T ss_dssp EECHHHHHHHHHC-----------CEEEECSCHHHHHHEEETTCE--------ECCCSSHHHHHH-HHTTSSCHHHHHHT
T ss_pred ccCHHHHHHHHHhcccccCC-CCCCEEEEeCCHHHhhhhhccCcc--------ccCccHHHHHHH-hhcCCcchhhhCCC
Confidence 478999998 443 457899999999999999999998 899876532111 10111111221110
Q ss_pred HHH-hhhcccCCCCeEEEEeCCCcHH---------HHHHHHHHHccCCcEEEecccHHHHHHcCCceeccC
Q 008704 343 AVI-RNLKIVQDRSKVIVMDADGTRS---------KGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELK 403 (557)
Q Consensus 343 lGI-~~LK~~~kd~~VVVyC~sG~RS---------~~AA~~L~~lGy~nV~vLdGG~~aWkaaGLPV~~~~ 403 (557)
.+. ..++.. ++++||+||++|.++ ..++..|...|| +|++|+|||.+|.++|+|+..+.
T Consensus 72 ~~~~~~~~~~-~~~~ivvyc~~g~~~~~~~~~~~~~~~~~~L~~~G~-~v~~l~GG~~~w~~~g~~~~~~~ 140 (142)
T 2ouc_A 72 REGKDSFKRI-FSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQNHENLCDNS 140 (142)
T ss_dssp TSCTTHHHHH-HHSCEEEECSSCCCGGGCCTTSHHHHHHHHHHHTTC-CCEEETTHHHHHTTTCGGGEEEC
T ss_pred hhhhHHHhcc-CCCcEEEEECCCCchhhcCcccHHHHHHHHHHHcCC-cEEEEccCHHHHHHHCHHhhccc
Confidence 000 000000 267899999999875 457788999999 99999999999999999988643
No 39
>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1
Probab=99.69 E-value=2.8e-17 Score=151.12 Aligned_cols=109 Identities=18% Similarity=0.213 Sum_probs=86.8
Q ss_pred cccCHHHHHHHHhCC-----CCeEEEEcCChhhHhhCCCCCccccccccccccCcccccchHHhhhcCchhhhhHHHHHH
Q 008704 270 GDLSPKSTLELLRGK-----ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAV 344 (557)
Q Consensus 270 g~ISpeea~elL~~~-----~~avLIDVRs~~Ey~~GHIPGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~L~~ll~alG 344 (557)
..|+++++.++++++ ++++|||||++.||..||||||+ |+|+.++........ ..
T Consensus 23 ~~is~~el~~~l~~~~~~~~~~~~liDvR~~~e~~~ghIpgAi--------nip~~~~~~~~~~~~---~~--------- 82 (161)
T 1c25_A 23 KYISPEIMASVLNGKFANLIKEFVIIDCRYPYEYEGGHIKGAV--------NLHMEEEVEDFLLKK---PI--------- 82 (161)
T ss_dssp CEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCE--------ECCSHHHHHHHTTTS---CC---------
T ss_pred ceeCHHHHHHHHhccccccCCCeEEEECCChHHccCCcccCcE--------eCChhHHHHHHHhhh---hh---------
Confidence 469999999999643 47899999999999999999998 899876533210000 00
Q ss_pred HhhhcccCCCCeE--EEEeC-CCcHHHHHHHHHHHc----------cCCcEEEecccHHHHHHcCCceeccC
Q 008704 345 IRNLKIVQDRSKV--IVMDA-DGTRSKGIARSLRKL----------GVMRAFLVQGGFQSWVKEGLRIKELK 403 (557)
Q Consensus 345 I~~LK~~~kd~~V--VVyC~-sG~RS~~AA~~L~~l----------Gy~nV~vLdGG~~aWkaaGLPV~~~~ 403 (557)
..++++++ |+||+ +|.||..+++.|+.. ||++|++|+||+.+|.+++.|+..+.
T Consensus 83 -----~~~~~~~ivvv~yC~~sg~rs~~aa~~L~~~~~~~~~l~~~G~~~v~~l~GG~~~W~~~~~~~~~~~ 149 (161)
T 1c25_A 83 -----VPTDGKRVIVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQSYCEPP 149 (161)
T ss_dssp -----CCCTTSEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHHHGGGEESS
T ss_pred -----ccCCCCCeEEEEEcCCCCcchHHHHHHHHHHHHhhhhccccCCceEEEEcCCHHHHHHHcccccCCC
Confidence 01467775 67899 999999999999864 99999999999999999999998753
No 40
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.68 E-value=5.8e-17 Score=176.44 Aligned_cols=200 Identities=14% Similarity=0.165 Sum_probs=135.9
Q ss_pred cchhhhhhhhhHHhh--hhhhccCcceEEEeecccCCCCCccHHHHHhHhhhh---ccceeeeccchHHHHHHHHHHHHH
Q 008704 159 TVAAVDVLRNTIVAL--EESMTNGASFVVYYYGTTKESLPPEIRDALNLYEDR---AVKLWRPVGSALQQVSVAIEGLER 233 (557)
Q Consensus 159 ~~~~~d~l~~~~~~~--~~~~~~~~~~~~~~yG~~~~~lp~~i~~~l~~~e~~---ag~Vl~~~G~a~~q~~~~iE~l~~ 233 (557)
..+..+.+++.+..- +-.+.|.|+--.|.-||++..+.-...++....... .+.-+...|....+...+...+ .
T Consensus 265 ~~is~~~l~~~~~~~~~~~~liDvR~~~ey~~ghIpgAinip~~~l~~~~~~~~~~~~~~ivv~c~~g~rs~~aa~~L-~ 343 (539)
T 1yt8_A 265 ERLDLAGLAQWQDEHDRTTYLLDVRTPEEYEAGHLPGSRSTPGGQLVQETDHVASVRGARLVLVDDDGVRANMSASWL-A 343 (539)
T ss_dssp EEECHHHHHHHHHCTTSCEEEEECSCHHHHHHCBCTTCEECCHHHHHHSHHHHCCSBTCEEEEECSSSSHHHHHHHHH-H
T ss_pred ceECHHHHHHHHhCCCCCeEEEECCCHHHHhcCCCCCCEeCCHHHHHHHHHhhcCCCCCeEEEEeCCCCcHHHHHHHH-H
Confidence 456667777665432 346889998888999999976655455544432221 1122233333333333333332 3
Q ss_pred hcCCCCCCCceehhhhhh-hHHHHHHHHHHHHhcCC----------CcccCHHHHHHHHhCCCCeEEEEcCChhhHhhCC
Q 008704 234 SLGFDPNDPIVPFVVFLG-TSATLWIFYWWWTYGGY----------SGDLSPKSTLELLRGKENAVLIDVRHEDLRERDG 302 (557)
Q Consensus 234 ~lG~~~~~pVv~~~v~vg-~~~~l~~l~~l~~~~g~----------~g~ISpeea~elL~~~~~avLIDVRs~~Ey~~GH 302 (557)
.+|++ +. ++-| +... |...++ ...++++++.+++. +++.+|||||++.||+.||
T Consensus 344 ~~G~~----v~---~l~G~G~~~-------w~~~g~p~~~~~~~~~~~~i~~~~l~~~l~-~~~~~liDvR~~~e~~~gh 408 (539)
T 1yt8_A 344 QMGWQ----VA---VLDGLSEAD-------FSERGAWSAPLPRQPRADTIDPTTLADWLG-EPGTRVLDFTASANYAKRH 408 (539)
T ss_dssp HTTCE----EE---EECSCCGGG-------CCBCSSCCCCCCCCCCCCEECHHHHHHHTT-STTEEEEECSCHHHHHHCB
T ss_pred HcCCe----EE---EecCCChHH-------HHHhhccccCCCCCCcCCccCHHHHHHHhc-CCCeEEEEeCCHHHhhcCc
Confidence 35761 21 1222 2211 111111 24689999999985 4579999999999999999
Q ss_pred CCCccccccccccccCcccccchHHhhhcCchhhhhHHHHHHHhhhcccCCCCeEEEEeCCCcHHHHHHHHHHHccCCcE
Q 008704 303 IPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRA 382 (557)
Q Consensus 303 IPGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~L~~ll~alGI~~LK~~~kd~~VVVyC~sG~RS~~AA~~L~~lGy~nV 382 (557)
||||+ ++|+.++...+.. ++++++||+||++|.||..++..|+.+||++|
T Consensus 409 IpgA~--------~ip~~~l~~~l~~----------------------l~~~~~ivv~C~sG~rs~~aa~~L~~~G~~~v 458 (539)
T 1yt8_A 409 IPGAA--------WVLRSQLKQALER----------------------LGTAERYVLTCGSSLLARFAVAEVQALSGKPV 458 (539)
T ss_dssp CTTCE--------ECCGGGHHHHHHH----------------------HCCCSEEEEECSSSHHHHHHHHHHHHHHCSCE
T ss_pred CCCch--------hCCHHHHHHHHHh----------------------CCCCCeEEEEeCCChHHHHHHHHHHHcCCCCE
Confidence 99998 8888665443221 26889999999999999999999999999999
Q ss_pred EEecccHHHHHHcCCceeccCC
Q 008704 383 FLVQGGFQSWVKEGLRIKELKS 404 (557)
Q Consensus 383 ~vLdGG~~aWkaaGLPV~~~~~ 404 (557)
++|+|||.+|.++|+|++++.+
T Consensus 459 ~~l~GG~~~W~~~g~pv~~~~~ 480 (539)
T 1yt8_A 459 FLLDGGTSAWVAAGLPTEDGES 480 (539)
T ss_dssp EEETTHHHHHHHTTCCCBCSSC
T ss_pred EEeCCcHHHHHhCCCCcccCCC
Confidence 9999999999999999998644
No 41
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.67 E-value=2.2e-17 Score=172.89 Aligned_cols=116 Identities=19% Similarity=0.227 Sum_probs=97.1
Q ss_pred cccCHHHHHHHHhCCCCeEEEEcCC--------hhhHhhCCCCCccccccccccccCccc-ccch-----HHhhhcCchh
Q 008704 270 GDLSPKSTLELLRGKENAVLIDVRH--------EDLRERDGIPDLRRGARFRYASVYLPE-VGGS-----VKKLLRGGRE 335 (557)
Q Consensus 270 g~ISpeea~elL~~~~~avLIDVRs--------~~Ey~~GHIPGA~gav~~~~~nIPl~e-L~~~-----l~~ll~n~~~ 335 (557)
..|+++++.+++.+ ++|||||+ +.||..||||||+ |+|+.. +... ...++++++.
T Consensus 14 ~~Is~~el~~~l~~---~~iIDvR~~~~~~~~~~~ey~~gHIpGAi--------~ip~~~~l~~~~~~~~~~~~lp~~~~ 82 (373)
T 1okg_A 14 VFLDPSEVADHLAE---YRIVDCRYSLKIKDHGSIQYAKEHVKSAI--------RADVDTNLSKLVPTSTARHPLPPXAE 82 (373)
T ss_dssp CEECHHHHTTCGGG---SEEEECCCCSSSTTTTTTHHHHCEETTCE--------ECCTTTTSCCCCTTCCCSSCCCCHHH
T ss_pred cEEcHHHHHHHcCC---cEEEEecCCccccccchhHHhhCcCCCCE--------EeCchhhhhcccccCCccccCCCHHH
Confidence 46999999998852 89999998 6999999999998 788764 5432 2345566667
Q ss_pred hhhHHHHHHHhhhcccCCCCeEEEEe-CCCcHHH-HHHHHHHHccCCcEEEecccHHHHHHcCCceeccC
Q 008704 336 LDDTLTAAVIRNLKIVQDRSKVIVMD-ADGTRSK-GIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELK 403 (557)
Q Consensus 336 L~~ll~alGI~~LK~~~kd~~VVVyC-~sG~RS~-~AA~~L~~lGy~nV~vLdGG~~aWkaaGLPV~~~~ 403 (557)
+.+.+..+|+ +++++||+|| ++|.|+. ++++.|+.+|| +|++|+||+.+|+++|+|++...
T Consensus 83 f~~~l~~~gi------~~d~~VVvYc~~~G~rsa~ra~~~L~~~G~-~V~~L~GG~~aW~~~g~pv~~~~ 145 (373)
T 1okg_A 83 FIDWCMANGM------AGELPVLCYDDECGAMGGCRLWWMLNSLGA-DAYVINGGFQACKAAGLEMESGE 145 (373)
T ss_dssp HHHHHHHTTC------SSSSCEEEECSSTTTTTHHHHHHHHHHHTC-CEEEETTTTHHHHTTTCCEECSC
T ss_pred HHHHHHHcCC------CCCCeEEEEeCCCCchHHHHHHHHHHHcCC-eEEEeCCCHHHHHhhcCCcccCC
Confidence 7777777777 6899999999 7888886 99999999999 99999999999999999998753
No 42
>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A
Probab=99.67 E-value=4.6e-17 Score=148.28 Aligned_cols=123 Identities=18% Similarity=0.208 Sum_probs=85.5
Q ss_pred cccCHHHHHHHHhC-CCCeEEEEcCChhhHhhCCCCCccccccccccccCccccc-chHHhhhcCchhhhhHHHHHHHhh
Q 008704 270 GDLSPKSTLELLRG-KENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVG-GSVKKLLRGGRELDDTLTAAVIRN 347 (557)
Q Consensus 270 g~ISpeea~elL~~-~~~avLIDVRs~~Ey~~GHIPGA~gav~~~~~nIPl~eL~-~~l~~ll~n~~~L~~ll~alGI~~ 347 (557)
..|+++++.+++++ +++++|||||++.||..||||||+ |+|+.++. .... .+...+..++.......
T Consensus 4 ~~Is~~~l~~~l~~~~~~~~iiDvR~~~ey~~gHIpgAi--------nip~~~l~~~~~~---~~~~~~~~ll~~~~~~~ 72 (153)
T 2vsw_A 4 TQIVTERLVALLESGTEKVLLIDSRPFVEYNTSHILEAI--------NINCSKLMKRRLQ---QDKVLITELIQHSAKHK 72 (153)
T ss_dssp EEECHHHHHHHHTSTTCCEEEEECSCHHHHHHCEETTCE--------ECCCCHHHHHHHH---TTSSCHHHHHHHSCSSC
T ss_pred ccccHHHHHHHHhcCCCCEEEEECCCHHHhccCccCCCe--------eeChHHHHHhhhh---cCCcCHHHhcCchhhhh
Confidence 47999999999963 357999999999999999999998 89987652 2111 00000111110000000
Q ss_pred hcccCCCCeEEEEeCCCcHHHHH------HHHHHHc--cCCcEEEecccHHHHHHcCCceeccCC
Q 008704 348 LKIVQDRSKVIVMDADGTRSKGI------ARSLRKL--GVMRAFLVQGGFQSWVKEGLRIKELKS 404 (557)
Q Consensus 348 LK~~~kd~~VVVyC~sG~RS~~A------A~~L~~l--Gy~nV~vLdGG~~aWkaaGLPV~~~~~ 404 (557)
+ ..+++++|||||++|.|+..+ ++.|+.+ ||++|++|+|||.+|.+.+.++....+
T Consensus 73 ~-~~~~~~~iVvyc~~g~~s~~a~~~~~~~~~L~~l~~G~~~v~~L~GG~~~W~~~~~~~~~~~~ 136 (153)
T 2vsw_A 73 V-DIDCSQKVVVYDQSSQDVASLSSDCFLTVLLGKLEKSFNSVHLLAGGFAEFSRCFPGLCEGKS 136 (153)
T ss_dssp C-CCCTTSEEEEECSSCCCGGGSCTTSHHHHHHHHHHHHCSCEEEETTHHHHHHHHCGGGEEC--
T ss_pred h-ccCCCCeEEEEeCCCCcccccccchHHHHHHHHHHhCCCcEEEEeChHHHHHHhChhhhcCCC
Confidence 0 136789999999999988665 5777744 999999999999999998777766443
No 43
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.67 E-value=1.2e-16 Score=173.87 Aligned_cols=107 Identities=18% Similarity=0.192 Sum_probs=92.9
Q ss_pred cccCHHHHHHHHhCCCCeEEEEcCChhhHhhCCCCCccccccccccccCcccccchHHhhhcCchhhhhHHHHHHHhhhc
Q 008704 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 349 (557)
Q Consensus 270 g~ISpeea~elL~~~~~avLIDVRs~~Ey~~GHIPGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~L~~ll~alGI~~LK 349 (557)
..|+++++.+++.++++++|||||++.||..||||||+ |+|+.++...+..+.
T Consensus 7 ~~is~~~l~~~l~~~~~~~liDvR~~~e~~~ghIpgAv--------~ip~~~~~~~~~~l~------------------- 59 (539)
T 1yt8_A 7 AVRTFHDIRAALLARRELALLDVREEDPFAQAHPLFAA--------NLPLSRLELEIHARV------------------- 59 (539)
T ss_dssp EEECHHHHHHHHHHTCCBEEEECSCHHHHTTSBCTTCE--------ECCGGGHHHHHHHHS-------------------
T ss_pred cccCHHHHHHHHhCCCCeEEEECCCHHHHhcCcCCCCE--------ECCHHHHHHHHHhhC-------------------
Confidence 46999999999975557999999999999999999998 899877654433322
Q ss_pred ccCCCCeEEEEeCCCcHHHHHHHHHHHccCCcEEEecccHHHHHHcCCceeccCC
Q 008704 350 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 404 (557)
Q Consensus 350 ~~~kd~~VVVyC~sG~RS~~AA~~L~~lGy~nV~vLdGG~~aWkaaGLPV~~~~~ 404 (557)
.+++++|||||++|.+|.++++.|+.+||++|++|+||+.+|+++|+|++.+.+
T Consensus 60 -~~~~~~iVvyc~~g~~s~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~ 113 (539)
T 1yt8_A 60 -PRRDTPITVYDDGEGLAPVAAQRLHDLGYSDVALLDGGLSGWRNAGGELFRDVN 113 (539)
T ss_dssp -CCTTSCEEEECSSSSHHHHHHHHHHHTTCSSEEEETTHHHHHHHTTCCCBCSSS
T ss_pred -CCCCCeEEEEECCCChHHHHHHHHHHcCCCceEEeCCCHHHHHhcCCCcccCCc
Confidence 147899999999999999999999999999999999999999999999987543
No 44
>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}
Probab=99.65 E-value=2e-16 Score=145.30 Aligned_cols=107 Identities=19% Similarity=0.215 Sum_probs=82.4
Q ss_pred cccCHHHHHHHHhCC---CCeEEEEcCChhhHhhCCCCCccccccccccccCcccccc-hHHhhhcCchhhhhHHHHHHH
Q 008704 270 GDLSPKSTLELLRGK---ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGG-SVKKLLRGGRELDDTLTAAVI 345 (557)
Q Consensus 270 g~ISpeea~elL~~~---~~avLIDVRs~~Ey~~GHIPGA~gav~~~~~nIPl~eL~~-~l~~ll~n~~~L~~ll~alGI 345 (557)
..|+++++.+++.++ ++++|||||++ ||..||||||+ |+|+.++.. .+.. +... +.-
T Consensus 5 ~~Is~~el~~~l~~~~~~~~~~lIDvR~~-ey~~gHIpGAi--------nip~~~l~~~~~~~-------l~~~---l~~ 65 (152)
T 2j6p_A 5 TYIKPEELVELLDNPDSLVKAAVIDCRDS-DRDCGFIVNSI--------NMPTISCTEEMYEK-------LAKT---LFE 65 (152)
T ss_dssp EEECHHHHHHHHHSHHHHHTEEEEECCST-TGGGCBCTTCE--------ECCTTTCCHHHHHH-------HHHH---HHH
T ss_pred CccCHHHHHHHHhCCCCCCCEEEEEcCcH-HhCcCcCCCcE--------ECChhHhhHHHHHH-------HHHH---hcc
Confidence 368999999999642 37999999999 99999999998 899876643 1111 1111 110
Q ss_pred hhhcccCCCCeEEEEe-CCCcHHHHHH----HHHHHccC--CcEEEecccHHHHHHcCCceec
Q 008704 346 RNLKIVQDRSKVIVMD-ADGTRSKGIA----RSLRKLGV--MRAFLVQGGFQSWVKEGLRIKE 401 (557)
Q Consensus 346 ~~LK~~~kd~~VVVyC-~sG~RS~~AA----~~L~~lGy--~nV~vLdGG~~aWkaaGLPV~~ 401 (557)
.....||+|| .+|.|+..++ +.|+.+|| ++|++|+|||.+|.++|.++..
T Consensus 66 ------~~~~~vV~yC~~sg~rs~~aa~~~~~~L~~~G~~~~~v~~L~GG~~~W~~~g~~~~~ 122 (152)
T 2j6p_A 66 ------EKKELAVFHCAQSLVRAPKGANRFALAQKKLGYVLPAVYVLRGGWEAFYHMYGDVRP 122 (152)
T ss_dssp ------TTCCEEEEECSSSSSHHHHHHHHHHHHHHHHTCCCSEEEEETTHHHHHHHHHTTTCG
T ss_pred ------cCCCEEEEEcCCCCCccHHHHHHHHHHHHHcCCCCCCEEEEcCcHHHHHHHcCCCCC
Confidence 2334678889 7999998888 77888997 5999999999999999998765
No 45
>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A
Probab=99.65 E-value=1.9e-16 Score=153.11 Aligned_cols=109 Identities=21% Similarity=0.264 Sum_probs=86.7
Q ss_pred cccCHHHHHHHHhCC-----CCeEEEEcCChhhHhhCCCCCccccccccccccCcccccchHHhhhcCchhhhhHHHHHH
Q 008704 270 GDLSPKSTLELLRGK-----ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAV 344 (557)
Q Consensus 270 g~ISpeea~elL~~~-----~~avLIDVRs~~Ey~~GHIPGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~L~~ll~alG 344 (557)
..|+++++.+++.++ ++++|||||++.||..||||||+ |+|+.++.... +.....+
T Consensus 44 ~~Is~~el~~~l~~~~~~~~~~~~lIDvR~~~Ey~~gHIpGAi--------nip~~~l~~~~---~~~~~~l-------- 104 (211)
T 1qb0_A 44 KYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAV--------NLPLERDAESF---LLKSPIA-------- 104 (211)
T ss_dssp CEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCE--------ECCSHHHHHHH---HHTTTCC--------
T ss_pred CeeCHHHHHHHHhcccccCCCCEEEEECCCHHHHccCcCCCCE--------ECCchHHHHHh---hhhhhhc--------
Confidence 479999999999643 37899999999999999999998 89986653321 0000000
Q ss_pred HhhhcccCCCCeE--EEEeC-CCcHHHHHHHHHHH----------ccCCcEEEecccHHHHHHcCCceecc
Q 008704 345 IRNLKIVQDRSKV--IVMDA-DGTRSKGIARSLRK----------LGVMRAFLVQGGFQSWVKEGLRIKEL 402 (557)
Q Consensus 345 I~~LK~~~kd~~V--VVyC~-sG~RS~~AA~~L~~----------lGy~nV~vLdGG~~aWkaaGLPV~~~ 402 (557)
..+++++| |+||+ +|.||..+++.|+. +||++|++|+|||.+|.++|.|+..+
T Consensus 105 -----~~~~d~~ivvVvyC~~sG~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~g~~~~~~ 170 (211)
T 1qb0_A 105 -----PCSLDKRVILIFHCEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNFCEP 170 (211)
T ss_dssp -----CSSTTSEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEES
T ss_pred -----cccCCCCeEEEEECCCCCccHHHHHHHHHhhhhhhhhhhhcCCCeEEEECCHHHHHHHHCccccCC
Confidence 01367787 88999 99999999999986 69999999999999999999998764
No 46
>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A
Probab=99.64 E-value=1.9e-16 Score=147.65 Aligned_cols=109 Identities=20% Similarity=0.287 Sum_probs=83.4
Q ss_pred cccCHHHHHHHHhCC-----CCeEEEEcCChhhHhhCCCCCccccccccccccCcccccchHHhhhcCchhhhhHHHHHH
Q 008704 270 GDLSPKSTLELLRGK-----ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAV 344 (557)
Q Consensus 270 g~ISpeea~elL~~~-----~~avLIDVRs~~Ey~~GHIPGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~L~~ll~alG 344 (557)
..|+++++.+++.++ ++++|||||++.||..||||||+ |+|+.++...... . . .+
T Consensus 24 ~~is~~el~~~l~~~~~~~~~~~~liDvR~~~ey~~ghIpgAi--------nip~~~l~~~~~~--~-~-~~-------- 83 (175)
T 2a2k_A 24 KYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAV--------NLPLERDAESFLL--K-S-PI-------- 83 (175)
T ss_dssp CEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCE--------ECCSHHHHHHHHH--S-S-CC--------
T ss_pred ceeCHHHHHHHHhcccccCCCCEEEEECCCHHHHcCCcCCCcE--------ECChhHHHHHhhh--h-h-hh--------
Confidence 469999999999643 47899999999999999999998 8998765332100 0 0 00
Q ss_pred HhhhcccCCCCeEE--EEeC-CCcHHHHHHHHHHH----------ccCCcEEEecccHHHHHHcCCceecc
Q 008704 345 IRNLKIVQDRSKVI--VMDA-DGTRSKGIARSLRK----------LGVMRAFLVQGGFQSWVKEGLRIKEL 402 (557)
Q Consensus 345 I~~LK~~~kd~~VV--VyC~-sG~RS~~AA~~L~~----------lGy~nV~vLdGG~~aWkaaGLPV~~~ 402 (557)
+ ..+++++|| +||+ +|.||..+++.|+. +||++|++|+||+.+|.++|.|+..+
T Consensus 84 ~----~~~~~~~ivvv~yC~~~g~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~~~~~~~~ 150 (175)
T 2a2k_A 84 A----PCSLDKRVILIFHSEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNFCEP 150 (175)
T ss_dssp C----C----CEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEES
T ss_pred c----cccCCCCeEEEEECCCCCCccHHHHHHHHHhhhhhhhhhhcCCceEEEEcCCHHHHHHHCccccCC
Confidence 0 013677874 4699 99999999999986 49999999999999999999998764
No 47
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.64 E-value=3e-16 Score=162.31 Aligned_cols=163 Identities=17% Similarity=0.162 Sum_probs=112.9
Q ss_pred HHHHHHHHhcCCCCCCCceehhhhhhhHHHHHHHHHHHHhcCCC--------------------c---------------
Q 008704 226 VAIEGLERSLGFDPNDPIVPFVVFLGTSATLWIFYWWWTYGGYS--------------------G--------------- 270 (557)
Q Consensus 226 ~~iE~l~~~lG~~~~~pVv~~~v~vg~~~~l~~l~~l~~~~g~~--------------------g--------------- 270 (557)
..|+.+.+.+||.++++||+|.-.-+..+ ..+||++++-|+. +
T Consensus 99 ~~f~~~l~~lGI~~d~~VVvYD~~~~~~A--aR~wW~Lr~~Gh~~V~vLdGg~aW~~~g~p~~~~~~~~~~p~p~~~~~~ 176 (327)
T 3utn_X 99 KVFDDAMSNLGVQKDDILVVYDRVGNFSS--PRCAWTLGVMGHPKVYLLNNFNQYREFKYPLDSSKVAAFSPYPKSHYES 176 (327)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECSSSSSSH--HHHHHHHHHTTCSEEEEESCHHHHHHTTCCCBCCCCSCSCSSCCCCCCC
T ss_pred HHHHHHHHHcCCCCCCEEEEEeCCCCcHH--HHHHHHHHHcCCCceeecccHHHHHHhCCCcccCCccCcCCcCCccccc
Confidence 34778888899999999986533222211 2356765543221 0
Q ss_pred --------ccCHHHHHHHHhCC---CCeEEEEcCChhhHh-----------hCCCCCccccccccccccCcccccchHHh
Q 008704 271 --------DLSPKSTLELLRGK---ENAVLIDVRHEDLRE-----------RDGIPDLRRGARFRYASVYLPEVGGSVKK 328 (557)
Q Consensus 271 --------~ISpeea~elL~~~---~~avLIDVRs~~Ey~-----------~GHIPGA~gav~~~~~nIPl~eL~~~l~~ 328 (557)
.++.+++.+.++++ ++.+|||+|++++|. .||||||+ |+|+.++......
T Consensus 177 ~~~~~~~~v~~~~~v~~~v~~~~~~~~~~lvDaRs~~rf~G~~~ep~~~~r~GHIPGA~--------nlP~~~~ld~~~~ 248 (327)
T 3utn_X 177 SESFQDKEIVDYEEMFQLVKSGELAKKFNAFDARSLGRFEGTEPEPRSDIPSGHIPGTQ--------PLPYGSLLDPETK 248 (327)
T ss_dssp SCCCHHHHEECHHHHHHHHHTTCHHHHCEEEECSCHHHHHTSSCCSSSSCCCCBCTTEE--------ECCGGGGSCTTTC
T ss_pred ccccCchheecHHHHhhhhhcccccccceeeccCccceecccccCccccccCCCCCCCc--------ccChhhccCCCCC
Confidence 13456777777543 247899999999995 48999999 8998777654443
Q ss_pred hhcC-chhhhhHHHHHHHhhhcccCCCCeEEEEeCCCcHHHHHHHHHHHccCCcEEEecccHHHHHHcCCc
Q 008704 329 LLRG-GRELDDTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLR 398 (557)
Q Consensus 329 ll~n-~~~L~~ll~alGI~~LK~~~kd~~VVVyC~sG~RS~~AA~~L~~lGy~nV~vLdGG~~aWkaaGLP 398 (557)
.+++ .+.+...+.++.......++++++||+||.+|.+|+..+..|+.+||++|++|+|+|.+|....-|
T Consensus 249 ~~~~~~e~l~~~l~~~~~~~~~gid~~k~vI~yCgsGvtA~~~~laL~~lG~~~v~lYdGSWsEW~~r~~p 319 (327)
T 3utn_X 249 TYPEAGEAIHATLEKALKDFHCTLDPSKPTICSCGTGVSGVIIKTALELAGVPNVRLYDGSWTEWVLKSGP 319 (327)
T ss_dssp CCCCTTHHHHHHHHHHHHHTTCCCCTTSCEEEECSSSHHHHHHHHHHHHTTCCSEEEESSHHHHHHHHHCG
T ss_pred CCCCcHHHHHHHHHHHHHHhhcCCCCCCCEEEECChHHHHHHHHHHHHHcCCCCceeCCCcHHHhccccCC
Confidence 3332 234444444431111112468899999999999999999999999999999999999999875544
No 48
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.64 E-value=2.1e-16 Score=166.93 Aligned_cols=123 Identities=16% Similarity=0.186 Sum_probs=94.6
Q ss_pred cCHHHHHHHHhCCCCeEEEEcCChhhH-----------hhCCCCCcccccccccc--ccCcccccchHHhhhcCchhhhh
Q 008704 272 LSPKSTLELLRGKENAVLIDVRHEDLR-----------ERDGIPDLRRGARFRYA--SVYLPEVGGSVKKLLRGGRELDD 338 (557)
Q Consensus 272 ISpeea~elL~~~~~avLIDVRs~~Ey-----------~~GHIPGA~gav~~~~~--nIPl~eL~~~l~~ll~n~~~L~~ 338 (557)
|+++++.+++. .++.+|||||++.|| +.||||||+ ++++. ++|+.++.... ..+++++++.+
T Consensus 274 i~~~e~~~~l~-~~~~~liDvR~~~e~~G~~~~~~~~~~~GhIpgAi---~ip~~~~~~~~~~~~~~~-~~~~~~~~l~~ 348 (423)
T 2wlr_A 274 LDMEQARGLLH-RQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGAR---WGHAGSDSTHMEDFHNPD-GTMRSADDITA 348 (423)
T ss_dssp ECHHHHHTTTT-CSSEEEEECSCHHHHHTSCCSSTTCCCCSEETTCE---ECCCCSSTTCCGGGBCTT-SSBCCHHHHHH
T ss_pred ecHHHHHHHhc-CCCceEEecCchhheeeeccCCCCCCcCCCCCCcc---ccccccccccHHHHcCCC-CcCCCHHHHHH
Confidence 67889888875 467899999999999 899999997 11111 23333333221 22444556666
Q ss_pred HHHHHHHhhhcccCCCCeEEEEeCCCcHHHHHHHHHHHccCCcEEEecccHHHHHH-cCCceeccCCc
Q 008704 339 TLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVK-EGLRIKELKSE 405 (557)
Q Consensus 339 ll~alGI~~LK~~~kd~~VVVyC~sG~RS~~AA~~L~~lGy~nV~vLdGG~~aWka-aGLPV~~~~~~ 405 (557)
.+.+.++ +++++||+||++|.||..++..|+.+||++|++|+|||.+|.+ .|+|++++.+.
T Consensus 349 ~~~~~~~------~~~~~ivvyC~sG~rs~~aa~~L~~~G~~~v~~~~GG~~~W~~~~~~Pv~~~~~~ 410 (423)
T 2wlr_A 349 MWKAWNI------KPEQQVSFYCGTGWRASETFMYARAMGWKNVSVYDGGWYEWSSDPKNPVATGERG 410 (423)
T ss_dssp HHHTTTC------CTTSEEEEECSSSHHHHHHHHHHHHTTCSSEEEESSHHHHHTTSTTSCEECSSCC
T ss_pred HHHHcCC------CCCCcEEEECCcHHHHHHHHHHHHHcCCCCcceeCccHHHHhcCCCCCcccCCCC
Confidence 5544444 6899999999999999999999999999999999999999998 99999986553
No 49
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.63 E-value=5e-16 Score=150.57 Aligned_cols=97 Identities=27% Similarity=0.330 Sum_probs=80.4
Q ss_pred cCHHHHHHHHhCCCCeEEEEcCChhhHhh----------CCCCCccccccccccccCcccccchHHhhhcCchhhhhHHH
Q 008704 272 LSPKSTLELLRGKENAVLIDVRHEDLRER----------DGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLT 341 (557)
Q Consensus 272 ISpeea~elL~~~~~avLIDVRs~~Ey~~----------GHIPGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~L~~ll~ 341 (557)
++++++.+ +.+|||+|++.||.. ||||||+ |+|+.++.... +++.
T Consensus 123 i~~~e~~~------~~~liDvR~~~e~~~~~~~~~~~~~ghIpgA~--------~ip~~~~~~~~-----------e~~~ 177 (230)
T 2eg4_A 123 LTADEAAR------HPLLLDVRSPEEFQGKVHPPCCPRGGRIPGSK--------NAPLELFLSPE-----------GLLE 177 (230)
T ss_dssp CCHHHHHT------CSCEEECSCHHHHTTSCCCTTSSSCCBCTTCE--------ECCGGGGGCCT-----------THHH
T ss_pred eCHHHHhh------CCeEEeCCCHHHcCcccCCCCCccCCCCCCcE--------EcCHHHhCChH-----------HHHH
Confidence 55555543 578999999999999 9999998 89987764320 1233
Q ss_pred HHHHhhhcccCCCCeEEEEeCCCcHHHHHHHHHHHccCCcEEEecccHHHHHHcCCcee
Q 008704 342 AAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIK 400 (557)
Q Consensus 342 alGI~~LK~~~kd~~VVVyC~sG~RS~~AA~~L~~lGy~nV~vLdGG~~aWkaaGLPV~ 400 (557)
+.++ +++++||+||++|.||..++..|+.+| .+|++|+|||.+|.+.|+|++
T Consensus 178 ~~~~------~~~~~iv~~C~~G~rs~~a~~~L~~~G-~~v~~~~Gg~~~W~~~g~p~~ 229 (230)
T 2eg4_A 178 RLGL------QPGQEVGVYCHSGARSAVAFFVLRSLG-VRARNYLGSMHEWLQEGLPTE 229 (230)
T ss_dssp HHTC------CTTCEEEEECSSSHHHHHHHHHHHHTT-CEEEECSSHHHHHHHTTCCCB
T ss_pred hcCC------CCCCCEEEEcCChHHHHHHHHHHHHcC-CCcEEecCcHHHHhhcCCCCC
Confidence 3333 689999999999999999999999999 899999999999999999986
No 50
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*
Probab=99.61 E-value=6.2e-16 Score=145.30 Aligned_cols=115 Identities=19% Similarity=0.156 Sum_probs=83.8
Q ss_pred cccCHHHHHHHHhCCC------CeEEEEcCChhhHhhCCCCCccccccccccccCcccccchHHhhhcCchhhhhHHHHH
Q 008704 270 GDLSPKSTLELLRGKE------NAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAA 343 (557)
Q Consensus 270 g~ISpeea~elL~~~~------~avLIDVRs~~Ey~~GHIPGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~L~~ll~al 343 (557)
..|+++++.+++.+++ +++|||||+ .||..||||||+ |+|+.++......+ .++...+...
T Consensus 31 ~~Is~~eL~~~l~~~~~~~~~~~~~iIDVR~-~Ey~~GHIpGAi--------niP~~~l~~~~~~l----~~l~~~~~~~ 97 (169)
T 3f4a_A 31 KYLDPTELHRWMQEGHTTTLREPFQVVDVRG-SDYMGGHIKDGW--------HYAYSRLKQDPEYL----RELKHRLLEK 97 (169)
T ss_dssp EEECHHHHHHHHHHTSCTTTCCCEEEEECCS-TTCTTCEETTCE--------ECCHHHHHHCHHHH----HHHHHHHHHH
T ss_pred cEeCHHHHHHHHhcCCccCcCCCEEEEECCc-hHHccCcCCCCE--------ECCHHHhhcccccH----HHHHHHHHhh
Confidence 4799999999997442 599999999 899999999999 89987765431100 1111112222
Q ss_pred HHhhhcccCCCCeEEEEeCCC-cHHHHHHHHHHH----cc--CCcEEEecccHHHHHHcCCceec
Q 008704 344 VIRNLKIVQDRSKVIVMDADG-TRSKGIARSLRK----LG--VMRAFLVQGGFQSWVKEGLRIKE 401 (557)
Q Consensus 344 GI~~LK~~~kd~~VVVyC~sG-~RS~~AA~~L~~----lG--y~nV~vLdGG~~aWkaaGLPV~~ 401 (557)
++. ...+++|||||.+| .|+..++..|.+ .| +.+|++|+|||.+|++++.|...
T Consensus 98 ~~~----~~~~~~IVvyC~sG~~Rs~~aa~~l~~~L~~~G~~~~~V~~L~GG~~aW~~~~~~~~~ 158 (169)
T 3f4a_A 98 QAD----GRGALNVIFHCMLSQQRGPSAAMLLLRSLDTAELSRCRLWVLRGGFSRWQSVYGDDES 158 (169)
T ss_dssp HHT----SSSCEEEEEECSSSSSHHHHHHHHHHHTCCHHHHTTEEEEEETTHHHHHHHHHTTCTT
T ss_pred ccc----ccCCCeEEEEeCCCCCcHHHHHHHHHHHHHHcCCCCCCEEEECCCHHHHHHHcCCccc
Confidence 331 11247999999997 799888876654 36 57999999999999999887654
No 51
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=99.60 E-value=1.1e-15 Score=153.93 Aligned_cols=103 Identities=14% Similarity=0.227 Sum_probs=85.5
Q ss_pred cccCHHHHHHHHhCCCCeEEEEcCChhhHhhCCCCCccccccccccccCcccccchHHhhhcCchhhhhHHHHHHHhhhc
Q 008704 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 349 (557)
Q Consensus 270 g~ISpeea~elL~~~~~avLIDVRs~~Ey~~GHIPGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~L~~ll~alGI~~LK 349 (557)
..|+++++.+++. +++++|||||++.||..||||||+ |+|+..+.+....+. . .+.
T Consensus 122 ~~Is~~el~~ll~-~~~~vlIDVR~~~Ey~~GHIpGAi--------niP~~~~~~~~~~l~-------~---~l~----- 177 (265)
T 4f67_A 122 TYLSPEEWHQFIQ-DPNVILLDTRNDYEYELGTFKNAI--------NPDIENFREFPDYVQ-------R---NLI----- 177 (265)
T ss_dssp CEECHHHHHHHTT-CTTSEEEECSCHHHHHHEEETTCB--------CCCCSSGGGHHHHHH-------H---HTG-----
T ss_pred ceECHHHHHHHhc-CCCeEEEEeCCchHhhcCcCCCCE--------eCCHHHHHhhHHHHH-------H---hhh-----
Confidence 4689999999995 568999999999999999999998 899877654322110 0 011
Q ss_pred ccCCCCeEEEEeCCCcHHHHHHHHHHHccCCcEEEecccHHHHHHcCC
Q 008704 350 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGL 397 (557)
Q Consensus 350 ~~~kd~~VVVyC~sG~RS~~AA~~L~~lGy~nV~vLdGG~~aWkaaGL 397 (557)
.+++++||+||.+|.||..+++.|+.+||++|++|+||+.+|.+..-
T Consensus 178 -~~kdk~IVvyC~~G~RS~~Aa~~L~~~Gf~nV~~L~GGi~aW~~~~~ 224 (265)
T 4f67_A 178 -DKKDKKIAMFCTGGIRCEKTTAYMKELGFEHVYQLHDGILNYLESIP 224 (265)
T ss_dssp -GGTTSCEEEECSSSHHHHHHHHHHHHHTCSSEEEETTHHHHHHHHSC
T ss_pred -hCCCCeEEEEeCCChHHHHHHHHHHHcCCCCEEEecCHHHHHHHhcC
Confidence 25789999999999999999999999999999999999999998643
No 52
>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1
Probab=99.58 E-value=4.8e-16 Score=141.24 Aligned_cols=111 Identities=25% Similarity=0.371 Sum_probs=79.8
Q ss_pred cccCHHHHHHHHhCC-CCeEEEEcCChhhHhhCCCCCccccccccccccCccccc------c--hHHhhhcCchhhhhHH
Q 008704 270 GDLSPKSTLELLRGK-ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVG------G--SVKKLLRGGRELDDTL 340 (557)
Q Consensus 270 g~ISpeea~elL~~~-~~avLIDVRs~~Ey~~GHIPGA~gav~~~~~nIPl~eL~------~--~l~~ll~n~~~L~~ll 340 (557)
..|+++++.+++.+. ++++|||||++.||..||||||+ |+|+..+. . .+..+++++.. .+.+
T Consensus 16 ~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHIpgAi--------nip~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~ 86 (154)
T 1hzm_A 16 ISKTVAWLNEQLELGNERLLLMDCRPQELYESSHIESAI--------NVAIPGIMLRRLQKGNLPVRALFTRGED-RDRF 86 (154)
T ss_dssp SBSCCCCHHHHHHHCSSSCEEECCSTTHHHHHHTSSSCC--------CCCCSSHHHHTBCCSCCCTTTTSTTSHH-HHHH
T ss_pred cccCHHHHHHHHhCCCCCEEEEEcCCHHHHhhccccCce--------EeCccHHHHhhhhcCcccHHHhCCCHHH-HHHH
Confidence 468999999988642 37899999999999999999998 88876542 1 11122322211 1112
Q ss_pred HHHHHhhhcccCCCCeEEEEeCCCcHH-------HHHHHHHHHc---cCCcEEEecccHHHHHHcCCce
Q 008704 341 TAAVIRNLKIVQDRSKVIVMDADGTRS-------KGIARSLRKL---GVMRAFLVQGGFQSWVKEGLRI 399 (557)
Q Consensus 341 ~alGI~~LK~~~kd~~VVVyC~sG~RS-------~~AA~~L~~l---Gy~nV~vLdGG~~aWkaaGLPV 399 (557)
.+ .+++++||+||++|.++ ..+++.|+.+ ||+ |++|+|||.+|.+. +|.
T Consensus 87 --~~------~~~~~~iVvyc~~g~~~~~~~~aa~~~~~~l~~l~~~G~~-v~~L~GG~~~W~~~-~p~ 145 (154)
T 1hzm_A 87 --TR------RCGTDTVVLYDESSSDWNENTGGESLLGLLLKKLKDEGCR-AFYLEGGFSKFQAE-FSL 145 (154)
T ss_dssp --HH------STTSSCEEECCCSSSSSCSCSSCCSHHHHHHHHHHHTTCC-CEECCCCHHHHHHH-HCS
T ss_pred --hc------cCCCCeEEEEeCCCCccccccccchHHHHHHHHHHHCCCc-eEEEcChHHHHHHH-ChH
Confidence 12 25788999999999865 4556777765 998 99999999999875 553
No 53
>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}
Probab=99.57 E-value=2.2e-15 Score=147.41 Aligned_cols=107 Identities=20% Similarity=0.283 Sum_probs=80.4
Q ss_pred cccCHHHHHHHHhCC-----CCeEEEEcCChhhHhhCCCCCccccccccccccCccc-ccchHHhhhcCchhhhhHHHHH
Q 008704 270 GDLSPKSTLELLRGK-----ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPE-VGGSVKKLLRGGRELDDTLTAA 343 (557)
Q Consensus 270 g~ISpeea~elL~~~-----~~avLIDVRs~~Ey~~GHIPGA~gav~~~~~nIPl~e-L~~~l~~ll~n~~~L~~ll~al 343 (557)
..|+++++.+++.++ ++++|||||++.||..||||||+ |+|+.+ +...+ ... ..+
T Consensus 57 ~~Is~~eL~~~l~~~~~~~~~~~~lIDVR~~~Ey~~GHIpGAi--------nIP~~~~l~~~l---~~~-~~~------- 117 (216)
T 3op3_A 57 KYVNPETVAALLSGKFQGLIEKFYVIDCRYPYEYLGGHIQGAL--------NLYSQEELFNFF---LKK-PIV------- 117 (216)
T ss_dssp EEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTSEETTCE--------ECCSHHHHHHHH---TSS-CCC-------
T ss_pred CEeCHHHHHHHHhCCCccccCCEEEEEeCcHHHHhcCCccCCE--------ECChHHHHHHHH---hhc-ccc-------
Confidence 479999999999643 26899999999999999999999 899864 22111 000 000
Q ss_pred HHhhhcccCCCC--eEEEEeC-CCcHHHHHHHHHHHc----------cCCcEEEecccHHHHHHcCCceec
Q 008704 344 VIRNLKIVQDRS--KVIVMDA-DGTRSKGIARSLRKL----------GVMRAFLVQGGFQSWVKEGLRIKE 401 (557)
Q Consensus 344 GI~~LK~~~kd~--~VVVyC~-sG~RS~~AA~~L~~l----------Gy~nV~vLdGG~~aWkaaGLPV~~ 401 (557)
..++++ .|||||. +|.||..+++.|+.. ||++|++|+|||.+|.+..-.+..
T Consensus 118 ------~~~~~k~~~VVvyC~~SG~Rs~~aa~~L~~~~~~~~~y~~lGf~~V~~L~GG~~aW~~~~~~lce 182 (216)
T 3op3_A 118 ------PLDTQKRIIIVFHCEFSSERGPRMCRCLREEDRSLNQYPALYYPELYILKGGYRDFFPEYMELCE 182 (216)
T ss_dssp ------CSSTTSEEEEEEECCC--CCHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEE
T ss_pred ------ccccCCCCEEEEEeCCCChHHHHHHHHHHHcCcccccccccCCCcEEEECCcHHHHHHhCccccc
Confidence 012344 5999999 999999999999887 899999999999999987555544
No 54
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.57 E-value=5.9e-16 Score=162.09 Aligned_cols=104 Identities=17% Similarity=0.167 Sum_probs=83.1
Q ss_pred CCeEEEEcCChhhHh-----------hCCCCCccccccccccccCccccc--chHHhhhcCchhhhhHHHHH--HHhhhc
Q 008704 285 ENAVLIDVRHEDLRE-----------RDGIPDLRRGARFRYASVYLPEVG--GSVKKLLRGGRELDDTLTAA--VIRNLK 349 (557)
Q Consensus 285 ~~avLIDVRs~~Ey~-----------~GHIPGA~gav~~~~~nIPl~eL~--~~l~~ll~n~~~L~~ll~al--GI~~LK 349 (557)
++.+|||||++.||. .||||||+ |+|+.++. ......+++++++++.+.++ ++
T Consensus 173 ~~~~lIDvR~~~Ef~G~~~~~~~~~~~GhIpGAi--------niP~~~l~~~~~~~~~~~~~~~l~~~~~~~~~gi---- 240 (373)
T 1okg_A 173 PQAIITDARSADRFASTVRPYAADKMPGHIEGAR--------NLPYTSHLVTRGDGKVLRSEEEIRHNIMTVVQGA---- 240 (373)
T ss_dssp TTCCEEECSCHHHHTCCSSCCTTCSSSSCSTTCE--------ECCGGGGEECCSSSCEECCHHHHHHHHHTTCC------
T ss_pred cCceEEeCCCHHHccccccccccCCcCccCCCcE--------EecHHHhhccCCCCCccCCHHHHHHHHHhhhcCC----
Confidence 467899999999999 99999999 89988764 22111144556666666655 55
Q ss_pred ccCC---CCeEEEEeCCCcHHHHHHHHHHHccCCcEEEecccHHHHHH-cCCceecc
Q 008704 350 IVQD---RSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVK-EGLRIKEL 402 (557)
Q Consensus 350 ~~~k---d~~VVVyC~sG~RS~~AA~~L~~lGy~nV~vLdGG~~aWka-aGLPV~~~ 402 (557)
++ +++||+||++|.||..++..|+.+||++|++|+|||.+|.. .|+|+++.
T Consensus 241 --~~~~~d~~ivvyC~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~pv~~~ 295 (373)
T 1okg_A 241 --GDAADLSSFVFSCGSGVTACINIALVHHLGLGHPYLYCGSWSEYSGLFRPPIMRS 295 (373)
T ss_dssp -----CCCTTSEEECSSSSTHHHHHHHHHHTTSCCCEECSSHHHHHHHHTHHHHHHH
T ss_pred --CcccCCCCEEEECCchHHHHHHHHHHHHcCCCCeeEeCChHHHHhcCCCCCcccC
Confidence 46 89999999999999999999999999999999999999997 68998653
No 55
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.56 E-value=3.2e-15 Score=161.01 Aligned_cols=96 Identities=20% Similarity=0.309 Sum_probs=83.0
Q ss_pred CCCcccCHHHHHHHHhCCCCeEEEEcCChhhHhhCCCCCccccccccccccCcccccchHHhhhcCchhhhhHHHHHHHh
Q 008704 267 GYSGDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIR 346 (557)
Q Consensus 267 g~~g~ISpeea~elL~~~~~avLIDVRs~~Ey~~GHIPGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~L~~ll~alGI~ 346 (557)
+....|+++++.++ +++.+|||||++.||+.+|||||+ |+|+.++...+.
T Consensus 470 ~~~~~i~~~~~~~~---~~~~~~iDvR~~~e~~~~~i~ga~--------~ip~~~l~~~~~------------------- 519 (565)
T 3ntd_A 470 GDATPIHFDQIDNL---SEDQLLLDVRNPGELQNGGLEGAV--------NIPVDELRDRMH------------------- 519 (565)
T ss_dssp TSCCEECTTTTTSC---CTTEEEEECSCGGGGGGCCCTTCE--------ECCGGGTTTSGG-------------------
T ss_pred cccceeeHHHHHhC---CCCcEEEEeCCHHHHhcCCCCCcE--------ECCHHHHHHHHh-------------------
Confidence 44457888888766 457999999999999999999998 899977755432
Q ss_pred hhcccCCCCeEEEEeCCCcHHHHHHHHHHHccCCcEEEecccHHHHHHcC
Q 008704 347 NLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEG 396 (557)
Q Consensus 347 ~LK~~~kd~~VVVyC~sG~RS~~AA~~L~~lGy~nV~vLdGG~~aWkaaG 396 (557)
.++++++||+||++|.||..+++.|+++|| +|++|+|||.+|+++|
T Consensus 520 ---~~~~~~~iv~~c~~g~rs~~a~~~l~~~G~-~v~~l~gG~~~w~~~g 565 (565)
T 3ntd_A 520 ---ELPKDKEIIIFSQVGLRGNVAYRQLVNNGY-RARNLIGGYRTYKFAS 565 (565)
T ss_dssp ---GSCTTSEEEEECSSSHHHHHHHHHHHHTTC-CEEEETTHHHHHHHTC
T ss_pred ---hcCCcCeEEEEeCCchHHHHHHHHHHHcCC-CEEEEcChHHHHHhCc
Confidence 136889999999999999999999999999 9999999999999876
No 56
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.53 E-value=1.1e-14 Score=150.64 Aligned_cols=121 Identities=17% Similarity=0.249 Sum_probs=97.8
Q ss_pred cccCHHHHHHHHhCC--CCeEEEEcC--------C-hhhH-hhCCCCCccccccccccccCcccccchHHhhhcCchhhh
Q 008704 270 GDLSPKSTLELLRGK--ENAVLIDVR--------H-EDLR-ERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELD 337 (557)
Q Consensus 270 g~ISpeea~elL~~~--~~avLIDVR--------s-~~Ey-~~GHIPGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~L~ 337 (557)
..|||+++.++++.. ..+++||++ . ..|| +++|||||+ ++++..+ .+.......++++++.++
T Consensus 28 ~LIsp~~l~~ll~~~~~~rvv~lDasw~lP~~~r~~~~E~~~~~HIPGAv---~~Dld~~--~d~~~~~ph~LP~~~~f~ 102 (327)
T 3utn_X 28 DLISPKAFVKLVASEKVHRIVPVDATWYLPSWKLDNKVDFLTKPRIPNSI---FFDIDAI--SDKKSPYPHMFPTKKVFD 102 (327)
T ss_dssp EEECHHHHHHHHHHCSSSCEEEEECCCCCGGGCCCHHHHHHHSCBCTTCE---ECCTTTS--SCTTSSSTTCCCCHHHHH
T ss_pred cccCHHHHHHHHhCCCCCcEEEEEecCCCCCCCCCHHHHHHhhCcCCCCe---eeChHHh--cCCCCCCCCCCcCHHHHH
Confidence 479999999999643 348899985 2 4577 679999886 3433221 223345667899999999
Q ss_pred hHHHHHHHhhhcccCCCCeEEEEeCCCc-HHHHHHHHHHHccCCcEEEecccHHHHHHcCCceecc
Q 008704 338 DTLTAAVIRNLKIVQDRSKVIVMDADGT-RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKEL 402 (557)
Q Consensus 338 ~ll~alGI~~LK~~~kd~~VVVyC~sG~-RS~~AA~~L~~lGy~nV~vLdGG~~aWkaaGLPV~~~ 402 (557)
+.+.++|| +++++||+|++.|. .|.+++|.|+.+|+++|++|+|| .+|+++|+|++.+
T Consensus 103 ~~l~~lGI------~~d~~VVvYD~~~~~~AaR~wW~Lr~~Gh~~V~vLdGg-~aW~~~g~p~~~~ 161 (327)
T 3utn_X 103 DAMSNLGV------QKDDILVVYDRVGNFSSPRCAWTLGVMGHPKVYLLNNF-NQYREFKYPLDSS 161 (327)
T ss_dssp HHHHHTTC------CTTCEEEEECSSSSSSHHHHHHHHHHTTCSEEEEESCH-HHHHHTTCCCBCC
T ss_pred HHHHHcCC------CCCCEEEEEeCCCCcHHHHHHHHHHHcCCCceeecccH-HHHHHhCCCcccC
Confidence 99999999 58999999998876 78899999999999999999977 8999999999764
No 57
>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}
Probab=99.53 E-value=1.6e-14 Score=133.09 Aligned_cols=107 Identities=17% Similarity=0.247 Sum_probs=78.2
Q ss_pred cccCHHHHHHHHhC-------CCCeEEEEcCChhhHhhCCCCCccccccccccccCcccccch--HH-------hhhcCc
Q 008704 270 GDLSPKSTLELLRG-------KENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGS--VK-------KLLRGG 333 (557)
Q Consensus 270 g~ISpeea~elL~~-------~~~avLIDVRs~~Ey~~GHIPGA~gav~~~~~nIPl~eL~~~--l~-------~ll~n~ 333 (557)
..|+++++.+++.+ +++.+|||||++.||..||||||+ |+|+.++... +. .++...
T Consensus 11 ~~is~~el~~~l~~~~~~~~~~~~~~liDvR~~~e~~~ghI~ga~--------~i~~~~l~~~~~~~~~~~~~~~~~~~~ 82 (158)
T 3tg1_B 11 KIIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGAV--------HINCADKISRRRLQQGKITVLDLISCR 82 (158)
T ss_dssp CEECHHHHHHHHCC----------CEEEECSCHHHHHHCCBTTCE--------ECCCSSHHHHHHHTTSSCCHHHHTCCC
T ss_pred cEecHHHHHHHHHhcccccCCCCCEEEEEcCCHHHHHhCCCCCce--------eechhHHHHHhhhhcCcccHHhhcCCH
Confidence 46999999999963 356899999999999999999998 8888765311 00 011110
Q ss_pred hhhhhHHHHHHHhhhcccCCCCeEEEEeCCC---------cHHHHHHHHHHHccCCcEEEecccHHHHHHc
Q 008704 334 RELDDTLTAAVIRNLKIVQDRSKVIVMDADG---------TRSKGIARSLRKLGVMRAFLVQGGFQSWVKE 395 (557)
Q Consensus 334 ~~L~~ll~alGI~~LK~~~kd~~VVVyC~sG---------~RS~~AA~~L~~lGy~nV~vLdGG~~aWkaa 395 (557)
.. .. .++ ..++++||+||.+| .++..+++.|+..|| +|++|+|||.+|.+.
T Consensus 83 ~~-~~--------~~~-~~~~~~IVvyc~~g~~~~~~~~~~~s~~a~~~L~~~G~-~v~~L~GG~~~W~~~ 142 (158)
T 3tg1_B 83 EG-KD--------SFK-RIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQN 142 (158)
T ss_dssp CS-SC--------SST-TTTTSCEEEECSCCSCTTSCCSSSHHHHHHHHHHTTTC-CEEEETTHHHHHTSS
T ss_pred HH-HH--------HHh-ccCCCeEEEEECCCCcccccCcchHHHHHHHHHHhCCC-cEEEeCCcHHHHHHH
Confidence 00 00 000 12478999999999 468999999999999 799999999999764
No 58
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.51 E-value=9e-15 Score=141.76 Aligned_cols=98 Identities=26% Similarity=0.242 Sum_probs=75.2
Q ss_pred CCCCeEEEEcCChhhHhhCCCCCccccccccccccCcc--cccc-hHHhhhcCchhhhhHHHHHHHhhhcccCCCCeEEE
Q 008704 283 GKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLP--EVGG-SVKKLLRGGRELDDTLTAAVIRNLKIVQDRSKVIV 359 (557)
Q Consensus 283 ~~~~avLIDVRs~~Ey~~GHIPGA~gav~~~~~nIPl~--eL~~-~l~~ll~n~~~L~~ll~alGI~~LK~~~kd~~VVV 359 (557)
++++.+|||+|++.||..||||||+ |+|+. ++.. ....++++++.+++.+..+ +.+++||+
T Consensus 3 ~~~~~~iiDvR~~~ey~~ghIpgAi--------~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~l--------~~~~~ivv 66 (230)
T 2eg4_A 3 LPEDAVLVDTRPRPAYEAGHLPGAR--------HLDLSAPKLRLREEAELKALEGGLTELFQTL--------GLRSPVVL 66 (230)
T ss_dssp CCTTCEEEECSCHHHHHHCBCTTCE--------ECCCCSCCCCCCSHHHHHHHHHHHHHHHHHT--------TCCSSEEE
T ss_pred CCCCEEEEECCChhhHhhCcCCCCE--------ECCccchhcccCCCCCcCCCHHHHHHHHHhc--------CCCCEEEE
Confidence 3567999999999999999999998 77776 4321 1122333334454444333 34789999
Q ss_pred EeCCCc-HHHHHHHHHHHccCCcEEEecccHHHHHHcCCceecc
Q 008704 360 MDADGT-RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKEL 402 (557)
Q Consensus 360 yC~sG~-RS~~AA~~L~~lGy~nV~vLdGG~~aWkaaGLPV~~~ 402 (557)
||++|. +|.++++.|+ +||++|++|+|| |++ +|++..
T Consensus 67 yc~~g~~~s~~a~~~L~-~G~~~v~~l~GG---W~~--~p~~~~ 104 (230)
T 2eg4_A 67 YDEGLTSRLCRTAFFLG-LGGLEVQLWTEG---WEP--YATEKE 104 (230)
T ss_dssp ECSSSCHHHHHHHHHHH-HTTCCEEEECSS---CGG--GCCBCS
T ss_pred EcCCCCccHHHHHHHHH-cCCceEEEeCCC---Ccc--CcccCC
Confidence 999999 9999999999 999999999999 987 888654
No 59
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.51 E-value=1.9e-14 Score=156.54 Aligned_cols=98 Identities=20% Similarity=0.212 Sum_probs=84.8
Q ss_pred cCCCcccCHHHHHHHHhCCCCeEEEEcCChhhHhhCCCCCccccccccccccCcccccchHHhhhcCchhhhhHHHHHHH
Q 008704 266 GGYSGDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVI 345 (557)
Q Consensus 266 ~g~~g~ISpeea~elL~~~~~avLIDVRs~~Ey~~GHIPGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~L~~ll~alGI 345 (557)
.+....|+++++.++++ ++.+|||||++.||+.||||||+ |+|+.++...+.
T Consensus 485 ~~~~~~i~~~~~~~~~~--~~~~~iDvR~~~e~~~ghi~ga~--------~ip~~~l~~~~~------------------ 536 (588)
T 3ics_A 485 DGFVDTVQWHEIDRIVE--NGGYLIDVREPNELKQGMIKGSI--------NIPLDELRDRLE------------------ 536 (588)
T ss_dssp TTSCCEECTTTHHHHHH--TTCEEEECSCGGGGGGCBCTTEE--------ECCHHHHTTCGG------------------
T ss_pred ccccceecHHHHHHHhc--CCCEEEEcCCHHHHhcCCCCCCE--------ECCHHHHHHHHh------------------
Confidence 44456799999999995 36899999999999999999998 899877654332
Q ss_pred hhhcccCCCCeEEEEeCCCcHHHHHHHHHHHccCCcEEEecccHHHHHHcC
Q 008704 346 RNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEG 396 (557)
Q Consensus 346 ~~LK~~~kd~~VVVyC~sG~RS~~AA~~L~~lGy~nV~vLdGG~~aWkaaG 396 (557)
.++++++||+||++|.||..+++.|+.+||+ |++|+|||.+|+++.
T Consensus 537 ----~l~~~~~iv~~C~~g~rs~~a~~~l~~~G~~-v~~l~GG~~~w~~~~ 582 (588)
T 3ics_A 537 ----EVPVDKDIYITCQLGMRGYVAARMLMEKGYK-VKNVDGGFKLYGTVL 582 (588)
T ss_dssp ----GSCSSSCEEEECSSSHHHHHHHHHHHHTTCC-EEEETTHHHHHHHHC
T ss_pred ----hCCCCCeEEEECCCCcHHHHHHHHHHHcCCc-EEEEcchHHHHHhhh
Confidence 1368899999999999999999999999998 999999999999753
No 60
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.49 E-value=5.1e-15 Score=158.45 Aligned_cols=123 Identities=13% Similarity=0.042 Sum_probs=17.2
Q ss_pred CCCCCCceehhhhhhhHHHHHHHHHHHHhcCCCcc---cC-------HHHHHHHHhCCCCeEEEEcCChhhHhhCCCCCc
Q 008704 237 FDPNDPIVPFVVFLGTSATLWIFYWWWTYGGYSGD---LS-------PKSTLELLRGKENAVLIDVRHEDLRERDGIPDL 306 (557)
Q Consensus 237 ~~~~~pVv~~~v~vg~~~~l~~l~~l~~~~g~~g~---IS-------peea~elL~~~~~avLIDVRs~~Ey~~GHIPGA 306 (557)
+.+++|+|++.- .+....+||.++..||... +. +.-+.++++ +++.+|||||++.||..||||||
T Consensus 333 ~~~~~~vvly~~----~~~a~~a~~~L~~~G~~~v~~~l~g~~~~~~~~~~~~~~~-~~~~~liDvR~~~e~~~ghIpgA 407 (466)
T 3r2u_A 333 LNYDQEINLIGD----YHLVSKATHTLQLIGYDDIAGYQLPQSKIQTRSIHSEDIT-GNESHILDVRNDNEWNNGHLSQA 407 (466)
T ss_dssp CCTTSCEEEESC----HHHHHHHHHHHHTTTCCCEEEEECCC--------------------------------------
T ss_pred cCCCCeEEEEEC----CchHHHHHHHhhhhhcccccccccCcccccHHHHHHHHHh-CCCcEEEEeCCHHHHhcCcCCCC
Confidence 377888875432 2233346677766665421 00 011444553 45789999999999999999999
Q ss_pred cccccccccccCcccccchHHhhhcCchhhhhHHHHHHHhhhcccCCCCeEEEEeCCCcHHHHHHHHHHHccCCcEEEec
Q 008704 307 RRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQ 386 (557)
Q Consensus 307 ~gav~~~~~nIPl~eL~~~l~~ll~n~~~L~~ll~alGI~~LK~~~kd~~VVVyC~sG~RS~~AA~~L~~lGy~nV~vLd 386 (557)
+ |+|+.++...+.. ++++++||+||++|.||..+++.|+.+||++|++|+
T Consensus 408 ~--------~ip~~~l~~~~~~----------------------l~~~~~iv~~C~~G~rs~~a~~~L~~~G~~~v~~l~ 457 (466)
T 3r2u_A 408 V--------HVPHGKLLETDLP----------------------FNKNDVIYVHCQSGIRSSIAIGILEHKGYHNIINVN 457 (466)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred E--------ECCHHHHHHHHhh----------------------CCCCCeEEEECCCChHHHHHHHHHHHcCCCCEEEec
Confidence 9 8998776543221 267899999999999999999999999999999999
Q ss_pred ccHHHHHH
Q 008704 387 GGFQSWVK 394 (557)
Q Consensus 387 GG~~aWka 394 (557)
|||.+|++
T Consensus 458 GG~~~W~~ 465 (466)
T 3r2u_A 458 EGYKDIQL 465 (466)
T ss_dssp --------
T ss_pred ChHHHHhh
Confidence 99999975
No 61
>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4
Probab=99.48 E-value=7.3e-14 Score=128.71 Aligned_cols=116 Identities=16% Similarity=0.244 Sum_probs=79.2
Q ss_pred cccCHHHHHHHHhCC-CCeEEEEcCChhhHhhCCCCCccccccccccccCcccccch-----HHhhhcCchhhhhHHHHH
Q 008704 270 GDLSPKSTLELLRGK-ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGS-----VKKLLRGGRELDDTLTAA 343 (557)
Q Consensus 270 g~ISpeea~elL~~~-~~avLIDVRs~~Ey~~GHIPGA~gav~~~~~nIPl~eL~~~-----l~~ll~n~~~L~~ll~al 343 (557)
..|+++++.+++.+. .+++|||||+++||+.||||||+ |+|+..+... +...+++ ....++.
T Consensus 15 ~~i~~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~gai--------nip~~~~~~~~~~~~l~~~lp~--~~~~~~~-- 82 (157)
T 1whb_A 15 GAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHSL--------SVPEEAISPGVTASWIEAHLPD--DSKDTWK-- 82 (157)
T ss_dssp SEECHHHHHHHHTCSSSCEEEEEESCHHHHHHCCBTTCE--------EECSSSCCTTCCHHHHHHSCCT--THHHHHH--
T ss_pred CccCHHHHHHHHhcCCCCeEEEECCCHHHHHhccccCCc--------ccCHHHccCCCcHHHHHHHCCh--HHHHHHH--
Confidence 579999999999643 27999999999999999999998 8887655321 2222221 1111111
Q ss_pred HHhhhcccCCCCeEEEEeCCCcH----HHHHHHHHHH----c----cCC-cEEEecccHHHHHHcCCceeccCC
Q 008704 344 VIRNLKIVQDRSKVIVMDADGTR----SKGIARSLRK----L----GVM-RAFLVQGGFQSWVKEGLRIKELKS 404 (557)
Q Consensus 344 GI~~LK~~~kd~~VVVyC~sG~R----S~~AA~~L~~----l----Gy~-nV~vLdGG~~aWkaaGLPV~~~~~ 404 (557)
...+...||+||..|.+ +..+++.|.. . ||. +|++|+|||.+|++. +|.....+
T Consensus 83 ------~~~~~~~VVvy~~~~~~~~~~a~~~~~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~~~~~~ 149 (157)
T 1whb_A 83 ------KRGNVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQYTTNA 149 (157)
T ss_dssp ------GGGTSSEEEEECSSCCGGGCCTTCHHHHHHHTTTTTCSSCCCSSCCEEESSCHHHHHHH-CGGGBSCC
T ss_pred ------hcCCCCEEEEECCCCCccccccccHHHHHHHHHHHhccccccCCCeEEEcchHHHHHHH-ChhhhCCC
Confidence 11234569999988764 3445566652 2 454 499999999999985 88876443
No 62
>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4
Probab=99.46 E-value=7.6e-14 Score=129.06 Aligned_cols=114 Identities=18% Similarity=0.249 Sum_probs=77.1
Q ss_pred cccCHHHHHHHHhCC-CCeEEEEcCChhhHhhCCCCCccccccccccccCcccccch-----HHhhhcCchhhhhHHHHH
Q 008704 270 GDLSPKSTLELLRGK-ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGS-----VKKLLRGGRELDDTLTAA 343 (557)
Q Consensus 270 g~ISpeea~elL~~~-~~avLIDVRs~~Ey~~GHIPGA~gav~~~~~nIPl~eL~~~-----l~~ll~n~~~L~~ll~al 343 (557)
..|+++++.+++.+. ++++|||||+++||+.||||||+ |+|+..+... +...++ +....++.
T Consensus 20 ~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~gAi--------nip~~~l~~~~~~~~l~~~lp--~~~~~l~~-- 87 (157)
T 2gwf_A 20 GAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHSL--------SVPEEAISPGVTASWIEAHLP--DDSKDTWK-- 87 (157)
T ss_dssp CEECHHHHHHHHHSTTSCEEEEECSCHHHHHHSCBTTCE--------ECCGGGCCTTCCHHHHHHTSC--HHHHHHHH--
T ss_pred CccCHHHHHHHHhcCCCCeEEEECCCHHHHHhcCccCCc--------ccCHHHcCCCCcHHHHHHHcC--HHHHHHHH--
Confidence 469999999999643 27999999999999999999998 8998665422 212221 11111111
Q ss_pred HHhhhcccCCCCeEEEEeCCCcH----HHHHHHHHH----Hc----cCC-cEEEecccHHHHHHcCCceecc
Q 008704 344 VIRNLKIVQDRSKVIVMDADGTR----SKGIARSLR----KL----GVM-RAFLVQGGFQSWVKEGLRIKEL 402 (557)
Q Consensus 344 GI~~LK~~~kd~~VVVyC~sG~R----S~~AA~~L~----~l----Gy~-nV~vLdGG~~aWkaaGLPV~~~ 402 (557)
...+...||+||.+|.+ +..+++.|. .. |+. +|++|+|||.+|++. +|....
T Consensus 88 ------~~~~~~~VVvy~~~~~~~~~~a~~~l~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~~~~ 152 (157)
T 2gwf_A 88 ------KRGNVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQYTT 152 (157)
T ss_dssp ------TTTTSSEEEEECSSCCGGGCCTTCHHHHHHHHHHTSCCSSCCSSCCEEETTHHHHHHHH-CGGGBS
T ss_pred ------hcCCCCEEEEEcCCCCccccCcccHHHHHHHHHHhhccccccCCceEEEccHHHHHHHH-ChhhcC
Confidence 11244569999988764 234455554 22 454 499999999999984 887653
No 63
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.33 E-value=8e-13 Score=140.91 Aligned_cols=103 Identities=16% Similarity=0.152 Sum_probs=84.1
Q ss_pred CcccCHHHHHHHHhCCCCeEEEEcCChhhHhhCCCCCccccccccccccCccc-ccchHHhhhcCchhhhhHHHHHHHhh
Q 008704 269 SGDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPE-VGGSVKKLLRGGRELDDTLTAAVIRN 347 (557)
Q Consensus 269 ~g~ISpeea~elL~~~~~avLIDVRs~~Ey~~GHIPGA~gav~~~~~nIPl~e-L~~~l~~ll~n~~~L~~ll~alGI~~ 347 (557)
...|+++++.+++.+ + +|||+|++.+|..||||||+ |+|+.. +...+.++
T Consensus 272 ~~~is~~~l~~~l~~--~-~iiD~R~~~~y~~ghIpGA~--------~i~~~~~~~~~~~~l------------------ 322 (474)
T 3tp9_A 272 RVDLPPERVRAWREG--G-VVLDVRPADAFAKRHLAGSL--------NIPWNKSFVTWAGWL------------------ 322 (474)
T ss_dssp ECCCCGGGHHHHHHT--S-EEEECSCHHHHHHSEETTCE--------ECCSSTTHHHHHHHH------------------
T ss_pred CceeCHHHHHHHhCC--C-EEEECCChHHHhccCCCCeE--------EECcchHHHHHHHhc------------------
Confidence 347999999999974 4 99999999999999999998 888753 32222211
Q ss_pred hcccCCCCeEEEEeCCCcHHHHHHHHHHHccCCcEEEecccHHHHHHcCCceeccCC
Q 008704 348 LKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 404 (557)
Q Consensus 348 LK~~~kd~~VVVyC~sG~RS~~AA~~L~~lGy~nV~vLdGG~~aWkaaGLPV~~~~~ 404 (557)
.+++++||+||..|. +.++++.|+.+||++|++|.+|+.+|+.+|+|+.....
T Consensus 323 ---~~~~~~vvvy~~~~~-~~~~~~~L~~~G~~~v~~~l~G~~~W~~~g~~~~~~~~ 375 (474)
T 3tp9_A 323 ---LPADRPIHLLAADAI-APDVIRALRSIGIDDVVDWTDPAAVDRAAPDDVASYAN 375 (474)
T ss_dssp ---CCSSSCEEEECCTTT-HHHHHHHHHHTTCCCEEEEECGGGGTTCCGGGEECCEE
T ss_pred ---CCCCCeEEEEECCCc-HHHHHHHHHHcCCcceEEecCcHHHHHhcccccccccc
Confidence 157889999999887 56699999999999999977799999999999876443
No 64
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=98.81 E-value=3.7e-09 Score=113.14 Aligned_cols=80 Identities=8% Similarity=0.000 Sum_probs=60.7
Q ss_pred CCCeEEEEcCChhhHhhCCCCCccccccccccccCccc-ccchHHhhhcCchhhhhHHHHHHHhhhcccCCCCeEEEEeC
Q 008704 284 KENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPE-VGGSVKKLLRGGRELDDTLTAAVIRNLKIVQDRSKVIVMDA 362 (557)
Q Consensus 284 ~~~avLIDVRs~~Ey~~GHIPGA~gav~~~~~nIPl~e-L~~~l~~ll~n~~~L~~ll~alGI~~LK~~~kd~~VVVyC~ 362 (557)
+++++|||+|++++|..||||||+ |+|+.. +......+ .+++++||+||+
T Consensus 294 ~~~~~ilD~R~~~~y~~gHIpGAv--------~ip~~~~~~~~~~~~---------------------~~~~~~vvly~~ 344 (466)
T 3r2u_A 294 NTNRLTFDLRSKEAYHGGHIEGTI--------NIPYDKNFINQIGWY---------------------LNYDQEINLIGD 344 (466)
T ss_dssp CCCSEEEECSCHHHHHHSCCTTCE--------ECCSSTTHHHHHTTT---------------------CCTTSCEEEESC
T ss_pred CCCeEEEECCCHHHHhhCCCCCcE--------ECCccHHHHHHHHhc---------------------cCCCCeEEEEEC
Confidence 357899999999999999999998 888753 33222211 267899999999
Q ss_pred CCcHHHHHHHHHHHccCCcEEE-ecccHHHHH
Q 008704 363 DGTRSKGIARSLRKLGVMRAFL-VQGGFQSWV 393 (557)
Q Consensus 363 sG~RS~~AA~~L~~lGy~nV~v-LdGG~~aWk 393 (557)
+.++.++++.|+++||++|+. ++|+...|.
T Consensus 345 -~~~a~~a~~~L~~~G~~~v~~~l~g~~~~~~ 375 (466)
T 3r2u_A 345 -YHLVSKATHTLQLIGYDDIAGYQLPQSKIQT 375 (466)
T ss_dssp -HHHHHHHHHHHHTTTCCCEEEEECCC-----
T ss_pred -CchHHHHHHHhhhhhcccccccccCcccccH
Confidence 568999999999999999998 666655544
No 65
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=95.92 E-value=0.0096 Score=54.16 Aligned_cols=104 Identities=12% Similarity=0.071 Sum_probs=56.0
Q ss_pred cccCHHHHHHHHhCCCCeEEEEcCChhhH------------hhC-CCCCccccccccccccCcccccchHHhhhcCchhh
Q 008704 270 GDLSPKSTLELLRGKENAVLIDVRHEDLR------------ERD-GIPDLRRGARFRYASVYLPEVGGSVKKLLRGGREL 336 (557)
Q Consensus 270 g~ISpeea~elL~~~~~avLIDVRs~~Ey------------~~G-HIPGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~L 336 (557)
+.++++++..+.+. .-..|||+|++.|. .+. +|+|.. ++|+.... .+++.+
T Consensus 28 ~~~~~~d~~~L~~~-Gi~~IIdlR~~~E~~~~p~~~~~~~~~~~~gi~~~~--------~iPv~~~~-------~~~~~~ 91 (156)
T 2f46_A 28 PQLTKADAEQIAQL-GIKTIICNRPDREEESQPDFAQIKQWLEQAGVTGFH--------HQPVTARD-------IQKHDV 91 (156)
T ss_dssp SCCCGGGHHHHHHH-TCCEEEECSCTTSSTTCCCHHHHHHHHGGGTCCEEE--------ECCCCTTT-------CCHHHH
T ss_pred CCCCHHHHHHHHHC-CCCEEEECCCCccccCCCcHHHHHHHHHHCCCHhhe--------ECccCCCC-------CCHHHH
Confidence 35788888776542 33689999987662 222 466554 77764321 011122
Q ss_pred hhHHHHHHHhhhcccCCCCeEEEEeCCCcHHHHHHHHH-HHccCCcEEEecccHHHHHHcCCcee
Q 008704 337 DDTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSL-RKLGVMRAFLVQGGFQSWVKEGLRIK 400 (557)
Q Consensus 337 ~~ll~alGI~~LK~~~kd~~VVVyC~sG~RS~~AA~~L-~~lGy~nV~vLdGG~~aWkaaGLPV~ 400 (557)
.+.+..+ . ..+.+|+|||.+|.|+..++..+ ...|.. .+.=+..-+..|+.+.
T Consensus 92 ~~~~~~l--~-----~~~~pVlvHC~sG~Rs~~l~al~l~~~g~~----~~~a~~~~~~~g~~l~ 145 (156)
T 2f46_A 92 ETFRQLI--G-----QAEYPVLAYCRTGTRCSLLWGFRRAAEGMP----VDEIIRRAQAAGVNLE 145 (156)
T ss_dssp HHHHHHH--H-----TSCSSEEEECSSSHHHHHHHHHHHHHTTCC----HHHHHHHHHHTTCCCG
T ss_pred HHHHHHH--H-----hCCCCEEEECCCCCCHHHHHHHHHHHcCCC----HHHHHHHHHHcCCCcH
Confidence 2221111 1 35789999999999887544332 334542 2222334445565443
No 66
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=77.72 E-value=6.2 Score=34.47 Aligned_cols=27 Identities=33% Similarity=0.454 Sum_probs=19.7
Q ss_pred CCCeEEEEeCCCc-HHHH--HHHHHHHccC
Q 008704 353 DRSKVIVMDADGT-RSKG--IARSLRKLGV 379 (557)
Q Consensus 353 kd~~VVVyC~sG~-RS~~--AA~~L~~lGy 379 (557)
.+.+|+|||..|. ||.. +++.+...|.
T Consensus 80 ~~~~VlVHC~~G~~RS~~~v~ayLm~~~~~ 109 (145)
T 2nt2_A 80 HGSKCLVHSKMGVSRSASTVIAYAMKEYGW 109 (145)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHHHCC
T ss_pred cCCeEEEECCCCCchHHHHHHHHHHHHhCC
Confidence 5679999999994 8854 4566666654
No 67
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=77.25 E-value=5.8 Score=34.88 Aligned_cols=27 Identities=30% Similarity=0.417 Sum_probs=19.1
Q ss_pred CCCeEEEEeCCCc-HHHHH--HHHHHHccC
Q 008704 353 DRSKVIVMDADGT-RSKGI--ARSLRKLGV 379 (557)
Q Consensus 353 kd~~VVVyC~sG~-RS~~A--A~~L~~lGy 379 (557)
.+.+|+|||..|. ||..+ +..+...|.
T Consensus 89 ~~~~vlvHC~aG~~RS~~~~~ayl~~~~~~ 118 (154)
T 2r0b_A 89 MGGKVLVHGNAGISRSAAFVIAYIMETFGM 118 (154)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHHTC
T ss_pred cCCCEEEEcCCCCChHHHHHHHHHHHHcCC
Confidence 5679999999995 88753 444555554
No 68
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=76.12 E-value=10 Score=32.84 Aligned_cols=80 Identities=18% Similarity=0.126 Sum_probs=39.7
Q ss_pred CHHHHHHHHhCCCCeEEEEcCChhhHhhCCCCCccccccccccccCcccccchHHhhhcCchhhhhHHHHHHHhhhcccC
Q 008704 273 SPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKIVQ 352 (557)
Q Consensus 273 Speea~elL~~~~~avLIDVRs~~Ey~~GHIPGA~gav~~~~~nIPl~eL~~~l~~ll~n~~~L~~ll~alGI~~LK~~~ 352 (557)
+++++..+.+ ..=..+||+|+..+......+|- .+.++|+.+.... +.+.+.+.+....- ...
T Consensus 24 ~~~~~~~L~~-~gi~~Vi~l~~~~~~~~~~~~~~------~~~~~~~~d~~~~------~~~~~~~~~~~i~~----~~~ 86 (150)
T 4erc_A 24 LPAHYQFLLD-LGVRHLVSLTERGPPHSDSCPGL------TLHRLRIPDFCPP------APDQIDRFVQIVDE----ANA 86 (150)
T ss_dssp SHHHHHHHHH-TTEEEEEECSSSCCTTGGGCTTS------EEEECCCCTTSCC------CHHHHHHHHHHHHH----HHH
T ss_pred CHHHHHHHHH-CCCCEEEEcCCCCCCcccccCCc------eEEEEecCCCCCC------CHHHHHHHHHHHHH----HHH
Confidence 4666655543 33367999999766433333332 1223444332111 11112211111100 013
Q ss_pred CCCeEEEEeCCCc-HHHH
Q 008704 353 DRSKVIVMDADGT-RSKG 369 (557)
Q Consensus 353 kd~~VVVyC~sG~-RS~~ 369 (557)
.+.+|+|||..|. ||..
T Consensus 87 ~~~~vlVHC~~G~~Rsg~ 104 (150)
T 4erc_A 87 RGEAVGVHCALGFGRTGT 104 (150)
T ss_dssp TTCEEEEECSSSSHHHHH
T ss_pred CCCCEEEECCCCCCHHHH
Confidence 5689999999997 8864
No 69
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=71.23 E-value=10 Score=33.88 Aligned_cols=27 Identities=30% Similarity=0.425 Sum_probs=19.7
Q ss_pred CCCeEEEEeCCCc-HHHHH--HHHHHHccC
Q 008704 353 DRSKVIVMDADGT-RSKGI--ARSLRKLGV 379 (557)
Q Consensus 353 kd~~VVVyC~sG~-RS~~A--A~~L~~lGy 379 (557)
.+.+|+|||..|. ||..+ ++.+...|.
T Consensus 88 ~~~~VlVHC~aG~~RSg~~~~ayLm~~~~~ 117 (164)
T 2hcm_A 88 DGGSCLVYCKNGRSRSAAVCTAYLMRHRGH 117 (164)
T ss_dssp TTCEEEEEESSSSHHHHHHHHHHHHHHSCC
T ss_pred cCCEEEEECCCCCchHHHHHHHHHHHHhCC
Confidence 5689999999995 87643 455666664
No 70
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=70.59 E-value=10 Score=33.03 Aligned_cols=27 Identities=22% Similarity=0.059 Sum_probs=19.2
Q ss_pred CCCeEEEEeCCCc-HHHHH--HHHHHHccC
Q 008704 353 DRSKVIVMDADGT-RSKGI--ARSLRKLGV 379 (557)
Q Consensus 353 kd~~VVVyC~sG~-RS~~A--A~~L~~lGy 379 (557)
.+.+|+|||..|. ||..+ +..+...|.
T Consensus 88 ~~~~vlVHC~~G~~Rsg~~~~a~l~~~~~~ 117 (157)
T 3rgo_A 88 LGQCVYVHCKAGRSRSATMVAAYLIQVHNW 117 (157)
T ss_dssp TTCEEEEESSSSSSHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEECCCCCChHHHHHHHHHHHHcCC
Confidence 5679999999998 88754 344444554
No 71
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=68.27 E-value=6.8 Score=34.30 Aligned_cols=27 Identities=26% Similarity=0.205 Sum_probs=19.4
Q ss_pred CCCeEEEEeCCCc-HHHH--HHHHHHHccC
Q 008704 353 DRSKVIVMDADGT-RSKG--IARSLRKLGV 379 (557)
Q Consensus 353 kd~~VVVyC~sG~-RS~~--AA~~L~~lGy 379 (557)
.+.+|+|||..|. ||.. ++..+...|.
T Consensus 84 ~~~~vlVHC~aG~~RSg~~~~ayl~~~~~~ 113 (151)
T 2e0t_A 84 PGGKILVHCAVGVSRSATLVLAYLMLYHHL 113 (151)
T ss_dssp TTCCEEEECSSSSHHHHHHHHHHHHHHSCC
T ss_pred CCCcEEEECCCCCChHHHHHHHHHHHHcCC
Confidence 5789999999995 8763 3445566665
No 72
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=65.97 E-value=13 Score=32.00 Aligned_cols=19 Identities=26% Similarity=0.079 Sum_probs=14.9
Q ss_pred CCCeEEEEeCCCc-HHHHHH
Q 008704 353 DRSKVIVMDADGT-RSKGIA 371 (557)
Q Consensus 353 kd~~VVVyC~sG~-RS~~AA 371 (557)
.+.+|+|||..|. |+..++
T Consensus 88 ~~~~vlVHC~aG~~Rsg~~~ 107 (151)
T 2img_A 88 RGEAVGVHCALGFGRTGTML 107 (151)
T ss_dssp TTCEEEEECSSSSSHHHHHH
T ss_pred CCCcEEEECCCCCChHHHHH
Confidence 5689999999997 776543
No 73
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=65.16 E-value=12 Score=33.54 Aligned_cols=27 Identities=22% Similarity=0.156 Sum_probs=18.8
Q ss_pred CCCeEEEEeCCCc-HHHH--HHHHHHHccC
Q 008704 353 DRSKVIVMDADGT-RSKG--IARSLRKLGV 379 (557)
Q Consensus 353 kd~~VVVyC~sG~-RS~~--AA~~L~~lGy 379 (557)
.+.+|+|||..|. ||.. +|..+...|.
T Consensus 82 ~~~~VlVHC~aG~~RSg~~~~ayLm~~~~~ 111 (165)
T 1wrm_A 82 RGESCLVHCLAGVSRSVTLVIAYIMTVTDF 111 (165)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHTSSC
T ss_pred CCCeEEEECCCCCChhHHHHHHHHHHHcCC
Confidence 5789999999995 8876 3444444443
No 74
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=61.96 E-value=14 Score=32.22 Aligned_cols=27 Identities=19% Similarity=0.226 Sum_probs=19.4
Q ss_pred CCCeEEEEeCCCc-HHHH--HHHHHHHccC
Q 008704 353 DRSKVIVMDADGT-RSKG--IARSLRKLGV 379 (557)
Q Consensus 353 kd~~VVVyC~sG~-RS~~--AA~~L~~lGy 379 (557)
.+.+|+|||..|. ||.. +++++...|.
T Consensus 80 ~~~~VlVHC~~G~sRS~~~v~ayLm~~~~~ 109 (144)
T 3s4e_A 80 KDGVVLVHSNAGVSRAAAIVIGFLMNSEQT 109 (144)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHHCC
T ss_pred cCCeEEEEcCCCCchHHHHHHHHHHHHcCC
Confidence 5678999999997 7654 3455565665
No 75
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=61.72 E-value=25 Score=30.43 Aligned_cols=27 Identities=33% Similarity=0.374 Sum_probs=19.3
Q ss_pred CCCeEEEEeCCCc-HHHH--HHHHHHHccC
Q 008704 353 DRSKVIVMDADGT-RSKG--IARSLRKLGV 379 (557)
Q Consensus 353 kd~~VVVyC~sG~-RS~~--AA~~L~~lGy 379 (557)
.+.+|+|||..|. ||.. ++..+...|.
T Consensus 80 ~~~~VlVHC~~G~~RS~~~~~aylm~~~~~ 109 (144)
T 3ezz_A 80 CRGRVLVHSQAGISRSATICLAYLMMKKRV 109 (144)
T ss_dssp TTCCEEEEESSSSSHHHHHHHHHHHHHHTC
T ss_pred cCCeEEEECCCCCChhHHHHHHHHHHHcCC
Confidence 5679999999997 7753 3445555665
No 76
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A
Probab=60.88 E-value=6 Score=34.65 Aligned_cols=27 Identities=11% Similarity=0.086 Sum_probs=18.8
Q ss_pred CCCeEEEEeCCCc-HHHHHHH-HHHHccC
Q 008704 353 DRSKVIVMDADGT-RSKGIAR-SLRKLGV 379 (557)
Q Consensus 353 kd~~VVVyC~sG~-RS~~AA~-~L~~lGy 379 (557)
.+.+|+|||..|. |+..++. .|...|.
T Consensus 91 ~~~~vlvHC~aG~~RTg~~~a~~l~~~g~ 119 (151)
T 1xri_A 91 KNHPVLIHCKRGKHRTGCLVGCLRKLQKW 119 (151)
T ss_dssp GGCSEEEECSSSSSHHHHHHHHHHHHTTB
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHhCC
Confidence 4679999999997 8866553 3444454
No 77
>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A*
Probab=60.66 E-value=29 Score=34.74 Aligned_cols=27 Identities=22% Similarity=0.217 Sum_probs=20.4
Q ss_pred CCeEEEEeCCCc-HHHHH-HHHHHHccCC
Q 008704 354 RSKVIVMDADGT-RSKGI-ARSLRKLGVM 380 (557)
Q Consensus 354 d~~VVVyC~sG~-RS~~A-A~~L~~lGy~ 380 (557)
+.+++|||..|. |+..+ |-.|..+|..
T Consensus 173 ~~pvl~HC~aGkDRTG~~~alll~~~g~~ 201 (296)
T 1ywf_A 173 GRPVLTHCFAGKDRTGFVVALVLEAVGLD 201 (296)
T ss_dssp TCCEEEECSSSSSHHHHHHHHHHHHTTCC
T ss_pred CCCEEEECCCCCccccHHHHHHHHHcCCC
Confidence 789999999997 77654 4556677764
No 78
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*
Probab=60.25 E-value=19 Score=32.52 Aligned_cols=26 Identities=27% Similarity=0.331 Sum_probs=19.1
Q ss_pred CCeEEEEeCCCc-HHHH--HHHHHHHccC
Q 008704 354 RSKVIVMDADGT-RSKG--IARSLRKLGV 379 (557)
Q Consensus 354 d~~VVVyC~sG~-RS~~--AA~~L~~lGy 379 (557)
+.+|+|||..|. ||.. ++..+...|+
T Consensus 115 ~~~VlVHC~~G~~RSg~~v~ayLm~~~~~ 143 (183)
T 3f81_A 115 NGRVLVHCREGYSRSPTLVIAYLMMRQKM 143 (183)
T ss_dssp TCCEEEECSSSSSHHHHHHHHHHHHHHCC
T ss_pred CCeEEEECCCCcchHHHHHHHHHHHHhCC
Confidence 679999999997 8765 3444556665
No 79
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=59.51 E-value=17 Score=32.29 Aligned_cols=27 Identities=22% Similarity=0.299 Sum_probs=19.3
Q ss_pred CCCeEEEEeCCCc-HHHH--HHHHHHHccC
Q 008704 353 DRSKVIVMDADGT-RSKG--IARSLRKLGV 379 (557)
Q Consensus 353 kd~~VVVyC~sG~-RS~~--AA~~L~~lGy 379 (557)
.+.+|+|||..|. ||.. ++..+...|.
T Consensus 83 ~~~~VlVHC~aG~~RSg~~~~aylm~~~~~ 112 (160)
T 1yz4_A 83 NGGNCLVHSFAGISRSTTIVTAYVMTVTGL 112 (160)
T ss_dssp TTCCEEEEETTSSSHHHHHHHHHHHHHHCC
T ss_pred cCCeEEEECCCCCchHHHHHHHHHHHHcCC
Confidence 5679999999994 8864 3445556665
No 80
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}
Probab=58.60 E-value=22 Score=33.95 Aligned_cols=27 Identities=26% Similarity=0.327 Sum_probs=19.7
Q ss_pred CCCeEEEEeCCCc-HHHH--HHHHHHHccC
Q 008704 353 DRSKVIVMDADGT-RSKG--IARSLRKLGV 379 (557)
Q Consensus 353 kd~~VVVyC~sG~-RS~~--AA~~L~~lGy 379 (557)
.+.+|+|||..|. ||.. ++++++..|+
T Consensus 82 ~~~~VLVHC~aG~sRSgtvv~AYLm~~~g~ 111 (211)
T 2g6z_A 82 KGGKVLVHSEAGISRSPTICMAYLMKTKQF 111 (211)
T ss_dssp TTCCEEEEESSSSSHHHHHHHHHHHHHHCC
T ss_pred cCCeEEEECCCCCCcHHHHHHHHHHHHcCC
Confidence 5789999999995 8764 4566665554
No 81
>1v8c_A MOAD related protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, protein binding; 1.60A {Thermus thermophilus} SCOP: d.15.3.1 d.129.5.1
Probab=51.23 E-value=2.2 Score=39.84 Aligned_cols=25 Identities=12% Similarity=0.045 Sum_probs=21.1
Q ss_pred eEEEEcCChhhHhhCCCCCccccccccccccCccccc
Q 008704 287 AVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVG 323 (557)
Q Consensus 287 avLIDVRs~~Ey~~GHIPGA~gav~~~~~nIPl~eL~ 323 (557)
.++||||++.||. |||. |+|...+.
T Consensus 122 ~~liDvRe~~E~~----pgA~--------~iprg~lE 146 (168)
T 1v8c_A 122 GAVVRFREVEPLK----VGSL--------SIPQLRVE 146 (168)
T ss_dssp TEEEEEEEEEEEE----ETTE--------EEEEEEEE
T ss_pred eEEEECCChhhcC----CCCE--------EcChhHHH
Confidence 4999999999998 9998 88876544
No 82
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens}
Probab=50.84 E-value=23 Score=32.74 Aligned_cols=27 Identities=30% Similarity=0.292 Sum_probs=19.8
Q ss_pred CCCeEEEEeCCCc-HHHH--HHHHHHHccC
Q 008704 353 DRSKVIVMDADGT-RSKG--IARSLRKLGV 379 (557)
Q Consensus 353 kd~~VVVyC~sG~-RS~~--AA~~L~~lGy 379 (557)
.+.+|+|||..|. ||.. +++.+...|.
T Consensus 102 ~~~~VlVHC~aG~~RSgtvv~ayLm~~~~~ 131 (190)
T 2wgp_A 102 KHGATLVHCAAGVSRSATLCIAYLMKFHNV 131 (190)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHHCC
T ss_pred cCCCEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence 5678999999995 8764 3556666665
No 83
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=50.58 E-value=26 Score=32.23 Aligned_cols=27 Identities=19% Similarity=0.320 Sum_probs=19.9
Q ss_pred CCCeEEEEeCCCc-HHHH--HHHHHHHccC
Q 008704 353 DRSKVIVMDADGT-RSKG--IARSLRKLGV 379 (557)
Q Consensus 353 kd~~VVVyC~sG~-RS~~--AA~~L~~lGy 379 (557)
.+.+|+|||..|. ||.. +|..+...|.
T Consensus 96 ~~~~VLVHC~aG~sRS~~vv~ayLm~~~~~ 125 (188)
T 2esb_A 96 KQGRTLLHCAAGVSRSAALCLAYLMKYHAM 125 (188)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHSCC
T ss_pred cCCEEEEECCCCCchHHHHHHHHHHHHcCC
Confidence 5789999999995 8864 3555666665
No 84
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Probab=49.79 E-value=34 Score=31.31 Aligned_cols=27 Identities=11% Similarity=0.122 Sum_probs=18.2
Q ss_pred cccCHHHHHHHHhCCCCeEEEEcCChh
Q 008704 270 GDLSPKSTLELLRGKENAVLIDVRHED 296 (557)
Q Consensus 270 g~ISpeea~elL~~~~~avLIDVRs~~ 296 (557)
+.-+.++..+++.+..--.|||++++.
T Consensus 46 ~~~t~~~~~~~L~~~gi~~Iv~l~~~~ 72 (189)
T 3rz2_A 46 TNATLNKFIEELKKYGVTTIVRVCEAT 72 (189)
T ss_dssp CTTTHHHHHHHHHTTTEEEEEECSCCC
T ss_pred CcccHHHHHHHHHHcCCcEEEEeCCCc
Confidence 345667777777654346799999754
No 85
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=48.87 E-value=32 Score=31.21 Aligned_cols=27 Identities=19% Similarity=0.217 Sum_probs=18.9
Q ss_pred CCCeEEEEeCCCc-HHHHH--HHHHHHccC
Q 008704 353 DRSKVIVMDADGT-RSKGI--ARSLRKLGV 379 (557)
Q Consensus 353 kd~~VVVyC~sG~-RS~~A--A~~L~~lGy 379 (557)
.+.+|+|||..|. ||..+ ++.+...|.
T Consensus 86 ~~~~VlVHC~aG~~RSg~~v~ayLm~~~~~ 115 (177)
T 2oud_A 86 CGKGLLIHCQAGVSRSATIVIAYLMKHTRM 115 (177)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHTSCC
T ss_pred cCCcEEEEcCCCCCchHHHHHHHHHHHcCC
Confidence 5689999999995 88663 344444554
No 86
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=48.82 E-value=20 Score=32.11 Aligned_cols=27 Identities=15% Similarity=0.295 Sum_probs=19.6
Q ss_pred CCCeEEEEeCCCc-HHHH--HHHHHHHccC
Q 008704 353 DRSKVIVMDADGT-RSKG--IARSLRKLGV 379 (557)
Q Consensus 353 kd~~VVVyC~sG~-RS~~--AA~~L~~lGy 379 (557)
.+.+|+|+|..|. ||.. +|+.+...|+
T Consensus 86 ~~~~VlVHC~~G~sRS~~vv~ayLm~~~~~ 115 (161)
T 3emu_A 86 RKEGVLIISGTGVNKAPAIVIAFLMYYQRL 115 (161)
T ss_dssp TTCEEEEEESSSSSHHHHHHHHHHHHHTTC
T ss_pred cCCeEEEEcCCCCcHHHHHHHHHHHHHhCC
Confidence 5679999999997 7643 4555666665
No 87
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A*
Probab=46.94 E-value=40 Score=31.37 Aligned_cols=18 Identities=22% Similarity=0.270 Sum_probs=14.5
Q ss_pred CCCeEEEEeCCCc-HHHHH
Q 008704 353 DRSKVIVMDADGT-RSKGI 370 (557)
Q Consensus 353 kd~~VVVyC~sG~-RS~~A 370 (557)
.+.+|+|||..|. |+..+
T Consensus 132 ~~~~VlVHC~aG~gRTg~~ 150 (212)
T 1fpz_A 132 NYRKTLIHSYGGLGRSCLV 150 (212)
T ss_dssp TTCCEEEECSSSSSHHHHH
T ss_pred CCCCEEEECCCCCCHHHHH
Confidence 5678999999997 77654
No 88
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=45.88 E-value=25 Score=32.68 Aligned_cols=27 Identities=26% Similarity=0.369 Sum_probs=19.5
Q ss_pred CCCeEEEEeCCCc-HHHH--HHHHHHHccC
Q 008704 353 DRSKVIVMDADGT-RSKG--IARSLRKLGV 379 (557)
Q Consensus 353 kd~~VVVyC~sG~-RS~~--AA~~L~~lGy 379 (557)
.+.+|+|||..|. ||.. +|++++..|.
T Consensus 116 ~g~~VLVHC~~G~sRS~tvv~ayLm~~~~~ 145 (182)
T 2j16_A 116 KREKILIHAQCGLSRSATLIIAYIMKYHNL 145 (182)
T ss_dssp TTCCEEEEESSCCSHHHHHHHHHHHHHTTC
T ss_pred cCCeEEEECCCCCChHHHHHHHHHHHHcCC
Confidence 5789999999996 7764 4555565554
No 89
>2jgn_A DBX, DDX3, ATP-dependent RNA helicase DDX3X; phosphorylation, nucleotide-binding, hydrolase, RNA-binding, ATP-binding, DNA-binding, nuclear protein; 1.91A {Homo sapiens}
Probab=40.61 E-value=24 Score=32.17 Aligned_cols=38 Identities=13% Similarity=0.116 Sum_probs=29.4
Q ss_pred CCCCeEEEEeCCCcHHHHHHHHHHHccCCcEEEecccHH
Q 008704 352 QDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQ 390 (557)
Q Consensus 352 ~kd~~VVVyC~sG~RS~~AA~~L~~lGy~nV~vLdGG~~ 390 (557)
.++.++||+|++-..+..++..|...|+ .+..+.|++.
T Consensus 44 ~~~~k~lVF~~~~~~~~~l~~~L~~~g~-~~~~lhg~~~ 81 (185)
T 2jgn_A 44 GKDSLTLVFVETKKGADSLEDFLYHEGY-ACTSIHGDRS 81 (185)
T ss_dssp -CCSCEEEEESCHHHHHHHHHHHHHTTC-CEEEEC----
T ss_pred CCCCeEEEEECCHHHHHHHHHHHHHcCC-ceEEEeCCCC
Confidence 3577899999998888999999999998 6888989864
No 90
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=38.57 E-value=53 Score=32.64 Aligned_cols=45 Identities=18% Similarity=0.183 Sum_probs=32.9
Q ss_pred CeEEEEeCCCc---HHHHHHHHHHHccCCcEEEe-cc---------cHHHHHHcCCcee
Q 008704 355 SKVIVMDADGT---RSKGIARSLRKLGVMRAFLV-QG---------GFQSWVKEGLRIK 400 (557)
Q Consensus 355 ~~VVVyC~sG~---RS~~AA~~L~~lGy~nV~vL-dG---------G~~aWkaaGLPV~ 400 (557)
.+|+|+|..|+ ....+|+.|...|| +|.++ -+ -+..|++.|.++.
T Consensus 80 ~~VlVlcG~GNNGGDGlv~AR~L~~~G~-~V~V~~~~~~~~~~~~~~~~~~~~~g~~~~ 137 (265)
T 2o8n_A 80 PTVLVICGPGNNGGDGLVCARHLKLFGY-QPTIYYPKRPNKPLFTGLVTQCQKMDIPFL 137 (265)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTC-EEEEECCSCCSSHHHHHHHHHHHHTTCCBC
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCC-cEEEEEeCCCCCHHHHHHHHHHHHcCCcEE
Confidence 58999999887 55789999999999 45544 22 1356777777764
No 91
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Probab=38.50 E-value=79 Score=27.37 Aligned_cols=19 Identities=16% Similarity=0.092 Sum_probs=14.7
Q ss_pred CCCeEEEEeCCCc-HHHHHH
Q 008704 353 DRSKVIVMDADGT-RSKGIA 371 (557)
Q Consensus 353 kd~~VVVyC~sG~-RS~~AA 371 (557)
++.+|+|||..|. |+..++
T Consensus 108 ~~~~vlVHC~aG~~RTg~~~ 127 (167)
T 3s4o_A 108 PPPTIGVHCVAGLGRAPILV 127 (167)
T ss_dssp CCCEEEEECSSSSSHHHHHH
T ss_pred CCCcEEEECCCCCCHHHHHH
Confidence 4789999999996 775533
No 92
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=33.23 E-value=73 Score=31.10 Aligned_cols=45 Identities=16% Similarity=0.127 Sum_probs=33.5
Q ss_pred CeEEEEeCCCc---HHHHHHHHHHHccCCcEEEe-cc----------cHHHHHHcCCcee
Q 008704 355 SKVIVMDADGT---RSKGIARSLRKLGVMRAFLV-QG----------GFQSWVKEGLRIK 400 (557)
Q Consensus 355 ~~VVVyC~sG~---RS~~AA~~L~~lGy~nV~vL-dG----------G~~aWkaaGLPV~ 400 (557)
.+|+|+|..|+ ....+|+.|...||+ |.++ -+ -+..|++.|.++.
T Consensus 59 ~~v~VlcG~GNNGGDGlv~AR~L~~~G~~-V~v~~~~~~~~~~~~~~~~~~~~~~g~~~~ 117 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGDGLVCARHLKLFGYN-PVVFYPKRSERTEFYKQLVHQLNFFKVPVL 117 (246)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCC-EEEECCCCCTTCHHHHHHHHHHHHTTCCEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCe-EEEEEcCCCCCCHHHHHHHHHHHHcCCcEE
Confidence 58999999887 557899999999994 5543 22 1457777887765
No 93
>2hjv_A ATP-dependent RNA helicase DBPA; parallel alpha-beta, hydrolase; 1.95A {Bacillus subtilis}
Probab=33.10 E-value=34 Score=30.20 Aligned_cols=37 Identities=16% Similarity=0.292 Sum_probs=31.4
Q ss_pred CCCeEEEEeCCCcHHHHHHHHHHHccCCcEEEecccHH
Q 008704 353 DRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQ 390 (557)
Q Consensus 353 kd~~VVVyC~sG~RS~~AA~~L~~lGy~nV~vLdGG~~ 390 (557)
+..+++++|++-..+...+..|...|+ ++..+.|++.
T Consensus 34 ~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~~hg~~~ 70 (163)
T 2hjv_A 34 NPDSCIIFCRTKEHVNQLTDELDDLGY-PCDKIHGGMI 70 (163)
T ss_dssp CCSSEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTSC
T ss_pred CCCcEEEEECCHHHHHHHHHHHHHcCC-cEEEEeCCCC
Confidence 456899999998889999999999998 6888888753
No 94
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=32.97 E-value=95 Score=28.24 Aligned_cols=81 Identities=16% Similarity=0.206 Sum_probs=43.5
Q ss_pred CCCeEEEEeCCCc----HHHHHHHHHHHccCCcEEEecccHHHHHHcCCceeccCCcchhhhhhhhHHHHHhhhcCcccc
Q 008704 353 DRSKVIVMDADGT----RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKSETALTILNEDAEAILEDINSSPVQ 428 (557)
Q Consensus 353 kd~~VVVyC~sG~----RS~~AA~~L~~lGy~nV~vLdGG~~aWkaaGLPV~~~~~~~~lel~~e~~~~i~~qV~~~~l~ 428 (557)
++.+.|+++.+.. .-...+..|...|| +|..++= ...|..-.........+-+.++..++++.+...++.
T Consensus 44 ~~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~-~v~~~d~-----~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (315)
T 4f0j_A 44 ANGRTILLMHGKNFCAGTWERTIDVLADAGY-RVIAVDQ-----VGFCKSSKPAHYQYSFQQLAANTHALLERLGVARAS 117 (315)
T ss_dssp CCSCEEEEECCTTCCGGGGHHHHHHHHHTTC-EEEEECC-----TTSTTSCCCSSCCCCHHHHHHHHHHHHHHTTCSCEE
T ss_pred CCCCeEEEEcCCCCcchHHHHHHHHHHHCCC-eEEEeec-----CCCCCCCCCCccccCHHHHHHHHHHHHHHhCCCceE
Confidence 3455666665432 22456677888898 6776652 112221111111223333445566667777767788
Q ss_pred hhhhhchhhhH
Q 008704 429 FLGFGVGCFAV 439 (557)
Q Consensus 429 l~G~~~Gl~~~ 439 (557)
++|+-.|...+
T Consensus 118 l~G~S~Gg~~a 128 (315)
T 4f0j_A 118 VIGHSMGGMLA 128 (315)
T ss_dssp EEEETHHHHHH
T ss_pred EEEecHHHHHH
Confidence 88887774433
No 95
>4fak_A Ribosomal RNA large subunit methyltransferase H; alpha/beta methyltransferase rossmann fold, rRNA methylation rRNA, ribosomal protein; HET: SAM PG4; 1.70A {Staphylococcus aureus} PDB: 1vh0_A
Probab=32.96 E-value=53 Score=30.56 Aligned_cols=77 Identities=21% Similarity=0.270 Sum_probs=49.2
Q ss_pred HHhhhcccCCCCeEEEEeCCCc--HHHHHHHHHHH---ccCCcEEEecccHH----HH-HHcCCceeccCCcchhhhhh-
Q 008704 344 VIRNLKIVQDRSKVIVMDADGT--RSKGIARSLRK---LGVMRAFLVQGGFQ----SW-VKEGLRIKELKSETALTILN- 412 (557)
Q Consensus 344 GI~~LK~~~kd~~VVVyC~sG~--RS~~AA~~L~~---lGy~nV~vLdGG~~----aW-kaaGLPV~~~~~~~~lel~~- 412 (557)
|-+-++.++++..+|+.|..|. .|...|..|.. .|..++..+-||-. +. ..+...+.-.+-..|-++++
T Consensus 64 g~~il~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~g~~~i~FvIGG~~Gl~~~v~~rA~~~lSlS~mTfpHqL~Rl 143 (163)
T 4fak_A 64 GQRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSNGLHKDVLQRSNYALSFSKMTFPHQMMRV 143 (163)
T ss_dssp HHHHHHTCCTTSEEEEEEEEEEECCHHHHHHHHHHHHHTTCCEEEEEECBTTBCCHHHHHHCSEEEESCSSCCCHHHHHH
T ss_pred HHHHHHhCCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCcceEEEEECCCccCHHHHHhcCceEEEecCCCCHHHHHH
Confidence 3333455678889999998887 78888888865 57778888889854 22 23455555444445655544
Q ss_pred hhHHHHHh
Q 008704 413 EDAEAILE 420 (557)
Q Consensus 413 e~~~~i~~ 420 (557)
--.+|+.|
T Consensus 144 iL~EQlYR 151 (163)
T 4fak_A 144 VLIEQVYR 151 (163)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 22344444
No 96
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=32.74 E-value=44 Score=32.95 Aligned_cols=30 Identities=17% Similarity=0.191 Sum_probs=24.1
Q ss_pred CeEEEEeCCCc---HHHHHHHHHHHccCCcEEEe
Q 008704 355 SKVIVMDADGT---RSKGIARSLRKLGVMRAFLV 385 (557)
Q Consensus 355 ~~VVVyC~sG~---RS~~AA~~L~~lGy~nV~vL 385 (557)
.+|+++|..|+ ....+|+.|...||+ |.++
T Consensus 86 ~~vlVlcG~GNNGGDGlv~AR~L~~~G~~-V~v~ 118 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQGISCGRHLANHDVQ-VILF 118 (259)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCe-EEEE
Confidence 58999999887 557899999999994 5443
No 97
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=31.60 E-value=42 Score=29.10 Aligned_cols=27 Identities=19% Similarity=0.217 Sum_probs=18.9
Q ss_pred CCCeEEEEeCCCc-HHHHH--HHHHHHccC
Q 008704 353 DRSKVIVMDADGT-RSKGI--ARSLRKLGV 379 (557)
Q Consensus 353 kd~~VVVyC~sG~-RS~~A--A~~L~~lGy 379 (557)
.+.+|+|||..|. ||..+ ++.+...|.
T Consensus 82 ~~~~VlVHC~~G~~RSg~~~~ayl~~~~~~ 111 (149)
T 1zzw_A 82 CGKGLLIHCQAGVSRSATIVIAYLMKHTRM 111 (149)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHHSCC
T ss_pred cCCeEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence 5689999999994 88654 344555554
No 98
>2rb4_A ATP-dependent RNA helicase DDX25; rossmann fold, structural genomics, structural consortium, SGC, alternative initiation, ATP-binding, devel protein; 2.80A {Homo sapiens}
Probab=31.52 E-value=35 Score=30.37 Aligned_cols=36 Identities=14% Similarity=0.196 Sum_probs=31.1
Q ss_pred CCCeEEEEeCCCcHHHHHHHHHHHccCCcEEEecccH
Q 008704 353 DRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGF 389 (557)
Q Consensus 353 kd~~VVVyC~sG~RS~~AA~~L~~lGy~nV~vLdGG~ 389 (557)
+..++|++|++-..+...+..|...|+ .+..+.|++
T Consensus 33 ~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~~~g~~ 68 (175)
T 2rb4_A 33 TIGQAIIFCQTRRNAKWLTVEMIQDGH-QVSLLSGEL 68 (175)
T ss_dssp CCSEEEEECSCHHHHHHHHHHHHTTTC-CEEEECSSC
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHcCC-cEEEEeCCC
Confidence 457899999998888999999999998 688888874
No 99
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=31.01 E-value=48 Score=35.86 Aligned_cols=48 Identities=15% Similarity=0.157 Sum_probs=35.6
Q ss_pred CCCeEEEEeCCCc---HHHHHHHHHHHccCC-cEEEeccc--------HHHHHHcCCcee
Q 008704 353 DRSKVIVMDADGT---RSKGIARSLRKLGVM-RAFLVQGG--------FQSWVKEGLRIK 400 (557)
Q Consensus 353 kd~~VVVyC~sG~---RS~~AA~~L~~lGy~-nV~vLdGG--------~~aWkaaGLPV~ 400 (557)
+..+|+|+|..|+ ....+|+.|...||+ .|+.+... +..|++.|.++.
T Consensus 51 ~~~~v~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~g~~~~ 110 (502)
T 3rss_A 51 SDYRFLVLCGGGNNGGDGFVVARNLLGVVKDVLVVFLGKKKTPDCEYNYGLYKKFGGKVV 110 (502)
T ss_dssp TTCEEEEEECSSHHHHHHHHHHHHHTTTSSEEEEEECCSSCCHHHHHHHHHHHHTTCCEE
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEECCCCCHHHHHHHHHHHhCCCcee
Confidence 4678999999887 557788999999994 33333321 568888898876
No 100
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=29.70 E-value=76 Score=31.55 Aligned_cols=27 Identities=15% Similarity=0.207 Sum_probs=18.6
Q ss_pred CCCeEEEEeCCCc-HHHH--HHHHHHHccC
Q 008704 353 DRSKVIVMDADGT-RSKG--IARSLRKLGV 379 (557)
Q Consensus 353 kd~~VVVyC~sG~-RS~~--AA~~L~~lGy 379 (557)
.+.+|+|||..|. ||.. +|.++...|.
T Consensus 105 ~g~~VLVHC~aG~sRS~tvv~ayLm~~~g~ 134 (294)
T 3nme_A 105 NGGVTYVHSTAGMGRAPAVALTYMFWVQGY 134 (294)
T ss_dssp HCSEEEEECSSSSSHHHHHHHHHHHHTSCC
T ss_pred CCCEEEEECCCCCchhHHHHHHHHHHHhCC
Confidence 3578999999997 7654 3444555565
No 101
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=29.64 E-value=52 Score=33.32 Aligned_cols=45 Identities=13% Similarity=0.097 Sum_probs=31.7
Q ss_pred CeEEEEeCCCc---HHHHHHHHHHHccCCcEEEe-ccc----------HHHHHHcCCcee
Q 008704 355 SKVIVMDADGT---RSKGIARSLRKLGVMRAFLV-QGG----------FQSWVKEGLRIK 400 (557)
Q Consensus 355 ~~VVVyC~sG~---RS~~AA~~L~~lGy~nV~vL-dGG----------~~aWkaaGLPV~ 400 (557)
.+|+|+|..|+ ....+|+.|...|| +|.++ -|. +..|+..|.++.
T Consensus 133 ~~vlVlcG~GNNGGDGlv~AR~L~~~G~-~V~V~~~~~~~~~~~a~~~~~~~~~~g~~~~ 191 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQGISCGRHLANHDV-QVILFLPNFVKMLESITNELSLFSKTQGQQV 191 (306)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTC-EEEEECCCCSSCCHHHHHHHHHHHTSSCEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCC-cEEEEEecCCCCCHHHHHHHHHHHHcCCccc
Confidence 58999999887 55789999999999 45544 221 345666676654
No 102
>1t5i_A C_terminal domain of A probable ATP-dependent RNA helicase; RECA-like fold, PRE-mRNA processing protein; 1.90A {Homo sapiens} SCOP: c.37.1.19
Probab=29.58 E-value=41 Score=30.09 Aligned_cols=36 Identities=17% Similarity=0.277 Sum_probs=31.1
Q ss_pred CCCeEEEEeCCCcHHHHHHHHHHHccCCcEEEecccH
Q 008704 353 DRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGF 389 (557)
Q Consensus 353 kd~~VVVyC~sG~RS~~AA~~L~~lGy~nV~vLdGG~ 389 (557)
+..++|++|++-..+..++..|...|+ ++..+.|++
T Consensus 30 ~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~~hg~~ 65 (172)
T 1t5i_A 30 EFNQVVIFVKSVQRCIALAQLLVEQNF-PAIAIHRGM 65 (172)
T ss_dssp CCSSEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTS
T ss_pred CCCcEEEEECCHHHHHHHHHHHHhcCC-CEEEEECCC
Confidence 456899999998889999999999998 678888875
No 103
>1fuk_A Eukaryotic initiation factor 4A; helicase, DEAD-box protein, translation; 1.75A {Saccharomyces cerevisiae} SCOP: c.37.1.19
Probab=28.84 E-value=48 Score=29.19 Aligned_cols=36 Identities=6% Similarity=0.135 Sum_probs=30.8
Q ss_pred CCCeEEEEeCCCcHHHHHHHHHHHccCCcEEEecccH
Q 008704 353 DRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGF 389 (557)
Q Consensus 353 kd~~VVVyC~sG~RS~~AA~~L~~lGy~nV~vLdGG~ 389 (557)
+..+++++|++-..+...+..|...|+ .+..+.|++
T Consensus 29 ~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~~~~~~ 64 (165)
T 1fuk_A 29 SVTQAVIFCNTRRKVEELTTKLRNDKF-TVSAIYSDL 64 (165)
T ss_dssp TCSCEEEEESSHHHHHHHHHHHHHTTC-CEEEECTTS
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHcCC-CEEEEECCC
Confidence 456899999998888999999999998 678888875
No 104
>2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR}
Probab=28.33 E-value=1.1e+02 Score=28.05 Aligned_cols=19 Identities=32% Similarity=0.377 Sum_probs=14.8
Q ss_pred CCCeEEEEeCCCc-HHHHHH
Q 008704 353 DRSKVIVMDADGT-RSKGIA 371 (557)
Q Consensus 353 kd~~VVVyC~sG~-RS~~AA 371 (557)
.+.+|+|+|..|. |+..++
T Consensus 124 ~~~~VlVHC~aG~~RSg~~v 143 (195)
T 2q05_A 124 RNEPVLVHCAAGVNRSGAMI 143 (195)
T ss_dssp TTCCEEEECSSSSSHHHHHH
T ss_pred cCCcEEEEcCCCCChHHHHH
Confidence 5678999999995 876543
No 105
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=26.82 E-value=81 Score=27.54 Aligned_cols=43 Identities=19% Similarity=0.265 Sum_probs=34.1
Q ss_pred CCCCeEEEEeCCCcHHHHHHHHHHHccCCcEEEecccHHHHHH
Q 008704 352 QDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVK 394 (557)
Q Consensus 352 ~kd~~VVVyC~sG~RS~~AA~~L~~lGy~nV~vLdGG~~aWka 394 (557)
+++-+|.+++++..........|+..||..|..-..|..+|..
T Consensus 10 ~k~~rILiVDD~~~~r~~l~~~L~~~G~~~v~~a~~g~~al~~ 52 (134)
T 3to5_A 10 NKNMKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALPM 52 (134)
T ss_dssp CTTCCEEEECSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHH
T ss_pred CCCCEEEEEeCCHHHHHHHHHHHHHcCCcEEEEECCHHHHHHH
Confidence 4566788888877666678888999999888888888887764
No 106
>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A
Probab=25.48 E-value=1.1e+02 Score=27.34 Aligned_cols=27 Identities=30% Similarity=0.300 Sum_probs=18.2
Q ss_pred CCCeEEEEeCCCc-HHHHH--HHHHHHccC
Q 008704 353 DRSKVIVMDADGT-RSKGI--ARSLRKLGV 379 (557)
Q Consensus 353 kd~~VVVyC~sG~-RS~~A--A~~L~~lGy 379 (557)
.+.+|+|||..|. ||..+ +..+...|.
T Consensus 107 ~~~~VlVHC~aG~~RSg~~v~aylm~~~~~ 136 (176)
T 3cm3_A 107 RNEPVLVHSAAGVNRSGAMILAYLMSKNKE 136 (176)
T ss_dssp HTCCEEEECSSSSSHHHHHHHHHHHHHCCS
T ss_pred CCCcEEEECCcCCCHHHHHHHHHHHHHhCC
Confidence 4678999999995 77643 344455454
No 107
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=25.16 E-value=61 Score=28.56 Aligned_cols=27 Identities=30% Similarity=0.393 Sum_probs=19.0
Q ss_pred CCCeEEEEeCCCc-HHHHH--HHHHHHccC
Q 008704 353 DRSKVIVMDADGT-RSKGI--ARSLRKLGV 379 (557)
Q Consensus 353 kd~~VVVyC~sG~-RS~~A--A~~L~~lGy 379 (557)
.+.+|+|+|..|. ||..+ +..+...|.
T Consensus 84 ~~~~VlVHC~~G~~RS~~vv~ayLm~~~~~ 113 (155)
T 2hxp_A 84 QNCGVLVHSLAGVSRSVTVTVAYLMQKLHL 113 (155)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHHHTC
T ss_pred cCCcEEEECCCCCchhHHHHHHHHHHHcCC
Confidence 5679999999994 88643 444555554
No 108
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A
Probab=25.13 E-value=1.3e+02 Score=30.70 Aligned_cols=19 Identities=16% Similarity=0.302 Sum_probs=14.9
Q ss_pred CCCCeEEEEeCCCc-HHHHH
Q 008704 352 QDRSKVIVMDADGT-RSKGI 370 (557)
Q Consensus 352 ~kd~~VVVyC~sG~-RS~~A 370 (557)
.++.+|+|||..|. |+..+
T Consensus 267 ~~~~~VLVHC~aG~gRTGtv 286 (348)
T 1ohe_A 267 NAEGAIAVHSKAGLGRTGTL 286 (348)
T ss_dssp SCSSEEEEECSSSSHHHHHH
T ss_pred hCCCcEEEECCCCCChHHHH
Confidence 46789999999995 77543
No 109
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=24.95 E-value=60 Score=31.27 Aligned_cols=34 Identities=15% Similarity=0.230 Sum_probs=26.6
Q ss_pred CCCeEEEEeCCCcHHHHHHHHHHHccCCcEEEec
Q 008704 353 DRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQ 386 (557)
Q Consensus 353 kd~~VVVyC~sG~RS~~AA~~L~~lGy~nV~vLd 386 (557)
.+-.+++.|-....+..++..|..+|.+.++++.
T Consensus 147 ~~Id~vIIAvPs~~aq~v~d~lv~~GIk~I~nFa 180 (212)
T 3keo_A 147 SDIETAILTVPSTEAQEVADILVKAGIKGILSFS 180 (212)
T ss_dssp CSCCEEEECSCGGGHHHHHHHHHHHTCCEEEECS
T ss_pred cCCCEEEEecCchhHHHHHHHHHHcCCCEEEEcC
Confidence 3456888886666677899999999998877764
No 110
>3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis}
Probab=23.29 E-value=1.6e+02 Score=25.99 Aligned_cols=75 Identities=15% Similarity=0.137 Sum_probs=40.5
Q ss_pred CeEEEEeCCCc------HHHHHHHHHHHccCCcEEEecccHHHHHHcCCceeccCCcchhhhhhhhHHHHHhhhcCcccc
Q 008704 355 SKVIVMDADGT------RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKSETALTILNEDAEAILEDINSSPVQ 428 (557)
Q Consensus 355 ~~VVVyC~sG~------RS~~AA~~L~~lGy~nV~vLdGG~~aWkaaGLPV~~~~~~~~lel~~e~~~~i~~qV~~~~l~ 428 (557)
.++|+++.+.. .....+..|...|| +|+.++- ...|..-.. ......+-+-++..++++.+...++.
T Consensus 37 ~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~-~v~~~d~-----~G~G~s~~~-~~~~~~~~~~~d~~~~~~~l~~~~~~ 109 (270)
T 3llc_A 37 RPTCIWLGGYRSDMTGTKALEMDDLAASLGV-GAIRFDY-----SGHGASGGA-FRDGTISRWLEEALAVLDHFKPEKAI 109 (270)
T ss_dssp SCEEEEECCTTCCTTSHHHHHHHHHHHHHTC-EEEEECC-----TTSTTCCSC-GGGCCHHHHHHHHHHHHHHHCCSEEE
T ss_pred CCeEEEECCCccccccchHHHHHHHHHhCCC-cEEEecc-----ccCCCCCCc-cccccHHHHHHHHHHHHHHhccCCeE
Confidence 56666665432 12346677778899 6776652 111211101 11122333344556667777777888
Q ss_pred hhhhhchh
Q 008704 429 FLGFGVGC 436 (557)
Q Consensus 429 l~G~~~Gl 436 (557)
++|+-.|.
T Consensus 110 l~G~S~Gg 117 (270)
T 3llc_A 110 LVGSSMGG 117 (270)
T ss_dssp EEEETHHH
T ss_pred EEEeChHH
Confidence 88888773
No 111
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=22.57 E-value=1.6e+02 Score=26.08 Aligned_cols=79 Identities=11% Similarity=0.077 Sum_probs=41.2
Q ss_pred CCCeEEEEeCCCc----HHHHHHHHHHHccCCcEEEecccHHHHHHcCCceeccCCcchhhhhhhhHHHHHhhh-cCccc
Q 008704 353 DRSKVIVMDADGT----RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKSETALTILNEDAEAILEDI-NSSPV 427 (557)
Q Consensus 353 kd~~VVVyC~sG~----RS~~AA~~L~~lGy~nV~vLdGG~~aWkaaGLPV~~~~~~~~lel~~e~~~~i~~qV-~~~~l 427 (557)
.+++.|+++.+.. .-...+..|...|| +|+.++= ...|.--.........+-+-++..++++.+ ...+.
T Consensus 10 ~~~~~vvllHG~~~~~~~~~~~~~~l~~~g~-~v~~~D~-----~G~G~S~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ 83 (267)
T 3sty_A 10 FVKKHFVLVHAAFHGAWCWYKIVALMRSSGH-NVTALDL-----GASGINPKQALQIPNFSDYLSPLMEFMASLPANEKI 83 (267)
T ss_dssp CCCCEEEEECCTTCCGGGGHHHHHHHHHTTC-EEEEECC-----TTSTTCSCCGGGCCSHHHHHHHHHHHHHTSCTTSCE
T ss_pred CCCCeEEEECCCCCCcchHHHHHHHHHhcCC-eEEEecc-----ccCCCCCCcCCccCCHHHHHHHHHHHHHhcCCCCCE
Confidence 4455666665432 22356667788898 6777751 111211111111123333345555666666 35678
Q ss_pred chhhhhchhh
Q 008704 428 QFLGFGVGCF 437 (557)
Q Consensus 428 ~l~G~~~Gl~ 437 (557)
.++|+-.|..
T Consensus 84 ~lvGhS~Gg~ 93 (267)
T 3sty_A 84 ILVGHALGGL 93 (267)
T ss_dssp EEEEETTHHH
T ss_pred EEEEEcHHHH
Confidence 8888888733
No 112
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=22.39 E-value=64 Score=27.55 Aligned_cols=28 Identities=14% Similarity=0.235 Sum_probs=18.6
Q ss_pred CCCeEEEEeCCCcHHHH-HHHHH----HHccCC
Q 008704 353 DRSKVIVMDADGTRSKG-IARSL----RKLGVM 380 (557)
Q Consensus 353 kd~~VVVyC~sG~RS~~-AA~~L----~~lGy~ 380 (557)
+-.+|++.|.+|..+.. ++..| ...|+.
T Consensus 20 ~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~ 52 (113)
T 1tvm_A 20 SKRKIIVACGGAVATSTMAAEEIKELCQSHNIP 52 (113)
T ss_dssp SSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCC
T ss_pred cccEEEEECCCCHHHHHHHHHHHHHHHHHcCCe
Confidence 34579999999995443 55554 455663
No 113
>3eaq_A Heat resistant RNA dependent ATPase; DEAD box RNA helicase, dimer, ATP-binding, helicase, hydrolase, nucleotide-binding; 2.30A {Thermus thermophilus} PDB: 3ear_A 3eas_A
Probab=22.36 E-value=66 Score=29.83 Aligned_cols=37 Identities=22% Similarity=0.385 Sum_probs=31.4
Q ss_pred CCCeEEEEeCCCcHHHHHHHHHHHccCCcEEEecccHH
Q 008704 353 DRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQ 390 (557)
Q Consensus 353 kd~~VVVyC~sG~RS~~AA~~L~~lGy~nV~vLdGG~~ 390 (557)
+..+++|+|++-..+...+..|...|+ .+..+.|++.
T Consensus 30 ~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~lhg~~~ 66 (212)
T 3eaq_A 30 SPDRAMVFTRTKAETEEIAQGLLRLGH-PAQALHGDLS 66 (212)
T ss_dssp CCSCEEEECSSHHHHHHHHHHHHHHTC-CEEEECSSSC
T ss_pred CCCeEEEEeCCHHHHHHHHHHHHHcCC-CEEEEECCCC
Confidence 467899999988888889999999998 6888889853
No 114
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=22.10 E-value=1.8e+02 Score=25.64 Aligned_cols=79 Identities=11% Similarity=0.157 Sum_probs=41.9
Q ss_pred CCCeEEEEeCCCc----HHHHHHHHHHHccCCcEEEecccHHHHHHcCCceecc-CCcchhhhhhhhHHHHHhhhcCccc
Q 008704 353 DRSKVIVMDADGT----RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKEL-KSETALTILNEDAEAILEDINSSPV 427 (557)
Q Consensus 353 kd~~VVVyC~sG~----RS~~AA~~L~~lGy~nV~vLdGG~~aWkaaGLPV~~~-~~~~~lel~~e~~~~i~~qV~~~~l 427 (557)
++.+.|+++.+.. .-...+..|...|| +|+.++- ...|..-... ......+-+.++..++++.+...++
T Consensus 24 ~~~~~vv~~hG~~~~~~~~~~~~~~l~~~G~-~v~~~d~-----~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (286)
T 3qit_A 24 PEHPVVLCIHGILEQGLAWQEVALPLAAQGY-RVVAPDL-----FGHGRSSHLEMVTSYSSLTFLAQIDRVIQELPDQPL 97 (286)
T ss_dssp TTSCEEEEECCTTCCGGGGHHHHHHHHHTTC-EEEEECC-----TTSTTSCCCSSGGGCSHHHHHHHHHHHHHHSCSSCE
T ss_pred CCCCEEEEECCCCcccchHHHHHHHhhhcCe-EEEEECC-----CCCCCCCCCCCCCCcCHHHHHHHHHHHHHhcCCCCE
Confidence 3445666665432 22456677888898 6777652 1112211110 0112233334555666777766678
Q ss_pred chhhhhchhh
Q 008704 428 QFLGFGVGCF 437 (557)
Q Consensus 428 ~l~G~~~Gl~ 437 (557)
.++|+-.|..
T Consensus 98 ~l~G~S~Gg~ 107 (286)
T 3qit_A 98 LLVGHSMGAM 107 (286)
T ss_dssp EEEEETHHHH
T ss_pred EEEEeCHHHH
Confidence 8888877743
No 115
>2i4i_A ATP-dependent RNA helicase DDX3X; DEAD, structural genomics, SGC, structural GE consortium, hydrolase; HET: AMP; 2.20A {Homo sapiens}
Probab=20.81 E-value=81 Score=31.28 Aligned_cols=37 Identities=14% Similarity=0.117 Sum_probs=32.0
Q ss_pred CCCCeEEEEeCCCcHHHHHHHHHHHccCCcEEEecccH
Q 008704 352 QDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGF 389 (557)
Q Consensus 352 ~kd~~VVVyC~sG~RS~~AA~~L~~lGy~nV~vLdGG~ 389 (557)
.++.+++++|++-..+...+..|...|+ ++..+.|++
T Consensus 274 ~~~~~~lVf~~~~~~~~~l~~~L~~~~~-~~~~~h~~~ 310 (417)
T 2i4i_A 274 GKDSLTLVFVETKKGADSLEDFLYHEGY-ACTSIHGDR 310 (417)
T ss_dssp CTTCEEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTS
T ss_pred CCCCeEEEEECCHHHHHHHHHHHHHCCC-CeeEecCCC
Confidence 4678899999998888899999999998 688888875
No 116
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Probab=20.39 E-value=78 Score=29.94 Aligned_cols=27 Identities=30% Similarity=0.326 Sum_probs=19.5
Q ss_pred CCCeEEEEeCCCc-HHHH--HHHHHHHccC
Q 008704 353 DRSKVIVMDADGT-RSKG--IARSLRKLGV 379 (557)
Q Consensus 353 kd~~VVVyC~sG~-RS~~--AA~~L~~lGy 379 (557)
.+.+|+|||..|. ||.. +|+++...|+
T Consensus 138 ~~~~VLVHC~aG~sRS~tvv~aYLm~~~~~ 167 (219)
T 2y96_A 138 DHSKILVHCVMGRSRSATLVLAYLMIHKDM 167 (219)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHSCC
T ss_pred cCCeEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence 5679999999995 8764 3445666554
Done!