Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>008706
MGVLRESWCFCKGVSKTERMKAAIFSGKGLAMARISVAASAVSGTGFLIHRNLLLTTHVN
LPSVAAAETAEIRLQNGVAAALVPHRFFITSSVLDLTIVGLDSADGDSNAPGQQPHHLKT
CSKPNLDLGSIVYLLGYMEEKELMVGEGKVAIATDNLIKLSTDGIIWSPGSAGFDVQGNL
AFMICDPMKLATSPNTKSSSTSSSSSSSWKKDSSMQFGIPIPIICDWLNQHWEGNLDELT
KPKLPIIRLMSTGQKSEHSCASFTMRQVFKSTDDGNERTPSSSNIFSKARDQTGPGCSAG
VSIREEETLSMDPHATHVQGIPTPEIYESPKLTSVPIQKKASSQIQLLDINFPPRVAKPM
VSLKPLKRLSLNSDDNCDNEPHPDSPPREEDEIKDRGLISPNAEAENADIASTGSVNGVQ
SEVQSSSSPVEVLGMYNGYSSEGETTMYSAETAESRNYTIPREGKFQQVGRSQSCVGYNR
WGDVQRNSMPRQTLTEKQSSLIHGKKMYSQGATSQRSNDHYFSPTVSSIMKKRNNSEQPR
PSKPRPSAVHSSPRWMF

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  008706
        (557 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2098490 - symbol:AT3G07210 "AT3G07210" species...  1273  9.3e-130  1


>TAIR|locus:2098490 [details] [associations]
            symbol:AT3G07210 "AT3G07210" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR009003 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0003824 GO:GO:0008152
            SUPFAM:SSF50494 EMBL:AC012395 EMBL:AY034980 EMBL:AY074530
            EMBL:AY086322 IPI:IPI00548333 RefSeq:NP_566301.1 UniGene:At.18708
            ProteinModelPortal:Q9SFV1 IntAct:Q9SFV1 EnsemblPlants:AT3G07210.1
            GeneID:819909 KEGG:ath:AT3G07210 TAIR:At3g07210 eggNOG:NOG253486
            HOGENOM:HOG000242930 InParanoid:Q9SFV1 OMA:FLIHRNL PhylomeDB:Q9SFV1
            ProtClustDB:CLSN2688141 ArrayExpress:Q9SFV1 Genevestigator:Q9SFV1
            Uniprot:Q9SFV1
        Length = 547

 Score = 1273 (453.2 bits), Expect = 9.3e-130, P = 9.3e-130
 Identities = 292/571 (51%), Positives = 357/571 (62%)

Query:     1 MGVLRESWCFCKGVSKTERMKAAIFSGKGLAMARISVAA--SAVSGTGFLIHRNLLLTTH 58
             MGV+ +SWCFCKGV K+E+MK +IF+GK  AMARISV+      SGTGFLIHRNLLLTTH
Sbjct:     1 MGVILDSWCFCKGVGKSEKMKGSIFTGKAPAMARISVSGPNGVTSGTGFLIHRNLLLTTH 60

Query:    59 VNLPSVAAAETAEIRLQNGVAAALVPHRFFITSSVLDLTIVGLDSADGDSNAPGQ---QP 115
             +NLPS++A ETAE+RLQNGVAAAL PHRFFITSSV+DLTIVGLD  DGDS++  Q   QP
Sbjct:    61 LNLPSISATETAEVRLQNGVAAALFPHRFFITSSVIDLTIVGLDLVDGDSSSQSQLQQQP 120

Query:   116 HHLKTCSKPNLDLGSIVYLLGYMEEKELMVGEGKVAIATDNLIKLSTDGIIWSPGSAGFD 175
             H+LKTCSKPNLDLGS+VYLLGY  + EL +GEGK+ +ATDNLIKLSTD +IWSPGSAGFD
Sbjct:   121 HYLKTCSKPNLDLGSVVYLLGYANQNELKIGEGKLVVATDNLIKLSTDEMIWSPGSAGFD 180

Query:   176 VQGNLAFMICDPMKLAXXXXXXXXXXXXXXXXXXXXXXXMQFGIPIPIICDWLNQHWEGN 235
             VQGNLAFMICDP KL+                       MQFGIPIP+ICDWLNQHWEG+
Sbjct:   181 VQGNLAFMICDPRKLSTSPTSTSSSSSSSLKKDNNKTLMMQFGIPIPVICDWLNQHWEGS 240

Query:   236 LDELTKPKLPIIRLMSTGQKSEHSCASFTMRQVFKSTDDGNERTPSSSNIFSKARDQTGP 295
             LDE T    P + L+      + S  S T   + +     N+     +   S  RDQT P
Sbjct:   241 LDEHTTK--PKLPLIRLMSSGQKSERSCTSFTM-RRVFKPNDSADVGTPSSSNTRDQTHP 297

Query:   296 GCS-AGVSIREEETLSMDPHATHVQGIPT-PEIYESPKLTSVPIQKKASSQIQLLDINFP 353
               S A    +EEET   +P    V G  T  +   +P++   P  K  S  ++    N  
Sbjct:   298 SSSIAAEEEKEEETSKTNPQ---VCGTTTHAQGIPTPEIYESP--KLTSGPLR----NET 348

Query:   354 PRVAKPMVSLKPLKRLSLNSDDNCDNEPHPDSPPREEDEIKDRGLISPNAEAENADIAST 413
              +V    ++  P    ++          HP+    + + I +   I   +E  +A IAST
Sbjct:   349 AQVHLLDINFPPRIPKAITF--------HPELNSLQSNHIVEEAEIV--SEGSDAQIAST 398

Query:   414 XXXXXXXXXXXXXXXXXXXLGMYN--GYSSEGETTMYSAETAESRNY-TIPREGKF--QQ 468
                                  +YN  GYSSE E TMYSAETAESRNY T PR+ +F  ++
Sbjct:   399 GSVNGALSEVISSSPPAAAHYVYNNHGYSSE-EETMYSAETAESRNYPTPPRKSEFHHER 457

Query:   469 VGRSQSCVGYNRWGDVQRNSMPRQTLTEKQSSLIHGKKMYSQGATSQRSNDHYFSPTVSS 528
             VGRSQSCV  +RWG  Q++   R+ + EKQ S +HGKKM+SQGA SQRSND Y+SPTVSS
Sbjct:   458 VGRSQSCVSSSRWGTPQKSLNGRREMLEKQRSFVHGKKMHSQGAMSQRSND-YYSPTVSS 516

Query:   529 IMKKRNNSEQPRPSKP--RPSAVHSSPRWMF 557
             IMKKR NS + +  KP  RP AV SSPRW F
Sbjct:   517 IMKKRINSSEQQIIKPVPRPRAVSSSPRWAF 547


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.130   0.383    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      557       515   0.00088  119 3  11 23  0.44    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  621 (66 KB)
  Total size of DFA:  303 KB (2156 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  47.80u 0.11s 47.91t   Elapsed:  00:00:03
  Total cpu time:  47.81u 0.11s 47.92t   Elapsed:  00:00:03
  Start:  Tue May 21 12:26:46 2013   End:  Tue May 21 12:26:49 2013

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